RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ANGEL1 (Homo sapiens)

Ensembl gene IDs: ENSG00000013523

Ensembl transcript IDs: ENST00000251089.8, ENST00000554941.1, ENST00000555079.1, ENST00000556298.1, ENST00000557179.5, ENST00000557497.1

Found 375 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TTTGTTCCCAGAGCCCAGACGCCGGGCCTGCCCTGGTTGGCAGGATaGATGCCTAATGAAACACAGAGGCTAAAAGGAGAGATGGGGCCA +
Preference number: 1 (lower is better)
Translates to: FVPRAQTPGLPWLAG*MPNETQRLKGEMGP
Trigger: TGGCCCCATCTCTCCTTTTAGCCTCTGTGTTTCATTAGGCATTCATCCTGCCAACCAGGGCAGGCCCGGCGTCTGGGCTCTGGGAACAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251089.8
3UTR TCA 90 bp GGGTACCCTTCTGTTAGGGGAGGGAAAGCAGACGCAACAAGCAGCTaGGGCCTTGCTGGACAGAGCCAATCCGCAAGTACTGCCACTTCA +
Preference number: 1 (lower is better)
Translates to: GYPSVRGGKADATSS*GLAGQSQSASTATS
Trigger: TGAAGTGGCAGTACTTGCGGATTGGCTCTGTCCAGCAAGGCCTCAGCTGCTTGTTGCGTCTGCTTTCCCTCCCCTAACAGAAGGGTACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
3UTR GCA 90 bp CAGCTTAGGTCTTCAGTCCCAGCTGAGGCAGCTGAAGAGTCTACCTaGTCCTTCCCCTACTGGAACTCCTACCCTTGCCCCAGTTCTGCA +
Preference number: 1 (lower is better)
Translates to: QLRSSVPAEAAEEST*SFPYWNSYPCPSSA
Trigger: TGCAGAACTGGGGCAAGGGTAGGAGTTCCAGTAGGGGAAGGAGCAGGTAGACTCTTCAGCTGCCTCAGCTGGGACTGAAGACCTAAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251089.8
3UTR CCA 90 bp GTGTGGGTTCTGGGAACCTGTTCAGGTAAGACAGAAAACCAGATCTaGTTTCAGGGCTCCCAGTGGGCATGTGGGCTTGGCTGGTCTTAC +
Preference number: 1 (lower is better)
Translates to: VWVLGTCSGKTENQI*FQGSQWACGLGWSY
Trigger: GTAAGACCAGCCAAGCCCACATGCCCACTGGGAGCCCTGAAACCAGATCTGGTTTTCTGTCTTACCTGAACAGGTTCCCAGAACCCACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
3UTR TCA 90 bp ATCTCACATATGCATGCCTGGCAAGAGGGCTGGGCCCAGAAGTCCTaGAGGCAGGGAAAAGGTCAGGTCAGAAGGTACATCAAGAAACGG +
Preference number: 1 (lower is better)
Translates to: ISHMHAWQEGWAQKS*RQGKGQVRRYIKKR
Trigger: CCGTTTCTTGATGTACCTTCTGACCTGACCTTTTCCCTGCCTTCAGGACTTCTGGGCCCAGCCCTCTTGCCAGGCATGCATATGTGAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
3UTR TCA 90 bp GCAGGCATGGCTGTGCAGAAGTCTCACCCCAAGAGGACACATACATaGTATGCATATCTCACATATGCATGCCTGGCAAGAGGGCTGGGC +
Preference number: 1 (lower is better)
Translates to: AGMAVQKSHPKRTHT*YAYLTYACLARGLG
Trigger: GCCCAGCCCTCTTGCCAGGCATGCATATGTGAGATATGCATATCATGTATGTGTCCTCTTGGGGTGAGACTTCTGCACAGCCATGCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
3UTR TCA 90 bp GAAAGAACCTTAACCCCTGGCTTACTGTCCCGAACTCAAGTCTCTTaGCCACTGTCTTCAGTCCCACTTTGGAGGTCGAGTGAGGCAAGA +
Preference number: 1 (lower is better)
Translates to: ERTLTPGLLSRTQVS*PLSSVPLWRSSEAR
Trigger: TCTTGCCTCACTCGACCTCCAAAGTGGGACTGAAGACAGTGGTCAAGAGACTTGAGTTCGGGACAGTAAGCCAGGGGTTAAGGTTCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
3UTR GCA 90 bp AACAAGCAGCTGAGGCCTTGCTGGACAGAGCCAATCCGCAAGTACTaGCACTTCAAATTCTTGGACCAGTTTTGTCCAAGGCCACCTTTC +
Preference number: 1 (lower is better)
Translates to: NKQLRPCWTEPIRKY*HFKFLDQFCPRPPF
Trigger: GAAAGGTGGCCTTGGACAAAACTGGTCCAAGAATTTGAAGTGGCAGTACTTGCGGATTGGCTCTGTCCAGCAAGGCCTCAGCTGCTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
3UTR CCA 90 bp CTTGCTGGACAGAGCCAATCCGCAAGTACTGCCACTTCAAATTCTTaGACCAGTTTTGTCCAAGGCCACCTTTCTGCTGAGGCAGTTTGG +
Preference number: 1 (lower is better)
Translates to: LAGQSQSASTATSNS*TSFVQGHLSAEAVW
Trigger: CCAAACTGCCTCAGCAGAAAGGTGGCCTTGGACAAAACTGGTCCAAGAATTTGAAGTGGCAGTACTTGCGGATTGGCTCTGTCCAGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
3UTR CCA 90 bp AGAAAACCAGATCTGGTTTCAGGGCTCCCAGTGGGCATGTGGGCTTaGCTGGTCTTACTACATAGGGAGGTTGGAAGACAAAAGCACCAA +
Preference number: 1 (lower is better)
Translates to: RKPDLVSGLPVGMWA*LVLLHREVGRQKHQ
Trigger: TTGGTGCTTTTGTCTTCCAACCTCCCTATGTAGTAAGACCAGCCAAGCCCACATGCCCACTGGGAGCCCTGAAACCAGATCTGGTTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251089.8
3UTR CCA 90 bp TGTTCAGGTAAGACAGAAAACCAGATCTGGTTTCAGGGCTCCCAGTaGGCATGTGGGCTTGGCTGGTCTTACTACATAGGGAGGTTGGAA +
Preference number: 1 (lower is better)
Translates to: CSGKTENQIWFQGSQ*ACGLGWSYYIGRLE
Trigger: TTCCAACCTCCCTATGTAGTAAGACCAGCCAAGCCCACATGCCCACTGGGAGCCCTGAAACCAGATCTGGTTTTCTGTCTTACCTGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
3UTR CCA 90 bp CAGGAGGCTTCACTCAAGCCCTGTTCCTCCCAGGCCTCACAGCAGTaGGAATTTACCTCAGCTAATAGAGGGAGATCTTACAACACATTT +
Preference number: 1 (lower is better)
Translates to: QEASLKPCSSQASQQ*EFTSANRGRSYNTF
Trigger: AAATGTGTTGTAAGATCTCCCTCTATTAGCTGAGGTAAATTCCCACTGCTGTGAGGCCTGGGAGGAACAGGGCTTGAGTGAAGCCTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251089.8
3UTR GCA 90 bp TGCTCAGCAAGAGGCATGTGCCACCCGCATCATGTCTCATGCAGCTaGCATAGCTTTAATCAGGAAAACACACATCTTATCCCACTTTGC +
Preference number: 1 (lower is better)
Translates to: CSARGMCHPHHVSCS*HSFNQENTHLIPLC
Trigger: GCAAAGTGGGATAAGATGTGTGTTTTCCTGATTAAAGCTATGGCAGCTGCATGAGACATGATGCGGGTGGCACATGCCTCTTGCTGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
3UTR CCA 90 bp AGGAAGAGACATTTTTCCAGCGACAGATGGCCCACTGCTCAGCCCTaGCTCCAGAATGCAAAAGAGATCAGAAATAGATGCTCAGCAAGA +
Preference number: 1 (lower is better)
Translates to: RKRHFSSDRWPTAQP*LQNAKEIRNRCSAR
Trigger: TCTTGCTGAGCATCTATTTCTGATCTCTTTTGCATTCTGGAGCCAGGGCTGAGCAGTGGGCCATCTGTCGCTGGAAAAATGTCTCTTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251089.8
3UTR CCA 90 bp GATGGAGGAAGAATGAAAAGCAGTCCAAAGAATCATTCTCTCACTTaGGAAGGACAGAAGAAAGCTGTACCCCAGCAGTGTCAAGGCAGG +
Preference number: 1 (lower is better)
Translates to: DGGRMKSSPKNHSLT*EGQKKAVPQQCQGR
Trigger: CCTGCCTTGACACTGCTGGGGTACAGCTTTCTTCTGTCCTTCCCAAGTGAGAGAATGATTCTTTGGACTGCTTTTCATTCTTCCTCCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251089.8
3UTR CCA 90 bp TCAATCAGATTCTCAGAGACTGATTCAGAGGCCTGGTGTGGGTTCTaGGAACCTGTTCAGGTAAGACAGAAAACCAGATCTGGTTTCAGG +
Preference number: 1 (lower is better)
Translates to: SIRFSETDSEAWCGF*EPVQVRQKTRSGFR
Trigger: CCTGAAACCAGATCTGGTTTTCTGTCTTACCTGAACAGGTTCCCAGAACCCACACCAGGCCTCTGAATCAGTCTCTGAGAATCTGATTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
3UTR GCA 90 bp AGCTGCCATAGCTTTAATCAGGAAAACACACATCTTATCCCACTTTaGACAGACCCTCCTGAAGTGCAGAAGATACTAGGAGGAGGCATG +
Preference number: 1 (lower is better)
Translates to: SCHSFNQENTHLIPL*TDPPEVQKILGGGM
Trigger: CATGCCTCCTCCTAGTATCTTCTGCACTTCAGGAGGGTCTGTGCAAAGTGGGATAAGATGTGTGTTTTCCTGATTAAAGCTATGGCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
3UTR GCA 90 bp AATAGATGCTCAGCAAGAGGCATGTGCCACCCGCATCATGTCTCATaGAGCTGCCATAGCTTTAATCAGGAAAACACACATCTTATCCCA +
Preference number: 1 (lower is better)
Translates to: NRCSARGMCHPHHVS*SCHSFNQENTHLIP
Trigger: TGGGATAAGATGTGTGTTTTCCTGATTAAAGCTATGGCAGCTGCATGAGACATGATGCGGGTGGCACATGCCTCTTGCTGAGCATCTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
3UTR GCA 90 bp CAGAATGCAAAAGAGATCAGAAATAGATGCTCAGCAAGAGGCATGTaGCACCCGCATCATGTCTCATGCAGCTGCCATAGCTTTAATCAG +
Preference number: 1 (lower is better)
Translates to: QNAKEIRNRCSARGM*HPHHVSCSCHSFNQ
Trigger: CTGATTAAAGCTATGGCAGCTGCATGAGACATGATGCGGGTGGCACATGCCTCTTGCTGAGCATCTATTTCTGATCTCTTTTGCATTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
3UTR CCA 90 bp GAAGGGAGGGGATGTAAGTTTCTTGGATCTAAGTTTCTAGATGCATaGGATTTTTCCACAGTCTCTGATCCAGTGAGCTCTTCTGGAAGA +
Preference number: 1 (lower is better)
Translates to: EGRGCKFLGSKFLDA*DFSTVSDPVSSSGR
Trigger: TCTTCCAGAAGAGCTCACTGGATCAGAGACTGTGGAAAAATCCCATGCATCTAGAAACTTAGATCCAAGAAACTTACATCCCCTCCCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251089.8
ENST00000557179.5
3UTR CCA 90 bp CTTTTTACTAAATCAATTGAGGGGATCGCAACCCAGGTAGTGCAATaGAAGCAACCAAGTGGCTTTAAATCAATCAGATTCTCAGAGACT +
Preference number: 1 (lower is better)
Translates to: LFTKSIEGIATQVVQ*KQPSGFKSIRFSET
Trigger: AGTCTCTGAGAATCTGATTGATTTAAAGCCACTTGGTTGCTTCCATTGCACTACCTGGGTTGCGATCCCCTCAATTGATTTAGTAAAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251089.8
3UTR-3UTR CCA 90 bp TGGACTGGTCAGAGGCAGGCATGGCTGTGCAGAAGTCTCACCCCAAGAGGACACGGAGCGCTGGATACATaGAAGGAAGGGGGAGCCCCC +
Preference number: 2 (lower is better)
Translates to: WTGQRQAWLCRSLTPRGHGALDT*KEGGAP
Trigger: GGGGGCTCCCCCTTCCTTCCATGTATCCAGCGCTCC...GTGTCCTCTTGGGGTGAGACTTCTGCACAGCCATGCCTGCCTCTGACCAGTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251089.8
3UTR-3UTR GCA 90 bp CCTGTTCCTCCCAGGCCTCACAGCAGTGGGAATTTACCTCAGCTAATAGAGGGACCCAGACGCCGGGCCTaGCCTGGTTGGCAGGATGAA +
Preference number: 2 (lower is better)
Translates to: PVPPRPHSSGNLPQLIEGPRRRA*PGWQDE
Trigger: TTCATCCTGCCAACCAGGGCAGGCCCGGCGTCTGGG...TCCCTCTATTAGCTGAGGTAAATTCCCACTGCTGTGAGGCCTGGGAGGAACAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251089.8
3UTR-3UTR CCA 90 bp GGGAGGGAAAGCAGACGCAACAAGCAGCTGAGGCCTTGCTGGACAGAGCCAATCGGGCCACTGAGTGTGTaGCACAGGATTAGGAAGAGG +
Preference number: 2 (lower is better)
Translates to: GRESRRNKQLRPCWTEPIGPLSV*HRIRKR
Trigger: CCTCTTCCTAATCCTGTGCCACACACTCAGTGGCCC...GATTGGCTCTGTCCAGCAAGGCCTCAGCTGCTTGTTGCGTCTGCTTTCCCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251089.8
3UTR-3UTR CCA 90 bp CCACATAAGGGTTCAAACTTCCGCCTCCCTCAGGGAAGCCTGGGGAAAGGGATGTCACATATGCATGCCTaGCAAGAGGGCTGGGCCCAG +
Preference number: 2 (lower is better)
Translates to: PHKGSNFRLPQGSLGKGMSHMHA*QEGWAQ
Trigger: CTGGGCCCAGCCCTCTTGCCAGGCATGCATATGTGA...CATCCCTTTCCCCAGGCTTCCCTGAGGGAGGCGGAAGTTTGAACCCTTATGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
3UTR-3UTR CCA 90 bp CAGGTGACACAGTGTGGACTAAGGAGTCCCCTGAATAAGCCAGGGTACCCTTCTGTCTGTGGGGAGCTCTaGGTTGGAGGCACAGGGCCA +
Preference number: 2 (lower is better)
Translates to: QVTQCGLRSPLNKPGYPSVCGEL*VGGTGP
Trigger: TGGCCCTGTGCCTCCAACCCAGAGCTCCCCACAGAC...AGAAGGGTACCCTGGCTTATTCAGGGGACTCCTTAGTCCACACTGTGTCACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251089.8
3UTR-3UTR GCA 90 bp ATTTTTCCAGCGACAGATGGCCCACTGCTCAGCCCTGGCTCCAGAATGCAAAAGGGGGCCATGCCCTGCTaGTGCCTGCTCATACATAGG +
Preference number: 2 (lower is better)
Translates to: IFPATDGPLLSPGSRMQKGAMPC*CLLIHR
Trigger: CCTATGTATGAGCAGGCAGCAGCAGGGCATGGCCCC...CTTTTGCATTCTGGAGCCAGGGCTGAGCAGTGGGCCATCTGTCGCTGGAAAAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000251089.8
3UTR-3UTR TCA 90 bp GCAGCTGAGGCCTTGCTGGACAGAGCCAATCCGCAAGTACTGCCACTTCAAATTCTCTCCCAGGGCCACTaGGTGTGTGGCACAGGATTA +
Preference number: 2 (lower is better)
Translates to: AAEALLDRANPQVLPLQILSQGH*VCGTGL
Trigger: TAATCCTGTGCCACACACTCAGTGGCCCTGGGAGAG...AATTTGAAGTGGCAGTACTTGCGGATTGGCTCTGTCCAGCAAGGCCTCAGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251089.8
3UTR-3UTR GCA 90 bp GCAGCTGAGGCCTTGCTGGACAGAGCCAATCCGCAAGTACTGCCACTTCAAATTGATGGGGCCATGCCCTaGTGCTGCCTGCTCATACAT +
Preference number: 2 (lower is better)
Translates to: AAEALLDRANPQVLPLQIDGAMP*CCLLIH
Trigger: ATGTATGAGCAGGCAGCAGCAGGGCATGGCCCCATC...AATTTGAAGTGGCAGTACTTGCGGATTGGCTCTGTCCAGCAAGGCCTCAGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
3UTR-3UTR GCA 90 bp CTGAATAAGCCAGGGTACCCTTCTGTTAGGGGAGGGAAAGCAGACGCAACAAGCTGGAACTCCTACCCTTaGCCCAGTTCTGCAGGCTGC +
Preference number: 2 (lower is better)
Translates to: LNKPGYPSVRGGKADATSWNSYP*PSSAGC
Trigger: GCAGCCTGCAGAACTGGGGCAAGGGTAGGAGTTCCA...GCTTGTTGCGTCTGCTTTCCCTCCCCTAACAGAAGGGTACCCTGGCTTATTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
3UTR CAA 90 bp TCCCAGTGGGCATGTGGGCTTGGCTGGTCTTACTACATAGGGAGGTaGGAAGACAAAAGCACCAACAGAGGTAGGCCTAGGAAGGAAGAG +
Preference number: 2 (lower is better)
Translates to: SQWACGLGWSYYIGR*EDKSTNRGRPRKEE
Trigger: CTCTTCCTTCCTAGGCCTACCTCTGTTGGTGCTTTTGTCTTCCAACCTCCCTATGTAGTAAGACCAGCCAAGCCCACATGCCCACTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
3UTR-3UTR TCA 90 bp CCACATAAGGGTTCAAACTTCCGCCTCCCTCAGGGAAGCCTGGGGAAAGGGATGTTTTTCCACAGTCTCTaGTCCAGTGAGCTCTTCTGG +
Preference number: 2 (lower is better)
Translates to: PHKGSNFRLPQGSLGKGMFFHSL*SSELFW
Trigger: CCAGAAGAGCTCACTGGATCAGAGACTGTGGAAAAA...CATCCCTTTCCCCAGGCTTCCCTGAGGGAGGCGGAAGTTTGAACCCTTATGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251089.8
3UTR-3UTR TCA 90 bp ATTTTTCCAGCGACAGATGGCCCACTGCTCAGCCCTGGCTCCAGAATGCAAAAGCCTACAGCCCCAACATaGAAAGTGGACTGGTCAGAG +
Preference number: 2 (lower is better)
Translates to: IFPATDGPLLSPGSRMQKPTAPT*KVDWSE
Trigger: CTCTGACCAGTCCACTTTTCATGTTGGGGCTGTAGG...CTTTTGCATTCTGGAGCCAGGGCTGAGCAGTGGGCCATCTGTCGCTGGAAAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000251089.8
3UTR-3UTR GCA 90 bp ATTTTTCCAGCGACAGATGGCCCACTGCTCAGCCCTGGCTCCAGAATGCAAAAGTCAGCAAGAGGCATGTaGCACCCGCATCATGTCTCA +
Preference number: 2 (lower is better)
Translates to: IFPATDGPLLSPGSRMQKSARGM*HPHHVS
Trigger: TGAGACATGATGCGGGTGGCACATGCCTCTTGCTGA...CTTTTGCATTCTGGAGCCAGGGCTGAGCAGTGGGCCATCTGTCGCTGGAAAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251089.8
3UTR-3UTR CCA 90 bp ACCACAGGCAGAGAACGCAGCCAGGCCTGGAGAAAGTCTAACCGTGGGAAAAAGTCCAGTGAGCTCTTCTaGAAGAGAAGCTCTCTTCCC +
Preference number: 2 (lower is better)
Translates to: TTGRERSQAWRKSNRGKKSSELF*KRSSLP
Trigger: GGGAAGAGAGCTTCTCTTCCAGAAGAGCTCACTGGA...CTTTTTCCCACGGTTAGACTTTCTCCAGGCCTGGCTGCGTTCTCTGCCTGTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251089.8
ENST00000557179.5
3UTR-3UTR TCA 90 bp ACCACAGGCAGAGAACGCAGCCAGGCCTGGAGAAAGTCTAACCGTGGGAAAAAGTTTTTCCACAGTCTCTaGTCCAGTGAGCTCTTCTGG +
Preference number: 2 (lower is better)
Translates to: TTGRERSQAWRKSNRGKKFFHSL*SSELFW
Trigger: CCAGAAGAGCTCACTGGATCAGAGACTGTGGAAAAA...CTTTTTCCCACGGTTAGACTTTCTCCAGGCCTGGCTGCGTTCTCTGCCTGTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000251089.8
ENST00000557179.5
3UTR-3UTR CCA 90 bp ATTTTTCCAGCGACAGATGGCCCACTGCTCAGCCCTGGCTCCAGAATGCAAAAGTCTTCAGTCCCACTTTaGAGGTCGAGTGAGGCAAGA +
Preference number: 2 (lower is better)
Translates to: IFPATDGPLLSPGSRMQKSSVPL*RSSEAR
Trigger: TCTTGCCTCACTCGACCTCCAAAGTGGGACTGAAGA...CTTTTGCATTCTGGAGCCAGGGCTGAGCAGTGGGCCATCTGTCGCTGGAAAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251089.8
3UTR-3UTR TCA 90 bp GATTCAGAGGCCTGGTGTGGGTTCTGGGAACCTGTTCAGGTAAGACAGAAAACCGGCTGCAGAGTCCAGTaGAACAAGAGTTTCCTGAAG +
Preference number: 2 (lower is better)
Translates to: DSEAWCGFWEPVQVRQKTGCRVQ*NKSFLK
Trigger: CTTCAGGAAACTCTTGTTTCACTGGACTCTGCAGCC...GGTTTTCTGTCTTACCTGAACAGGTTCCCAGAACCCACACCAGGCCTCTGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
3UTR-3UTR CCA 90 bp GGCAGGGAAAAGGTCAGGTCAGAAGGTACATCAAGAAACGGCCTGAAAGCAAATATCAAGGGGGAGCGCTaGATACATGGAAGGAAGGGG +
Preference number: 2 (lower is better)
Translates to: GREKVRSEGTSRNGLKANIKGER*IHGRKG
Trigger: CCCCTTCCTTCCATGTATCCAGCGCTCCCCCTTGAT...ATTTGCTTTCAGGCCGTTTCTTGATGTACCTTCTGACCTGACCTTTTCCCTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251089.8
3UTR-3UTR CCA 90 bp CCACTTTGCACAGACCCTCCTGAAGTGCAGAAGATACTAGGAGGAGGCATGGGGTCATACATAGGTACTTaGGTAGACTCTGAACCTGCC +
Preference number: 2 (lower is better)
Translates to: PLCTDPPEVQKILGGGMGSYIGT*VDSEPA
Trigger: GGCAGGTTCAGAGTCTACCCAAGTACCTATGTATGA...CCCCATGCCTCCTCCTAGTATCTTCTGCACTTCAGGAGGGTCTGTGCAAAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
3UTR-3UTR TCA 90 bp CCACATAAGGGTTCAAACTTCCGCCTCCCTCAGGGAAGCCTGGGGAAAGGGATGCATCAAGAAACGGCCTaGAAGCAAATAACCAATGAA +
Preference number: 2 (lower is better)
Translates to: PHKGSNFRLPQGSLGKGMHQETA*KQITNE
Trigger: TTCATTGGTTATTTGCTTTCAGGCCGTTTCTTGATG...CATCCCTTTCCCCAGGCTTCCCTGAGGGAGGCGGAAGTTTGAACCCTTATGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
3UTR-3UTR TCA 90 bp TGCCACCCGCATCATGTCTCATGCAGCTGCCATAGCTTTAATCAGGAAAACACAGCCACACCCCAGCAATaGAAGATTAAGGCATGCAGG +
Preference number: 2 (lower is better)
Translates to: CHPHHVSCSCHSFNQENTATPQQ*KIKACR
Trigger: CCTGCATGCCTTAATCTTTCATTGCTGGGGTGTGGC...TGTGTTTTCCTGATTAAAGCTATGGCAGCTGCATGAGACATGATGCGGGTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251089.8
3UTR-3UTR CCA 90 bp CGCAAGTACTGCCACTTCAAATTCTTGGACCAGTTTTGTCCAAGGCCACCTTTCCCCCAACATGAAAAGTaGACTGGTCAGAGGCAGGCA +
Preference number: 2 (lower is better)
Translates to: RKYCHFKFLDQFCPRPPFPQHEK*TGQRQA
Trigger: TGCCTGCCTCTGACCAGTCCACTTTTCATGTTGGGG...GAAAGGTGGCCTTGGACAAAACTGGTCCAAGAATTTGAAGTGGCAGTACTTGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000251089.8
3UTR-3UTR CCA 90 bp AAGCCCTGTTCCTCCCAGGCCTCACAGCAGTGGGAATTTACCTCAGCTAATAGAAAGAACCTTAACCCCTaGCTTACTGTCCCGAACTCA +
Preference number: 2 (lower is better)
Translates to: KPCSSQASQQWEFTSANRKNLNP*LTVPNS
Trigger: TGAGTTCGGGACAGTAAGCCAGGGGTTAAGGTTCTT...TCTATTAGCTGAGGTAAATTCCCACTGCTGTGAGGCCTGGGAGGAACAGGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
3UTR-3UTR TCA 90 bp ATAAATTCCCTAGAACCTAGGCATGGAAAGCTTCTAACCATGAATGCAGCAGCAGGCCAGCAGCCACTCTaGCTTAGGGAGATGTGTGGA +
Preference number: 2 (lower is better)
Translates to: INSLEPRHGKLLTMNAAAGQQPL*LREMCG
Trigger: TCCACACATCTCCCTAAGTCAGAGTGGCTGCTGGCC...TGCTGCTGCATTCATGGTTAGAAGCTTTCCATGCCTAGGTTCTAGGGAATTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251089.8
3UTR-3UTR CCA 90 bp GATTCAGAGGCCTGGTGTGGGTTCTGGGAACCTGTTCAGGTAAGACAGAAAACCGCCACTTCAAATTCTTaGACCAGTTTTGTCCAAGGC +
