RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ANGPT1 (Homo sapiens)

Ensembl gene IDs: ENSG00000154188

Ensembl transcript IDs: ENST00000297450.7, ENST00000517746.6, ENST00000518386.5, ENST00000520033.1, ENST00000520052.1, ENST00000520734.5, ENST00000521950.1, ENST00000522400.1

Found 311 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCTTGTGAACTCAAACGGCTCCAGATTCACGGTCAAGAACCTTGGTaGCTTCACATAACTACCACTTATTGCTGGAAGGGAGACAATATT +
Preference number: 1 (lower is better)
Translates to: SCELKRLQIHGQEPW*LHITTTYCWKGDNI
Trigger: AATATTGTCTCCCTTCCAGCAATAAGTGGTAGTTATGTGAAGTCACCAAGGTTCTTGACCGTGAATCTGGAGCCGTTTGAGTTCACAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
3UTR TCA 90 bp AAATGGAGGAAACCATTAAGGCATAGTGGATCAAGTCACCAAGTTTaGAACTGGTATTGCTACCTTGCCAACAACTGTCTCTTTTATGAG +
Preference number: 1 (lower is better)
Translates to: KWRKPLRHSGSSHQV*NWYCYLANNCLFYE
Trigger: CTCATAAAAGAGACAGTTGTTGGCAAGGTAGCAATACCAGTTTCAAACTTGGTGACTTGATCCACTATGCCTTAATGGTTTCCTCCATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
3UTR-3UTR TCA 90 bp GCCCGACAGTCAGTGGAGTTTTCTATAGTCGAGCCACGTGAGCACTGTCACCCCGGTCAAGAACCTTGGTaGCTTCACATAACTACCACT +
Preference number: 2 (lower is better)
Translates to: ARQSVEFSIVEPREHCHPGQEPW*LHITTT
Trigger: AGTGGTAGTTATGTGAAGTCACCAAGGTTCTTGACC...GGGGTGACAGTGCTCACGTGGCTCGACTATAGAAAACTCCACTGACTGTCGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
3UTR-3UTR CCA 90 bp TCGAGCCACGTGAGCACTGTCACCCCAAGTAGAGACTCTTGTGAACTCAAACGGACTACCACTTATTGCTaGAAGGGAGACAATATTGTT +
Preference number: 2 (lower is better)
Translates to: SSHVSTVTPSRDSCELKRTTTYC*KGDNIV
Trigger: AACAATATTGTCTCCCTTCCAGCAATAAGTGGTAGT...CCGTTTGAGTTCACAAGAGTCTCTACTTGGGGTGACAGTGCTCACGTGGCTCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
3UTR-3UTR GCA 90 bp CGACAGTCAGTGGAGTTTTCTATAGTCGAGCCACGTGAGCACTGTCACCCCAAGATAACTACCACTTATTaGTGGAAGGGAGACAATATT +
Preference number: 2 (lower is better)
Translates to: RQSVEFSIVEPREHCHPKITTTY*WKGDNI
Trigger: AATATTGTCTCCCTTCCAGCAATAAGTGGTAGTTAT...CTTGGGGTGACAGTGCTCACGTGGCTCGACTATAGAAAACTCCACTGACTGTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
3UTR CAA 90 bp GGCATAGTGGATCAAGTCACCAAGTTTGAAACTGGTATTGCTACCTaGCCAACAACTGTCTCTTTTATGAGAGGAGGCCCAGTAGCTTTA +
Preference number: 2 (lower is better)
Translates to: GIVDQVTKFETGIAT*PTTVSFMRGGPVAL
Trigger: TAAAGCTACTGGGCCTCCTCTCATAAAAGAGACAGTTGTTGGCAAGGTAGCAATACCAGTTTCAAACTTGGTGACTTGATCCACTATGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
3UTR-3UTR TCA 90 bp AAAATAAGGTCCAGTAGTAGTTTGAAGCACAGCAAGCTCAGCAGTTTCTTCCCTGGTCAAGAACCTTGGTaGCTTCACATAACTACCACT +
Preference number: 2 (lower is better)
Translates to: KIRSSSSLKHSKLSSFFPGQEPW*LHITTT
Trigger: AGTGGTAGTTATGTGAAGTCACCAAGGTTCTTGACC...AGGGAAGAAACTGCTGAGCTTGCTGTGCTTCAAACTACTACTGGACCTTATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
3UTR-3UTR TCA 90 bp CATAGTTCCAAAATAAGGTCCAGTAGTAGTTTGAAGCACAGCAAGCTCAGCAGTGGTCAAGAACCTTGGTaGCTTCACATAACTACCACT +
Preference number: 2 (lower is better)
Translates to: HSSKIRSSSSLKHSKLSSGQEPW*LHITTT
Trigger: AGTGGTAGTTATGTGAAGTCACCAAGGTTCTTGACC...ACTGCTGAGCTTGCTGTGCTTCAAACTACTACTGGACCTTATTTTGGAACTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
3UTR-3UTR CCA 90 bp AGTAGAGACTCTTGTGAACTCAAACGGCTCCAGATTCACGGTCAAGAACCTTGGACTACCACTTATTGCTaGAAGGGAGACAATATTGTT +
Preference number: 2 (lower is better)
Translates to: SRDSCELKRLQIHGQEPWTTTYC*KGDNIV
Trigger: AACAATATTGTCTCCCTTCCAGCAATAAGTGGTAGT...CCAAGGTTCTTGACCGTGAATCTGGAGCCGTTTGAGTTCACAAGAGTCTCTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
3UTR-3UTR GCA 90 bp ACTCTTGTGAACTCAAACGGCTCCAGATTCACGGTCAAGAACCTTGGTGACTTCATAACTACCACTTATTaGTGGAAGGGAGACAATATT +
Preference number: 2 (lower is better)
Translates to: TLVNSNGSRFTVKNLGDFITTTY*WKGDNI
Trigger: AATATTGTCTCCCTTCCAGCAATAAGTGGTAGTTAT...GAAGTCACCAAGGTTCTTGACCGTGAATCTGGAGCCGTTTGAGTTCACAAGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
3UTR CAA 90 bp ACTTCACATAACTACCACTTATTGCTGGAAGGGAGACAATATTGTTaGCTTCTGAAGTTTTCAAACAGTTTCTCACCTGGCAGCTTCTCC +
Preference number: 2 (lower is better)
Translates to: TSHNYHLLLEGRQYC*LLKFSNSFSPGSFS
Trigger: GGAGAAGCTGCCAGGTGAGAAACTGTTTGAAAACTTCAGAAGCAAACAATATTGTCTCCCTTCCAGCAATAAGTGGTAGTTATGTGAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
3UTR-3UTR CCA 90 bp AAAATAAGGTCCAGTAGTAGTTTGAAGCACAGCAAGCTCAGCAGTTTCTTCCCTACTACCACTTATTGCTaGAAGGGAGACAATATTGTT +
Preference number: 2 (lower is better)
Translates to: KIRSSSSLKHSKLSSFFPTTTYC*KGDNIV
Trigger: AACAATATTGTCTCCCTTCCAGCAATAAGTGGTAGT...AGGGAAGAAACTGCTGAGCTTGCTGTGCTTCAAACTACTACTGGACCTTATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
3UTR-3UTR CCA 90 bp TCTGGCTACCATAGTTCCAAAATAAGGTCCAGTAGTAGTTTGAAGCACAGCAAGACTACCACTTATTGCTaGAAGGGAGACAATATTGTT +
Preference number: 2 (lower is better)
Translates to: SGYHSSKIRSSSSLKHSKTTTYC*KGDNIV
Trigger: AACAATATTGTCTCCCTTCCAGCAATAAGTGGTAGT...CTTGCTGTGCTTCAAACTACTACTGGACCTTATTTTGGAACTATGGTAGCCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
3UTR-3UTR CCA 90 bp GAAGTTTTTAGAAGGAGAGGCTTACCTGCTATGAAGAAGCCACCAAGAATAGAACCATTGAGTTATTTATaGCAACTAGCAGTCAGAATT +
Preference number: 2 (lower is better)
Translates to: EVFRRRGLPAMKKPPRIEPLSYL*QLAVRI
Trigger: AATTCTGACTGCTAGTTGCCATAAATAACTCAATGG...TTCTATTCTTGGTGGCTTCTTCATAGCAGGTAAGCCTCTCCTTCTAAAAACTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
3UTR-3UTR CAA 90 bp GCCCGACAGTCAGTGGAGTTTTCTATAGTCGAGCCACGTGAGCACTGTCACCCCTCACGGTCAAGAACCTaGGTGACTTCACATAACTAC +
Preference number: 3 (lower is better)
Translates to: ARQSVEFSIVEPREHCHPSRSRT*VTSHNY
Trigger: GTAGTTATGTGAAGTCACCAAGGTTCTTGACCGTGA...GGGGTGACAGTGCTCACGTGGCTCGACTATAGAAAACTCCACTGACTGTCGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
3UTR TCA 72 bp CCGACAGTCAGTGGAGTTTTCTATAGTCGAGCCACGTaGGCACTGTCACCCCAAGTAGAGACTCTTGTGAAC +
Preference number: 3 (lower is better)
Translates to: PTVSGVFYSRAT*ALSPQVETLVN
Trigger: GTTCACAAGAGTCTCTACTTGGGGTGACAGTGCTCACGTGGCTCGACTATAGAAAACTCCACTGACTGTCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
3UTR-3UTR CAA 90 bp TCGAGCCACGTGAGCACTGTCACCCCAAGTAGAGACTCTTGTGAACTCAAACGGTCACGGTCAAGAACCTaGGTGACTTCACATAACTAC +
Preference number: 3 (lower is better)
Translates to: SSHVSTVTPSRDSCELKRSRSRT*VTSHNY
Trigger: GTAGTTATGTGAAGTCACCAAGGTTCTTGACCGTGA...CCGTTTGAGTTCACAAGAGTCTCTACTTGGGGTGACAGTGCTCACGTGGCTCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
3UTR TCA 72 bp CTCAAACGGCTCCAGATTCACGGTCAAGAACCTTGGTaGCTTCACATAACTACCACTTATTGCTGGAAGGGA +
Preference number: 3 (lower is better)
Translates to: LKRLQIHGQEPW*LHITTTYCWKG
Trigger: TCCCTTCCAGCAATAAGTGGTAGTTATGTGAAGTCACCAAGGTTCTTGACCGTGAATCTGGAGCCGTTTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
3UTR-3UTR CAA 90 bp CCAAGTAGAGACTCTTGTGAACTCAAACGGCTCCAGATTCACGGTCAAGAACCTGGAAGGGAGACAATATaGTTTGCTTCTGAAGTTTTC +
Preference number: 3 (lower is better)
Translates to: PSRDSCELKRLQIHGQEPGRETI*FASEVF
Trigger: GAAAACTTCAGAAGCAAACAATATTGTCTCCCTTCC...AGGTTCTTGACCGTGAATCTGGAGCCGTTTGAGTTCACAAGAGTCTCTACTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
3UTR-3UTR CAA 90 bp GTAGAGACTCTTGTGAACTCAAACGGCTCCAGATTCACGGTCAAGAACCTTGGTGGAAGGGAGACAATATaGTTTGCTTCTGAAGTTTTC +
Preference number: 3 (lower is better)
Translates to: VETLVNSNGSRFTVKNLGGRETI*FASEVF
Trigger: GAAAACTTCAGAAGCAAACAATATTGTCTCCCTTCC...ACCAAGGTTCTTGACCGTGAATCTGGAGCCGTTTGAGTTCACAAGAGTCTCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
3UTR-3UTR CAA 90 bp GTAGAGACTCTTGTGAACTCAAACGGCTCCAGATTCACGGTCAAGAACCTTGGTGGGAGACAATATTGTTaGCTTCTGAAGTTTTCAAAC +
Preference number: 3 (lower is better)
Translates to: VETLVNSNGSRFTVKNLGGRQYC*LLKFSN
Trigger: GTTTGAAAACTTCAGAAGCAAACAATATTGTCTCCC...ACCAAGGTTCTTGACCGTGAATCTGGAGCCGTTTGAGTTCACAAGAGTCTCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
3UTR-3UTR CAA 90 bp GAAGTTTTTAGAAGGAGAGGCTTACCTGCTATGAAGAAGCCACCAAGAATAGAATCACGGTCAAGAACCTaGGTGACTTCACATAACTAC +
Preference number: 3 (lower is better)
Translates to: EVFRRRGLPAMKKPPRIESRSRT*VTSHNY
Trigger: GTAGTTATGTGAAGTCACCAAGGTTCTTGACCGTGA...TTCTATTCTTGGTGGCTTCTTCATAGCAGGTAAGCCTCTCCTTCTAAAAACTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
3UTR-3UTR CAA 90 bp CATAGTTCCAAAATAAGGTCCAGTAGTAGTTTGAAGCACAGCAAGCTCAGCAGTCATAACTACCACTTATaGCTGGAAGGGAGACAATAT +
Preference number: 3 (lower is better)
Translates to: HSSKIRSSSSLKHSKLSSHNYHL*LEGRQY
Trigger: ATATTGTCTCCCTTCCAGCAATAAGTGGTAGTTATG...ACTGCTGAGCTTGCTGTGCTTCAAACTACTACTGGACCTTATTTTGGAACTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
3UTR-3UTR CAA 90 bp AAAATAAGGTCCAGTAGTAGTTTGAAGCACAGCAAGCTCAGCAGTTTCTTCCCTCATAACTACCACTTATaGCTGGAAGGGAGACAATAT +
Preference number: 3 (lower is better)
Translates to: KIRSSSSLKHSKLSSFFPHNYHL*LEGRQY
Trigger: ATATTGTCTCCCTTCCAGCAATAAGTGGTAGTTATG...AGGGAAGAAACTGCTGAGCTTGCTGTGCTTCAAACTACTACTGGACCTTATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
3UTR-3UTR CAA 90 bp AGTTCCAAAATAAGGTCCAGTAGTAGTTTGAAGCACAGCAAGCTCAGCAGTTTCCATAACTACCACTTATaGCTGGAAGGGAGACAATAT +
Preference number: 3 (lower is better)
Translates to: SSKIRSSSSLKHSKLSSFHNYHL*LEGRQY
Trigger: ATATTGTCTCCCTTCCAGCAATAAGTGGTAGTTATG...GAAACTGCTGAGCTTGCTGTGCTTCAAACTACTACTGGACCTTATTTTGGAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
3UTR-3UTR CAA 90 bp AAAATAAGGTCCAGTAGTAGTTTGAAGCACAGCAAGCTCAGCAGTTTCTTCCCTGGGAGACAATATTGTTaGCTTCTGAAGTTTTCAAAC +
Preference number: 3 (lower is better)
Translates to: KIRSSSSLKHSKLSSFFPGRQYC*LLKFSN
Trigger: GTTTGAAAACTTCAGAAGCAAACAATATTGTCTCCC...AGGGAAGAAACTGCTGAGCTTGCTGTGCTTCAAACTACTACTGGACCTTATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
3UTR-3UTR CAA 90 bp AGTTCCAAAATAAGGTCCAGTAGTAGTTTGAAGCACAGCAAGCTCAGCAGTTTCGGGAGACAATATTGTTaGCTTCTGAAGTTTTCAAAC +
Preference number: 3 (lower is better)
Translates to: SSKIRSSSSLKHSKLSSFGRQYC*LLKFSN
Trigger: GTTTGAAAACTTCAGAAGCAAACAATATTGTCTCCC...GAAACTGCTGAGCTTGCTGTGCTTCAAACTACTACTGGACCTTATTTTGGAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR TCA 90 bp TCGAGCCACGTGAGCACTGTCACCCCAAGTAGAGACTCTTGTGAACTCAAACGGGTCTGCTCTGCAGTCTaGGAGAGGAGGCTGGTTCCT +
Preference number: 4 (lower is better)
Translates to: SSHVSTVTPSRDSCELKRVCSAV*ERRLVP
Trigger: AGGAACCAGCCTCCTCTCTCAGACTGCAGAGCAGAC...CCGTTTGAGTTCACAAGAGTCTCTACTTGGGGTGACAGTGCTCACGTGGCTCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS-3UTR TCA 90 bp GCCCGACAGTCAGTGGAGTTTTCTATAGTCGAGCCACGTGAGCACTGTCACCCCTCAAGTCGAGAAGTTTaGTTTAGTACCGCCGGGCGC +
Preference number: 4 (lower is better)
Translates to: ARQSVEFSIVEPREHCHPSSREV*FSTAGR
Trigger: GCGCCCGGCGGTACTAAATCAAACTTCTCGACTTGA...GGGGTGACAGTGCTCACGTGGCTCGACTATAGAAAACTCCACTGACTGTCGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000520052.1
ENST00000520734.5
CDS-3UTR GCA 90 bp GCCCGACAGTCAGTGGAGTTTTCTATAGTCGAGCCACGTGAGCACTGTCACCCCAGCACACTCCTTCCGTaGCTCTCGCAAAACTTGCTC +
Preference number: 4 (lower is better)
Translates to: ARQSVEFSIVEPREHCHPSTLLP*LSQNLL
Trigger: GAGCAAGTTTTGCGAGAGGCACGGAAGGAGTGTGCT...GGGGTGACAGTGCTCACGTGGCTCGACTATAGAAAACTCCACTGACTGTCGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS-3UTR TCA 90 bp CGACAGTCAGTGGAGTTTTCTATAGTCGAGCCACGTGAGCACTGTCACCCCAAGTTGCTGCACCCTATGTaGGTCAGAATGGCAGCGAGG +
Preference number: 4 (lower is better)
Translates to: RQSVEFSIVEPREHCHPKLLHPM*VRMAAR
Trigger: CCTCGCTGCCATTCTGACTCACATAGGGTGCAGCAA...CTTGGGGTGACAGTGCTCACGTGGCTCGACTATAGAAAACTCCACTGACTGTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS-3UTR TCA 90 bp GCCCGACAGTCAGTGGAGTTTTCTATAGTCGAGCCACGTGAGCACTGTCACCCCGGTCCAGTAGTAGTTTaGAGCACAGCAAGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: ARQSVEFSIVEPREHCHPGPVVV*STASSA
Trigger: TGCTGAGCTTGCTGTGCTTCAAACTACTACTGGACC...GGGGTGACAGTGCTCACGTGGCTCGACTATAGAAAACTCCACTGACTGTCGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR TCA 90 bp GCCCGACAGTCAGTGGAGTTTTCTATAGTCGAGCCACGTGAGCACTGTCACCCCCGAGTAACCAAGCCTTaGAGGTTCTCTTTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: ARQSVEFSIVEPREHCHPRVTKP*RFSFSS
Trigger: GGAAGAGAAAGAGAACCTTCAAGGCTTGGTTACTCG...GGGGTGACAGTGCTCACGTGGCTCGACTATAGAAAACTCCACTGACTGTCGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR TCA 90 bp GCCCGACAGTCAGTGGAGTTTTCTATAGTCGAGCCACGTGAGCACTGTCACCCCGAATCTGTCATACTGTaGATAGGCTCGGTTCCCTTC +
Preference number: 4 (lower is better)
Translates to: ARQSVEFSIVEPREHCHPESVIL*IGSVPF
Trigger: GAAGGGAACCGAGCCTATTCACAGTATGACAGATTC...GGGGTGACAGTGCTCACGTGGCTCGACTATAGAAAACTCCACTGACTGTCGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR CCA 90 bp GCCCGACAGTCAGTGGAGTTTTCTATAGTCGAGCCACGTGAGCACTGTCACCCCAGATTGACAAGGTTGTaGACTGTGTCCATCAGCTCC +
Preference number: 4 (lower is better)
Translates to: ARQSVEFSIVEPREHCHPRLTRL*TVSISS
Trigger: GGAGCTGATGGACACAGTCCACAACCTTGTCAATCT...GGGGTGACAGTGCTCACGTGGCTCGACTATAGAAAACTCCACTGACTGTCGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR TCA 90 bp GCACTGTCACCCCAAGTAGAGACTCTTGTGAACTCAAACGGCTCCAGATTCACGTATAGTCGAGCCACGTaGGCACTGTCACCCCAAGTA +
Preference number: 4 (lower is better)
Translates to: ALSPQVETLVNSNGSRFTYSRAT*ALSPQV
Trigger: TACTTGGGGTGACAGTGCTCACGTGGCTCGACTATA...CGTGAATCTGGAGCCGTTTGAGTTCACAAGAGTCTCTACTTGGGGTGACAGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR GCA 90 bp GCACTGTCACCCCAAGTAGAGACTCTTGTGAACTCAAACGGCTCCAGATTCACGCTTTCTGGTCTGCTCTaGAGTCTGAGAGAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: ALSPQVETLVNSNGSRFTLSGLL*SLREEA
Trigger: AGCCTCCTCTCTCAGACTGCAGAGCAGACCAGAAAG...CGTGAATCTGGAGCCGTTTGAGTTCACAAGAGTCTCTACTTGGGGTGACAGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS-3UTR CCA 90 bp TCGAGCCACGTGAGCACTGTCACCCCAAGTAGAGACTCTTGTGAACTCAAACGGTCTCCCACTGTTTTCTaGACTTCGGCGCTGATTGCT +
Preference number: 4 (lower is better)
