RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ANGPTL8 (Homo sapiens)

Ensembl gene IDs: ENSG00000130173

Ensembl transcript IDs: ENST00000252453.12, ENST00000587543.1, ENST00000591200.5, ENST00000616433.4

Found 168 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR CCA 90 bp CTTTGTCCCCGCCTGCGTCTGTCTCTGCTCTGTGCTCAGAAGTGGGGCCCGGCGGGGCCTCACGGGGCGTaGAAGTGTTCCTTGCAGCAT +
Preference number: 2 (lower is better)
Translates to: LCPRLRLSLLCAQKWGPAGPHGA*KCSLQH
Trigger: ATGCTGCAAGGAACACTTCCACGCCCCGTGAGGCCC...CGCCGGGCCCCACTTCTGAGCACAGAGCAGAGACAGACGCAGGCGGGGACAAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000252453.12
ENST00000587543.1
ENST00000616433.4
3UTR-3UTR GCA 90 bp TCCCCGCCTGCGTCTGTCTCTGCTCTGTGCTCAGAAGTGGGGCCCGGCGCCCTGCGTGGAAGTGTTCCTTaGAGCATGATTGGTCCTCAG +
Preference number: 2 (lower is better)
Translates to: SPPASVSALCSEVGPGALRGSVP*SMIGPQ
Trigger: CTGAGGACCAATCATGCTGCAAGGAACACTTCCACG...CAGGGCGCCGGGCCCCACTTCTGAGCACAGAGCAGAGACAGACGCAGGCGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252453.12
ENST00000587543.1
ENST00000616433.4
3UTR-3UTR CCA 90 bp TCCCCGCCTGCGTCTGTCTCTGCTCTGTGCTCAGAAGTGGGGCCCGGCGCCCTGTCCTTGCAGCATGATTaGTCCTCAGTTCCATCCAGG +
Preference number: 2 (lower is better)
Translates to: SPPASVSALCSEVGPGALSLQHD*SSVPSR
Trigger: CCTGGATGGAACTGAGGACCAATCATGCTGCAAGGA...CAGGGCGCCGGGCCCCACTTCTGAGCACAGAGCAGAGACAGACGCAGGCGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252453.12
ENST00000587543.1
ENST00000616433.4
3UTR-3UTR TCA 90 bp TTGTCCCCGCCTGCGTCTGTCTCTGCTCTGTGCTCAGAAGTGGGGCCCGGCGCCGTGTTCCTTGCAGCATaGTTGGTCCTCAGTTCCATC +
Preference number: 2 (lower is better)
Translates to: LSPPASVSALCSEVGPGAVFLAA*LVLSSI
Trigger: GATGGAACTGAGGACCAATCATGCTGCAAGGAACAC...GGCGCCGGGCCCCACTTCTGAGCACAGAGCAGAGACAGACGCAGGCGGGGACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252453.12
ENST00000587543.1
ENST00000616433.4
3UTR-3UTR TCA 90 bp CTCTGTGCTCAGAAGTGGGGCCCGGCGCCCTGGCTGATCCCAGTGAACAGGCAGGTGTTCCTTGCAGCATaGTTGGTCCTCAGTTCCATC +
Preference number: 2 (lower is better)
Translates to: LCAQKWGPAPWLIPVNRQVFLAA*LVLSSI
Trigger: GATGGAACTGAGGACCAATCATGCTGCAAGGAACAC...CTGCCTGTTCACTGGGATCAGCCAGGGCGCCGGGCCCCACTTCTGAGCACAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252453.12
ENST00000587543.1
ENST00000616433.4
3UTR-3UTR CCA 90 bp CTCTGTGCTCAGAAGTGGGGCCCGGCGCCCTGGCTGATCCCAGTGAACAGGCAGTCCTTGCAGCATGATTaGTCCTCAGTTCCATCCAGG +
Preference number: 2 (lower is better)
Translates to: LCAQKWGPAPWLIPVNRQSLQHD*SSVPSR
Trigger: CCTGGATGGAACTGAGGACCAATCATGCTGCAAGGA...CTGCCTGTTCACTGGGATCAGCCAGGGCGCCGGGCCCCACTTCTGAGCACAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252453.12
ENST00000587543.1
ENST00000616433.4
3UTR-3UTR GCA 90 bp CCAATGGGGCTACATCCTCTGCCTTTGTCCCCGCCTGCGTCTGTCTCTGCTCTGCGTGGAAGTGTTCCTTaGAGCATGATTGGTCCTCAG +
Preference number: 2 (lower is better)
Translates to: PMGLHPLPLSPPASVSALRGSVP*SMIGPQ
Trigger: CTGAGGACCAATCATGCTGCAAGGAACACTTCCACG...CAGAGCAGAGACAGACGCAGGCGGGGACAAAGGCAGAGGATGTAGCCCCATTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252453.12
ENST00000587543.1
ENST00000616433.4
3UTR GCA 72 bp ACATCCTCTGCCTTTGTCCCCGCCTGCGTCTGTCTCTaGTCTGTGCTCAGAAGTGGGGCCCGGCGCCCTGGC +
Preference number: 3 (lower is better)
Translates to: TSSAFVPACVCL*SVLRSGARRPG
Trigger: GCCAGGGCGCCGGGCCCCACTTCTGAGCACAGAGCAGAGACAGACGCAGGCGGGGACAAAGGCAGAGGATGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252453.12
ENST00000587543.1
ENST00000616433.4
3UTR-3UTR CAA 90 bp GTCCCCGCCTGCGTCTGTCTCTGCTCTGTGCTCAGAAGTGGGGCCCGGCGCCCTGCGTGGAAGTGTTCCTaGCAGCATGATTGGTCCTCA +
Preference number: 3 (lower is better)
Translates to: VPACVCLCSVLRSGARRPAWKCS*QHDWSS
Trigger: TGAGGACCAATCATGCTGCAAGGAACACTTCCACGC...AGGGCGCCGGGCCCCACTTCTGAGCACAGAGCAGAGACAGACGCAGGCGGGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252453.12
ENST00000587543.1
ENST00000616433.4
3UTR-3UTR CAA 90 bp TTTGTCCCCGCCTGCGTCTGTCTCTGCTCTGTGCTCAGAAGTGGGGCCCGGCGCGCGTGGAAGTGTTCCTaGCAGCATGATTGGTCCTCA +
Preference number: 3 (lower is better)
Translates to: FVPACVCLCSVLRSGARRAWKCS*QHDWSS
Trigger: TGAGGACCAATCATGCTGCAAGGAACACTTCCACGC...GCGCCGGGCCCCACTTCTGAGCACAGAGCAGAGACAGACGCAGGCGGGGACAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252453.12
ENST00000587543.1
ENST00000616433.4
3UTR GCA 72 bp CTGCACAGGGGCCTCACGGGGCGTGGAAGTGTTCCTTaGAGCATGATTGGTCCTCAGTTCCATCCAGGCAGA +
Preference number: 3 (lower is better)
Translates to: LHRGLTGRGSVP*SMIGPQFHPGR
Trigger: TCTGCCTGGATGGAACTGAGGACCAATCATGCTGCAAGGAACACTTCCACGCCCCGTGAGGCCCCTGTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252453.12
ENST00000587543.1
ENST00000591200.5
ENST00000616433.4
CDS-3UTR TCA 90 bp TCCCCGCCTGCGTCTGTCTCTGCTCTGTGCTCAGAAGTGGGGCCCGGCGCCCTGGCCCATGGGGGCCGCTaGGGCAGGCCGGGTCACCAT +
Preference number: 4 (lower is better)
Translates to: SPPASVSALCSEVGPGALAHGGR*GRPGHH
Trigger: ATGGTGACCCGGCCTGCCTCAGCGGCCCCCATGGGC...CAGGGCGCCGGGCCCCACTTCTGAGCACAGAGCAGAGACAGACGCAGGCGGGGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000252453.12
ENST00000616433.4
CDS-3UTR CCA 90 bp CCGCCTGCGTCTGTCTCTGCTCTGTGCTCAGAAGTGGGGCCCGGCGCCCTGGCTGTTCTGGGCCGCCCATaGGGGCCGCTGAGGCAGGCC +
Preference number: 4 (lower is better)
Translates to: PPASVSALCSEVGPGALAVLGRP*GPLRQA
Trigger: GGCCTGCCTCAGCGGCCCCCATGGGCGGCCCAGAAC...AGCCAGGGCGCCGGGCCCCACTTCTGAGCACAGAGCAGAGACAGACGCAGGCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252453.12
ENST00000616433.4
CDS-3UTR CCA 90 bp GTCCCCGCCTGCGTCTGTCTCTGCTCTGTGCTCAGAAGTGGGGCCCGGCGCCCTATGCTGTGCCAGTTCTaGGCCGCCCATGGGGGCCGC +
Preference number: 4 (lower is better)
Translates to: VPACVCLCSVLRSGARRPMLCQF*AAHGGR
Trigger: GCGGCCCCCATGGGCGGCCCAGAACTGGCACAGCAT...AGGGCGCCGGGCCCCACTTCTGAGCACAGAGCAGAGACAGACGCAGGCGGGGAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000252453.12
ENST00000616433.4
CDS-3UTR TCA 90 bp GTCCCCGCCTGCGTCTGTCTCTGCTCTGTGCTCAGAAGTGGGGCCCGGCGCCCTGCTGCACGTGGCCTGTaGGGGCCCATAGGATGTGGC +
Preference number: 4 (lower is better)
Translates to: VPACVCLCSVLRSGARRPAARGL*GPIGCG
Trigger: GCCACATCCTATGGGCCCTCACAGGCCACGTGCAGC...AGGGCGCCGGGCCCCACTTCTGAGCACAGAGCAGAGACAGACGCAGGCGGGGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252453.12
ENST00000587543.1
ENST00000616433.4
CDS-3UTR TCA 90 bp CTCTGTGCTCAGAAGTGGGGCCCGGCGCCCTGGCTGATCCCAGTGAACAGGCAGTGCAGCACGGGCGCCTaGGGACCGGCCCCTTCTGTC +
Preference number: 4 (lower is better)
Translates to: LCAQKWGPAPWLIPVNRQCSTGA*GPAPSV
Trigger: GACAGAAGGGGCCGGTCCTCAGGCGCCCGTGCTGCA...CTGCCTGTTCACTGGGATCAGCCAGGGCGCCGGGCCCCACTTCTGAGCACAGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616433.4
CDS-3UTR GCA 90 bp TCCCCGCCTGCGTCTGTCTCTGCTCTGTGCTCAGAAGTGGGGCCCGGCGCCCTGACCATCTCCCGCCTCTaGCGCTGCACGTGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: SPPASVSALCSEVGPGALTISRL*RCTWPV
Trigger: CACAGGCCACGTGCAGCGGCAGAGGCGGGAGATGGT...CAGGGCGCCGGGCCCCACTTCTGAGCACAGAGCAGAGACAGACGCAGGCGGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252453.12
ENST00000587543.1
ENST00000616433.4
CDS-3UTR CCA 90 bp CCGCCTGCGTCTGTCTCTGCTCTGTGCTCAGAAGTGGGGCCCGGCGCCCTGGCTGTCTCCCAGTGTCTGTaGACCAGCCGCCGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: PPASVSALCSEVGPGALAVSQCL*TSRRPA
Trigger: AGCTGGGCGGCGGCTGGTCCACAGACACTGGGAGAC...AGCCAGGGCGCCGGGCCCCACTTCTGAGCACAGAGCAGAGACAGACGCAGGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616433.4
CDS-3UTR GCA 90 bp GTCTCTGCTCTGTGCTCAGAAGTGGGGCCCGGCGCCCTGGCTGATCCCAGTGAATCCCGCCTCTGCCGCTaGACGTGGCCTGTGAGGGCC +
Preference number: 4 (lower is better)
Translates to: VSALCSEVGPGALADPSESRLCR*TWPVRA
Trigger: GGCCCTCACAGGCCACGTGCAGCGGCAGAGGCGGGA...TTCACTGGGATCAGCCAGGGCGCCGGGCCCCACTTCTGAGCACAGAGCAGAGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252453.12
ENST00000587543.1
ENST00000616433.4
CDS-3UTR GCA 90 bp TCCCCGCCTGCGTCTGTCTCTGCTCTGTGCTCAGAAGTGGGGCCCGGCGCCCTGTGTCGCAGCCGATGCTaGTGTGCCACCATCTCCCGC +
Preference number: 4 (lower is better)
Translates to: SPPASVSALCSEVGPGALCRSRC*CATISR
Trigger: GCGGGAGATGGTGGCACAGCAGCATCGGCTGCGACA...CAGGGCGCCGGGCCCCACTTCTGAGCACAGAGCAGAGACAGACGCAGGCGGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252453.12
ENST00000587543.1
ENST00000616433.4
CDS-3UTR GCA 90 bp CTTTGTCCCCGCCTGCGTCTGTCTCTGCTCTGTGCTCAGAAGTGGGGCCCGGCGGCCGCCAGGGCTCCGTaGGCAACCTTGCTGTGCGAG +
