RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ANHX (Homo sapiens)

Ensembl gene IDs: ENSG00000227059

Ensembl transcript IDs: ENST00000419717.3, ENST00000545940.6, ENST00000673940.1

Found 298 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGCAGCAGAACACTCCCCTCTCTAGAATGGCCTTCTCTGCACGAGTaGCCCGGAGCCCGACTGATCCAGTGCTGCGTGAGTGGGACAGAC +
Preference number: 1 (lower is better)
Translates to: SSRTLPSLEWPSLHE*PGARLIQCCVSGTD
Trigger: GTCTGTCCCACTCACGCAGCACTGGATCAGTCGGGCTCCGGGGCACTCGTGCAGAGAAGGCCATTCTAGAGAGGGGAGTGTTCTGCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
3UTR GCA 90 bp TGGCCTTCTCTGCACGAGTGCCCCGGAGCCCGACTGATCCAGTGCTaGGTGAGTGGGACAGACCCACCTTTGACTTCTGATCTCACGAAC +
Preference number: 1 (lower is better)
Translates to: WPSLHECPGARLIQC*VSGTDPPLTSDLTN
Trigger: GTTCGTGAGATCAGAAGTCAAAGGTGGGTCTGTCCCACTCACGCAGCACTGGATCAGTCGGGCTCCGGGGCACTCGTGCAGAGAAGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
3UTR GCA 90 bp GAATGGCCTTCTCTGCACGAGTGCCCCGGAGCCCGACTGATCCAGTaGTGCGTGAGTGGGACAGACCCACCTTTGACTTCTGATCTCACG +
Preference number: 1 (lower is better)
Translates to: EWPSLHECPGARLIQ*CVSGTDPPLTSDLT
Trigger: CGTGAGATCAGAAGTCAAAGGTGGGTCTGTCCCACTCACGCAGCACTGGATCAGTCGGGCTCCGGGGCACTCGTGCAGAGAAGGCCATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
3UTR GCA 90 bp CACAGTGAATTACAACCTGGAGGGAAAATCCACCCTACTCTGCCCTaGCTAGGCCATTCGCAGACAGGTTTGCCTCCCAGTACTCAAGGG +
Preference number: 1 (lower is better)
Translates to: HSELQPGGKIHPTLP*LGHSQTGLPPSTQG
Trigger: CCCTTGAGTACTGGGAGGCAAACCTGTCTGCGAATGGCCTAGGCAGGGCAGAGTAGGGTGGATTTTCCCTCCAGGTTGTAATTCACTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
3UTR CCA 90 bp CACACAGAAATCTCAGAACACTCCTCATACCTCACTCAGTTAACTTaGTGGAAAAGTCTGGCTGTGTGCACGGGCAGACGGCAAGGCAGC +
Preference number: 1 (lower is better)
Translates to: HTEISEHSSYLTQLT*WKSLAVCTGRRQGS
Trigger: GCTGCCTTGCCGTCTGCCCGTGCACACAGCCAGACTTTTCCACCAAGTTAACTGAGTGAGGTATGAGGAGTGTTCTGAGATTTCTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
3UTR CCA 90 bp ATGCTTTCTCTACTACAGGGAATTGCTAACCAAACTATTCAAACATaGCAGTGGGAAAGAATCTCTGCTTTTCAGCAGAGCCCCCAGGGG +
Preference number: 1 (lower is better)
Translates to: MLSLLQGIANQTIQT*QWERISAFQQSPQG
Trigger: CCCCTGGGGGCTCTGCTGAAAAGCAGAGATTCTTTCCCACTGCCATGTTTGAATAGTTTGGTTAGCAATTCCCTGTAGTAGAGAAAGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
3UTR-3UTR CCA 90 bp GTCTGGCTGTGTGCACGGGCAGACGGCAAGGCAGCCAGCAGCAGAACACTCCCCCACACCCGCTCCTCCTaGGGTGCTGTCTGGCTCCTG +
Preference number: 2 (lower is better)
Translates to: VWLCARADGKAASSRTLPHTRSS*GAVWLL
Trigger: CAGGAGCCAGACAGCACCCCAGGAGGAGCGGGTGTG...GGGGAGTGTTCTGCTGCTGGCTGCCTTGCCGTCTGCCCGTGCACACAGCCAGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
3UTR-3UTR GCA 90 bp AAGTCTGGCTGTGTGCACGGGCAGACGGCAAGGCAGCCAGCAGCAGAACACTCCCCTTCTCTGCACGAGTaGCCCGGAGCCCGACTGATC +
Preference number: 2 (lower is better)
Translates to: KSGCVHGQTARQPAAEHSPSLHE*PGARLI
Trigger: GATCAGTCGGGCTCCGGGGCACTCGTGCAGAGAAGG...GGAGTGTTCTGCTGCTGGCTGCCTTGCCGTCTGCCCGTGCACACAGCCAGACTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
3UTR-3UTR CCA 90 bp CCTGGAGGGAAAATCCACCCTACTCTGCCCTGCCTAGGCCATTCGCAGACAGGTCACACCCGCTCCTCCTaGGGTGCTGTCTGGCTCCTG +
Preference number: 2 (lower is better)
Translates to: PGGKIHPTLPCLGHSQTGHTRSS*GAVWLL
Trigger: CAGGAGCCAGACAGCACCCCAGGAGGAGCGGGTGTG...ACCTGTCTGCGAATGGCCTAGGCAGGGCAGAGTAGGGTGGATTTTCCCTCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
3UTR-3UTR CCA 90 bp AAGTCTGGCTGTGTGCACGGGCAGACGGCAAGGCAGCCAGCAGCAGAACACTCCCCAGTGCTGCGTGAGTaGGACAGACCCACCTTTGAC +
Preference number: 2 (lower is better)
Translates to: KSGCVHGQTARQPAAEHSPVLRE*DRPTFD
Trigger: GTCAAAGGTGGGTCTGTCCCACTCACGCAGCACTGG...GGAGTGTTCTGCTGCTGGCTGCCTTGCCGTCTGCCCGTGCACACAGCCAGACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
3UTR-3UTR TCA 90 bp ATGGCCTTCTCTGCACGAGTGCCCCGGAGCCCGACTGATCCAGTGCTGCGTGAGTGTAACTCCTTGTGTTaGCCAGGCAGACCATCCACA +
Preference number: 2 (lower is better)
Translates to: MAFSARVPRSPTDPVLRECNSLC*PGRPST
Trigger: TGTGGATGGTCTGCCTGGTCAACACAAGGAGTTACA...CTCACGCAGCACTGGATCAGTCGGGCTCCGGGGCACTCGTGCAGAGAAGGCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
3UTR-3UTR TCA 90 bp ATGGCCTTCTCTGCACGAGTGCCCCGGAGCCCGACTGATCCAGTGCTGCGTGAGGGACAGACCCACCTTTaGCTTCTGATCTCACGAACA +
Preference number: 2 (lower is better)
Translates to: MAFSARVPRSPTDPVLREGQTHL*LLISRT
Trigger: TGTTCGTGAGATCAGAAGTCAAAGGTGGGTCTGTCC...CTCACGCAGCACTGGATCAGTCGGGCTCCGGGGCACTCGTGCAGAGAAGGCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
3UTR-3UTR GCA 90 bp CCCTGCCTAGGCCATTCGCAGACAGGTTTGCCTCCCAGTACTCAAGGGAGAAGCAAAAGTCTGGCTGTGTaGACGGGCAGACGGCAAGGC +
Preference number: 2 (lower is better)
Translates to: PCLGHSQTGLPPSTQGRSKSLAV*TGRRQG
Trigger: GCCTTGCCGTCTGCCCGTGCACACAGCCAGACTTTT...GCTTCTCCCTTGAGTACTGGGAGGCAAACCTGTCTGCGAATGGCCTAGGCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
3UTR-3UTR GCA 90 bp CCTGGAGGGAAAATCCACCCTACTCTGCCCTGCCTAGGCCATTCGCAGACAGGTAAAAGTCTGGCTGTGTaGACGGGCAGACGGCAAGGC +
Preference number: 2 (lower is better)
Translates to: PGGKIHPTLPCLGHSQTGKSLAV*TGRRQG
Trigger: GCCTTGCCGTCTGCCCGTGCACACAGCCAGACTTTT...ACCTGTCTGCGAATGGCCTAGGCAGGGCAGAGTAGGGTGGATTTTCCCTCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
3UTR-3UTR CCA 90 bp TTTGCCTCCCAGTACTCAAGGGAGAAGCCCCTACACACAGAAATCTCAGAACACCACACCCGCTCCTCCTaGGGTGCTGTCTGGCTCCTG +
Preference number: 2 (lower is better)
Translates to: FASQYSREKPLHTEISEHHTRSS*GAVWLL
Trigger: CAGGAGCCAGACAGCACCCCAGGAGGAGCGGGTGTG...GTGTTCTGAGATTTCTGTGTGTAGGGGCTTCTCCCTTGAGTACTGGGAGGCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
3UTR-3UTR CCA 90 bp GGCCATTCGCAGACAGGTTTGCCTCCCAGTACTCAAGGGAGAAGCCCCTACACACTCCCCTCTCTAGAATaGCCTTCTCTGCACGAGTGC +
Preference number: 2 (lower is better)
Translates to: GHSQTGLPPSTQGRSPYTLPSLE*PSLHEC
Trigger: GCACTCGTGCAGAGAAGGCCATTCTAGAGAGGGGAG...TGTGTAGGGGCTTCTCCCTTGAGTACTGGGAGGCAAACCTGTCTGCGAATGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
3UTR-3UTR TCA 90 bp AAGTCTGGCTGTGTGCACGGGCAGACGGCAAGGCAGCCAGCAGCAGAACACTCCCCCACCTTTGACTTCTaGTCTCACGAACATTTCTCA +
Preference number: 2 (lower is better)
Translates to: KSGCVHGQTARQPAAEHSPTFDF*SHEHFS
Trigger: TGAGAAATGTTCGTGAGATCAGAAGTCAAAGGTGGG...GGAGTGTTCTGCTGCTGGCTGCCTTGCCGTCTGCCCGTGCACACAGCCAGACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
3UTR-3UTR GCA 90 bp CATAGACACAGTGAATTACAACCTGGAGGGAAAATCCACCCTACTCTGCCCTGCCCTTCTCTGCACGAGTaGCCCGGAGCCCGACTGATC +
Preference number: 2 (lower is better)
Translates to: HRHSELQPGGKIHPTLPCPSLHE*PGARLI
Trigger: GATCAGTCGGGCTCCGGGGCACTCGTGCAGAGAAGG...GCAGGGCAGAGTAGGGTGGATTTTCCCTCCAGGTTGTAATTCACTGTGTCTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
3UTR-3UTR GCA 90 bp ATAGACACAGTGAATTACAACCTGGAGGGAAAATCCACCCTACTCTGCCCTGCCCCTTCTCTGCACGAGTaGCCCGGAGCCCGACTGATC +
Preference number: 2 (lower is better)
Translates to: IDTVNYNLEGKSTLLCPAPSLHE*PGARLI
Trigger: GATCAGTCGGGCTCCGGGGCACTCGTGCAGAGAAGG...GGCAGGGCAGAGTAGGGTGGATTTTCCCTCCAGGTTGTAATTCACTGTGTCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
3UTR-3UTR GCA 90 bp TTTGCCTCCCAGTACTCAAGGGAGAAGCCCCTACACACAGAAATCTCAGAACACGCCCGACTGATCCAGTaGTGCGTGAGTGGGACAGAC +
Preference number: 2 (lower is better)
Translates to: FASQYSREKPLHTEISEHARLIQ*CVSGTD
Trigger: GTCTGTCCCACTCACGCAGCACTGGATCAGTCGGGC...GTGTTCTGAGATTTCTGTGTGTAGGGGCTTCTCCCTTGAGTACTGGGAGGCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
3UTR CAA 90 bp AAAATCCACCCTACTCTGCCCTGCCTAGGCCATTCGCAGACAGGTTaGCCTCCCAGTACTCAAGGGAGAAGCCCCTACACACAGAAATCT +
Preference number: 2 (lower is better)
Translates to: KIHPTLPCLGHSQTG*PPSTQGRSPYTQKS
Trigger: AGATTTCTGTGTGTAGGGGCTTCTCCCTTGAGTACTGGGAGGCAAACCTGTCTGCGAATGGCCTAGGCAGGGCAGAGTAGGGTGGATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
3UTR-3UTR CCA 90 bp TTTGCCTCCCAGTACTCAAGGGAGAAGCCCCTACACACAGAAATCTCAGAACACCCAGTGCTGCGTGAGTaGGACAGACCCACCTTTGAC +
Preference number: 2 (lower is better)
Translates to: FASQYSREKPLHTEISEHPVLRE*DRPTFD
Trigger: GTCAAAGGTGGGTCTGTCCCACTCACGCAGCACTGG...GTGTTCTGAGATTTCTGTGTGTAGGGGCTTCTCCCTTGAGTACTGGGAGGCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
3UTR-3UTR CCA 90 bp CATAGACACAGTGAATTACAACCTGGAGGGAAAATCCACCCTACTCTGCCCTGCCCAGTGCTGCGTGAGTaGGACAGACCCACCTTTGAC +
Preference number: 2 (lower is better)
Translates to: HRHSELQPGGKIHPTLPCPVLRE*DRPTFD
Trigger: GTCAAAGGTGGGTCTGTCCCACTCACGCAGCACTGG...GCAGGGCAGAGTAGGGTGGATTTTCCCTCCAGGTTGTAATTCACTGTGTCTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
3UTR-3UTR TCA 90 bp GGCCATTCGCAGACAGGTTTGCCTCCCAGTACTCAAGGGAGAAGCCCCTACACACCCACCTTTGACTTCTaGTCTCACGAACATTTCTCA +
Preference number: 2 (lower is better)
Translates to: GHSQTGLPPSTQGRSPYTPTFDF*SHEHFS
Trigger: TGAGAAATGTTCGTGAGATCAGAAGTCAAAGGTGGG...TGTGTAGGGGCTTCTCCCTTGAGTACTGGGAGGCAAACCTGTCTGCGAATGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
3UTR-3UTR GCA 90 bp AAGTCTGGCTGTGTGCACGGGCAGACGGCAAGGCAGCCAGCAGCAGAACACTCCCGAACATTTCTCAAATaGTTTCTCTACTACAGGGAA +
Preference number: 2 (lower is better)
Translates to: KSGCVHGQTARQPAAEHSRTFLK*FLYYRE
Trigger: TTCCCTGTAGTAGAGAAAGCATTTGAGAAATGTTCG...GGAGTGTTCTGCTGCTGGCTGCCTTGCCGTCTGCCCGTGCACACAGCCAGACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
3UTR-3UTR CCA 90 bp CATAGACACAGTGAATTACAACCTGGAGGGAAAATCCACCCTACTCTGCCCTGCCTTGGTGGAAAAGTCTaGCTGTGTGCACGGGCAGAC +
Preference number: 2 (lower is better)
Translates to: HRHSELQPGGKIHPTLPCLGGKV*LCARAD
Trigger: GTCTGCCCGTGCACACAGCCAGACTTTTCCACCAAG...GCAGGGCAGAGTAGGGTGGATTTTCCCTCCAGGTTGTAATTCACTGTGTCTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
3UTR CAA 90 bp ACACACAGAAATCTCAGAACACTCCTCATACCTCACTCAGTTAACTaGGTGGAAAAGTCTGGCTGTGTGCACGGGCAGACGGCAAGGCAG +
Preference number: 2 (lower is better)
Translates to: THRNLRTLLIPHSVN*VEKSGCVHGQTARQ
Trigger: CTGCCTTGCCGTCTGCCCGTGCACACAGCCAGACTTTTCCACCAAGTTAACTGAGTGAGGTATGAGGAGTGTTCTGAGATTTCTGTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
3UTR CAA 90 bp GGAGCCCGACTGATCCAGTGCTGCGTGAGTGGGACAGACCCACCTTaGACTTCTGATCTCACGAACATTTCTCAAATGCTTTCTCTACTA +
Preference number: 2 (lower is better)
Translates to: GARLIQCCVSGTDPP*TSDLTNISQMLSLL
Trigger: TAGTAGAGAAAGCATTTGAGAAATGTTCGTGAGATCAGAAGTCAAAGGTGGGTCTGTCCCACTCACGCAGCACTGGATCAGTCGGGCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
3UTR-3UTR TCA 90 bp ATAGACACAGTGAATTACAACCTGGAGGGAAAATCCACCCTACTCTGCCCTGCCTGTAACTCCTTGTGTTaGCCAGGCAGACCATCCACA +
Preference number: 2 (lower is better)
Translates to: IDTVNYNLEGKSTLLCPACNSLC*PGRPST
Trigger: TGTGGATGGTCTGCCTGGTCAACACAAGGAGTTACA...GGCAGGGCAGAGTAGGGTGGATTTTCCCTCCAGGTTGTAATTCACTGTGTCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
3UTR-3UTR TCA 90 bp ATAGACACAGTGAATTACAACCTGGAGGGAAAATCCACCCTACTCTGCCCTGCCGGACAGACCCACCTTTaGCTTCTGATCTCACGAACA +
Preference number: 2 (lower is better)
Translates to: IDTVNYNLEGKSTLLCPAGQTHL*LLISRT
Trigger: TGTTCGTGAGATCAGAAGTCAAAGGTGGGTCTGTCC...GGCAGGGCAGAGTAGGGTGGATTTTCCCTCCAGGTTGTAATTCACTGTGTCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
3UTR-3UTR GCA 90 bp CCTGGAGGGAAAATCCACCCTACTCTGCCCTGCCTAGGCCATTCGCAGACAGGTCGAACATTTCTCAAATaGTTTCTCTACTACAGGGAA +
Preference number: 2 (lower is better)
Translates to: PGGKIHPTLPCLGHSQTGRTFLK*FLYYRE
Trigger: TTCCCTGTAGTAGAGAAAGCATTTGAGAAATGTTCG...ACCTGTCTGCGAATGGCCTAGGCAGGGCAGAGTAGGGTGGATTTTCCCTCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
3UTR-3UTR CCA 90 bp ATTACAACCTGGAGGGAAAATCCACCCTACTCTGCCCTGCCTAGGCCATTCGCAACTCAGTTAACTTGGTaGAAAAGTCTGGCTGTGTGC +
Preference number: 2 (lower is better)
Translates to: ITTWRENPPYSALPRPFATQLTW*KSLAVC
Trigger: GCACACAGCCAGACTTTTCCACCAAGTTAACTGAGT...TGCGAATGGCCTAGGCAGGGCAGAGTAGGGTGGATTTTCCCTCCAGGTTGTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
3UTR-3UTR GCA 90 bp CATTTGTGTCATAGACACAGTGAATTACAACCTGGAGGGAAAATCCACCCTACTAAAAGTCTGGCTGTGTaGACGGGCAGACGGCAAGGC +
Preference number: 2 (lower is better)
Translates to: HLCHRHSELQPGGKIHPTKSLAV*TGRRQG
Trigger: GCCTTGCCGTCTGCCCGTGCACACAGCCAGACTTTT...AGTAGGGTGGATTTTCCCTCCAGGTTGTAATTCACTGTGTCTATGACACAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
3UTR-3UTR GCA 90 bp GACTACAACATTTGTGTCATAGACACAGTGAATTACAACCTGGAGGGAAAATCCCGACTGATCCAGTGCTaGGTGAGTGGGACAGACCCA +
Preference number: 2 (lower is better)
Translates to: DYNICVIDTVNYNLEGKSRLIQC*VSGTDP
Trigger: TGGGTCTGTCCCACTCACGCAGCACTGGATCAGTCG...GGATTTTCCCTCCAGGTTGTAATTCACTGTGTCTATGACACAAATGTTGTAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
3UTR-3UTR CCA 90 bp ATCCAGTGCTGCGTGAGTGGGACAGACCCACCTTTGACTTCTGATCTCACGAACATTCAAACATGGCAGTaGGAAAGAATCTCTGCTTTT +
Preference number: 2 (lower is better)
Translates to: IQCCVSGTDPPLTSDLTNIQTWQ*ERISAF
Trigger: AAAAGCAGAGATTCTTTCCCACTGCCATGTTTGAAT...GTTCGTGAGATCAGAAGTCAAAGGTGGGTCTGTCCCACTCACGCAGCACTGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
3UTR-3UTR TCA 90 bp CATTTGTGTCATAGACACAGTGAATTACAACCTGGAGGGAAAATCCACCCTACTGGACAGACCCACCTTTaGCTTCTGATCTCACGAACA +
Preference number: 2 (lower is better)
Translates to: HLCHRHSELQPGGKIHPTGQTHL*LLISRT
Trigger: TGTTCGTGAGATCAGAAGTCAAAGGTGGGTCTGTCC...AGTAGGGTGGATTTTCCCTCCAGGTTGTAATTCACTGTGTCTATGACACAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
3UTR-3UTR GCA 90 bp AGTGAATTACAACCTGGAGGGAAAATCCACCCTACTCTGCCCTGCCTAGGCCATCGAACATTTCTCAAATaGTTTCTCTACTACAGGGAA +
Preference number: 2 (lower is better)
Translates to: SELQPGGKIHPTLPCLGHRTFLK*FLYYRE
