RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ANAPC4 (Homo sapiens)

Ensembl gene IDs: ENSG00000053900

Ensembl transcript IDs: ENST00000315368.8, ENST00000503805.5, ENST00000504256.5, ENST00000505080.1, ENST00000505842.5, ENST00000505991.1, ENST00000506973.1, ENST00000507809.1, ENST00000510092.5, ENST00000515848.1

Found 153 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR TCA 90 bp TGCTTTCTACTGTCACTTCCATCCAATGCATACAGGAAACTGGAGCCTCCACAGTGTTGGCCAAAGCAATaGGATCCCGCTTGGGCGACC +
Preference number: 4 (lower is better)
Translates to: CFLLSLPSNAYRKLEPPQCWPKQ*DPAWAT
Trigger: GGTCGCCCAAGCGGGATCTCATTGCTTTGGCCAACA...CTGTGGAGGCTCCAGTTTCCTGTATGCATTGGATGGAAGTGACAGTAGAAAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505080.1
CDS-3UTR GCA 90 bp TGTTACACAAAGGTGGTCCAAGACATCTTAGTCCATCTCCTATGTCCTTTTGGCATCTCCTGCGGGAGCTaGTTCTCTCCCACCACCCGG +
Preference number: 4 (lower is better)
Translates to: CYTKVVQDILVHLLCPFGISCGS*FSPTTR
Trigger: CCGGGTGGTGGGAGAGAAGCAGCTCCCGCAGGAGAT...GCCAAAAGGACATAGGAGATGGACTAAGATGTCTTGGACCACCTTTGTGTAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS-3UTR CCA 90 bp AAGGTGGTCCAAGACATCTTAGTCCATCTCCTATGTCCTTTTGGCCATAATTACCTAACACGGCCCCAGTaGCCTCTCCCCTCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: KVVQDILVHLLCPFGHNYLTRPQ*PLPSLC
Trigger: GCAGAGGGAGGGGAGAGGCCACTGGGGCCGTGTTAG...GTAATTATGGCCAAAAGGACATAGGAGATGGACTAAGATGTCTTGGACCACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315368.8
CDS-3UTR GCA 90 bp GTCCAAGACATCTTAGTCCATCTCCTATGTCCTTTTGGCCATAATTACACACACATCTCCTGCGGGAGCTaGTTCTCTCCCACCACCCGG +
Preference number: 4 (lower is better)
Translates to: VQDILVHLLCPFGHNYTHISCGS*FSPTTR
Trigger: CCGGGTGGTGGGAGAGAAGCAGCTCCCGCAGGAGAT...GTGTGTGTAATTATGGCCAAAAGGACATAGGAGATGGACTAAGATGTCTTGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS-3UTR GCA 90 bp AATGATGTGAGAACACTGCTTTCTACTGTCACTTCCATCCAATGCATACAGGAAATCTCCTGCGGGAGCTaGTTCTCTCCCACCACCCGG +
Preference number: 4 (lower is better)
Translates to: NDVRTLLSTVTSIQCIQEISCGS*FSPTTR
Trigger: CCGGGTGGTGGGAGAGAAGCAGCTCCCGCAGGAGAT...TTCCTGTATGCATTGGATGGAAGTGACAGTAGAAAGCAGTGTTCTCACATCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505080.1
CDS-3UTR CCA 90 bp AGAACACTGCTTTCTACTGTCACTTCCATCCAATGCATACAGGAAACTGGAGCCTCGGAAAACGCAACATaGGGACGGCCCTGCAAGAGT +
Preference number: 4 (lower is better)
Translates to: RTLLSTVTSIQCIQETGASENAT*GRPCKS
Trigger: ACTCTTGCAGGGCCGTCCCCATGTTGCGTTTTCCGA...GGCTCCAGTTTCCTGTATGCATTGGATGGAAGTGACAGTAGAAAGCAGTGTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505080.1
CDS-3UTR TCA 90 bp GTGGTCCAAGACATCTTAGTCCATCTCCTATGTCCTTTTGGCCATAATTACACATGTTGGCCAAAGCAATaGGATCCCGCTTGGGCGACC +
Preference number: 4 (lower is better)
Translates to: VVQDILVHLLCPFGHNYTCWPKQ*DPAWAT
Trigger: GGTCGCCCAAGCGGGATCTCATTGCTTTGGCCAACA...TGTGTAATTATGGCCAAAAGGACATAGGAGATGGACTAAGATGTCTTGGACCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS-3UTR GCA 90 bp TGCTTTCTACTGTCACTTCCATCCAATGCATACAGGAAACTGGAGCCTCCACAGAGGAAAATAATCTCCTaGGGGAGCTGCTTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: CFLLSLPSNAYRKLEPPQRKIIS*GSCFSP
Trigger: GGGAGAGAAGCAGCTCCCGCAGGAGATTATTTTCCT...CTGTGGAGGCTCCAGTTTCCTGTATGCATTGGATGGAAGTGACAGTAGAAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505080.1
CDS-3UTR TCA 90 bp CTTTGTTACACAAAGGTGGTCCAAGACATCTTAGTCCATCTCCTATGTCCTTTTTGTTGGCCAAAGCAATaGGATCCCGCTTGGGCGACC +
Preference number: 4 (lower is better)
Translates to: LCYTKVVQDILVHLLCPFCWPKQ*DPAWAT
Trigger: GGTCGCCCAAGCGGGATCTCATTGCTTTGGCCAACA...AAAAGGACATAGGAGATGGACTAAGATGTCTTGGACCACCTTTGTGTAACAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS-3UTR GCA 90 bp GTCCAAGACATCTTAGTCCATCTCCTATGTCCTTTTGGCCATAATTACACACACGCCATCTGGTCTCCATaGCAGACACGTCACCTCCTT +
Preference number: 4 (lower is better)
Translates to: VQDILVHLLCPFGHNYTHAIWSP*QTRHLL
Trigger: AAGGAGGTGACGTGTCTGGCATGGAGACCAGATGGC...GTGTGTGTAATTATGGCCAAAAGGACATAGGAGATGGACTAAGATGTCTTGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS-3UTR GCA 90 bp TTGTTACACAAAGGTGGTCCAAGACATCTTAGTCCATCTCCTATGTCCTTTTGGGCCATCTGGTCTCCATaGCAGACACGTCACCTCCTT +
Preference number: 4 (lower is better)
Translates to: LLHKGGPRHLSPSPMSFWAIWSP*QTRHLL
Trigger: AAGGAGGTGACGTGTCTGGCATGGAGACCAGATGGC...CCAAAAGGACATAGGAGATGGACTAAGATGTCTTGGACCACCTTTGTGTAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS-3UTR TCA 90 bp GTGGTCCAAGACATCTTAGTCCATCTCCTATGTCCTTTTGGCCATAATTACACACTCCTCCTCTTCATCTaGAGACTCATCGAGCTCCCA +
Preference number: 4 (lower is better)
Translates to: VVQDILVHLLCPFGHNYTLLLFI*RLIELP
Trigger: TGGGAGCTCGATGAGTCTTCAGATGAAGAGGAGGAG...TGTGTAATTATGGCCAAAAGGACATAGGAGATGGACTAAGATGTCTTGGACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS-3UTR TCA 90 bp TACACAAAGGTGGTCCAAGACATCTTAGTCCATCTCCTATGTCCTTTTGGCCATTTGGTTCTCTGCCTCTaGCTCCGACAACACTTCTTC +
Preference number: 4 (lower is better)
Translates to: YTKVVQDILVHLLCPFGHLVLCL*LRQHFF
Trigger: GAAGAAGTGTTGTCGGAGTCAGAGGCAGAGAACCAA...ATGGCCAAAAGGACATAGGAGATGGACTAAGATGTCTTGGACCACCTTTGTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS-3UTR GCA 90 bp AACACTGCTTTCTACTGTCACTTCCATCCAATGCATACAGGAAACTGGAGCCTCGTCACTTCCATCCAATaGATACAGGAAACTGGAGCC +
Preference number: 4 (lower is better)
Translates to: NTAFYCHFHPMHTGNWSLVTSIQ*IQETGA
Trigger: GGCTCCAGTTTCCTGTATGCATTGGATGGAAGTGAC...GAGGCTCCAGTTTCCTGTATGCATTGGATGGAAGTGACAGTAGAAAGCAGTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505080.1
CDS-3UTR CCA 90 bp GTCCATCTCCTATGTCCTTTTGGCCATAATTACACACACAATAATGGCAAGCTATCGGAAAACGCAACATaGGGACGGCCCTGCAAGAGT +
Preference number: 4 (lower is better)
Translates to: VHLLCPFGHNYTHNNGKLSENAT*GRPCKS
Trigger: ACTCTTGCAGGGCCGTCCCCATGTTGCGTTTTCCGA...TAGCTTGCCATTATTGTGTGTGTAATTATGGCCAAAAGGACATAGGAGATGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS-3UTR CCA 90 bp TTTCTTTGTTACACAAAGGTGGTCCAAGACATCTTAGTCCATCTCCTATGTCCTTCGGAAAACGCAACATaGGGACGGCCCTGCAAGAGT +
Preference number: 4 (lower is better)
Translates to: FLCYTKVVQDILVHLLCPSENAT*GRPCKS
Trigger: ACTCTTGCAGGGCCGTCCCCATGTTGCGTTTTCCGA...AGGACATAGGAGATGGACTAAGATGTCTTGGACCACCTTTGTGTAACAAAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS-3UTR CCA 90 bp CTTTGTTACACAAAGGTGGTCCAAGACATCTTAGTCCATCTCCTATGTCCTTTTCACCACCCGGAAGGATaGGAAACAGGTCGGAAAACG +
Preference number: 4 (lower is better)
Translates to: LCYTKVVQDILVHLLCPFHHPEG*ETGRKT
Trigger: CGTTTTCCGACCTGTTTCCCATCCTTCCGGGTGGTG...AAAAGGACATAGGAGATGGACTAAGATGTCTTGGACCACCTTTGTGTAACAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS-3UTR TCA 90 bp GTCCAAGACATCTTAGTCCATCTCCTATGTCCTTTTGGCCATAATTACACACACCCTGCACAAACTTGGTaGGACGAGAATCCATCTGCA +
Preference number: 4 (lower is better)
Translates to: VQDILVHLLCPFGHNYTHPAQTW*DENPSA
Trigger: TGCAGATGGATTCTCGTCTCACCAAGTTTGTGCAGG...GTGTGTGTAATTATGGCCAAAAGGACATAGGAGATGGACTAAGATGTCTTGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS-3UTR TCA 90 bp TTTCTTTGTTACACAAAGGTGGTCCAAGACATCTTAGTCCATCTCCTATGTCCTCTCCTCCTCTTCATCTaGAGACTCATCGAGCTCCCA +