Preference number: 2 (lower is better)
Translates to: DSEAWCGFWEPVQVRQKTATSNS*TSFVQG
Trigger: GCCTTGGACAAAACTGGTCCAAGAATTTGAAGTGGC...GGTTTTCTGTCTTACCTGAACAGGTTCCCAGAACCCACACCAGGCCTCTGAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251089.8
3UTR-3UTR GCA 90 bp CGCAAGTACTGCCACTTCAAATTCTTGGACCAGTTTTGTCCAAGGCCACCTTTCTGCATATCTCACATATaGATGCCTGGCAAGAGGGCT +
Preference number: 2 (lower is better)
Translates to: RKYCHFKFLDQFCPRPPFCISHI*MPGKRA
Trigger: AGCCCTCTTGCCAGGCATGCATATGTGAGATATGCA...GAAAGGTGGCCTTGGACAAAACTGGTCCAAGAATTTGAAGTGGCAGTACTTGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
3UTR-3UTR CCA 90 bp AGAGAACGCAGCCAGGCCTGGAGAAAGTCTAACCGTGGGAAAAAGGGAACGAGGAAGTTTCTAGATGCATaGGATTTTTCCACAGTCTCT +
Preference number: 2 (lower is better)
Translates to: RERSQAWRKSNRGKKGTRKFLDA*DFSTVS
Trigger: AGAGACTGTGGAAAAATCCCATGCATCTAGAAACTT...CCTCGTTCCCTTTTTCCCACGGTTAGACTTTCTCCAGGCCTGGCTGCGTTCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000251089.8
ENST00000557179.5
3UTR-3UTR CCA 90 bp ATAAATTCCCTAGAACCTAGGCATGGAAAGCTTCTAACCATGAATGCAGCAGCATGCCACTCCAGGATGTaGGCCCCATTTGTTCCCAGA +
Preference number: 2 (lower is better)
Translates to: INSLEPRHGKLLTMNAAACHSRM*APFVPR
Trigger: TCTGGGAACAAATGGGGCCCACATCCTGGAGTGGCA...TGCTGCTGCATTCATGGTTAGAAGCTTTCCATGCCTAGGTTCTAGGGAATTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
3UTR-3UTR CCA 90 bp AAAACACACATCTTATCCCACTTTGCACAGACCCTCCTGAAGTGCAGAAGATACGCAGGTGACACAGTGTaGACTAAGGAGTCCCCTGAA +
Preference number: 2 (lower is better)
Translates to: KTHILSHFAQTLLKCRRYAGDTV*TKESPE
Trigger: TTCAGGGGACTCCTTAGTCCACACTGTGTCACCTGC...GTATCTTCTGCACTTCAGGAGGGTCTGTGCAAAGTGGGATAAGATGTGTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251089.8
3UTR CAA 90 bp AGATGGAGGAAGAATGAAAAGCAGTCCAAAGAATCATTCTCTCACTaGGGAAGGACAGAAGAAAGCTGTACCCCAGCAGTGTCAAGGCAG +
Preference number: 2 (lower is better)
Translates to: RWRKNEKQSKESFSH*GRTEESCTPAVSRQ
Trigger: CTGCCTTGACACTGCTGGGGTACAGCTTTCTTCTGTCCTTCCCAAGTGAGAGAATGATTCTTTGGACTGCTTTTCATTCTTCCTCCATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251089.8
3UTR-3UTR TCA 90 bp TACCTACAGTCACCAGCTGAACAGGCCAAGAGGACAAATGATGTTTCTAATTCCCAGTCTCTGATCCAGTaGGCTCTTCTGGAAGAGAAG +
Preference number: 2 (lower is better)
Translates to: YLQSPAEQAKRTNDVSNSQSLIQ*ALLEEK
Trigger: CTTCTCTTCCAGAAGAGCTCACTGGATCAGAGACTG...GGAATTAGAAACATCATTTGTCCTCTTGGCCTGTTCAGCTGGTGACTGTAGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251089.8
3UTR-3UTR GCA 90 bp TACCTACAGTCACCAGCTGAACAGGCCAAGAGGACAAATGATGTTTCTAATTCCAATCTATCAAGCATCTaGCCTCTGCTGTGGTTAGCC +
Preference number: 2 (lower is better)
Translates to: YLQSPAEQAKRTNDVSNSNLSSI*PLLWLA
Trigger: GGCTAACCACAGCAGAGGGCAGATGCTTGATAGATT...GGAATTAGAAACATCATTTGTCCTCTTGGCCTGTTCAGCTGGTGACTGTAGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251089.8
3UTR-3UTR GCA 90 bp ATAAATTCCCTAGAACCTAGGCATGGAAAGCTTCTAACCATGAATGCAGCAGCACCAATCCGCAAGTACTaGCACTTCAAATTCTTGGAC +
Preference number: 2 (lower is better)
Translates to: INSLEPRHGKLLTMNAAAPIRKY*HFKFLD
Trigger: GTCCAAGAATTTGAAGTGGCAGTACTTGCGGATTGG...TGCTGCTGCATTCATGGTTAGAAGCTTTCCATGCCTAGGTTCTAGGGAATTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251089.8
3UTR-3UTR CCA 90 bp GGATGTAAGTTTCTTGGATCTAAGTTTCTAGATGCATGGGATTTTTCCACAGTCTCCAGTGAGCTCTTCTaGAAGAGAAGCTCTCTTCCC +
Preference number: 2 (lower is better)
Translates to: GCKFLGSKFLDAWDFSTVSSELF*KRSSLP
Trigger: GGGAAGAGAGCTTCTCTTCCAGAAGAGCTCACTGGA...GACTGTGGAAAAATCCCATGCATCTAGAAACTTAGATCCAAGAAACTTACATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251089.8
ENST00000557179.5
3UTR-3UTR CCA 90 bp AATCAGGAAAACACACATCTTATCCCACTTTGCACAGACCCTCCTGAAGTGCAGAAGTTTCTAGATGCATaGGATTTTTCCACAGTCTCT +
Preference number: 2 (lower is better)
Translates to: NQENTHLIPLCTDPPEVQKFLDA*DFSTVS
Trigger: AGAGACTGTGGAAAAATCCCATGCATCTAGAAACTT...CTGCACTTCAGGAGGGTCTGTGCAAAGTGGGATAAGATGTGTGTTTTCCTGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251089.8
3UTR TCA 72 bp AGAGCAAGTCAAATCTACCAGGGCCAGCAGCCACTCTaGCTTAGGGAGATGTGTGGAGGGGCTGGCCCAGGA +
Preference number: 3 (lower is better)
Translates to: RASQIYQGQQPL*LREMCGGAGPG
Trigger: TCCTGGGCCAGCCCCTCCACACATCTCCCTAAGTCAGAGTGGCTGCTGGCCCTGGTAGATTTGACTTGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
3UTR GCA 72 bp GGGAGGGAAAGCAGACGCAACAAGCAGCTGAGGCCTTaGTGGACAGAGCCAATCCGCAAGTACTGCCACTTC +
Preference number: 3 (lower is better)
Translates to: GRESRRNKQLRP*WTEPIRKYCHF
Trigger: GAAGTGGCAGTACTTGCGGATTGGCTCTGTCCAGCAAGGCCTCAGCTGCTTGTTGCGTCTGCTTTCCCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251089.8
3UTR-3UTR CAA 90 bp CCACTTTGCACAGACCCTCCTGAAGTGCAGAAGATACTAGGAGGAGGCATGGGGCGCATCCCCCAAAATTaGCCACTCCAGGATGTGGGC +
Preference number: 3 (lower is better)
Translates to: PLCTDPPEVQKILGGGMGRIPQN*PLQDVG
Trigger: GCCCACATCCTGGAGTGGCAAATTTTGGGGGATGCG...CCCCATGCCTCCTCCTAGTATCTTCTGCACTTCAGGAGGGTCTGTGCAAAGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000251089.8
3UTR TCA 72 bp AGAGCCCAGACGCCGGGCCTGCCCTGGTTGGCAGGATaGATGCCTAATGAAACACAGAGGCTAAAAGGAGAG +
Preference number: 3 (lower is better)
Translates to: RAQTPGLPWLAG*MPNETQRLKGE
Trigger: CTCTCCTTTTAGCCTCTGTGTTTCATTAGGCATTCATCCTGCCAACCAGGGCAGGCCCGGCGTCTGGGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
3UTR TCA 72 bp TGGGCCCTAGTCCTAGGAACCCACAGGGCACTGTCTTaGGACCCTTTTAGGCAGTGTCCAGGGAACAGACAG +
Preference number: 3 (lower is better)
Translates to: WALVLGTHRALS*DPFRQCPGNRQ
Trigger: CTGTCTGTTCCCTGGACACTGCCTAAAAGGGTCTCAAGACAGTGCCCTGTGGGTTCCTAGGACTAGGGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
3UTR CCA 72 bp GGCAGTGTCCAGGGAACAGACAGACAGAATGAATGGTaGGGTGTAGACAGACCTGGGGCTCAGACAGGCACA +
Preference number: 3 (lower is better)
Translates to: GSVQGTDRQNEW*GVDRPGAQTGT
Trigger: TGTGCCTGTCTGAGCCCCAGGTCTGTCTACACCCCACCATTCATTCTGTCTGTCTGTTCCCTGGACACTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
3UTR CCA 72 bp CTGGGAACCTGTTCAGGTAAGACAGAAAACCAGATCTaGTTTCAGGGCTCCCAGTGGGCATGTGGGCTTGGC +
Preference number: 3 (lower is better)
Translates to: LGTCSGKTENQI*FQGSQWACGLG
Trigger: GCCAAGCCCACATGCCCACTGGGAGCCCTGAAACCAGATCTGGTTTTCTGTCTTACCTGAACAGGTTCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
3UTR GCA 72 bp ACAGAGGCTAAAAGGAGAGATGGGGCCATGCCCTGCTaGTGCCTGCTCATACATAGGTACTTGGGTAGACTC +
Preference number: 3 (lower is better)
Translates to: TEAKRRDGAMPC*CLLIHRYLGRL
Trigger: GAGTCTACCCAAGTACCTATGTATGAGCAGGCAGCAGCAGGGCATGGCCCCATCTCTCCTTTTAGCCTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251089.8
3UTR CCA 72 bp GGCCTAGGAAGGAAGAGACATTTTTCCAGCGACAGATaGCCCACTGCTCAGCCCTGGCTCCAGAATGCAAAA +
Preference number: 3 (lower is better)
Translates to: GLGRKRHFSSDR*PTAQPWLQNAK
Trigger: TTTTGCATTCTGGAGCCAGGGCTGAGCAGTGGGCCATCTGTCGCTGGAAAAATGTCTCTTCCTTCCTAGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000251089.8
3UTR CCA 72 bp GATCTGGTTTCAGGGCTCCCAGTGGGCATGTGGGCTTaGCTGGTCTTACTACATAGGGAGGTTGGAAGACAA +
Preference number: 3 (lower is better)
Translates to: DLVSGLPVGMWA*LVLLHREVGRQ
Trigger: TTGTCTTCCAACCTCCCTATGTAGTAAGACCAGCCAAGCCCACATGCCCACTGGGAGCCCTGAAACCAGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251089.8
3UTR TCA 72 bp TTGACCACTGTCTTCAGTCCCACTTTGGAGGTCGAGTaGGGCAAGAGCAAGTCAAATCTACCAGGGCCAGCA +
Preference number: 3 (lower is better)
Translates to: LTTVFSPTLEVE*GKSKSNLPGPA
Trigger: TGCTGGCCCTGGTAGATTTGACTTGCTCTTGCCTCACTCGACCTCCAAAGTGGGACTGAAGACAGTGGTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251089.8
3UTR GCA 72 bp CTAAAAGGAGAGATGGGGCCATGCCCTGCTGCTGCCTaGTCATACATAGGTACTTGGGTAGACTCTGAACCT +
Preference number: 3 (lower is better)
Translates to: LKGEMGPCPAAA*SYIGTWVDSEP
Trigger: AGGTTCAGAGTCTACCCAAGTACCTATGTATGAGCAGGCAGCAGCAGGGCATGGCCCCATCTCTCCTTTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251089.8
3UTR GCA 72 bp AACACAGAGGCTAAAAGGAGAGATGGGGCCATGCCCTaGTGCTGCCTGCTCATACATAGGTACTTGGGTAGA +
Preference number: 3 (lower is better)
Translates to: NTEAKRRDGAMP*CCLLIHRYLGR
Trigger: TCTACCCAAGTACCTATGTATGAGCAGGCAGCAGCAGGGCATGGCCCCATCTCTCCTTTTAGCCTCTGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251089.8
3UTR-3UTR CAA 90 bp ATAAATTCCCTAGAACCTAGGCATGGAAAGCTTCTAACCATGAATGCAGCAGCAGGATGTGGGCCCCATTaGTTCCCAGAGCCCAGACGC +
Preference number: 3 (lower is better)
Translates to: INSLEPRHGKLLTMNAAAGCGPH*FPEPRR
Trigger: GCGTCTGGGCTCTGGGAACAAATGGGGCCCACATCC...TGCTGCTGCATTCATGGTTAGAAGCTTTCCATGCCTAGGTTCTAGGGAATTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
3UTR-3UTR CAA 90 bp ATTTTTCCAGCGACAGATGGCCCACTGCTCAGCCCTGGCTCCAGAATGCAAAAGATTCTTGGACCAGTTTaGTCCAAGGCCACCTTTCTG +
Preference number: 3 (lower is better)
Translates to: IFPATDGPLLSPGSRMQKILGPV*SKATFL
Trigger: CAGAAAGGTGGCCTTGGACAAAACTGGTCCAAGAAT...CTTTTGCATTCTGGAGCCAGGGCTGAGCAGTGGGCCATCTGTCGCTGGAAAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251089.8
3UTR TCA 72 bp CATTTTAAAGCTGCATTTCCCAGCAGAAGAGAACAGTaGTGGGCCCTAGTCCTAGGAACCCACAGGGCACTG +
Preference number: 3 (lower is better)
Translates to: HFKAAFPSRREQ*WALVLGTHRAL
Trigger: CAGTGCCCTGTGGGTTCCTAGGACTAGGGCCCATCACTGTTCTCTTCTGCTGGGAAATGCAGCTTTAAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
3UTR GCA 72 bp CATGAAAAGTGGACTGGTCAGAGGCAGGCATGGCTGTaGAGAAGTCTCACCCCAAGAGGACACATACATGAT +
Preference number: 3 (lower is better)
Translates to: HEKWTGQRQAWL*RSLTPRGHIHD
Trigger: ATCATGTATGTGTCCTCTTGGGGTGAGACTTCTGCACAGCCATGCCTGCCTCTGACCAGTCCACTTTTCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251089.8
3UTR GCA 72 bp CTGAGGCCTTGCTGGACAGAGCCAATCCGCAAGTACTaGCACTTCAAATTCTTGGACCAGTTTTGTCCAAGG +
Preference number: 3 (lower is better)
Translates to: LRPCWTEPIRKY*HFKFLDQFCPR
Trigger: CCTTGGACAAAACTGGTCCAAGAATTTGAAGTGGCAGTACTTGCGGATTGGCTCTGTCCAGCAAGGCCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
3UTR GCA 72 bp AAGGAAGAGACATTTTTCCAGCGACAGATGGCCCACTaGTCAGCCCTGGCTCCAGAATGCAAAAGAGATCAG +
Preference number: 3 (lower is better)
Translates to: KEETFFQRQMAH*SALAPECKRDQ
Trigger: CTGATCTCTTTTGCATTCTGGAGCCAGGGCTGAGCAGTGGGCCATCTGTCGCTGGAAAAATGTCTCTTCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251089.8
3UTR CCA 72 bp TCACTCAAGCCCTGTTCCTCCCAGGCCTCACAGCAGTaGGAATTTACCTCAGCTAATAGAGGGAGATCTTAC +
Preference number: 3 (lower is better)
Translates to: SLKPCSSQASQQ*EFTSANRGRSY
Trigger: GTAAGATCTCCCTCTATTAGCTGAGGTAAATTCCCACTGCTGTGAGGCCTGGGAGGAACAGGGCTTGAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251089.8
3UTR GCA 72 bp AAAGAGATCAGAAATAGATGCTCAGCAAGAGGCATGTaGCACCCGCATCATGTCTCATGCAGCTGCCATAGC +
Preference number: 3 (lower is better)
Translates to: KEIRNRCSARGM*HPHHVSCSCHS
Trigger: GCTATGGCAGCTGCATGAGACATGATGCGGGTGGCACATGCCTCTTGCTGAGCATCTATTTCTGATCTCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251089.8
3UTR CCA 72 bp CAGAGCCAATCCGCAAGTACTGCCACTTCAAATTCTTaGACCAGTTTTGTCCAAGGCCACCTTTCTGCTGAG +
Preference number: 3 (lower is better)
Translates to: QSQSASTATSNS*TSFVQGHLSAE
Trigger: CTCAGCAGAAAGGTGGCCTTGGACAAAACTGGTCCAAGAATTTGAAGTGGCAGTACTTGCGGATTGGCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
3UTR GCA 72 bp TCAGCAAGAGGCATGTGCCACCCGCATCATGTCTCATaGAGCTGCCATAGCTTTAATCAGGAAAACACACAT +
Preference number: 3 (lower is better)
Translates to: SARGMCHPHHVS*SCHSFNQENTH
Trigger: ATGTGTGTTTTCCTGATTAAAGCTATGGCAGCTGCATGAGACATGATGCGGGTGGCACATGCCTCTTGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
3UTR CCA 72 bp TTCTCAGAGACTGATTCAGAGGCCTGGTGTGGGTTCTaGGAACCTGTTCAGGTAAGACAGAAAACCAGATCT +
Preference number: 3 (lower is better)
Translates to: FSETDSEAWCGF*EPVQVRQKTRS
Trigger: AGATCTGGTTTTCTGTCTTACCTGAACAGGTTCCCAGAACCCACACCAGGCCTCTGAATCAGTCTCTGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
3UTR GCA 72 bp AGAGGCATGTGCCACCCGCATCATGTCTCATGCAGCTaGCATAGCTTTAATCAGGAAAACACACATCTTATC +
Preference number: 3 (lower is better)
Translates to: RGMCHPHHVSCS*HSFNQENTHLI
Trigger: GATAAGATGTGTGTTTTCCTGATTAAAGCTATGGCAGCTGCATGAGACATGATGCGGGTGGCACATGCCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
3UTR-3UTR CAA 90 bp AATCAGGAAAACACACATCTTATCCCACTTTGCACAGACCCTCCTGAAGTGCAGGAGAGGAACAGAAAATaGCTTCTTAGGAGTGGAGAG +
Preference number: 3 (lower is better)
Translates to: NQENTHLIPLCTDPPEVQERNRK*LLRSGE
Trigger: CTCTCCACTCCTAAGAAGCAATTTTCTGTTCCTCTC...CTGCACTTCAGGAGGGTCTGTGCAAAGTGGGATAAGATGTGTGTTTTCCTGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251089.8
3UTR-3UTR CAA 90 bp AATCAGGAAAACACACATCTTATCCCACTTTGCACAGACCCTCCTGAAGTGCAGTGCCACTTCAAATTCTaGGACCAGTTTTGTCCAAGG +
Preference number: 3 (lower is better)
Translates to: NQENTHLIPLCTDPPEVQCHFKF*DQFCPR
Trigger: CCTTGGACAAAACTGGTCCAAGAATTTGAAGTGGCA...CTGCACTTCAGGAGGGTCTGTGCAAAGTGGGATAAGATGTGTGTTTTCCTGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251089.8
3UTR TCA 72 bp AATAGTTTTAAACCTCATACCACTACCCTAGCCCAATaGACCCCACATAAGGGTTCAAACTTCCGCCTCCCT +
Preference number: 3 (lower is better)
Translates to: NSFKPHTTTLAQ*TPHKGSNFRLP
Trigger: AGGGAGGCGGAAGTTTGAACCCTTATGTGGGGTTCATTGGGCTAGGGTAGTGGTATGAGGTTTAAAACTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251089.8
3UTR CCA 72 bp AGAATGAAAAGCAGTCCAAAGAATCATTCTCTCACTTaGGAAGGACAGAAGAAAGCTGTACCCCAGCAGTGT +
Preference number: 3 (lower is better)
Translates to: RMKSSPKNHSLT*EGQKKAVPQQC
Trigger: ACACTGCTGGGGTACAGCTTTCTTCTGTCCTTCCCAAGTGAGAGAATGATTCTTTGGACTGCTTTTCATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251089.8
3UTR GCA 72 bp AGCTTTAATCAGGAAAACACACATCTTATCCCACTTTaGACAGACCCTCCTGAAGTGCAGAAGATACTAGGA +
Preference number: 3 (lower is better)
Translates to: SFNQENTHLIPL*TDPPEVQKILG
Trigger: TCCTAGTATCTTCTGCACTTCAGGAGGGTCTGTGCAAAGTGGGATAAGATGTGTGTTTTCCTGATTAAAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
3UTR CCA 72 bp AAATCAATTGAGGGGATCGCAACCCAGGTAGTGCAATaGAAGCAACCAAGTGGCTTTAAATCAATCAGATTC +
Preference number: 3 (lower is better)
Translates to: KSIEGIATQVVQ*KQPSGFKSIRF
Trigger: GAATCTGATTGATTTAAAGCCACTTGGTTGCTTCCATTGCACTACCTGGGTTGCGATCCCCTCAATTGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR CCA 90 bp TGGACTGGTCAGAGGCAGGCATGGCTGTGCAGAAGTCTCACCCCAAGAGGACACGGAGCTGGGCCACAGTaGGGCCTGCAGCTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: WTGQRQAWLCRSLTPRGHGAGPQ*GLQLPL
Trigger: CAGAGGAAGCTGCAGGCCCCACTGTGGCCCAGCTCC...GTGTCCTCTTGGGGTGAGACTTCTGCACAGCCATGCCTGCCTCTGACCAGTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR GCA 90 bp AGAGAACGCAGCCAGGCCTGGAGAAAGTCTAACCGTGGGAAAAAGGGAACGAGGGCCTCCGCTCCTCACTaGAGCCAGCAGGTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: RERSQAWRKSNRGKKGTRASAPH*SQQVLP
Trigger: AGGGAGGACCTGCTGGCTGCAGTGAGGAGCGGAGGC...CCTCGTTCCCTTTTTCCCACGGTTAGACTTTCTCCAGGCCTGGCTGCGTTCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR CCA 90 bp GGGAGGGAAAGCAGACGCAACAAGCAGCTGAGGCCTTGCTGGACAGAGCCAATCAAGTCGCCCTCTACCTaGGGGGATGAGCTGTTCGCC +
Preference number: 4 (lower is better)
Translates to: GRESRRNKQLRPCWTEPIKSPST*GDELFA
Trigger: GGCGAACAGCTCATCCCCCCAGGTAGAGGGCGACTT...GATTGGCTCTGTCCAGCAAGGCCTCAGCTGCTTGTTGCGTCTGCTTTCCCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR CCA 90 bp AAAGTGGACTGGTCAGAGGCAGGCATGGCTGTGCAGAAGTCTCACCCCAAGAGGGTCTGTGGGGAGCTCTaGGTTGGAGGCACAGGGCCA +
Preference number: 4 (lower is better)
Translates to: KVDWSEAGMAVQKSHPKRVCGEL*VGGTGP
Trigger: TGGCCCTGTGCCTCCAACCCAGAGCTCCCCACAGAC...CCTCTTGGGGTGAGACTTCTGCACAGCCATGCCTGCCTCTGACCAGTCCACTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR TCA 90 bp ATTTTTCCAGCGACAGATGGCCCACTGCTCAGCCCTGGCTCCAGAATGCAAAAGCCTGCCTTCAGGCCCTaGGCATCTGGCTGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: IFPATDGPLLSPGSRMQKPAFRP*ASGWVE
Trigger: CTCCACCCAGCCAGATGCTCAGGGCCTGAAGGCAGG...CTTTTGCATTCTGGAGCCAGGGCTGAGCAGTGGGCCATCTGTCGCTGGAAAAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR GCA 90 bp CAGGTGACACAGTGTGGACTAAGGAGTCCCCTGAATAAGCCAGGGTACCCTTCTGGGTCCTCTTCCCACTaGTCTGTGGCCAGGGCACCC +
Preference number: 4 (lower is better)
Translates to: QVTQCGLRSPLNKPGYPSGSSSH*SVARAP
Trigger: GGGTGCCCTGGCCACAGAGCAGTGGGAAGAGGACCC...AGAAGGGTACCCTGGCTTATTCAGGGGACTCCTTAGTCCACACTGTGTCACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR CCA 90 bp AACATGAAAAGTGGACTGGTCAGAGGCAGGCATGGCTGTGCAGAAGTCTCACCCGGCCCCGAGGGGCCATaGCAAAGTCGCCCTCTACCT +
Preference number: 4 (lower is better)
Translates to: NMKSGLVRGRHGCAEVSPGPEGP*QSRPLP
Trigger: AGGTAGAGGGCGACTTTGCCATGGCCCCTCGGGGCC...GGGTGAGACTTCTGCACAGCCATGCCTGCCTCTGACCAGTCCACTTTTCATGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR CCA 90 bp CCACATAAGGGTTCAAACTTCCGCCTCCCTCAGGGAAGCCTGGGGAAAGGGATGGCACAGTCTGCATACTaGGGCTCCGACTGCATGGGG +
Preference number: 4 (lower is better)
Translates to: PHKGSNFRLPQGSLGKGMAQSAY*GSDCMG
