RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ANAPC16 (Homo sapiens)

Ensembl gene IDs: ENSG00000166295

Ensembl transcript IDs: ENST00000299381.5, ENST00000470481.2, ENST00000478193.5, ENST00000615507.4, ENST00000621663.4

Found 216 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGTGGATCTCTGGATGGCTATGTAAGCTGTGAGAAAGTCCCCCACTaGCTTTGCACTTGCTGCGCACCAGAGGTGACCATCCAGGCAGTA +
Preference number: 1 (lower is better)
Translates to: CGSLDGYVSCEKVPH*LCTCCAPEVTIQAV
Trigger: TACTGCCTGGATGGTCACCTCTGGTGCGCAGCAAGTGCAAAGCCAGTGGGGGACTTTCTCACAGCTTACATAGCCATCCAGAGATCCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
3UTR TCA 90 bp GCCACTGTGCCCAGTCTCCAATTTGCTTTAGAGGCAATAATGAGATaGATTATCAGGCAACTGGGATCTATTCCAAGTCCGAGATTTTCT +
Preference number: 1 (lower is better)
Translates to: ATVPSLQFALEAIMR*IIRQLGSIPSPRFS
Trigger: AGAAAATCTCGGACTTGGAATAGATCCCAGTTGCCTGATAATTCATCTCATTATTGCCTCTAAAGCAAATTGGAGACTGGGCACAGTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
3UTR TCA 90 bp AATAGATACAGAGAAACCAAGTACAAATGTGCATTAACAATTCAGTaGCGTAGCTGTGGATCTCTGGATGGCTATGTAAGCTGTGAGAAA +
Preference number: 1 (lower is better)
Translates to: NRYRETKYKCALTIQ*RSCGSLDGYVSCEK
Trigger: TTTCTCACAGCTTACATAGCCATCCAGAGATCCACAGCTACGTCACTGAATTGTTAATGCACATTTGTACTTGGTTTCTCTGTATCTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
3UTR-3UTR GCA 90 bp CACAGGGCTCAGGCTCTTAACCGACTGAATGAGGTCACCACCTCCCGTCAGGTACACTGGCTTTGCACTTaGTGCGCACCAGAGGTGACC +
Preference number: 2 (lower is better)
Translates to: HRAQALNRLNEVTTSRQVHWLCT*CAPEVT
Trigger: GGTCACCTCTGGTGCGCAGCAAGTGCAAAGCCAGTG...TACCTGACGGGAGGTGGTGACCTCATTCAGTCGGTTAAGAGCCTGAGCCCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
3UTR-3UTR GCA 90 bp CACAGGGCTCAGGCTCTTAACCGACTGAATGAGGTCACCACCTCCCGTCAGGTATGGCTTTGCACTTGCTaGGCACCAGAGGTGACCATC +
Preference number: 2 (lower is better)
Translates to: HRAQALNRLNEVTTSRQVWLCTC*APEVTI
Trigger: GATGGTCACCTCTGGTGCGCAGCAAGTGCAAAGCCA...TACCTGACGGGAGGTGGTGACCTCATTCAGTCGGTTAAGAGCCTGAGCCCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
3UTR-3UTR CCA 90 bp CACAGGGCTCAGGCTCTTAACCGACTGAATGAGGTCACCACCTCCCGTCAGGTAGAGAAAGTCCCCCACTaGCTTTGCACTTGCTGCGCA +
Preference number: 2 (lower is better)
Translates to: HRAQALNRLNEVTTSRQVEKVPH*LCTCCA
Trigger: TGCGCAGCAAGTGCAAAGCCAGTGGGGGACTTTCTC...TACCTGACGGGAGGTGGTGACCTCATTCAGTCGGTTAAGAGCCTGAGCCCTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
3UTR-3UTR TCA 90 bp CACAGGGCTCAGGCTCTTAACCGACTGAATGAGGTCACCACCTCCCGTCAGGTACAGGCACCATATGGATaGCAGGACAGACGCCATTCA +
Preference number: 2 (lower is better)
Translates to: HRAQALNRLNEVTTSRQVQAPYG*QDRRHS
Trigger: TGAATGGCGTCTGTCCTGTCATCCATATGGTGCCTG...TACCTGACGGGAGGTGGTGACCTCATTCAGTCGGTTAAGAGCCTGAGCCCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
3UTR-3UTR TCA 90 bp GCTCAGGCTCTTAACCGACTGAATGAGGTCACCACCTCCCGTCAGGTAGAATGTAGGTGGATGTTGCAGTaGGCAGAGATCGCGCCATTG +
Preference number: 2 (lower is better)
Translates to: AQALNRLNEVTTSRQVECRWMLQ*AEIAPL
Trigger: CAATGGCGCGATCTCTGCTCACTGCAACATCCACCT...ACATTCTACCTGACGGGAGGTGGTGACCTCATTCAGTCGGTTAAGAGCCTGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
3UTR-3UTR TCA 90 bp CACAGGGCTCAGGCTCTTAACCGACTGAATGAGGTCACCACCTCCCGTCAGGTAGCCTGGTCAACATGGTaGAACCCCGTCTCTACTAAA +
Preference number: 2 (lower is better)
Translates to: HRAQALNRLNEVTTSRQVAWSTW*NPVSTK
Trigger: TTTAGTAGAGACGGGGTTTCACCATGTTGACCAGGC...TACCTGACGGGAGGTGGTGACCTCATTCAGTCGGTTAAGAGCCTGAGCCCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
3UTR-3UTR TCA 90 bp GCTCAGGCTCTTAACCGACTGAATGAGGTCACCACCTCCCGTCAGGTAGAATGTGGCAGGTGGATCACCTaGGGTCAGAAGTTCGAGACT +
Preference number: 2 (lower is better)
Translates to: AQALNRLNEVTTSRQVECGRWIT*GQKFET
Trigger: AGTCTCGAACTTCTGACCTCAGGTGATCCACCTGCC...ACATTCTACCTGACGGGAGGTGGTGACCTCATTCAGTCGGTTAAGAGCCTGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
3UTR-3UTR CCA 90 bp GCTCAGGCTCTTAACCGACTGAATGAGGTCACCACCTCCCGTCAGGTAGAATGTGAGAAAGTCCCCCACTaGCTTTGCACTTGCTGCGCA +
Preference number: 2 (lower is better)
Translates to: AQALNRLNEVTTSRQVECEKVPH*LCTCCA
Trigger: TGCGCAGCAAGTGCAAAGCCAGTGGGGGACTTTCTC...ACATTCTACCTGACGGGAGGTGGTGACCTCATTCAGTCGGTTAAGAGCCTGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
3UTR-3UTR CCA 90 bp CACAGGGCTCAGGCTCTTAACCGACTGAATGAGGTCACCACCTCCCGTCAGGTATTTCCAGGCACCATATaGATGACAGGACAGACGCCA +
Preference number: 2 (lower is better)
Translates to: HRAQALNRLNEVTTSRQVFPGTI*MTGQTP
Trigger: TGGCGTCTGTCCTGTCATCCATATGGTGCCTGGAAA...TACCTGACGGGAGGTGGTGACCTCATTCAGTCGGTTAAGAGCCTGAGCCCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
3UTR-3UTR TCA 90 bp GCTCAGGCTCTTAACCGACTGAATGAGGTCACCACCTCCCGTCAGGTAGAATGTTGGCTATGTAAGCTGTaGGAAAGTCCCCCACTGGCT +
Preference number: 2 (lower is better)
Translates to: AQALNRLNEVTTSRQVECWLCKL*ESPPLA
Trigger: AGCCAGTGGGGGACTTTCTCACAGCTTACATAGCCA...ACATTCTACCTGACGGGAGGTGGTGACCTCATTCAGTCGGTTAAGAGCCTGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
3UTR-3UTR TCA 90 bp GCTCAGGCTCTTAACCGACTGAATGAGGTCACCACCTCCCGTCAGGTAGAATGTGGCAGGAGAATTGCTTaGACCTGGGAGGTGGATGTT +
Preference number: 2 (lower is better)
Translates to: AQALNRLNEVTTSRQVECGRRIA*TWEVDV
Trigger: AACATCCACCTCCCAGGTTCAAGCAATTCTCCTGCC...ACATTCTACCTGACGGGAGGTGGTGACCTCATTCAGTCGGTTAAGAGCCTGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
3UTR-3UTR TCA 90 bp CACAGGGCTCAGGCTCTTAACCGACTGAATGAGGTCACCACCTCCCGTCAGGTAGCATTAACAATTCAGTaGCGTAGCTGTGGATCTCTG +
Preference number: 2 (lower is better)
Translates to: HRAQALNRLNEVTTSRQVALTIQ*RSCGSL
Trigger: CAGAGATCCACAGCTACGTCACTGAATTGTTAATGC...TACCTGACGGGAGGTGGTGACCTCATTCAGTCGGTTAAGAGCCTGAGCCCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
3UTR-3UTR TCA 90 bp CACAGGGCTCAGGCTCTTAACCGACTGAATGAGGTCACCACCTCCCGTCAGGTATCAGTTGGCCAAATCTaGTATATGCCCTACTTGGCT +
Preference number: 2 (lower is better)
Translates to: HRAQALNRLNEVTTSRQVSVGQI*YMPYLA
Trigger: AGCCAAGTAGGGCATATATCAGATTTGGCCAACTGA...TACCTGACGGGAGGTGGTGACCTCATTCAGTCGGTTAAGAGCCTGAGCCCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
3UTR-3UTR TCA 90 bp GCTCAGGCTCTTAACCGACTGAATGAGGTCACCACCTCCCGTCAGGTAGAATGTGCCTGGTCAACATGGTaGAACCCCGTCTCTACTAAA +
Preference number: 2 (lower is better)
Translates to: AQALNRLNEVTTSRQVECAWSTW*NPVSTK
Trigger: TTTAGTAGAGACGGGGTTTCACCATGTTGACCAGGC...ACATTCTACCTGACGGGAGGTGGTGACCTCATTCAGTCGGTTAAGAGCCTGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
3UTR-3UTR CCA 90 bp CACAGGGCTCAGGCTCTTAACCGACTGAATGAGGTCACCACCTCCCGTCAGGTACAGACGCCATTCAGTTaGCCAAATCTGATATATGCC +
Preference number: 2 (lower is better)
Translates to: HRAQALNRLNEVTTSRQVQTPFS*PNLIYA
Trigger: GGCATATATCAGATTTGGCCAACTGAATGGCGTCTG...TACCTGACGGGAGGTGGTGACCTCATTCAGTCGGTTAAGAGCCTGAGCCCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
3UTR-3UTR CCA 90 bp CACAGGGCTCAGGCTCTTAACCGACTGAATGAGGTCACCACCTCCCGTCAGGTAGTTTACTGTGGAAAGTaGGGTCCCATGAAGGAAAAC +
Preference number: 2 (lower is better)
Translates to: HRAQALNRLNEVTTSRQVVYCGK*GPMKEN
Trigger: GTTTTCCTTCATGGGACCCCACTTTCCACAGTAAAC...TACCTGACGGGAGGTGGTGACCTCATTCAGTCGGTTAAGAGCCTGAGCCCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
3UTR-3UTR TCA 90 bp GCTCAGGCTCTTAACCGACTGAATGAGGTCACCACCTCCCGTCAGGTAGAATGTGCATTAACAATTCAGTaGCGTAGCTGTGGATCTCTG +
Preference number: 2 (lower is better)
Translates to: AQALNRLNEVTTSRQVECALTIQ*RSCGSL
Trigger: CAGAGATCCACAGCTACGTCACTGAATTGTTAATGC...ACATTCTACCTGACGGGAGGTGGTGACCTCATTCAGTCGGTTAAGAGCCTGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
3UTR-3UTR GCA 90 bp AGAGGCAATAATGAGATGAATTATCAGGCAACTGGGATCTATTCCAAGTCCGAGGTCCCCCACTGGCTTTaGACTTGCTGCGCACCAGAG +
Preference number: 2 (lower is better)
Translates to: RGNNEMNYQATGIYSKSEVPHWL*TCCAPE
Trigger: CTCTGGTGCGCAGCAAGTGCAAAGCCAGTGGGGGAC...CTCGGACTTGGAATAGATCCCAGTTGCCTGATAATTCATCTCATTATTGCCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
3UTR-3UTR TCA 90 bp CACAGGGCTCAGGCTCTTAACCGACTGAATGAGGTCACCACCTCCCGTCAGGTAAAATCCCTGAGATTTTaGAAGGATAATGCCACCAAT +
Preference number: 2 (lower is better)
Translates to: HRAQALNRLNEVTTSRQVKSLRF*KDNATN
Trigger: ATTGGTGGCATTATCCTTTCAAAATCTCAGGGATTT...TACCTGACGGGAGGTGGTGACCTCATTCAGTCGGTTAAGAGCCTGAGCCCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
3UTR-3UTR GCA 90 bp CACAGGGCTCAGGCTCTTAACCGACTGAATGAGGTCACCACCTCCCGTCAGGTAAAAAGCACTTCTTTTTaGCAGCATTTGGCATGTCTA +
Preference number: 2 (lower is better)
Translates to: HRAQALNRLNEVTTSRQVKSTSF*QHLACL
Trigger: TAGACATGCCAAATGCTGGCAAAAAGAAGTGCTTTT...TACCTGACGGGAGGTGGTGACCTCATTCAGTCGGTTAAGAGCCTGAGCCCTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
3UTR-3UTR CCA 90 bp CACAGGGCTCAGGCTCTTAACCGACTGAATGAGGTCACCACCTCCCGTCAGGTACTTTTTGCCAGCATTTaGCATGTCTATAAGAGGTTA +
Preference number: 2 (lower is better)
Translates to: HRAQALNRLNEVTTSRQVLFASI*HVYKRL
Trigger: TAACCTCTTATAGACATGCCAAATGCTGGCAAAAAG...TACCTGACGGGAGGTGGTGACCTCATTCAGTCGGTTAAGAGCCTGAGCCCTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
3UTR-3UTR GCA 90 bp AGAGGCAATAATGAGATGAATTATCAGGCAACTGGGATCTATTCCAAGTCCGAGTGGCTTTGCACTTGCTaGGCACCAGAGGTGACCATC +
Preference number: 2 (lower is better)
Translates to: RGNNEMNYQATGIYSKSEWLCTC*APEVTI
Trigger: GATGGTCACCTCTGGTGCGCAGCAAGTGCAAAGCCA...CTCGGACTTGGAATAGATCCCAGTTGCCTGATAATTCATCTCATTATTGCCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
3UTR-3UTR GCA 90 bp CACAGGGCTCAGGCTCTTAACCGACTGAATGAGGTCACCACCTCCCGTCAGGTAAACCAAGTACAAATGTaGATTAACAATTCAGTGACG +
Preference number: 2 (lower is better)
Translates to: HRAQALNRLNEVTTSRQVNQVQM*INNSVT
Trigger: CGTCACTGAATTGTTAATGCACATTTGTACTTGGTT...TACCTGACGGGAGGTGGTGACCTCATTCAGTCGGTTAAGAGCCTGAGCCCTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
