RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AMPH (Homo sapiens)

Ensembl gene IDs: ENSG00000078053

Ensembl transcript IDs: ENST00000325590.9, ENST00000356264.7, ENST00000441628.5, ENST00000450124.1, ENST00000460887.1, ENST00000462072.1, ENST00000467580.5, ENST00000471913.5, ENST00000475581.5

Found 364 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CGAAGGAATGACCTTCTCCTGAGGCACTGTTGCTTCGAGCTCCTCTaGTTCAGGTTGGGCACTCTCTGCACCCTCAGTGGTTTCAGTTCC +
Preference number: 1 (lower is better)
Translates to: RRNDLLLRHCCFELL*FRLGTLCTLSGFSS
Trigger: GGAACTGAAACCACTGAGGGTGCAGAGAGTGCCCAACCTGAAGCAGAGGAGCTCGAAGCAACAGTGCCTCAGGAGAAGGTCATTCCTTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450124.1
3UTR CCA 90 bp CAGGTTGGGCACTCTCTGCACCCTCAGTGGTTTCAGTTCCAATTTTaGCCTCCTCTAAACTTACTCCTTCCCCGGCAGGGACAGTGGCCT +
Preference number: 1 (lower is better)
Translates to: QVGHSLHPQWFQFQF*PPLNLLLPRQGQWP
Trigger: AGGCCACTGTCCCTGCCGGGGAAGGAGTAAGTTTAGAGGAGGCCAAAATTGGAACTGAAACCACTGAGGGTGCAGAGAGTGCCCAACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450124.1
3UTR GCA 90 bp GGGAATAAGATAATCTTGTACTACAGGATAATTCATCACATCTTCTaGAGGGCAGCCACTCAATACGATACACCTGATGCAGAGAAATTA +
Preference number: 1 (lower is better)
Translates to: GNKIILYYRIIHHIF*RAATQYDTPDAEKL
Trigger: TAATTTCTCTGCATCAGGTGTATCGTATTGAGTGGCTGCCCTGCAGAAGATGTGATGAATTATCCTGTAGTACAAGATTATCTTATTCCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
3UTR-3UTR TCA 90 bp GCTTCGAGCTCCTCTGCTTCAGGTTGGGCACTCTCTGCACCCTCAGTGGTTTCAGGCCCCCTCAGCTGCTaGCACCAAGGTTCCAACAGC +
Preference number: 2 (lower is better)
Translates to: ASSSSASGWALSAPSVVSGPLSC*HQGSNS
Trigger: GCTGTTGGAACCTTGGTGTCAGCAGCTGAGGGGGCC...TGAAACCACTGAGGGTGCAGAGAGTGCCCAACCTGAAGCAGAGGAGCTCGAAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450124.1
3UTR-3UTR GCA 90 bp TTACTCCTTCCCCGGCAGGGACAGTGGCCTTCTCCGCCTCTGCTTCCTCTCCTGACTGGGGCGTTTTCTTaGTCCTGGGAAGATCGTGTA +
Preference number: 2 (lower is better)
Translates to: LLLPRQGQWPSPPLLPLLTGAFS*SWEDRV
Trigger: TACACGATCTTCCCAGGAGCAAGAAAACGCCCCAGT...CAGGAGAGGAAGCAGAGGCGGAGAAGGCCACTGTCCCTGCCGGGGAAGGAGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000450124.1
3UTR CAA 90 bp TCAGGTTGGGCACTCTCTGCACCCTCAGTGGTTTCAGTTCCAATTTaGGCCTCCTCTAAACTTACTCCTTCCCCGGCAGGGACAGTGGCC +
Preference number: 2 (lower is better)
Translates to: SGWALSAPSVVSVPI*ASSKLTPSPAGTVA
Trigger: GGCCACTGTCCCTGCCGGGGAAGGAGTAAGTTTAGAGGAGGCCAAAATTGGAACTGAAACCACTGAGGGTGCAGAGAGTGCCCAACCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450124.1
3UTR CAA 90 bp GACCTTCTCCTGAGGCACTGTTGCTTCGAGCTCCTCTGCTTCAGGTaGGGCACTCTCTGCACCCTCAGTGGTTTCAGTTCCAATTTTGGC +
Preference number: 2 (lower is better)
Translates to: DLLLRHCCFELLCFR*GTLCTLSGFSSNFG
Trigger: GCCAAAATTGGAACTGAAACCACTGAGGGTGCAGAGAGTGCCCAACCTGAAGCAGAGGAGCTCGAAGCAACAGTGCCTCAGGAGAAGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450124.1
3UTR-3UTR CCA 90 bp CTGCTTAGCTGCCCATCCCAACTAGCCTACCTCCAGCCACAGCGGCTGGACAGCTTCCCAAGGTTTGTCTaGCATCAGTCTGTAAATCAT +
Preference number: 2 (lower is better)
Translates to: LLSCPSQLAYLQPQRLDSFPRFV*HQSVNH
Trigger: ATGATTTACAGACTGATGCCAGACAAACCTTGGGAA...GCTGTCCAGCCGCTGTGGCTGGAGGTAGGCTAGTTGGGATGGGCAGCTAAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
3UTR-3UTR TCA 90 bp CTGCTTAGCTGCCCATCCCAACTAGCCTACCTCCAGCCACAGCGGCTGGACAGCTGTATCAATGACAATTaGGAGGCAAAGAGCTACAAT +
Preference number: 2 (lower is better)
Translates to: LLSCPSQLAYLQPQRLDSCINDN*EAKSYN
Trigger: ATTGTAGCTCTTTGCCTCTCAATTGTCATTGATACA...GCTGTCCAGCCGCTGTGGCTGGAGGTAGGCTAGTTGGGATGGGCAGCTAAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
3UTR-3UTR GCA 90 bp CCCATCCCAACTAGCCTACCTCCAGCCACAGCGGCTGGACAGCTAGATAAATCATCATGGGAACTAGCTTaGGTGACTGTGTGTCCATAT +
Preference number: 2 (lower is better)
Translates to: PIPTSLPPATAAGQLDKSSWELA*VTVCPY
Trigger: ATATGGACACACAGTCACGCAAGCTAGTTCCCATGA...TGATTTATCTAGCTGTCCAGCCGCTGTGGCTGGAGGTAGGCTAGTTGGGATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
3UTR CAA 90 bp GAGCGAGAGCACGTGCTCACACCTGGGCAGGGGAATAAGATAATCTaGTACTACAGGATAATTCATCACATCTTCTGCAGGGCAGCCACT +
Preference number: 2 (lower is better)
Translates to: EREHVLTPGQGNKII*YYRIIHHIFCRAAT
Trigger: AGTGGCTGCCCTGCAGAAGATGTGATGAATTATCCTGTAGTACAAGATTATCTTATTCCCCTGCCCAGGTGTGAGCACGTGCTCTCGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
3UTR-3UTR CCA 90 bp GGGCACTCTCTGCACCCTCAGTGGTTTCAGTTCCAATTTTGGCCTCCTCTAAACGCGTTTTCTTGCTCCTaGGAAGATCGTGTACAATCA +
Preference number: 2 (lower is better)
Translates to: GHSLHPQWFQFQFWPPLNAFSCS*EDRVQS
Trigger: TGATTGTACACGATCTTCCCAGGAGCAAGAAAACGC...GTTTAGAGGAGGCCAAAATTGGAACTGAAACCACTGAGGGTGCAGAGAGTGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450124.1
3UTR CAA 90 bp GATGCAGAGAAATTAAAGTCTGATCTGGAGAAAGCTACTTTAGAATaGGTGGGAGGGGATCAAGTACAAGAGTCTCCACAGCTTGGACAA +
Preference number: 2 (lower is better)
Translates to: DAEKLKSDLEKATLE*VGGDQVQESPQLGQ
Trigger: TTGTCCAAGCTGTGGAGACTCTTGTACTTGATCCCCTCCCACCAATTCTAAAGTAGCTTTCTCCAGATCAGACTTTAATTTCTCTGCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
3UTR-3UTR TCA 90 bp GATAATCTTGTACTACAGGATAATTCATCACATCTTCTGCAGGGCAGCCACTCAGCACACATGCTCCATTaGTACATCTTCCCAAGGTTT +
Preference number: 2 (lower is better)
Translates to: DNLVLQDNSSHLLQGSHSAHMLH*YIFPRF
Trigger: AAACCTTGGGAAGATGTATCAATGGAGCATGTGTGC...TGAGTGGCTGCCCTGCAGAAGATGTGATGAATTATCCTGTAGTACAAGATTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
3UTR-3UTR TCA 90 bp CTTGGACAAAGCACAAACAAACCTGTTATTGACAACATGGGAATGAGTGAGGATGCACACATGCTCCATTaGTACATCTTCCCAAGGTTT +
Preference number: 2 (lower is better)
Translates to: LGQSTNKPVIDNMGMSEDAHMLH*YIFPRF
Trigger: AAACCTTGGGAAGATGTATCAATGGAGCATGTGTGC...ATCCTCACTCATTCCCATGTTGTCAATAACAGGTTTGTTTGTGCTTTGTCCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
3UTR-3UTR TCA 90 bp TATGTAGCCTTCTGCATACACATAGATCCAGGAGTCATGGGAACTAGCTTGCGTGTTGGAAAAGAACATTaGGAACTTTTGCAGCAGTTT +
Preference number: 2 (lower is better)
Translates to: YVAFCIHIDPGVMGTSLRVGKEH*ELLQQF
Trigger: AAACTGCTGCAAAAGTTCTCAATGTTCTTTTCCAAC...ACGCAAGCTAGTTCCCATGACTCCTGGATCTATGTGTATGCAGAAGGCTACATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
3UTR-3UTR CCA 90 bp TCTGATCTGGAGAAAGCTACTTTAGAATTGGTGGGAGGGGATCAAGTACAAGAGTTCCCAAGGTTTGTCTaGCATCAGTCTGTAAATCAT +
Preference number: 2 (lower is better)
Translates to: SDLEKATLELVGGDQVQEFPRFV*HQSVNH
Trigger: ATGATTTACAGACTGATGCCAGACAAACCTTGGGAA...CTCTTGTACTTGATCCCCTCCCACCAATTCTAAAGTAGCTTTCTCCAGATCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
3UTR-3UTR CAA 90 bp TCCTCTAAACTTACTCCTTCCCCGGCAGGGACAGTGGCCTTCTCCGCCTCTGCTCACTGGGGCGTTTTCTaGCTCCTGGGAAGATCGTGT +
Preference number: 3 (lower is better)
Translates to: SSKLTPSPAGTVAFSASAHWGVF*LLGRSC
Trigger: ACACGATCTTCCCAGGAGCAAGAAAACGCCCCAGTG...AGCAGAGGCGGAGAAGGCCACTGTCCCTGCCGGGGAAGGAGTAAGTTTAGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000450124.1
3UTR-3UTR CAA 90 bp CTGCTTAGCTGCCCATCCCAACTAGCCTACCTCCAGCCACAGCGGCTGGACAGCAAAGCTACTTTAGAATaGGTGGGAGGGGATCAAGTA +
Preference number: 3 (lower is better)
Translates to: LLSCPSQLAYLQPQRLDSKATLE*VGGDQV
Trigger: TACTTGATCCCCTCCCACCAATTCTAAAGTAGCTTT...GCTGTCCAGCCGCTGTGGCTGGAGGTAGGCTAGTTGGGATGGGCAGCTAAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
3UTR-3UTR CAA 90 bp CCCATCCCAACTAGCCTACCTCCAGCCACAGCGGCTGGACAGCTAGATAAATCAGTCATGGGAACTAGCTaGCGTGACTGTGTGTCCATA +
Preference number: 3 (lower is better)
Translates to: PIPTSLPPATAAGQLDKSVMGTS*RDCVSI
Trigger: TATGGACACACAGTCACGCAAGCTAGTTCCCATGAC...TGATTTATCTAGCTGTCCAGCCGCTGTGGCTGGAGGTAGGCTAGTTGGGATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
3UTR CCA 72 bp CACTCTCTGCACCCTCAGTGGTTTCAGTTCCAATTTTaGCCTCCTCTAAACTTACTCCTTCCCCGGCAGGGA +
Preference number: 3 (lower is better)
Translates to: HSLHPQWFQFQF*PPLNLLLPRQG
Trigger: TCCCTGCCGGGGAAGGAGTAAGTTTAGAGGAGGCCAAAATTGGAACTGAAACCACTGAGGGTGCAGAGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450124.1
3UTR CCA 72 bp GTCAATGAGCCAAACACTGGGGCGTTTTCTTGCTCCTaGGAAGATCGTGTACAATCACGACTCACTGGGAGA +
Preference number: 3 (lower is better)
Translates to: VNEPNTGAFSCS*EDRVQSRLTGR
Trigger: TCTCCCAGTGAGTCGTGATTGTACACGATCTTCCCAGGAGCAAGAAAACGCCCCAGTGTTTGGCTCATTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450124.1
3UTR TCA 72 bp ATCAGCTCCAGGTATGATCTCGCTCAGAATAGTCAATaGGCCAAACACTGGGGCGTTTTCTTGCTCCTGGGA +
Preference number: 3 (lower is better)
Translates to: ISSRYDLAQNSQ*AKHWGVFLLLG
Trigger: TCCCAGGAGCAAGAAAACGCCCCAGTGTTTGGCTCATTGACTATTCTGAGCGAGATCATACCTGGAGCTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450124.1
3UTR-3UTR CAA 90 bp GTTTTAAACATAGTAAACCTGAAAGGGAGCGAGAGCACGTGCTCACACCTGGGCTGCACACATGCTCCATaGATACATCTTCCCAAGGTT +
Preference number: 3 (lower is better)
Translates to: VLNIVNLKGSESTCSHLGCTHAP*IHLPKV
Trigger: AACCTTGGGAAGATGTATCAATGGAGCATGTGTGCA...GCCCAGGTGTGAGCACGTGCTCTCGCTCCCTTTCAGGTTTACTATGTTTAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
3UTR-3UTR CAA 90 bp TGCATACACATAGATCCAGGAGTCATGGGAACTAGCTTGCGTGACTGTGTGTCCTGCACACATGCTCCATaGATACATCTTCCCAAGGTT +
Preference number: 3 (lower is better)
Translates to: CIHIDPGVMGTSLRDCVSCTHAP*IHLPKV
Trigger: AACCTTGGGAAGATGTATCAATGGAGCATGTGTGCA...GGACACACAGTCACGCAAGCTAGTTCCCATGACTCCTGGATCTATGTGTATGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
3UTR GCA 72 bp AGAATAGTCAATGAGCCAAACACTGGGGCGTTTTCTTaGTCCTGGGAAGATCGTGTACAATCACGACTCACT +
Preference number: 3 (lower is better)
Translates to: RIVNEPNTGAFS*SWEDRVQSRLT
Trigger: AGTGAGTCGTGATTGTACACGATCTTCCCAGGAGCAAGAAAACGCCCCAGTGTTTGGCTCATTGACTATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450124.1
3UTR-3UTR CAA 90 bp TGCATACACATAGATCCAGGAGTCATGGGAACTAGCTTGCGTGACTGTGTGTCCTGTTGGAAAAGAACATaGAGAACTTTTGCAGCAGTT +
Preference number: 3 (lower is better)
Translates to: CIHIDPGVMGTSLRDCVSCWKRT*RTFAAV
Trigger: AACTGCTGCAAAAGTTCTCAATGTTCTTTTCCAACA...GGACACACAGTCACGCAAGCTAGTTCCCATGACTCCTGGATCTATGTGTATGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
3UTR TCA 72 bp TGCCTCAGTGTAGTCGTGCTATCTGTCATCTCATCCTaGAAACTGCACAGTACAAACACAGATACTGTTGAC +
Preference number: 3 (lower is better)
Translates to: CLSVVVLSVISS*KLHSTNTDTVD
Trigger: GTCAACAGTATCTGTGTTTGTACTGTGCAGTTTTCAGGATGAGATGACAGATAGCACGACTACACTGAGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
3UTR-3UTR CAA 90 bp GATAATCTTGTACTACAGGATAATTCATCACATCTTCTGCAGGGCAGCCACTCAAAGAGTCTCCACAGCTaGGACAAAGCACAAACAAAC +
Preference number: 3 (lower is better)
Translates to: DNLVLQDNSSHLLQGSHSKSLHS*DKAQTN
Trigger: GTTTGTTTGTGCTTTGTCCAAGCTGTGGAGACTCTT...TGAGTGGCTGCCCTGCAGAAGATGTGATGAATTATCCTGTAGTACAAGATTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
3UTR GCA 72 bp ATAATCTTGTACTACAGGATAATTCATCACATCTTCTaGAGGGCAGCCACTCAATACGATACACCTGATGCA +
Preference number: 3 (lower is better)
Translates to: IILYYRIIHHIF*RAATQYDTPDA
Trigger: TGCATCAGGTGTATCGTATTGAGTGGCTGCCCTGCAGAAGATGTGATGAATTATCCTGTAGTACAAGATTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR GCA 90 bp TTACTCCTTCCCCGGCAGGGACAGTGGCCTTCTCCGCCTCTGCTTCCTCTCCTGGGCCTTCTCCGCCTCTaGTTCCTCTCCTGGGGCCCC +
Preference number: 4 (lower is better)
Translates to: LLLPRQGQWPSPPLLPLLGLLRL*FLSWGP
Trigger: GGGGCCCCAGGAGAGGAAGCAGAGGCGGAGAAGGCC...CAGGAGAGGAAGCAGAGGCGGAGAAGGCCACTGTCCCTGCCGGGGAAGGAGTAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450124.1
CDS-3UTR CCA 90 bp CTGCTTAGCTGCCCATCCCAACTAGCCTACCTCCAGCCACAGCGGCTGGACAGCGAGCCGCGTCCTCGGTaGTCTCCTTGGGCTCTGCAC +
Preference number: 4 (lower is better)
Translates to: LLSCPSQLAYLQPQRLDSEPRPR*SPWALH
Trigger: GTGCAGAGCCCAAGGAGACCACCGAGGACGCGGCTC...GCTGTCCAGCCGCTGTGGCTGGAGGTAGGCTAGTTGGGATGGGCAGCTAAGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR TCA 90 bp CTGCTTAGCTGCCCATCCCAACTAGCCTACCTCCAGCCACAGCGGCTGGACAGCTTTCCTGCGCGCGGTTaGGTCGCTTCTGGACGTTCT +
Preference number: 4 (lower is better)
Translates to: LLSCPSQLAYLQPQRLDSFPARG*VASGRS
Trigger: AGAACGTCCAGAAGCGACTCAACCGCGCGCAGGAAA...GCTGTCCAGCCGCTGTGGCTGGAGGTAGGCTAGTTGGGATGGGCAGCTAAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR TCA 90 bp CTGTTGCTTCGAGCTCCTCTGCTTCAGGTTGGGCACTCTCTGCACCCTCAGTGGGGCCCCCTCAGCTGCTaGCACCAAGGTTCCAACAGC +
Preference number: 4 (lower is better)
Translates to: LLLRAPLLQVGHSLHPQWGPLSC*HQGSNS
Trigger: GCTGTTGGAACCTTGGTGTCAGCAGCTGAGGGGGCC...CCACTGAGGGTGCAGAGAGTGCCCAACCTGAAGCAGAGGAGCTCGAAGCAACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450124.1
CDS-3UTR TCA 90 bp CTGCTTAGCTGCCCATCCCAACTAGCCTACCTCCAGCCACAGCGGCTGGACAGCCCAGGAGGCAATTCCTaGGAGGCCTCCCTTGCAGAT +
Preference number: 4 (lower is better)
Translates to: LLSCPSQLAYLQPQRLDSPGGNS*EASLAD
Trigger: ATCTGCAAGGGAGGCCTCTCAGGAATTGCCTCCTGG...GCTGTCCAGCCGCTGTGGCTGGAGGTAGGCTAGTTGGGATGGGCAGCTAAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR GCA 90 bp CTGCTTAGCTGCCCATCCCAACTAGCCTACCTCCAGCCACAGCGGCTGGACAGCTGGAGGACCTTTTCCTaGGCGCGGTTGAGTCGCTTC +
Preference number: 4 (lower is better)
Translates to: LLSCPSQLAYLQPQRLDSWRTFS*ARLSRF
Trigger: GAAGCGACTCAACCGCGCGCAGGAAAAGGTCCTCCA...GCTGTCCAGCCGCTGTGGCTGGAGGTAGGCTAGTTGGGATGGGCAGCTAAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR GCA 90 bp CTGCTTAGCTGCCCATCCCAACTAGCCTACCTCCAGCCACAGCGGCTGGACAGCTCCTGGATAGGCTTCTaGTCCGTAGCCAGCTCCGGT +
Preference number: 4 (lower is better)
Translates to: LLSCPSQLAYLQPQRLDSSWIGF*SVASSG
Trigger: ACCGGAGCTGGCTACGGAGCAGAAGCCTATCCAGGA...GCTGTCCAGCCGCTGTGGCTGGAGGTAGGCTAGTTGGGATGGGCAGCTAAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR CCA 90 bp CCTCTCCTGGGGCCCCCTCAGCTGCTGACACCAAGGTTCCAACAGCTGCATCAGCTCCGGCGCAGGCTTTaGGGGCAGTTGTTCATTTCC +
Preference number: 4 (lower is better)
Translates to: PLLGPPQLLTPRFQQLHQLRRRL*GQLFIS
Trigger: GGAAATGAACAACTGCCCCCAAAGCCTGCGCCGGAG...CTGATGCAGCTGTTGGAACCTTGGTGTCAGCAGCTGAGGGGGCCCCAGGAGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000450124.1
CDS-3UTR GCA 90 bp CTGCTTAGCTGCCCATCCCAACTAGCCTACCTCCAGCCACAGCGGCTGGACAGCCTCCTGAGGCACTGTTaGTTCGAGCTCCTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: LLSCPSQLAYLQPQRLDSLLRHC*FELLCF
Trigger: GAAGCAGAGGAGCTCGAAGCAACAGTGCCTCAGGAG...GCTGTCCAGCCGCTGTGGCTGGAGGTAGGCTAGTTGGGATGGGCAGCTAAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR GCA 90 bp TTACTCCTTCCCCGGCAGGGACAGTGGCCTTCTCCGCCTCTGCTTCCTCTCCTGCTCCTGAGGCACTGTTaGTTCGAGCTCCTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: LLLPRQGQWPSPPLLPLLLLRHC*FELLCF
Trigger: GAAGCAGAGGAGCTCGAAGCAACAGTGCCTCAGGAG...CAGGAGAGGAAGCAGAGGCGGAGAAGGCCACTGTCCCTGCCGGGGAAGGAGTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450124.1
CDS-3UTR CCA 90 bp CTGCTTAGCTGCCCATCCCAACTAGCCTACCTCCAGCCACAGCGGCTGGACAGCTCCTCTGCTTCAGGTTaGGCACTCTCTGCACCCTCA +
Preference number: 4 (lower is better)
Translates to: LLSCPSQLAYLQPQRLDSSSASG*ALSAPS
Trigger: TGAGGGTGCAGAGAGTGCCCAACCTGAAGCAGAGGA...GCTGTCCAGCCGCTGTGGCTGGAGGTAGGCTAGTTGGGATGGGCAGCTAAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR TCA 90 bp GACCTTCTCCTGAGGCACTGTTGCTTCGAGCTCCTCTGCTTCAGGTTGGGCACTCCACCAGAAGCCTTTTaGCACGCCTCCACACCTGCC +
Preference number: 4 (lower is better)
Translates to: DLLLRHCCFELLCFRLGTPPEAF*HASTPA
Trigger: GGCAGGTGTGGAGGCGTGTCAAAAGGCTTCTGGTGG...AGTGCCCAACCTGAAGCAGAGGAGCTCGAAGCAACAGTGCCTCAGGAGAAGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450124.1
CDS-3UTR CCA 90 bp GCTTCGAGCTCCTCTGCTTCAGGTTGGGCACTCTCTGCACCCTCAGTGGTTTCACCACACAAGCAGCAATaGCAACTCCAGCCTCCGGCG +
Preference number: 4 (lower is better)
Translates to: ASSSSASGWALSAPSVVSPHKQQ*QLQPPA
Trigger: CGCCGGAGGCTGGAGTTGCCATTGCTGCTTGTGTGG...TGAAACCACTGAGGGTGCAGAGAGTGCCCAACCTGAAGCAGAGGAGCTCGAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450124.1
CDS-3UTR GCA 90 bp TGCATACACATAGATCCAGGAGTCATGGGAACTAGCTTGCGTGACTGTGTGTCCGGCCTTCTCCGCCTCTaGTTCCTCTCCTGGGGCCCC +
Preference number: 4 (lower is better)
Translates to: CIHIDPGVMGTSLRDCVSGLLRL*FLSWGP
Trigger: GGGGCCCCAGGAGAGGAAGCAGAGGCGGAGAAGGCC...GGACACACAGTCACGCAAGCTAGTTCCCATGACTCCTGGATCTATGTGTATGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR CCA 90 bp GAAAGCTACTTTAGAATTGGTGGGAGGGGATCAAGTACAAGAGTCTCCACAGCTCCGGTGTCTCGCTGGTaGGGCCCGGAGGAGCCGCGT +
Preference number: 4 (lower is better)