Trigger: CCCCATGCAGTCGGAGCCCCAGTATGCAGACTGTGC...CATCCCTTTCCCCAGGCTTCCCTGAGGGAGGCGGAAGTTTGAACCCTTATGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR CCA 90 bp TCCACAGTCTCTGATCCAGTGAGCTCTTCTGGAAGAGAAGCTCTCTTCCCCTGGGGAGCTGGGCCACAGTaGGGCCTGCAGCTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: STVSDPVSSSGREALFPWGAGPQ*GLQLPL
Trigger: CAGAGGAAGCTGCAGGCCCCACTGTGGCCCAGCTCC...CCAGGGGAAGAGAGCTTCTCTTCCAGAAGAGCTCACTGGATCAGAGACTGTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251089.8
ENST00000557179.5
CDS-3UTR CCA 90 bp CCACTTTGCACAGACCCTCCTGAAGTGCAGAAGATACTAGGAGGAGGCATGGGGCTGGGAGCCCTGTCATaGGGCGGTGACTTCCATCCC +
Preference number: 4 (lower is better)
Translates to: PLCTDPPEVQKILGGGMGLGALS*GGDFHP
Trigger: GGGATGGAAGTCACCGCCCCATGACAGGGCTCCCAG...CCCCATGCCTCCTCCTAGTATCTTCTGCACTTCAGGAGGGTCTGTGCAAAGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR TCA 90 bp TCCACAGTCTCTGATCCAGTGAGCTCTTCTGGAAGAGAAGCTCTCTTCCCCTGGCCTGTCATGGGGCGGTaGCTTCCATCCCGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: STVSDPVSSSGREALFPWPVMGR*LPSRSW
Trigger: CCAGCTTCGGGATGGAAGTCACCGCCCCATGACAGG...CCAGGGGAAGAGAGCTTCTCTTCCAGAAGAGCTCACTGGATCAGAGACTGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251089.8
ENST00000557179.5
CDS-3UTR TCA 90 bp CCACATAAGGGTTCAAACTTCCGCCTCCCTCAGGGAAGCCTGGGGAAAGGGATGGGCCAGCAGCCACTCTaGCTTAGGGAGATGTGTGGA +
Preference number: 4 (lower is better)
Translates to: PHKGSNFRLPQGSLGKGMGQQPL*LREMCG
Trigger: TCCACACATCTCCCTAAGTCAGAGTGGCTGCTGGCC...CATCCCTTTCCCCAGGCTTCCCTGAGGGAGGCGGAAGTTTGAACCCTTATGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR GCA 90 bp GAAAGGGATGGCCCTTGTGAAATTACACCAGGTCTGTGGGGAGCTCTGGGTTGGTACTGGGGCTCCGACTaGATGGGGATAGCTGCCCAC +
Preference number: 4 (lower is better)
Translates to: ERDGPCEITPGLWGALGWYWGSD*MGIAAH
Trigger: GTGGGCAGCTATCCCCATGCAGTCGGAGCCCCAGTA...CCAACCCAGAGCTCCCCACAGACCTGGTGTAATTTCACAAGGGCCATCCCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR GCA 90 bp ACCACAGGCAGAGAACGCAGCCAGGCCTGGAGAAAGTCTAACCGTGGGAAAAAGCAGGCTCAGGTGCTATaGTCCAGGCCAACACCGCTG +
Preference number: 4 (lower is better)
Translates to: TTGRERSQAWRKSNRGKKQAQVL*SRPTPL
Trigger: CAGCGGTGTTGGCCTGGAGCATAGCACCTGAGCCTG...CTTTTTCCCACGGTTAGACTTTCTCCAGGCCTGGCTGCGTTCTCTGCCTGTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR CCA 90 bp AAAGTGGACTGGTCAGAGGCAGGCATGGCTGTGCAGAAGTCTCACCCCAAGAGGCAGGCTGGCATCCCATaGTACTGGAGCTCTCCATCC +
Preference number: 4 (lower is better)
Translates to: KVDWSEAGMAVQKSHPKRQAGIP*YWSSPS
Trigger: GGATGGAGAGCTCCAGTACCATGGGATGCCAGCCTG...CCTCTTGGGGTGAGACTTCTGCACAGCCATGCCTGCCTCTGACCAGTCCACTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR CCA 90 bp CCACTTTGCACAGACCCTCCTGAAGTGCAGAAGATACTAGGAGGAGGCATGGGGTCTGGGCGGCCACGCTaGGGCAGGAAGTGGGTATAT +
Preference number: 4 (lower is better)
Translates to: PLCTDPPEVQKILGGGMGSGRPR*GRKWVY
Trigger: ATATACCCACTTCCTGCCCCAGCGTGGCCGCCCAGA...CCCCATGCCTCCTCCTAGTATCTTCTGCACTTCAGGAGGGTCTGTGCAAAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR CCA 90 bp AGAGAACGCAGCCAGGCCTGGAGAAAGTCTAACCGTGGGAAAAAGGGAACGAGGTCTGGGCGGCCACGCTaGGGCAGGAAGTGGGTATAT +
Preference number: 4 (lower is better)
Translates to: RERSQAWRKSNRGKKGTRSGRPR*GRKWVY
Trigger: ATATACCCACTTCCTGCCCCAGCGTGGCCGCCCAGA...CCTCGTTCCCTTTTTCCCACGGTTAGACTTTCTCCAGGCCTGGCTGCGTTCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251089.8
ENST00000557179.5
CDS-3UTR CCA 90 bp CTGAATAAGCCAGGGTACCCTTCTGTTAGGGGAGGGAAAGCAGACGCAACAAGCGAAGCTCTCTTCCCCTaGGAGCCCTGTCATGGGGCG +
Preference number: 4 (lower is better)
Translates to: LNKPGYPSVRGGKADATSEALFP*EPCHGA
Trigger: CGCCCCATGACAGGGCTCCCAGGGGAAGAGAGCTTC...GCTTGTTGCGTCTGCTTTCCCTCCCCTAACAGAAGGGTACCCTGGCTTATTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR CCA 90 bp TCCACAGTCTCTGATCCAGTGAGCTCTTCTGGAAGAGAAGCTCTCTTCCCCTGGGAAGCTCTCTTCCCCTaGGAGCCCTGTCATGGGGCG +
Preference number: 4 (lower is better)
Translates to: STVSDPVSSSGREALFPWEALFP*EPCHGA
Trigger: CGCCCCATGACAGGGCTCCCAGGGGAAGAGAGCTTC...CCAGGGGAAGAGAGCTTCTCTTCCAGAAGAGCTCACTGGATCAGAGACTGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251089.8
ENST00000557179.5
CDS-3UTR CCA 90 bp GGGAGGGAAAGCAGACGCAACAAGCAGCTGAGGCCTTGCTGGACAGAGCCAATCATCAAGGGGGAGCGCTaGATACATGGAAGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: GRESRRNKQLRPCWTEPIIKGER*IHGRKG
Trigger: CCCCTTCCTTCCATGTATCCAGCGCTCCCCCTTGAT...GATTGGCTCTGTCCAGCAAGGCCTCAGCTGCTTGTTGCGTCTGCTTTCCCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR CCA 90 bp CCACATAAGGGTTCAAACTTCCGCCTCCCTCAGGGAAGCCTGGGGAAAGGGATGGGTCAGAGGCAGGCATaGCTGTGCAGAAGTCTCACC +
Preference number: 4 (lower is better)
Translates to: PHKGSNFRLPQGSLGKGMGQRQA*LCRSLT
Trigger: GGTGAGACTTCTGCACAGCCATGCCTGCCTCTGACC...CATCCCTTTCCCCAGGCTTCCCTGAGGGAGGCGGAAGTTTGAACCCTTATGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR CCA 90 bp AAAGTGGACTGGTCAGAGGCAGGCATGGCTGTGCAGAAGTCTCACCCCAAGAGGTTTTCCAGCGACAGATaGCCCACTGCTCAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: KVDWSEAGMAVQKSHPKRFSSDR*PTAQPW
Trigger: CCAGGGCTGAGCAGTGGGCCATCTGTCGCTGGAAAA...CCTCTTGGGGTGAGACTTCTGCACAGCCATGCCTGCCTCTGACCAGTCCACTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR TCA 90 bp CCTGTTCCTCCCAGGCCTCACAGCAGTGGGAATTTACCTCAGCTAATAGAGGGAGCAGTGGCTGCCATCTaGCAGTCTGGCCACCTTGTC +
Preference number: 4 (lower is better)
Translates to: PVPPRPHSSGNLPQLIEGAVAAI*QSGHLV
Trigger: GACAAGGTGGCCAGACTGTCAGATGGCAGCCACTGC...TCCCTCTATTAGCTGAGGTAAATTCCCACTGCTGTGAGGCCTGGGAGGAACAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR GCA 90 bp ACCACAGGCAGAGAACGCAGCCAGGCCTGGAGAAAGTCTAACCGTGGGAAAAAGCCTTCTTCTCGCCACTaGTGCAGCAGGCCCTCACAT +
Preference number: 4 (lower is better)
Translates to: TTGRERSQAWRKSNRGKKPSSRH*CSRPSH
Trigger: ATGTGAGGGCCTGCTGCAGCAGTGGCGAGAAGAAGG...CTTTTTCCCACGGTTAGACTTTCTCCAGGCCTGGCTGCGTTCTCTGCCTGTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR GCA 90 bp TCCACAGTCTCTGATCCAGTGAGCTCTTCTGGAAGAGAAGCTCTCTTCCCCTGGCTGCATGGGGATAGCTaGCCACATGGAGCCCTCCAC +
Preference number: 4 (lower is better)
Translates to: STVSDPVSSSGREALFPWLHGDS*PHGALH
Trigger: GTGGAGGGCTCCATGTGGGCAGCTATCCCCATGCAG...CCAGGGGAAGAGAGCTTCTCTTCCAGAAGAGCTCACTGGATCAGAGACTGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR GCA 90 bp AACATGAAAAGTGGACTGGTCAGAGGCAGGCATGGCTGTGCAGAAGTCTCACCCGAGGGCAGCACAGTCTaGATACTGGGGCTCCGACTG +
Preference number: 4 (lower is better)
Translates to: NMKSGLVRGRHGCAEVSPEGSTV*ILGLRL
Trigger: CAGTCGGAGCCCCAGTATGCAGACTGTGCTGCCCTC...GGGTGAGACTTCTGCACAGCCATGCCTGCCTCTGACCAGTCCACTTTTCATGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR GCA 90 bp TCCACAGTCTCTGATCCAGTGAGCTCTTCTGGAAGAGAAGCTCTCTTCCCCTGGGGGGCCATGCCCTGCTaGTGCCTGCTCATACATAGG +
Preference number: 4 (lower is better)
Translates to: STVSDPVSSSGREALFPWGAMPC*CLLIHR
Trigger: CCTATGTATGAGCAGGCAGCAGCAGGGCATGGCCCC...CCAGGGGAAGAGAGCTTCTCTTCCAGAAGAGCTCACTGGATCAGAGACTGTGGA
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR CCA 90 bp ACCACAGGCAGAGAACGCAGCCAGGCCTGGAGAAAGTCTAACCGTGGGAAAAAGCAGGCCCTGAGCATCTaGCTGGGTGGAGAAATCCTC +
Preference number: 4 (lower is better)
Translates to: TTGRERSQAWRKSNRGKKQALSI*LGGEIL
Trigger: GAGGATTTCTCCACCCAGCCAGATGCTCAGGGCCTG...CTTTTTCCCACGGTTAGACTTTCTCCAGGCCTGGCTGCGTTCTCTGCCTGTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR CCA 90 bp TGGACTGGTCAGAGGCAGGCATGGCTGTGCAGAAGTCTCACCCCAAGAGGACACTGGTACCTACAGTCCTaGAGAAGGCAGGCTCAAGCT +
Preference number: 4 (lower is better)
Translates to: WTGQRQAWLCRSLTPRGHWYLQS*RRQAQA
Trigger: AGCTTGAGCCTGCCTTCTCCAGGACTGTAGGTACCA...GTGTCCTCTTGGGGTGAGACTTCTGCACAGCCATGCCTGCCTCTGACCAGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR CCA 90 bp ACCACAGGCAGAGAACGCAGCCAGGCCTGGAGAAAGTCTAACCGTGGGAAAAAGGAACGCAGCCAGGCCTaGAGAAAGTCTAACCGTGGG +
Preference number: 4 (lower is better)
Translates to: TTGRERSQAWRKSNRGKKERSQA*RKSNRG
Trigger: CCCACGGTTAGACTTTCTCCAGGCCTGGCTGCGTTC...CTTTTTCCCACGGTTAGACTTTCTCCAGGCCTGGCTGCGTTCTCTGCCTGTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251089.8
ENST00000557179.5
CDS-3UTR CCA 90 bp GAAAGGGATGGCCCTTGTGAAATTACACCAGGTCTGTGGGGAGCTCTGGGTTGGTCACATATGCATGCCTaGCAAGAGGGCTGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: ERDGPCEITPGLWGALGWSHMHA*QEGWAQ
Trigger: CTGGGCCCAGCCCTCTTGCCAGGCATGCATATGTGA...CCAACCCAGAGCTCCCCACAGACCTGGTGTAATTTCACAAGGGCCATCCCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR TCA 90 bp TCCACAGTCTCTGATCCAGTGAGCTCTTCTGGAAGAGAAGCTCTCTTCCCCTGGCTCTCCCAGGGCCACTaGGTGTGTGGCACAGGATTA +
Preference number: 4 (lower is better)
Translates to: STVSDPVSSSGREALFPWLSQGH*VCGTGL
Trigger: TAATCCTGTGCCACACACTCAGTGGCCCTGGGAGAG...CCAGGGGAAGAGAGCTTCTCTTCCAGAAGAGCTCACTGGATCAGAGACTGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251089.8
ENST00000557179.5
CDS-3UTR TCA 90 bp TCCACAGTCTCTGATCCAGTGAGCTCTTCTGGAAGAGAAGCTCTCTTCCCCTGGCTCGGTCAAAGCCAATaGGCAGCCTGGGAACGGACA +
Preference number: 4 (lower is better)
Translates to: STVSDPVSSSGREALFPWLGQSQ*AAWERT
Trigger: TGTCCGTTCCCAGGCTGCTCATTGGCTTTGACCGAG...CCAGGGGAAGAGAGCTTCTCTTCCAGAAGAGCTCACTGGATCAGAGACTGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557179.5
CDS-3UTR CCA 90 bp ATTTTTCCAGCGACAGATGGCCCACTGCTCAGCCCTGGCTCCAGAATGCAAAAGAGGAGAATGGCCATCTaGGCCAGCTTGACATCGCCC +
Preference number: 4 (lower is better)
Translates to: IFPATDGPLLSPGSRMQKRRMAI*ASLTSP
Trigger: GGGCGATGTCAAGCTGGCCCAGATGGCCATTCTCCT...CTTTTGCATTCTGGAGCCAGGGCTGAGCAGTGGGCCATCTGTCGCTGGAAAAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR CCA 90 bp ACCACAGGCAGAGAACGCAGCCAGGCCTGGAGAAAGTCTAACCGTGGGAAAAAGACCCGCAGGTCGCTCTaGCTTAGTATCTGTCACTCC +
Preference number: 4 (lower is better)
Translates to: TTGRERSQAWRKSNRGKKTRRSL*LSICHS
Trigger: GGAGTGACAGATACTAAGCCAGAGCGACCTGCGGGT...CTTTTTCCCACGGTTAGACTTTCTCCAGGCCTGGCTGCGTTCTCTGCCTGTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251089.8
ENST00000557179.5
CDS-3UTR CCA 90 bp GAAAGGGATGGCCCTTGTGAAATTACACCAGGTCTGTGGGGAGCTCTGGGTTGGAGGTGGAGGCAGTGCTaGATGGTACCTACAGTCCTG +
Preference number: 4 (lower is better)
Translates to: ERDGPCEITPGLWGALGWRWRQC*MVPTVL
Trigger: CAGGACTGTAGGTACCATCCAGCACTGCCTCCACCT...CCAACCCAGAGCTCCCCACAGACCTGGTGTAATTTCACAAGGGCCATCCCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR CCA 90 bp AACATGAAAAGTGGACTGGTCAGAGGCAGGCATGGCTGTGCAGAAGTCTCACCCGAACGCAGCCAGGCCTaGAGAAAGTCTAACCGTGGG +
Preference number: 4 (lower is better)
Translates to: NMKSGLVRGRHGCAEVSPERSQA*RKSNRG
Trigger: CCCACGGTTAGACTTTCTCCAGGCCTGGCTGCGTTC...GGGTGAGACTTCTGCACAGCCATGCCTGCCTCTGACCAGTCCACTTTTCATGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR CCA 90 bp AGAGAACGCAGCCAGGCCTGGAGAAAGTCTAACCGTGGGAAAAAGGGAACGAGGGGGCCACTGAGTGTGTaGCACAGGATTAGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: RERSQAWRKSNRGKKGTRGPLSV*HRIRKR
Trigger: CCTCTTCCTAATCCTGTGCCACACACTCAGTGGCCC...CCTCGTTCCCTTTTTCCCACGGTTAGACTTTCTCCAGGCCTGGCTGCGTTCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000251089.8
ENST00000557179.5
CDS-3UTR CCA 90 bp CCACTTTGCACAGACCCTCCTGAAGTGCAGAAGATACTAGGAGGAGGCATGGGGATTACACCAGGTCTGTaGGGAGCTCTGGGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: PLCTDPPEVQKILGGGMGITPGL*GALGWR
Trigger: CCTCCAACCCAGAGCTCCCCACAGACCTGGTGTAAT...CCCCATGCCTCCTCCTAGTATCTTCTGCACTTCAGGAGGGTCTGTGCAAAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR TCA 90 bp AAGCCCTGTTCCTCCCAGGCCTCACAGCAGTGGGAATTTACCTCAGCTAATAGATGTGAAGAAAGCATCTaGGAGGGCGCGGAAGAGGCG +
Preference number: 4 (lower is better)
Translates to: KPCSSQASQQWEFTSANRCEESI*EGAEEA
Trigger: CGCCTCTTCCGCGCCCTCTCAGATGCTTTCTTCACA...TCTATTAGCTGAGGTAAATTCCCACTGCTGTGAGGCCTGGGAGGAACAGGGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR TCA 90 bp ACCACAGGCAGAGAACGCAGCCAGGCCTGGAGAAAGTCTAACCGTGGGAAAAAGCAGGAGGTGACATACTaGCAGCAATCAGTGATGCCC +
Preference number: 4 (lower is better)
Translates to: TTGRERSQAWRKSNRGKKQEVTY*QQSVMP
Trigger: GGGCATCACTGATTGCTGTCAGTATGTCACCTCCTG...CTTTTTCCCACGGTTAGACTTTCTCCAGGCCTGGCTGCGTTCTCTGCCTGTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251089.8
ENST00000557179.5
CDS-3UTR TCA 90 bp TCCACAGTCTCTGATCCAGTGAGCTCTTCTGGAAGAGAAGCTCTCTTCCCCTGGAGTCCTACTGGTCGCTaGCAAGCGATGCTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: STVSDPVSSSGREALFPWSPTGR*QAMLQK
Trigger: CTTCTGCAGCATCGCTTGTCAGCGACCAGTAGGACT...CCAGGGGAAGAGAGCTTCTCTTCCAGAAGAGCTCACTGGATCAGAGACTGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251089.8
ENST00000557179.5
CDS-3UTR GCA 90 bp AGAGAACGCAGCCAGGCCTGGAGAAAGTCTAACCGTGGGAAAAAGGGAACGAGGGCTGACAAGCGATGCTaGAGAAGCGGAAACGTAGCA +
Preference number: 4 (lower is better)
Translates to: RERSQAWRKSNRGKKGTRADKRC*RSGNVA
Trigger: TGCTACGTTTCCGCTTCTGCAGCATCGCTTGTCAGC...CCTCGTTCCCTTTTTCCCACGGTTAGACTTTCTCCAGGCCTGGCTGCGTTCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251089.8
ENST00000557179.5
CDS-3UTR GCA 90 bp GCAGCTGAGGCCTTGCTGGACAGAGCCAATCCGCAAGTACTGCCACTTCAAATTGTCAGGTGGAGGCAGTaGTGGATGGTACCTACAGTC +
Preference number: 4 (lower is better)
Translates to: AAEALLDRANPQVLPLQIVRWRQ*WMVPTV
Trigger: GACTGTAGGTACCATCCAGCACTGCCTCCACCTGAC...AATTTGAAGTGGCAGTACTTGCGGATTGGCTCTGTCCAGCAAGGCCTCAGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR CCA 90 bp AACATGAAAAGTGGACTGGTCAGAGGCAGGCATGGCTGTGCAGAAGTCTCACCCGCAGTTGAGAGCACCTaGCTCAACCCTTCTTCTCGC +
Preference number: 4 (lower is better)
Translates to: NMKSGLVRGRHGCAEVSPAVEST*LNPSSR
Trigger: GCGAGAAGAAGGGTTGAGCCAGGTGCTCTCAACTGC...GGGTGAGACTTCTGCACAGCCATGCCTGCCTCTGACCAGTCCACTTTTCATGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR CCA 90 bp GAAAGGGATGGCCCTTGTGAAATTACACCAGGTCTGTGGGGAGCTCTGGGTTGGAAGATGATGGGGCAGTaGCTGCCATCTGACAGTCTG +
Preference number: 4 (lower is better)
Translates to: ERDGPCEITPGLWGALGWKMMGQ*LPSDSL
Trigger: CAGACTGTCAGATGGCAGCCACTGCCCCATCATCTT...CCAACCCAGAGCTCCCCACAGACCTGGTGTAATTTCACAAGGGCCATCCCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR CCA 90 bp AGAGAACGCAGCCAGGCCTGGAGAAAGTCTAACCGTGGGAAAAAGGGAACGAGGAGATACCTTCCAGGCTaGCATCCCATGGTACTGGAG +
Preference number: 4 (lower is better)
Translates to: RERSQAWRKSNRGKKGTRRYLPG*HPMVLE
Trigger: CTCCAGTACCATGGGATGCCAGCCTGGAAGGTATCT...CCTCGTTCCCTTTTTCCCACGGTTAGACTTTCTCCAGGCCTGGCTGCGTTCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR CCA 90 bp GCAGCTGAGGCCTTGCTGGACAGAGCCAATCCGCAAGTACTGCCACTTCAAATTACCCGCAGGTCGCTCTaGCTTAGTATCTGTCACTCC +
Preference number: 4 (lower is better)
Translates to: AAEALLDRANPQVLPLQITRRSL*LSICHS
Trigger: GGAGTGACAGATACTAAGCCAGAGCGACCTGCGGGT...AATTTGAAGTGGCAGTACTTGCGGATTGGCTCTGTCCAGCAAGGCCTCAGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR CCA 90 bp TCCACAGTCTCTGATCCAGTGAGCTCTTCTGGAAGAGAAGCTCTCTTCCCCTGGAGGTGGAGGCAGTGCTaGATGGTACCTACAGTCCTG +
Preference number: 4 (lower is better)
Translates to: STVSDPVSSSGREALFPWRWRQC*MVPTVL
Trigger: CAGGACTGTAGGTACCATCCAGCACTGCCTCCACCT...CCAGGGGAAGAGAGCTTCTCTTCCAGAAGAGCTCACTGGATCAGAGACTGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251089.8
ENST00000557179.5
CDS-3UTR CCA 90 bp GAGGAGGGGGAAGGGAGGGGATGTAAGTTTCTTGGATCTAAGTTTCTAGATGCACATTGTAGTGACCTCTaGGCGGCCACGCTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: EEGEGRGCKFLGSKFLDAHCSDL*AATLGQ
Trigger: CTGCCCCAGCGTGGCCGCCCAGAGGTCACTACAATG...TGCATCTAGAAACTTAGATCCAAGAAACTTACATCCCCTCCCTTCCCCCTCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000251089.8
ENST00000557179.5
CDS-3UTR CCA 90 bp TCCACAGTCTCTGATCCAGTGAGCTCTTCTGGAAGAGAAGCTCTCTTCCCCTGGGGGCCACTGAGTGTGTaGCACAGGATTAGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: STVSDPVSSSGREALFPWGPLSV*HRIRKR
Trigger: CCTCTTCCTAATCCTGTGCCACACACTCAGTGGCCC...CCAGGGGAAGAGAGCTTCTCTTCCAGAAGAGCTCACTGGATCAGAGACTGTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251089.8
ENST00000557179.5
CDS-3UTR CCA 90 bp CCTGTTCCTCCCAGGCCTCACAGCAGTGGGAATTTACCTCAGCTAATAGAGGGATGCCACTCCAGGATGTaGGCCCCATTTGTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: PVPPRPHSSGNLPQLIEGCHSRM*APFVPR
Trigger: TCTGGGAACAAATGGGGCCCACATCCTGGAGTGGCA...TCCCTCTATTAGCTGAGGTAAATTCCCACTGCTGTGAGGCCTGGGAGGAACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR CCA 90 bp CCACTTTGCACAGACCCTCCTGAAGTGCAGAAGATACTAGGAGGAGGCATGGGGGCAGGTGACACAGTGTaGACTAAGGAGTCCCCTGAA +
Preference number: 4 (lower is better)
Translates to: PLCTDPPEVQKILGGGMGAGDTV*TKESPE
Trigger: TTCAGGGGACTCCTTAGTCCACACTGTGTCACCTGC...CCCCATGCCTCCTCCTAGTATCTTCTGCACTTCAGGAGGGTCTGTGCAAAGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR CCA 90 bp ATTTTTCCAGCGACAGATGGCCCACTGCTCAGCCCTGGCTCCAGAATGCAAAAGCTCCCAGTGGGCATGTaGGCTTGGCTGGTCTTACTA +
Preference number: 4 (lower is better)
Translates to: IFPATDGPLLSPGSRMQKLPVGM*AWLVLL
Trigger: TAGTAAGACCAGCCAAGCCCACATGCCCACTGGGAG...CTTTTGCATTCTGGAGCCAGGGCTGAGCAGTGGGCCATCTGTCGCTGGAAAAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR CCA 90 bp CCACTTTGCACAGACCCTCCTGAAGTGCAGAAGATACTAGGAGGAGGCATGGGGTTCAGAGGCCTGGTGTaGGTTCTGGGAACCTGTTCA +