3UTR-3UTR GCA 90 bp GCTCAGGCTCTTAACCGACTGAATGAGGTCACCACCTCCCGTCAGGTAGAATGTGCCAAATCTGATATATaGCCTACTTGGCTTGTGAAA +
Preference number: 2 (lower is better)
Translates to: AQALNRLNEVTTSRQVECAKSDI*PTWLVK
Trigger: TTTCACAAGCCAAGTAGGGCATATATCAGATTTGGC...ACATTCTACCTGACGGGAGGTGGTGACCTCATTCAGTCGGTTAAGAGCCTGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
3UTR-3UTR CCA 90 bp CACAGGGCTCAGGCTCTTAACCGACTGAATGAGGTCACCACCTCCCGTCAGGTAATAATGCCACCAATTTaGAGCTCTTTCAAAGGATTT +
Preference number: 2 (lower is better)
Translates to: HRAQALNRLNEVTTSRQVIMPPI*SSFKGF
Trigger: AAATCCTTTGAAAGAGCTCCAAATTGGTGGCATTAT...TACCTGACGGGAGGTGGTGACCTCATTCAGTCGGTTAAGAGCCTGAGCCCTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
3UTR-3UTR CCA 90 bp AGAGGCAATAATGAGATGAATTATCAGGCAACTGGGATCTATTCCAAGTCCGAGTTTGGAGGCCAAGGTTaGGGGGATCTCTTGAGGCCA +
Preference number: 2 (lower is better)
Translates to: RGNNEMNYQATGIYSKSEFGGQG*GDLLRP
Trigger: TGGCCTCAAGAGATCCCCCCAACCTTGGCCTCCAAA...CTCGGACTTGGAATAGATCCCAGTTGCCTGATAATTCATCTCATTATTGCCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
3UTR-3UTR TCA 90 bp AGAGGCAATAATGAGATGAATTATCAGGCAACTGGGATCTATTCCAAGTCCGAGCAGGCACCATATGGATaGCAGGACAGACGCCATTCA +
Preference number: 2 (lower is better)
Translates to: RGNNEMNYQATGIYSKSEQAPYG*QDRRHS
Trigger: TGAATGGCGTCTGTCCTGTCATCCATATGGTGCCTG...CTCGGACTTGGAATAGATCCCAGTTGCCTGATAATTCATCTCATTATTGCCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
3UTR-3UTR TCA 90 bp AGAGGCAATAATGAGATGAATTATCAGGCAACTGGGATCTATTCCAAGTCCGAGGGCAGGAGAATTGCTTaGACCTGGGAGGTGGATGTT +
Preference number: 2 (lower is better)
Translates to: RGNNEMNYQATGIYSKSEGRRIA*TWEVDV
Trigger: AACATCCACCTCCCAGGTTCAAGCAATTCTCCTGCC...CTCGGACTTGGAATAGATCCCAGTTGCCTGATAATTCATCTCATTATTGCCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
3UTR-3UTR GCA 90 bp GCTCAGGCTCTTAACCGACTGAATGAGGTCACCACCTCCCGTCAGGTAGAATGTAAAAGCACTTCTTTTTaGCAGCATTTGGCATGTCTA +
Preference number: 2 (lower is better)
Translates to: AQALNRLNEVTTSRQVECKSTSF*QHLACL
Trigger: TAGACATGCCAAATGCTGGCAAAAAGAAGTGCTTTT...ACATTCTACCTGACGGGAGGTGGTGACCTCATTCAGTCGGTTAAGAGCCTGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
3UTR-3UTR TCA 90 bp AGAGGCAATAATGAGATGAATTATCAGGCAACTGGGATCTATTCCAAGTCCGAGGAAAGTGGGGTCCCATaGAGGAAAACAGCACATCTC +
Preference number: 2 (lower is better)
Translates to: RGNNEMNYQATGIYSKSEESGVP*RKTAHL
Trigger: GAGATGTGCTGTTTTCCTTCATGGGACCCCACTTTC...CTCGGACTTGGAATAGATCCCAGTTGCCTGATAATTCATCTCATTATTGCCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
3UTR-3UTR CCA 90 bp GCTCAGGCTCTTAACCGACTGAATGAGGTCACCACCTCCCGTCAGGTAGAATGTGATATATGCCCTACTTaGCTTGTGAAAATTTTTGAG +
Preference number: 2 (lower is better)
Translates to: AQALNRLNEVTTSRQVECDICPT*LVKIFE
Trigger: CTCAAAAATTTTCACAAGCCAAGTAGGGCATATATC...ACATTCTACCTGACGGGAGGTGGTGACCTCATTCAGTCGGTTAAGAGCCTGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
3UTR-3UTR CCA 90 bp GCTCAGGCTCTTAACCGACTGAATGAGGTCACCACCTCCCGTCAGGTAGAATGTATAATGCCACCAATTTaGAGCTCTTTCAAAGGATTT +
Preference number: 2 (lower is better)
Translates to: AQALNRLNEVTTSRQVECIMPPI*SSFKGF
Trigger: AAATCCTTTGAAAGAGCTCCAAATTGGTGGCATTAT...ACATTCTACCTGACGGGAGGTGGTGACCTCATTCAGTCGGTTAAGAGCCTGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
3UTR-3UTR GCA 90 bp ACCTCCTGGTTCTCTGAAACTGATTGTCTTAATCTGATTCCCAATACTTTTAAACACTGGCTTTGCACTTaGTGCGCACCAGAGGTGACC +
Preference number: 2 (lower is better)
Translates to: TSWFSETDCLNLIPNTFKHWLCT*CAPEVT
Trigger: GGTCACCTCTGGTGCGCAGCAAGTGCAAAGCCAGTG...TTTAAAAGTATTGGGAATCAGATTAAGACAATCAGTTTCAGAGAACCAGGAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
3UTR-3UTR TCA 90 bp AGAGGCAATAATGAGATGAATTATCAGGCAACTGGGATCTATTCCAAGTCCGAGGCATTAACAATTCAGTaGCGTAGCTGTGGATCTCTG +
Preference number: 2 (lower is better)
Translates to: RGNNEMNYQATGIYSKSEALTIQ*RSCGSL
Trigger: CAGAGATCCACAGCTACGTCACTGAATTGTTAATGC...CTCGGACTTGGAATAGATCCCAGTTGCCTGATAATTCATCTCATTATTGCCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
3UTR-3UTR TCA 90 bp AGAGGCAATAATGAGATGAATTATCAGGCAACTGGGATCTATTCCAAGTCCGAGTCAGTTGGCCAAATCTaGTATATGCCCTACTTGGCT +
Preference number: 2 (lower is better)
Translates to: RGNNEMNYQATGIYSKSESVGQI*YMPYLA
Trigger: AGCCAAGTAGGGCATATATCAGATTTGGCCAACTGA...CTCGGACTTGGAATAGATCCCAGTTGCCTGATAATTCATCTCATTATTGCCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
3UTR-3UTR TCA 90 bp ACCTCCTGGTTCTCTGAAACTGATTGTCTTAATCTGATTCCCAATACTTTTAAATGGCTATGTAAGCTGTaGGAAAGTCCCCCACTGGCT +
Preference number: 2 (lower is better)
Translates to: TSWFSETDCLNLIPNTFKWLCKL*ESPPLA
Trigger: AGCCAGTGGGGGACTTTCTCACAGCTTACATAGCCA...TTTAAAAGTATTGGGAATCAGATTAAGACAATCAGTTTCAGAGAACCAGGAGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
3UTR CAA 90 bp AATATTTCCAGGCACCATATGGATGACAGGACAGACGCCATTCAGTaGGCCAAATCTGATATATGCCCTACTTGGCTTGTGAAAATTTTT +
Preference number: 2 (lower is better)
Translates to: NISRHHMDDRTDAIQ*AKSDICPTWLVKIF
Trigger: AAAAATTTTCACAAGCCAAGTAGGGCATATATCAGATTTGGCCAACTGAATGGCGTCTGTCCTGTCATCCATATGGTGCCTGGAAATATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
3UTR-3UTR TCA 90 bp AGAGGCAATAATGAGATGAATTATCAGGCAACTGGGATCTATTCCAAGTCCGAGGCCCTACTTGGCTTGTaGAAATTTTTGAGTATCTCT +
Preference number: 2 (lower is better)
Translates to: RGNNEMNYQATGIYSKSEALLGL*KFLSIS
Trigger: AGAGATACTCAAAAATTTTCACAAGCCAAGTAGGGC...CTCGGACTTGGAATAGATCCCAGTTGCCTGATAATTCATCTCATTATTGCCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
3UTR-3UTR TCA 90 bp AGAGGCAATAATGAGATGAATTATCAGGCAACTGGGATCTATTCCAAGTCCGAGCATTTGGATAGGTCCTaGGTTGAAAACACATTCATC +
Preference number: 2 (lower is better)
Translates to: RGNNEMNYQATGIYSKSEHLDRS*VENTFI
Trigger: GATGAATGTGTTTTCAACTCAGGACCTATCCAAATG...CTCGGACTTGGAATAGATCCCAGTTGCCTGATAATTCATCTCATTATTGCCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
3UTR-3UTR GCA 90 bp AGAGGCAATAATGAGATGAATTATCAGGCAACTGGGATCTATTCCAAGTCCGAGAACCAAGTACAAATGTaGATTAACAATTCAGTGACG +
Preference number: 2 (lower is better)
Translates to: RGNNEMNYQATGIYSKSENQVQM*INNSVT
Trigger: CGTCACTGAATTGTTAATGCACATTTGTACTTGGTT...CTCGGACTTGGAATAGATCCCAGTTGCCTGATAATTCATCTCATTATTGCCTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
3UTR CAA 90 bp GTCACCACCTCCCGTCAGGTAGAATGTGTTAAACATTTTGAACTCTaGAGATTAAGGCTAAATGCTACTGGGATTATATTTACTTATAAT +
Preference number: 2 (lower is better)
Translates to: VTTSRQVECVKHFEL*RLRLNATGIIFTYN
Trigger: ATTATAAGTAAATATAATCCCAGTAGCATTTAGCCTTAATCTCAAGAGTTCAAAATGTTTAACACATTCTACCTGACGGGAGGTGGTGAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
3UTR-3UTR TCA 90 bp ACCTCCTGGTTCTCTGAAACTGATTGTCTTAATCTGATTCCCAATACTTTTAAAAGTATTTGTTGCCTGTaGATAGATACAGAGAAACCA +
Preference number: 2 (lower is better)
Translates to: TSWFSETDCLNLIPNTFKSICCL*IDTEKP
Trigger: TGGTTTCTCTGTATCTATTCACAGGCAACAAATACT...TTTAAAAGTATTGGGAATCAGATTAAGACAATCAGTTTCAGAGAACCAGGAGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
3UTR-3UTR GCA 90 bp ACCTCCTGGTTCTCTGAAACTGATTGTCTTAATCTGATTCCCAATACTTTTAAAAACCAAGTACAAATGTaGATTAACAATTCAGTGACG +
Preference number: 2 (lower is better)
Translates to: TSWFSETDCLNLIPNTFKNQVQM*INNSVT
Trigger: CGTCACTGAATTGTTAATGCACATTTGTACTTGGTT...TTTAAAAGTATTGGGAATCAGATTAAGACAATCAGTTTCAGAGAACCAGGAGGT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
3UTR-3UTR CAA 90 bp CACAGGGCTCAGGCTCTTAACCGACTGAATGAGGTCACCACCTCCCGTCAGGTACCACTGGCTTTGCACTaGCTGCGCACCAGAGGTGAC +
Preference number: 3 (lower is better)
Translates to: HRAQALNRLNEVTTSRQVPLALH*LRTRGD
Trigger: GTCACCTCTGGTGCGCAGCAAGTGCAAAGCCAGTGG...TACCTGACGGGAGGTGGTGACCTCATTCAGTCGGTTAAGAGCCTGAGCCCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
3UTR-3UTR CAA 90 bp GCTCAGGCTCTTAACCGACTGAATGAGGTCACCACCTCCCGTCAGGTAGAATGTAGTCCCCCACTGGCTTaGCACTTGCTGCGCACCAGA +
Preference number: 3 (lower is better)
Translates to: AQALNRLNEVTTSRQVECSPPLA*HLLRTR
Trigger: TCTGGTGCGCAGCAAGTGCAAAGCCAGTGGGGGACT...ACATTCTACCTGACGGGAGGTGGTGACCTCATTCAGTCGGTTAAGAGCCTGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
3UTR TCA 72 bp GGAGAATTGCTTGAACCTGGGAGGTGGATGTTGCAGTaGGCAGAGATCGCGCCATTGCGATACAGCCTGGGC +
Preference number: 3 (lower is better)
Translates to: GELLEPGRWMLQ*AEIAPLRYSLG
Trigger: GCCCAGGCTGTATCGCAATGGCGCGATCTCTGCTCACTGCAACATCCACCTCCCAGGTTCAAGCAATTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
3UTR GCA 72 bp GGCTATGTAAGCTGTGAGAAAGTCCCCCACTGGCTTTaGACTTGCTGCGCACCAGAGGTGACCATCCAGGCA +
Preference number: 3 (lower is better)
Translates to: GYVSCEKVPHWL*TCCAPEVTIQA
Trigger: TGCCTGGATGGTCACCTCTGGTGCGCAGCAAGTGCAAAGCCAGTGGGGGACTTTCTCACAGCTTACATAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
3UTR-3UTR CAA 90 bp CACAGGGCTCAGGCTCTTAACCGACTGAATGAGGTCACCACCTCCCGTCAGGTAAGGCAGGAGAATTGCTaGAACCTGGGAGGTGGATGT +
Preference number: 3 (lower is better)
Translates to: HRAQALNRLNEVTTSRQVRQENC*NLGGGC
Trigger: ACATCCACCTCCCAGGTTCAAGCAATTCTCCTGCCT...TACCTGACGGGAGGTGGTGACCTCATTCAGTCGGTTAAGAGCCTGAGCCCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
3UTR-3UTR CAA 90 bp GCTCAGGCTCTTAACCGACTGAATGAGGTCACCACCTCCCGTCAGGTAGAATGTAGGCAGGAGAATTGCTaGAACCTGGGAGGTGGATGT +
Preference number: 3 (lower is better)
Translates to: AQALNRLNEVTTSRQVECRQENC*NLGGGC
Trigger: ACATCCACCTCCCAGGTTCAAGCAATTCTCCTGCCT...ACATTCTACCTGACGGGAGGTGGTGACCTCATTCAGTCGGTTAAGAGCCTGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
3UTR-3UTR CAA 90 bp CACAGGGCTCAGGCTCTTAACCGACTGAATGAGGTCACCACCTCCCGTCAGGTACCACAGATGCTGACCTaGACCTTGACTGGTAAATAT +
Preference number: 3 (lower is better)
Translates to: HRAQALNRLNEVTTSRQVPQMLT*TLTGKY
Trigger: ATATTTACCAGTCAAGGTCAAGGTCAGCATCTGTGG...TACCTGACGGGAGGTGGTGACCTCATTCAGTCGGTTAAGAGCCTGAGCCCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
3UTR-3UTR CAA 90 bp CACAGGGCTCAGGCTCTTAACCGACTGAATGAGGTCACCACCTCCCGTCAGGTAATGCTGACCTTGACCTaGACTGGTAAATATTTCCAG +