Trigger: TTCCCTGTAGTAGAGAAAGCATTTGAGAAATGTTCG...ATGGCCTAGGCAGGGCAGAGTAGGGTGGATTTTCCCTCCAGGTTGTAATTCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
3UTR-3UTR GCA 90 bp GACTACAACATTTGTGTCATAGACACAGTGAATTACAACCTGGAGGGAAAATCCATTCGCAGACAGGTTTaGCTCCCAGTACTCAAGGGA +
Preference number: 2 (lower is better)
Translates to: DYNICVIDTVNYNLEGKSIRRQV*LPVLKG
Trigger: TCCCTTGAGTACTGGGAGGCAAACCTGTCTGCGAAT...GGATTTTCCCTCCAGGTTGTAATTCACTGTGTCTATGACACAAATGTTGTAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
3UTR-3UTR CCA 90 bp CATAGACACAGTGAATTACAACCTGGAGGGAAAATCCACCCTACTCTGCCCTGCATTCAAACATGGCAGTaGGAAAGAATCTCTGCTTTT +
Preference number: 2 (lower is better)
Translates to: HRHSELQPGGKIHPTLPCIQTWQ*ERISAF
Trigger: AAAAGCAGAGATTCTTTCCCACTGCCATGTTTGAAT...GCAGGGCAGAGTAGGGTGGATTTTCCCTCCAGGTTGTAATTCACTGTGTCTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
3UTR-3UTR CCA 90 bp TTAATTGACTACAACATTTGTGTCATAGACACAGTGAATTACAACCTGGAGGGACTTGGTGGAAAAGTCTaGCTGTGTGCACGGGCAGAC +
Preference number: 2 (lower is better)
Translates to: LIDYNICVIDTVNYNLEGLGGKV*LCARAD
Trigger: GTCTGCCCGTGCACACAGCCAGACTTTTCCACCAAG...TCCCTCCAGGTTGTAATTCACTGTGTCTATGACACAAATGTTGTAGTCAATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
3UTR-3UTR TCA 90 bp CTCAAATGCTTTCTCTACTACAGGGAATTGCTAACCAAACTATTCAAACATGGCTGTAACTCCTTGTGTTaGCCAGGCAGACCATCCACA +
Preference number: 2 (lower is better)
Translates to: LKCFLYYRELLTKLFKHGCNSLC*PGRPST
Trigger: TGTGGATGGTCTGCCTGGTCAACACAAGGAGTTACA...GCCATGTTTGAATAGTTTGGTTAGCAATTCCCTGTAGTAGAGAAAGCATTTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
3UTR-3UTR CCA 90 bp TACAACATTTGTGTCATAGACACAGTGAATTACAACCTGGAGGGAAAATCCACCCTCACTCAGTTAACTTaGTGGAAAAGTCTGGCTGTG +
Preference number: 2 (lower is better)
Translates to: YNICVIDTVNYNLEGKSTLTQLT*WKSLAV
Trigger: CACAGCCAGACTTTTCCACCAAGTTAACTGAGTGAG...GGTGGATTTTCCCTCCAGGTTGTAATTCACTGTGTCTATGACACAAATGTTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
3UTR GCA 72 bp CTGCACGAGTGCCCCGGAGCCCGACTGATCCAGTGCTaGGTGAGTGGGACAGACCCACCTTTGACTTCTGAT +
Preference number: 3 (lower is better)
Translates to: LHECPGARLIQC*VSGTDPPLTSD
Trigger: ATCAGAAGTCAAAGGTGGGTCTGTCCCACTCACGCAGCACTGGATCAGTCGGGCTCCGGGGCACTCGTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
3UTR GCA 72 bp TCTCTGCACGAGTGCCCCGGAGCCCGACTGATCCAGTaGTGCGTGAGTGGGACAGACCCACCTTTGACTTCT +
Preference number: 3 (lower is better)
Translates to: SLHECPGARLIQ*CVSGTDPPLTS
Trigger: AGAAGTCAAAGGTGGGTCTGTCCCACTCACGCAGCACTGGATCAGTCGGGCTCCGGGGCACTCGTGCAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
3UTR GCA 72 bp CTCACTCAGTTAACTTGGTGGAAAAGTCTGGCTGTGTaGACGGGCAGACGGCAAGGCAGCCAGCAGCAGAAC +
Preference number: 3 (lower is better)
Translates to: LTQLTWWKSLAV*TGRRQGSQQQN
Trigger: GTTCTGCTGCTGGCTGCCTTGCCGTCTGCCCGTGCACACAGCCAGACTTTTCCACCAAGTTAACTGAGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
3UTR GCA 72 bp TTACAACCTGGAGGGAAAATCCACCCTACTCTGCCCTaGCTAGGCCATTCGCAGACAGGTTTGCCTCCCAGT +
Preference number: 3 (lower is better)
Translates to: LQPGGKIHPTLP*LGHSQTGLPPS
Trigger: ACTGGGAGGCAAACCTGTCTGCGAATGGCCTAGGCAGGGCAGAGTAGGGTGGATTTTCCCTCCAGGTTGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
3UTR-3UTR CAA 90 bp ATGGCCTTCTCTGCACGAGTGCCCCGGAGCCCGACTGATCCAGTGCTGCGTGAGCTCTACTACAGGGAATaGCTAACCAAACTATTCAAA +
Preference number: 3 (lower is better)
Translates to: MAFSARVPRSPTDPVLRELYYRE*LTKLFK
Trigger: TTTGAATAGTTTGGTTAGCAATTCCCTGTAGTAGAG...CTCACGCAGCACTGGATCAGTCGGGCTCCGGGGCACTCGTGCAGAGAAGGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
3UTR-3UTR CAA 90 bp CATAGACACAGTGAATTACAACCTGGAGGGAAAATCCACCCTACTCTGCCCTGCCATTCGCAGACAGGTTaGCCTCCCAGTACTCAAGGG +
Preference number: 3 (lower is better)
Translates to: HRHSELQPGGKIHPTLPCHSQTG*PPSTQG
Trigger: CCCTTGAGTACTGGGAGGCAAACCTGTCTGCGAATG...GCAGGGCAGAGTAGGGTGGATTTTCCCTCCAGGTTGTAATTCACTGTGTCTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
3UTR-3UTR CAA 90 bp ATTACAACCTGGAGGGAAAATCCACCCTACTCTGCCCTGCCTAGGCCATTCGCACCTCACTCAGTTAACTaGGTGGAAAAGTCTGGCTGT +
Preference number: 3 (lower is better)
Translates to: ITTWRENPPYSALPRPFAPHSVN*VEKSGC
Trigger: ACAGCCAGACTTTTCCACCAAGTTAACTGAGTGAGG...TGCGAATGGCCTAGGCAGGGCAGAGTAGGGTGGATTTTCCCTCCAGGTTGTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
3UTR-3UTR CAA 90 bp TTTGCCTCCCAGTACTCAAGGGAGAAGCCCCTACACACAGAAATCTCAGAACACCCTCACTCAGTTAACTaGGTGGAAAAGTCTGGCTGT +
Preference number: 3 (lower is better)
Translates to: FASQYSREKPLHTEISEHPHSVN*VEKSGC
Trigger: ACAGCCAGACTTTTCCACCAAGTTAACTGAGTGAGG...GTGTTCTGAGATTTCTGTGTGTAGGGGCTTCTCCCTTGAGTACTGGGAGGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
3UTR-3UTR CAA 90 bp TTTGCCTCCCAGTACTCAAGGGAGAAGCCCCTACACACAGAAATCTCAGAACACCTCTACTACAGGGAATaGCTAACCAAACTATTCAAA +
Preference number: 3 (lower is better)
Translates to: FASQYSREKPLHTEISEHLYYRE*LTKLFK
Trigger: TTTGAATAGTTTGGTTAGCAATTCCCTGTAGTAGAG...GTGTTCTGAGATTTCTGTGTGTAGGGGCTTCTCCCTTGAGTACTGGGAGGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
3UTR-3UTR CAA 90 bp GACTACAACATTTGTGTCATAGACACAGTGAATTACAACCTGGAGGGAAAATCCCTCTACTACAGGGAATaGCTAACCAAACTATTCAAA +
Preference number: 3 (lower is better)
Translates to: DYNICVIDTVNYNLEGKSLYYRE*LTKLFK
Trigger: TTTGAATAGTTTGGTTAGCAATTCCCTGTAGTAGAG...GGATTTTCCCTCCAGGTTGTAATTCACTGTGTCTATGACACAAATGTTGTAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR GCA 90 bp GTCTGGCTGTGTGCACGGGCAGACGGCAAGGCAGCCAGCAGCAGAACACTCCCCCGGCAAGCCGCCTGCTaGTGCTCCTGCTGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: VWLCARADGKAASSRTLPRQAAC*CSCWSR
Trigger: CCTGGACCAGCAGGAGCAGCAGCAGGCGGCTTGCCG...GGGGAGTGTTCTGCTGCTGGCTGCCTTGCCGTCTGCCCGTGCACACAGCCAGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000419717.3
ENST00000545940.6
CDS-3UTR GCA 90 bp GTCTGGCTGTGTGCACGGGCAGACGGCAAGGCAGCCAGCAGCAGAACACTCCCCAGGCGGCAAGCCGCCTaGTGCTGCTCCTGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: VWLCARADGKAASSRTLPRRQAA*CCSCWS
Trigger: GGACCAGCAGGAGCAGCAGCAGGCGGCTTGCCGCCT...GGGGAGTGTTCTGCTGCTGGCTGCCTTGCCGTCTGCCCGTGCACACAGCCAGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419717.3
ENST00000545940.6
CDS-3UTR GCA 90 bp CTGCACGAGTGCCCCGGAGCCCGACTGATCCAGTGCTGCGTGAGTGGGACAGACAGGCGGCAAGCCGCCTaGTGCTGCTCCTGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: LHECPGARLIQCCVSGTDRRQAA*CCSCWS
Trigger: GGACCAGCAGGAGCAGCAGCAGGCGGCTTGCCGCCT...GTCTGTCCCACTCACGCAGCACTGGATCAGTCGGGCTCCGGGGCACTCGTGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419717.3
ENST00000545940.6
CDS-3UTR TCA 90 bp AAGTCTGGCTGTGTGCACGGGCAGACGGCAAGGCAGCCAGCAGCAGAACACTCCACTTCTGCACCGGGGTaGGCGCAGCCACGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: KSGCVHGQTARQPAAEHSTSAPG*AQPRPA
Trigger: GGCTGGGCGTGGCTGCGCTCACCCCGGTGCAGAAGT...GGAGTGTTCTGCTGCTGGCTGCCTTGCCGTCTGCCCGTGCACACAGCCAGACTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419717.3
ENST00000545940.6
CDS-3UTR CCA 90 bp GTCTGGCTGTGTGCACGGGCAGACGGCAAGGCAGCCAGCAGCAGAACACTCCCCTGGCCAGGCCCCTCCTaGTACATCTCGCCACCTGGC +
Preference number: 4 (lower is better)
Translates to: VWLCARADGKAASSRTLPWPGPS*YISPPG
Trigger: GCCAGGTGGCGAGATGTACCAGGAGGGGCCTGGCCA...GGGGAGTGTTCTGCTGCTGGCTGCCTTGCCGTCTGCCCGTGCACACAGCCAGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545940.6
ENST00000673940.1
CDS-3UTR CCA 90 bp GTCTGGCTGTGTGCACGGGCAGACGGCAAGGCAGCCAGCAGCAGAACACTCCCCAGAAGAGGGGGAGGGTaGCAGGATCATGGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: VWLCARADGKAASSRTLPRRGGG*QDHGQA
Trigger: GGCCTGGCCATGATCCTGCCACCCTCCCCCTCTTCT...GGGGAGTGTTCTGCTGCTGGCTGCCTTGCCGTCTGCCCGTGCACACAGCCAGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000545940.6
ENST00000673940.1
CDS-3UTR GCA 90 bp ATGGCCTTCTCTGCACGAGTGCCCCGGAGCCCGACTGATCCAGTGCTGCGTGAGCCTTCTCTGCACGAGTaGCCCGGAGCCCGACTGATC +
Preference number: 4 (lower is better)
Translates to: MAFSARVPRSPTDPVLREPSLHE*PGARLI
Trigger: GATCAGTCGGGCTCCGGGGCACTCGTGCAGAGAAGG...CTCACGCAGCACTGGATCAGTCGGGCTCCGGGGCACTCGTGCAGAGAAGGCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR CCA 90 bp ATGGCCTTCTCTGCACGAGTGCCCCGGAGCCCGACTGATCCAGTGCTGCGTGAGCTCTGCATCCTGTGCTaGGTCGTGGCCACTCCTCCG +
Preference number: 4 (lower is better)
Translates to: MAFSARVPRSPTDPVLRELCILC*VVATPP
Trigger: CGGAGGAGTGGCCACGACCCAGCACAGGATGCAGAG...CTCACGCAGCACTGGATCAGTCGGGCTCCGGGGCACTCGTGCAGAGAAGGCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419717.3
ENST00000545940.6
CDS-3UTR CCA 90 bp CTGCACGAGTGCCCCGGAGCCCGACTGATCCAGTGCTGCGTGAGTGGGACAGACGCTGGCTTCATGTGCTaGGGAAGGGCTCTTTGGCGG +
Preference number: 4 (lower is better)
Translates to: LHECPGARLIQCCVSGTDAGFMC*GRALWR
Trigger: CCGCCAAAGAGCCCTTCCCCAGCACATGAAGCCAGC...GTCTGTCCCACTCACGCAGCACTGGATCAGTCGGGCTCCGGGGCACTCGTGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR CCA 90 bp ATGGCCTTCTCTGCACGAGTGCCCCGGAGCCCGACTGATCCAGTGCTGCGTGAGTGCACGCTCTGGGGATaGCCGCTGACATCCAGTGGC +
Preference number: 4 (lower is better)
Translates to: MAFSARVPRSPTDPVLRECTLWG*PLTSSG
Trigger: GCCACTGGATGTCAGCGGCCATCCCCAGAGCGTGCA...CTCACGCAGCACTGGATCAGTCGGGCTCCGGGGCACTCGTGCAGAGAAGGCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419717.3
CDS-3UTR CCA 90 bp AAGTCTGGCTGTGTGCACGGGCAGACGGCAAGGCAGCCAGCAGCAGAACACTCCTGGCCAGGCCCCTCCTaGTACATCTCGCCACCTGGC +
Preference number: 4 (lower is better)
Translates to: KSGCVHGQTARQPAAEHSWPGPS*YISPPG
Trigger: GCCAGGTGGCGAGATGTACCAGGAGGGGCCTGGCCA...GGAGTGTTCTGCTGCTGGCTGCCTTGCCGTCTGCCCGTGCACACAGCCAGACTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545940.6
ENST00000673940.1
CDS-3UTR GCA 90 bp GTCTGGCTGTGTGCACGGGCAGACGGCAAGGCAGCCAGCAGCAGAACACTCCCCTGGGCTGGCTTCATGTaGTGGGGAAGGGCTCTTTGG +
Preference number: 4 (lower is better)
Translates to: VWLCARADGKAASSRTLPWAGFM*WGRALW
Trigger: CCAAAGAGCCCTTCCCCAGCACATGAAGCCAGCCCA...GGGGAGTGTTCTGCTGCTGGCTGCCTTGCCGTCTGCCCGTGCACACAGCCAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR GCA 90 bp GTCTGGCTGTGTGCACGGGCAGACGGCAAGGCAGCCAGCAGCAGAACACTCCCCTCTTCAGCTGTGGCCTaGTGGGCTGGCTTCATGTGC +
Preference number: 4 (lower is better)
Translates to: VWLCARADGKAASSRTLPSSAVA*WAGFMC
Trigger: GCACATGAAGCCAGCCCAGCAGGCCACAGCTGAAGA...GGGGAGTGTTCTGCTGCTGGCTGCCTTGCCGTCTGCCCGTGCACACAGCCAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR CCA 90 bp CCTGGAGGGAAAATCCACCCTACTCTGCCCTGCCTAGGCCATTCGCAGACAGGTTCCTGTGCTGGGTCGTaGCCACTCCTCCGGGACCCG +
Preference number: 4 (lower is better)
Translates to: PGGKIHPTLPCLGHSQTGSCAGS*PLLRDP
Trigger: CGGGTCCCGGAGGAGTGGCCACGACCCAGCACAGGA...ACCTGTCTGCGAATGGCCTAGGCAGGGCAGAGTAGGGTGGATTTTCCCTCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419717.3
ENST00000545940.6
CDS-3UTR CCA 90 bp ATGGCCTTCTCTGCACGAGTGCCCCGGAGCCCGACTGATCCAGTGCTGCGTGAGTGTGGCCTGCTGGGCTaGCTTCATGTGCTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: MAFSARVPRSPTDPVLRECGLLG*LHVLGK
Trigger: CTTCCCCAGCACATGAAGCCAGCCCAGCAGGCCACA...CTCACGCAGCACTGGATCAGTCGGGCTCCGGGGCACTCGTGCAGAGAAGGCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR TCA 90 bp CTGCACGAGTGCCCCGGAGCCCGACTGATCCAGTGCTGCGTGAGTGGGACAGACTGTCCAGAATGGCTGTaGCCAAAGGCTGCAGTTGGG +
Preference number: 4 (lower is better)
Translates to: LHECPGARLIQCCVSGTDCPEWL*PKAAVG
Trigger: CCCAACTGCAGCCTTTGGTCACAGCCATTCTGGACA...GTCTGTCCCACTCACGCAGCACTGGATCAGTCGGGCTCCGGGGCACTCGTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419717.3
ENST00000545940.6
CDS-3UTR TCA 90 bp GTCTGGCTGTGTGCACGGGCAGACGGCAAGGCAGCCAGCAGCAGAACACTCCCCGACATCCAGTGGCTTTaGGACTGTCTCATCTGCGGG +
Preference number: 4 (lower is better)
Translates to: VWLCARADGKAASSRTLPDIQWL*DCLICG
Trigger: CCCGCAGATGAGACAGTCTCAAAGCCACTGGATGTC...GGGGAGTGTTCTGCTGCTGGCTGCCTTGCCGTCTGCCCGTGCACACAGCCAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR GCA 90 bp CTGCACGAGTGCCCCGGAGCCCGACTGATCCAGTGCTGCGTGAGTGGGACAGACAGAGTCAGGAAGCTCTaGATCCTGTGCTGGGTCGTG +
Preference number: 4 (lower is better)
Translates to: LHECPGARLIQCCVSGTDRVRKL*ILCWVV
Trigger: CACGACCCAGCACAGGATGCAGAGCTTCCTGACTCT...GTCTGTCCCACTCACGCAGCACTGGATCAGTCGGGCTCCGGGGCACTCGTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419717.3
ENST00000545940.6
CDS-3UTR GCA 90 bp ATGGCCTTCTCTGCACGAGTGCCCCGGAGCCCGACTGATCCAGTGCTGCGTGAGTCTTCAGCTGTGGCCTaGTGGGCTGGCTTCATGTGC +
Preference number: 4 (lower is better)
Translates to: MAFSARVPRSPTDPVLRESSAVA*WAGFMC
Trigger: GCACATGAAGCCAGCCCAGCAGGCCACAGCTGAAGA...CTCACGCAGCACTGGATCAGTCGGGCTCCGGGGCACTCGTGCAGAGAAGGCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR GCA 90 bp CCCTGCCTAGGCCATTCGCAGACAGGTTTGCCTCCCAGTACTCAAGGGAGAAGCGGGTTGCCTGAGGGCTaGAGGAGGTCAGGACCCCTC +
Preference number: 4 (lower is better)
Translates to: PCLGHSQTGLPPSTQGRSGLPEG*RRSGPL
Trigger: GAGGGGTCCTGACCTCCTGCAGCCCTCAGGCAACCC...GCTTCTCCCTTGAGTACTGGGAGGCAAACCTGTCTGCGAATGGCCTAGGCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR GCA 90 bp ATGGCCTTCTCTGCACGAGTGCCCCGGAGCCCGACTGATCCAGTGCTGCGTGAGTGGCTATCAGAACACTaGACCTGGCTGGAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: MAFSARVPRSPTDPVLREWLSEH*TWLEGR
Trigger: CCTGCCCTCCAGCCAGGTGCAGTGTTCTGATAGCCA...CTCACGCAGCACTGGATCAGTCGGGCTCCGGGGCACTCGTGCAGAGAAGGCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR CCA 90 bp CCCTGCCTAGGCCATTCGCAGACAGGTTTGCCTCCCAGTACTCAAGGGAGAAGCTGCTGCTGCTCCTGCTaGTCCAGGACACGGGCGCAC +
Preference number: 4 (lower is better)
Translates to: PCLGHSQTGLPPSTQGRSCCCSC*SRTRAH
Trigger: GTGCGCCCGTGTCCTGGACCAGCAGGAGCAGCAGCA...GCTTCTCCCTTGAGTACTGGGAGGCAAACCTGTCTGCGAATGGCCTAGGCAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419717.3