Preference number: 4 (lower is better)
Translates to: LCPRLRLSLLCAQKWGPAAARAP*ATLLCE
Trigger: CTCGCACAGCAAGGTTGCGCACGGAGCCCTGGCGGC...CGCCGGGCCCCACTTCTGAGCACAGAGCAGAGACAGACGCAGGCGGGGACAAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616433.4
CDS-3UTR CCA 90 bp CTTTGTCCCCGCCTGCGTCTGTCTCTGCTCTGTGCTCAGAAGTGGGGCCCGGCGTGGGGCCCGGCGCCCTaGCTGATCCCAGTGAACAGG +
Preference number: 4 (lower is better)
Translates to: LCPRLRLSLLCAQKWGPAWGPAP*LIPVNR
Trigger: CCTGTTCACTGGGATCAGCCAGGGCGCCGGGCCCCA...CGCCGGGCCCCACTTCTGAGCACAGAGCAGAGACAGACGCAGGCGGGGACAAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252453.12
ENST00000587543.1
ENST00000616433.4
CDS-3UTR CCA 90 bp CTCTGTGCTCAGAAGTGGGGCCCGGCGCCCTGGCTGATCCCAGTGAACAGGCAGCTCTGTGCTCAGAAGTaGGGCCCGGCGCCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: LCAQKWGPAPWLIPVNRQLCAQK*GPAPWL
Trigger: CAGCCAGGGCGCCGGGCCCCACTTCTGAGCACAGAG...CTGCCTGTTCACTGGGATCAGCCAGGGCGCCGGGCCCCACTTCTGAGCACAGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252453.12
ENST00000587543.1
ENST00000616433.4
CDS-3UTR GCA 90 bp TTTGTCCCCGCCTGCGTCTGTCTCTGCTCTGTGCTCAGAAGTGGGGCCCGGCGCAGGGCCTGGCCCAGCTaGAGGGTCCCATGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: FVPACVCLCSVLRSGARRRAWPS*RVPWKS
Trigger: GCTCTTCCATGGGACCCTGCAGCTGGGCCAGGCCCT...GCGCCGGGCCCCACTTCTGAGCACAGAGCAGAGACAGACGCAGGCGGGGACAAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252453.12
ENST00000616433.4
CDS-3UTR GCA 90 bp GTCTCTGCTCTGTGCTCAGAAGTGGGGCCCGGCGCCCTGGCTGATCCCAGTGAACCGAAGTTCCTGGGCTaGATCCCGGCCCCGGCTGAC +
Preference number: 4 (lower is better)
Translates to: VSALCSEVGPGALADPSEPKFLG*IPAPAD
Trigger: GTCAGCCGGGGCCGGGATGCAGCCCAGGAACTTCGG...TTCACTGGGATCAGCCAGGGCGCCGGGCCCCACTTCTGAGCACAGAGCAGAGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252453.12
ENST00000616433.4
CDS-3UTR GCA 90 bp CTCTGTGCTCAGAAGTGGGGCCCGGCGCCCTGGCTGATCCCAGTGAACAGGCAGACCATCTCCCGCCTCTaGCGCTGCACGTGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: LCAQKWGPAPWLIPVNRQTISRL*RCTWPV
Trigger: CACAGGCCACGTGCAGCGGCAGAGGCGGGAGATGGT...CTGCCTGTTCACTGGGATCAGCCAGGGCGCCGGGCCCCACTTCTGAGCACAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252453.12
ENST00000587543.1
ENST00000616433.4
CDS-3UTR GCA 90 bp TCCCCGCCTGCGTCTGTCTCTGCTCTGTGCTCAGAAGTGGGGCCCGGCGCCCTGTCTGTCTCTGCTCTGTaGTCAGAAGTGGGGCCCGGC +
Preference number: 4 (lower is better)
Translates to: SPPASVSALCSEVGPGALSVSAL*SEVGPG
Trigger: GCCGGGCCCCACTTCTGAGCACAGAGCAGAGACAGA...CAGGGCGCCGGGCCCCACTTCTGAGCACAGAGCAGAGACAGACGCAGGCGGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252453.12
ENST00000587543.1
ENST00000616433.4
CDS-3UTR CCA 90 bp GTCTCTGCTCTGTGCTCAGAAGTGGGGCCCGGCGCCCTGGCTGATCCCAGTGAAATGCTGTGCCAGTTCTaGGCCGCCCATGGGGGCCGC +
Preference number: 4 (lower is better)
Translates to: VSALCSEVGPGALADPSEMLCQF*AAHGGR
Trigger: GCGGCCCCCATGGGCGGCCCAGAACTGGCACAGCAT...TTCACTGGGATCAGCCAGGGCGCCGGGCCCCACTTCTGAGCACAGAGCAGAGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252453.12
ENST00000616433.4
CDS-3UTR CCA 90 bp CTGTCTCTGCTCTGTGCTCAGAAGTGGGGCCCGGCGCCCTGGCTGATCCCAGTGACACCGTTGAGGGCCTaGCCCAGCTGCAGGGTCCCA +
Preference number: 4 (lower is better)
Translates to: LSLLCAQKWGPAPWLIPVTPLRA*PSCRVP
Trigger: TGGGACCCTGCAGCTGGGCCAGGCCCTCAACGGTGT...CACTGGGATCAGCCAGGGCGCCGGGCCCCACTTCTGAGCACAGAGCAGAGACAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252453.12
ENST00000616433.4
CDS-3UTR CCA 90 bp GTCTCTGCTCTGTGCTCAGAAGTGGGGCCCGGCGCCCTGGCTGATCCCAGTGAACTTGCCCGAAGTTCCTaGGCTGCATCCCGGCCCCGG +
Preference number: 4 (lower is better)
Translates to: VSALCSEVGPGALADPSELARSS*AASRPR
Trigger: CCGGGGCCGGGATGCAGCCCAGGAACTTCGGGCAAG...TTCACTGGGATCAGCCAGGGCGCCGGGCCCCACTTCTGAGCACAGAGCAGAGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252453.12
ENST00000616433.4
CDS-3UTR CCA 90 bp TTTGTCCCCGCCTGCGTCTGTCTCTGCTCTGTGCTCAGAAGTGGGGCCCGGCGCCTCTGCCGCTGCACGTaGCCTGTGAGGGCCCATAGG +
Preference number: 4 (lower is better)
Translates to: FVPACVCLCSVLRSGARRLCRCT*PVRAHR
Trigger: CCTATGGGCCCTCACAGGCCACGTGCAGCGGCAGAG...GCGCCGGGCCCCACTTCTGAGCACAGAGCAGAGACAGACGCAGGCGGGGACAAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252453.12
ENST00000587543.1
ENST00000616433.4
CDS-3UTR CCA 90 bp CTGCTCTGTGCTCAGAAGTGGGGCCCGGCGCCCTGGCTGATCCCAGTGAACAGGCTCTGCCGCTGCACGTaGCCTGTGAGGGCCCATAGG +
Preference number: 4 (lower is better)
Translates to: LLCAQKWGPAPWLIPVNRLCRCT*PVRAHR
Trigger: CCTATGGGCCCTCACAGGCCACGTGCAGCGGCAGAG...CCTGTTCACTGGGATCAGCCAGGGCGCCGGGCCCCACTTCTGAGCACAGAGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252453.12
ENST00000587543.1
ENST00000616433.4
CDS-3UTR CCA 90 bp CTCTGTGCTCAGAAGTGGGGCCCGGCGCCCTGGCTGATCCCAGTGAACAGGCAGCTCTGCCGCTGCACGTaGCCTGTGAGGGCCCATAGG +
Preference number: 4 (lower is better)
Translates to: LCAQKWGPAPWLIPVNRQLCRCT*PVRAHR
Trigger: CCTATGGGCCCTCACAGGCCACGTGCAGCGGCAGAG...CTGCCTGTTCACTGGGATCAGCCAGGGCGCCGGGCCCCACTTCTGAGCACAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252453.12
ENST00000587543.1
ENST00000616433.4
CDS-3UTR CCA 90 bp CCGCCTGCGTCTGTCTCTGCTCTGTGCTCAGAAGTGGGGCCCGGCGCCCTGGCTGGGAGCGCCGCTGTGTaGAGTCTCTCCTGGATCTGT +
Preference number: 4 (lower is better)
Translates to: PPASVSALCSEVGPGALAGSAAV*SLSWIC
Trigger: ACAGATCCAGGAGAGACTCCACACAGCGGCGCTCCC...AGCCAGGGCGCCGGGCCCCACTTCTGAGCACAGAGCAGAGACAGACGCAGGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252453.12
ENST00000587543.1
ENST00000616433.4
CDS-3UTR CCA 90 bp TCCCCGCCTGCGTCTGTCTCTGCTCTGTGCTCAGAAGTGGGGCCCGGCGCCCTGGGGCCTCACGGGGCGTaGAAGTGTTCCTTGCAGCAT +
Preference number: 4 (lower is better)
Translates to: SPPASVSALCSEVGPGALGPHGA*KCSLQH
Trigger: ATGCTGCAAGGAACACTTCCACGCCCCGTGAGGCCC...CAGGGCGCCGGGCCCCACTTCTGAGCACAGAGCAGAGACAGACGCAGGCGGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000252453.12
ENST00000587543.1
ENST00000616433.4
CDS-3UTR TCA 90 bp GCACAGGGGCCTCACGGGGCGTGGAAGTGTTCCTTGCAGCATGATTGGTCCTCATGCAGCACGGGCGCCTaGGGACCGGCCCCTTCTGTC +
Preference number: 4 (lower is better)
Translates to: AQGPHGAWKCSLQHDWSSCSTGA*GPAPSV
Trigger: GACAGAAGGGGCCGGTCCTCAGGCGCCCGTGCTGCA...TGAGGACCAATCATGCTGCAAGGAACACTTCCACGCCCCGTGAGGCCCCTGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000591200.5
ENST00000616433.4
CDS-3UTR GCA 90 bp CGTCTGTCTCTGCTCTGTGCTCAGAAGTGGGGCCCGGCGCCCTGGCTGATCCCACAGCCGATGCTGCTGTaGCACCATCTCCCGCCTCTG +
Preference number: 4 (lower is better)
Translates to: RLSLLCAQKWGPAPWLIPQPMLL*HHLPPL
Trigger: CAGAGGCGGGAGATGGTGGCACAGCAGCATCGGCTG...TGGGATCAGCCAGGGCGCCGGGCCCCACTTCTGAGCACAGAGCAGAGACAGACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252453.12
ENST00000587543.1
ENST00000616433.4
CDS-3UTR GCA 90 bp TTTGTCCCCGCCTGCGTCTGTCTCTGCTCTGTGCTCAGAAGTGGGGCCCGGCGCCAGCCGATGCTGCTGTaGCACCATCTCCCGCCTCTG +
Preference number: 4 (lower is better)
Translates to: FVPACVCLCSVLRSGARRQPMLL*HHLPPL
Trigger: CAGAGGCGGGAGATGGTGGCACAGCAGCATCGGCTG...GCGCCGGGCCCCACTTCTGAGCACAGAGCAGAGACAGACGCAGGCGGGGACAAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252453.12
ENST00000587543.1
ENST00000616433.4
CDS-3UTR GCA 90 bp CTTTGTCCCCGCCTGCGTCTGTCTCTGCTCTGTGCTCAGAAGTGGGGCCCGGCGTGTCGCAGCCGATGCTaGTGTGCCACCATCTCCCGC +
Preference number: 4 (lower is better)
Translates to: LCPRLRLSLLCAQKWGPACRSRC*CATISR
Trigger: GCGGGAGATGGTGGCACAGCAGCATCGGCTGCGACA...CGCCGGGCCCCACTTCTGAGCACAGAGCAGAGACAGACGCAGGCGGGGACAAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252453.12
ENST00000587543.1
ENST00000616433.4
CDS-3UTR GCA 90 bp GTCCCCGCCTGCGTCTGTCTCTGCTCTGTGCTCAGAAGTGGGGCCCGGCGCCCTATCTGTCGCAGCCGATaGTGCTGTGCCACCATCTCC +
Preference number: 4 (lower is better)
Translates to: VPACVCLCSVLRSGARRPICRSR*CCATIS
Trigger: GGAGATGGTGGCACAGCAGCATCGGCTGCGACAGAT...AGGGCGCCGGGCCCCACTTCTGAGCACAGAGCAGAGACAGACGCAGGCGGGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252453.12
ENST00000587543.1
ENST00000616433.4
CDS-3UTR CCA 90 bp CGTCTGTCTCTGCTCTGTGCTCAGAAGTGGGGCCCGGCGCCCTGGCTGATCCCACAGGCAGATTCAGGCTaGGAGCGCCGCTGTGTGGAG +
Preference number: 4 (lower is better)
Translates to: RLSLLCAQKWGPAPWLIPQADSG*ERRCVE
Trigger: CTCCACACAGCGGCGCTCCCAGCCTGAATCTGCCTG...TGGGATCAGCCAGGGCGCCGGGCCCCACTTCTGAGCACAGAGCAGAGACAGACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252453.12
ENST00000587543.1
ENST00000616433.4
CDS-3UTR TCA 90 bp CAGGGGCCTCACGGGGCGTGGAAGTGTTCCTTGCAGCATGATTGGTCCTCAGTTCATCCCGGCCCCGGCTaGCCTCCTGCCCCAGGAGTT +