Preference number: 3 (lower is better)
Translates to: HRAQALNRLNEVTTSRQVMLTLT*TGKYFQ
Trigger: CTGGAAATATTTACCAGTCAAGGTCAAGGTCAGCAT...TACCTGACGGGAGGTGGTGACCTCATTCAGTCGGTTAAGAGCCTGAGCCCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
3UTR-3UTR CAA 90 bp AGAGGCAATAATGAGATGAATTATCAGGCAACTGGGATCTATTCCAAGTCCGAGCCACTGGCTTTGCACTaGCTGCGCACCAGAGGTGAC +
Preference number: 3 (lower is better)
Translates to: RGNNEMNYQATGIYSKSEPLALH*LRTRGD
Trigger: GTCACCTCTGGTGCGCAGCAAGTGCAAAGCCAGTGG...CTCGGACTTGGAATAGATCCCAGTTGCCTGATAATTCATCTCATTATTGCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
3UTR-3UTR CAA 90 bp AGAGGCAATAATGAGATGAATTATCAGGCAACTGGGATCTATTCCAAGTCCGAGAGTCCCCCACTGGCTTaGCACTTGCTGCGCACCAGA +
Preference number: 3 (lower is better)
Translates to: RGNNEMNYQATGIYSKSESPPLA*HLLRTR
Trigger: TCTGGTGCGCAGCAAGTGCAAAGCCAGTGGGGGACT...CTCGGACTTGGAATAGATCCCAGTTGCCTGATAATTCATCTCATTATTGCCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
3UTR-3UTR CAA 90 bp GCTCAGGCTCTTAACCGACTGAATGAGGTCACCACCTCCCGTCAGGTAGAATGTACAGACGCCATTCAGTaGGCCAAATCTGATATATGC +
Preference number: 3 (lower is better)
Translates to: AQALNRLNEVTTSRQVECTDAIQ*AKSDIC
Trigger: GCATATATCAGATTTGGCCAACTGAATGGCGTCTGT...ACATTCTACCTGACGGGAGGTGGTGACCTCATTCAGTCGGTTAAGAGCCTGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
3UTR-3UTR CAA 90 bp CACAGGGCTCAGGCTCTTAACCGACTGAATGAGGTCACCACCTCCCGTCAGGTAAAAAAGCACTTCTTTTaGCCAGCATTTGGCATGTCT +
Preference number: 3 (lower is better)
Translates to: HRAQALNRLNEVTTSRQVKKHFF*PAFGMS
Trigger: AGACATGCCAAATGCTGGCAAAAAGAAGTGCTTTTT...TACCTGACGGGAGGTGGTGACCTCATTCAGTCGGTTAAGAGCCTGAGCCCTGTG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
3UTR-3UTR CAA 90 bp CACAGGGCTCAGGCTCTTAACCGACTGAATGAGGTCACCACCTCCCGTCAGGTAAAGCCAGTCTACCATTaGTTTAGGAGAGATGGTTTT +
Preference number: 3 (lower is better)
Translates to: HRAQALNRLNEVTTSRQVKPVYH*FRRDGF
Trigger: AAAACCATCTCTCCTAAACAAATGGTAGACTGGCTT...TACCTGACGGGAGGTGGTGACCTCATTCAGTCGGTTAAGAGCCTGAGCCCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
3UTR-3UTR CAA 90 bp AGAGGCAATAATGAGATGAATTATCAGGCAACTGGGATCTATTCCAAGTCCGAGGGTATAAAAACTTACTaGAGGCCAGGCGCGGTGGCT +
Preference number: 3 (lower is better)
Translates to: RGNNEMNYQATGIYSKSEGIKTY*RPGAVA
Trigger: AGCCACCGCGCCTGGCCTCAAGTAAGTTTTTATACC...CTCGGACTTGGAATAGATCCCAGTTGCCTGATAATTCATCTCATTATTGCCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
3UTR-3UTR CAA 90 bp ACCTCCTGGTTCTCTGAAACTGATTGTCTTAATCTGATTCCCAATACTTTTAAAAGTCCCCCACTGGCTTaGCACTTGCTGCGCACCAGA +
Preference number: 3 (lower is better)
Translates to: TSWFSETDCLNLIPNTFKSPPLA*HLLRTR
Trigger: TCTGGTGCGCAGCAAGTGCAAAGCCAGTGGGGGACT...TTTAAAAGTATTGGGAATCAGATTAAGACAATCAGTTTCAGAGAACCAGGAGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
3UTR-3UTR CAA 90 bp AGAGGCAATAATGAGATGAATTATCAGGCAACTGGGATCTATTCCAAGTCCGAGCCACAGATGCTGACCTaGACCTTGACTGGTAAATAT +
Preference number: 3 (lower is better)
Translates to: RGNNEMNYQATGIYSKSEPQMLT*TLTGKY
Trigger: ATATTTACCAGTCAAGGTCAAGGTCAGCATCTGTGG...CTCGGACTTGGAATAGATCCCAGTTGCCTGATAATTCATCTCATTATTGCCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
3UTR TCA 72 bp CCCAGTCTCCAATTTGCTTTAGAGGCAATAATGAGATaGATTATCAGGCAACTGGGATCTATTCCAAGTCCG +
Preference number: 3 (lower is better)
Translates to: PSLQFALEAIMR*IIRQLGSIPSP
Trigger: CGGACTTGGAATAGATCCCAGTTGCCTGATAATTCATCTCATTATTGCCTCTAAAGCAAATTGGAGACTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
3UTR-3UTR CAA 90 bp AGAGGCAATAATGAGATGAATTATCAGGCAACTGGGATCTATTCCAAGTCCGAGATGCTGACCTTGACCTaGACTGGTAAATATTTCCAG +
Preference number: 3 (lower is better)
Translates to: RGNNEMNYQATGIYSKSEMLTLT*TGKYFQ
Trigger: CTGGAAATATTTACCAGTCAAGGTCAAGGTCAGCAT...CTCGGACTTGGAATAGATCCCAGTTGCCTGATAATTCATCTCATTATTGCCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
3UTR TCA 72 bp AGAGAAACCAAGTACAAATGTGCATTAACAATTCAGTaGCGTAGCTGTGGATCTCTGGATGGCTATGTAAGC +
Preference number: 3 (lower is better)
Translates to: RETKYKCALTIQ*RSCGSLDGYVS
Trigger: GCTTACATAGCCATCCAGAGATCCACAGCTACGTCACTGAATTGTTAATGCACATTTGTACTTGGTTTCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
3UTR GCA 72 bp AGGACAGACGCCATTCAGTTGGCCAAATCTGATATATaGCCTACTTGGCTTGTGAAAATTTTTGAGTATCTC +
Preference number: 3 (lower is better)
Translates to: RTDAIQLAKSDI*PTWLVKIFEYL
Trigger: GAGATACTCAAAAATTTTCACAAGCCAAGTAGGGCATATATCAGATTTGGCCAACTGAATGGCGTCTGTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
3UTR-3UTR CAA 90 bp AGAGGCAATAATGAGATGAATTATCAGGCAACTGGGATCTATTCCAAGTCCGAGAAAAAGCACTTCTTTTaGCCAGCATTTGGCATGTCT +
Preference number: 3 (lower is better)
Translates to: RGNNEMNYQATGIYSKSEKKHFF*PAFGMS
Trigger: AGACATGCCAAATGCTGGCAAAAAGAAGTGCTTTTT...CTCGGACTTGGAATAGATCCCAGTTGCCTGATAATTCATCTCATTATTGCCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
3UTR-3UTR CAA 90 bp AGAGGCAATAATGAGATGAATTATCAGGCAACTGGGATCTATTCCAAGTCCGAGAAGCCAGTCTACCATTaGTTTAGGAGAGATGGTTTT +
Preference number: 3 (lower is better)
Translates to: RGNNEMNYQATGIYSKSEKPVYH*FRRDGF
Trigger: AAAACCATCTCTCCTAAACAAATGGTAGACTGGCTT...CTCGGACTTGGAATAGATCCCAGTTGCCTGATAATTCATCTCATTATTGCCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
3UTR GCA 72 bp GTTCAAATACCAAAGCGTAAAGATGATGTAACACAGTaGCTATGCTGCATGGTTACACAAATGAAACGAGAA +
Preference number: 3 (lower is better)
Translates to: VQIPKRKDDVTQ*LCCMVTQMKRE
Trigger: TTCTCGTTTCATTTGTGTAACCATGCAGCATAGGCACTGTGTTACATCATCTTTACGCTTTGGTATTTGAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR TCA 90 bp CACAGGGCTCAGGCTCTTAACCGACTGAATGAGGTCACCACCTCCCGTCAGGTACCCCCAGGACCAGCCTaGGTGGCTGCGCTCACCACG +
Preference number: 4 (lower is better)
Translates to: HRAQALNRLNEVTTSRQVPPGPA*VAALTT
Trigger: CGTGGTGAGCGCAGCCACTCAGGCTGGTCCTGGGGG...TACCTGACGGGAGGTGGTGACCTCATTCAGTCGGTTAAGAGCCTGAGCCCTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299381.5
ENST00000621663.4
CDS-3UTR TCA 90 bp GCTCAGGCTCTTAACCGACTGAATGAGGTCACCACCTCCCGTCAGGTAGAATGTCCCCCAGGACCAGCCTaGGTGGCTGCGCTCACCACG +
Preference number: 4 (lower is better)
Translates to: AQALNRLNEVTTSRQVECPPGPA*VAALTT
Trigger: CGTGGTGAGCGCAGCCACTCAGGCTGGTCCTGGGGG...ACATTCTACCTGACGGGAGGTGGTGACCTCATTCAGTCGGTTAAGAGCCTGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299381.5
ENST00000621663.4
CDS-3UTR GCA 90 bp GGCTATGTAAGCTGTGAGAAAGTCCCCCACTGGCTTTGCACTTGCTGCGCACCAACCAGCCTGAGTGGCTaGGCTCACCACGACGAGGAC +
Preference number: 4 (lower is better)
Translates to: GYVSCEKVPHWLCTCCAPTSLSG*AHHDED
Trigger: GTCCTCGTCGTGGTGAGCGCAGCCACTCAGGCTGGT...TGGTGCGCAGCAAGTGCAAAGCCAGTGGGGGACTTTCTCACAGCTTACATAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299381.5
ENST00000621663.4
CDS-3UTR GCA 90 bp GCTCAGGCTCTTAACCGACTGAATGAGGTCACCACCTCCCGTCAGGTAGAATGTACCAGCCTGAGTGGCTaGGCTCACCACGACGAGGAC +
Preference number: 4 (lower is better)
Translates to: AQALNRLNEVTTSRQVECTSLSG*AHHDED
Trigger: GTCCTCGTCGTGGTGAGCGCAGCCACTCAGGCTGGT...ACATTCTACCTGACGGGAGGTGGTGACCTCATTCAGTCGGTTAAGAGCCTGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299381.5
ENST00000621663.4
CDS-3UTR GCA 90 bp GGCTATGTAAGCTGTGAGAAAGTCCCCCACTGGCTTTGCACTTGCTGCGCACCAACGATCTCCACTCACTaGAACCTCCGCCTCCCGGGT +
Preference number: 4 (lower is better)
Translates to: GYVSCEKVPHWLCTCCAPTISTH*NLRLPG
Trigger: ACCCGGGAGGCGGAGGTTGCAGTGAGTGGAGATCGT...TGGTGCGCAGCAAGTGCAAAGCCAGTGGGGGACTTTCTCACAGCTTACATAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR CCA 90 bp GCTCAGGCTCTTAACCGACTGAATGAGGTCACCACCTCCCGTCAGGTAGAATGTCAGGACCAGCCTGAGTaGCTGCGCTCACCACGACGA +
Preference number: 4 (lower is better)
Translates to: AQALNRLNEVTTSRQVECQDQPE*LRSPRR
Trigger: TCGTCGTGGTGAGCGCAGCCACTCAGGCTGGTCCTG...ACATTCTACCTGACGGGAGGTGGTGACCTCATTCAGTCGGTTAAGAGCCTGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299381.5
ENST00000621663.4
CDS-3UTR TCA 90 bp CACAGGGCTCAGGCTCTTAACCGACTGAATGAGGTCACCACCTCCCGTCAGGTACTCCTTTGGGGTAGGTaGAAAGGGCTTTCCGTGGTG +
Preference number: 4 (lower is better)
Translates to: HRAQALNRLNEVTTSRQVLLWGR*KGLSVV
Trigger: CACCACGGAAAGCCCTTTTCACCTACCCCAAAGGAG...TACCTGACGGGAGGTGGTGACCTCATTCAGTCGGTTAAGAGCCTGAGCCCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR TCA 90 bp GGCTATGTAAGCTGTGAGAAAGTCCCCCACTGGCTTTGCACTTGCTGCGCACCAGCTGCGCACCAGAGGTaGCCATCCAGGCAGTATCAA +
Preference number: 4 (lower is better)
Translates to: GYVSCEKVPHWLCTCCAPAAHQR*PSRQYQ
Trigger: TTGATACTGCCTGGATGGTCACCTCTGGTGCGCAGC...TGGTGCGCAGCAAGTGCAAAGCCAGTGGGGGACTTTCTCACAGCTTACATAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR TCA 90 bp CACAGGGCTCAGGCTCTTAACCGACTGAATGAGGTCACCACCTCCCGTCAGGTAGGCAGGTGGATCACCTaGGGTCAGAAGTTCGAGACT +
Preference number: 4 (lower is better)
Translates to: HRAQALNRLNEVTTSRQVGRWIT*GQKFET
Trigger: AGTCTCGAACTTCTGACCTCAGGTGATCCACCTGCC...TACCTGACGGGAGGTGGTGACCTCATTCAGTCGGTTAAGAGCCTGAGCCCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR GCA 90 bp GCTCAGGCTCTTAACCGACTGAATGAGGTCACCACCTCCCGTCAGGTAGAATGTACGATCTCCACTCACTaGAACCTCCGCCTCCCGGGT +
Preference number: 4 (lower is better)
Translates to: AQALNRLNEVTTSRQVECTISTH*NLRLPG
Trigger: ACCCGGGAGGCGGAGGTTGCAGTGAGTGGAGATCGT...ACATTCTACCTGACGGGAGGTGGTGACCTCATTCAGTCGGTTAAGAGCCTGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR TCA 90 bp GGCTATGTAAGCTGTGAGAAAGTCCCCCACTGGCTTTGCACTTGCTGCGCACCATGGTGGGGCAAGGTCTaGGACACTGAAACCAGATCC +
Preference number: 4 (lower is better)
Translates to: GYVSCEKVPHWLCTCCAPWWGKV*DTETRS
Trigger: GGATCTGGTTTCAGTGTCTCAGACCTTGCCCCACCA...TGGTGCGCAGCAAGTGCAAAGCCAGTGGGGGACTTTCTCACAGCTTACATAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR TCA 90 bp GCTCAGGCTCTTAACCGACTGAATGAGGTCACCACCTCCCGTCAGGTAGAATGTAACCTGAAGAGGGGGTaGATCCCAGCAGCTGCTCGA +
Preference number: 4 (lower is better)
Translates to: AQALNRLNEVTTSRQVECNLKRG*IPAAAR