Translates to: SSHVSTVTPSRDSCELKRSPTVF*TSALIA
Trigger: AGCAATCAGCGCCGAAGTCCAGAAAACAGTGGGAGA...CCGTTTGAGTTCACAAGAGTCTCTACTTGGGGTGACAGTGCTCACGTGGCTCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS-3UTR TCA 90 bp ACTCTTGTGAACTCAAACGGCTCCAGATTCACGGTCAAGAACCTTGGTGACTTCAGCATGGAGCCTGCCTaGGTCAGCTGCGTGTACATA +
Preference number: 4 (lower is better)
Translates to: TLVNSNGSRFTVKNLGDFSMEPA*VSCVYI
Trigger: TATGTACACGCAGCTGACTCAGGCAGGCTCCATGCT...GAAGTCACCAAGGTTCTTGACCGTGAATCTGGAGCCGTTTGAGTTCACAAGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS-3UTR TCA 90 bp ACTCTTGTGAACTCAAACGGCTCCAGATTCACGGTCAAGAACCTTGGTGACTTCTTGCTGCACCCTATGTaGGTCAGAATGGCAGCGAGG +
Preference number: 4 (lower is better)
Translates to: TLVNSNGSRFTVKNLGDFLLHPM*VRMAAR
Trigger: CCTCGCTGCCATTCTGACTCACATAGGGTGCAGCAA...GAAGTCACCAAGGTTCTTGACCGTGAATCTGGAGCCGTTTGAGTTCACAAGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS-3UTR TCA 90 bp TCGAGCCACGTGAGCACTGTCACCCCAAGTAGAGACTCTTGTGAACTCAAACGGCGTGTTCTGGAAGAATaGAAGTGTAGGCACATTGCC +
Preference number: 4 (lower is better)
Translates to: SSHVSTVTPSRDSCELKRRVLEE*KCRHIA
Trigger: GGCAATGTGCCTACACTTTCATTCTTCCAGAACACG...CCGTTTGAGTTCACAAGAGTCTCTACTTGGGGTGACAGTGCTCACGTGGCTCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS-3UTR TCA 90 bp CACGTGAGCACTGTCACCCCAAGTAGAGACTCTTGTGAACTCAAACGGCTCCAGCGAGTAACCAAGCCTTaGAGGTTCTCTTTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: HVSTVTPSRDSCELKRLQRVTKP*RFSFSS
Trigger: GGAAGAGAAAGAGAACCTTCAAGGCTTGGTTACTCG...CTGGAGCCGTTTGAGTTCACAAGAGTCTCTACTTGGGGTGACAGTGCTCACGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR TCA 90 bp GCACTGTCACCCCAAGTAGAGACTCTTGTGAACTCAAACGGCTCCAGATTCACGTCCAGTTGCTGCTTCTaGAGGACACTGTTGTTGGTG +
Preference number: 4 (lower is better)
Translates to: ALSPQVETLVNSNGSRFTSSCCF*RTLLLV
Trigger: CACCAACAACAGTGTCCTTCAGAAGCAGCAACTGGA...CGTGAATCTGGAGCCGTTTGAGTTCACAAGAGTCTCTACTTGGGGTGACAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR TCA 90 bp CGACAGTCAGTGGAGTTTTCTATAGTCGAGCCACGTGAGCACTGTCACCCCAAGGAATCTGTCATACTGTaGATAGGCTCGGTTCCCTTC +
Preference number: 4 (lower is better)
Translates to: RQSVEFSIVEPREHCHPKESVIL*IGSVPF
Trigger: GAAGGGAACCGAGCCTATTCACAGTATGACAGATTC...CTTGGGGTGACAGTGCTCACGTGGCTCGACTATAGAAAACTCCACTGACTGTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR GCA 90 bp GCACTGTCACCCCAAGTAGAGACTCTTGTGAACTCAAACGGCTCCAGATTCACGTTCGGCGCTGATTGCTaGACCCTATGTGAGTCAGAA +
Preference number: 4 (lower is better)
Translates to: ALSPQVETLVNSNGSRFTFGADC*TLCESE
Trigger: TTCTGACTCACATAGGGTGCAGCAATCAGCGCCGAA...CGTGAATCTGGAGCCGTTTGAGTTCACAAGAGTCTCTACTTGGGGTGACAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS-3UTR CCA 90 bp ACTCTTGTGAACTCAAACGGCTCCAGATTCACGGTCAAGAACCTTGGTGACTTCTGTGACCGTTCAGCATaGAGCCTGCCTGAGTCAGCT +
Preference number: 4 (lower is better)
Translates to: TLVNSNGSRFTVKNLGDFCDRSA*SLPESA
Trigger: AGCTGACTCAGGCAGGCTCCATGCTGAACGGTCACA...GAAGTCACCAAGGTTCTTGACCGTGAATCTGGAGCCGTTTGAGTTCACAAGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS-3UTR CCA 90 bp CGACAGTCAGTGGAGTTTTCTATAGTCGAGCCACGTGAGCACTGTCACCCCAAGAGATTGACAAGGTTGTaGACTGTGTCCATCAGCTCC +
Preference number: 4 (lower is better)
Translates to: RQSVEFSIVEPREHCHPKRLTRL*TVSISS
Trigger: GGAGCTGATGGACACAGTCCACAACCTTGTCAATCT...CTTGGGGTGACAGTGCTCACGTGGCTCGACTATAGAAAACTCCACTGACTGTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR TCA 90 bp CCAGATTCACGGTCAAGAACCTTGGTGACTTCACATAACTACCACTTATTGCTGGTCTGCTCTGCAGTCTaGGAGAGGAGGCTGGTTCCT +
Preference number: 4 (lower is better)
Translates to: PDSRSRTLVTSHNYHLLLVCSAV*ERRLVP
Trigger: AGGAACCAGCCTCCTCTCTCAGACTGCAGAGCAGAC...CAGCAATAAGTGGTAGTTATGTGAAGTCACCAAGGTTCTTGACCGTGAATCTGG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS-3UTR TCA 90 bp CACGTGAGCACTGTCACCCCAAGTAGAGACTCTTGTGAACTCAAACGGCTCCAGTCCAACCTCCCCCATTaGCATCCATATTGCAAAACA +
Preference number: 4 (lower is better)
Translates to: HVSTVTPSRDSCELKRLQSNLPH*HPYCKT
Trigger: TGTTTTGCAATATGGATGTCAATGGGGGAGGTTGGA...CTGGAGCCGTTTGAGTTCACAAGAGTCTCTACTTGGGGTGACAGTGCTCACGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR TCA 90 bp CGACAGTCAGTGGAGTTTTCTATAGTCGAGCCACGTGAGCACTGTCACCCCAAGCCTGCTGTCCCAGTGTaGCCTTTTAAATACAACCTA +
Preference number: 4 (lower is better)
Translates to: RQSVEFSIVEPREHCHPKPAVPV*PFKYNL
Trigger: TAGGTTGTATTTAAAAGGTCACACTGGGACAGCAGG...CTTGGGGTGACAGTGCTCACGTGGCTCGACTATAGAAAACTCCACTGACTGTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR TCA 90 bp GCACTGTCACCCCAAGTAGAGACTCTTGTGAACTCAAACGGCTCCAGATTCACGAGTAACTGGGCCCTTTaGAGTAGTGCCACTTTATCC +
Preference number: 4 (lower is better)
Translates to: ALSPQVETLVNSNGSRFTSNWAL*SSATLS
Trigger: GGATAAAGTGGCACTACTTCAAAGGGCCCAGTTACT...CGTGAATCTGGAGCCGTTTGAGTTCACAAGAGTCTCTACTTGGGGTGACAGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR TCA 90 bp GTAGAGACTCTTGTGAACTCAAACGGCTCCAGATTCACGGTCAAGAACCTTGGTTATAGTCGAGCCACGTaGGCACTGTCACCCCAAGTA +
Preference number: 4 (lower is better)
Translates to: VETLVNSNGSRFTVKNLGYSRAT*ALSPQV
Trigger: TACTTGGGGTGACAGTGCTCACGTGGCTCGACTATA...ACCAAGGTTCTTGACCGTGAATCTGGAGCCGTTTGAGTTCACAAGAGTCTCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR TCA 90 bp CCAAGTAGAGACTCTTGTGAACTCAAACGGCTCCAGATTCACGGTCAAGAACCTTATAGTCGAGCCACGTaGGCACTGTCACCCCAAGTA +
Preference number: 4 (lower is better)
Translates to: PSRDSCELKRLQIHGQEPYSRAT*ALSPQV
Trigger: TACTTGGGGTGACAGTGCTCACGTGGCTCGACTATA...AGGTTCTTGACCGTGAATCTGGAGCCGTTTGAGTTCACAAGAGTCTCTACTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR TCA 90 bp ACTCTTGTGAACTCAAACGGCTCCAGATTCACGGTCAAGAACCTTGGTGACTTCTATAGTCGAGCCACGTaGGCACTGTCACCCCAAGTA +
Preference number: 4 (lower is better)
Translates to: TLVNSNGSRFTVKNLGDFYSRAT*ALSPQV
Trigger: TACTTGGGGTGACAGTGCTCACGTGGCTCGACTATA...GAAGTCACCAAGGTTCTTGACCGTGAATCTGGAGCCGTTTGAGTTCACAAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR GCA 90 bp GCACTGTCACCCCAAGTAGAGACTCTTGTGAACTCAAACGGCTCCAGATTCACGAAACTGTCATTGTACTaGCAGCACACTCCTTCCGTG +
Preference number: 4 (lower is better)
Translates to: ALSPQVETLVNSNGSRFTKLSLY*QHTPSV
Trigger: CACGGAAGGAGTGTGCTGGCAGTACAATGACAGTTT...CGTGAATCTGGAGCCGTTTGAGTTCACAAGAGTCTCTACTTGGGGTGACAGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS-3UTR GCA 90 bp CGACAGTCAGTGGAGTTTTCTATAGTCGAGCCACGTGAGCACTGTCACCCCAAGTACTCTCACGACAGTTaGCATCGTGTTCTGGAAGAA +
Preference number: 4 (lower is better)
Translates to: RQSVEFSIVEPREHCHPKYSHDS*HRVLEE
Trigger: TTCTTCCAGAACACGATGGCAACTGTCGTGAGAGTA...CTTGGGGTGACAGTGCTCACGTGGCTCGACTATAGAAAACTCCACTGACTGTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS-3UTR GCA 90 bp GCACTGTCACCCCAAGTAGAGACTCTTGTGAACTCAAACGGCTCCAGATTCACGAAGGAGAGGCTTACCTaGTATGAAGAAGCCACCAAG +
Preference number: 4 (lower is better)
Translates to: ALSPQVETLVNSNGSRFTKERLT*YEEATK
Trigger: CTTGGTGGCTTCTTCATAGCAGGTAAGCCTCTCCTT...CGTGAATCTGGAGCCGTTTGAGTTCACAAGAGTCTCTACTTGGGGTGACAGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS-3UTR CCA 90 bp GTAGAGACTCTTGTGAACTCAAACGGCTCCAGATTCACGGTCAAGAACCTTGGTACATCCAAGCCAAGCTaGAAGCAGGCAGCCTTTCAC +
Preference number: 4 (lower is better)
Translates to: VETLVNSNGSRFTVKNLGTSKPS*KQAAFH
Trigger: GTGAAAGGCTGCCTGCTTCCAGCTTGGCTTGGATGT...ACCAAGGTTCTTGACCGTGAATCTGGAGCCGTTTGAGTTCACAAGAGTCTCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297450.7
CDS-3UTR CCA 90 bp CACGTGAGCACTGTCACCCCAAGTAGAGACTCTTGTGAACTCAAACGGCTCCAGGTTGCCATCGTGTTCTaGAAGAATGAAAGTGTAGGC +
Preference number: 4 (lower is better)
Translates to: HVSTVTPSRDSCELKRLQVAIVF*KNESVG
Trigger: GCCTACACTTTCATTCTTCCAGAACACGATGGCAAC...CTGGAGCCGTTTGAGTTCACAAGAGTCTCTACTTGGGGTGACAGTGCTCACGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS-3UTR TCA 90 bp TCGAGCCACGTGAGCACTGTCACCCCAAGTAGAGACTCTTGTGAACTCAAACGGTTTCACAAGATGACTTaGCAGGAATGCATGAGTGTG +
Preference number: 4 (lower is better)
Translates to: SSHVSTVTPSRDSCELKRFHKMT*QECMSV
Trigger: CACACTCATGCATTCCTGTCAAGTCATCTTGTGAAA...CCGTTTGAGTTCACAAGAGTCTCTACTTGGGGTGACAGTGCTCACGTGGCTCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297450.7
CDS-3UTR TCA 90 bp GTAGAGACTCTTGTGAACTCAAACGGCTCCAGATTCACGGTCAAGAACCTTGGTTCCAGTTGCTGCTTCTaGAGGACACTGTTGTTGGTG +
Preference number: 4 (lower is better)
Translates to: VETLVNSNGSRFTVKNLGSSCCF*RTLLLV
Trigger: CACCAACAACAGTGTCCTTCAGAAGCAGCAACTGGA...ACCAAGGTTCTTGACCGTGAATCTGGAGCCGTTTGAGTTCACAAGAGTCTCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR TCA 90 bp ACTCTTGTGAACTCAAACGGCTCCAGATTCACGGTCAAGAACCTTGGTGACTTCGGTCCAGTAGTAGTTTaGAGCACAGCAAGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: TLVNSNGSRFTVKNLGDFGPVVV*STASSA
Trigger: TGCTGAGCTTGCTGTGCTTCAAACTACTACTGGACC...GAAGTCACCAAGGTTCTTGACCGTGAATCTGGAGCCGTTTGAGTTCACAAGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR GCA 90 bp AGTAGAGACTCTTGTGAACTCAAACGGCTCCAGATTCACGGTCAAGAACCTTGGGCTGCTCTGTTTTCCTaGTGTCCCAGTGTGACCTTT +
Preference number: 4 (lower is better)
Translates to: SRDSCELKRLQIHGQEPWAALFS*CPSVTF
Trigger: AAAGGTCACACTGGGACAGCAGGAAAACAGAGCAGC...CCAAGGTTCTTGACCGTGAATCTGGAGCCGTTTGAGTTCACAAGAGTCTCTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR CCA 90 bp AGTAGAGACTCTTGTGAACTCAAACGGCTCCAGATTCACGGTCAAGAACCTTGGTCTCCCACTGTTTTCTaGACTTCGGCGCTGATTGCT +
Preference number: 4 (lower is better)
Translates to: SRDSCELKRLQIHGQEPWSPTVF*TSALIA
Trigger: AGCAATCAGCGCCGAAGTCCAGAAAACAGTGGGAGA...CCAAGGTTCTTGACCGTGAATCTGGAGCCGTTTGAGTTCACAAGAGTCTCTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS-3UTR TCA 90 bp GTAGAGACTCTTGTGAACTCAAACGGCTCCAGATTCACGGTCAAGAACCTTGGTCGAGTAACCAAGCCTTaGAGGTTCTCTTTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: VETLVNSNGSRFTVKNLGRVTKP*RFSFSS
Trigger: GGAAGAGAAAGAGAACCTTCAAGGCTTGGTTACTCG...ACCAAGGTTCTTGACCGTGAATCTGGAGCCGTTTGAGTTCACAAGAGTCTCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR TCA 90 bp AGTAGAGACTCTTGTGAACTCAAACGGCTCCAGATTCACGGTCAAGAACCTTGGAGTAACTGGGCCCTTTaGAGTAGTGCCACTTTATCC +
Preference number: 4 (lower is better)
Translates to: SRDSCELKRLQIHGQEPWSNWAL*SSATLS
Trigger: GGATAAAGTGGCACTACTTCAAAGGGCCCAGTTACT...CCAAGGTTCTTGACCGTGAATCTGGAGCCGTTTGAGTTCACAAGAGTCTCTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR GCA 90 bp AGTTCCAAAATAAGGTCCAGTAGTAGTTTGAAGCACAGCAAGCTCAGCAGTTTCGTTCAGCATGGAGCCTaGCTGAGTCAGCTGCGTGTA +
Preference number: 4 (lower is better)
Translates to: SSKIRSSSSLKHSKLSSFVQHGA*LSQLRV
Trigger: TACACGCAGCTGACTCAGGCAGGCTCCATGCTGAAC...GAAACTGCTGAGCTTGCTGTGCTTCAAACTACTACTGGACCTTATTTTGGAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS-3UTR GCA 90 bp TCTGGCTACCATAGTTCCAAAATAAGGTCCAGTAGTAGTTTGAAGCACAGCAAGGTTCAGCATGGAGCCTaGCTGAGTCAGCTGCGTGTA +
Preference number: 4 (lower is better)
Translates to: SGYHSSKIRSSSSLKHSKVQHGA*LSQLRV
Trigger: TACACGCAGCTGACTCAGGCAGGCTCCATGCTGAAC...CTTGCTGTGCTTCAAACTACTACTGGACCTTATTTTGGAACTATGGTAGCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS-3UTR GCA 90 bp ACTCTTGTGAACTCAAACGGCTCCAGATTCACGGTCAAGAACCTTGGTGACTTCTGTGGAGCATCTCTCTaGAGAGCGTTTGTGTTGTAC +
Preference number: 4 (lower is better)
Translates to: TLVNSNGSRFTVKNLGDFCGASL*RAFVLY
Trigger: GTACAACACAAACGCTCTGCAGAGAGATGCTCCACA...GAAGTCACCAAGGTTCTTGACCGTGAATCTGGAGCCGTTTGAGTTCACAAGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS-3UTR GCA 90 bp CGACAGTCAGTGGAGTTTTCTATAGTCGAGCCACGTGAGCACTGTCACCCCAAGCTGGTATTGCTACCTTaGCAACAACTGTCTCTTTTA +
Preference number: 4 (lower is better)
Translates to: RQSVEFSIVEPREHCHPKLVLLP*QQLSLL
Trigger: TAAAAGAGACAGTTGTTGGCAAGGTAGCAATACCAG...CTTGGGGTGACAGTGCTCACGTGGCTCGACTATAGAAAACTCCACTGACTGTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS-3UTR CCA 90 bp AGTTCCAAAATAAGGTCCAGTAGTAGTTTGAAGCACAGCAAGCTCAGCAGTTTCTGTGACCGTTCAGCATaGAGCCTGCCTGAGTCAGCT +
Preference number: 4 (lower is better)
Translates to: SSKIRSSSSLKHSKLSSFCDRSA*SLPESA
Trigger: AGCTGACTCAGGCAGGCTCCATGCTGAACGGTCACA...GAAACTGCTGAGCTTGCTGTGCTTCAAACTACTACTGGACCTTATTTTGGAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS-3UTR CCA 90 bp CCAAGTAGAGACTCTTGTGAACTCAAACGGCTCCAGATTCACGGTCAAGAACCTCTATGTGAGTCAGAATaGCAGCGAGGAAAGCAAAGG +
Preference number: 4 (lower is better)
Translates to: PSRDSCELKRLQIHGQEPLCESE*QRGKQR
Trigger: CCTTTGCTTTCCTCGCTGCCATTCTGACTCACATAG...AGGTTCTTGACCGTGAATCTGGAGCCGTTTGAGTTCACAAGAGTCTCTACTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS-3UTR CCA 90 bp ACTCTTGTGAACTCAAACGGCTCCAGATTCACGGTCAAGAACCTTGGTGACTTCGCGTTTGTGTTGTACTaGTCTGTCGTACTCTCACGA +
Preference number: 4 (lower is better)
Translates to: TLVNSNGSRFTVKNLGDFAFVLY*SVVLSR
Trigger: TCGTGAGAGTACGACAGACCAGTACAACACAAACGC...GAAGTCACCAAGGTTCTTGACCGTGAATCTGGAGCCGTTTGAGTTCACAAGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS-3UTR TCA 90 bp AGAACCTTGGTGACTTCACATAACTACCACTTATTGCTGGAAGGGAGACAATATAGCATGGAGCCTGCCTaGGTCAGCTGCGTGTACATA +
Preference number: 4 (lower is better)
Translates to: RTLVTSHNYHLLLEGRQYSMEPA*VSCVYI
Trigger: TATGTACACGCAGCTGACTCAGGCAGGCTCCATGCT...ATATTGTCTCCCTTCCAGCAATAAGTGGTAGTTATGTGAAGTCACCAAGGTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS-3UTR TCA 90 bp AGTTCCAAAATAAGGTCCAGTAGTAGTTTGAAGCACAGCAAGCTCAGCAGTTTCTGTTTCCTCTCTGTGTaGCCGTTCAGCATGGAGCCT +
Preference number: 4 (lower is better)
Translates to: SSKIRSSSSLKHSKLSSFCFLSV*PFSMEP
Trigger: AGGCTCCATGCTGAACGGTCACACAGAGAGGAAACA...GAAACTGCTGAGCTTGCTGTGCTTCAAACTACTACTGGACCTTATTTTGGAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS-3UTR TCA 90 bp GTAGAGACTCTTGTGAACTCAAACGGCTCCAGATTCACGGTCAAGAACCTTGGTTCCAACCTCCCCCATTaGCATCCATATTGCAAAACA +
Preference number: 4 (lower is better)
Translates to: VETLVNSNGSRFTVKNLGSNLPH*HPYCKT
Trigger: TGTTTTGCAATATGGATGTCAATGGGGGAGGTTGGA...ACCAAGGTTCTTGACCGTGAATCTGGAGCCGTTTGAGTTCACAAGAGTCTCTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR TCA 90 bp ACTCTTGTGAACTCAAACGGCTCCAGATTCACGGTCAAGAACCTTGGTGACTTCCCTGCTGTCCCAGTGTaGCCTTTTAAATACAACCTA +