Preference number: 4 (lower is better)
Translates to: QGPHGAWKCSLQHDWSSVHPGPG*PPAPGV
Trigger: AACTCCTGGGGCAGGAGGTCAGCCGGGGCCGGGATG...AACTGAGGACCAATCATGCTGCAAGGAACACTTCCACGCCCCGTGAGGCCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000252453.12
ENST00000616433.4
CDS-3UTR GCA 90 bp CTGCTCTGTGCTCAGAAGTGGGGCCCGGCGCCCTGGCTGATCCCAGTGAACAGGAGGGTCAGCTCCTCATaGTGTGCCAGTTCTGGGCCG +
Preference number: 4 (lower is better)
Translates to: LLCAQKWGPAPWLIPVNRRVSSS*CASSGP
Trigger: CGGCCCAGAACTGGCACAGCATGAGGAGCTGACCCT...CCTGTTCACTGGGATCAGCCAGGGCGCCGGGCCCCACTTCTGAGCACAGAGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252453.12
ENST00000616433.4
CDS-3UTR GCA 90 bp CTGCTCTGTGCTCAGAAGTGGGGCCCGGCGCCCTGGCTGATCCCAGTGAACAGGTGGACTTCTAGCCGCTaGACGCTGTCCCGTAGCACC +
Preference number: 4 (lower is better)
Translates to: LLCAQKWGPAPWLIPVNRWTSSR*TLSRST
Trigger: GGTGCTACGGGACAGCGTGCAGCGGCTAGAAGTCCA...CCTGTTCACTGGGATCAGCCAGGGCGCCGGGCCCCACTTCTGAGCACAGAGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252453.12
ENST00000616433.4
CDS-3UTR GCA 90 bp CAGGGGCCTCACGGGGCGTGGAAGTGTTCCTTGCAGCATGATTGGTCCTCAGTTTCCCGCCTCTGCCGCTaGACGTGGCCTGTGAGGGCC +
Preference number: 4 (lower is better)
Translates to: QGPHGAWKCSLQHDWSSVSRLCR*TWPVRA
Trigger: GGCCCTCACAGGCCACGTGCAGCGGCAGAGGCGGGA...AACTGAGGACCAATCATGCTGCAAGGAACACTTCCACGCCCCGTGAGGCCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252453.12
ENST00000587543.1
ENST00000591200.5
ENST00000616433.4
CDS-3UTR GCA 90 bp AGGGGCCTCACGGGGCGTGGAAGTGTTCCTTGCAGCATGATTGGTCCTCAGTTCTCCCGCCTCTGCCGCTaGACGTGGCCTGTGAGGGCC +
Preference number: 4 (lower is better)
Translates to: RGLTGRGSVPCSMIGPQFSRLCR*TWPVRA
Trigger: GGCCCTCACAGGCCACGTGCAGCGGCAGAGGCGGGA...GAACTGAGGACCAATCATGCTGCAAGGAACACTTCCACGCCCCGTGAGGCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252453.12
ENST00000587543.1
ENST00000591200.5
ENST00000616433.4
CDS-3UTR GCA 90 bp CTGCTCTGTGCTCAGAAGTGGGGCCCGGCGCCCTGGCTGATCCCAGTGAACAGGTCTGTCTCTGCTCTGTaGTCAGAAGTGGGGCCCGGC +
Preference number: 4 (lower is better)
Translates to: LLCAQKWGPAPWLIPVNRSVSAL*SEVGPG
Trigger: GCCGGGCCCCACTTCTGAGCACAGAGCAGAGACAGA...CCTGTTCACTGGGATCAGCCAGGGCGCCGGGCCCCACTTCTGAGCACAGAGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252453.12
ENST00000587543.1
ENST00000616433.4
CDS-3UTR GCA 90 bp CCAATGGGGCTACATCCTCTGCCTTTGTCCCCGCCTGCGTCTGTCTCTGCTCTGACCCCAGCCAGGCTCTaGCGGTCAGTGGCTGTGCCC +
Preference number: 4 (lower is better)
Translates to: PMGLHPLPLSPPASVSALTPARL*RSVAVP
Trigger: GGGCACAGCCACTGACCGGCAGAGCCTGGCTGGGGT...CAGAGCAGAGACAGACGCAGGCGGGGACAAAGGCAGAGGATGTAGCCCCATTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000616433.4
CDS-3UTR CCA 90 bp ACGGGGCGTGGAAGTGTTCCTTGCAGCATGATTGGTCCTCAGTTCCATCCAGGCGTTCTGGGCCGCCCATaGGGGCCGCTGAGGCAGGCC +
Preference number: 4 (lower is better)
Translates to: TGRGSVPCSMIGPQFHPGVLGRP*GPLRQA
Trigger: GGCCTGCCTCAGCGGCCCCCATGGGCGGCCCAGAAC...GCCTGGATGGAACTGAGGACCAATCATGCTGCAAGGAACACTTCCACGCCCCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252453.12
ENST00000616433.4
CDS-3UTR CCA 90 bp GCACAGGGGCCTCACGGGGCGTGGAAGTGTTCCTTGCAGCATGATTGGTCCTCACTTGCCCGAAGTTCCTaGGCTGCATCCCGGCCCCGG +
Preference number: 4 (lower is better)
Translates to: AQGPHGAWKCSLQHDWSSLARSS*AASRPR
Trigger: CCGGGGCCGGGATGCAGCCCAGGAACTTCGGGCAAG...TGAGGACCAATCATGCTGCAAGGAACACTTCCACGCCCCGTGAGGCCCCTGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000252453.12
ENST00000616433.4
CDS-3UTR CCA 90 bp CTGCTCTGTGCTCAGAAGTGGGGCCCGGCGCCCTGGCTGATCCCAGTGAACAGGGGGAGCGCCGCTGTGTaGAGTCTCTCCTGGATCTGT +
Preference number: 4 (lower is better)
Translates to: LLCAQKWGPAPWLIPVNRGSAAV*SLSWIC
Trigger: ACAGATCCAGGAGAGACTCCACACAGCGGCGCTCCC...CCTGTTCACTGGGATCAGCCAGGGCGCCGGGCCCCACTTCTGAGCACAGAGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000252453.12
ENST00000587543.1
ENST00000616433.4
CDS-3UTR CCA 90 bp CTCTGTGCTCAGAAGTGGGGCCCGGCGCCCTGGCTGATCCCAGTGAACAGGCAGGGGCCTCACGGGGCGTaGAAGTGTTCCTTGCAGCAT +
Preference number: 4 (lower is better)
Translates to: LCAQKWGPAPWLIPVNRQGPHGA*KCSLQH
Trigger: ATGCTGCAAGGAACACTTCCACGCCCCGTGAGGCCC...CTGCCTGTTCACTGGGATCAGCCAGGGCGCCGGGCCCCACTTCTGAGCACAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252453.12
ENST00000587543.1
ENST00000616433.4
CDS-3UTR TCA 90 bp CTCACGGGGCGTGGAAGTGTTCCTTGCAGCATGATTGGTCCTCAGTTCCATCCAGCCCATGGGGGCCGCTaGGGCAGGCCGGGTCACCAT +
Preference number: 4 (lower is better)
Translates to: LTGRGSVPCSMIGPQFHPAHGGR*GRPGHH
Trigger: ATGGTGACCCGGCCTGCCTCAGCGGCCCCCATGGGC...TGGATGGAACTGAGGACCAATCATGCTGCAAGGAACACTTCCACGCCCCGTGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252453.12
ENST00000616433.4
CDS-3UTR TCA 90 bp TCCCCGCCTGCGTCTGTCTCTGCTCTGTGCTCAGAAGTGGGGCCCGGCGCCCTGATATCCTCCTCCATCTaGGTCTCCAACAGGCTTGCC +
Preference number: 4 (lower is better)
Translates to: SPPASVSALCSEVGPGALISSSI*VSNRLA
Trigger: GGCAAGCCTGTTGGAGACTCAGATGGAGGAGGATAT...CAGGGCGCCGGGCCCCACTTCTGAGCACAGAGCAGAGACAGACGCAGGCGGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252453.12
ENST00000616433.4
CDS-3UTR TCA 90 bp CGTCTGTCTCTGCTCTGTGCTCAGAAGTGGGGCCCGGCGCCCTGGCTGATCCCACCCATGGGTCCCTCATaGATCCACTCTCCCAGGTCA +
Preference number: 4 (lower is better)
Translates to: RLSLLCAQKWGPAPWLIPPMGPS*IHSPRS
Trigger: TGACCTGGGAGAGTGGATTCATGAGGGACCCATGGG...TGGGATCAGCCAGGGCGCCGGGCCCCACTTCTGAGCACAGAGCAGAGACAGACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616433.4
CDS-3UTR GCA 90 bp TGCCTTTGTCCCCGCCTGCGTCTGTCTCTGCTCTGTGCTCAGAAGTGGGGCCCGCAGCTCCTCATGCTGTaGCAGTTCTGGGCCGCCCAT +
Preference number: 4 (lower is better)
Translates to: CLCPRLRLSLLCAQKWGPQLLML*QFWAAH
Trigger: ATGGGCGGCCCAGAACTGGCACAGCATGAGGAGCTG...CGGGCCCCACTTCTGAGCACAGAGCAGAGACAGACGCAGGCGGGGACAAAGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252453.12
ENST00000616433.4
CDS-3UTR GCA 90 bp GTCTCTGCTCTGTGCTCAGAAGTGGGGCCCGGCGCCCTGGCTGATCCCAGTGAACCCCGGCTGACCTCCTaGCCCAGGAGTTCTATTGTG +
Preference number: 4 (lower is better)
Translates to: VSALCSEVGPGALADPSEPRLTS*PRSSIV
Trigger: CACAATAGAACTCCTGGGGCAGGAGGTCAGCCGGGG...TTCACTGGGATCAGCCAGGGCGCCGGGCCCCACTTCTGAGCACAGAGCAGAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252453.12
ENST00000616433.4
CDS-3UTR GCA 90 bp CAGGGGCCTCACGGGGCGTGGAAGTGTTCCTTGCAGCATGATTGGTCCTCAGTTCCGAAGTTCCTGGGCTaGATCCCGGCCCCGGCTGAC +
Preference number: 4 (lower is better)
Translates to: QGPHGAWKCSLQHDWSSVPKFLG*IPAPAD
Trigger: GTCAGCCGGGGCCGGGATGCAGCCCAGGAACTTCGG...AACTGAGGACCAATCATGCTGCAAGGAACACTTCCACGCCCCGTGAGGCCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000252453.12
ENST00000616433.4
CDS-3UTR GCA 90 bp TTTGTCCCCGCCTGCGTCTGTCTCTGCTCTGTGCTCAGAAGTGGGGCCCGGCGCAGTCTCCAACAGGCTTaGCCGAAGTTCCTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: FVPACVCLCSVLRSGARRSLQQA*PKFLGC
Trigger: GCAGCCCAGGAACTTCGGGCAAGCCTGTTGGAGACT...GCGCCGGGCCCCACTTCTGAGCACAGAGCAGAGACAGACGCAGGCGGGGACAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252453.12
ENST00000616433.4
CDS-3UTR GCA 90 bp CCTCACGGGGCGTGGAAGTGTTCCTTGCAGCATGATTGGTCCTCAGTTCCATCCTCCCGCCTCTGCCGCTaGACGTGGCCTGTGAGGGCC +
Preference number: 4 (lower is better)
Translates to: PHGAWKCSLQHDWSSVPSSRLCR*TWPVRA
Trigger: GGCCCTCACAGGCCACGTGCAGCGGCAGAGGCGGGA...GGATGGAACTGAGGACCAATCATGCTGCAAGGAACACTTCCACGCCCCGTGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252453.12
ENST00000587543.1
ENST00000591200.5
ENST00000616433.4
CDS-3UTR CCA 90 bp TGCCTTTGTCCCCGCCTGCGTCTGTCTCTGCTCTGTGCTCAGAAGTGGGGCCCGAGCTGCAGGGTCCCATaGAAGAGCAGGGTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: CLCPRLRLSLLCAQKWGPSCRVP*KSRVSS
Trigger: GGAGCTGACCCTGCTCTTCCATGGGACCCTGCAGCT...CGGGCCCCACTTCTGAGCACAGAGCAGAGACAGACGCAGGCGGGGACAAAGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252453.12
ENST00000616433.4
CDS-3UTR CCA 90 bp CTCTGTGCTCAGAAGTGGGGCCCGGCGCCCTGGCTGATCCCAGTGAACAGGCAGGTGTGGAGTCTCTCCTaGATCTGTCGCAGCCGATGC +
Preference number: 4 (lower is better)
Translates to: LCAQKWGPAPWLIPVNRQVWSLS*ICRSRC
Trigger: GCATCGGCTGCGACAGATCCAGGAGAGACTCCACAC...CTGCCTGTTCACTGGGATCAGCCAGGGCGCCGGGCCCCACTTCTGAGCACAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252453.12
ENST00000587543.1
ENST00000616433.4
CDS-3UTR CCA 90 bp CAGGGGCCTCACGGGGCGTGGAAGTGTTCCTTGCAGCATGATTGGTCCTCAGTTTGGGGCCCGGCGCCCTaGCTGATCCCAGTGAACAGG +