Preference number: 4 (lower is better)
Translates to: PLCTDPPEVQKILGGGMGFRGLV*VLGTCS
Trigger: TGAACAGGTTCCCAGAACCCACACCAGGCCTCTGAA...CCCCATGCCTCCTCCTAGTATCTTCTGCACTTCAGGAGGGTCTGTGCAAAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR CCA 90 bp TCCACAGTCTCTGATCCAGTGAGCTCTTCTGGAAGAGAAGCTCTCTTCCCCTGGTTGGTCAGGCTGGTCTaGAACTCTCGACCTCAGGTG +
Preference number: 4 (lower is better)
Translates to: STVSDPVSSSGREALFPWLVRLV*NSRPQV
Trigger: CACCTGAGGTCGAGAGTTCCAGACCAGCCTGACCAA...CCAGGGGAAGAGAGCTTCTCTTCCAGAAGAGCTCACTGGATCAGAGACTGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR CCA 90 bp CAGGTGACACAGTGTGGACTAAGGAGTCCCCTGAATAAGCCAGGGTACCCTTCTCAGCCTCCAAGTAGCTaGGATTACAGGCATGCGCCA +
Preference number: 4 (lower is better)
Translates to: QVTQCGLRSPLNKPGYPSQPPSS*DYRHAP
Trigger: TGGCGCATGCCTGTAATCCCAGCTACTTGGAGGCTG...AGAAGGGTACCCTGGCTTATTCAGGGGACTCCTTAGTCCACACTGTGTCACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR TCA 90 bp CGCAAGTACTGCCACTTCAAATTCTTGGACCAGTTTTGTCCAAGGCCACCTTTCCCCCTCACTTGCAGTTaGGAGCACCTGGCTCAACCC +
Preference number: 4 (lower is better)
Translates to: RKYCHFKFLDQFCPRPPFPLTCS*EHLAQP
Trigger: GGGTTGAGCCAGGTGCTCTCAACTGCAAGTGAGGGG...GAAAGGTGGCCTTGGACAAAACTGGTCCAAGAATTTGAAGTGGCAGTACTTGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR TCA 90 bp TCCACAGTCTCTGATCCAGTGAGCTCTTCTGGAAGAGAAGCTCTCTTCCCCTGGGACGACCCAGGAGCTTaGGAGTTCCATCTCGATACA +
Preference number: 4 (lower is better)
Translates to: STVSDPVSSSGREALFPWDDPGA*EFHLDT
Trigger: TGTATCGAGATGGAACTCTCAAGCTCCTGGGTCGTC...CCAGGGGAAGAGAGCTTCTCTTCCAGAAGAGCTCACTGGATCAGAGACTGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251089.8
ENST00000557179.5
CDS-3UTR GCA 90 bp GGCAGGGAAAAGGTCAGGTCAGAAGGTACATCAAGAAACGGCCTGAAAGCAAATGGTCACTCAGCTGCCTaGTGGACCACCTGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: GREKVRSEGTSRNGLKANGHSAA*WTTCPL
Trigger: CAGAGGACAGGTGGTCCAGCAGGCAGCTGAGTGACC...ATTTGCTTTCAGGCCGTTTCTTGATGTACCTTCTGACCTGACCTTTTCCCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR GCA 90 bp GGCAGGGAAAAGGTCAGGTCAGAAGGTACATCAAGAAACGGCCTGAAAGCAAATGGGCACAGGCTCAGGTaGTATGCTCCAGGCCAACAC +
Preference number: 4 (lower is better)
Translates to: GREKVRSEGTSRNGLKANGHRLR*YAPGQH
Trigger: GTGTTGGCCTGGAGCATAGCACCTGAGCCTGTGCCC...ATTTGCTTTCAGGCCGTTTCTTGATGTACCTTCTGACCTGACCTTTTCCCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR GCA 90 bp AACATGAAAAGTGGACTGGTCAGAGGCAGGCATGGCTGTGCAGAAGTCTCACCCGCTGACAAGCGATGCTaGAGAAGCGGAAACGTAGCA +
Preference number: 4 (lower is better)
Translates to: NMKSGLVRGRHGCAEVSPADKRC*RSGNVA
Trigger: TGCTACGTTTCCGCTTCTGCAGCATCGCTTGTCAGC...GGGTGAGACTTCTGCACAGCCATGCCTGCCTCTGACCAGTCCACTTTTCATGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR GCA 90 bp CCTGTTCCTCCCAGGCCTCACAGCAGTGGGAATTTACCTCAGCTAATAGAGGGAGTCGCTGACAAGCGATaGTGCAGAAGCGGAAACGTA +
Preference number: 4 (lower is better)
Translates to: PVPPRPHSSGNLPQLIEGVADKR*CRSGNV
Trigger: TACGTTTCCGCTTCTGCAGCATCGCTTGTCAGCGAC...TCCCTCTATTAGCTGAGGTAAATTCCCACTGCTGTGAGGCCTGGGAGGAACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR GCA 90 bp AGAGAACGCAGCCAGGCCTGGAGAAAGTCTAACCGTGGGAAAAAGGGAACGAGGAGGCTCAAGCTCCGATaGATCTTCCTCAAGGACAGA +
Preference number: 4 (lower is better)
Translates to: RERSQAWRKSNRGKKGTRRLKLR*IFLKDR
Trigger: TCTGTCCTTGAGGAAGATGCATCGGAGCTTGAGCCT...CCTCGTTCCCTTTTTCCCACGGTTAGACTTTCTCCAGGCCTGGCTGCGTTCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251089.8
ENST00000557179.5
CDS-3UTR GCA 90 bp CAGGTGACACAGTGTGGACTAAGGAGTCCCCTGAATAAGCCAGGGTACCCTTCTTCAGCAAGAGGCATGTaGCACCCGCATCATGTCTCA +
Preference number: 4 (lower is better)
Translates to: QVTQCGLRSPLNKPGYPSSARGM*HPHHVS
Trigger: TGAGACATGATGCGGGTGGCACATGCCTCTTGCTGA...AGAAGGGTACCCTGGCTTATTCAGGGGACTCCTTAGTCCACACTGTGTCACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR GCA 90 bp CCACATAAGGGTTCAAACTTCCGCCTCCCTCAGGGAAGCCTGGGGAAAGGGATGTTCAAGCAATTCTCCTaGCTCAGCCTCCAAGTAGCT +
Preference number: 4 (lower is better)
Translates to: PHKGSNFRLPQGSLGKGMFKQFS*LSLQVA
Trigger: AGCTACTTGGAGGCTGAGGCAGGAGAATTGCTTGAA...CATCCCTTTCCCCAGGCTTCCCTGAGGGAGGCGGAAGTTTGAACCCTTATGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR GCA 90 bp ATTTTTCCAGCGACAGATGGCCCACTGCTCAGCCCTGGCTCCAGAATGCAAAAGTTGTCCAGGCTGGAGTaGAATGGCATGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: IFPATDGPLLSPGSRMQKLSRLE*NGMISA
Trigger: AGCCGAGATCATGCCATTGCACTCCAGCCTGGACAA...CTTTTGCATTCTGGAGCCAGGGCTGAGCAGTGGGCCATCTGTCGCTGGAAAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR CCA 90 bp CTGAATAAGCCAGGGTACCCTTCTGTTAGGGGAGGGAAAGCAGACGCAACAAGCTCAGGGTCCCAGTGCTaGAATTCCTGCATGAGGTTC +
Preference number: 4 (lower is better)
Translates to: LNKPGYPSVRGGKADATSSGSQC*NSCMRF
Trigger: GAACCTCATGCAGGAATTCCAGCACTGGGACCCTGA...GCTTGTTGCGTCTGCTTTCCCTCCCCTAACAGAAGGGTACCCTGGCTTATTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR CCA 90 bp GATTCAGAGGCCTGGTGTGGGTTCTGGGAACCTGTTCAGGTAAGACAGAAAACCGACATCGCCCCGGCGTaGGTTGTAAAGGATATGGGT +
Preference number: 4 (lower is better)
Translates to: DSEAWCGFWEPVQVRQKTDIAPA*VVKDMG
Trigger: ACCCATATCCTTTACAACCCACGCCGGGGCGATGTC...GGTTTTCTGTCTTACCTGAACAGGTTCCCAGAACCCACACCAGGCCTCTGAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR CCA 90 bp CCACTTTGCACAGACCCTCCTGAAGTGCAGAAGATACTAGGAGGAGGCATGGGGGGTTGGGTAAGCCATTaGCAGCCCAGAGTATCTCTT +
Preference number: 4 (lower is better)
Translates to: PLCTDPPEVQKILGGGMGGWVSH*QPRVSL
Trigger: AAGAGATACTCTGGGCTGCCAATGGCTTACCCAACC...CCCCATGCCTCCTCCTAGTATCTTCTGCACTTCAGGAGGGTCTGTGCAAAGTGG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR CCA 90 bp AATCAGGAAAACACACATCTTATCCCACTTTGCACAGACCCTCCTGAAGTGCAGGGAGCGCTGGATACATaGAAGGAAGGGGGAGCCCCC +
Preference number: 4 (lower is better)
Translates to: NQENTHLIPLCTDPPEVQGALDT*KEGGAP
Trigger: GGGGGCTCCCCCTTCCTTCCATGTATCCAGCGCTCC...CTGCACTTCAGGAGGGTCTGTGCAAAGTGGGATAAGATGTGTGTTTTCCTGATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251089.8
3UTR CAA 72 bp CTTAACCCCTGGCTTACTGTCCCGAACTCAAGTCTCTaGACCACTGTCTTCAGTCCCACTTTGGAGGTCGAG +
Preference number: 4 (lower is better)
Translates to: LNPWLTVPNSSL*TTVFSPTLEVE
Trigger: CTCGACCTCCAAAGTGGGACTGAAGACAGTGGTCAAGAGACTTGAGTTCGGGACAGTAAGCCAGGGGTTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
3UTR CAA 72 bp GCATGTGGGCTTGGCTGGTCTTACTACATAGGGAGGTaGGAAGACAAAAGCACCAACAGAGGTAGGCCTAGG +
Preference number: 4 (lower is better)
Translates to: ACGLGWSYYIGR*EDKSTNRGRPR
Trigger: CCTAGGCCTACCTCTGTTGGTGCTTTTGTCTTCCAACCTCCCTATGTAGTAAGACCAGCCAAGCCCACATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR TCA 90 bp GAAGGGAGGGGATGTAAGTTTCTTGGATCTAAGTTTCTAGATGCATGGGATTTTCCATCTGGGCCAGCTTaGCATCGCCCCGGCGTGGGT +
Preference number: 4 (lower is better)
Translates to: EGRGCKFLGSKFLDAWDFPSGPA*HRPGVG
Trigger: ACCCACGCCGGGGCGATGTCAAGCTGGCCCAGATGG...AAAATCCCATGCATCTAGAAACTTAGATCCAAGAAACTTACATCCCCTCCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR TCA 90 bp TCCACAGTCTCTGATCCAGTGAGCTCTTCTGGAAGAGAAGCTCTCTTCCCCTGGCAGTCTCTGATCCAGTaGGCTCTTCTGGAAGAGAAG +
Preference number: 4 (lower is better)
Translates to: STVSDPVSSSGREALFPWQSLIQ*ALLEEK
Trigger: CTTCTCTTCCAGAAGAGCTCACTGGATCAGAGACTG...CCAGGGGAAGAGAGCTTCTCTTCCAGAAGAGCTCACTGGATCAGAGACTGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251089.8
ENST00000557179.5
CDS-3UTR TCA 90 bp AGAGAACGCAGCCAGGCCTGGAGAAAGTCTAACCGTGGGAAAAAGGGAACGAGGTTTTTCCACAGTCTCTaGTCCAGTGAGCTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: RERSQAWRKSNRGKKGTRFFHSL*SSELFW
Trigger: CCAGAAGAGCTCACTGGATCAGAGACTGTGGAAAAA...CCTCGTTCCCTTTTTCCCACGGTTAGACTTTCTCCAGGCCTGGCTGCGTTCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000251089.8
ENST00000557179.5
CDS-3UTR TCA 90 bp AAGCCCTGTTCCTCCCAGGCCTCACAGCAGTGGGAATTTACCTCAGCTAATAGACACAGGGCACTGTCTTaGGACCCTTTTAGGCAGTGT +
Preference number: 4 (lower is better)
Translates to: KPCSSQASQQWEFTSANRHRALS*DPFRQC
Trigger: ACACTGCCTAAAAGGGTCTCAAGACAGTGCCCTGTG...TCTATTAGCTGAGGTAAATTCCCACTGCTGTGAGGCCTGGGAGGAACAGGGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR GCA 90 bp GTGACACAGTGTGGACTAAGGAGTCCCCTGAATAAGCCAGGGTACCCTTCTGTTATATGGTATTTCCACTaGGGGAGGCTGCAACTGCCC +
Preference number: 4 (lower is better)
Translates to: VTQCGLRSPLNKPGYPSVIWYFH*GRLQLP
Trigger: GGGCAGTTGCAGCCTCCCGCAGTGGAAATACCATAT...AACAGAAGGGTACCCTGGCTTATTCAGGGGACTCCTTAGTCCACACTGTGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR GCA 90 bp TCCACAGTCTCTGATCCAGTGAGCTCTTCTGGAAGAGAAGCTCTCTTCCCCTGGAGTCTCGGCCATACTTaGGTCTCTCTGATCTCTTGG +
Preference number: 4 (lower is better)
Translates to: STVSDPVSSSGREALFPWSLGHT*VSLISW
Trigger: CCAAGAGATCAGAGAGACGCAAGTATGGCCGAGACT...CCAGGGGAAGAGAGCTTCTCTTCCAGAAGAGCTCACTGGATCAGAGACTGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251089.8
ENST00000557179.5
CDS-3UTR GCA 90 bp TGCCACCCGCATCATGTCTCATGCAGCTGCCATAGCTTTAATCAGGAAAACACAGATGGGGCCATGCCCTaGTGCTGCCTGCTCATACAT +
Preference number: 4 (lower is better)
Translates to: CHPHHVSCSCHSFNQENTDGAMP*CCLLIH
Trigger: ATGTATGAGCAGGCAGCAGCAGGGCATGGCCCCATC...TGTGTTTTCCTGATTAAAGCTATGGCAGCTGCATGAGACATGATGCGGGTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR GCA 90 bp ACCACAGGCAGAGAACGCAGCCAGGCCTGGAGAAAGTCTAACCGTGGGAAAAAGAATCTATCAAGCATCTaGCCTCTGCTGTGGTTAGCC +
Preference number: 4 (lower is better)
Translates to: TTGRERSQAWRKSNRGKKNLSSI*PLLWLA
Trigger: GGCTAACCACAGCAGAGGGCAGATGCTTGATAGATT...CTTTTTCCCACGGTTAGACTTTCTCCAGGCCTGGCTGCGTTCTCTGCCTGTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR GCA 90 bp AATCAGGAAAACACACATCTTATCCCACTTTGCACAGACCCTCCTGAAGTGCAGCGACAGATGGCCCACTaGTCAGCCCTGGCTCCAGAA +
Preference number: 4 (lower is better)
Translates to: NQENTHLIPLCTDPPEVQRQMAH*SALAPE
Trigger: TTCTGGAGCCAGGGCTGAGCAGTGGGCCATCTGTCG...CTGCACTTCAGGAGGGTCTGTGCAAAGTGGGATAAGATGTGTGTTTTCCTGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR CCA 90 bp AAGCCCTGTTCCTCCCAGGCCTCACAGCAGTGGGAATTTACCTCAGCTAATAGAAAGGACCAGTCCTACTaGTCGCTGACAAGCGATGCT +
Preference number: 4 (lower is better)
Translates to: KPCSSQASQQWEFTSANRKDQSY*SLTSDA
Trigger: AGCATCGCTTGTCAGCGACCAGTAGGACTGGTCCTT...TCTATTAGCTGAGGTAAATTCCCACTGCTGTGAGGCCTGGGAGGAACAGGGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR CCA 90 bp TCCACAGTCTCTGATCCAGTGAGCTCTTCTGGAAGAGAAGCTCTCTTCCCCTGGTATACTGACGTCAGGTaGAGGCAGTGCTGGATGGTA +
Preference number: 4 (lower is better)
Translates to: STVSDPVSSSGREALFPWYTDVR*RQCWMV
Trigger: TACCATCCAGCACTGCCTCCACCTGACGTCAGTATA...CCAGGGGAAGAGAGCTTCTCTTCCAGAAGAGCTCACTGGATCAGAGACTGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251089.8
ENST00000557179.5
CDS-3UTR CCA 90 bp CAGGTGACACAGTGTGGACTAAGGAGTCCCCTGAATAAGCCAGGGTACCCTTCTTCCAGTGAGCTCTTCTaGAAGAGAAGCTCTCTTCCC +
Preference number: 4 (lower is better)
Translates to: QVTQCGLRSPLNKPGYPSSSELF*KRSSLP
Trigger: GGGAAGAGAGCTTCTCTTCCAGAAGAGCTCACTGGA...AGAAGGGTACCCTGGCTTATTCAGGGGACTCCTTAGTCCACACTGTGTCACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR CCA 90 bp CAGGTGACACAGTGTGGACTAAGGAGTCCCCTGAATAAGCCAGGGTACCCTTCTTCTGCTGAGGCAGTTTaGCCTGAGCTAAATACCAGG +
Preference number: 4 (lower is better)
Translates to: QVTQCGLRSPLNKPGYPSSAEAV*PELNTR
Trigger: CCTGGTATTTAGCTCAGGCCAAACTGCCTCAGCAGA...AGAAGGGTACCCTGGCTTATTCAGGGGACTCCTTAGTCCACACTGTGTCACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR CCA 90 bp CCTGTTCCTCCCAGGCCTCACAGCAGTGGGAATTTACCTCAGCTAATAGAGGGATCTTCAGTCCCACTTTaGAGGTCGAGTGAGGCAAGA +
Preference number: 4 (lower is better)
Translates to: PVPPRPHSSGNLPQLIEGSSVPL*RSSEAR
Trigger: TCTTGCCTCACTCGACCTCCAAAGTGGGACTGAAGA...TCCCTCTATTAGCTGAGGTAAATTCCCACTGCTGTGAGGCCTGGGAGGAACAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR CCA 90 bp ACCACAGGCAGAGAACGCAGCCAGGCCTGGAGAAAGTCTAACCGTGGGAAAAAGAAGAACCTTAACCCCTaGCTTACTGTCCCGAACTCA +
Preference number: 4 (lower is better)
Translates to: TTGRERSQAWRKSNRGKKKNLNP*LTVPNS
Trigger: TGAGTTCGGGACAGTAAGCCAGGGGTTAAGGTTCTT...CTTTTTCCCACGGTTAGACTTTCTCCAGGCCTGGCTGCGTTCTCTGCCTGTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR CCA 90 bp GTGACACAGTGTGGACTAAGGAGTCCCCTGAATAAGCCAGGGTACCCTTCTGTTGTGGGCATGTGGGCTTaGCTGGTCTTACTACATAGG +
Preference number: 4 (lower is better)
Translates to: VTQCGLRSPLNKPGYPSVVGMWA*LVLLHR
Trigger: CCTATGTAGTAAGACCAGCCAAGCCCACATGCCCAC...AACAGAAGGGTACCCTGGCTTATTCAGGGGACTCCTTAGTCCACACTGTGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR CCA 90 bp GTGACACAGTGTGGACTAAGGAGTCCCCTGAATAAGCCAGGGTACCCTTCTGTTTCATGTTGGTCAGGCTaGTCTGGAACTCTCGACCTC +
Preference number: 4 (lower is better)
Translates to: VTQCGLRSPLNKPGYPSVSCWSG*SGTLDL
Trigger: GAGGTCGAGAGTTCCAGACCAGCCTGACCAACATGA...AACAGAAGGGTACCCTGGCTTATTCAGGGGACTCCTTAGTCCACACTGTGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR TCA 90 bp AGAGAACGCAGCCAGGCCTGGAGAAAGTCTAACCGTGGGAAAAAGGGAACGAGGTATAAGACATCAGAGTaGACTGGAACTGAGGGCCAT +
Preference number: 4 (lower is better)
Translates to: RERSQAWRKSNRGKKGTRYKTSE*TGTEGH
Trigger: ATGGCCCTCAGTTCCAGTTCACTCTGATGTCTTATA...CCTCGTTCCCTTTTTCCCACGGTTAGACTTTCTCCAGGCCTGGCTGCGTTCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR TCA 90 bp TCCACAGTCTCTGATCCAGTGAGCTCTTCTGGAAGAGAAGCTCTCTTCCCCTGGACTTTGGAGGTCGAGTaGGGCAAGAGCAAGTCAAAT +
Preference number: 4 (lower is better)
Translates to: STVSDPVSSSGREALFPWTLEVE*GKSKSN
Trigger: ATTTGACTTGCTCTTGCCTCACTCGACCTCCAAAGT...CCAGGGGAAGAGAGCTTCTCTTCCAGAAGAGCTCACTGGATCAGAGACTGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR TCA 90 bp CTGAATAAGCCAGGGTACCCTTCTGTTAGGGGAGGGAAAGCAGACGCAACAAGCAACAGACAGACAGAATaGATGGTGGGGTGTAGACAG +
Preference number: 4 (lower is better)
Translates to: LNKPGYPSVRGGKADATSNRQTE*MVGCRQ
Trigger: CTGTCTACACCCCACCATTCATTCTGTCTGTCTGTT...GCTTGTTGCGTCTGCTTTCCCTCCCCTAACAGAAGGGTACCCTGGCTTATTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR TCA 90 bp CCTGTTCCTCCCAGGCCTCACAGCAGTGGGAATTTACCTCAGCTAATAGAGGGATCTAGATTCATGTCTTaGGACCCCACCCCAAGATCA +
Preference number: 4 (lower is better)
Translates to: PVPPRPHSSGNLPQLIEGSRFMS*DPTPRS
Trigger: TGATCTTGGGGTGGGGTCTCAAGACATGAATCTAGA...TCCCTCTATTAGCTGAGGTAAATTCCCACTGCTGTGAGGCCTGGGAGGAACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR GCA 90 bp GGCAGGGAAAAGGTCAGGTCAGAAGGTACATCAAGAAACGGCCTGAAAGCAAATCTCATCCAGGTTCTCTaGAGCCCGAAGGTCACTCAG +
Preference number: 4 (lower is better)
Translates to: GREKVRSEGTSRNGLKANLIQVL*SPKVTQ
Trigger: CTGAGTGACCTTCGGGCTGCAGAGAACCTGGATGAG...ATTTGCTTTCAGGCCGTTTCTTGATGTACCTTCTGACCTGACCTTTTCCCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR GCA 90 bp AAAACACACATCTTATCCCACTTTGCACAGACCCTCCTGAAGTGCAGAAGATACCTGAGGGCCATCTCCTaGCTTCAGGCCCTGAGCATC +
Preference number: 4 (lower is better)
Translates to: KTHILSHFAQTLLKCRRYLRAIS*LQALSI
Trigger: GATGCTCAGGGCCTGAAGGCAGGAGATGGCCCTCAG...GTATCTTCTGCACTTCAGGAGGGTCTGTGCAAAGTGGGATAAGATGTGTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR GCA 90 bp GAAGGGAGGGGATGTAAGTTTCTTGGATCTAAGTTTCTAGATGCATGGGATTTTCCCAGACGCCGGGCCTaGCCTGGTTGGCAGGATGAA +
Preference number: 4 (lower is better)
Translates to: EGRGCKFLGSKFLDAWDFPRRRA*PGWQDE
Trigger: TTCATCCTGCCAACCAGGGCAGGCCCGGCGTCTGGG...AAAATCCCATGCATCTAGAAACTTAGATCCAAGAAACTTACATCCCCTCCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR GCA 90 bp ATTTTTCCAGCGACAGATGGCCCACTGCTCAGCCCTGGCTCCAGAATGCAAAAGCATCTTATCCCACTTTaGACAGACCCTCCTGAAGTG +
Preference number: 4 (lower is better)
Translates to: IFPATDGPLLSPGSRMQKHLIPL*TDPPEV
Trigger: CACTTCAGGAGGGTCTGTGCAAAGTGGGATAAGATG...CTTTTGCATTCTGGAGCCAGGGCTGAGCAGTGGGCCATCTGTCGCTGGAAAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR CCA 90 bp CGCAAGTACTGCCACTTCAAATTCTTGGACCAGTTTTGTCCAAGGCCACCTTTCCGCTGGGGCAGGAAGTaGGTATATACTGACGTCAGG +
Preference number: 4 (lower is better)
Translates to: RKYCHFKFLDQFCPRPPFRWGRK*VYTDVR
Trigger: CCTGACGTCAGTATATACCCACTTCCTGCCCCAGCG...GAAAGGTGGCCTTGGACAAAACTGGTCCAAGAATTTGAAGTGGCAGTACTTGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR CCA 90 bp TACCTACAGTCACCAGCTGAACAGGCCAAGAGGACAAATGATGTTTCTAATTCCTCCCTCAGGGAAGCCTaGGGAAAGGGATGGCCCTTG +
Preference number: 4 (lower is better)
Translates to: YLQSPAEQAKRTNDVSNSSLREA*GKGWPL
Trigger: CAAGGGCCATCCCTTTCCCCAGGCTTCCCTGAGGGA...GGAATTAGAAACATCATTTGTCCTCTTGGCCTGTTCAGCTGGTGACTGTAGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR CCA 90 bp TCCACAGTCTCTGATCCAGTGAGCTCTTCTGGAAGAGAAGCTCTCTTCCCCTGGACCCAGGTAGTGCAATaGAAGCAACCAAGTGGCTTT +
Preference number: 4 (lower is better)
Translates to: STVSDPVSSSGREALFPWTQVVQ*KQPSGF
Trigger: AAAGCCACTTGGTTGCTTCCATTGCACTACCTGGGT...CCAGGGGAAGAGAGCTTCTCTTCCAGAAGAGCTCACTGGATCAGAGACTGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR TCA 90 bp CCTGTTCCTCCCAGGCCTCACAGCAGTGGGAATTTACCTCAGCTAATAGAGGGAAGCGATAGTTCCAATTaGGGATGTCTGGATGGCAAT +
