RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AMPD3 (Homo sapiens)

Ensembl gene IDs: ENSG00000133805

Ensembl transcript IDs: ENST00000396553.6, ENST00000396554.7, ENST00000444303.6, ENST00000524866.5, ENST00000527261.5, ENST00000527369.1, ENST00000528723.5, ENST00000529507.5, ENST00000529744.1, ENST00000529834.5, ENST00000529835.6, ENST00000531227.1, ENST00000532250.5, ENST00000532966.1, ENST00000533116.1, ENST00000534047.5

Found 963 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGTCGTAGGGGTCCATGTGCAGGCCGTCAAACACCTGCCGCAGGGTaGTCTTCCGGCCCCGCTTCTCTGCCACAGTCCTGTCAGGCTCCG +
Preference number: 1 (lower is better)
Translates to: GRRGPCAGRQTPAAG*SSGPASLPQSCQAP
Trigger: CGGAGCCTGACAGGACTGTGGCAGAGAAGCGGGGCCGGAAGATCACCCTGCGGCAGGTGTTTGACGGCCTGCACATGGACCCCTACGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534047.5
3UTR TCA 90 bp GGTGGAATGTCTGCCGGCCCGCGTGGACATCCAGTGAGTCCACAGTaGGGTCGTAGGGGTCCATGTGCAGGCCGTCAAACACCTGCCGCA +
Preference number: 1 (lower is better)
Translates to: GGMSAGPRGHPVSPQ*GRRGPCAGRQTPAA
Trigger: TGCGGCAGGTGTTTGACGGCCTGCACATGGACCCCTACGACCTCACTGTGGACTCACTGGATGTCCACGCGGGCCGGCAGACATTCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534047.5
3UTR CCA 90 bp CCTGGCCCCAACAGTTCAGGCACTGGCAGTTTCAAGAGAAATACTTaGAAAATTAGGAACAAGTATAGACAAGTGCTCAGCTCCCAGATC +
Preference number: 1 (lower is better)
Translates to: PGPNSSGTGSFKRNT*KIRNKYRQVLSSQI
Trigger: GATCTGGGAGCTGAGCACTTGTCTATACTTGTTCCTAATTTTCCAAGTATTTCTCTTGAAACTGCCAGTGCCTGAACTGTTGGGGCCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
3UTR CCA 90 bp CCAGAGGCTGAAATGAACAACTACCAATTAGCCTACCTGGGCCAATaGAGAAAAGTATGGCAGAAAACCACATGTTACTTGGCATCTGAC +
Preference number: 1 (lower is better)
Translates to: PEAEMNNYQLAYLGQ*RKVWQKTTCYLASD
Trigger: GTCAGATGCCAAGTAACATGTGGTTTTCTGCCATACTTTTCTCCATTGGCCCAGGTAGGCTAATTGGTAGTTGTTCATTTCAGCCTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
3UTR TCA 90 bp TTCAGAGGCATCCTCTTCACAGAGGAAAGTCCTAGTTCGGAATCTTaGCCACTATTAGCCACAGCAGACTTGAAATTGAACCAAAAAGTT +
Preference number: 1 (lower is better)
Translates to: FRGILFTEESPSSES*PLLATADLKLNQKV
Trigger: AACTTTTTGGTTCAATTTCAAGTCTGCTGTGGCTAATAGTGGTCAAGATTCCGAACTAGGACTTTCCTCTGTGAAGAGGATGCCTCTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
3UTR CCA 90 bp GAAACCAAGACTCAGAATAGGAGTGGCTGTTTTCATGAGTACATTTaGCTTCCAACTAGAAAGAGGGAAGGAGGGCTAAATAAAACGGTT +
Preference number: 1 (lower is better)
Translates to: ETKTQNRSGCFHEYI*LPTRKREGGLNKTV
Trigger: AACCGTTTTATTTAGCCCTCCTTCCCTCTTTCTAGTTGGAAGCCAAATGTACTCATGAAAACAGCCACTCCTATTCTGAGTCTTGGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
3UTR TCA 90 bp GCTGAATTGACCAGTGGAGGGGACAGGCATTATAAAGTCACAAGATaGGACAATCTAAAGTCAAATAAGTTCACAGGCAGAAACTGGATT +
Preference number: 1 (lower is better)
Translates to: AELTSGGDRHYKVTR*DNLKSNKFTGRNWI
Trigger: AATCCAGTTTCTGCCTGTGAACTTATTTGACTTTAGATTGTCTCATCTTGTGACTTTATAATGCCTGTCCCCTCCACTGGTCAATTCAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444303.6
3UTR GCA 90 bp GTTTCAAGAGAAATACTTGGAAAATTAGGAACAAGTATAGACAAGTaGTCAGCTCCCAGATCCCCAAGGAGAAGTCACCATCTTGTTACT +
Preference number: 1 (lower is better)
Translates to: VSREILGKLGTSIDK*SAPRSPRRSHHLVT
Trigger: AGTAACAAGATGGTGACTTCTCCTTGGGGATCTGGGAGCTGAGCACTTGTCTATACTTGTTCCTAATTTTCCAAGTATTTCTCTTGAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
3UTR TCA 90 bp ATCTGCCTAGTAAAAAGACTGCATTTATACTTCCATATGCTGAATTaGCCAGTGGAGGGGACAGGCATTATAAAGTCACAAGATGAGACA +
Preference number: 1 (lower is better)
Translates to: ICLVKRLHLYFHMLN*PVEGTGIIKSQDET
Trigger: TGTCTCATCTTGTGACTTTATAATGCCTGTCCCCTCCACTGGTCAATTCAGCATATGGAAGTATAAATGCAGTCTTTTTACTAGGCAGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444303.6
3UTR-3UTR GCA 90 bp GGGTTCTGCTCACTGGTCCAGACGTCCGGGTTTGGGCTCTTGTCGGAAAACATGAGGCCGTCAAACACCTaGCGCAGGGTGATCTTCCGG +
Preference number: 2 (lower is better)
Translates to: GFCSLVQTSGFGLLSENMRPSNT*RRVIFR
Trigger: CCGGAAGATCACCCTGCGGCAGGTGTTTGACGGCCT...CATGTTTTCCGACAAGAGCCCAAACCCGGACGTCTGGACCAGTGAGCAGAACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534047.5
3UTR-3UTR TCA 90 bp CGCAGGGTGATCTTCCGGCCCCGCTTCTCTGCCACAGTCCTGTCAGGCTCCGTCACATCTCATGAAGGCTaGACTTGGATTCCAGAAAGT +
Preference number: 2 (lower is better)
Translates to: RRVIFRPRFSATVLSGSVTSHEG*TWIPES
Trigger: ACTTTCTGGAATCCAAGTTCAGCCTTCATGAGATGT...GACGGAGCCTGACAGGACTGTGGCAGAGAAGCGGGGCCGGAAGATCACCCTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534047.5
3UTR CAA 90 bp AGTAGCTGTAGGGTGGGTTCTGCTCACTGGTCCAGACGTCCGGGTTaGGGCTCTTGTCGGAAAACATGTGGTCGCTGTGCTTGGACTCAT +
Preference number: 2 (lower is better)
Translates to: SSCRVGSAHWSRRPG*GSCRKTCGRCAWTH
Trigger: ATGAGTCCAAGCACAGCGACCACATGTTTTCCGACAAGAGCCCAAACCCGGACGTCTGGACCAGTGAGCAGAACCCACCCTACAGCTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534047.5
3UTR-3UTR GCA 90 bp GTTGGGAGAGTAGACCTTGTGCTGGATGAACCAGTAGGCCAGGTTGGGCCACTCCTGTGCGGCTCCTGGTaGTCCAGCATCTTCTTGTTA +
Preference number: 2 (lower is better)
Translates to: VGRVDLVLDEPVGQVGPLLCGSW*SSIFLL
Trigger: TAACAAGAAGATGCTGGAGCACCAGGAGCCGCACAG...GAGTGGCCCAACCTGGCCTACTGGTTCATCCAGCACAAGGTCTACTCTCCCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534047.5
3UTR-3UTR CCA 90 bp GACAGGAAGCTGAGCTCATTGCATAAGGTCTCATATCGGAATGCCATCCGGATCGCAGCACGCTGTTCCTaGCGATCTCACACAGGTCGC +
Preference number: 2 (lower is better)
Translates to: DRKLSSLHKVSYRNAIRIAARCS*RSHTGR
Trigger: GCGACCTGTGTGAGATCGCCAGGAACAGCGTGCTGC...GATCCGGATGGCATTCCGATATGAGACCTTATGCAATGAGCTCAGCTTCCTGTC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529744.1
ENST00000534047.5
3UTR-3UTR CCA 90 bp GACAGGAAGCTGAGCTCATTGCATAAGGTCTCATATCGGAATGCCATCCGGATCGGTCACGCAGCTCACTaGCCCCCACAGGGTTGTATT +
Preference number: 2 (lower is better)
Translates to: DRKLSSLHKVSYRNAIRIGHAAH*PPQGCI
Trigger: AATACAACCCTGTGGGGGCCAGTGAGCTGCGTGACC...GATCCGGATGGCATTCCGATATGAGACCTTATGCAATGAGCTCAGCTTCCTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534047.5
3UTR-3UTR TCA 90 bp CAGAAAGTTCAGTCGCCGGTGACAATAGGTTTTCGTGGGGCCATCGGTGATGAGCTCAGCTTCCACACTTaGGCTGCAATGGCATATTCT +
Preference number: 2 (lower is better)
Translates to: QKVQSPVTIGFRGAIGDELSFHT*AAMAYS
Trigger: AGAATATGCCATTGCAGCTCAAGTGTGGAAGCTGAG...CTCATCACCGATGGCCCCACGAAAACCTATTGTCACCGGCGACTGAACTTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534047.5
3UTR-3UTR GCA 90 bp CATTGCATAAGGTCTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTCACACAGGTCGCAGGTaGTCAGCTTCCACACTTGAG +
Preference number: 2 (lower is better)
Translates to: HCIRSHIGMPSGSEPHLSHTGRR*SASTLE
Trigger: CTCAAGTGTGGAAGCTGAGCACCTGCGACCTGTGTG...AGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAGACCTTATGCAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529744.1
ENST00000534047.5
3UTR-3UTR CCA 90 bp CTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATTGCAGCACGCTGTTCCTaGCGATCTCACACAGGTCGC +
Preference number: 2 (lower is better)
Translates to: LISECHPDLSHICLSNIIAARCS*RSHTGR
Trigger: GCGACCTGTGTGAGATCGCCAGGAACAGCGTGCTGC...AATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529744.1
ENST00000529834.5
ENST00000534047.5
3UTR-3UTR CCA 90 bp CCGAGCAAAGTACTCTCCTCCCAGATAGTTTTCAGTTTTCAAATACAGGTCACGAGGCTGTGCGGCTCCTaGTGCTCCAGCATCTTCTTG +
Preference number: 2 (lower is better)
Translates to: PSKVLSSQIVFSFQIQVTRLCGS*CSSIFL
Trigger: CAAGAAGATGCTGGAGCACCAGGAGCCGCACAGCCT...CGTGACCTGTATTTGAAAACTGAAAACTATCTGGGAGGAGAGTACTTTGCTCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534047.5
3UTR-3UTR GCA 90 bp TCTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATCACACAGGTCGCAGGTaGTCAGCTTCCACACTTGAG +
Preference number: 2 (lower is better)
Translates to: SHIGMPSGSEPHLSFEYHHTGRR*SASTLE
Trigger: CTCAAGTGTGGAAGCTGAGCACCTGCGACCTGTGTG...ATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529744.1
ENST00000534047.5
3UTR-3UTR CCA 90 bp AATGAACAACTACCAATTAGCCTACCTGGGCCAATGGAGAAAAGTATGGCAGAAGACCAGGGAAAATCCTaGCCCCAACAGTTCAGGCAC +
Preference number: 2 (lower is better)
Translates to: NEQLPISLPGPMEKSMAEDQGKS*PQQFRH
Trigger: GTGCCTGAACTGTTGGGGCCAGGATTTTCCCTGGTC...TTCTGCCATACTTTTCTCCATTGGCCCAGGTAGGCTAATTGGTAGTTGTTCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
3UTR-3UTR CCA 90 bp CTTGACCATCCGAGCAAAGTACTCTCCTCCCAGATAGTTTTCAGTTTTCAAATAGGTCACGCAGCTCACTaGCCCCCACAGGGTTGTATT +
Preference number: 2 (lower is better)
Translates to: LDHPSKVLSSQIVFSFQIGHAAH*PPQGCI
Trigger: AATACAACCCTGTGGGGGCCAGTGAGCTGCGTGACC...TATTTGAAAACTGAAAACTATCTGGGAGGAGAGTACTTTGCTCGGATGGTCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000533116.1
ENST00000534047.5
3UTR-3UTR CCA 90 bp TCTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATCGTGGCTCTGAGTACTaGTACTTGCTCTCCTCCAGC +
Preference number: 2 (lower is better)
Translates to: SHIGMPSGSEPHLSFEYHRGSEY*YLLSSS
Trigger: GCTGGAGGAGAGCAAGTACCAGTACTCAGAGCCACG...ATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534047.5
3UTR-3UTR GCA 90 bp ATCTCTTCTGATTTCATAGCATCAGACAGGAAGCTGAGCTCATTGCATAAGGTCGATGCTTTTGGTTCATaGAGGCGGCCGCATGGATGT +
Preference number: 2 (lower is better)
Translates to: ISSDFIASDRKLSSLHKVDAFGS*RRPHGC
Trigger: ACATCCATGCGGCCGCCTGCATGAACCAAAAGCATC...GACCTTATGCAATGAGCTCAGCTTCCTGTCTGATGCTATGAAATCAGAAGAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534047.5
3UTR-3UTR CCA 90 bp GAAGAAACCAAGACTCAGAATAGGAGTGGCTGTTTTCATGAGTACATTTGGCTTGACCAGGGAAAATCCTaGCCCCAACAGTTCAGGCAC +
Preference number: 2 (lower is better)
Translates to: EETKTQNRSGCFHEYIWLDQGKS*PQQFRH
Trigger: GTGCCTGAACTGTTGGGGCCAGGATTTTCCCTGGTC...AAGCCAAATGTACTCATGAAAACAGCCACTCCTATTCTGAGTCTTGGTTTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
3UTR-3UTR TCA 90 bp TCCCAGATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTCCTAGTTCGGAATCTTaGCCACTATTAGCCACAGCA +
Preference number: 2 (lower is better)
Translates to: SQIPKEKSPSCYSEILTSPSSES*PLLATA
Trigger: TGCTGTGGCTAATAGTGGTCAAGATTCCGAACTAGG...ACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGGGATCTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
3UTR-3UTR TCA 90 bp GGTGAAGAAACCAAGACTCAGAATAGGAGTGGCTGTTTTCATGAGTACATTTGGCCTAGTTCGGAATCTTaGCCACTATTAGCCACAGCA +
Preference number: 2 (lower is better)
Translates to: GEETKTQNRSGCFHEYIWPSSES*PLLATA
Trigger: TGCTGTGGCTAATAGTGGTCAAGATTCCGAACTAGG...CCAAATGTACTCATGAAAACAGCCACTCCTATTCTGAGTCTTGGTTTCTTCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
3UTR-3UTR TCA 90 bp TCTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATCTCAGCTTCCACACTTaGGCTGCAATGGCATATTCT +
Preference number: 2 (lower is better)
Translates to: SHIGMPSGSEPHLSFEYHLSFHT*AAMAYS
Trigger: AGAATATGCCATTGCAGCTCAAGTGTGGAAGCTGAG...ATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529744.1
ENST00000534047.5
3UTR-3UTR GCA 90 bp AATGAACAACTACCAATTAGCCTACCTGGGCCAATGGAGAAAAGTATGGCAGAAACAAGTATAGACAAGTaGTCAGCTCCCAGATCCCCA +
Preference number: 2 (lower is better)
Translates to: NEQLPISLPGPMEKSMAETSIDK*SAPRSP
Trigger: TGGGGATCTGGGAGCTGAGCACTTGTCTATACTTGT...TTCTGCCATACTTTTCTCCATTGGCCCAGGTAGGCTAATTGGTAGTTGTTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
3UTR-3UTR GCA 90 bp ATGGATGTGTGTGTCCACCTTTCTCACGTTATAGAAGTCCCGGTGGGGGTTACTATATTCTTCCATAAGTaGTTCCTTCGTGTAGTGGAA +
Preference number: 2 (lower is better)
Translates to: MDVCVHLSHVIEVPVGVTIFFHK*FLRVVE
Trigger: TTCCACTACACGAAGGAAGCACTTATGGAAGAATAT...AGTAACCCCCACCGGGACTTCTATAACGTGAGAAAGGTGGACACACACATCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534047.5
3UTR-3UTR TCA 90 bp ATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATCCTAGTTCGGAATCTTaGCCACTATTAGCCACAGCA +
Preference number: 2 (lower is better)
Translates to: IPKEKSPSCYSEILTSEHPSSES*PLLATA
Trigger: TGCTGTGGCTAATAGTGGTCAAGATTCCGAACTAGG...ATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
3UTR-3UTR GCA 90 bp GCACCTACTACATACCAGGCACTAGTAACACAGATAAAGAGTACACTGATAAAGACAAGTATAGACAAGTaGTCAGCTCCCAGATCCCCA +