Preference number: 4 (lower is better)
Translates to: FLCYTKVVQDILVHLLCPLLLFI*RLIELP
Trigger: TGGGAGCTCGATGAGTCTTCAGATGAAGAGGAGGAG...AGGACATAGGAGATGGACTAAGATGTCTTGGACCACCTTTGTGTAACAAAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS-3UTR TCA 90 bp GTGGTCCAAGACATCTTAGTCCATCTCCTATGTCCTTTTGGCCATAATTACACATTGGTTCTCTGCCTCTaGCTCCGACAACACTTCTTC +
Preference number: 4 (lower is better)
Translates to: VVQDILVHLLCPFGHNYTLVLCL*LRQHFF
Trigger: GAAGAAGTGTTGTCGGAGTCAGAGGCAGAGAACCAA...TGTGTAATTATGGCCAAAAGGACATAGGAGATGGACTAAGATGTCTTGGACCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS-3UTR GCA 90 bp GTGGTCCAAGACATCTTAGTCCATCTCCTATGTCCTTTTGGCCATAATTACACAAGGAAAATAATCTCCTaGGGGAGCTGCTTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: VVQDILVHLLCPFGHNYTRKIIS*GSCFSP
Trigger: GGGAGAGAAGCAGCTCCCGCAGGAGATTATTTTCCT...TGTGTAATTATGGCCAAAAGGACATAGGAGATGGACTAAGATGTCTTGGACCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS-3UTR GCA 90 bp TGTTACACAAAGGTGGTCCAAGACATCTTAGTCCATCTCCTATGTCCTTTTGGCCAAAGGCCAAAAGTTTaGCATCTGGTCTCCATGCCA +
Preference number: 4 (lower is better)
Translates to: CYTKVVQDILVHLLCPFGQRPKV*HLVSMP
Trigger: TGGCATGGAGACCAGATGGCAAACTTTTGGCCTTTG...GCCAAAAGGACATAGGAGATGGACTAAGATGTCTTGGACCACCTTTGTGTAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS-3UTR TCA 90 bp GATGTGAGAACACTGCTTTCTACTGTCACTTCCATCCAATGCATACAGGAAACTAAACTTGCCAGTCGATaGAGTAAAACCTCGCCAGCT +
Preference number: 4 (lower is better)
Translates to: DVRTLLSTVTSIQCIQETKLASR*SKTSPA
Trigger: AGCTGGCGAGGTTTTACTTCATCGACTGGCAAGTTT...AGTTTCCTGTATGCATTGGATGGAAGTGACAGTAGAAAGCAGTGTTCTCACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505080.1
CDS-3UTR TCA 90 bp GTCCATCTCCTATGTCCTTTTGGCCATAATTACACACACAATAATGGCAAGCTACCTGCACAAACTTGGTaGGACGAGAATCCATCTGCA +
Preference number: 4 (lower is better)
Translates to: VHLLCPFGHNYTHNNGKLPAQTW*DENPSA
Trigger: TGCAGATGGATTCTCGTCTCACCAAGTTTGTGCAGG...TAGCTTGCCATTATTGTGTGTGTAATTATGGCCAAAAGGACATAGGAGATGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS-3UTR TCA 90 bp TGTTACACAAAGGTGGTCCAAGACATCTTAGTCCATCTCCTATGTCCTTTTGGCTTCTGTGTTAGGGGGTaGCACAAGATCATCATCTTC +
Preference number: 4 (lower is better)
Translates to: CYTKVVQDILVHLLCPFGFCVRG*HKIIIF
Trigger: GAAGATGATGATCTTGTGTCACCCCCTAACACAGAA...GCCAAAAGGACATAGGAGATGGACTAAGATGTCTTGGACCACCTTTGTGTAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS-3UTR GCA 90 bp GTCCAAGACATCTTAGTCCATCTCCTATGTCCTTTTGGCCATAATTACACACACGTCACTTCCATCCAATaGATACAGGAAACTGGAGCC +
Preference number: 4 (lower is better)
Translates to: VQDILVHLLCPFGHNYTHVTSIQ*IQETGA
Trigger: GGCTCCAGTTTCCTGTATGCATTGGATGGAAGTGAC...GTGTGTGTAATTATGGCCAAAAGGACATAGGAGATGGACTAAGATGTCTTGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS-3UTR GCA 90 bp TGTTACACAAAGGTGGTCCAAGACATCTTAGTCCATCTCCTATGTCCTTTTGGCCAGTGCTTCTCAAAATaGATGGTACGGGTGGGAATA +
Preference number: 4 (lower is better)
Translates to: CYTKVVQDILVHLLCPFGQCFSK*MVRVGI
Trigger: TATTCCCACCCGTACCATGCATTTTGAGAAGCACTG...GCCAAAAGGACATAGGAGATGGACTAAGATGTCTTGGACCACCTTTGTGTAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS-3UTR CCA 90 bp GTGGTCCAAGACATCTTAGTCCATCTCCTATGTCCTTTTGGCCATAATTACACACAAAAGTTTGCCATCTaGTCTCCATGCCAGACACGT +
Preference number: 4 (lower is better)
Translates to: VVQDILVHLLCPFGHNYTQKFAI*SPCQTR
Trigger: ACGTGTCTGGCATGGAGACCAGATGGCAAACTTTTG...TGTGTAATTATGGCCAAAAGGACATAGGAGATGGACTAAGATGTCTTGGACCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS-3UTR CCA 90 bp GTGGTCCAAGACATCTTAGTCCATCTCCTATGTCCTTTTGGCCATAATTACACAAGCTCGGGAAGCACATaGTCTTCTGTCATTCTCAAC +
Preference number: 4 (lower is better)
Translates to: VVQDILVHLLCPFGHNYTSSGST*SSVILN
Trigger: GTTGAGAATGACAGAAGACCATGTGCTTCCCGAGCT...TGTGTAATTATGGCCAAAAGGACATAGGAGATGGACTAAGATGTCTTGGACCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS-3UTR CCA 90 bp TTGTTACACAAAGGTGGTCCAAGACATCTTAGTCCATCTCCTATGTCCTTTTGGAGCTCGGGAAGCACATaGTCTTCTGTCATTCTCAAC +
Preference number: 4 (lower is better)
Translates to: LLHKGGPRHLSPSPMSFWSSGST*SSVILN
Trigger: GTTGAGAATGACAGAAGACCATGTGCTTCCCGAGCT...CCAAAAGGACATAGGAGATGGACTAAGATGTCTTGGACCACCTTTGTGTAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS-3UTR TCA 90 bp TTTCTTTGTTACACAAAGGTGGTCCAAGACATCTTAGTCCATCTCCTATGTCCTAAACTTGCCAGTCGATaGAGTAAAACCTCGCCAGCT +
Preference number: 4 (lower is better)
Translates to: FLCYTKVVQDILVHLLCPKLASR*SKTSPA
Trigger: AGCTGGCGAGGTTTTACTTCATCGACTGGCAAGTTT...AGGACATAGGAGATGGACTAAGATGTCTTGGACCACCTTTGTGTAACAAAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS-3UTR TCA 90 bp GTCCAAGACATCTTAGTCCATCTCCTATGTCCTTTTGGCCATAATTACACACACAGGTGGCTGCTATTTTaGAGAAAGTCATACCACTGG +
Preference number: 4 (lower is better)
Translates to: VQDILVHLLCPFGHNYTHRWLLF*RKSYHW
Trigger: CCAGTGGTATGACTTTCTTCAAAATAGCAGCCACCT...GTGTGTGTAATTATGGCCAAAAGGACATAGGAGATGGACTAAGATGTCTTGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS-3UTR GCA 90 bp GTCCATCTCCTATGTCCTTTTGGCCATAATTACACACACAATAATGGCAAGCTAGTCACTTCCATCCAATaGATACAGGAAACTGGAGCC +
Preference number: 4 (lower is better)
Translates to: VHLLCPFGHNYTHNNGKLVTSIQ*IQETGA
Trigger: GGCTCCAGTTTCCTGTATGCATTGGATGGAAGTGAC...TAGCTTGCCATTATTGTGTGTGTAATTATGGCCAAAAGGACATAGGAGATGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS-3UTR CCA 90 bp AAGGTGGTCCAAGACATCTTAGTCCATCTCCTATGTCCTTTTGGCCATAATTACGATGACTCTATAGACTaGCCAAGCTTTTTCAAGCCC +
Preference number: 4 (lower is better)
Translates to: KVVQDILVHLLCPFGHNYDDSID*PSFFKP
Trigger: GGGCTTGAAAAAGCTTGGCCAGTCTATAGAGTCATC...GTAATTATGGCCAAAAGGACATAGGAGATGGACTAAGATGTCTTGGACCACCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS-3UTR CCA 90 bp GTGGTCCAAGACATCTTAGTCCATCTCCTATGTCCTTTTGGCCATAATTACACAGATGACTCTATAGACTaGCCAAGCTTTTTCAAGCCC +
Preference number: 4 (lower is better)
Translates to: VVQDILVHLLCPFGHNYTDDSID*PSFFKP
Trigger: GGGCTTGAAAAAGCTTGGCCAGTCTATAGAGTCATC...TGTGTAATTATGGCCAAAAGGACATAGGAGATGGACTAAGATGTCTTGGACCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS-3UTR TCA 90 bp TACACAAAGGTGGTCCAAGACATCTTAGTCCATCTCCTATGTCCTTTTGGCCATAACAGAGCTGAAATATaGGTAAACTTTCTGGCCATC +
Preference number: 4 (lower is better)
Translates to: YTKVVQDILVHLLCPFGHNRAEI*VNFLAI
Trigger: GATGGCCAGAAAGTTTACTCATATTTCAGCTCTGTT...ATGGCCAAAAGGACATAGGAGATGGACTAAGATGTCTTGGACCACCTTTGTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS-3UTR TCA 90 bp TGTTACACAAAGGTGGTCCAAGACATCTTAGTCCATCTCCTATGTCCTTTTGGCAACAGAGCTGAAATATaGGTAAACTTTCTGGCCATC +
Preference number: 4 (lower is better)
Translates to: CYTKVVQDILVHLLCPFGNRAEI*VNFLAI
Trigger: GATGGCCAGAAAGTTTACTCATATTTCAGCTCTGTT...GCCAAAAGGACATAGGAGATGGACTAAGATGTCTTGGACCACCTTTGTGTAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS-3UTR TCA 90 bp TTGTTACACAAAGGTGGTCCAAGACATCTTAGTCCATCTCCTATGTCCTTTTGGGAACTCATCTTGCACTaGTGTGGTTGTGTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: LLHKGGPRHLSPSPMSFWELILH*CGCVLF