Trigger: TCGAGCAGCTGCTGGGATTCACCCCCTCTTCAGGTT...ACATTCTACCTGACGGGAGGTGGTGACCTCATTCAGTCGGTTAAGAGCCTGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR TCA 90 bp GGCTATGTAAGCTGTGAGAAAGTCCCCCACTGGCTTTGCACTTGCTGCGCACCAAGGTGGATGTTGCAGTaGGCAGAGATCGCGCCATTG +
Preference number: 4 (lower is better)
Translates to: GYVSCEKVPHWLCTCCAPRWMLQ*AEIAPL
Trigger: CAATGGCGCGATCTCTGCTCACTGCAACATCCACCT...TGGTGCGCAGCAAGTGCAAAGCCAGTGGGGGACTTTCTCACAGCTTACATAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR TCA 90 bp CACAGGGCTCAGGCTCTTAACCGACTGAATGAGGTCACCACCTCCCGTCAGGTAGGCAGGAGAATTGCTTaGACCTGGGAGGTGGATGTT +
Preference number: 4 (lower is better)
Translates to: HRAQALNRLNEVTTSRQVGRRIA*TWEVDV
Trigger: AACATCCACCTCCCAGGTTCAAGCAATTCTCCTGCC...TACCTGACGGGAGGTGGTGACCTCATTCAGTCGGTTAAGAGCCTGAGCCCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR TCA 90 bp GGCTATGTAAGCTGTGAGAAAGTCCCCCACTGGCTTTGCACTTGCTGCGCACCAGGCAGGTGGATCACCTaGGGTCAGAAGTTCGAGACT +
Preference number: 4 (lower is better)
Translates to: GYVSCEKVPHWLCTCCAPGRWIT*GQKFET
Trigger: AGTCTCGAACTTCTGACCTCAGGTGATCCACCTGCC...TGGTGCGCAGCAAGTGCAAAGCCAGTGGGGGACTTTCTCACAGCTTACATAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR CCA 90 bp GGCTATGTAAGCTGTGAGAAAGTCCCCCACTGGCTTTGCACTTGCTGCGCACCATTTGGAGGCCAAGGTTaGGGGGATCTCTTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: GYVSCEKVPHWLCTCCAPFGGQG*GDLLRP
Trigger: TGGCCTCAAGAGATCCCCCCAACCTTGGCCTCCAAA...TGGTGCGCAGCAAGTGCAAAGCCAGTGGGGGACTTTCTCACAGCTTACATAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR TCA 90 bp GCTCAGGCTCTTAACCGACTGAATGAGGTCACCACCTCCCGTCAGGTAGAATGTTGGTGGGGCAAGGTCTaGGACACTGAAACCAGATCC +
Preference number: 4 (lower is better)
Translates to: AQALNRLNEVTTSRQVECWWGKV*DTETRS
Trigger: GGATCTGGTTTCAGTGTCTCAGACCTTGCCCCACCA...ACATTCTACCTGACGGGAGGTGGTGACCTCATTCAGTCGGTTAAGAGCCTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR TCA 90 bp GGCTATGTAAGCTGTGAGAAAGTCCCCCACTGGCTTTGCACTTGCTGCGCACCATGGCTATGTAAGCTGTaGGAAAGTCCCCCACTGGCT +
Preference number: 4 (lower is better)
Translates to: GYVSCEKVPHWLCTCCAPWLCKL*ESPPLA
Trigger: AGCCAGTGGGGGACTTTCTCACAGCTTACATAGCCA...TGGTGCGCAGCAAGTGCAAAGCCAGTGGGGGACTTTCTCACAGCTTACATAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR GCA 90 bp GCTCAGGCTCTTAACCGACTGAATGAGGTCACCACCTCCCGTCAGGTAGAATGTGTGAATCCCAGCAGCTaGTCGATGGGCTTAAACCGC +
Preference number: 4 (lower is better)
Translates to: AQALNRLNEVTTSRQVECVNPSS*SMGLNR
Trigger: GCGGTTTAAGCCCATCGAGCAGCTGCTGGGATTCAC...ACATTCTACCTGACGGGAGGTGGTGACCTCATTCAGTCGGTTAAGAGCCTGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR GCA 90 bp GGCTATGTAAGCTGTGAGAAAGTCCCCCACTGGCTTTGCACTTGCTGCGCACCAAGGTGGGAGCCACTGTaGCCAGTCTCCAATTTGCTT +
Preference number: 4 (lower is better)
Translates to: GYVSCEKVPHWLCTCCAPRWEPL*PVSNLL
Trigger: AAGCAAATTGGAGACTGGGCACAGTGGCTCCCACCT...TGGTGCGCAGCAAGTGCAAAGCCAGTGGGGGACTTTCTCACAGCTTACATAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR CCA 90 bp GCTCAGGCTCTTAACCGACTGAATGAGGTCACCACCTCCCGTCAGGTAGAATGTTTTGGAGGCCAAGGTTaGGGGGATCTCTTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: AQALNRLNEVTTSRQVECFGGQG*GDLLRP
Trigger: TGGCCTCAAGAGATCCCCCCAACCTTGGCCTCCAAA...ACATTCTACCTGACGGGAGGTGGTGACCTCATTCAGTCGGTTAAGAGCCTGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR TCA 90 bp GGCTATGTAAGCTGTGAGAAAGTCCCCCACTGGCTTTGCACTTGCTGCGCACCAGAAAGTGGGGTCCCATaGAGGAAAACAGCACATCTC +
Preference number: 4 (lower is better)
Translates to: GYVSCEKVPHWLCTCCAPESGVP*RKTAHL
Trigger: GAGATGTGCTGTTTTCCTTCATGGGACCCCACTTTC...TGGTGCGCAGCAAGTGCAAAGCCAGTGGGGGACTTTCTCACAGCTTACATAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR TCA 90 bp GGCTATGTAAGCTGTGAGAAAGTCCCCCACTGGCTTTGCACTTGCTGCGCACCACTGGTCTTGAACTCCTaGCCTCTAGTGATCCACTCA +
Preference number: 4 (lower is better)
Translates to: GYVSCEKVPHWLCTCCAPLVLNS*PLVIHS
Trigger: TGAGTGGATCACTAGAGGTCAGGAGTTCAAGACCAG...TGGTGCGCAGCAAGTGCAAAGCCAGTGGGGGACTTTCTCACAGCTTACATAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR TCA 90 bp GCTCAGGCTCTTAACCGACTGAATGAGGTCACCACCTCCCGTCAGGTAGAATGTCATGCCTCAGCCTCCTaGGTAGCTGGGATTACAAGT +
Preference number: 4 (lower is better)
Translates to: AQALNRLNEVTTSRQVECHASAS*VAGITS
Trigger: ACTTGTAATCCCAGCTACTCAGGAGGCTGAGGCATG...ACATTCTACCTGACGGGAGGTGGTGACCTCATTCAGTCGGTTAAGAGCCTGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR TCA 90 bp GCTCAGGCTCTTAACCGACTGAATGAGGTCACCACCTCCCGTCAGGTAGAATGTCTGGTCTTGAACTCCTaGCCTCTAGTGATCCACTCA +
Preference number: 4 (lower is better)
Translates to: AQALNRLNEVTTSRQVECLVLNS*PLVIHS
Trigger: TGAGTGGATCACTAGAGGTCAGGAGTTCAAGACCAG...ACATTCTACCTGACGGGAGGTGGTGACCTCATTCAGTCGGTTAAGAGCCTGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR GCA 90 bp GGCTATGTAAGCTGTGAGAAAGTCCCCCACTGGCTTTGCACTTGCTGCGCACCATTTAAGCGATTCTCATaGCTCAGCCTCCTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: GYVSCEKVPHWLCTCCAPFKRFS*LSLLSS
Trigger: GCTACTCAGGAGGCTGAGGCATGAGAATCGCTTAAA...TGGTGCGCAGCAAGTGCAAAGCCAGTGGGGGACTTTCTCACAGCTTACATAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR GCA 90 bp GGCTATGTAAGCTGTGAGAAAGTCCCCCACTGGCTTTGCACTTGCTGCGCACCATCACCCAGACTAGAGTaGAATGGTGTGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: GYVSCEKVPHWLCTCCAPSPRLE*NGVISA
Trigger: AGCTGAGATCACACCATTGCACTCTAGTCTGGGTGA...TGGTGCGCAGCAAGTGCAAAGCCAGTGGGGGACTTTCTCACAGCTTACATAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR GCA 90 bp GCTCAGGCTCTTAACCGACTGAATGAGGTCACCACCTCCCGTCAGGTAGAATGTTTCAAACGATTCTGCTaGCTCAGCCTCCTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: AQALNRLNEVTTSRQVECFKRFC*LSLLSS
Trigger: GCTACTCAGGAGGCTGAGGCAGCAGAATCGTTTGAA...ACATTCTACCTGACGGGAGGTGGTGACCTCATTCAGTCGGTTAAGAGCCTGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR GCA 90 bp GCTCAGGCTCTTAACCGACTGAATGAGGTCACCACCTCCCGTCAGGTAGAATGTTTTAAGCGATTCTCCTaGTTCAGCCTCCCGAGTAGC +
Preference number: 4 (lower is better)
Translates to: AQALNRLNEVTTSRQVECFKRFS*FSLPSS
Trigger: GCTACTCGGGAGGCTGAAGCAGGAGAATCGCTTAAA...ACATTCTACCTGACGGGAGGTGGTGACCTCATTCAGTCGGTTAAGAGCCTGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621663.4
CDS-3UTR CCA 90 bp GGCTATGTAAGCTGTGAGAAAGTCCCCCACTGGCTTTGCACTTGCTGCGCACCACAGACTAGAGTGCAATaGTGTGATCTCAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: GYVSCEKVPHWLCTCCAPQTRVQ*CDLSSL
Trigger: CAGTGAGCTGAGATCACACCATTGCACTCTAGTCTG...TGGTGCGCAGCAAGTGCAAAGCCAGTGGGGGACTTTCTCACAGCTTACATAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR CCA 90 bp CACAGGGCTCAGGCTCTTAACCGACTGAATGAGGTCACCACCTCCCGTCAGGTATGTGAGTTGGTGGACTaGTACTTCTTGTGCTCTGAT +
Preference number: 4 (lower is better)
Translates to: HRAQALNRLNEVTTSRQVCELVD*YFLCSD
Trigger: ATCAGAGCACAAGAAGTACCAGTCCACCAACTCACA...TACCTGACGGGAGGTGGTGACCTCATTCAGTCGGTTAAGAGCCTGAGCCCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR TCA 90 bp CACAGGGCTCAGGCTCTTAACCGACTGAATGAGGTCACCACCTCCCGTCAGGTAATCCGAGCAACTTGCTaGTCATGTTTCACCTGTTTA +
Preference number: 4 (lower is better)
Translates to: HRAQALNRLNEVTTSRQVIRATC*SCFTCL
Trigger: TAAACAGGTGAAACATGATCAGCAAGTTGCTCGGAT...TACCTGACGGGAGGTGGTGACCTCATTCAGTCGGTTAAGAGCCTGAGCCCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299381.5
ENST00000621663.4
CDS-3UTR GCA 90 bp CACAGGGCTCAGGCTCTTAACCGACTGAATGAGGTCACCACCTCCCGTCAGGTAGCCCAGTCTCCAATTTaGTTTAGAGGCAATAATGAG +
Preference number: 4 (lower is better)
Translates to: HRAQALNRLNEVTTSRQVAQSPI*FRGNNE
Trigger: CTCATTATTGCCTCTAAAGCAAATTGGAGACTGGGC...TACCTGACGGGAGGTGGTGACCTCATTCAGTCGGTTAAGAGCCTGAGCCCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR GCA 90 bp CACAGGGCTCAGGCTCTTAACCGACTGAATGAGGTCACCACCTCCCGTCAGGTAGTAACACAGTGCCTATaGTGCATGGTTACACAAATG +
Preference number: 4 (lower is better)
Translates to: HRAQALNRLNEVTTSRQVVTQCL*CMVTQM
Trigger: CATTTGTGTAACCATGCAGCATAGGCACTGTGTTAC...TACCTGACGGGAGGTGGTGACCTCATTCAGTCGGTTAAGAGCCTGAGCCCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR CCA 90 bp GGCTATGTAAGCTGTGAGAAAGTCCCCCACTGGCTTTGCACTTGCTGCGCACCAGTTTACTGTGGAAAGTaGGGTCCCATGAAGGAAAAC +
Preference number: 4 (lower is better)
Translates to: GYVSCEKVPHWLCTCCAPVYCGK*GPMKEN
Trigger: GTTTTCCTTCATGGGACCCCACTTTCCACAGTAAAC...TGGTGCGCAGCAAGTGCAAAGCCAGTGGGGGACTTTCTCACAGCTTACATAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR CCA 90 bp CACAGGGCTCAGGCTCTTAACCGACTGAATGAGGTCACCACCTCCCGTCAGGTAGAATTATCAGGCAACTaGGATCTATTCCAAGTCCGA +
Preference number: 4 (lower is better)
Translates to: HRAQALNRLNEVTTSRQVELSGN*DLFQVR
Trigger: TCGGACTTGGAATAGATCCCAGTTGCCTGATAATTC...TACCTGACGGGAGGTGGTGACCTCATTCAGTCGGTTAAGAGCCTGAGCCCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR CCA 90 bp GCTCAGGCTCTTAACCGACTGAATGAGGTCACCACCTCCCGTCAGGTAGAATGTCAGACTAGAGTGCAATaGTGTGATCTCAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: AQALNRLNEVTTSRQVECQTRVQ*CDLSSL
Trigger: CAGTGAGCTGAGATCACACCATTGCACTCTAGTCTG...ACATTCTACCTGACGGGAGGTGGTGACCTCATTCAGTCGGTTAAGAGCCTGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR TCA 90 bp GGCTATGTAAGCTGTGAGAAAGTCCCCCACTGGCTTTGCACTTGCTGCGCACCAATCCGAGCAACTTGCTaGTCATGTTTCACCTGTTTA +
Preference number: 4 (lower is better)
Translates to: GYVSCEKVPHWLCTCCAPIRATC*SCFTCL
Trigger: TAAACAGGTGAAACATGATCAGCAAGTTGCTCGGAT...TGGTGCGCAGCAAGTGCAAAGCCAGTGGGGGACTTTCTCACAGCTTACATAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299381.5
ENST00000621663.4
CDS-3UTR TCA 90 bp CACAGGGCTCAGGCTCTTAACCGACTGAATGAGGTCACCACCTCCCGTCAGGTACATTTGGATAGGTCCTaGGTTGAAAACACATTCATC +
Preference number: 4 (lower is better)
Translates to: HRAQALNRLNEVTTSRQVHLDRS*VENTFI
Trigger: GATGAATGTGTTTTCAACTCAGGACCTATCCAAATG...TACCTGACGGGAGGTGGTGACCTCATTCAGTCGGTTAAGAGCCTGAGCCCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR TCA 90 bp GGCTATGTAAGCTGTGAGAAAGTCCCCCACTGGCTTTGCACTTGCTGCGCACCAGAGGCAATAATGAGATaGATTATCAGGCAACTGGGA +
