Pregenerated sensors for AMY2B (Homo sapiens)
Ensembl gene IDs: ENSG00000240038Ensembl transcript IDs: ENST00000435302.5, ENST00000453959.5, ENST00000491397.1
Found 16 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | TGGGAGGTCCTGGAACCAATCCCCCACAGATACTGGAGAGATGACTaGAAAAGGCTTGGTACTATCTGTGGTTTCAGGCACCTGCTGGGG | + |
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Preference number: 5 (lower is better) Translates to: WEVLEPIPHRYWRDD*KRLGTICGFRHLLG Trigger: CCCCAGCAGGTGCCTGAAACCACAGATAGTACCAAGCCTTTTGCAGTCATCTCTCCAGTATCTGTGGGGGATTGGTTCCAGGACCTCCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000453959.5 |
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| CDS GCA 90 bp | GCTCAGAATTTCTCCTTCCTGCCATCAAGTGAAGAAGGATGGGTTTaGTTCCCCTTCCACCATGATTGTACATTTCCTGAGGCTTCCTCA | + |
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Preference number: 5 (lower is better) Translates to: AQNFSFLPSSEEGWV*FPFHHDCTFPEASS Trigger: TGAGGAAGCCTCAGGAAATGTACAATCATGGTGGAAGGGGAAGCAAACCCATCCTTCTTCACTTGATGGCAGGAAGGAGAAATTCTGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000491397.1 |
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| CDS CCA 90 bp | CCTTTTGCTCAGAATTTCTCCTTCCTGCCATCAAGTGAAGAAGGATaGGTTTGCTTCCCCTTCCACCATGATTGTACATTTCCTGAGGCT | + |
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Preference number: 5 (lower is better) Translates to: PFAQNFSFLPSSEEG*VCFPFHHDCTFPEA Trigger: AGCCTCAGGAAATGTACAATCATGGTGGAAGGGGAAGCAAACCCATCCTTCTTCACTTGATGGCAGGAAGGAGAAATTCTGAGCAAAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000491397.1 |
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| CDS TCA 90 bp | GATTTGTACAAGGAATCTTCTCTGAACTCCAGTATTACAACAGGTTaGTCACCACACTCCTGTTTCCTAAGCAAACCACTGTCTTCTCTC | + |
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Preference number: 5 (lower is better) Translates to: DLYKESSLNSSITTG*SPHSCFLSKPLSSL Trigger: GAGAGAAGACAGTGGTTTGCTTAGGAAACAGGAGTGTGGTGATCAACCTGTTGTAATACTGGAGTTCAGAGAAGATTCCTTGTACAAATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000435302.5 |
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| CDS TCA 90 bp | TCCTACTCCAATTCTCCAAATCAGATTTGTACAAGGAATCTTCTCTaGACTCCAGTATTACAACAGGTTGATCACCACACTCCTGTTTCC | + |
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Preference number: 5 (lower is better) Translates to: SYSNSPNQICTRNLL*TPVLQQVDHHTPVS Trigger: GGAAACAGGAGTGTGGTGATCAACCTGTTGTAATACTGGAGTTCAGAGAAGATTCCTTGTACAAATCTGATTTGGAGAATTGGAGTAGGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000435302.5 |
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| CDS CCA 90 bp | TCTGTGTGTGTGTGCGTGTGTGTATATATGTATATATGTATGGTTTaGCTGTGTCCCCACCCAAATCTCATCTTGAATGTAGTTCCCATA | + |
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Preference number: 5 (lower is better) Translates to: SVCVCVCVYMYICMV*LCPHPNLILNVVPI Trigger: TATGGGAACTACATTCAAGATGAGATTTGGGTGGGGACACAGCCAAACCATACATATATACATATATACACACACGCACACACACACAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000491397.1 |
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| CDS CCA 90 bp | CCCTTCCACCATGATTGTACATTTCCTGAGGCTTCCTCAGTCATGTaGAACTGTGAGTGGATTGAATCTTTTTCCTTTATATATTACTCA | + |
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Preference number: 5 (lower is better) Translates to: PFHHDCTFPEASSVM*NCEWIESFSFIYYS Trigger: TGAGTAATATATAAAGGAAAAAGATTCAATCCACTCACAGTTCCACATGACTGAGGAAGCCTCAGGAAATGTACAATCATGGTGGAAGGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000491397.1 |
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| CDS CAA 72 bp | TCCCCCACAGATACTGGAGAGATGACTGCAAAAGGCTaGGTACTATCTGTGGTTTCAGGCACCTGCTGGGGG | + |