ENST00000545940.6
CDS-3UTR CCA 90 bp TTCGCAGACAGGTTTGCCTCCCAGTACTCAAGGGAGAAGCCCCTACACACAGAACTGCCTCCCGGCACCTaGCACCCCTCCAGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: FADRFASQYSREKPLHTELPPGT*HPSRRR
Trigger: CCGCCTCCTGGAGGGGTGCCAGGTGCCGGGAGGCAG...TTCTGTGTGTAGGGGCTTCTCCCTTGAGTACTGGGAGGCAAACCTGTCTGCGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419717.3
ENST00000545940.6
CDS-3UTR CCA 90 bp AAGTCTGGCTGTGTGCACGGGCAGACGGCAAGGCAGCCAGCAGCAGAACACTCCCCCATGGTCCTTGGGTaGTCTGTGGGGACTGTGGAG +
Preference number: 4 (lower is better)
Translates to: KSGCVHGQTARQPAAEHSPMVLG*SVGTVE
Trigger: CTCCACAGTCCCCACAGACCACCCAAGGACCATGGG...GGAGTGTTCTGCTGCTGGCTGCCTTGCCGTCTGCCCGTGCACACAGCCAGACTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR CCA 90 bp CCTGGAGGGAAAATCCACCCTACTCTGCCCTGCCTAGGCCATTCGCAGACAGGTCCTGGCTCAGCTCCATaGCAGACACAGGGCCGGGGA +
Preference number: 4 (lower is better)
Translates to: PGGKIHPTLPCLGHSQTGPGSAP*QTQGRG
Trigger: TCCCCGGCCCTGTGTCTGCCATGGAGCTGAGCCAGG...ACCTGTCTGCGAATGGCCTAGGCAGGGCAGAGTAGGGTGGATTTTCCCTCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR CCA 90 bp AACACTCCCCTCTCTAGAATGGCCTTCTCTGCACGAGTGCCCCGGAGCCCGACTTCAGAACACTGCACCTaGCTGGAGGGCAGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: NTPLSRMAFSARVPRSPTSEHCT*LEGRAW
Trigger: CCAGGCCCTGCCCTCCAGCCAGGTGCAGTGTTCTGA...AGTCGGGCTCCGGGGCACTCGTGCAGAGAAGGCCATTCTAGAGAGGGGAGTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR CCA 90 bp CTGCACGAGTGCCCCGGAGCCCGACTGATCCAGTGCTGCGTGAGTGGGACAGACCTTGGTGGAAAAGTCTaGCTGTGTGCACGGGCAGAC +
Preference number: 4 (lower is better)
Translates to: LHECPGARLIQCCVSGTDLGGKV*LCARAD
Trigger: GTCTGCCCGTGCACACAGCCAGACTTTTCCACCAAG...GTCTGTCCCACTCACGCAGCACTGGATCAGTCGGGCTCCGGGGCACTCGTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR GCA 90 bp CCCTGCCTAGGCCATTCGCAGACAGGTTTGCCTCCCAGTACTCAAGGGAGAAGCCAAGCCGCCTGCTGCTaGTCCTGCTGGTCCAGGACA +
Preference number: 4 (lower is better)
Translates to: PCLGHSQTGLPPSTQGRSQAACC*SCWSRT
Trigger: TGTCCTGGACCAGCAGGAGCAGCAGCAGGCGGCTTG...GCTTCTCCCTTGAGTACTGGGAGGCAAACCTGTCTGCGAATGGCCTAGGCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419717.3
ENST00000545940.6
CDS-3UTR GCA 90 bp GTCTGGCTGTGTGCACGGGCAGACGGCAAGGCAGCCAGCAGCAGAACACTCCCCCAAGCTCGTCTCCAATaGCAAGTTCTCCCTCTCAGC +
Preference number: 4 (lower is better)
Translates to: VWLCARADGKAASSRTLPQARLQ*QVLPLS
Trigger: GCTGAGAGGGAGAACTTGGCATTGGAGACGAGCTTG...GGGGAGTGTTCTGCTGCTGGCTGCCTTGCCGTCTGCCCGTGCACACAGCCAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000419717.3
ENST00000545940.6
CDS-3UTR GCA 90 bp GTCTGGCTGTGTGCACGGGCAGACGGCAAGGCAGCCAGCAGCAGAACACTCCCCATGAATTCAGGAGCTTaGAGTGGGGGCTGTGTCACC +
Preference number: 4 (lower is better)
Translates to: VWLCARADGKAASSRTLPMNSGA*SGGCVT
Trigger: GGTGACACAGCCCCCACTGCAAGCTCCTGAATTCAT...GGGGAGTGTTCTGCTGCTGGCTGCCTTGCCGTCTGCCCGTGCACACAGCCAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR CCA 90 bp AACACTCCCCTCTCTAGAATGGCCTTCTCTGCACGAGTGCCCCGGAGCCCGACTCCCATGGTCCTTGGGTaGTCTGTGGGGACTGTGGAG +
Preference number: 4 (lower is better)
Translates to: NTPLSRMAFSARVPRSPTPMVLG*SVGTVE
Trigger: CTCCACAGTCCCCACAGACCACCCAAGGACCATGGG...AGTCGGGCTCCGGGGCACTCGTGCAGAGAAGGCCATTCTAGAGAGGGGAGTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR CCA 90 bp GGCCATTCGCAGACAGGTTTGCCTCCCAGTACTCAAGGGAGAAGCCCCTACACAGGCTGGGGCCAGCTCTaGAGGGCTCTGGGTGAGGAT +
Preference number: 4 (lower is better)
Translates to: GHSQTGLPPSTQGRSPYTGWGQL*RALGED
Trigger: ATCCTCACCCAGAGCCCTCCAGAGCTGGCCCCAGCC...TGTGTAGGGGCTTCTCCCTTGAGTACTGGGAGGCAAACCTGTCTGCGAATGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR CCA 90 bp GGCCATTCGCAGACAGGTTTGCCTCCCAGTACTCAAGGGAGAAGCCCCTACACACACACCCGCTCCTCCTaGGGTGCTGTCTGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: GHSQTGLPPSTQGRSPYTHTRSS*GAVWLL
Trigger: CAGGAGCCAGACAGCACCCCAGGAGGAGCGGGTGTG...TGTGTAGGGGCTTCTCCCTTGAGTACTGGGAGGCAAACCTGTCTGCGAATGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR CCA 90 bp ATGGCCTTCTCTGCACGAGTGCCCCGGAGCCCGACTGATCCAGTGCTGCGTGAGCTCCCCTCTCTAGAATaGCCTTCTCTGCACGAGTGC +
Preference number: 4 (lower is better)
Translates to: MAFSARVPRSPTDPVLRELPSLE*PSLHEC
Trigger: GCACTCGTGCAGAGAAGGCCATTCTAGAGAGGGGAG...CTCACGCAGCACTGGATCAGTCGGGCTCCGGGGCACTCGTGCAGAGAAGGCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR TCA 90 bp CCCTGCCTAGGCCATTCGCAGACAGGTTTGCCTCCCAGTACTCAAGGGAGAAGCCGCCCAGCCTCCTCATaGCCAGACGGTAGTGGATGT +
Preference number: 4 (lower is better)
Translates to: PCLGHSQTGLPPSTQGRSRPASS*PDGSGC
Trigger: ACATCCACTACCGTCTGGTCATGAGGAGGCTGGGCG...GCTTCTCCCTTGAGTACTGGGAGGCAAACCTGTCTGCGAATGGCCTAGGCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419717.3
ENST00000545940.6
CDS-3UTR TCA 90 bp AACACTCCCCTCTCTAGAATGGCCTTCTCTGCACGAGTGCCCCGGAGCCCGACTGCCCAGGCTGCTCCCTaGAAACTCAAGGAGCATCCT +
Preference number: 4 (lower is better)
Translates to: NTPLSRMAFSARVPRSPTAQAAP*KLKEHP
Trigger: AGGATGCTCCTTGAGTTTTCAGGGAGCAGCCTGGGC...AGTCGGGCTCCGGGGCACTCGTGCAGAGAAGGCCATTCTAGAGAGGGGAGTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR TCA 90 bp CTGCACGAGTGCCCCGGAGCCCGACTGATCCAGTGCTGCGTGAGTGGGACAGACTGTAACTCCTTGTGTTaGCCAGGCAGACCATCCACA +
Preference number: 4 (lower is better)
Translates to: LHECPGARLIQCCVSGTDCNSLC*PGRPST
Trigger: TGTGGATGGTCTGCCTGGTCAACACAAGGAGTTACA...GTCTGTCCCACTCACGCAGCACTGGATCAGTCGGGCTCCGGGGCACTCGTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR TCA 90 bp CTGCACGAGTGCCCCGGAGCCCGACTGATCCAGTGCTGCGTGAGTGGGACAGACGGACAGACCCACCTTTaGCTTCTGATCTCACGAACA +
Preference number: 4 (lower is better)
Translates to: LHECPGARLIQCCVSGTDGQTHL*LLISRT
Trigger: TGTTCGTGAGATCAGAAGTCAAAGGTGGGTCTGTCC...GTCTGTCCCACTCACGCAGCACTGGATCAGTCGGGCTCCGGGGCACTCGTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR GCA 90 bp GGCCATTCGCAGACAGGTTTGCCTCCCAGTACTCAAGGGAGAAGCCCCTACACACAAGCCGCCTGCTGCTaGTCCTGCTGGTCCAGGACA +
Preference number: 4 (lower is better)
Translates to: GHSQTGLPPSTQGRSPYTQAACC*SCWSRT
Trigger: TGTCCTGGACCAGCAGGAGCAGCAGCAGGCGGCTTG...TGTGTAGGGGCTTCTCCCTTGAGTACTGGGAGGCAAACCTGTCTGCGAATGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419717.3
ENST00000545940.6
CDS-3UTR GCA 90 bp CCTGGAGGGAAAATCCACCCTACTCTGCCCTGCCTAGGCCATTCGCAGACAGGTGCTCTGTCCGTCCACTaGTTGTGCCCAGACCCTCCT +
Preference number: 4 (lower is better)
Translates to: PGGKIHPTLPCLGHSQTGALSVH*LCPDPP
Trigger: AGGAGGGTCTGGGCACAAGCAGTGGACGGACAGAGC...ACCTGTCTGCGAATGGCCTAGGCAGGGCAGAGTAGGGTGGATTTTCCCTCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR GCA 90 bp ACCTGGAGGGAAAATCCACCCTACTCTGCCCTGCCTAGGCCATTCGCAGACAGGGCTCTGTCCGTCCACTaGTTGTGCCCAGACCCTCCT +
Preference number: 4 (lower is better)
Translates to: TWRENPPYSALPRPFADRALSVH*LCPDPP
Trigger: AGGAGGGTCTGGGCACAAGCAGTGGACGGACAGAGC...CCTGTCTGCGAATGGCCTAGGCAGGGCAGAGTAGGGTGGATTTTCCCTCCAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR GCA 90 bp ACCTGGAGGGAAAATCCACCCTACTCTGCCCTGCCTAGGCCATTCGCAGACAGGGTGTCACCAGGAAGCTaGCCACCCGTAGCTCTGTCC +
Preference number: 4 (lower is better)
Translates to: TWRENPPYSALPRPFADRVSPGS*PPVALS
Trigger: GGACAGAGCTACGGGTGGGCAGCTTCCTGGTGACAC...CCTGTCTGCGAATGGCCTAGGCAGGGCAGAGTAGGGTGGATTTTCCCTCCAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR GCA 90 bp AACACTCCCCTCTCTAGAATGGCCTTCTCTGCACGAGTGCCCCGGAGCCCGACTAAAAGTCTGGCTGTGTaGACGGGCAGACGGCAAGGC +
Preference number: 4 (lower is better)
Translates to: NTPLSRMAFSARVPRSPTKSLAV*TGRRQG
Trigger: GCCTTGCCGTCTGCCCGTGCACACAGCCAGACTTTT...AGTCGGGCTCCGGGGCACTCGTGCAGAGAAGGCCATTCTAGAGAGGGGAGTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR GCA 90 bp GTCTGGCTGTGTGCACGGGCAGACGGCAAGGCAGCCAGCAGCAGAACACTCCCCATTCGCAGACAGGTTTaGCTCCCAGTACTCAAGGGA +
Preference number: 4 (lower is better)
Translates to: VWLCARADGKAASSRTLPIRRQV*LPVLKG
Trigger: TCCCTTGAGTACTGGGAGGCAAACCTGTCTGCGAAT...GGGGAGTGTTCTGCTGCTGGCTGCCTTGCCGTCTGCCCGTGCACACAGCCAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR CCA 90 bp ATGGCCTTCTCTGCACGAGTGCCCCGGAGCCCGACTGATCCAGTGCTGCGTGAGACCAAAGGCTGCAGTTaGGCAAGGTCATCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: MAFSARVPRSPTDPVLRETKGCS*ARSSWK
Trigger: CTTCCAGGATGACCTTGCCCAACTGCAGCCTTTGGT...CTCACGCAGCACTGGATCAGTCGGGCTCCGGGGCACTCGTGCAGAGAAGGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419717.3
ENST00000545940.6
CDS-3UTR CCA 90 bp CCCTGCCTAGGCCATTCGCAGACAGGTTTGCCTCCCAGTACTCAAGGGAGAAGCCAGCCTTGCTGGGGTTaGTGTTCACCCCCACAGCGA +
Preference number: 4 (lower is better)
Translates to: PCLGHSQTGLPPSTQGRSQPCWG*CSPPQR
Trigger: TCGCTGTGGGGGTGAACACCAACCCCAGCAAGGCTG...GCTTCTCCCTTGAGTACTGGGAGGCAAACCTGTCTGCGAATGGCCTAGGCAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419717.3
ENST00000545940.6
CDS-3UTR CCA 90 bp ACCTGGAGGGAAAATCCACCCTACTCTGCCCTGCCTAGGCCATTCGCAGACAGGTCCTGGGGTGCTGTCTaGCTCCTGGGGATAGCTCAG +
Preference number: 4 (lower is better)
Translates to: TWRENPPYSALPRPFADRSWGAV*LLGIAQ
Trigger: CTGAGCTATCCCCAGGAGCCAGACAGCACCCCAGGA...CCTGTCTGCGAATGGCCTAGGCAGGGCAGAGTAGGGTGGATTTTCCCTCCAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR CCA 90 bp GGCCATTCGCAGACAGGTTTGCCTCCCAGTACTCAAGGGAGAAGCCCCTACACAAGAAGAGGGGGAGGGTaGCAGGATCATGGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: GHSQTGLPPSTQGRSPYTRRGGG*QDHGQA
Trigger: GGCCTGGCCATGATCCTGCCACCCTCCCCCTCTTCT...TGTGTAGGGGCTTCTCCCTTGAGTACTGGGAGGCAAACCTGTCTGCGAATGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000545940.6
ENST00000673940.1
CDS-3UTR TCA 90 bp AACACTCCCCTCTCTAGAATGGCCTTCTCTGCACGAGTGCCCCGGAGCCCGACTTGTCCAGAATGGCTGTaGCCAAAGGCTGCAGTTGGG +
Preference number: 4 (lower is better)
Translates to: NTPLSRMAFSARVPRSPTCPEWL*PKAAVG
Trigger: CCCAACTGCAGCCTTTGGTCACAGCCATTCTGGACA...AGTCGGGCTCCGGGGCACTCGTGCAGAGAAGGCCATTCTAGAGAGGGGAGTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419717.3
ENST00000545940.6
CDS-3UTR TCA 90 bp ACCTGGAGGGAAAATCCACCCTACTCTGCCCTGCCTAGGCCATTCGCAGACAGGGCCCAGGCTGCTCCCTaGAAACTCAAGGAGCATCCT +
Preference number: 4 (lower is better)
Translates to: TWRENPPYSALPRPFADRAQAAP*KLKEHP
Trigger: AGGATGCTCCTTGAGTTTTCAGGGAGCAGCCTGGGC...CCTGTCTGCGAATGGCCTAGGCAGGGCAGAGTAGGGTGGATTTTCCCTCCAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR GCA 90 bp ATCCAGTGCTGCGTGAGTGGGACAGACCCACCTTTGACTTCTGATCTCACGAACCAGCTCCGCCGGGGGTaGACAGGTGTCCTCATGCTC +
Preference number: 4 (lower is better)
Translates to: IQCCVSGTDPPLTSDLTNQLRRG*TGVLML
Trigger: GAGCATGAGGACACCTGTGCACCCCCGGCGGAGCTG...GTTCGTGAGATCAGAAGTCAAAGGTGGGTCTGTCCCACTCACGCAGCACTGGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000419717.3
ENST00000545940.6
CDS-3UTR GCA 90 bp ATTACAACCTGGAGGGAAAATCCACCCTACTCTGCCCTGCCTAGGCCATTCGCAGCACTAACTCCTGGCTaGCTCCCGGCACCTGGCACC +
Preference number: 4 (lower is better)
Translates to: ITTWRENPPYSALPRPFAALTPG*LPAPGT
Trigger: GGTGCCAGGTGCCGGGAGGCAGCCAGGAGTTAGTGC...TGCGAATGGCCTAGGCAGGGCAGAGTAGGGTGGATTTTCCCTCCAGGTTGTAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419717.3
ENST00000545940.6
CDS-3UTR GCA 90 bp ATTACAACCTGGAGGGAAAATCCACCCTACTCTGCCCTGCCTAGGCCATTCGCAGGGTTGCCTGAGGGCTaGAGGAGGTCAGGACCCCTC +
Preference number: 4 (lower is better)
Translates to: ITTWRENPPYSALPRPFAGLPEG*RRSGPL
Trigger: GAGGGGTCCTGACCTCCTGCAGCCCTCAGGCAACCC...TGCGAATGGCCTAGGCAGGGCAGAGTAGGGTGGATTTTCCCTCCAGGTTGTAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR GCA 90 bp ACAACCTGGAGGGAAAATCCACCCTACTCTGCCCTGCCTAGGCCATTCGCAGACGCTCTGTCCGTCCACTaGTTGTGCCCAGACCCTCCT +
Preference number: 4 (lower is better)
Translates to: TTWRENPPYSALPRPFADALSVH*LCPDPP
Trigger: AGGAGGGTCTGGGCACAAGCAGTGGACGGACAGAGC...GTCTGCGAATGGCCTAGGCAGGGCAGAGTAGGGTGGATTTTCCCTCCAGGTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR GCA 90 bp ACCTGGAGGGAAAATCCACCCTACTCTGCCCTGCCTAGGCCATTCGCAGACAGGAAAAGTCTGGCTGTGTaGACGGGCAGACGGCAAGGC +
Preference number: 4 (lower is better)
Translates to: TWRENPPYSALPRPFADRKSLAV*TGRRQG
Trigger: GCCTTGCCGTCTGCCCGTGCACACAGCCAGACTTTT...CCTGTCTGCGAATGGCCTAGGCAGGGCAGAGTAGGGTGGATTTTCCCTCCAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR GCA 90 bp ATGGCCTTCTCTGCACGAGTGCCCCGGAGCCCGACTGATCCAGTGCTGCGTGAGATTCGCAGACAGGTTTaGCTCCCAGTACTCAAGGGA +
Preference number: 4 (lower is better)
Translates to: MAFSARVPRSPTDPVLREIRRQV*LPVLKG
Trigger: TCCCTTGAGTACTGGGAGGCAAACCTGTCTGCGAAT...CTCACGCAGCACTGGATCAGTCGGGCTCCGGGGCACTCGTGCAGAGAAGGCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR GCA 90 bp ACCTGGAGGGAAAATCCACCCTACTCTGCCCTGCCTAGGCCATTCGCAGACAGGCACCCTACTCTGCCCTaGCTAGGCCATTCGCAGACA +
Preference number: 4 (lower is better)
Translates to: TWRENPPYSALPRPFADRHPTLP*LGHSQT
Trigger: TGTCTGCGAATGGCCTAGGCAGGGCAGAGTAGGGTG...CCTGTCTGCGAATGGCCTAGGCAGGGCAGAGTAGGGTGGATTTTCCCTCCAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR GCA 90 bp AAGTCTGGCTGTGTGCACGGGCAGACGGCAAGGCAGCCAGCAGCAGAACACTCCCTTGGAGGACGCCAGTaGAAGAGACATCAGCCAAGA +
Preference number: 4 (lower is better)
Translates to: KSGCVHGQTARQPAAEHSLGGRQ*KRHQPR
Trigger: TCTTGGCTGATGTCTCTTGCACTGGCGTCCTCCAAG...GGAGTGTTCTGCTGCTGGCTGCCTTGCCGTCTGCCCGTGCACACAGCCAGACTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000545940.6
ENST00000673940.1
CDS-3UTR CCA 90 bp TTCGCAGACAGGTTTGCCTCCCAGTACTCAAGGGAGAAGCCCCTACACACAGAACCTGGCTCAGCTCCATaGCAGACACAGGGCCGGGGA +
Preference number: 4 (lower is better)
Translates to: FADRFASQYSREKPLHTEPGSAP*QTQGRG
Trigger: TCCCCGGCCCTGTGTCTGCCATGGAGCTGAGCCAGG...TTCTGTGTGTAGGGGCTTCTCCCTTGAGTACTGGGAGGCAAACCTGTCTGCGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR CCA 90 bp ACAACCTGGAGGGAAAATCCACCCTACTCTGCCCTGCCTAGGCCATTCGCAGACTCCTGGGGTGCTGTCTaGCTCCTGGGGATAGCTCAG +