Preference number: 4 (lower is better)
Translates to: GYVSCEKVPHWLCTCCAPEAIMR*IIRQLG
Trigger: TCCCAGTTGCCTGATAATTCATCTCATTATTGCCTC...TGGTGCGCAGCAAGTGCAAAGCCAGTGGGGGACTTTCTCACAGCTTACATAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR TCA 90 bp GGCTATGTAAGCTGTGAGAAAGTCCCCCACTGGCTTTGCACTTGCTGCGCACCAATTTTCAATAGAGACTaGGTTTCACCATGTCGGCCA +
Preference number: 4 (lower is better)
Translates to: GYVSCEKVPHWLCTCCAPIFNRD*VSPCRP
Trigger: TGGCCGACATGGTGAAACTCAGTCTCTATTGAAAAT...TGGTGCGCAGCAAGTGCAAAGCCAGTGGGGGACTTTCTCACAGCTTACATAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR TCA 90 bp CACAGGGCTCAGGCTCTTAACCGACTGAATGAGGTCACCACCTCCCGTCAGGTAGCATGGTTACACAAATaGAACGAGAAAGGTAGTGAT +
Preference number: 4 (lower is better)
Translates to: HRAQALNRLNEVTTSRQVAWLHK*NEKGSD
Trigger: ATCACTACCTTTCTCGTTTCATTTGTGTAACCATGC...TACCTGACGGGAGGTGGTGACCTCATTCAGTCGGTTAAGAGCCTGAGCCCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR GCA 90 bp CACAGGGCTCAGGCTCTTAACCGACTGAATGAGGTCACCACCTCCCGTCAGGTAGCCAAATCTGATATATaGCCTACTTGGCTTGTGAAA +
Preference number: 4 (lower is better)
Translates to: HRAQALNRLNEVTTSRQVAKSDI*PTWLVK
Trigger: TTTCACAAGCCAAGTAGGGCATATATCAGATTTGGC...TACCTGACGGGAGGTGGTGACCTCATTCAGTCGGTTAAGAGCCTGAGCCCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR GCA 90 bp AGAGGCAATAATGAGATGAATTATCAGGCAACTGGGATCTATTCCAAGTCCGAGACGATCTCCACTCACTaGAACCTCCGCCTCCCGGGT +
Preference number: 4 (lower is better)
Translates to: RGNNEMNYQATGIYSKSETISTH*NLRLPG
Trigger: ACCCGGGAGGCGGAGGTTGCAGTGAGTGGAGATCGT...CTCGGACTTGGAATAGATCCCAGTTGCCTGATAATTCATCTCATTATTGCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR GCA 90 bp CACAGGGCTCAGGCTCTTAACCGACTGAATGAGGTCACCACCTCCCGTCAGGTAACACAGTGCCTATGCTaGATGGTTACACAAATGAAA +
Preference number: 4 (lower is better)
Translates to: HRAQALNRLNEVTTSRQVTQCLC*MVTQMK
Trigger: TTTCATTTGTGTAACCATGCAGCATAGGCACTGTGT...TACCTGACGGGAGGTGGTGACCTCATTCAGTCGGTTAAGAGCCTGAGCCCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR GCA 90 bp GGCTATGTAAGCTGTGAGAAAGTCCCCCACTGGCTTTGCACTTGCTGCGCACCAGATGATGTAACACAGTaGCTATGCTGCATGGTTACA +
Preference number: 4 (lower is better)
Translates to: GYVSCEKVPHWLCTCCAPDDVTQ*LCCMVT
Trigger: TGTAACCATGCAGCATAGGCACTGTGTTACATCATC...TGGTGCGCAGCAAGTGCAAAGCCAGTGGGGGACTTTCTCACAGCTTACATAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR CCA 90 bp GCTCAGGCTCTTAACCGACTGAATGAGGTCACCACCTCCCGTCAGGTAGAATGTCAGACGCCATTCAGTTaGCCAAATCTGATATATGCC +
Preference number: 4 (lower is better)
Translates to: AQALNRLNEVTTSRQVECQTPFS*PNLIYA
Trigger: GGCATATATCAGATTTGGCCAACTGAATGGCGTCTG...ACATTCTACCTGACGGGAGGTGGTGACCTCATTCAGTCGGTTAAGAGCCTGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR CCA 90 bp GGCTATGTAAGCTGTGAGAAAGTCCCCCACTGGCTTTGCACTTGCTGCGCACCAGAATTATCAGGCAACTaGGATCTATTCCAAGTCCGA +
Preference number: 4 (lower is better)
Translates to: GYVSCEKVPHWLCTCCAPELSGN*DLFQVR
Trigger: TCGGACTTGGAATAGATCCCAGTTGCCTGATAATTC...TGGTGCGCAGCAAGTGCAAAGCCAGTGGGGGACTTTCTCACAGCTTACATAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR CCA 90 bp GGCTATGTAAGCTGTGAGAAAGTCCCCCACTGGCTTTGCACTTGCTGCGCACCAGAAAATGTGAGTTGGTaGACTGGTACTTCTTGTGCT +
Preference number: 4 (lower is better)
Translates to: GYVSCEKVPHWLCTCCAPENVSW*TGTSCA
Trigger: AGCACAAGAAGTACCAGTCCACCAACTCACATTTTC...TGGTGCGCAGCAAGTGCAAAGCCAGTGGGGGACTTTCTCACAGCTTACATAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR TCA 90 bp GGCTATGTAAGCTGTGAGAAAGTCCCCCACTGGCTTTGCACTTGCTGCGCACCAGCCCTACTTGGCTTGTaGAAATTTTTGAGTATCTCT +
Preference number: 4 (lower is better)
Translates to: GYVSCEKVPHWLCTCCAPALLGL*KFLSIS
Trigger: AGAGATACTCAAAAATTTTCACAAGCCAAGTAGGGC...TGGTGCGCAGCAAGTGCAAAGCCAGTGGGGGACTTTCTCACAGCTTACATAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR TCA 90 bp GGCTATGTAAGCTGTGAGAAAGTCCCCCACTGGCTTTGCACTTGCTGCGCACCACATTTGGATAGGTCCTaGGTTGAAAACACATTCATC +
Preference number: 4 (lower is better)
Translates to: GYVSCEKVPHWLCTCCAPHLDRS*VENTFI
Trigger: GATGAATGTGTTTTCAACTCAGGACCTATCCAAATG...TGGTGCGCAGCAAGTGCAAAGCCAGTGGGGGACTTTCTCACAGCTTACATAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR GCA 90 bp AGAGGCAATAATGAGATGAATTATCAGGCAACTGGGATCTATTCCAAGTCCGAGCACTGGCTTTGCACTTaGTGCGCACCAGAGGTGACC +
Preference number: 4 (lower is better)
Translates to: RGNNEMNYQATGIYSKSEHWLCT*CAPEVT
Trigger: GGTCACCTCTGGTGCGCAGCAAGTGCAAAGCCAGTG...CTCGGACTTGGAATAGATCCCAGTTGCCTGATAATTCATCTCATTATTGCCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR GCA 90 bp AGAGGCAATAATGAGATGAATTATCAGGCAACTGGGATCTATTCCAAGTCCGAGACAGGCGTGAGCCACTaGACCTCAGCGGCTTTAGCA +
Preference number: 4 (lower is better)
Translates to: RGNNEMNYQATGIYSKSETGVSH*TSAALA
Trigger: TGCTAAAGCCGCTGAGGTGCAGTGGCTCACGCCTGT...CTCGGACTTGGAATAGATCCCAGTTGCCTGATAATTCATCTCATTATTGCCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621663.4
CDS-3UTR GCA 90 bp CACAGGGCTCAGGCTCTTAACCGACTGAATGAGGTCACCACCTCCCGTCAGGTAAGTTCTTACTTCACATaGCTGGCTGAAACTTATGTT +
Preference number: 4 (lower is better)
Translates to: HRAQALNRLNEVTTSRQVSSYFT*LAETYV
Trigger: AACATAAGTTTCAGCCAGGCATGTGAAGTAAGAACT...TACCTGACGGGAGGTGGTGACCTCATTCAGTCGGTTAAGAGCCTGAGCCCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621663.4
CDS-3UTR CCA 90 bp GCTCAGGCTCTTAACCGACTGAATGAGGTCACCACCTCCCGTCAGGTAGAATGTGAAAATGTGAGTTGGTaGACTGGTACTTCTTGTGCT +
Preference number: 4 (lower is better)
Translates to: AQALNRLNEVTTSRQVECENVSW*TGTSCA
Trigger: AGCACAAGAAGTACCAGTCCACCAACTCACATTTTC...ACATTCTACCTGACGGGAGGTGGTGACCTCATTCAGTCGGTTAAGAGCCTGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR CCA 90 bp CACAGGGCTCAGGCTCTTAACCGACTGAATGAGGTCACCACCTCCCGTCAGGTAATAGAAAATGTGAGTTaGTGGACTGGTACTTCTTGT +
Preference number: 4 (lower is better)
Translates to: HRAQALNRLNEVTTSRQVIENVS*WTGTSC
Trigger: ACAAGAAGTACCAGTCCACCAACTCACATTTTCTAT...TACCTGACGGGAGGTGGTGACCTCATTCAGTCGGTTAAGAGCCTGAGCCCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR CCA 90 bp AGAGGCAATAATGAGATGAATTATCAGGCAACTGGGATCTATTCCAAGTCCGAGTCTTGTTGCCCAGGCTaGAAATGGCGCGATCTCGGC +
Preference number: 4 (lower is better)
Translates to: RGNNEMNYQATGIYSKSESCCPG*KWRDLG
Trigger: GCCGAGATCGCGCCATTTCCAGCCTGGGCAACAAGA...CTCGGACTTGGAATAGATCCCAGTTGCCTGATAATTCATCTCATTATTGCCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621663.4
3UTR CAA 72 bp AGGCACCATATGGATGACAGGACAGACGCCATTCAGTaGGCCAAATCTGATATATGCCCTACTTGGCTTGTG +
Preference number: 4 (lower is better)
Translates to: RHHMDDRTDAIQ*AKSDICPTWLV
Trigger: CACAAGCCAAGTAGGGCATATATCAGATTTGGCCAACTGAATGGCGTCTGTCCTGTCATCCATATGGTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR TCA 90 bp GGCTATGTAAGCTGTGAGAAAGTCCCCCACTGGCTTTGCACTTGCTGCGCACCAAGTATTTGTTGCCTGTaGATAGATACAGAGAAACCA +
Preference number: 4 (lower is better)
Translates to: GYVSCEKVPHWLCTCCAPSICCL*IDTEKP
Trigger: TGGTTTCTCTGTATCTATTCACAGGCAACAAATACT...TGGTGCGCAGCAAGTGCAAAGCCAGTGGGGGACTTTCTCACAGCTTACATAGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR TCA 90 bp GCTCAGGCTCTTAACCGACTGAATGAGGTCACCACCTCCCGTCAGGTAGAATGTGCCCTACTTGGCTTGTaGAAATTTTTGAGTATCTCT +
Preference number: 4 (lower is better)
Translates to: AQALNRLNEVTTSRQVECALLGL*KFLSIS
Trigger: AGAGATACTCAAAAATTTTCACAAGCCAAGTAGGGC...ACATTCTACCTGACGGGAGGTGGTGACCTCATTCAGTCGGTTAAGAGCCTGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR TCA 90 bp GGCTATGTAAGCTGTGAGAAAGTCCCCCACTGGCTTTGCACTTGCTGCGCACCAAAATCCCTGAGATTTTaGAAGGATAATGCCACCAAT +
Preference number: 4 (lower is better)
Translates to: GYVSCEKVPHWLCTCCAPKSLRF*KDNATN
Trigger: ATTGGTGGCATTATCCTTTCAAAATCTCAGGGATTT...TGGTGCGCAGCAAGTGCAAAGCCAGTGGGGGACTTTCTCACAGCTTACATAGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR TCA 90 bp AGAGGCAATAATGAGATGAATTATCAGGCAACTGGGATCTATTCCAAGTCCGAGAGGTGGATGTTGCAGTaGGCAGAGATCGCGCCATTG +
Preference number: 4 (lower is better)
Translates to: RGNNEMNYQATGIYSKSERWMLQ*AEIAPL
Trigger: CAATGGCGCGATCTCTGCTCACTGCAACATCCACCT...CTCGGACTTGGAATAGATCCCAGTTGCCTGATAATTCATCTCATTATTGCCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR TCA 90 bp AGAGGCAATAATGAGATGAATTATCAGGCAACTGGGATCTATTCCAAGTCCGAGGGCAGGTGGATCACCTaGGGTCAGAAGTTCGAGACT +
Preference number: 4 (lower is better)
Translates to: RGNNEMNYQATGIYSKSEGRWIT*GQKFET
Trigger: AGTCTCGAACTTCTGACCTCAGGTGATCCACCTGCC...CTCGGACTTGGAATAGATCCCAGTTGCCTGATAATTCATCTCATTATTGCCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR TCA 90 bp GCTCAGGCTCTTAACCGACTGAATGAGGTCACCACCTCCCGTCAGGTAGAATGTGCATGGTTACACAAATaGAACGAGAAAGGTAGTGAT +
Preference number: 4 (lower is better)
Translates to: AQALNRLNEVTTSRQVECAWLHK*NEKGSD
Trigger: ATCACTACCTTTCTCGTTTCATTTGTGTAACCATGC...ACATTCTACCTGACGGGAGGTGGTGACCTCATTCAGTCGGTTAAGAGCCTGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR GCA 90 bp GCTCAGGCTCTTAACCGACTGAATGAGGTCACCACCTCCCGTCAGGTAGAATGTCTGTTTAAGCGTGGATaGCACTTGATAGCTAAAAAC +
Preference number: 4 (lower is better)
Translates to: AQALNRLNEVTTSRQVECLFKRG*HLIAKN
Trigger: GTTTTTAGCTATCAAGTGGCATCCACGCTTAAACAG...ACATTCTACCTGACGGGAGGTGGTGACCTCATTCAGTCGGTTAAGAGCCTGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299381.5
ENST00000621663.4
CDS-3UTR GCA 90 bp AGAGGCAATAATGAGATGAATTATCAGGCAACTGGGATCTATTCCAAGTCCGAGGTGAATCCCAGCAGCTaGTCGATGGGCTTAAACCGC +
Preference number: 4 (lower is better)
Translates to: RGNNEMNYQATGIYSKSEVNPSS*SMGLNR
Trigger: GCGGTTTAAGCCCATCGAGCAGCTGCTGGGATTCAC...CTCGGACTTGGAATAGATCCCAGTTGCCTGATAATTCATCTCATTATTGCCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR GCA 90 bp AGAGGCAATAATGAGATGAATTATCAGGCAACTGGGATCTATTCCAAGTCCGAGGAGTTTCCCTCTTGTTaGCCAGGCTGGAAATGGCGC +
Preference number: 4 (lower is better)
Translates to: RGNNEMNYQATGIYSKSEEFPSC*PGWKWR