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Preference number: 6 (lower is better) Translates to: SPTDTGEMTAKG*VLSVVSGTCWG Trigger: CCCCCAGCAGGTGCCTGAAACCACAGATAGTACCAAGCCTTTTGCAGTCATCTCTCCAGTATCTGTGGGGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000453959.5 |
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| CDS CCA 72 bp | CCATGGGAGGTCCTGGAACCAATCCCCCACAGATACTaGAGAGATGACTGCAAAAGGCTTGGTACTATCTGT | + |
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Preference number: 6 (lower is better) Translates to: PWEVLEPIPHRY*RDDCKRLGTIC Trigger: ACAGATAGTACCAAGCCTTTTGCAGTCATCTCTCCAGTATCTGTGGGGGATTGGTTCCAGGACCTCCCATGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000453959.5 |
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| CDS GCA 72 bp | TTCTCCTTCCTGCCATCAAGTGAAGAAGGATGGGTTTaGTTCCCCTTCCACCATGATTGTACATTTCCTGAG | + |
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Preference number: 6 (lower is better) Translates to: FSFLPSSEEGWV*FPFHHDCTFPE Trigger: CTCAGGAAATGTACAATCATGGTGGAAGGGGAAGCAAACCCATCCTTCTTCACTTGATGGCAGGAAGGAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000491397.1 |
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| CDS CCA 72 bp | CAGAATTTCTCCTTCCTGCCATCAAGTGAAGAAGGATaGGTTTGCTTCCCCTTCCACCATGATTGTACATTT | + |
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Preference number: 6 (lower is better) Translates to: QNFSFLPSSEEG*VCFPFHHDCTF Trigger: AAATGTACAATCATGGTGGAAGGGGAAGCAAACCCATCCTTCTTCACTTGATGGCAGGAAGGAGAAATTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000491397.1 |
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| CDS TCA 72 bp | AAGGAATCTTCTCTGAACTCCAGTATTACAACAGGTTaGTCACCACACTCCTGTTTCCTAAGCAAACCACTG | + |
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Preference number: 6 (lower is better) Translates to: KESSLNSSITTG*SPHSCFLSKPL Trigger: CAGTGGTTTGCTTAGGAAACAGGAGTGTGGTGATCAACCTGTTGTAATACTGGAGTTCAGAGAAGATTCCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000435302.5 |
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| CDS CAA 90 bp | AGATTTGTACAAGGAATCTTCTCTGAACTCCAGTATTACAACAGGTaGATCACCACACTCCTGTTTCCTAAGCAAACCACTGTCTTCTCT | + |
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Preference number: 6 (lower is better) Translates to: RFVQGIFSELQYYNR*ITTLLFPKQTTVFS Trigger: AGAGAAGACAGTGGTTTGCTTAGGAAACAGGAGTGTGGTGATCAACCTGTTGTAATACTGGAGTTCAGAGAAGATTCCTTGTACAAATCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000435302.5 |
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| CDS CAA 90 bp | GTACATTTCCTGAGGCTTCCTCAGTCATGTGGAACTGTGAGTGGATaGAATCTTTTTCCTTTATATATTACTCAGTCTTGGACACTTCTT | + |
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Preference number: 6 (lower is better) Translates to: VHFLRLPQSCGTVSG*NLFPLYITQSWTLL Trigger: AAGAAGTGTCCAAGACTGAGTAATATATAAAGGAAAAAGATTCAATCCACTCACAGTTCCACATGACTGAGGAAGCCTCAGGAAATGTAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000491397.1 |
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| CDS CCA 72 bp | CATGATTGTACATTTCCTGAGGCTTCCTCAGTCATGTaGAACTGTGAGTGGATTGAATCTTTTTCCTTTATA | + |
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Preference number: 6 (lower is better) Translates to: HDCTFPEASSVM*NCEWIESFSFI Trigger: TATAAAGGAAAAAGATTCAATCCACTCACAGTTCCACATGACTGAGGAAGCCTCAGGAAATGTACAATCATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000491397.1 |
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| CDS TCA 72 bp | AATTCTCCAAATCAGATTTGTACAAGGAATCTTCTCTaGACTCCAGTATTACAACAGGTTGATCACCACACT | + |
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Preference number: 6 (lower is better) Translates to: NSPNQICTRNLL*TPVLQQVDHHT Trigger: AGTGTGGTGATCAACCTGTTGTAATACTGGAGTTCAGAGAAGATTCCTTGTACAAATCTGATTTGGAGAATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000435302.5 |
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