Preference number: 4 (lower is better)
Translates to: TTWRENPPYSALPRPFADSWGAV*LLGIAQ
Trigger: CTGAGCTATCCCCAGGAGCCAGACAGCACCCCAGGA...GTCTGCGAATGGCCTAGGCAGGGCAGAGTAGGGTGGATTTTCCCTCCAGGTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR CCA 90 bp CCCTGCCTAGGCCATTCGCAGACAGGTTTGCCTCCCAGTACTCAAGGGAGAAGCCCAGTGCTGCGTGAGTaGGACAGACCCACCTTTGAC +
Preference number: 4 (lower is better)
Translates to: PCLGHSQTGLPPSTQGRSPVLRE*DRPTFD
Trigger: GTCAAAGGTGGGTCTGTCCCACTCACGCAGCACTGG...GCTTCTCCCTTGAGTACTGGGAGGCAAACCTGTCTGCGAATGGCCTAGGCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR CCA 90 bp ACCTGGAGGGAAAATCCACCCTACTCTGCCCTGCCTAGGCCATTCGCAGACAGGCCAGTGCTGCGTGAGTaGGACAGACCCACCTTTGAC +
Preference number: 4 (lower is better)
Translates to: TWRENPPYSALPRPFADRPVLRE*DRPTFD
Trigger: GTCAAAGGTGGGTCTGTCCCACTCACGCAGCACTGG...CCTGTCTGCGAATGGCCTAGGCAGGGCAGAGTAGGGTGGATTTTCCCTCCAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR CCA 90 bp AACACTCCCCTCTCTAGAATGGCCTTCTCTGCACGAGTGCCCCGGAGCCCGACTCTTGGTGGAAAAGTCTaGCTGTGTGCACGGGCAGAC +
Preference number: 4 (lower is better)
Translates to: NTPLSRMAFSARVPRSPTLGGKV*LCARAD
Trigger: GTCTGCCCGTGCACACAGCCAGACTTTTCCACCAAG...AGTCGGGCTCCGGGGCACTCGTGCAGAGAAGGCCATTCTAGAGAGGGGAGTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR TCA 90 bp CCCTGCCTAGGCCATTCGCAGACAGGTTTGCCTCCCAGTACTCAAGGGAGAAGCGACATCCAGTGGCTTTaGGACTGTCTCATCTGCGGG +
Preference number: 4 (lower is better)
Translates to: PCLGHSQTGLPPSTQGRSDIQWL*DCLICG
Trigger: CCCGCAGATGAGACAGTCTCAAAGCCACTGGATGTC...GCTTCTCCCTTGAGTACTGGGAGGCAAACCTGTCTGCGAATGGCCTAGGCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR TCA 90 bp GGCCATTCGCAGACAGGTTTGCCTCCCAGTACTCAAGGGAGAAGCCCCTACACAGCCCAGGCTGCTCCCTaGAAACTCAAGGAGCATCCT +
Preference number: 4 (lower is better)
Translates to: GHSQTGLPPSTQGRSPYTAQAAP*KLKEHP
Trigger: AGGATGCTCCTTGAGTTTTCAGGGAGCAGCCTGGGC...TGTGTAGGGGCTTCTCCCTTGAGTACTGGGAGGCAAACCTGTCTGCGAATGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR TCA 90 bp CTGCACGAGTGCCCCGGAGCCCGACTGATCCAGTGCTGCGTGAGTGGGACAGACCCCACCTTTGACTTCTaGTCTCACGAACATTTCTCA +
Preference number: 4 (lower is better)
Translates to: LHECPGARLIQCCVSGTDPTFDF*SHEHFS
Trigger: TGAGAAATGTTCGTGAGATCAGAAGTCAAAGGTGGG...GTCTGTCCCACTCACGCAGCACTGGATCAGTCGGGCTCCGGGGCACTCGTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR GCA 90 bp TTCGCAGACAGGTTTGCCTCCCAGTACTCAAGGGAGAAGCCCCTACACACAGAAGCGTTGTCCAGGAGATaGAGGCGGAGCTGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: FADRFASQYSREKPLHTEALSRR*RRSWLS
Trigger: GGACAGCCAGCTCCGCCTGCATCTCCTGGACAACGC...TTCTGTGTGTAGGGGCTTCTCCCTTGAGTACTGGGAGGCAAACCTGTCTGCGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419717.3
ENST00000545940.6
CDS-3UTR GCA 90 bp AACACTCCCCTCTCTAGAATGGCCTTCTCTGCACGAGTGCCCCGGAGCCCGACTAACCAGTTGTACACCTaGTCAGGGGTCAAGCTCGTC +
Preference number: 4 (lower is better)
Translates to: NTPLSRMAFSARVPRSPTNQLYT*SGVKLV
Trigger: GACGAGCTTGACCCCTGAGCAGGTGTACAACTGGTT...AGTCGGGCTCCGGGGCACTCGTGCAGAGAAGGCCATTCTAGAGAGGGGAGTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000419717.3
ENST00000545940.6
CDS-3UTR GCA 90 bp CCCTGCCTAGGCCATTCGCAGACAGGTTTGCCTCCCAGTACTCAAGGGAGAAGCTCCGTCCACTGCTTGTaGCCAGACCCTCCTCCAATT +
Preference number: 4 (lower is better)
Translates to: PCLGHSQTGLPPSTQGRSSVHCL*PDPPPI
Trigger: AATTGGAGGAGGGTCTGGGCACAAGCAGTGGACGGA...GCTTCTCCCTTGAGTACTGGGAGGCAAACCTGTCTGCGAATGGCCTAGGCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR GCA 90 bp GGCCATTCGCAGACAGGTTTGCCTCCCAGTACTCAAGGGAGAAGCCCCTACACATGGCTATCAGAACACTaGACCTGGCTGGAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: GHSQTGLPPSTQGRSPYTWLSEH*TWLEGR
Trigger: CCTGCCCTCCAGCCAGGTGCAGTGTTCTGATAGCCA...TGTGTAGGGGCTTCTCCCTTGAGTACTGGGAGGCAAACCTGTCTGCGAATGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR GCA 90 bp GGCCATTCGCAGACAGGTTTGCCTCCCAGTACTCAAGGGAGAAGCCCCTACACACGACTGATCCAGTGCTaGGTGAGTGGGACAGACCCA +
Preference number: 4 (lower is better)
Translates to: GHSQTGLPPSTQGRSPYTRLIQC*VSGTDP
Trigger: TGGGTCTGTCCCACTCACGCAGCACTGGATCAGTCG...TGTGTAGGGGCTTCTCCCTTGAGTACTGGGAGGCAAACCTGTCTGCGAATGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR GCA 90 bp ATTACAACCTGGAGGGAAAATCCACCCTACTCTGCCCTGCCTAGGCCATTCGCACCTTCTCTGCACGAGTaGCCCGGAGCCCGACTGATC +
Preference number: 4 (lower is better)
Translates to: ITTWRENPPYSALPRPFAPSLHE*PGARLI
Trigger: GATCAGTCGGGCTCCGGGGCACTCGTGCAGAGAAGG...TGCGAATGGCCTAGGCAGGGCAGAGTAGGGTGGATTTTCCCTCCAGGTTGTAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR GCA 90 bp GGCCATTCGCAGACAGGTTTGCCTCCCAGTACTCAAGGGAGAAGCCCCTACACAAAAAGTCTGGCTGTGTaGACGGGCAGACGGCAAGGC +
Preference number: 4 (lower is better)
Translates to: GHSQTGLPPSTQGRSPYTKSLAV*TGRRQG
Trigger: GCCTTGCCGTCTGCCCGTGCACACAGCCAGACTTTT...TGTGTAGGGGCTTCTCCCTTGAGTACTGGGAGGCAAACCTGTCTGCGAATGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR CCA 90 bp TTTGCCTCCCAGTACTCAAGGGAGAAGCCCCTACACACAGAAATCTCAGAACACTCCTGTGCTGGGTCGTaGCCACTCCTCCGGGACCCG +
Preference number: 4 (lower is better)
Translates to: FASQYSREKPLHTEISEHSCAGS*PLLRDP
Trigger: CGGGTCCCGGAGGAGTGGCCACGACCCAGCACAGGA...GTGTTCTGAGATTTCTGTGTGTAGGGGCTTCTCCCTTGAGTACTGGGAGGCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419717.3
ENST00000545940.6
CDS-3UTR CCA 90 bp ACCTGGAGGGAAAATCCACCCTACTCTGCCCTGCCTAGGCCATTCGCAGACAGGGGCGGCGCCGGTAATTaGCAAACCAGTTGTACACCT +
Preference number: 4 (lower is better)
Translates to: TWRENPPYSALPRPFADRGGAGN*QTSCTP
Trigger: AGGTGTACAACTGGTTTGCCAATTACCGGCGCCGCC...CCTGTCTGCGAATGGCCTAGGCAGGGCAGAGTAGGGTGGATTTTCCCTCCAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR CCA 90 bp CCTGGAGGGAAAATCCACCCTACTCTGCCCTGCCTAGGCCATTCGCAGACAGGTGGCGGCGCCGGTAATTaGCAAACCAGTTGTACACCT +
Preference number: 4 (lower is better)
Translates to: PGGKIHPTLPCLGHSQTGGGAGN*QTSCTP
Trigger: AGGTGTACAACTGGTTTGCCAATTACCGGCGCCGCC...ACCTGTCTGCGAATGGCCTAGGCAGGGCAGAGTAGGGTGGATTTTCCCTCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR CCA 90 bp CCTGGAGGGAAAATCCACCCTACTCTGCCCTGCCTAGGCCATTCGCAGACAGGTTTCAGGAGCTTGCAGTaGGGGCTGTGTCACCAGGAA +
Preference number: 4 (lower is better)
Translates to: PGGKIHPTLPCLGHSQTGFRSLQ*GLCHQE
Trigger: TTCCTGGTGACACAGCCCCCACTGCAAGCTCCTGAA...ACCTGTCTGCGAATGGCCTAGGCAGGGCAGAGTAGGGTGGATTTTCCCTCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR CCA 90 bp ATCCAGTGCTGCGTGAGTGGGACAGACCCACCTTTGACTTCTGATCTCACGAACTCAGAACACTGCACCTaGCTGGAGGGCAGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: IQCCVSGTDPPLTSDLTNSEHCT*LEGRAW
Trigger: CCAGGCCCTGCCCTCCAGCCAGGTGCAGTGTTCTGA...GTTCGTGAGATCAGAAGTCAAAGGTGGGTCTGTCCCACTCACGCAGCACTGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR CCA 90 bp CCCTGCCTAGGCCATTCGCAGACAGGTTTGCCTCCCAGTACTCAAGGGAGAAGCCTTGGTGGAAAAGTCTaGCTGTGTGCACGGGCAGAC +
Preference number: 4 (lower is better)
Translates to: PCLGHSQTGLPPSTQGRSLGGKV*LCARAD
Trigger: GTCTGCCCGTGCACACAGCCAGACTTTTCCACCAAG...GCTTCTCCCTTGAGTACTGGGAGGCAAACCTGTCTGCGAATGGCCTAGGCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR CCA 90 bp GTCTGGCTGTGTGCACGGGCAGACGGCAAGGCAGCCAGCAGCAGAACACTCCCCCTCACTCAGTTAACTTaGTGGAAAAGTCTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: VWLCARADGKAASSRTLPLTQLT*WKSLAV
Trigger: CACAGCCAGACTTTTCCACCAAGTTAACTGAGTGAG...GGGGAGTGTTCTGCTGCTGGCTGCCTTGCCGTCTGCCCGTGCACACAGCCAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR CCA 90 bp ATCCAGTGCTGCGTGAGTGGGACAGACCCACCTTTGACTTCTGATCTCACGAACAGGGTGGCAGGATCATaGCCAGGCCCCTCCTGGTAC +
Preference number: 4 (lower is better)
Translates to: IQCCVSGTDPPLTSDLTNRVAGS*PGPSWY
Trigger: GTACCAGGAGGGGCCTGGCCATGATCCTGCCACCCT...GTTCGTGAGATCAGAAGTCAAAGGTGGGTCTGTCCCACTCACGCAGCACTGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545940.6
ENST00000673940.1
3UTR CAA 72 bp CCTACTCTGCCCTGCCTAGGCCATTCGCAGACAGGTTaGCCTCCCAGTACTCAAGGGAGAAGCCCCTACACA +
Preference number: 4 (lower is better)
Translates to: PTLPCLGHSQTG*PPSTQGRSPYT
Trigger: TGTGTAGGGGCTTCTCCCTTGAGTACTGGGAGGCAAACCTGTCTGCGAATGGCCTAGGCAGGGCAGAGTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR GCA 90 bp CATAGACACAGTGAATTACAACCTGGAGGGAAAATCCACCCTACTCTGCCCTGCGCACTAACTCCTGGCTaGCTCCCGGCACCTGGCACC +
Preference number: 4 (lower is better)
Translates to: HRHSELQPGGKIHPTLPCALTPG*LPAPGT
Trigger: GGTGCCAGGTGCCGGGAGGCAGCCAGGAGTTAGTGC...GCAGGGCAGAGTAGGGTGGATTTTCCCTCCAGGTTGTAATTCACTGTGTCTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419717.3
ENST00000545940.6
CDS-3UTR GCA 90 bp ATCCAGTGCTGCGTGAGTGGGACAGACCCACCTTTGACTTCTGATCTCACGAACGGGGGTTCCTCTTCCTaGAGCGGAACTTCTGCACCG +
Preference number: 4 (lower is better)
Translates to: IQCCVSGTDPPLTSDLTNGGSSS*SGTSAP
Trigger: CGGTGCAGAAGTTCCGCTGCAGGAAGAGGAACCCCC...GTTCGTGAGATCAGAAGTCAAAGGTGGGTCTGTCCCACTCACGCAGCACTGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000419717.3
ENST00000545940.6
CDS-3UTR GCA 90 bp ATTACAACCTGGAGGGAAAATCCACCCTACTCTGCCCTGCCTAGGCCATTCGCAAGTCAACACGGGGGTTaGCTGAGGGCTGCAGGAGGT +
Preference number: 4 (lower is better)
Translates to: ITTWRENPPYSALPRPFASQHGG*LRAAGG
Trigger: ACCTCCTGCAGCCCTCAGGCAACCCCCGTGTTGACT...TGCGAATGGCCTAGGCAGGGCAGAGTAGGGTGGATTTTCCCTCCAGGTTGTAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR GCA 90 bp ACAACCTGGAGGGAAAATCCACCCTACTCTGCCCTGCCTAGGCCATTCGCAGACTCCGTCCACTGCTTGTaGCCAGACCCTCCTCCAATT +
Preference number: 4 (lower is better)
Translates to: TTWRENPPYSALPRPFADSVHCL*PDPPPI
Trigger: AATTGGAGGAGGGTCTGGGCACAAGCAGTGGACGGA...GTCTGCGAATGGCCTAGGCAGGGCAGAGTAGGGTGGATTTTCCCTCCAGGTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR GCA 90 bp ATCCAGTGCTGCGTGAGTGGGACAGACCCACCTTTGACTTCTGATCTCACGAACGTGTCACCAGGAAGCTaGCCACCCGTAGCTCTGTCC +
Preference number: 4 (lower is better)
Translates to: IQCCVSGTDPPLTSDLTNVSPGS*PPVALS
Trigger: GGACAGAGCTACGGGTGGGCAGCTTCCTGGTGACAC...GTTCGTGAGATCAGAAGTCAAAGGTGGGTCTGTCCCACTCACGCAGCACTGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR GCA 90 bp ACAACCTGGAGGGAAAATCCACCCTACTCTGCCCTGCCTAGGCCATTCGCAGACTGGCTGTGGACCAGCTaGCCAGTCTGGAAGGAAACT +
Preference number: 4 (lower is better)
Translates to: TTWRENPPYSALPRPFADWLWTS*PVWKET
Trigger: AGTTTCCTTCCAGACTGGGCAGCTGGTCCACAGCCA...GTCTGCGAATGGCCTAGGCAGGGCAGAGTAGGGTGGATTTTCCCTCCAGGTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545940.6
ENST00000673940.1
CDS-3UTR CCA 90 bp ATTACAACCTGGAGGGAAAATCCACCCTACTCTGCCCTGCCTAGGCCATTCGCACCCATGGTCCTTGGGTaGTCTGTGGGGACTGTGGAG +
Preference number: 4 (lower is better)
Translates to: ITTWRENPPYSALPRPFAPMVLG*SVGTVE
Trigger: CTCCACAGTCCCCACAGACCACCCAAGGACCATGGG...TGCGAATGGCCTAGGCAGGGCAGAGTAGGGTGGATTTTCCCTCCAGGTTGTAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR CCA 90 bp CATAGACACAGTGAATTACAACCTGGAGGGAAAATCCACCCTACTCTGCCCTGCGAAGGCAGATGGGGCTaGGGCCAGCTCTGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: HRHSELQPGGKIHPTLPCEGRWG*GQLWRA
Trigger: AGCCCTCCAGAGCTGGCCCCAGCCCCATCTGCCTTC...GCAGGGCAGAGTAGGGTGGATTTTCCCTCCAGGTTGTAATTCACTGTGTCTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR CCA 90 bp TTTGCCTCCCAGTACTCAAGGGAGAAGCCCCTACACACAGAAATCTCAGAACACGAAGGCAGATGGGGCTaGGGCCAGCTCTGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: FASQYSREKPLHTEISEHEGRWG*GQLWRA
Trigger: AGCCCTCCAGAGCTGGCCCCAGCCCCATCTGCCTTC...GTGTTCTGAGATTTCTGTGTGTAGGGGCTTCTCCCTTGAGTACTGGGAGGCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR CCA 90 bp GGCCATTCGCAGACAGGTTTGCCTCCCAGTACTCAAGGGAGAAGCCCCTACACAACTCAAGGAGCATCCTaGCTCCCCAGAAGGCATCAC +
Preference number: 4 (lower is better)
Translates to: GHSQTGLPPSTQGRSPYTTQGAS*LPRRHH
Trigger: GTGATGCCTTCTGGGGAGCCAGGATGCTCCTTGAGT...TGTGTAGGGGCTTCTCCCTTGAGTACTGGGAGGCAAACCTGTCTGCGAATGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR TCA 90 bp AGTGAATTACAACCTGGAGGGAAAATCCACCCTACTCTGCCCTGCCTAGGCCATCGCCCAGCCTCCTCATaGCCAGACGGTAGTGGATGT +
Preference number: 4 (lower is better)
Translates to: SELQPGGKIHPTLPCLGHRPASS*PDGSGC
Trigger: ACATCCACTACCGTCTGGTCATGAGGAGGCTGGGCG...ATGGCCTAGGCAGGGCAGAGTAGGGTGGATTTTCCCTCCAGGTTGTAATTCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419717.3
ENST00000545940.6
CDS-3UTR GCA 90 bp ATTACAACCTGGAGGGAAAATCCACCCTACTCTGCCCTGCCTAGGCCATTCGCAAAGCTCTGCATCCTGTaGTGGGTCGTGGCCACTCCT +
Preference number: 4 (lower is better)
Translates to: ITTWRENPPYSALPRPFAKLCIL*WVVATP
Trigger: AGGAGTGGCCACGACCCAGCACAGGATGCAGAGCTT...TGCGAATGGCCTAGGCAGGGCAGAGTAGGGTGGATTTTCCCTCCAGGTTGTAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419717.3
ENST00000545940.6
CDS-3UTR GCA 90 bp TGCGTGAGTGGGACAGACCCACCTTTGACTTCTGATCTCACGAACATTTCTCAACTGCAGCGGAACTTCTaGACCGGGGTGAGCGCAGCC +
Preference number: 4 (lower is better)
Translates to: CVSGTDPPLTSDLTNISQLQRNF*TGVSAA
Trigger: GGCTGCGCTCACCCCGGTGCAGAAGTTCCGCTGCAG...TTGAGAAATGTTCGTGAGATCAGAAGTCAAAGGTGGGTCTGTCCCACTCACGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419717.3
ENST00000545940.6
CDS-3UTR GCA 90 bp GGCCATTCGCAGACAGGTTTGCCTCCCAGTACTCAAGGGAGAAGCCCCTACACACAAGCTCGTCTCCAATaGCAAGTTCTCCCTCTCAGC +
Preference number: 4 (lower is better)
Translates to: GHSQTGLPPSTQGRSPYTQARLQ*QVLPLS
Trigger: GCTGAGAGGGAGAACTTGGCATTGGAGACGAGCTTG...TGTGTAGGGGCTTCTCCCTTGAGTACTGGGAGGCAAACCTGTCTGCGAATGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419717.3
ENST00000545940.6
CDS-3UTR GCA 90 bp AGTGAATTACAACCTGGAGGGAAAATCCACCCTACTCTGCCCTGCCTAGGCCATAGTCAACACGGGGGTTaGCTGAGGGCTGCAGGAGGT +