Preference number: 4 (lower is better)
Translates to: PVPPRPHSSGNLPQLIEGSDSSN*GCLDGN
Trigger: ATTGCCATCCAGACATCCTCAATTGGAACTATCGCT...TCCCTCTATTAGCTGAGGTAAATTCCCACTGCTGTGAGGCCTGGGAGGAACAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR TCA 90 bp GAGGAGGGGGAAGGGAGGGGATGTAAGTTTCTTGGATCTAAGTTTCTAGATGCACAGGAGGTGACATACTaGCAGCAATCAGTGATGCCC +
Preference number: 4 (lower is better)
Translates to: EEGEGRGCKFLGSKFLDAQEVTY*QQSVMP
Trigger: GGGCATCACTGATTGCTGTCAGTATGTCACCTCCTG...TGCATCTAGAAACTTAGATCCAAGAAACTTACATCCCCTCCCTTCCCCCTCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251089.8
ENST00000557179.5
CDS-3UTR TCA 90 bp CGCAAGTACTGCCACTTCAAATTCTTGGACCAGTTTTGTCCAAGGCCACCTTTCGAAGTGGGTATATACTaGCGTCAGGTGGAGGCAGTG +
Preference number: 4 (lower is better)
Translates to: RKYCHFKFLDQFCPRPPFEVGIY*RQVEAV
Trigger: CACTGCCTCCACCTGACGTCAGTATATACCCACTTC...GAAAGGTGGCCTTGGACAAAACTGGTCCAAGAATTTGAAGTGGCAGTACTTGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR TCA 90 bp GCAGCTGAGGCCTTGCTGGACAGAGCCAATCCGCAAGTACTGCCACTTCAAATTCTCACAGGACTCAGCTaGGAAGAAGATGTAATCTAC +
Preference number: 4 (lower is better)
Translates to: AAEALLDRANPQVLPLQILTGLS*EEDVIY
Trigger: GTAGATTACATCTTCTTCTCAGCTGAGTCCTGTGAG...AATTTGAAGTGGCAGTACTTGCGGATTGGCTCTGTCCAGCAAGGCCTCAGCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR TCA 90 bp CGCAAGTACTGCCACTTCAAATTCTTGGACCAGTTTTGTCCAAGGCCACCTTTCGACGACCCAGGAGCTTaGGAGTTCCATCTCGATACA +
Preference number: 4 (lower is better)
Translates to: RKYCHFKFLDQFCPRPPFDDPGA*EFHLDT
Trigger: TGTATCGAGATGGAACTCTCAAGCTCCTGGGTCGTC...GAAAGGTGGCCTTGGACAAAACTGGTCCAAGAATTTGAAGTGGCAGTACTTGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR TCA 90 bp GAGGAGGGGGAAGGGAGGGGATGTAAGTTTCTTGGATCTAAGTTTCTAGATGCAAGCAGAAGAGAACAGTaGTGGGCCCTAGTCCTAGGA +
Preference number: 4 (lower is better)
Translates to: EEGEGRGCKFLGSKFLDASRREQ*WALVLG
Trigger: TCCTAGGACTAGGGCCCATCACTGTTCTCTTCTGCT...TGCATCTAGAAACTTAGATCCAAGAAACTTACATCCCCTCCCTTCCCCCTCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR TCA 90 bp ACCACAGGCAGAGAACGCAGCCAGGCCTGGAGAAAGTCTAACCGTGGGAAAAAGTTTCACTGGCAACACTaGAATGTCCATGAAACAGGA +
Preference number: 4 (lower is better)
Translates to: TTGRERSQAWRKSNRGKKFHWQH*NVHETG
Trigger: TCCTGTTTCATGGACATTTCAGTGTTGCCAGTGAAA...CTTTTTCCCACGGTTAGACTTTCTCCAGGCCTGGCTGCGTTCTCTGCCTGTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557179.5
CDS-3UTR GCA 90 bp AAAACACACATCTTATCCCACTTTGCACAGACCCTCCTGAAGTGCAGAAGATACTCTTCTCGCCACTGCTaGAGCAGGCCCTCACATTCC +
Preference number: 4 (lower is better)
Translates to: KTHILSHFAQTLLKCRRYSSRHC*SRPSHS
Trigger: GGAATGTGAGGGCCTGCTGCAGCAGTGGCGAGAAGA...GTATCTTCTGCACTTCAGGAGGGTCTGTGCAAAGTGGGATAAGATGTGTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR GCA 90 bp ATAAATTCCCTAGAACCTAGGCATGGAAAGCTTCTAACCATGAATGCAGCAGCACGAAGGTCACTCAGCTaGCTGCTGGACCACCTGTCC +
Preference number: 4 (lower is better)
Translates to: INSLEPRHGKLLTMNAAARRSLS*LLDHLS
Trigger: GGACAGGTGGTCCAGCAGGCAGCTGAGTGACCTTCG...TGCTGCTGCATTCATGGTTAGAAGCTTTCCATGCCTAGGTTCTAGGGAATTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR GCA 90 bp CGCAAGTACTGCCACTTCAAATTCTTGGACCAGTTTTGTCCAAGGCCACCTTTCAAGGATATGGGTATTTaGCACACACAGCGGGGCCAC +
Preference number: 4 (lower is better)
Translates to: RKYCHFKFLDQFCPRPPFKDMGI*HTQRGH
Trigger: GTGGCCCCGCTGTGTGTGGCAAATACCCATATCCTT...GAAAGGTGGCCTTGGACAAAACTGGTCCAAGAATTTGAAGTGGCAGTACTTGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR GCA 90 bp AATCAGGAAAACACACATCTTATCCCACTTTGCACAGACCCTCCTGAAGTGCAGGCCATGCCCTGCTGCTaGCTGCTCATACATAGGTAC +
Preference number: 4 (lower is better)
Translates to: NQENTHLIPLCTDPPEVQAMPCC*LLIHRY
Trigger: GTACCTATGTATGAGCAGGCAGCAGCAGGGCATGGC...CTGCACTTCAGGAGGGTCTGTGCAAAGTGGGATAAGATGTGTGTTTTCCTGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR GCA 90 bp TACCTACAGTCACCAGCTGAACAGGCCAAGAGGACAAATGATGTTTCTAATTCCTGGAACTCCTACCCTTaGCCCAGTTCTGCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: YLQSPAEQAKRTNDVSNSWNSYP*PSSAGC
Trigger: GCAGCCTGCAGAACTGGGGCAAGGGTAGGAGTTCCA...GGAATTAGAAACATCATTTGTCCTCTTGGCCTGTTCAGCTGGTGACTGTAGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR GCA 90 bp CAGGTGACACAGTGTGGACTAAGGAGTCCCCTGAATAAGCCAGGGTACCCTTCTGAGATCAGAAATAGATaGTCAGCAAGAGGCATGTGC +
Preference number: 4 (lower is better)
Translates to: QVTQCGLRSPLNKPGYPSEIRNR*SARGMC
Trigger: GCACATGCCTCTTGCTGAGCATCTATTTCTGATCTC...AGAAGGGTACCCTGGCTTATTCAGGGGACTCCTTAGTCCACACTGTGTCACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR CCA 90 bp AAAACACACATCTTATCCCACTTTGCACAGACCCTCCTGAAGTGCAGAAGATACCCTCAAAGGGCCAGATaGAAGCCTCTTCCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: KTHILSHFAQTLLKCRRYPQRAR*KPLPGA
Trigger: TGCCCCAGGAAGAGGCTTCCATCTGGCCCTTTGAGG...GTATCTTCTGCACTTCAGGAGGGTCTGTGCAAAGTGGGATAAGATGTGTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR CCA 90 bp GAGGAGGGGGAAGGGAGGGGATGTAAGTTTCTTGGATCTAAGTTTCTAGATGCAGAGCATCTGGCTGGGTaGAGAAATCCTCCCATTCTC +
Preference number: 4 (lower is better)
Translates to: EEGEGRGCKFLGSKFLDAEHLAG*RNPPIL
Trigger: GAGAATGGGAGGATTTCTCCACCCAGCCAGATGCTC...TGCATCTAGAAACTTAGATCCAAGAAACTTACATCCCCTCCCTTCCCCCTCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR CCA 90 bp CTGAATAAGCCAGGGTACCCTTCTGTTAGGGGAGGGAAAGCAGACGCAACAAGCAAGGGAAGCGGGAGATaGGAGATAGCAGAAAGTAAA +
Preference number: 4 (lower is better)
Translates to: LNKPGYPSVRGGKADATSKGSGR*EIAESK
Trigger: TTTACTTTCTGCTATCTCCCATCTCCCGCTTCCCTT...GCTTGTTGCGTCTGCTTTCCCTCCCCTAACAGAAGGGTACCCTGGCTTATTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR CCA 90 bp ATTTTTCCAGCGACAGATGGCCCACTGCTCAGCCCTGGCTCCAGAATGCAAAAGGCCACTTCAAATTCTTaGACCAGTTTTGTCCAAGGC +
Preference number: 4 (lower is better)
Translates to: IFPATDGPLLSPGSRMQKATSNS*TSFVQG
Trigger: GCCTTGGACAAAACTGGTCCAAGAATTTGAAGTGGC...CTTTTGCATTCTGGAGCCAGGGCTGAGCAGTGGGCCATCTGTCGCTGGAAAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR CCA 90 bp AAAGTGGACTGGTCAGAGGCAGGCATGGCTGTGCAGAAGTCTCACCCCAAGAGGAATCATTCTCTCACTTaGGAAGGACAGAAGAAAGCT +
Preference number: 4 (lower is better)
Translates to: KVDWSEAGMAVQKSHPKRNHSLT*EGQKKA
Trigger: AGCTTTCTTCTGTCCTTCCCAAGTGAGAGAATGATT...CCTCTTGGGGTGAGACTTCTGCACAGCCATGCCTGCCTCTGACCAGTCCACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR CCA 90 bp GGCAGGGAAAAGGTCAGGTCAGAAGGTACATCAAGAAACGGCCTGAAAGCAAATGCCTGGTGTGGGTTCTaGGAACCTGTTCAGGTAAGA +
Preference number: 4 (lower is better)
Translates to: GREKVRSEGTSRNGLKANAWCGF*EPVQVR
Trigger: TCTTACCTGAACAGGTTCCCAGAACCCACACCAGGC...ATTTGCTTTCAGGCCGTTTCTTGATGTACCTTCTGACCTGACCTTTTCCCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR CCA 90 bp GGCAGGGAAAAGGTCAGGTCAGAAGGTACATCAAGAAACGGCCTGAAAGCAAATACTGATTCAGAGGCCTaGTGTGGGTTCTGGGAACCT +
Preference number: 4 (lower is better)
Translates to: GREKVRSEGTSRNGLKANTDSEA*CGFWEP
Trigger: AGGTTCCCAGAACCCACACCAGGCCTCTGAATCAGT...ATTTGCTTTCAGGCCGTTTCTTGATGTACCTTCTGACCTGACCTTTTCCCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR CCA 90 bp TCCACAGTCTCTGATCCAGTGAGCTCTTCTGGAAGAGAAGCTCTCTTCCCCTGGCAGGGTCAAACCAAATaGGAAAGCACCAAAGCACTT +
Preference number: 4 (lower is better)
Translates to: STVSDPVSSSGREALFPWQGQTK*ESTKAL
Trigger: AAGTGCTTTGGTGCTTTCCCATTTGGTTTGACCCTG...CCAGGGGAAGAGAGCTTCTCTTCCAGAAGAGCTCACTGGATCAGAGACTGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557179.5
CDS-3UTR TCA 90 bp TACCTACAGTCACCAGCTGAACAGGCCAAGAGGACAAATGATGTTTCTAATTCCAGAGTGAACTGGAACTaGGGGCCATCTCCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: YLQSPAEQAKRTNDVSNSRVNWN*GPSPAF
Trigger: GAAGGCAGGAGATGGCCCTCAGTTCCAGTTCACTCT...GGAATTAGAAACATCATTTGTCCTCTTGGCCTGTTCAGCTGGTGACTGTAGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR TCA 90 bp AAAACACACATCTTATCCCACTTTGCACAGACCCTCCTGAAGTGCAGAAGATACAGTCCTACTGGTCGCTaGCAAGCGATGCTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: KTHILSHFAQTLLKCRRYSPTGR*QAMLQK
Trigger: CTTCTGCAGCATCGCTTGTCAGCGACCAGTAGGACT...GTATCTTCTGCACTTCAGGAGGGTCTGTGCAAAGTGGGATAAGATGTGTGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR TCA 90 bp GGCAGGGAAAAGGTCAGGTCAGAAGGTACATCAAGAAACGGCCTGAAAGCAAATGGCTGCAGAGTCCAGTaGAACAAGAGTTTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: GREKVRSEGTSRNGLKANGCRVQ*NKSFLK
Trigger: CTTCAGGAAACTCTTGTTTCACTGGACTCTGCAGCC...ATTTGCTTTCAGGCCGTTTCTTGATGTACCTTCTGACCTGACCTTTTCCCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR TCA 90 bp AATCAGGAAAACACACATCTTATCCCACTTTGCACAGACCCTCCTGAAGTGCAGGCCACACCCCAGCAATaGAAGATTAAGGCATGCAGG +
Preference number: 4 (lower is better)
Translates to: NQENTHLIPLCTDPPEVQATPQQ*KIKACR
Trigger: CCTGCATGCCTTAATCTTTCATTGCTGGGGTGTGGC...CTGCACTTCAGGAGGGTCTGTGCAAAGTGGGATAAGATGTGTGTTTTCCTGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR TCA 90 bp GGCAGGGAAAAGGTCAGGTCAGAAGGTACATCAAGAAACGGCCTGAAAGCAAATCGAACTCAAGTCTCTTaGCCACTGTCTTCAGTCCCA +
Preference number: 4 (lower is better)
Translates to: GREKVRSEGTSRNGLKANRTQVS*PLSSVP
Trigger: TGGGACTGAAGACAGTGGTCAAGAGACTTGAGTTCG...ATTTGCTTTCAGGCCGTTTCTTGATGTACCTTCTGACCTGACCTTTTCCCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR GCA 90 bp GAGGAGGGGGAAGGGAGGGGATGTAAGTTTCTTGGATCTAAGTTTCTAGATGCAAGTCTCGGCCATACTTaGGTCTCTCTGATCTCTTGG +
Preference number: 4 (lower is better)
Translates to: EEGEGRGCKFLGSKFLDASLGHT*VSLISW
Trigger: CCAAGAGATCAGAGAGACGCAAGTATGGCCGAGACT...TGCATCTAGAAACTTAGATCCAAGAAACTTACATCCCCTCCCTTCCCCCTCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251089.8
ENST00000557179.5
CDS-3UTR GCA 90 bp AAAACACACATCTTATCCCACTTTGCACAGACCCTCCTGAAGTGCAGAAGATACAGGCAGGCATGGCTGTaGAGAAGTCTCACCCCAAGA +
Preference number: 4 (lower is better)
Translates to: KTHILSHFAQTLLKCRRYRQAWL*RSLTPR
Trigger: TCTTGGGGTGAGACTTCTGCACAGCCATGCCTGCCT...GTATCTTCTGCACTTCAGGAGGGTCTGTGCAAAGTGGGATAAGATGTGTGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR GCA 90 bp CAGGTGACACAGTGTGGACTAAGGAGTCCCCTGAATAAGCCAGGGTACCCTTCTCATGTCTCATGCAGCTaGCATAGCTTTAATCAGGAA +
Preference number: 4 (lower is better)
Translates to: QVTQCGLRSPLNKPGYPSHVSCS*HSFNQE
Trigger: TTCCTGATTAAAGCTATGGCAGCTGCATGAGACATG...AGAAGGGTACCCTGGCTTATTCAGGGGACTCCTTAGTCCACACTGTGTCACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR CCA 90 bp ATAAATTCCCTAGAACCTAGGCATGGAAAGCTTCTAACCATGAATGCAGCAGCACACTCAGCTGCCTGCTaGACCACCTGTCCTCTGAAG +
Preference number: 4 (lower is better)
Translates to: INSLEPRHGKLLTMNAAAHSAAC*TTCPLK
Trigger: CTTCAGAGGACAGGTGGTCCAGCAGGCAGCTGAGTG...TGCTGCTGCATTCATGGTTAGAAGCTTTCCATGCCTAGGTTCTAGGGAATTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR CCA 90 bp AAAACACACATCTTATCCCACTTTGCACAGACCCTCCTGAAGTGCAGAAGATACTGCCATCTGACAGTCTaGCCACCTTGTCCACTTCCG +
Preference number: 4 (lower is better)
Translates to: KTHILSHFAQTLLKCRRYCHLTV*PPCPLP
Trigger: CGGAAGTGGACAAGGTGGCCAGACTGTCAGATGGCA...GTATCTTCTGCACTTCAGGAGGGTCTGTGCAAAGTGGGATAAGATGTGTGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR CCA 90 bp AAAACACACATCTTATCCCACTTTGCACAGACCCTCCTGAAGTGCAGAAGATACGGCATCCCATGGTACTaGAGCTCTCCATCCCTGATG +
Preference number: 4 (lower is better)
Translates to: KTHILSHFAQTLLKCRRYGIPWY*SSPSLM
Trigger: CATCAGGGATGGAGAGCTCCAGTACCATGGGATGCC...GTATCTTCTGCACTTCAGGAGGGTCTGTGCAAAGTGGGATAAGATGTGTGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR CCA 90 bp GGATGTAAGTTTCTTGGATCTAAGTTTCTAGATGCATGGGATTTTTCCACAGTCCATTGTAGTGACCTCTaGGCGGCCACGCTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: GCKFLGSKFLDAWDFSTVHCSDL*AATLGQ
Trigger: CTGCCCCAGCGTGGCCGCCCAGAGGTCACTACAATG...GACTGTGGAAAAATCCCATGCATCTAGAAACTTAGATCCAAGAAACTTACATCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251089.8
ENST00000557179.5
CDS-3UTR CCA 90 bp GGATGTAAGTTTCTTGGATCTAAGTTTCTAGATGCATGGGATTTTTCCACAGTCCTGGGAGCCCTGTCATaGGGCGGTGACTTCCATCCC +
Preference number: 4 (lower is better)
Translates to: GCKFLGSKFLDAWDFSTVLGALS*GGDFHP
Trigger: GGGATGGAAGTCACCGCCCCATGACAGGGCTCCCAG...GACTGTGGAAAAATCCCATGCATCTAGAAACTTAGATCCAAGAAACTTACATCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251089.8
ENST00000557179.5
CDS-3UTR CCA 90 bp AATCAGGAAAACACACATCTTATCCCACTTTGCACAGACCCTCCTGAAGTGCAGCCCCAACATGAAAAGTaGACTGGTCAGAGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: NQENTHLIPLCTDPPEVQPQHEK*TGQRQA
Trigger: TGCCTGCCTCTGACCAGTCCACTTTTCATGTTGGGG...CTGCACTTCAGGAGGGTCTGTGCAAAGTGGGATAAGATGTGTGTTTTCCTGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR CCA 90 bp GAGGAGGGGGAAGGGAGGGGATGTAAGTTTCTTGGATCTAAGTTTCTAGATGCAAGACAGAATGAATGGTaGGGTGTAGACAGACCTGGG +
Preference number: 4 (lower is better)
Translates to: EEGEGRGCKFLGSKFLDARQNEW*GVDRPG
Trigger: CCCAGGTCTGTCTACACCCCACCATTCATTCTGTCT...TGCATCTAGAAACTTAGATCCAAGAAACTTACATCCCCTCCCTTCCCCCTCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR CCA 90 bp GAGGAGGGGGAAGGGAGGGGATGTAAGTTTCTTGGATCTAAGTTTCTAGATGCAACAGAAAACCAGATCTaGTTTCAGGGCTCCCAGTGG +
Preference number: 4 (lower is better)
Translates to: EEGEGRGCKFLGSKFLDATENQI*FQGSQW
Trigger: CCACTGGGAGCCCTGAAACCAGATCTGGTTTTCTGT...TGCATCTAGAAACTTAGATCCAAGAAACTTACATCCCCTCCCTTCCCCCTCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR CCA 90 bp AGAGAACGCAGCCAGGCCTGGAGAAAGTCTAACCGTGGGAAAAAGGGAACGAGGGTTTATCCTCATCTTTaGATCTTCTGGATCAAGGTC +
Preference number: 4 (lower is better)
Translates to: RERSQAWRKSNRGKKGTRVYPHL*IFWIKV
Trigger: GACCTTGATCCAGAAGATCCAAAGATGAGGATAAAC...CCTCGTTCCCTTTTTCCCACGGTTAGACTTTCTCCAGGCCTGGCTGCGTTCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557179.5
CDS-3UTR TCA 90 bp TACCTACAGTCACCAGCTGAACAGGCCAAGAGGACAAATGATGTTTCTAATTCCTGGGGTGACAGGAGGTaGCATACTGACAGCAATCAG +
Preference number: 4 (lower is better)
Translates to: YLQSPAEQAKRTNDVSNSWGDRR*HTDSNQ
Trigger: CTGATTGCTGTCAGTATGTCACCTCCTGTCACCCCA...GGAATTAGAAACATCATTTGTCCTCTTGGCCTGTTCAGCTGGTGACTGTAGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR TCA 90 bp AAGTTTCTTGGATCTAAGTTTCTAGATGCATGGGATTTTTCCACAGTCTCTGATCCTGTCATGGGGCGGTaGCTTCCATCCCGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: KFLGSKFLDAWDFSTVSDPVMGR*LPSRSW
Trigger: CCAGCTTCGGGATGGAAGTCACCGCCCCATGACAGG...ATCAGAGACTGTGGAAAAATCCCATGCATCTAGAAACTTAGATCCAAGAAACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251089.8
ENST00000557179.5
CDS-3UTR GCA 90 bp AAAACACACATCTTATCCCACTTTGCACAGACCCTCCTGAAGTGCAGAAGATACTATCTCACATATGCATaGCTGGCAAGAGGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: KTHILSHFAQTLLKCRRYYLTYA*LARGLG
Trigger: GCCCAGCCCTCTTGCCAGGCATGCATATGTGAGATA...GTATCTTCTGCACTTCAGGAGGGTCTGTGCAAAGTGGGATAAGATGTGTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR CCA 90 bp TGCCACCCGCATCATGTCTCATGCAGCTGCCATAGCTTTAATCAGGAAAACACAAGTGCCAGGCTGCTCTaGGCTAGTCCTTTATCTATA +
Preference number: 4 (lower is better)
Translates to: CHPHHVSCSCHSFNQENTSARLL*ASPLSI
Trigger: TATAGATAAAGGACTAGCCCAGAGCAGCCTGGCACT...TGTGTTTTCCTGATTAAAGCTATGGCAGCTGCATGAGACATGATGCGGGTGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR CCA 90 bp TGTAAGTTTCTTGGATCTAAGTTTCTAGATGCATGGGATTTTTCCACAGTCTCTCTTCCCACTGCTCTGTaGCCAGGGCACCCACTGGGA +
Preference number: 4 (lower is better)
Translates to: CKFLGSKFLDAWDFSTVSLPTAL*PGHPLG
Trigger: TCCCAGTGGGTGCCCTGGCCACAGAGCAGTGGGAAG...AGAGACTGTGGAAAAATCCCATGCATCTAGAAACTTAGATCCAAGAAACTTACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR CCA 90 bp TGTAAGTTTCTTGGATCTAAGTTTCTAGATGCATGGGATTTTTCCACAGTCTCTCCAGGCCAACACCGCTaGGTCCTCTTCCCACTGCTC +
Preference number: 4 (lower is better)
Translates to: CKFLGSKFLDAWDFSTVSPGQHR*VLFPLL
Trigger: GAGCAGTGGGAAGAGGACCCAGCGGTGTTGGCCTGG...AGAGACTGTGGAAAAATCCCATGCATCTAGAAACTTAGATCCAAGAAACTTACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR CCA 90 bp GAAGGGAGGGGATGTAAGTTTCTTGGATCTAAGTTTCTAGATGCATGGGATTTTATGGAAGCCTCTTCCTaGGGCACAGGCTCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: EGRGCKFLGSKFLDAWDFMEASS*GTGSGA
Trigger: AGCACCTGAGCCTGTGCCCCAGGAAGAGGCTTCCAT...AAAATCCCATGCATCTAGAAACTTAGATCCAAGAAACTTACATCCCCTCCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR CCA 90 bp GAAGGGAGGGGATGTAAGTTTCTTGGATCTAAGTTTCTAGATGCATGGGATTTTCTTCCATCCCGAAGCTaGCTAGCAGGCAGAGGTGGT +
Preference number: 4 (lower is better)
Translates to: EGRGCKFLGSKFLDAWDFLPSRS*LAGRGG
Trigger: ACCACCTCTGCCTGCTAGCCAGCTTCGGGATGGAAG...AAAATCCCATGCATCTAGAAACTTAGATCCAAGAAACTTACATCCCCTCCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251089.8
ENST00000557179.5
CDS-3UTR CCA 90 bp CTGAATAAGCCAGGGTACCCTTCTGTTAGGGGAGGGAAAGCAGACGCAACAAGCCAGCACAATGCAAACTaGGTCTTTGGCTTTCAAAAA +
Preference number: 4 (lower is better)
Translates to: LNKPGYPSVRGGKADATSQHNAN*VFGFQK
Trigger: TTTTTGAAAGCCAAAGACCCAGTTTGCATTGTGCTG...GCTTGTTGCGTCTGCTTTCCCTCCCCTAACAGAAGGGTACCCTGGCTTATTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR CCA 90 bp GAAGGGAGGGGATGTAAGTTTCTTGGATCTAAGTTTCTAGATGCATGGGATTTTGGGTGTAGACAGACCTaGGGCTCAGACAGGCACATG +