Translates to: ESYFRIGGRGSSTRVSTAPVSRW*GPEEPR
Trigger: ACGCGGCTCCTCCGGGCCCCACCAGCGAGACACCGG...AGCTGTGGAGACTCTTGTACTTGATCCCCTCCCACCAATTCTAAAGTAGCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR CCA 90 bp GAAAGCTACTTTAGAATTGGTGGGAGGGGATCAAGTACAAGAGTCTCCACAGCTGCTCCGGTGTCTCGCTaGTGGGGCCCGGAGGAGCCG +
Preference number: 4 (lower is better)
Translates to: ESYFRIGGRGSSTRVSTAAPVSR*WGPEEP
Trigger: CGGCTCCTCCGGGCCCCACCAGCGAGACACCGGAGC...AGCTGTGGAGACTCTTGTACTTGATCCCCTCCCACCAATTCTAAAGTAGCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR GCA 90 bp TCCTCTAAACTTACTCCTTCCCCGGCAGGGACAGTGGCCTTCTCCGCCTCTGCTAGGTTGGGCACTCTCTaGACCCTCAGTGGTTTCAGT +
Preference number: 4 (lower is better)
Translates to: SSKLTPSPAGTVAFSASARLGTL*TLSGFS
Trigger: ACTGAAACCACTGAGGGTGCAGAGAGTGCCCAACCT...AGCAGAGGCGGAGAAGGCCACTGTCCCTGCCGGGGAAGGAGTAAGTTTAGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450124.1
CDS-3UTR GCA 90 bp GTTTTAAACATAGTAAACCTGAAAGGGAGCGAGAGCACGTGCTCACACCTGGGCGGGAGCGAGAGCACGTaGTCACACCTGGGCAGGGGA +
Preference number: 4 (lower is better)
Translates to: VLNIVNLKGSESTCSHLGGSEST*SHLGRG
Trigger: TCCCCTGCCCAGGTGTGAGCACGTGCTCTCGCTCCC...GCCCAGGTGTGAGCACGTGCTCTCGCTCCCTTTCAGGTTTACTATGTTTAAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR CCA 90 bp CTGCTTAGCTGCCCATCCCAACTAGCCTACCTCCAGCCACAGCGGCTGGACAGCAGAGGCCTTTGTAGGTaGCAAGGTCTCTGTACTGAA +
Preference number: 4 (lower is better)
Translates to: LLSCPSQLAYLQPQRLDSRGLCR*QGLCTE
Trigger: TTCAGTACAGAGACCTTGCCACCTACAAAGGCCTCT...GCTGTCCAGCCGCTGTGGCTGGAGGTAGGCTAGTTGGGATGGGCAGCTAAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR CCA 90 bp GACCTTCTCCTGAGGCACTGTTGCTTCGAGCTCCTCTGCTTCAGGTTGGGCACTGGCCAGCTGTGTCCATaGCTGGCATGTCTGAGTCAA +
Preference number: 4 (lower is better)
Translates to: DLLLRHCCFELLCFRLGTGQLCP*LACLSQ
Trigger: TTGACTCAGACATGCCAGCCATGGACACAGCTGGCC...AGTGCCCAACCTGAAGCAGAGGAGCTCGAAGCAACAGTGCCTCAGGAGAAGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450124.1
3UTR CAA 72 bp CTGAGGCACTGTTGCTTCGAGCTCCTCTGCTTCAGGTaGGGCACTCTCTGCACCCTCAGTGGTTTCAGTTCC +
Preference number: 4 (lower is better)
Translates to: LRHCCFELLCFR*GTLCTLSGFSS
Trigger: GGAACTGAAACCACTGAGGGTGCAGAGAGTGCCCAACCTGAAGCAGAGGAGCTCGAAGCAACAGTGCCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450124.1
CDS-3UTR TCA 90 bp CTGCTTAGCTGCCCATCCCAACTAGCCTACCTCCAGCCACAGCGGCTGGACAGCGCACACATGCTCCATTaGTACATCTTCCCAAGGTTT +
Preference number: 4 (lower is better)
Translates to: LLSCPSQLAYLQPQRLDSAHMLH*YIFPRF
Trigger: AAACCTTGGGAAGATGTATCAATGGAGCATGTGTGC...GCTGTCCAGCCGCTGTGGCTGGAGGTAGGCTAGTTGGGATGGGCAGCTAAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR TCA 90 bp CCTCTAAACTTACTCCTTCCCCGGCAGGGACAGTGGCCTTCTCCGCCTCTGCTTGCTCAGAATAGTCAATaGGCCAAACACTGGGGCGTT +
Preference number: 4 (lower is better)
Translates to: PLNLLLPRQGQWPSPPLLAQNSQ*AKHWGV
Trigger: AACGCCCCAGTGTTTGGCTCATTGACTATTCTGAGC...AAGCAGAGGCGGAGAAGGCCACTGTCCCTGCCGGGGAAGGAGTAAGTTTAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450124.1
CDS-3UTR GCA 90 bp GAAAGCTACTTTAGAATTGGTGGGAGGGGATCAAGTACAAGAGTCTCCACAGCTGATGTCGGCCATGGCTaGGGGTCCGGGGAGCTGCGA +
Preference number: 4 (lower is better)
Translates to: ESYFRIGGRGSSTRVSTADVGHG*GSGELR
Trigger: TCGCAGCTCCCCGGACCCGCAGCCATGGCCGACATC...AGCTGTGGAGACTCTTGTACTTGATCCCCTCCCACCAATTCTAAAGTAGCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325590.9
CDS-3UTR GCA 90 bp CCCATCCCAACTAGCCTACCTCCAGCCACAGCGGCTGGACAGCTAGATAAATCATGTATGATTTGGACTTaGTGTCGGGCTCGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: PIPTSLPPATAAGQLDKSCMIWT*CRAREG
Trigger: CCCCTCCCGAGCCCGACAGCAAGTCCAAATCATACA...TGATTTATCTAGCTGTCCAGCCGCTGTGGCTGGAGGTAGGCTAGTTGGGATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR GCA 90 bp ACTGTTGCTTCGAGCTCCTCTGCTTCAGGTTGGGCACTCTCTGCACCCTCAGTGCAAGGTTCCAACAGCTaGATCAGCATCAGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: TVASSSSASGWALSAPSVQGSNS*ISISSR
Trigger: CCTGGAGCTGATGCTGATGCAGCTGTTGGAACCTTG...CACTGAGGGTGCAGAGAGTGCCCAACCTGAAGCAGAGGAGCTCGAAGCAACAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450124.1
CDS-3UTR CCA 90 bp CCTCTCCTGGGGCCCCCTCAGCTGCTGACACCAAGGTTCCAACAGCTGCATCAGACAATCACGACTCACTaGGAGACATCAGTTCACTGT +
Preference number: 4 (lower is better)
Translates to: PLLGPPQLLTPRFQQLHQTITTH*ETSVHC
Trigger: ACAGTGAACTGATGTCTCCCAGTGAGTCGTGATTGT...CTGATGCAGCTGTTGGAACCTTGGTGTCAGCAGCTGAGGGGGCCCCAGGAGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450124.1
CDS-3UTR TCA 90 bp GGGCGTTTTCTTGCTCCTGGGAAGATCGTGTACAATCACGACTCACTGGGAGACGGAATGACCTTCTCCTaGGGCACTGTTGCTTCGAGC +
Preference number: 4 (lower is better)
Translates to: GRFLAPGKIVYNHDSLGDGMTFS*GTVASS
Trigger: GCTCGAAGCAACAGTGCCTCAGGAGAAGGTCATTCC...GTCTCCCAGTGAGTCGTGATTGTACACGATCTTCCCAGGAGCAAGAAAACGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450124.1
CDS-3UTR TCA 90 bp CCCATCCCAACTAGCCTACCTCCAGCCACAGCGGCTGGACAGCTAGATAAATCAGTACTGAAGCCAGTCTaGTTCCTTCACTCCCACCAG +
Preference number: 4 (lower is better)
Translates to: PIPTSLPPATAAGQLDKSVLKPV*FLHSHQ
Trigger: CTGGTGGGAGTGAAGGAATCAGACTGGCTTCAGTAC...TGATTTATCTAGCTGTCCAGCCGCTGTGGCTGGAGGTAGGCTAGTTGGGATGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR GCA 90 bp GATAATCTTGTACTACAGGATAATTCATCACATCTTCTGCAGGGCAGCCACTCAGCGGGTCCGGGGAGCTaGGAAGAGCAGAGCGCGCAG +
Preference number: 4 (lower is better)
Translates to: DNLVLQDNSSHLLQGSHSAGPGS*EEQSAQ
Trigger: CTGCGCGCTCTGCTCTTCGCAGCTCCCCGGACCCGC...TGAGTGGCTGCCCTGCAGAAGATGTGATGAATTATCCTGTAGTACAAGATTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325590.9
3UTR CAA 72 bp GCACTCTCTGCACCCTCAGTGGTTTCAGTTCCAATTTaGGCCTCCTCTAAACTTACTCCTTCCCCGGCAGGG +
Preference number: 4 (lower is better)
Translates to: ALSAPSVVSVPI*ASSKLTPSPAG
Trigger: CCCTGCCGGGGAAGGAGTAAGTTTAGAGGAGGCCAAAATTGGAACTGAAACCACTGAGGGTGCAGAGAGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450124.1
CDS-3UTR TCA 90 bp TATGTAGCCTTCTGCATACACATAGATCCAGGAGTCATGGGAACTAGCTTGCGTCGAAGATGCCCGTCTTaGTGTCGGCCATGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: YVAFCIHIDPGVMGTSLRRRCPS*CRPWLR
Trigger: CCGCAGCCATGGCCGACATCAAGACGGGCATCTTCG...ACGCAAGCTAGTTCCCATGACTCCTGGATCTATGTGTATGCAGAAGGCTACATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR TCA 90 bp CCCATCCCAACTAGCCTACCTCCAGCCACAGCGGCTGGACAGCTAGATAAATCACCATCCACGAGTTTTTaGTGGAAGTCTTCCCACAGC +
Preference number: 4 (lower is better)
Translates to: PIPTSLPPATAAGQLDKSPSTSF*WKSSHS
Trigger: GCTGTGGGAAGACTTCCATCAAAAACTCGTGGATGG...TGATTTATCTAGCTGTCCAGCCGCTGTGGCTGGAGGTAGGCTAGTTGGGATGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR TCA 90 bp TATGTAGCCTTCTGCATACACATAGATCCAGGAGTCATGGGAACTAGCTTGCGTGCGCTCCTTGGATGGTaGAGGCCTTGTCGGCGTGCT +
Preference number: 4 (lower is better)
Translates to: YVAFCIHIDPGVMGTSLRALLGW*RPCRRA
Trigger: AGCACGCCGACAAGGCCTTCACCATCCAAGGAGCGC...ACGCAAGCTAGTTCCCATGACTCCTGGATCTATGTGTATGCAGAAGGCTACATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR TCA 90 bp GGGGATCAAGTACAAGAGTCTCCACAGCTTGGACAAAGCACAAACAAACCTGTTGCGCTCCTTGGATGGTaGAGGCCTTGTCGGCGTGCT +
Preference number: 4 (lower is better)
Translates to: GDQVQESPQLGQSTNKPVALLGW*RPCRRA
Trigger: AGCACGCCGACAAGGCCTTCACCATCCAAGGAGCGC...AACAGGTTTGTTTGTGCTTTGTCCAAGCTGTGGAGACTCTTGTACTTGATCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR GCA 90 bp CCCATCCCAACTAGCCTACCTCCAGCCACAGCGGCTGGACAGCTAGATAAATCACTGATGATGTTCTCCTaGTGCAGTTCCTTTGTCGGG +
Preference number: 4 (lower is better)
Translates to: PIPTSLPPATAAGQLDKSLMMFS*CSSFVG
Trigger: CCCGACAAAGGAACTGCAGCAGGAGAACATCATCAG...TGATTTATCTAGCTGTCCAGCCGCTGTGGCTGGAGGTAGGCTAGTTGGGATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR GCA 90 bp TTGTACTACAGGATAATTCATCACATCTTCTGCAGGGCAGCCACTCAATACGATGGCCTTCTCCGCCTCTaGTTCCTCTCCTGGGGCCCC +
Preference number: 4 (lower is better)
Translates to: LYYRIIHHIFCRAATQYDGLLRL*FLSWGP
Trigger: GGGGCCCCAGGAGAGGAAGCAGAGGCGGAGAAGGCC...ATCGTATTGAGTGGCTGCCCTGCAGAAGATGTGATGAATTATCCTGTAGTACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR CCA 90 bp CTGCTTCAGGTTGGGCACTCTCTGCACCCTCAGTGGTTTCAGTTCCAATTTTGGTCCTCTGCTTCAGGTTaGGCACTCTCTGCACCCTCA +
Preference number: 4 (lower is better)
Translates to: LLQVGHSLHPQWFQFQFWSSASG*ALSAPS
Trigger: TGAGGGTGCAGAGAGTGCCCAACCTGAAGCAGAGGA...CCAAAATTGGAACTGAAACCACTGAGGGTGCAGAGAGTGCCCAACCTGAAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450124.1
CDS-3UTR CCA 90 bp GAGTCTCCACAGCTTGGACAAAGCACAAACAAACCTGTTATTGACAACATGGGAGAGCCGCGTCCTCGGTaGTCTCCTTGGGCTCTGCAC +
Preference number: 4 (lower is better)
Translates to: ESPQLGQSTNKPVIDNMGEPRPR*SPWALH
Trigger: GTGCAGAGCCCAAGGAGACCACCGAGGACGCGGCTC...TCCCATGTTGTCAATAACAGGTTTGTTTGTGCTTTGTCCAAGCTGTGGAGACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR CCA 90 bp GACAGAATAAGAGCAATGCATGTATCAATGACAATTGAGAGGCAAAGAGCTACAGCTCCGGTGTCTCGCTaGTGGGGCCCGGAGGAGCCG +
Preference number: 4 (lower is better)
Translates to: DRIRAMHVSMTIERQRATAPVSR*WGPEEP
Trigger: CGGCTCCTCCGGGCCCCACCAGCGAGACACCGGAGC...TGTAGCTCTTTGCCTCTCAATTGTCATTGATACATGCATTGCTCTTATTCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR CCA 90 bp GTTTTAAACATAGTAAACCTGAAAGGGAGCGAGAGCACGTGCTCACACCTGGGCCTTGCAGATGCTAGCTaGTCAGCAGCCCCCATGGCT +
Preference number: 4 (lower is better)
Translates to: VLNIVNLKGSESTCSHLGLADAS*SAAPMA
Trigger: AGCCATGGGGGCTGCTGACCAGCTAGCATCTGCAAG...GCCCAGGTGTGAGCACGTGCTCTCGCTCCCTTTCAGGTTTACTATGTTTAAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR CCA 90 bp GTTTTAAACATAGTAAACCTGAAAGGGAGCGAGAGCACGTGCTCACACCTGGGCAGGCTCCTCTGCTTTTaGCTCTGTGGGTGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: VLNIVNLKGSESTCSHLGRLLCF*LCGWSL
Trigger: CAGGCTCCACCCACAGAGCCAAAAGCAGAGGAGCCT...GCCCAGGTGTGAGCACGTGCTCTCGCTCCCTTTCAGGTTTACTATGTTTAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356264.7
CDS-3UTR TCA 90 bp GAGTCTCCACAGCTTGGACAAAGCACAAACAAACCTGTTATTGACAACATGGGACGAAGATGCCCGTCTTaGTGTCGGCCATGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: ESPQLGQSTNKPVIDNMGRRCPS*CRPWLR
Trigger: CCGCAGCCATGGCCGACATCAAGACGGGCATCTTCG...TCCCATGTTGTCAATAACAGGTTTGTTTGTGCTTTGTCCAAGCTGTGGAGACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR TCA 90 bp GAGTCTCCACAGCTTGGACAAAGCACAAACAAACCTGTTATTGACAACATGGGAGGCCCCCTCAGCTGCTaGCACCAAGGTTCCAACAGC +
Preference number: 4 (lower is better)
Translates to: ESPQLGQSTNKPVIDNMGGPLSC*HQGSNS
Trigger: GCTGTTGGAACCTTGGTGTCAGCAGCTGAGGGGGCC...TCCCATGTTGTCAATAACAGGTTTGTTTGTGCTTTGTCCAAGCTGTGGAGACTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR TCA 90 bp TGCATACACATAGATCCAGGAGTCATGGGAACTAGCTTGCGTGACTGTGTGTCCGGAATGACCTTCTCCTaGGGCACTGTTGCTTCGAGC +
Preference number: 4 (lower is better)
Translates to: CIHIDPGVMGTSLRDCVSGMTFS*GTVASS
Trigger: GCTCGAAGCAACAGTGCCTCAGGAGAAGGTCATTCC...GGACACACAGTCACGCAAGCTAGTTCCCATGACTCCTGGATCTATGTGTATGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR TCA 90 bp GTTTTAAACATAGTAAACCTGAAAGGGAGCGAGAGCACGTGCTCACACCTGGGCCATCAGCTCCAGGTATaGTCACTGCCTCCTCCACTG +
Preference number: 4 (lower is better)
Translates to: VLNIVNLKGSESTCSHLGHQLQV*SLPPPL
Trigger: CAGTGGAGGAGGCAGTGATCATACCTGGAGCTGATG...GCCCAGGTGTGAGCACGTGCTCTCGCTCCCTTTCAGGTTTACTATGTTTAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356264.7
CDS-3UTR TCA 90 bp GGGCACTCTCTGCACCCTCAGTGGTTTCAGTTCCAATTTTGGCCTCCTCTAAACCATGGCTGGCATGTCTaGGTCAAGTGGGTCATACAG +
Preference number: 4 (lower is better)
Translates to: GHSLHPQWFQFQFWPPLNHGWHV*VKWVIQ
Trigger: CTGTATGACCCACTTGACTCAGACATGCCAGCCATG...GTTTAGAGGAGGCCAAAATTGGAACTGAAACCACTGAGGGTGCAGAGAGTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450124.1
CDS-3UTR GCA 90 bp ATTCATCACATCTTCTGCAGGGCAGCCACTCAATACGATACACCTGATGCAGAGTGGAGGACCTTTTCCTaGGCGCGGTTGAGTCGCTTC +
Preference number: 4 (lower is better)
Translates to: IHHIFCRAATQYDTPDAEWRTFS*ARLSRF
Trigger: GAAGCGACTCAACCGCGCGCAGGAAAAGGTCCTCCA...CTCTGCATCAGGTGTATCGTATTGAGTGGCTGCCCTGCAGAAGATGTGATGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR GCA 90 bp TGCATACACATAGATCCAGGAGTCATGGGAACTAGCTTGCGTGACTGTGTGTCCTGCTTCGAGCTCCTCTaGTTCAGGTTGGGCACTCTC +
Preference number: 4 (lower is better)
Translates to: CIHIDPGVMGTSLRDCVSCFELL*FRLGTL
Trigger: GAGAGTGCCCAACCTGAAGCAGAGGAGCTCGAAGCA...GGACACACAGTCACGCAAGCTAGTTCCCATGACTCCTGGATCTATGTGTATGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR GCA 90 bp TCAGCTCCAGGTATGATCTCGCTCAGAATAGTCAATGAGCCAAACACTGGGGCGACACGCCTCCACACCTaGCCACAGAGAATCTTCCAT +
Preference number: 4 (lower is better)
Translates to: SAPGMISLRIVNEPNTGATRLHT*PQRIFH
Trigger: ATGGAAGATTCTCTGTGGGCAGGTGTGGAGGCGTGT...CGCCCCAGTGTTTGGCTCATTGACTATTCTGAGCGAGATCATACCTGGAGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450124.1
CDS-3UTR CCA 90 bp CTGCTTAGCTGCCCATCCCAACTAGCCTACCTCCAGCCACAGCGGCTGGACAGCTGTCACACTGATTTCTaGAACAAAGTTGTCCTCAAA +
Preference number: 4 (lower is better)
Translates to: LLSCPSQLAYLQPQRLDSCHTDF*NKVVLK
Trigger: TTTGAGGACAACTTTGTTCCAGAAATCAGTGTGACA...GCTGTCCAGCCGCTGTGGCTGGAGGTAGGCTAGTTGGGATGGGCAGCTAAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR CCA 90 bp TGGCCTCCTCTAAACTTACTCCTTCCCCGGCAGGGACAGTGGCCTTCTCCGCCTTTGCAGATCATACTCTaGTCTGTCTGCATTGTGAAT +
Preference number: 4 (lower is better)
Translates to: WPPLNLLLPRQGQWPSPPLQIIL*SVCIVN
Trigger: ATTCACAATGCAGACAGACCAGAGTATGATCTGCAA...AGGCGGAGAAGGCCACTGTCCCTGCCGGGGAAGGAGTAAGTTTAGAGGAGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450124.1
CDS-3UTR CCA 90 bp TGCATACACATAGATCCAGGAGTCATGGGAACTAGCTTGCGTGACTGTGTGTCCTCCTCTGCTTCAGGTTaGGCACTCTCTGCACCCTCA +
Preference number: 4 (lower is better)
Translates to: CIHIDPGVMGTSLRDCVSSSASG*ALSAPS
Trigger: TGAGGGTGCAGAGAGTGCCCAACCTGAAGCAGAGGA...GGACACACAGTCACGCAAGCTAGTTCCCATGACTCCTGGATCTATGTGTATGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR CCA 90 bp TTGTACTACAGGATAATTCATCACATCTTCTGCAGGGCAGCCACTCAATACGATAGCAGCCCCCATGGCTaGTGCAGAAGGCGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: LYYRIIHHIFCRAATQYDSSPHG*CRRRGL
Trigger: CAGCCCACGCCTTCTGCACCAGCCATGGGGGCTGCT...ATCGTATTGAGTGGCTGCCCTGCAGAAGATGTGATGAATTATCCTGTAGTACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR CCA 90 bp ATTCATCACATCTTCTGCAGGGCAGCCACTCAATACGATACACCTGATGCAGAGCTTGCAGATGCTAGCTaGTCAGCAGCCCCCATGGCT +
Preference number: 4 (lower is better)
Translates to: IHHIFCRAATQYDTPDAELADAS*SAAPMA
Trigger: AGCCATGGGGGCTGCTGACCAGCTAGCATCTGCAAG...CTCTGCATCAGGTGTATCGTATTGAGTGGCTGCCCTGCAGAAGATGTGATGAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR TCA 90 bp GATAATCTTGTACTACAGGATAATTCATCACATCTTCTGCAGGGCAGCCACTCAGGCCCCCTCAGCTGCTaGCACCAAGGTTCCAACAGC +
Preference number: 4 (lower is better)
Translates to: DNLVLQDNSSHLLQGSHSGPLSC*HQGSNS
Trigger: GCTGTTGGAACCTTGGTGTCAGCAGCTGAGGGGGCC...TGAGTGGCTGCCCTGCAGAAGATGTGATGAATTATCCTGTAGTACAAGATTATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR TCA 90 bp CACATAGATCCAGGAGTCATGGGAACTAGCTTGCGTGACTGTGTGTCCATATATCCAGGAGGCAATTCCTaGGAGGCCTCCCTTGCAGAT +
Preference number: 4 (lower is better)
Translates to: HIDPGVMGTSLRDCVSIYPGGNS*EASLAD
Trigger: ATCTGCAAGGGAGGCCTCTCAGGAATTGCCTCCTGG...ATATATGGACACACAGTCACGCAAGCTAGTTCCCATGACTCCTGGATCTATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR TCA 90 bp TGCATACACATAGATCCAGGAGTCATGGGAACTAGCTTGCGTGACTGTGTGTCCGTACTGAAGCCAGTCTaGTTCCTTCACTCCCACCAG +
Preference number: 4 (lower is better)
Translates to: CIHIDPGVMGTSLRDCVSVLKPV*FLHSHQ
Trigger: CTGGTGGGAGTGAAGGAATCAGACTGGCTTCAGTAC...GGACACACAGTCACGCAAGCTAGTTCCCATGACTCCTGGATCTATGTGTATGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR TCA 90 bp TCAGGTTGGGCACTCTCTGCACCCTCAGTGGTTTCAGTTCCAATTTTGGCCTCCCTTCATGACTTTCTTTaGACAGGCCAGCTGTGTCCA +
Preference number: 4 (lower is better)
Translates to: SGWALSAPSVVSVPILASLHDFL*TGQLCP
Trigger: TGGACACAGCTGGCCTGTTCAAAGAAAGTCATGAAG...GGAGGCCAAAATTGGAACTGAAACCACTGAGGGTGCAGAGAGTGCCCAACCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450124.1
CDS-3UTR GCA 90 bp GTTTTAAACATAGTAAACCTGAAAGGGAGCGAGAGCACGTGCTCACACCTGGGCAGGTTGGGCACTCTCTaGACCCTCAGTGGTTTCAGT +
Preference number: 4 (lower is better)
Translates to: VLNIVNLKGSESTCSHLGRLGTL*TLSGFS