Preference number: 2 (lower is better)
Translates to: APTTYQALVTQIKSTLIKTSIDK*SAPRSP
Trigger: TGGGGATCTGGGAGCTGAGCACTTGTCTATACTTGT...CTTTATCAGTGTACTCTTTATCTGTGTTACTAGTGCCTGGTATGTAGTAGGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396553.6
ENST00000444303.6
3UTR-3UTR CCA 90 bp GAAGAAACCAAGACTCAGAATAGGAGTGGCTGTTTTCATGAGTACATTTGGCTTGCCTACCTGGGCCAATaGAGAAAAGTATGGCAGAAA +
Preference number: 2 (lower is better)
Translates to: EETKTQNRSGCFHEYIWLAYLGQ*RKVWQK
Trigger: TTTCTGCCATACTTTTCTCCATTGGCCCAGGTAGGC...AAGCCAAATGTACTCATGAAAACAGCCACTCCTATTCTGAGTCTTGGTTTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
3UTR-3UTR TCA 90 bp AAAACACAATTTGTCAAGAAGGAAGTCTTCCATCTTAACTCCTTCAAAGTAGCCATGTTACTTGGCATCTaGCCAGGGAAAATCCTGGCC +
Preference number: 2 (lower is better)
Translates to: KTQFVKKEVFHLNSFKVAMLLGI*PGKILA
Trigger: GGCCAGGATTTTCCCTGGTCAGATGCCAAGTAACAT...GGCTACTTTGAAGGAGTTAAGATGGAAGACTTCCTTCTTGACAAATTGTGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
3UTR-3UTR GCA 90 bp GGTCTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATATTCTTCCATAAGTaGTTCCTTCGTGTAGTGGAA +
Preference number: 2 (lower is better)
Translates to: GLISECHPDLSHICLSNIIFFHK*FLRVVE
Trigger: TTCCACTACACGAAGGAAGCACTTATGGAAGAATAT...GATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAGACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529744.1
ENST00000534047.5
3UTR-3UTR TCA 90 bp AAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATGTTAACCCTAGTTCGGAATCTTaGCCACTATTAGCCACAGCA +
Preference number: 2 (lower is better)
Translates to: KEKSPSCYSEILTSEHVNPSSES*PLLATA
Trigger: TGCTGTGGCTAATAGTGGTCAAGATTCCGAACTAGG...GTTAACATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
3UTR-3UTR GCA 90 bp AAAACACAATTTGTCAAGAAGGAAGTCTTCCATCTTAACTCCTTCAAAGTAGCCACAAGTATAGACAAGTaGTCAGCTCCCAGATCCCCA +
Preference number: 2 (lower is better)
Translates to: KTQFVKKEVFHLNSFKVATSIDK*SAPRSP
Trigger: TGGGGATCTGGGAGCTGAGCACTTGTCTATACTTGT...GGCTACTTTGAAGGAGTTAAGATGGAAGACTTCCTTCTTGACAAATTGTGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
3UTR-3UTR CCA 90 bp AAAACACAATTTGTCAAGAAGGAAGTCTTCCATCTTAACTCCTTCAAAGTAGCCGCCTACCTGGGCCAATaGAGAAAAGTATGGCAGAAA +
Preference number: 2 (lower is better)
Translates to: KTQFVKKEVFHLNSFKVAAYLGQ*RKVWQK
Trigger: TTTCTGCCATACTTTTCTCCATTGGCCCAGGTAGGC...GGCTACTTTGAAGGAGTTAAGATGGAAGACTTCCTTCTTGACAAATTGTGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
3UTR-3UTR TCA 90 bp AAAACACAATTTGTCAAGAAGGAAGTCTTCCATCTTAACTCCTTCAAAGTAGCCCAGCCATCCAGAGGCTaGAATGAACAACTACCAATT +
Preference number: 2 (lower is better)
Translates to: KTQFVKKEVFHLNSFKVAQPSRG*NEQLPI
Trigger: AATTGGTAGTTGTTCATTTCAGCCTCTGGATGGCTG...GGCTACTTTGAAGGAGTTAAGATGGAAGACTTCCTTCTTGACAAATTGTGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
3UTR-3UTR CCA 90 bp AAAACACAATTTGTCAAGAAGGAAGTCTTCCATCTTAACTCCTTCAAAGTAGCCCAATGGAGAAAAGTATaGCAGAAAACCACATGTTAC +
Preference number: 2 (lower is better)
Translates to: KTQFVKKEVFHLNSFKVAQWRKV*QKTTCY
Trigger: GTAACATGTGGTTTTCTGCCATACTTTTCTCCATTG...GGCTACTTTGAAGGAGTTAAGATGGAAGACTTCCTTCTTGACAAATTGTGTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
3UTR-3UTR CCA 90 bp AAGGAACAGAGATCATCTAGTCCTGTGCTTTTTGAAGTTCTTCGTTCAAATGAATTTCATGAGTACATTTaGCTTCCAACTAGAAAGAGG +
Preference number: 2 (lower is better)
Translates to: KEQRSSSPVLFEVLRSNEFHEYI*LPTRKR
Trigger: CCTCTTTCTAGTTGGAAGCCAAATGTACTCATGAAA...TTCATTTGAACGAAGAACTTCAAAAAGCACAGGACTAGATGATCTCTGTTCCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
3UTR TCA 72 bp GGTCCATGTGCAGGCCGTCAAACACCTGCCGCAGGGTaGTCTTCCGGCCCCGCTTCTCTGCCACAGTCCTGT +
Preference number: 3 (lower is better)
Translates to: GPCAGRQTPAAG*SSGPASLPQSC
Trigger: ACAGGACTGTGGCAGAGAAGCGGGGCCGGAAGATCACCCTGCGGCAGGTGTTTGACGGCCTGCACATGGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534047.5
3UTR TCA 72 bp GCGGTGGAATGTCTGCCGGCCCGCGTGGACATCCAGTaGGTCCACAGTGAGGTCGTAGGGGTCCATGTGCAG +
Preference number: 3 (lower is better)
Translates to: AVECLPARVDIQ*VHSEVVGVHVQ
Trigger: CTGCACATGGACCCCTACGACCTCACTGTGGACTCACTGGATGTCCACGCGGGCCGGCAGACATTCCACCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534047.5
3UTR TCA 72 bp TCTGCCGGCCCGCGTGGACATCCAGTGAGTCCACAGTaGGGTCGTAGGGGTCCATGTGCAGGCCGTCAAACA +
Preference number: 3 (lower is better)
Translates to: SAGPRGHPVSPQ*GRRGPCAGRQT
Trigger: TGTTTGACGGCCTGCACATGGACCCCTACGACCTCACTGTGGACTCACTGGATGTCCACGCGGGCCGGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534047.5
3UTR TCA 72 bp TCCAGCGCATGTTGGGAGAGTAGACCTTGTGCTGGATaGACCAGTAGGCCAGGTTGGGCCACTCCTCAGGAC +
Preference number: 3 (lower is better)
Translates to: SSACWESRPCAG*TSRPGWATPQD
Trigger: GTCCTGAGGAGTGGCCCAACCTGGCCTACTGGTTCATCCAGCACAAGGTCTACTCTCCCAACATGCGCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534047.5
3UTR CCA 72 bp GGGTGGGTTCTGCTCACTGGTCCAGACGTCCGGGTTTaGGCTCTTGTCGGAAAACATGTGGTCGCTGTGCTT +
Preference number: 3 (lower is better)
Translates to: GWVLLTGPDVRV*ALVGKHVVAVL
Trigger: AAGCACAGCGACCACATGTTTTCCGACAAGAGCCCAAACCCGGACGTCTGGACCAGTGAGCAGAACCCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534047.5
3UTR-3UTR CAA 90 bp GTCCATGTGCAGGCCGTCAAACACCTGCCGCAGGGTGATCTTCCGGCCCCGCTTTTGTCCCAGAAACTTTaGCTTTTCCTGATGCGAGAG +
Preference number: 3 (lower is better)
Translates to: VHVQAVKHLPQGDLPAPLLSQKL*LFLMRE
Trigger: CTCTCGCATCAGGAAAAGCAAAAGTTTCTGGGACAA...AAGCGGGGCCGGAAGATCACCCTGCGGCAGGTGTTTGACGGCCTGCACATGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000534047.5
3UTR TCA 72 bp TCCAACAGCCTGCTGCCTAAATCCGGGGCACCTGGATaGTCCAGCGCATGTTGGGAGAGTAGACCTTGTGCT +
Preference number: 3 (lower is better)
Translates to: SNSLLPKSGAPG*SSACWESRPCA
Trigger: AGCACAAGGTCTACTCTCCCAACATGCGCTGGATCATCCAGGTGCCCCGGATTTAGGCAGCAGGCTGTTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534047.5
3UTR-3UTR CAA 90 bp GTCCATGTGCAGGCCGTCAAACACCTGCCGCAGGGTGATCTTCCGGCCCCGCTTTATTTGGAGTTGAACTaGTCAAAGCGGTGGAATGTC +
Preference number: 3 (lower is better)
Translates to: VHVQAVKHLPQGDLPAPLYLELN*SKRWNV
Trigger: GACATTCCACCGCTTTGACAAGTTCAACTCCAAATA...AAGCGGGGCCGGAAGATCACCCTGCGGCAGGTGTTTGACGGCCTGCACATGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534047.5
3UTR-3UTR CAA 90 bp GTTCTGCTCACTGGTCCAGACGTCCGGGTTTGGGCTCTTGTCGGAAAACATGTGGTCTGGTATGTGTGCTaGATGAAGCGCAGCAGATGC +
Preference number: 3 (lower is better)
Translates to: VLLTGPDVRVWALVGKHVVWYVC*MKRSRC
Trigger: GCATCTGCTGCGCTTCATCAAGCACACATACCAGAC...CACATGTTTTCCGACAAGAGCCCAAACCCGGACGTCTGGACCAGTGAGCAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534047.5
3UTR GCA 72 bp TGGAACTGCATGGGGTCATCGGTGGAAAGAGAAACATaGAGTCCCTTGTGTAGGAATTCCCTCAGAGGGTTC +
Preference number: 3 (lower is better)
Translates to: WNCMGSSVERET*SPLCRNSLRGF
Trigger: GAACCCTCTGAGGGAATTCCTACACAAGGGACTGCATGTTTCTCTTTCCACCGATGACCCCATGCAGTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534047.5
3UTR CCA 72 bp ACCACATGTTACTTGGCATCTGACCAGGGAAAATCCTaGCCCCAACAGTTCAGGCACTGGCAGTTTCAAGAG +
Preference number: 3 (lower is better)
Translates to: TTCYLASDQGKS*PQQFRHWQFQE
Trigger: CTCTTGAAACTGCCAGTGCCTGAACTGTTGGGGCCAGGATTTTCCCTGGTCAGATGCCAAGTAACATGTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
3UTR TCA 72 bp CTCCAGCATCTTCCCAAAGTTTGGCAGCAGCTTCTTTaGCCTAAATATGTCACTGGGGGACAGCAAAGACTC +
Preference number: 3 (lower is better)
Translates to: LQHLPKVWQQLL*PKYVTGGQQRL
Trigger: GAGTCTTTGCTGTCCCCCAGTGACATATTTAGGTCAAAGAAGCTGCTGCCAAACTTTGGGAAGATGCTGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534047.5
3UTR-3UTR CAA 90 bp GGTCTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCGCTCAGCTTCCACACTaGAGCTGCAATGGCATATTC +
Preference number: 3 (lower is better)
Translates to: GLISECHPDLSHICLSNIAQLPH*SCNGIF
Trigger: GAATATGCCATTGCAGCTCAAGTGTGGAAGCTGAGC...GATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529744.1
ENST00000534047.5
3UTR-3UTR CAA 90 bp CCGAGCAAAGTACTCTCCTCCCAGATAGTTTTCAGTTTTCAAATACAGGTCACGCTGGCCCCCACAGGGTaGTATTTGGAGTTGAACTTG +
Preference number: 3 (lower is better)
Translates to: PSKVLSSQIVFSFQIQVTLAPTG*YLELNL
Trigger: CAAGTTCAACTCCAAATACAACCCTGTGGGGGCCAG...CGTGACCTGTATTTGAAAACTGAAAACTATCTGGGAGGAGAGTACTTTGCTCGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000533116.1
ENST00000534047.5
3UTR-3UTR CAA 90 bp AACCTCCTTGACCATCCGAGCAAAGTACTCTCCTCCCAGATAGTTTTCAGTTTTCTGGCCCCCACAGGGTaGTATTTGGAGTTGAACTTG +
Preference number: 3 (lower is better)
Translates to: NLLDHPSKVLSSQIVFSFLAPTG*YLELNL
Trigger: CAAGTTCAACTCCAAATACAACCCTGTGGGGGCCAG...AAAACTGAAAACTATCTGGGAGGAGAGTACTTTGCTCGGATGGTCAAGGAGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000533116.1
ENST00000534047.5
3UTR-3UTR CAA 90 bp ATCTCTTCTGATTTCATAGCATCAGACAGGAAGCTGAGCTCATTGCATAAGGTCTCCAGACGTCCGGGTTaGGGCTCTTGTCGGAAAACA +
Preference number: 3 (lower is better)
Translates to: ISSDFIASDRKLSSLHKVSRRPG*GSCRKT
Trigger: TGTTTTCCGACAAGAGCCCAAACCCGGACGTCTGGA...GACCTTATGCAATGAGCTCAGCTTCCTGTCTGATGCTATGAAATCAGAAGAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534047.5
3UTR-3UTR CAA 90 bp TCCTCCCAGATAGTTTTCAGTTTTCAAATACAGGTCACGCAGCTCACTGGCCCCTATTTGGAGTTGAACTaGTCAAAGCGGTGGAATGTC +
Preference number: 3 (lower is better)
Translates to: SSQIVFSFQIQVTQLTGPYLELN*SKRWNV
Trigger: GACATTCCACCGCTTTGACAAGTTCAACTCCAAATA...GGGGCCAGTGAGCTGCGTGACCTGTATTTGAAAACTGAAAACTATCTGGGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000533116.1
ENST00000534047.5
3UTR-3UTR CAA 90 bp TCAGTTTTCAAATACAGGTCACGCAGCTCACTGGCCCCCACAGGGTTGTATTTGGGATCTGAGCCACATTaGTCTTTCGAATATCATTTC +
Preference number: 3 (lower is better)
Translates to: SVFKYRSRSSLAPTGLYLGSEPH*SFEYHF
Trigger: GAAATGATATTCGAAAGACAAATGTGGCTCAGATCC...CAAATACAACCCTGTGGGGGCCAGTGAGCTGCGTGACCTGTATTTGAAAACTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534047.5
3UTR-3UTR CAA 90 bp GACAGGAAGCTGAGCTCATTGCATAAGGTCTCATATCGGAATGCCATCCGGATCTTACTCTTCAACTCTTaGAACTCGGACATTTCGTTT +
Preference number: 3 (lower is better)
Translates to: DRKLSSLHKVSYRNAIRILLFNS*NSDISF
Trigger: AAACGAAATGTCCGAGTTCAAAGAGTTGAAGAGTAA...GATCCGGATGGCATTCCGATATGAGACCTTATGCAATGAGCTCAGCTTCCTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534047.5
3UTR-3UTR CAA 90 bp CTACCAATTAGCCTACCTGGGCCAATGGAGAAAAGTATGGCAGAAAACCACATGGGAGAAGTCACCATCTaGTTACTCAGAAATACTAAC +
Preference number: 3 (lower is better)
Translates to: LPISLPGPMEKSMAENHMGEVTI*LLRNTN
Trigger: GTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCC...CATGTGGTTTTCTGCCATACTTTTCTCCATTGGCCCAGGTAGGCTAATTGGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
3UTR-3UTR CAA 90 bp GCTTTCTACTTGGCCCCTGGGACCATTGTATCTTCTGAAGTCATCATAGTAGATAAAACCACATGTTACTaGGCATCTGACCAGGGAAAA +
Preference number: 3 (lower is better)
Translates to: AFYLAPGTIVSSEVIIVDKTTCY*ASDQGK
Trigger: TTTTCCCTGGTCAGATGCCAAGTAACATGTGGTTTT...ATCTACTATGATGACTTCAGAAGATACAATGGTCCCAGGGGCCAAGTAGAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396553.6
ENST00000444303.6
3UTR-3UTR CAA 90 bp CTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATTTTGTCCCAGAAACTTTaGCTTTTCCTGATGCGAGAG +
Preference number: 3 (lower is better)
Translates to: LISECHPDLSHICLSNIILSQKL*LFLMRE
Trigger: CTCTCGCATCAGGAAAAGCAAAAGTTTCTGGGACAA...AATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529744.1
ENST00000529834.5
ENST00000534047.5
3UTR TCA 72 bp ATCCTCTTCACAGAGGAAAGTCCTAGTTCGGAATCTTaGCCACTATTAGCCACAGCAGACTTGAAATTGAAC +
Preference number: 3 (lower is better)
Translates to: ILFTEESPSSES*PLLATADLKLN
Trigger: GTTCAATTTCAAGTCTGCTGTGGCTAATAGTGGTCAAGATTCCGAACTAGGACTTTCCTCTGTGAAGAGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
3UTR CCA 72 bp ACTCAGAATAGGAGTGGCTGTTTTCATGAGTACATTTaGCTTCCAACTAGAAAGAGGGAAGGAGGGCTAAAT +
Preference number: 3 (lower is better)
Translates to: TQNRSGCFHEYI*LPTRKREGGLN
Trigger: ATTTAGCCCTCCTTCCCTCTTTCTAGTTGGAAGCCAAATGTACTCATGAAAACAGCCACTCCTATTCTGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