Trigger: GAAAAGAACACAACCACATCAGTGCAAGATGAGTTC...CCAAAAGGACATAGGAGATGGACTAAGATGTCTTGGACCACCTTTGTGTAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS-3UTR TCA 90 bp AAGGTGGTCCAAGACATCTTAGTCCATCTCCTATGTCCTTTTGGCCATAATTACTTCATCAAGAGAGTCTaGAGTTCAGCACTTGCTTTC +
Preference number: 4 (lower is better)
Translates to: KVVQDILVHLLCPFGHNYFIKRV*SSALAF
Trigger: GAAAGCAAGTGCTGAACTTCAGACTCTCTTGATGAA...GTAATTATGGCCAAAAGGACATAGGAGATGGACTAAGATGTCTTGGACCACCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS-3UTR TCA 90 bp TTTCTTTGTTACACAAAGGTGGTCCAAGACATCTTAGTCCATCTCCTATGTCCTTTCTGTGTTAGGGGGTaGCACAAGATCATCATCTTC +
Preference number: 4 (lower is better)
Translates to: FLCYTKVVQDILVHLLCPFCVRG*HKIIIF
Trigger: GAAGATGATGATCTTGTGTCACCCCCTAACACAGAA...AGGACATAGGAGATGGACTAAGATGTCTTGGACCACCTTTGTGTAACAAAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS-3UTR GCA 90 bp CAAGACATCTTAGTCCATCTCCTATGTCCTTTTGGCCATAATTACACACACAATCAAAGGCCAAAAGTTTaGCATCTGGTCTCCATGCCA +
Preference number: 4 (lower is better)
Translates to: QDILVHLLCPFGHNYTHNQRPKV*HLVSMP
Trigger: TGGCATGGAGACCAGATGGCAAACTTTTGGCCTTTG...ATTGTGTGTGTAATTATGGCCAAAAGGACATAGGAGATGGACTAAGATGTCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS-3UTR GCA 90 bp GTCCATCTCCTATGTCCTTTTGGCCATAATTACACACACAATAATGGCAAGCTACAGTGCTTCTCAAAATaGATGGTACGGGTGGGAATA +
Preference number: 4 (lower is better)
Translates to: VHLLCPFGHNYTHNNGKLQCFSK*MVRVGI
Trigger: TATTCCCACCCGTACCATGCATTTTGAGAAGCACTG...TAGCTTGCCATTATTGTGTGTGTAATTATGGCCAAAAGGACATAGGAGATGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS-3UTR CCA 90 bp CAAGACATCTTAGTCCATCTCCTATGTCCTTTTGGCCATAATTACACACACAATCAAAAGTTTGCCATCTaGTCTCCATGCCAGACACGT +
Preference number: 4 (lower is better)
Translates to: QDILVHLLCPFGHNYTHNQKFAI*SPCQTR
Trigger: ACGTGTCTGGCATGGAGACCAGATGGCAAACTTTTG...ATTGTGTGTGTAATTATGGCCAAAAGGACATAGGAGATGGACTAAGATGTCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS-3UTR CCA 90 bp TTGTTACACAAAGGTGGTCCAAGACATCTTAGTCCATCTCCTATGTCCTTTTGGCATCTTGCACTGATGTaGTTGTGTTCTTTTCCTGCA +
Preference number: 4 (lower is better)
Translates to: LLHKGGPRHLSPSPMSFWHLALM*LCSFPA
Trigger: TGCAGGAAAAGAACACAACCACATCAGTGCAAGATG...CCAAAAGGACATAGGAGATGGACTAAGATGTCTTGGACCACCTTTGTGTAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS-3UTR CCA 90 bp GTCCAAGACATCTTAGTCCATCTCCTATGTCCTTTTGGCCATAATTACACACACAGAAAGTCATACCACTaGTTTCCTTCTGTGTTAGGG +
Preference number: 4 (lower is better)
Translates to: VQDILVHLLCPFGHNYTHRKSYH*FPSVLG
Trigger: CCCTAACACAGAAGGAAACCAGTGGTATGACTTTCT...GTGTGTGTAATTATGGCCAAAAGGACATAGGAGATGGACTAAGATGTCTTGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS-3UTR CCA 90 bp TACACAAAGGTGGTCCAAGACATCTTAGTCCATCTCCTATGTCCTTTTGGCCATTCCAATTACATCTGCTaGCTTTTGCAAACACTGATC +
Preference number: 4 (lower is better)
Translates to: YTKVVQDILVHLLCPFGHSNYIC*LLQTLI
Trigger: GATCAGTGTTTGCAAAAGCCAGCAGATGTAATTGGA...ATGGCCAAAAGGACATAGGAGATGGACTAAGATGTCTTGGACCACCTTTGTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS-3UTR CCA 90 bp AAGGTGGTCCAAGACATCTTAGTCCATCTCCTATGTCCTTTTGGCCATAATTACAAAGACAAAGGCAGCTaGACCAAGAGTCTATCTCTT +
Preference number: 4 (lower is better)
Translates to: KVVQDILVHLLCPFGHNYKDKGS*TKSLSL
Trigger: AAGAGATAGACTCTTGGTCCAGCTGCCTTTGTCTTT...GTAATTATGGCCAAAAGGACATAGGAGATGGACTAAGATGTCTTGGACCACCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS-3UTR TCA 90 bp CTTTGTTACACAAAGGTGGTCCAAGACATCTTAGTCCATCTCCTATGTCCTTTTTTCATCAAGAGAGTCTaGAGTTCAGCACTTGCTTTC +
Preference number: 4 (lower is better)
Translates to: LCYTKVVQDILVHLLCPFFIKRV*SSALAF
Trigger: GAAAGCAAGTGCTGAACTTCAGACTCTCTTGATGAA...AAAAGGACATAGGAGATGGACTAAGATGTCTTGGACCACCTTTGTGTAACAAAG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS-3UTR TCA 90 bp CAAGACATCTTAGTCCATCTCCTATGTCCTTTTGGCCATAATTACACACACAATAGGTGGCTGCTATTTTaGAGAAAGTCATACCACTGG +
Preference number: 4 (lower is better)
Translates to: QDILVHLLCPFGHNYTHNRWLLF*RKSYHW
Trigger: CCAGTGGTATGACTTTCTTCAAAATAGCAGCCACCT...ATTGTGTGTGTAATTATGGCCAAAAGGACATAGGAGATGGACTAAGATGTCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS-3UTR GCA 90 bp TGTTACACAAAGGTGGTCCAAGACATCTTAGTCCATCTCCTATGTCCTTTTGGCAGACGAGAATCCATCTaGATTAGTATTTCTTCCCAT +
Preference number: 4 (lower is better)
Translates to: CYTKVVQDILVHLLCPFGRRESI*ISISSH
Trigger: ATGGGAAGAAATACTAATGCAGATGGATTCTCGTCT...GCCAAAAGGACATAGGAGATGGACTAAGATGTCTTGGACCACCTTTGTGTAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS-3UTR GCA 90 bp GTCCATCTCCTATGTCCTTTTGGCCATAATTACACACACAATAATGGCAAGCTAGTTGTGTTCTTTTCCTaGACAAACTTGGTGAGACGA +
Preference number: 4 (lower is better)
Translates to: VHLLCPFGHNYTHNNGKLVVFFS*TNLVRR
Trigger: TCGTCTCACCAAGTTTGTGCAGGAAAAGAACACAAC...TAGCTTGCCATTATTGTGTGTGTAATTATGGCCAAAAGGACATAGGAGATGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS-3UTR GCA 90 bp GTCCATCTCCTATGTCCTTTTGGCCATAATTACACACACAATAATGGCAAGCTACCCCATAATAGCAAGTaGATGAACTCATCTTGCACT +
Preference number: 4 (lower is better)
Translates to: VHLLCPFGHNYTHNNGKLPHNSK*MNSSCT
Trigger: AGTGCAAGATGAGTTCATGCACTTGCTATTATGGGG...TAGCTTGCCATTATTGTGTGTGTAATTATGGCCAAAAGGACATAGGAGATGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS-3UTR GCA 90 bp TTTCTTTGTTACACAAAGGTGGTCCAAGACATCTTAGTCCATCTCCTATGTCCTCCCCATAATAGCAAGTaGATGAACTCATCTTGCACT +
Preference number: 4 (lower is better)
Translates to: FLCYTKVVQDILVHLLCPPHNSK*MNSSCT
Trigger: AGTGCAAGATGAGTTCATGCACTTGCTATTATGGGG...AGGACATAGGAGATGGACTAAGATGTCTTGGACCACCTTTGTGTAACAAAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS-3UTR GCA 90 bp TGTTACACAAAGGTGGTCCAAGACATCTTAGTCCATCTCCTATGTCCTTTTGGCAGAGGTTCATATTTTTaGTTCCATGAAGCCATTCCT +
Preference number: 4 (lower is better)
Translates to: CYTKVVQDILVHLLCPFGRGSYF*FHEAIP
Trigger: AGGAATGGCTTCATGGAAGCAAAAATATGAACCTCT...GCCAAAAGGACATAGGAGATGGACTAAGATGTCTTGGACCACCTTTGTGTAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS-3UTR TCA 90 bp AAGGTGGTCCAAGACATCTTAGTCCATCTCCTATGTCCTTTTGGCCATAATTACGGCTTTTGCAAACACTaGTCAATAATATTCTCCATC +
Preference number: 4 (lower is better)
Translates to: KVVQDILVHLLCPFGHNYGFCKH*SIIFSI
Trigger: GATGGAGAATATTATTGATCAGTGTTTGCAAAAGCC...GTAATTATGGCCAAAAGGACATAGGAGATGGACTAAGATGTCTTGGACCACCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS-3UTR TCA 90 bp GTGGTCCAAGACATCTTAGTCCATCTCCTATGTCCTTTTGGCCATAATTACACAGGCTTTTGCAAACACTaGTCAATAATATTCTCCATC +
Preference number: 4 (lower is better)
Translates to: VVQDILVHLLCPFGHNYTGFCKH*SIIFSI
Trigger: GATGGAGAATATTATTGATCAGTGTTTGCAAAAGCC...TGTGTAATTATGGCCAAAAGGACATAGGAGATGGACTAAGATGTCTTGGACCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS-3UTR TCA 90 bp GTCCAAGACATCTTAGTCCATCTCCTATGTCCTTTTGGCCATAATTACACACACCCATTACTCACAGATTaGGAAATATCAGTATGTCTC +
Preference number: 4 (lower is better)
Translates to: VQDILVHLLCPFGHNYTHPLLTD*EISVCL
Trigger: GAGACATACTGATATTTCTCAATCTGTGAGTAATGG...GTGTGTGTAATTATGGCCAAAAGGACATAGGAGATGGACTAAGATGTCTTGGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS-3UTR TCA 90 bp GTCCATCTCCTATGTCCTTTTGGCCATAATTACACACACAATAATGGCAAGCTATGTAGATGCTTCTTCTaGCTTTTTCTGTTGTGGCAT +