Preference number: 4 (lower is better)
Translates to: EGRGCKFLGSKFLDAWDFGCRQT*GSDRHM
Trigger: CATGTGCCTGTCTGAGCCCCAGGTCTGTCTACACCC...AAAATCCCATGCATCTAGAAACTTAGATCCAAGAAACTTACATCCCCTCCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR TCA 90 bp TACCTACAGTCACCAGCTGAACAGGCCAAGAGGACAAATGATGTTTCTAATTCCCCCTGGTTGGCAGGATaGATGCCTAATGAAACACAG +
Preference number: 4 (lower is better)
Translates to: YLQSPAEQAKRTNDVSNSPWLAG*MPNETQ
Trigger: CTGTGTTTCATTAGGCATTCATCCTGCCAACCAGGG...GGAATTAGAAACATCATTTGTCCTCTTGGCCTGTTCAGCTGGTGACTGTAGGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR TCA 90 bp TACCTACAGTCACCAGCTGAACAGGCCAAGAGGACAAATGATGTTTCTAATTCCTTGCACAGACCCTCCTaGAGTGCAGAAGATACTAGG +
Preference number: 4 (lower is better)
Translates to: YLQSPAEQAKRTNDVSNSLHRPS*SAEDTR
Trigger: CCTAGTATCTTCTGCACTTCAGGAGGGTCTGTGCAA...GGAATTAGAAACATCATTTGTCCTCTTGGCCTGTTCAGCTGGTGACTGTAGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR GCA 90 bp TACCTACAGTCACCAGCTGAACAGGCCAAGAGGACAAATGATGTTTCTAATTCCTCAGAAGTGCCAGGCTaGTCTGGGCTAGTCCTTTAT +
Preference number: 4 (lower is better)
Translates to: YLQSPAEQAKRTNDVSNSSEVPG*SGLVLY
Trigger: ATAAAGGACTAGCCCAGAGCAGCCTGGCACTTCTGA...GGAATTAGAAACATCATTTGTCCTCTTGGCCTGTTCAGCTGGTGACTGTAGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR GCA 90 bp CGCAAGTACTGCCACTTCAAATTCTTGGACCAGTTTTGTCCAAGGCCACCTTTCAATGCAGCAGCACAATaGAAACTGGGTCTTTGGCTT +
Preference number: 4 (lower is better)
Translates to: RKYCHFKFLDQFCPRPPFNAAAQ*KLGLWL
Trigger: AAGCCAAAGACCCAGTTTGCATTGTGCTGCTGCATT...GAAAGGTGGCCTTGGACAAAACTGGTCCAAGAATTTGAAGTGGCAGTACTTGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR GCA 90 bp GGCAGGGAAAAGGTCAGGTCAGAAGGTACATCAAGAAACGGCCTGAAAGCAAATCCGCATCATGTCTCATaGAGCTGCCATAGCTTTAAT +
Preference number: 4 (lower is better)
Translates to: GREKVRSEGTSRNGLKANPHHVS*SCHSFN
Trigger: ATTAAAGCTATGGCAGCTGCATGAGACATGATGCGG...ATTTGCTTTCAGGCCGTTTCTTGATGTACCTTCTGACCTGACCTTTTCCCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR CCA 90 bp CCTGTTCCTCCCAGGCCTCACAGCAGTGGGAATTTACCTCAGCTAATAGAGGGAAAGTTTCTAGATGCATaGGATTTTTCCACAGTCTCT +
Preference number: 4 (lower is better)
Translates to: PVPPRPHSSGNLPQLIEGKFLDA*DFSTVS
Trigger: AGAGACTGTGGAAAAATCCCATGCATCTAGAAACTT...TCCCTCTATTAGCTGAGGTAAATTCCCACTGCTGTGAGGCCTGGGAGGAACAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR CCA 90 bp GAAGGGAGGGGATGTAAGTTTCTTGGATCTAAGTTTCTAGATGCATGGGATTTTCAGGCTGGAGTGCAATaGCATGATCTCGGCTCACCA +
Preference number: 4 (lower is better)
Translates to: EGRGCKFLGSKFLDAWDFQAGVQ*HDLGSP
Trigger: TGGTGAGCCGAGATCATGCCATTGCACTCCAGCCTG...AAAATCCCATGCATCTAGAAACTTAGATCCAAGAAACTTACATCCCCTCCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR TCA 90 bp TGCCACCCGCATCATGTCTCATGCAGCTGCCATAGCTTTAATCAGGAAAACACACGCCACAAAATTTCATaGTATGGTATTTCCACTGCG +
Preference number: 4 (lower is better)
Translates to: CHPHHVSCSCHSFNQENTRHKIS*YGISTA
Trigger: CGCAGTGGAAATACCATATCATGAAATTTTGTGGCG...TGTGTTTTCCTGATTAAAGCTATGGCAGCTGCATGAGACATGATGCGGGTGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR TCA 90 bp TGTAAGTTTCTTGGATCTAAGTTTCTAGATGCATGGGATTTTTCCACAGTCTCTCTCTCCCAGGGCCACTaGGTGTGTGGCACAGGATTA +
Preference number: 4 (lower is better)
Translates to: CKFLGSKFLDAWDFSTVSLSQGH*VCGTGL
Trigger: TAATCCTGTGCCACACACTCAGTGGCCCTGGGAGAG...AGAGACTGTGGAAAAATCCCATGCATCTAGAAACTTAGATCCAAGAAACTTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251089.8
ENST00000557179.5
CDS-3UTR GCA 90 bp TGCCACCCGCATCATGTCTCATGCAGCTGCCATAGCTTTAATCAGGAAAACACAAGAGGAACAGAAAATTaGTTCTTAGGAGTGGAGAGG +
Preference number: 4 (lower is better)
Translates to: CHPHHVSCSCHSFNQENTRGTEN*FLGVER
Trigger: CCTCTCCACTCCTAAGAAGCAATTTTCTGTTCCTCT...TGTGTTTTCCTGATTAAAGCTATGGCAGCTGCATGAGACATGATGCGGGTGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR GCA 90 bp GAAGGGAGGGGATGTAAGTTTCTTGGATCTAAGTTTCTAGATGCATGGGATTTTGCTCAGACAGGCACATaGCCAGTACCCAGGAAACAA +
Preference number: 4 (lower is better)
Translates to: EGRGCKFLGSKFLDAWDFAQTGT*PVPRKQ
Trigger: TTGTTTCCTGGGTACTGGGCATGTGCCTGTCTGAGC...AAAATCCCATGCATCTAGAAACTTAGATCCAAGAAACTTACATCCCCTCCCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR CCA 90 bp GAAGGGAGGGGATGTAAGTTTCTTGGATCTAAGTTTCTAGATGCATGGGATTTTTGGTACCTACAGTCCTaGAGAAGGCAGGCTCAAGCT +
Preference number: 4 (lower is better)
Translates to: EGRGCKFLGSKFLDAWDFWYLQS*RRQAQA
Trigger: AGCTTGAGCCTGCCTTCTCCAGGACTGTAGGTACCA...AAAATCCCATGCATCTAGAAACTTAGATCCAAGAAACTTACATCCCCTCCCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251089.8
ENST00000557179.5
CDS-3UTR CCA 90 bp GGATGTAAGTTTCTTGGATCTAAGTTTCTAGATGCATGGGATTTTTCCACAGTCCGCTGGGGCAGGAAGTaGGTATATACTGACGTCAGG +
Preference number: 4 (lower is better)
Translates to: GCKFLGSKFLDAWDFSTVRWGRK*VYTDVR
Trigger: CCTGACGTCAGTATATACCCACTTCCTGCCCCAGCG...GACTGTGGAAAAATCCCATGCATCTAGAAACTTAGATCCAAGAAACTTACATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251089.8
ENST00000557179.5
CDS-3UTR CCA 90 bp GGATGTAAGTTTCTTGGATCTAAGTTTCTAGATGCATGGGATTTTTCCACAGTCAAGAGCAGAAGGGGTTaGGTAAGCCATTGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: GCKFLGSKFLDAWDFSTVKSRRG*VSHWQP
Trigger: GGGCTGCCAATGGCTTACCCAACCCCTTCTGCTCTT...GACTGTGGAAAAATCCCATGCATCTAGAAACTTAGATCCAAGAAACTTACATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251089.8
ENST00000557179.5
CDS-3UTR CCA 90 bp TCCACAGTCTCTGATCCAGTGAGCTCTTCTGGAAGAGAAGCTCTCTTCCCCTGGATGTTTTGGGACATGTaGACAAATACAAACACATAC +
Preference number: 4 (lower is better)
Translates to: STVSDPVSSSGREALFPWMFWDM*TNTNTY
Trigger: GTATGTGTTTGTATTTGTCCACATGTCCCAAAACAT...CCAGGGGAAGAGAGCTTCTCTTCCAGAAGAGCTCACTGGATCAGAGACTGTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557179.5
CDS-3UTR TCA 90 bp GGATGTAAGTTTCTTGGATCTAAGTTTCTAGATGCATGGGATTTTTCCACAGTCTGGGGTGACAGGAGGTaGCATACTGACAGCAATCAG +
Preference number: 4 (lower is better)
Translates to: GCKFLGSKFLDAWDFSTVWGDRR*HTDSNQ
Trigger: CTGATTGCTGTCAGTATGTCACCTCCTGTCACCCCA...GACTGTGGAAAAATCCCATGCATCTAGAAACTTAGATCCAAGAAACTTACATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251089.8
ENST00000557179.5
CDS-3UTR TCA 90 bp GGATGTAAGTTTCTTGGATCTAAGTTTCTAGATGCATGGGATTTTTCCACAGTCGAAGTGGGTATATACTaGCGTCAGGTGGAGGCAGTG +
Preference number: 4 (lower is better)
Translates to: GCKFLGSKFLDAWDFSTVEVGIY*RQVEAV
Trigger: CACTGCCTCCACCTGACGTCAGTATATACCCACTTC...GACTGTGGAAAAATCCCATGCATCTAGAAACTTAGATCCAAGAAACTTACATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251089.8
ENST00000557179.5
CDS-3UTR TCA 90 bp GAAGGGAGGGGATGTAAGTTTCTTGGATCTAAGTTTCTAGATGCATGGGATTTTCAGTCTCTGATCCAGTaGGCTCTTCTGGAAGAGAAG +
Preference number: 4 (lower is better)
Translates to: EGRGCKFLGSKFLDAWDFQSLIQ*ALLEEK
Trigger: CTTCTCTTCCAGAAGAGCTCACTGGATCAGAGACTG...AAAATCCCATGCATCTAGAAACTTAGATCCAAGAAACTTACATCCCCTCCCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251089.8
ENST00000557179.5
CDS-3UTR GCA 90 bp GGATGTAAGTTTCTTGGATCTAAGTTTCTAGATGCATGGGATTTTTCCACAGTCTCTGGGACGAGTGGTTaGAGTAGCAACACTAAGCCC +
Preference number: 4 (lower is better)
Translates to: GCKFLGSKFLDAWDFSTVSGTSG*SSNTKP
Trigger: GGGCTTAGTGTTGCTACTGCAACCACTCGTCCCAGA...GACTGTGGAAAAATCCCATGCATCTAGAAACTTAGATCCAAGAAACTTACATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR GCA 90 bp TGTAAGTTTCTTGGATCTAAGTTTCTAGATGCATGGGATTTTTCCACAGTCTCTGTCAGGTGGAGGCAGTaGTGGATGGTACCTACAGTC +
Preference number: 4 (lower is better)
Translates to: CKFLGSKFLDAWDFSTVSVRWRQ*WMVPTV
Trigger: GACTGTAGGTACCATCCAGCACTGCCTCCACCTGAC...AGAGACTGTGGAAAAATCCCATGCATCTAGAAACTTAGATCCAAGAAACTTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251089.8
ENST00000557179.5
CDS-3UTR CCA 90 bp GAAGGGAGGGGATGTAAGTTTCTTGGATCTAAGTTTCTAGATGCATGGGATTTTTCTTCCTGGACTTCCTaGAGACACAGGATATCAGGG +
Preference number: 4 (lower is better)
Translates to: EGRGCKFLGSKFLDAWDFSSWTS*RHRISG
Trigger: CCCTGATATCCTGTGTCTCCAGGAAGTCCAGGAAGA...AAAATCCCATGCATCTAGAAACTTAGATCCAAGAAACTTACATCCCCTCCCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR CCA 90 bp GAAGGGAGGGGATGTAAGTTTCTTGGATCTAAGTTTCTAGATGCATGGGATTTTTATACTGACGTCAGGTaGAGGCAGTGCTGGATGGTA +
Preference number: 4 (lower is better)
Translates to: EGRGCKFLGSKFLDAWDFYTDVR*RQCWMV
Trigger: TACCATCCAGCACTGCCTCCACCTGACGTCAGTATA...AAAATCCCATGCATCTAGAAACTTAGATCCAAGAAACTTACATCCCCTCCCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251089.8
ENST00000557179.5
CDS-3UTR CCA 90 bp AAGTTTCTTGGATCTAAGTTTCTAGATGCATGGGATTTTTCCACAGTCTCTGATAAGAGCAGAAGGGGTTaGGTAAGCCATTGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: KFLGSKFLDAWDFSTVSDKSRRG*VSHWQP
Trigger: GGGCTGCCAATGGCTTACCCAACCCCTTCTGCTCTT...ATCAGAGACTGTGGAAAAATCCCATGCATCTAGAAACTTAGATCCAAGAAACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251089.8
ENST00000557179.5
CDS-3UTR CCA 90 bp TACCTACAGTCACCAGCTGAACAGGCCAAGAGGACAAATGATGTTTCTAATTCCTCATACATAGGTACTTaGGTAGACTCTGAACCTGCC +
Preference number: 4 (lower is better)
Translates to: YLQSPAEQAKRTNDVSNSSYIGT*VDSEPA
Trigger: GGCAGGTTCAGAGTCTACCCAAGTACCTATGTATGA...GGAATTAGAAACATCATTTGTCCTCTTGGCCTGTTCAGCTGGTGACTGTAGGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251089.8
3UTR CAA 72 bp AAGAATGAAAAGCAGTCCAAAGAATCATTCTCTCACTaGGGAAGGACAGAAGAAAGCTGTACCCCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: KNEKQSKESFSH*GRTEESCTPAV
Trigger: CACTGCTGGGGTACAGCTTTCTTCTGTCCTTCCCAAGTGAGAGAATGATTCTTTGGACTGCTTTTCATTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR TCA 90 bp GGATGTAAGTTTCTTGGATCTAAGTTTCTAGATGCATGGGATTTTTCCACAGTCGCTGGAATTCCTGCATaGGGTTCACGAAGCGATAGT +
Preference number: 4 (lower is better)
Translates to: GCKFLGSKFLDAWDFSTVAGIPA*GSRSDS
Trigger: ACTATCGCTTCGTGAACCTCATGCAGGAATTCCAGC...GACTGTGGAAAAATCCCATGCATCTAGAAACTTAGATCCAAGAAACTTACATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR TCA 90 bp AAGTTTCTTGGATCTAAGTTTCTAGATGCATGGGATTTTTCCACAGTCTCTGATCCTACAGCCCCAACATaGAAAGTGGACTGGTCAGAG +
Preference number: 4 (lower is better)
Translates to: KFLGSKFLDAWDFSTVSDPTAPT*KVDWSE
Trigger: CTCTGACCAGTCCACTTTTCATGTTGGGGCTGTAGG...ATCAGAGACTGTGGAAAAATCCCATGCATCTAGAAACTTAGATCCAAGAAACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR GCA 90 bp TGTAAGTTTCTTGGATCTAAGTTTCTAGATGCATGGGATTTTTCCACAGTCTCTGTCGCTGACAAGCGATaGTGCAGAAGCGGAAACGTA +
Preference number: 4 (lower is better)
Translates to: CKFLGSKFLDAWDFSTVSVADKR*CRSGNV
Trigger: TACGTTTCCGCTTCTGCAGCATCGCTTGTCAGCGAC...AGAGACTGTGGAAAAATCCCATGCATCTAGAAACTTAGATCCAAGAAACTTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251089.8
ENST00000557179.5
CDS-3UTR GCA 90 bp GGATGTAAGTTTCTTGGATCTAAGTTTCTAGATGCATGGGATTTTTCCACAGTCAGGCTCAAGCTCCGATaGATCTTCCTCAAGGACAGA +
Preference number: 4 (lower is better)
Translates to: GCKFLGSKFLDAWDFSTVRLKLR*IFLKDR
Trigger: TCTGTCCTTGAGGAAGATGCATCGGAGCTTGAGCCT...GACTGTGGAAAAATCCCATGCATCTAGAAACTTAGATCCAAGAAACTTACATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251089.8
ENST00000557179.5
CDS-3UTR GCA 90 bp AAGTTTCTTGGATCTAAGTTTCTAGATGCATGGGATTTTTCCACAGTCTCTGATTGCCCTGCTGCTGCCTaGTCATACATAGGTACTTGG +
Preference number: 4 (lower is better)
Translates to: KFLGSKFLDAWDFSTVSDCPAAA*SYIGTW
Trigger: CCAAGTACCTATGTATGAGCAGGCAGCAGCAGGGCA...ATCAGAGACTGTGGAAAAATCCCATGCATCTAGAAACTTAGATCCAAGAAACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR GCA 90 bp GAAGGGAGGGGATGTAAGTTTCTTGGATCTAAGTTTCTAGATGCATGGGATTTTGGTTGGCAGGATGAATaGCTAATGAAACACAGAGGC +
Preference number: 4 (lower is better)
Translates to: EGRGCKFLGSKFLDAWDFGWQDE*LMKHRG
Trigger: GCCTCTGTGTTTCATTAGGCATTCATCCTGCCAACC...AAAATCCCATGCATCTAGAAACTTAGATCCAAGAAACTTACATCCCCTCCCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR CCA 90 bp TGTAAGTTTCTTGGATCTAAGTTTCTAGATGCATGGGATTTTTCCACAGTCTCTAAGGACCAGTCCTACTaGTCGCTGACAAGCGATGCT +
Preference number: 4 (lower is better)
Translates to: CKFLGSKFLDAWDFSTVSKDQSY*SLTSDA
Trigger: AGCATCGCTTGTCAGCGACCAGTAGGACTGGTCCTT...AGAGACTGTGGAAAAATCCCATGCATCTAGAAACTTAGATCCAAGAAACTTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251089.8
ENST00000557179.5
CDS-3UTR CCA 90 bp GGATGTAAGTTTCTTGGATCTAAGTTTCTAGATGCATGGGATTTTTCCACAGTCGGTTGGGTAAGCCATTaGCAGCCCAGAGTATCTCTT +
Preference number: 4 (lower is better)
Translates to: GCKFLGSKFLDAWDFSTVGWVSH*QPRVSL
Trigger: AAGAGATACTCTGGGCTGCCAATGGCTTACCCAACC...GACTGTGGAAAAATCCCATGCATCTAGAAACTTAGATCCAAGAAACTTACATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251089.8
ENST00000557179.5
CDS-3UTR CCA 90 bp GAGGAGGGGGAAGGGAGGGGATGTAAGTTTCTTGGATCTAAGTTTCTAGATGCAAAGTTTCTAGATGCATaGGATTTTTCCACAGTCTCT +
Preference number: 4 (lower is better)
Translates to: EEGEGRGCKFLGSKFLDAKFLDA*DFSTVS
Trigger: AGAGACTGTGGAAAAATCCCATGCATCTAGAAACTT...TGCATCTAGAAACTTAGATCCAAGAAACTTACATCCCCTCCCTTCCCCCTCCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000251089.8
ENST00000557179.5
CDS-3UTR TCA 90 bp GGATGTAAGTTTCTTGGATCTAAGTTTCTAGATGCATGGGATTTTTCCACAGTCTTTTTCCACAGTCTCTaGTCCAGTGAGCTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: GCKFLGSKFLDAWDFSTVFFHSL*SSELFW
Trigger: CCAGAAGAGCTCACTGGATCAGAGACTGTGGAAAAA...GACTGTGGAAAAATCCCATGCATCTAGAAACTTAGATCCAAGAAACTTACATCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000251089.8
ENST00000557179.5
CDS-3UTR TCA 90 bp AAGTTTCTTGGATCTAAGTTTCTAGATGCATGGGATTTTTCCACAGTCTCTGATACTACCCTAGCCCAATaGACCCCACATAAGGGTTCA +
Preference number: 4 (lower is better)
Translates to: KFLGSKFLDAWDFSTVSDTTLAQ*TPHKGS
Trigger: TGAACCCTTATGTGGGGTTCATTGGGCTAGGGTAGT...ATCAGAGACTGTGGAAAAATCCCATGCATCTAGAAACTTAGATCCAAGAAACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR GCA 90 bp GAAGGGAGGGGATGTAAGTTTCTTGGATCTAAGTTTCTAGATGCATGGGATTTTCCAATCCGCAAGTACTaGCACTTCAAATTCTTGGAC +
Preference number: 4 (lower is better)
Translates to: EGRGCKFLGSKFLDAWDFPIRKY*HFKFLD
Trigger: GTCCAAGAATTTGAAGTGGCAGTACTTGCGGATTGG...AAAATCCCATGCATCTAGAAACTTAGATCCAAGAAACTTACATCCCCTCCCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR CCA 90 bp AAGTTTCTTGGATCTAAGTTTCTAGATGCATGGGATTTTTCCACAGTCTCTGATTCCTGTCCAGATACCTaGGTGGAAAAAGAAGGGTGG +
Preference number: 4 (lower is better)
Translates to: KFLGSKFLDAWDFSTVSDSCPDT*VEKEGW
Trigger: CCACCCTTCTTTTTCCACCCAGGTATCTGGACAGGA...ATCAGAGACTGTGGAAAAATCCCATGCATCTAGAAACTTAGATCCAAGAAACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000557179.5
CDS-3UTR TCA 90 bp GAAGGGAGGGGATGTAAGTTTCTTGGATCTAAGTTTCTAGATGCATGGGATTTTCAAGGTCTAATATCCTaGACCTATTACTGGGTAACC +
Preference number: 4 (lower is better)
Translates to: EGRGCKFLGSKFLDAWDFQGLIS*TYYWVT
Trigger: GGTTACCCAGTAATAGGTTCAGGATATTAGACCTTG...AAAATCCCATGCATCTAGAAACTTAGATCCAAGAAACTTACATCCCCTCCCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557179.5
CDS-3UTR TCA 90 bp AAGTTTCTTGGATCTAAGTTTCTAGATGCATGGGATTTTTCCACAGTCTCTGATGGAGGGGTAAGAGACTaGATCAAGGGGAATCGAATA +
Preference number: 4 (lower is better)
Translates to: KFLGSKFLDAWDFSTVSDGGVRD*IKGNRI
Trigger: TATTCGATTCCCCTTGATTCAGTCTCTTACCCCTCC...ATCAGAGACTGTGGAAAAATCCCATGCATCTAGAAACTTAGATCCAAGAAACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000557179.5
CDS-3UTR GCA 90 bp AAGTTTCTTGGATCTAAGTTTCTAGATGCATGGGATTTTTCCACAGTCTCTGATTGCATATCTCACATATaGATGCCTGGCAAGAGGGCT +
Preference number: 4 (lower is better)
Translates to: KFLGSKFLDAWDFSTVSDCISHI*MPGKRA
Trigger: AGCCCTCTTGCCAGGCATGCATATGTGAGATATGCA...ATCAGAGACTGTGGAAAAATCCCATGCATCTAGAAACTTAGATCCAAGAAACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR CCA 90 bp AAGTTTCTTGGATCTAAGTTTCTAGATGCATGGGATTTTTCCACAGTCTCTGATGACAGACAGAATGAATaGTGGGGTGTAGACAGACCT +
Preference number: 4 (lower is better)
Translates to: KFLGSKFLDAWDFSTVSDDRQNE*WGVDRP
Trigger: AGGTCTGTCTACACCCCACCATTCATTCTGTCTGTC...ATCAGAGACTGTGGAAAAATCCCATGCATCTAGAAACTTAGATCCAAGAAACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR CCA 90 bp TGTAAGTTTCTTGGATCTAAGTTTCTAGATGCATGGGATTTTTCCACAGTCTCTCAGGCCTCACAGCAGTaGGAATTTACCTCAGCTAAT +
Preference number: 4 (lower is better)
Translates to: CKFLGSKFLDAWDFSTVSQASQQ*EFTSAN
Trigger: ATTAGCTGAGGTAAATTCCCACTGCTGTGAGGCCTG...AGAGACTGTGGAAAAATCCCATGCATCTAGAAACTTAGATCCAAGAAACTTACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR TCA 90 bp TGTAAGTTTCTTGGATCTAAGTTTCTAGATGCATGGGATTTTTCCACAGTCTCTCTCACAGGACTCAGCTaGGAAGAAGATGTAATCTAC +
Preference number: 4 (lower is better)
Translates to: CKFLGSKFLDAWDFSTVSLTGLS*EEDVIY
Trigger: GTAGATTACATCTTCTTCTCAGCTGAGTCCTGTGAG...AGAGACTGTGGAAAAATCCCATGCATCTAGAAACTTAGATCCAAGAAACTTACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251089.8
ENST00000557179.5
CDS-3UTR TCA 90 bp GAAGGGAGGGGATGTAAGTTTCTTGGATCTAAGTTTCTAGATGCATGGGATTTTCATCAAGAAACGGCCTaGAAGCAAATAACCAATGAA +
Preference number: 4 (lower is better)
Translates to: EGRGCKFLGSKFLDAWDFHQETA*KQITNE