3UTR TCA 72 bp AACTCTTTGAACTCGGACATTTCGTTTAACATCTCATaGAGGCTGAACTTGGATTCCAGAAAGTTCAGTCGC +
Preference number: 3 (lower is better)
Translates to: NSLNSDISFNIS*RLNLDSRKFSR
Trigger: GCGACTGAACTTTCTGGAATCCAAGTTCAGCCTTCATGAGATGTTAAACGAAATGTCCGAGTTCAAAGAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534047.5
3UTR-3UTR CAA 90 bp AAAACACAATTTGTCAAGAAGGAAGTCTTCCATCTTAACTCCTTCAAAGTAGCCAAAACCACATGTTACTaGGCATCTGACCAGGGAAAA +
Preference number: 3 (lower is better)
Translates to: KTQFVKKEVFHLNSFKVAKTTCY*ASDQGK
Trigger: TTTTCCCTGGTCAGATGCCAAGTAACATGTGGTTTT...GGCTACTTTGAAGGAGTTAAGATGGAAGACTTCCTTCTTGACAAATTGTGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
3UTR TCA 72 bp GTCTTCCATCTTAACTCCTTCAAAGTAGCCCCTTTATaGAATGGAGCTTTGAAATTGATTGTGTTTAAGGCA +
Preference number: 3 (lower is better)
Translates to: VFHLNSFKVAPL*NGALKLIVFKA
Trigger: TGCCTTAAACACAATCAATTTCAAAGCTCCATTTCATAAAGGGGCTACTTTGAAGGAGTTAAGATGGAAGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
3UTR-3UTR CAA 90 bp GAACAGAGATCATCTAGTCCTGTGCTTTTTGAAGTTCTTCGTTCAAATGAAAATGGAGAAGTCACCATCTaGTTACTCAGAAATACTAAC +
Preference number: 3 (lower is better)
Translates to: EQRSSSPVLFEVLRSNENGEVTI*LLRNTN
Trigger: GTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCC...ATTTTCATTTGAACGAAGAACTTCAAAAAGCACAGGACTAGATGATCTCTGTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
CDS-3UTR TCA 90 bp CGCAGGGTGATCTTCCGGCCCCGCTTCTCTGCCACAGTCCTGTCAGGCTCCGTCCAGACACCAGGTGGGTaGTGGAGCCGGCTTCCCCAC +
Preference number: 4 (lower is better)
Translates to: RRVIFRPRFSATVLSGSVQTPGG*WSRLPH
Trigger: GTGGGGAAGCCGGCTCCATCACCCACCTGGTGTCTG...GACGGAGCCTGACAGGACTGTGGCAGAGAAGCGGGGCCGGAAGATCACCCTGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534047.5
CDS-3UTR GCA 90 bp TGTCCACCGTGTAGGTCTCCAGGTCGGGGTAGGGTAGGCTGTGCGGCTCCTGGTGCCGGAACAGGAACGTaGTCAGGCCGCGCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: CPPCRSPGRGRVGCAAPGAGTGT*SGRAPC
Trigger: GCAGGGAGCGCGGCCTGAGCACGTTCCTGTTCCGGC...ACCAGGAGCCGCACAGCCTACCCTACCCCGACCTGGAGACCTACACGGTGGACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534047.5
CDS-3UTR GCA 90 bp TGTCCACCGTGTAGGTCTCCAGGTCGGGGTAGGGTAGGCTGTGCGGCTCCTGGTAAGCGGTGGAATGTCTaGCGGCCCGCGTGGACATCC +
Preference number: 4 (lower is better)
Translates to: CPPCRSPGRGRVGCAAPGKRWNV*RPAWTS
Trigger: GGATGTCCACGCGGGCCGGCAGACATTCCACCGCTT...ACCAGGAGCCGCACAGCCTACCCTACCCCGACCTGGAGACCTACACGGTGGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534047.5
CDS-3UTR GCA 90 bp CGCAGGGTGATCTTCCGGCCCCGCTTCTCTGCCACAGTCCTGTCAGGCTCCGTCTGCTGTGGCGGCATTTaGAGAGACAGGGACTGGGAC +
Preference number: 4 (lower is better)
Translates to: RRVIFRPRFSATVLSGSVCCGGI*RDRDWD
Trigger: GTCCCAGTCCCTGTCTCTGCAAATGCCGCCACAGCA...GACGGAGCCTGACAGGACTGTGGCAGAGAAGCGGGGCCGGAAGATCACCCTGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534047.5
CDS-3UTR CCA 90 bp GTTGGGAGAGTAGACCTTGTGCTGGATGAACCAGTAGGCCAGGTTGGGCCACTCGCAAAGGGGACGCGCTaGGCAGAGCGGAGCGGGGCT +
Preference number: 4 (lower is better)
Translates to: VGRVDLVLDEPVGQVGPLAKGTR*AERSGA
Trigger: AGCCCCGCTCCGCTCTGCCCAGCGCGTCCCCTTTGC...GAGTGGCCCAACCTGGCCTACTGGTTCATCCAGCACAAGGTCTACTCTCCCAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534047.5
CDS-3UTR CCA 90 bp CCGTCAAACACCTGCCGCAGGGTGATCTTCCGGCCCCGCTTCTCTGCCACAGTCGCTGGAACTCAGGCATaGCATAGGGTGCTGGCGTGG +
Preference number: 4 (lower is better)
Translates to: PSNTCRRVIFRPRFSATVAGTQA*HRVLAW
Trigger: CCACGCCAGCACCCTATGCCATGCCTGAGTTCCAGC...GACTGTGGCAGAGAAGCGGGGCCGGAAGATCACCCTGCGGCAGGTGTTTGACGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534047.5
CDS-3UTR GCA 90 bp CAGCTCCCGGGCAACCTCCTTGACCATCCGAGCAAAGTACTCTCCTCCCAGATAGTCCCCAGCCAGGGCTaGTGTCTGCTGGCGGCACTG +
Preference number: 4 (lower is better)
Translates to: QLPGNLLDHPSKVLSSQIVPSQG*CLLAAL
Trigger: CAGTGCCGCCAGCAGACAGCAGCCCTGGCTGGGGAC...TATCTGGGAGGAGAGTACTTTGCTCGGATGGTCAAGGAGGTTGCCCGGGAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533116.1
CDS-3UTR CCA 90 bp CCGTCAAACACCTGCCGCAGGGTGATCTTCCGGCCCCGCTTCTCTGCCACAGTCGGTCACGCAGCTCACTaGCCCCCACAGGGTTGTATT +
Preference number: 4 (lower is better)
Translates to: PSNTCRRVIFRPRFSATVGHAAH*PPQGCI
Trigger: AATACAACCCTGTGGGGGCCAGTGAGCTGCGTGACC...GACTGTGGCAGAGAAGCGGGGCCGGAAGATCACCCTGCGGCAGGTGTTTGACGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534047.5
CDS-3UTR TCA 90 bp GTTGGGAGAGTAGACCTTGTGCTGGATGAACCAGTAGGCCAGGTTGGGCCACTCGTATCCGCCCGCGGATaGCCCAGGTACTGGGATGTG +
Preference number: 4 (lower is better)
Translates to: VGRVDLVLDEPVGQVGPLVSARG*PRYWDV
Trigger: CACATCCCAGTACCTGGGTCATCCGCGGGCGGATAC...GAGTGGCCCAACCTGGCCTACTGGTTCATCCAGCACAAGGTCTACTCTCCCAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534047.5
CDS-3UTR TCA 90 bp CTCCAGCTCCCGGGCAACCTCCTTGACCATCCGAGCAAAGTACTCTCCTCCCAGCCAGTGAGTCCACAGTaGGGTCGTAGGGGTCCATGT +
Preference number: 4 (lower is better)
Translates to: LQLPGNLLDHPSKVLSSQPVSPQ*GRRGPC
Trigger: ACATGGACCCCTACGACCTCACTGTGGACTCACTGG...CTGGGAGGAGAGTACTTTGCTCGGATGGTCAAGGAGGTTGCCCGGGAGCTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533116.1
ENST00000534047.5
CDS-3UTR CCA 90 bp GTCCATGTGCAGGCCGTCAAACACCTGCCGCAGGGTGATCTTCCGGCCCCGCTTGTAGTAGCTGTAGGGTaGGTTCTGCTCACTGGTCCA +
Preference number: 4 (lower is better)
Translates to: VHVQAVKHLPQGDLPAPLVVAVG*VLLTGP
Trigger: TGGACCAGTGAGCAGAACCCACCCTACAGCTACTAC...AAGCGGGGCCGGAAGATCACCCTGCGGCAGGTGTTTGACGGCCTGCACATGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534047.5
CDS-3UTR TCA 90 bp TCCTGGCCCCAACAGTTCAGGCACTGGCAGTTTCAAGAGAAATACTTGGAAAATAGCCGAGAGGCTACCTaGAGCGCCCGGGCCGCGCCG +
Preference number: 4 (lower is better)
Translates to: SWPQQFRHWQFQEKYLENSREAT*SARAAP
Trigger: CGGCGCGGCCCGGGCGCTTCAGGTAGCCTCTCGGCT...ATTTTCCAAGTATTTCTCTTGAAACTGCCAGTGCCTGAACTGTTGGGGCCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396554.7
CDS-3UTR TCA 90 bp CAGAAAGTTCAGTCGCCGGTGACAATAGGTTTTCGTGGGGCCATCGGTGATGAGACACCTGCCGCAGGGTaGTCTTCCGGCCCCGCTTCT +
Preference number: 4 (lower is better)
Translates to: QKVQSPVTIGFRGAIGDETPAAG*SSGPAS
Trigger: AGAAGCGGGGCCGGAAGATCACCCTGCGGCAGGTGT...CTCATCACCGATGGCCCCACGAAAACCTATTGTCACCGGCGACTGAACTTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000534047.5
CDS-3UTR TCA 90 bp CCGTCAAACACCTGCCGCAGGGTGATCTTCCGGCCCCGCTTCTCTGCCACAGTCAAATGTTGTCAGCAGTaGGGAAGGCAGACACCAGGT +
Preference number: 4 (lower is better)
Translates to: PSNTCRRVIFRPRFSATVKCCQQ*GRQTPG
Trigger: ACCTGGTGTCTGCCTTCCTCACTGCTGACAACATTT...GACTGTGGCAGAGAAGCGGGGCCGGAAGATCACCCTGCGGCAGGTGTTTGACGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534047.5
CDS-3UTR TCA 90 bp AGTTTTCAAATACAGGTCACGCAGCTCACTGGCCCCCACAGGGTTGTATTTGGAGGCTTTCCAGGGGGCTaGGTCCCCAGCCAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: SFQIQVTQLTGPHRVVFGGFPGG*VPSQGC
Trigger: GCAGCCCTGGCTGGGGACTCAGCCCCCTGGAAAGCC...TCCAAATACAACCCTGTGGGGGCCAGTGAGCTGCGTGACCTGTATTTGAAAACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000533116.1
CDS-3UTR GCA 90 bp GTTGGGAGAGTAGACCTTGTGCTGGATGAACCAGTAGGCCAGGTTGGGCCACTCAGGCCGTCAAACACCTaGCGCAGGGTGATCTTCCGG +
Preference number: 4 (lower is better)
Translates to: VGRVDLVLDEPVGQVGPLRPSNT*RRVIFR
Trigger: CCGGAAGATCACCCTGCGGCAGGTGTTTGACGGCCT...GAGTGGCCCAACCTGGCCTACTGGTTCATCCAGCACAAGGTCTACTCTCCCAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534047.5
CDS-3UTR CCA 90 bp CTCCTCCCAGATAGTTTTCAGTTTTCAAATACAGGTCACGCAGCTCACTGGCCCGGACGGCCGCAGGGCTaGAGCAAAGGGGACGCGCTG +
Preference number: 4 (lower is better)
Translates to: LLPDSFQFSNTGHAAHWPGRPQG*SKGDAL
Trigger: CAGCGCGTCCCCTTTGCTCCAGCCCTGCGGCCGTCC...GGGCCAGTGAGCTGCGTGACCTGTATTTGAAAACTGAAAACTATCTGGGAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000534047.5
CDS-3UTR TCA 90 bp GTCCATGTGCAGGCCGTCAAACACCTGCCGCAGGGTGATCTTCCGGCCCCGCTTCTCAGCTTCCACACTTaGGCTGCAATGGCATATTCT +
Preference number: 4 (lower is better)
Translates to: VHVQAVKHLPQGDLPAPLLSFHT*AAMAYS
Trigger: AGAATATGCCATTGCAGCTCAAGTGTGGAAGCTGAG...AAGCGGGGCCGGAAGATCACCCTGCGGCAGGTGTTTGACGGCCTGCACATGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534047.5
CDS-3UTR TCA 90 bp CCGTCAAACACCTGCCGCAGGGTGATCTTCCGGCCCCGCTTCTCTGCCACAGTCGGCGGTGATCTCTTCTaGTTTCATAGCATCAGACAG +
Preference number: 4 (lower is better)
Translates to: PSNTCRRVIFRPRFSATVGGDLF*FHSIRQ
Trigger: CTGTCTGATGCTATGAAATCAGAAGAGATCACCGCC...GACTGTGGCAGAGAAGCGGGGCCGGAAGATCACCCTGCGGCAGGTGTTTGACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534047.5
CDS-3UTR GCA 90 bp CTCCAGCTCCCGGGCAACCTCCTTGACCATCCGAGCAAAGTACTCTCCTCCCAGCTGTGCGGCTCCTGGTaGTCCAGCATCTTCTTGTTA +
Preference number: 4 (lower is better)
Translates to: LQLPGNLLDHPSKVLSSQLCGSW*SSIFLL
Trigger: TAACAAGAAGATGCTGGAGCACCAGGAGCCGCACAG...CTGGGAGGAGAGTACTTTGCTCGGATGGTCAAGGAGGTTGCCCGGGAGCTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534047.5
CDS-3UTR CCA 90 bp CGCAGGGTGATCTTCCGGCCCCGCTTCTCTGCCACAGTCCTGTCAGGCTCCGTCCCCTCAGAGGGTTCTTaGAATATTCGAGGAACAAAC +
Preference number: 4 (lower is better)
Translates to: RRVIFRPRFSATVLSGSVPSEGS*NIRGTN
Trigger: GTTTGTTCCTCGAATATTCCAAGAACCCTCTGAGGG...GACGGAGCCTGACAGGACTGTGGCAGAGAAGCGGGGCCGGAAGATCACCCTGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534047.5
CDS-3UTR CCA 90 bp CAGCTCCCGGGCAACCTCCTTGACCATCCGAGCAAAGTACTCTCCTCCCAGATACGGCAAGCACAATCATaGTGGCTTTCCAGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: QLPGNLLDHPSKVLSSQIRQAQS*WLSRGL
Trigger: CAGCCCCCTGGAAAGCCACCATGATTGTGCTTGCCG...TATCTGGGAGGAGAGTACTTTGCTCGGATGGTCAAGGAGGTTGCCCGGGAGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533116.1
3UTR CAA 72 bp AGGGTGGGTTCTGCTCACTGGTCCAGACGTCCGGGTTaGGGCTCTTGTCGGAAAACATGTGGTCGCTGTGCT +
Preference number: 4 (lower is better)
Translates to: RVGSAHWSRRPG*GSCRKTCGRCA
Trigger: AGCACAGCGACCACATGTTTTCCGACAAGAGCCCAAACCCGGACGTCTGGACCAGTGAGCAGAACCCACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534047.5
CDS-3UTR TCA 90 bp GTTGGGAGAGTAGACCTTGTGCTGGATGAACCAGTAGGCCAGGTTGGGCCACTCAGACCTTGTGCTGGATaGACCAGTAGGCCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: VGRVDLVLDEPVGQVGPLRPCAG*TSRPGW
Trigger: CCAACCTGGCCTACTGGTTCATCCAGCACAAGGTCT...GAGTGGCCCAACCTGGCCTACTGGTTCATCCAGCACAAGGTCTACTCTCCCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534047.5
CDS-3UTR GCA 90 bp TATAGACAAGTGCTCAGCTCCCAGATCCCCAAGGAGAAGTCACCATCTTGTTACGCCGGAACAGGAACGTaGTCAGGCCGCGCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: YRQVLSSQIPKEKSPSCYAGTGT*SGRAPC
Trigger: GCAGGGAGCGCGGCCTGAGCACGTTCCTGTTCCGGC...GTAACAAGATGGTGACTTCTCCTTGGGGATCTGGGAGCTGAGCACTTGTCTATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR GCA 90 bp TCAGTTTTCAAATACAGGTCACGCAGCTCACTGGCCCCCACAGGGTTGTATTTGCCGGCTTCCCCACAGTaGGGCCGGAACAGGAACGTG +
Preference number: 4 (lower is better)
Translates to: SVFKYRSRSSLAPTGLYLPASPQ*GRNRNV
Trigger: CACGTTCCTGTTCCGGCCGCACTGTGGGGAAGCCGG...CAAATACAACCCTGTGGGGGCCAGTGAGCTGCGTGACCTGTATTTGAAAACTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000534047.5
CDS-3UTR GCA 90 bp CAGCTCCCGGGCAACCTCCTTGACCATCCGAGCAAAGTACTCTCCTCCCAGATACATACACAAAGAGGATaGCCCCCTGGAAGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: QLPGNLLDHPSKVLSSQIHTQRG*PPGRPS
Trigger: AGAGGGCCTTCCAGGGGGGCATCCTCTTTGTGTATG...TATCTGGGAGGAGAGTACTTTGCTCGGATGGTCAAGGAGGTTGCCCGGGAGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534047.5
CDS-3UTR CCA 90 bp GGGTTCTGCTCACTGGTCCAGACGTCCGGGTTTGGGCTCTTGTCGGAAAACATGCGTGGCTCTGAGTACTaGTACTTGCTCTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: GFCSLVQTSGFGLLSENMRGSEY*YLLSSS
Trigger: GCTGGAGGAGAGCAAGTACCAGTACTCAGAGCCACG...CATGTTTTCCGACAAGAGCCCAAACCCGGACGTCTGGACCAGTGAGCAGAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534047.5
CDS-3UTR CCA 90 bp GTTCTGCTCACTGGTCCAGACGTCCGGGTTTGGGCTCTTGTCGGAAAACATGTGGACTCGCTTGTCAGGTaGATCCAACAGCCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: VLLTGPDVRVWALVGKHVDSLVR*IQQPAA