Preference number: 4 (lower is better)
Translates to: TLVNSNGSRFTVKNLGDFPAVPV*PFKYNL
Trigger: TAGGTTGTATTTAAAAGGTCACACTGGGACAGCAGG...GAAGTCACCAAGGTTCTTGACCGTGAATCTGGAGCCGTTTGAGTTCACAAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR TCA 90 bp AGTAGAGACTCTTGTGAACTCAAACGGCTCCAGATTCACGGTCAAGAACCTTGGATCCTCCTGTTAACATaGGGGCACATTTGCACATAC +
Preference number: 4 (lower is better)
Translates to: SRDSCELKRLQIHGQEPWILLLT*GHICTY
Trigger: GTATGTGCAAATGTGCCCTCATGTTAACAGGAGGAT...CCAAGGTTCTTGACCGTGAATCTGGAGCCGTTTGAGTTCACAAGAGTCTCTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR TCA 90 bp ACTCTTGTGAACTCAAACGGCTCCAGATTCACGGTCAAGAACCTTGGTGACTTCGGTCAAGAACCTTGGTaGCTTCACATAACTACCACT +
Preference number: 4 (lower is better)
Translates to: TLVNSNGSRFTVKNLGDFGQEPW*LHITTT
Trigger: AGTGGTAGTTATGTGAAGTCACCAAGGTTCTTGACC...GAAGTCACCAAGGTTCTTGACCGTGAATCTGGAGCCGTTTGAGTTCACAAGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR TCA 90 bp TCTGGCTACCATAGTTCCAAAATAAGGTCCAGTAGTAGTTTGAAGCACAGCAAGTCAAGTCGAGAAGTTTaGTTTAGTACCGCCGGGCGC +
Preference number: 4 (lower is better)
Translates to: SGYHSSKIRSSSSLKHSKSSREV*FSTAGR
Trigger: GCGCCCGGCGGTACTAAATCAAACTTCTCGACTTGA...CTTGCTGTGCTTCAAACTACTACTGGACCTTATTTTGGAACTATGGTAGCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520052.1
ENST00000520734.5
CDS-3UTR GCA 90 bp AGTTTCTCACCTGGCAGCTTCTCCGGATTTCTTTGTTGCTTTCATAATCGCTTCTTCGGCGCTGATTGCTaGACCCTATGTGAGTCAGAA +
Preference number: 4 (lower is better)
Translates to: SFSPGSFSGFLCCFHNRFFGADC*TLCESE
Trigger: TTCTGACTCACATAGGGTGCAGCAATCAGCGCCGAA...GAAGCGATTATGAAAGCAACAAAGAAATCCGGAGAAGCTGCCAGGTGAGAAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS-3UTR GCA 90 bp TCTGGCTACCATAGTTCCAAAATAAGGTCCAGTAGTAGTTTGAAGCACAGCAAGGACTTCGGCGCTGATTaGTGCACCCTATGTGAGTCA +
Preference number: 4 (lower is better)
Translates to: SGYHSSKIRSSSSLKHSKDFGAD*CTLCES
Trigger: TGACTCACATAGGGTGCAGCAATCAGCGCCGAAGTC...CTTGCTGTGCTTCAAACTACTACTGGACCTTATTTTGGAACTATGGTAGCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS-3UTR GCA 90 bp TCGAGCCACGTGAGCACTGTCACCCCAAGTAGAGACTCTTGTGAACTCAAACGGCTGCTCCAGAGTACTTaGTTTTACTTCAACTTAACA +
Preference number: 4 (lower is better)
Translates to: SSHVSTVTPSRDSCELKRLLQST*FYFNLT
Trigger: TGTTAAGTTGAAGTAAAAGCAAGTACTCTGGAGCAG...CCGTTTGAGTTCACAAGAGTCTCTACTTGGGGTGACAGTGCTCACGTGGCTCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS-3UTR CCA 90 bp GTAGAGACTCTTGTGAACTCAAACGGCTCCAGATTCACGGTCAAGAACCTTGGTGTTGCCATCGTGTTCTaGAAGAATGAAAGTGTAGGC +
Preference number: 4 (lower is better)
Translates to: VETLVNSNGSRFTVKNLGVAIVF*KNESVG
Trigger: GCCTACACTTTCATTCTTCCAGAACACGATGGCAAC...ACCAAGGTTCTTGACCGTGAATCTGGAGCCGTTTGAGTTCACAAGAGTCTCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS-3UTR CCA 90 bp ACCTTGGTGACTTCACATAACTACCACTTATTGCTGGAAGGGAGACAATATTGTATCCGGTTCCACGTGTaGAGCATCTCTCTGCAGAGC +
Preference number: 4 (lower is better)
Translates to: TLVTSHNYHLLLEGRQYCIRFHV*SISLQS
Trigger: GCTCTGCAGAGAGATGCTCCACACGTGGAACCGGAT...ACAATATTGTCTCCCTTCCAGCAATAAGTGGTAGTTATGTGAAGTCACCAAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS-3UTR TCA 90 bp AAAATAAGGTCCAGTAGTAGTTTGAAGCACAGCAAGCTCAGCAGTTTCTTCCCTTCCAGTTGCTGCTTCTaGAGGACACTGTTGTTGGTG +
Preference number: 4 (lower is better)
Translates to: KIRSSSSLKHSKLSSFFPSSCCF*RTLLLV
Trigger: CACCAACAACAGTGTCCTTCAGAAGCAGCAACTGGA...AGGGAAGAAACTGCTGAGCTTGCTGTGCTTCAAACTACTACTGGACCTTATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR TCA 90 bp AGTTCCAAAATAAGGTCCAGTAGTAGTTTGAAGCACAGCAAGCTCAGCAGTTTCTCCAGTTGCTGCTTCTaGAGGACACTGTTGTTGGTG +
Preference number: 4 (lower is better)
Translates to: SSKIRSSSSLKHSKLSSFSSCCF*RTLLLV
Trigger: CACCAACAACAGTGTCCTTCAGAAGCAGCAACTGGA...GAAACTGCTGAGCTTGCTGTGCTTCAAACTACTACTGGACCTTATTTTGGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR TCA 90 bp CCAGATTCACGGTCAAGAACCTTGGTGACTTCACATAACTACCACTTATTGCTGAGTAACTGGGCCCTTTaGAGTAGTGCCACTTTATCC +
Preference number: 4 (lower is better)
Translates to: PDSRSRTLVTSHNYHLLLSNWAL*SSATLS
Trigger: GGATAAAGTGGCACTACTTCAAAGGGCCCAGTTACT...CAGCAATAAGTGGTAGTTATGTGAAGTCACCAAGGTTCTTGACCGTGAATCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR TCA 90 bp CATAGTTCCAAAATAAGGTCCAGTAGTAGTTTGAAGCACAGCAAGCTCAGCAGTGGTCCAGTAGTAGTTTaGAGCACAGCAAGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: HSSKIRSSSSLKHSKLSSGPVVV*STASSA
Trigger: TGCTGAGCTTGCTGTGCTTCAAACTACTACTGGACC...ACTGCTGAGCTTGCTGTGCTTCAAACTACTACTGGACCTTATTTTGGAACTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR TCA 90 bp AGTTCCAAAATAAGGTCCAGTAGTAGTTTGAAGCACAGCAAGCTCAGCAGTTTCGGTCCAGTAGTAGTTTaGAGCACAGCAAGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: SSKIRSSSSLKHSKLSSFGPVVV*STASSA
Trigger: TGCTGAGCTTGCTGTGCTTCAAACTACTACTGGACC...GAAACTGCTGAGCTTGCTGTGCTTCAAACTACTACTGGACCTTATTTTGGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR GCA 90 bp CCAAGTAGAGACTCTTGTGAACTCAAACGGCTCCAGATTCACGGTCAAGAACCTTTCCTCTACCCTATCTaGTGCAGATCTGCTATTTTC +
Preference number: 4 (lower is better)
Translates to: PSRDSCELKRLQIHGQEPFLYPI*CRSAIF
Trigger: GAAAATAGCAGATCTGCAGCAGATAGGGTAGAGGAA...AGGTTCTTGACCGTGAATCTGGAGCCGTTTGAGTTCACAAGAGTCTCTACTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297450.7
CDS-3UTR GCA 90 bp GAAGTTTTTAGAAGGAGAGGCTTACCTGCTATGAAGAAGCCACCAAGAATAGAACTTTCTGGTCTGCTCTaGAGTCTGAGAGAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: EVFRRRGLPAMKKPPRIELSGLL*SLREEA
Trigger: AGCCTCCTCTCTCAGACTGCAGAGCAGACCAGAAAG...TTCTATTCTTGGTGGCTTCTTCATAGCAGGTAAGCCTCTCCTTCTAAAAACTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS-3UTR GCA 90 bp AGTTCCAAAATAAGGTCCAGTAGTAGTTTGAAGCACAGCAAGCTCAGCAGTTTCGCTGCTCTGTTTTCCTaGTGTCCCAGTGTGACCTTT +
Preference number: 4 (lower is better)
Translates to: SSKIRSSSSLKHSKLSSFAALFS*CPSVTF
Trigger: AAAGGTCACACTGGGACAGCAGGAAAACAGAGCAGC...GAAACTGCTGAGCTTGCTGTGCTTCAAACTACTACTGGACCTTATTTTGGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR GCA 90 bp CGACAGTCAGTGGAGTTTTCTATAGTCGAGCCACGTGAGCACTGTCACCCCAAGTACTGTAAAATGAACTaGTCCAGAGTACTTGCTTTT +
Preference number: 4 (lower is better)
Translates to: RQSVEFSIVEPREHCHPKYCKMN*SRVLAF
Trigger: AAAAGCAAGTACTCTGGAGCAGTTCATTTTACAGTA...CTTGGGGTGACAGTGCTCACGTGGCTCGACTATAGAAAACTCCACTGACTGTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS-3UTR CCA 90 bp TACCATAGTTCCAAAATAAGGTCCAGTAGTAGTTTGAAGCACAGCAAGCTCAGCGCATTCTGCTGTATCTaGGCCATCTCCGACTTCATG +
Preference number: 4 (lower is better)
Translates to: YHSSKIRSSSSLKHSKLSAFCCI*AISDFM
Trigger: CATGAAGTCGGAGATGGCCCAGATACAGCAGAATGC...GCTGAGCTTGCTGTGCTTCAAACTACTACTGGACCTTATTTTGGAACTATGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS-3UTR CCA 90 bp TTTCAAACAGTTTCTCACCTGGCAGCTTCTCCGGATTTCTTTGTTGCTTTCATATCTGAGAGAGGAGGCTaGTTCCTATCTCCAGCATGG +
Preference number: 4 (lower is better)
Translates to: FQTVSHLAASPDFFVAFISERGG*FLSPAW
Trigger: CCATGCTGGAGATAGGAACCAGCCTCCTCTCTCAGA...TATGAAAGCAACAAAGAAATCCGGAGAAGCTGCCAGGTGAGAAACTGTTTGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS-3UTR CCA 90 bp AGAACCTTGGTGACTTCACATAACTACCACTTATTGCTGGAAGGGAGACAATATTCTGAGAGAGGAGGCTaGTTCCTATCTCCAGCATGG +
Preference number: 4 (lower is better)
Translates to: RTLVTSHNYHLLLEGRQYSERGG*FLSPAW
Trigger: CCATGCTGGAGATAGGAACCAGCCTCCTCTCTCAGA...ATATTGTCTCCCTTCCAGCAATAAGTGGTAGTTATGTGAAGTCACCAAGGTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS-3UTR CCA 90 bp AGTTCCAAAATAAGGTCCAGTAGTAGTTTGAAGCACAGCAAGCTCAGCAGTTTCCATCTGTCAGCTTTCTaGTCTGCTCTGCAGTCTGAG +
Preference number: 4 (lower is better)
Translates to: SSKIRSSSSLKHSKLSSFHLSAF*SALQSE
Trigger: CTCAGACTGCAGAGCAGACCAGAAAGCTGACAGATG...GAAACTGCTGAGCTTGCTGTGCTTCAAACTACTACTGGACCTTATTTTGGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS-3UTR CCA 90 bp CATAGTTCCAAAATAAGGTCCAGTAGTAGTTTGAAGCACAGCAAGCTCAGCAGTCATCTGTCAGCTTTCTaGTCTGCTCTGCAGTCTGAG +
Preference number: 4 (lower is better)
Translates to: HSSKIRSSSSLKHSKLSSHLSAF*SALQSE
Trigger: CTCAGACTGCAGAGCAGACCAGAAAGCTGACAGATG...ACTGCTGAGCTTGCTGTGCTTCAAACTACTACTGGACCTTATTTTGGAACTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS-3UTR CCA 90 bp GTAGAGACTCTTGTGAACTCAAACGGCTCCAGATTCACGGTCAAGAACCTTGGTACATTCCATTTAGATTaGAGGGGCCACAAGCATCAA +
Preference number: 4 (lower is better)
Translates to: VETLVNSNGSRFTVKNLGTFHLD*RGHKHQ
Trigger: TTGATGCTTGTGGCCCCTCCAATCTAAATGGAATGT...ACCAAGGTTCTTGACCGTGAATCTGGAGCCGTTTGAGTTCACAAGAGTCTCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR CCA 90 bp CGACAGTCAGTGGAGTTTTCTATAGTCGAGCCACGTGAGCACTGTCACCCCAAGCCATTGAGTTATTTATaGCAACTAGCAGTCAGAATT +
Preference number: 4 (lower is better)
Translates to: RQSVEFSIVEPREHCHPKPLSYL*QLAVRI
Trigger: AATTCTGACTGCTAGTTGCCATAAATAACTCAATGG...CTTGGGGTGACAGTGCTCACGTGGCTCGACTATAGAAAACTCCACTGACTGTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS-3UTR TCA 90 bp AAAATAAGGTCCAGTAGTAGTTTGAAGCACAGCAAGCTCAGCAGTTTCTTCCCTCTTGACAGGAATGCATaGGTGTGCCCCTATACTAAG +
Preference number: 4 (lower is better)
Translates to: KIRSSSSLKHSKLSSFFPLDRNA*VCPYTK
Trigger: CTTAGTATAGGGGCACACTCATGCATTCCTGTCAAG...AGGGAAGAAACTGCTGAGCTTGCTGTGCTTCAAACTACTACTGGACCTTATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297450.7
CDS-3UTR TCA 90 bp CATAGTTCCAAAATAAGGTCCAGTAGTAGTTTGAAGCACAGCAAGCTCAGCAGTCGTGTTCTGGAAGAATaGAAGTGTAGGCACATTGCC +
Preference number: 4 (lower is better)
Translates to: HSSKIRSSSSLKHSKLSSRVLEE*KCRHIA
Trigger: GGCAATGTGCCTACACTTTCATTCTTCCAGAACACG...ACTGCTGAGCTTGCTGTGCTTCAAACTACTACTGGACCTTATTTTGGAACTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS-3UTR TCA 90 bp AGTTCCAAAATAAGGTCCAGTAGTAGTTTGAAGCACAGCAAGCTCAGCAGTTTCAGTAACTGGGCCCTTTaGAGTAGTGCCACTTTATCC +
Preference number: 4 (lower is better)
Translates to: SSKIRSSSSLKHSKLSSFSNWAL*SSATLS
Trigger: GGATAAAGTGGCACTACTTCAAAGGGCCCAGTTACT...GAAACTGCTGAGCTTGCTGTGCTTCAAACTACTACTGGACCTTATTTTGGAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR GCA 90 bp AGTTCCAAAATAAGGTCCAGTAGTAGTTTGAAGCACAGCAAGCTCAGCAGTTTCAAACTGTCATTGTACTaGCAGCACACTCCTTCCGTG +
Preference number: 4 (lower is better)
Translates to: SSKIRSSSSLKHSKLSSFKLSLY*QHTPSV
Trigger: CACGGAAGGAGTGTGCTGGCAGTACAATGACAGTTT...GAAACTGCTGAGCTTGCTGTGCTTCAAACTACTACTGGACCTTATTTTGGAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS-3UTR GCA 90 bp CATAGTTCCAAAATAAGGTCCAGTAGTAGTTTGAAGCACAGCAAGCTCAGCAGTTGTGGAGCATCTCTCTaGAGAGCGTTTGTGTTGTAC +
Preference number: 4 (lower is better)
Translates to: HSSKIRSSSSLKHSKLSSCGASL*RAFVLY
Trigger: GTACAACACAAACGCTCTGCAGAGAGATGCTCCACA...ACTGCTGAGCTTGCTGTGCTTCAAACTACTACTGGACCTTATTTTGGAACTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS-3UTR GCA 90 bp ACCTTGGTGACTTCACATAACTACCACTTATTGCTGGAAGGGAGACAATATTGTGCTGCTCTGTTTTCCTaGTGTCCCAGTGTGACCTTT +
Preference number: 4 (lower is better)
Translates to: TLVTSHNYHLLLEGRQYCAALFS*CPSVTF
Trigger: AAAGGTCACACTGGGACAGCAGGAAAACAGAGCAGC...ACAATATTGTCTCCCTTCCAGCAATAAGTGGTAGTTATGTGAAGTCACCAAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR GCA 90 bp GCACTGTCACCCCAAGTAGAGACTCTTGTGAACTCAAACGGCTCCAGATTCACGATAACTACCACTTATTaGTGGAAGGGAGACAATATT +
Preference number: 4 (lower is better)
Translates to: ALSPQVETLVNSNGSRFTITTTY*WKGDNI
Trigger: AATATTGTCTCCCTTCCAGCAATAAGTGGTAGTTAT...CGTGAATCTGGAGCCGTTTGAGTTCACAAGAGTCTCTACTTGGGGTGACAGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR CCA 90 bp TACCATAGTTCCAAAATAAGGTCCAGTAGTAGTTTGAAGCACAGCAAGCTCAGCCTATGTGAGTCAGAATaGCAGCGAGGAAAGCAAAGG +
Preference number: 4 (lower is better)
Translates to: YHSSKIRSSSSLKHSKLSLCESE*QRGKQR
Trigger: CCTTTGCTTTCCTCGCTGCCATTCTGACTCACATAG...GCTGAGCTTGCTGTGCTTCAAACTACTACTGGACCTTATTTTGGAACTATGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS-3UTR CCA 90 bp AAAATAAGGTCCAGTAGTAGTTTGAAGCACAGCAAGCTCAGCAGTTTCTTCCCTGCGTTTGTGTTGTACTaGTCTGTCGTACTCTCACGA +
Preference number: 4 (lower is better)
Translates to: KIRSSSSLKHSKLSSFFPAFVLY*SVVLSR
Trigger: TCGTGAGAGTACGACAGACCAGTACAACACAAACGC...AGGGAAGAAACTGCTGAGCTTGCTGTGCTTCAAACTACTACTGGACCTTATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS-3UTR CCA 90 bp AGTAGAGACTCTTGTGAACTCAAACGGCTCCAGATTCACGGTCAAGAACCTTGGTCTCTAGCTTGTAGGTaGATAATGAATTCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: SRDSCELKRLQIHGQEPWSLACR*IMNSPA
Trigger: TGCTGGAGAATTCATTATCCACCTACAAGCTAGAGA...CCAAGGTTCTTGACCGTGAATCTGGAGCCGTTTGAGTTCACAAGAGTCTCTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR CCA 90 bp TACCATAGTTCCAAAATAAGGTCCAGTAGTAGTTTGAAGCACAGCAAGCTCAGCAGATTGACAAGGTTGTaGACTGTGTCCATCAGCTCC +
Preference number: 4 (lower is better)
Translates to: YHSSKIRSSSSLKHSKLSRLTRL*TVSISS
Trigger: GGAGCTGATGGACACAGTCCACAACCTTGTCAATCT...GCTGAGCTTGCTGTGCTTCAAACTACTACTGGACCTTATTTTGGAACTATGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR CCA 90 bp GCACTGTCACCCCAAGTAGAGACTCTTGTGAACTCAAACGGCTCCAGATTCACGTTCTTTTATAGACACTaGAACAGTGTGAATCTGGTA +
Preference number: 4 (lower is better)
Translates to: ALSPQVETLVNSNGSRFTFFYRH*NSVNLV
Trigger: TACCAGATTCACACTGTTCCAGTGTCTATAAAAGAA...CGTGAATCTGGAGCCGTTTGAGTTCACAAGAGTCTCTACTTGGGGTGACAGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
3UTR CAA 72 bp GATCAAGTCACCAAGTTTGAAACTGGTATTGCTACCTaGCCAACAACTGTCTCTTTTATGAGAGGAGGCCCA +
Preference number: 4 (lower is better)
Translates to: DQVTKFETGIAT*PTTVSFMRGGP
Trigger: TGGGCCTCCTCTCATAAAAGAGACAGTTGTTGGCAAGGTAGCAATACCAGTTTCAAACTTGGTGACTTGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS-3UTR TCA 90 bp CACTTATTGCTGGAAGGGAGACAATATTGTTTGCTTCTGAAGTTTTCAAACAGTTGTTTCCTCTCTGTGTaGCCGTTCAGCATGGAGCCT +
Preference number: 4 (lower is better)
Translates to: HLLLEGRQYCLLLKFSNSCFLSV*PFSMEP