Trigger: ACTGAAACCACTGAGGGTGCAGAGAGTGCCCAACCT...GCCCAGGTGTGAGCACGTGCTCTCGCTCCCTTTCAGGTTTACTATGTTTAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR GCA 90 bp GGGGATCAAGTACAAGAGTCTCCACAGCTTGGACAAAGCACAAACAAACCTGTTTCCTGGATAGGCTTCTaGTCCGTAGCCAGCTCCGGT +
Preference number: 4 (lower is better)
Translates to: GDQVQESPQLGQSTNKPVSWIGF*SVASSG
Trigger: ACCGGAGCTGGCTACGGAGCAGAAGCCTATCCAGGA...AACAGGTTTGTTTGTGCTTTGTCCAAGCTGTGGAGACTCTTGTACTTGATCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR GCA 90 bp GTTTTAAACATAGTAAACCTGAAAGGGAGCGAGAGCACGTGCTCACACCTGGGCGGCAGAAGAGAAGACTaGTTAGCTGCCCATCCCAAC +
Preference number: 4 (lower is better)
Translates to: VLNIVNLKGSESTCSHLGGRRED*LAAHPN
Trigger: GTTGGGATGGGCAGCTAAGCAGTCTTCTCTTCTGCC...GCCCAGGTGTGAGCACGTGCTCTCGCTCCCTTTCAGGTTTACTATGTTTAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR GCA 90 bp TGCTTCAGGTTGGGCACTCTCTGCACCCTCAGTGGTTTCAGTTCCAATTTTGGCAGTGGGTCATACAGCTaGTCCATCTCCACACAAGCA +
Preference number: 4 (lower is better)
Translates to: CFRLGTLCTLSGFSSNFGSGSYS*SISTQA
Trigger: TGCTTGTGTGGAGATGGAGCAGCTGTATGACCCACT...GCCAAAATTGGAACTGAAACCACTGAGGGTGCAGAGAGTGCCCAACCTGAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450124.1
CDS-3UTR CCA 90 bp CACATAGATCCAGGAGTCATGGGAACTAGCTTGCGTGACTGTGTGTCCATATATTCACTGGGCGCTCCTTaGATGGTGAAGGCCTTGTCG +
Preference number: 4 (lower is better)
Translates to: HIDPGVMGTSLRDCVSIYSLGAP*MVKALS
Trigger: CGACAAGGCCTTCACCATCCAAGGAGCGCCCAGTGA...ATATATGGACACACAGTCACGCAAGCTAGTTCCCATGACTCCTGGATCTATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR TCA 90 bp GAGTCTCCACAGCTTGGACAAAGCACAAACAAACCTGTTATTGACAACATGGGACATGCAGCGACTCTGTaGGCTTCATGGAGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: ESPQLGQSTNKPVIDNMGHAATL*ASWRPP
Trigger: AGGAGGCCTCCATGAAGCTCACAGAGTCGCTGCATG...TCCCATGTTGTCAATAACAGGTTTGTTTGTGCTTTGTCCAAGCTGTGGAGACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR TCA 90 bp TATGTAGCCTTCTGCATACACATAGATCCAGGAGTCATGGGAACTAGCTTGCGTTGTCTGAGACATGGGTaGGTGGGTCACTCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: YVAFCIHIDPGVMGTSLRCLRHG*VGHSSR
Trigger: TCTGCTGGAGTGACCCACTCACCCATGTCTCAGACA...ACGCAAGCTAGTTCCCATGACTCCTGGATCTATGTGTATGCAGAAGGCTACATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR TCA 90 bp TGCATACACATAGATCCAGGAGTCATGGGAACTAGCTTGCGTGACTGTGTGTCCAATCTAAGCGTCGGGTaGAGTTCTCTGGAAAGAGGC +
Preference number: 4 (lower is better)
Translates to: CIHIDPGVMGTSLRDCVSNLSVG*SSLERG
Trigger: GCCTCTTTCCAGAGAACTTCACCCGACGCTTAGATT...GGACACACAGTCACGCAAGCTAGTTCCCATGACTCCTGGATCTATGTGTATGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR GCA 90 bp CACATAGATCCAGGAGTCATGGGAACTAGCTTGCGTGACTGTGTGTCCATATATTGTATGATTTGGACTTaGTGTCGGGCTCGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: HIDPGVMGTSLRDCVSIYCMIWT*CRAREG
Trigger: CCCCTCCCGAGCCCGACAGCAAGTCCAAATCATACA...ATATATGGACACACAGTCACGCAAGCTAGTTCCCATGACTCCTGGATCTATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR GCA 90 bp TCTGATCTGGAGAAAGCTACTTTAGAATTGGTGGGAGGGGATCAAGTACAAGAGCACTCCAGCAGAACCTaGAGGTGTCACCTCGGGCTT +
Preference number: 4 (lower is better)
Translates to: SDLEKATLELVGGDQVQEHSSRT*RCHLGL
Trigger: AAGCCCGAGGTGACACCTGCAGGTTCTGCTGGAGTG...CTCTTGTACTTGATCCCCTCCCACCAATTCTAAAGTAGCTTTCTCCAGATCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR GCA 90 bp ATTCATCACATCTTCTGCAGGGCAGCCACTCAATACGATACACCTGATGCAGAGCAAGGTTCCAACAGCTaGATCAGCATCAGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: IHHIFCRAATQYDTPDAEQGSNS*ISISSR
Trigger: CCTGGAGCTGATGCTGATGCAGCTGTTGGAACCTTG...CTCTGCATCAGGTGTATCGTATTGAGTGGCTGCCCTGCAGAAGATGTGATGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR GCA 90 bp CTCTCTGCACCCTCAGTGGTTTCAGTTCCAATTTTGGCCTCCTCTAAACTTACTTGCTTCGAGCTCCTCTaGTTCAGGTTGGGCACTCTC +
Preference number: 4 (lower is better)
Translates to: LSAPSVVSVPILASSKLTCFELL*FRLGTL
Trigger: GAGAGTGCCCAACCTGAAGCAGAGGAGCTCGAAGCA...AGTAAGTTTAGAGGAGGCCAAAATTGGAACTGAAACCACTGAGGGTGCAGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450124.1
CDS-3UTR GCA 90 bp GTTTTAAACATAGTAAACCTGAAAGGGAGCGAGAGCACGTGCTCACACCTGGGCAGAAGACTGCTTAGCTaGCCATCCCAACTAGCCTAC +
Preference number: 4 (lower is better)
Translates to: VLNIVNLKGSESTCSHLGRRLLS*PSQLAY
Trigger: GTAGGCTAGTTGGGATGGGCAGCTAAGCAGTCTTCT...GCCCAGGTGTGAGCACGTGCTCTCGCTCCCTTTCAGGTTTACTATGTTTAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR CCA 90 bp ATTCATCACATCTTCTGCAGGGCAGCCACTCAATACGATACACCTGATGCAGAGCGGTTGAGTCGCTTCTaGACGTTCTTGGCGAAGATG +
Preference number: 4 (lower is better)
Translates to: IHHIFCRAATQYDTPDAERLSRF*TFLAKM
Trigger: CATCTTCGCCAAGAACGTCCAGAAGCGACTCAACCG...CTCTGCATCAGGTGTATCGTATTGAGTGGCTGCCCTGCAGAAGATGTGATGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR CCA 90 bp TCTGATCTGGAGAAAGCTACTTTAGAATTGGTGGGAGGGGATCAAGTACAAGAGTCACTGGGCGCTCCTTaGATGGTGAAGGCCTTGTCG +
Preference number: 4 (lower is better)
Translates to: SDLEKATLELVGGDQVQESLGAP*MVKALS
Trigger: CGACAAGGCCTTCACCATCCAAGGAGCGCCCAGTGA...CTCTTGTACTTGATCCCCTCCCACCAATTCTAAAGTAGCTTTCTCCAGATCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR CCA 90 bp GACAGAATAAGAGCAATGCATGTATCAATGACAATTGAGAGGCAAAGAGCTACAAGCAGCCCCCATGGCTaGTGCAGAAGGCGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: DRIRAMHVSMTIERQRATSSPHG*CRRRGL
Trigger: CAGCCCACGCCTTCTGCACCAGCCATGGGGGCTGCT...TGTAGCTCTTTGCCTCTCAATTGTCATTGATACATGCATTGCTCTTATTCTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR TCA 90 bp TCTGATCTGGAGAAAGCTACTTTAGAATTGGTGGGAGGGGATCAAGTACAAGAGTGTCTGAGACATGGGTaGGTGGGTCACTCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: SDLEKATLELVGGDQVQECLRHG*VGHSSR
Trigger: TCTGCTGGAGTGACCCACTCACCCATGTCTCAGACA...CTCTTGTACTTGATCCCCTCCCACCAATTCTAAAGTAGCTTTCTCCAGATCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR TCA 90 bp TGCATACACATAGATCCAGGAGTCATGGGAACTAGCTTGCGTGACTGTGTGTCCTGTGAATCCATTAAATaGACCACCAGAAGCCGGCTG +
Preference number: 4 (lower is better)
Translates to: CIHIDPGVMGTSLRDCVSCESIK*TTRSRL
Trigger: CAGCCGGCTTCTGGTGGTTCATTTAATGGATTCACA...GGACACACAGTCACGCAAGCTAGTTCCCATGACTCCTGGATCTATGTGTATGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR TCA 90 bp CTGCTTCAGGTTGGGCACTCTCTGCACCCTCAGTGGTTTCAGTTCCAATTTTGGGGTCTGTCTGCATTGTaGATAATGAAGTATCCTGGG +
Preference number: 4 (lower is better)
Translates to: LLQVGHSLHPQWFQFQFWGLSAL*IMKYPG
Trigger: CCCAGGATACTTCATTATTCACAATGCAGACAGACC...CCAAAATTGGAACTGAAACCACTGAGGGTGCAGAGAGTGCCCAACCTGAAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450124.1
CDS-3UTR GCA 90 bp TTGTACTACAGGATAATTCATCACATCTTCTGCAGGGCAGCCACTCAATACGATCACTCCAGCAGAACCTaGAGGTGTCACCTCGGGCTT +
Preference number: 4 (lower is better)
Translates to: LYYRIIHHIFCRAATQYDHSSRT*RCHLGL
Trigger: AAGCCCGAGGTGACACCTGCAGGTTCTGCTGGAGTG...ATCGTATTGAGTGGCTGCCCTGCAGAAGATGTGATGAATTATCCTGTAGTACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR GCA 90 bp GTTTTAAACATAGTAAACCTGAAAGGGAGCGAGAGCACGTGCTCACACCTGGGCTCTTGCAGTACTTGTTaGCCTAATCTAAGCGTCGGG +
Preference number: 4 (lower is better)
Translates to: VLNIVNLKGSESTCSHLGSCSTC*PNLSVG
Trigger: CCCGACGCTTAGATTAGGGCAACAAGTACTGCAAGA...GCCCAGGTGTGAGCACGTGCTCTCGCTCCCTTTCAGGTTTACTATGTTTAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR GCA 90 bp CCCATCCCAACTAGCCTACCTCCAGCCACAGCGGCTGGACAGCTAGATAAATCAGTATATGTAGCCTTCTaGATACACATAGATCCAGGA +
Preference number: 4 (lower is better)
Translates to: PIPTSLPPATAAGQLDKSVYVAF*IHIDPG
Trigger: TCCTGGATCTATGTGTATGCAGAAGGCTACATATAC...TGATTTATCTAGCTGTCCAGCCGCTGTGGCTGGAGGTAGGCTAGTTGGGATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR GCA 90 bp ATTCATCACATCTTCTGCAGGGCAGCCACTCAATACGATACACCTGATGCAGAGAGAAGACTGCTTAGCTaGCCATCCCAACTAGCCTAC +
Preference number: 4 (lower is better)
Translates to: IHHIFCRAATQYDTPDAERRLLS*PSQLAY
Trigger: GTAGGCTAGTTGGGATGGGCAGCTAAGCAGTCTTCT...CTCTGCATCAGGTGTATCGTATTGAGTGGCTGCCCTGCAGAAGATGTGATGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR GCA 90 bp CACATAGATCCAGGAGTCATGGGAACTAGCTTGCGTGACTGTGTGTCCATATATGGCAGAAGAGAAGACTaGTTAGCTGCCCATCCCAAC +
Preference number: 4 (lower is better)
Translates to: HIDPGVMGTSLRDCVSIYGRRED*LAAHPN
Trigger: GTTGGGATGGGCAGCTAAGCAGTCTTCTCTTCTGCC...ATATATGGACACACAGTCACGCAAGCTAGTTCCCATGACTCCTGGATCTATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR CCA 90 bp ATTCATCACATCTTCTGCAGGGCAGCCACTCAATACGATACACCTGATGCAGAGTCTCATCCTTCCTCTTaGAGCTCTGCAGAGCTTCCA +
Preference number: 4 (lower is better)
Translates to: IHHIFCRAATQYDTPDAESHPSS*SSAELP
Trigger: TGGAAGCTCTGCAGAGCTCCAAGAGGAAGGATGAGA...CTCTGCATCAGGTGTATCGTATTGAGTGGCTGCCCTGCAGAAGATGTGATGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR CCA 90 bp TGCATACACATAGATCCAGGAGTCATGGGAACTAGCTTGCGTGACTGTGTGTCCTCAGGGACTTCATTCTaGGAAGGTGTTGTCACACTG +
Preference number: 4 (lower is better)
Translates to: CIHIDPGVMGTSLRDCVSSGTSF*EGVVTL
Trigger: CAGTGTGACAACACCTTCCCAGAATGAAGTCCCTGA...GGACACACAGTCACGCAAGCTAGTTCCCATGACTCCTGGATCTATGTGTATGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR CCA 90 bp CCCATCCCAACTAGCCTACCTCCAGCCACAGCGGCTGGACAGCTAGATAAATCATTGCAGATCATACTCTaGTCTGTCTGCATTGTGAAT +
Preference number: 4 (lower is better)
Translates to: PIPTSLPPATAAGQLDKSLQIIL*SVCIVN
Trigger: ATTCACAATGCAGACAGACCAGAGTATGATCTGCAA...TGATTTATCTAGCTGTCCAGCCGCTGTGGCTGGAGGTAGGCTAGTTGGGATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR CCA 90 bp GTTTTAAACATAGTAAACCTGAAAGGGAGCGAGAGCACGTGCTCACACCTGGGCTCGGGTGAAGTTCTCTaGAAAGAGGCCTTTGTAGGT +
Preference number: 4 (lower is better)
Translates to: VLNIVNLKGSESTCSHLGSGEVL*KEAFVG
Trigger: ACCTACAAAGGCCTCTTTCCAGAGAACTTCACCCGA...GCCCAGGTGTGAGCACGTGCTCTCGCTCCCTTTCAGGTTTACTATGTTTAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR CCA 90 bp CTGCTTCAGGTTGGGCACTCTCTGCACCCTCAGTGGTTTCAGTTCCAATTTTGGGCGTTTTCTTGCTCCTaGGAAGATCGTGTACAATCA +
Preference number: 4 (lower is better)
Translates to: LLQVGHSLHPQWFQFQFWAFSCS*EDRVQS
Trigger: TGATTGTACACGATCTTCCCAGGAGCAAGAAAACGC...CCAAAATTGGAACTGAAACCACTGAGGGTGCAGAGAGTGCCCAACCTGAAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450124.1
CDS-3UTR TCA 90 bp CTTGGACAAAGCACAAACAAACCTGTTATTGACAACATGGGAATGAGTGAGGATCATGCAGCGACTCTGTaGGCTTCATGGAGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: LGQSTNKPVIDNMGMSEDHAATL*ASWRPP
Trigger: AGGAGGCCTCCATGAAGCTCACAGAGTCGCTGCATG...ATCCTCACTCATTCCCATGTTGTCAATAACAGGTTTGTTTGTGCTTTGTCCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR TCA 90 bp CACATAGATCCAGGAGTCATGGGAACTAGCTTGCGTGACTGTGTGTCCATATATGCAGGTGCTAATGTATaGTTTGGACTTGCTGTCGGG +
Preference number: 4 (lower is better)
Translates to: HIDPGVMGTSLRDCVSIYAGANV*FGLAVG
Trigger: CCCGACAGCAAGTCCAAATCATACATTAGCACCTGC...ATATATGGACACACAGTCACGCAAGCTAGTTCCCATGACTCCTGGATCTATGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR TCA 90 bp TATGTAGCCTTCTGCATACACATAGATCCAGGAGTCATGGGAACTAGCTTGCGTGTGTCACCTCGGGCTTaGAAGGATCAAAGTCCAGAT +
Preference number: 4 (lower is better)
Translates to: YVAFCIHIDPGVMGTSLRVSPRA*KDQSPD
Trigger: ATCTGGACTTTGATCCTTTCAAGCCCGAGGTGACAC...ACGCAAGCTAGTTCCCATGACTCCTGGATCTATGTGTATGCAGAAGGCTACATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR TCA 90 bp ATTCATCACATCTTCTGCAGGGCAGCCACTCAATACGATACACCTGATGCAGAGTGTGAATCCATTAAATaGACCACCAGAAGCCGGCTG +
Preference number: 4 (lower is better)
Translates to: IHHIFCRAATQYDTPDAECESIK*TTRSRL
Trigger: CAGCCGGCTTCTGGTGGTTCATTTAATGGATTCACA...CTCTGCATCAGGTGTATCGTATTGAGTGGCTGCCCTGCAGAAGATGTGATGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR TCA 90 bp TGCATACACATAGATCCAGGAGTCATGGGAACTAGCTTGCGTGACTGTGTGTCCGGTCTGTCTGCATTGTaGATAATGAAGTATCCTGGG +
Preference number: 4 (lower is better)
Translates to: CIHIDPGVMGTSLRDCVSGLSAL*IMKYPG
Trigger: CCCAGGATACTTCATTATTCACAATGCAGACAGACC...GGACACACAGTCACGCAAGCTAGTTCCCATGACTCCTGGATCTATGTGTATGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR TCA 90 bp TTGTACTACAGGATAATTCATCACATCTTCTGCAGGGCAGCCACTCAATACGATGGAATGACCTTCTCCTaGGGCACTGTTGCTTCGAGC +
Preference number: 4 (lower is better)
Translates to: LYYRIIHHIFCRAATQYDGMTFS*GTVASS
Trigger: GCTCGAAGCAACAGTGCCTCAGGAGAAGGTCATTCC...ATCGTATTGAGTGGCTGCCCTGCAGAAGATGTGATGAATTATCCTGTAGTACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR TCA 90 bp TATGTAGCCTTCTGCATACACATAGATCCAGGAGTCATGGGAACTAGCTTGCGTAATCTAAGCGTCGGGTaGAGTTCTCTGGAAAGAGGC +
Preference number: 4 (lower is better)
Translates to: YVAFCIHIDPGVMGTSLRNLSVG*SSLERG
Trigger: GCCTCTTTCCAGAGAACTTCACCCGACGCTTAGATT...ACGCAAGCTAGTTCCCATGACTCCTGGATCTATGTGTATGCAGAAGGCTACATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR TCA 90 bp GTTTTAAACATAGTAAACCTGAAAGGGAGCGAGAGCACGTGCTCACACCTGGGCGCACACATGCTCCATTaGTACATCTTCCCAAGGTTT +
Preference number: 4 (lower is better)
Translates to: VLNIVNLKGSESTCSHLGAHMLH*YIFPRF
Trigger: AAACCTTGGGAAGATGTATCAATGGAGCATGTGTGC...GCCCAGGTGTGAGCACGTGCTCTCGCTCCCTTTCAGGTTTACTATGTTTAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR TCA 90 bp GGGCGTTTTCTTGCTCCTGGGAAGATCGTGTACAATCACGACTCACTGGGAGACCTCTTCCTCTTCATCTaGCTTCTTCATATCTTCATG +
Preference number: 4 (lower is better)
Translates to: GRFLAPGKIVYNHDSLGDLFLFI*LLHIFM
Trigger: CATGAAGATATGAAGAAGTCAGATGAAGAGGAAGAG...GTCTCCCAGTGAGTCGTGATTGTACACGATCTTCCCAGGAGCAAGAAAACGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450124.1
CDS-3UTR TCA 90 bp GAGCCAAACACTGGGGCGTTTTCTTGCTCCTGGGAAGATCGTGTACAATCACGAGACATCAGTTCACTGTaGTTTCCAAGTTGCAGATCA +
Preference number: 4 (lower is better)
Translates to: EPNTGAFSCSWEDRVQSRDISSL*FPSCRS
Trigger: TGATCTGCAACTTGGAAATCACAGTGAACTGATGTC...TCGTGATTGTACACGATCTTCCCAGGAGCAAGAAAACGCCCCAGTGTTTGGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450124.1
CDS-3UTR GCA 90 bp CACATAGATCCAGGAGTCATGGGAACTAGCTTGCGTGACTGTGTGTCCATATATTTCATGGAGGCCTCCTaGATGCCTTTGATTGCTGCT +
Preference number: 4 (lower is better)
Translates to: HIDPGVMGTSLRDCVSIYFMEAS*MPLIAA
Trigger: AGCAGCAATCAAAGGCATGCAGGAGGCCTCCATGAA...ATATATGGACACACAGTCACGCAAGCTAGTTCCCATGACTCCTGGATCTATGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR GCA 90 bp GATAATCTTGTACTACAGGATAATTCATCACATCTTCTGCAGGGCAGCCACTCACCACTAGCTTCCTGCTaGGCTTGGCGATGCGATTCT +
Preference number: 4 (lower is better)
Translates to: DNLVLQDNSSHLLQGSHSPLASC*AWRCDS
Trigger: AGAATCGCATCGCCAAGCGCAGCAGGAAGCTAGTGG...TGAGTGGCTGCCCTGCAGAAGATGTGATGAATTATCCTGTAGTACAAGATTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR GCA 90 bp GATAATCTTGTACTACAGGATAATTCATCACATCTTCTGCAGGGCAGCCACTCAAGTCCACTAGCTTCCTaGTGCGCTTGGCGATGCGAT +
Preference number: 4 (lower is better)
Translates to: DNLVLQDNSSHLLQGSHSSPLAS*CAWRCD
Trigger: ATCGCATCGCCAAGCGCAGCAGGAAGCTAGTGGACT...TGAGTGGCTGCCCTGCAGAAGATGTGATGAATTATCCTGTAGTACAAGATTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR GCA 90 bp GCTTCGAGCTCCTCTGCTTCAGGTTGGGCACTCTCTGCACCCTCAGTGGTTTCAATACTCTGGTCTGTCTaGATTGTGAATAATGAAGTA +
Preference number: 4 (lower is better)
Translates to: ASSSSASGWALSAPSVVSILWSV*IVNNEV
Trigger: TACTTCATTATTCACAATGCAGACAGACCAGAGTAT...TGAAACCACTGAGGGTGCAGAGAGTGCCCAACCTGAAGCAGAGGAGCTCGAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450124.1
CDS-3UTR GCA 90 bp GATAATCTTGTACTACAGGATAATTCATCACATCTTCTGCAGGGCAGCCACTCATCCAGGTATGATCACTaGCTCCTCCACTGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: DNLVLQDNSSHLLQGSHSSRYDH*LLHWLL
Trigger: GAGGAGCCAGTGGAGGAGGCAGTGATCATACCTGGA...TGAGTGGCTGCCCTGCAGAAGATGTGATGAATTATCCTGTAGTACAAGATTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356264.7
CDS-3UTR GCA 90 bp CTCTCTGCACCCTCAGTGGTTTCAGTTCCAATTTTGGCCTCCTCTAAACTTACTACTGGGGCGTTTTCTTaGTCCTGGGAAGATCGTGTA +
Preference number: 4 (lower is better)
Translates to: LSAPSVVSVPILASSKLTTGAFS*SWEDRV
Trigger: TACACGATCTTCCCAGGAGCAAGAAAACGCCCCAGT...AGTAAGTTTAGAGGAGGCCAAAATTGGAACTGAAACCACTGAGGGTGCAGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000450124.1
CDS-3UTR CCA 90 bp GAAAGCTACTTTAGAATTGGTGGGAGGGGATCAAGTACAAGAGTCTCCACAGCTTCTCCTTCCTCTTCATaGTTGGAGGCAGGCTCTATG +
Preference number: 4 (lower is better)
Translates to: ESYFRIGGRGSSTRVSTASPSSS*LEAGSM
Trigger: CATAGAGCCTGCCTCCAACCATGAAGAGGAAGGAGA...AGCTGTGGAGACTCTTGTACTTGATCCCCTCCCACCAATTCTAAAGTAGCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR TCA 90 bp GACAGAATAAGAGCAATGCATGTATCAATGACAATTGAGAGGCAAAGAGCTACATTTCCTGCGCGCGGTTaGGTCGCTTCTGGACGTTCT +
Preference number: 4 (lower is better)