Trigger: GGCAGCAGGCTGTTGGATCCACCTGACAAGCGAGTC...CACATGTTTTCCGACAAGAGCCCAAACCCGGACGTCTGGACCAGTGAGCAGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534047.5
CDS-3UTR TCA 90 bp TATAGACAAGTGCTCAGCTCCCAGATCCCCAAGGAGAAGTCACCATCTTGTTACCAGACACCAGGTGGGTaGTGGAGCCGGCTTCCCCAC +
Preference number: 4 (lower is better)
Translates to: YRQVLSSQIPKEKSPSCYQTPGG*WSRLPH
Trigger: GTGGGGAAGCCGGCTCCATCACCCACCTGGTGTCTG...GTAACAAGATGGTGACTTCTCCTTGGGGATCTGGGAGCTGAGCACTTGTCTATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR TCA 90 bp CTCCAGCTCCCGGGCAACCTCCTTGACCATCCGAGCAAAGTACTCTCCTCCCAGTGGCAGCAGCTTCTTTaGCCTAAATATGTCACTGGG +
Preference number: 4 (lower is better)
Translates to: LQLPGNLLDHPSKVLSSQWQQLL*PKYVTG
Trigger: CCCAGTGACATATTTAGGTCAAAGAAGCTGCTGCCA...CTGGGAGGAGAGTACTTTGCTCGGATGGTCAAGGAGGTTGCCCGGGAGCTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534047.5
CDS-3UTR GCA 90 bp TCCCAGATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTTGCAGCCCCCGTCGGTaGCCTACCTGGGCGCGGAGC +
Preference number: 4 (lower is better)
Translates to: SQIPKEKSPSCYSEILTSCSPRR*PTWARS
Trigger: GCTCCGCGCCCAGGTAGGGCACCGACGGGGGCTGCA...ACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGGGATCTGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396554.7
CDS-3UTR GCA 90 bp ATATTTAAGGAAGAGGTGAAGCTCTCGATGATCTTGGGGGTTGATAGTGGCCTTCGGACGACAGGGCCATaGCGCCGGCCGAAAGGGACG +
Preference number: 4 (lower is better)
Translates to: IFKEEVKLSMILGVDSGLRTTGP*RRPKGT
Trigger: CGTCCCTTTCGGCCGGCGGCATGGCCCTGTCGTCCG...AAGGCCACTATCAACCCCCAAGATCATCGAGAGCTTCACCTCTTCCTTAAATAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534047.5
CDS-3UTR GCA 90 bp CTACCAATTAGCCTACCTGGGCCAATGGAGAAAAGTATGGCAGAAAACCACATGGCCGGAACAGGAACGTaGTCAGGCCGCGCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: LPISLPGPMEKSMAENHMAGTGT*SGRAPC
Trigger: GCAGGGAGCGCGGCCTGAGCACGTTCCTGTTCCGGC...CATGTGGTTTTCTGCCATACTTTTCTCCATTGGCCCAGGTAGGCTAATTGGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR CCA 90 bp GGGTTCTGCTCACTGGTCCAGACGTCCGGGTTTGGGCTCTTGTCGGAAAACATGCAGAGATGTTCAGCTTaGGAAACTGCCGCGGCATCT +
Preference number: 4 (lower is better)
Translates to: GFCSLVQTSGFGLLSENMQRCSA*ETAAAS
Trigger: AGATGCCGCGGCAGTTTCCCAAGCTGAACATCTCTG...CATGTTTTCCGACAAGAGCCCAAACCCGGACGTCTGGACCAGTGAGCAGAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534047.5
CDS-3UTR CCA 90 bp CAGAAAGTTCAGTCGCCGGTGACAATAGGTTTTCGTGGGGCCATCGGTGATGAGAGGCTGTGCGGCTCCTaGTGCTCCAGCATCTTCTTG +
Preference number: 4 (lower is better)
Translates to: QKVQSPVTIGFRGAIGDERLCGS*CSSIFL
Trigger: CAAGAAGATGCTGGAGCACCAGGAGCCGCACAGCCT...CTCATCACCGATGGCCCCACGAAAACCTATTGTCACCGGCGACTGAACTTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534047.5
3UTR CAA 72 bp TTCTGCTCACTGGTCCAGACGTCCGGGTTTGGGCTCTaGTCGGAAAACATGTGGTCGCTGTGCTTGGACTCA +
Preference number: 4 (lower is better)
Translates to: FCSLVQTSGFGL*SENMWSLCLDS
Trigger: TGAGTCCAAGCACAGCGACCACATGTTTTCCGACAAGAGCCCAAACCCGGACGTCTGGACCAGTGAGCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534047.5
CDS-3UTR TCA 90 bp TATAGACAAGTGCTCAGCTCCCAGATCCCCAAGGAGAAGTCACCATCTTGTTACTCCGGGGCACCTGGATaGTCCAGCGCATGTTGGGAG +
Preference number: 4 (lower is better)
Translates to: YRQVLSSQIPKEKSPSCYSGAPG*SSACWE
Trigger: CTCCCAACATGCGCTGGATCATCCAGGTGCCCCGGA...GTAACAAGATGGTGACTTCTCCTTGGGGATCTGGGAGCTGAGCACTTGTCTATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR TCA 90 bp TCAGAGGCATCCTCTTCACAGAGGAAAGTCCTAGTTCGGAATCTTGACCACTATCCCAGGAGGCTCAGCTaGGTCAGTGCGTGCGTGCAG +
Preference number: 4 (lower is better)
Translates to: SEASSSQRKVLVRNLDHYPRRLS*VSACVQ
Trigger: CTGCACGCACGCACTGACTCAGCTGAGCCTCCTGGG...ATAGTGGTCAAGATTCCGAACTAGGACTTTCCTCTGTGAAGAGGATGCCTCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528723.5
CDS-3UTR GCA 90 bp CAGAAAGTTCAGTCGCCGGTGACAATAGGTTTTCGTGGGGCCATCGGTGATGAGGCCAGGAGCCGGACTTaGTCATCCACTTCAGAGATG +
Preference number: 4 (lower is better)
Translates to: QKVQSPVTIGFRGAIGDEARSRT*SSTSEM
Trigger: CATCTCTGAAGTGGATGAGCAAGTCCGGCTCCTGGC...CTCATCACCGATGGCCCCACGAAAACCTATTGTCACCGGCGACTGAACTTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534047.5
CDS-3UTR GCA 90 bp CAGAAAGTTCAGTCGCCGGTGACAATAGGTTTTCGTGGGGCCATCGGTGATGAGTCCTTGGCTTCCTTTTaGCCGATGGGGCAGTCCTCT +
Preference number: 4 (lower is better)
Translates to: QKVQSPVTIGFRGAIGDESLASF*PMGQSS
Trigger: AGAGGACTGCCCCATCGGGCAAAAGGAAGCCAAGGA...CTCATCACCGATGGCCCCACGAAAACCTATTGTCACCGGCGACTGAACTTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000534047.5
CDS-3UTR GCA 90 bp TCAGAGGCATCCTCTTCACAGAGGAAAGTCCTAGTTCGGAATCTTGACCACTATGCCCTCTTCCGGAGGTaGAGTATCCGCCCGCGGATG +
Preference number: 4 (lower is better)
Translates to: SEASSSQRKVLVRNLDHYALFRR*SIRPRM
Trigger: CATCCGCGGGCGGATACTGCACCTCCGGAAGAGGGC...ATAGTGGTCAAGATTCCGAACTAGGACTTTCCTCTGTGAAGAGGATGCCTCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR GCA 90 bp TCAGTTTTCAAATACAGGTCACGCAGCTCACTGGCCCCCACAGGGTTGTATTTGAGGCCGTCAAACACCTaGCGCAGGGTGATCTTCCGG +
Preference number: 4 (lower is better)
Translates to: SVFKYRSRSSLAPTGLYLRPSNT*RRVIFR
Trigger: CCGGAAGATCACCCTGCGGCAGGTGTTTGACGGCCT...CAAATACAACCCTGTGGGGGCCAGTGAGCTGCGTGACCTGTATTTGAAAACTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000533116.1
ENST00000534047.5
CDS-3UTR GCA 90 bp AGTATAGACAAGTGCTCAGCTCCCAGATCCCCAAGGAGAAGTCACCATCTTGTTAAGCGGTGGAATGTCTaGCGGCCCGCGTGGACATCC +
Preference number: 4 (lower is better)
Translates to: SIDKCSAPRSPRRSHHLVKRWNV*RPAWTS
Trigger: GGATGTCCACGCGGGCCGGCAGACATTCCACCGCTT...AACAAGATGGTGACTTCTCCTTGGGGATCTGGGAGCTGAGCACTTGTCTATACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR GCA 90 bp TATAGACAAGTGCTCAGCTCCCAGATCCCCAAGGAGAAGTCACCATCTTGTTACGCCACTCCTCAGGACTaGGGCCGTAGATGGAGAGCC +
Preference number: 4 (lower is better)
Translates to: YRQVLSSQIPKEKSPSCYATPQD*GRRWRA
Trigger: GGCTCTCCATCTACGGCCGCAGTCCTGAGGAGTGGC...GTAACAAGATGGTGACTTCTCCTTGGGGATCTGGGAGCTGAGCACTTGTCTATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR GCA 90 bp TTTGACCTAAATATGTCACTGGGGGACAGCAAAGACTCGCTTGTCAGGTGGATCGCCACTCCTCAGGACTaGGGCCGTAGATGGAGAGCC +
Preference number: 4 (lower is better)
Translates to: FDLNMSLGDSKDSLVRWIATPQD*GRRWRA
Trigger: GGCTCTCCATCTACGGCCGCAGTCCTGAGGAGTGGC...GATCCACCTGACAAGCGAGTCTTTGCTGTCCCCCAGTGACATATTTAGGTCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534047.5
CDS-3UTR GCA 90 bp AAGACTGCATTTATACTTCCATATGCTGAATTGACCAGTGGAGGGGACAGGCATGCCGGAACAGGAACGTaGTCAGGCCGCGCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: KTAFILPYAELTSGGDRHAGTGT*SGRAPC
Trigger: GCAGGGAGCGCGGCCTGAGCACGTTCCTGTTCCGGC...ATGCCTGTCCCCTCCACTGGTCAATTCAGCATATGGAAGTATAAATGCAGTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444303.6
CDS-3UTR GCA 90 bp TCCTGGCCCCAACAGTTCAGGCACTGGCAGTTTCAAGAGAAATACTTGGAAAATCCGGCTTCCCCACAGTaGGGCCGGAACAGGAACGTG +
Preference number: 4 (lower is better)
Translates to: SWPQQFRHWQFQEKYLENPASPQ*GRNRNV
Trigger: CACGTTCCTGTTCCGGCCGCACTGTGGGGAAGCCGG...ATTTTCCAAGTATTTCTCTTGAAACTGCCAGTGCCTGAACTGTTGGGGCCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR GCA 90 bp ATCCTGGCCCCAACAGTTCAGGCACTGGCAGTTTCAAGAGAAATACTTGGAAAACCGGCTTCCCCACAGTaGGGCCGGAACAGGAACGTG +
Preference number: 4 (lower is better)
Translates to: ILAPTVQALAVSREILGKPASPQ*GRNRNV
Trigger: CACGTTCCTGTTCCGGCCGCACTGTGGGGAAGCCGG...TTTTCCAAGTATTTCTCTTGAAACTGCCAGTGCCTGAACTGTTGGGGCCAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR GCA 90 bp ATTTCTTCAGAGGCATCCTCTTCACAGAGGAAAGTCCTAGTTCGGAATCTTGACTGCACCCGGGTGAGGTaGTGCCTGCCACCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: ISSEASSSQRKVLVRNLDCTRVR*CLPPRR
Trigger: CCTCCTGGGTGGCAGGCAGCACCTCACCCGGGTGCA...GTCAAGATTCCGAACTAGGACTTTCCTCTGTGAAGAGGATGCCTCTGAAGAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528723.5
CDS-3UTR CCA 90 bp GGTGAAGAAACCAAGACTCAGAATAGGAGTGGCTGTTTTCATGAGTACATTTGGGCAAAGGGGACGCGCTaGGCAGAGCGGAGCGGGGCT +
Preference number: 4 (lower is better)
Translates to: GEETKTQNRSGCFHEYIWAKGTR*AERSGA
Trigger: AGCCCCGCTCCGCTCTGCCCAGCGCGTCCCCTTTGC...CCAAATGTACTCATGAAAACAGCCACTCCTATTCTGAGTCTTGGTTTCTTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396554.7
CDS-3UTR CCA 90 bp AATGAACAACTACCAATTAGCCTACCTGGGCCAATGGAGAAAAGTATGGCAGAAGGACGGCCGCAGGGCTaGAGCAAAGGGGACGCGCTG +
Preference number: 4 (lower is better)
Translates to: NEQLPISLPGPMEKSMAEGRPQG*SKGDAL
Trigger: CAGCGCGTCCCCTTTGCTCCAGCCCTGCGGCCGTCC...TTCTGCCATACTTTTCTCCATTGGCCCAGGTAGGCTAATTGGTAGTTGTTCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396554.7
CDS-3UTR CCA 90 bp AGTATAGACAAGTGCTCAGCTCCCAGATCCCCAAGGAGAAGTCACCATCTTGTTGTCTGCCGGCCCGCGTaGACATCCAGTGAGTCCACA +
Preference number: 4 (lower is better)
Translates to: SIDKCSAPRSPRRSHHLVVCRPA*TSSEST
Trigger: TGTGGACTCACTGGATGTCCACGCGGGCCGGCAGAC...AACAAGATGGTGACTTCTCCTTGGGGATCTGGGAGCTGAGCACTTGTCTATACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR CCA 90 bp CAGTTTTCAAATACAGGTCACGCAGCTCACTGGCCCCCACAGGGTTGTATTTGGAACTTGTCAAAGCGGTaGAATGTCTGCCGGCCCGCG +
Preference number: 4 (lower is better)
Translates to: QFSNTGHAAHWPPQGCIWNLSKR*NVCRPA
Trigger: CGCGGGCCGGCAGACATTCCACCGCTTTGACAAGTT...CCAAATACAACCCTGTGGGGGCCAGTGAGCTGCGTGACCTGTATTTGAAAACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534047.5
CDS-3UTR CCA 90 bp TTTTCAAATACAGGTCACGCAGCTCACTGGCCCCCACAGGGTTGTATTTGGAGTACCAGTAGGCCAGGTTaGGCCACTCCTCAGGACTGC +
Preference number: 4 (lower is better)
Translates to: FSNTGHAAHWPPQGCIWSTSRPG*ATPQDC
Trigger: GCAGTCCTGAGGAGTGGCCCAACCTGGCCTACTGGT...ACTCCAAATACAACCCTGTGGGGGCCAGTGAGCTGCGTGACCTGTATTTGAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534047.5
CDS-3UTR CCA 90 bp AATGAACAACTACCAATTAGCCTACCTGGGCCAATGGAGAAAAGTATGGCAGAACCCAGCGCGAGACTCTaGGGGTCTCGGCCCCGCACA +
Preference number: 4 (lower is better)
Translates to: NEQLPISLPGPMEKSMAEPSARL*GSRPRT
Trigger: TGTGCGGGGCCGAGACCCCCAGAGTCTCGCGCTGGG...TTCTGCCATACTTTTCTCCATTGGCCCAGGTAGGCTAATTGGTAGTTGTTCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000444303.6
CDS-3UTR CCA 90 bp ATTTCTTCAGAGGCATCCTCTTCACAGAGGAAAGTCCTAGTTCGGAATCTTGACGTGCGTGCAGCTGGCTaGGTCCTGTCTGCCGGCTGG +
Preference number: 4 (lower is better)
Translates to: ISSEASSSQRKVLVRNLDVRAAG*VLSAGW
Trigger: CCAGCCGGCAGACAGGACCCAGCCAGCTGCACGCAC...GTCAAGATTCCGAACTAGGACTTTCCTCTGTGAAGAGGATGCCTCTGAAGAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528723.5
CDS-3UTR TCA 90 bp TCCTGGCCCCAACAGTTCAGGCACTGGCAGTTTCAAGAGAAATACTTGGAAAATGTATCCGCCCGCGGATaGCCCAGGTACTGGGATGTG +
Preference number: 4 (lower is better)
Translates to: SWPQQFRHWQFQEKYLENVSARG*PRYWDV
Trigger: CACATCCCAGTACCTGGGTCATCCGCGGGCGGATAC...ATTTTCCAAGTATTTCTCTTGAAACTGCCAGTGCCTGAACTGTTGGGGCCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR TCA 90 bp TCAGAGGCATCCTCTTCACAGAGGAAAGTCCTAGTTCGGAATCTTGACCACTATGTATCCGCCCGCGGATaGCCCAGGTACTGGGATGTG +
Preference number: 4 (lower is better)
Translates to: SEASSSQRKVLVRNLDHYVSARG*PRYWDV
Trigger: CACATCCCAGTACCTGGGTCATCCGCGGGCGGATAC...ATAGTGGTCAAGATTCCGAACTAGGACTTTCCTCTGTGAAGAGGATGCCTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR TCA 90 bp CCGTCAAACACCTGCCGCAGGGTGATCTTCCGGCCCCGCTTCTCTGCCACAGTCTACTCTTCAACTCTTTaGACTCGGACATTTCGTTTA +
Preference number: 4 (lower is better)
Translates to: PSNTCRRVIFRPRFSATVYSSTL*TRTFRL
Trigger: TAAACGAAATGTCCGAGTTCAAAGAGTTGAAGAGTA...GACTGTGGCAGAGAAGCGGGGCCGGAAGATCACCCTGCGGCAGGTGTTTGACGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534047.5
CDS-3UTR TCA 90 bp GCTTTCTACTTGGCCCCTGGGACCATTGTATCTTCTGAAGTCATCATAGTAGATACACCTGCCGCAGGGTaGTCTTCCGGCCCCGCTTCT +
Preference number: 4 (lower is better)
Translates to: AFYLAPGTIVSSEVIIVDTPAAG*SSGPAS
Trigger: AGAAGCGGGGCCGGAAGATCACCCTGCGGCAGGTGT...ATCTACTATGATGACTTCAGAAGATACAATGGTCCCAGGGGCCAAGTAGAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396553.6
ENST00000444303.6