Trigger: TTCATTGGTTATTTGCTTTCAGGCCGTTTCTTGATG...AAAATCCCATGCATCTAGAAACTTAGATCCAAGAAACTTACATCCCCTCCCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR GCA 90 bp AAGTTTCTTGGATCTAAGTTTCTAGATGCATGGGATTTTTCCACAGTCTCTGATGCTTCTAACCATGAATaGAGCAGCACAATGCAAACT +
Preference number: 4 (lower is better)
Translates to: KFLGSKFLDAWDFSTVSDASNHE*SSTMQT
Trigger: AGTTTGCATTGTGCTGCTGCATTCATGGTTAGAAGC...ATCAGAGACTGTGGAAAAATCCCATGCATCTAGAAACTTAGATCCAAGAAACTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR TCA 90 bp AAGTTTCTTGGATCTAAGTTTCTAGATGCATGGGATTTTTCCACAGTCTCTGATGGGAATCGAATAGTATaGACATGTGGTTCCCTAAAT +
Preference number: 4 (lower is better)
Translates to: KFLGSKFLDAWDFSTVSDGNRIV*TCGSLN
Trigger: ATTTAGGGAACCACATGTTCATACTATTCGATTCCC...ATCAGAGACTGTGGAAAAATCCCATGCATCTAGAAACTTAGATCCAAGAAACTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557179.5
CDS-3UTR CCA 90 bp TGTAAGTTTCTTGGATCTAAGTTTCTAGATGCATGGGATTTTTCCACAGTCTCTCACACACTACGTACATaGTATAAACAAGCATATAAG +
Preference number: 4 (lower is better)
Translates to: CKFLGSKFLDAWDFSTVSHTLRT*YKQAYK
Trigger: CTTATATGCTTGTTTATACCATGTACGTAGTGTGTG...AGAGACTGTGGAAAAATCCCATGCATCTAGAAACTTAGATCCAAGAAACTTACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557179.5
CDS GCA 90 bp CCGACCCCACAATTTCTCTGCACCCCCAGGGCCAGGAAAGGGCCCTaGCCGTCCACAGCTCCTCTCCACCTTAACCGCGGCCGGACGCCA +
Preference number: 5 (lower is better)
Translates to: PTPQFLCTPRARKGP*PSTAPLHLNRGRTP
Trigger: TGGCGTCCGGCCGCGGTTAAGGTGGAGAGGAGCTGTGGACGGGCAGGGCCCTTTCCTGGCCCTGGGGGTGCAGAGAAATTGTGGGGTCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554941.1
CDS CCA 90 bp CCACTGCGGGAGGCTGCAACTGCCCCAGGCCCTCAAAGGGCCAGATaGAAGCCTCTTCCTGGGGCACAGGCTCAGGTGCTATGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: PLREAATAPGPQRAR*KPLPGAQAQVLCSR
Trigger: CCTGGAGCATAGCACCTGAGCCTGTGCCCCAGGAAGAGGCTTCCATCTGGCCCTTTGAGGGCCTGGGGCAGTTGCAGCCTCCCGCAGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS CCA 90 bp TGCAACTGCCCCAGGCCCTCAAAGGGCCAGATGGAAGCCTCTTCCTaGGGCACAGGCTCAGGTGCTATGCTCCAGGCCAACACCGCTGGG +
Preference number: 5 (lower is better)
Translates to: CNCPRPSKGQMEASS*GTGSGAMLQANTAG
Trigger: CCCAGCGGTGTTGGCCTGGAGCATAGCACCTGAGCCTGTGCCCCAGGAAGAGGCTTCCATCTGGCCCTTTGAGGGCCTGGGGCAGTTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS TCA 90 bp AGTACTTCGGCCATAAACCTCCCAGAGCCGACCCGCCTCGCCCGCTaGGAATTTGGGCACTCGCCTAGGTCCGAGCTACTACCCCTTCCC +
Preference number: 5 (lower is better)
Translates to: STSAINLPEPTRLAR*EFGHSPRSELLPLP
Trigger: GGGAAGGGGTAGTAGCTCGGACCTAGGCGAGTGCCCAAATTCTCAGCGGGCGAGGCGGGTCGGCTCTGGGAGGTTTATGGCCGAAGTACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554941.1
CDS CCA 90 bp GGGCGGCCACGCTGGGGCAGGAAGTGGGTATATACTGACGTCAGGTaGAGGCAGTGCTGGATGGTACCTACAGTCCTGGAGAAGGCAGGC +
Preference number: 5 (lower is better)
Translates to: GRPRWGRKWVYTDVR*RQCWMVPTVLEKAG
Trigger: GCCTGCCTTCTCCAGGACTGTAGGTACCATCCAGCACTGCCTCCACCTGACGTCAGTATATACCCACTTCCTGCCCCAGCGTGGCCGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251089.8
ENST00000555079.1
ENST00000557179.5
CDS TCA 90 bp CTGGAAGAGAAGCTCTCTTCCCCTGGGAGCCCTGTCATGGGGCGGTaGCTTCCATCCCGAAGCTGGCTAGCAGGCAGAGGTGGTCTGAAG +
Preference number: 5 (lower is better)
Translates to: LEEKLSSPGSPVMGR*LPSRSWLAGRGGLK
Trigger: CTTCAGACCACCTCTGCCTGCTAGCCAGCTTCGGGATGGAAGTCACCGCCCCATGACAGGGCTCCCAGGGGAAGAGAGCTTCTCTTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251089.8
ENST00000557179.5
CDS CCA 90 bp CGCCAGGAGAATGGCCATCTGGGCCAGCTTGACATCGCCCCGGCGTaGGTTGTAAAGGATATGGGTATTTGCCACACACAGCGGGGCCAC +
Preference number: 5 (lower is better)
Translates to: RQENGHLGQLDIAPA*VVKDMGICHTQRGH
Trigger: GTGGCCCCGCTGTGTGTGGCAAATACCCATATCCTTTACAACCCACGCCGGGGCGATGTCAAGCTGGCCCAGATGGCCATTCTCCTGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS CCA 90 bp CATGGGGCGGTGACTTCCATCCCGAAGCTGGCTAGCAGGCAGAGGTaGTCTGAAGAGCAGAAGGGGTTGGGTAAGCCATTGGCAGCCCAG +
Preference number: 5 (lower is better)
Translates to: HGAVTSIPKLASRQR*SEEQKGLGKPLAAQ
Trigger: CTGGGCTGCCAATGGCTTACCCAACCCCTTCTGCTCTTCAGACCACCTCTGCCTGCTAGCCAGCTTCGGGATGGAAGTCACCGCCCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251089.8
ENST00000557179.5
CDS TCA 90 bp AGTGACCTCTGGGCGGCCACGCTGGGGCAGGAAGTGGGTATATACTaGCGTCAGGTGGAGGCAGTGCTGGATGGTACCTACAGTCCTGGA +
Preference number: 5 (lower is better)
Translates to: SDLWAATLGQEVGIY*RQVEAVLDGTYSPG
Trigger: TCCAGGACTGTAGGTACCATCCAGCACTGCCTCCACCTGACGTCAGTATATACCCACTTCCTGCCCCAGCGTGGCCGCCCAGAGGTCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251089.8
ENST00000555079.1
ENST00000557179.5
CDS GCA 90 bp CAGCTTGACATCGCCCCGGCGTGGGTTGTAAAGGATATGGGTATTTaGCACACACAGCGGGGCCACCGAGACTTGTCCCAGGCCTTCTGG +
Preference number: 5 (lower is better)
Translates to: QLDIAPAWVVKDMGI*HTQRGHRDLSQAFW
Trigger: CCAGAAGGCCTGGGACAAGTCTCGGTGGCCCCGCTGTGTGTGGCAAATACCCATATCCTTTACAACCCACGCCGGGGCGATGTCAAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS CCA 90 bp CAACATAACGAAACTTCATCTCTGAGAGGGCGCGGAAGAGGCGCGTaGCCGGCAGCAGCAGGTAACACAAGCACGACGCGATCATGGCCG +
Preference number: 5 (lower is better)
Translates to: QHNETSSLRGRGRGA*PAAAGNTSTTRSWP
Trigger: CGGCCATGATCGCGTCGTGCTTGTGTTACCTGCTGCTGCCGGCCACGCGCCTCTTCCGCGCCCTCTCAGAGATGAAGTTTCGTTATGTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556298.1
CDS-3UTR CAA 90 bp GATTCAGAGGCCTGGTGTGGGTTCTGGGAACCTGTTCAGGTAAGACAGAAAACCGCCATCTGGGCCAGCTaGACATCGCCCCGGCGTGGG +
Preference number: 5 (lower is better)
Translates to: DSEAWCGFWEPVQVRQKTAIWAS*TSPRRG
Trigger: CCCACGCCGGGGCGATGTCAAGCTGGCCCAGATGGC...GGTTTTCTGTCTTACCTGAACAGGTTCCCAGAACCCACACCAGGCCTCTGAATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS CCA 90 bp GTCTCTGATCCAGTGAGCTCTTCTGGAAGAGAAGCTCTCTTCCCCTaGGAGCCCTGTCATGGGGCGGTGACTTCCATCCCGAAGCTGGCT +
Preference number: 5 (lower is better)
Translates to: VSDPVSSSGREALFP*EPCHGAVTSIPKLA
Trigger: AGCCAGCTTCGGGATGGAAGTCACCGCCCCATGACAGGGCTCCCAGGGGAAGAGAGCTTCTCTTCCAGAAGAGCTCACTGGATCAGAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251089.8
ENST00000557179.5
CDS-3UTR CAA 90 bp TGGACTGGTCAGAGGCAGGCATGGCTGTGCAGAAGTCTCACCCCAAGAGGACACGAAGAGCAGAAGGGGTaGGGTAAGCCATTGGCAGCC +
Preference number: 5 (lower is better)
Translates to: WTGQRQAWLCRSLTPRGHEEQKG*GKPLAA
Trigger: GGCTGCCAATGGCTTACCCAACCCCTTCTGCTCTTC...GTGTCCTCTTGGGGTGAGACTTCTGCACAGCCATGCCTGCCTCTGACCAGTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS TCA 90 bp CCACCTTGTCCACTTCCGCCAGGAGAATGGCCATCTGGGCCAGCTTaGCATCGCCCCGGCGTGGGTTGTAAAGGATATGGGTATTTGCCA +
Preference number: 5 (lower is better)
Translates to: PPCPLPPGEWPSGPA*HRPGVGCKGYGYLP
Trigger: TGGCAAATACCCATATCCTTTACAACCCACGCCGGGGCGATGTCAAGCTGGCCCAGATGGCCATTCTCCTGGCGGAAGTGGACAAGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS CCA 90 bp AATGGCATTGTAGTGACCTCTGGGCGGCCACGCTGGGGCAGGAAGTaGGTATATACTGACGTCAGGTGGAGGCAGTGCTGGATGGTACCT +
Preference number: 5 (lower is better)
Translates to: NGIVVTSGRPRWGRK*VYTDVRWRQCWMVP
Trigger: AGGTACCATCCAGCACTGCCTCCACCTGACGTCAGTATATACCCACTTCCTGCCCCAGCGTGGCCGCCCAGAGGTCACTACAATGCCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251089.8
ENST00000555079.1
ENST00000557179.5
CDS CCA 90 bp ATTCCAAGACCCAATGGCATTGTAGTGACCTCTGGGCGGCCACGCTaGGGCAGGAAGTGGGTATATACTGACGTCAGGTGGAGGCAGTGC +
Preference number: 5 (lower is better)
Translates to: IPRPNGIVVTSGRPR*GRKWVYTDVRWRQC
Trigger: GCACTGCCTCCACCTGACGTCAGTATATACCCACTTCCTGCCCCAGCGTGGCCGCCCAGAGGTCACTACAATGCCATTGGGTCTTGGAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251089.8
ENST00000557179.5
CDS-3UTR CAA 90 bp CCACATAAGGGTTCAAACTTCCGCCTCCCTCAGGGAAGCCTGGGGAAAGGGATGCGCATCCCCCAAAATTaGCCACTCCAGGATGTGGGC +
Preference number: 5 (lower is better)
Translates to: PHKGSNFRLPQGSLGKGMRIPQN*PLQDVG
Trigger: GCCCACATCCTGGAGTGGCAAATTTTGGGGGATGCG...CATCCCTTTCCCCAGGCTTCCCTGAGGGAGGCGGAAGTTTGAACCCTTATGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS GCA 90 bp AAGGCTCATCCAGGTTCTCTGCAGCCCGAAGGTCACTCAGCTGCCTaGTGGACCACCTGTCCTCTGAAGCAGCATTCTCTTCTCCAGGAT +
Preference number: 5 (lower is better)
Translates to: KAHPGSLQPEGHSAA*WTTCPLKQHSLLQD
Trigger: ATCCTGGAGAAGAGAATGCTGCTTCAGAGGACAGGTGGTCCAGCAGGCAGCTGAGTGACCTTCGGGCTGCAGAGAACCTGGATGAGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251089.8
ENST00000554941.1
ENST00000556298.1
CDS CCA 90 bp GCAGGCAGAGGTGGTCTGAAGAGCAGAAGGGGTTGGGTAAGCCATTaGCAGCCCAGAGTATCTCTTCAGAGAGAAGGGAGAGACGACCCA +
Preference number: 5 (lower is better)
Translates to: AGRGGLKSRRGWVSH*QPRVSLQREGRDDP
Trigger: TGGGTCGTCTCTCCCTTCTCTCTGAAGAGATACTCTGGGCTGCCAATGGCTTACCCAACCCCTTCTGCTCTTCAGACCACCTCTGCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251089.8
ENST00000557179.5
CDS CCA 90 bp CGAAGCTGGCTAGCAGGCAGAGGTGGTCTGAAGAGCAGAAGGGGTTaGGTAAGCCATTGGCAGCCCAGAGTATCTCTTCAGAGAGAAGGG +
Preference number: 5 (lower is better)
Translates to: RSWLAGRGGLKSRRG*VSHWQPRVSLQREG
Trigger: CCCTTCTCTCTGAAGAGATACTCTGGGCTGCCAATGGCTTACCCAACCCCTTCTGCTCTTCAGACCACCTCTGCCTGCTAGCCAGCTTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251089.8
ENST00000557179.5
CDS CCA 90 bp AGTCCTTTATCTATAAGGGGCCCCTCACTTGCAGTTGAGAGCACCTaGCTCAACCCTTCTTCTCGCCACTGCTGCAGCAGGCCCTCACAT +
Preference number: 5 (lower is better)
Translates to: SPLSIRGPSLAVEST*LNPSSRHCCSRPSH
Trigger: ATGTGAGGGCCTGCTGCAGCAGTGGCGAGAAGAAGGGTTGAGCCAGGTGCTCTCAACTGCAAGTGAGGGGCCCCTTATAGATAAAGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251089.8
ENST00000554941.1
ENST00000556298.1
ENST00000557497.1
CDS CCA 90 bp GCTCATCCAGGTTCTCTGCAGCCCGAAGGTCACTCAGCTGCCTGCTaGACCACCTGTCCTCTGAAGCAGCATTCTCTTCTCCAGGATTAT +
Preference number: 5 (lower is better)
Translates to: AHPGSLQPEGHSAAC*TTCPLKQHSLLQDY
Trigger: ATAATCCTGGAGAAGAGAATGCTGCTTCAGAGGACAGGTGGTCCAGCAGGCAGCTGAGTGACCTTCGGGCTGCAGAGAACCTGGATGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251089.8
ENST00000554941.1
ENST00000556298.1
CDS-3UTR CAA 90 bp ACCACAGGCAGAGAACGCAGCCAGGCCTGGAGAAAGTCTAACCGTGGGAAAAAGGGGTTGGGTAAGCCATaGGCAGCCCAGAGTATCTCT +
Preference number: 5 (lower is better)
Translates to: TTGRERSQAWRKSNRGKKGLGKP*AAQSIS
Trigger: AGAGATACTCTGGGCTGCCAATGGCTTACCCAACCC...CTTTTTCCCACGGTTAGACTTTCTCCAGGCCTGGCTGCGTTCTCTGCCTGTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251089.8
ENST00000557179.5
CDS TCA 90 bp TGTAGAGAGGTGAATCAGGGACAGAATTTAGGTCCCCGCACAAGATaGTGGGGCAGTGGCTGCCATCTGACAGTCTGGCCACCTTGTCCA +
Preference number: 5 (lower is better)
Translates to: CREVNQGQNLGPRTR*WGSGCHLTVWPPCP
Trigger: TGGACAAGGTGGCCAGACTGTCAGATGGCAGCCACTGCCCCATCATCTTGTGCGGGGACCTAAATTCTGTCCCTGATTCACCTCTCTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS CCA 90 bp GAGCCTTGGTTGTTCAGGGAAGCCTTCTGGGGAGTCACCAGATCCTaGACCAGCTGGGTACATCATAACACTGAAAGGCTGAAGCACAGC +
Preference number: 5 (lower is better)
Translates to: EPWLFREAFWGVTRS*TSWVHHNTERLKHS
Trigger: GCTGTGCTTCAGCCTTTCAGTGTTATGATGTACCCAGCTGGTCCAGGATCTGGTGACTCCCCAGAAGGCTTCCCTGAACAACCAAGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557497.1
CDS CCA 90 bp ATCCAGTGTCTGAGTTGCACGATTTCCAGTTTGTGGCTGGAGCCTTaGTTGTTCAGGGAAGCCTTCTGGGGAGTCACCAGATCCTGGACC +
Preference number: 5 (lower is better)
Translates to: IQCLSCTISSLWLEP*LFREAFWGVTRSWT
Trigger: GGTCCAGGATCTGGTGACTCCCCAGAAGGCTTCCCTGAACAACCAAGGCTCCAGCCACAAACTGGAAATCGTGCAACTCAGACACTGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557497.1
CDS-3UTR CAA 90 bp ACCACAGGCAGAGAACGCAGCCAGGCCTGGAGAAAGTCTAACCGTGGGAAAAAGAGACGACCCAGGAGCTaGAGAGTTCCATCTCGATAC +
Preference number: 5 (lower is better)
Translates to: TTGRERSQAWRKSNRGKKRRPRS*RVPSRY
Trigger: GTATCGAGATGGAACTCTCAAGCTCCTGGGTCGTCT...CTTTTTCCCACGGTTAGACTTTCTCCAGGCCTGGCTGCGTTCTCTGCCTGTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251089.8
ENST00000557179.5
CDS-3UTR CAA 90 bp ACCACAGGCAGAGAACGCAGCCAGGCCTGGAGAAAGTCTAACCGTGGGAAAAAGCCGAACTCAAGTCTCTaGACCACTGTCTTCAGTCCC +
Preference number: 5 (lower is better)
Translates to: TTGRERSQAWRKSNRGKKPNSSL*TTVFSP
Trigger: GGGACTGAAGACAGTGGTCAAGAGACTTGAGTTCGG...CTTTTTCCCACGGTTAGACTTTCTCCAGGCCTGGCTGCGTTCTCTGCCTGTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS GCA 90 bp GATGTTATAAGACATCAGAGTGAACTGGAACTGAGGGCCATCTCCTaGCTTCAGGCCCTGAGCATCTGGCTGGGTGGAGAAATCCTCCCA +
Preference number: 5 (lower is better)
Translates to: DVIRHQSELELRAIS*LQALSIWLGGEILP
Trigger: TGGGAGGATTTCTCCACCCAGCCAGATGCTCAGGGCCTGAAGGCAGGAGATGGCCCTCAGTTCCAGTTCACTCTGATGTCTTATAACATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS CCA 90 bp TTGTTCAGGGAAGCCTTCTGGGGAGTCACCAGATCCTGGACCAGCTaGGTACATCATAACACTGAAAGGCTGAAGCACAGCTCTCTTGCG +
Preference number: 5 (lower is better)
Translates to: LFREAFWGVTRSWTS*VHHNTERLKHSSLA
Trigger: CGCAAGAGAGCTGTGCTTCAGCCTTTCAGTGTTATGATGTACCCAGCTGGTCCAGGATCTGGTGACTCCCCAGAAGGCTTCCCTGAACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557497.1
CDS-3UTR CAA 90 bp AATCAGGAAAACACACATCTTATCCCACTTTGCACAGACCCTCCTGAAGTGCAGGGATGTGGGCCCCATTaGTTCCCAGAGCCCAGACGC +
Preference number: 5 (lower is better)
Translates to: NQENTHLIPLCTDPPEVQGCGPH*FPEPRR
Trigger: GCGTCTGGGCTCTGGGAACAAATGGGGCCCACATCC...CTGCACTTCAGGAGGGTCTGTGCAAAGTGGGATAAGATGTGTGTTTTCCTGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS CCA 90 bp ACTGAGGGCCATCTCCTGCCTTCAGGCCCTGAGCATCTGGCTGGGTaGAGAAATCCTCCCATTCTCGCCACAAAATTTCATGATATGGTA +
Preference number: 5 (lower is better)
Translates to: TEGHLLPSGPEHLAG*RNPPILATKFHDMV
Trigger: TACCATATCATGAAATTTTGTGGCGAGAATGGGAGGATTTCTCCACCCAGCCAGATGCTCAGGGCCTGAAGGCAGGAGATGGCCCTCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS CCA 90 bp ATTTCCAGTTTGTGGCTGGAGCCTTGGTTGTTCAGGGAAGCCTTCTaGGGAGTCACCAGATCCTGGACCAGCTGGGTACATCATAACACT +
Preference number: 5 (lower is better)
Translates to: ISSLWLEPWLFREAF*GVTRSWTSWVHHNT
Trigger: AGTGTTATGATGTACCCAGCTGGTCCAGGATCTGGTGACTCCCCAGAAGGCTTCCCTGAACAACCAAGGCTCCAGCCACAAACTGGAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557497.1
CDS CCA 90 bp TGTGAAGAAAGCATCCAGTGTCTGAGTTGCACGATTTCCAGTTTGTaGCTGGAGCCTTGGTTGTTCAGGGAAGCCTTCTGGGGAGTCACC +
Preference number: 5 (lower is better)
Translates to: CEESIQCLSCTISSL*LEPWLFREAFWGVT
Trigger: GGTGACTCCCCAGAAGGCTTCCCTGAACAACCAAGGCTCCAGCCACAAACTGGAAATCGTGCAACTCAGACACTGGATGCTTTCTTCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557497.1
CDS-3UTR CAA 90 bp AAGCCCTGTTCCTCCCAGGCCTCACAGCAGTGGGAATTTACCTCAGCTAATAGAAAAGGATATGGGTATTaGCCACACACAGCGGGGCCA +
Preference number: 5 (lower is better)
Translates to: KPCSSQASQQWEFTSANRKGYGY*PHTAGP
Trigger: TGGCCCCGCTGTGTGTGGCAAATACCCATATCCTTT...TCTATTAGCTGAGGTAAATTCCCACTGCTGTGAGGCCTGGGAGGAACAGGGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR CAA 90 bp AATCAGGAAAACACACATCTTATCCCACTTTGCACAGACCCTCCTGAAGTGCAGGACAGTCTGGCCACCTaGTCCACTTCCGCCAGGAGA +
Preference number: 5 (lower is better)
Translates to: NQENTHLIPLCTDPPEVQDSLAT*STSARR
Trigger: TCTCCTGGCGGAAGTGGACAAGGTGGCCAGACTGTC...CTGCACTTCAGGAGGGTCTGTGCAAAGTGGGATAAGATGTGTGTTTTCCTGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR CAA 90 bp GCAGCTGAGGCCTTGCTGGACAGAGCCAATCCGCAAGTACTGCCACTTCAAATTAAGTCTCGGCCATACTaGCGTCTCTCTGATCTCTTG +
Preference number: 5 (lower is better)
Translates to: AAEALLDRANPQVLPLQIKSRPY*RLSDLL
Trigger: CAAGAGATCAGAGAGACGCAAGTATGGCCGAGACTT...AATTTGAAGTGGCAGTACTTGCGGATTGGCTCTGTCCAGCAAGGCCTCAGCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS TCA 90 bp CCCAGAGTATCTCTTCAGAGAGAAGGGAGAGACGACCCAGGAGCTTaGGAGTTCCATCTCGATACAGCCTGTGATCAGTTCTGTTCCCAT +
Preference number: 5 (lower is better)
Translates to: PRVSLQREGRDDPGA*EFHLDTACDQFCSH
Trigger: ATGGGAACAGAACTGATCACAGGCTGTATCGAGATGGAACTCTCAAGCTCCTGGGTCGTCTCTCCCTTCTCTCTGAAGAGATACTCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251089.8
ENST00000557179.5
CDS CCA 90 bp GCATTCTCTTCTCCAGGATTATCCATCAGAAGTGCCAGGCTGCTCTaGGCTAGTCCTTTATCTATAAGGGGCCCCTCACTTGCAGTTGAG +
Preference number: 5 (lower is better)
Translates to: AFSSPGLSIRSARLL*ASPLSIRGPSLAVE
Trigger: CTCAACTGCAAGTGAGGGGCCCCTTATAGATAAAGGACTAGCCCAGAGCAGCCTGGCACTTCTGATGGATAATCCTGGAGAAGAGAATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251089.8
ENST00000554941.1
ENST00000556298.1
ENST00000557497.1
CDS-3UTR CAA 90 bp GGATGTAAGTTTCTTGGATCTAAGTTTCTAGATGCATGGGATTTTTCCACAGTCCGGGGCCACCGAGACTaGTCCCAGGCCTTCTGGGAC +
Preference number: 5 (lower is better)
Translates to: GCKFLGSKFLDAWDFSTVRGHRD*SQAFWD
Trigger: GTCCCAGAAGGCCTGGGACAAGTCTCGGTGGCCCCG...GACTGTGGAAAAATCCCATGCATCTAGAAACTTAGATCCAAGAAACTTACATCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR CAA 90 bp ACCACAGGCAGAGAACGCAGCCAGGCCTGGAGAAAGTCTAACCGTGGGAAAAAGGAATCATTCTCTCACTaGGGAAGGACAGAAGAAAGC +
Preference number: 5 (lower is better)
Translates to: TTGRERSQAWRKSNRGKKESFSH*GRTEES
Trigger: GCTTTCTTCTGTCCTTCCCAAGTGAGAGAATGATTC...CTTTTTCCCACGGTTAGACTTTCTCCAGGCCTGGCTGCGTTCTCTGCCTGTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR CAA 90 bp CCTGTTCCTCCCAGGCCTCACAGCAGTGGGAATTTACCTCAGCTAATAGAGGGAGAGAGGAACAGAAAATaGCTTCTTAGGAGTGGAGAG +