Preference number: 4 (lower is better)
Translates to: VHLLCPFGHNYTHNNGKLCRCFF*LFLLWH
Trigger: ATGCCACAACAGAAAAAGTCAGAAGAAGCATCTACA...TAGCTTGCCATTATTGTGTGTGTAATTATGGCCAAAAGGACATAGGAGATGGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS-3UTR TCA 90 bp TTTCTTTGTTACACAAAGGTGGTCCAAGACATCTTAGTCCATCTCCTATGTCCTTGTAGATGCTTCTTCTaGCTTTTTCTGTTGTGGCAT +
Preference number: 4 (lower is better)
Translates to: FLCYTKVVQDILVHLLCPCRCFF*LFLLWH
Trigger: ATGCCACAACAGAAAAAGTCAGAAGAAGCATCTACA...AGGACATAGGAGATGGACTAAGATGTCTTGGACCACCTTTGTGTAACAAAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS-3UTR TCA 90 bp TTGTTACACAAAGGTGGTCCAAGACATCTTAGTCCATCTCCTATGTCCTTTTGGTCAAATACTCTCACATaGCGAAGATTTGAGCTTAAC +
Preference number: 4 (lower is better)
Translates to: LLHKGGPRHLSPSPMSFWSNTLT*RRFELN
Trigger: GTTAAGCTCAAATCTTCGTCATGTGAGAGTATTTGA...CCAAAAGGACATAGGAGATGGACTAAGATGTCTTGGACCACCTTTGTGTAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS-3UTR TCA 90 bp GTGGTCCAAGACATCTTAGTCCATCTCCTATGTCCTTTTGGCCATAATTACACATCAAATACTCTCACATaGCGAAGATTTGAGCTTAAC +
Preference number: 4 (lower is better)
Translates to: VVQDILVHLLCPFGHNYTSNTLT*RRFELN
Trigger: GTTAAGCTCAAATCTTCGTCATGTGAGAGTATTTGA...TGTGTAATTATGGCCAAAAGGACATAGGAGATGGACTAAGATGTCTTGGACCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS-3UTR GCA 90 bp CAAGACATCTTAGTCCATCTCCTATGTCCTTTTGGCCATAATTACACACACAATGTTGTGTTCTTTTCCTaGACAAACTTGGTGAGACGA +
Preference number: 4 (lower is better)
Translates to: QDILVHLLCPFGHNYTHNVVFFS*TNLVRR
Trigger: TCGTCTCACCAAGTTTGTGCAGGAAAAGAACACAAC...ATTGTGTGTGTAATTATGGCCAAAAGGACATAGGAGATGGACTAAGATGTCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS-3UTR GCA 90 bp GTGGTCCAAGACATCTTAGTCCATCTCCTATGTCCTTTTGGCCATAATTACACAAGAGGTTCATATTTTTaGTTCCATGAAGCCATTCCT +
Preference number: 4 (lower is better)
Translates to: VVQDILVHLLCPFGHNYTRGSYF*FHEAIP
Trigger: AGGAATGGCTTCATGGAAGCAAAAATATGAACCTCT...TGTGTAATTATGGCCAAAAGGACATAGGAGATGGACTAAGATGTCTTGGACCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS-3UTR CCA 90 bp TACACAAAGGTGGTCCAAGACATCTTAGTCCATCTCCTATGTCCTTTTGGCCATTGTATTTTCATTTGGTaGAAAACTCCAAACTCGATG +
Preference number: 4 (lower is better)
Translates to: YTKVVQDILVHLLCPFGHCIFIW*KTPNSM
Trigger: CATCGAGTTTGGAGTTTTCCACCAAATGAAAATACA...ATGGCCAAAAGGACATAGGAGATGGACTAAGATGTCTTGGACCACCTTTGTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS-3UTR CCA 90 bp GTGGTCCAAGACATCTTAGTCCATCTCCTATGTCCTTTTGGCCATAATTACACATCCTGTATTTTCATTTaGTGGAAAACTCCAAACTCG +
Preference number: 4 (lower is better)
Translates to: VVQDILVHLLCPFGHNYTSCIFI*WKTPNS
Trigger: CGAGTTTGGAGTTTTCCACCAAATGAAAATACAGGA...TGTGTAATTATGGCCAAAAGGACATAGGAGATGGACTAAGATGTCTTGGACCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS-3UTR CCA 90 bp TTGTTACACAAAGGTGGTCCAAGACATCTTAGTCCATCTCCTATGTCCTTTTGGTCGATTATAAAGGTCTaGAGCCTCATTGAAATGTTC +
Preference number: 4 (lower is better)
Translates to: LLHKGGPRHLSPSPMSFWSIIKV*SLIEMF
Trigger: GAACATTTCAATGAGGCTCCAGACCTTTATAATCGA...CCAAAAGGACATAGGAGATGGACTAAGATGTCTTGGACCACCTTTGTGTAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS-3UTR CCA 90 bp CAAGACATCTTAGTCCATCTCCTATGTCCTTTTGGCCATAATTACACACACAATAGAAAGTCATACCACTaGTTTCCTTCTGTGTTAGGG +
Preference number: 4 (lower is better)
Translates to: QDILVHLLCPFGHNYTHNRKSYH*FPSVLG
Trigger: CCCTAACACAGAAGGAAACCAGTGGTATGACTTTCT...ATTGTGTGTGTAATTATGGCCAAAAGGACATAGGAGATGGACTAAGATGTCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS-3UTR CCA 90 bp CAAGACATCTTAGTCCATCTCCTATGTCCTTTTGGCCATAATTACACACACAATAAAGACAAAGGCAGCTaGACCAAGAGTCTATCTCTT +
Preference number: 4 (lower is better)
Translates to: QDILVHLLCPFGHNYTHNKDKGS*TKSLSL
Trigger: AAGAGATAGACTCTTGGTCCAGCTGCCTTTGTCTTT...ATTGTGTGTGTAATTATGGCCAAAAGGACATAGGAGATGGACTAAGATGTCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS-3UTR TCA 90 bp TTTCTTTGTTACACAAAGGTGGTCCAAGACATCTTAGTCCATCTCCTATGTCCTAATGTGATATCTTTCTaGGTCATCTTATTCAGCTCG +
Preference number: 4 (lower is better)
Translates to: FLCYTKVVQDILVHLLCPNVISF*VILFSS
Trigger: CGAGCTGAATAAGATGACTCAGAAAGATATCACATT...AGGACATAGGAGATGGACTAAGATGTCTTGGACCACCTTTGTGTAACAAAGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315368.8
CDS-3UTR TCA 90 bp GTCCATCTCCTATGTCCTTTTGGCCATAATTACACACACAATAATGGCAAGCTATCATCTTTCAAGTACTaGCCAACTCTTTCAACGTTA +
Preference number: 4 (lower is better)
Translates to: VHLLCPFGHNYTHNNGKLSSFKY*PTLSTL
Trigger: TAACGTTGAAAGAGTTGGTCAGTACTTGAAAGATGA...TAGCTTGCCATTATTGTGTGTGTAATTATGGCCAAAAGGACATAGGAGATGGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS-3UTR TCA 90 bp GTCCATCTCCTATGTCCTTTTGGCCATAATTACACACACAATAATGGCAAGCTACCATTACTCACAGATTaGGAAATATCAGTATGTCTC +
Preference number: 4 (lower is better)
Translates to: VHLLCPFGHNYTHNNGKLPLLTD*EISVCL
Trigger: GAGACATACTGATATTTCTCAATCTGTGAGTAATGG...TAGCTTGCCATTATTGTGTGTGTAATTATGGCCAAAAGGACATAGGAGATGGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS-3UTR GCA 90 bp GTCCATCTCCTATGTCCTTTTGGCCATAATTACACACACAATAATGGCAAGCTAAGACGAGAATCCATCTaGATTAGTATTTCTTCCCAT +
Preference number: 4 (lower is better)
Translates to: VHLLCPFGHNYTHNNGKLRRESI*ISISSH
Trigger: ATGGGAAGAAATACTAATGCAGATGGATTCTCGTCT...TAGCTTGCCATTATTGTGTGTGTAATTATGGCCAAAAGGACATAGGAGATGGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS-3UTR GCA 90 bp GTCCAAGACATCTTAGTCCATCTCCTATGTCCTTTTGGCCATAATTACACACACCAATGGAATACAGATTaGTTGATTCATCGATTTTCC +
Preference number: 4 (lower is better)
Translates to: VQDILVHLLCPFGHNYTHQWNTD*LIHRFS
Trigger: GGAAAATCGATGAATCAAGCAATCTGTATTCCATTG...GTGTGTGTAATTATGGCCAAAAGGACATAGGAGATGGACTAAGATGTCTTGGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS-3UTR GCA 90 bp GTGGTCCAAGACATCTTAGTCCATCTCCTATGTCCTTTTGGCCATAATTACACACAATGGAATACAGATTaGTTGATTCATCGATTTTCC +
Preference number: 4 (lower is better)
Translates to: VVQDILVHLLCPFGHNYTQWNTD*LIHRFS
Trigger: GGAAAATCGATGAATCAAGCAATCTGTATTCCATTG...TGTGTAATTATGGCCAAAAGGACATAGGAGATGGACTAAGATGTCTTGGACCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS-3UTR CCA 90 bp GTCCAAGACATCTTAGTCCATCTCCTATGTCCTTTTGGCCATAATTACACACACTGTATTTTCATTTGGTaGAAAACTCCAAACTCGATG +
Preference number: 4 (lower is better)
Translates to: VQDILVHLLCPFGHNYTHCIFIW*KTPNSM
Trigger: CATCGAGTTTGGAGTTTTCCACCAAATGAAAATACA...GTGTGTGTAATTATGGCCAAAAGGACATAGGAGATGGACTAAGATGTCTTGGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS-3UTR CCA 90 bp TTTCTTTGTTACACAAAGGTGGTCCAAGACATCTTAGTCCATCTCCTATGTCCTTCCTGTATTTTCATTTaGTGGAAAACTCCAAACTCG +
Preference number: 4 (lower is better)
Translates to: FLCYTKVVQDILVHLLCPSCIFI*WKTPNS
Trigger: CGAGTTTGGAGTTTTCCACCAAATGAAAATACAGGA...AGGACATAGGAGATGGACTAAGATGTCTTGGACCACCTTTGTGTAACAAAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS-3UTR CCA 90 bp AATGATGTGAGAACACTGCTTTCTACTGTCACTTCCATCCAATGCATACAGGAATCCTGTATTTTCATTTaGTGGAAAACTCCAAACTCG +
Preference number: 4 (lower is better)
Translates to: NDVRTLLSTVTSIQCIQESCIFI*WKTPNS
Trigger: CGAGTTTGGAGTTTTCCACCAAATGAAAATACAGGA...TTCCTGTATGCATTGGATGGAAGTGACAGTAGAAAGCAGTGTTCTCACATCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505080.1