Trigger: GCGCCATTTCCAGCCTGGGCAACAAGAGGGAAACTC...CTCGGACTTGGAATAGATCCCAGTTGCCTGATAATTCATCTCATTATTGCCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621663.4
CDS-3UTR CCA 90 bp AGAGGCAATAATGAGATGAATTATCAGGCAACTGGGATCTATTCCAAGTCCGAGGAGAAAGTCCCCCACTaGCTTTGCACTTGCTGCGCA +
Preference number: 4 (lower is better)
Translates to: RGNNEMNYQATGIYSKSEEKVPH*LCTCCA
Trigger: TGCGCAGCAAGTGCAAAGCCAGTGGGGGACTTTCTC...CTCGGACTTGGAATAGATCCCAGTTGCCTGATAATTCATCTCATTATTGCCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR CCA 90 bp GGCTATGTAAGCTGTGAGAAAGTCCCCCACTGGCTTTGCACTTGCTGCGCACCACTTTTTGCCAGCATTTaGCATGTCTATAAGAGGTTA +
Preference number: 4 (lower is better)
Translates to: GYVSCEKVPHWLCTCCAPLFASI*HVYKRL
Trigger: TAACCTCTTATAGACATGCCAAATGCTGGCAAAAAG...TGGTGCGCAGCAAGTGCAAAGCCAGTGGGGGACTTTCTCACAGCTTACATAGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR TCA 90 bp AGAGGCAATAATGAGATGAATTATCAGGCAACTGGGATCTATTCCAAGTCCGAGTGGCTATGTAAGCTGTaGGAAAGTCCCCCACTGGCT +
Preference number: 4 (lower is better)
Translates to: RGNNEMNYQATGIYSKSEWLCKL*ESPPLA
Trigger: AGCCAGTGGGGGACTTTCTCACAGCTTACATAGCCA...CTCGGACTTGGAATAGATCCCAGTTGCCTGATAATTCATCTCATTATTGCCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR TCA 90 bp GCTCAGGCTCTTAACCGACTGAATGAGGTCACCACCTCCCGTCAGGTAGAATGTAGTATTTGTTGCCTGTaGATAGATACAGAGAAACCA +
Preference number: 4 (lower is better)
Translates to: AQALNRLNEVTTSRQVECSICCL*IDTEKP
Trigger: TGGTTTCTCTGTATCTATTCACAGGCAACAAATACT...ACATTCTACCTGACGGGAGGTGGTGACCTCATTCAGTCGGTTAAGAGCCTGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR TCA 90 bp AGAGGCAATAATGAGATGAATTATCAGGCAACTGGGATCTATTCCAAGTCCGAGCATGCCTCAGCCTCCTaGGTAGCTGGGATTACAAGT +
Preference number: 4 (lower is better)
Translates to: RGNNEMNYQATGIYSKSEHASAS*VAGITS
Trigger: ACTTGTAATCCCAGCTACTCAGGAGGCTGAGGCATG...CTCGGACTTGGAATAGATCCCAGTTGCCTGATAATTCATCTCATTATTGCCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR GCA 90 bp GGCTATGTAAGCTGTGAGAAAGTCCCCCACTGGCTTTGCACTTGCTGCGCACCAAACCAAGTACAAATGTaGATTAACAATTCAGTGACG +
Preference number: 4 (lower is better)
Translates to: GYVSCEKVPHWLCTCCAPNQVQM*INNSVT
Trigger: CGTCACTGAATTGTTAATGCACATTTGTACTTGGTT...TGGTGCGCAGCAAGTGCAAAGCCAGTGGGGGACTTTCTCACAGCTTACATAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR GCA 90 bp AGAGGCAATAATGAGATGAATTATCAGGCAACTGGGATCTATTCCAAGTCCGAGAGGTGGGAGCCACTGTaGCCAGTCTCCAATTTGCTT +
Preference number: 4 (lower is better)
Translates to: RGNNEMNYQATGIYSKSERWEPL*PVSNLL
Trigger: AAGCAAATTGGAGACTGGGCACAGTGGCTCCCACCT...CTCGGACTTGGAATAGATCCCAGTTGCCTGATAATTCATCTCATTATTGCCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR CCA 90 bp ACCTCCTGGTTCTCTGAAACTGATTGTCTTAATCTGATTCCCAATACTTTTAAACAGGACCAGCCTGAGTaGCTGCGCTCACCACGACGA +
Preference number: 4 (lower is better)
Translates to: TSWFSETDCLNLIPNTFKQDQPE*LRSPRR
Trigger: TCGTCGTGGTGAGCGCAGCCACTCAGGCTGGTCCTG...TTTAAAAGTATTGGGAATCAGATTAAGACAATCAGTTTCAGAGAACCAGGAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299381.5
ENST00000621663.4
CDS-3UTR CCA 90 bp GGCTATGTAAGCTGTGAGAAAGTCCCCCACTGGCTTTGCACTTGCTGCGCACCAGATATATGCCCTACTTaGCTTGTGAAAATTTTTGAG +
Preference number: 4 (lower is better)
Translates to: GYVSCEKVPHWLCTCCAPDICPT*LVKIFE
Trigger: CTCAAAAATTTTCACAAGCCAAGTAGGGCATATATC...TGGTGCGCAGCAAGTGCAAAGCCAGTGGGGGACTTTCTCACAGCTTACATAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR CCA 90 bp GCTCAGGCTCTTAACCGACTGAATGAGGTCACCACCTCCCGTCAGGTAGAATGTCTTTTTGCCAGCATTTaGCATGTCTATAAGAGGTTA +
Preference number: 4 (lower is better)
Translates to: AQALNRLNEVTTSRQVECLFASI*HVYKRL
Trigger: TAACCTCTTATAGACATGCCAAATGCTGGCAAAAAG...ACATTCTACCTGACGGGAGGTGGTGACCTCATTCAGTCGGTTAAGAGCCTGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR CCA 90 bp GGCTATGTAAGCTGTGAGAAAGTCCCCCACTGGCTTTGCACTTGCTGCGCACCAATAATGCCACCAATTTaGAGCTCTTTCAAAGGATTT +
Preference number: 4 (lower is better)
Translates to: GYVSCEKVPHWLCTCCAPIMPPI*SSFKGF
Trigger: AAATCCTTTGAAAGAGCTCCAAATTGGTGGCATTAT...TGGTGCGCAGCAAGTGCAAAGCCAGTGGGGGACTTTCTCACAGCTTACATAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR TCA 90 bp AGAGGCAATAATGAGATGAATTATCAGGCAACTGGGATCTATTCCAAGTCCGAGCTGGTCTTGAACTCCTaGCCTCTAGTGATCCACTCA +
Preference number: 4 (lower is better)
Translates to: RGNNEMNYQATGIYSKSELVLNS*PLVIHS
Trigger: TGAGTGGATCACTAGAGGTCAGGAGTTCAAGACCAG...CTCGGACTTGGAATAGATCCCAGTTGCCTGATAATTCATCTCATTATTGCCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR GCA 90 bp ACCTCCTGGTTCTCTGAAACTGATTGTCTTAATCTGATTCCCAATACTTTTAAAGTCCCCCACTGGCTTTaGACTTGCTGCGCACCAGAG +
Preference number: 4 (lower is better)
Translates to: TSWFSETDCLNLIPNTFKVPHWL*TCCAPE
Trigger: CTCTGGTGCGCAGCAAGTGCAAAGCCAGTGGGGGAC...TTTAAAAGTATTGGGAATCAGATTAAGACAATCAGTTTCAGAGAACCAGGAGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR GCA 90 bp GCTCAGGCTCTTAACCGACTGAATGAGGTCACCACCTCCCGTCAGGTAGAATGTAACCAAGTACAAATGTaGATTAACAATTCAGTGACG +
Preference number: 4 (lower is better)
Translates to: AQALNRLNEVTTSRQVECNQVQM*INNSVT
Trigger: CGTCACTGAATTGTTAATGCACATTTGTACTTGGTT...ACATTCTACCTGACGGGAGGTGGTGACCTCATTCAGTCGGTTAAGAGCCTGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR GCA 90 bp AGAGGCAATAATGAGATGAATTATCAGGCAACTGGGATCTATTCCAAGTCCGAGTTCAAACGATTCTGCTaGCTCAGCCTCCTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: RGNNEMNYQATGIYSKSEFKRFC*LSLLSS
Trigger: GCTACTCAGGAGGCTGAGGCAGCAGAATCGTTTGAA...CTCGGACTTGGAATAGATCCCAGTTGCCTGATAATTCATCTCATTATTGCCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR TCA 90 bp ACCTCCTGGTTCTCTGAAACTGATTGTCTTAATCTGATTCCCAATACTTTTAAAAACCTGAAGAGGGGGTaGATCCCAGCAGCTGCTCGA +
Preference number: 4 (lower is better)
Translates to: TSWFSETDCLNLIPNTFKNLKRG*IPAAAR
Trigger: TCGAGCAGCTGCTGGGATTCACCCCCTCTTCAGGTT...TTTAAAAGTATTGGGAATCAGATTAAGACAATCAGTTTCAGAGAACCAGGAGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR GCA 90 bp AGAGGCAATAATGAGATGAATTATCAGGCAACTGGGATCTATTCCAAGTCCGAGTCACCCAGACTAGAGTaGAATGGTGTGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: RGNNEMNYQATGIYSKSESPRLE*NGVISA
Trigger: AGCTGAGATCACACCATTGCACTCTAGTCTGGGTGA...CTCGGACTTGGAATAGATCCCAGTTGCCTGATAATTCATCTCATTATTGCCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR GCA 90 bp ACCTCCTGGTTCTCTGAAACTGATTGTCTTAATCTGATTCCCAATACTTTTAAATGGCTTTGCACTTGCTaGGCACCAGAGGTGACCATC +
Preference number: 4 (lower is better)
Translates to: TSWFSETDCLNLIPNTFKWLCTC*APEVTI
Trigger: GATGGTCACCTCTGGTGCGCAGCAAGTGCAAAGCCA...TTTAAAAGTATTGGGAATCAGATTAAGACAATCAGTTTCAGAGAACCAGGAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR CCA 90 bp AGAGGCAATAATGAGATGAATTATCAGGCAACTGGGATCTATTCCAAGTCCGAGTGTGAGTTGGTGGACTaGTACTTCTTGTGCTCTGAT +
Preference number: 4 (lower is better)
Translates to: RGNNEMNYQATGIYSKSECELVD*YFLCSD
Trigger: ATCAGAGCACAAGAAGTACCAGTCCACCAACTCACA...CTCGGACTTGGAATAGATCCCAGTTGCCTGATAATTCATCTCATTATTGCCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR TCA 90 bp ACCTCCTGGTTCTCTGAAACTGATTGTCTTAATCTGATTCCCAATACTTTTAAACAGGCACCATATGGATaGCAGGACAGACGCCATTCA +
Preference number: 4 (lower is better)
Translates to: TSWFSETDCLNLIPNTFKQAPYG*QDRRHS
Trigger: TGAATGGCGTCTGTCCTGTCATCCATATGGTGCCTG...TTTAAAAGTATTGGGAATCAGATTAAGACAATCAGTTTCAGAGAACCAGGAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR TCA 90 bp ACCTCCTGGTTCTCTGAAACTGATTGTCTTAATCTGATTCCCAATACTTTTAAAGGCAGGAGAATTGCTTaGACCTGGGAGGTGGATGTT +
Preference number: 4 (lower is better)
Translates to: TSWFSETDCLNLIPNTFKGRRIA*TWEVDV
Trigger: AACATCCACCTCCCAGGTTCAAGCAATTCTCCTGCC...TTTAAAAGTATTGGGAATCAGATTAAGACAATCAGTTTCAGAGAACCAGGAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR GCA 90 bp AGAGGCAATAATGAGATGAATTATCAGGCAACTGGGATCTATTCCAAGTCCGAGGCCCAGTCTCCAATTTaGTTTAGAGGCAATAATGAG +
Preference number: 4 (lower is better)
Translates to: RGNNEMNYQATGIYSKSEAQSPI*FRGNNE
Trigger: CTCATTATTGCCTCTAAAGCAAATTGGAGACTGGGC...CTCGGACTTGGAATAGATCCCAGTTGCCTGATAATTCATCTCATTATTGCCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR GCA 90 bp AGAGGCAATAATGAGATGAATTATCAGGCAACTGGGATCTATTCCAAGTCCGAGGTAACACAGTGCCTATaGTGCATGGTTACACAAATG +
Preference number: 4 (lower is better)
Translates to: RGNNEMNYQATGIYSKSEVTQCL*CMVTQM
Trigger: CATTTGTGTAACCATGCAGCATAGGCACTGTGTTAC...CTCGGACTTGGAATAGATCCCAGTTGCCTGATAATTCATCTCATTATTGCCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR CCA 90 bp AGAGGCAATAATGAGATGAATTATCAGGCAACTGGGATCTATTCCAAGTCCGAGGAATTATCAGGCAACTaGGATCTATTCCAAGTCCGA +
Preference number: 4 (lower is better)
Translates to: RGNNEMNYQATGIYSKSEELSGN*DLFQVR
Trigger: TCGGACTTGGAATAGATCCCAGTTGCCTGATAATTC...CTCGGACTTGGAATAGATCCCAGTTGCCTGATAATTCATCTCATTATTGCCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR CCA 90 bp AGAGGCAATAATGAGATGAATTATCAGGCAACTGGGATCTATTCCAAGTCCGAGGAAAATGTGAGTTGGTaGACTGGTACTTCTTGTGCT +
Preference number: 4 (lower is better)
Translates to: RGNNEMNYQATGIYSKSEENVSW*TGTSCA
Trigger: AGCACAAGAAGTACCAGTCCACCAACTCACATTTTC...CTCGGACTTGGAATAGATCCCAGTTGCCTGATAATTCATCTCATTATTGCCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR GCA 90 bp AGAGGCAATAATGAGATGAATTATCAGGCAACTGGGATCTATTCCAAGTCCGAGACACAGTGCCTATGCTaGATGGTTACACAAATGAAA +
Preference number: 4 (lower is better)
Translates to: RGNNEMNYQATGIYSKSETQCLC*MVTQMK
Trigger: TTTCATTTGTGTAACCATGCAGCATAGGCACTGTGT...CTCGGACTTGGAATAGATCCCAGTTGCCTGATAATTCATCTCATTATTGCCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR CCA 90 bp ACCTCCTGGTTCTCTGAAACTGATTGTCTTAATCTGATTCCCAATACTTTTAAATTTCCAGGCACCATATaGATGACAGGACAGACGCCA +
Preference number: 4 (lower is better)
Translates to: TSWFSETDCLNLIPNTFKFPGTI*MTGQTP
Trigger: TGGCGTCTGTCCTGTCATCCATATGGTGCCTGGAAA...TTTAAAAGTATTGGGAATCAGATTAAGACAATCAGTTTCAGAGAACCAGGAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR GCA 90 bp AGAGGCAATAATGAGATGAATTATCAGGCAACTGGGATCTATTCCAAGTCCGAGAAAAGCACTTCTTTTTaGCAGCATTTGGCATGTCTA +