Preference number: 4 (lower is better)
Translates to: SELQPGGKIHPTLPCLGHSQHGG*LRAAGG
Trigger: ACCTCCTGCAGCCCTCAGGCAACCCCCGTGTTGACT...ATGGCCTAGGCAGGGCAGAGTAGGGTGGATTTTCCCTCCAGGTTGTAATTCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR GCA 90 bp ACAACCTGGAGGGAAAATCCACCCTACTCTGCCCTGCCTAGGCCATTCGCAGACATGAATTCAGGAGCTTaGAGTGGGGGCTGTGTCACC +
Preference number: 4 (lower is better)
Translates to: TTWRENPPYSALPRPFADMNSGA*SGGCVT
Trigger: GGTGACACAGCCCCCACTGCAAGCTCCTGAATTCAT...GTCTGCGAATGGCCTAGGCAGGGCAGAGTAGGGTGGATTTTCCCTCCAGGTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR GCA 90 bp TTCGCAGACAGGTTTGCCTCCCAGTACTCAAGGGAGAAGCCCCTACACACAGAACGACTGATCCAGTGCTaGGTGAGTGGGACAGACCCA +
Preference number: 4 (lower is better)
Translates to: FADRFASQYSREKPLHTERLIQC*VSGTDP
Trigger: TGGGTCTGTCCCACTCACGCAGCACTGGATCAGTCG...TTCTGTGTGTAGGGGCTTCTCCCTTGAGTACTGGGAGGCAAACCTGTCTGCGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR CCA 90 bp TTCGCAGACAGGTTTGCCTCCCAGTACTCAAGGGAGAAGCCCCTACACACAGAAAGATGCAGGCGGAGCTaGCTGTCCAGAATGGCTGTG +
Preference number: 4 (lower is better)
Translates to: FADRFASQYSREKPLHTERCRRS*LSRMAV
Trigger: CACAGCCATTCTGGACAGCCAGCTCCGCCTGCATCT...TTCTGTGTGTAGGGGCTTCTCCCTTGAGTACTGGGAGGCAAACCTGTCTGCGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419717.3
ENST00000545940.6
CDS-3UTR CCA 90 bp ATAGACACAGTGAATTACAACCTGGAGGGAAAATCCACCCTACTCTGCCCTGCCTCAGAACACTGCACCTaGCTGGAGGGCAGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: IDTVNYNLEGKSTLLCPASEHCT*LEGRAW
Trigger: CCAGGCCCTGCCCTCCAGCCAGGTGCAGTGTTCTGA...GGCAGGGCAGAGTAGGGTGGATTTTCCCTCCAGGTTGTAATTCACTGTGTCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR TCA 90 bp AACACTCCCCTCTCTAGAATGGCCTTCTCTGCACGAGTGCCCCGGAGCCCGACTCCCACCTTTGACTTCTaGTCTCACGAACATTTCTCA +
Preference number: 4 (lower is better)
Translates to: NTPLSRMAFSARVPRSPTPTFDF*SHEHFS
Trigger: TGAGAAATGTTCGTGAGATCAGAAGTCAAAGGTGGG...AGTCGGGCTCCGGGGCACTCGTGCAGAGAAGGCCATTCTAGAGAGGGGAGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR TCA 90 bp GGCCATTCGCAGACAGGTTTGCCTCCCAGTACTCAAGGGAGAAGCCCCTACACAGGACAGACCCACCTTTaGCTTCTGATCTCACGAACA +
Preference number: 4 (lower is better)
Translates to: GHSQTGLPPSTQGRSPYTGQTHL*LLISRT
Trigger: TGTTCGTGAGATCAGAAGTCAAAGGTGGGTCTGTCC...TGTGTAGGGGCTTCTCCCTTGAGTACTGGGAGGCAAACCTGTCTGCGAATGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR GCA 90 bp ATCCAGTGCTGCGTGAGTGGGACAGACCCACCTTTGACTTCTGATCTCACGAACAGAGTCAGGAAGCTCTaGATCCTGTGCTGGGTCGTG +
Preference number: 4 (lower is better)
Translates to: IQCCVSGTDPPLTSDLTNRVRKL*ILCWVV
Trigger: CACGACCCAGCACAGGATGCAGAGCTTCCTGACTCT...GTTCGTGAGATCAGAAGTCAAAGGTGGGTCTGTCCCACTCACGCAGCACTGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419717.3
ENST00000545940.6
CDS-3UTR GCA 90 bp AGTGAATTACAACCTGGAGGGAAAATCCACCCTACTCTGCCCTGCCTAGGCCATTGGGCTGGCTTCATGTaGTGGGGAAGGGCTCTTTGG +
Preference number: 4 (lower is better)
Translates to: SELQPGGKIHPTLPCLGHWAGFM*WGRALW
Trigger: CCAAAGAGCCCTTCCCCAGCACATGAAGCCAGCCCA...ATGGCCTAGGCAGGGCAGAGTAGGGTGGATTTTCCCTCCAGGTTGTAATTCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR GCA 90 bp AGTGAATTACAACCTGGAGGGAAAATCCACCCTACTCTGCCCTGCCTAGGCCATTCTTCAGCTGTGGCCTaGTGGGCTGGCTTCATGTGC +
Preference number: 4 (lower is better)
Translates to: SELQPGGKIHPTLPCLGHSSAVA*WAGFMC
Trigger: GCACATGAAGCCAGCCCAGCAGGCCACAGCTGAAGA...ATGGCCTAGGCAGGGCAGAGTAGGGTGGATTTTCCCTCCAGGTTGTAATTCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR GCA 90 bp TTCGCAGACAGGTTTGCCTCCCAGTACTCAAGGGAGAAGCCCCTACACACAGAATCCGTCCACTGCTTGTaGCCAGACCCTCCTCCAATT +
Preference number: 4 (lower is better)
Translates to: FADRFASQYSREKPLHTESVHCL*PDPPPI
Trigger: AATTGGAGGAGGGTCTGGGCACAAGCAGTGGACGGA...TTCTGTGTGTAGGGGCTTCTCCCTTGAGTACTGGGAGGCAAACCTGTCTGCGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR GCA 90 bp CATAGACACAGTGAATTACAACCTGGAGGGAAAATCCACCCTACTCTGCCCTGCGCCCGACTGATCCAGTaGTGCGTGAGTGGGACAGAC +
Preference number: 4 (lower is better)
Translates to: HRHSELQPGGKIHPTLPCARLIQ*CVSGTD
Trigger: GTCTGTCCCACTCACGCAGCACTGGATCAGTCGGGC...GCAGGGCAGAGTAGGGTGGATTTTCCCTCCAGGTTGTAATTCACTGTGTCTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR GCA 90 bp ATCCAGTGCTGCGTGAGTGGGACAGACCCACCTTTGACTTCTGATCTCACGAACTGGCTGTGGACCAGCTaGCCAGTCTGGAAGGAAACT +
Preference number: 4 (lower is better)
Translates to: IQCCVSGTDPPLTSDLTNWLWTS*PVWKET
Trigger: AGTTTCCTTCCAGACTGGGCAGCTGGTCCACAGCCA...GTTCGTGAGATCAGAAGTCAAAGGTGGGTCTGTCCCACTCACGCAGCACTGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000545940.6
ENST00000673940.1
CDS-3UTR CCA 90 bp TGCGTGAGTGGGACAGACCCACCTTTGACTTCTGATCTCACGAACATTTCTCAAAGCTGCACTAACTCCTaGCTGCCTCCCGGCACCTGG +
Preference number: 4 (lower is better)
Translates to: CVSGTDPPLTSDLTNISQSCTNS*LPPGTW
Trigger: CCAGGTGCCGGGAGGCAGCCAGGAGTTAGTGCAGCT...TTGAGAAATGTTCGTGAGATCAGAAGTCAAAGGTGGGTCTGTCCCACTCACGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419717.3
ENST00000545940.6
CDS-3UTR CCA 90 bp ATAGACACAGTGAATTACAACCTGGAGGGAAAATCCACCCTACTCTGCCCTGCCTGTGGCCTGCTGGGCTaGCTTCATGTGCTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: IDTVNYNLEGKSTLLCPACGLLG*LHVLGK
Trigger: CTTCCCCAGCACATGAAGCCAGCCCAGCAGGCCACA...GGCAGGGCAGAGTAGGGTGGATTTTCCCTCCAGGTTGTAATTCACTGTGTCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR CCA 90 bp ATAGACACAGTGAATTACAACCTGGAGGGAAAATCCACCCTACTCTGCCCTGCCCAGGGTCTTCAGCTGTaGCCTGCTGGGCTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: IDTVNYNLEGKSTLLCPAQGLQL*PAGLAS
Trigger: TGAAGCCAGCCCAGCAGGCCACAGCTGAAGACCCTG...GGCAGGGCAGAGTAGGGTGGATTTTCCCTCCAGGTTGTAATTCACTGTGTCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR CCA 90 bp TTCGCAGACAGGTTTGCCTCCCAGTACTCAAGGGAGAAGCCCCTACACACAGAATTCAGGAGCTTGCAGTaGGGGCTGTGTCACCAGGAA +
Preference number: 4 (lower is better)
Translates to: FADRFASQYSREKPLHTEFRSLQ*GLCHQE
Trigger: TTCCTGGTGACACAGCCCCCACTGCAAGCTCCTGAA...TTCTGTGTGTAGGGGCTTCTCCCTTGAGTACTGGGAGGCAAACCTGTCTGCGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR CCA 90 bp TTTGCCTCCCAGTACTCAAGGGAGAAGCCCCTACACACAGAAATCTCAGAACACTCCTGGGGTGCTGTCTaGCTCCTGGGGATAGCTCAG +
Preference number: 4 (lower is better)
Translates to: FASQYSREKPLHTEISEHSWGAV*LLGIAQ
Trigger: CTGAGCTATCCCCAGGAGCCAGACAGCACCCCAGGA...GTGTTCTGAGATTTCTGTGTGTAGGGGCTTCTCCCTTGAGTACTGGGAGGCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR CCA 90 bp GTCTGGCTGTGTGCACGGGCAGACGGCAAGGCAGCCAGCAGCAGAACACTCCCCATTCAAACATGGCAGTaGGAAAGAATCTCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: VWLCARADGKAASSRTLPIQTWQ*ERISAF
Trigger: AAAAGCAGAGATTCTTTCCCACTGCCATGTTTGAAT...GGGGAGTGTTCTGCTGCTGGCTGCCTTGCCGTCTGCCCGTGCACACAGCCAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR CCA 90 bp TTCGCAGACAGGTTTGCCTCCCAGTACTCAAGGGAGAAGCCCCTACACACAGAACTCCCCTCTCTAGAATaGCCTTCTCTGCACGAGTGC +
Preference number: 4 (lower is better)
Translates to: FADRFASQYSREKPLHTELPSLE*PSLHEC
Trigger: GCACTCGTGCAGAGAAGGCCATTCTAGAGAGGGGAG...TTCTGTGTGTAGGGGCTTCTCCCTTGAGTACTGGGAGGCAAACCTGTCTGCGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR GCA 90 bp CATTTGTGTCATAGACACAGTGAATTACAACCTGGAGGGAAAATCCACCCTACTCGGCAAGCCGCCTGCTaGTGCTCCTGCTGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: HLCHRHSELQPGGKIHPTRQAAC*CSCWSR
Trigger: CCTGGACCAGCAGGAGCAGCAGCAGGCGGCTTGCCG...AGTAGGGTGGATTTTCCCTCCAGGTTGTAATTCACTGTGTCTATGACACAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419717.3
ENST00000545940.6
CDS-3UTR GCA 90 bp TTCGCAGACAGGTTTGCCTCCCAGTACTCAAGGGAGAAGCCCCTACACACAGAAATGTCGTTCCAGAGCTaGACTAACTCCTGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: FADRFASQYSREKPLHTEMSFQS*TNSWLP
Trigger: AGGCAGCCAGGAGTTAGTGCAGCTCTGGAACGACAT...TTCTGTGTGTAGGGGCTTCTCCCTTGAGTACTGGGAGGCAAACCTGTCTGCGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419717.3
ENST00000545940.6
CDS-3UTR GCA 90 bp TGCGTGAGTGGGACAGACCCACCTTTGACTTCTGATCTCACGAACATTTCTCAAGGGGGTTCCTCTTCCTaGAGCGGAACTTCTGCACCG +
Preference number: 4 (lower is better)
Translates to: CVSGTDPPLTSDLTNISQGGSSS*SGTSAP
Trigger: CGGTGCAGAAGTTCCGCTGCAGGAAGAGGAACCCCC...TTGAGAAATGTTCGTGAGATCAGAAGTCAAAGGTGGGTCTGTCCCACTCACGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000419717.3
ENST00000545940.6
CDS-3UTR GCA 90 bp TTCGCAGACAGGTTTGCCTCCCAGTACTCAAGGGAGAAGCCCCTACACACAGAAAACCAGTTGTACACCTaGTCAGGGGTCAAGCTCGTC +
Preference number: 4 (lower is better)
Translates to: FADRFASQYSREKPLHTENQLYT*SGVKLV
Trigger: GACGAGCTTGACCCCTGAGCAGGTGTACAACTGGTT...TTCTGTGTGTAGGGGCTTCTCCCTTGAGTACTGGGAGGCAAACCTGTCTGCGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000419717.3
ENST00000545940.6
CDS-3UTR GCA 90 bp TTTGCCTCCCAGTACTCAAGGGAGAAGCCCCTACACACAGAAATCTCAGAACACCACCCTACTCTGCCCTaGCTAGGCCATTCGCAGACA +
Preference number: 4 (lower is better)
Translates to: FASQYSREKPLHTEISEHHPTLP*LGHSQT
Trigger: TGTCTGCGAATGGCCTAGGCAGGGCAGAGTAGGGTG...GTGTTCTGAGATTTCTGTGTGTAGGGGCTTCTCCCTTGAGTACTGGGAGGCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR CCA 90 bp ATAGACACAGTGAATTACAACCTGGAGGGAAAATCCACCCTACTCTGCCCTGCCTGGGCAAGGTCATCCTaGAAGTCCCGGCACAGTCTG +
Preference number: 4 (lower is better)
Translates to: IDTVNYNLEGKSTLLCPAWARSS*KSRHSL
Trigger: CAGACTGTGCCGGGACTTCCAGGATGACCTTGCCCA...GGCAGGGCAGAGTAGGGTGGATTTTCCCTCCAGGTTGTAATTCACTGTGTCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419717.3
ENST00000545940.6
CDS-3UTR CCA 90 bp CTCAAATGCTTTCTCTACTACAGGGAATTGCTAACCAAACTATTCAAACATGGCCTGCCTCCCGGCACCTaGCACCCCTCCAGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: LKCFLYYRELLTKLFKHGLPPGT*HPSRRR
Trigger: CCGCCTCCTGGAGGGGTGCCAGGTGCCGGGAGGCAG...GCCATGTTTGAATAGTTTGGTTAGCAATTCCCTGTAGTAGAGAAAGCATTTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419717.3
ENST00000545940.6
CDS-3UTR CCA 90 bp TTCGCAGACAGGTTTGCCTCCCAGTACTCAAGGGAGAAGCCCCTACACACAGAATCTCACGAACCTCTCTaGGGAAGTTCCGGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: FADRFASQYSREKPLHTESHEPL*GSSGSS
Trigger: TGAAGAGCCGGAACTTCCCCAGAGAGGTTCGTGAGA...TTCTGTGTGTAGGGGCTTCTCCCTTGAGTACTGGGAGGCAAACCTGTCTGCGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419717.3
ENST00000545940.6
CDS-3UTR CCA 90 bp TGCGTGAGTGGGACAGACCCACCTTTGACTTCTGATCTCACGAACATTTCTCAACAGCCTTGCTGGGGTTaGTGTTCACCCCCACAGCGA +
Preference number: 4 (lower is better)
Translates to: CVSGTDPPLTSDLTNISQQPCWG*CSPPQR
Trigger: TCGCTGTGGGGGTGAACACCAACCCCAGCAAGGCTG...TTGAGAAATGTTCGTGAGATCAGAAGTCAAAGGTGGGTCTGTCCCACTCACGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419717.3
ENST00000545940.6
CDS-3UTR CCA 90 bp AGTGAATTACAACCTGGAGGGAAAATCCACCCTACTCTGCCCTGCCTAGGCCATGGCGGCGCCGGTAATTaGCAAACCAGTTGTACACCT +
Preference number: 4 (lower is better)
Translates to: SELQPGGKIHPTLPCLGHGGAGN*QTSCTP
Trigger: AGGTGTACAACTGGTTTGCCAATTACCGGCGCCGCC...ATGGCCTAGGCAGGGCAGAGTAGGGTGGATTTTCCCTCCAGGTTGTAATTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR CCA 90 bp CATAGACACAGTGAATTACAACCTGGAGGGAAAATCCACCCTACTCTGCCCTGCTCCAATTGCACGCTCTaGGGATGGCCGCTGACATCC +
Preference number: 4 (lower is better)
Translates to: HRHSELQPGGKIHPTLPCSNCTL*GWPLTS
Trigger: GGATGTCAGCGGCCATCCCCAGAGCGTGCAATTGGA...GCAGGGCAGAGTAGGGTGGATTTTCCCTCCAGGTTGTAATTCACTGTGTCTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419717.3
CDS-3UTR CCA 90 bp AGTGAATTACAACCTGGAGGGAAAATCCACCCTACTCTGCCCTGCCTAGGCCATTTCAGGAGCTTGCAGTaGGGGCTGTGTCACCAGGAA +
Preference number: 4 (lower is better)
Translates to: SELQPGGKIHPTLPCLGHFRSLQ*GLCHQE
Trigger: TTCCTGGTGACACAGCCCCCACTGCAAGCTCCTGAA...ATGGCCTAGGCAGGGCAGAGTAGGGTGGATTTTCCCTCCAGGTTGTAATTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR CCA 90 bp CCCTGCCTAGGCCATTCGCAGACAGGTTTGCCTCCCAGTACTCAAGGGAGAAGCACTCAGTTAACTTGGTaGAAAAGTCTGGCTGTGTGC +
Preference number: 4 (lower is better)
Translates to: PCLGHSQTGLPPSTQGRSTQLTW*KSLAVC
Trigger: GCACACAGCCAGACTTTTCCACCAAGTTAACTGAGT...GCTTCTCCCTTGAGTACTGGGAGGCAAACCTGTCTGCGAATGGCCTAGGCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR TCA 90 bp ATTACAACCTGGAGGGAAAATCCACCCTACTCTGCCCTGCCTAGGCCATTCGCATGTAACTCCTTGTGTTaGCCAGGCAGACCATCCACA +
Preference number: 4 (lower is better)
Translates to: ITTWRENPPYSALPRPFACNSLC*PGRPST
Trigger: TGTGGATGGTCTGCCTGGTCAACACAAGGAGTTACA...TGCGAATGGCCTAGGCAGGGCAGAGTAGGGTGGATTTTCCCTCCAGGTTGTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR TCA 90 bp TTCGCAGACAGGTTTGCCTCCCAGTACTCAAGGGAGAAGCCCCTACACACAGAAGGACAGACCCACCTTTaGCTTCTGATCTCACGAACA +
Preference number: 4 (lower is better)
Translates to: FADRFASQYSREKPLHTEGQTHL*LLISRT
Trigger: TGTTCGTGAGATCAGAAGTCAAAGGTGGGTCTGTCC...TTCTGTGTGTAGGGGCTTCTCCCTTGAGTACTGGGAGGCAAACCTGTCTGCGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR GCA 90 bp TTCGCAGACAGGTTTGCCTCCCAGTACTCAAGGGAGAAGCCCCTACACACAGAACCCACAGCGAAATTGTaGAGCTTCTCACGAACCTCT +
Preference number: 4 (lower is better)
Translates to: FADRFASQYSREKPLHTEPTAKL*SFSRTS
Trigger: AGAGGTTCGTGAGAAGCTGCACAATTTCGCTGTGGG...TTCTGTGTGTAGGGGCTTCTCCCTTGAGTACTGGGAGGCAAACCTGTCTGCGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419717.3
ENST00000545940.6
CDS-3UTR GCA 90 bp CATTTGTGTCATAGACACAGTGAATTACAACCTGGAGGGAAAATCCACCCTACTGGGTTGCCTGAGGGCTaGAGGAGGTCAGGACCCCTC +
Preference number: 4 (lower is better)
Translates to: HLCHRHSELQPGGKIHPTGLPEG*RRSGPL
Trigger: GAGGGGTCCTGACCTCCTGCAGCCCTCAGGCAACCC...AGTAGGGTGGATTTTCCCTCCAGGTTGTAATTCACTGTGTCTATGACACAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR GCA 90 bp TGCGTGAGTGGGACAGACCCACCTTTGACTTCTGATCTCACGAACATTTCTCAATGGCTATCAGAACACTaGACCTGGCTGGAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: CVSGTDPPLTSDLTNISQWLSEH*TWLEGR