Preference number: 5 (lower is better)
Translates to: PVPPRPHSSGNLPQLIEGERNRK*LLRSGE
Trigger: CTCTCCACTCCTAAGAAGCAATTTTCTGTTCCTCTC...TCCCTCTATTAGCTGAGGTAAATTCCCACTGCTGTGAGGCCTGGGAGGAACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR CAA 90 bp GCAGCTGAGGCCTTGCTGGACAGAGCCAATCCGCAAGTACTGCCACTTCAAATTTACTACATAGGGAGGTaGGAAGACAAAAGCACCAAC +
Preference number: 5 (lower is better)
Translates to: AAEALLDRANPQVLPLQIYYIGR*EDKSTN
Trigger: GTTGGTGCTTTTGTCTTCCAACCTCCCTATGTAGTA...AATTTGAAGTGGCAGTACTTGCGGATTGGCTCTGTCCAGCAAGGCCTCAGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR CAA 90 bp TACCTACAGTCACCAGCTGAACAGGCCAAGAGGACAAATGATGTTTCTAATTCCAGACGACCCAGGAGCTaGAGAGTTCCATCTCGATAC +
Preference number: 5 (lower is better)
Translates to: YLQSPAEQAKRTNDVSNSRRPRS*RVPSRY
Trigger: GTATCGAGATGGAACTCTCAAGCTCCTGGGTCGTCT...GGAATTAGAAACATCATTTGTCCTCTTGGCCTGTTCAGCTGGTGACTGTAGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR CAA 90 bp GAAGGGAGGGGATGTAAGTTTCTTGGATCTAAGTTTCTAGATGCATGGGATTTTGAAGAGCAGAAGGGGTaGGGTAAGCCATTGGCAGCC +
Preference number: 5 (lower is better)
Translates to: EGRGCKFLGSKFLDAWDFEEQKG*GKPLAA
Trigger: GGCTGCCAATGGCTTACCCAACCCCTTCTGCTCTTC...AAAATCCCATGCATCTAGAAACTTAGATCCAAGAAACTTACATCCCCTCCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251089.8
ENST00000557179.5
CDS-3UTR CAA 90 bp TGCCACCCGCATCATGTCTCATGCAGCTGCCATAGCTTTAATCAGGAAAACACATGCCACTTCAAATTCTaGGACCAGTTTTGTCCAAGG +
Preference number: 5 (lower is better)
Translates to: CHPHHVSCSCHSFNQENTCHFKF*DQFCPR
Trigger: CCTTGGACAAAACTGGTCCAAGAATTTGAAGTGGCA...TGTGTTTTCCTGATTAAAGCTATGGCAGCTGCATGAGACATGATGCGGGTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS TCA 90 bp ATACAGCCTGTGATCAGTTCTGTTCCCATTCTCACAGGACTCAGCTaGGAAGAAGATGTAATCTACTGTCATTCCAAGACCCAATGGCAT +
Preference number: 5 (lower is better)
Translates to: IQPVISSVPILTGLS*EEDVIYCHSKTQWH
Trigger: ATGCCATTGGGTCTTGGAATGACAGTAGATTACATCTTCTTCTCAGCTGAGTCCTGTGAGAATGGGAACAGAACTGATCACAGGCTGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251089.8
ENST00000557179.5
CDS-3UTR CAA 90 bp AAGTTTCTTGGATCTAAGTTTCTAGATGCATGGGATTTTTCCACAGTCTCTGATGGGTTGGGTAAGCCATaGGCAGCCCAGAGTATCTCT +
Preference number: 5 (lower is better)
Translates to: KFLGSKFLDAWDFSTVSDGLGKP*AAQSIS
Trigger: AGAGATACTCTGGGCTGCCAATGGCTTACCCAACCC...ATCAGAGACTGTGGAAAAATCCCATGCATCTAGAAACTTAGATCCAAGAAACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251089.8
ENST00000557179.5
CDS TCA 90 bp GGTTTATCCTCATCTTTGGATCTTCTGGATCAAGGTCTAATATCCTaGACCTATTACTGGGTAACCACAGGGTCAAACCAAATGGGAAAG +
Preference number: 5 (lower is better)
Translates to: GLSSSLDLLDQGLIS*TYYWVTTGSNQMGK
Trigger: CTTTCCCATTTGGTTTGACCCTGTGGTTACCCAGTAATAGGTTCAGGATATTAGACCTTGATCCAGAAGATCCAAAGATGAGGATAAACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557179.5
CDS-3UTR CAA 90 bp GAAGGGAGGGGATGTAAGTTTCTTGGATCTAAGTTTCTAGATGCATGGGATTTTGTAACAGCCCATGTTTaGGGACATGTGGACAAATAC +
Preference number: 5 (lower is better)
Translates to: EGRGCKFLGSKFLDAWDFVTAHV*GHVDKY
Trigger: GTATTTGTCCACATGTCCCAAAACATGGGCTGTTAC...AAAATCCCATGCATCTAGAAACTTAGATCCAAGAAACTTACATCCCCTCCCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557179.5
CDS-3UTR CAA 90 bp TGTAAGTTTCTTGGATCTAAGTTTCTAGATGCATGGGATTTTTCCACAGTCTCTATTCTTGGACCAGTTTaGTCCAAGGCCACCTTTCTG +
Preference number: 5 (lower is better)
Translates to: CKFLGSKFLDAWDFSTVSILGPV*SKATFL
Trigger: CAGAAAGGTGGCCTTGGACAAAACTGGTCCAAGAAT...AGAGACTGTGGAAAAATCCCATGCATCTAGAAACTTAGATCCAAGAAACTTACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR CAA 90 bp TGTAAGTTTCTTGGATCTAAGTTTCTAGATGCATGGGATTTTTCCACAGTCTCTTTTTTACTAAATCAATaGAGGGGATCGCAACCCAGG +
Preference number: 5 (lower is better)
Translates to: CKFLGSKFLDAWDFSTVSFLLNQ*RGSQPR
Trigger: CCTGGGTTGCGATCCCCTCAATTGATTTAGTAAAAA...AGAGACTGTGGAAAAATCCCATGCATCTAGAAACTTAGATCCAAGAAACTTACA
39% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS-3UTR CAA 90 bp AAGTTTCTTGGATCTAAGTTTCTAGATGCATGGGATTTTTCCACAGTCTCTGATGGTTTATCCTCATCTTaGGATCTTCTGGATCAAGGT +
Preference number: 5 (lower is better)
Translates to: KFLGSKFLDAWDFSTVSDGLSSS*DLLDQG
Trigger: ACCTTGATCCAGAAGATCCAAAGATGAGGATAAACC...ATCAGAGACTGTGGAAAAATCCCATGCATCTAGAAACTTAGATCCAAGAAACTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557179.5
CDS-3UTR CAA 90 bp TGTAAGTTTCTTGGATCTAAGTTTCTAGATGCATGGGATTTTTCCACAGTCTCTCTCAGGGGCTTTAAGTaGCAATGGTTAAAGGTTTAT +
Preference number: 5 (lower is better)
Translates to: CKFLGSKFLDAWDFSTVSLRGFK*QWLKVY
Trigger: ATAAACCTTTAACCATTGCAACTTAAAGCCCCTGAG...AGAGACTGTGGAAAAATCCCATGCATCTAGAAACTTAGATCCAAGAAACTTACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557179.5
CDS GCA 72 bp GGGAGGGCAGCACAGTCTGCATACTGGGGCTCCGACTaGATGGGGATAGCTGCCCACATGGAGCCCTCCACC +
Preference number: 6 (lower is better)
Translates to: GRAAQSAYWGSD*MGIAAHMEPST
Trigger: GGTGGAGGGCTCCATGTGGGCAGCTATCCCCATGCAGTCGGAGCCCCAGTATGCAGACTGTGCTGCCCTCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251089.8
ENST00000554941.1
ENST00000556298.1
CDS CAA 72 bp ACCTCCCAGAGCCGACCCGCCTCGCCCGCTGAGAATTaGGGCACTCGCCTAGGTCCGAGCTACTACCCCTTC +
Preference number: 6 (lower is better)
Translates to: TSQSRPASPAEN*GTRLGPSYYPF
Trigger: GAAGGGGTAGTAGCTCGGACCTAGGCGAGTGCCCAAATTCTCAGCGGGCGAGGCGGGTCGGCTCTGGGAGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554941.1
CDS CCA 72 bp AGGGCACCCACTGGGAGGGCAGCACAGTCTGCATACTaGGGCTCCGACTGCATGGGGATAGCTGCCCACATG +
Preference number: 6 (lower is better)
Translates to: RAPTGRAAQSAY*GSDCMGIAAHM
Trigger: CATGTGGGCAGCTATCCCCATGCAGTCGGAGCCCCAGTATGCAGACTGTGCTGCCCTCCCAGTGGGTGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251089.8
ENST00000556298.1
CDS CCA 72 bp CCCAGGCCCTCAAAGGGCCAGATGGAAGCCTCTTCCTaGGGCACAGGCTCAGGTGCTATGCTCCAGGCCAAC +
Preference number: 6 (lower is better)
Translates to: PRPSKGQMEASS*GTGSGAMLQAN
Trigger: GTTGGCCTGGAGCATAGCACCTGAGCCTGTGCCCCAGGAAGAGGCTTCCATCTGGCCCTTTGAGGGCCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS CCA 72 bp GAGGCTGCAACTGCCCCAGGCCCTCAAAGGGCCAGATaGAAGCCTCTTCCTGGGGCACAGGCTCAGGTGCTA +
Preference number: 6 (lower is better)
Translates to: EAATAPGPQRAR*KPLPGAQAQVL
Trigger: TAGCACCTGAGCCTGTGCCCCAGGAAGAGGCTTCCATCTGGCCCTTTGAGGGCCTGGGGCAGTTGCAGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS TCA 72 bp AAGCTCTCTTCCCCTGGGAGCCCTGTCATGGGGCGGTaGCTTCCATCCCGAAGCTGGCTAGCAGGCAGAGGT +
Preference number: 6 (lower is better)
Translates to: KLSSPGSPVMGR*LPSRSWLAGRG
Trigger: ACCTCTGCCTGCTAGCCAGCTTCGGGATGGAAGTCACCGCCCCATGACAGGGCTCCCAGGGGAAGAGAGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251089.8
ENST00000557179.5
CDS TCA 72 bp GCCATAAACCTCCCAGAGCCGACCCGCCTCGCCCGCTaGGAATTTGGGCACTCGCCTAGGTCCGAGCTACTA +
Preference number: 6 (lower is better)
Translates to: AINLPEPTRLAR*EFGHSPRSELL
Trigger: TAGTAGCTCGGACCTAGGCGAGTGCCCAAATTCTCAGCGGGCGAGGCGGGTCGGCTCTGGGAGGTTTATGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554941.1
CDS CCA 72 bp GAAACTTCATCTCTGAGAGGGCGCGGAAGAGGCGCGTaGCCGGCAGCAGCAGGTAACACAAGCACGACGCGA +
Preference number: 6 (lower is better)
Translates to: ETSSLRGRGRGA*PAAAGNTSTTR
Trigger: TCGCGTCGTGCTTGTGTTACCTGCTGCTGCCGGCCACGCGCCTCTTCCGCGCCCTCTCAGAGATGAAGTTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556298.1
CDS CAA 72 bp ATGGGGCAGTGGCTGCCATCTGACAGTCTGGCCACCTaGTCCACTTCCGCCAGGAGAATGGCCATCTGGGCC +
Preference number: 6 (lower is better)
Translates to: MGQWLPSDSLAT*STSARRMAIWA
Trigger: GGCCCAGATGGCCATTCTCCTGGCGGAAGTGGACAAGGTGGCCAGACTGTCAGATGGCAGCCACTGCCCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS TCA 72 bp CCACTTCCGCCAGGAGAATGGCCATCTGGGCCAGCTTaGCATCGCCCCGGCGTGGGTTGTAAAGGATATGGG +
Preference number: 6 (lower is better)
Translates to: PLPPGEWPSGPA*HRPGVGCKGYG
Trigger: CCCATATCCTTTACAACCCACGCCGGGGCGATGTCAAGCTGGCCCAGATGGCCATTCTCCTGGCGGAAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS TCA 72 bp TGGGCGGCCACGCTGGGGCAGGAAGTGGGTATATACTaGCGTCAGGTGGAGGCAGTGCTGGATGGTACCTAC +
Preference number: 6 (lower is better)
Translates to: WAATLGQEVGIY*RQVEAVLDGTY
Trigger: GTAGGTACCATCCAGCACTGCCTCCACCTGACGTCAGTATATACCCACTTCCTGCCCCAGCGTGGCCGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251089.8
ENST00000555079.1
ENST00000557179.5
CDS CCA 72 bp CCCAATGGCATTGTAGTGACCTCTGGGCGGCCACGCTaGGGCAGGAAGTGGGTATATACTGACGTCAGGTGG +
Preference number: 6 (lower is better)
Translates to: PNGIVVTSGRPR*GRKWVYTDVRW
Trigger: CCACCTGACGTCAGTATATACCCACTTCCTGCCCCAGCGTGGCCGCCCAGAGGTCACTACAATGCCATTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251089.8
ENST00000555079.1
ENST00000557179.5
CDS CCA 72 bp TCTATAAGGGGCCCCTCACTTGCAGTTGAGAGCACCTaGCTCAACCCTTCTTCTCGCCACTGCTGCAGCAGG +
Preference number: 6 (lower is better)
Translates to: SIRGPSLAVEST*LNPSSRHCCSR
Trigger: CCTGCTGCAGCAGTGGCGAGAAGAAGGGTTGAGCCAGGTGCTCTCAACTGCAAGTGAGGGGCCCCTTATAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251089.8
ENST00000554941.1
ENST00000556298.1
ENST00000557497.1
CDS CCA 72 bp GGTTCTCTGCAGCCCGAAGGTCACTCAGCTGCCTGCTaGACCACCTGTCCTCTGAAGCAGCATTCTCTTCTC +
Preference number: 6 (lower is better)
Translates to: GSLQPEGHSAAC*TTCPLKQHSLL
Trigger: GAGAAGAGAATGCTGCTTCAGAGGACAGGTGGTCCAGCAGGCAGCTGAGTGACCTTCGGGCTGCAGAGAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251089.8
ENST00000554941.1
ENST00000556298.1
CDS CAA 90 bp AGCAGGCAGAGGTGGTCTGAAGAGCAGAAGGGGTTGGGTAAGCCATaGGCAGCCCAGAGTATCTCTTCAGAGAGAAGGGAGAGACGACCC +
Preference number: 6 (lower is better)
Translates to: SRQRWSEEQKGLGKP*AAQSISSERRERRP
Trigger: GGGTCGTCTCTCCCTTCTCTCTGAAGAGATACTCTGGGCTGCCAATGGCTTACCCAACCCCTTCTGCTCTTCAGACCACCTCTGCCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251089.8
ENST00000557179.5
CDS CAA 90 bp CCGAAGCTGGCTAGCAGGCAGAGGTGGTCTGAAGAGCAGAAGGGGTaGGGTAAGCCATTGGCAGCCCAGAGTATCTCTTCAGAGAGAAGG +
Preference number: 6 (lower is better)
Translates to: PKLASRQRWSEEQKG*GKPLAAQSISSERR
Trigger: CCTTCTCTCTGAAGAGATACTCTGGGCTGCCAATGGCTTACCCAACCCCTTCTGCTCTTCAGACCACCTCTGCCTGCTAGCCAGCTTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251089.8
ENST00000557179.5
CDS GCA 72 bp AGACATCAGAGTGAACTGGAACTGAGGGCCATCTCCTaGCTTCAGGCCCTGAGCATCTGGCTGGGTGGAGAA +
Preference number: 6 (lower is better)
Translates to: RHQSELELRAIS*LQALSIWLGGE
Trigger: TTCTCCACCCAGCCAGATGCTCAGGGCCTGAAGGCAGGAGATGGCCCTCAGTTCCAGTTCACTCTGATGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS CCA 72 bp GTGACTTCCATCCCGAAGCTGGCTAGCAGGCAGAGGTaGTCTGAAGAGCAGAAGGGGTTGGGTAAGCCATTG +
Preference number: 6 (lower is better)
Translates to: VTSIPKLASRQR*SEEQKGLGKPL
Trigger: CAATGGCTTACCCAACCCCTTCTGCTCTTCAGACCACCTCTGCCTGCTAGCCAGCTTCGGGATGGAAGTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251089.8
ENST00000557179.5
CDS TCA 72 bp GTGAATCAGGGACAGAATTTAGGTCCCCGCACAAGATaGTGGGGCAGTGGCTGCCATCTGACAGTCTGGCCA +
Preference number: 6 (lower is better)
Translates to: VNQGQNLGPRTR*WGSGCHLTVWP
Trigger: TGGCCAGACTGTCAGATGGCAGCCACTGCCCCATCATCTTGTGCGGGGACCTAAATTCTGTCCCTGATTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS CCA 72 bp AATGGCCATCTGGGCCAGCTTGACATCGCCCCGGCGTaGGTTGTAAAGGATATGGGTATTTGCCACACACAG +
Preference number: 6 (lower is better)
Translates to: NGHLGQLDIAPA*VVKDMGICHTQ
Trigger: CTGTGTGTGGCAAATACCCATATCCTTTACAACCCACGCCGGGGCGATGTCAAGCTGGCCCAGATGGCCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251089.8
CDS CCA 72 bp GGGTATATACTGACGTCAGGTGGAGGCAGTGCTGGATaGTACCTACAGTCCTGGAGAAGGCAGGCTCAAGCT +
Preference number: 6 (lower is better)
Translates to: GYILTSGGGSAG*YLQSWRRQAQA
Trigger: AGCTTGAGCCTGCCTTCTCCAGGACTGTAGGTACCATCCAGCACTGCCTCCACCTGACGTCAGTATATACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251089.8
ENST00000555079.1
ENST00000557179.5
CDS CCA 72 bp CTAGCAGGCAGAGGTGGTCTGAAGAGCAGAAGGGGTTaGGTAAGCCATTGGCAGCCCAGAGTATCTCTTCAG +
Preference number: 6 (lower is better)
Translates to: LAGRGGLKSRRG*VSHWQPRVSLQ
Trigger: CTGAAGAGATACTCTGGGCTGCCAATGGCTTACCCAACCCCTTCTGCTCTTCAGACCACCTCTGCCTGCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251089.8
ENST00000557179.5
CDS CAA 72 bp GCTAGCAGGCAGAGGTGGTCTGAAGAGCAGAAGGGGTaGGGTAAGCCATTGGCAGCCCAGAGTATCTCTTCA +
Preference number: 6 (lower is better)
Translates to: ASRQRWSEEQKG*GKPLAAQSISS
Trigger: TGAAGAGATACTCTGGGCTGCCAATGGCTTACCCAACCCCTTCTGCTCTTCAGACCACCTCTGCCTGCTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251089.8
ENST00000557179.5
CDS CAA 90 bp CATCCAGTGTCTGAGTTGCACGATTTCCAGTTTGTGGCTGGAGCCTaGGTTGTTCAGGGAAGCCTTCTGGGGAGTCACCAGATCCTGGAC +
Preference number: 6 (lower is better)
Translates to: HPVSELHDFQFVAGA*VVQGSLLGSHQILD
Trigger: GTCCAGGATCTGGTGACTCCCCAGAAGGCTTCCCTGAACAACCAAGGCTCCAGCCACAAACTGGAAATCGTGCAACTCAGACACTGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557497.1
CDS CCA 72 bp GGTGGTCTGAAGAGCAGAAGGGGTTGGGTAAGCCATTaGCAGCCCAGAGTATCTCTTCAGAGAGAAGGGAGA +
Preference number: 6 (lower is better)
Translates to: GGLKSRRGWVSH*QPRVSLQREGR
Trigger: TCTCCCTTCTCTCTGAAGAGATACTCTGGGCTGCCAATGGCTTACCCAACCCCTTCTGCTCTTCAGACCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251089.8
ENST00000557179.5
CDS CCA 72 bp GAAGCCTTCTGGGGAGTCACCAGATCCTGGACCAGCTaGGTACATCATAACACTGAAAGGCTGAAGCACAGC +
Preference number: 6 (lower is better)
Translates to: EAFWGVTRSWTS*VHHNTERLKHS
Trigger: GCTGTGCTTCAGCCTTTCAGTGTTATGATGTACCCAGCTGGTCCAGGATCTGGTGACTCCCCAGAAGGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557497.1
CDS CAA 72 bp AGGTGGTCTGAAGAGCAGAAGGGGTTGGGTAAGCCATaGGCAGCCCAGAGTATCTCTTCAGAGAGAAGGGAG +
Preference number: 6 (lower is better)
Translates to: RWSEEQKGLGKP*AAQSISSERRE
Trigger: CTCCCTTCTCTCTGAAGAGATACTCTGGGCTGCCAATGGCTTACCCAACCCCTTCTGCTCTTCAGACCACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251089.8
ENST00000557179.5
CDS CAA 72 bp TCTGAGTTGCACGATTTCCAGTTTGTGGCTGGAGCCTaGGTTGTTCAGGGAAGCCTTCTGGGGAGTCACCAG +
Preference number: 6 (lower is better)
Translates to: SELHDFQFVAGA*VVQGSLLGSHQ
Trigger: CTGGTGACTCCCCAGAAGGCTTCCCTGAACAACCAAGGCTCCAGCCACAAACTGGAAATCGTGCAACTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557497.1
CDS CCA 72 bp GAAGAAGATGTAATCTACTGTCATTCCAAGACCCAATaGCATTGTAGTGACCTCTGGGCGGCCACGCTGGGG +
Preference number: 6 (lower is better)
Translates to: EEDVIYCHSKTQ*HCSDLWAATLG
Trigger: CCCCAGCGTGGCCGCCCAGAGGTCACTACAATGCCATTGGGTCTTGGAATGACAGTAGATTACATCTTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251089.8
ENST00000557179.5
CDS CCA 72 bp TTGTTCAGGGAAGCCTTCTGGGGAGTCACCAGATCCTaGACCAGCTGGGTACATCATAACACTGAAAGGCTG +
Preference number: 6 (lower is better)
Translates to: LFREAFWGVTRS*TSWVHHNTERL
Trigger: CAGCCTTTCAGTGTTATGATGTACCCAGCTGGTCCAGGATCTGGTGACTCCCCAGAAGGCTTCCCTGAACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557497.1
CDS CCA 72 bp AGCATCCAGTGTCTGAGTTGCACGATTTCCAGTTTGTaGCTGGAGCCTTGGTTGTTCAGGGAAGCCTTCTGG +
Preference number: 6 (lower is better)
Translates to: SIQCLSCTISSL*LEPWLFREAFW
Trigger: CCAGAAGGCTTCCCTGAACAACCAAGGCTCCAGCCACAAACTGGAAATCGTGCAACTCAGACACTGGATGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557497.1
CDS CAA 90 bp ACATGTGAAGAAAGCATCCAGTGTCTGAGTTGCACGATTTCCAGTTaGTGGCTGGAGCCTTGGTTGTTCAGGGAAGCCTTCTGGGGAGTC +
Preference number: 6 (lower is better)
Translates to: TCEESIQCLSCTISS*WLEPWLFREAFWGV
Trigger: GACTCCCCAGAAGGCTTCCCTGAACAACCAAGGCTCCAGCCACAAACTGGAAATCGTGCAACTCAGACACTGGATGCTTTCTTCACATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557497.1
CDS CCA 72 bp TCTCCAGGATTATCCATCAGAAGTGCCAGGCTGCTCTaGGCTAGTCCTTTATCTATAAGGGGCCCCTCACTT +
Preference number: 6 (lower is better)
Translates to: SPGLSIRSARLL*ASPLSIRGPSL
Trigger: AAGTGAGGGGCCCCTTATAGATAAAGGACTAGCCCAGAGCAGCCTGGCACTTCTGATGGATAATCCTGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251089.8
ENST00000554941.1
ENST00000556298.1
ENST00000557497.1
CDS CAA 72 bp GAAAGCATCCAGTGTCTGAGTTGCACGATTTCCAGTTaGTGGCTGGAGCCTTGGTTGTTCAGGGAAGCCTTC +
Preference number: 6 (lower is better)
Translates to: ESIQCLSCTISS*WLEPWLFREAF
Trigger: GAAGGCTTCCCTGAACAACCAAGGCTCCAGCCACAAACTGGAAATCGTGCAACTCAGACACTGGATGCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557497.1
CDS CAA 90 bp AACATGATGGCAGCTCTTCACAGTCACCTAATTAAGGGGCTTGGGTaGGGTCCTGACTCAGAGGGAAATACAACACCACTGAGAGGAACC +
Preference number: 6 (lower is better)
Translates to: NMMAALHSHLIKGLG*GPDSEGNTTPLRGT
Trigger: GGTTCCTCTCAGTGGTGTTGTATTTCCCTCTGAGTCAGGACCCAACCCAAGCCCCTTAATTAGGTGACTGTGAAGAGCTGCCATCATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557497.1
CDS CAA 90 bp TACAATTCTCCTCCACAGGGAATATCAACTCTCAGGGGCTTTAAGTaGCAATGGTTAAAGGTTTATCCTCATCTTTGGATCTTCTGGATC +
Preference number: 6 (lower is better)
Translates to: YNSPPQGISTLRGFK*QWLKVYPHLWIFWI
Trigger: GATCCAGAAGATCCAAAGATGAGGATAAACCTTTAACCATTGCAACTTAAAGCCCCTGAGAGTTGATATTCCCTGTGGAGGAGAATTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557179.5