Translates to: DRIRAMHVSMTIERQRATFPARG*VASGRS
Trigger: AGAACGTCCAGAAGCGACTCAACCGCGCGCAGGAAA...TGTAGCTCTTTGCCTCTCAATTGTCATTGATACATGCATTGCTCTTATTCTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR TCA 90 bp TGCATACACATAGATCCAGGAGTCATGGGAACTAGCTTGCGTGACTGTGTGTCCTCTGTCATCTCATCCTaGAAACTGCACAGTACAAAC +
Preference number: 4 (lower is better)
Translates to: CIHIDPGVMGTSLRDCVSSVISS*KLHSTN
Trigger: GTTTGTACTGTGCAGTTTTCAGGATGAGATGACAGA...GGACACACAGTCACGCAAGCTAGTTCCCATGACTCCTGGATCTATGTGTATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR TCA 90 bp GGGCACTCTCTGCACCCTCAGTGGTTTCAGTTCCAATTTTGGCCTCCTCTAAACTGTGAATCCATTAAATaGACCACCAGAAGCCTTTTG +
Preference number: 4 (lower is better)
Translates to: GHSLHPQWFQFQFWPPLNCESIK*TTRSLL
Trigger: CAAAAGGCTTCTGGTGGTTCATTTAATGGATTCACA...GTTTAGAGGAGGCCAAAATTGGAACTGAAACCACTGAGGGTGCAGAGAGTGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450124.1
CDS-3UTR GCA 90 bp CTTGGACAAAGCACAAACAAACCTGTTATTGACAACATGGGAATGAGTGAGGATCCACTAGCTTCCTGCTaGGCTTGGCGATGCGATTCT +
Preference number: 4 (lower is better)
Translates to: LGQSTNKPVIDNMGMSEDPLASC*AWRCDS
Trigger: AGAATCGCATCGCCAAGCGCAGCAGGAAGCTAGTGG...ATCCTCACTCATTCCCATGTTGTCAATAACAGGTTTGTTTGTGCTTTGTCCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR GCA 90 bp GATAATCTTGTACTACAGGATAATTCATCACATCTTCTGCAGGGCAGCCACTCACAAGGTTCCAACAGCTaGATCAGCATCAGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: DNLVLQDNSSHLLQGSHSQGSNS*ISISSR
Trigger: CCTGGAGCTGATGCTGATGCAGCTGTTGGAACCTTG...TGAGTGGCTGCCCTGCAGAAGATGTGATGAATTATCCTGTAGTACAAGATTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR GCA 90 bp CTTGGACAAAGCACAAACAAACCTGTTATTGACAACATGGGAATGAGTGAGGATCTCCTGAGGCACTGTTaGTTCGAGCTCCTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: LGQSTNKPVIDNMGMSEDLLRHC*FELLCF
Trigger: GAAGCAGAGGAGCTCGAAGCAACAGTGCCTCAGGAG...ATCCTCACTCATTCCCATGTTGTCAATAACAGGTTTGTTTGTGCTTTGTCCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR GCA 90 bp ATTCATCACATCTTCTGCAGGGCAGCCACTCAATACGATACACCTGATGCAGAGGGTCTCCTTGGGCTCTaGACCTATAGTTATTTCGTT +
Preference number: 4 (lower is better)
Translates to: IHHIFCRAATQYDTPDAEGLLGL*TYSYFV
Trigger: AACGAAATAACTATAGGTGCAGAGCCCAAGGAGACC...CTCTGCATCAGGTGTATCGTATTGAGTGGCTGCCCTGCAGAAGATGTGATGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR GCA 90 bp CACATAGATCCAGGAGTCATGGGAACTAGCTTGCGTGACTGTGTGTCCATATATTCTTGCAGTACTTGTTaGCCTAATCTAAGCGTCGGG +
Preference number: 4 (lower is better)
Translates to: HIDPGVMGTSLRDCVSIYSCSTC*PNLSVG
Trigger: CCCGACGCTTAGATTAGGGCAACAAGTACTGCAAGA...ATATATGGACACACAGTCACGCAAGCTAGTTCCCATGACTCCTGGATCTATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR GCA 90 bp ATTCATCACATCTTCTGCAGGGCAGCCACTCAATACGATACACCTGATGCAGAGTCATGGGAACTAGCTTaGGTGACTGTGTGTCCATAT +
Preference number: 4 (lower is better)
Translates to: IHHIFCRAATQYDTPDAESWELA*VTVCPY
Trigger: ATATGGACACACAGTCACGCAAGCTAGTTCCCATGA...CTCTGCATCAGGTGTATCGTATTGAGTGGCTGCCCTGCAGAAGATGTGATGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR CCA 90 bp TTGTACTACAGGATAATTCATCACATCTTCTGCAGGGCAGCCACTCAATACGATCGGTTGAGTCGCTTCTaGACGTTCTTGGCGAAGATG +
Preference number: 4 (lower is better)
Translates to: LYYRIIHHIFCRAATQYDRLSRF*TFLAKM
Trigger: CATCTTCGCCAAGAACGTCCAGAAGCGACTCAACCG...ATCGTATTGAGTGGCTGCCCTGCAGAAGATGTGATGAATTATCCTGTAGTACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR CCA 90 bp GAAAGCTACTTTAGAATTGGTGGGAGGGGATCAAGTACAAGAGTCTCCACAGCTTCGGGTGAAGTTCTCTaGAAAGAGGCCTTTGTAGGT +
Preference number: 4 (lower is better)
Translates to: ESYFRIGGRGSSTRVSTASGEVL*KEAFVG
Trigger: ACCTACAAAGGCCTCTTTCCAGAGAACTTCACCCGA...AGCTGTGGAGACTCTTGTACTTGATCCCCTCCCACCAATTCTAAAGTAGCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR GCA 90 bp GGGGATCAAGTACAAGAGTCTCCACAGCTTGGACAAAGCACAAACAAACCTGTTAAGTCTGGTACCCTCTaGTTCTTGCCGTTTGAAGTT +
Preference number: 4 (lower is better)
Translates to: GDQVQESPQLGQSTNKPVKSGTL*FLPFEV
Trigger: AACTTCAAACGGCAAGAAGCAGAGGGTACCAGACTT...AACAGGTTTGTTTGTGCTTTGTCCAAGCTGTGGAGACTCTTGTACTTGATCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR GCA 90 bp CACATAGATCCAGGAGTCATGGGAACTAGCTTGCGTGACTGTGTGTCCATATATAAGTCTGGTACCCTCTaGTTCTTGCCGTTTGAAGTT +
Preference number: 4 (lower is better)
Translates to: HIDPGVMGTSLRDCVSIYKSGTL*FLPFEV
Trigger: AACTTCAAACGGCAAGAAGCAGAGGGTACCAGACTT...ATATATGGACACACAGTCACGCAAGCTAGTTCCCATGACTCCTGGATCTATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR GCA 90 bp AGTCTCCACAGCTTGGACAAAGCACAAACAAACCTGTTATTGACAACATGGGAATTCATGGAGGCCTCCTaGATGCCTTTGATTGCTGCT +
Preference number: 4 (lower is better)
Translates to: SLHSLDKAQTNLLLTTWEFMEAS*MPLIAA
Trigger: AGCAGCAATCAAAGGCATGCAGGAGGCCTCCATGAA...TTCCCATGTTGTCAATAACAGGTTTGTTTGTGCTTTGTCCAAGCTGTGGAGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR GCA 90 bp GAGTCTCCACAGCTTGGACAAAGCACAAACAAACCTGTTATTGACAACATGGGATGCTGCGCTTGGCGATaGGATTCTTTATGTCAGGAA +
Preference number: 4 (lower is better)
Translates to: ESPQLGQSTNKPVIDNMGCCAWR*DSLCQE
Trigger: TTCCTGACATAAAGAATCGCATCGCCAAGCGCAGCA...TCCCATGTTGTCAATAACAGGTTTGTTTGTGCTTTGTCCAAGCTGTGGAGACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR GCA 90 bp GATAATCTTGTACTACAGGATAATTCATCACATCTTCTGCAGGGCAGCCACTCAATGATGTTCTCCTGCTaGAGTTCCTTTGTCGGGGTG +
Preference number: 4 (lower is better)
Translates to: DNLVLQDNSSHLLQGSHSMMFSC*SSFVGV
Trigger: CACCCCGACAAAGGAACTGCAGCAGGAGAACATCAT...TGAGTGGCTGCCCTGCAGAAGATGTGATGAATTATCCTGTAGTACAAGATTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR GCA 90 bp AGTCTCCACAGCTTGGACAAAGCACAAACAAACCTGTTATTGACAACATGGGAAATGATGTTCTCCTGCTaGAGTTCCTTTGTCGGGGTG +
Preference number: 4 (lower is better)
Translates to: SLHSLDKAQTNLLLTTWEMMFSC*SSFVGV
Trigger: CACCCCGACAAAGGAACTGCAGCAGGAGAACATCAT...TTCCCATGTTGTCAATAACAGGTTTGTTTGTGCTTTGTCCAAGCTGTGGAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR GCA 90 bp GATAATCTTGTACTACAGGATAATTCATCACATCTTCTGCAGGGCAGCCACTCACTGATGATGTTCTCCTaGTGCAGTTCCTTTGTCGGG +
Preference number: 4 (lower is better)
Translates to: DNLVLQDNSSHLLQGSHSLMMFS*CSSFVG
Trigger: CCCGACAAAGGAACTGCAGCAGGAGAACATCATCAG...TGAGTGGCTGCCCTGCAGAAGATGTGATGAATTATCCTGTAGTACAAGATTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR GCA 90 bp GACAGAATAAGAGCAATGCATGTATCAATGACAATTGAGAGGCAAAGAGCTACATGCTTCGAGCTCCTCTaGTTCAGGTTGGGCACTCTC +
Preference number: 4 (lower is better)
Translates to: DRIRAMHVSMTIERQRATCFELL*FRLGTL
Trigger: GAGAGTGCCCAACCTGAAGCAGAGGAGCTCGAAGCA...TGTAGCTCTTTGCCTCTCAATTGTCATTGATACATGCATTGCTCTTATTCTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR GCA 90 bp CACATAGATCCAGGAGTCATGGGAACTAGCTTGCGTGACTGTGTGTCCATATATATTCATCACATCTTCTaGAGGGCAGCCACTCAATAC +
Preference number: 4 (lower is better)
Translates to: HIDPGVMGTSLRDCVSIYIHHIF*RAATQY
Trigger: GTATTGAGTGGCTGCCCTGCAGAAGATGTGATGAAT...ATATATGGACACACAGTCACGCAAGCTAGTTCCCATGACTCCTGGATCTATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR CCA 90 bp AGTCTCCACAGCTTGGACAAAGCACAAACAAACCTGTTATTGACAACATGGGAATCTCATCCTTCCTCTTaGAGCTCTGCAGAGCTTCCA +
Preference number: 4 (lower is better)
Translates to: SLHSLDKAQTNLLLTTWESHPSS*SSAELP
Trigger: TGGAAGCTCTGCAGAGCTCCAAGAGGAAGGATGAGA...TTCCCATGTTGTCAATAACAGGTTTGTTTGTGCTTTGTCCAAGCTGTGGAGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR CCA 90 bp TCTGATCTGGAGAAAGCTACTTTAGAATTGGTGGGAGGGGATCAAGTACAAGAGTCAGGGACTTCATTCTaGGAAGGTGTTGTCACACTG +
Preference number: 4 (lower is better)
Translates to: SDLEKATLELVGGDQVQESGTSF*EGVVTL
Trigger: CAGTGTGACAACACCTTCCCAGAATGAAGTCCCTGA...CTCTTGTACTTGATCCCCTCCCACCAATTCTAAAGTAGCTTTCTCCAGATCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR CCA 90 bp GAGTCTCCACAGCTTGGACAAAGCACAAACAAACCTGTTATTGACAACATGGGACTTTTGCCAATGGGATaGCTGGTTTTGCCATTAGGC +
Preference number: 4 (lower is better)
Translates to: ESPQLGQSTNKPVIDNMGLLPMG*LVLPLG
Trigger: GCCTAATGGCAAAACCAGCCATCCCATTGGCAAAAG...TCCCATGTTGTCAATAACAGGTTTGTTTGTGCTTTGTCCAAGCTGTGGAGACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR CCA 90 bp AGTCTCCACAGCTTGGACAAAGCACAAACAAACCTGTTATTGACAACATGGGAATTTTGGCTCTGTGGGTaGAGCCTGTTCAGATTCAGC +
Preference number: 4 (lower is better)
Translates to: SLHSLDKAQTNLLLTTWEFWLCG*SLFRFS
Trigger: GCTGAATCTGAACAGGCTCCACCCACAGAGCCAAAA...TTCCCATGTTGTCAATAACAGGTTTGTTTGTGCTTTGTCCAAGCTGTGGAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356264.7
3UTR CAA 72 bp TGGTGGGAGGGGATCAAGTACAAGAGTCTCCACAGCTaGGACAAAGCACAAACAAACCTGTTATTGACAACA +
Preference number: 4 (lower is better)
Translates to: WWEGIKYKSLHS*DKAQTNLLLTT
Trigger: TGTTGTCAATAACAGGTTTGTTTGTGCTTTGTCCAAGCTGTGGAGACTCTTGTACTTGATCCCCTCCCACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
3UTR CAA 72 bp CACGTGCTCACACCTGGGCAGGGGAATAAGATAATCTaGTACTACAGGATAATTCATCACATCTTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: HVLTPGQGNKII*YYRIIHHIFCR
Trigger: CCTGCAGAAGATGTGATGAATTATCCTGTAGTACAAGATTATCTTATTCCCCTGCCCAGGTGTGAGCACGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR TCA 90 bp CTTGGACAAAGCACAAACAAACCTGTTATTGACAACATGGGAATGAGTGAGGATGCAGGTGCTAATGTATaGTTTGGACTTGCTGTCGGG +
Preference number: 4 (lower is better)
Translates to: LGQSTNKPVIDNMGMSEDAGANV*FGLAVG
Trigger: CCCGACAGCAAGTCCAAATCATACATTAGCACCTGC...ATCCTCACTCATTCCCATGTTGTCAATAACAGGTTTGTTTGTGCTTTGTCCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR TCA 90 bp TGCATACACATAGATCCAGGAGTCATGGGAACTAGCTTGCGTGACTGTGTGTCCTGTATCAATGACAATTaGGAGGCAAAGAGCTACAAT +
Preference number: 4 (lower is better)
Translates to: CIHIDPGVMGTSLRDCVSCINDN*EAKSYN
Trigger: ATTGTAGCTCTTTGCCTCTCAATTGTCATTGATACA...GGACACACAGTCACGCAAGCTAGTTCCCATGACTCCTGGATCTATGTGTATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR GCA 90 bp TTGTACTACAGGATAATTCATCACATCTTCTGCAGGGCAGCCACTCAATACGATTGCTGCGCTTGGCGATaGGATTCTTTATGTCAGGAA +
Preference number: 4 (lower is better)
Translates to: LYYRIIHHIFCRAATQYDCCAWR*DSLCQE
Trigger: TTCCTGACATAAAGAATCGCATCGCCAAGCGCAGCA...ATCGTATTGAGTGGCTGCCCTGCAGAAGATGTGATGAATTATCCTGTAGTACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR GCA 90 bp GACAGAATAAGAGCAATGCATGTATCAATGACAATTGAGAGGCAAAGAGCTACAAGGTTGGGCACTCTCTaGACCCTCAGTGGTTTCAGT +
Preference number: 4 (lower is better)
Translates to: DRIRAMHVSMTIERQRATRLGTL*TLSGFS
Trigger: ACTGAAACCACTGAGGGTGCAGAGAGTGCCCAACCT...TGTAGCTCTTTGCCTCTCAATTGTCATTGATACATGCATTGCTCTTATTCTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR GCA 90 bp TCTGATCTGGAGAAAGCTACTTTAGAATTGGTGGGAGGGGATCAAGTACAAGAGGGTCTCCTTGGGCTCTaGACCTATAGTTATTTCGTT +
Preference number: 4 (lower is better)
Translates to: SDLEKATLELVGGDQVQEGLLGL*TYSYFV
Trigger: AACGAAATAACTATAGGTGCAGAGCCCAAGGAGACC...CTCTTGTACTTGATCCCCTCCCACCAATTCTAAAGTAGCTTTCTCCAGATCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR GCA 90 bp TGCATACACATAGATCCAGGAGTCATGGGAACTAGCTTGCGTGACTGTGTGTCCAAGTTCATCAGAATTTaGTGCCTCAAAATCATGCAG +
Preference number: 4 (lower is better)
Translates to: CIHIDPGVMGTSLRDCVSKFIRI*CLKIMQ
Trigger: CTGCATGATTTTGAGGCAGCAAATTCTGATGAACTT...GGACACACAGTCACGCAAGCTAGTTCCCATGACTCCTGGATCTATGTGTATGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR GCA 90 bp GTTTTAAACATAGTAAACCTGAAAGGGAGCGAGAGCACGTGCTCACACCTGGGCTCTCATCCTGAAAACTaGACAGTACAAACACAGATA +
Preference number: 4 (lower is better)
Translates to: VLNIVNLKGSESTCSHLGSHPEN*TVQTQI
Trigger: TATCTGTGTTTGTACTGTGCAGTTTTCAGGATGAGA...GCCCAGGTGTGAGCACGTGCTCTCGCTCCCTTTCAGGTTTACTATGTTTAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR GCA 90 bp GAGTCTCCACAGCTTGGACAAAGCACAAACAAACCTGTTATTGACAACATGGGACAGATTCAGCCAAGTTaGAGATCATACTCTGGTCTG +
Preference number: 4 (lower is better)
Translates to: ESPQLGQSTNKPVIDNMGQIQPS*RSYSGL
Trigger: CAGACCAGAGTATGATCTGCAACTTGGCTGAATCTG...TCCCATGTTGTCAATAACAGGTTTGTTTGTGCTTTGTCCAAGCTGTGGAGACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356264.7
CDS-3UTR CCA 90 bp TATGTAGCCTTCTGCATACACATAGATCCAGGAGTCATGGGAACTAGCTTGCGTACTTCATACAGTTTGTaGCAAAGCACCGCAATTTCC +
Preference number: 4 (lower is better)
Translates to: YVAFCIHIDPGVMGTSLRTSYSL*QSTAIS
Trigger: GGAAATTGCGGTGCTTTGCCACAAACTGTATGAAGT...ACGCAAGCTAGTTCCCATGACTCCTGGATCTATGTGTATGCAGAAGGCTACATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR CCA 90 bp GTTTTAAACATAGTAAACCTGAAAGGGAGCGAGAGCACGTGCTCACACCTGGGCAATAATGAAGTATCCTaGGGCTGTGTGAATCCATTA +
Preference number: 4 (lower is better)
Translates to: VLNIVNLKGSESTCSHLGNNEVS*GCVNPL
Trigger: TAATGGATTCACACAGCCCCAGGATACTTCATTATT...GCCCAGGTGTGAGCACGTGCTCTCGCTCCCTTTCAGGTTTACTATGTTTAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR CCA 90 bp GCATCAGCTCCAGGTATGATCTCGCTCAGAATAGTCAATGAGCCAAACACTGGGAATAATGAAGTATCCTaGGGCTGTGTGAATCCATTA +
Preference number: 4 (lower is better)
Translates to: ASAPGMISLRIVNEPNTGNNEVS*GCVNPL
Trigger: TAATGGATTCACACAGCCCCAGGATACTTCATTATT...CCCAGTGTTTGGCTCATTGACTATTCTGAGCGAGATCATACCTGGAGCTGATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450124.1
CDS-3UTR CCA 90 bp CCTCAGTGGTTTCAGTTCCAATTTTGGCCTCCTCTAAACTTACTCCTTCCCCGGTTTCAGTTCCAATTTTaGCCTCCTCTAAACTTACTC +
Preference number: 4 (lower is better)
Translates to: PQWFQFQFWPPLNLLLPRFQFQF*PPLNLL
Trigger: GAGTAAGTTTAGAGGAGGCCAAAATTGGAACTGAAA...CCGGGGAAGGAGTAAGTTTAGAGGAGGCCAAAATTGGAACTGAAACCACTGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000450124.1
CDS-3UTR CCA 90 bp TTGTACTACAGGATAATTCATCACATCTTCTGCAGGGCAGCCACTCAATACGATAGAGGCCTTTGTAGGTaGCAAGGTCTCTGTACTGAA +
Preference number: 4 (lower is better)
Translates to: LYYRIIHHIFCRAATQYDRGLCR*QGLCTE
Trigger: TTCAGTACAGAGACCTTGCCACCTACAAAGGCCTCT...ATCGTATTGAGTGGCTGCCCTGCAGAAGATGTGATGAATTATCCTGTAGTACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR CCA 90 bp AGTCTCCACAGCTTGGACAAAGCACAAACAAACCTGTTATTGACAACATGGGAACTTTTGCCAATGGGATaGCTGGTTTTGCCATTAGGC +
Preference number: 4 (lower is better)
Translates to: SLHSLDKAQTNLLLTTWELLPMG*LVLPLG
Trigger: GCCTAATGGCAAAACCAGCCATCCCATTGGCAAAAG...TTCCCATGTTGTCAATAACAGGTTTGTTTGTGCTTTGTCCAAGCTGTGGAGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR TCA 90 bp GACAGAATAAGAGCAATGCATGTATCAATGACAATTGAGAGGCAAAGAGCTACACCATCCACGAGTTTTTaGTGGAAGTCTTCCCACAGC +
Preference number: 4 (lower is better)
Translates to: DRIRAMHVSMTIERQRATPSTSF*WKSSHS
Trigger: GCTGTGGGAAGACTTCCATCAAAAACTCGTGGATGG...TGTAGCTCTTTGCCTCTCAATTGTCATTGATACATGCATTGCTCTTATTCTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR TCA 90 bp GACAGAATAAGAGCAATGCATGTATCAATGACAATTGAGAGGCAAAGAGCTACAGTGTCACCTCGGGCTTaGAAGGATCAAAGTCCAGAT +
Preference number: 4 (lower is better)
Translates to: DRIRAMHVSMTIERQRATVSPRA*KDQSPD
Trigger: ATCTGGACTTTGATCCTTTCAAGCCCGAGGTGACAC...TGTAGCTCTTTGCCTCTCAATTGTCATTGATACATGCATTGCTCTTATTCTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR TCA 90 bp TTGTACTACAGGATAATTCATCACATCTTCTGCAGGGCAGCCACTCAATACGATGGTCTGTCTGCATTGTaGATAATGAAGTATCCTGGG +
Preference number: 4 (lower is better)
Translates to: LYYRIIHHIFCRAATQYDGLSAL*IMKYPG
Trigger: CCCAGGATACTTCATTATTCACAATGCAGACAGACC...ATCGTATTGAGTGGCTGCCCTGCAGAAGATGTGATGAATTATCCTGTAGTACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR TCA 90 bp ATTCATCACATCTTCTGCAGGGCAGCCACTCAATACGATACACCTGATGCAGAGGTTGGAAAAGAACATTaGGAACTTTTGCAGCAGTTT +
Preference number: 4 (lower is better)
Translates to: IHHIFCRAATQYDTPDAEVGKEH*ELLQQF
Trigger: AAACTGCTGCAAAAGTTCTCAATGTTCTTTTCCAAC...CTCTGCATCAGGTGTATCGTATTGAGTGGCTGCCCTGCAGAAGATGTGATGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR TCA 90 bp ATTCATCACATCTTCTGCAGGGCAGCCACTCAATACGATACACCTGATGCAGAGTGTATCAATGACAATTaGGAGGCAAAGAGCTACAAT +
Preference number: 4 (lower is better)
Translates to: IHHIFCRAATQYDTPDAECINDN*EAKSYN
Trigger: ATTGTAGCTCTTTGCCTCTCAATTGTCATTGATACA...CTCTGCATCAGGTGTATCGTATTGAGTGGCTGCCCTGCAGAAGATGTGATGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR TCA 90 bp TATGTAGCCTTCTGCATACACATAGATCCAGGAGTCATGGGAACTAGCTTGCGTCAATGCATGTATCAATaGCAATTGAGAGGCAAAGAG +
Preference number: 4 (lower is better)
Translates to: YVAFCIHIDPGVMGTSLRQCMYQ*QLRGKE
Trigger: CTCTTTGCCTCTCAATTGTCATTGATACATGCATTG...ACGCAAGCTAGTTCCCATGACTCCTGGATCTATGTGTATGCAGAAGGCTACATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR TCA 90 bp GGGGATCAAGTACAAGAGTCTCCACAGCTTGGACAAAGCACAAACAAACCTGTTCAATGCATGTATCAATaGCAATTGAGAGGCAAAGAG +