Trigger: CCTGCCCTCCAGCCAGGTGCAGTGTTCTGATAGCCA...TTGAGAAATGTTCGTGAGATCAGAAGTCAAAGGTGGGTCTGTCCCACTCACGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR CCA 90 bp CATTTGTGTCATAGACACAGTGAATTACAACCTGGAGGGAAAATCCACCCTACTTGCTGCTGCTCCTGCTaGTCCAGGACACGGGCGCAC +
Preference number: 4 (lower is better)
Translates to: HLCHRHSELQPGGKIHPTCCCSC*SRTRAH
Trigger: GTGCGCCCGTGTCCTGGACCAGCAGGAGCAGCAGCA...AGTAGGGTGGATTTTCCCTCCAGGTTGTAATTCACTGTGTCTATGACACAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419717.3
ENST00000545940.6
CDS-3UTR CCA 90 bp CATTTGTGTCATAGACACAGTGAATTACAACCTGGAGGGAAAATCCACCCTACTGGCTGGGGCCAGCTCTaGAGGGCTCTGGGTGAGGAT +
Preference number: 4 (lower is better)
Translates to: HLCHRHSELQPGGKIHPTGWGQL*RALGED
Trigger: ATCCTCACCCAGAGCCCTCCAGAGCTGGCCCCAGCC...AGTAGGGTGGATTTTCCCTCCAGGTTGTAATTCACTGTGTCTATGACACAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR CCA 90 bp TTTGCCTCCCAGTACTCAAGGGAGAAGCCCCTACACACAGAAATCTCAGAACACGCATCACCAGAGGCCTaGCTATCAGAACACTGCACC +
Preference number: 4 (lower is better)
Translates to: FASQYSREKPLHTEISEHASPEA*LSEHCT
Trigger: GGTGCAGTGTTCTGATAGCCAGGCCTCTGGTGATGC...GTGTTCTGAGATTTCTGTGTGTAGGGGCTTCTCCCTTGAGTACTGGGAGGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR TCA 90 bp TGCGTGAGTGGGACAGACCCACCTTTGACTTCTGATCTCACGAACATTTCTCAACACCTGGCAGAGACCTaGCATCCAGTGGCTTTGAGA +
Preference number: 4 (lower is better)
Translates to: CVSGTDPPLTSDLTNISQHLAET*HPVALR
Trigger: TCTCAAAGCCACTGGATGTCAGGTCTCTGCCAGGTG...TTGAGAAATGTTCGTGAGATCAGAAGTCAAAGGTGGGTCTGTCCCACTCACGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000545940.6
ENST00000673940.1
CDS-3UTR GCA 90 bp AGTGAATTACAACCTGGAGGGAAAATCCACCCTACTCTGCCCTGCCTAGGCCATATTCGCAGACAGGTTTaGCTCCCAGTACTCAAGGGA +
Preference number: 4 (lower is better)
Translates to: SELQPGGKIHPTLPCLGHIRRQV*LPVLKG
Trigger: TCCCTTGAGTACTGGGAGGCAAACCTGTCTGCGAAT...ATGGCCTAGGCAGGGCAGAGTAGGGTGGATTTTCCCTCCAGGTTGTAATTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR GCA 90 bp CATAGACACAGTGAATTACAACCTGGAGGGAAAATCCACCCTACTCTGCCCTGCCTTGGAGGACGCCAGTaGAAGAGACATCAGCCAAGA +
Preference number: 4 (lower is better)
Translates to: HRHSELQPGGKIHPTLPCLGGRQ*KRHQPR
Trigger: TCTTGGCTGATGTCTCTTGCACTGGCGTCCTCCAAG...GCAGGGCAGAGTAGGGTGGATTTTCCCTCCAGGTTGTAATTCACTGTGTCTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545940.6
ENST00000673940.1
CDS-3UTR CCA 90 bp ATAGACACAGTGAATTACAACCTGGAGGGAAAATCCACCCTACTCTGCCCTGCCACCAAAGGCTGCAGTTaGGCAAGGTCATCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: IDTVNYNLEGKSTLLCPATKGCS*ARSSWK
Trigger: CTTCCAGGATGACCTTGCCCAACTGCAGCCTTTGGT...GGCAGGGCAGAGTAGGGTGGATTTTCCCTCCAGGTTGTAATTCACTGTGTCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419717.3
ENST00000545940.6
CDS-3UTR CCA 90 bp CATAGACACAGTGAATTACAACCTGGAGGGAAAATCCACCCTACTCTGCCCTGCTCTCACGAACCTCTCTaGGGAAGTTCCGGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: HRHSELQPGGKIHPTLPCSHEPL*GSSGSS
Trigger: TGAAGAGCCGGAACTTCCCCAGAGAGGTTCGTGAGA...GCAGGGCAGAGTAGGGTGGATTTTCCCTCCAGGTTGTAATTCACTGTGTCTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419717.3
ENST00000545940.6
CDS-3UTR CCA 90 bp TTTGCCTCCCAGTACTCAAGGGAGAAGCCCCTACACACAGAAATCTCAGAACACAGCTCTGGAGGGCTCTaGGTGAGGATGAATTCAGGA +
Preference number: 4 (lower is better)
Translates to: FASQYSREKPLHTEISEHSSGGL*VRMNSG
Trigger: TCCTGAATTCATCCTCACCCAGAGCCCTCCAGAGCT...GTGTTCTGAGATTTCTGTGTGTAGGGGCTTCTCCCTTGAGTACTGGGAGGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR CCA 90 bp GACTACAACATTTGTGTCATAGACACAGTGAATTACAACCTGGAGGGAAAATCCCCTGGCTCAGCTCCATaGCAGACACAGGGCCGGGGA +
Preference number: 4 (lower is better)
Translates to: DYNICVIDTVNYNLEGKSPGSAP*QTQGRG
Trigger: TCCCCGGCCCTGTGTCTGCCATGGAGCTGAGCCAGG...GGATTTTCCCTCCAGGTTGTAATTCACTGTGTCTATGACACAAATGTTGTAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR CCA 90 bp TGCGTGAGTGGGACAGACCCACCTTTGACTTCTGATCTCACGAACATTTCTCAACTCCCCTCTCTAGAATaGCCTTCTCTGCACGAGTGC +
Preference number: 4 (lower is better)
Translates to: CVSGTDPPLTSDLTNISQLPSLE*PSLHEC
Trigger: GCACTCGTGCAGAGAAGGCCATTCTAGAGAGGGGAG...TTGAGAAATGTTCGTGAGATCAGAAGTCAAAGGTGGGTCTGTCCCACTCACGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR GCA 90 bp TACAACATTTGTGTCATAGACACAGTGAATTACAACCTGGAGGGAAAATCCACCGCGTTGTCCAGGAGATaGAGGCGGAGCTGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: YNICVIDTVNYNLEGKSTALSRR*RRSWLS
Trigger: GGACAGCCAGCTCCGCCTGCATCTCCTGGACAACGC...GGTGGATTTTCCCTCCAGGTTGTAATTCACTGTGTCTATGACACAAATGTTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419717.3
ENST00000545940.6
CDS-3UTR GCA 90 bp CTCAAATGCTTTCTCTACTACAGGGAATTGCTAACCAAACTATTCAAACATGGCCTGCAGCGGAACTTCTaGACCGGGGTGAGCGCAGCC +
Preference number: 4 (lower is better)
Translates to: LKCFLYYRELLTKLFKHGLQRNF*TGVSAA
Trigger: GGCTGCGCTCACCCCGGTGCAGAAGTTCCGCTGCAG...GCCATGTTTGAATAGTTTGGTTAGCAATTCCCTGTAGTAGAGAAAGCATTTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419717.3
ENST00000545940.6
CDS-3UTR CCA 90 bp TACAACATTTGTGTCATAGACACAGTGAATTACAACCTGGAGGGAAAATCCACCCTCTGCATCCTGTGCTaGGTCGTGGCCACTCCTCCG +
Preference number: 4 (lower is better)
Translates to: YNICVIDTVNYNLEGKSTLCILC*VVATPP
Trigger: CGGAGGAGTGGCCACGACCCAGCACAGGATGCAGAG...GGTGGATTTTCCCTCCAGGTTGTAATTCACTGTGTCTATGACACAAATGTTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419717.3
ENST00000545940.6
CDS-3UTR CCA 90 bp CTCAAATGCTTTCTCTACTACAGGGAATTGCTAACCAAACTATTCAAACATGGCGGCTGGGGCCAGCTCTaGAGGGCTCTGGGTGAGGAT +
Preference number: 4 (lower is better)
Translates to: LKCFLYYRELLTKLFKHGGWGQL*RALGED
Trigger: ATCCTCACCCAGAGCCCTCCAGAGCTGGCCCCAGCC...GCCATGTTTGAATAGTTTGGTTAGCAATTCCCTGTAGTAGAGAAAGCATTTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR CCA 90 bp ATTACAACCTGGAGGGAAAATCCACCCTACTCTGCCCTGCCTAGGCCATTCGCACTCACTCAGTTAACTTaGTGGAAAAGTCTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: ITTWRENPPYSALPRPFALTQLT*WKSLAV
Trigger: CACAGCCAGACTTTTCCACCAAGTTAACTGAGTGAG...TGCGAATGGCCTAGGCAGGGCAGAGTAGGGTGGATTTTCCCTCCAGGTTGTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR TCA 90 bp AGTGAATTACAACCTGGAGGGAAAATCCACCCTACTCTGCCCTGCCTAGGCCATCCCACCTTTGACTTCTaGTCTCACGAACATTTCTCA +
Preference number: 4 (lower is better)
Translates to: SELQPGGKIHPTLPCLGHPTFDF*SHEHFS
Trigger: TGAGAAATGTTCGTGAGATCAGAAGTCAAAGGTGGG...ATGGCCTAGGCAGGGCAGAGTAGGGTGGATTTTCCCTCCAGGTTGTAATTCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR GCA 90 bp TGCGTGAGTGGGACAGACCCACCTTTGACTTCTGATCTCACGAACATTTCTCAACCCACAGCGAAATTGTaGAGCTTCTCACGAACCTCT +
Preference number: 4 (lower is better)
Translates to: CVSGTDPPLTSDLTNISQPTAKL*SFSRTS
Trigger: AGAGGTTCGTGAGAAGCTGCACAATTTCGCTGTGGG...TTGAGAAATGTTCGTGAGATCAGAAGTCAAAGGTGGGTCTGTCCCACTCACGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419717.3
ENST00000545940.6
CDS-3UTR GCA 90 bp GACTACAACATTTGTGTCATAGACACAGTGAATTACAACCTGGAGGGAAAATCCGCCCGACTGATCCAGTaGTGCGTGAGTGGGACAGAC +
Preference number: 4 (lower is better)
Translates to: DYNICVIDTVNYNLEGKSARLIQ*CVSGTD
Trigger: GTCTGTCCCACTCACGCAGCACTGGATCAGTCGGGC...GGATTTTCCCTCCAGGTTGTAATTCACTGTGTCTATGACACAAATGTTGTAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR CCA 90 bp GACTACAACATTTGTGTCATAGACACAGTGAATTACAACCTGGAGGGAAAATCCGCTGGCTTCATGTGCTaGGGAAGGGCTCTTTGGCGG +
Preference number: 4 (lower is better)
Translates to: DYNICVIDTVNYNLEGKSAGFMC*GRALWR
Trigger: CCGCCAAAGAGCCCTTCCCCAGCACATGAAGCCAGC...GGATTTTCCCTCCAGGTTGTAATTCACTGTGTCTATGACACAAATGTTGTAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR CCA 90 bp TACAACATTTGTGTCATAGACACAGTGAATTACAACCTGGAGGGAAAATCCACCGCTGGCTTCATGTGCTaGGGAAGGGCTCTTTGGCGG +
Preference number: 4 (lower is better)
Translates to: YNICVIDTVNYNLEGKSTAGFMC*GRALWR
Trigger: CCGCCAAAGAGCCCTTCCCCAGCACATGAAGCCAGC...GGTGGATTTTCCCTCCAGGTTGTAATTCACTGTGTCTATGACACAAATGTTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR CCA 90 bp TACAACATTTGTGTCATAGACACAGTGAATTACAACCTGGAGGGAAAATCCACCTGTGGCCTGCTGGGCTaGCTTCATGTGCTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: YNICVIDTVNYNLEGKSTCGLLG*LHVLGK
Trigger: CTTCCCCAGCACATGAAGCCAGCCCAGCAGGCCACA...GGTGGATTTTCCCTCCAGGTTGTAATTCACTGTGTCTATGACACAAATGTTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR CCA 90 bp TTAATTGACTACAACATTTGTGTCATAGACACAGTGAATTACAACCTGGAGGGAGAAGGCAGATGGGGCTaGGGCCAGCTCTGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: LIDYNICVIDTVNYNLEGEGRWG*GQLWRA
Trigger: AGCCCTCCAGAGCTGGCCCCAGCCCCATCTGCCTTC...TCCCTCCAGGTTGTAATTCACTGTGTCTATGACACAAATGTTGTAGTCAATTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR CCA 90 bp AGTGAATTACAACCTGGAGGGAAAATCCACCCTACTCTGCCCTGCCTAGGCCATACTCAGTTAACTTGGTaGAAAAGTCTGGCTGTGTGC +
Preference number: 4 (lower is better)
Translates to: SELQPGGKIHPTLPCLGHTQLTW*KSLAVC
Trigger: GCACACAGCCAGACTTTTCCACCAAGTTAACTGAGT...ATGGCCTAGGCAGGGCAGAGTAGGGTGGATTTTCCCTCCAGGTTGTAATTCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR GCA 90 bp GACTACAACATTTGTGTCATAGACACAGTGAATTACAACCTGGAGGGAAAATCCAAGCTCTGCATCCTGTaGTGGGTCGTGGCCACTCCT +
Preference number: 4 (lower is better)
Translates to: DYNICVIDTVNYNLEGKSKLCIL*WVVATP
Trigger: AGGAGTGGCCACGACCCAGCACAGGATGCAGAGCTT...GGATTTTCCCTCCAGGTTGTAATTCACTGTGTCTATGACACAAATGTTGTAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419717.3
ENST00000545940.6
CDS-3UTR GCA 90 bp CTCAAATGCTTTCTCTACTACAGGGAATTGCTAACCAAACTATTCAAACATGGCAGTCAACACGGGGGTTaGCTGAGGGCTGCAGGAGGT +
Preference number: 4 (lower is better)
Translates to: LKCFLYYRELLTKLFKHGSQHGG*LRAAGG
Trigger: ACCTCCTGCAGCCCTCAGGCAACCCCCGTGTTGACT...GCCATGTTTGAATAGTTTGGTTAGCAATTCCCTGTAGTAGAGAAAGCATTTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR GCA 90 bp CTCAAATGCTTTCTCTACTACAGGGAATTGCTAACCAAACTATTCAAACATGGCGTGTCACCAGGAAGCTaGCCACCCGTAGCTCTGTCC +
Preference number: 4 (lower is better)
Translates to: LKCFLYYRELLTKLFKHGVSPGS*PPVALS
Trigger: GGACAGAGCTACGGGTGGGCAGCTTCCTGGTGACAC...GCCATGTTTGAATAGTTTGGTTAGCAATTCCCTGTAGTAGAGAAAGCATTTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR CCA 90 bp TTAATTGACTACAACATTTGTGTCATAGACACAGTGAATTACAACCTGGAGGGAAGCTGCACTAACTCCTaGCTGCCTCCCGGCACCTGG +
Preference number: 4 (lower is better)
Translates to: LIDYNICVIDTVNYNLEGSCTNS*LPPGTW
Trigger: CCAGGTGCCGGGAGGCAGCCAGGAGTTAGTGCAGCT...TCCCTCCAGGTTGTAATTCACTGTGTCTATGACACAAATGTTGTAGTCAATTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419717.3
ENST00000545940.6
CDS-3UTR CCA 90 bp CTCAAATGCTTTCTCTACTACAGGGAATTGCTAACCAAACTATTCAAACATGGCCAGGGTCTTCAGCTGTaGCCTGCTGGGCTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: LKCFLYYRELLTKLFKHGQGLQL*PAGLAS
Trigger: TGAAGCCAGCCCAGCAGGCCACAGCTGAAGACCCTG...GCCATGTTTGAATAGTTTGGTTAGCAATTCCCTGTAGTAGAGAAAGCATTTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR CCA 90 bp TTAATTGACTACAACATTTGTGTCATAGACACAGTGAATTACAACCTGGAGGGAAGGGTGGCAGGATCATaGCCAGGCCCCTCCTGGTAC +
Preference number: 4 (lower is better)
Translates to: LIDYNICVIDTVNYNLEGRVAGS*PGPSWY
Trigger: GTACCAGGAGGGGCCTGGCCATGATCCTGCCACCCT...TCCCTCCAGGTTGTAATTCACTGTGTCTATGACACAAATGTTGTAGTCAATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545940.6
ENST00000673940.1
CDS-3UTR TCA 90 bp GACTACAACATTTGTGTCATAGACACAGTGAATTACAACCTGGAGGGAAAATCCCACCTGGCAGAGACCTaGCATCCAGTGGCTTTGAGA +
Preference number: 4 (lower is better)
Translates to: DYNICVIDTVNYNLEGKSHLAET*HPVALR
Trigger: TCTCAAAGCCACTGGATGTCAGGTCTCTGCCAGGTG...GGATTTTCCCTCCAGGTTGTAATTCACTGTGTCTATGACACAAATGTTGTAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545940.6
ENST00000673940.1
CDS-3UTR GCA 90 bp CATTTGTGTCATAGACACAGTGAATTACAACCTGGAGGGAAAATCCACCCTACTATGAATTCAGGAGCTTaGAGTGGGGGCTGTGTCACC +
Preference number: 4 (lower is better)
Translates to: HLCHRHSELQPGGKIHPTMNSGA*SGGCVT
Trigger: GGTGACACAGCCCCCACTGCAAGCTCCTGAATTCAT...AGTAGGGTGGATTTTCCCTCCAGGTTGTAATTCACTGTGTCTATGACACAAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR GCA 90 bp TTCGCAGACAGGTTTGCCTCCCAGTACTCAAGGGAGAAGCCCCTACACACAGAACGAACATTTCTCAAATaGTTTCTCTACTACAGGGAA +
Preference number: 4 (lower is better)
Translates to: FADRFASQYSREKPLHTERTFLK*FLYYRE
Trigger: TTCCCTGTAGTAGAGAAAGCATTTGAGAAATGTTCG...TTCTGTGTGTAGGGGCTTCTCCCTTGAGTACTGGGAGGCAAACCTGTCTGCGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR GCA 90 bp ATCCAGTGCTGCGTGAGTGGGACAGACCCACCTTTGACTTCTGATCTCACGAACCGAACATTTCTCAAATaGTTTCTCTACTACAGGGAA +
Preference number: 4 (lower is better)
Translates to: IQCCVSGTDPPLTSDLTNRTFLK*FLYYRE
Trigger: TTCCCTGTAGTAGAGAAAGCATTTGAGAAATGTTCG...GTTCGTGAGATCAGAAGTCAAAGGTGGGTCTGTCCCACTCACGCAGCACTGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR GCA 90 bp TTAATTGACTACAACATTTGTGTCATAGACACAGTGAATTACAACCTGGAGGGAGCCCGACTGATCCAGTaGTGCGTGAGTGGGACAGAC +
Preference number: 4 (lower is better)
Translates to: LIDYNICVIDTVNYNLEGARLIQ*CVSGTD
Trigger: GTCTGTCCCACTCACGCAGCACTGGATCAGTCGGGC...TCCCTCCAGGTTGTAATTCACTGTGTCTATGACACAAATGTTGTAGTCAATTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR CCA 90 bp CATTTGTGTCATAGACACAGTGAATTACAACCTGGAGGGAAAATCCACCCTACTAGCTCTGGAGGGCTCTaGGTGAGGATGAATTCAGGA +
Preference number: 4 (lower is better)
Translates to: HLCHRHSELQPGGKIHPTSSGGL*VRMNSG
Trigger: TCCTGAATTCATCCTCACCCAGAGCCCTCCAGAGCT...AGTAGGGTGGATTTTCCCTCCAGGTTGTAATTCACTGTGTCTATGACACAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR CCA 90 bp TACAACATTTGTGTCATAGACACAGTGAATTACAACCTGGAGGGAAAATCCACCACTCAAGGAGCATCCTaGCTCCCCAGAAGGCATCAC +