CDS-3UTR CCA 90 bp CAAGACATCTTAGTCCATCTCCTATGTCCTTTTGGCCATAATTACACACACAATTCCAATTACATCTGCTaGCTTTTGCAAACACTGATC +
Preference number: 4 (lower is better)
Translates to: QDILVHLLCPFGHNYTHNSNYIC*LLQTLI
Trigger: GATCAGTGTTTGCAAAAGCCAGCAGATGTAATTGGA...ATTGTGTGTGTAATTATGGCCAAAAGGACATAGGAGATGGACTAAGATGTCTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS-3UTR CCA 90 bp AATGATGTGAGAACACTGCTTTCTACTGTCACTTCCATCCAATGCATACAGGAATGTATTTTCATTTGGTaGAAAACTCCAAACTCGATG +
Preference number: 4 (lower is better)
Translates to: NDVRTLLSTVTSIQCIQECIFIW*KTPNSM
Trigger: CATCGAGTTTGGAGTTTTCCACCAAATGAAAATACA...TTCCTGTATGCATTGGATGGAAGTGACAGTAGAAAGCAGTGTTCTCACATCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505080.1
CDS-3UTR CCA 90 bp CAAGACATCTTAGTCCATCTCCTATGTCCTTTTGGCCATAATTACACACACAATTCGATTATAAAGGTCTaGAGCCTCATTGAAATGTTC +
Preference number: 4 (lower is better)
Translates to: QDILVHLLCPFGHNYTHNSIIKV*SLIEMF
Trigger: GAACATTTCAATGAGGCTCCAGACCTTTATAATCGA...ATTGTGTGTGTAATTATGGCCAAAAGGACATAGGAGATGGACTAAGATGTCTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS CCA 90 bp CTCCCACCACCCGGAAGGATGGGAAACAGGTCGGAAAACGCAACATaGGGACGGCCCTGCAACGACACCCCAGTCAGAGGCCGGCAGGAG +
Preference number: 5 (lower is better)
Translates to: LPPPGRMGNRSENAT*GRPCNDTPVRGRQE
Trigger: CTCCTGCCGGCCTCTGACTGGGGTGTCGTTGCAGGGCCGTCCCCATGTTGCGTTTTCCGACCTGTTTCCCATCCTTCCGGGTGGTGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505991.1
ENST00000507809.1
CDS CCA 90 bp AATAATCTCCTGCGGGAGCTGCTTCTCTCCCACCACCCGGAAGGATaGGAAACAGGTCGGAAAACGCAACATGGGGACGGCCCTGCAACG +
Preference number: 5 (lower is better)
Translates to: NNLLRELLLSHHPEG*ETGRKTQHGDGPAT
Trigger: CGTTGCAGGGCCGTCCCCATGTTGCGTTTTCCGACCTGTTTCCCATCCTTCCGGGTGGTGGGAGAGAAGCAGCTCCCGCAGGAGATTATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505991.1
ENST00000507809.1
CDS GCA 90 bp TCCCGCTTGGGCGACCAGACCAGGAAAATAATCTCCTGCGGGAGCTaGTTCTCTCCCACCACCCGGAAGGATGGGAAACAGGTCGGAAAA +
Preference number: 5 (lower is better)
Translates to: SRLGDQTRKIISCGS*FSPTTRKDGKQVGK
Trigger: TTTTCCGACCTGTTTCCCATCCTTCCGGGTGGTGGGAGAGAAGCAGCTCCCGCAGGAGATTATTTTCCTGGTCTGGTCGCCCAAGCGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315368.8
ENST00000505080.1
ENST00000505991.1
ENST00000507809.1
ENST00000510092.5
CDS GCA 90 bp GCAATGAGATCCCGCTTGGGCGACCAGACCAGGAAAATAATCTCCTaGGGGAGCTGCTTCTCTCCCACCACCCGGAAGGATGGGAAACAG +
Preference number: 5 (lower is better)
Translates to: AMRSRLGDQTRKIIS*GSCFSPTTRKDGKQ
Trigger: CTGTTTCCCATCCTTCCGGGTGGTGGGAGAGAAGCAGCTCCCGCAGGAGATTATTTTCCTGGTCTGGTCGCCCAAGCGGGATCTCATTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315368.8
ENST00000505080.1
ENST00000505991.1
ENST00000507809.1
ENST00000510092.5
CDS CCA 90 bp AATAATCTCCTGCGGGAGCTGCTTCTCTCCCACCACCCGGAAGGATaGGAAACAGGTCGGAAAACGCAACATGGGGACGGCCCTGCAAGA +
Preference number: 5 (lower is better)
Translates to: NNLLRELLLSHHPEG*ETGRKTQHGDGPAR
Trigger: TCTTGCAGGGCCGTCCCCATGTTGCGTTTTCCGACCTGTTTCCCATCCTTCCGGGTGGTGGGAGAGAAGCAGCTCCCGCAGGAGATTATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315368.8
ENST00000505080.1
ENST00000510092.5
CDS-3UTR CAA 90 bp AGAACACTGCTTTCTACTGTCACTTCCATCCAATGCATACAGGAAACTGGAGCCGCAATGAGATCCCGCTaGGGCGACCAGACCAGGAAA +
Preference number: 5 (lower is better)
Translates to: RTLLSTVTSIQCIQETGAAMRSR*GDQTRK
Trigger: TTTCCTGGTCTGGTCGCCCAAGCGGGATCTCATTGC...GGCTCCAGTTTCCTGTATGCATTGGATGGAAGTGACAGTAGAAAGCAGTGTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505080.1
CDS CCA 90 bp TTTTTGGTCGTAACAAGAACTTCAGCCCTGCAGGCCATCTGCCCATaGGAACCACATTACTTTCTTTGTCAACAGGGAGCTCAGGAGTAT +
Preference number: 5 (lower is better)
Translates to: FLVVTRTSALQAICP*EPHYFLCQQGAQEY
Trigger: ATACTCCTGAGCTCCCTGTTGACAAAGAAAGTAATGTGGTTCCCATGGGCAGATGGCCTGCAGGGCTGAAGTTCTTGTTACGACCAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000504256.5
ENST00000506973.1
CDS-3UTR CAA 90 bp CTTTGTTACACAAAGGTGGTCCAAGACATCTTAGTCCATCTCCTATGTCCTTTTGCAATGAGATCCCGCTaGGGCGACCAGACCAGGAAA +
Preference number: 5 (lower is better)
Translates to: LCYTKVVQDILVHLLCPFAMRSR*GDQTRK
Trigger: TTTCCTGGTCTGGTCGCCCAAGCGGGATCTCATTGC...AAAAGGACATAGGAGATGGACTAAGATGTCTTGGACCACCTTTGTGTAACAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS-3UTR CAA 90 bp TGTTACACAAAGGTGGTCCAAGACATCTTAGTCCATCTCCTATGTCCTTTTGGCGCAAAGGCCAAAAGTTaGCCATCTGGTCTCCATGCC +
Preference number: 5 (lower is better)
Translates to: CYTKVVQDILVHLLCPFGAKAKS*PSGLHA
Trigger: GGCATGGAGACCAGATGGCAAACTTTTGGCCTTTGC...GCCAAAAGGACATAGGAGATGGACTAAGATGTCTTGGACCACCTTTGTGTAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS-3UTR CAA 90 bp CAAGACATCTTAGTCCATCTCCTATGTCCTTTTGGCCATAATTACACACACAATGCAATGAGATCCCGCTaGGGCGACCAGACCAGGAAA +
Preference number: 5 (lower is better)
Translates to: QDILVHLLCPFGHNYTHNAMRSR*GDQTRK
Trigger: TTTCCTGGTCTGGTCGCCCAAGCGGGATCTCATTGC...ATTGTGTGTGTAATTATGGCCAAAAGGACATAGGAGATGGACTAAGATGTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS-3UTR CAA 90 bp GTCCATCTCCTATGTCCTTTTGGCCATAATTACACACACAATAATGGCAAGCTAACCTCGCCAGCTGTGTaGGCCAAAGCAATGAGATCC +
Preference number: 5 (lower is better)
Translates to: VHLLCPFGHNYTHNNGKLTSPAV*AKAMRS
Trigger: GGATCTCATTGCTTTGGCCAACACAGCTGGCGAGGT...TAGCTTGCCATTATTGTGTGTGTAATTATGGCCAAAAGGACATAGGAGATGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS-3UTR CAA 90 bp AATGATGTGAGAACACTGCTTTCTACTGTCACTTCCATCCAATGCATACAGGAAACCTCGCCAGCTGTGTaGGCCAAAGCAATGAGATCC +
Preference number: 5 (lower is better)
Translates to: NDVRTLLSTVTSIQCIQETSPAV*AKAMRS
Trigger: GGATCTCATTGCTTTGGCCAACACAGCTGGCGAGGT...TTCCTGTATGCATTGGATGGAAGTGACAGTAGAAAGCAGTGTTCTCACATCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505080.1
CDS-3UTR CAA 90 bp CTTTGTTACACAAAGGTGGTCCAAGACATCTTAGTCCATCTCCTATGTCCTTTTGCAAAGGCCAAAAGTTaGCCATCTGGTCTCCATGCC +
Preference number: 5 (lower is better)
Translates to: LCYTKVVQDILVHLLCPFAKAKS*PSGLHA
Trigger: GGCATGGAGACCAGATGGCAAACTTTTGGCCTTTGC...AAAAGGACATAGGAGATGGACTAAGATGTCTTGGACCACCTTTGTGTAACAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS GCA 90 bp TTCCCAGCAACATACTGTGCTTTCATACTTTCCAGTAATCTCCAGTaGTTCTCAAAATGCATGGTACGGGTGGGAATAGCACTACACTGT +
Preference number: 5 (lower is better)
Translates to: FPATYCAFILSSNLQ*FSKCMVRVGIALHC
Trigger: ACAGTGTAGTGCTATTCCCACCCGTACCATGCATTTTGAGAAGCACTGGAGATTACTGGAAAGTATGAAAGCACAGTATGTTGCTGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315368.8
ENST00000504256.5
ENST00000506973.1
ENST00000510092.5
ENST00000515848.1
CDS CCA 90 bp ACTTTAATGACTATCTCTGGAGCTAAAGCGGCAGCACCAGCTTGTTaGTTCTCTGCCTCTGACTCCGACAACACTTCTTCCTTTATTTTT +
Preference number: 5 (lower is better)
Translates to: TLMTISGAKAAAPAC*FSASDSDNTSSFIF
Trigger: AAAAATAAAGGAAGAAGTGTTGTCGGAGTCAGAGGCAGAGAACCAACAAGCTGGTGCTGCCGCTTTAGCTCCAGAGATAGTCATTAAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315368.8
ENST00000504256.5
ENST00000506973.1
ENST00000510092.5