Preference number: 4 (lower is better)
Translates to: GDQVQESPQLGQSTNKPVQCMYQ*QLRGKE
Trigger: CTCTTTGCCTCTCAATTGTCATTGATACATGCATTG...AACAGGTTTGTTTGTGCTTTGTCCAAGCTGTGGAGACTCTTGTACTTGATCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR TCA 90 bp TCTGATCTGGAGAAAGCTACTTTAGAATTGGTGGGAGGGGATCAAGTACAAGAGTCTGTCATCTCATCCTaGAAACTGCACAGTACAAAC +
Preference number: 4 (lower is better)
Translates to: SDLEKATLELVGGDQVQESVISS*KLHSTN
Trigger: GTTTGTACTGTGCAGTTTTCAGGATGAGATGACAGA...CTCTTGTACTTGATCCCCTCCCACCAATTCTAAAGTAGCTTTCTCCAGATCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR GCA 90 bp CTTGGACAAAGCACAAACAAACCTGTTATTGACAACATGGGAATGAGTGAGGATGTACCCTCTGCTTCTTaGCGTTTGAAGTTCTGGACA +
Preference number: 4 (lower is better)
Translates to: LGQSTNKPVIDNMGMSEDVPSAS*RLKFWT
Trigger: TGTCCAGAACTTCAAACGGCAAGAAGCAGAGGGTAC...ATCCTCACTCATTCCCATGTTGTCAATAACAGGTTTGTTTGTGCTTTGTCCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR GCA 90 bp AGTCTCCACAGCTTGGACAAAGCACAAACAAACCTGTTATTGACAACATGGGAAATTCATCACATCTTCTaGAGGGCAGCCACTCAATAC +
Preference number: 4 (lower is better)
Translates to: SLHSLDKAQTNLLLTTWEIHHIF*RAATQY
Trigger: GTATTGAGTGGCTGCCCTGCAGAAGATGTGATGAAT...TTCCCATGTTGTCAATAACAGGTTTGTTTGTGCTTTGTCCAAGCTGTGGAGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR GCA 90 bp CACATAGATCCAGGAGTCATGGGAACTAGCTTGCGTGACTGTGTGTCCATATATGTATATGTAGCCTTCTaGATACACATAGATCCAGGA +
Preference number: 4 (lower is better)
Translates to: HIDPGVMGTSLRDCVSIYVYVAF*IHIDPG
Trigger: TCCTGGATCTATGTGTATGCAGAAGGCTACATATAC...ATATATGGACACACAGTCACGCAAGCTAGTTCCCATGACTCCTGGATCTATGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR GCA 90 bp GAGTCTCCACAGCTTGGACAAAGCACAAACAAACCTGTTATTGACAACATGGGAGCCATTAGGCAAAACTaGAATTGTAATGCCAGACAG +
Preference number: 4 (lower is better)
Translates to: ESPQLGQSTNKPVIDNMGAIRQN*NCNARQ
Trigger: CTGTCTGGCATTACAATTGCAGTTTTGCCTAATGGC...TCCCATGTTGTCAATAACAGGTTTGTTTGTGCTTTGTCCAAGCTGTGGAGACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR CCA 90 bp ATTCATCACATCTTCTGCAGGGCAGCCACTCAATACGATACACCTGATGCAGAGTTTCAGTTCCAATTTTaGCCTCCTCTAAACTTACTC +
Preference number: 4 (lower is better)
Translates to: IHHIFCRAATQYDTPDAEFQFQF*PPLNLL
Trigger: GAGTAAGTTTAGAGGAGGCCAAAATTGGAACTGAAA...CTCTGCATCAGGTGTATCGTATTGAGTGGCTGCCCTGCAGAAGATGTGATGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR CCA 90 bp TATGTAGCCTTCTGCATACACATAGATCCAGGAGTCATGGGAACTAGCTTGCGTTTCCCAAGGTTTGTCTaGCATCAGTCTGTAAATCAT +
Preference number: 4 (lower is better)
Translates to: YVAFCIHIDPGVMGTSLRFPRFV*HQSVNH
Trigger: ATGATTTACAGACTGATGCCAGACAAACCTTGGGAA...ACGCAAGCTAGTTCCCATGACTCCTGGATCTATGTGTATGCAGAAGGCTACATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR CCA 90 bp GGGGATCAAGTACAAGAGTCTCCACAGCTTGGACAAAGCACAAACAAACCTGTTTTCCCAAGGTTTGTCTaGCATCAGTCTGTAAATCAT +
Preference number: 4 (lower is better)
Translates to: GDQVQESPQLGQSTNKPVFPRFV*HQSVNH
Trigger: ATGATTTACAGACTGATGCCAGACAAACCTTGGGAA...AACAGGTTTGTTTGTGCTTTGTCCAAGCTGTGGAGACTCTTGTACTTGATCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
3UTR CAA 72 bp ATACTGTTGACTCTTTTGCCAATGGGATGGCTGGTTTaGCCATTAGGCAAAACTGCAATTGTAATGCCAGAC +
Preference number: 4 (lower is better)
Translates to: ILLTLLPMGWLV*PLGKTAIVMPD
Trigger: GTCTGGCATTACAATTGCAGTTTTGCCTAATGGCAAAACCAGCCATCCCATTGGCAAAAGAGTCAACAGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
3UTR CAA 72 bp AACTGCACAGTACAAACACAGATACTGTTGACTCTTTaGCCAATGGGATGGCTGGTTTTGCCATTAGGCAAA +
Preference number: 4 (lower is better)
Translates to: NCTVQTQILLTL*PMGWLVLPLGK
Trigger: TTTGCCTAATGGCAAAACCAGCCATCCCATTGGCAAAAGAGTCAACAGTATCTGTGTTTGTACTGTGCAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR TCA 90 bp GACAGAATAAGAGCAATGCATGTATCAATGACAATTGAGAGGCAAAGAGCTACACCTCCTGCATGCCTTTaGTTGCTGCTAAATATCCTC +
Preference number: 4 (lower is better)
Translates to: DRIRAMHVSMTIERQRATPPACL*LLLNIL
Trigger: GAGGATATTTAGCAGCAATCAAAGGCATGCAGGAGG...TGTAGCTCTTTGCCTCTCAATTGTCATTGATACATGCATTGCTCTTATTCTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR TCA 90 bp TCTGATCTGGAGAAAGCTACTTTAGAATTGGTGGGAGGGGATCAAGTACAAGAGAAGGTGTTGTCACACTaGTTTCTGGAACAAAGTTGT +
Preference number: 4 (lower is better)
Translates to: SDLEKATLELVGGDQVQEKVLSH*FLEQSC
Trigger: ACAACTTTGTTCCAGAAATCAGTGTGACAACACCTT...CTCTTGTACTTGATCCCCTCCCACCAATTCTAAAGTAGCTTTCTCCAGATCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR TCA 90 bp GAAAGCTACTTTAGAATTGGTGGGAGGGGATCAAGTACAAGAGTCTCCACAGCTTCAATACGATACACCTaGTGCAGAGAAATTAAAGTC +
Preference number: 4 (lower is better)
Translates to: ESYFRIGGRGSSTRVSTASIRYT*CREIKV
Trigger: GACTTTAATTTCTCTGCATCAGGTGTATCGTATTGA...AGCTGTGGAGACTCTTGTACTTGATCCCCTCCCACCAATTCTAAAGTAGCTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR TCA 90 bp GGGGATCAAGTACAAGAGTCTCCACAGCTTGGACAAAGCACAAACAAACCTGTTGTTGGAAAAGAACATTaGGAACTTTTGCAGCAGTTT +
Preference number: 4 (lower is better)
Translates to: GDQVQESPQLGQSTNKPVVGKEH*ELLQQF
Trigger: AAACTGCTGCAAAAGTTCTCAATGTTCTTTTCCAAC...AACAGGTTTGTTTGTGCTTTGTCCAAGCTGTGGAGACTCTTGTACTTGATCCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR GCA 90 bp GAGTCTCCACAGCTTGGACAAAGCACAAACAAACCTGTTATTGACAACATGGGACTGAAATTCTTCTTCTaGCTTAGAGATTCGACTCTC +
Preference number: 4 (lower is better)
Translates to: ESPQLGQSTNKPVIDNMGLKFFF*LRDSTL
Trigger: GAGAGTCGAATCTCTAAGGCAGAAGAAGAATTTCAG...TCCCATGTTGTCAATAACAGGTTTGTTTGTGCTTTGTCCAAGCTGTGGAGACTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR GCA 90 bp TCTGATCTGGAGAAAGCTACTTTAGAATTGGTGGGAGGGGATCAAGTACAAGAGCTGAAATTCTTCTTCTaGCTTAGAGATTCGACTCTC +
Preference number: 4 (lower is better)
Translates to: SDLEKATLELVGGDQVQELKFFF*LRDSTL
Trigger: GAGAGTCGAATCTCTAAGGCAGAAGAAGAATTTCAG...CTCTTGTACTTGATCCCCTCCCACCAATTCTAAAGTAGCTTTCTCCAGATCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR GCA 90 bp GGGGATCAAGTACAAGAGTCTCCACAGCTTGGACAAAGCACAAACAAACCTGTTTTCATCAGAATTTGCTaGCTCAAAATCATGCAGTGT +
Preference number: 4 (lower is better)
Translates to: GDQVQESPQLGQSTNKPVFIRIC*LKIMQC
Trigger: ACACTGCATGATTTTGAGGCAGCAAATTCTGATGAA...AACAGGTTTGTTTGTGCTTTGTCCAAGCTGTGGAGACTCTTGTACTTGATCCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR GCA 90 bp AGTCTCCACAGCTTGGACAAAGCACAAACAAACCTGTTATTGACAACATGGGAAGCCATTAGGCAAAACTaGAATTGTAATGCCAGACAG +
Preference number: 4 (lower is better)
Translates to: SLHSLDKAQTNLLLTTWEAIRQN*NCNARQ
Trigger: CTGTCTGGCATTACAATTGCAGTTTTGCCTAATGGC...TTCCCATGTTGTCAATAACAGGTTTGTTTGTGCTTTGTCCAAGCTGTGGAGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR CCA 90 bp GGGGATCAAGTACAAGAGTCTCCACAGCTTGGACAAAGCACAAACAAACCTGTTTTTCAGTTCCAATTTTaGCCTCCTCTAAACTTACTC +
Preference number: 4 (lower is better)
Translates to: GDQVQESPQLGQSTNKPVFQFQF*PPLNLL
Trigger: GAGTAAGTTTAGAGGAGGCCAAAATTGGAACTGAAA...AACAGGTTTGTTTGTGCTTTGTCCAAGCTGTGGAGACTCTTGTACTTGATCCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
3UTR CAA 72 bp AAATTAAAGTCTGATCTGGAGAAAGCTACTTTAGAATaGGTGGGAGGGGATCAAGTACAAGAGTCTCCACAG +
Preference number: 4 (lower is better)
Translates to: KLKSDLEKATLE*VGGDQVQESPQ
Trigger: CTGTGGAGACTCTTGTACTTGATCCCCTCCCACCAATTCTAAAGTAGCTTTCTCCAGATCAGACTTTAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR TCA 90 bp TTGTACTACAGGATAATTCATCACATCTTCTGCAGGGCAGCCACTCAATACGATAAGGTGTTGTCACACTaGTTTCTGGAACAAAGTTGT +
Preference number: 4 (lower is better)
Translates to: LYYRIIHHIFCRAATQYDKVLSH*FLEQSC
Trigger: ACAACTTTGTTCCAGAAATCAGTGTGACAACACCTT...ATCGTATTGAGTGGCTGCCCTGCAGAAGATGTGATGAATTATCCTGTAGTACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR TCA 90 bp GATAATCTTGTACTACAGGATAATTCATCACATCTTCTGCAGGGCAGCCACTCAAAACACAGATACTGTTaGCTCTTTTGCCAATGGGAT +
Preference number: 4 (lower is better)
Translates to: DNLVLQDNSSHLLQGSHSKHRYC*LFCQWD
Trigger: ATCCCATTGGCAAAAGAGTCAACAGTATCTGTGTTT...TGAGTGGCTGCCCTGCAGAAGATGTGATGAATTATCCTGTAGTACAAGATTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR TCA 90 bp AGTCTCCACAGCTTGGACAAAGCACAAACAAACCTGTTATTGACAACATGGGAAAAACACAGATACTGTTaGCTCTTTTGCCAATGGGAT +
Preference number: 4 (lower is better)
Translates to: SLHSLDKAQTNLLLTTWEKHRYC*LFCQWD
Trigger: ATCCCATTGGCAAAAGAGTCAACAGTATCTGTGTTT...TTCCCATGTTGTCAATAACAGGTTTGTTTGTGCTTTGTCCAAGCTGTGGAGACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR GCA 90 bp TCTGATCTGGAGAAAGCTACTTTAGAATTGGTGGGAGGGGATCAAGTACAAGAGAAGTTCATCAGAATTTaGTGCCTCAAAATCATGCAG +
Preference number: 4 (lower is better)
Translates to: SDLEKATLELVGGDQVQEKFIRI*CLKIMQ
Trigger: CTGCATGATTTTGAGGCAGCAAATTCTGATGAACTT...CTCTTGTACTTGATCCCCTCCCACCAATTCTAAAGTAGCTTTCTCCAGATCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR GCA 90 bp GACAGAATAAGAGCAATGCATGTATCAATGACAATTGAGAGGCAAAGAGCTACATCATGGGAACTAGCTTaGGTGACTGTGTGTCCATAT +
Preference number: 4 (lower is better)
Translates to: DRIRAMHVSMTIERQRATSWELA*VTVCPY
Trigger: ATATGGACACACAGTCACGCAAGCTAGTTCCCATGA...TGTAGCTCTTTGCCTCTCAATTGTCATTGATACATGCATTGCTCTTATTCTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR GCA 90 bp TCTGATCTGGAGAAAGCTACTTTAGAATTGGTGGGAGGGGATCAAGTACAAGAGATACTCTGGTCTGTCTaGATTGTGAATAATGAAGTA +
Preference number: 4 (lower is better)
Translates to: SDLEKATLELVGGDQVQEILWSV*IVNNEV
Trigger: TACTTCATTATTCACAATGCAGACAGACCAGAGTAT...CTCTTGTACTTGATCCCCTCCCACCAATTCTAAAGTAGCTTTCTCCAGATCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR GCA 90 bp AGTCTCCACAGCTTGGACAAAGCACAAACAAACCTGTTATTGACAACATGGGAATTCATCAGAATTTGCTaGCTCAAAATCATGCAGTGT +
Preference number: 4 (lower is better)
Translates to: SLHSLDKAQTNLLLTTWEFIRIC*LKIMQC
Trigger: ACACTGCATGATTTTGAGGCAGCAAATTCTGATGAA...TTCCCATGTTGTCAATAACAGGTTTGTTTGTGCTTTGTCCAAGCTGTGGAGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR GCA 90 bp TTGTACTACAGGATAATTCATCACATCTTCTGCAGGGCAGCCACTCAATACGATTCTCATCCTGAAAACTaGACAGTACAAACACAGATA +
Preference number: 4 (lower is better)
Translates to: LYYRIIHHIFCRAATQYDSHPEN*TVQTQI
Trigger: TATCTGTGTTTGTACTGTGCAGTTTTCAGGATGAGA...ATCGTATTGAGTGGCTGCCCTGCAGAAGATGTGATGAATTATCCTGTAGTACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR CCA 90 bp TTGTACTACAGGATAATTCATCACATCTTCTGCAGGGCAGCCACTCAATACGATAATAATGAAGTATCCTaGGGCTGTGTGAATCCATTA +
Preference number: 4 (lower is better)
Translates to: LYYRIIHHIFCRAATQYDNNEVS*GCVNPL
Trigger: TAATGGATTCACACAGCCCCAGGATACTTCATTATT...ATCGTATTGAGTGGCTGCCCTGCAGAAGATGTGATGAATTATCCTGTAGTACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR CCA 90 bp CTTGGACAAAGCACAAACAAACCTGTTATTGACAACATGGGAATGAGTGAGGATTGTCACACTGATTTCTaGAACAAAGTTGTCCTCAAA +
Preference number: 4 (lower is better)
Translates to: LGQSTNKPVIDNMGMSEDCHTDF*NKVVLK
Trigger: TTTGAGGACAACTTTGTTCCAGAAATCAGTGTGACA...ATCCTCACTCATTCCCATGTTGTCAATAACAGGTTTGTTTGTGCTTTGTCCAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR CCA 90 bp GACAGAATAAGAGCAATGCATGTATCAATGACAATTGAGAGGCAAAGAGCTACATTGCAGATCATACTCTaGTCTGTCTGCATTGTGAAT +
Preference number: 4 (lower is better)
Translates to: DRIRAMHVSMTIERQRATLQIIL*SVCIVN
Trigger: ATTCACAATGCAGACAGACCAGAGTATGATCTGCAA...TGTAGCTCTTTGCCTCTCAATTGTCATTGATACATGCATTGCTCTTATTCTGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR TCA 90 bp GACAGAATAAGAGCAATGCATGTATCAATGACAATTGAGAGGCAAAGAGCTACATCAATACGATACACCTaGTGCAGAGAAATTAAAGTC +
Preference number: 4 (lower is better)
Translates to: DRIRAMHVSMTIERQRATSIRYT*CREIKV
Trigger: GACTTTAATTTCTCTGCATCAGGTGTATCGTATTGA...TGTAGCTCTTTGCCTCTCAATTGTCATTGATACATGCATTGCTCTTATTCTGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR GCA 90 bp GACAGAATAAGAGCAATGCATGTATCAATGACAATTGAGAGGCAAAGAGCTACAATACTCTGGTCTGTCTaGATTGTGAATAATGAAGTA +
Preference number: 4 (lower is better)
Translates to: DRIRAMHVSMTIERQRATILWSV*IVNNEV
Trigger: TACTTCATTATTCACAATGCAGACAGACCAGAGTAT...TGTAGCTCTTTGCCTCTCAATTGTCATTGATACATGCATTGCTCTTATTCTGTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS TCA 90 bp GGTGACCGAGGCCGTGCTGGTGCGGGAGACGCAGGTGCTAATGTATaGTTTGGACTTGCTGTCGGGCTCGGGAGGGGTGAAGGCTCCTCA +
Preference number: 5 (lower is better)
Translates to: GDRGRAGAGDAGANV*FGLAVGLGRGEGSS
Trigger: TGAGGAGCCTTCACCCCTCCCGAGCCCGACAGCAAGTCCAAATCATACATTAGCACCTGCGTCTCCCGCACCAGCACGGCCTCGGTCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325590.9
ENST00000356264.7
ENST00000441628.5
CDS-3UTR CAA 90 bp TTTTGGCCTCCTCTAAACTTACTCCTTCCCCGGCAGGGACAGTGGCCTTCTCCGCCTCCGGCGCAGGCTTaGGGGGCAGTTGTTCATTTC +
Preference number: 5 (lower is better)
Translates to: FWPPLNLLLPRQGQWPSPPPAQA*GAVVHF
Trigger: GAAATGAACAACTGCCCCCAAAGCCTGCGCCGGAGG...CGGAGAAGGCCACTGTCCCTGCCGGGGAAGGAGTAAGTTTAGAGGAGGCCAAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000450124.1
CDS GCA 90 bp GCTGTGTCCATGGCTGGCATGTCTGAGTCAAGTGGGTCATACAGCTaGTCCATCTCCACACAAGCAGCAATGGCAACTCCAGCCTCCGGC +
Preference number: 5 (lower is better)
Translates to: AVSMAGMSESSGSYS*SISTQAAMATPASG
Trigger: GCCGGAGGCTGGAGTTGCCATTGCTGCTTGTGTGGAGATGGAGCAGCTGTATGACCCACTTGACTCAGACATGCCAGCCATGGACACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000441628.5
ENST00000450124.1
ENST00000467580.5
ENST00000471913.5
CDS-3UTR CAA 90 bp CTGCTTAGCTGCCCATCCCAACTAGCCTACCTCCAGCCACAGCGGCTGGACAGCCCCATCCACGAGTTTTaGATGGAAGTCTTCCCACAG +
Preference number: 5 (lower is better)
Translates to: LLSCPSQLAYLQPQRLDSPIHEF*MEVFPQ
Trigger: CTGTGGGAAGACTTCCATCAAAAACTCGTGGATGGG...GCTGTCCAGCCGCTGTGGCTGGAGGTAGGCTAGTTGGGATGGGCAGCTAAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR CAA 90 bp TCCTCTAAACTTACTCCTTCCCCGGCAGGGACAGTGGCCTTCTCCGCCTCTGCTTCTCCTGAGGCACTGTaGCTTCGAGCTCCTCTGCTT +
Preference number: 5 (lower is better)
Translates to: SSKLTPSPAGTVAFSASASPEAL*LRAPLL
Trigger: AAGCAGAGGAGCTCGAAGCAACAGTGCCTCAGGAGA...AGCAGAGGCGGAGAAGGCCACTGTCCCTGCCGGGGAAGGAGTAAGTTTAGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450124.1
CDS CCA 90 bp AGTCAAGTGGGTCATACAGCTGCTCCATCTCCACACAAGCAGCAATaGCAACTCCAGCCTCCGGCGCAGGCTTTGGGGGCAGTTGTTCAT +
Preference number: 5 (lower is better)
Translates to: SQVGHTAAPSPHKQQ*QLQPPAQALGAVVH
Trigger: ATGAACAACTGCCCCCAAAGCCTGCGCCGGAGGCTGGAGTTGCCATTGCTGCTTGTGTGGAGATGGAGCAGCTGTATGACCCACTTGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000441628.5
ENST00000450124.1
ENST00000467580.5
ENST00000471913.5
CDS-3UTR CAA 90 bp CCCATCCCAACTAGCCTACCTCCAGCCACAGCGGCTGGACAGCTAGATAAATCATTTTCCTGCGCGCGGTaGAGTCGCTTCTGGACGTTC +
Preference number: 5 (lower is better)
Translates to: PIPTSLPPATAAGQLDKSFSCAR*SRFWTF
Trigger: GAACGTCCAGAAGCGACTCAACCGCGCGCAGGAAAA...TGATTTATCTAGCTGTCCAGCCGCTGTGGCTGGAGGTAGGCTAGTTGGGATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR CAA 90 bp CCCATCCCAACTAGCCTACCTCCAGCCACAGCGGCTGGACAGCTAGATAAATCAATCACTGGGCGCTCCTaGGATGGTGAAGGCCTTGTC +
Preference number: 5 (lower is better)
Translates to: PIPTSLPPATAAGQLDKSITGRS*DGEGLV
Trigger: GACAAGGCCTTCACCATCCAAGGAGCGCCCAGTGAT...TGATTTATCTAGCTGTCCAGCCGCTGTGGCTGGAGGTAGGCTAGTTGGGATGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR CAA 90 bp GCTTCGAGCTCCTCTGCTTCAGGTTGGGCACTCTCTGCACCCTCAGTGGTTTCACACTGGGGCGTTTTCTaGCTCCTGGGAAGATCGTGT +
Preference number: 5 (lower is better)
Translates to: ASSSSASGWALSAPSVVSHWGVF*LLGRSC
Trigger: ACACGATCTTCCCAGGAGCAAGAAAACGCCCCAGTG...TGAAACCACTGAGGGTGCAGAGAGTGCCCAACCTGAAGCAGAGGAGCTCGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450124.1
CDS-3UTR CAA 90 bp TGCATACACATAGATCCAGGAGTCATGGGAACTAGCTTGCGTGACTGTGTGTCCGCGAAGATGCCCGTCTaGATGTCGGCCATGGCTGCG +
Preference number: 5 (lower is better)
Translates to: CIHIDPGVMGTSLRDCVSAKMPV*MSAMAA
Trigger: CGCAGCCATGGCCGACATCAAGACGGGCATCTTCGC...GGACACACAGTCACGCAAGCTAGTTCCCATGACTCCTGGATCTATGTGTATGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR CAA 90 bp GTTTTAAACATAGTAAACCTGAAAGGGAGCGAGAGCACGTGCTCACACCTGGGCTGGATGGTGAAGGCCTaGTCGGCGTGCTGGTCACCC +
Preference number: 5 (lower is better)
Translates to: VLNIVNLKGSESTCSHLGWMVKA*SACWSP
Trigger: GGGTGACCAGCACGCCGACAAGGCCTTCACCATCCA...GCCCAGGTGTGAGCACGTGCTCTCGCTCCCTTTCAGGTTTACTATGTTTAAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR CAA 90 bp TGCTTCAGGTTGGGCACTCTCTGCACCCTCAGTGGTTTCAGTTCCAATTTTGGCACCACCAGAAGCCTTTaGACACGCCTCCACACCTGC +
Preference number: 5 (lower is better)
Translates to: CFRLGTLCTLSGFSSNFGTTRSL*TRLHTC