Preference number: 4 (lower is better)
Translates to: YNICVIDTVNYNLEGKSTTQGAS*LPRRHH
Trigger: GTGATGCCTTCTGGGGAGCCAGGATGCTCCTTGAGT...GGTGGATTTTCCCTCCAGGTTGTAATTCACTGTGTCTATGACACAAATGTTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR GCA 90 bp TTAATTGACTACAACATTTGTGTCATAGACACAGTGAATTACAACCTGGAGGGATGGGCTGGCTTCATGTaGTGGGGAAGGGCTCTTTGG +
Preference number: 4 (lower is better)
Translates to: LIDYNICVIDTVNYNLEGWAGFM*WGRALW
Trigger: CCAAAGAGCCCTTCCCCAGCACATGAAGCCAGCCCA...TCCCTCCAGGTTGTAATTCACTGTGTCTATGACACAAATGTTGTAGTCAATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR CCA 90 bp GACTACAACATTTGTGTCATAGACACAGTGAATTACAACCTGGAGGGAAAATCCAGCTCTGGAGGGCTCTaGGTGAGGATGAATTCAGGA +
Preference number: 4 (lower is better)
Translates to: DYNICVIDTVNYNLEGKSSSGGL*VRMNSG
Trigger: TCCTGAATTCATCCTCACCCAGAGCCCTCCAGAGCT...GGATTTTCCCTCCAGGTTGTAATTCACTGTGTCTATGACACAAATGTTGTAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR GCA 90 bp CTCAAATGCTTTCTCTACTACAGGGAATTGCTAACCAAACTATTCAAACATGGCATGTCGTTCCAGAGCTaGACTAACTCCTGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: LKCFLYYRELLTKLFKHGMSFQS*TNSWLP
Trigger: AGGCAGCCAGGAGTTAGTGCAGCTCTGGAACGACAT...GCCATGTTTGAATAGTTTGGTTAGCAATTCCCTGTAGTAGAGAAAGCATTTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419717.3
ENST00000545940.6
CDS-3UTR CCA 90 bp TTAATTGACTACAACATTTGTGTCATAGACACAGTGAATTACAACCTGGAGGGAGCATCACCAGAGGCCTaGCTATCAGAACACTGCACC +
Preference number: 4 (lower is better)
Translates to: LIDYNICVIDTVNYNLEGASPEA*LSEHCT
Trigger: GGTGCAGTGTTCTGATAGCCAGGCCTCTGGTGATGC...TCCCTCCAGGTTGTAATTCACTGTGTCTATGACACAAATGTTGTAGTCAATTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR CCA 90 bp TTAATTGACTACAACATTTGTGTCATAGACACAGTGAATTACAACCTGGAGGGAACTCAAGGAGCATCCTaGCTCCCCAGAAGGCATCAC +
Preference number: 4 (lower is better)
Translates to: LIDYNICVIDTVNYNLEGTQGAS*LPRRHH
Trigger: GTGATGCCTTCTGGGGAGCCAGGATGCTCCTTGAGT...TCCCTCCAGGTTGTAATTCACTGTGTCTATGACACAAATGTTGTAGTCAATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR CCA 90 bp TGCGTGAGTGGGACAGACCCACCTTTGACTTCTGATCTCACGAACATTTCTCAAATTCAAACATGGCAGTaGGAAAGAATCTCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: CVSGTDPPLTSDLTNISQIQTWQ*ERISAF
Trigger: AAAAGCAGAGATTCTTTCCCACTGCCATGTTTGAAT...TTGAGAAATGTTCGTGAGATCAGAAGTCAAAGGTGGGTCTGTCCCACTCACGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR TCA 90 bp TTAATTGACTACAACATTTGTGTCATAGACACAGTGAATTACAACCTGGAGGGATGTAACTCCTTGTGTTaGCCAGGCAGACCATCCACA +
Preference number: 4 (lower is better)
Translates to: LIDYNICVIDTVNYNLEGCNSLC*PGRPST
Trigger: TGTGGATGGTCTGCCTGGTCAACACAAGGAGTTACA...TCCCTCCAGGTTGTAATTCACTGTGTCTATGACACAAATGTTGTAGTCAATTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR CCA 90 bp TTAATTGACTACAACATTTGTGTCATAGACACAGTGAATTACAACCTGGAGGGACTCACTCAGTTAACTTaGTGGAAAAGTCTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: LIDYNICVIDTVNYNLEGLTQLT*WKSLAV
Trigger: CACAGCCAGACTTTTCCACCAAGTTAACTGAGTGAG...TCCCTCCAGGTTGTAATTCACTGTGTCTATGACACAAATGTTGTAGTCAATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS GCA 90 bp CCAGACGGTAGTGGATGTCGTTCCAGAGCTGCACTAACTCCTGGCTaGCTCCCGGCACCTGGCACCCCTCCAGGAGGCGGCAAGCCGCCT +
Preference number: 5 (lower is better)
Translates to: PDGSGCRSRAALTPG*LPAPGTPPGGGKPP
Trigger: AGGCGGCTTGCCGCCTCCTGGAGGGGTGCCAGGTGCCGGGAGGCAGCCAGGAGTTAGTGCAGCTCTGGAACGACATCCACTACCGTCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419717.3
ENST00000545940.6
CDS GCA 90 bp AGGTCAGGACCCCTCTCCCTCGCACCAGGGTCTTCAGCTGTGGCCTaGTGGGCTGGCTTCATGTGCTGGGGAAGGGCTCTTTGGCGGCGC +
Preference number: 5 (lower is better)
Translates to: RSGPLSLAPGSSAVA*WAGFMCWGRALWRR
Trigger: GCGCCGCCAAAGAGCCCTTCCCCAGCACATGAAGCCAGCCCAGCAGGCCACAGCTGAAGACCCTGGTGCGAGGGAGAGGGGTCCTGACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS GCA 90 bp GTCCCGGCACAGTCTGCCCGCAAGGGTCACCAGCTCCGCCGGGGGTaGACAGGTGTCCTCATGCTCCTTCAGCAGAGTCAGGAAGCTCTG +
Preference number: 5 (lower is better)
Translates to: VPAQSARKGHQLRRG*TGVLMLLQQSQEAL
Trigger: CAGAGCTTCCTGACTCTGCTGAAGGAGCATGAGGACACCTGTGCACCCCCGGCGGAGCTGGTGACCCTTGCGGGCAGACTGTGCCGGGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000419717.3
ENST00000545940.6
CDS GCA 90 bp AAGGCTGCAGTTGGGCAAGGTCATCCTGGAAGTCCCGGCACAGTCTaGCCGCAAGGGTCACCAGCTCCGCCGGGGGTGCACAGGTGTCCT +
Preference number: 5 (lower is better)
Translates to: KAAVGQGHPGSPGTV*PQGSPAPPGVHRCP
Trigger: AGGACACCTGTGCACCCCCGGCGGAGCTGGTGACCCTTGCGGGCAGACTGTGCCGGGACTTCCAGGATGACCTTGCCCAACTGCAGCCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000419717.3
ENST00000545940.6
CDS-3UTR CAA 90 bp ATGGCCTTCTCTGCACGAGTGCCCCGGAGCCCGACTGATCCAGTGCTGCGTGAGGAGTCAACACGGGGGTaGCCTGAGGGCTGCAGGAGG +
Preference number: 5 (lower is better)
Translates to: MAFSARVPRSPTDPVLREESTRG*PEGCRR
Trigger: CCTCCTGCAGCCCTCAGGCAACCCCCGTGTTGACTC...CTCACGCAGCACTGGATCAGTCGGGCTCCGGGGCACTCGTGCAGAGAAGGCCAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS GCA 90 bp CCCGCAAGGGTCACCAGCTCCGCCGGGGGTGCACAGGTGTCCTCATaGTCCTTCAGCAGAGTCAGGAAGCTCTGCATCCTGTGCTGGGTC +
Preference number: 5 (lower is better)
Translates to: PARVTSSAGGAQVSS*SFSRVRKLCILCWV
Trigger: GACCCAGCACAGGATGCAGAGCTTCCTGACTCTGCTGAAGGAGCATGAGGACACCTGTGCACCCCCGGCGGAGCTGGTGACCCTTGCGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000419717.3
ENST00000545940.6
CDS GCA 90 bp AGGACACGGGCGCACGCCAGGGCCACATCTGCGTTGTCCAGGAGATaGAGGCGGAGCTGGCTGTCCAGAATGGCTGTGACCAAAGGCTGC +
Preference number: 5 (lower is better)
Translates to: RTRAHARATSALSRR*RRSWLSRMAVTKGC
Trigger: GCAGCCTTTGGTCACAGCCATTCTGGACAGCCAGCTCCGCCTGCATCTCCTGGACAACGCAGATGTGGCCCTGGCGTGCGCCCGTGTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419717.3
ENST00000545940.6
CDS GCA 90 bp GGCCTGTCCACAAACCCAGAGTCAACACGGGGGTTGCCTGAGGGCTaGAGGAGGTCAGGACCCCTCTCCCTCGCACCAGGGTCTTCAGCT +
Preference number: 5 (lower is better)
Translates to: GLSTNPESTRGLPEG*RRSGPLSLAPGSSA
Trigger: AGCTGAAGACCCTGGTGCGAGGGAGAGGGGTCCTGACCTCCTGCAGCCCTCAGGCAACCCCCGTGTTGACTCTGGGTTTGTGGACAGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS GCA 90 bp CTGACCACTGAGGCCTGTCCACAAACCCAGAGTCAACACGGGGGTTaGCTGAGGGCTGCAGGAGGTCAGGACCCCTCTCCCTCGCACCAG +
Preference number: 5 (lower is better)
Translates to: LTTEACPQTQSQHGG*LRAAGGQDPSPSHQ
Trigger: CTGGTGCGAGGGAGAGGGGTCCTGACCTCCTGCAGCCCTCAGGCAACCCCCGTGTTGACTCTGGGTTTGTGGACAGGCCTCAGTGGTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS GCA 90 bp TCACCAGGAAGCTGCCCACCCGTAGCTCTGTCCGTCCACTGCTTGTaGCCAGACCCTCCTCCAATTGCACGCTCTGGGGATGGCCGCTGG +
Preference number: 5 (lower is better)
Translates to: SPGSCPPVALSVHCL*PDPPPIARSGDGRW
Trigger: CCAGCGGCCATCCCCAGAGCGTGCAATTGGAGGAGGGTCTGGGCACAAGCAGTGGACGGACAGAGCTACGGGTGGGCAGCTTCCTGGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545940.6
ENST00000673940.1
CDS CCA 90 bp ACCCCTCTCCCTCGCACCAGGGTCTTCAGCTGTGGCCTGCTGGGCTaGCTTCATGTGCTGGGGAAGGGCTCTTTGGCGGCGCCGGTAATT +
Preference number: 5 (lower is better)
Translates to: TPLPRTRVFSCGLLG*LHVLGKGSLAAPVI
Trigger: AATTACCGGCGCCGCCAAAGAGCCCTTCCCCAGCACATGAAGCCAGCCCAGCAGGCCACAGCTGAAGACCCTGGTGCGAGGGAGAGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR CAA 90 bp ATGGCCTTCTCTGCACGAGTGCCCCGGAGCCCGACTGATCCAGTGCTGCGTGAGTGGCTCCCATGGTCCTaGGGTGGTCTGTGGGGACTG +
Preference number: 5 (lower is better)
Translates to: MAFSARVPRSPTDPVLREWLPWS*GGLWGL
Trigger: CAGTCCCCACAGACCACCCAAGGACCATGGGAGCCA...CTCACGCAGCACTGGATCAGTCGGGCTCCGGGGCACTCGTGCAGAGAAGGCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS GCA 90 bp GGTGCACAGGTGTCCTCATGCTCCTTCAGCAGAGTCAGGAAGCTCTaGATCCTGTGCTGGGTCGTGGCCACTCCTCCGGGACCCGCTTCA +
Preference number: 5 (lower is better)
Translates to: GAQVSSCSFSRVRKL*ILCWVVATPPGPAS
Trigger: TGAAGCGGGTCCCGGAGGAGTGGCCACGACCCAGCACAGGATGCAGAGCTTCCTGACTCTGCTGAAGGAGCATGAGGACACCTGTGCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419717.3
ENST00000545940.6
CDS CCA 90 bp AGGCGGAGCTGGCTGTCCAGAATGGCTGTGACCAAAGGCTGCAGTTaGGCAAGGTCATCCTGGAAGTCCCGGCACAGTCTGCCCGCAAGG +
Preference number: 5 (lower is better)
Translates to: RRSWLSRMAVTKGCS*ARSSWKSRHSLPAR
Trigger: CCTTGCGGGCAGACTGTGCCGGGACTTCCAGGATGACCTTGCCCAACTGCAGCCTTTGGTCACAGCCATTCTGGACAGCCAGCTCCGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419717.3
ENST00000545940.6
CDS CCA 90 bp CACGCCAGGGCCACATCTGCGTTGTCCAGGAGATGCAGGCGGAGCTaGCTGTCCAGAATGGCTGTGACCAAAGGCTGCAGTTGGGCAAGG +
Preference number: 5 (lower is better)
Translates to: HARATSALSRRCRRS*LSRMAVTKGCSWAR
Trigger: CCTTGCCCAACTGCAGCCTTTGGTCACAGCCATTCTGGACAGCCAGCTCCGCCTGCATCTCCTGGACAACGCAGATGTGGCCCTGGCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419717.3
ENST00000545940.6
CDS TCA 90 bp CGTTGTCCAGGAGATGCAGGCGGAGCTGGCTGTCCAGAATGGCTGTaGCCAAAGGCTGCAGTTGGGCAAGGTCATCCTGGAAGTCCCGGC +
Preference number: 5 (lower is better)
Translates to: RCPGDAGGAGCPEWL*PKAAVGQGHPGSPG
Trigger: GCCGGGACTTCCAGGATGACCTTGCCCAACTGCAGCCTTTGGTCACAGCCATTCTGGACAGCCAGCTCCGCCTGCATCTCCTGGACAACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419717.3
ENST00000545940.6
CDS GCA 90 bp AGATGCAGGCGGAGCTGGCTGTCCAGAATGGCTGTGACCAAAGGCTaGAGTTGGGCAAGGTCATCCTGGAAGTCCCGGCACAGTCTGCCC +
Preference number: 5 (lower is better)
Translates to: RCRRSWLSRMAVTKG*SWARSSWKSRHSLP
Trigger: GGGCAGACTGTGCCGGGACTTCCAGGATGACCTTGCCCAACTGCAGCCTTTGGTCACAGCCATTCTGGACAGCCAGCTCCGCCTGCATCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419717.3
ENST00000545940.6
CDS-3UTR CAA 90 bp ACCTGGAGGGAAAATCCACCCTACTCTGCCCTGCCTAGGCCATTCGCAGACAGGAGGGCCACATCTGCGTaGTCCAGGAGATGCAGGCGG +
Preference number: 5 (lower is better)
Translates to: TWRENPPYSALPRPFADRRATSA*SRRCRR
Trigger: CCGCCTGCATCTCCTGGACAACGCAGATGTGGCCCT...CCTGTCTGCGAATGGCCTAGGCAGGGCAGAGTAGGGTGGATTTTCCCTCCAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419717.3
ENST00000545940.6
CDS-3UTR CAA 90 bp CCTGGAGGGAAAATCCACCCTACTCTGCCCTGCCTAGGCCATTCGCAGACAGGTTCAGCCTTGCTGGGGTaGGTGTTCACCCCCACAGCG +
Preference number: 5 (lower is better)
Translates to: PGGKIHPTLPCLGHSQTGSALLG*VFTPTA
Trigger: CGCTGTGGGGGTGAACACCAACCCCAGCAAGGCTGA...ACCTGTCTGCGAATGGCCTAGGCAGGGCAGAGTAGGGTGGATTTTCCCTCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000419717.3
ENST00000545940.6
CDS-3UTR CAA 90 bp ACAACCTGGAGGGAAAATCCACCCTACTCTGCCCTGCCTAGGCCATTCGCAGACCTGGGGAAGGGCTCTTaGGCGGCGCCGGTAATTGGC +
Preference number: 5 (lower is better)
Translates to: TTWRENPPYSALPRPFADLGKGS*AAPVIG
Trigger: GCCAATTACCGGCGCCGCCAAAGAGCCCTTCCCCAG...GTCTGCGAATGGCCTAGGCAGGGCAGAGTAGGGTGGATTTTCCCTCCAGGTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR CAA 90 bp CCTGGAGGGAAAATCCACCCTACTCTGCCCTGCCTAGGCCATTCGCAGACAGGTCTGTCCGTCCACTGCTaGTGCCCAGACCCTCCTCCA +
Preference number: 5 (lower is better)
Translates to: PGGKIHPTLPCLGHSQTGLSVHC*CPDPPP
Trigger: TGGAGGAGGGTCTGGGCACAAGCAGTGGACGGACAG...ACCTGTCTGCGAATGGCCTAGGCAGGGCAGAGTAGGGTGGATTTTCCCTCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS GCA 90 bp CGTAGCTCTGTCCGTCCACTGCTTGTGCCCAGACCCTCCTCCAATTaGACGCTCTGGGGATGGCCGCTGACATCCAGTGGCTTTGAGACT +
Preference number: 5 (lower is better)
Translates to: RSSVRPLLVPRPSSN*TLWGWPLTSSGFET
Trigger: AGTCTCAAAGCCACTGGATGTCAGCGGCCATCCCCAGAGCGTGCAATTGGAGGAGGGTCTGGGCACAAGCAGTGGACGGACAGAGCTACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419717.3
CDS-3UTR CAA 90 bp GGCCATTCGCAGACAGGTTTGCCTCCCAGTACTCAAGGGAGAAGCCCCTACACATCAGCCTTGCTGGGGTaGGTGTTCACCCCCACAGCG +
Preference number: 5 (lower is better)
Translates to: GHSQTGLPPSTQGRSPYTSALLG*VFTPTA
Trigger: CGCTGTGGGGGTGAACACCAACCCCAGCAAGGCTGA...TGTGTAGGGGCTTCTCCCTTGAGTACTGGGAGGCAAACCTGTCTGCGAATGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000419717.3
ENST00000545940.6
CDS-3UTR CAA 90 bp AAGTCTGGCTGTGTGCACGGGCAGACGGCAAGGCAGCCAGCAGCAGAACACTCCCATTCGCAGACAGGTTaGCCTCCCAGTACTCAAGGG +
Preference number: 5 (lower is better)
Translates to: KSGCVHGQTARQPAAEHSHSQTG*PPSTQG
Trigger: CCCTTGAGTACTGGGAGGCAAACCTGTCTGCGAATG...GGAGTGTTCTGCTGCTGGCTGCCTTGCCGTCTGCCCGTGCACACAGCCAGACTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS CCA 90 bp CTGGCTTCATGTGCTGGGGAAGGGCTCTTTGGCGGCGCCGGTAATTaGCAAACCAGTTGTACACCTGCTCAGGGGTCAAGCTCGTCTCCA +
Preference number: 5 (lower is better)
Translates to: LASCAGEGLFGGAGN*QTSCTPAQGSSSSP
Trigger: TGGAGACGAGCTTGACCCCTGAGCAGGTGTACAACTGGTTTGCCAATTACCGGCGCCGCCAAAGAGCCCTTCCCCAGCACATGAAGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419717.3
ENST00000545940.6
CDS-3UTR CAA 90 bp ATTACAACCTGGAGGGAAAATCCACCCTACTCTGCCCTGCCTAGGCCATTCGCAGAGTCAACACGGGGGTaGCCTGAGGGCTGCAGGAGG +
Preference number: 5 (lower is better)
Translates to: ITTWRENPPYSALPRPFAESTRG*PEGCRR
Trigger: CCTCCTGCAGCCCTCAGGCAACCCCCGTGTTGACTC...TGCGAATGGCCTAGGCAGGGCAGAGTAGGGTGGATTTTCCCTCCAGGTTGTAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR CAA 90 bp ATTACAACCTGGAGGGAAAATCCACCCTACTCTGCCCTGCCTAGGCCATTCGCACTGTCCGTCCACTGCTaGTGCCCAGACCCTCCTCCA +
Preference number: 5 (lower is better)
Translates to: ITTWRENPPYSALPRPFALSVHC*CPDPPP
Trigger: TGGAGGAGGGTCTGGGCACAAGCAGTGGACGGACAG...TGCGAATGGCCTAGGCAGGGCAGAGTAGGGTGGATTTTCCCTCCAGGTTGTAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR CAA 90 bp CCCTGCCTAGGCCATTCGCAGACAGGTTTGCCTCCCAGTACTCAAGGGAGAAGCCATTCGCAGACAGGTTaGCCTCCCAGTACTCAAGGG +
Preference number: 5 (lower is better)
Translates to: PCLGHSQTGLPPSTQGRSHSQTG*PPSTQG
Trigger: CCCTTGAGTACTGGGAGGCAAACCTGTCTGCGAATG...GCTTCTCCCTTGAGTACTGGGAGGCAAACCTGTCTGCGAATGGCCTAGGCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR CAA 90 bp ACAACCTGGAGGGAAAATCCACCCTACTCTGCCCTGCCTAGGCCATTCGCAGACACCCCCACAGCGAAATaGTGCAGCTTCTCACGAACC +