CDS-3UTR CAA 90 bp TACACAAAGGTGGTCCAAGACATCTTAGTCCATCTCCTATGTCCTTTTGGCCATTTTTCCTGCACAAACTaGGTGAGACGAGAATCCATC +
Preference number: 5 (lower is better)
Translates to: YTKVVQDILVHLLCPFGHFSCTN*VRRESI
Trigger: GATGGATTCTCGTCTCACCAAGTTTGTGCAGGAAAA...ATGGCCAAAAGGACATAGGAGATGGACTAAGATGTCTTGGACCACCTTTGTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS-3UTR CAA 90 bp TGTTACACAAAGGTGGTCCAAGACATCTTAGTCCATCTCCTATGTCCTTTTGGCTCTGAAGTTCAGCACTaGCTTTCCCCCATAATAGCA +
Preference number: 5 (lower is better)
Translates to: CYTKVVQDILVHLLCPFGSEVQH*LSPIIA
Trigger: TGCTATTATGGGGGAAAGCAAGTGCTGAACTTCAGA...GCCAAAAGGACATAGGAGATGGACTAAGATGTCTTGGACCACCTTTGTGTAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS GCA 90 bp TACTGTGCTTTCATACTTTCCAGTAATCTCCAGTGCTTCTCAAAATaGATGGTACGGGTGGGAATAGCACTACACTGTTCATCTAGCCTT +
Preference number: 5 (lower is better)
Translates to: YCAFILSSNLQCFSK*MVRVGIALHCSSSL
Trigger: AAGGCTAGATGAACAGTGTAGTGCTATTCCCACCCGTACCATGCATTTTGAGAAGCACTGGAGATTACTGGAAAGTATGAAAGCACAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315368.8
ENST00000506973.1
ENST00000510092.5
ENST00000515848.1
CDS GCA 90 bp TACTGTGCTTTCATACTTTCCAGTAATCTCCAGTGCTTCTCAAAATaGATGGTACGGGTGGGAATAGCACTACACTGTTCATCTAGCCTA +
Preference number: 5 (lower is better)
Translates to: YCAFILSSNLQCFSK*MVRVGIALHCSSSL
Trigger: TAGGCTAGATGAACAGTGTAGTGCTATTCCCACCCGTACCATGCATTTTGAGAAGCACTGGAGATTACTGGAAAGTATGAAAGCACAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504256.5
CDS-3UTR CAA 90 bp TGCTTTCTACTGTCACTTCCATCCAATGCATACAGGAAACTGGAGCCTCCACAGCACAAAACAATTTTCTaGGTATCAGCAAGAGCAAAG +
Preference number: 5 (lower is better)
Translates to: CFLLSLPSNAYRKLEPPQHKTIF*VSARAK
Trigger: CTTTGCTCTTGCTGATACCAAGAAAATTGTTTTGTG...CTGTGGAGGCTCCAGTTTCCTGTATGCATTGGATGGAAGTGACAGTAGAAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505080.1
CDS-3UTR CAA 90 bp GTGGTCCAAGACATCTTAGTCCATCTCCTATGTCCTTTTGGCCATAATTACACACTGTCATTCTCAACATaGCCACATAAAGCCACCGAA +
Preference number: 5 (lower is better)
Translates to: VVQDILVHLLCPFGHNYTLSFST*PHKATE
Trigger: TTCGGTGGCTTTATGTGGCAATGTTGAGAATGACAG...TGTGTAATTATGGCCAAAAGGACATAGGAGATGGACTAAGATGTCTTGGACCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS-3UTR CAA 90 bp TACACAAAGGTGGTCCAAGACATCTTAGTCCATCTCCTATGTCCTTTTGGCCATAAGGTGGCTGCTATTTaGAAGAAAGTCATACCACTG +
Preference number: 5 (lower is better)
Translates to: YTKVVQDILVHLLCPFGHKVAAI*KKVIPL
Trigger: CAGTGGTATGACTTTCTTCAAAATAGCAGCCACCTT...ATGGCCAAAAGGACATAGGAGATGGACTAAGATGTCTTGGACCACCTTTGTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS-3UTR CAA 90 bp AACACTGCTTTCTACTGTCACTTCCATCCAATGCATACAGGAAACTGGAGCCTCTTCCTGTATTTTCATTaGGTGGAAAACTCCAAACTC +
Preference number: 5 (lower is better)
Translates to: NTAFYCHFHPMHTGNWSLFLYFH*VENSKL
Trigger: GAGTTTGGAGTTTTCCACCAAATGAAAATACAGGAA...GAGGCTCCAGTTTCCTGTATGCATTGGATGGAAGTGACAGTAGAAAGCAGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505080.1
CDS-3UTR CAA 90 bp GTCCATCTCCTATGTCCTTTTGGCCATAATTACACACACAATAATGGCAAGCTACTGTCATTCTCAACATaGCCACATAAAGCCACCGAA +
Preference number: 5 (lower is better)
Translates to: VHLLCPFGHNYTHNNGKLLSFST*PHKATE
Trigger: TTCGGTGGCTTTATGTGGCAATGTTGAGAATGACAG...TAGCTTGCCATTATTGTGTGTGTAATTATGGCCAAAAGGACATAGGAGATGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS GCA 90 bp GTTGTGTTCTTTTCCTGCACAAACTTGGTGAGACGAGAATCCATCTaGATTAGTATTTCTTCCCATGCTTCACACATACATGTTAGTGAC +
Preference number: 5 (lower is better)
Translates to: VVFFSCTNLVRRESI*ISISSHASHIHVSD
Trigger: GTCACTAACATGTATGTGTGAAGCATGGGAAGAAATACTAATGCAGATGGATTCTCGTCTCACCAAGTTTGTGCAGGAAAAGAACACAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS-3UTR CAA 90 bp TGTTACACAAAGGTGGTCCAAGACATCTTAGTCCATCTCCTATGTCCTTTTGGCAAACTCGATGAAAACTaGCCAGTCGATGAAGTAAAA +
Preference number: 5 (lower is better)
Translates to: CYTKVVQDILVHLLCPFGKLDEN*PVDEVK
Trigger: TTTTACTTCATCGACTGGCAAGTTTTCATCGAGTTT...GCCAAAAGGACATAGGAGATGGACTAAGATGTCTTGGACCACCTTTGTGTAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS-3UTR CAA 90 bp TACACAAAGGTGGTCCAAGACATCTTAGTCCATCTCCTATGTCCTTTTGGCCATCACAAAACAATTTTCTaGGTATCAGCAAGAGCAAAG +
Preference number: 5 (lower is better)
Translates to: YTKVVQDILVHLLCPFGHHKTIF*VSARAK
Trigger: CTTTGCTCTTGCTGATACCAAGAAAATTGTTTTGTG...ATGGCCAAAAGGACATAGGAGATGGACTAAGATGTCTTGGACCACCTTTGTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS-3UTR CAA 90 bp CAAGACATCTTAGTCCATCTCCTATGTCCTTTTGGCCATAATTACACACACAATTTTTCCTGCACAAACTaGGTGAGACGAGAATCCATC +
Preference number: 5 (lower is better)
Translates to: QDILVHLLCPFGHNYTHNFSCTN*VRRESI
Trigger: GATGGATTCTCGTCTCACCAAGTTTGTGCAGGAAAA...ATTGTGTGTGTAATTATGGCCAAAAGGACATAGGAGATGGACTAAGATGTCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS-3UTR CAA 90 bp CAAGACATCTTAGTCCATCTCCTATGTCCTTTTGGCCATAATTACACACACAATTCTGAAGTTCAGCACTaGCTTTCCCCCATAATAGCA +
Preference number: 5 (lower is better)
Translates to: QDILVHLLCPFGHNYTHNSEVQH*LSPIIA
Trigger: TGCTATTATGGGGGAAAGCAAGTGCTGAACTTCAGA...ATTGTGTGTGTAATTATGGCCAAAAGGACATAGGAGATGGACTAAGATGTCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS-3UTR CAA 90 bp CTTTGTTACACAAAGGTGGTCCAAGACATCTTAGTCCATCTCCTATGTCCTTTTAAGGTGGCTGCTATTTaGAAGAAAGTCATACCACTG +
Preference number: 5 (lower is better)
Translates to: LCYTKVVQDILVHLLCPFKVAAI*KKVIPL
Trigger: CAGTGGTATGACTTTCTTCAAAATAGCAGCCACCTT...AAAAGGACATAGGAGATGGACTAAGATGTCTTGGACCACCTTTGTGTAACAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS-3UTR CAA 90 bp TGTTACACAAAGGTGGTCCAAGACATCTTAGTCCATCTCCTATGTCCTTTTGGCTACATCTGCTGGCTTTaGCAAACACTGATCAATAAT +
Preference number: 5 (lower is better)
Translates to: CYTKVVQDILVHLLCPFGYICWL*QTLINN
Trigger: ATTATTGATCAGTGTTTGCAAAAGCCAGCAGATGTA...GCCAAAAGGACATAGGAGATGGACTAAGATGTCTTGGACCACCTTTGTGTAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS-3UTR CAA 90 bp TACACAAAGGTGGTCCAAGACATCTTAGTCCATCTCCTATGTCCTTTTGGCCATTACATCTGCTGGCTTTaGCAAACACTGATCAATAAT +
Preference number: 5 (lower is better)
Translates to: YTKVVQDILVHLLCPFGHYICWL*QTLINN
Trigger: ATTATTGATCAGTGTTTGCAAAAGCCAGCAGATGTA...ATGGCCAAAAGGACATAGGAGATGGACTAAGATGTCTTGGACCACCTTTGTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS-3UTR CAA 90 bp GTCCATCTCCTATGTCCTTTTGGCCATAATTACACACACAATAATGGCAAGCTATCACATGACGAAGATTaGAGCTTAACACACAGGACA +
Preference number: 5 (lower is better)
Translates to: VHLLCPFGHNYTHNNGKLSHDED*SLTHRT
Trigger: TGTCCTGTGTGTTAAGCTCAAATCTTCGTCATGTGA...TAGCTTGCCATTATTGTGTGTGTAATTATGGCCAAAAGGACATAGGAGATGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS-3UTR CAA 90 bp TTTCTTTGTTACACAAAGGTGGTCCAAGACATCTTAGTCCATCTCCTATGTCCTTCACATGACGAAGATTaGAGCTTAACACACAGGACA +
Preference number: 5 (lower is better)
Translates to: FLCYTKVVQDILVHLLCPSHDED*SLTHRT
Trigger: TGTCCTGTGTGTTAAGCTCAAATCTTCGTCATGTGA...AGGACATAGGAGATGGACTAAGATGTCTTGGACCACCTTTGTGTAACAAAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS-3UTR CAA 90 bp TTGTTACACAAAGGTGGTCCAAGACATCTTAGTCCATCTCCTATGTCCTTTTGGATCTCCTATGTCCTTTaGGCCATAATTACACACACA +
Preference number: 5 (lower is better)