Preference number: 4 (lower is better)
Translates to: QGPHGAWKCSLQHDWSSVWGPAP*LIPVNR
Trigger: CCTGTTCACTGGGATCAGCCAGGGCGCCGGGCCCCA...AACTGAGGACCAATCATGCTGCAAGGAACACTTCCACGCCCCGTGAGGCCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252453.12
ENST00000587543.1
ENST00000591200.5
ENST00000616433.4
CDS-3UTR CCA 90 bp CAGGGGCCTCACGGGGCGTGGAAGTGTTCCTTGCAGCATGATTGGTCCTCAGTTCTCTGTGCTCAGAAGTaGGGCCCGGCGCCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: QGPHGAWKCSLQHDWSSVLCAQK*GPAPWL
Trigger: CAGCCAGGGCGCCGGGCCCCACTTCTGAGCACAGAG...AACTGAGGACCAATCATGCTGCAAGGAACACTTCCACGCCCCGTGAGGCCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252453.12
ENST00000587543.1
ENST00000616433.4
CDS-3UTR TCA 90 bp CCAATGGGGCTACATCCTCTGCCTTTGTCCCCGCCTGCGTCTGTCTCTGCTCTGTCCTGTACACACCGTTaGGGGCCTGGCCCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: PMGLHPLPLSPPASVSALSCTHR*GPGPAA
Trigger: TGCAGCTGGGCCAGGCCCTCAACGGTGTGTACAGGA...CAGAGCAGAGACAGACGCAGGCGGGGACAAAGGCAGAGGATGTAGCCCCATTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000252453.12
ENST00000616433.4
CDS-3UTR TCA 90 bp GGGCCTCACGGGGCGTGGAAGTGTTCCTTGCAGCATGATTGGTCCTCAGTTCCAGCTGCACGTGGCCTGTaGGGGCCCATAGGATGTGGC +
Preference number: 4 (lower is better)
Translates to: GPHGAWKCSLQHDWSSVPAARGL*GPIGCG
Trigger: GCCACATCCTATGGGCCCTCACAGGCCACGTGCAGC...TGGAACTGAGGACCAATCATGCTGCAAGGAACACTTCCACGCCCCGTGAGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252453.12
ENST00000587543.1
ENST00000591200.5
ENST00000616433.4
CDS-3UTR TCA 90 bp GTCCCCGCCTGCGTCTGTCTCTGCTCTGTGCTCAGAAGTGGGGCCCGGCGCCCTGTGTTCCTTGCAGCATaGTTGGTCCTCAGTTCCATC +
Preference number: 4 (lower is better)
Translates to: VPACVCLCSVLRSGARRPVFLAA*LVLSSI
Trigger: GATGGAACTGAGGACCAATCATGCTGCAAGGAACAC...AGGGCGCCGGGCCCCACTTCTGAGCACAGAGCAGAGACAGACGCAGGCGGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252453.12
ENST00000587543.1
ENST00000616433.4
CDS-3UTR GCA 90 bp TTTGTCCCCGCCTGCGTCTGTCTCTGCTCTGTGCTCAGAAGTGGGGCCCGGCGCCCAGGAGTTCTATTGTaGGGCCATAGAGACCCAGGC +
Preference number: 4 (lower is better)
Translates to: FVPACVCLCSVLRSGARRPGVLL*GHRDPG
Trigger: GCCTGGGTCTCTATGGCCGCACAATAGAACTCCTGG...GCGCCGGGCCCCACTTCTGAGCACAGAGCAGAGACAGACGCAGGCGGGGACAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252453.12
ENST00000616433.4
CDS-3UTR GCA 90 bp CTCTGTGCTCAGAAGTGGGGCCCGGCGCCCTGGCTGATCCCAGTGAACAGGCAGCCAGGAGTTCTATTGTaGGGCCATAGAGACCCAGGC +
Preference number: 4 (lower is better)
Translates to: LCAQKWGPAPWLIPVNRQPGVLL*GHRDPG
Trigger: GCCTGGGTCTCTATGGCCGCACAATAGAACTCCTGG...CTGCCTGTTCACTGGGATCAGCCAGGGCGCCGGGCCCCACTTCTGAGCACAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252453.12
ENST00000616433.4
CDS-3UTR GCA 90 bp GGGCCTCACGGGGCGTGGAAGTGTTCCTTGCAGCATGATTGGTCCTCAGTTCCAACCATCTCCCGCCTCTaGCGCTGCACGTGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: GPHGAWKCSLQHDWSSVPTISRL*RCTWPV
Trigger: CACAGGCCACGTGCAGCGGCAGAGGCGGGAGATGGT...TGGAACTGAGGACCAATCATGCTGCAAGGAACACTTCCACGCCCCGTGAGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252453.12
ENST00000587543.1
ENST00000591200.5
ENST00000616433.4
CDS-3UTR GCA 90 bp CAGGGGCCTCACGGGGCGTGGAAGTGTTCCTTGCAGCATGATTGGTCCTCAGTTACCATCTCCCGCCTCTaGCGCTGCACGTGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: QGPHGAWKCSLQHDWSSVTISRL*RCTWPV
Trigger: CACAGGCCACGTGCAGCGGCAGAGGCGGGAGATGGT...AACTGAGGACCAATCATGCTGCAAGGAACACTTCCACGCCCCGTGAGGCCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252453.12
ENST00000587543.1
ENST00000591200.5
ENST00000616433.4
CDS-3UTR GCA 90 bp CCAATGGGGCTACATCCTCTGCCTTTGTCCCCGCCTGCGTCTGTCTCTGCTCTGTGTCGCAGCCGATGCTaGTGTGCCACCATCTCCCGC +
Preference number: 4 (lower is better)
Translates to: PMGLHPLPLSPPASVSALCRSRC*CATISR
Trigger: GCGGGAGATGGTGGCACAGCAGCATCGGCTGCGACA...CAGAGCAGAGACAGACGCAGGCGGGGACAAAGGCAGAGGATGTAGCCCCATTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252453.12
ENST00000587543.1
ENST00000616433.4
CDS-3UTR GCA 90 bp GTCCCCGCCTGCGTCTGTCTCTGCTCTGTGCTCAGAAGTGGGGCCCGGCGCCCTCGTGGAAGTGTTCCTTaGAGCATGATTGGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: VPACVCLCSVLRSGARRPRGSVP*SMIGPQ
Trigger: CTGAGGACCAATCATGCTGCAAGGAACACTTCCACG...AGGGCGCCGGGCCCCACTTCTGAGCACAGAGCAGAGACAGACGCAGGCGGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252453.12
ENST00000587543.1
ENST00000616433.4
CDS-3UTR GCA 90 bp TTTGTCCCCGCCTGCGTCTGTCTCTGCTCTGTGCTCAGAAGTGGGGCCCGGCGCCTCCGTGCGCAACCTTaGTGTGCGAGTGCAGTACAT +
Preference number: 4 (lower is better)
Translates to: FVPACVCLCSVLRSGARRLRAQP*CASAVH
Trigger: ATGTACTGCACTCGCACAGCAAGGTTGCGCACGGAG...GCGCCGGGCCCCACTTCTGAGCACAGAGCAGAGACAGACGCAGGCGGGGACAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616433.4
CDS-3UTR CCA 90 bp TGCCTTTGTCCCCGCCTGCGTCTGTCTCTGCTCTGTGCTCAGAAGTGGGGCCCGGTGTGGAGTCTCTCCTaGATCTGTCGCAGCCGATGC +
Preference number: 4 (lower is better)
Translates to: CLCPRLRLSLLCAQKWGPVWSLS*ICRSRC
Trigger: GCATCGGCTGCGACAGATCCAGGAGAGACTCCACAC...CGGGCCCCACTTCTGAGCACAGAGCAGAGACAGACGCAGGCGGGGACAAAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252453.12
ENST00000587543.1
ENST00000616433.4
CDS-3UTR CCA 90 bp CCAATGGGGCTACATCCTCTGCCTTTGTCCCCGCCTGCGTCTGTCTCTGCTCTGCAGGCAGATTCAGGCTaGGAGCGCCGCTGTGTGGAG +
Preference number: 4 (lower is better)
Translates to: PMGLHPLPLSPPASVSALQADSG*ERRCVE
Trigger: CTCCACACAGCGGCGCTCCCAGCCTGAATCTGCCTG...CAGAGCAGAGACAGACGCAGGCGGGGACAAAGGCAGAGGATGTAGCCCCATTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252453.12
ENST00000587543.1
ENST00000616433.4
CDS-3UTR CCA 90 bp GCACAGGGGCCTCACGGGGCGTGGAAGTGTTCCTTGCAGCATGATTGGTCCTCACAGGCAGATTCAGGCTaGGAGCGCCGCTGTGTGGAG +
Preference number: 4 (lower is better)
Translates to: AQGPHGAWKCSLQHDWSSQADSG*ERRCVE
Trigger: CTCCACACAGCGGCGCTCCCAGCCTGAATCTGCCTG...TGAGGACCAATCATGCTGCAAGGAACACTTCCACGCCCCGTGAGGCCCCTGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252453.12
ENST00000587543.1
ENST00000591200.5
ENST00000616433.4
CDS-3UTR CCA 90 bp CCTCACGGGGCGTGGAAGTGTTCCTTGCAGCATGATTGGTCCTCAGTTCCATCCTGGGGCCCGGCGCCCTaGCTGATCCCAGTGAACAGG +
Preference number: 4 (lower is better)
Translates to: PHGAWKCSLQHDWSSVPSWGPAP*LIPVNR
Trigger: CCTGTTCACTGGGATCAGCCAGGGCGCCGGGCCCCA...GGATGGAACTGAGGACCAATCATGCTGCAAGGAACACTTCCACGCCCCGTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252453.12
ENST00000587543.1
ENST00000591200.5
ENST00000616433.4
CDS-3UTR CCA 90 bp GCACAGGGGCCTCACGGGGCGTGGAAGTGTTCCTTGCAGCATGATTGGTCCTCAAGGCCTTCACACCGGTaGTCTCCAGCCTCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: AQGPHGAWKCSLQHDWSSRPSHR*SPASPQ
Trigger: CTGGGGAGAGGCTGGAGACCACCGGTGTGAAGGCCT...TGAGGACCAATCATGCTGCAAGGAACACTTCCACGCCCCGTGAGGCCCCTGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000616433.4
CDS-3UTR TCA 90 bp CCTCACGGGGCGTGGAAGTGTTCCTTGCAGCATGATTGGTCCTCAGTTCCATCCGCTGCACGTGGCCTGTaGGGGCCCATAGGATGTGGC +
Preference number: 4 (lower is better)
Translates to: PHGAWKCSLQHDWSSVPSAARGL*GPIGCG
Trigger: GCCACATCCTATGGGCCCTCACAGGCCACGTGCAGC...GGATGGAACTGAGGACCAATCATGCTGCAAGGAACACTTCCACGCCCCGTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252453.12
ENST00000587543.1
ENST00000591200.5
ENST00000616433.4
CDS-3UTR TCA 90 bp ACGGGGCGTGGAAGTGTTCCTTGCAGCATGATTGGTCCTCAGTTCCATCCAGGCGCTGCACGTGGCCTGTaGGGGCCCATAGGATGTGGC +
Preference number: 4 (lower is better)
Translates to: TGRGSVPCSMIGPQFHPGAARGL*GPIGCG
Trigger: GCCACATCCTATGGGCCCTCACAGGCCACGTGCAGC...GCCTGGATGGAACTGAGGACCAATCATGCTGCAAGGAACACTTCCACGCCCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252453.12
ENST00000587543.1
ENST00000591200.5
ENST00000616433.4
CDS-3UTR TCA 90 bp CAGGGGCCTCACGGGGCGTGGAAGTGTTCCTTGCAGCATGATTGGTCCTCAGTTTGCGAGTGCAGTACATaGCAGGCGAGGACCCCAGCC +
Preference number: 4 (lower is better)
Translates to: QGPHGAWKCSLQHDWSSVCECST*QARTPA
Trigger: GGCTGGGGTCCTCGCCTGTCATGTACTGCACTCGCA...AACTGAGGACCAATCATGCTGCAAGGAACACTTCCACGCCCCGTGAGGCCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000616433.4
CDS-3UTR GCA 90 bp GCACAGGGGCCTCACGGGGCGTGGAAGTGTTCCTTGCAGCATGATTGGTCCTCATGGACTTCTAGCCGCTaGACGCTGTCCCGTAGCACC +
Preference number: 4 (lower is better)
Translates to: AQGPHGAWKCSLQHDWSSWTSSR*TLSRST
Trigger: GGTGCTACGGGACAGCGTGCAGCGGCTAGAAGTCCA...TGAGGACCAATCATGCTGCAAGGAACACTTCCACGCCCCGTGAGGCCCCTGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252453.12