Trigger: AGGCTCCATGCTGAACGGTCACACAGAGAGGAAACA...ACTGTTTGAAAACTTCAGAAGCAAACAATATTGTCTCCCTTCCAGCAATAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS-3UTR TCA 90 bp TACCATAGTTCCAAAATAAGGTCCAGTAGTAGTTTGAAGCACAGCAAGCTCAGCGCACATTGCCCATGTTaGATCCGGTTATATCTTCTC +
Preference number: 4 (lower is better)
Translates to: YHSSKIRSSSSLKHSKLSAHCPC*IRLYLL
Trigger: GAGAAGATATAACCGGATTCAACATGGGCAATGTGC...GCTGAGCTTGCTGTGCTTCAAACTACTACTGGACCTTATTTTGGAACTATGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS-3UTR TCA 90 bp CATAGTTCCAAAATAAGGTCCAGTAGTAGTTTGAAGCACAGCAAGCTCAGCAGTGCACATTGCCCATGTTaGATCCGGTTATATCTTCTC +
Preference number: 4 (lower is better)
Translates to: HSSKIRSSSSLKHSKLSSAHCPC*IRLYLL
Trigger: GAGAAGATATAACCGGATTCAACATGGGCAATGTGC...ACTGCTGAGCTTGCTGTGCTTCAAACTACTACTGGACCTTATTTTGGAACTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS-3UTR TCA 90 bp CCAGATTCACGGTCAAGAACCTTGGTGACTTCACATAACTACCACTTATTGCTGTCAAGTCGAGAAGTTTaGTTTAGTACCTGGGTCTCA +
Preference number: 4 (lower is better)
Translates to: PDSRSRTLVTSHNYHLLLSSREV*FSTWVS
Trigger: TGAGACCCAGGTACTAAATCAAACTTCTCGACTTGA...CAGCAATAAGTGGTAGTTATGTGAAGTCACCAAGGTTCTTGACCGTGAATCTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS-3UTR TCA 90 bp GTAGAGACTCTTGTGAACTCAAACGGCTCCAGATTCACGGTCAAGAACCTTGGTATTTCATTTGTCTGTTaGAGAAGTTGCTTCTCTAGC +
Preference number: 4 (lower is better)
Translates to: VETLVNSNGSRFTVKNLGISFVC*RSCFSS
Trigger: GCTAGAGAAGCAACTTCTTCAACAGACAAATGAAAT...ACCAAGGTTCTTGACCGTGAATCTGGAGCCGTTTGAGTTCACAAGAGTCTCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR TCA 90 bp CCAAGTAGAGACTCTTGTGAACTCAAACGGCTCCAGATTCACGGTCAAGAACCTATTTCATTTGTCTGTTaGAGAAGTTGCTTCTCTAGC +
Preference number: 4 (lower is better)
Translates to: PSRDSCELKRLQIHGQEPISFVC*RSCFSS
Trigger: GCTAGAGAAGCAACTTCTTCAACAGACAAATGAAAT...AGGTTCTTGACCGTGAATCTGGAGCCGTTTGAGTTCACAAGAGTCTCTACTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR TCA 90 bp CATAGTTCCAAAATAAGGTCCAGTAGTAGTTTGAAGCACAGCAAGCTCAGCAGTTCCAACCTCCCCCATTaGCATCCATATTGCAAAACA +
Preference number: 4 (lower is better)
Translates to: HSSKIRSSSSLKHSKLSSSNLPH*HPYCKT
Trigger: TGTTTTGCAATATGGATGTCAATGGGGGAGGTTGGA...ACTGCTGAGCTTGCTGTGCTTCAAACTACTACTGGACCTTATTTTGGAACTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR TCA 90 bp AGAACCTTGGTGACTTCACATAACTACCACTTATTGCTGGAAGGGAGACAATATGAATCTGTCATACTGTaGATAGGCTCGGTTCCCTTC +
Preference number: 4 (lower is better)
Translates to: RTLVTSHNYHLLLEGRQYESVIL*IGSVPF
Trigger: GAAGGGAACCGAGCCTATTCACAGTATGACAGATTC...ATATTGTCTCCCTTCCAGCAATAAGTGGTAGTTATGTGAAGTCACCAAGGTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR TCA 90 bp ACCTTGGTGACTTCACATAACTACCACTTATTGCTGGAAGGGAGACAATATTGTGAATCTGTCATACTGTaGATAGGCTCGGTTCCCTTC +
Preference number: 4 (lower is better)
Translates to: TLVTSHNYHLLLEGRQYCESVIL*IGSVPF
Trigger: GAAGGGAACCGAGCCTATTCACAGTATGACAGATTC...ACAATATTGTCTCCCTTCCAGCAATAAGTGGTAGTTATGTGAAGTCACCAAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR TCA 90 bp AAAATAAGGTCCAGTAGTAGTTTGAAGCACAGCAAGCTCAGCAGTTTCTTCCCTATCCTCCTGTTAACATaGGGGCACATTTGCACATAC +
Preference number: 4 (lower is better)
Translates to: KIRSSSSLKHSKLSSFFPILLLT*GHICTY
Trigger: GTATGTGCAAATGTGCCCTCATGTTAACAGGAGGAT...AGGGAAGAAACTGCTGAGCTTGCTGTGCTTCAAACTACTACTGGACCTTATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR TCA 90 bp TACCATAGTTCCAAAATAAGGTCCAGTAGTAGTTTGAAGCACAGCAAGCTCAGCGGTCAAGAACCTTGGTaGCTTCACATAACTACCACT +
Preference number: 4 (lower is better)
Translates to: YHSSKIRSSSSLKHSKLSGQEPW*LHITTT
Trigger: AGTGGTAGTTATGTGAAGTCACCAAGGTTCTTGACC...GCTGAGCTTGCTGTGCTTCAAACTACTACTGGACCTTATTTTGGAACTATGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR TCA 90 bp AGTTCCAAAATAAGGTCCAGTAGTAGTTTGAAGCACAGCAAGCTCAGCAGTTTCGGTCAAGAACCTTGGTaGCTTCACATAACTACCACT +
Preference number: 4 (lower is better)
Translates to: SSKIRSSSSLKHSKLSSFGQEPW*LHITTT
Trigger: AGTGGTAGTTATGTGAAGTCACCAAGGTTCTTGACC...GAAACTGCTGAGCTTGCTGTGCTTCAAACTACTACTGGACCTTATTTTGGAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR GCA 90 bp TCTGGCTACCATAGTTCCAAAATAAGGTCCAGTAGTAGTTTGAAGCACAGCAAGTATCTGCTGCAGATCTaGTATTTTCTCCCAGACCTC +
Preference number: 4 (lower is better)
Translates to: SGYHSSKIRSSSSLKHSKYLLQI*YFLPDL
Trigger: GAGGTCTGGGAGAAAATAGCAGATCTGCAGCAGATA...CTTGCTGTGCTTCAAACTACTACTGGACCTTATTTTGGAACTATGGTAGCCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297450.7
CDS-3UTR GCA 90 bp AAAATAAGGTCCAGTAGTAGTTTGAAGCACAGCAAGCTCAGCAGTTTCTTCCCTTACTCTCACGACAGTTaGCATCGTGTTCTGGAAGAA +
Preference number: 4 (lower is better)
Translates to: KIRSSSSLKHSKLSSFFPYSHDS*HRVLEE
Trigger: TTCTTCCAGAACACGATGGCAACTGTCGTGAGAGTA...AGGGAAGAAACTGCTGAGCTTGCTGTGCTTCAAACTACTACTGGACCTTATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS-3UTR GCA 90 bp ACCTTGGTGACTTCACATAACTACCACTTATTGCTGGAAGGGAGACAATATTGTAAGGAGAGGCTTACCTaGTATGAAGAAGCCACCAAG +
Preference number: 4 (lower is better)
Translates to: TLVTSHNYHLLLEGRQYCKERLT*YEEATK
Trigger: CTTGGTGGCTTCTTCATAGCAGGTAAGCCTCTCCTT...ACAATATTGTCTCCCTTCCAGCAATAAGTGGTAGTTATGTGAAGTCACCAAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS-3UTR CCA 90 bp CTTATTGCTGGAAGGGAGACAATATTGTTTGCTTCTGAAGTTTTCAAACAGTTTATCCGGTTCCACGTGTaGAGCATCTCTCTGCAGAGC +
Preference number: 4 (lower is better)
Translates to: LIAGRETILFASEVFKQFIRFHV*SISLQS
Trigger: GCTCTGCAGAGAGATGCTCCACACGTGGAACCGGAT...AAACTGTTTGAAAACTTCAGAAGCAAACAATATTGTCTCCCTTCCAGCAATAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
3UTR CAA 72 bp GGCTACCATAGTTCCAAAATAAGGTCCAGTAGTAGTTaGAAGCACAGCAAGCTCAGCAGTTTCTTCCCTTTT +
Preference number: 4 (lower is better)
Translates to: GYHSSKIRSSSS*KHSKLSSFFPF
Trigger: AAAAGGGAAGAAACTGCTGAGCTTGCTGTGCTTCAAACTACTACTGGACCTTATTTTGGAACTATGGTAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR TCA 90 bp AGAACCTTGGTGACTTCACATAACTACCACTTATTGCTGGAAGGGAGACAATATTCTCCCAGACCTCAGTaGGTTTTATTAAGGTTGCAC +
Preference number: 4 (lower is better)
Translates to: RTLVTSHNYHLLLEGRQYSPRPQ*VLLRLH
Trigger: GTGCAACCTTAATAAAACTCACTGAGGTCTGGGAGA...ATATTGTCTCCCTTCCAGCAATAAGTGGTAGTTATGTGAAGTCACCAAGGTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297450.7
CDS-3UTR TCA 90 bp TACCATAGTTCCAAAATAAGGTCCAGTAGTAGTTTGAAGCACAGCAAGCTCAGCAGCATGTACTGCCTCTaGCTGGTAATGGCAAAAATA +
Preference number: 4 (lower is better)
Translates to: YHSSKIRSSSSLKHSKLSSMYCL*LVMAKI
Trigger: TATTTTTGCCATTACCAGTCAGAGGCAGTACATGCT...GCTGAGCTTGCTGTGCTTCAAACTACTACTGGACCTTATTTTGGAACTATGGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR TCA 90 bp CATAGTTCCAAAATAAGGTCCAGTAGTAGTTTGAAGCACAGCAAGCTCAGCAGTAGCATGTACTGCCTCTaGCTGGTAATGGCAAAAATA +
Preference number: 4 (lower is better)
Translates to: HSSKIRSSSSLKHSKLSSSMYCL*LVMAKI
Trigger: TATTTTTGCCATTACCAGTCAGAGGCAGTACATGCT...ACTGCTGAGCTTGCTGTGCTTCAAACTACTACTGGACCTTATTTTGGAACTATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR TCA 90 bp GAAGTTTTTAGAAGGAGAGGCTTACCTGCTATGAAGAAGCCACCAAGAATAGAACCTGCTGTCCCAGTGTaGCCTTTTAAATACAACCTA +
Preference number: 4 (lower is better)
Translates to: EVFRRRGLPAMKKPPRIEPAVPV*PFKYNL
Trigger: TAGGTTGTATTTAAAAGGTCACACTGGGACAGCAGG...TTCTATTCTTGGTGGCTTCTTCATAGCAGGTAAGCCTCTCCTTCTAAAAACTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS-3UTR TCA 90 bp AGAACCTTGGTGACTTCACATAACTACCACTTATTGCTGGAAGGGAGACAATATCCTGCTGTCCCAGTGTaGCCTTTTAAATACAACCTA +
Preference number: 4 (lower is better)
Translates to: RTLVTSHNYHLLLEGRQYPAVPV*PFKYNL
Trigger: TAGGTTGTATTTAAAAGGTCACACTGGGACAGCAGG...ATATTGTCTCCCTTCCAGCAATAAGTGGTAGTTATGTGAAGTCACCAAGGTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR TCA 90 bp TTTCAAACAGTTTCTCACCTGGCAGCTTCTCCGGATTTCTTTGTTGCTTTCATAGGTCAAGAACCTTGGTaGCTTCACATAACTACCACT +
Preference number: 4 (lower is better)
Translates to: FQTVSHLAASPDFFVAFIGQEPW*LHITTT
Trigger: AGTGGTAGTTATGTGAAGTCACCAAGGTTCTTGACC...TATGAAAGCAACAAAGAAATCCGGAGAAGCTGCCAGGTGAGAAACTGTTTGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR GCA 90 bp CTTATTGCTGGAAGGGAGACAATATTGTTTGCTTCTGAAGTTTTCAAACAGTTTGACTTCGGCGCTGATTaGTGCACCCTATGTGAGTCA +
Preference number: 4 (lower is better)
Translates to: LIAGRETILFASEVFKQFDFGAD*CTLCES
Trigger: TGACTCACATAGGGTGCAGCAATCAGCGCCGAAGTC...AAACTGTTTGAAAACTTCAGAAGCAAACAATATTGTCTCCCTTCCAGCAATAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS-3UTR GCA 90 bp GTAGAGACTCTTGTGAACTCAAACGGCTCCAGATTCACGGTCAAGAACCTTGGTAGCTTGATATACATCTaGACAGTCTCTAAATGGTTT +
Preference number: 4 (lower is better)
Translates to: VETLVNSNGSRFTVKNLGSLIYI*TVSKWF
Trigger: AAACCATTTAGAGACTGTGCAGATGTATATCAAGCT...ACCAAGGTTCTTGACCGTGAATCTGGAGCCGTTTGAGTTCACAAGAGTCTCTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR GCA 90 bp CCAGATTCACGGTCAAGAACCTTGGTGACTTCACATAACTACCACTTATTGCTGCTGGTATTGCTACCTTaGCAACAACTGTCTCTTTTA +
Preference number: 4 (lower is better)
Translates to: PDSRSRTLVTSHNYHLLLLVLLP*QQLSLL
Trigger: TAAAAGAGACAGTTGTTGGCAAGGTAGCAATACCAG...CAGCAATAAGTGGTAGTTATGTGAAGTCACCAAGGTTCTTGACCGTGAATCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS-3UTR CCA 90 bp TACCATAGTTCCAAAATAAGGTCCAGTAGTAGTTTGAAGCACAGCAAGCTCAGCACATTCCATTTAGATTaGAGGGGCCACAAGCATCAA +
Preference number: 4 (lower is better)
Translates to: YHSSKIRSSSSLKHSKLSTFHLD*RGHKHQ
Trigger: TTGATGCTTGTGGCCCCTCCAATCTAAATGGAATGT...GCTGAGCTTGCTGTGCTTCAAACTACTACTGGACCTTATTTTGGAACTATGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR TCA 90 bp TACCATAGTTCCAAAATAAGGTCCAGTAGTAGTTTGAAGCACAGCAAGCTCAGCACATGTTCCAGATGTTaGAGTTTCTGGGAAGAGAAA +
Preference number: 4 (lower is better)
Translates to: YHSSKIRSSSSLKHSKLSTCSRC*SFWEEK
Trigger: TTTCTCTTCCCAGAAACTTCAACATCTGGAACATGT...GCTGAGCTTGCTGTGCTTCAAACTACTACTGGACCTTATTTTGGAACTATGGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS-3UTR TCA 90 bp AGTTCCAAAATAAGGTCCAGTAGTAGTTTGAAGCACAGCAAGCTCAGCAGTTTCACATGTTCCAGATGTTaGAGTTTCTGGGAAGAGAAA +
Preference number: 4 (lower is better)
Translates to: SSKIRSSSSLKHSKLSSFTCSRC*SFWEEK
Trigger: TTTCTCTTCCCAGAAACTTCAACATCTGGAACATGT...GAAACTGCTGAGCTTGCTGTGCTTCAAACTACTACTGGACCTTATTTTGGAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS-3UTR TCA 90 bp TTTCAAACAGTTTCTCACCTGGCAGCTTCTCCGGATTTCTTTGTTGCTTTCATAAGCATGTACTGCCTCTaGCTGGTAATGGCAAAAATA +
Preference number: 4 (lower is better)
Translates to: FQTVSHLAASPDFFVAFISMYCL*LVMAKI
Trigger: TATTTTTGCCATTACCAGTCAGAGGCAGTACATGCT...TATGAAAGCAACAAAGAAATCCGGAGAAGCTGCCAGGTGAGAAACTGTTTGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR TCA 90 bp AGAACCTTGGTGACTTCACATAACTACCACTTATTGCTGGAAGGGAGACAATATAGCATGTACTGCCTCTaGCTGGTAATGGCAAAAATA +
Preference number: 4 (lower is better)
Translates to: RTLVTSHNYHLLLEGRQYSMYCL*LVMAKI
Trigger: TATTTTTGCCATTACCAGTCAGAGGCAGTACATGCT...ATATTGTCTCCCTTCCAGCAATAAGTGGTAGTTATGTGAAGTCACCAAGGTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR CCA 90 bp CTTATTGCTGGAAGGGAGACAATATTGTTTGCTTCTGAAGTTTTCAAACAGTTTGCATTCTGCTGTATCTaGGCCATCTCCGACTTCATG +
Preference number: 4 (lower is better)
Translates to: LIAGRETILFASEVFKQFAFCCI*AISDFM
Trigger: CATGAAGTCGGAGATGGCCCAGATACAGCAGAATGC...AAACTGTTTGAAAACTTCAGAAGCAAACAATATTGTCTCCCTTCCAGCAATAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS-3UTR TCA 90 bp TCTGGCTACCATAGTTCCAAAATAAGGTCCAGTAGTAGTTTGAAGCACAGCAAGATTTCATTTGTCTGTTaGAGAAGTTGCTTCTCTAGC +
Preference number: 4 (lower is better)
Translates to: SGYHSSKIRSSSSLKHSKISFVC*RSCFSS
Trigger: GCTAGAGAAGCAACTTCTTCAACAGACAAATGAAAT...CTTGCTGTGCTTCAAACTACTACTGGACCTTATTTTGGAACTATGGTAGCCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR GCA 90 bp CCAGATTCACGGTCAAGAACCTTGGTGACTTCACATAACTACCACTTATTGCTGAGCTTGATATACATCTaGACAGTCTCTAAATGGTTT +
Preference number: 4 (lower is better)
Translates to: PDSRSRTLVTSHNYHLLLSLIYI*TVSKWF
Trigger: AAACCATTTAGAGACTGTGCAGATGTATATCAAGCT...CAGCAATAAGTGGTAGTTATGTGAAGTCACCAAGGTTCTTGACCGTGAATCTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR CCA 90 bp GAAGTTTTTAGAAGGAGAGGCTTACCTGCTATGAAGAAGCCACCAAGAATAGAATCTCTAGCTTGTAGGTaGATAATGAATTCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: EVFRRRGLPAMKKPPRIESLACR*IMNSPA
Trigger: TGCTGGAGAATTCATTATCCACCTACAAGCTAGAGA...TTCTATTCTTGGTGGCTTCTTCATAGCAGGTAAGCCTCTCCTTCTAAAAACTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS-3UTR CCA 90 bp TTTCAAACAGTTTCTCACCTGGCAGCTTCTCCGGATTTCTTTGTTGCTTTCATATCTCTAGCTTGTAGGTaGATAATGAATTCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: FQTVSHLAASPDFFVAFISLACR*IMNSPA
Trigger: TGCTGGAGAATTCATTATCCACCTACAAGCTAGAGA...TATGAAAGCAACAAAGAAATCCGGAGAAGCTGCCAGGTGAGAAACTGTTTGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR CCA 90 bp AGAACCTTGGTGACTTCACATAACTACCACTTATTGCTGGAAGGGAGACAATATTCTCTAGCTTGTAGGTaGATAATGAATTCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: RTLVTSHNYHLLLEGRQYSLACR*IMNSPA
Trigger: TGCTGGAGAATTCATTATCCACCTACAAGCTAGAGA...ATATTGTCTCCCTTCCAGCAATAAGTGGTAGTTATGTGAAGTCACCAAGGTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR CCA 90 bp CTTATTGCTGGAAGGGAGACAATATTGTTTGCTTCTGAAGTTTTCAAACAGTTTAGATTGACAAGGTTGTaGACTGTGTCCATCAGCTCC +
Preference number: 4 (lower is better)
Translates to: LIAGRETILFASEVFKQFRLTRL*TVSISS
Trigger: GGAGCTGATGGACACAGTCCACAACCTTGTCAATCT...AAACTGTTTGAAAACTTCAGAAGCAAACAATATTGTCTCCCTTCCAGCAATAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR CCA 90 bp TACCATAGTTCCAAAATAAGGTCCAGTAGTAGTTTGAAGCACAGCAAGCTCAGCACTACCACTTATTGCTaGAAGGGAGACAATATTGTT +
Preference number: 4 (lower is better)
Translates to: YHSSKIRSSSSLKHSKLSTTTYC*KGDNIV
Trigger: AACAATATTGTCTCCCTTCCAGCAATAAGTGGTAGT...GCTGAGCTTGCTGTGCTTCAAACTACTACTGGACCTTATTTTGGAACTATGGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR CCA 90 bp CATAGTTCCAAAATAAGGTCCAGTAGTAGTTTGAAGCACAGCAAGCTCAGCAGTACTACCACTTATTGCTaGAAGGGAGACAATATTGTT +
Preference number: 4 (lower is better)