Translates to: LLHKGGPRHLSPSPMSFWISYVL*AIITHT
Trigger: TGTGTGTGTAATTATGGCCAAAAGGACATAGGAGAT...CCAAAAGGACATAGGAGATGGACTAAGATGTCTTGGACCACCTTTGTGTAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS CCA 90 bp TATTCTGCAGAATCTTCACTGTTATATACTAAAGACAAAGGCAGCTaGACCAAGAGTCTATCTCTTCCTTCACGTCCTACAGTGTCTTTA +
Preference number: 5 (lower is better)
Translates to: YSAESSLLYTKDKGS*TKSLSLPSRPTVSL
Trigger: TAAAGACACTGTAGGACGTGAAGGAAGAGATAGACTCTTGGTCCAGCTGCCTTTGTCTTTAGTATATAACAGTGAAGATTCTGCAGAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315368.8
ENST00000504256.5
ENST00000506973.1
ENST00000510092.5
ENST00000515848.1
CDS-3UTR CAA 90 bp GATGTGAGAACACTGCTTTCTACTGTCACTTCCATCCAATGCATACAGGAAACTAAACTCGATGAAAACTaGCCAGTCGATGAAGTAAAA +
Preference number: 5 (lower is better)
Translates to: DVRTLLSTVTSIQCIQETKLDEN*PVDEVK
Trigger: TTTTACTTCATCGACTGGCAAGTTTTCATCGAGTTT...AGTTTCCTGTATGCATTGGATGGAAGTGACAGTAGAAAGCAGTGTTCTCACATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505080.1
CDS-3UTR CAA 90 bp TTGTTACACAAAGGTGGTCCAAGACATCTTAGTCCATCTCCTATGTCCTTTTGGAAACTCGATGAAAACTaGCCAGTCGATGAAGTAAAA +
Preference number: 5 (lower is better)
Translates to: LLHKGGPRHLSPSPMSFWKLDEN*PVDEVK
Trigger: TTTTACTTCATCGACTGGCAAGTTTTCATCGAGTTT...CCAAAAGGACATAGGAGATGGACTAAGATGTCTTGGACCACCTTTGTGTAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS GCA 90 bp GCTTCTTCGATTCCTGCAGCATCTAGTCCAAGAGGTTCATATTTTTaGTTCCATGAAGCCATTCCTTTCAATTCACTCAAATGGTATAAT +
Preference number: 5 (lower is better)
Translates to: ASSIPAASSPRGSYF*FHEAIPFNSLKWYN
Trigger: ATTATACCATTTGAGTGAATTGAAAGGAATGGCTTCATGGAAGCAAAAATATGAACCTCTTGGACTAGATGCTGCAGGAATCGAAGAAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315368.8
ENST00000503805.5
ENST00000510092.5
CDS GCA 90 bp ACACTATTGCTCCTACACAAAGACATGCATTTCTTTCAAACTTACTaGTGGCTTTTGCAAACACTGATCAATAATATTCTCCATCCGCCT +
Preference number: 5 (lower is better)
Translates to: TLLLLHKDMHFFQTY*WLLQTLINNILHPP
Trigger: AGGCGGATGGAGAATATTATTGATCAGTGTTTGCAAAAGCCAGCAGTAAGTTTGAAAGAAATGCATGTCTTTGTGTAGGAGCAATAGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504256.5
ENST00000505842.5
ENST00000515848.1
CDS-3UTR CAA 90 bp CTTTGTTACACAAAGGTGGTCCAAGACATCTTAGTCCATCTCCTATGTCCTTTTTTCCTGTATTTTCATTaGGTGGAAAACTCCAAACTC +
Preference number: 5 (lower is better)
Translates to: LCYTKVVQDILVHLLCPFFLYFH*VENSKL
Trigger: GAGTTTGGAGTTTTCCACCAAATGAAAATACAGGAA...AAAAGGACATAGGAGATGGACTAAGATGTCTTGGACCACCTTTGTGTAACAAAG
39% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS-3UTR CAA 90 bp TTTCTTTGTTACACAAAGGTGGTCCAAGACATCTTAGTCCATCTCCTATGTCCTCACAAAACAATTTTCTaGGTATCAGCAAGAGCAAAG +
Preference number: 5 (lower is better)
Translates to: FLCYTKVVQDILVHLLCPHKTIF*VSARAK
Trigger: CTTTGCTCTTGCTGATACCAAGAAAATTGTTTTGTG...AGGACATAGGAGATGGACTAAGATGTCTTGGACCACCTTTGTGTAACAAAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS TCA 90 bp GAATCCTCACTTCTGGTATCTCTATACAATGGAATACAGATTGCTTaGTTCATCGATTTTCCAATTACATCTGCTGGCTTTTGCAAACAC +
Preference number: 5 (lower is better)
Translates to: ESSLLVSLYNGIQIA*FIDFPITSAGFCKH
Trigger: GTGTTTGCAAAAGCCAGCAGATGTAATTGGAAAATCGATGAATCAAGCAATCTGTATTCCATTGTATAGAGATACCAGAAGTGAGGATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS TCA 90 bp ATCTGCTTACTTAAGTCTCAGTCAATTAAAGCCATCTCTTGGAATTaGCAGTATACTTCCTACATGGGTACTGAGGTCTTAATTCTGGAA +
Preference number: 5 (lower is better)
Translates to: ICLLKSQSIKAISWN*QYTSYMGTEVLILE
Trigger: TTCCAGAATTAAGACCTCAGTACCCATGTAGGAAGTATACTGTCAATTCCAAGAGATGGCTTTAATTGACTGAGACTTAAGTAAGCAGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504256.5
CDS-3UTR CAA 90 bp CAAGACATCTTAGTCCATCTCCTATGTCCTTTTGGCCATAATTACACACACAATTTCCTGTATTTTCATTaGGTGGAAAACTCCAAACTC +
Preference number: 5 (lower is better)
Translates to: QDILVHLLCPFGHNYTHNFLYFH*VENSKL
Trigger: GAGTTTGGAGTTTTCCACCAAATGAAAATACAGGAA...ATTGTGTGTGTAATTATGGCCAAAAGGACATAGGAGATGGACTAAGATGTCTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS CCA 72 bp CCCGGAAGGATGGGAAACAGGTCGGAAAACGCAACATaGGGACGGCCCTGCAACGACACCCCAGTCAGAGGC +
Preference number: 6 (lower is better)
Translates to: PGRMGNRSENAT*GRPCNDTPVRG
Trigger: GCCTCTGACTGGGGTGTCGTTGCAGGGCCGTCCCCATGTTGCGTTTTCCGACCTGTTTCCCATCCTTCCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505991.1
ENST00000507809.1
CDS GCA 72 bp TCCCGCTTGGGCGACCAGACCAGGAAAATAATCTCCTaGGGGAGCTGCTTCTCTCCCACCACCCGGAAGGAT +
Preference number: 6 (lower is better)
Translates to: SRLGDQTRKIIS*GSCFSPTTRKD
Trigger: ATCCTTCCGGGTGGTGGGAGAGAAGCAGCTCCCGCAGGAGATTATTTTCCTGGTCTGGTCGCCCAAGCGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315368.8
ENST00000505080.1
ENST00000505991.1
ENST00000507809.1
ENST00000510092.5
CDS GCA 72 bp GGCGACCAGACCAGGAAAATAATCTCCTGCGGGAGCTaGTTCTCTCCCACCACCCGGAAGGATGGGAAACAG +
Preference number: 6 (lower is better)
Translates to: GDQTRKIISCGS*FSPTTRKDGKQ
Trigger: CTGTTTCCCATCCTTCCGGGTGGTGGGAGAGAAGCAGCTCCCGCAGGAGATTATTTTCCTGGTCTGGTCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315368.8
ENST00000505080.1
ENST00000505991.1
ENST00000507809.1
ENST00000510092.5
CDS CAA 72 bp TCGCCAGCTGTGTTGGCCAAAGCAATGAGATCCCGCTaGGGCGACCAGACCAGGAAAATAATCTCCTGCGGG +
Preference number: 6 (lower is better)
Translates to: SPAVLAKAMRSR*GDQTRKIISCG
Trigger: CCCGCAGGAGATTATTTTCCTGGTCTGGTCGCCCAAGCGGGATCTCATTGCTTTGGCCAACACAGCTGGCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315368.8
ENST00000505080.1
ENST00000505991.1
ENST00000507809.1
ENST00000510092.5
CDS CAA 90 bp AGTAAAACCTCGCCAGCTGTGTTGGCCAAAGCAATGAGATCCCGCTaGGGCGACCAGACCAGGAAAATAATCTCCTGCGGGAGCTGCTTC +
Preference number: 6 (lower is better)
Translates to: SKTSPAVLAKAMRSR*GDQTRKIISCGSCF
Trigger: GAAGCAGCTCCCGCAGGAGATTATTTTCCTGGTCTGGTCGCCCAAGCGGGATCTCATTGCTTTGGCCAACACAGCTGGCGAGGTTTTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315368.8
ENST00000505080.1
ENST00000505991.1
ENST00000507809.1
ENST00000510092.5
CDS GCA 72 bp CCCAAGTCTGACTCTAATGCCCACCCTCTTCCACTGTaGTTTGTAGGCCCTCCCTTAGATAAAGCCATGCTG +
Preference number: 6 (lower is better)
Translates to: PKSDSNAHPLPL*FVGPPLDKAML
Trigger: CAGCATGGCTTTATCTAAGGGAGGGCCTACAAAGCACAGTGGAAGAGGGTGGGCATTAGAGTCAGACTTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515848.1
CDS CCA 72 bp ACTATCTCTGGAGCTAAAGCGGCAGCACCAGCTTGTTaGTTCTCTGCCTCTGACTCCGACAACACTTCTTCC +
Preference number: 6 (lower is better)
Translates to: TISGAKAAAPAC*FSASDSDNTSS
Trigger: GGAAGAAGTGTTGTCGGAGTCAGAGGCAGAGAACCAACAAGCTGGTGCTGCCGCTTTAGCTCCAGAGATAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315368.8
ENST00000504256.5
ENST00000506973.1
ENST00000510092.5
CDS CCA 72 bp GGTATCAGCAAGAGCAAAGGCCAAAAGTTTGCCATCTaGTCTCCATGCCAGACACGTCACCTCCTTTCCTGT +
Preference number: 6 (lower is better)
Translates to: GISKSKGQKFAI*SPCQTRHLLSC
Trigger: ACAGGAAAGGAGGTGACGTGTCTGGCATGGAGACCAGATGGCAAACTTTTGGCCTTTGCTCTTGCTGATACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315368.8
ENST00000505991.1
ENST00000510092.5