ENST00000591200.5
ENST00000616433.4
CDS-3UTR GCA 90 bp GGGCCTCACGGGGCGTGGAAGTGTTCCTTGCAGCATGATTGGTCCTCAGTTCCATGTCGCAGCCGATGCTaGTGTGCCACCATCTCCCGC +
Preference number: 4 (lower is better)
Translates to: GPHGAWKCSLQHDWSSVPCRSRC*CATISR
Trigger: GCGGGAGATGGTGGCACAGCAGCATCGGCTGCGACA...TGGAACTGAGGACCAATCATGCTGCAAGGAACACTTCCACGCCCCGTGAGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252453.12
ENST00000587543.1
ENST00000591200.5
ENST00000616433.4
CDS-3UTR GCA 90 bp GTCCCCGCCTGCGTCTGTCTCTGCTCTGTGCTCAGAAGTGGGGCCCGGCGCCCTGAGATGCCACGACTCTaGTTTAATGAGGGGTGTGTA +
Preference number: 4 (lower is better)
Translates to: VPACVCLCSVLRSGARRPEMPRL*FNEGCV
Trigger: TACACACCCCTCATTAAAGCAGAGTCGTGGCATCTC...AGGGCGCCGGGCCCCACTTCTGAGCACAGAGCAGAGACAGACGCAGGCGGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252453.12
ENST00000587543.1
ENST00000616433.4
CDS-3UTR CCA 90 bp ACGGGGCGTGGAAGTGTTCCTTGCAGCATGATTGGTCCTCAGTTCCATCCAGGCACACCGTTGAGGGCCTaGCCCAGCTGCAGGGTCCCA +
Preference number: 4 (lower is better)
Translates to: TGRGSVPCSMIGPQFHPGTPLRA*PSCRVP
Trigger: TGGGACCCTGCAGCTGGGCCAGGCCCTCAACGGTGT...GCCTGGATGGAACTGAGGACCAATCATGCTGCAAGGAACACTTCCACGCCCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252453.12
ENST00000616433.4
CDS-3UTR CCA 90 bp AGGGGCCTCACGGGGCGTGGAAGTGTTCCTTGCAGCATGATTGGTCCTCAGTTCCAGGCAGATTCAGGCTaGGAGCGCCGCTGTGTGGAG +
Preference number: 4 (lower is better)
Translates to: RGLTGRGSVPCSMIGPQFQADSG*ERRCVE
Trigger: CTCCACACAGCGGCGCTCCCAGCCTGAATCTGCCTG...GAACTGAGGACCAATCATGCTGCAAGGAACACTTCCACGCCCCGTGAGGCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252453.12
ENST00000587543.1
ENST00000591200.5
ENST00000616433.4
CDS-3UTR CCA 90 bp CTCACGGGGCGTGGAAGTGTTCCTTGCAGCATGATTGGTCCTCAGTTCCATCCACTCTGTGCTCAGAAGTaGGGCCCGGCGCCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: LTGRGSVPCSMIGPQFHPLCAQK*GPAPWL
Trigger: CAGCCAGGGCGCCGGGCCCCACTTCTGAGCACAGAG...TGGATGGAACTGAGGACCAATCATGCTGCAAGGAACACTTCCACGCCCCGTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252453.12
ENST00000587543.1
ENST00000616433.4
CDS-3UTR TCA 90 bp TTTGTCCCCGCCTGCGTCTGTCTCTGCTCTGTGCTCAGAAGTGGGGCCCGGCGCGTGTTCCTTGCAGCATaGTTGGTCCTCAGTTCCATC +
Preference number: 4 (lower is better)
Translates to: FVPACVCLCSVLRSGARRVFLAA*LVLSSI
Trigger: GATGGAACTGAGGACCAATCATGCTGCAAGGAACAC...GCGCCGGGCCCCACTTCTGAGCACAGAGCAGAGACAGACGCAGGCGGGGACAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252453.12
ENST00000587543.1
ENST00000616433.4
CDS-3UTR GCA 90 bp CAGGGGCCTCACGGGGCGTGGAAGTGTTCCTTGCAGCATGATTGGTCCTCAGTTCAGCTCCTCATGCTGTaGCAGTTCTGGGCCGCCCAT +
Preference number: 4 (lower is better)
Translates to: QGPHGAWKCSLQHDWSSVQLLML*QFWAAH
Trigger: ATGGGCGGCCCAGAACTGGCACAGCATGAGGAGCTG...AACTGAGGACCAATCATGCTGCAAGGAACACTTCCACGCCCCGTGAGGCCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252453.12
ENST00000616433.4
CDS-3UTR GCA 90 bp CAGGGGCCTCACGGGGCGTGGAAGTGTTCCTTGCAGCATGATTGGTCCTCAGTTAGGGTCAGCTCCTCATaGTGTGCCAGTTCTGGGCCG +
Preference number: 4 (lower is better)
Translates to: QGPHGAWKCSLQHDWSSVRVSSS*CASSGP
Trigger: CGGCCCAGAACTGGCACAGCATGAGGAGCTGACCCT...AACTGAGGACCAATCATGCTGCAAGGAACACTTCCACGCCCCGTGAGGCCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252453.12
ENST00000616433.4
CDS-3UTR GCA 90 bp ACGGGGCGTGGAAGTGTTCCTTGCAGCATGATTGGTCCTCAGTTCCATCCAGGCCAGCCGATGCTGCTGTaGCACCATCTCCCGCCTCTG +
Preference number: 4 (lower is better)
Translates to: TGRGSVPCSMIGPQFHPGQPMLL*HHLPPL
Trigger: CAGAGGCGGGAGATGGTGGCACAGCAGCATCGGCTG...GCCTGGATGGAACTGAGGACCAATCATGCTGCAAGGAACACTTCCACGCCCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252453.12
ENST00000587543.1
ENST00000591200.5
ENST00000616433.4
CDS-3UTR GCA 90 bp CTGCTCTGTGCTCAGAAGTGGGGCCCGGCGCCCTGGCTGATCCCAGTGAACAGGCGTGGAAGTGTTCCTTaGAGCATGATTGGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: LLCAQKWGPAPWLIPVNRRGSVP*SMIGPQ
Trigger: CTGAGGACCAATCATGCTGCAAGGAACACTTCCACG...CCTGTTCACTGGGATCAGCCAGGGCGCCGGGCCCCACTTCTGAGCACAGAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252453.12
ENST00000587543.1
ENST00000616433.4
CDS-3UTR GCA 90 bp AGGGGCCTCACGGGGCGTGGAAGTGTTCCTTGCAGCATGATTGGTCCTCAGTTCTCTGTCTCTGCTCTGTaGTCAGAAGTGGGGCCCGGC +
Preference number: 4 (lower is better)
Translates to: RGLTGRGSVPCSMIGPQFSVSAL*SEVGPG
Trigger: GCCGGGCCCCACTTCTGAGCACAGAGCAGAGACAGA...GAACTGAGGACCAATCATGCTGCAAGGAACACTTCCACGCCCCGTGAGGCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252453.12
ENST00000587543.1
ENST00000616433.4
CDS-3UTR CCA 90 bp GGGCCTCACGGGGCGTGGAAGTGTTCCTTGCAGCATGATTGGTCCTCAGTTCCAGACCCAGGCTGTTCCTaGCCTTTGTCAGCCGTCCCT +
Preference number: 4 (lower is better)
Translates to: GPHGAWKCSLQHDWSSVPDPGCS*PLSAVP
Trigger: AGGGACGGCTGACAAAGGCCAGGAACAGCCTGGGTC...TGGAACTGAGGACCAATCATGCTGCAAGGAACACTTCCACGCCCCGTGAGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252453.12
ENST00000616433.4
CDS-3UTR CCA 90 bp GGGCGTGGAAGTGTTCCTTGCAGCATGATTGGTCCTCAGTTCCATCCAGGCAGACTCTGCCGCTGCACGTaGCCTGTGAGGGCCCATAGG +
Preference number: 4 (lower is better)
Translates to: GRGSVPCSMIGPQFHPGRLCRCT*PVRAHR
Trigger: CCTATGGGCCCTCACAGGCCACGTGCAGCGGCAGAG...TCTGCCTGGATGGAACTGAGGACCAATCATGCTGCAAGGAACACTTCCACGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252453.12
ENST00000587543.1
ENST00000591200.5
ENST00000616433.4
CDS-3UTR CCA 90 bp CAGGGGCCTCACGGGGCGTGGAAGTGTTCCTTGCAGCATGATTGGTCCTCAGTTGGGCCTCACGGGGCGTaGAAGTGTTCCTTGCAGCAT +
Preference number: 4 (lower is better)
Translates to: QGPHGAWKCSLQHDWSSVGPHGA*KCSLQH
Trigger: ATGCTGCAAGGAACACTTCCACGCCCCGTGAGGCCC...AACTGAGGACCAATCATGCTGCAAGGAACACTTCCACGCCCCGTGAGGCCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252453.12
ENST00000587543.1
ENST00000591200.5
ENST00000616433.4
CDS-3UTR CCA 90 bp GGGCCTCACGGGGCGTGGAAGTGTTCCTTGCAGCATGATTGGTCCTCAGTTCCAGGGCCTCACGGGGCGTaGAAGTGTTCCTTGCAGCAT +
Preference number: 4 (lower is better)
Translates to: GPHGAWKCSLQHDWSSVPGPHGA*KCSLQH
Trigger: ATGCTGCAAGGAACACTTCCACGCCCCGTGAGGCCC...TGGAACTGAGGACCAATCATGCTGCAAGGAACACTTCCACGCCCCGTGAGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252453.12
ENST00000587543.1
ENST00000591200.5
ENST00000616433.4
CDS-3UTR CCA 90 bp CCTCACGGGGCGTGGAAGTGTTCCTTGCAGCATGATTGGTCCTCAGTTCCATCCCCAGCCTCTCCCCAGTaGATCCCACTGCTGCAGCAC +
Preference number: 4 (lower is better)
Translates to: PHGAWKCSLQHDWSSVPSPASPQ*IPLLQH
Trigger: GTGCTGCAGCAGTGGGATCCACTGGGGAGAGGCTGG...GGATGGAACTGAGGACCAATCATGCTGCAAGGAACACTTCCACGCCCCGTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000591200.5
ENST00000616433.4
CDS-3UTR TCA 90 bp CTCACGGGGCGTGGAAGTGTTCCTTGCAGCATGATTGGTCCTCAGTTCCATCCATCCTGTACACACCGTTaGGGGCCTGGCCCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: LTGRGSVPCSMIGPQFHPSCTHR*GPGPAA
Trigger: TGCAGCTGGGCCAGGCCCTCAACGGTGTGTACAGGA...TGGATGGAACTGAGGACCAATCATGCTGCAAGGAACACTTCCACGCCCCGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252453.12
ENST00000616433.4
CDS-3UTR TCA 90 bp GCACAGGGGCCTCACGGGGCGTGGAAGTGTTCCTTGCAGCATGATTGGTCCTCACAAGTCCAGCTGCAGTaGATTTACCCGCGAGGCCTT +
Preference number: 4 (lower is better)
Translates to: AQGPHGAWKCSLQHDWSSQVQLQ*IYPRGL
Trigger: AAGGCCTCGCGGGTAAATTCACTGCAGCTGGACTTG...TGAGGACCAATCATGCTGCAAGGAACACTTCCACGCCCCGTGAGGCCCCTGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616433.4
CDS-3UTR GCA 90 bp CTCACGGGGCGTGGAAGTGTTCCTTGCAGCATGATTGGTCCTCAGTTCCATCCACAGCCGATGCTGCTGTaGCACCATCTCCCGCCTCTG +
Preference number: 4 (lower is better)
Translates to: LTGRGSVPCSMIGPQFHPQPMLL*HHLPPL
Trigger: CAGAGGCGGGAGATGGTGGCACAGCAGCATCGGCTG...TGGATGGAACTGAGGACCAATCATGCTGCAAGGAACACTTCCACGCCCCGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252453.12
ENST00000587543.1
ENST00000591200.5
ENST00000616433.4
CDS-3UTR GCA 90 bp AGGGGCCTCACGGGGCGTGGAAGTGTTCCTTGCAGCATGATTGGTCCTCAGTTCATCTGTCGCAGCCGATaGTGCTGTGCCACCATCTCC +
Preference number: 4 (lower is better)
Translates to: RGLTGRGSVPCSMIGPQFICRSR*CCATIS
Trigger: GGAGATGGTGGCACAGCAGCATCGGCTGCGACAGAT...GAACTGAGGACCAATCATGCTGCAAGGAACACTTCCACGCCCCGTGAGGCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252453.12
ENST00000587543.1
ENST00000591200.5
ENST00000616433.4
CDS-3UTR GCA 90 bp CAGGGGCCTCACGGGGCGTGGAAGTGTTCCTTGCAGCATGATTGGTCCTCAGTTATCTGTCGCAGCCGATaGTGCTGTGCCACCATCTCC +
Preference number: 4 (lower is better)
Translates to: QGPHGAWKCSLQHDWSSVICRSR*CCATIS