Preference number: 4 (lower is better)
Translates to: RGNNEMNYQATGIYSKSEKSTSF*QHLACL
Trigger: TAGACATGCCAAATGCTGGCAAAAAGAAGTGCTTTT...CTCGGACTTGGAATAGATCCCAGTTGCCTGATAATTCATCTCATTATTGCCTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR GCA 90 bp ACCTCCTGGTTCTCTGAAACTGATTGTCTTAATCTGATTCCCAATACTTTTAAATTTAAGCGATTCTCATaGCTCAGCCTCCTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: TSWFSETDCLNLIPNTFKFKRFS*LSLLSS
Trigger: GCTACTCAGGAGGCTGAGGCATGAGAATCGCTTAAA...TTTAAAAGTATTGGGAATCAGATTAAGACAATCAGTTTCAGAGAACCAGGAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR GCA 90 bp ACCTCCTGGTTCTCTGAAACTGATTGTCTTAATCTGATTCCCAATACTTTTAAATCACCCAGACTAGAGTaGAATGGTGTGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: TSWFSETDCLNLIPNTFKSPRLE*NGVISA
Trigger: AGCTGAGATCACACCATTGCACTCTAGTCTGGGTGA...TTTAAAAGTATTGGGAATCAGATTAAGACAATCAGTTTCAGAGAACCAGGAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR CCA 90 bp ACCTCCTGGTTCTCTGAAACTGATTGTCTTAATCTGATTCCCAATACTTTTAAACAGACTAGAGTGCAATaGTGTGATCTCAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: TSWFSETDCLNLIPNTFKQTRVQ*CDLSSL
Trigger: CAGTGAGCTGAGATCACACCATTGCACTCTAGTCTG...TTTAAAAGTATTGGGAATCAGATTAAGACAATCAGTTTCAGAGAACCAGGAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR TCA 90 bp ACCTCCTGGTTCTCTGAAACTGATTGTCTTAATCTGATTCCCAATACTTTTAAAGCATTAACAATTCAGTaGCGTAGCTGTGGATCTCTG +
Preference number: 4 (lower is better)
Translates to: TSWFSETDCLNLIPNTFKALTIQ*RSCGSL
Trigger: CAGAGATCCACAGCTACGTCACTGAATTGTTAATGC...TTTAAAAGTATTGGGAATCAGATTAAGACAATCAGTTTCAGAGAACCAGGAGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR TCA 90 bp ACCTCCTGGTTCTCTGAAACTGATTGTCTTAATCTGATTCCCAATACTTTTAAATCAGTTGGCCAAATCTaGTATATGCCCTACTTGGCT +
Preference number: 4 (lower is better)
Translates to: TSWFSETDCLNLIPNTFKSVGQI*YMPYLA
Trigger: AGCCAAGTAGGGCATATATCAGATTTGGCCAACTGA...TTTAAAAGTATTGGGAATCAGATTAAGACAATCAGTTTCAGAGAACCAGGAGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR CCA 90 bp ACCTCCTGGTTCTCTGAAACTGATTGTCTTAATCTGATTCCCAATACTTTTAAAGTTTACTGTGGAAAGTaGGGTCCCATGAAGGAAAAC +
Preference number: 4 (lower is better)
Translates to: TSWFSETDCLNLIPNTFKVYCGK*GPMKEN
Trigger: GTTTTCCTTCATGGGACCCCACTTTCCACAGTAAAC...TTTAAAAGTATTGGGAATCAGATTAAGACAATCAGTTTCAGAGAACCAGGAGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR CCA 90 bp ACCTCCTGGTTCTCTGAAACTGATTGTCTTAATCTGATTCCCAATACTTTTAAATGTGAGTTGGTGGACTaGTACTTCTTGTGCTCTGAT +
Preference number: 4 (lower is better)
Translates to: TSWFSETDCLNLIPNTFKCELVD*YFLCSD
Trigger: ATCAGAGCACAAGAAGTACCAGTCCACCAACTCACA...TTTAAAAGTATTGGGAATCAGATTAAGACAATCAGTTTCAGAGAACCAGGAGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR TCA 90 bp ACCTCCTGGTTCTCTGAAACTGATTGTCTTAATCTGATTCCCAATACTTTTAAAGAGGCAATAATGAGATaGATTATCAGGCAACTGGGA +
Preference number: 4 (lower is better)
Translates to: TSWFSETDCLNLIPNTFKEAIMR*IIRQLG
Trigger: TCCCAGTTGCCTGATAATTCATCTCATTATTGCCTC...TTTAAAAGTATTGGGAATCAGATTAAGACAATCAGTTTCAGAGAACCAGGAGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR TCA 90 bp ACCTCCTGGTTCTCTGAAACTGATTGTCTTAATCTGATTCCCAATACTTTTAAAATTTTCAATAGAGACTaGGTTTCACCATGTCGGCCA +
Preference number: 4 (lower is better)
Translates to: TSWFSETDCLNLIPNTFKIFNRD*VSPCRP
Trigger: TGGCCGACATGGTGAAACTCAGTCTCTATTGAAAAT...TTTAAAAGTATTGGGAATCAGATTAAGACAATCAGTTTCAGAGAACCAGGAGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR GCA 90 bp ACCTCCTGGTTCTCTGAAACTGATTGTCTTAATCTGATTCCCAATACTTTTAAAGCCCAGTCTCCAATTTaGTTTAGAGGCAATAATGAG +
Preference number: 4 (lower is better)
Translates to: TSWFSETDCLNLIPNTFKAQSPI*FRGNNE
Trigger: CTCATTATTGCCTCTAAAGCAAATTGGAGACTGGGC...TTTAAAAGTATTGGGAATCAGATTAAGACAATCAGTTTCAGAGAACCAGGAGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR GCA 90 bp ACCTCCTGGTTCTCTGAAACTGATTGTCTTAATCTGATTCCCAATACTTTTAAAGATGATGTAACACAGTaGCTATGCTGCATGGTTACA +
Preference number: 4 (lower is better)
Translates to: TSWFSETDCLNLIPNTFKDDVTQ*LCCMVT
Trigger: TGTAACCATGCAGCATAGGCACTGTGTTACATCATC...TTTAAAAGTATTGGGAATCAGATTAAGACAATCAGTTTCAGAGAACCAGGAGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR TCA 90 bp ACCTCCTGGTTCTCTGAAACTGATTGTCTTAATCTGATTCCCAATACTTTTAAAGCCCTACTTGGCTTGTaGAAATTTTTGAGTATCTCT +
Preference number: 4 (lower is better)
Translates to: TSWFSETDCLNLIPNTFKALLGL*KFLSIS
Trigger: AGAGATACTCAAAAATTTTCACAAGCCAAGTAGGGC...TTTAAAAGTATTGGGAATCAGATTAAGACAATCAGTTTCAGAGAACCAGGAGGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR TCA 90 bp ACCTCCTGGTTCTCTGAAACTGATTGTCTTAATCTGATTCCCAATACTTTTAAACTTCACATGCCTGGCTaGAACTTATGTTTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: TSWFSETDCLNLIPNTFKLHMPG*NLCFLF
Trigger: GAAAAGAAAACATAAGTTTCAGCCAGGCATGTGAAG...TTTAAAAGTATTGGGAATCAGATTAAGACAATCAGTTTCAGAGAACCAGGAGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000621663.4
CDS-3UTR TCA 90 bp ACCTCCTGGTTCTCTGAAACTGATTGTCTTAATCTGATTCCCAATACTTTTAAAAAATCCCTGAGATTTTaGAAGGATAATGCCACCAAT +
Preference number: 4 (lower is better)
Translates to: TSWFSETDCLNLIPNTFKKSLRF*KDNATN
Trigger: ATTGGTGGCATTATCCTTTCAAAATCTCAGGGATTT...TTTAAAAGTATTGGGAATCAGATTAAGACAATCAGTTTCAGAGAACCAGGAGGT
36% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR GCA 90 bp ACCTCCTGGTTCTCTGAAACTGATTGTCTTAATCTGATTCCCAATACTTTTAAAAAAAGCACTTCTTTTTaGCAGCATTTGGCATGTCTA +
Preference number: 4 (lower is better)
Translates to: TSWFSETDCLNLIPNTFKKSTSF*QHLACL
Trigger: TAGACATGCCAAATGCTGGCAAAAAGAAGTGCTTTT...TTTAAAAGTATTGGGAATCAGATTAAGACAATCAGTTTCAGAGAACCAGGAGGT
36% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR CCA 90 bp ACCTCCTGGTTCTCTGAAACTGATTGTCTTAATCTGATTCCCAATACTTTTAAACTTTTTGCCAGCATTTaGCATGTCTATAAGAGGTTA +
Preference number: 4 (lower is better)
Translates to: TSWFSETDCLNLIPNTFKLFASI*HVYKRL
Trigger: TAACCTCTTATAGACATGCCAAATGCTGGCAAAAAG...TTTAAAAGTATTGGGAATCAGATTAAGACAATCAGTTTCAGAGAACCAGGAGGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR CCA 90 bp ACCTCCTGGTTCTCTGAAACTGATTGTCTTAATCTGATTCCCAATACTTTTAAAATAGAAAATGTGAGTTaGTGGACTGGTACTTCTTGT +
Preference number: 4 (lower is better)
Translates to: TSWFSETDCLNLIPNTFKIENVS*WTGTSC
Trigger: ACAAGAAGTACCAGTCCACCAACTCACATTTTCTAT...TTTAAAAGTATTGGGAATCAGATTAAGACAATCAGTTTCAGAGAACCAGGAGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS GCA 90 bp GTTGCCCAGGCTGGAAATGGCGCGATCTCGGCTCACAGCAACCTCTaGCTCCCGGATTTAAGCGATTCTCCTGCTTCAGCCTCCCGAGTA +
Preference number: 5 (lower is better)
Translates to: VAQAGNGAISAHSNL*LPDLSDSPASASRV
Trigger: TACTCGGGAGGCTGAAGCAGGAGAATCGCTTAAATCCGGGAGGCAGAGGTTGCTGTGAGCCGAGATCGCGCCATTTCCAGCCTGGGCAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621663.4
CDS TCA 90 bp GTGAGAAAGTCCCCCACTGGCTTTGCACTTGCTGCGCACCAGAGGTaGCCATCCAGGCAGTATCAACCTGAAGAGGGGGTGAATCCCAGC +
Preference number: 5 (lower is better)
Translates to: VRKSPTGFALAAHQR*PSRQYQPEEGVNPS
Trigger: GCTGGGATTCACCCCCTCTTCAGGTTGATACTGCCTGGATGGTCACCTCTGGTGCGCAGCAAGTGCAAAGCCAGTGGGGGACTTTCTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000299381.5
ENST00000470481.2
ENST00000478193.5
ENST00000615507.4
ENST00000621663.4
CDS GCA 90 bp CCATCCAGGCAGTATCAACCTGAAGAGGGGGTGAATCCCAGCAGCTaGTCGATGGGCTTAAACCGCCACTCGTCAGCCTCCAGCTCTTCT +
Preference number: 5 (lower is better)
Translates to: PSRQYQPEEGVNPSS*SMGLNRHSSASSSS
Trigger: AGAAGAGCTGGAGGCTGACGAGTGGCGGTTTAAGCCCATCGAGCAGCTGCTGGGATTCACCCCCTCTTCAGGTTGATACTGCCTGGATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000299381.5
ENST00000470481.2
ENST00000478193.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR CAA 90 bp GGCTATGTAAGCTGTGAGAAAGTCCCCCACTGGCTTTGCACTTGCTGCGCACCACCACTGGCTTTGCACTaGCTGCGCACCAGAGGTGAC +
Preference number: 5 (lower is better)
Translates to: GYVSCEKVPHWLCTCCAPPLALH*LRTRGD
Trigger: GTCACCTCTGGTGCGCAGCAAGTGCAAAGCCAGTGG...TGGTGCGCAGCAAGTGCAAAGCCAGTGGGGGACTTTCTCACAGCTTACATAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR CAA 90 bp GCTCAGGCTCTTAACCGACTGAATGAGGTCACCACCTCCCGTCAGGTAGAATGTCCACTGGCTTTGCACTaGCTGCGCACCAGAGGTGAC +
Preference number: 5 (lower is better)
Translates to: AQALNRLNEVTTSRQVECPLALH*LRTRGD
Trigger: GTCACCTCTGGTGCGCAGCAAGTGCAAAGCCAGTGG...ACATTCTACCTGACGGGAGGTGGTGACCTCATTCAGTCGGTTAAGAGCCTGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS GCA 90 bp TCTCTGGATGGCTATGTAAGCTGTGAGAAAGTCCCCCACTGGCTTTaGACTTGCTGCGCACCAGAGGTGACCATCCAGGCAGTATCAACC +
Preference number: 5 (lower is better)
Translates to: SLDGYVSCEKVPHWL*TCCAPEVTIQAVST
Trigger: GGTTGATACTGCCTGGATGGTCACCTCTGGTGCGCAGCAAGTGCAAAGCCAGTGGGGGACTTTCTCACAGCTTACATAGCCATCCAGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000299381.5
ENST00000470481.2
ENST00000478193.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR CAA 90 bp GGCTATGTAAGCTGTGAGAAAGTCCCCCACTGGCTTTGCACTTGCTGCGCACCAGGTATAAAAACTTACTaGAGGCCAGGCGCGGTGGCT +
Preference number: 5 (lower is better)
Translates to: GYVSCEKVPHWLCTCCAPGIKTY*RPGAVA
Trigger: AGCCACCGCGCCTGGCCTCAAGTAAGTTTTTATACC...TGGTGCGCAGCAAGTGCAAAGCCAGTGGGGGACTTTCTCACAGCTTACATAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR CAA 90 bp GCTCAGGCTCTTAACCGACTGAATGAGGTCACCACCTCCCGTCAGGTAGAATGTGGTATAAAAACTTACTaGAGGCCAGGCGCGGTGGCT +
Preference number: 5 (lower is better)
Translates to: AQALNRLNEVTTSRQVECGIKTY*RPGAVA
Trigger: AGCCACCGCGCCTGGCCTCAAGTAAGTTTTTATACC...ACATTCTACCTGACGGGAGGTGGTGACCTCATTCAGTCGGTTAAGAGCCTGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR CAA 90 bp CACAGGGCTCAGGCTCTTAACCGACTGAATGAGGTCACCACCTCCCGTCAGGTAACAGACGCCATTCAGTaGGCCAAATCTGATATATGC +
Preference number: 5 (lower is better)
Translates to: HRAQALNRLNEVTTSRQVTDAIQ*AKSDIC