Trigger: GCAGGTGTGGAGGCGTGTCAAAAGGCTTCTGGTGGT...GCCAAAATTGGAACTGAAACCACTGAGGGTGCAGAGAGTGCCCAACCTGAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450124.1
CDS TCA 90 bp AAAGAGGCCTTTGTAGGTGGCAAGGTCTCTGTACTGAAGCCAGTCTaGTTCCTTCACTCCCACCAGCCAGCCTGCATCCTGATCAGCTTC +
Preference number: 5 (lower is better)
Translates to: KEAFVGGKVSVLKPV*FLHSHQPACILISF
Trigger: GAAGCTGATCAGGATGCAGGCTGGCTGGTGGGAGTGAAGGAATCAGACTGGCTTCAGTACAGAGACCTTGCCACCTACAAAGGCCTCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325590.9
ENST00000356264.7
ENST00000441628.5
CDS CCA 90 bp GAGGGACATGCAGAGTCTTCTCCAAACCCACCTGAGGTAACTTCTTaGCTGACCCTGTCTGTACTAGCGTCAGGGCCCCAAGTAAATGCA +
Preference number: 5 (lower is better)
Translates to: EGHAESSPNPPEVTS*LTLSVLASGPQVNA
Trigger: TGCATTTACTTGGGGCCCTGACGCTAGTACAGACAGGGTCAGCCAAGAAGTTACCTCAGGTGGGTTTGGAGAAGACTCTGCATGTCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441628.5
CDS TCA 90 bp GTGAGTGGGTCACTCCAGCAGAACCTGCAGGTGTCACCTCGGGCTTaGAAGGATCAAAGTCCAGATCCAGCAAAGTCTCCTCTTTCTTCA +
Preference number: 5 (lower is better)
Translates to: VSGSLQQNLQVSPRA*KDQSPDPAKSPLSS
Trigger: TGAAGAAAGAGGAGACTTTGCTGGATCTGGACTTTGATCCTTTCAAGCCCGAGGTGACACCTGCAGGTTCTGCTGGAGTGACCCACTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325590.9
ENST00000356264.7
ENST00000441628.5
CDS GCA 90 bp GGCCAGTCAGCAGACGAAAGCAGGCTGGTGGATAATCTTATGTCTTaGTCTGTTTCGGAGGGACATGCAGAGTCTTCTCCAAACCCACCT +
Preference number: 5 (lower is better)
Translates to: GQSADESRLVDNLMS*SVSEGHAESSPNPP
Trigger: AGGTGGGTTTGGAGAAGACTCTGCATGTCCCTCCGAAACAGAGCAAGACATAAGATTATCCACCAGCCTGCTTTCGTCTGCTGACTGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441628.5
CDS-3UTR CAA 90 bp TCTGATCTGGAGAAAGCTACTTTAGAATTGGTGGGAGGGGATCAAGTACAAGAGTGGATGGTGAAGGCCTaGTCGGCGTGCTGGTCACCC +
Preference number: 5 (lower is better)
Translates to: SDLEKATLELVGGDQVQEWMVKA*SACWSP
Trigger: GGGTGACCAGCACGCCGACAAGGCCTTCACCATCCA...CTCTTGTACTTGATCCCCTCCCACCAATTCTAAAGTAGCTTTCTCCAGATCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR CAA 90 bp TGCATACACATAGATCCAGGAGTCATGGGAACTAGCTTGCGTGACTGTGTGTCCATGTATGATTTGGACTaGCTGTCGGGCTCGGGAGGG +
Preference number: 5 (lower is better)
Translates to: CIHIDPGVMGTSLRDCVSMYDLD*LSGSGG
Trigger: CCCTCCCGAGCCCGACAGCAAGTCCAAATCATACAT...GGACACACAGTCACGCAAGCTAGTTCCCATGACTCCTGGATCTATGTGTATGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR CAA 90 bp ATTCATCACATCTTCTGCAGGGCAGCCACTCAATACGATACACCTGATGCAGAGCAGGAGGCCCTTTCCTaGTCTGTGAAGGTGACCGAG +
Preference number: 5 (lower is better)
Translates to: IHHIFCRAATQYDTPDAEQEALS*SVKVTE
Trigger: CTCGGTCACCTTCACAGACAAGGAAAGGGCCTCCTG...CTCTGCATCAGGTGTATCGTATTGAGTGGCTGCCCTGCAGAAGATGTGATGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR CAA 90 bp GGGGATCAAGTACAAGAGTCTCCACAGCTTGGACAAAGCACAAACAAACCTGTTCTCCTCTGCTTCAGGTaGGGCACTCTCTGCACCCTC +
Preference number: 5 (lower is better)
Translates to: GDQVQESPQLGQSTNKPVLLCFR*GTLCTL
Trigger: GAGGGTGCAGAGAGTGCCCAACCTGAAGCAGAGGAG...AACAGGTTTGTTTGTGCTTTGTCCAAGCTGTGGAGACTCTTGTACTTGATCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR CAA 90 bp CTCTCTGCACCCTCAGTGGTTTCAGTTCCAATTTTGGCCTCCTCTAAACTTACTCTCCTCTGCTTCAGGTaGGGCACTCTCTGCACCCTC +
Preference number: 5 (lower is better)
Translates to: LSAPSVVSVPILASSKLTLLCFR*GTLCTL
Trigger: GAGGGTGCAGAGAGTGCCCAACCTGAAGCAGAGGAG...AGTAAGTTTAGAGGAGGCCAAAATTGGAACTGAAACCACTGAGGGTGCAGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450124.1
CDS-3UTR CAA 90 bp GTTTTAAACATAGTAAACCTGAAAGGGAGCGAGAGCACGTGCTCACACCTGGGCTCTCCTGAGGCACTGTaGCTTCGAGCTCCTCTGCTT +
Preference number: 5 (lower is better)
Translates to: VLNIVNLKGSESTCSHLGSPEAL*LRAPLL
Trigger: AAGCAGAGGAGCTCGAAGCAACAGTGCCTCAGGAGA...GCCCAGGTGTGAGCACGTGCTCTCGCTCCCTTTCAGGTTTACTATGTTTAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR CAA 90 bp GTTTTAAACATAGTAAACCTGAAAGGGAGCGAGAGCACGTGCTCACACCTGGGCCCTTCCTCTTCATGGTaGGAGGCAGGCTCTATGACC +
Preference number: 5 (lower is better)
Translates to: VLNIVNLKGSESTCSHLGPSSSW*EAGSMT
Trigger: GGTCATAGAGCCTGCCTCCAACCATGAAGAGGAAGG...GCCCAGGTGTGAGCACGTGCTCTCGCTCCCTTTCAGGTTTACTATGTTTAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR CAA 90 bp CCCATCCCAACTAGCCTACCTCCAGCCACAGCGGCTGGACAGCTAGATAAATCAATGGGATGGCTGGTTTaGCCATTAGGCAAAACTGCA +
Preference number: 5 (lower is better)
Translates to: PIPTSLPPATAAGQLDKSMGWLV*PLGKTA
Trigger: TGCAGTTTTGCCTAATGGCAAAACCAGCCATCCCAT...TGATTTATCTAGCTGTCCAGCCGCTGTGGCTGGAGGTAGGCTAGTTGGGATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS CCA 90 bp AGCAGAACTCTCAGTGCTAGCATTCCAGGAGGTCCCCAAAATCAATaGTCTTGCTATCTCCTGGCTTTGTTCCCAGCAGCTAGCAATGGC +
Preference number: 5 (lower is better)
Translates to: SRTLSASIPGGPQNQ*SCYLLALFPAASNG
Trigger: GCCATTGCTAGCTGCTGGGAACAAAGCCAGGAGATAGCAAGACCATTGATTTTGGGGACCTCCTGGAATGCTAGCACTGAGAGTTCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471913.5
CDS-3UTR CAA 90 bp TTGTACTACAGGATAATTCATCACATCTTCTGCAGGGCAGCCACTCAATACGATGCGAAGATGCCCGTCTaGATGTCGGCCATGGCTGCG +
Preference number: 5 (lower is better)
Translates to: LYYRIIHHIFCRAATQYDAKMPV*MSAMAA
Trigger: CGCAGCCATGGCCGACATCAAGACGGGCATCTTCGC...ATCGTATTGAGTGGCTGCCCTGCAGAAGATGTGATGAATTATCCTGTAGTACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR CAA 90 bp TATGTAGCCTTCTGCATACACATAGATCCAGGAGTCATGGGAACTAGCTTGCGTATCACTGGGCGCTCCTaGGATGGTGAAGGCCTTGTC +
Preference number: 5 (lower is better)
Translates to: YVAFCIHIDPGVMGTSLRITGRS*DGEGLV
Trigger: GACAAGGCCTTCACCATCCAAGGAGCGCCCAGTGAT...ACGCAAGCTAGTTCCCATGACTCCTGGATCTATGTGTATGCAGAAGGCTACATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR CAA 90 bp GAGTCTCCACAGCTTGGACAAAGCACAAACAAACCTGTTATTGACAACATGGGAGCGGTGATGGTGTCTTaGCAATGCGGAGAGGACCCG +
Preference number: 5 (lower is better)
Translates to: ESPQLGQSTNKPVIDNMGAVMVS*QCGEDP
Trigger: CGGGTCCTCTCCGCATTGCAAAGACACCATCACCGC...TCCCATGTTGTCAATAACAGGTTTGTTTGTGCTTTGTCCAAGCTGTGGAGACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR CAA 90 bp ATTCATCACATCTTCTGCAGGGCAGCCACTCAATACGATACACCTGATGCAGAGCCTTCCTCTTCATGGTaGGAGGCAGGCTCTATGACC +
Preference number: 5 (lower is better)
Translates to: IHHIFCRAATQYDTPDAEPSSSW*EAGSMT
Trigger: GGTCATAGAGCCTGCCTCCAACCATGAAGAGGAAGG...CTCTGCATCAGGTGTATCGTATTGAGTGGCTGCCCTGCAGAAGATGTGATGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR CAA 90 bp TCTGATCTGGAGAAAGCTACTTTAGAATTGGTGGGAGGGGATCAAGTACAAGAGCCTGAGAGGCCTCCCTaGCAGATGCTAGCTGGTCAG +
Preference number: 5 (lower is better)
Translates to: SDLEKATLELVGGDQVQEPERPP*QMLAGQ
Trigger: CTGACCAGCTAGCATCTGCAAGGGAGGCCTCTCAGG...CTCTTGTACTTGATCCCCTCCCACCAATTCTAAAGTAGCTTTCTCCAGATCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS GCA 90 bp ACTCTCAGTGCTAGCATTCCAGGAGGTCCCCAAAATCAATGGTCTTaGTATCTCCTGGCTTTGTTCCCAGCAGCTAGCAATGGCTTGTTC +
Preference number: 5 (lower is better)
Translates to: TLSASIPGGPQNQWS*YLLALFPAASNGLF
Trigger: GAACAAGCCATTGCTAGCTGCTGGGAACAAAGCCAGGAGATAGCAAGACCATTGATTTTGGGGACCTCCTGGAATGCTAGCACTGAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471913.5
CDS-3UTR CAA 90 bp AGTCTCCACAGCTTGGACAAAGCACAAACAAACCTGTTATTGACAACATGGGAAGCGGTGATGGTGTCTTaGCAATGCGGAGAGGACCCG +
Preference number: 5 (lower is better)
Translates to: SLHSLDKAQTNLLLTTWEAVMVS*QCGEDP
Trigger: CGGGTCCTCTCCGCATTGCAAAGACACCATCACCGC...TTCCCATGTTGTCAATAACAGGTTTGTTTGTGCTTTGTCCAAGCTGTGGAGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR CAA 90 bp GAGTCTCCACAGCTTGGACAAAGCACAAACAAACCTGTTATTGACAACATGGGACAGGAGGCCCTTTCCTaGTCTGTGAAGGTGACCGAG +
Preference number: 5 (lower is better)
Translates to: ESPQLGQSTNKPVIDNMGQEALS*SVKVTE
Trigger: CTCGGTCACCTTCACAGACAAGGAAAGGGCCTCCTG...TCCCATGTTGTCAATAACAGGTTTGTTTGTGCTTTGTCCAAGCTGTGGAGACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR CAA 90 bp GCTTCGAGCTCCTCTGCTTCAGGTTGGGCACTCTCTGCACCCTCAGTGGTTTCAGTTTCAGTTCCAATTTaGGCCTCCTCTAAACTTACT +
Preference number: 5 (lower is better)
Translates to: ASSSSASGWALSAPSVVSVSVPI*ASSKLT
Trigger: AGTAAGTTTAGAGGAGGCCAAAATTGGAACTGAAAC...TGAAACCACTGAGGGTGCAGAGAGTGCCCAACCTGAAGCAGAGGAGCTCGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450124.1
CDS-3UTR CAA 90 bp GATAATCTTGTACTACAGGATAATTCATCACATCTTCTGCAGGGCAGCCACTCACTCCTCTGCTTCAGGTaGGGCACTCTCTGCACCCTC +
Preference number: 5 (lower is better)
Translates to: DNLVLQDNSSHLLQGSHSLLCFR*GTLCTL
Trigger: GAGGGTGCAGAGAGTGCCCAACCTGAAGCAGAGGAG...TGAGTGGCTGCCCTGCAGAAGATGTGATGAATTATCCTGTAGTACAAGATTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR CAA 90 bp GGGGATCAAGTACAAGAGTCTCCACAGCTTGGACAAAGCACAAACAAACCTGTTTCCTCGGTGGTCTCCTaGGGCTCTGCACCTATAGTT +
Preference number: 5 (lower is better)
Translates to: GDQVQESPQLGQSTNKPVSSVVS*GSAPIV
Trigger: AACTATAGGTGCAGAGCCCAAGGAGACCACCGAGGA...AACAGGTTTGTTTGTGCTTTGTCCAAGCTGTGGAGACTCTTGTACTTGATCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS GCA 90 bp ATCTCGCTCAGAATAGTCAATGAGCCAAACACTGGGGCGTTTTCTTaGTCCTGGGAAGATCGTGTACAATCACGACTCACTGGGAGACAT +
Preference number: 5 (lower is better)
Translates to: ISLRIVNEPNTGAFS*SWEDRVQSRLTGRH
Trigger: ATGTCTCCCAGTGAGTCGTGATTGTACACGATCTTCCCAGGAGCAAGAAAACGCCCCAGTGTTTGGCTCATTGACTATTCTGAGCGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450124.1
CDS CCA 90 bp TTGGGCTCTGCACCTATAGTTATTTCGTTTTCTCCTTCCTCTTCATaGTTGGAGGCAGGCTCTATGACCACCGAAGGAATGACCTTCTCC +
Preference number: 5 (lower is better)
Translates to: LGSAPIVISFSPSSS*LEAGSMTTEGMTFS
Trigger: GGAGAAGGTCATTCCTTCGGTGGTCATAGAGCCTGCCTCCAACCATGAAGAGGAAGGAGAAAACGAAATAACTATAGGTGCAGAGCCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325590.9
ENST00000356264.7
ENST00000441628.5
ENST00000460887.1
ENST00000475581.5
CDS CCA 90 bp CTCAGAATAGTCAATGAGCCAAACACTGGGGCGTTTTCTTGCTCCTaGGAAGATCGTGTACAATCACGACTCACTGGGAGACATCAGTTC +
Preference number: 5 (lower is better)
Translates to: LRIVNEPNTGAFSCS*EDRVQSRLTGRHQF
Trigger: GAACTGATGTCTCCCAGTGAGTCGTGATTGTACACGATCTTCCCAGGAGCAAGAAAACGCCCCAGTGTTTGGCTCATTGACTATTCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450124.1
CDS CCA 90 bp CTAGCATTCCAGGAGGTCCCCAAAATCAATGGTCTTGCTATCTCCTaGCTTTGTTCCCAGCAGCTAGCAATGGCTTGTTCCCTACAATCA +
Preference number: 5 (lower is better)
Translates to: LAFQEVPKINGLAIS*LCSQQLAMACSLQS
Trigger: TGATTGTAGGGAACAAGCCATTGCTAGCTGCTGGGAACAAAGCCAGGAGATAGCAAGACCATTGATTTTGGGGACCTCCTGGAATGCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471913.5
CDS-3UTR CAA 90 bp AGTCTCCACAGCTTGGACAAAGCACAAACAAACCTGTTATTGACAACATGGGAACGCTTCTGGACGTTCTaGGCGAAGATGCCCGTCTTG +
Preference number: 5 (lower is better)
Translates to: SLHSLDKAQTNLLLTTWERFWTF*AKMPVL
Trigger: CAAGACGGGCATCTTCGCCAAGAACGTCCAGAAGCG...TTCCCATGTTGTCAATAACAGGTTTGTTTGTGCTTTGTCCAAGCTGTGGAGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR CAA 90 bp GTTTTAAACATAGTAAACCTGAAAGGGAGCGAGAGCACGTGCTCACACCTGGGCCTTTATGTCAGGAAATaGCCCCAGGTAGGTATCCAG +
Preference number: 5 (lower is better)
Translates to: VLNIVNLKGSESTCSHLGLYVRK*PQVGIQ
Trigger: CTGGATACCTACCTGGGGCAATTTCCTGACATAAAG...GCCCAGGTGTGAGCACGTGCTCTCGCTCCCTTTCAGGTTTACTATGTTTAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR CAA 90 bp ATTCATCACATCTTCTGCAGGGCAGCCACTCAATACGATACACCTGATGCAGAGGTGCTAATGTATGATTaGGACTTGCTGTCGGGCTCG +
Preference number: 5 (lower is better)
Translates to: IHHIFCRAATQYDTPDAEVLMYD*DLLSGS
Trigger: CGAGCCCGACAGCAAGTCCAAATCATACATTAGCAC...CTCTGCATCAGGTGTATCGTATTGAGTGGCTGCCCTGCAGAAGATGTGATGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR CAA 90 bp GTTTTAAACATAGTAAACCTGAAAGGGAGCGAGAGCACGTGCTCACACCTGGGCATGGGATGGCTGGTTTaGCCATTAGGCAAAACTGCA +
Preference number: 5 (lower is better)
Translates to: VLNIVNLKGSESTCSHLGMGWLV*PLGKTA
Trigger: TGCAGTTTTGCCTAATGGCAAAACCAGCCATCCCAT...GCCCAGGTGTGAGCACGTGCTCTCGCTCCCTTTCAGGTTTACTATGTTTAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR CAA 90 bp CTTGGACAAAGCACAAACAAACCTGTTATTGACAACATGGGAATGAGTGAGGATCGCTTCTGGACGTTCTaGGCGAAGATGCCCGTCTTG +
Preference number: 5 (lower is better)
Translates to: LGQSTNKPVIDNMGMSEDRFWTF*AKMPVL
Trigger: CAAGACGGGCATCTTCGCCAAGAACGTCCAGAAGCG...ATCCTCACTCATTCCCATGTTGTCAATAACAGGTTTGTTTGTGCTTTGTCCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR CAA 90 bp CCCATCCCAACTAGCCTACCTCCAGCCACAGCGGCTGGACAGCTAGATAAATCAAAAATCCAACTCGTCTaGACCATAATGATGGTAACT +
Preference number: 5 (lower is better)
Translates to: PIPTSLPPATAAGQLDKSKIQLV*TIMMVT
Trigger: AGTTACCATCATTATGGTCAAGACGAGTTGGATTTT...TGATTTATCTAGCTGTCCAGCCGCTGTGGCTGGAGGTAGGCTAGTTGGGATGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR CAA 90 bp TCTGATCTGGAGAAAGCTACTTTAGAATTGGTGGGAGGGGATCAAGTACAAGAGGGTGTCACCTCGGGCTaGAAAGGATCAAAGTCCAGA +
Preference number: 5 (lower is better)
Translates to: SDLEKATLELVGGDQVQEGVTSG*KGSKSR
Trigger: TCTGGACTTTGATCCTTTCAAGCCCGAGGTGACACC...CTCTTGTACTTGATCCCCTCCCACCAATTCTAAAGTAGCTTTCTCCAGATCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR CAA 90 bp TTGTACTACAGGATAATTCATCACATCTTCTGCAGGGCAGCCACTCAATACGATTCCTCGGTGGTCTCCTaGGGCTCTGCACCTATAGTT +
Preference number: 5 (lower is better)
Translates to: LYYRIIHHIFCRAATQYDSSVVS*GSAPIV
Trigger: AACTATAGGTGCAGAGCCCAAGGAGACCACCGAGGA...ATCGTATTGAGTGGCTGCCCTGCAGAAGATGTGATGAATTATCCTGTAGTACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR CAA 90 bp GTTTTAAACATAGTAAACCTGAAAGGGAGCGAGAGCACGTGCTCACACCTGGGCAAGAGTCTCCACAGCTaGGACAAAGCACAAACAAAC +
Preference number: 5 (lower is better)
Translates to: VLNIVNLKGSESTCSHLGKSLHS*DKAQTN
Trigger: GTTTGTTTGTGCTTTGTCCAAGCTGTGGAGACTCTT...GCCCAGGTGTGAGCACGTGCTCTCGCTCCCTTTCAGGTTTACTATGTTTAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR CAA 90 bp GAGCCAAACACTGGGGCGTTTTCTTGCTCCTGGGAAGATCGTGTACAATCACGAACTGTGATTTCCAAGTaGCAGATCATACTCTGGTCT +
Preference number: 5 (lower is better)
Translates to: EPNTGAFSCSWEDRVQSRTVISK*QIILWS
Trigger: AGACCAGAGTATGATCTGCAACTTGGAAATCACAGT...TCGTGATTGTACACGATCTTCCCAGGAGCAAGAAAACGCCCCAGTGTTTGGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450124.1
CDS TCA 90 bp GTACCTTCTAGTGTCTTGATATCAATAGCTCCAGTGTCTACCTTTTaGCACGCCTCCACACCTGCCCACAGAGAATCTTCCATCTTCTGT +
Preference number: 5 (lower is better)
Translates to: VPSSVLISIAPVSTF*HASTPAHRESSIFC
Trigger: ACAGAAGATGGAAGATTCTCTGTGGGCAGGTGTGGAGGCGTGTCAAAAGGTAGACACTGGAGCTATTGATATCAAGACACTAGAAGGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467580.5
ENST00000471913.5
CDS CCA 90 bp GGCGTTTTCTTGCTCCTGGGAAGATCGTGTACAATCACGACTCACTaGGAGACATCAGTTCACTGTGATTTCCAAGTTGCAGATCATACT +
Preference number: 5 (lower is better)
Translates to: GVFLLLGRSCTITTH*ETSVHCDFQVADHT
Trigger: AGTATGATCTGCAACTTGGAAATCACAGTGAACTGATGTCTCCCAGTGAGTCGTGATTGTACACGATCTTCCCAGGAGCAAGAAAACGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450124.1
CDS CCA 90 bp AGGGCTGCCATCTTCAATATTAGATACAGAGTAGGTCTGGAGAGATaGATTCAAGATATCTGGGTGATTGGCAGGTTTGGCTCCAAAGCC +
Preference number: 5 (lower is better)
Translates to: RAAIFNIRYRVGLER*IQDIWVIGRFGSKA
Trigger: GGCTTTGGAGCCAAACCTGCCAATCACCCAGATATCTTGAATCCATCTCTCCAGACCTACTCTGTATCTAATATTGAAGATGGCAGCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471913.5
CDS-3UTR CAA 90 bp GAGTCTCCACAGCTTGGACAAAGCACAAACAAACCTGTTATTGACAACATGGGACCCATCCACGAGTTTTaGATGGAAGTCTTCCCACAG +
Preference number: 5 (lower is better)
Translates to: ESPQLGQSTNKPVIDNMGPIHEF*MEVFPQ
Trigger: CTGTGGGAAGACTTCCATCAAAAACTCGTGGATGGG...TCCCATGTTGTCAATAACAGGTTTGTTTGTGCTTTGTCCAAGCTGTGGAGACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR CAA 90 bp CTTGGACAAAGCACAAACAAACCTGTTATTGACAACATGGGAATGAGTGAGGATATGTATGATTTGGACTaGCTGTCGGGCTCGGGAGGG +
Preference number: 5 (lower is better)
Translates to: LGQSTNKPVIDNMGMSEDMYDLD*LSGSGG
Trigger: CCCTCCCGAGCCCGACAGCAAGTCCAAATCATACAT...ATCCTCACTCATTCCCATGTTGTCAATAACAGGTTTGTTTGTGCTTTGTCCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR CAA 90 bp CTTGGACAAAGCACAAACAAACCTGTTATTGACAACATGGGAATGAGTGAGGATTCTCCTGAGGCACTGTaGCTTCGAGCTCCTCTGCTT +
Preference number: 5 (lower is better)
Translates to: LGQSTNKPVIDNMGMSEDSPEAL*LRAPLL
Trigger: AAGCAGAGGAGCTCGAAGCAACAGTGCCTCAGGAGA...ATCCTCACTCATTCCCATGTTGTCAATAACAGGTTTGTTTGTGCTTTGTCCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS TCA 90 bp TCTCTTCCTCTTCATCTGACTTCTTCATATCTTCATGACTTTCTTTaGACAGGCCAGCTGTGTCCATGGCTGGCATGTCTGAGTCAAGTG +
Preference number: 5 (lower is better)
Translates to: SLPLHLTSSYLHDFL*TGQLCPWLACLSQV
