Pregenerated sensors for AMTN (Homo sapiens)
Ensembl gene IDs: ENSG00000187689Ensembl transcript IDs: ENST00000339336.9, ENST00000504451.1
Found 27 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | TGCAAAGTCGTCATCTGTGCCACTGGGAGTTGGGAGGCGGCCTGCTaGGGTTCCCTGGGTGGCAGGATTTACACCTGCTCCTCCTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: CKVVICATGSWEAAC*GSLGGRIYTCSSCW Trigger: CCAGCAGGAGGAGCAGGTGTAAATCCTGCCACCCAGGGAACCCCAGCAGGCCGCCTCCCAACTCCCAGTGGCACAGATGACGACTTTGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000339336.9 ENST00000504451.1 |
||
| CDS GCA 90 bp | CTCGATGGCATGTGTGCTCCTTTGGATGCCTGCAGGGGTGGTCACTaGAAAGTCGTCATCTGTGCCACTGGGAGTTGGGAGGCGGCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LDGMCAPLDACRGGH*KVVICATGSWEAAC Trigger: GCAGGCCGCCTCCCAACTCCCAGTGGCACAGATGACGACTTTGCAGTGACCACCCCTGCAGGCATCCAAAGGAGCACACATGCCATCGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000339336.9 ENST00000504451.1 |
||
| CDS TCA 90 bp | CCTGCTGGAAGGCTTCCATCCTGGACATCTGGATTAGCCCCTGCCTaGCTGGTGGGCAGGATGCCTCCCGGGAACAAGGAATGGATGATG | + |
|
Preference number: 5 (lower is better) Translates to: PAGRLPSWTSGLAPA*LVGRMPPGNKEWMM Trigger: CATCATCCATTCCTTGTTCCCGGGAGGCATCCTGCCCACCAGTCAGGCAGGGGCTAATCCAGATGTCCAGGATGGAAGCCTTCCAGCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000339336.9 ENST00000504451.1 |
||
| CDS CCA 90 bp | TGCTGGGGTTCCCTGGGTGGCAGGATTTACACCTGCTCCTCCTGCTaGAAGGCTTCCATCCTGGACATCTGGATTAGCCCCTGCCTGACT | + |
|
Preference number: 5 (lower is better) Translates to: CWGSLGGRIYTCSSC*KASILDIWISPCLT Trigger: AGTCAGGCAGGGGCTAATCCAGATGTCCAGGATGGAAGCCTTCCAGCAGGAGGAGCAGGTGTAAATCCTGCCACCCAGGGAACCCCAGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000339336.9 ENST00000504451.1 |
||
| CDS CCA 90 bp | TGGCTTCCTCGATGGCATGTGTGCTCCTTTGGATGCCTGCAGGGGTaGTCACTGCAAAGTCGTCATCTGTGCCACTGGGAGTTGGGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: WLPRWHVCSFGCLQG*SLQSRHLCHWELGG Trigger: GCCTCCCAACTCCCAGTGGCACAGATGACGACTTTGCAGTGACCACCCCTGCAGGCATCCAAAGGAGCACACATGCCATCGAGGAAGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000339336.9 ENST00000504451.1 |
||
| CDS GCA 90 bp | TTCTGTGGTGGCTTCCTCGATGGCATGTGTGCTCCTTTGGATGCCTaGAGGGGTGGTCACTGCAAAGTCGTCATCTGTGCCACTGGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: FCGGFLDGMCAPLDA*RGGHCKVVICATGS Trigger: ACTCCCAGTGGCACAGATGACGACTTTGCAGTGACCACCCCTGCAGGCATCCAAAGGAGCACACATGCCATCGAGGAAGCCACCACAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000339336.9 ENST00000504451.1 |
||
| CDS GCA 90 bp | CTGATTCTGTGGTGGCTTCCTCGATGGCATGTGTGCTCCTTTGGATaGCTGCAGGGGTGGTCACTGCAAAGTCGTCATCTGTGCCACTGG | + |
|
Preference number: 5 (lower is better) Translates to: LILWWLPRWHVCSFG*LQGWSLQSRHLCHW Trigger: CCAGTGGCACAGATGACGACTTTGCAGTGACCACCCCTGCAGGCATCCAAAGGAGCACACATGCCATCGAGGAAGCCACCACAGAATCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000339336.9 ENST00000504451.1 |
||
| CDS CCA 90 bp | TTTGCTGATTCTGTGGTGGCTTCCTCGATGGCATGTGTGCTCCTTTaGATGCCTGCAGGGGTGGTCACTGCAAAGTCGTCATCTGTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: FADSVVASSMACVLL*MPAGVVTAKSSSVP Trigger: TGGCACAGATGACGACTTTGCAGTGACCACCCCTGCAGGCATCCAAAGGAGCACACATGCCATCGAGGAAGCCACCACAGAATCAGCAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000339336.9 ENST00000504451.1 |
||
| CDS CCA 90 bp | GGGTGCAGTTGCTGTTGTACATTCAACCCTCCCAGGGTCAATGGGTaGGTCTGGGTACCAGGTGTCATTCCTGCAGCAGGATTTAACAGA | + |