Trigger: GGAGATGGTGGCACAGCAGCATCGGCTGCGACAGAT...AACTGAGGACCAATCATGCTGCAAGGAACACTTCCACGCCCCGTGAGGCCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252453.12
ENST00000587543.1
ENST00000591200.5
ENST00000616433.4
CDS-3UTR GCA 90 bp CTGCTCTGTGCTCAGAAGTGGGGCCCGGCGCCCTGGCTGATCCCAGTGAACAGGGAGATGCCACGACTCTaGTTTAATGAGGGGTGTGTA +
Preference number: 4 (lower is better)
Translates to: LLCAQKWGPAPWLIPVNREMPRL*FNEGCV
Trigger: TACACACCCCTCATTAAAGCAGAGTCGTGGCATCTC...CCTGTTCACTGGGATCAGCCAGGGCGCCGGGCCCCACTTCTGAGCACAGAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252453.12
ENST00000587543.1
ENST00000616433.4
CDS-3UTR CCA 90 bp ACGGGGCGTGGAAGTGTTCCTTGCAGCATGATTGGTCCTCAGTTCCATCCAGGCGACCCAGGCTGTTCCTaGCCTTTGTCAGCCGTCCCT +
Preference number: 4 (lower is better)
Translates to: TGRGSVPCSMIGPQFHPGDPGCS*PLSAVP
Trigger: AGGGACGGCTGACAAAGGCCAGGAACAGCCTGGGTC...GCCTGGATGGAACTGAGGACCAATCATGCTGCAAGGAACACTTCCACGCCCCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252453.12
ENST00000616433.4
CDS-3UTR CCA 90 bp CAGGGGCCTCACGGGGCGTGGAAGTGTTCCTTGCAGCATGATTGGTCCTCAGTTGTGTGGAGTCTCTCCTaGATCTGTCGCAGCCGATGC +
Preference number: 4 (lower is better)
Translates to: QGPHGAWKCSLQHDWSSVVWSLS*ICRSRC
Trigger: GCATCGGCTGCGACAGATCCAGGAGAGACTCCACAC...AACTGAGGACCAATCATGCTGCAAGGAACACTTCCACGCCCCGTGAGGCCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252453.12
ENST00000587543.1
ENST00000591200.5
ENST00000616433.4
CDS-3UTR CCA 90 bp ACGGGGCGTGGAAGTGTTCCTTGCAGCATGATTGGTCCTCAGTTCCATCCAGGCGGGAGCGCCGCTGTGTaGAGTCTCTCCTGGATCTGT +
Preference number: 4 (lower is better)
Translates to: TGRGSVPCSMIGPQFHPGGSAAV*SLSWIC
Trigger: ACAGATCCAGGAGAGACTCCACACAGCGGCGCTCCC...GCCTGGATGGAACTGAGGACCAATCATGCTGCAAGGAACACTTCCACGCCCCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252453.12
ENST00000587543.1
ENST00000591200.5
ENST00000616433.4
CDS-3UTR CCA 90 bp TGCCTTTGTCCCCGCCTGCGTCTGTCTCTGCTCTGTGCTCAGAAGTGGGGCCCGTCCTTGCAGCATGATTaGTCCTCAGTTCCATCCAGG +
Preference number: 4 (lower is better)
Translates to: CLCPRLRLSLLCAQKWGPSLQHD*SSVPSR
Trigger: CCTGGATGGAACTGAGGACCAATCATGCTGCAAGGA...CGGGCCCCACTTCTGAGCACAGAGCAGAGACAGACGCAGGCGGGGACAAAGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252453.12
ENST00000587543.1
ENST00000616433.4
CDS-3UTR CCA 90 bp GGGCGTGGAAGTGTTCCTTGCAGCATGATTGGTCCTCAGTTCCATCCAGGCAGACCAGCCTCTCCCCAGTaGATCCCACTGCTGCAGCAC +
Preference number: 4 (lower is better)
Translates to: GRGSVPCSMIGPQFHPGRPASPQ*IPLLQH
Trigger: GTGCTGCAGCAGTGGGATCCACTGGGGAGAGGCTGG...TCTGCCTGGATGGAACTGAGGACCAATCATGCTGCAAGGAACACTTCCACGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591200.5
ENST00000616433.4
CDS-3UTR GCA 90 bp CTCACGGGGCGTGGAAGTGTTCCTTGCAGCATGATTGGTCCTCAGTTCCATCCACCCCGGCTGACCTCCTaGCCCAGGAGTTCTATTGTG +
Preference number: 4 (lower is better)
Translates to: LTGRGSVPCSMIGPQFHPPRLTS*PRSSIV
Trigger: CACAATAGAACTCCTGGGGCAGGAGGTCAGCCGGGG...TGGATGGAACTGAGGACCAATCATGCTGCAAGGAACACTTCCACGCCCCGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252453.12
ENST00000616433.4
CDS-3UTR GCA 90 bp GGGCGTGGAAGTGTTCCTTGCAGCATGATTGGTCCTCAGTTCCATCCAGGCAGATGGACTTCTAGCCGCTaGACGCTGTCCCGTAGCACC +
Preference number: 4 (lower is better)
Translates to: GRGSVPCSMIGPQFHPGRWTSSR*TLSRST
Trigger: GGTGCTACGGGACAGCGTGCAGCGGCTAGAAGTCCA...TCTGCCTGGATGGAACTGAGGACCAATCATGCTGCAAGGAACACTTCCACGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252453.12
ENST00000591200.5
ENST00000616433.4
CDS-3UTR GCA 90 bp ACGGGGCGTGGAAGTGTTCCTTGCAGCATGATTGGTCCTCAGTTCCATCCAGGCATCTGTCGCAGCCGATaGTGCTGTGCCACCATCTCC +
Preference number: 4 (lower is better)
Translates to: TGRGSVPCSMIGPQFHPGICRSR*CCATIS
Trigger: GGAGATGGTGGCACAGCAGCATCGGCTGCGACAGAT...GCCTGGATGGAACTGAGGACCAATCATGCTGCAAGGAACACTTCCACGCCCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252453.12
ENST00000587543.1
ENST00000591200.5
ENST00000616433.4
CDS-3UTR CCA 90 bp AGGGGCCTCACGGGGCGTGGAAGTGTTCCTTGCAGCATGATTGGTCCTCAGTTCGTAGGGCATCCCCCATaGGTCCCTCATGAATCCACT +
Preference number: 4 (lower is better)
Translates to: RGLTGRGSVPCSMIGPQFVGHPP*VPHEST
Trigger: AGTGGATTCATGAGGGACCCATGGGGGATGCCCTAC...GAACTGAGGACCAATCATGCTGCAAGGAACACTTCCACGCCCCGTGAGGCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000616433.4
CDS-3UTR TCA 90 bp GGGCCTCACGGGGCGTGGAAGTGTTCCTTGCAGCATGATTGGTCCTCAGTTCCAATATCCTCCTCCATCTaGGTCTCCAACAGGCTTGCC +
Preference number: 4 (lower is better)
Translates to: GPHGAWKCSLQHDWSSVPISSSI*VSNRLA
Trigger: GGCAAGCCTGTTGGAGACTCAGATGGAGGAGGATAT...TGGAACTGAGGACCAATCATGCTGCAAGGAACACTTCCACGCCCCGTGAGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252453.12
ENST00000616433.4
CDS-3UTR GCA 90 bp GGGCGTGGAAGTGTTCCTTGCAGCATGATTGGTCCTCAGTTCCATCCAGGCAGAAGTCTCCAACAGGCTTaGCCGAAGTTCCTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: GRGSVPCSMIGPQFHPGRSLQQA*PKFLGC
Trigger: GCAGCCCAGGAACTTCGGGCAAGCCTGTTGGAGACT...TCTGCCTGGATGGAACTGAGGACCAATCATGCTGCAAGGAACACTTCCACGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252453.12
ENST00000616433.4
CDS-3UTR CCA 90 bp CTCACGGGGCGTGGAAGTGTTCCTTGCAGCATGATTGGTCCTCAGTTCCATCCAGTGTGGAGTCTCTCCTaGATCTGTCGCAGCCGATGC +
Preference number: 4 (lower is better)
Translates to: LTGRGSVPCSMIGPQFHPVWSLS*ICRSRC
Trigger: GCATCGGCTGCGACAGATCCAGGAGAGACTCCACAC...TGGATGGAACTGAGGACCAATCATGCTGCAAGGAACACTTCCACGCCCCGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252453.12
ENST00000587543.1
ENST00000591200.5
ENST00000616433.4
CDS-3UTR TCA 90 bp GGGCCTCACGGGGCGTGGAAGTGTTCCTTGCAGCATGATTGGTCCTCAGTTCCAGTGTTCCTTGCAGCATaGTTGGTCCTCAGTTCCATC +
Preference number: 4 (lower is better)
Translates to: GPHGAWKCSLQHDWSSVPVFLAA*LVLSSI
Trigger: GATGGAACTGAGGACCAATCATGCTGCAAGGAACAC...TGGAACTGAGGACCAATCATGCTGCAAGGAACACTTCCACGCCCCGTGAGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252453.12
ENST00000587543.1
ENST00000591200.5
ENST00000616433.4
CDS-3UTR GCA 90 bp ACGGGGCGTGGAAGTGTTCCTTGCAGCATGATTGGTCCTCAGTTCCATCCAGGCCGTGGAAGTGTTCCTTaGAGCATGATTGGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: TGRGSVPCSMIGPQFHPGRGSVP*SMIGPQ
Trigger: CTGAGGACCAATCATGCTGCAAGGAACACTTCCACG...GCCTGGATGGAACTGAGGACCAATCATGCTGCAAGGAACACTTCCACGCCCCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252453.12
ENST00000587543.1
ENST00000591200.5
ENST00000616433.4
CDS-3UTR CCA 90 bp ACGGGGCGTGGAAGTGTTCCTTGCAGCATGATTGGTCCTCAGTTCCATCCAGGCTCCTTGCAGCATGATTaGTCCTCAGTTCCATCCAGG +
Preference number: 4 (lower is better)
Translates to: TGRGSVPCSMIGPQFHPGSLQHD*SSVPSR
Trigger: CCTGGATGGAACTGAGGACCAATCATGCTGCAAGGA...GCCTGGATGGAACTGAGGACCAATCATGCTGCAAGGAACACTTCCACGCCCCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252453.12
ENST00000587543.1
ENST00000591200.5
ENST00000616433.4
CDS-3UTR CCA 90 bp CCTCACGGGGCGTGGAAGTGTTCCTTGCAGCATGATTGGTCCTCAGTTCCATCCTCCTTGCAGCATGATTaGTCCTCAGTTCCATCCAGG +
Preference number: 4 (lower is better)
Translates to: PHGAWKCSLQHDWSSVPSSLQHD*SSVPSR
Trigger: CCTGGATGGAACTGAGGACCAATCATGCTGCAAGGA...GGATGGAACTGAGGACCAATCATGCTGCAAGGAACACTTCCACGCCCCGTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252453.12
ENST00000587543.1
ENST00000591200.5
ENST00000616433.4
CDS-3UTR TCA 90 bp CTCACGGGGCGTGGAAGTGTTCCTTGCAGCATGATTGGTCCTCAGTTCCATCCAGTGTTCCTTGCAGCATaGTTGGTCCTCAGTTCCATC +
Preference number: 4 (lower is better)
Translates to: LTGRGSVPCSMIGPQFHPVFLAA*LVLSSI
Trigger: GATGGAACTGAGGACCAATCATGCTGCAAGGAACAC...TGGATGGAACTGAGGACCAATCATGCTGCAAGGAACACTTCCACGCCCCGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252453.12
ENST00000587543.1
ENST00000591200.5
ENST00000616433.4
CDS-3UTR GCA 90 bp CCTCACGGGGCGTGGAAGTGTTCCTTGCAGCATGATTGGTCCTCAGTTCCATCCGAGATGCCACGACTCTaGTTTAATGAGGGGTGTGTA +
Preference number: 4 (lower is better)
Translates to: PHGAWKCSLQHDWSSVPSEMPRL*FNEGCV
Trigger: TACACACCCCTCATTAAAGCAGAGTCGTGGCATCTC...GGATGGAACTGAGGACCAATCATGCTGCAAGGAACACTTCCACGCCCCGTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252453.12
ENST00000587543.1
ENST00000616433.4
CDS-3UTR CCA 90 bp CTCACGGGGCGTGGAAGTGTTCCTTGCAGCATGATTGGTCCTCAGTTCCATCCATCCTTGCAGCATGATTaGTCCTCAGTTCCATCCAGG +
Preference number: 4 (lower is better)
Translates to: LTGRGSVPCSMIGPQFHPSLQHD*SSVPSR
Trigger: CCTGGATGGAACTGAGGACCAATCATGCTGCAAGGA...TGGATGGAACTGAGGACCAATCATGCTGCAAGGAACACTTCCACGCCCCGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252453.12