Preference number: 5 (lower is better)
Translates to: TTWRENPPYSALPRPFADTPTAK*CSFSRT
Trigger: GGTTCGTGAGAAGCTGCACAATTTCGCTGTGGGGGT...GTCTGCGAATGGCCTAGGCAGGGCAGAGTAGGGTGGATTTTCCCTCCAGGTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419717.3
ENST00000545940.6
CDS-3UTR CAA 90 bp TTTGCCTCCCAGTACTCAAGGGAGAAGCCCCTACACACAGAAATCTCAGAACACCTGGGGAAGGGCTCTTaGGCGGCGCCGGTAATTGGC +
Preference number: 5 (lower is better)
Translates to: FASQYSREKPLHTEISEHLGKGS*AAPVIG
Trigger: GCCAATTACCGGCGCCGCCAAAGAGCCCTTCCCCAG...GTGTTCTGAGATTTCTGTGTGTAGGGGCTTCTCCCTTGAGTACTGGGAGGCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR CAA 90 bp CATAGACACAGTGAATTACAACCTGGAGGGAAAATCCACCCTACTCTGCCCTGCCTGGGGAAGGGCTCTTaGGCGGCGCCGGTAATTGGC +
Preference number: 5 (lower is better)
Translates to: HRHSELQPGGKIHPTLPCLGKGS*AAPVIG
Trigger: GCCAATTACCGGCGCCGCCAAAGAGCCCTTCCCCAG...GCAGGGCAGAGTAGGGTGGATTTTCCCTCCAGGTTGTAATTCACTGTGTCTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR CAA 90 bp CATAGACACAGTGAATTACAACCTGGAGGGAAAATCCACCCTACTCTGCCCTGCGAGTCAACACGGGGGTaGCCTGAGGGCTGCAGGAGG +
Preference number: 5 (lower is better)
Translates to: HRHSELQPGGKIHPTLPCESTRG*PEGCRR
Trigger: CCTCCTGCAGCCCTCAGGCAACCCCCGTGTTGACTC...GCAGGGCAGAGTAGGGTGGATTTTCCCTCCAGGTTGTAATTCACTGTGTCTATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR CAA 90 bp AGTGAATTACAACCTGGAGGGAAAATCCACCCTACTCTGCCCTGCCTAGGCCATTGGCTCCCATGGTCCTaGGGTGGTCTGTGGGGACTG +
Preference number: 5 (lower is better)
Translates to: SELQPGGKIHPTLPCLGHWLPWS*GGLWGL
Trigger: CAGTCCCCACAGACCACCCAAGGACCATGGGAGCCA...ATGGCCTAGGCAGGGCAGAGTAGGGTGGATTTTCCCTCCAGGTTGTAATTCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR CAA 90 bp ATAGACACAGTGAATTACAACCTGGAGGGAAAATCCACCCTACTCTGCCCTGCCTGGCTCCCATGGTCCTaGGGTGGTCTGTGGGGACTG +
Preference number: 5 (lower is better)
Translates to: IDTVNYNLEGKSTLLCPAWLPWS*GGLWGL
Trigger: CAGTCCCCACAGACCACCCAAGGACCATGGGAGCCA...GGCAGGGCAGAGTAGGGTGGATTTTCCCTCCAGGTTGTAATTCACTGTGTCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR CAA 90 bp ATTACAACCTGGAGGGAAAATCCACCCTACTCTGCCCTGCCTAGGCCATTCGCAGATGAATTCAGGAGCTaGCAGTGGGGGCTGTGTCAC +
Preference number: 5 (lower is better)
Translates to: ITTWRENPPYSALPRPFADEFRS*QWGLCH
Trigger: GTGACACAGCCCCCACTGCAAGCTCCTGAATTCATC...TGCGAATGGCCTAGGCAGGGCAGAGTAGGGTGGATTTTCCCTCCAGGTTGTAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR CAA 90 bp TTCGCAGACAGGTTTGCCTCCCAGTACTCAAGGGAGAAGCCCCTACACACAGAAGATGAATTCAGGAGCTaGCAGTGGGGGCTGTGTCAC +
Preference number: 5 (lower is better)
Translates to: FADRFASQYSREKPLHTEDEFRS*QWGLCH
Trigger: GTGACACAGCCCCCACTGCAAGCTCCTGAATTCATC...TTCTGTGTGTAGGGGCTTCTCCCTTGAGTACTGGGAGGCAAACCTGTCTGCGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR CAA 90 bp ACCTGGAGGGAAAATCCACCCTACTCTGCCCTGCCTAGGCCATTCGCAGACAGGCCTCACTCAGTTAACTaGGTGGAAAAGTCTGGCTGT +
Preference number: 5 (lower is better)
Translates to: TWRENPPYSALPRPFADRPHSVN*VEKSGC
Trigger: ACAGCCAGACTTTTCCACCAAGTTAACTGAGTGAGG...CCTGTCTGCGAATGGCCTAGGCAGGGCAGAGTAGGGTGGATTTTCCCTCCAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR CAA 90 bp CATAGACACAGTGAATTACAACCTGGAGGGAAAATCCACCCTACTCTGCCCTGCGATGAATTCAGGAGCTaGCAGTGGGGGCTGTGTCAC +
Preference number: 5 (lower is better)
Translates to: HRHSELQPGGKIHPTLPCDEFRS*QWGLCH
Trigger: GTGACACAGCCCCCACTGCAAGCTCCTGAATTCATC...GCAGGGCAGAGTAGGGTGGATTTTCCCTCCAGGTTGTAATTCACTGTGTCTATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR CAA 90 bp CATTTGTGTCATAGACACAGTGAATTACAACCTGGAGGGAAAATCCACCCTACTCTGTCCGTCCACTGCTaGTGCCCAGACCCTCCTCCA +
Preference number: 5 (lower is better)
Translates to: HLCHRHSELQPGGKIHPTLSVHC*CPDPPP
Trigger: TGGAGGAGGGTCTGGGCACAAGCAGTGGACGGACAG...AGTAGGGTGGATTTTCCCTCCAGGTTGTAATTCACTGTGTCTATGACACAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR CAA 90 bp ATCCAGTGCTGCGTGAGTGGGACAGACCCACCTTTGACTTCTGATCTCACGAACCCTCACTCAGTTAACTaGGTGGAAAAGTCTGGCTGT +
Preference number: 5 (lower is better)
Translates to: IQCCVSGTDPPLTSDLTNPHSVN*VEKSGC
Trigger: ACAGCCAGACTTTTCCACCAAGTTAACTGAGTGAGG...GTTCGTGAGATCAGAAGTCAAAGGTGGGTCTGTCCCACTCACGCAGCACTGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR CAA 90 bp GACTACAACATTTGTGTCATAGACACAGTGAATTACAACCTGGAGGGAAAATCCACCCCCACAGCGAAATaGTGCAGCTTCTCACGAACC +
Preference number: 5 (lower is better)
Translates to: DYNICVIDTVNYNLEGKSTPTAK*CSFSRT
Trigger: GGTTCGTGAGAAGCTGCACAATTTCGCTGTGGGGGT...GGATTTTCCCTCCAGGTTGTAATTCACTGTGTCTATGACACAAATGTTGTAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419717.3
ENST00000545940.6
CDS-3UTR CAA 90 bp ATTACAACCTGGAGGGAAAATCCACCCTACTCTGCCCTGCCTAGGCCATTCGCACTCTACTACAGGGAATaGCTAACCAAACTATTCAAA +
Preference number: 5 (lower is better)
Translates to: ITTWRENPPYSALPRPFALYYRE*LTKLFK
Trigger: TTTGAATAGTTTGGTTAGCAATTCCCTGTAGTAGAG...TGCGAATGGCCTAGGCAGGGCAGAGTAGGGTGGATTTTCCCTCCAGGTTGTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR CAA 90 bp GACTACAACATTTGTGTCATAGACACAGTGAATTACAACCTGGAGGGAAAATCCCATTCGCAGACAGGTTaGCCTCCCAGTACTCAAGGG +
Preference number: 5 (lower is better)
Translates to: DYNICVIDTVNYNLEGKSHSQTG*PPSTQG
Trigger: CCCTTGAGTACTGGGAGGCAAACCTGTCTGCGAATG...GGATTTTCCCTCCAGGTTGTAATTCACTGTGTCTATGACACAAATGTTGTAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR CAA 90 bp ATAGACACAGTGAATTACAACCTGGAGGGAAAATCCACCCTACTCTGCCCTGCCCTCTACTACAGGGAATaGCTAACCAAACTATTCAAA +
Preference number: 5 (lower is better)
Translates to: IDTVNYNLEGKSTLLCPALYYRE*LTKLFK
Trigger: TTTGAATAGTTTGGTTAGCAATTCCCTGTAGTAGAG...GGCAGGGCAGAGTAGGGTGGATTTTCCCTCCAGGTTGTAATTCACTGTGTCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR CAA 90 bp TACAACATTTGTGTCATAGACACAGTGAATTACAACCTGGAGGGAAAATCCACCCCTCACTCAGTTAACTaGGTGGAAAAGTCTGGCTGT +
Preference number: 5 (lower is better)
Translates to: YNICVIDTVNYNLEGKSTPHSVN*VEKSGC
Trigger: ACAGCCAGACTTTTCCACCAAGTTAACTGAGTGAGG...GGTGGATTTTCCCTCCAGGTTGTAATTCACTGTGTCTATGACACAAATGTTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS-3UTR CAA 90 bp CATTTGTGTCATAGACACAGTGAATTACAACCTGGAGGGAAAATCCACCCTACTCTCTACTACAGGGAATaGCTAACCAAACTATTCAAA +
Preference number: 5 (lower is better)
Translates to: HLCHRHSELQPGGKIHPTLYYRE*LTKLFK
Trigger: TTTGAATAGTTTGGTTAGCAATTCCCTGTAGTAGAG...AGTAGGGTGGATTTTCCCTCCAGGTTGTAATTCACTGTGTCTATGACACAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS GCA 72 bp CCACTCCTCCGGGACCCGCTTCAGCGCCGGCGCACGTaGTTGGCGCGCACCCGGGGCTGGCGAGGAGGCGCT +
Preference number: 6 (lower is better)
Translates to: PLLRDPLQRRRT*LARTRGWRGGA
Trigger: AGCGCCTCCTCGCCAGCCCCGGGTGCGCGCCAAGCACGTGCGCCGGCGCTGAAGCGGGTCCCGGAGGAGTGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419717.3
ENST00000545940.6
CDS GCA 72 bp ACCTGGCACCCCTCCAGGAGGCGGCAAGCCGCCTGCTaGTGCTCCTGCTGGTCCAGGACACGGGCGCACGCC +
Preference number: 6 (lower is better)
Translates to: TWHPSRRRQAAC*CSCWSRTRAHA
Trigger: GGCGTGCGCCCGTGTCCTGGACCAGCAGGAGCAGCAGCAGGCGGCTTGCCGCCTCCTGGAGGGGTGCCAGGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419717.3
ENST00000545940.6
CDS GCA 72 bp GTTGGGCAAGGTCATCCTGGAAGTCCCGGCACAGTCTaGCCGCAAGGGTCACCAGCTCCGCCGGGGGTGCAC +
Preference number: 6 (lower is better)
Translates to: VGQGHPGSPGTV*PQGSPAPPGVH
Trigger: GTGCACCCCCGGCGGAGCTGGTGACCCTTGCGGGCAGACTGTGCCGGGACTTCCAGGATGACCTTGCCCAAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000419717.3
ENST00000545940.6
CDS GCA 72 bp AGTGGATGTCGTTCCAGAGCTGCACTAACTCCTGGCTaGCTCCCGGCACCTGGCACCCCTCCAGGAGGCGGC +
Preference number: 6 (lower is better)
Translates to: SGCRSRAALTPG*LPAPGTPPGGG
Trigger: GCCGCCTCCTGGAGGGGTGCCAGGTGCCGGGAGGCAGCCAGGAGTTAGTGCAGCTCTGGAACGACATCCACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419717.3
ENST00000545940.6
CDS CAA 72 bp TCCAGGACACGGGCGCACGCCAGGGCCACATCTGCGTaGTCCAGGAGATGCAGGCGGAGCTGGCTGTCCAGA +
Preference number: 6 (lower is better)
Translates to: SRTRAHARATSA*SRRCRRSWLSR
Trigger: TCTGGACAGCCAGCTCCGCCTGCATCTCCTGGACAACGCAGATGTGGCCCTGGCGTGCGCCCGTGTCCTGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419717.3
ENST00000545940.6
CDS GCA 72 bp CAGTCTGCCCGCAAGGGTCACCAGCTCCGCCGGGGGTaGACAGGTGTCCTCATGCTCCTTCAGCAGAGTCAG +
Preference number: 6 (lower is better)
Translates to: QSARKGHQLRRG*TGVLMLLQQSQ
Trigger: CTGACTCTGCTGAAGGAGCATGAGGACACCTGTGCACCCCCGGCGGAGCTGGTGACCCTTGCGGGCAGACTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000419717.3
ENST00000545940.6
CDS GCA 72 bp GAGGCCTGTCCACAAACCCAGAGTCAACACGGGGGTTaGCTGAGGGCTGCAGGAGGTCAGGACCCCTCTCCC +
Preference number: 6 (lower is better)
Translates to: EACPQTQSQHGG*LRAAGGQDPSP
Trigger: GGGAGAGGGGTCCTGACCTCCTGCAGCCCTCAGGCAACCCCCGTGTTGACTCTGGGTTTGTGGACAGGCCTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS CAA 90 bp GTGTCACCAGGAAGCTGCCCACCCGTAGCTCTGTCCGTCCACTGCTaGTGCCCAGACCCTCCTCCAATTGCACGCTCTGGGGATGGCCGC +
Preference number: 6 (lower is better)
Translates to: VSPGSCPPVALSVHC*CPDPPPIARSGDGR
Trigger: GCGGCCATCCCCAGAGCGTGCAATTGGAGGAGGGTCTGGGCACAAGCAGTGGACGGACAGAGCTACGGGTGGGCAGCTTCCTGGTGACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS GCA 72 bp GTCCGTCCACTGCTTGTGCCCAGACCCTCCTCCAATTaGACGCTCTGGGGATGGCCGCTGACATCCAGTGGC +
Preference number: 6 (lower is better)
Translates to: VRPLLVPRPSSN*TLWGWPLTSSG
Trigger: GCCACTGGATGTCAGCGGCCATCCCCAGAGCGTGCAATTGGAGGAGGGTCTGGGCACAAGCAGTGGACGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419717.3
CDS GCA 72 bp CAGGAGCTTGCAGTGGGGGCTGTGTCACCAGGAAGCTaGCCACCCGTAGCTCTGTCCGTCCACTGCTTGTGC +
Preference number: 6 (lower is better)
Translates to: QELAVGAVSPGS*PPVALSVHCLC
Trigger: GCACAAGCAGTGGACGGACAGAGCTACGGGTGGGCAGCTTCCTGGTGACACAGCCCCCACTGCAAGCTCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS CAA 72 bp GGAAGCTGCCCACCCGTAGCTCTGTCCGTCCACTGCTaGTGCCCAGACCCTCCTCCAATTGCACGCTCTGGG +
Preference number: 6 (lower is better)
Translates to: GSCPPVALSVHC*CPDPPPIARSG
Trigger: CCCAGAGCGTGCAATTGGAGGAGGGTCTGGGCACAAGCAGTGGACGGACAGAGCTACGGGTGGGCAGCTTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS GCA 72 bp TGCTCCTTCAGCAGAGTCAGGAAGCTCTGCATCCTGTaGTGGGTCGTGGCCACTCCTCCGGGACCCGCTTCA +
Preference number: 6 (lower is better)
Translates to: CSFSRVRKLCIL*WVVATPPGPAS
Trigger: TGAAGCGGGTCCCGGAGGAGTGGCCACGACCCAGCACAGGATGCAGAGCTTCCTGACTCTGCTGAAGGAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419717.3
ENST00000545940.6
CDS GCA 72 bp GTCACCAGCTCCGCCGGGGGTGCACAGGTGTCCTCATaGTCCTTCAGCAGAGTCAGGAAGCTCTGCATCCTG +
Preference number: 6 (lower is better)
Translates to: VTSSAGGAQVSS*SFSRVRKLCIL
Trigger: CAGGATGCAGAGCTTCCTGACTCTGCTGAAGGAGCATGAGGACACCTGTGCACCCCCGGCGGAGCTGGTGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000419717.3
ENST00000545940.6
CDS GCA 72 bp AGCTGCCCACCCGTAGCTCTGTCCGTCCACTGCTTGTaGCCAGACCCTCCTCCAATTGCACGCTCTGGGGAT +
Preference number: 6 (lower is better)
Translates to: SCPPVALSVHCL*PDPPPIARSGD
Trigger: ATCCCCAGAGCGTGCAATTGGAGGAGGGTCTGGGCACAAGCAGTGGACGGACAGAGCTACGGGTGGGCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS CCA 72 bp AGCATCCTGGCTCCCCAGAAGGCATCACCAGAGGCCTaGCTATCAGAACACTGCACCTGGCTGGAGGGCAGG +
Preference number: 6 (lower is better)
Translates to: SILAPQKASPEA*LSEHCTWLEGR
Trigger: CCTGCCCTCCAGCCAGGTGCAGTGTTCTGATAGCCAGGCCTCTGGTGATGCCTTCTGGGGAGCCAGGATGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419717.3
ENST00000545940.6
ENST00000673940.1
CDS CAA 90 bp AGCTGTGGCCTGCTGGGCTGGCTTCATGTGCTGGGGAAGGGCTCTTaGGCGGCGCCGGTAATTGGCAAACCAGTTGTACACCTGCTCAGG +
Preference number: 6 (lower is better)
Translates to: SCGLLGWLHVLGKGS*AAPVIGKPVVHLLR
Trigger: CCTGAGCAGGTGTACAACTGGTTTGCCAATTACCGGCGCCGCCAAAGAGCCCTTCCCCAGCACATGAAGCCAGCCCAGCAGGCCACAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419717.3
ENST00000545940.6
CDS GCA 72 bp CGGAGCTGGCTGTCCAGAATGGCTGTGACCAAAGGCTaGAGTTGGGCAAGGTCATCCTGGAAGTCCCGGCAC +
Preference number: 6 (lower is better)
Translates to: RSWLSRMAVTKG*SWARSSWKSRH
Trigger: GTGCCGGGACTTCCAGGATGACCTTGCCCAACTGCAGCCTTTGGTCACAGCCATTCTGGACAGCCAGCTCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419717.3
ENST00000545940.6
CDS TCA 72 bp GGAGATGCAGGCGGAGCTGGCTGTCCAGAATGGCTGTaGCCAAAGGCTGCAGTTGGGCAAGGTCATCCTGGA +
Preference number: 6 (lower is better)
Translates to: GDAGGAGCPEWL*PKAAVGQGHPG
Trigger: TCCAGGATGACCTTGCCCAACTGCAGCCTTTGGTCACAGCCATTCTGGACAGCCAGCTCCGCCTGCATCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419717.3
ENST00000545940.6
CDS CCA 72 bp GCCACATCTGCGTTGTCCAGGAGATGCAGGCGGAGCTaGCTGTCCAGAATGGCTGTGACCAAAGGCTGCAGT +
Preference number: 6 (lower is better)
Translates to: ATSALSRRCRRS*LSRMAVTKGCS
Trigger: ACTGCAGCCTTTGGTCACAGCCATTCTGGACAGCCAGCTCCGCCTGCATCTCCTGGACAACGCAGATGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419717.3
ENST00000545940.6
CDS CCA 72 bp TGTGCTGGGGAAGGGCTCTTTGGCGGCGCCGGTAATTaGCAAACCAGTTGTACACCTGCTCAGGGGTCAAGC +
Preference number: 6 (lower is better)
Translates to: CAGEGLFGGAGN*QTSCTPAQGSS
Trigger: GCTTGACCCCTGAGCAGGTGTACAACTGGTTTGCCAATTACCGGCGCCGCCAAAGAGCCCTTCCCCAGCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419717.3
ENST00000545940.6
CDS CCA 72 bp TGGCTGTCCAGAATGGCTGTGACCAAAGGCTGCAGTTaGGCAAGGTCATCCTGGAAGTCCCGGCACAGTCTG +
Preference number: 6 (lower is better)
Translates to: WLSRMAVTKGCS*ARSSWKSRHSL
Trigger: CAGACTGTGCCGGGACTTCCAGGATGACCTTGCCCAACTGCAGCCTTTGGTCACAGCCATTCTGGACAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419717.3
ENST00000545940.6