|
Preference number: 5 (lower is better) Translates to: GCSCCCTFNPPRVNG*VWVPGVIPAAGFNR Trigger: TCTGTTAAATCCTGCTGCAGGAATGACACCTGGTACCCAGACCCACCCATTGACCCTGGGAGGGTTGAATGTACAACAGCAACTGCACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000339336.9 ENST00000504451.1 |
||
| CDS GCA 90 bp | GAATTCCATTTGCTGATTCTGTGGTGGCTTCCTCGATGGCATGTGTaGTCCTTTGGATGCCTGCAGGGGTGGTCACTGCAAAGTCGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: EFHLLILWWLPRWHV*SFGCLQGWSLQSRH Trigger: ATGACGACTTTGCAGTGACCACCCCTGCAGGCATCCAAAGGAGCACACATGCCATCGAGGAAGCCACCACAGAATCAGCAAATGGAATTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000339336.9 ENST00000504451.1 |
||
| CDS CCA 90 bp | CAGCTTACTGAATTCCATTTGCTGATTCTGTGGTGGCTTCCTCGATaGCATGTGTGCTCCTTTGGATGCCTGCAGGGGTGGTCACTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: QLTEFHLLILWWLPR*HVCSFGCLQGWSLQ Trigger: TTGCAGTGACCACCCCTGCAGGCATCCAAAGGAGCACACATGCCATCGAGGAAGCCACCACAGAATCAGCAAATGGAATTCAGTAAGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000339336.9 ENST00000504451.1 |
||
| CDS CCA 90 bp | AGTTGCTGTTGTACATTCAACCCTCCCAGGGTCAATGGGTGGGTCTaGGTACCAGGTGTCATTCCTGCAGCAGGATTTAACAGATGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: SCCCTFNPPRVNGWV*VPGVIPAAGFNRCR Trigger: TCTGCATCTGTTAAATCCTGCTGCAGGAATGACACCTGGTACCCAGACCCACCCATTGACCCTGGGAGGGTTGAATGTACAACAGCAACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000339336.9 ENST00000504451.1 |
||
| CDS TCA 90 bp | TCATTCCTGCAGCAGGATTTAACAGATGCAGATCTGGCCCCAGTGTaGGCATCTGTGTTAATGGTATCAGACTTAAAGAAGGAAAGACCT | + |
|
Preference number: 5 (lower is better) Translates to: SFLQQDLTDADLAPV*ASVLMVSDLKKERP Trigger: AGGTCTTTCCTTCTTTAAGTCTGATACCATTAACACAGATGCTCACACTGGGGCCAGATCTGCATCTGTTAAATCCTGCTGCAGGAATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000339336.9 ENST00000504451.1 |
||
| CDS CCA 72 bp | TGGGAGTTGGGAGGCGGCCTGCTGGGGTTCCCTGGGTaGCAGGATTTACACCTGCTCCTCCTGCTGGAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: WELGGGLLGFPG*QDLHLLLLLEG Trigger: GCCTTCCAGCAGGAGGAGCAGGTGTAAATCCTGCCACCCAGGGAACCCCAGCAGGCCGCCTCCCAACTCCCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000339336.9 ENST00000504451.1 |
||
| CDS CCA 72 bp | TGCTCCTCCTGCTGGAAGGCTTCCATCCTGGACATCTaGATTAGCCCCTGCCTGACTGGTGGGCAGGATGCC | + |
|
Preference number: 6 (lower is better) Translates to: CSSCWKASILDI*ISPCLTGGQDA Trigger: GGCATCCTGCCCACCAGTCAGGCAGGGGCTAATCCAGATGTCCAGGATGGAAGCCTTCCAGCAGGAGGAGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000339336.9 ENST00000504451.1 |
||
| CDS GCA 72 bp | TGGAAGGCTTCCATCCTGGACATCTGGATTAGCCCCTaGCTGACTGGTGGGCAGGATGCCTCCCGGGAACAA | + |
|
Preference number: 6 (lower is better) Translates to: WKASILDIWISP*LTGGQDASREQ Trigger: TTGTTCCCGGGAGGCATCCTGCCCACCAGTCAGGCAGGGGCTAATCCAGATGTCCAGGATGGAAGCCTTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000339336.9 ENST00000504451.1 |
||
| CDS GCA 72 bp | GGCTTCCTCGATGGCATGTGTGCTCCTTTGGATGCCTaGAGGGGTGGTCACTGCAAAGTCGTCATCTGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: GFLDGMCAPLDA*RGGHCKVVICA Trigger: GGCACAGATGACGACTTTGCAGTGACCACCCCTGCAGGCATCCAAAGGAGCACACATGCCATCGAGGAAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000339336.9 ENST00000504451.1 |
||