CDS-3UTR TCA 90 bp ATTTCTTCAGAGGCATCCTCTTCACAGAGGAAAGTCCTAGTTCGGAATCTTGACACACCTGCCGCAGGGTaGTCTTCCGGCCCCGCTTCT +
Preference number: 4 (lower is better)
Translates to: ISSEASSSQRKVLVRNLDTPAAG*SSGPAS
Trigger: AGAAGCGGGGCCGGAAGATCACCCTGCGGCAGGTGT...GTCAAGATTCCGAACTAGGACTTTCCTCTGTGAAGAGGATGCCTCTGAAGAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR TCA 90 bp TCAGTTTTCAAATACAGGTCACGCAGCTCACTGGCCCCCACAGGGTTGTATTTGCCAGTGAGTCCACAGTaGGGTCGTAGGGGTCCATGT +
Preference number: 4 (lower is better)
Translates to: SVFKYRSRSSLAPTGLYLPVSPQ*GRRGPC
Trigger: ACATGGACCCCTACGACCTCACTGTGGACTCACTGG...CAAATACAACCCTGTGGGGGCCAGTGAGCTGCGTGACCTGTATTTGAAAACTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000533116.1
ENST00000534047.5
CDS-3UTR TCA 90 bp TTTTCAAATACAGGTCACGCAGCTCACTGGCCCCCACAGGGTTGTATTTGGAGTCGCGTGGACATCCAGTaGGTCCACAGTGAGGTCGTA +
Preference number: 4 (lower is better)
Translates to: FSNTGHAAHWPPQGCIWSRVDIQ*VHSEVV
Trigger: TACGACCTCACTGTGGACTCACTGGATGTCCACGCG...ACTCCAAATACAACCCTGTGGGGGCCAGTGAGCTGCGTGACCTGTATTTGAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000533116.1
ENST00000534047.5
CDS-3UTR TCA 90 bp TCAGTTTTCAAATACAGGTCACGCAGCTCACTGGCCCCCACAGGGTTGTATTTGCCCGGGCAACCTCCTTaGCCATCCGAGCAAAGTACT +
Preference number: 4 (lower is better)
Translates to: SVFKYRSRSSLAPTGLYLPGQPP*PSEQST
Trigger: AGTACTTTGCTCGGATGGTCAAGGAGGTTGCCCGGG...CAAATACAACCCTGTGGGGGCCAGTGAGCTGCGTGACCTGTATTTGAAAACTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000533116.1
ENST00000534047.5
CDS-3UTR TCA 90 bp CATTGCATAAGGTCTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTCCGGGGCACCTGGATaGTCCAGCGCATGTTGGGAG +
Preference number: 4 (lower is better)
Translates to: HCIRSHIGMPSGSEPHLSSGAPG*SSACWE
Trigger: CTCCCAACATGCGCTGGATCATCCAGGTGCCCCGGA...AGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAGACCTTATGCAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534047.5
CDS-3UTR TCA 90 bp GGGTTCTGCTCACTGGTCCAGACGTCCGGGTTTGGGCTCTTGTCGGAAAACATGCATCAGACAGGAAGCTaGGCTCATTGCATAAGGTCT +
Preference number: 4 (lower is better)
Translates to: GFCSLVQTSGFGLLSENMHQTGS*AHCIRS
Trigger: AGACCTTATGCAATGAGCTCAGCTTCCTGTCTGATG...CATGTTTTCCGACAAGAGCCCAAACCCGGACGTCTGGACCAGTGAGCAGAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534047.5
CDS-3UTR TCA 90 bp ATCCTGGCCCCAACAGTTCAGGCACTGGCAGTTTCAAGAGAAATACTTGGAAAATCGGCCCCGCACAGGTaGCTTGCTCCCTGTAGTTGC +
Preference number: 4 (lower is better)
Translates to: ILAPTVQALAVSREILGKSAPHR*LAPCSC
Trigger: GCAACTACAGGGAGCAAGTCACCTGTGCGGGGCCGA...TTTTCCAAGTATTTCTCTTGAAACTGCCAGTGCCTGAACTGTTGGGGCCAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000444303.6
CDS-3UTR TCA 90 bp TTTTCAAATACAGGTCACGCAGCTCACTGGCCCCCACAGGGTTGTATTTGGAGTGGCCCTGTTATTCTCTaGGGCCGCATGACCTCTCAG +
Preference number: 4 (lower is better)
Translates to: FSNTGHAAHWPPQGCIWSGPVIL*GRMTSQ
Trigger: CTGAGAGGTCATGCGGCCTCAGAGAATAACAGGGCC...ACTCCAAATACAACCCTGTGGGGGCCAGTGAGCTGCGTGACCTGTATTTGAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533116.1
CDS-3UTR GCA 90 bp ATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATCGGACGACAGGGCCATaGCGCCGGCCGAAAGGGACG +
Preference number: 4 (lower is better)
Translates to: IPKEKSPSCYSEILTSEHRTTGP*RRPKGT
Trigger: CGTCCCTTTCGGCCGGCGGCATGGCCCTGTCGTCCG...ATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396554.7
CDS-3UTR GCA 90 bp GTACTCTCCTCCCAGATAGTTTTCAGTTTTCAAATACAGGTCACGCAGCTCACTGCCCTCTTCCGGAGGTaGAGTATCCGCCCGCGGATG +
Preference number: 4 (lower is better)
Translates to: VLSSQIVFSFQIQVTQLTALFRR*SIRPRM
Trigger: CATCCGCGGGCGGATACTGCACCTCCGGAAGAGGGC...AGTGAGCTGCGTGACCTGTATTTGAAAACTGAAAACTATCTGGGAGGAGAGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534047.5
CDS-3UTR GCA 90 bp TATAGACAAGTGCTCAGCTCCCAGATCCCCAAGGAGAAGTCACCATCTTGTTACAGGCCGTCAAACACCTaGCGCAGGGTGATCTTCCGG +
Preference number: 4 (lower is better)
Translates to: YRQVLSSQIPKEKSPSCYRPSNT*RRVIFR
Trigger: CCGGAAGATCACCCTGCGGCAGGTGTTTGACGGCCT...GTAACAAGATGGTGACTTCTCCTTGGGGATCTGGGAGCTGAGCACTTGTCTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR GCA 90 bp CTACCAATTAGCCTACCTGGGCCAATGGAGAAAAGTATGGCAGAAAACCACATGAAGCGGTGGAATGTCTaGCGGCCCGCGTGGACATCC +
Preference number: 4 (lower is better)
Translates to: LPISLPGPMEKSMAENHMKRWNV*RPAWTS
Trigger: GGATGTCCACGCGGGCCGGCAGACATTCCACCGCTT...CATGTGGTTTTCTGCCATACTTTTCTCCATTGGCCCAGGTAGGCTAATTGGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR GCA 90 bp GGTGAAGAAACCAAGACTCAGAATAGGAGTGGCTGTTTTCATGAGTACATTTGGGCCGGAACAGGAACGTaGTCAGGCCGCGCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: GEETKTQNRSGCFHEYIWAGTGT*SGRAPC
Trigger: GCAGGGAGCGCGGCCTGAGCACGTTCCTGTTCCGGC...CCAAATGTACTCATGAAAACAGCCACTCCTATTCTGAGTCTTGGTTTCTTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
CDS-3UTR GCA 90 bp CAGATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGGCCGGAACAGGAACGTaGTCAGGCCGCGCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: QIPKEKSPSCYSEILTSEAGTGT*SGRAPC
Trigger: GCAGGGAGCGCGGCCTGAGCACGTTCCTGTTCCGGC...CTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGGGATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR GCA 90 bp TCTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATGCCGGAACAGGAACGTaGTCAGGCCGCGCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: SHIGMPSGSEPHLSFEYHAGTGT*SGRAPC
Trigger: GCAGGGAGCGCGGCCTGAGCACGTTCCTGTTCCGGC...ATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529744.1
ENST00000534047.5
CDS-3UTR GCA 90 bp CTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATTGCCGGAACAGGAACGTaGTCAGGCCGCGCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: LISECHPDLSHICLSNIIAGTGT*SGRAPC
Trigger: GCAGGGAGCGCGGCCTGAGCACGTTCCTGTTCCGGC...AATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529744.1
ENST00000529834.5
ENST00000534047.5
CDS-3UTR GCA 90 bp CCGTCAAACACCTGCCGCAGGGTGATCTTCCGGCCCCGCTTCTCTGCCACAGTCATATTCTTCCATAAGTaGTTCCTTCGTGTAGTGGAA +
Preference number: 4 (lower is better)
Translates to: PSNTCRRVIFRPRFSATVIFFHK*FLRVVE
Trigger: TTCCACTACACGAAGGAAGCACTTATGGAAGAATAT...GACTGTGGCAGAGAAGCGGGGCCGGAAGATCACCCTGCGGCAGGTGTTTGACGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534047.5
CDS-3UTR CCA 90 bp GTTCTGCTCACTGGTCCAGACGTCCGGGTTTGGGCTCTTGTCGGAAAACATGTGCTTCCAATCTTGCTGTaGCGGCATTTGCAGAGACAG +
Preference number: 4 (lower is better)
Translates to: VLLTGPDVRVWALVGKHVLPILL*RHLQRQ
Trigger: CTGTCTCTGCAAATGCCGCCACAGCAAGATTGGAAG...CACATGTTTTCCGACAAGAGCCCAAACCCGGACGTCTGGACCAGTGAGCAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534047.5
CDS-3UTR CCA 90 bp CAGTTTTCAAATACAGGTCACGCAGCTCACTGGCCCCCACAGGGTTGTATTTGGATGCAGGCGGCCGCATaGATGTGTGTGTCCACCTTT +
Preference number: 4 (lower is better)
Translates to: QFSNTGHAAHWPPQGCIWMQAAA*MCVSTF
Trigger: AAAGGTGGACACACACATCCATGCGGCCGCCTGCAT...CCAAATACAACCCTGTGGGGGCCAGTGAGCTGCGTGACCTGTATTTGAAAACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534047.5
CDS-3UTR CCA 90 bp TCCTGGCCCCAACAGTTCAGGCACTGGCAGTTTCAAGAGAAATACTTGGAAAATGTCTGCCGGCCCGCGTaGACATCCAGTGAGTCCACA +
Preference number: 4 (lower is better)
Translates to: SWPQQFRHWQFQEKYLENVCRPA*TSSEST
Trigger: TGTGGACTCACTGGATGTCCACGCGGGCCGGCAGAC...ATTTTCCAAGTATTTCTCTTGAAACTGCCAGTGCCTGAACTGTTGGGGCCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR CCA 90 bp TCCTCCCAGATAGTTTTCAGTTTTCAAATACAGGTCACGCAGCTCACTGGCCCCGGTCACGCAGCTCACTaGCCCCCACAGGGTTGTATT +
Preference number: 4 (lower is better)
Translates to: SSQIVFSFQIQVTQLTGPGHAAH*PPQGCI
Trigger: AATACAACCCTGTGGGGGCCAGTGAGCTGCGTGACC...GGGGCCAGTGAGCTGCGTGACCTGTATTTGAAAACTGAAAACTATCTGGGAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000533116.1
ENST00000534047.5
CDS-3UTR CCA 90 bp AGTATAGACAAGTGCTCAGCTCCCAGATCCCCAAGGAGAAGTCACCATCTTGTTGACTGCGGCCGTAGATaGAGAGCCGTGGCTCTGAGT +
Preference number: 4 (lower is better)
Translates to: SIDKCSAPRSPRRSHHLVDCGRR*RAVALS
Trigger: ACTCAGAGCCACGGCTCTCCATCTACGGCCGCAGTC...AACAAGATGGTGACTTCTCCTTGGGGATCTGGGAGCTGAGCACTTGTCTATACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR CCA 90 bp AGTATAGACAAGTGCTCAGCTCCCAGATCCCCAAGGAGAAGTCACCATCTTGTTACCAGTAGGCCAGGTTaGGCCACTCCTCAGGACTGC +
Preference number: 4 (lower is better)
Translates to: SIDKCSAPRSPRRSHHLVTSRPG*ATPQDC
Trigger: GCAGTCCTGAGGAGTGGCCCAACCTGGCCTACTGGT...AACAAGATGGTGACTTCTCCTTGGGGATCTGGGAGCTGAGCACTTGTCTATACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR CCA 90 bp CTCCTCCCAGATAGTTTTCAGTTTTCAAATACAGGTCACGCAGCTCACTGGCCCGTGGGTTCTGCTCACTaGTCCAGACGTCCGGGTTTG +
Preference number: 4 (lower is better)
Translates to: LLPDSFQFSNTGHAAHWPVGSAH*SRRPGL
Trigger: CAAACCCGGACGTCTGGACCAGTGAGCAGAACCCAC...GGGCCAGTGAGCTGCGTGACCTGTATTTGAAAACTGAAAACTATCTGGGAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534047.5
CDS-3UTR CCA 90 bp AGTATAGACAAGTGCTCAGCTCCCAGATCCCCAAGGAGAAGTCACCATCTTGTTGCAGCACGCTGTTCCTaGCGATCTCACACAGGTCGC +
Preference number: 4 (lower is better)
Translates to: SIDKCSAPRSPRRSHHLVAARCS*RSHTGR
Trigger: GCGACCTGTGTGAGATCGCCAGGAACAGCGTGCTGC...AACAAGATGGTGACTTCTCCTTGGGGATCTGGGAGCTGAGCACTTGTCTATACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR CCA 90 bp TTTGACCTAAATATGTCACTGGGGGACAGCAAAGACTCGCTTGTCAGGTGGATCGCAGCACGCTGTTCCTaGCGATCTCACACAGGTCGC +
Preference number: 4 (lower is better)
Translates to: FDLNMSLGDSKDSLVRWIAARCS*RSHTGR
Trigger: GCGACCTGTGTGAGATCGCCAGGAACAGCGTGCTGC...GATCCACCTGACAAGCGAGTCTTTGCTGTCCCCCAGTGACATATTTAGGTCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534047.5
CDS-3UTR CCA 90 bp ATCCTGGCCCCAACAGTTCAGGCACTGGCAGTTTCAAGAGAAATACTTGGAAAACTCTGCCACTCCTCCTaGGGAAGGTGGAGCCTGCCT +
Preference number: 4 (lower is better)
Translates to: ILAPTVQALAVSREILGKLCHSS*GRWSLP
Trigger: AGGCAGGCTCCACCTTCCCCAGGAGGAGTGGCAGAG...TTTTCCAAGTATTTCTCTTGAAACTGCCAGTGCCTGAACTGTTGGGGCCAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396553.6
CDS-3UTR CCA 90 bp TCAGAGGCATCCTCTTCACAGAGGAAAGTCCTAGTTCGGAATCTTGACCACTATTCCAGCTCCGAGCGCTaGCTGGACTCTGCCACTCCT +
Preference number: 4 (lower is better)
Translates to: SEASSSQRKVLVRNLDHYSSSER*LDSATP
Trigger: AGGAGTGGCAGAGTCCAGCCAGCGCTCGGAGCTGGA...ATAGTGGTCAAGATTCCGAACTAGGACTTTCCTCTGTGAAGAGGATGCCTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396553.6
CDS-3UTR CCA 90 bp CTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATTCTCACTGCTCCCACGTaGGCCTCCAGCTCCGAGCGC +
Preference number: 4 (lower is better)
Translates to: LISECHPDLSHICLSNIILTAPT*ASSSER
Trigger: GCGCTCGGAGCTGGAGGCCCACGTGGGAGCAGTGAG...AATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529834.5
CDS-3UTR CCA 90 bp TCCCAGATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGTGCGTGCGTGCAGCTaGCTGGGTCCTGTCTGCCGG +
Preference number: 4 (lower is better)
Translates to: SQIPKEKSPSCYSEILTSVRACS*LGPVCR
Trigger: CCGGCAGACAGGACCCAGCCAGCTGCACGCACGCAC...ACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGGGATCTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528723.5
CDS-3UTR CCA 90 bp TTTCAGTTTTCAAATACAGGTCACGCAGCTCACTGGCCCCCACAGGGTTGTATTGTCTGCTGGCGGCACTaGAGCAGAAGCTCACTCACC +
Preference number: 4 (lower is better)
Translates to: FQFSNTGHAAHWPPQGCIVCWRH*SRSSLT
Trigger: GGTGAGTGAGCTTCTGCTCCAGTGCCGCCAGCAGAC...AATACAACCCTGTGGGGGCCAGTGAGCTGCGTGACCTGTATTTGAAAACTGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533116.1
CDS-3UTR TCA 90 bp AAATTAGGAACAAGTATAGACAAGTGCTCAGCTCCCAGATCCCCAAGGAGAAGTCCAGGTACTGGGATGTaGTCCGCGGGAAGCGGTGGT +
Preference number: 4 (lower is better)
Translates to: KLGTSIDKCSAPRSPRRSPGTGM*SAGSGG
Trigger: ACCACCGCTTCCCGCGGATCACATCCCAGTACCTGG...ACTTCTCCTTGGGGATCTGGGAGCTGAGCACTTGTCTATACTTGTTCCTAATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR TCA 90 bp ATTTCTTCAGAGGCATCCTCTTCACAGAGGAAAGTCCTAGTTCGGAATCTTGACCCAGGTACTGGGATGTaGTCCGCGGGAAGCGGTGGT +
Preference number: 4 (lower is better)
Translates to: ISSEASSSQRKVLVRNLDPGTGM*SAGSGG