Translates to: HSSKIRSSSSLKHSKLSSTTTYC*KGDNIV
Trigger: AACAATATTGTCTCCCTTCCAGCAATAAGTGGTAGT...ACTGCTGAGCTTGCTGTGCTTCAAACTACTACTGGACCTTATTTTGGAACTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
3UTR CAA 72 bp AACTACCACTTATTGCTGGAAGGGAGACAATATTGTTaGCTTCTGAAGTTTTCAAACAGTTTCTCACCTGGC +
Preference number: 4 (lower is better)
Translates to: NYHLLLEGRQYC*LLKFSNSFSPG
Trigger: GCCAGGTGAGAAACTGTTTGAAAACTTCAGAAGCAAACAATATTGTCTCCCTTCCAGCAATAAGTGGTAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR TCA 90 bp CACTTATTGCTGGAAGGGAGACAATATTGTTTGCTTCTGAAGTTTTCAAACAGTTCAAGTCGAGAAGTTTaGTTTAGTACCTGGGTCTCA +
Preference number: 4 (lower is better)
Translates to: HLLLEGRQYCLLLKFSNSSSREV*FSTWVS
Trigger: TGAGACCCAGGTACTAAATCAAACTTCTCGACTTGA...ACTGTTTGAAAACTTCAGAAGCAAACAATATTGTCTCCCTTCCAGCAATAAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS-3UTR TCA 90 bp CTTATTGCTGGAAGGGAGACAATATTGTTTGCTTCTGAAGTTTTCAAACAGTTTATCCTCCTGTTAACATaGGGGCACATTTGCACATAC +
Preference number: 4 (lower is better)
Translates to: LIAGRETILFASEVFKQFILLLT*GHICTY
Trigger: GTATGTGCAAATGTGCCCTCATGTTAACAGGAGGAT...AAACTGTTTGAAAACTTCAGAAGCAAACAATATTGTCTCCCTTCCAGCAATAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR GCA 90 bp CATAGTTCCAAAATAAGGTCCAGTAGTAGTTTGAAGCACAGCAAGCTCAGCAGTATAACTACCACTTATTaGTGGAAGGGAGACAATATT +
Preference number: 4 (lower is better)
Translates to: HSSKIRSSSSLKHSKLSSITTTY*WKGDNI
Trigger: AATATTGTCTCCCTTCCAGCAATAAGTGGTAGTTAT...ACTGCTGAGCTTGCTGTGCTTCAAACTACTACTGGACCTTATTTTGGAACTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR GCA 90 bp TTTCAAACAGTTTCTCACCTGGCAGCTTCTCCGGATTTCTTTGTTGCTTTCATACTGCTCCAGAGTACTTaGTTTTACTTCAACTTAACA +
Preference number: 4 (lower is better)
Translates to: FQTVSHLAASPDFFVAFILLQST*FYFNLT
Trigger: TGTTAAGTTGAAGTAAAAGCAAGTACTCTGGAGCAG...TATGAAAGCAACAAAGAAATCCGGAGAAGCTGCCAGGTGAGAAACTGTTTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS-3UTR GCA 90 bp CATAGTTCCAAAATAAGGTCCAGTAGTAGTTTGAAGCACAGCAAGCTCAGCAGTTACTGTAAAATGAACTaGTCCAGAGTACTTGCTTTT +
Preference number: 4 (lower is better)
Translates to: HSSKIRSSSSLKHSKLSSYCKMN*SRVLAF
Trigger: AAAAGCAAGTACTCTGGAGCAGTTCATTTTACAGTA...ACTGCTGAGCTTGCTGTGCTTCAAACTACTACTGGACCTTATTTTGGAACTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS-3UTR CCA 90 bp AGTTCCAAAATAAGGTCCAGTAGTAGTTTGAAGCACAGCAAGCTCAGCAGTTTCAATTGCCTAAGGGAATaGACTGAAGGAGAAATATAT +
Preference number: 4 (lower is better)
Translates to: SSKIRSSSSLKHSKLSSFNCLRE*TEGEIY
Trigger: ATATATTTCTCCTTCAGTCCATTCCCTTAGGCAATT...GAAACTGCTGAGCTTGCTGTGCTTCAAACTACTACTGGACCTTATTTTGGAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS-3UTR CCA 90 bp TCTGGCTACCATAGTTCCAAAATAAGGTCCAGTAGTAGTTTGAAGCACAGCAAGCCATTGAGTTATTTATaGCAACTAGCAGTCAGAATT +
Preference number: 4 (lower is better)
Translates to: SGYHSSKIRSSSSLKHSKPLSYL*QLAVRI
Trigger: AATTCTGACTGCTAGTTGCCATAAATAACTCAATGG...CTTGCTGTGCTTCAAACTACTACTGGACCTTATTTTGGAACTATGGTAGCCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS-3UTR GCA 90 bp AGAACCTTGGTGACTTCACATAACTACCACTTATTGCTGGAAGGGAGACAATATATAACTACCACTTATTaGTGGAAGGGAGACAATATT +
Preference number: 4 (lower is better)
Translates to: RTLVTSHNYHLLLEGRQYITTTY*WKGDNI
Trigger: AATATTGTCTCCCTTCCAGCAATAAGTGGTAGTTAT...ATATTGTCTCCCTTCCAGCAATAAGTGGTAGTTATGTGAAGTCACCAAGGTTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR CCA 90 bp CACTTATTGCTGGAAGGGAGACAATATTGTTTGCTTCTGAAGTTTTCAAACAGTACTACCACTTATTGCTaGAAGGGAGACAATATTGTT +
Preference number: 4 (lower is better)
Translates to: HLLLEGRQYCLLLKFSNSTTTYC*KGDNIV
Trigger: AACAATATTGTCTCCCTTCCAGCAATAAGTGGTAGT...ACTGTTTGAAAACTTCAGAAGCAAACAATATTGTCTCCCTTCCAGCAATAAGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR GCA 90 bp CTTATTGCTGGAAGGGAGACAATATTGTTTGCTTCTGAAGTTTTCAAACAGTTTAGCTTGATATACATCTaGACAGTCTCTAAATGGTTT +
Preference number: 4 (lower is better)
Translates to: LIAGRETILFASEVFKQFSLIYI*TVSKWF
Trigger: AAACCATTTAGAGACTGTGCAGATGTATATCAAGCT...AAACTGTTTGAAAACTTCAGAAGCAAACAATATTGTCTCCCTTCCAGCAATAAG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR CCA 90 bp CTTATTGCTGGAAGGGAGACAATATTGTTTGCTTCTGAAGTTTTCAAACAGTTTTTCTTTTATAGACACTaGAACAGTGTGAATCTGGTA +
Preference number: 4 (lower is better)
Translates to: LIAGRETILFASEVFKQFFFYRH*NSVNLV
Trigger: TACCAGATTCACACTGTTCCAGTGTCTATAAAAGAA...AAACTGTTTGAAAACTTCAGAAGCAAACAATATTGTCTCCCTTCCAGCAATAAG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS-3UTR CCA 90 bp CTTATTGCTGGAAGGGAGACAATATTGTTTGCTTCTGAAGTTTTCAAACAGTTTAATTGCCTAAGGGAATaGACTGAAGGAGAAATATAT +
Preference number: 4 (lower is better)
Translates to: LIAGRETILFASEVFKQFNCLRE*TEGEIY
Trigger: ATATATTTCTCCTTCAGTCCATTCCCTTAGGCAATT...AAACTGTTTGAAAACTTCAGAAGCAAACAATATTGTCTCCCTTCCAGCAATAAG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS-3UTR CAA 90 bp GCCCGACAGTCAGTGGAGTTTTCTATAGTCGAGCCACGTGAGCACTGTCACCCCTGCCTCTCGCAAAACTaGCTCCTTTCTTCTGACCTC +
Preference number: 5 (lower is better)
Translates to: ARQSVEFSIVEPREHCHPCLSQN*LLSSDL
Trigger: GAGGTCAGAAGAAAGGAGCAAGTTTTGCGAGAGGCA...GGGGTGACAGTGCTCACGTGGCTCGACTATAGAAAACTCCACTGACTGTCGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS-3UTR CAA 90 bp GCCCGACAGTCAGTGGAGTTTTCTATAGTCGAGCCACGTGAGCACTGTCACCCCTGCAGAGCGTTTGTGTaGTACTGGTCTGTCGTACTC +
Preference number: 5 (lower is better)
Translates to: ARQSVEFSIVEPREHCHPCRAFV*YWSVVL
Trigger: GAGTACGACAGACCAGTACAACACAAACGCTCTGCA...GGGGTGACAGTGCTCACGTGGCTCGACTATAGAAAACTCCACTGACTGTCGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS CCA 90 bp GGTTCCACGTGTGGAGCATCTCTCTGCAGAGCGTTTGTGTTGTACTaGTCTGTCGTACTCTCACGACAGTTGCCATCGTGTTCTGGAAGA +
Preference number: 5 (lower is better)
Translates to: GSTCGASLCRAFVLY*SVVLSRQLPSCSGR
Trigger: TCTTCCAGAACACGATGGCAACTGTCGTGAGAGTACGACAGACCAGTACAACACAAACGCTCTGCAGAGAGATGCTCCACACGTGGAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS-3UTR CAA 90 bp CGACAGTCAGTGGAGTTTTCTATAGTCGAGCCACGTGAGCACTGTCACCCCAAGGTACTCTCACGACAGTaGCCATCGTGTTCTGGAAGA +
Preference number: 5 (lower is better)
Translates to: RQSVEFSIVEPREHCHPKVLSRQ*PSCSGR
Trigger: TCTTCCAGAACACGATGGCAACTGTCGTGAGAGTAC...CTTGGGGTGACAGTGCTCACGTGGCTCGACTATAGAAAACTCCACTGACTGTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS-3UTR CAA 90 bp CACGTGAGCACTGTCACCCCAAGTAGAGACTCTTGTGAACTCAAACGGCTCCAGAGGTCCAGTAGTAGTTaGAAGCACAGCAAGCTCAGC +
Preference number: 5 (lower is better)
Translates to: HVSTVTPSRDSCELKRLQRSSSS*KHSKLS
Trigger: GCTGAGCTTGCTGTGCTTCAAACTACTACTGGACCT...CTGGAGCCGTTTGAGTTCACAAGAGTCTCTACTTGGGGTGACAGTGCTCACGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS GCA 90 bp TCCGGTTATATCTTCTCCCACTGTTTTCTGGACTTCGGCGCTGATTaGTGCACCCTATGTGAGTCAGAATGGCAGCGAGGAAAGCAAAGG +
Preference number: 5 (lower is better)
Translates to: SGYIFSHCFLDFGAD*CTLCESEWQRGKQR
Trigger: CCTTTGCTTTCCTCGCTGCCATTCTGACTCACATAGGGTGCAGCAATCAGCGCCGAAGTCCAGAAAACAGTGGGAGAAGATATAACCGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS GCA 90 bp AGTTTCTGGGAAGAGAAATCCGGTTCCACGTGTGGAGCATCTCTCTaGAGAGCGTTTGTGTTGTACTGGTCTGTCGTACTCTCACGACAG +
Preference number: 5 (lower is better)
Translates to: SFWEEKSGSTCGASL*RAFVLYWSVVLSRQ
Trigger: CTGTCGTGAGAGTACGACAGACCAGTACAACACAAACGCTCTGCAGAGAGATGCTCCACACGTGGAACCGGATTTCTCTTCCCAGAAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS-3UTR CAA 90 bp GCCCGACAGTCAGTGGAGTTTTCTATAGTCGAGCCACGTGAGCACTGTCACCCCCAGTTTTCCATGGTTTaGTCCCGCAGTATAGAACAT +
Preference number: 5 (lower is better)
Translates to: ARQSVEFSIVEPREHCHPQFSMV*SRSIEH
Trigger: ATGTTCTATACTGCGGGACAAAACCATGGAAAACTG...GGGGTGACAGTGCTCACGTGGCTCGACTATAGAAAACTCCACTGACTGTCGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR CAA 90 bp GCCCGACAGTCAGTGGAGTTTTCTATAGTCGAGCCACGTGAGCACTGTCACCCCACTGGTATTGCTACCTaGCCAACAACTGTCTCTTTT +
Preference number: 5 (lower is better)
Translates to: ARQSVEFSIVEPREHCHPTGIAT*PTTVSF
Trigger: AAAAGAGACAGTTGTTGGCAAGGTAGCAATACCAGT...GGGGTGACAGTGCTCACGTGGCTCGACTATAGAAAACTCCACTGACTGTCGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS-3UTR CAA 90 bp GCCCGACAGTCAGTGGAGTTTTCTATAGTCGAGCCACGTGAGCACTGTCACCCCAGTTTGAAACTGGTATaGCTACCTTGCCAACAACTG +
Preference number: 5 (lower is better)
Translates to: ARQSVEFSIVEPREHCHPSLKLV*LPCQQL
Trigger: CAGTTGTTGGCAAGGTAGCAATACCAGTTTCAAACT...GGGGTGACAGTGCTCACGTGGCTCGACTATAGAAAACTCCACTGACTGTCGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS GCA 90 bp GAATGGCAGCGAGGAAAGCAAAGGAAAGGAAAACTGTCATTGTACTaGCAGCACACTCCTTCCGTGCCTCTCGCAAAACTTGCTCCTTTC +
Preference number: 5 (lower is better)
Translates to: EWQRGKQRKGKLSLY*QHTPSVPLAKLAPF
Trigger: GAAAGGAGCAAGTTTTGCGAGAGGCACGGAAGGAGTGTGCTGGCAGTACAATGACAGTTTTCCTTTCCTTTGCTTTCCTCGCTGCCATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS CCA 90 bp GTACTTCCTCAGAGTGGAAGGGTCCAAGATATACATGCCTACTTGTaGGCATATGAAATAGGACAACTCTCCTCCCAAGGCTCTCGCCCT +
Preference number: 5 (lower is better)
Translates to: VLPQSGRVQDIHAYL*AYEIGQLSSQGSRP
Trigger: AGGGCGAGAGCCTTGGGAGGAGAGTTGTCCTATTTCATATGCCCACAAGTAGGCATGTATATCTTGGACCCTTCCACTCTGAGGAAGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522400.1
CDS-3UTR CAA 90 bp TCGAGCCACGTGAGCACTGTCACCCCAAGTAGAGACTCTTGTGAACTCAAACGGGGCACATTGCCCATGTaGAATCCGGTTATATCTTCT +
Preference number: 5 (lower is better)
Translates to: SSHVSTVTPSRDSCELKRGTLPM*NPVISS
Trigger: AGAAGATATAACCGGATTCAACATGGGCAATGTGCC...CCGTTTGAGTTCACAAGAGTCTCTACTTGGGGTGACAGTGCTCACGTGGCTCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS-3UTR CAA 90 bp CACGTGAGCACTGTCACCCCAAGTAGAGACTCTTGTGAACTCAAACGGCTCCAGTCCATCTTCACGATGTaGTATTACAGTCCAACCTCC +
Preference number: 5 (lower is better)
Translates to: HVSTVTPSRDSCELKRLQSIFTM*YYSPTS
Trigger: GGAGGTTGGACTGTAATACAACATCGTGAAGATGGA...CTGGAGCCGTTTGAGTTCACAAGAGTCTCTACTTGGGGTGACAGTGCTCACGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR CAA 90 bp CGACAGTCAGTGGAGTTTTCTATAGTCGAGCCACGTGAGCACTGTCACCCCAAGAACATTCCATTTAGATaGGAGGGGCCACAAGCATCA +
Preference number: 5 (lower is better)
Translates to: RQSVEFSIVEPREHCHPKNIPFR*EGPQAS
Trigger: TGATGCTTGTGGCCCCTCCAATCTAAATGGAATGTT...CTTGGGGTGACAGTGCTCACGTGGCTCGACTATAGAAAACTCCACTGACTGTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR CAA 90 bp GCCCGACAGTCAGTGGAGTTTTCTATAGTCGAGCCACGTGAGCACTGTCACCCCCATAACTACCACTTATaGCTGGAAGGGAGACAATAT +
Preference number: 5 (lower is better)
Translates to: ARQSVEFSIVEPREHCHPHNYHL*LEGRQY
Trigger: ATATTGTCTCCCTTCCAGCAATAAGTGGTAGTTATG...GGGGTGACAGTGCTCACGTGGCTCGACTATAGAAAACTCCACTGACTGTCGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR CAA 90 bp CGACAGTCAGTGGAGTTTTCTATAGTCGAGCCACGTGAGCACTGTCACCCCAAGTCACGGTCAAGAACCTaGGTGACTTCACATAACTAC +
Preference number: 5 (lower is better)
Translates to: RQSVEFSIVEPREHCHPKSRSRT*VTSHNY
Trigger: GTAGTTATGTGAAGTCACCAAGGTTCTTGACCGTGA...CTTGGGGTGACAGTGCTCACGTGGCTCGACTATAGAAAACTCCACTGACTGTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR CAA 90 bp GCCCGACAGTCAGTGGAGTTTTCTATAGTCGAGCCACGTGAGCACTGTCACCCCTCTACCACACACTTATaGTCCATGTACTACAGTTCA +
Preference number: 5 (lower is better)
Translates to: ARQSVEFSIVEPREHCHPSTTHL*SMYYSS
Trigger: TGAACTGTAGTACATGGACAATAAGTGTGTGGTAGA...GGGGTGACAGTGCTCACGTGGCTCGACTATAGAAAACTCCACTGACTGTCGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS-3UTR CAA 90 bp GCCCGACAGTCAGTGGAGTTTTCTATAGTCGAGCCACGTGAGCACTGTCACCCCATCAAGTCACCAAGTTaGAAACTGGTATTGCTACCT +
Preference number: 5 (lower is better)
Translates to: ARQSVEFSIVEPREHCHPIKSPS*KLVLLP
Trigger: AGGTAGCAATACCAGTTTCAAACTTGGTGACTTGAT...GGGGTGACAGTGCTCACGTGGCTCGACTATAGAAAACTCCACTGACTGTCGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS TCA 90 bp TCAGAGTGGAAGGGTCCAAGATATACATGCCTACTTGTGGGCATATaGAATAGGACAACTCTCCTCCCAAGGCTCTCGCCCTACTTTGAC +
Preference number: 5 (lower is better)
Translates to: SEWKGPRYTCLLVGI*NRTTLLPRLSPYFD
Trigger: GTCAAAGTAGGGCGAGAGCCTTGGGAGGAGAGTTGTCCTATTTCATATGCCCACAAGTAGGCATGTATATCTTGGACCCTTCCACTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522400.1
CDS GCA 90 bp GGTTATATCTTCTCCCACTGTTTTCTGGACTTCGGCGCTGATTGCTaGACCCTATGTGAGTCAGAATGGCAGCGAGGAAAGCAAAGGAAA +
Preference number: 5 (lower is better)
Translates to: GYIFSHCFLDFGADC*TLCESEWQRGKQRK
Trigger: TTTCCTTTGCTTTCCTCGCTGCCATTCTGACTCACATAGGGTGCAGCAATCAGCGCCGAAGTCCAGAAAACAGTGGGAGAAGATATAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS CCA 90 bp TTTCTGGACTTCGGCGCTGATTGCTGCACCCTATGTGAGTCAGAATaGCAGCGAGGAAAGCAAAGGAAAGGAAAACTGTCATTGTACTGC +
Preference number: 5 (lower is better)
Translates to: FLDFGADCCTLCESE*QRGKQRKGKLSLYC
Trigger: GCAGTACAATGACAGTTTTCCTTTCCTTTGCTTTCCTCGCTGCCATTCTGACTCACATAGGGTGCAGCAATCAGCGCCGAAGTCCAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS CCA 90 bp ACATTGCCCATGTTGAATCCGGTTATATCTTCTCCCACTGTTTTCTaGACTTCGGCGCTGATTGCTGCACCCTATGTGAGTCAGAATGGC +
Preference number: 5 (lower is better)
Translates to: TLPMLNPVISSPTVF*TSALIAAPYVSQNG
Trigger: GCCATTCTGACTCACATAGGGTGCAGCAATCAGCGCCGAAGTCCAGAAAACAGTGGGAGAAGATATAACCGGATTCAACATGGGCAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS CCA 90 bp TTCCAGATGTTGAAGTTTCTGGGAAGAGAAATCCGGTTCCACGTGTaGAGCATCTCTCTGCAGAGCGTTTGTGTTGTACTGGTCTGTCGT +
Preference number: 5 (lower is better)
Translates to: FQMLKFLGREIRFHV*SISLQSVCVVLVCR
Trigger: ACGACAGACCAGTACAACACAAACGCTCTGCAGAGAGATGCTCCACACGTGGAACCGGATTTCTCTTCCCAGAAACTTCAACATCTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS-3UTR CAA 90 bp CGACAGTCAGTGGAGTTTTCTATAGTCGAGCCACGTGAGCACTGTCACCCCAAGCAGTTTTCCATGGTTTaGTCCCGCAGTATAGAACAT +
Preference number: 5 (lower is better)
Translates to: RQSVEFSIVEPREHCHPKQFSMV*SRSIEH
Trigger: ATGTTCTATACTGCGGGACAAAACCATGGAAAACTG...CTTGGGGTGACAGTGCTCACGTGGCTCGACTATAGAAAACTCCACTGACTGTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR CAA 90 bp CACGTGAGCACTGTCACCCCAAGTAGAGACTCTTGTGAACTCAAACGGCTCCAGCAGTTTTCCATGGTTTaGTCCCGCAGTATAGAACAT +