ENST00000587543.1
ENST00000591200.5
ENST00000616433.4
CDS TCA 90 bp CTCCAGCCTCTCCCCAGTGGATCCCACTGCTGCAGCACGGGCGCCTaGGGACCGGCCCCTTCTGTCTCCCAGTGTCTGTGGACCAGCCGC +
Preference number: 5 (lower is better)
Translates to: LQPLPSGSHCCSTGA*GPAPSVSQCLWTSR
Trigger: GCGGCTGGTCCACAGACACTGGGAGACAGAAGGGGCCGGTCCTCAGGCGCCCGTGCTGCAGCAGTGGGATCCACTGGGGAGAGGCTGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616433.4
CDS GCA 90 bp TGGCCCAGCTGCAGGGTCCCATGGAAGAGCAGGGTCAGCTCCTCATaGTGTGCCAGTTCTGGGCCGCCCATGGGGGCCGCTGAGGCAGGC +
Preference number: 5 (lower is better)
Translates to: WPSCRVPWKSRVSSS*CASSGPPMGAAEAG
Trigger: GCCTGCCTCAGCGGCCCCCATGGGCGGCCCAGAACTGGCACAGCATGAGGAGCTGACCCTGCTCTTCCATGGGACCCTGCAGCTGGGCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252453.12
ENST00000616433.4
CDS CCA 90 bp AGAGCAGGGTCAGCTCCTCATGCTGTGCCAGTTCTGGGCCGCCCATaGGGGCCGCTGAGGCAGGCCGGGTCACCATTGCCAGGGCCCAGA +
Preference number: 5 (lower is better)
Translates to: RAGSAPHAVPVLGRP*GPLRQAGSPLPGPR
Trigger: TCTGGGCCCTGGCAATGGTGACCCGGCCTGCCTCAGCGGCCCCCATGGGCGGCCCAGAACTGGCACAGCATGAGGAGCTGACCCTGCTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252453.12
ENST00000616433.4
CDS-3UTR CAA 90 bp GTCCCCGCCTGCGTCTGTCTCTGCTCTGTGCTCAGAAGTGGGGCCCGGCGCCCTGTCCTGTACACACCGTaGAGGGCCTGGCCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: VPACVCLCSVLRSGARRPVLYTP*RAWPSC
Trigger: GCAGCTGGGCCAGGCCCTCAACGGTGTGTACAGGAC...AGGGCGCCGGGCCCCACTTCTGAGCACAGAGCAGAGACAGACGCAGGCGGGGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252453.12
ENST00000616433.4
CDS GCA 90 bp CGCTGTGTGGAGTCTCTCCTGGATCTGTCGCAGCCGATGCTGCTGTaGCACCATCTCCCGCCTCTGCCGCTGCACGTGGCCTGTGAGGGC +
Preference number: 5 (lower is better)
Translates to: RCVESLLDLSQPMLL*HHLPPLPLHVACEG
Trigger: GCCCTCACAGGCCACGTGCAGCGGCAGAGGCGGGAGATGGTGGCACAGCAGCATCGGCTGCGACAGATCCAGGAGAGACTCCACACAGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252453.12
ENST00000587543.1
ENST00000591200.5
ENST00000616433.4
CDS GCA 90 bp AGCGCCGCTGTGTGGAGTCTCTCCTGGATCTGTCGCAGCCGATGCTaGTGTGCCACCATCTCCCGCCTCTGCCGCTGCACGTGGCCTGTG +
Preference number: 5 (lower is better)
Translates to: SAAVWSLSWICRSRC*CATISRLCRCTWPV
Trigger: CACAGGCCACGTGCAGCGGCAGAGGCGGGAGATGGTGGCACAGCAGCATCGGCTGCGACAGATCCAGGAGAGACTCCACACAGCGGCGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252453.12
ENST00000587543.1
ENST00000591200.5
ENST00000616433.4
CDS-3UTR CAA 90 bp CTGTCTCTGCTCTGTGCTCAGAAGTGGGGCCCGGCGCCCTGGCTGATCCCAGTGGGCTGTTCCTGGCCTTaGTCAGCCGTCCCTCCGTGG +
Preference number: 5 (lower is better)
Translates to: LSLLCAQKWGPAPWLIPVGCSWP*SAVPPW
Trigger: CCACGGAGGGACGGCTGACAAAGGCCAGGAACAGCC...CACTGGGATCAGCCAGGGCGCCGGGCCCCACTTCTGAGCACAGAGCAGAGACAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252453.12
ENST00000616433.4
CDS GCA 90 bp TGGATCTGTCGCAGCCGATGCTGCTGTGCCACCATCTCCCGCCTCTaGCGCTGCACGTGGCCTGTGAGGGCCCATAGGATGTGGCTCTGC +
Preference number: 5 (lower is better)
Translates to: WICRSRCCCATISRL*RCTWPVRAHRMWLC
Trigger: GCAGAGCCACATCCTATGGGCCCTCACAGGCCACGTGCAGCGGCAGAGGCGGGAGATGGTGGCACAGCAGCATCGGCTGCGACAGATCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252453.12
ENST00000587543.1
ENST00000591200.5
ENST00000616433.4
CDS-3UTR CAA 90 bp TGCCTTTGTCCCCGCCTGCGTCTGTCTCTGCTCTGTGCTCAGAAGTGGGGCCCGGGCTGTTCCTGGCCTTaGTCAGCCGTCCCTCCGTGG +
Preference number: 5 (lower is better)
Translates to: CLCPRLRLSLLCAQKWGPGCSWP*SAVPPW
Trigger: CCACGGAGGGACGGCTGACAAAGGCCAGGAACAGCC...CGGGCCCCACTTCTGAGCACAGAGCAGAGACAGACGCAGGCGGGGACAAAGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252453.12
ENST00000616433.4
CDS-3UTR CAA 90 bp TCCCCGCCTGCGTCTGTCTCTGCTCTGTGCTCAGAAGTGGGGCCCGGCGCCCTGGCCCCAGGAGTTCTATaGTGCGGCCATAGAGACCCA +
Preference number: 5 (lower is better)
Translates to: SPPASVSALCSEVGPGALAPGVL*CGHRDP
Trigger: TGGGTCTCTATGGCCGCACAATAGAACTCCTGGGGC...CAGGGCGCCGGGCCCCACTTCTGAGCACAGAGCAGAGACAGACGCAGGCGGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000252453.12
ENST00000616433.4
CDS-3UTR CAA 90 bp TTGTCCCCGCCTGCGTCTGTCTCTGCTCTGTGCTCAGAAGTGGGGCCCGGCGCCGAGTCTCCAACAGGCTaGCCCGAAGTTCCTGGGCTG +
Preference number: 5 (lower is better)
Translates to: LSPPASVSALCSEVGPGAESPTG*PEVPGL
Trigger: CAGCCCAGGAACTTCGGGCAAGCCTGTTGGAGACTC...GGCGCCGGGCCCCACTTCTGAGCACAGAGCAGAGACAGACGCAGGCGGGGACAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252453.12
ENST00000587543.1
ENST00000616433.4
CDS TCA 90 bp TCCTGGCCTTTGTCAGCCGTCCCTCCGTGGTCCTGTACACACCGTTaGGGGCCTGGCCCAGCTGCAGGGTCCCATGGAAGAGCAGGGTCA +
Preference number: 5 (lower is better)
Translates to: SWPLSAVPPWSCTHR*GPGPAAGSHGRAGS
Trigger: TGACCCTGCTCTTCCATGGGACCCTGCAGCTGGGCCAGGCCCTCAACGGTGTGTACAGGACCACGGAGGGACGGCTGACAAAGGCCAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252453.12
ENST00000616433.4
CDS TCA 90 bp CCAACAGGCTTGCCCGAAGTTCCTGGGCTGCATCCCGGCCCCGGCTaGCCTCCTGCCCCAGGAGTTCTATTGTGCGGCCATAGAGACCCA +
Preference number: 5 (lower is better)
Translates to: PTGLPEVPGLHPGPG*PPAPGVLLCGHRDP
Trigger: TGGGTCTCTATGGCCGCACAATAGAACTCCTGGGGCAGGAGGTCAGCCGGGGCCGGGATGCAGCCCAGGAACTTCGGGCAAGCCTGTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252453.12
ENST00000616433.4
CDS CCA 90 bp GTCCTGTACACACCGTTGAGGGCCTGGCCCAGCTGCAGGGTCCCATaGAAGAGCAGGGTCAGCTCCTCATGCTGTGCCAGTTCTGGGCCG +
Preference number: 5 (lower is better)
Translates to: VLYTPLRAWPSCRVP*KSRVSSSCCASSGP
Trigger: CGGCCCAGAACTGGCACAGCATGAGGAGCTGACCCTGCTCTTCCATGGGACCCTGCAGCTGGGCCAGGCCCTCAACGGTGTGTACAGGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252453.12
ENST00000616433.4
CDS TCA 90 bp CCCTGCACAGGGGCCTCACGGGGCGTGGAAGTGTTCCTTGCAGCATaGTTGGTCCTCAGTTCCATCCAGGCAGATTCAGGCTGGGAGCGC +
Preference number: 5 (lower is better)
Translates to: PCTGASRGVEVFLAA*LVLSSIQADSGWER
Trigger: GCGCTCCCAGCCTGAATCTGCCTGGATGGAACTGAGGACCAATCATGCTGCAAGGAACACTTCCACGCCCCGTGAGGCCCCTGTGCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252453.12
ENST00000587543.1
ENST00000591200.5
ENST00000616433.4
CDS-3UTR CAA 90 bp CCTCACGGGGCGTGGAAGTGTTCCTTGCAGCATGATTGGTCCTCAGTTCCATCCGTCCTGTACACACCGTaGAGGGCCTGGCCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: PHGAWKCSLQHDWSSVPSVLYTP*RAWPSC
Trigger: GCAGCTGGGCCAGGCCCTCAACGGTGTGTACAGGAC...GGATGGAACTGAGGACCAATCATGCTGCAAGGAACACTTCCACGCCCCGTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252453.12
ENST00000616433.4
CDS-3UTR CAA 90 bp CTTTGTCCCCGCCTGCGTCTGTCTCTGCTCTGTGCTCAGAAGTGGGGCCCGGCGGCGTGGAAGTGTTCCTaGCAGCATGATTGGTCCTCA +
Preference number: 5 (lower is better)
Translates to: LCPRLRLSLLCAQKWGPAAWKCS*QHDWSS
Trigger: TGAGGACCAATCATGCTGCAAGGAACACTTCCACGC...CGCCGGGCCCCACTTCTGAGCACAGAGCAGAGACAGACGCAGGCGGGGACAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252453.12
ENST00000587543.1
ENST00000616433.4
CDS-3UTR CAA 90 bp CTCTGTGCTCAGAAGTGGGGCCCGGCGCCCTGGCTGATCCCAGTGAACAGGCAGGCGTGGAAGTGTTCCTaGCAGCATGATTGGTCCTCA +
Preference number: 5 (lower is better)
Translates to: LCAQKWGPAPWLIPVNRQAWKCS*QHDWSS
Trigger: TGAGGACCAATCATGCTGCAAGGAACACTTCCACGC...CTGCCTGTTCACTGGGATCAGCCAGGGCGCCGGGCCCCACTTCTGAGCACAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252453.12
ENST00000587543.1
ENST00000616433.4
CDS-3UTR CAA 90 bp CCAATGGGGCTACATCCTCTGCCTTTGTCCCCGCCTGCGTCTGTCTCTGCTCTGGCTCCGTGCGCAACCTaGCTGTGCGAGTGCAGTACA +
Preference number: 5 (lower is better)
Translates to: PMGLHPLPLSPPASVSALAPCAT*LCECST
Trigger: TGTACTGCACTCGCACAGCAAGGTTGCGCACGGAGC...CAGAGCAGAGACAGACGCAGGCGGGGACAAAGGCAGAGGATGTAGCCCCATTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616433.4
CDS GCA 90 bp AGCTCCTCCCTGCACAGGGGCCTCACGGGGCGTGGAAGTGTTCCTTaGAGCATGATTGGTCCTCAGTTCCATCCAGGCAGATTCAGGCTG +
Preference number: 5 (lower is better)
Translates to: SSSLHRGLTGRGSVP*SMIGPQFHPGRFRL
Trigger: CAGCCTGAATCTGCCTGGATGGAACTGAGGACCAATCATGCTGCAAGGAACACTTCCACGCCCCGTGAGGCCCCTGTGCAGGGAGGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252453.12
ENST00000587543.1
ENST00000591200.5
ENST00000616433.4
CDS-3UTR CAA 90 bp ACGGGGCGTGGAAGTGTTCCTTGCAGCATGATTGGTCCTCAGTTCCATCCAGGCGAGTCTCCAACAGGCTaGCCCGAAGTTCCTGGGCTG +
Preference number: 5 (lower is better)
Translates to: TGRGSVPCSMIGPQFHPGESPTG*PEVPGL
Trigger: CAGCCCAGGAACTTCGGGCAAGCCTGTTGGAGACTC...GCCTGGATGGAACTGAGGACCAATCATGCTGCAAGGAACACTTCCACGCCCCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252453.12
ENST00000587543.1