Trigger: ACCACCGCTTCCCGCGGATCACATCCCAGTACCTGG...GTCAAGATTCCGAACTAGGACTTTCCTCTGTGAAGAGGATGCCTCTGAAGAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR TCA 90 bp AAATTAGGAACAAGTATAGACAAGTGCTCAGCTCCCAGATCCCCAAGGAGAAGTGTATCCGCCCGCGGATaGCCCAGGTACTGGGATGTG +
Preference number: 4 (lower is better)
Translates to: KLGTSIDKCSAPRSPRRSVSARG*PRYWDV
Trigger: CACATCCCAGTACCTGGGTCATCCGCGGGCGGATAC...ACTTCTCCTTGGGGATCTGGGAGCTGAGCACTTGTCTATACTTGTTCCTAATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR TCA 90 bp GTGAAGAAACCAAGACTCAGAATAGGAGTGGCTGTTTTCATGAGTACATTTGGCACACCTGCCGCAGGGTaGTCTTCCGGCCCCGCTTCT +
Preference number: 4 (lower is better)
Translates to: VKKPRLRIGVAVFMSTFGTPAAG*SSGPAS
Trigger: AGAAGCGGGGCCGGAAGATCACCCTGCGGCAGGTGT...GCCAAATGTACTCATGAAAACAGCCACTCCTATTCTGAGTCTTGGTTTCTTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
CDS-3UTR TCA 90 bp CAGATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGACACCTGCCGCAGGGTaGTCTTCCGGCCCCGCTTCT +
Preference number: 4 (lower is better)
Translates to: QIPKEKSPSCYSEILTSETPAAG*SSGPAS
Trigger: AGAAGCGGGGCCGGAAGATCACCCTGCGGCAGGTGT...CTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGGGATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR TCA 90 bp CTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATTACACCTGCCGCAGGGTaGTCTTCCGGCCCCGCTTCT +
Preference number: 4 (lower is better)
Translates to: LISECHPDLSHICLSNIITPAAG*SSGPAS
Trigger: AGAAGCGGGGCCGGAAGATCACCCTGCGGCAGGTGT...AATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529834.5
ENST00000534047.5
CDS-3UTR TCA 90 bp CATCCGAGCAAAGTACTCTCCTCCCAGATAGTTTTCAGTTTTCAAATACAGGTCACACCTGCCGCAGGGTaGTCTTCCGGCCCCGCTTCT +
Preference number: 4 (lower is better)
Translates to: HPSKVLSSQIVFSFQIQVTPAAG*SSGPAS
Trigger: AGAAGCGGGGCCGGAAGATCACCCTGCGGCAGGTGT...GACCTGTATTTGAAAACTGAAAACTATCTGGGAGGAGAGTACTTTGCTCGGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000533116.1
ENST00000534047.5
CDS-3UTR TCA 90 bp TATAGACAAGTGCTCAGCTCCCAGATCCCCAAGGAGAAGTCACCATCTTGTTACCGCGTGGACATCCAGTaGGTCCACAGTGAGGTCGTA +
Preference number: 4 (lower is better)
Translates to: YRQVLSSQIPKEKSPSCYRVDIQ*VHSEVV
Trigger: TACGACCTCACTGTGGACTCACTGGATGTCCACGCG...GTAACAAGATGGTGACTTCTCCTTGGGGATCTGGGAGCTGAGCACTTGTCTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR TCA 90 bp AGTATAGACAAGTGCTCAGCTCCCAGATCCCCAAGGAGAAGTCACCATCTTGTTCGCGTGGACATCCAGTaGGTCCACAGTGAGGTCGTA +
Preference number: 4 (lower is better)
Translates to: SIDKCSAPRSPRRSHHLVRVDIQ*VHSEVV
Trigger: TACGACCTCACTGTGGACTCACTGGATGTCCACGCG...AACAAGATGGTGACTTCTCCTTGGGGATCTGGGAGCTGAGCACTTGTCTATACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR TCA 90 bp AAATTAGGAACAAGTATAGACAAGTGCTCAGCTCCCAGATCCCCAAGGAGAAGTTCCGGGGCACCTGGATaGTCCAGCGCATGTTGGGAG +
Preference number: 4 (lower is better)
Translates to: KLGTSIDKCSAPRSPRRSSGAPG*SSACWE
Trigger: CTCCCAACATGCGCTGGATCATCCAGGTGCCCCGGA...ACTTCTCCTTGGGGATCTGGGAGCTGAGCACTTGTCTATACTTGTTCCTAATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR TCA 90 bp AAGACTGCATTTATACTTCCATATGCTGAATTGACCAGTGGAGGGGACAGGCATTCCGGGGCACCTGGATaGTCCAGCGCATGTTGGGAG +
Preference number: 4 (lower is better)
Translates to: KTAFILPYAELTSGGDRHSGAPG*SSACWE
Trigger: CTCCCAACATGCGCTGGATCATCCAGGTGCCCCGGA...ATGCCTGTCCCCTCCACTGGTCAATTCAGCATATGGAAGTATAAATGCAGTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444303.6
CDS-3UTR TCA 90 bp CAGATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCAGACACCAGGTGGGTaGTGGAGCCGGCTTCCCCAC +
Preference number: 4 (lower is better)
Translates to: QIPKEKSPSCYSEILTSEQTPGG*WSRLPH
Trigger: GTGGGGAAGCCGGCTCCATCACCCACCTGGTGTCTG...CTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGGGATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR TCA 90 bp TCCCAGATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTCAGACACCAGGTGGGTaGTGGAGCCGGCTTCCCCAC +
Preference number: 4 (lower is better)
Translates to: SQIPKEKSPSCYSEILTSQTPGG*WSRLPH
Trigger: GTGGGGAAGCCGGCTCCATCACCCACCTGGTGTCTG...ACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGGGATCTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR TCA 90 bp AATGAACAACTACCAATTAGCCTACCTGGGCCAATGGAGAAAAGTATGGCAGAACAGACACCAGGTGGGTaGTGGAGCCGGCTTCCCCAC +
Preference number: 4 (lower is better)
Translates to: NEQLPISLPGPMEKSMAEQTPGG*WSRLPH
Trigger: GTGGGGAAGCCGGCTCCATCACCCACCTGGTGTCTG...TTCTGCCATACTTTTCTCCATTGGCCCAGGTAGGCTAATTGGTAGTTGTTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR TCA 90 bp ATCTCTTCTGATTTCATAGCATCAGACAGGAAGCTGAGCTCATTGCATAAGGTCCAGACACCAGGTGGGTaGTGGAGCCGGCTTCCCCAC +
Preference number: 4 (lower is better)
Translates to: ISSDFIASDRKLSSLHKVQTPGG*WSRLPH
Trigger: GTGGGGAAGCCGGCTCCATCACCCACCTGGTGTCTG...GACCTTATGCAATGAGCTCAGCTTCCTGTCTGATGCTATGAAATCAGAAGAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529744.1
ENST00000534047.5
CDS-3UTR TCA 90 bp CTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATTCAGACACCAGGTGGGTaGTGGAGCCGGCTTCCCCAC +
Preference number: 4 (lower is better)
Translates to: LISECHPDLSHICLSNIIQTPGG*WSRLPH
Trigger: GTGGGGAAGCCGGCTCCATCACCCACCTGGTGTCTG...AATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529744.1
ENST00000529834.5
ENST00000534047.5
CDS-3UTR TCA 90 bp CTACCAATTAGCCTACCTGGGCCAATGGAGAAAAGTATGGCAGAAAACCACATGGGAGCCTGCCTCAAGTaGCCCACAGGAGCAATCCTC +
Preference number: 4 (lower is better)
Translates to: LPISLPGPMEKSMAENHMGACLK*PTGAIL
Trigger: GAGGATTGCTCCTGTGGGTCACTTGAGGCAGGCTCC...CATGTGGTTTTCTGCCATACTTTTCTCCATTGGCCCAGGTAGGCTAATTGGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396553.6
CDS-3UTR TCA 90 bp TCCCAGATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTCCGCGGCATCTCAGCTaGGCCTGGCTCCATGACTGG +
Preference number: 4 (lower is better)
Translates to: SQIPKEKSPSCYSEILTSPRHLS*AWLHDW
Trigger: CCAGTCATGGAGCCAGGCTCAGCTGAGATGCCGCGG...ACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGGGATCTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528723.5
CDS-3UTR GCA 90 bp AAAACACAATTTGTCAAGAAGGAAGTCTTCCATCTTAACTCCTTCAAAGTAGCCCAGAGGGCGCAGCGCTaGGGATCCCCGGCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: KTQFVKKEVFHLNSFKVAQRAQR*GSPARR
Trigger: CCTCCTGGCCGGGGATCCGCAGCGCTGCGCCCTCTG...GGCTACTTTGAAGGAGTTAAGATGGAAGACTTCCTTCTTGACAAATTGTGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396554.7
CDS-3UTR GCA 90 bp TCAGTTTTCAAATACAGGTCACGCAGCTCACTGGCCCCCACAGGGTTGTATTTGGGGACAGGGCATCTTTaGTGTCCTCTTCTCGGAGCA +
Preference number: 4 (lower is better)
Translates to: SVFKYRSRSSLAPTGLYLGTGHL*CPLLGA
Trigger: TGCTCCGAGAAGAGGACAGCAAAGATGCCCTGTCCC...CAAATACAACCCTGTGGGGGCCAGTGAGCTGCGTGACCTGTATTTGAAAACTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000534047.5
CDS-3UTR GCA 90 bp GGTGAAGAAACCAAGACTCAGAATAGGAGTGGCTGTTTTCATGAGTACATTTGGGCCCTCTTCCGGAGGTaGAGTATCCGCCCGCGGATG +
Preference number: 4 (lower is better)
Translates to: GEETKTQNRSGCFHEYIWALFRR*SIRPRM
Trigger: CATCCGCGGGCGGATACTGCACCTCCGGAAGAGGGC...CCAAATGTACTCATGAAAACAGCCACTCCTATTCTGAGTCTTGGTTTCTTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
CDS-3UTR GCA 90 bp TCCCAGATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGCCCTCTTCCGGAGGTaGAGTATCCGCCCGCGGATG +
Preference number: 4 (lower is better)
Translates to: SQIPKEKSPSCYSEILTSALFRR*SIRPRM
Trigger: CATCCGCGGGCGGATACTGCACCTCCGGAAGAGGGC...ACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGGGATCTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR GCA 90 bp CTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATTGCCCTCTTCCGGAGGTaGAGTATCCGCCCGCGGATG +
Preference number: 4 (lower is better)
Translates to: LISECHPDLSHICLSNIIALFRR*SIRPRM
Trigger: CATCCGCGGGCGGATACTGCACCTCCGGAAGAGGGC...AATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529834.5
ENST00000534047.5
CDS-3UTR GCA 90 bp TCCTGGCCCCAACAGTTCAGGCACTGGCAGTTTCAAGAGAAATACTTGGAAAATAGGCCGTCAAACACCTaGCGCAGGGTGATCTTCCGG +
Preference number: 4 (lower is better)
Translates to: SWPQQFRHWQFQEKYLENRPSNT*RRVIFR
Trigger: CCGGAAGATCACCCTGCGGCAGGTGTTTGACGGCCT...ATTTTCCAAGTATTTCTCTTGAAACTGCCAGTGCCTGAACTGTTGGGGCCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR GCA 90 bp GTGAAGAAACCAAGACTCAGAATAGGAGTGGCTGTTTTCATGAGTACATTTGGCCCGGCTTCCCCACAGTaGGGCCGGAACAGGAACGTG +
Preference number: 4 (lower is better)
Translates to: VKKPRLRIGVAVFMSTFGPASPQ*GRNRNV
Trigger: CACGTTCCTGTTCCGGCCGCACTGTGGGGAAGCCGG...GCCAAATGTACTCATGAAAACAGCCACTCCTATTCTGAGTCTTGGTTTCTTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
CDS-3UTR GCA 90 bp TCTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATCCGGCTTCCCCACAGTaGGGCCGGAACAGGAACGTG +
Preference number: 4 (lower is better)
Translates to: SHIGMPSGSEPHLSFEYHPASPQ*GRNRNV
Trigger: CACGTTCCTGTTCCGGCCGCACTGTGGGGAAGCCGG...ATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529744.1
ENST00000534047.5
CDS-3UTR GCA 90 bp CTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATTCCGGCTTCCCCACAGTaGGGCCGGAACAGGAACGTG +
Preference number: 4 (lower is better)
Translates to: LISECHPDLSHICLSNIIPASPQ*GRNRNV
Trigger: CACGTTCCTGTTCCGGCCGCACTGTGGGGAAGCCGG...AATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529744.1
ENST00000529834.5
ENST00000534047.5
CDS-3UTR GCA 90 bp CAGATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCTCAGAGCCGCTCACTaGTCCCACGTGGGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: QIPKEKSPSCYSEILTSELRAAH*SHVGLQ
Trigger: CTGGAGGCCCACGTGGGAGCAGTGAGCGGCTCTGAG...CTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGGGATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396553.6
CDS-3UTR GCA 90 bp CTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATTCTCAGAGCCGCTCACTaGTCCCACGTGGGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: LISECHPDLSHICLSNIILRAAH*SHVGLQ
Trigger: CTGGAGGCCCACGTGGGAGCAGTGAGCGGCTCTGAG...AATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529834.5
CDS-3UTR GCA 90 bp CCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATGTTACCCGGGTGAGGTGCTaGCTGCCACCCAGGAGGCTC +
Preference number: 4 (lower is better)
Translates to: PKEKSPSCYSEILTSEHVTRVRC*LPPRRL
Trigger: GAGCCTCCTGGGTGGCAGGCAGCACCTCACCCGGGT...AACATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528723.5
CDS-3UTR CCA 90 bp AGTATAGACAAGTGCTCAGCTCCCAGATCCCCAAGGAGAAGTCACCATCTTGTTGATGGGGCAGTCCTCTaGGACAGTGAACAGGGACAG +
Preference number: 4 (lower is better)
Translates to: SIDKCSAPRSPRRSHHLVDGAVL*DSEQGQ
Trigger: CTGTCCCTGTTCACTGTCCCAGAGGACTGCCCCATC...AACAAGATGGTGACTTCTCCTTGGGGATCTGGGAGCTGAGCACTTGTCTATACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR CCA 90 bp TTTGACCTAAATATGTCACTGGGGGACAGCAAAGACTCGCTTGTCAGGTGGATCGCAGCTCCCTCTCCTTaGCTTCCTTTTGCCCGATGG +
Preference number: 4 (lower is better)
Translates to: FDLNMSLGDSKDSLVRWIAAPSP*LPFARW
Trigger: CCATCGGGCAAAAGGAAGCCAAGGAGAGGGAGCTGC...GATCCACCTGACAAGCGAGTCTTTGCTGTCCCCCAGTGACATATTTAGGTCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534047.5
CDS-3UTR CCA 90 bp GCTTTCTACTTGGCCCCTGGGACCATTGTATCTTCTGAAGTCATCATAGTAGATCATGGCATAGGGTGCTaGCGTGGGCAGGGAAGTGGC +
Preference number: 4 (lower is better)
Translates to: AFYLAPGTIVSSEVIIVDHGIGC*RGQGSG
Trigger: GCCACTTCCCTGCCCACGCCAGCACCCTATGCCATG...ATCTACTATGATGACTTCAGAAGATACAATGGTCCCAGGGGCCAAGTAGAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396553.6
CDS-3UTR CCA 90 bp ATTTCTTCAGAGGCATCCTCTTCACAGAGGAAAGTCCTAGTTCGGAATCTTGACCATGGCATAGGGTGCTaGCGTGGGCAGGGAAGTGGC +
Preference number: 4 (lower is better)
Translates to: ISSEASSSQRKVLVRNLDHGIGC*RGQGSG
Trigger: GCCACTTCCCTGCCCACGCCAGCACCCTATGCCATG...GTCAAGATTCCGAACTAGGACTTTCCTCTGTGAAGAGGATGCCTCTGAAGAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CCA 90 bp ATCCTGGCCCCAACAGTTCAGGCACTGGCAGTTTCAAGAGAAATACTTGGAAAAGCTGGAACTCAGGCATaGCATAGGGTGCTGGCGTGG +
Preference number: 4 (lower is better)
Translates to: ILAPTVQALAVSREILGKAGTQA*HRVLAW