| CDS CCA 72 bp | TCCCTGGGTGGCAGGATTTACACCTGCTCCTCCTGCTaGAAGGCTTCCATCCTGGACATCTGGATTAGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: SLGGRIYTCSSC*KASILDIWISP Trigger: GGGGCTAATCCAGATGTCCAGGATGGAAGCCTTCCAGCAGGAGGAGCAGGTGTAAATCCTGCCACCCAGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000339336.9 ENST00000504451.1 |
||
| CDS CCA 72 bp | CGATGGCATGTGTGCTCCTTTGGATGCCTGCAGGGGTaGTCACTGCAAAGTCGTCATCTGTGCCACTGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: RWHVCSFGCLQG*SLQSRHLCHWE Trigger: CTCCCAGTGGCACAGATGACGACTTTGCAGTGACCACCCCTGCAGGCATCCAAAGGAGCACACATGCCATCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000339336.9 ENST00000504451.1 |
||
| CDS GCA 72 bp | TGGTGGCTTCCTCGATGGCATGTGTGCTCCTTTGGATaGCTGCAGGGGTGGTCACTGCAAAGTCGTCATCTG | + |
|
Preference number: 6 (lower is better) Translates to: WWLPRWHVCSFG*LQGWSLQSRHL Trigger: CAGATGACGACTTTGCAGTGACCACCCCTGCAGGCATCCAAAGGAGCACACATGCCATCGAGGAAGCCACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000339336.9 ENST00000504451.1 |
||
| CDS CCA 72 bp | TCTGTGGTGGCTTCCTCGATGGCATGTGTGCTCCTTTaGATGCCTGCAGGGGTGGTCACTGCAAAGTCGTCA | + |
|
Preference number: 6 (lower is better) Translates to: SVVASSMACVLL*MPAGVVTAKSS Trigger: TGACGACTTTGCAGTGACCACCCCTGCAGGCATCCAAAGGAGCACACATGCCATCGAGGAAGCCACCACAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000339336.9 ENST00000504451.1 |
||
| CDS CAA 72 bp | TTCTGTGGTGGCTTCCTCGATGGCATGTGTGCTCCTTaGGATGCCTGCAGGGGTGGTCACTGCAAAGTCGTC | + |
|
Preference number: 6 (lower is better) Translates to: FCGGFLDGMCAP*DACRGGHCKVV Trigger: GACGACTTTGCAGTGACCACCCCTGCAGGCATCCAAAGGAGCACACATGCCATCGAGGAAGCCACCACAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000339336.9 ENST00000504451.1 |
||
| CDS GCA 72 bp | TTGCTGATTCTGTGGTGGCTTCCTCGATGGCATGTGTaGTCCTTTGGATGCCTGCAGGGGTGGTCACTGCAA | + |
|
Preference number: 6 (lower is better) Translates to: LLILWWLPRWHV*SFGCLQGWSLQ Trigger: TTGCAGTGACCACCCCTGCAGGCATCCAAAGGAGCACACATGCCATCGAGGAAGCCACCACAGAATCAGCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000339336.9 ENST00000504451.1 |
||
| CDS CCA 72 bp | CAGTTGCTGTTGTACATTCAACCCTCCCAGGGTCAATaGGTGGGTCTGGGTACCAGGTGTCATTCCTGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: QLLLYIQPSQGQ*VGLGTRCHSCS Trigger: GCTGCAGGAATGACACCTGGTACCCAGACCCACCCATTGACCCTGGGAGGGTTGAATGTACAACAGCAACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000339336.9 ENST00000504451.1 |
||
| CDS CCA 72 bp | GAATTCCATTTGCTGATTCTGTGGTGGCTTCCTCGATaGCATGTGTGCTCCTTTGGATGCCTGCAGGGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: EFHLLILWWLPR*HVCSFGCLQGW Trigger: CCACCCCTGCAGGCATCCAAAGGAGCACACATGCCATCGAGGAAGCCACCACAGAATCAGCAAATGGAATTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000339336.9 ENST00000504451.1 |
||
| CDS CCA 72 bp | TGTACATTCAACCCTCCCAGGGTCAATGGGTGGGTCTaGGTACCAGGTGTCATTCCTGCAGCAGGATTTAAC | + |
|
Preference number: 6 (lower is better) Translates to: CTFNPPRVNGWV*VPGVIPAAGFN Trigger: GTTAAATCCTGCTGCAGGAATGACACCTGGTACCCAGACCCACCCATTGACCCTGGGAGGGTTGAATGTACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000339336.9 ENST00000504451.1 |
||
| CDS CCA 72 bp | AAACAGCTTACTGAATTCCATTTGCTGATTCTGTGGTaGCTTCCTCGATGGCATGTGTGCTCCTTTGGATGC | + |
|
Preference number: 6 (lower is better) Translates to: KQLTEFHLLILW*LPRWHVCSFGC Trigger: GCATCCAAAGGAGCACACATGCCATCGAGGAAGCCACCACAGAATCAGCAAATGGAATTCAGTAAGCTGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000339336.9 ENST00000504451.1 |
||