ENST00000616433.4
CDS-3UTR CAA 90 bp GGGCGTGGAAGTGTTCCTTGCAGCATGATTGGTCCTCAGTTCCATCCAGGCAGAGAGTCTCCAACAGGCTaGCCCGAAGTTCCTGGGCTG +
Preference number: 5 (lower is better)
Translates to: GRGSVPCSMIGPQFHPGRESPTG*PEVPGL
Trigger: CAGCCCAGGAACTTCGGGCAAGCCTGTTGGAGACTC...TCTGCCTGGATGGAACTGAGGACCAATCATGCTGCAAGGAACACTTCCACGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252453.12
ENST00000587543.1
ENST00000616433.4
CDS TCA 90 bp CATGAATCCACTCTCCCAGGTCATCTTTGGCAAGTCCAGCTGCAGTaGATTTACCCGCGAGGCCTTCACACCGGTGGTCTCCAGCCTCTC +
Preference number: 5 (lower is better)
Translates to: HESTLPGHLWQVQLQ*IYPRGLHTGGLQPL
Trigger: GAGAGGCTGGAGACCACCGGTGTGAAGGCCTCGCGGGTAAATTCACTGCAGCTGGACTTGCCAAAGATGACCTGGGAGAGTGGATTCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616433.4
CDS-3UTR CAA 90 bp GGGCCTCACGGGGCGTGGAAGTGTTCCTTGCAGCATGATTGGTCCTCAGTTCCAGCGTGGAAGTGTTCCTaGCAGCATGATTGGTCCTCA +
Preference number: 5 (lower is better)
Translates to: GPHGAWKCSLQHDWSSVPAWKCS*QHDWSS
Trigger: TGAGGACCAATCATGCTGCAAGGAACACTTCCACGC...TGGAACTGAGGACCAATCATGCTGCAAGGAACACTTCCACGCCCCGTGAGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252453.12
ENST00000587543.1
ENST00000591200.5
ENST00000616433.4
CDS-3UTR CAA 90 bp ACGGGGCGTGGAAGTGTTCCTTGCAGCATGATTGGTCCTCAGTTCCATCCAGGCGCGTGGAAGTGTTCCTaGCAGCATGATTGGTCCTCA +
Preference number: 5 (lower is better)
Translates to: TGRGSVPCSMIGPQFHPGAWKCS*QHDWSS
Trigger: TGAGGACCAATCATGCTGCAAGGAACACTTCCACGC...GCCTGGATGGAACTGAGGACCAATCATGCTGCAAGGAACACTTCCACGCCCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252453.12
ENST00000587543.1
ENST00000591200.5
ENST00000616433.4
CDS-3UTR CAA 90 bp GGGCGTGGAAGTGTTCCTTGCAGCATGATTGGTCCTCAGTTCCATCCAGGCAGATCTCCCAGGTCATCTTaGGCAAGTCCAGCTGCAGTG +
Preference number: 5 (lower is better)
Translates to: GRGSVPCSMIGPQFHPGRSPRSS*ASPAAV
Trigger: CACTGCAGCTGGACTTGCCAAAGATGACCTGGGAGA...TCTGCCTGGATGGAACTGAGGACCAATCATGCTGCAAGGAACACTTCCACGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616433.4
CDS TCA 72 bp CTCCCCAGTGGATCCCACTGCTGCAGCACGGGCGCCTaGGGACCGGCCCCTTCTGTCTCCCAGTGTCTGTGG +
Preference number: 6 (lower is better)
Translates to: LPSGSHCCSTGA*GPAPSVSQCLW
Trigger: CCACAGACACTGGGAGACAGAAGGGGCCGGTCCTCAGGCGCCCGTGCTGCAGCAGTGGGATCCACTGGGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616433.4
CDS GCA 72 bp CGCAGCCGATGCTGCTGTGCCACCATCTCCCGCCTCTaGCGCTGCACGTGGCCTGTGAGGGCCCATAGGATG +
Preference number: 6 (lower is better)
Translates to: RSRCCCATISRL*RCTWPVRAHRM
Trigger: CATCCTATGGGCCCTCACAGGCCACGTGCAGCGGCAGAGGCGGGAGATGGTGGCACAGCAGCATCGGCTGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252453.12
ENST00000587543.1
ENST00000591200.5
ENST00000616433.4
CDS CCA 72 bp TCAGCTCCTCATGCTGTGCCAGTTCTGGGCCGCCCATaGGGGCCGCTGAGGCAGGCCGGGTCACCATTGCCA +
Preference number: 6 (lower is better)
Translates to: SAPHAVPVLGRP*GPLRQAGSPLP
Trigger: TGGCAATGGTGACCCGGCCTGCCTCAGCGGCCCCCATGGGCGGCCCAGAACTGGCACAGCATGAGGAGCTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252453.12
ENST00000616433.4
CDS GCA 72 bp GAGTCTCTCCTGGATCTGTCGCAGCCGATGCTGCTGTaGCACCATCTCCCGCCTCTGCCGCTGCACGTGGCC +
Preference number: 6 (lower is better)
Translates to: ESLLDLSQPMLL*HHLPPLPLHVA
Trigger: GGCCACGTGCAGCGGCAGAGGCGGGAGATGGTGGCACAGCAGCATCGGCTGCGACAGATCCAGGAGAGACTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252453.12
ENST00000587543.1
ENST00000591200.5
ENST00000616433.4
CDS CCA 72 bp CGTCCCTCCGTGGTCCTGTACACACCGTTGAGGGCCTaGCCCAGCTGCAGGGTCCCATGGAAGAGCAGGGTC +
Preference number: 6 (lower is better)
Translates to: RPSVVLYTPLRA*PSCRVPWKSRV
Trigger: GACCCTGCTCTTCCATGGGACCCTGCAGCTGGGCCAGGCCCTCAACGGTGTGTACAGGACCACGGAGGGACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252453.12
ENST00000616433.4
CDS TCA 72 bp CCACCATCTCCCGCCTCTGCCGCTGCACGTGGCCTGTaGGGGCCCATAGGATGTGGCTCTGCTTGTCAGCGT +
Preference number: 6 (lower is better)
Translates to: PPSPASAAARGL*GPIGCGSACQR
Trigger: ACGCTGACAAGCAGAGCCACATCCTATGGGCCCTCACAGGCCACGTGCAGCGGCAGAGGCGGGAGATGGTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252453.12
ENST00000587543.1
ENST00000591200.5
ENST00000616433.4
CDS GCA 72 bp GTGTGGAGTCTCTCCTGGATCTGTCGCAGCCGATGCTaGTGTGCCACCATCTCCCGCCTCTGCCGCTGCACG +
Preference number: 6 (lower is better)
Translates to: VWSLSWICRSRC*CATISRLCRCT
Trigger: CGTGCAGCGGCAGAGGCGGGAGATGGTGGCACAGCAGCATCGGCTGCGACAGATCCAGGAGAGACTCCACAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252453.12
ENST00000587543.1
ENST00000591200.5
ENST00000616433.4
CDS CCA 72 bp TGCTGTGCCACCATCTCCCGCCTCTGCCGCTGCACGTaGCCTGTGAGGGCCCATAGGATGTGGCTCTGCTTG +
Preference number: 6 (lower is better)
Translates to: CCATISRLCRCT*PVRAHRMWLCL
Trigger: CAAGCAGAGCCACATCCTATGGGCCCTCACAGGCCACGTGCAGCGGCAGAGGCGGGAGATGGTGGCACAGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252453.12
ENST00000587543.1
ENST00000591200.5
ENST00000616433.4
CDS TCA 72 bp TTGTCAGCCGTCCCTCCGTGGTCCTGTACACACCGTTaGGGGCCTGGCCCAGCTGCAGGGTCCCATGGAAGA +
Preference number: 6 (lower is better)
Translates to: LSAVPPWSCTHR*GPGPAAGSHGR
Trigger: TCTTCCATGGGACCCTGCAGCTGGGCCAGGCCCTCAACGGTGTGTACAGGACCACGGAGGGACGGCTGACAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252453.12
ENST00000616433.4
CDS GCA 72 bp CAACTTCAGCAGCCGCCAGGGCTCCGTGCGCAACCTTaGTGTGCGAGTGCAGTACATGACAGGCGAGGACCC +
Preference number: 6 (lower is better)
Translates to: QLQQPPGLRAQP*CASAVHDRRGP
Trigger: GGGTCCTCGCCTGTCATGTACTGCACTCGCACAGCAAGGTTGCGCACGGAGCCCTGGCGGCTGCTGAAGTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616433.4
CDS CCA 72 bp ACACCGTTGAGGGCCTGGCCCAGCTGCAGGGTCCCATaGAAGAGCAGGGTCAGCTCCTCATGCTGTGCCAGT +
Preference number: 6 (lower is better)
Translates to: TPLRAWPSCRVP*KSRVSSSCCAS
Trigger: ACTGGCACAGCATGAGGAGCTGACCCTGCTCTTCCATGGGACCCTGCAGCTGGGCCAGGCCCTCAACGGTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252453.12
ENST00000616433.4
CDS CAA 72 bp GCAGAATATCCTCCTCCATCTGAGTCTCCAACAGGCTaGCCCGAAGTTCCTGGGCTGCATCCCGGCCCCGGC +
Preference number: 6 (lower is better)
Translates to: AEYPPPSESPTG*PEVPGLHPGPG
Trigger: GCCGGGGCCGGGATGCAGCCCAGGAACTTCGGGCAAGCCTGTTGGAGACTCAGATGGAGGAGGATATTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252453.12
ENST00000616433.4
CDS GCA 72 bp CAGAATATCCTCCTCCATCTGAGTCTCCAACAGGCTTaGCCGAAGTTCCTGGGCTGCATCCCGGCCCCGGCT +
Preference number: 6 (lower is better)
Translates to: QNILLHLSLQQA*PKFLGCIPAPA
Trigger: AGCCGGGGCCGGGATGCAGCCCAGGAACTTCGGGCAAGCCTGTTGGAGACTCAGATGGAGGAGGATATTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252453.12
ENST00000616433.4
CDS CAA 72 bp TTGTGCGGCCATAGAGACCCAGGCTGTTCCTGGCCTTaGTCAGCCGTCCCTCCGTGGTCCTGTACACACCGT +
Preference number: 6 (lower is better)
Translates to: LCGHRDPGCSWP*SAVPPWSCTHR
Trigger: ACGGTGTGTACAGGACCACGGAGGGACGGCTGACAAAGGCCAGGAACAGCCTGGGTCTCTATGGCCGCACAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252453.12
ENST00000616433.4
CDS CAA 90 bp CAGCTCCTCCCTGCACAGGGGCCTCACGGGGCGTGGAAGTGTTCCTaGCAGCATGATTGGTCCTCAGTTCCATCCAGGCAGATTCAGGCT +
Preference number: 6 (lower is better)
Translates to: QLLPAQGPHGAWKCS*QHDWSSVPSRQIQA
Trigger: AGCCTGAATCTGCCTGGATGGAACTGAGGACCAATCATGCTGCAAGGAACACTTCCACGCCCCGTGAGGCCCCTGTGCAGGGAGGAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252453.12
ENST00000587543.1
ENST00000591200.5
ENST00000616433.4
CDS TCA 72 bp GGGGCCTCACGGGGCGTGGAAGTGTTCCTTGCAGCATaGTTGGTCCTCAGTTCCATCCAGGCAGATTCAGGC +
Preference number: 6 (lower is better)
Translates to: GASRGVEVFLAA*LVLSSIQADSG
Trigger: GCCTGAATCTGCCTGGATGGAACTGAGGACCAATCATGCTGCAAGGAACACTTCCACGCCCCGTGAGGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252453.12
ENST00000587543.1
ENST00000591200.5
ENST00000616433.4
CDS CCA 72 bp GTTCTATTGTGCGGCCATAGAGACCCAGGCTGTTCCTaGCCTTTGTCAGCCGTCCCTCCGTGGTCCTGTACA +
Preference number: 6 (lower is better)
Translates to: VLLCGHRDPGCS*PLSAVPPWSCT
Trigger: TGTACAGGACCACGGAGGGACGGCTGACAAAGGCCAGGAACAGCCTGGGTCTCTATGGCCGCACAATAGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252453.12
ENST00000616433.4
CDS TCA 72 bp ACTCTCCCAGGTCATCTTTGGCAAGTCCAGCTGCAGTaGATTTACCCGCGAGGCCTTCACACCGGTGGTCTC +
Preference number: 6 (lower is better)
Translates to: TLPGHLWQVQLQ*IYPRGLHTGGL
Trigger: GAGACCACCGGTGTGAAGGCCTCGCGGGTAAATTCACTGCAGCTGGACTTGCCAAAGATGACCTGGGAGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616433.4