Preference number: 5 (lower is better)
Translates to: HVSTVTPSRDSCELKRLQQFSMV*SRSIEH
Trigger: ATGTTCTATACTGCGGGACAAAACCATGGAAAACTG...CTGGAGCCGTTTGAGTTCACAAGAGTCTCTACTTGGGGTGACAGTGCTCACGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR CAA 90 bp AGTAGAGACTCTTGTGAACTCAAACGGCTCCAGATTCACGGTCAAGAACCTTGGAGGTCCAGTAGTAGTTaGAAGCACAGCAAGCTCAGC +
Preference number: 5 (lower is better)
Translates to: SRDSCELKRLQIHGQEPWRSSSS*KHSKLS
Trigger: GCTGAGCTTGCTGTGCTTCAAACTACTACTGGACCT...CCAAGGTTCTTGACCGTGAATCTGGAGCCGTTTGAGTTCACAAGAGTCTCTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR CAA 90 bp GTAGAGACTCTTGTGAACTCAAACGGCTCCAGATTCACGGTCAAGAACCTTGGTAGGTCCAGTAGTAGTTaGAAGCACAGCAAGCTCAGC +
Preference number: 5 (lower is better)
Translates to: VETLVNSNGSRFTVKNLGRSSSS*KHSKLS
Trigger: GCTGAGCTTGCTGTGCTTCAAACTACTACTGGACCT...ACCAAGGTTCTTGACCGTGAATCTGGAGCCGTTTGAGTTCACAAGAGTCTCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS TCA 90 bp TCTACCCTATCTGCTGCAGATCTGCTATTTTCTCCCAGACCTCAGTaGGTTTTATTAAGGTTGCACATCCAAGCCAAGCTGGAAGCAGGC +
Preference number: 5 (lower is better)
Translates to: STLSAADLLFSPRPQ*VLLRLHIQAKLEAG
Trigger: GCCTGCTTCCAGCTTGGCTTGGATGTGCAACCTTAATAAAACTCACTGAGGTCTGGGAGAAAATAGCAGATCTGCAGCAGATAGGGTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297450.7
CDS-3UTR CAA 90 bp CCAAGTAGAGACTCTTGTGAACTCAAACGGCTCCAGATTCACGGTCAAGAACCTGAAAGTGTAGGCACATaGCCCATGTTGAATCCGGTT +
Preference number: 5 (lower is better)
Translates to: PSRDSCELKRLQIHGQEPESVGT*PMLNPV
Trigger: AACCGGATTCAACATGGGCAATGTGCCTACACTTTC...AGGTTCTTGACCGTGAATCTGGAGCCGTTTGAGTTCACAAGAGTCTCTACTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS-3UTR CAA 90 bp AGTTTCTCACCTGGCAGCTTCTCCGGATTTCTTTGTTGCTTTCATAATCGCTTCCTCTCTGCAGAGCGTTaGTGTTGTACTGGTCTGTCG +
Preference number: 5 (lower is better)
Translates to: SFSPGSFSGFLCCFHNRFLSAER*CCTGLS
Trigger: CGACAGACCAGTACAACACAAACGCTCTGCAGAGAG...GAAGCGATTATGAAAGCAACAAAGAAATCCGGAGAAGCTGCCAGGTGAGAAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS-3UTR CAA 90 bp CACGTGAGCACTGTCACCCCAAGTAGAGACTCTTGTGAACTCAAACGGCTCCAGCTGGATTATATATGTTaGACGAGTAACCAAGCCTTG +
Preference number: 5 (lower is better)
Translates to: HVSTVTPSRDSCELKRLQLDYIC*TSNQAL
Trigger: CAAGGCTTGGTTACTCGTCAAACATATATAATCCAG...CTGGAGCCGTTTGAGTTCACAAGAGTCTCTACTTGGGGTGACAGTGCTCACGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR CAA 90 bp CCAAGTAGAGACTCTTGTGAACTCAAACGGCTCCAGATTCACGGTCAAGAACCTCAAAGATTGACAAGGTaGTGGACTGTGTCCATCAGC +
Preference number: 5 (lower is better)
Translates to: PSRDSCELKRLQIHGQEPQRLTR*WTVSIS
Trigger: GCTGATGGACACAGTCCACAACCTTGTCAATCTTTG...AGGTTCTTGACCGTGAATCTGGAGCCGTTTGAGTTCACAAGAGTCTCTACTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR CAA 90 bp AGTAGAGACTCTTGTGAACTCAAACGGCTCCAGATTCACGGTCAAGAACCTTGGCAAAGATTGACAAGGTaGTGGACTGTGTCCATCAGC +
Preference number: 5 (lower is better)
Translates to: SRDSCELKRLQIHGQEPWQRLTR*WTVSIS
Trigger: GCTGATGGACACAGTCCACAACCTTGTCAATCTTTG...CCAAGGTTCTTGACCGTGAATCTGGAGCCGTTTGAGTTCACAAGAGTCTCTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR CAA 90 bp CACGTGAGCACTGTCACCCCAAGTAGAGACTCTTGTGAACTCAAACGGCTCCAGCCATTGACATCCATATaGCAAAACACCTTTTTGGGT +
Preference number: 5 (lower is better)
Translates to: HVSTVTPSRDSCELKRLQPLTSI*QNTFLG
Trigger: ACCCAAAAAGGTGTTTTGCAATATGGATGTCAATGG...CTGGAGCCGTTTGAGTTCACAAGAGTCTCTACTTGGGGTGACAGTGCTCACGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR CAA 90 bp CACGTGAGCACTGTCACCCCAAGTAGAGACTCTTGTGAACTCAAACGGCTCCAGAACATGAGGGCACATTaGCACATACAGTTGTCATTA +
Preference number: 5 (lower is better)
Translates to: HVSTVTPSRDSCELKRLQNMRAH*HIQLSL
Trigger: TAATGACAACTGTATGTGCAAATGTGCCCTCATGTT...CTGGAGCCGTTTGAGTTCACAAGAGTCTCTACTTGGGGTGACAGTGCTCACGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR CAA 90 bp CGACAGTCAGTGGAGTTTTCTATAGTCGAGCCACGTGAGCACTGTCACCCCAAGGGAAGGGAGACAATATaGTTTGCTTCTGAAGTTTTC +
Preference number: 5 (lower is better)
Translates to: RQSVEFSIVEPREHCHPKGRETI*FASEVF
Trigger: GAAAACTTCAGAAGCAAACAATATTGTCTCCCTTCC...CTTGGGGTGACAGTGCTCACGTGGCTCGACTATAGAAAACTCCACTGACTGTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR CAA 90 bp CACGTGAGCACTGTCACCCCAAGTAGAGACTCTTGTGAACTCAAACGGCTCCAGCATAACTACCACTTATaGCTGGAAGGGAGACAATAT +
Preference number: 5 (lower is better)
Translates to: HVSTVTPSRDSCELKRLQHNYHL*LEGRQY
Trigger: ATATTGTCTCCCTTCCAGCAATAAGTGGTAGTTATG...CTGGAGCCGTTTGAGTTCACAAGAGTCTCTACTTGGGGTGACAGTGCTCACGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR CAA 90 bp CGACAGTCAGTGGAGTTTTCTATAGTCGAGCCACGTGAGCACTGTCACCCCAAGTCTACCACACACTTATaGTCCATGTACTACAGTTCA +
Preference number: 5 (lower is better)
Translates to: RQSVEFSIVEPREHCHPKSTTHL*SMYYSS
Trigger: TGAACTGTAGTACATGGACAATAAGTGTGTGGTAGA...CTTGGGGTGACAGTGCTCACGTGGCTCGACTATAGAAAACTCCACTGACTGTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS-3UTR CAA 90 bp CACGTGAGCACTGTCACCCCAAGTAGAGACTCTTGTGAACTCAAACGGCTCCAGATCAAGTCACCAAGTTaGAAACTGGTATTGCTACCT +
Preference number: 5 (lower is better)
Translates to: HVSTVTPSRDSCELKRLQIKSPS*KLVLLP
Trigger: AGGTAGCAATACCAGTTTCAAACTTGGTGACTTGAT...CTGGAGCCGTTTGAGTTCACAAGAGTCTCTACTTGGGGTGACAGTGCTCACGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS TCA 90 bp GGTCTGTCGTACTCTCACGACAGTTGCCATCGTGTTCTGGAAGAATaGAAGTGTAGGCACATTGCCCATGTTGAATCCGGTTATATCTTC +
Preference number: 5 (lower is better)
Translates to: GLSYSHDSCHRVLEE*KCRHIAHVESGYIF
Trigger: GAAGATATAACCGGATTCAACATGGGCAATGTGCCTACACTTTCATTCTTCCAGAACACGATGGCAACTGTCGTGAGAGTACGACAGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS-3UTR CAA 90 bp TCTGGCTACCATAGTTCCAAAATAAGGTCCAGTAGTAGTTTGAAGCACAGCAAGCTCTCTGCAGAGCGTTaGTGTTGTACTGGTCTGTCG +
Preference number: 5 (lower is better)
Translates to: SGYHSSKIRSSSSLKHSKLSAER*CCTGLS
Trigger: CGACAGACCAGTACAACACAAACGCTCTGCAGAGAG...CTTGCTGTGCTTCAAACTACTACTGGACCTTATTTTGGAACTATGGTAGCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS-3UTR CAA 90 bp ACTCTTGTGAACTCAAACGGCTCCAGATTCACGGTCAAGAACCTTGGTGACTTCACGAGTAACCAAGCCTaGAAGGTTCTCTTTCTCTTC +
Preference number: 5 (lower is better)
Translates to: TLVNSNGSRFTVKNLGDFTSNQA*KVLFLF
Trigger: GAAGAGAAAGAGAACCTTCAAGGCTTGGTTACTCGT...GAAGTCACCAAGGTTCTTGACCGTGAATCTGGAGCCGTTTGAGTTCACAAGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR CAA 90 bp ACTCTTGTGAACTCAAACGGCTCCAGATTCACGGTCAAGAACCTTGGTGACTTCAACATTCCATTTAGATaGGAGGGGCCACAAGCATCA +
Preference number: 5 (lower is better)
Translates to: TLVNSNGSRFTVKNLGDFNIPFR*EGPQAS
Trigger: TGATGCTTGTGGCCCCTCCAATCTAAATGGAATGTT...GAAGTCACCAAGGTTCTTGACCGTGAATCTGGAGCCGTTTGAGTTCACAAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR CAA 90 bp CCAGATTCACGGTCAAGAACCTTGGTGACTTCACATAACTACCACTTATTGCTGAGGTCCAGTAGTAGTTaGAAGCACAGCAAGCTCAGC +
Preference number: 5 (lower is better)
Translates to: PDSRSRTLVTSHNYHLLLRSSSS*KHSKLS
Trigger: GCTGAGCTTGCTGTGCTTCAAACTACTACTGGACCT...CAGCAATAAGTGGTAGTTATGTGAAGTCACCAAGGTTCTTGACCGTGAATCTGG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR CAA 90 bp CACGTGAGCACTGTCACCCCAAGTAGAGACTCTTGTGAACTCAAACGGCTCCAGAGGATTATGGCAGGCTaGTTTCTATTCTTCATGTAT +
Preference number: 5 (lower is better)
Translates to: HVSTVTPSRDSCELKRLQRIMAG*FLFFMY
Trigger: ATACATGAAGAATAGAAACAAGCCTGCCATAATCCT...CTGGAGCCGTTTGAGTTCACAAGAGTCTCTACTTGGGGTGACAGTGCTCACGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS-3UTR CAA 90 bp CCAAGTAGAGACTCTTGTGAACTCAAACGGCTCCAGATTCACGGTCAAGAACCTCTTTCACAAGATGACTaGACAGGAATGCATGAGTGT +
Preference number: 5 (lower is better)
Translates to: PSRDSCELKRLQIHGQEPLSQDD*TGMHEC
Trigger: ACACTCATGCATTCCTGTCAAGTCATCTTGTGAAAG...AGGTTCTTGACCGTGAATCTGGAGCCGTTTGAGTTCACAAGAGTCTCTACTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297450.7
CDS-3UTR CAA 90 bp AAAATAAGGTCCAGTAGTAGTTTGAAGCACAGCAAGCTCAGCAGTTTCTTCCCTTGCCTCTCGCAAAACTaGCTCCTTTCTTCTGACCTC +
Preference number: 5 (lower is better)
Translates to: KIRSSSSLKHSKLSSFFPCLSQN*LLSSDL
Trigger: GAGGTCAGAAGAAAGGAGCAAGTTTTGCGAGAGGCA...AGGGAAGAAACTGCTGAGCTTGCTGTGCTTCAAACTACTACTGGACCTTATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS-3UTR CAA 90 bp CCAGATTCACGGTCAAGAACCTTGGTGACTTCACATAACTACCACTTATTGCTGGAAAGTGTAGGCACATaGCCCATGTTGAATCCGGTT +
Preference number: 5 (lower is better)
Translates to: PDSRSRTLVTSHNYHLLLESVGT*PMLNPV
Trigger: AACCGGATTCAACATGGGCAATGTGCCTACACTTTC...CAGCAATAAGTGGTAGTTATGTGAAGTCACCAAGGTTCTTGACCGTGAATCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS-3UTR CAA 90 bp AGTAGAGACTCTTGTGAACTCAAACGGCTCCAGATTCACGGTCAAGAACCTTGGCAGTTTTCCATGGTTTaGTCCCGCAGTATAGAACAT +
Preference number: 5 (lower is better)
Translates to: SRDSCELKRLQIHGQEPWQFSMV*SRSIEH
Trigger: ATGTTCTATACTGCGGGACAAAACCATGGAAAACTG...CCAAGGTTCTTGACCGTGAATCTGGAGCCGTTTGAGTTCACAAGAGTCTCTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS GCA 90 bp GTCATTGTACTGCCAGCACACTCCTTCCGTGCCTCTCGCAAAACTTaGTCCTTTCTTCTGACCTCTAAAACTAGTTCTTTATTTCAGGTA +
Preference number: 5 (lower is better)
Translates to: VIVLPAHSFRASRKT*SFLLTSKTSSLFQV
Trigger: TACCTGAAATAAAGAACTAGTTTTAGAGGTCAGAAGAAAGGAGCAAGTTTTGCGAGAGGCACGGAAGGAGTGTGCTGGCAGTACAATGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS-3UTR CAA 90 bp AGAACCTTGGTGACTTCACATAACTACCACTTATTGCTGGAAGGGAGACAATATGTACTCTCACGACAGTaGCCATCGTGTTCTGGAAGA +
Preference number: 5 (lower is better)
Translates to: RTLVTSHNYHLLLEGRQYVLSRQ*PSCSGR
Trigger: TCTTCCAGAACACGATGGCAACTGTCGTGAGAGTAC...ATATTGTCTCCCTTCCAGCAATAAGTGGTAGTTATGTGAAGTCACCAAGGTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS-3UTR CAA 90 bp GAAGTTTTTAGAAGGAGAGGCTTACCTGCTATGAAGAAGCCACCAAGAATAGAATGCAGAGCGTTTGTGTaGTACTGGTCTGTCGTACTC +
Preference number: 5 (lower is better)
Translates to: EVFRRRGLPAMKKPPRIECRAFV*YWSVVL
Trigger: GAGTACGACAGACCAGTACAACACAAACGCTCTGCA...TTCTATTCTTGGTGGCTTCTTCATAGCAGGTAAGCCTCTCCTTCTAAAAACTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS-3UTR CAA 90 bp CCAGATTCACGGTCAAGAACCTTGGTGACTTCACATAACTACCACTTATTGCTGACGAGTAACCAAGCCTaGAAGGTTCTCTTTCTCTTC +
Preference number: 5 (lower is better)
Translates to: PDSRSRTLVTSHNYHLLLTSNQA*KVLFLF
Trigger: GAAGAGAAAGAGAACCTTCAAGGCTTGGTTACTCGT...CAGCAATAAGTGGTAGTTATGTGAAGTCACCAAGGTTCTTGACCGTGAATCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR CAA 90 bp CATAGTTCCAAAATAAGGTCCAGTAGTAGTTTGAAGCACAGCAAGCTCAGCAGTCAAAGATTGACAAGGTaGTGGACTGTGTCCATCAGC +
Preference number: 5 (lower is better)
Translates to: HSSKIRSSSSLKHSKLSSQRLTR*WTVSIS
Trigger: GCTGATGGACACAGTCCACAACCTTGTCAATCTTTG...ACTGCTGAGCTTGCTGTGCTTCAAACTACTACTGGACCTTATTTTGGAACTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR CAA 90 bp TACCATAGTTCCAAAATAAGGTCCAGTAGTAGTTTGAAGCACAGCAAGCTCAGCCAAAGATTGACAAGGTaGTGGACTGTGTCCATCAGC +
Preference number: 5 (lower is better)
Translates to: YHSSKIRSSSSLKHSKLSQRLTR*WTVSIS
Trigger: GCTGATGGACACAGTCCACAACCTTGTCAATCTTTG...GCTGAGCTTGCTGTGCTTCAAACTACTACTGGACCTTATTTTGGAACTATGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR CAA 90 bp CATAGTTCCAAAATAAGGTCCAGTAGTAGTTTGAAGCACAGCAAGCTCAGCAGTGTCCAACCTCCCCCATaGACATCCATATTGCAAAAC +
Preference number: 5 (lower is better)
Translates to: HSSKIRSSSSLKHSKLSSVQPPP*TSILQN
Trigger: GTTTTGCAATATGGATGTCAATGGGGGAGGTTGGAC...ACTGCTGAGCTTGCTGTGCTTCAAACTACTACTGGACCTTATTTTGGAACTATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR CAA 90 bp TCTGGCTACCATAGTTCCAAAATAAGGTCCAGTAGTAGTTTGAAGCACAGCAAGGTCCAACCTCCCCCATaGACATCCATATTGCAAAAC +
Preference number: 5 (lower is better)
Translates to: SGYHSSKIRSSSSLKHSKVQPPP*TSILQN
Trigger: GTTTTGCAATATGGATGTCAATGGGGGAGGTTGGAC...CTTGCTGTGCTTCAAACTACTACTGGACCTTATTTTGGAACTATGGTAGCCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR CAA 90 bp CCAGATTCACGGTCAAGAACCTTGGTGACTTCACATAACTACCACTTATTGCTGTCCATCTTCACGATGTaGTATTACAGTCCAACCTCC +
Preference number: 5 (lower is better)
Translates to: PDSRSRTLVTSHNYHLLLSIFTM*YYSPTS
Trigger: GGAGGTTGGACTGTAATACAACATCGTGAAGATGGA...CAGCAATAAGTGGTAGTTATGTGAAGTCACCAAGGTTCTTGACCGTGAATCTGG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR CAA 90 bp AGTTTCTCACCTGGCAGCTTCTCCGGATTTCTTTGTTGCTTTCATAATCGCTTCTCCATCTTCACGATGTaGTATTACAGTCCAACCTCC +
Preference number: 5 (lower is better)
Translates to: SFSPGSFSGFLCCFHNRFSIFTM*YYSPTS
Trigger: GGAGGTTGGACTGTAATACAACATCGTGAAGATGGA...GAAGCGATTATGAAAGCAACAAAGAAATCCGGAGAAGCTGCCAGGTGAGAAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR CAA 90 bp GTAGAGACTCTTGTGAACTCAAACGGCTCCAGATTCACGGTCAAGAACCTTGGTAACATGAGGGCACATTaGCACATACAGTTGTCATTA +
Preference number: 5 (lower is better)
Translates to: VETLVNSNGSRFTVKNLGNMRAH*HIQLSL
Trigger: TAATGACAACTGTATGTGCAAATGTGCCCTCATGTT...ACCAAGGTTCTTGACCGTGAATCTGGAGCCGTTTGAGTTCACAAGAGTCTCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR CAA 90 bp AGTAGAGACTCTTGTGAACTCAAACGGCTCCAGATTCACGGTCAAGAACCTTGGAACATGAGGGCACATTaGCACATACAGTTGTCATTA +
Preference number: 5 (lower is better)
Translates to: SRDSCELKRLQIHGQEPWNMRAH*HIQLSL
Trigger: TAATGACAACTGTATGTGCAAATGTGCCCTCATGTT...CCAAGGTTCTTGACCGTGAATCTGGAGCCGTTTGAGTTCACAAGAGTCTCTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS TCA 90 bp TCTTCATTAACCCTAGGAATTGACTCACCTCCAAGATTGTACATTTaGAATGTTGATTCCTGTCCCAGTAGTCCCCACCACCACTATTCC +
Preference number: 5 (lower is better)
Translates to: SSLTLGIDSPPRLYI*NVDSCPSSPHHHYS
Trigger: GGAATAGTGGTGGTGGGGACTACTGGGACAGGAATCAACATTTCAAATGTACAATCTTGGAGGTGAGTCAATTCCTAGGGTTAATGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522400.1
CDS-3UTR CAA 90 bp TCTGGCTACCATAGTTCCAAAATAAGGTCCAGTAGTAGTTTGAAGCACAGCAAGGGTAAAACTGCTTGTTaGTTTGACTCTTTCCCCCTC +
Preference number: 5 (lower is better)
Translates to: SGYHSSKIRSSSSLKHSKGKTAC*FDSFPL