Trigger: GCATATATCAGATTTGGCCAACTGAATGGCGTCTGT...TACCTGACGGGAGGTGGTGACCTCATTCAGTCGGTTAAGAGCCTGAGCCCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR CAA 90 bp GGCTATGTAAGCTGTGAGAAAGTCCCCCACTGGCTTTGCACTTGCTGCGCACCAATGCTGACCTTGACCTaGACTGGTAAATATTTCCAG +
Preference number: 5 (lower is better)
Translates to: GYVSCEKVPHWLCTCCAPMLTLT*TGKYFQ
Trigger: CTGGAAATATTTACCAGTCAAGGTCAAGGTCAGCAT...TGGTGCGCAGCAAGTGCAAAGCCAGTGGGGGACTTTCTCACAGCTTACATAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR CAA 90 bp GCTCAGGCTCTTAACCGACTGAATGAGGTCACCACCTCCCGTCAGGTAGAATGTCCACAGATGCTGACCTaGACCTTGACTGGTAAATAT +
Preference number: 5 (lower is better)
Translates to: AQALNRLNEVTTSRQVECPQMLT*TLTGKY
Trigger: ATATTTACCAGTCAAGGTCAAGGTCAGCATCTGTGG...ACATTCTACCTGACGGGAGGTGGTGACCTCATTCAGTCGGTTAAGAGCCTGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR CAA 90 bp CACAGGGCTCAGGCTCTTAACCGACTGAATGAGGTCACCACCTCCCGTCAGGTAGATAATGCCACCAATTaGGAGCTCTTTCAAAGGATT +
Preference number: 5 (lower is better)
Translates to: HRAQALNRLNEVTTSRQVDNATN*ELFQRI
Trigger: AATCCTTTGAAAGAGCTCCAAATTGGTGGCATTATC...TACCTGACGGGAGGTGGTGACCTCATTCAGTCGGTTAAGAGCCTGAGCCCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR CAA 90 bp GGCTATGTAAGCTGTGAGAAAGTCCCCCACTGGCTTTGCACTTGCTGCGCACCAAAAAAGCACTTCTTTTaGCCAGCATTTGGCATGTCT +
Preference number: 5 (lower is better)
Translates to: GYVSCEKVPHWLCTCCAPKKHFF*PAFGMS
Trigger: AGACATGCCAAATGCTGGCAAAAAGAAGTGCTTTTT...TGGTGCGCAGCAAGTGCAAAGCCAGTGGGGGACTTTCTCACAGCTTACATAGCC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR CAA 90 bp GGCTATGTAAGCTGTGAGAAAGTCCCCCACTGGCTTTGCACTTGCTGCGCACCATATAGAAAATGTGAGTaGGTGGACTGGTACTTCTTG +
Preference number: 5 (lower is better)
Translates to: GYVSCEKVPHWLCTCCAPYRKCE*VDWYFL
Trigger: CAAGAAGTACCAGTCCACCAACTCACATTTTCTATA...TGGTGCGCAGCAAGTGCAAAGCCAGTGGGGGACTTTCTCACAGCTTACATAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR CAA 90 bp GCTCAGGCTCTTAACCGACTGAATGAGGTCACCACCTCCCGTCAGGTAGAATGTAAAAAGCACTTCTTTTaGCCAGCATTTGGCATGTCT +
Preference number: 5 (lower is better)
Translates to: AQALNRLNEVTTSRQVECKKHFF*PAFGMS
Trigger: AGACATGCCAAATGCTGGCAAAAAGAAGTGCTTTTT...ACATTCTACCTGACGGGAGGTGGTGACCTCATTCAGTCGGTTAAGAGCCTGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR CAA 90 bp GCTCAGGCTCTTAACCGACTGAATGAGGTCACCACCTCCCGTCAGGTAGAATGTGATAATGCCACCAATTaGGAGCTCTTTCAAAGGATT +
Preference number: 5 (lower is better)
Translates to: AQALNRLNEVTTSRQVECDNATN*ELFQRI
Trigger: AATCCTTTGAAAGAGCTCCAAATTGGTGGCATTATC...ACATTCTACCTGACGGGAGGTGGTGACCTCATTCAGTCGGTTAAGAGCCTGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR CAA 90 bp AGAGGCAATAATGAGATGAATTATCAGGCAACTGGGATCTATTCCAAGTCCGAGAGGCAGGAGAATTGCTaGAACCTGGGAGGTGGATGT +
Preference number: 5 (lower is better)
Translates to: RGNNEMNYQATGIYSKSERQENC*NLGGGC
Trigger: ACATCCACCTCCCAGGTTCAAGCAATTCTCCTGCCT...CTCGGACTTGGAATAGATCCCAGTTGCCTGATAATTCATCTCATTATTGCCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS GCA 90 bp CATCCGAGCAACTTGCTGATCATGTTTCACCTGTTTAAGCGTGGATaGCACTTGATAGCTAAAAACAGATTCGCAGAGGAATCTCTCAGA +
Preference number: 5 (lower is better)
Translates to: HPSNLLIMFHLFKRG*HLIAKNRFAEESLR
Trigger: TCTGAGAGATTCCTCTGCGAATCTGTTTTTAGCTATCAAGTGGCATCCACGCTTAAACAGGTGAAACATGATCAGCAAGTTGCTCGGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299381.5
ENST00000470481.2
ENST00000478193.5
ENST00000621663.4
CDS-3UTR CAA 90 bp AGAGGCAATAATGAGATGAATTATCAGGCAACTGGGATCTATTCCAAGTCCGAGTTCCATCCGAGCAACTaGCTGATCATGTTTCACCTG +
Preference number: 5 (lower is better)
Translates to: RGNNEMNYQATGIYSKSEFHPSN*LIMFHL
Trigger: CAGGTGAAACATGATCAGCAAGTTGCTCGGATGGAA...CTCGGACTTGGAATAGATCCCAGTTGCCTGATAATTCATCTCATTATTGCCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299381.5
ENST00000621663.4
CDS-3UTR CAA 90 bp AGAGGCAATAATGAGATGAATTATCAGGCAACTGGGATCTATTCCAAGTCCGAGACAGACGCCATTCAGTaGGCCAAATCTGATATATGC +
Preference number: 5 (lower is better)
Translates to: RGNNEMNYQATGIYSKSETDAIQ*AKSDIC
Trigger: GCATATATCAGATTTGGCCAACTGAATGGCGTCTGT...CTCGGACTTGGAATAGATCCCAGTTGCCTGATAATTCATCTCATTATTGCCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR CAA 90 bp AGAGGCAATAATGAGATGAATTATCAGGCAACTGGGATCTATTCCAAGTCCGAGAAGCGTGGATGCCACTaGATAGCTAAAAACAGATTC +
Preference number: 5 (lower is better)
Translates to: RGNNEMNYQATGIYSKSEKRGCH*IAKNRF
Trigger: GAATCTGTTTTTAGCTATCAAGTGGCATCCACGCTT...CTCGGACTTGGAATAGATCCCAGTTGCCTGATAATTCATCTCATTATTGCCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299381.5
ENST00000621663.4
CDS-3UTR CAA 90 bp ACCTCCTGGTTCTCTGAAACTGATTGTCTTAATCTGATTCCCAATACTTTTAAAAGGCAGGAGAATTGCTaGAACCTGGGAGGTGGATGT +
Preference number: 5 (lower is better)
Translates to: TSWFSETDCLNLIPNTFKRQENC*NLGGGC
Trigger: ACATCCACCTCCCAGGTTCAAGCAATTCTCCTGCCT...TTTAAAAGTATTGGGAATCAGATTAAGACAATCAGTTTCAGAGAACCAGGAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR CAA 90 bp AGAGGCAATAATGAGATGAATTATCAGGCAACTGGGATCTATTCCAAGTCCGAGTATAGAAAATGTGAGTaGGTGGACTGGTACTTCTTG +
Preference number: 5 (lower is better)
Translates to: RGNNEMNYQATGIYSKSEYRKCE*VDWYFL
Trigger: CAAGAAGTACCAGTCCACCAACTCACATTTTCTATA...CTCGGACTTGGAATAGATCCCAGTTGCCTGATAATTCATCTCATTATTGCCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR CAA 90 bp ACCTCCTGGTTCTCTGAAACTGATTGTCTTAATCTGATTCCCAATACTTTTAAAACAGACGCCATTCAGTaGGCCAAATCTGATATATGC +
Preference number: 5 (lower is better)
Translates to: TSWFSETDCLNLIPNTFKTDAIQ*AKSDIC
Trigger: GCATATATCAGATTTGGCCAACTGAATGGCGTCTGT...TTTAAAAGTATTGGGAATCAGATTAAGACAATCAGTTTCAGAGAACCAGGAGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR CAA 90 bp ACCTCCTGGTTCTCTGAAACTGATTGTCTTAATCTGATTCCCAATACTTTTAAACCACAGATGCTGACCTaGACCTTGACTGGTAAATAT +
Preference number: 5 (lower is better)
Translates to: TSWFSETDCLNLIPNTFKPQMLT*TLTGKY
Trigger: ATATTTACCAGTCAAGGTCAAGGTCAGCATCTGTGG...TTTAAAAGTATTGGGAATCAGATTAAGACAATCAGTTTCAGAGAACCAGGAGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR CAA 90 bp ACCTCCTGGTTCTCTGAAACTGATTGTCTTAATCTGATTCCCAATACTTTTAAAAAGCGTGGATGCCACTaGATAGCTAAAAACAGATTC +
Preference number: 5 (lower is better)
Translates to: TSWFSETDCLNLIPNTFKKRGCH*IAKNRF
Trigger: GAATCTGTTTTTAGCTATCAAGTGGCATCCACGCTT...TTTAAAAGTATTGGGAATCAGATTAAGACAATCAGTTTCAGAGAACCAGGAGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000299381.5
ENST00000621663.4
CDS-3UTR CAA 90 bp ACCTCCTGGTTCTCTGAAACTGATTGTCTTAATCTGATTCCCAATACTTTTAAAATGCTGACCTTGACCTaGACTGGTAAATATTTCCAG +
Preference number: 5 (lower is better)
Translates to: TSWFSETDCLNLIPNTFKMLTLT*TGKYFQ
Trigger: CTGGAAATATTTACCAGTCAAGGTCAAGGTCAGCAT...TTTAAAAGTATTGGGAATCAGATTAAGACAATCAGTTTCAGAGAACCAGGAGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS-3UTR CAA 90 bp ACCTCCTGGTTCTCTGAAACTGATTGTCTTAATCTGATTCCCAATACTTTTAAAAAGCCAGTCTACCATTaGTTTAGGAGAGATGGTTTT +
Preference number: 5 (lower is better)
Translates to: TSWFSETDCLNLIPNTFKKPVYH*FRRDGF
Trigger: AAAACCATCTCTCCTAAACAAATGGTAGACTGGCTT...TTTAAAAGTATTGGGAATCAGATTAAGACAATCAGTTTCAGAGAACCAGGAGGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299381.5
ENST00000615507.4
ENST00000621663.4
CDS GCA 72 bp CAGTATCAACCTGAAGAGGGGGTGAATCCCAGCAGCTaGTCGATGGGCTTAAACCGCCACTCGTCAGCCTCC +
Preference number: 6 (lower is better)
Translates to: QYQPEEGVNPSS*SMGLNRHSSAS
Trigger: GGAGGCTGACGAGTGGCGGTTTAAGCCCATCGAGCAGCTGCTGGGATTCACCCCCTCTTCAGGTTGATACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000299381.5
ENST00000470481.2
ENST00000478193.5
ENST00000615507.4
ENST00000621663.4
CDS GCA 72 bp AGCTGTGAGAAAGTCCCCCACTGGCTTTGCACTTGCTaGGCACCAGAGGTGACCATCCAGGCAGTATCAACC +
Preference number: 6 (lower is better)
Translates to: SCEKVPHWLCTC*APEVTIQAVST
Trigger: GGTTGATACTGCCTGGATGGTCACCTCTGGTGCGCAGCAAGTGCAAAGCCAGTGGGGGACTTTCTCACAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000299381.5
ENST00000470481.2
ENST00000478193.5
ENST00000615507.4
ENST00000621663.4
CDS GCA 72 bp GTAAGCTGTGAGAAAGTCCCCCACTGGCTTTGCACTTaGTGCGCACCAGAGGTGACCATCCAGGCAGTATCA +
Preference number: 6 (lower is better)
Translates to: VSCEKVPHWLCT*CAPEVTIQAVS
Trigger: TGATACTGCCTGGATGGTCACCTCTGGTGCGCAGCAAGTGCAAAGCCAGTGGGGGACTTTCTCACAGCTTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000299381.5
ENST00000470481.2
ENST00000478193.5
ENST00000615507.4
ENST00000621663.4
CDS CAA 90 bp AGCAACTTGCTGATCATGTTTCACCTGTTTAAGCGTGGATGCCACTaGATAGCTAAAAACAGATTCGCAGAGGAATCTCTCAGAGCCATC +
Preference number: 6 (lower is better)
Translates to: SNLLIMFHLFKRGCH*IAKNRFAEESLRAI
Trigger: GATGGCTCTGAGAGATTCCTCTGCGAATCTGTTTTTAGCTATCAAGTGGCATCCACGCTTAAACAGGTGAAACATGATCAGCAAGTTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299381.5
ENST00000470481.2
ENST00000478193.5
ENST00000621663.4
CDS CAA 72 bp CTGATCATGTTTCACCTGTTTAAGCGTGGATGCCACTaGATAGCTAAAAACAGATTCGCAGAGGAATCTCTC +
Preference number: 6 (lower is better)
Translates to: LIMFHLFKRGCH*IAKNRFAEESL
Trigger: GAGAGATTCCTCTGCGAATCTGTTTTTAGCTATCAAGTGGCATCCACGCTTAAACAGGTGAAACATGATCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299381.5
ENST00000470481.2
ENST00000478193.5
ENST00000621663.4
CDS TCA 72 bp AGCGAACTGTTTATGTCAACTAAGATTGACTGTGGGTaGTTTATGAGTTATGAAGGGGTGATATGGCAGTGC +
Preference number: 6 (lower is better)
Translates to: SELFMSTKIDCG*FMSYEGVIWQC
Trigger: GCACTGCCATATCACCCCTTCATAACTCATAAATCACCCACAGTCAATCTTAGTTGACATAAACAGTTCGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470481.2
CDS GCA 72 bp AACTTGCTGATCATGTTTCACCTGTTTAAGCGTGGATaGCACTTGATAGCTAAAAACAGATTCGCAGAGGAA +
Preference number: 6 (lower is better)
Translates to: NLLIMFHLFKRG*HLIAKNRFAEE
Trigger: TTCCTCTGCGAATCTGTTTTTAGCTATCAAGTGGCATCCACGCTTAAACAGGTGAAACATGATCAGCAAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299381.5
ENST00000470481.2
ENST00000478193.5
ENST00000621663.4