CDS GCA 72 bp TTTTCTTGGTATCAGCAAGAGCAAAGGCCAAAAGTTTaGCATCTGGTCTCCATGCCAGACACGTCACCTCCT +
Preference number: 6 (lower is better)
Translates to: FSWYQQEQRPKV*HLVSMPDTSPP
Trigger: AGGAGGTGACGTGTCTGGCATGGAGACCAGATGGCAAACTTTTGGCCTTTGCTCTTGCTGATACCAAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315368.8
ENST00000505991.1
ENST00000510092.5
CDS GCA 72 bp TTGGTCGTAACAAGAACTTCAGCCCTGCAGGCCATCTaGCCATGGGAACCACATTACTTTCTTTGTCAACAG +
Preference number: 6 (lower is better)
Translates to: LVVTRTSALQAI*PWEPHYFLCQQ
Trigger: CTGTTGACAAAGAAAGTAATGTGGTTCCCATGGGCAGATGGCCTGCAGGGCTGAAGTTCTTGTTACGACCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504256.5
ENST00000506973.1
CDS CAA 72 bp ATTTTCTTGGTATCAGCAAGAGCAAAGGCCAAAAGTTaGCCATCTGGTCTCCATGCCAGACACGTCACCTCC +
Preference number: 6 (lower is better)
Translates to: IFLVSARAKAKS*PSGLHARHVTS
Trigger: GGAGGTGACGTGTCTGGCATGGAGACCAGATGGCAAACTTTTGGCCTTTGCTCTTGCTGATACCAAGAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315368.8
ENST00000505991.1
ENST00000510092.5
CDS CAA 90 bp TTCAGCCCTGCAGGCCATCTGCCCATGGGAACCACATTACTTTCTTaGTCAACAGGGAGCTCAGGAGTATTAATTATAGGAAACCGTACG +
Preference number: 6 (lower is better)
Translates to: FSPAGHLPMGTTLLS*STGSSGVLIIGNRT
Trigger: CGTACGGTTTCCTATAATTAATACTCCTGAGCTCCCTGTTGACAAAGAAAGTAATGTGGTTCCCATGGGCAGATGGCCTGCAGGGCTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504256.5
ENST00000506973.1
CDS GCA 72 bp AAGAGCAAAGGCCAAAAGTTTGCCATCTGGTCTCCATaGCAGACACGTCACCTCCTTTCCTGTATTTTCATT +
Preference number: 6 (lower is better)
Translates to: KSKGQKFAIWSP*QTRHLLSCIFI
Trigger: AATGAAAATACAGGAAAGGAGGTGACGTGTCTGGCATGGAGACCAGATGGCAAACTTTTGGCCTTTGCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315368.8
ENST00000505991.1
ENST00000510092.5
CDS CAA 72 bp GCAGGCCATCTGCCCATGGGAACCACATTACTTTCTTaGTCAACAGGGAGCTCAGGAGTATTAATTATAGGA +
Preference number: 6 (lower is better)
Translates to: AGHLPMGTTLLS*STGSSGVLIIG
Trigger: TCCTATAATTAATACTCCTGAGCTCCCTGTTGACAAAGAAAGTAATGTGGTTCCCATGGGCAGATGGCCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504256.5
ENST00000506973.1
CDS GCA 72 bp TTTCACACAACCTCATTAAAAACGACCATGGTCTTCTaGCTTTCATCAACCCCCGCTGACAGCTCACTAAAA +
Preference number: 6 (lower is better)
Translates to: FHTTSLKTTMVF*LSSTPADSSLK
Trigger: TTTTAGTGAGCTGTCAGCGGGGGTTGATGAAAGGCAGAAGACCATGGTCGTTTTTAATGAGGTTGTGTGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000515848.1
CDS GCA 72 bp ACATACTGTGCTTTCATACTTTCCAGTAATCTCCAGTaGTTCTCAAAATGCATGGTACGGGTGGGAATAGCA +
Preference number: 6 (lower is better)
Translates to: TYCAFILSSNLQ*FSKCMVRVGIA
Trigger: TGCTATTCCCACCCGTACCATGCATTTTGAGAAGCACTGGAGATTACTGGAAAGTATGAAAGCACAGTATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315368.8
ENST00000504256.5
ENST00000506973.1
ENST00000510092.5
ENST00000515848.1
CDS CCA 72 bp GAATCTTCACTGTTATATACTAAAGACAAAGGCAGCTaGACCAAGAGTCTATCTCTTCCTTCACGTCCTACA +
Preference number: 6 (lower is better)
Translates to: ESSLLYTKDKGS*TKSLSLPSRPT
Trigger: TGTAGGACGTGAAGGAAGAGATAGACTCTTGGTCCAGCTGCCTTTGTCTTTAGTATATAACAGTGAAGATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315368.8
ENST00000504256.5
ENST00000506973.1
ENST00000510092.5
ENST00000515848.1
CDS GCA 72 bp TTTTCCTGCACAAACTTGGTGAGACGAGAATCCATCTaGATTAGTATTTCTTCCCATGCTTCACACATACAT +
Preference number: 6 (lower is better)
Translates to: FSCTNLVRRESI*ISISSHASHIH
Trigger: ATGTATGTGTGAAGCATGGGAAGAAATACTAATGCAGATGGATTCTCGTCTCACCAAGTTTGTGCAGGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS GCA 72 bp TGTAATATTATCATTACGTTTGCCATCTGGTCTCCATaGCAGACACGTCACCTCCTTTCCTGTATTTTCATT +
Preference number: 6 (lower is better)
Translates to: CNIIITFAIWSP*QTRHLLSCIFI
Trigger: AATGAAAATACAGGAAAGGAGGTGACGTGTCTGGCATGGAGACCAGATGGCAAACGTAATGATAATATTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507809.1
CDS CAA 90 bp AAGTCAAATCATTCTCTATGTATAAATACACAAAGAATCCTGCCCTaGATGTGGGAAGTGGCAAAGCCCTTTTACCTATATTACCACCGT +
Preference number: 6 (lower is better)
Translates to: KSNHSLCINTQRILP*MWEVAKPFYLYYHR
Trigger: ACGGTGGTAATATAGGTAAAAGGGCTTTGCCACTTCCCACATCAAGGGCAGGATTCTTTGTGTATTTATACATAGAGAATGATTTGACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504256.5
ENST00000506973.1
CDS TCA 72 bp CTTAAGTCTCAGTCAATTAAAGCCATCTCTTGGAATTaGCAGTATACTTCCTACATGGGTACTGAGGTCTTA +
Preference number: 6 (lower is better)
Translates to: LKSQSIKAISWN*QYTSYMGTEVL
Trigger: TAAGACCTCAGTACCCATGTAGGAAGTATACTGTCAATTCCAAGAGATGGCTTTAATTGACTGAGACTTAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504256.5
CDS GCA 72 bp ATTCCTGCAGCATCTAGTCCAAGAGGTTCATATTTTTaGTTCCATGAAGCCATTCCTTTCAATTCACTCAAA +
Preference number: 6 (lower is better)
Translates to: IPAASSPRGSYF*FHEAIPFNSLK
Trigger: TTTGAGTGAATTGAAAGGAATGGCTTCATGGAAGCAAAAATATGAACCTCTTGGACTAGATGCTGCAGGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315368.8
ENST00000503805.5
ENST00000510092.5
CDS CAA 72 bp AAACAGCAAAGGACTTTCTTTAAGGTGGCTGCTATTTaGAAGAAAGTCATACCACTGGTTTCCTTCTGTGTT +
Preference number: 6 (lower is better)
Translates to: KQQRTFFKVAAI*KKVIPLVSFCV
Trigger: AACACAGAAGGAAACCAGTGGTATGACTTTCTTCAAAATAGCAGCCACCTTAAAGAAAGTCCTTTGCTGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315368.8
ENST00000504256.5
ENST00000505842.5
ENST00000510092.5
CDS CAA 72 bp CATTCTCTATGTATAAATACACAAAGAATCCTGCCCTaGATGTGGGAAGTGGCAAAGCCCTTTTACCTATAT +
Preference number: 6 (lower is better)
Translates to: HSLCINTQRILP*MWEVAKPFYLY
Trigger: ATATAGGTAAAAGGGCTTTGCCACTTCCCACATCAAGGGCAGGATTCTTTGTGTATTTATACATAGAGAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504256.5
ENST00000506973.1
CDS CAA 90 bp AGAATCCTCACTTCTGGTATCTCTATACAATGGAATACAGATTGCTaGATTCATCGATTTTCCAATTACATCTGCTGGCTTTTGCAAACA +
Preference number: 6 (lower is better)
Translates to: RILTSGISIQWNTDC*IHRFSNYICWLLQT
Trigger: TGTTTGCAAAAGCCAGCAGATGTAATTGGAAAATCGATGAATCAAGCAATCTGTATTCCATTGTATAGAGATACCAGAAGTGAGGATTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS TCA 72 bp CTTCTGGTATCTCTATACAATGGAATACAGATTGCTTaGTTCATCGATTTTCCAATTACATCTGCTGGCTTT +
Preference number: 6 (lower is better)
Translates to: LLVSLYNGIQIA*FIDFPITSAGF
Trigger: AAAGCCAGCAGATGTAATTGGAAAATCGATGAATCAAGCAATCTGTATTCCATTGTATAGAGATACCAGAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315368.8
ENST00000510092.5
CDS TCA 72 bp CATTCATCATCTATGTCCATTTCAAATACTCTCACATaGCGAAGATTTGAGCTTAACACACAGGACACTTTT +
Preference number: 6 (lower is better)
Translates to: HSSSMSISNTLT*RRFELNTQDTF
Trigger: AAAAGTGTCCTGTGTGTTAAGCTCAAATCTTCGTCATGTGAGAGTATTTGAAATGGACATAGATGATGAATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315368.8
ENST00000504256.5
ENST00000510092.5
ENST00000515848.1
CDS TCA 72 bp ATAATAAAGACTCCGAGCCACTCTGTAAATGACTTATaGCCAATTTTTGTATACTGGAGTATGATGACTCTA +
Preference number: 6 (lower is better)
Translates to: IIKTPSHSVNDL*PIFVYWSMMTL
Trigger: TAGAGTCATCATACTCCAGTATACAAAAATTGGTCATAAGTCATTTACAGAGTGGCTCGGAGTCTTTATTAT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315368.8
ENST00000503805.5
ENST00000510092.5