Trigger: GAGGGGGAAAGAGTCAAACAAACAAGCAGTTTTACC...CTTGCTGTGCTTCAAACTACTACTGGACCTTATTTTGGAACTATGGTAGCCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS-3UTR CAA 90 bp CATAGTTCCAAAATAAGGTCCAGTAGTAGTTTGAAGCACAGCAAGCTCAGCAGTAAAGGAAAACTGTCATaGTACTGCCAGCACACTCCT +
Preference number: 5 (lower is better)
Translates to: HSSKIRSSSSLKHSKLSSKGKLS*YCQHTP
Trigger: AGGAGTGTGCTGGCAGTACAATGACAGTTTTCCTTT...ACTGCTGAGCTTGCTGTGCTTCAAACTACTACTGGACCTTATTTTGGAACTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS-3UTR CAA 90 bp AGTTCCAAAATAAGGTCCAGTAGTAGTTTGAAGCACAGCAAGCTCAGCAGTTTCACGAGTAACCAAGCCTaGAAGGTTCTCTTTCTCTTC +
Preference number: 5 (lower is better)
Translates to: SSKIRSSSSLKHSKLSSFTSNQA*KVLFLF
Trigger: GAAGAGAAAGAGAACCTTCAAGGCTTGGTTACTCGT...GAAACTGCTGAGCTTGCTGTGCTTCAAACTACTACTGGACCTTATTTTGGAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR CAA 90 bp AGAACCTTGGTGACTTCACATAACTACCACTTATTGCTGGAAGGGAGACAATATGTCCAACCTCCCCCATaGACATCCATATTGCAAAAC +
Preference number: 5 (lower is better)
Translates to: RTLVTSHNYHLLLEGRQYVQPPP*TSILQN
Trigger: GTTTTGCAATATGGATGTCAATGGGGGAGGTTGGAC...ATATTGTCTCCCTTCCAGCAATAAGTGGTAGTTATGTGAAGTCACCAAGGTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR CAA 90 bp TACCATAGTTCCAAAATAAGGTCCAGTAGTAGTTTGAAGCACAGCAAGCTCAGCTCCATCTTCACGATGTaGTATTACAGTCCAACCTCC +
Preference number: 5 (lower is better)
Translates to: YHSSKIRSSSSLKHSKLSSIFTM*YYSPTS
Trigger: GGAGGTTGGACTGTAATACAACATCGTGAAGATGGA...GCTGAGCTTGCTGTGCTTCAAACTACTACTGGACCTTATTTTGGAACTATGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR CAA 90 bp AGTTCCAAAATAAGGTCCAGTAGTAGTTTGAAGCACAGCAAGCTCAGCAGTTTCTCACGGTCAAGAACCTaGGTGACTTCACATAACTAC +
Preference number: 5 (lower is better)
Translates to: SSKIRSSSSLKHSKLSSFSRSRT*VTSHNY
Trigger: GTAGTTATGTGAAGTCACCAAGGTTCTTGACCGTGA...GAAACTGCTGAGCTTGCTGTGCTTCAAACTACTACTGGACCTTATTTTGGAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR CAA 90 bp AGTAGAGACTCTTGTGAACTCAAACGGCTCCAGATTCACGGTCAAGAACCTTGGAGGATTATGGCAGGCTaGTTTCTATTCTTCATGTAT +
Preference number: 5 (lower is better)
Translates to: SRDSCELKRLQIHGQEPWRIMAG*FLFFMY
Trigger: ATACATGAAGAATAGAAACAAGCCTGCCATAATCCT...CCAAGGTTCTTGACCGTGAATCTGGAGCCGTTTGAGTTCACAAGAGTCTCTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS-3UTR CAA 90 bp ACCTTGGTGACTTCACATAACTACCACTTATTGCTGGAAGGGAGACAATATTGTGGTAAAACTGCTTGTTaGTTTGACTCTTTCCCCCTC +
Preference number: 5 (lower is better)
Translates to: TLVTSHNYHLLLEGRQYCGKTAC*FDSFPL
Trigger: GAGGGGGAAAGAGTCAAACAAACAAGCAGTTTTACC...ACAATATTGTCTCCCTTCCAGCAATAAGTGGTAGTTATGTGAAGTCACCAAGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS-3UTR CAA 90 bp AGAACCTTGGTGACTTCACATAACTACCACTTATTGCTGGAAGGGAGACAATATGGCACATTGCCCATGTaGAATCCGGTTATATCTTCT +
Preference number: 5 (lower is better)
Translates to: RTLVTSHNYHLLLEGRQYGTLPM*NPVISS
Trigger: AGAAGATATAACCGGATTCAACATGGGCAATGTGCC...ATATTGTCTCCCTTCCAGCAATAAGTGGTAGTTATGTGAAGTCACCAAGGTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS-3UTR CAA 90 bp TCTGGCTACCATAGTTCCAAAATAAGGTCCAGTAGTAGTTTGAAGCACAGCAAGCACATGTTCCAGATGTaGAAGTTTCTGGGAAGAGAA +
Preference number: 5 (lower is better)
Translates to: SGYHSSKIRSSSSLKHSKHMFQM*KFLGRE
Trigger: TTCTCTTCCCAGAAACTTCAACATCTGGAACATGTG...CTTGCTGTGCTTCAAACTACTACTGGACCTTATTTTGGAACTATGGTAGCCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS-3UTR CAA 90 bp ACCTTGGTGACTTCACATAACTACCACTTATTGCTGGAAGGGAGACAATATTGTACGAGTAACCAAGCCTaGAAGGTTCTCTTTCTCTTC +
Preference number: 5 (lower is better)
Translates to: TLVTSHNYHLLLEGRQYCTSNQA*KVLFLF
Trigger: GAAGAGAAAGAGAACCTTCAAGGCTTGGTTACTCGT...ACAATATTGTCTCCCTTCCAGCAATAAGTGGTAGTTATGTGAAGTCACCAAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR CAA 90 bp CCAGATTCACGGTCAAGAACCTTGGTGACTTCACATAACTACCACTTATTGCTGCCATTGACATCCATATaGCAAAACACCTTTTTGGGT +
Preference number: 5 (lower is better)
Translates to: PDSRSRTLVTSHNYHLLLPLTSI*QNTFLG
Trigger: ACCCAAAAAGGTGTTTTGCAATATGGATGTCAATGG...CAGCAATAAGTGGTAGTTATGTGAAGTCACCAAGGTTCTTGACCGTGAATCTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR CAA 90 bp AGAACCTTGGTGACTTCACATAACTACCACTTATTGCTGGAAGGGAGACAATATAACATTCCATTTAGATaGGAGGGGCCACAAGCATCA +
Preference number: 5 (lower is better)
Translates to: RTLVTSHNYHLLLEGRQYNIPFR*EGPQAS
Trigger: TGATGCTTGTGGCCCCTCCAATCTAAATGGAATGTT...ATATTGTCTCCCTTCCAGCAATAAGTGGTAGTTATGTGAAGTCACCAAGGTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR CAA 90 bp CCAGATTCACGGTCAAGAACCTTGGTGACTTCACATAACTACCACTTATTGCTGCATAACTACCACTTATaGCTGGAAGGGAGACAATAT +
Preference number: 5 (lower is better)
Translates to: PDSRSRTLVTSHNYHLLLHNYHL*LEGRQY
Trigger: ATATTGTCTCCCTTCCAGCAATAAGTGGTAGTTATG...CAGCAATAAGTGGTAGTTATGTGAAGTCACCAAGGTTCTTGACCGTGAATCTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR CAA 90 bp ACCTTGGTGACTTCACATAACTACCACTTATTGCTGGAAGGGAGACAATATTGTTCACGGTCAAGAACCTaGGTGACTTCACATAACTAC +
Preference number: 5 (lower is better)
Translates to: TLVTSHNYHLLLEGRQYCSRSRT*VTSHNY
Trigger: GTAGTTATGTGAAGTCACCAAGGTTCTTGACCGTGA...ACAATATTGTCTCCCTTCCAGCAATAAGTGGTAGTTATGTGAAGTCACCAAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR CAA 90 bp TTTCAAACAGTTTCTCACCTGGCAGCTTCTCCGGATTTCTTTGTTGCTTTCATATCACGGTCAAGAACCTaGGTGACTTCACATAACTAC +
Preference number: 5 (lower is better)
Translates to: FQTVSHLAASPDFFVAFISRSRT*VTSHNY
Trigger: GTAGTTATGTGAAGTCACCAAGGTTCTTGACCGTGA...TATGAAAGCAACAAAGAAATCCGGAGAAGCTGCCAGGTGAGAAACTGTTTGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR CAA 90 bp AGTTCCAAAATAAGGTCCAGTAGTAGTTTGAAGCACAGCAAGCTCAGCAGTTTCTTTACTGTCATAACCTaGGACACTTACAGGCAGAGA +
Preference number: 5 (lower is better)
Translates to: SSKIRSSSSLKHSKLSSFFTVIT*DTYRQR
Trigger: TCTCTGCCTGTAAGTGTCCAAGGTTATGACAGTAAA...GAAACTGCTGAGCTTGCTGTGCTTCAAACTACTACTGGACCTTATTTTGGAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS-3UTR CAA 90 bp AAAATAAGGTCCAGTAGTAGTTTGAAGCACAGCAAGCTCAGCAGTTTCTTCCCTTTTACTGTCATAACCTaGGACACTTACAGGCAGAGA +
Preference number: 5 (lower is better)
Translates to: KIRSSSSLKHSKLSSFFPFTVIT*DTYRQR
Trigger: TCTCTGCCTGTAAGTGTCCAAGGTTATGACAGTAAA...AGGGAAGAAACTGCTGAGCTTGCTGTGCTTCAAACTACTACTGGACCTTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS-3UTR CAA 90 bp TCTGGCTACCATAGTTCCAAAATAAGGTCCAGTAGTAGTTTGAAGCACAGCAAGAGTTTGAAACTGGTATaGCTACCTTGCCAACAACTG +
Preference number: 5 (lower is better)
Translates to: SGYHSSKIRSSSSLKHSKSLKLV*LPCQQL
Trigger: CAGTTGTTGGCAAGGTAGCAATACCAGTTTCAAACT...CTTGCTGTGCTTCAAACTACTACTGGACCTTATTTTGGAACTATGGTAGCCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS-3UTR CAA 90 bp CATAGTTCCAAAATAAGGTCCAGTAGTAGTTTGAAGCACAGCAAGCTCAGCAGTCTGGATTATATATGTTaGACGAGTAACCAAGCCTTG +
Preference number: 5 (lower is better)
Translates to: HSSKIRSSSSLKHSKLSSLDYIC*TSNQAL
Trigger: CAAGGCTTGGTTACTCGTCAAACATATATAATCCAG...ACTGCTGAGCTTGCTGTGCTTCAAACTACTACTGGACCTTATTTTGGAACTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR CAA 90 bp CCAGATTCACGGTCAAGAACCTTGGTGACTTCACATAACTACCACTTATTGCTGGGGAGACAATATTGTTaGCTTCTGAAGTTTTCAAAC +
Preference number: 5 (lower is better)
Translates to: PDSRSRTLVTSHNYHLLLGRQYC*LLKFSN
Trigger: GTTTGAAAACTTCAGAAGCAAACAATATTGTCTCCC...CAGCAATAAGTGGTAGTTATGTGAAGTCACCAAGGTTCTTGACCGTGAATCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR CAA 90 bp CATAGTTCCAAAATAAGGTCCAGTAGTAGTTTGAAGCACAGCAAGCTCAGCAGTGGAAGGGAGACAATATaGTTTGCTTCTGAAGTTTTC +
Preference number: 5 (lower is better)
Translates to: HSSKIRSSSSLKHSKLSSGRETI*FASEVF
Trigger: GAAAACTTCAGAAGCAAACAATATTGTCTCCCTTCC...ACTGCTGAGCTTGCTGTGCTTCAAACTACTACTGGACCTTATTTTGGAACTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR CAA 90 bp CACTTATTGCTGGAAGGGAGACAATATTGTTTGCTTCTGAAGTTTTCAAACAGTAAAGGAAAACTGTCATaGTACTGCCAGCACACTCCT +
Preference number: 5 (lower is better)
Translates to: HLLLEGRQYCLLLKFSNSKGKLS*YCQHTP
Trigger: AGGAGTGTGCTGGCAGTACAATGACAGTTTTCCTTT...ACTGTTTGAAAACTTCAGAAGCAAACAATATTGTCTCCCTTCCAGCAATAAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS-3UTR CAA 90 bp TTTCAAACAGTTTCTCACCTGGCAGCTTCTCCGGATTTCTTTGTTGCTTTCATACTGGATTATATATGTTaGACGAGTAACCAAGCCTTG +
Preference number: 5 (lower is better)
Translates to: FQTVSHLAASPDFFVAFILDYIC*TSNQAL
Trigger: CAAGGCTTGGTTACTCGTCAAACATATATAATCCAG...TATGAAAGCAACAAAGAAATCCGGAGAAGCTGCCAGGTGAGAAACTGTTTGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR CAA 90 bp TTTCAAACAGTTTCTCACCTGGCAGCTTCTCCGGATTTCTTTGTTGCTTTCATAAACATGAGGGCACATTaGCACATACAGTTGTCATTA +
Preference number: 5 (lower is better)
Translates to: FQTVSHLAASPDFFVAFINMRAH*HIQLSL
Trigger: TAATGACAACTGTATGTGCAAATGTGCCCTCATGTT...TATGAAAGCAACAAAGAAATCCGGAGAAGCTGCCAGGTGAGAAACTGTTTGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR CAA 90 bp TCTGGCTACCATAGTTCCAAAATAAGGTCCAGTAGTAGTTTGAAGCACAGCAAGGGGAGACAATATTGTTaGCTTCTGAAGTTTTCAAAC +
Preference number: 5 (lower is better)
Translates to: SGYHSSKIRSSSSLKHSKGRQYC*LLKFSN
Trigger: GTTTGAAAACTTCAGAAGCAAACAATATTGTCTCCC...CTTGCTGTGCTTCAAACTACTACTGGACCTTATTTTGGAACTATGGTAGCCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR CAA 90 bp TTTCAAACAGTTTCTCACCTGGCAGCTTCTCCGGATTTCTTTGTTGCTTTCATAGGAAGGGAGACAATATaGTTTGCTTCTGAAGTTTTC +
Preference number: 5 (lower is better)
Translates to: FQTVSHLAASPDFFVAFIGRETI*FASEVF
Trigger: GAAAACTTCAGAAGCAAACAATATTGTCTCCCTTCC...TATGAAAGCAACAAAGAAATCCGGAGAAGCTGCCAGGTGAGAAACTGTTTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR CAA 90 bp AGAACCTTGGTGACTTCACATAACTACCACTTATTGCTGGAAGGGAGACAATATGGAAGGGAGACAATATaGTTTGCTTCTGAAGTTTTC +
Preference number: 5 (lower is better)
Translates to: RTLVTSHNYHLLLEGRQYGRETI*FASEVF
Trigger: GAAAACTTCAGAAGCAAACAATATTGTCTCCCTTCC...ATATTGTCTCCCTTCCAGCAATAAGTGGTAGTTATGTGAAGTCACCAAGGTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS CCA 90 bp AGATTTCATTTGTCTGTTGAAGAAGTTGCTTCTCTAGCTTGTAGGTaGATAATGAATTCTCCAGCAGCTGTATCTCAAGTCGAGAAGTTT +
Preference number: 5 (lower is better)
Translates to: RFHLSVEEVASLACR*IMNSPAAVSQVEKF
Trigger: AAACTTCTCGACTTGAGATACAGCTGCTGGAGAATTCATTATCCACCTACAAGCTAGAGAAGCAACTTCTTCAACAGACAAATGAAATCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR CAA 90 bp CTTATTGCTGGAAGGGAGACAATATTGTTTGCTTCTGAAGTTTTCAAACAGTTTAACATTCCATTTAGATaGGAGGGGCCACAAGCATCA +
Preference number: 5 (lower is better)
Translates to: LIAGRETILFASEVFKQFNIPFR*EGPQAS
Trigger: TGATGCTTGTGGCCCCTCCAATCTAAATGGAATGTT...AAACTGTTTGAAAACTTCAGAAGCAAACAATATTGTCTCCCTTCCAGCAATAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR CAA 90 bp AGAACCTTGGTGACTTCACATAACTACCACTTATTGCTGGAAGGGAGACAATATGGGAGACAATATTGTTaGCTTCTGAAGTTTTCAAAC +
Preference number: 5 (lower is better)
Translates to: RTLVTSHNYHLLLEGRQYGRQYC*LLKFSN
Trigger: GTTTGAAAACTTCAGAAGCAAACAATATTGTCTCCC...ATATTGTCTCCCTTCCAGCAATAAGTGGTAGTTATGTGAAGTCACCAAGGTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR CAA 90 bp CACTTATTGCTGGAAGGGAGACAATATTGTTTGCTTCTGAAGTTTTCAAACAGTACTGGTATTGCTACCTaGCCAACAACTGTCTCTTTT +
Preference number: 5 (lower is better)
Translates to: HLLLEGRQYCLLLKFSNSTGIAT*PTTVSF
Trigger: AAAAGAGACAGTTGTTGGCAAGGTAGCAATACCAGT...ACTGTTTGAAAACTTCAGAAGCAAACAATATTGTCTCCCTTCCAGCAATAAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS GCA 90 bp ATGGATAAATTAATTTCACCTACATACACTGATAGCCTCAGTTTCTaGAGGGTGTTGCTTCTTCCTATGGCAACTACTTGGAATCAAAAT +
Preference number: 5 (lower is better)
Translates to: MDKLISPTYTDSLSF*RVLLLPMATTWNQN
Trigger: ATTTTGATTCCAAGTAGTTGCCATAGGAAGAAGCAACACCCTGCAGAAACTGAGGCTATCAGTGTATGTAGGTGAAATTAATTTATCCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520033.1
CDS-3UTR CAA 90 bp CTTATTGCTGGAAGGGAGACAATATTGTTTGCTTCTGAAGTTTTCAAACAGTTTCACATGTTCCAGATGTaGAAGTTTCTGGGAAGAGAA +
Preference number: 5 (lower is better)
Translates to: LIAGRETILFASEVFKQFHMFQM*KFLGRE
Trigger: TTCTCTTCCCAGAAACTTCAACATCTGGAACATGTG...AAACTGTTTGAAAACTTCAGAAGCAAACAATATTGTCTCCCTTCCAGCAATAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS-3UTR CAA 90 bp CACTTATTGCTGGAAGGGAGACAATATTGTTTGCTTCTGAAGTTTTCAAACAGTCTGGATTATATATGTTaGACGAGTAACCAAGCCTTG +
Preference number: 5 (lower is better)
Translates to: HLLLEGRQYCLLLKFSNSLDYIC*TSNQAL
Trigger: CAAGGCTTGGTTACTCGTCAAACATATATAATCCAG...ACTGTTTGAAAACTTCAGAAGCAAACAATATTGTCTCCCTTCCAGCAATAAGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR CAA 90 bp CACTTATTGCTGGAAGGGAGACAATATTGTTTGCTTCTGAAGTTTTCAAACAGTCCATTGACATCCATATaGCAAAACACCTTTTTGGGT +
Preference number: 5 (lower is better)
Translates to: HLLLEGRQYCLLLKFSNSPLTSI*QNTFLG
Trigger: ACCCAAAAAGGTGTTTTGCAATATGGATGTCAATGG...ACTGTTTGAAAACTTCAGAAGCAAACAATATTGTCTCCCTTCCAGCAATAAGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR CAA 90 bp CTTATTGCTGGAAGGGAGACAATATTGTTTGCTTCTGAAGTTTTCAAACAGTTTCCATTGACATCCATATaGCAAAACACCTTTTTGGGT +
Preference number: 5 (lower is better)
Translates to: LIAGRETILFASEVFKQFPLTSI*QNTFLG
Trigger: ACCCAAAAAGGTGTTTTGCAATATGGATGTCAATGG...AAACTGTTTGAAAACTTCAGAAGCAAACAATATTGTCTCCCTTCCAGCAATAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS-3UTR CAA 90 bp CTTATTGCTGGAAGGGAGACAATATTGTTTGCTTCTGAAGTTTTCAAACAGTTTGGGAGACAATATTGTTaGCTTCTGAAGTTTTCAAAC +
Preference number: 5 (lower is better)
Translates to: LIAGRETILFASEVFKQFGRQYC*LLKFSN
Trigger: GTTTGAAAACTTCAGAAGCAAACAATATTGTCTCCC...AAACTGTTTGAAAACTTCAGAAGCAAACAATATTGTCTCCCTTCCAGCAATAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS GCA 72 bp CTGGGTCTCAACATCTGTCAGCTTTCTGGTCTGCTCTaGAGTCTGAGAGAGGAGGCTGGTTCCTATCTCCAG +
Preference number: 6 (lower is better)
Translates to: LGLNICQLSGLL*SLREEAGSYLQ
Trigger: CTGGAGATAGGAACCAGCCTCCTCTCTCAGACTGCAGAGCAGACCAGAAAGCTGACAGATGTTGAGACCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS CAA 72 bp CCGGTTCCACGTGTGGAGCATCTCTCTGCAGAGCGTTaGTGTTGTACTGGTCTGTCGTACTCTCACGACAGT +
Preference number: 6 (lower is better)
Translates to: PVPRVEHLSAER*CCTGLSYSHDS