Trigger: CACTTGACTCAGACATGCCAGCCATGGACACAGCTGGCCTGTTCAAAGAAAGTCATGAAGATATGAAGAAGTCAGATGAAGAGGAAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000441628.5
ENST00000450124.1
ENST00000467580.5
ENST00000471913.5
CDS GCA 90 bp TGGCTGCCAGATTTGACCTGGATCTGTTCCCCAAGAGTCTATCTCTaGAATTCTTGGCAAGTTAACAGTATGACTACGGTTCTCAGTTAC +
Preference number: 5 (lower is better)
Translates to: WLPDLTWICSPRVYL*NSWQVNSMTTVLSY
Trigger: GTAACTGAGAACCGTAGTCATACTGTTAACTTGCCAAGAATTGCAGAGATAGACTCTTGGGGAACAGATCCAGGTCAAATCTGGCAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471913.5
CDS-3UTR CAA 90 bp GAGTCTCCACAGCTTGGACAAAGCACAAACAAACCTGTTATTGACAACATGGGAGCCTCCTGCATGCCTTaGATTGCTGCTAAATATCCT +
Preference number: 5 (lower is better)
Translates to: ESPQLGQSTNKPVIDNMGASCMP*IAAKYP
Trigger: AGGATATTTAGCAGCAATCAAAGGCATGCAGGAGGC...TCCCATGTTGTCAATAACAGGTTTGTTTGTGCTTTGTCCAAGCTGTGGAGACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR CAA 90 bp TCTGATCTGGAGAAAGCTACTTTAGAATTGGTGGGAGGGGATCAAGTACAAGAGGCCTCCTGCATGCCTTaGATTGCTGCTAAATATCCT +
Preference number: 5 (lower is better)
Translates to: SDLEKATLELVGGDQVQEASCMP*IAAKYP
Trigger: AGGATATTTAGCAGCAATCAAAGGCATGCAGGAGGC...CTCTTGTACTTGATCCCCTCCCACCAATTCTAAAGTAGCTTTCTCCAGATCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR CAA 90 bp GGGGATCAAGTACAAGAGTCTCCACAGCTTGGACAAAGCACAAACAAACCTGTTCCAGGTATGATCAAGTaGCAGATCATACTCTGGTCT +
Preference number: 5 (lower is better)
Translates to: GDQVQESPQLGQSTNKPVPGMIK*QIILWS
Trigger: AGACCAGAGTATGATCTGCAACTTGATCATACCTGG...AACAGGTTTGTTTGTGCTTTGTCCAAGCTGTGGAGACTCTTGTACTTGATCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325590.9
CDS-3UTR CAA 90 bp GGGGATCAAGTACAAGAGTCTCCACAGCTTGGACAAAGCACAAACAAACCTGTTTGCACACATGCTCCATaGATACATCTTCCCAAGGTT +
Preference number: 5 (lower is better)
Translates to: GDQVQESPQLGQSTNKPVCTHAP*IHLPKV
Trigger: AACCTTGGGAAGATGTATCAATGGAGCATGTGTGCA...AACAGGTTTGTTTGTGCTTTGTCCAAGCTGTGGAGACTCTTGTACTTGATCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR CAA 90 bp GAAAGCTACTTTAGAATTGGTGGGAGGGGATCAAGTACAAGAGTCTCCACAGCTATACTGTTGACTCTTTaGCCAATGGGATGGCTGGTT +
Preference number: 5 (lower is better)
Translates to: ESYFRIGGRGSSTRVSTAILLTL*PMGWLV
Trigger: AACCAGCCATCCCATTGGCAAAAGAGTCAACAGTAT...AGCTGTGGAGACTCTTGTACTTGATCCCCTCCCACCAATTCTAAAGTAGCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS GCA 90 bp GCCTGTTCAGATTCAGCCAAGTTGCAGATCATACTCTGGTCTGTCTaGATTGTGAATAATGAAGTATCCTGGGGCTGTGTGAATCCATTA +
Preference number: 5 (lower is better)
Translates to: ACSDSAKLQIILWSV*IVNNEVSWGCVNPL
Trigger: TAATGGATTCACACAGCCCCAGGATACTTCATTATTCACAATGCAGACAGACCAGAGTATGATCTGCAACTTGGCTGAATCTGAACAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356264.7
ENST00000462072.1
CDS CCA 90 bp TGTGTCCAGCTATTATCTAAGCCTTCTGTATCTCTGATAGGCCAGTaGTTAATAGAATCCAGACAACTGGCAAATCCACTTGCTTGGCCA +
Preference number: 5 (lower is better)
Translates to: CVQLLSKPSVSLIGQ*LIESRQLANPLAWP
Trigger: TGGCCAAGCAAGTGGATTTGCCAGTTGTCTGGATTCTATTAACCACTGGCCTATCAGAGATACAGAAGGCTTAGATAATAGCTGGACACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471913.5
CDS CCA 90 bp TGGTTAGCAATTTCATCTTCAGATAAATCTGAGTTGTTGATGTCCTaGTCTCGGGAACTAGCAGAACTCTCAGTGCTAGCATTCCAGGAG +
Preference number: 5 (lower is better)
Translates to: WLAISSSDKSELLMS*SRELAELSVLAFQE
Trigger: CTCCTGGAATGCTAGCACTGAGAGTTCTGCTAGTTCCCGAGACCAGGACATCAACAACTCAGATTTATCTGAAGATGAAATTGCTAACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471913.5
CDS-3UTR CAA 90 bp GATAATCTTGTACTACAGGATAATTCATCACATCTTCTGCAGGGCAGCCACTCACTTTATGTCAGGAAATaGCCCCAGGTAGGTATCCAG +
Preference number: 5 (lower is better)
Translates to: DNLVLQDNSSHLLQGSHSLYVRK*PQVGIQ
Trigger: CTGGATACCTACCTGGGGCAATTTCCTGACATAAAG...TGAGTGGCTGCCCTGCAGAAGATGTGATGAATTATCCTGTAGTACAAGATTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR CAA 90 bp GACAGAATAAGAGCAATGCATGTATCAATGACAATTGAGAGGCAAAGAGCTACAGGTGTCACCTCGGGCTaGAAAGGATCAAAGTCCAGA +
Preference number: 5 (lower is better)
Translates to: DRIRAMHVSMTIERQRATGVTSG*KGSKSR
Trigger: TCTGGACTTTGATCCTTTCAAGCCCGAGGTGACACC...TGTAGCTCTTTGCCTCTCAATTGTCATTGATACATGCATTGCTCTTATTCTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR CAA 90 bp GAGTCTCCACAGCTTGGACAAAGCACAAACAAACCTGTTATTGACAACATGGGAATACTGTTGACTCTTTaGCCAATGGGATGGCTGGTT +
Preference number: 5 (lower is better)
Translates to: ESPQLGQSTNKPVIDNMGILLTL*PMGWLV
Trigger: AACCAGCCATCCCATTGGCAAAAGAGTCAACAGTAT...TCCCATGTTGTCAATAACAGGTTTGTTTGTGCTTTGTCCAAGCTGTGGAGACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR CAA 90 bp TGCATACACATAGATCCAGGAGTCATGGGAACTAGCTTGCGTGACTGTGTGTCCTTTTATAGTGTTCTTTaGGGGGTAGATGAATATGCC +
Preference number: 5 (lower is better)
Translates to: CIHIDPGVMGTSLRDCVSFYSVL*GVDEYA
Trigger: GGCATATTCATCTACCCCCAAAAGAACACTATAAAA...GGACACACAGTCACGCAAGCTAGTTCCCATGACTCCTGGATCTATGTGTATGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS TCA 90 bp ATCTTCTGTTTCTCTTCCTCTTCATCTGACTTCTTCATATCTTCATaGCTTTCTTTGAACAGGCCAGCTGTGTCCATGGCTGGCATGTCT +
Preference number: 5 (lower is better)
Translates to: IFCFSSSSSDFFISS*LSLNRPAVSMAGMS
Trigger: AGACATGCCAGCCATGGACACAGCTGGCCTGTTCAAAGAAAGTCATGAAGATATGAAGAAGTCAGATGAAGAGGAAGAGAAACAGAAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000441628.5
ENST00000450124.1
ENST00000467580.5
ENST00000471913.5
CDS GCA 90 bp TCAGCTCCAGGTATGATCAAGTTGCAGATCATACTCTGGTCTGTCTaGATTGTGAATAATGAAGTATCCTGGGGCTGTGTGAATCCATTA +
Preference number: 5 (lower is better)
Translates to: SAPGMIKLQIILWSV*IVNNEVSWGCVNPL
Trigger: TAATGGATTCACACAGCCCCAGGATACTTCATTATTCACAATGCAGACAGACCAGAGTATGATCTGCAACTTGATCATACCTGGAGCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325590.9
ENST00000441628.5
ENST00000467580.5
ENST00000471913.5
CDS-3UTR CAA 90 bp CTTGGACAAAGCACAAACAAACCTGTTATTGACAACATGGGAATGAGTGAGGATCGAACTGTTCGTCTTTaGTCTCATCAGCTTTCCCCA +
Preference number: 5 (lower is better)
Translates to: LGQSTNKPVIDNMGMSEDRTVRL*SHQLSP
Trigger: TGGGGAAAGCTGATGAGACAAAAGACGAACAGTTCG...ATCCTCACTCATTCCCATGTTGTCAATAACAGGTTTGTTTGTGCTTTGTCCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR CAA 90 bp GATAATCTTGTACTACAGGATAATTCATCACATCTTCTGCAGGGCAGCCACTCATGCACACATGCTCCATaGATACATCTTCCCAAGGTT +
Preference number: 5 (lower is better)
Translates to: DNLVLQDNSSHLLQGSHSCTHAP*IHLPKV
Trigger: AACCTTGGGAAGATGTATCAATGGAGCATGTGTGCA...TGAGTGGCTGCCCTGCAGAAGATGTGATGAATTATCCTGTAGTACAAGATTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR CAA 90 bp GAGTCTCCACAGCTTGGACAAAGCACAAACAAACCTGTTATTGACAACATGGGAAAAGCTACTTTAGAATaGGTGGGAGGGGATCAAGTA +
Preference number: 5 (lower is better)
Translates to: ESPQLGQSTNKPVIDNMGKATLE*VGGDQV
Trigger: TACTTGATCCCCTCCCACCAATTCTAAAGTAGCTTT...TCCCATGTTGTCAATAACAGGTTTGTTTGTGCTTTGTCCAAGCTGTGGAGACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR CAA 90 bp GACAGAATAAGAGCAATGCATGTATCAATGACAATTGAGAGGCAAAGAGCTACAGTCATGGGAACTAGCTaGCGTGACTGTGTGTCCATA +
Preference number: 5 (lower is better)
Translates to: DRIRAMHVSMTIERQRATVMGTS*RDCVSI
Trigger: TATGGACACACAGTCACGCAAGCTAGTTCCCATGAC...TGTAGCTCTTTGCCTCTCAATTGTCATTGATACATGCATTGCTCTTATTCTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS TCA 90 bp TGCCCACAGAGAATCTTCCATCTTCTGTTTCTCTTCCTCTTCATCTaGCTTCTTCATATCTTCATGACTTTCTTTGAACAGGCCAGCTGT +
Preference number: 5 (lower is better)
Translates to: CPQRIFHLLFLFLFI*LLHIFMTFFEQASC
Trigger: ACAGCTGGCCTGTTCAAAGAAAGTCATGAAGATATGAAGAAGTCAGATGAAGAGGAAGAGAAACAGAAGATGGAAGATTCTCTGTGGGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000441628.5
ENST00000450124.1
ENST00000467580.5
ENST00000471913.5
CDS GCA 90 bp CAGTTCACTGTGATTTCCAAGTTGCAGATCATACTCTGGTCTGTCTaGATTGTGAATAATGAAGTATCCTGGGGCTGTGTGAATCCATTA +
Preference number: 5 (lower is better)
Translates to: QFTVISKLQIILWSV*IVNNEVSWGCVNPL
Trigger: TAATGGATTCACACAGCCCCAGGATACTTCATTATTCACAATGCAGACAGACCAGAGTATGATCTGCAACTTGGAAATCACAGTGAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450124.1
CDS GCA 90 bp GATAGGCCAGTGGTTAATAGAATCCAGACAACTGGCAAATCCACTTaGTTGGCCATCTGGTATACCAGAGAATCCTGTTATATCCAAATT +
Preference number: 5 (lower is better)
Translates to: DRPVVNRIQTTGKST*LAIWYTRESCYIQI
Trigger: AATTTGGATATAACAGGATTCTCTGGTATACCAGATGGCCAAGCAAGTGGATTTGCCAGTTGTCTGGATTCTATTAACCACTGGCCTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471913.5
CDS CCA 90 bp GGCCAGTGGTTAATAGAATCCAGACAACTGGCAAATCCACTTGCTTaGCCATCTGGTATACCAGAGAATCCTGTTATATCCAAATTATTC +
Preference number: 5 (lower is better)
Translates to: GQWLIESRQLANPLA*PSGIPENPVISKLF
Trigger: GAATAATTTGGATATAACAGGATTCTCTGGTATACCAGATGGCCAAGCAAGTGGATTTGCCAGTTGTCTGGATTCTATTAACCACTGGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471913.5
CDS-3UTR CAA 90 bp GACAGAATAAGAGCAATGCATGTATCAATGACAATTGAGAGGCAAAGAGCTACACGAACTGTTCGTCTTTaGTCTCATCAGCTTTCCCCA +
Preference number: 5 (lower is better)
Translates to: DRIRAMHVSMTIERQRATRTVRL*SHQLSP
Trigger: TGGGGAAAGCTGATGAGACAAAAGACGAACAGTTCG...TGTAGCTCTTTGCCTCTCAATTGTCATTGATACATGCATTGCTCTTATTCTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR CAA 90 bp GAGTCTCCACAGCTTGGACAAAGCACAAACAAACCTGTTATTGACAACATGGGAGTTTCAGTTCCAATTTaGGCCTCCTCTAAACTTACT +
Preference number: 5 (lower is better)
Translates to: ESPQLGQSTNKPVIDNMGVSVPI*ASSKLT
Trigger: AGTAAGTTTAGAGGAGGCCAAAATTGGAACTGAAAC...TCCCATGTTGTCAATAACAGGTTTGTTTGTGCTTTGTCCAAGCTGTGGAGACTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR CAA 90 bp CTTGGACAAAGCACAAACAAACCTGTTATTGACAACATGGGAATGAGTGAGGATAAGAGTCTCCACAGCTaGGACAAAGCACAAACAAAC +
Preference number: 5 (lower is better)
Translates to: LGQSTNKPVIDNMGMSEDKSLHS*DKAQTN
Trigger: GTTTGTTTGTGCTTTGTCCAAGCTGTGGAGACTCTT...ATCCTCACTCATTCCCATGTTGTCAATAACAGGTTTGTTTGTGCTTTGTCCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR CAA 90 bp AGTCTCCACAGCTTGGACAAAGCACAAACAAACCTGTTATTGACAACATGGGAAAAAGCTACTTTAGAATaGGTGGGAGGGGATCAAGTA +
Preference number: 5 (lower is better)
Translates to: SLHSLDKAQTNLLLTTWEKATLE*VGGDQV
Trigger: TACTTGATCCCCTCCCACCAATTCTAAAGTAGCTTT...TTCCCATGTTGTCAATAACAGGTTTGTTTGTGCTTTGTCCAAGCTGTGGAGACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR CAA 90 bp GAAAGCTACTTTAGAATTGGTGGGAGGGGATCAAGTACAAGAGTCTCCACAGCTTTTTATAGTGTTCTTTaGGGGGTAGATGAATATGCC +
Preference number: 5 (lower is better)
Translates to: ESYFRIGGRGSSTRVSTAFYSVL*GVDEYA
Trigger: GGCATATTCATCTACCCCCAAAAGAACACTATAAAA...AGCTGTGGAGACTCTTGTACTTGATCCCCTCCCACCAATTCTAAAGTAGCTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS TCA 90 bp GATTGGCAGGTTTGGCTCCAAAGCCTTCTATCATTCCACAATTATTaGTTACCTTTTGAATTCCATCATGTAGACCTTGGTCTCTGTCAC +
Preference number: 5 (lower is better)
Translates to: DWQVWLQSLLSFHNY*LPFEFHHVDLGLCH
Trigger: GTGACAGAGACCAAGGTCTACATGATGGAATTCAAAAGGTAATCAATAATTGTGGAATGATAGAAGGCTTTGGAGCCAAACCTGCCAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471913.5
CDS TCA 90 bp GTTCCCCAAGAGTCTATCTCTGCAATTCTTGGCAAGTTAACAGTATaGCTACGGTTCTCAGTTACTGTTCTTTCAGACCCTTCTATTAGT +
Preference number: 5 (lower is better)
Translates to: VPQESISAILGKLTV*LRFSVTVLSDPSIS
Trigger: ACTAATAGAAGGGTCTGAAAGAACAGTAACTGAGAACCGTAGTCATACTGTTAACTTGCCAAGAATTGCAGAGATAGACTCTTGGGGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471913.5
CDS CCA 90 bp ATGAACCACCAGAAGCCGGCTGTACCAAATCAGTGCTTGTCTGTATaGGTAAAGAAAATAGTAACAATAAGGCGAGAGAGAAAATTCACT +
Preference number: 5 (lower is better)
Translates to: MNHQKPAVPNQCLSV*VKKIVTIRRERKFT
Trigger: AGTGAATTTTCTCTCTCGCCTTATTGTTACTATTTTCTTTACCCATACAGACAAGCACTGATTTGGTACAGCCGGCTTCTGGTGGTTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462072.1
CDS-3UTR CAA 90 bp GACAGAATAAGAGCAATGCATGTATCAATGACAATTGAGAGGCAAAGAGCTACATCAGATTCAGCCAAGTaGCAGATCATACTCTGGTCT +
Preference number: 5 (lower is better)
Translates to: DRIRAMHVSMTIERQRATSDSAK*QIILWS
Trigger: AGACCAGAGTATGATCTGCAACTTGGCTGAATCTGA...TGTAGCTCTTTGCCTCTCAATTGTCATTGATACATGCATTGCTCTTATTCTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356264.7
CDS-3UTR CAA 90 bp CTTGGACAAAGCACAAACAAACCTGTTATTGACAACATGGGAATGAGTGAGGATGTTTCAGTTCCAATTTaGGCCTCCTCTAAACTTACT +
Preference number: 5 (lower is better)
Translates to: LGQSTNKPVIDNMGMSEDVSVPI*ASSKLT
Trigger: AGTAAGTTTAGAGGAGGCCAAAATTGGAACTGAAAC...ATCCTCACTCATTCCCATGTTGTCAATAACAGGTTTGTTTGTGCTTTGTCCAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS-3UTR CAA 90 bp TTGTACTACAGGATAATTCATCACATCTTCTGCAGGGCAGCCACTCAATACGATTGTTGGAAAAGAACATaGAGAACTTTTGCAGCAGTT +
Preference number: 5 (lower is better)
Translates to: LYYRIIHHIFCRAATQYDCWKRT*RTFAAV
Trigger: AACTGCTGCAAAAGTTCTCAATGTTCTTTTCCAACA...ATCGTATTGAGTGGCTGCCCTGCAGAAGATGTGATGAATTATCCTGTAGTACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS CCA 90 bp CACAGTCTCACACTGAATTTCTTCAGCATCTGTACTGTCTTGTGCTaGGTAAAATATCATATCATGGTTGGGAGTGTCTATTGCATTTTT +
Preference number: 5 (lower is better)
Translates to: HSLTLNFFSICTVLC*VKYHIMVGSVYCIF
Trigger: AAAAATGCAATAGACACTCCCAACCATGATATGATATTTTACCCAGCACAAGACAGTACAGATGCTGAAGAAATTCAGTGTGAGACTGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471913.5
CDS CCA 90 bp TTAAATGAACCACCAGAAGCCTCGTCTTTGTCAGCCTCTATTTCTTaGTACAACAATCCATATCTCTGGTTAGCAATTTCATCTTCAGAT +
Preference number: 5 (lower is better)
Translates to: LNEPPEASSLSASIS*YNNPYLWLAISSSD
Trigger: ATCTGAAGATGAAATTGCTAACCAGAGATATGGATTGTTGTACCAAGAAATAGAGGCTGACAAAGACGAGGCTTCTGGTGGTTCATTTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471913.5
CDS-3UTR CAA 90 bp CTTGGACAAAGCACAAACAAACCTGTTATTGACAACATGGGAATGAGTGAGGATAAAATCCAACTCGTCTaGACCATAATGATGGTAACT +
Preference number: 5 (lower is better)
Translates to: LGQSTNKPVIDNMGMSEDKIQLV*TIMMVT
Trigger: AGTTACCATCATTATGGTCAAGACGAGTTGGATTTT...ATCCTCACTCATTCCCATGTTGTCAATAACAGGTTTGTTTGTGCTTTGTCCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS GCA 72 bp GTCTTGATGTCGGCCATGGCTGCGGGTCCGGGGAGCTaGGAAGAGCAGAGCGCGCAGCGGGGCTGGCGGCGG +
Preference number: 6 (lower is better)
Translates to: VLMSAMAAGPGS*EEQSAQRGWRR
Trigger: CCGCCGCCAGCCCCGCTGCGCGCTCTGCTCTTCGCAGCTCCCCGGACCCGCAGCCATGGCCGACATCAAGAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325590.9
CDS TCA 72 bp GTCGCTTCTGGACGTTCTTGGCGAAGATGCCCGTCTTaGTGTCGGCCATGGCTGCGGGTCCGGGGAGCTGCG +
Preference number: 6 (lower is better)
Translates to: VASGRSWRRCPS*CRPWLRVRGAA
Trigger: CGCAGCTCCCCGGACCCGCAGCCATGGCCGACATCAAGACGGGCATCTTCGCCAAGAACGTCCAGAAGCGAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325590.9
CDS CAA 90 bp GCGCGGTTGAGTCGCTTCTGGACGTTCTTGGCGAAGATGCCCGTCTaGATGTCGGCCATGGCTGCGGGTCCGGGGAGCTGCGAAGAGCAG +
Preference number: 6 (lower is better)
Translates to: ARLSRFWTFLAKMPV*MSAMAAGPGSCEEQ
Trigger: CTGCTCTTCGCAGCTCCCCGGACCCGCAGCCATGGCCGACATCAAGACGGGCATCTTCGCCAAGAACGTCCAGAAGCGACTCAACCGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325590.9
CDS CAA 72 bp AGTCGCTTCTGGACGTTCTTGGCGAAGATGCCCGTCTaGATGTCGGCCATGGCTGCGGGTCCGGGGAGCTGC +
Preference number: 6 (lower is better)
Translates to: SRFWTFLAKMPV*MSAMAAGPGSC
Trigger: GCAGCTCCCCGGACCCGCAGCCATGGCCGACATCAAGACGGGCATCTTCGCCAAGAACGTCCAGAAGCGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS CAA 90 bp ACCGAGGCCGTGCTGGTGCGGGAGACGCAGGTGCTAATGTATGATTaGGACTTGCTGTCGGGCTCGGGAGGGGTGAAGGCTCCTCAGGCG +
Preference number: 6 (lower is better)
Translates to: TEAVLVRETQVLMYD*DLLSGSGGVKAPQA
Trigger: CGCCTGAGGAGCCTTCACCCCTCCCGAGCCCGACAGCAAGTCCAAATCATACATTAGCACCTGCGTCTCCCGCACCAGCACGGCCTCGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325590.9
ENST00000356264.7
ENST00000441628.5
CDS CAA 90 bp GCCGTGCTGGTGCGGGAGACGCAGGTGCTAATGTATGATTTGGACTaGCTGTCGGGCTCGGGAGGGGTGAAGGCTCCTCAGGCGGTGATG +
Preference number: 6 (lower is better)
Translates to: AVLVRETQVLMYDLD*LSGSGGVKAPQAVM
Trigger: CATCACCGCCTGAGGAGCCTTCACCCCTCCCGAGCCCGACAGCAAGTCCAAATCATACATTAGCACCTGCGTCTCCCGCACCAGCACGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325590.9
ENST00000356264.7
ENST00000441628.5
CDS CAA 90 bp TCTCCACACAAGCAGCAATGGCAACTCCAGCCTCCGGCGCAGGCTTaGGGGGCAGTTGTTCATTTCCACCTGGAAAGGCTGGCCCCGGGG +
Preference number: 6 (lower is better)
Translates to: SPHKQQWQLQPPAQA*GAVVHFHLERLAPG
Trigger: CCCCGGGGCCAGCCTTTCCAGGTGGAAATGAACAACTGCCCCCAAAGCCTGCGCCGGAGGCTGGAGTTGCCATTGCTGCTTGTGTGGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441628.5