Trigger: CCACGCCAGCACCCTATGCCATGCCTGAGTTCCAGC...TTTTCCAAGTATTTCTCTTGAAACTGCCAGTGCCTGAACTGTTGGGGCCAGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000529507.5
CDS-3UTR CCA 90 bp TCAGAGGCATCCTCTTCACAGAGGAAAGTCCTAGTTCGGAATCTTGACCACTATGCTGGAACTCAGGCATaGCATAGGGTGCTGGCGTGG +
Preference number: 4 (lower is better)
Translates to: SEASSSQRKVLVRNLDHYAGTQA*HRVLAW
Trigger: CCACGCCAGCACCCTATGCCATGCCTGAGTTCCAGC...ATAGTGGTCAAGATTCCGAACTAGGACTTTCCTCTGTGAAGAGGATGCCTCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CCA 90 bp AGTTTTCAAATACAGGTCACGCAGCTCACTGGCCCCCACAGGGTTGTATTTGGAGGATCATTAGGGCCTTaGCCAGACTCTTGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: SFQIQVTQLTGPHRVVFGGSLGP*PDSWLP
Trigger: AGGCAGCCAAGAGTCTGGCCAAGGCCCTAATGATCC...TCCAAATACAACCCTGTGGGGGCCAGTGAGCTGCGTGACCTGTATTTGAAAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534047.5
CDS-3UTR CCA 90 bp TCAGAGGCATCCTCTTCACAGAGGAAAGTCCTAGTTCGGAATCTTGACCACTATAGGAGGGTGGAAGTCTaGAAGGCCCTCTTCCGGAGG +
Preference number: 4 (lower is better)
Translates to: SEASSSQRKVLVRNLDHYRRVEV*KALFRR
Trigger: CCTCCGGAAGAGGGCCTTCCAGACTTCCACCCTCCT...ATAGTGGTCAAGATTCCGAACTAGGACTTTCCTCTGTGAAGAGGATGCCTCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CCA 90 bp TCAGAGGCATCCTCTTCACAGAGGAAAGTCCTAGTTCGGAATCTTGACCACTATGGCAGTGGAGGAGGGTaGAAGTCTGGAAGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: SEASSSQRKVLVRNLDHYGSGGG*KSGRPS
Trigger: AGAGGGCCTTCCAGACTTCCACCCTCCTCCACTGCC...ATAGTGGTCAAGATTCCGAACTAGGACTTTCCTCTGTGAAGAGGATGCCTCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CCA 90 bp CTACCAATTAGCCTACCTGGGCCAATGGAGAAAAGTATGGCAGAAAACCACATGGGCAGTGGAGGAGGGTaGAAGTCTGGAAGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: LPISLPGPMEKSMAENHMGSGGG*KSGRPS
Trigger: AGAGGGCCTTCCAGACTTCCACCCTCCTCCACTGCC...CATGTGGTTTTCTGCCATACTTTTCTCCATTGGCCCAGGTAGGCTAATTGGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR CCA 90 bp TATAGACAAGTGCTCAGCTCCCAGATCCCCAAGGAGAAGTCACCATCTTGTTACAACTTGTCAAAGCGGTaGAATGTCTGCCGGCCCGCG +
Preference number: 4 (lower is better)
Translates to: YRQVLSSQIPKEKSPSCYNLSKR*NVCRPA
Trigger: CGCGGGCCGGCAGACATTCCACCGCTTTGACAAGTT...GTAACAAGATGGTGACTTCTCCTTGGGGATCTGGGAGCTGAGCACTTGTCTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR CCA 90 bp TCAGTTTTCAAATACAGGTCACGCAGCTCACTGGCCCCCACAGGGTTGTATTTGCGTGGCTCTGAGTACTaGTACTTGCTCTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: SVFKYRSRSSLAPTGLYLRGSEY*YLLSSS
Trigger: GCTGGAGGAGAGCAAGTACCAGTACTCAGAGCCACG...CAAATACAACCCTGTGGGGGCCAGTGAGCTGCGTGACCTGTATTTGAAAACTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000533116.1
ENST00000534047.5
CDS-3UTR CCA 90 bp TCAGAGGCATCCTCTTCACAGAGGAAAGTCCTAGTTCGGAATCTTGACCACTATAAGGCAGACACCAGGTaGGTGATGGAGCCGGCTTCC +
Preference number: 4 (lower is better)
Translates to: SEASSSQRKVLVRNLDHYKADTR*VMEPAS
Trigger: GGAAGCCGGCTCCATCACCCACCTGGTGTCTGCCTT...ATAGTGGTCAAGATTCCGAACTAGGACTTTCCTCTGTGAAGAGGATGCCTCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CCA 90 bp GGTCTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCAAGGCAGACACCAGGTaGGTGATGGAGCCGGCTTCC +
Preference number: 4 (lower is better)
Translates to: GLISECHPDLSHICLSNIKADTR*VMEPAS
Trigger: GGAAGCCGGCTCCATCACCCACCTGGTGTCTGCCTT...GATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529744.1
ENST00000534047.5
CDS-3UTR CCA 90 bp GGTGAAGAAACCAAGACTCAGAATAGGAGTGGCTGTTTTCATGAGTACATTTGGGCTCCGAGCGCTGGCTaGACTCTGCCACTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: GEETKTQNRSGCFHEYIWAPSAG*TLPLLL
Trigger: CAGGAGGAGTGGCAGAGTCCAGCCAGCGCTCGGAGC...CCAAATGTACTCATGAAAACAGCCACTCCTATTCTGAGTCTTGGTTTCTTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396553.6
CDS-3UTR CCA 90 bp CCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATGTTCTCACTGCTCCCACGTaGGCCTCCAGCTCCGAGCGC +
Preference number: 4 (lower is better)
Translates to: PKEKSPSCYSEILTSEHVLTAPT*ASSSER
Trigger: GCGCTCGGAGCTGGAGGCCCACGTGGGAGCAGTGAG...AACATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396553.6
CDS-3UTR CCA 90 bp CAGTTTTCAAATACAGGTCACGCAGCTCACTGGCCCCCACAGGGTTGTATTTGGAACTTGTCAAAGCGGTaGAATGTCTGCCGGCCCTGT +
Preference number: 4 (lower is better)
Translates to: QFSNTGHAAHWPPQGCIWNLSKR*NVCRPC
Trigger: ACAGGGCCGGCAGACATTCCACCGCTTTGACAAGTT...CCAAATACAACCCTGTGGGGGCCAGTGAGCTGCGTGACCTGTATTTGAAAACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533116.1
CDS-3UTR TCA 90 bp GGTGAAGAAACCAAGACTCAGAATAGGAGTGGCTGTTTTCATGAGTACATTTGGCCAGGTACTGGGATGTaGTCCGCGGGAAGCGGTGGT +
Preference number: 4 (lower is better)
Translates to: GEETKTQNRSGCFHEYIWPGTGM*SAGSGG
Trigger: ACCACCGCTTCCCGCGGATCACATCCCAGTACCTGG...CCAAATGTACTCATGAAAACAGCCACTCCTATTCTGAGTCTTGGTTTCTTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
CDS-3UTR TCA 90 bp GTGAAGAAACCAAGACTCAGAATAGGAGTGGCTGTTTTCATGAGTACATTTGGCCCAGGTACTGGGATGTaGTCCGCGGGAAGCGGTGGT +
Preference number: 4 (lower is better)
Translates to: VKKPRLRIGVAVFMSTFGPGTGM*SAGSGG
Trigger: ACCACCGCTTCCCGCGGATCACATCCCAGTACCTGG...GCCAAATGTACTCATGAAAACAGCCACTCCTATTCTGAGTCTTGGTTTCTTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
CDS-3UTR TCA 90 bp CTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATTGTATCCGCCCGCGGATaGCCCAGGTACTGGGATGTG +
Preference number: 4 (lower is better)
Translates to: LISECHPDLSHICLSNIIVSARG*PRYWDV
Trigger: CACATCCCAGTACCTGGGTCATCCGCGGGCGGATAC...AATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529834.5
ENST00000534047.5
CDS-3UTR TCA 90 bp GCACCTACTACATACCAGGCACTAGTAACACAGATAAAGAGTACACTGATAAAGACACCTGCCGCAGGGTaGTCTTCCGGCCCCGCTTCT +
Preference number: 4 (lower is better)
Translates to: APTTYQALVTQIKSTLIKTPAAG*SSGPAS
Trigger: AGAAGCGGGGCCGGAAGATCACCCTGCGGCAGGTGT...CTTTATCAGTGTACTCTTTATCTGTGTTACTAGTGCCTGGTATGTAGTAGGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396553.6
ENST00000444303.6
CDS-3UTR TCA 90 bp TCAGAGGCATCCTCTTCACAGAGGAAAGTCCTAGTTCGGAATCTTGACCACTATCCAGTGAGTCCACAGTaGGGTCGTAGGGGTCCATGT +
Preference number: 4 (lower is better)
Translates to: SEASSSQRKVLVRNLDHYPVSPQ*GRRGPC
Trigger: ACATGGACCCCTACGACCTCACTGTGGACTCACTGG...ATAGTGGTCAAGATTCCGAACTAGGACTTTCCTCTGTGAAGAGGATGCCTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR TCA 90 bp TCCTGGCCCCAACAGTTCAGGCACTGGCAGTTTCAAGAGAAATACTTGGAAAATCGCGTGGACATCCAGTaGGTCCACAGTGAGGTCGTA +
Preference number: 4 (lower is better)
Translates to: SWPQQFRHWQFQEKYLENRVDIQ*VHSEVV
Trigger: TACGACCTCACTGTGGACTCACTGGATGTCCACGCG...ATTTTCCAAGTATTTCTCTTGAAACTGCCAGTGCCTGAACTGTTGGGGCCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR TCA 90 bp TCAGAGGCATCCTCTTCACAGAGGAAAGTCCTAGTTCGGAATCTTGACCACTATCCCGGGCAACCTCCTTaGCCATCCGAGCAAAGTACT +
Preference number: 4 (lower is better)
Translates to: SEASSSQRKVLVRNLDHYPGQPP*PSEQST
Trigger: AGTACTTTGCTCGGATGGTCAAGGAGGTTGCCCGGG...ATAGTGGTCAAGATTCCGAACTAGGACTTTCCTCTGTGAAGAGGATGCCTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR TCA 90 bp TCAGAGGCATCCTCTTCACAGAGGAAAGTCCTAGTTCGGAATCTTGACCACTATGGAGAGCCGTGGCTCTaGGTACTGGTACTTGCTCTC +
Preference number: 4 (lower is better)
Translates to: SEASSSQRKVLVRNLDHYGEPWL*VLVLAL
Trigger: GAGAGCAAGTACCAGTACTCAGAGCCACGGCTCTCC...ATAGTGGTCAAGATTCCGAACTAGGACTTTCCTCTGTGAAGAGGATGCCTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR TCA 90 bp AGTATAGACAAGTGCTCAGCTCCCAGATCCCCAAGGAGAAGTCACCATCTTGTTAGACCTTGTGCTGGATaGACCAGTAGGCCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: SIDKCSAPRSPRRSHHLVRPCAG*TSRPGW
Trigger: CCAACCTGGCCTACTGGTTCATCCAGCACAAGGTCT...AACAAGATGGTGACTTCTCCTTGGGGATCTGGGAGCTGAGCACTTGTCTATACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR TCA 90 bp TCCCAGATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTTCCGGGGCACCTGGATaGTCCAGCGCATGTTGGGAG +
Preference number: 4 (lower is better)
Translates to: SQIPKEKSPSCYSEILTSSGAPG*SSACWE
Trigger: CTCCCAACATGCGCTGGATCATCCAGGTGCCCCGGA...ACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGGGATCTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR TCA 90 bp CTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATTTCCGGGGCACCTGGATaGTCCAGCGCATGTTGGGAG +
Preference number: 4 (lower is better)
Translates to: LISECHPDLSHICLSNIISGAPG*SSACWE
Trigger: CTCCCAACATGCGCTGGATCATCCAGGTGCCCCGGA...AATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529834.5
ENST00000534047.5
CDS-3UTR TCA 90 bp ATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATCAGACACCAGGTGGGTaGTGGAGCCGGCTTCCCCAC +
Preference number: 4 (lower is better)
Translates to: IPKEKSPSCYSEILTSEHQTPGG*WSRLPH
Trigger: GTGGGGAAGCCGGCTCCATCACCCACCTGGTGTCTG...ATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR TCA 90 bp TCAGAGGCATCCTCTTCACAGAGGAAAGTCCTAGTTCGGAATCTTGACCACTATCTGAGCCTGGCTCCATaGCTGGTCCTGAAGATGCCA +
Preference number: 4 (lower is better)
Translates to: SEASSSQRKVLVRNLDHYLSLAP*LVLKMP
Trigger: TGGCATCTTCAGGACCAGTCATGGAGCCAGGCTCAG...ATAGTGGTCAAGATTCCGAACTAGGACTTTCCTCTGTGAAGAGGATGCCTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528723.5
CDS-3UTR GCA 90 bp GTACTCTCCTCCCAGATAGTTTTCAGTTTTCAAATACAGGTCACGCAGCTCACTAGGCATGGCATAGGGTaGTGGCGTGGGCAGGGAAGT +
Preference number: 4 (lower is better)
Translates to: VLSSQIVFSFQIQVTQLTRHGIG*WRGQGS
Trigger: ACTTCCCTGCCCACGCCAGCACCCTATGCCATGCCT...AGTGAGCTGCGTGACCTGTATTTGAAAACTGAAAACTATCTGGGAGGAGAGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534047.5
CDS-3UTR GCA 90 bp AGTATAGACAAGTGCTCAGCTCCCAGATCCCCAAGGAGAAGTCACCATCTTGTTGGCCAGACTCTTGGCTaGCTGCTCATAGTCCTCCAA +
Preference number: 4 (lower is better)
Translates to: SIDKCSAPRSPRRSHHLVGQTLG*LLIVLQ
Trigger: TTGGAGGACTATGAGCAGGCAGCCAAGAGTCTGGCC...AACAAGATGGTGACTTCTCCTTGGGGATCTGGGAGCTGAGCACTTGTCTATACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR GCA 90 bp CCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATGTTGCCCTCTTCCGGAGGTaGAGTATCCGCCCGCGGATG +
Preference number: 4 (lower is better)
Translates to: PKEKSPSCYSEILTSEHVALFRR*SIRPRM
Trigger: CATCCGCGGGCGGATACTGCACCTCCGGAAGAGGGC...AACATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR GCA 90 bp CAGTTTTCAAATACAGGTCACGCAGCTCACTGGCCCCCACAGGGTTGTATTTGGTCCGTCTGGTATGTGTaGTTGATGAAGCGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: QFSNTGHAAHWPPQGCIWSVWYV*LMKRSR
Trigger: TCTGCTGCGCTTCATCAAGCACACATACCAGACGGA...CCAAATACAACCCTGTGGGGGCCAGTGAGCTGCGTGACCTGTATTTGAAAACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000533116.1
ENST00000534047.5
CDS-3UTR GCA 90 bp GGTGAAGAAACCAAGACTCAGAATAGGAGTGGCTGTTTTCATGAGTACATTTGGAAGCGGTGGAATGTCTaGCGGCCCGCGTGGACATCC +
Preference number: 4 (lower is better)
Translates to: GEETKTQNRSGCFHEYIWKRWNV*RPAWTS
Trigger: GGATGTCCACGCGGGCCGGCAGACATTCCACCGCTT...CCAAATGTACTCATGAAAACAGCCACTCCTATTCTGAGTCTTGGTTTCTTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
CDS-3UTR GCA 90 bp CAGATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGAAGCGGTGGAATGTCTaGCGGCCCGCGTGGACATCC +
Preference number: 4 (lower is better)
Translates to: QIPKEKSPSCYSEILTSEKRWNV*RPAWTS
Trigger: GGATGTCCACGCGGGCCGGCAGACATTCCACCGCTT...CTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGGGATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR GCA 90 bp CTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATTAAGCGGTGGAATGTCTaGCGGCCCGCGTGGACATCC +
Preference number: 4 (lower is better)
Translates to: LISECHPDLSHICLSNIIKRWNV*RPAWTS
Trigger: GGATGTCCACGCGGGCCGGCAGACATTCCACCGCTT...AATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529834.5
ENST00000534047.5
CDS-3UTR GCA 90 bp CAGATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGGCCACTCCTCAGGACTaGGGCCGTAGATGGAGAGCC +
Preference number: 4 (lower is better)
Translates to: QIPKEKSPSCYSEILTSEATPQD*GRRWRA
Trigger: GGCTCTCCATCTACGGCCGCAGTCCTGAGGAGTGGC...CTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGGGATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR GCA 90 bp CTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATTGCCACTCCTCAGGACTaGGGCCGTAGATGGAGAGCC +