Trigger: ACTGTCGTGAGAGTACGACAGACCAGTACAACACAAACGCTCTGCAGAGAGATGCTCCACACGTGGAACCGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS GCA 72 bp TTCTCCCACTGTTTTCTGGACTTCGGCGCTGATTGCTaGACCCTATGTGAGTCAGAATGGCAGCGAGGAAAG +
Preference number: 6 (lower is better)
Translates to: FSHCFLDFGADC*TLCESEWQRGK
Trigger: CTTTCCTCGCTGCCATTCTGACTCACATAGGGTGCAGCAATCAGCGCCGAAGTCCAGAAAACAGTGGGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS GCA 72 bp ATCTTCTCCCACTGTTTTCTGGACTTCGGCGCTGATTaGTGCACCCTATGTGAGTCAGAATGGCAGCGAGGA +
Preference number: 6 (lower is better)
Translates to: IFSHCFLDFGAD*CTLCESEWQRG
Trigger: TCCTCGCTGCCATTCTGACTCACATAGGGTGCAGCAATCAGCGCCGAAGTCCAGAAAACAGTGGGAGAAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS CAA 72 bp TCCACGTGTGGAGCATCTCTCTGCAGAGCGTTTGTGTaGTACTGGTCTGTCGTACTCTCACGACAGTTGCCA +
Preference number: 6 (lower is better)
Translates to: STCGASLCRAFV*YWSVVLSRQLP
Trigger: TGGCAACTGTCGTGAGAGTACGACAGACCAGTACAACACAAACGCTCTGCAGAGAGATGCTCCACACGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS CAA 90 bp AAATCCGGTTCCACGTGTGGAGCATCTCTCTGCAGAGCGTTTGTGTaGTACTGGTCTGTCGTACTCTCACGACAGTTGCCATCGTGTTCT +
Preference number: 6 (lower is better)
Translates to: KSGSTCGASLCRAFV*YWSVVLSRQLPSCS
Trigger: AGAACACGATGGCAACTGTCGTGAGAGTACGACAGACCAGTACAACACAAACGCTCTGCAGAGAGATGCTCCACACGTGGAACCGGATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS CAA 90 bp AAGAGAAATCCGGTTCCACGTGTGGAGCATCTCTCTGCAGAGCGTTaGTGTTGTACTGGTCTGTCGTACTCTCACGACAGTTGCCATCGT +
Preference number: 6 (lower is better)
Translates to: KRNPVPRVEHLSAER*CCTGLSYSHDSCHR
Trigger: ACGATGGCAACTGTCGTGAGAGTACGACAGACCAGTACAACACAAACGCTCTGCAGAGAGATGCTCCACACGTGGAACCGGATTTCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS GCA 72 bp TTGTTTCCTCTCTGTGTGACCGTTCAGCATGGAGCCTaGCTGAGTCAGCTGCGTGTACATATTCTAGACCCT +
Preference number: 6 (lower is better)
Translates to: LFPLCVTVQHGA*LSQLRVHILDP
Trigger: AGGGTCTAGAATATGTACACGCAGCTGACTCAGGCAGGCTCCATGCTGAACGGTCACACAGAGAGGAAACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS GCA 72 bp GAAGAGAAATCCGGTTCCACGTGTGGAGCATCTCTCTaGAGAGCGTTTGTGTTGTACTGGTCTGTCGTACTC +
Preference number: 6 (lower is better)
Translates to: EEKSGSTCGASL*RAFVLYWSVVL
Trigger: GAGTACGACAGACCAGTACAACACAAACGCTCTGCAGAGAGATGCTCCACACGTGGAACCGGATTTCTCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS CCA 72 bp TGTGGAGCATCTCTCTGCAGAGCGTTTGTGTTGTACTaGTCTGTCGTACTCTCACGACAGTTGCCATCGTGT +
Preference number: 6 (lower is better)
Translates to: CGASLCRAFVLY*SVVLSRQLPSC
Trigger: ACACGATGGCAACTGTCGTGAGAGTACGACAGACCAGTACAACACAAACGCTCTGCAGAGAGATGCTCCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS CAA 72 bp GCCAAGCTGGAAGCAGGCAGCCTTTCACAAGATGACTaGACAGGAATGCATGAGTGTGCCCCTATACTAAGG +
Preference number: 6 (lower is better)
Translates to: AKLEAGSLSQDD*TGMHECAPILR
Trigger: CCTTAGTATAGGGGCACACTCATGCATTCCTGTCAAGTCATCTTGTGAAAGGCTGCCTGCTTCCAGCTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297450.7
CDS TCA 72 bp AAGGGTCCAAGATATACATGCCTACTTGTGGGCATATaGAATAGGACAACTCTCCTCCCAAGGCTCTCGCCC +
Preference number: 6 (lower is better)
Translates to: KGPRYTCLLVGI*NRTTLLPRLSP
Trigger: GGGCGAGAGCCTTGGGAGGAGAGTTGTCCTATTTCATATGCCCACAAGTAGGCATGTATATCTTGGACCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522400.1
CDS GCA 72 bp GAAAACTGTCATTGTACTGCCAGCACACTCCTTCCGTaGCTCTCGCAAAACTTGCTCCTTTCTTCTGACCTC +
Preference number: 6 (lower is better)
Translates to: ENCHCTASTLLP*LSQNLLLSSDL
Trigger: GAGGTCAGAAGAAAGGAGCAAGTTTTGCGAGAGGCACGGAAGGAGTGTGCTGGCAGTACAATGACAGTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS CAA 90 bp CACATCCAAGCCAAGCTGGAAGCAGGCAGCCTTTCACAAGATGACTaGACAGGAATGCATGAGTGTGCCCCTATACTAAGGATTGCTGAT +
Preference number: 6 (lower is better)
Translates to: HIQAKLEAGSLSQDD*TGMHECAPILRIAD
Trigger: ATCAGCAATCCTTAGTATAGGGGCACACTCATGCATTCCTGTCAAGTCATCTTGTGAAAGGCTGCCTGCTTCCAGCTTGGCTTGGATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297450.7
CDS CAA 90 bp CATGTACTTCCTCAGAGTGGAAGGGTCCAAGATATACATGCCTACTaGTGGGCATATGAAATAGGACAACTCTCCTCCCAAGGCTCTCGC +
Preference number: 6 (lower is better)
Translates to: HVLPQSGRVQDIHAY*WAYEIGQLSSQGSR
Trigger: GCGAGAGCCTTGGGAGGAGAGTTGTCCTATTTCATATGCCCACAAGTAGGCATGTATATCTTGGACCCTTCCACTCTGAGGAAGTACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522400.1
CDS CCA 72 bp TTGAAGTTTCTGGGAAGAGAAATCCGGTTCCACGTGTaGAGCATCTCTCTGCAGAGCGTTTGTGTTGTACTG +
Preference number: 6 (lower is better)
Translates to: LKFLGREIRFHV*SISLQSVCVVL
Trigger: CAGTACAACACAAACGCTCTGCAGAGAGATGCTCCACACGTGGAACCGGATTTCTCTTCCCAGAAACTTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS CCA 72 bp CAGAGTGGAAGGGTCCAAGATATACATGCCTACTTGTaGGCATATGAAATAGGACAACTCTCCTCCCAAGGC +
Preference number: 6 (lower is better)
Translates to: QSGRVQDIHAYL*AYEIGQLSSQG
Trigger: GCCTTGGGAGGAGAGTTGTCCTATTTCATATGCCCACAAGTAGGCATGTATATCTTGGACCCTTCCACTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522400.1
CDS CAA 90 bp GCCATCGTGTTCTGGAAGAATGAAAGTGTAGGCACATTGCCCATGTaGAATCCGGTTATATCTTCTCCCACTGTTTTCTGGACTTCGGCG +
Preference number: 6 (lower is better)
Translates to: AIVFWKNESVGTLPM*NPVISSPTVFWTSA
Trigger: CGCCGAAGTCCAGAAAACAGTGGGAGAAGATATAACCGGATTCAACATGGGCAATGTGCCTACACTTTCATTCTTCCAGAACACGATGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS TCA 72 bp TACTCTCACGACAGTTGCCATCGTGTTCTGGAAGAATaGAAGTGTAGGCACATTGCCCATGTTGAATCCGGT +
Preference number: 6 (lower is better)
Translates to: YSHDSCHRVLEE*KCRHIAHVESG
Trigger: ACCGGATTCAACATGGGCAATGTGCCTACACTTTCATTCTTCCAGAACACGATGGCAACTGTCGTGAGAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS TCA 72 bp GCTTCTCATCCTGTTCAGTTGCAAGACCAGAAAAGTTaGGGAAGGAGGTTTCCCTTCATGGAAGGTGATGGA +
Preference number: 6 (lower is better)
Translates to: ASHPVQLQDQKS*GRRFPFMEGDG
Trigger: TCCATCACCTTCCATGAAGGGAAACCTCCTTCCTCAACTTTTCTGGTCTTGCAACTGAACAGGATGAGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520033.1
CDS GCA 72 bp ATTTATGGTGACCCACAAATCATTTGCCCCCTTGCATaGCTTGCTTCTCATCCTGTTCAGTTGCAAGACCAG +
Preference number: 6 (lower is better)
Translates to: IYGDPQIICPLA*LASHPVQLQDQ
Trigger: CTGGTCTTGCAACTGAACAGGATGAGAAGCAAGGCATGCAAGGGGGCAAATGATTTGTGGGTCACCATAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520033.1
CDS CCA 72 bp AGATTTATTGTTTCCTCTCTGTGTGACCGTTCAGCATaGAGCCTGCCTGAGTCAGCTGCGTGTACATATTCT +
Preference number: 6 (lower is better)
Translates to: RFIVSSLCDRSA*SLPESAACTYS
Trigger: AGAATATGTACACGCAGCTGACTCAGGCAGGCTCCATGCTGAACGGTCACACAGAGAGGAAACAATAAATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS CCA 72 bp ATGTTGAATCCGGTTATATCTTCTCCCACTGTTTTCTaGACTTCGGCGCTGATTGCTGCACCCTATGTGAGT +
Preference number: 6 (lower is better)
Translates to: MLNPVISSPTVF*TSALIAAPYVS
Trigger: ACTCACATAGGGTGCAGCAATCAGCGCCGAAGTCCAGAAAACAGTGGGAGAAGATATAACCGGATTCAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS CAA 72 bp CCTCAGAGTGGAAGGGTCCAAGATATACATGCCTACTaGTGGGCATATGAAATAGGACAACTCTCCTCCCAA +
Preference number: 6 (lower is better)
Translates to: PQSGRVQDIHAY*WAYEIGQLSSQ
Trigger: TTGGGAGGAGAGTTGTCCTATTTCATATGCCCACAAGTAGGCATGTATATCTTGGACCCTTCCACTCTGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522400.1
CDS CAA 90 bp ACGACAGTTGCCATCGTGTTCTGGAAGAATGAAAGTGTAGGCACATaGCCCATGTTGAATCCGGTTATATCTTCTCCCACTGTTTTCTGG +
Preference number: 6 (lower is better)
Translates to: TTVAIVFWKNESVGT*PMLNPVISSPTVFW
Trigger: CCAGAAAACAGTGGGAGAAGATATAACCGGATTCAACATGGGCAATGTGCCTACACTTTCATTCTTCCAGAACACGATGGCAACTGTCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS TCA 72 bp TCTGCTGCAGATCTGCTATTTTCTCCCAGACCTCAGTaGGTTTTATTAAGGTTGCACATCCAAGCCAAGCTG +
Preference number: 6 (lower is better)
Translates to: SAADLLFSPRPQ*VLLRLHIQAKL
Trigger: CAGCTTGGCTTGGATGTGCAACCTTAATAAAACTCACTGAGGTCTGGGAGAAAATAGCAGATCTGCAGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297450.7
CDS CCA 72 bp ATTCAAAGAGCGAATTGTCCATGTACTTCCTCAGAGTaGAAGGGTCCAAGATATACATGCCTACTTGTGGGC +
Preference number: 6 (lower is better)
Translates to: IQRANCPCTSSE*KGPRYTCLLVG
Trigger: GCCCACAAGTAGGCATGTATATCTTGGACCCTTCCACTCTGAGGAAGTACATGGACAATTCGCTCTTTGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522400.1
CDS CAA 72 bp GCCATCGTGTTCTGGAAGAATGAAAGTGTAGGCACATaGCCCATGTTGAATCCGGTTATATCTTCTCCCACT +
Preference number: 6 (lower is better)
Translates to: AIVFWKNESVGT*PMLNPVISSPT
Trigger: AGTGGGAGAAGATATAACCGGATTCAACATGGGCAATGTGCCTACACTTTCATTCTTCCAGAACACGATGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS CAA 72 bp AAAAGCAGTGGCAAGAAATGTCATTCAAAGAGCGAATaGTCCATGTACTTCCTCAGAGTGGAAGGGTCCAAG +
Preference number: 6 (lower is better)
Translates to: KSSGKKCHSKSE*SMYFLRVEGSK
Trigger: CTTGGACCCTTCCACTCTGAGGAAGTACATGGACAATTCGCTCTTTGAATGACATTTCTTGCCACTGCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522400.1
CDS CAA 90 bp AACCACCATCCTCCTGTTAACATGAGGGCACATTTGCACATACAGTaGTCATTATCAGCATCTTTAGTGCTGAAATCAGCACCGTGTAAG +
Preference number: 6 (lower is better)
Translates to: NHHPPVNMRAHLHIQ*SLSASLVLKSAPCK
Trigger: CTTACACGGTGCTGATTTCAGCACTAAAGATGCTGATAATGACAACTGTATGTGCAAATGTGCCCTCATGTTAACAGGAGGATGGTGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000518386.5
ENST00000520052.1
ENST00000520734.5
CDS CAA 90 bp ATAACAGTTCCAGTATTTATGGTGACCCACAAATCATTTGCCCCCTaGCATGCCTTGCTTCTCATCCTGTTCAGTTGCAAGACCAGAAAA +
Preference number: 6 (lower is better)
Translates to: ITVPVFMVTHKSFAP*HALLLILFSCKTRK
Trigger: TTTTCTGGTCTTGCAACTGAACAGGATGAGAAGCAAGGCATGCAAGGGGGCAAATGATTTGTGGGTCACCATAAATACTGGAACTGTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520033.1
CDS TCA 72 bp TATCGTCGGAGAGCAATCACTGTAATTGATGTAGCATaGATGTGGCAGCTTGATTATTCAACGGGGACTATG +
Preference number: 6 (lower is better)
Translates to: YRRRAITVIDVA*MWQLDYSTGTM
Trigger: CATAGTCCCCGTTGAATAATCAAGCTGCCACATTCATGCTACATCAATTACAGTGATTGCTCTCCGACGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522400.1
CDS CAA 72 bp TTCTGGAAGAATGAAAGTGTAGGCACATTGCCCATGTaGAATCCGGTTATATCTTCTCCCACTGTTTTCTGG +
Preference number: 6 (lower is better)
Translates to: FWKNESVGTLPM*NPVISSPTVFW
Trigger: CCAGAAAACAGTGGGAGAAGATATAACCGGATTCAACATGGGCAATGTGCCTACACTTTCATTCTTCCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297450.7
ENST00000517746.6
CDS CAA 72 bp CCTACATACACTGATAGCCTCAGTTTCTGCAGGGTGTaGCTTCTTCCTATGGCAACTACTTGGAATCAAAAT +
Preference number: 6 (lower is better)
Translates to: PTYTDSLSFCRV*LLPMATTWNQN
Trigger: ATTTTGATTCCAAGTAGTTGCCATAGGAAGAAGCAACACCCTGCAGAAACTGAGGCTATCAGTGTATGTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520033.1
CDS CAA 90 bp CCACAAGCATCAAACCACCATCCTCCTGTTAACATGAGGGCACATTaGCACATACAGTTGTCATTATCAGCATCTTTAGTGCTGAAATCA +
Preference number: 6 (lower is better)
Translates to: PQASNHHPPVNMRAH*HIQLSLSASLVLKS
Trigger: TGATTTCAGCACTAAAGATGCTGATAATGACAACTGTATGTGCAAATGTGCCCTCATGTTAACAGGAGGATGGTGGTTTGATGCTTGTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000518386.5
ENST00000520052.1
ENST00000520734.5
CDS TCA 72 bp CAGTCCATTAACTCAATTCTTAGCATGTACTGCCTCTaGCTGGTAATGGCAAAAATAAACTCATTCCCCAGC +
Preference number: 6 (lower is better)
Translates to: QSINSILSMYCL*LVMAKINSFPS
Trigger: GCTGGGGAATGAGTTTATTTTTGCCATTACCAGTCAGAGGCAGTACATGCTAAGAATTGAGTTAATGGACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
ENST00000521950.1
ENST00000522400.1
CDS GCA 72 bp CTACATACACTGATAGCCTCAGTTTCTGCAGGGTGTTaGTTCTTCCTATGGCAACTACTTGGAATCAAAATA +
Preference number: 6 (lower is better)
Translates to: LHTLIASVSAGC*FFLWQLLGIKI
Trigger: TATTTTGATTCCAAGTAGTTGCCATAGGAAGAAGCAACACCCTGCAGAAACTGAGGCTATCAGTGTATGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520033.1
CDS CCA 72 bp TTGTCTGTTGAAGAAGTTGCTTCTCTAGCTTGTAGGTaGATAATGAATTCTCCAGCAGCTGTATCTCAAGTC +
Preference number: 6 (lower is better)
Translates to: LSVEEVASLACR*IMNSPAAVSQV
Trigger: GACTTGAGATACAGCTGCTGGAGAATTCATTATCCACCTACAAGCTAGAGAAGCAACTTCTTCAACAGACAA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000520052.1
ENST00000520734.5
CDS CAA 72 bp CCTCCTGTTAACATGAGGGCACATTTGCACATACAGTaGTCATTATCAGCATCTTTAGTGCTGAAATCAGCA +
Preference number: 6 (lower is better)
Translates to: PPVNMRAHLHIQ*SLSASLVLKSA
Trigger: TGCTGATTTCAGCACTAAAGATGCTGATAATGACAACTGTATGTGCAAATGTGCCCTCATGTTAACAGGAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000518386.5
ENST00000520052.1
ENST00000520734.5
CDS CAA 90 bp AAAGGGTATAAAAGCAGTGGCAAGAAATGTCATTCAAAGAGCGAATaGTCCATGTACTTCCTCAGAGTGGAAGGGTCCAAGATATACATG +
Preference number: 6 (lower is better)
Translates to: KGYKSSGKKCHSKSE*SMYFLRVEGSKIYM
Trigger: CATGTATATCTTGGACCCTTCCACTCTGAGGAAGTACATGGACAATTCGCTCTTTGAATGACATTTCTTGCCACTGCTTTTATACCCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522400.1
CDS CCA 72 bp CATGAATGTGGCAGCTTGATTATTCAACGGGGACTATaGGAAACACTATTTCCTCAACAACTGAATACTAAA +
Preference number: 6 (lower is better)
Translates to: HECGSLIIQRGL*ETLFPQQLNTK
Trigger: TTTAGTATTCAGTTGTTGAGGAAATAGTGTTTCCCATAGTCCCCGTTGAATAATCAAGCTGCCACATTCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522400.1
CDS CAA 90 bp TTAATTTCACCTACATACACTGATAGCCTCAGTTTCTGCAGGGTGTaGCTTCTTCCTATGGCAACTACTTGGAATCAAAATAGAAGTAAT +
Preference number: 6 (lower is better)
Translates to: LISPTYTDSLSFCRV*LLPMATTWNQNRSN
Trigger: ATTACTTCTATTTTGATTCCAAGTAGTTGCCATAGGAAGAAGCAACACCCTGCAGAAACTGAGGCTATCAGTGTATGTAGGTGAAATTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520033.1
CDS TCA 72 bp TTCTCCGGATTTCTTTGTTGCTTTCATAATCGCTTCTaGCATTGCGCTTTCAAAAATCTAAAGGTCGAATCA +
Preference number: 6 (lower is better)
Translates to: FSGFLCCFHNRF*HCAFKNLKVES
Trigger: TGATTCGACCTTTAGATTTTTGAAAGCGCAATGTCAGAAGCGATTATGAAAGCAACAAAGAAATCCGGAGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000297450.7
ENST00000517746.6
ENST00000518386.5
ENST00000520052.1
ENST00000520734.5