CDS TCA 72 bp GGCCGTGCTGGTGCGGGAGACGCAGGTGCTAATGTATaGTTTGGACTTGCTGTCGGGCTCGGGAGGGGTGAA +
Preference number: 6 (lower is better)
Translates to: GRAGAGDAGANV*FGLAVGLGRGE
Trigger: TTCACCCCTCCCGAGCCCGACAGCAAGTCCAAATCATACATTAGCACCTGCGTCTCCCGCACCAGCACGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325590.9
ENST00000356264.7
ENST00000441628.5
CDS CCA 72 bp GGTCATACAGCTGCTCCATCTCCACACAAGCAGCAATaGCAACTCCAGCCTCCGGCGCAGGCTTTGGGGGCA +
Preference number: 6 (lower is better)
Translates to: GHTAAPSPHKQQ*QLQPPAQALGA
Trigger: TGCCCCCAAAGCCTGCGCCGGAGGCTGGAGTTGCCATTGCTGCTTGTGTGGAGATGGAGCAGCTGTATGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000441628.5
ENST00000450124.1
ENST00000467580.5
ENST00000471913.5
CDS CCA 72 bp AGCAGCAATGGCAACTCCAGCCTCCGGCGCAGGCTTTaGGGGCAGTTGTTCATTTCCACCTGGAAAGGCTGG +
Preference number: 6 (lower is better)
Translates to: SSNGNSSLRRRL*GQLFISTWKGW
Trigger: CCAGCCTTTCCAGGTGGAAATGAACAACTGCCCCCAAAGCCTGCGCCGGAGGCTGGAGTTGCCATTGCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441628.5
CDS CAA 72 bp GTGCGGGAGACGCAGGTGCTAATGTATGATTTGGACTaGCTGTCGGGCTCGGGAGGGGTGAAGGCTCCTCAG +
Preference number: 6 (lower is better)
Translates to: VRETQVLMYDLD*LSGSGGVKAPQ
Trigger: CTGAGGAGCCTTCACCCCTCCCGAGCCCGACAGCAAGTCCAAATCATACATTAGCACCTGCGTCTCCCGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325590.9
ENST00000356264.7
ENST00000441628.5
CDS CAA 72 bp GTGCTGGTGCGGGAGACGCAGGTGCTAATGTATGATTaGGACTTGCTGTCGGGCTCGGGAGGGGTGAAGGCT +
Preference number: 6 (lower is better)
Translates to: VLVRETQVLMYD*DLLSGSGGVKA
Trigger: AGCCTTCACCCCTCCCGAGCCCGACAGCAAGTCCAAATCATACATTAGCACCTGCGTCTCCCGCACCAGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325590.9
ENST00000356264.7
ENST00000441628.5
CDS CAA 72 bp GTGGGGCCCGGAGGAGCCGCGTCCTCGGTGGTCTCCTaGGGCTCTGCACCTATAGTTATTTCGTTTTCTCCT +
Preference number: 6 (lower is better)
Translates to: VGPGGAASSVVS*GSAPIVISFSP
Trigger: AGGAGAAAACGAAATAACTATAGGTGCAGAGCCCAAGGAGACCACCGAGGACGCGGCTCCTCCGGGCCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325590.9
ENST00000356264.7
ENST00000441628.5
ENST00000460887.1
ENST00000475581.5
CDS CAA 90 bp GTCTCGCTGGTGGGGCCCGGAGGAGCCGCGTCCTCGGTGGTCTCCTaGGGCTCTGCACCTATAGTTATTTCGTTTTCTCCTTCCTCTTCA +
Preference number: 6 (lower is better)
Translates to: VSLVGPGGAASSVVS*GSAPIVISFSPSSS
Trigger: TGAAGAGGAAGGAGAAAACGAAATAACTATAGGTGCAGAGCCCAAGGAGACCACCGAGGACGCGGCTCCTCCGGGCCCCACCAGCGAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325590.9
ENST00000356264.7
ENST00000441628.5
ENST00000460887.1
CDS GCA 72 bp TGTTCATTTCCACCTGGAAAGGCTGGCCCCGGGGCATaGTCACTCTCTTCAGCTACAGTGGGCCAGTCAGCA +
Preference number: 6 (lower is better)
Translates to: CSFPPGKAGPGA*SLSSATVGQSA
Trigger: TGCTGACTGGCCCACTGTAGCTGAAGAGAGTGAGCATGCCCCGGGGCCAGCCTTTCCAGGTGGAAATGAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441628.5
CDS CAA 72 bp AAGCAGCAATGGCAACTCCAGCCTCCGGCGCAGGCTTaGGGGGCAGTTGTTCATTTCCACCTGGAAAGGCTG +
Preference number: 6 (lower is better)
Translates to: KQQWQLQPPAQA*GAVVHFHLERL
Trigger: CAGCCTTTCCAGGTGGAAATGAACAACTGCCCCCAAAGCCTGCGCCGGAGGCTGGAGTTGCCATTGCTGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441628.5
CDS CCA 72 bp GCAGAGTCTTCTCCAAACCCACCTGAGGTAACTTCTTaGCTGACCCTGTCTGTACTAGCGTCAGGGCCCCAA +
Preference number: 6 (lower is better)
Translates to: AESSPNPPEVTS*LTLSVLASGPQ
Trigger: TTGGGGCCCTGACGCTAGTACAGACAGGGTCAGCCAAGAAGTTACCTCAGGTGGGTTTGGAGAAGACTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441628.5
CDS CAA 90 bp GGTGAGTGGGTCACTCCAGCAGAACCTGCAGGTGTCACCTCGGGCTaGAAAGGATCAAAGTCCAGATCCAGCAAAGTCTCCTCTTTCTTC +
Preference number: 6 (lower is better)
Translates to: GEWVTPAEPAGVTSG*KGSKSRSSKVSSFF
Trigger: GAAGAAAGAGGAGACTTTGCTGGATCTGGACTTTGATCCTTTCAAGCCCGAGGTGACACCTGCAGGTTCTGCTGGAGTGACCCACTCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325590.9
ENST00000356264.7
ENST00000441628.5
CDS GCA 72 bp ATGGCTGGCATGTCTGAGTCAAGTGGGTCATACAGCTaGTCCATCTCCACACAAGCAGCAATGGCAACTCCA +
Preference number: 6 (lower is better)
Translates to: MAGMSESSGSYS*SISTQAAMATP
Trigger: TGGAGTTGCCATTGCTGCTTGTGTGGAGATGGAGCAGCTGTATGACCCACTTGACTCAGACATGCCAGCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000441628.5
ENST00000450124.1
ENST00000467580.5
ENST00000471913.5
CDS GCA 72 bp GACTTTCTGAAGAGTCAGTCGGCTGTACCAAATCAGTaGTTGTCGTCCATAGGTCCCAGGGCAATGTCTGAG +
Preference number: 6 (lower is better)
Translates to: DFLKSQSAVPNQ*LSSIGPRAMSE
Trigger: CTCAGACATTGCCCTGGGACCTATGGACGACAAGCACTGATTTGGTACAGCCGACTGACTCTTCAGAAAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441628.5
CDS CCA 72 bp CAGGAGGTCCCCAAAATCAATGGTCTTGCTATCTCCTaGCTTTGTTCCCAGCAGCTAGCAATGGCTTGTTCC +
Preference number: 6 (lower is better)
Translates to: QEVPKINGLAIS*LCSQQLAMACS
Trigger: GGAACAAGCCATTGCTAGCTGCTGGGAACAAAGCCAGGAGATAGCAAGACCATTGATTTTGGGGACCTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471913.5
CDS CCA 72 bp CTCAGTGCTAGCATTCCAGGAGGTCCCCAAAATCAATaGTCTTGCTATCTCCTGGCTTTGTTCCCAGCAGCT +
Preference number: 6 (lower is better)
Translates to: LSASIPGGPQNQ*SCYLLALFPAA
Trigger: AGCTGCTGGGAACAAAGCCAGGAGATAGCAAGACCATTGATTTTGGGGACCTCCTGGAATGCTAGCACTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471913.5
CDS CAA 90 bp ATTCCAGGAGGTCCCCAAAATCAATGGTCTTGCTATCTCCTGGCTTaGTTCCCAGCAGCTAGCAATGGCTTGTTCCCTACAATCACCTGC +
Preference number: 6 (lower is better)
Translates to: IPGGPQNQWSCYLLA*FPAASNGLFPTITC
Trigger: GCAGGTGATTGTAGGGAACAAGCCATTGCTAGCTGCTGGGAACAAAGCCAGGAGATAGCAAGACCATTGATTTTGGGGACCTCCTGGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471913.5
CDS GCA 72 bp GCAGACGAAAGCAGGCTGGTGGATAATCTTATGTCTTaGTCTGTTTCGGAGGGACATGCAGAGTCTTCTCCA +
Preference number: 6 (lower is better)
Translates to: ADESRLVDNLMS*SVSEGHAESSP
Trigger: TGGAGAAGACTCTGCATGTCCCTCCGAAACAGAGCAAGACATAAGATTATCCACCAGCCTGCTTTCGTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441628.5
CDS CAA 72 bp TTTCTGAAGAGTCAGTCGGCTGTACCAAATCAGTGCTaGTCGTCCATAGGTCCCAGGGCAATGTCTGAGACA +
Preference number: 6 (lower is better)
Translates to: FLKSQSAVPNQC*SSIGPRAMSET
Trigger: TGTCTCAGACATTGCCCTGGGACCTATGGACGACAAGCACTGATTTGGTACAGCCGACTGACTCTTCAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441628.5
CDS CAA 72 bp GGTCCCCAAAATCAATGGTCTTGCTATCTCCTGGCTTaGTTCCCAGCAGCTAGCAATGGCTTGTTCCCTACA +
Preference number: 6 (lower is better)
Translates to: GPQNQWSCYLLA*FPAASNGLFPT
Trigger: TGTAGGGAACAAGCCATTGCTAGCTGCTGGGAACAAAGCCAGGAGATAGCAAGACCATTGATTTTGGGGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471913.5
CDS TCA 72 bp TCTTGCAGTACTTGTTGCCCTAATCTAAGCGTCGGGTaGAGTTCTCTGGAAAGAGGCCTTTGTAGGTGGCAA +
Preference number: 6 (lower is better)
Translates to: SCSTCCPNLSVG*SSLERGLCRWQ
Trigger: TTGCCACCTACAAAGGCCTCTTTCCAGAGAACTTCACCCGACGCTTAGATTAGGGCAACAAGTACTGCAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325590.9
ENST00000356264.7
CDS CCA 72 bp TTGCTCCTGGGAAGATCGTGTACAATCACGACTCACTaGGAGACATCAGTTCACTGTGATTTCCAAGTTGCA +
Preference number: 6 (lower is better)
Translates to: LLLGRSCTITTH*ETSVHCDFQVA
Trigger: TGCAACTTGGAAATCACAGTGAACTGATGTCTCCCAGTGAGTCGTGATTGTACACGATCTTCCCAGGAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450124.1
CDS CCA 72 bp AGGTCTGGAGAGATGGATTCAAGATATCTGGGTGATTaGCAGGTTTGGCTCCAAAGCCTTCTATCATTCCAC +
Preference number: 6 (lower is better)
Translates to: RSGEMDSRYLGD*QVWLQSLLSFH
Trigger: GTGGAATGATAGAAGGCTTTGGAGCCAAACCTGCCAATCACCCAGATATCTTGAATCCATCTCTCCAGACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471913.5
CDS GCA 72 bp GATTCAGCCAAGTTGCAGATCATACTCTGGTCTGTCTaGATTGTGAATAATGAAGTATCCTGGGGCTGTGTG +
Preference number: 6 (lower is better)
Translates to: DSAKLQIILWSV*IVNNEVSWGCV
Trigger: CACACAGCCCCAGGATACTTCATTATTCACAATGCAGACAGACCAGAGTATGATCTGCAACTTGGCTGAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356264.7
ENST00000462072.1
CDS GCA 72 bp GGTATGATCAAGTTGCAGATCATACTCTGGTCTGTCTaGATTGTGAATAATGAAGTATCCTGGGGCTGTGTG +
Preference number: 6 (lower is better)
Translates to: GMIKLQIILWSV*IVNNEVSWGCV
Trigger: CACACAGCCCCAGGATACTTCATTATTCACAATGCAGACAGACCAGAGTATGATCTGCAACTTGATCATACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325590.9
ENST00000441628.5
ENST00000467580.5
ENST00000471913.5
CDS GCA 72 bp GTGATTTCCAAGTTGCAGATCATACTCTGGTCTGTCTaGATTGTGAATAATGAAGTATCCTGGGGCTGTGTG +
Preference number: 6 (lower is better)
Translates to: VISKLQIILWSV*IVNNEVSWGCV
Trigger: CACACAGCCCCAGGATACTTCATTATTCACAATGCAGACAGACCAGAGTATGATCTGCAACTTGGAAATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450124.1
CDS CCA 72 bp TTGAGATCTTTGAATTTCTTCGGCCAACCCACTGTCTaGAGTTTCCTCCATGATCAGGTTACACAAGGAAAG +
Preference number: 6 (lower is better)
Translates to: LRSLNFFGQPTV*SFLHDQVTQGK
Trigger: CTTTCCTTGTGTAACCTGATCATGGAGGAAACTCCAGACAGTGGGTTGGCCGAAGAAATTCAAAGATCTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441628.5
CDS CAA 90 bp GGCCATCTGGTATACCAGAGAATCCTGTTATATCCAAATTATTCATaGCTGAATCCAAGCTTGGCTGCCAGATTTGACCTGGATCTGTTC +
Preference number: 6 (lower is better)
Translates to: GHLVYQRILLYPNYS*LNPSLAARFDLDLF
Trigger: GAACAGATCCAGGTCAAATCTGGCAGCCAAGCTTGGATTCAGCAATGAATAATTTGGATATAACAGGATTCTCTGGTATACCAGATGGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471913.5
CDS CAA 90 bp TGTTCCCTACAATCACCTGCTAGTAAGTCCACCTTCAGTTCTTCCTaGTGCTCAACTACATCTGAATGTGTCCAGCTATTATCTAAGCCT +
Preference number: 6 (lower is better)
Translates to: CSLQSPASKSTFSSS*CSTTSECVQLLSKP
Trigger: AGGCTTAGATAATAGCTGGACACATTCAGATGTAGTTGAGCACAAGGAAGAACTGAAGGTGGACTTACTAGCAGGTGATTGTAGGGAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471913.5
CDS CAA 90 bp CCATATCTCTGGTTAGCAATTTCATCTTCAGATAAATCTGAGTTGTaGATGTCCTGGTCTCGGGAACTAGCAGAACTCTCAGTGCTAGCA +
Preference number: 6 (lower is better)
Translates to: PYLWLAISSSDKSEL*MSWSRELAELSVLA
Trigger: TGCTAGCACTGAGAGTTCTGCTAGTTCCCGAGACCAGGACATCAACAACTCAGATTTATCTGAAGATGAAATTGCTAACCAGAGATATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471913.5
CDS GCA 72 bp GATTTGACCTGGATCTGTTCCCCAAGAGTCTATCTCTaGAATTCTTGGCAAGTTAACAGTATGACTACGGTT +
Preference number: 6 (lower is better)
Translates to: DLTWICSPRVYL*NSWQVNSMTTV
Trigger: AACCGTAGTCATACTGTTAACTTGCCAAGAATTGCAGAGATAGACTCTTGGGGAACAGATCCAGGTCAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471913.5
CDS GCA 72 bp GTGGTTAATAGAATCCAGACAACTGGCAAATCCACTTaGTTGGCCATCTGGTATACCAGAGAATCCTGTTAT +
Preference number: 6 (lower is better)
Translates to: VVNRIQTTGKST*LAIWYTRESCY
Trigger: ATAACAGGATTCTCTGGTATACCAGATGGCCAAGCAAGTGGATTTGCCAGTTGTCTGGATTCTATTAACCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471913.5
CDS CCA 72 bp CAGAAGCCGGCTGTACCAAATCAGTGCTTGTCTGTATaGGTAAAGAAAATAGTAACAATAAGGCGAGAGAGA +
Preference number: 6 (lower is better)
Translates to: QKPAVPNQCLSV*VKKIVTIRRER
Trigger: TCTCTCTCGCCTTATTGTTACTATTTTCTTTACCCATACAGACAAGCACTGATTTGGTACAGCCGGCTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462072.1
CDS CCA 72 bp CCACCAGAAGCCTCGTCTTTGTCAGCCTCTATTTCTTaGTACAACAATCCATATCTCTGGTTAGCAATTTCA +
Preference number: 6 (lower is better)
Translates to: PPEASSLSASIS*YNNPYLWLAIS
Trigger: TGAAATTGCTAACCAGAGATATGGATTGTTGTACCAAGAAATAGAGGCTGACAAAGACGAGGCTTCTGGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471913.5
CDS CAA 72 bp CAATCACCTGCTAGTAAGTCCACCTTCAGTTCTTCCTaGTGCTCAACTACATCTGAATGTGTCCAGCTATTA +
Preference number: 6 (lower is better)
Translates to: QSPASKSTFSSS*CSTTSECVQLL
Trigger: TAATAGCTGGACACATTCAGATGTAGTTGAGCACAAGGAAGAACTGAAGGTGGACTTACTAGCAGGTGATTG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471913.5
CDS CAA 72 bp CTCTGGTTAGCAATTTCATCTTCAGATAAATCTGAGTaGTTGATGTCCTGGTCTCGGGAACTAGCAGAACTC +
Preference number: 6 (lower is better)
Translates to: LWLAISSSDKSE*LMSWSRELAEL
Trigger: GAGTTCTGCTAGTTCCCGAGACCAGGACATCAACAACTCAGATTTATCTGAAGATGAAATTGCTAACCAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471913.5
CDS CAA 90 bp ACTTCATTCTGGGAAGGTGTTGTCACACTGATTTCTGGAACAAAGTaGTCCTCAAAGAAACTGATGATGTTCTCCTGCTGCAGTTCCTTT +
Preference number: 6 (lower is better)
Translates to: TSFWEGVVTLISGTK*SSKKLMMFSCCSSF
Trigger: AAAGGAACTGCAGCAGGAGAACATCATCAGTTTCTTTGAGGACAACTTTGTTCCAGAAATCAGTGTGACAACACCTTCCCAGAATGAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325590.9
ENST00000356264.7
ENST00000441628.5
CDS TCA 72 bp GAGTCTATCTCTGCAATTCTTGGCAAGTTAACAGTATaGCTACGGTTCTCAGTTACTGTTCTTTCAGACCCT +
Preference number: 6 (lower is better)
Translates to: ESISAILGKLTV*LRFSVTVLSDP
Trigger: AGGGTCTGAAAGAACAGTAACTGAGAACCGTAGTCATACTGTTAACTTGCCAAGAATTGCAGAGATAGACTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471913.5
CDS GCA 72 bp CTCACACTGAATTTCTTCAGCATCTGTACTGTCTTGTaGTGGGTAAAATATCATATCATGGTTGGGAGTGTC +
Preference number: 6 (lower is better)
Translates to: LTLNFFSICTVL*WVKYHIMVGSV
Trigger: GACACTCCCAACCATGATATGATATTTTACCCAGCACAAGACAGTACAGATGCTGAAGAAATTCAGTGTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471913.5
CDS CCA 72 bp CAGTTCACTGTGATTTCCAAGTTGCAGATCATACTCTaGTCTGTCTGCATTGTGAATAATGAAGTATCCTGG +
Preference number: 6 (lower is better)
Translates to: QFTVISKLQIIL*SVCIVNNEVSW
Trigger: CCAGGATACTTCATTATTCACAATGCAGACAGACCAGAGTATGATCTGCAACTTGGAAATCACAGTGAACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450124.1
CDS CCA 72 bp ATCTTCAATATTAGATACAGAGTAGGTCTGGAGAGATaGATTCAAGATATCTGGGTGATTGGCAGGTTTGGC +
Preference number: 6 (lower is better)
Translates to: IFNIRYRVGLER*IQDIWVIGRFG
Trigger: GCCAAACCTGCCAATCACCCAGATATCTTGAATCCATCTCTCCAGACCTACTCTGTATCTAATATTGAAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471913.5
CDS CCA 72 bp TTAATAGAATCCAGACAACTGGCAAATCCACTTGCTTaGCCATCTGGTATACCAGAGAATCCTGTTATATCC +
Preference number: 6 (lower is better)
Translates to: LIESRQLANPLA*PSGIPENPVIS
Trigger: GGATATAACAGGATTCTCTGGTATACCAGATGGCCAAGCAAGTGGATTTGCCAGTTGTCTGGATTCTATTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471913.5
CDS CAA 72 bp GTTAATAGAATCCAGACAACTGGCAAATCCACTTGCTaGGCCATCTGGTATACCAGAGAATCCTGTTATATC +
Preference number: 6 (lower is better)
Translates to: VNRIQTTGKSTC*AIWYTRESCYI
Trigger: GATATAACAGGATTCTCTGGTATACCAGATGGCCAAGCAAGTGGATTTGCCAGTTGTCTGGATTCTATTAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471913.5
CDS CAA 90 bp AGGCCAGTGGTTAATAGAATCCAGACAACTGGCAAATCCACTTGCTaGGCCATCTGGTATACCAGAGAATCCTGTTATATCCAAATTATT +
Preference number: 6 (lower is better)
Translates to: RPVVNRIQTTGKSTC*AIWYTRESCYIQII
Trigger: AATAATTTGGATATAACAGGATTCTCTGGTATACCAGATGGCCAAGCAAGTGGATTTGCCAGTTGTCTGGATTCTATTAACCACTGGCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471913.5
CDS CAA 90 bp AATCCATATCTCTGGTTAGCAATTTCATCTTCAGATAAATCTGAGTaGTTGATGTCCTGGTCTCGGGAACTAGCAGAACTCTCAGTGCTA +
Preference number: 6 (lower is better)
Translates to: NPYLWLAISSSDKSE*LMSWSRELAELSVL
Trigger: TAGCACTGAGAGTTCTGCTAGTTCCCGAGACCAGGACATCAACAACTCAGATTTATCTGAAGATGAAATTGCTAACCAGAGATATGGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471913.5
CDS CCA 72 bp CTATTATCTAAGCCTTCTGTATCTCTGATAGGCCAGTaGTTAATAGAATCCAGACAACTGGCAAATCCACTT +
Preference number: 6 (lower is better)
Translates to: LLSKPSVSLIGQ*LIESRQLANPL
Trigger: AAGTGGATTTGCCAGTTGTCTGGATTCTATTAACCACTGGCCTATCAGAGATACAGAAGGCTTAGATAATAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471913.5
CDS CAA 72 bp AGTCTCACACTGAATTTCTTCAGCATCTGTACTGTCTaGTGCTGGGTAAAATATCATATCATGGTTGGGAGT +
Preference number: 6 (lower is better)
Translates to: SLTLNFFSICTV*CWVKYHIMVGS
Trigger: ACTCCCAACCATGATATGATATTTTACCCAGCACAAGACAGTACAGATGCTGAAGAAATTCAGTGTGAGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471913.5
CDS CAA 72 bp GTATACCAGAGAATCCTGTTATATCCAAATTATTCATaGCTGAATCCAAGCTTGGCTGCCAGATTTGACCTG +
Preference number: 6 (lower is better)
Translates to: VYQRILLYPNYS*LNPSLAARFDL
Trigger: CAGGTCAAATCTGGCAGCCAAGCTTGGATTCAGCAATGAATAATTTGGATATAACAGGATTCTCTGGTATAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471913.5
CDS CCA 72 bp TCAGCCTCTATTTCTTGGTACAACAATCCATATCTCTaGTTAGCAATTTCATCTTCAGATAAATCTGAGTTG +
Preference number: 6 (lower is better)
Translates to: SASISWYNNPYL*LAISSSDKSEL
Trigger: CAACTCAGATTTATCTGAAGATGAAATTGCTAACCAGAGATATGGATTGTTGTACCAAGAAATAGAGGCTGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471913.5