Preference number: 4 (lower is better)
Translates to: LISECHPDLSHICLSNIIATPQD*GRRWRA
Trigger: GGCTCTCCATCTACGGCCGCAGTCCTGAGGAGTGGC...AATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529834.5
ENST00000534047.5
CDS-3UTR GCA 90 bp ATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATCCGGCTTCCCCACAGTaGGGCCGGAACAGGAACGTG +
Preference number: 4 (lower is better)
Translates to: IPKEKSPSCYSEILTSEHPASPQ*GRNRNV
Trigger: CACGTTCCTGTTCCGGCCGCACTGTGGGGAAGCCGG...ATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR GCA 90 bp CTCCTCCCAGATAGTTTTCAGTTTTCAAATACAGGTCACGCAGCTCACTGGCCCGGTCTCATATCGGAATaGCATCCGGATCTGAGCCAC +
Preference number: 4 (lower is better)
Translates to: LLPDSFQFSNTGHAAHWPGLISE*HPDLSH
Trigger: GTGGCTCAGATCCGGATGGCATTCCGATATGAGACC...GGGCCAGTGAGCTGCGTGACCTGTATTTGAAAACTGAAAACTATCTGGGAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534047.5
CDS-3UTR GCA 90 bp GCACCTACTACATACCAGGCACTAGTAACACAGATAAAGAGTACACTGATAAAGGCGCTGGCTGGACTCTaGCACTCCTCCTGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: APTTYQALVTQIKSTLIKALAGL*HSSWGR
Trigger: CCTTCCCCAGGAGGAGTGGCAGAGTCCAGCCAGCGC...CTTTATCAGTGTACTCTTTATCTGTGTTACTAGTGCCTGGTATGTAGTAGGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396553.6
CDS-3UTR GCA 90 bp TCAGTTTTCAAATACAGGTCACGCAGCTCACTGGCCCCCACAGGGTTGTATTTGGATAGAAGAGAAAGCTaGTTCCGTAGCACCTCCCGG +
Preference number: 4 (lower is better)
Translates to: SVFKYRSRSSLAPTGLYLDRRES*FRSTSR
Trigger: CCGGGAGGTGCTACGGAAGCAGCTTTCTCTTCTATC...CAAATACAACCCTGTGGGGGCCAGTGAGCTGCGTGACCTGTATTTGAAAACTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533116.1
CDS-3UTR GCA 90 bp AGTTTTCAAATACAGGTCACGCAGCTCACTGGCCCCCACAGGGTTGTATTTGGAAAGCGGTGGAATGTCTaGCGGCCCTGTTATTCTCTG +
Preference number: 4 (lower is better)
Translates to: SFQIQVTQLTGPHRVVFGKRWNV*RPCYSL
Trigger: CAGAGAATAACAGGGCCGGCAGACATTCCACCGCTT...TCCAAATACAACCCTGTGGGGGCCAGTGAGCTGCGTGACCTGTATTTGAAAACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533116.1
CDS-3UTR CCA 90 bp AAAACACAATTTGTCAAGAAGGAAGTCTTCCATCTTAACTCCTTCAAAGTAGCCCGTCGGTGCCCTACCTaGGCGCGGAGCGGAGCAGAG +
Preference number: 4 (lower is better)
Translates to: KTQFVKKEVFHLNSFKVARRCPT*ARSGAE
Trigger: CTCTGCTCCGCTCCGCGCCCAGGTAGGGCACCGACG...GGCTACTTTGAAGGAGTTAAGATGGAAGACTTCCTTCTTGACAAATTGTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396554.7
CDS-3UTR CCA 90 bp ATCCTGGCCCCAACAGTTCAGGCACTGGCAGTTTCAAGAGAAATACTTGGAAAAGATGGGGCAGTCCTCTaGGACAGTGAACAGGGACAG +
Preference number: 4 (lower is better)
Translates to: ILAPTVQALAVSREILGKDGAVL*DSEQGQ
Trigger: CTGTCCCTGTTCACTGTCCCAGAGGACTGCCCCATC...TTTTCCAAGTATTTCTCTTGAAACTGCCAGTGCCTGAACTGTTGGGGCCAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR CCA 90 bp CATTGCATAAGGTCTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTGATGGGGCAGTCCTCTaGGACAGTGAACAGGGACAG +
Preference number: 4 (lower is better)
Translates to: HCIRSHIGMPSGSEPHLSDGAVL*DSEQGQ
Trigger: CTGTCCCTGTTCACTGTCCCAGAGGACTGCCCCATC...AGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAGACCTTATGCAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534047.5
CDS-3UTR CCA 90 bp TCCTGGCCCCAACAGTTCAGGCACTGGCAGTTTCAAGAGAAATACTTGGAAAATCTTCCTTTTGCCCGATaGGGCAGTCCTCTGGGACAG +
Preference number: 4 (lower is better)
Translates to: SWPQQFRHWQFQEKYLENLPFAR*GSPLGQ
Trigger: CTGTCCCAGAGGACTGCCCCATCGGGCAAAAGGAAG...ATTTTCCAAGTATTTCTCTTGAAACTGCCAGTGCCTGAACTGTTGGGGCCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR CCA 90 bp TCAGAGGCATCCTCTTCACAGAGGAAAGTCCTAGTTCGGAATCTTGACCACTATCTTCCTTTTGCCCGATaGGGCAGTCCTCTGGGACAG +
Preference number: 4 (lower is better)
Translates to: SEASSSQRKVLVRNLDHYLPFAR*GSPLGQ
Trigger: CTGTCCCAGAGGACTGCCCCATCGGGCAAAAGGAAG...ATAGTGGTCAAGATTCCGAACTAGGACTTTCCTCTGTGAAGAGGATGCCTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CCA 90 bp GGTCTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCCTTCCTTTTGCCCGATaGGGCAGTCCTCTGGGACAG +
Preference number: 4 (lower is better)
Translates to: GLISECHPDLSHICLSNILPFAR*GSPLGQ
Trigger: CTGTCCCAGAGGACTGCCCCATCGGGCAAAAGGAAG...GATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534047.5
CDS-3UTR CCA 90 bp ATCCTGGCCCCAACAGTTCAGGCACTGGCAGTTTCAAGAGAAATACTTGGAAAAGCAGCTCCCTCTCCTTaGCTTCCTTTTGCCCGATGG +
Preference number: 4 (lower is better)
Translates to: ILAPTVQALAVSREILGKAAPSP*LPFARW
Trigger: CCATCGGGCAAAAGGAAGCCAAGGAGAGGGAGCTGC...TTTTCCAAGTATTTCTCTTGAAACTGCCAGTGCCTGAACTGTTGGGGCCAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR CCA 90 bp TCCTGGCCCCAACAGTTCAGGCACTGGCAGTTTCAAGAGAAATACTTGGAAAATGCAGCTCCCTCTCCTTaGCTTCCTTTTGCCCGATGG +
Preference number: 4 (lower is better)
Translates to: SWPQQFRHWQFQEKYLENAAPSP*LPFARW
Trigger: CCATCGGGCAAAAGGAAGCCAAGGAGAGGGAGCTGC...ATTTTCCAAGTATTTCTCTTGAAACTGCCAGTGCCTGAACTGTTGGGGCCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR CCA 90 bp CTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATTCATGGCATAGGGTGCTaGCGTGGGCAGGGAAGTGGC +
Preference number: 4 (lower is better)
Translates to: LISECHPDLSHICLSNIIHGIGC*RGQGSG
Trigger: GCCACTTCCCTGCCCACGCCAGCACCCTATGCCATG...AATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529834.5
ENST00000534047.5
CDS-3UTR CCA 90 bp TCTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATCATGGCATAGGGTGCTaGCGTGGGCAGGGAAGTGGC +
Preference number: 4 (lower is better)
Translates to: SHIGMPSGSEPHLSFEYHHGIGC*RGQGSG
Trigger: GCCACTTCCCTGCCCACGCCAGCACCCTATGCCATG...ATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534047.5
CDS-3UTR CCA 90 bp GCTTTCTACTTGGCCCCTGGGACCATTGTATCTTCTGAAGTCATCATAGTAGATAGGAGGGTGGAAGTCTaGAAGGCCCTCTTCCGGAGG +
Preference number: 4 (lower is better)
Translates to: AFYLAPGTIVSSEVIIVDRRVEV*KALFRR
Trigger: CCTCCGGAAGAGGGCCTTCCAGACTTCCACCCTCCT...ATCTACTATGATGACTTCAGAAGATACAATGGTCCCAGGGGCCAAGTAGAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396553.6
ENST00000444303.6
CDS-3UTR CCA 90 bp AAATTAGGAACAAGTATAGACAAGTGCTCAGCTCCCAGATCCCCAAGGAGAAGTAGGAGGGTGGAAGTCTaGAAGGCCCTCTTCCGGAGG +
Preference number: 4 (lower is better)
Translates to: KLGTSIDKCSAPRSPRRSRRVEV*KALFRR
Trigger: CCTCCGGAAGAGGGCCTTCCAGACTTCCACCCTCCT...ACTTCTCCTTGGGGATCTGGGAGCTGAGCACTTGTCTATACTTGTTCCTAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR CCA 90 bp AAATTAGGAACAAGTATAGACAAGTGCTCAGCTCCCAGATCCCCAAGGAGAAGTGTCTTCCTGGGGCAGTaGAGGAGGGTGGAAGTCTGG +
Preference number: 4 (lower is better)
Translates to: KLGTSIDKCSAPRSPRRSVFLGQ*RRVEVW
Trigger: CCAGACTTCCACCCTCCTCCACTGCCCCAGGAAGAC...ACTTCTCCTTGGGGATCTGGGAGCTGAGCACTTGTCTATACTTGTTCCTAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR CCA 90 bp TCAGAGGCATCCTCTTCACAGAGGAAAGTCCTAGTTCGGAATCTTGACCACTATAGGCTGTGCGGCTCCTaGTGCTCCAGCATCTTCTTG +
Preference number: 4 (lower is better)
Translates to: SEASSSQRKVLVRNLDHYRLCGS*CSSIFL
Trigger: CAAGAAGATGCTGGAGCACCAGGAGCCGCACAGCCT...ATAGTGGTCAAGATTCCGAACTAGGACTTTCCTCTGTGAAGAGGATGCCTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CCA 90 bp GTGAAGAAACCAAGACTCAGAATAGGAGTGGCTGTTTTCATGAGTACATTTGGCGTCTGCCGGCCCGCGTaGACATCCAGTGAGTCCACA +
Preference number: 4 (lower is better)
Translates to: VKKPRLRIGVAVFMSTFGVCRPA*TSSEST
Trigger: TGTGGACTCACTGGATGTCCACGCGGGCCGGCAGAC...GCCAAATGTACTCATGAAAACAGCCACTCCTATTCTGAGTCTTGGTTTCTTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
CDS-3UTR CCA 90 bp CTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATTGTCTGCCGGCCCGCGTaGACATCCAGTGAGTCCACA +
Preference number: 4 (lower is better)
Translates to: LISECHPDLSHICLSNIIVCRPA*TSSEST
Trigger: TGTGGACTCACTGGATGTCCACGCGGGCCGGCAGAC...AATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529834.5
ENST00000534047.5
CDS-3UTR CCA 90 bp CATCCGAGCAAAGTACTCTCCTCCCAGATAGTTTTCAGTTTTCAAATACAGGTCGTCTGCCGGCCCGCGTaGACATCCAGTGAGTCCACA +
Preference number: 4 (lower is better)
Translates to: HPSKVLSSQIVFSFQIQVVCRPA*TSSEST
Trigger: TGTGGACTCACTGGATGTCCACGCGGGCCGGCAGAC...GACCTGTATTTGAAAACTGAAAACTATCTGGGAGGAGAGTACTTTGCTCGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534047.5
CDS-3UTR CCA 90 bp TCAGAGGCATCCTCTTCACAGAGGAAAGTCCTAGTTCGGAATCTTGACCACTATGGTCACGCAGCTCACTaGCCCCCACAGGGTTGTATT +
Preference number: 4 (lower is better)
Translates to: SEASSSQRKVLVRNLDHYGHAAH*PPQGCI
Trigger: AATACAACCCTGTGGGGGCCAGTGAGCTGCGTGACC...ATAGTGGTCAAGATTCCGAACTAGGACTTTCCTCTGTGAAGAGGATGCCTCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CCA 90 bp TATAGACAAGTGCTCAGCTCCCAGATCCCCAAGGAGAAGTCACCATCTTGTTACCGTGGCTCTGAGTACTaGTACTTGCTCTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: YRQVLSSQIPKEKSPSCYRGSEY*YLLSSS
Trigger: GCTGGAGGAGAGCAAGTACCAGTACTCAGAGCCACG...GTAACAAGATGGTGACTTCTCCTTGGGGATCTGGGAGCTGAGCACTTGTCTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR CCA 90 bp AAATTAGGAACAAGTATAGACAAGTGCTCAGCTCCCAGATCCCCAAGGAGAAGTACCAGTAGGCCAGGTTaGGCCACTCCTCAGGACTGC +
Preference number: 4 (lower is better)
Translates to: KLGTSIDKCSAPRSPRRSTSRPG*ATPQDC
Trigger: GCAGTCCTGAGGAGTGGCCCAACCTGGCCTACTGGT...ACTTCTCCTTGGGGATCTGGGAGCTGAGCACTTGTCTATACTTGTTCCTAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR CCA 90 bp TTTTCAAATACAGGTCACGCAGCTCACTGGCCCCCACAGGGTTGTATTTGGAGTCCAGACGTCCGGGTTTaGGCTCTTGTCGGAAAACAT +
Preference number: 4 (lower is better)
Translates to: FSNTGHAAHWPPQGCIWSPDVRV*ALVGKH
Trigger: ATGTTTTCCGACAAGAGCCCAAACCCGGACGTCTGG...ACTCCAAATACAACCCTGTGGGGGCCAGTGAGCTGCGTGACCTGTATTTGAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000534047.5
CDS-3UTR CCA 90 bp ATTTCTTCAGAGGCATCCTCTTCACAGAGGAAAGTCCTAGTTCGGAATCTTGACAAGGCAGACACCAGGTaGGTGATGGAGCCGGCTTCC +
Preference number: 4 (lower is better)
Translates to: ISSEASSSQRKVLVRNLDKADTR*VMEPAS
Trigger: GGAAGCCGGCTCCATCACCCACCTGGTGTCTGCCTT...GTCAAGATTCCGAACTAGGACTTTCCTCTGTGAAGAGGATGCCTCTGAAGAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CCA 90 bp AAATTAGGAACAAGTATAGACAAGTGCTCAGCTCCCAGATCCCCAAGGAGAAGTAAGGCAGACACCAGGTaGGTGATGGAGCCGGCTTCC +
Preference number: 4 (lower is better)
Translates to: KLGTSIDKCSAPRSPRRSKADTR*VMEPAS
Trigger: GGAAGCCGGCTCCATCACCCACCTGGTGTCTGCCTT...ACTTCTCCTTGGGGATCTGGGAGCTGAGCACTTGTCTATACTTGTTCCTAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR CCA 90 bp AGGTCTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATGCAGCACGCTGTTCCTaGCGATCTCACACAGGTCGC +
Preference number: 4 (lower is better)
Translates to: RSHIGMPSGSEPHLSFEYAARCS*RSHTGR
Trigger: GCGACCTGTGTGAGATCGCCAGGAACAGCGTGCTGC...ATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAGACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529744.1
ENST00000534047.5
CDS-3UTR CCA 90 bp AGTTTTCAAATACAGGTCACGCAGCTCACTGGCCCCCACAGGGTTGTATTTGGACAAGCACAATCATGGTaGCTTTCCAGGGGGCTGAGT +
Preference number: 4 (lower is better)
Translates to: SFQIQVTQLTGPHRVVFGQAQSW*LSRGLS
Trigger: ACTCAGCCCCCTGGAAAGCCACCATGATTGTGCTTG...TCCAAATACAACCCTGTGGGGGCCAGTGAGCTGCGTGACCTGTATTTGAAAACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000533116.1
CDS-3UTR TCA 90 bp AAATTAGGAACAAGTATAGACAAGTGCTCAGCTCCCAGATCCCCAAGGAGAAGTCCAGTGAGTCCACAGTaGGGTCGTAGGGGTCCATGT +
Preference number: 4 (lower is better)
Translates to: KLGTSIDKCSAPRSPRRSPVSPQ*GRRGPC
Trigger: ACATGGACCCCTACGACCTCACTGTGGACTCACTGG...ACTTCTCCTTGGGGATCTGGGAGCTGAGCACTTGTCTATACTTGTTCCTAATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR TCA 90 bp ATTTCTTCAGAGGCATCCTCTTCACAGAGGAAAGTCCTAGTTCGGAATCTTGACCCAGTGAGTCCACAGTaGGGTCGTAGGGGTCCATGT +
Preference number: 4 (lower is better)
Translates to: ISSEASSSQRKVLVRNLDPVSPQ*GRRGPC
Trigger: ACATGGACCCCTACGACCTCACTGTGGACTCACTGG...GTCAAGATTCCGAACTAGGACTTTCCTCTGTGAAGAGGATGCCTCTGAAGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR TCA 90 bp AAATTAGGAACAAGTATAGACAAGTGCTCAGCTCCCAGATCCCCAAGGAGAAGTCCCGGGCAACCTCCTTaGCCATCCGAGCAAAGTACT +
Preference number: 4 (lower is better)
Translates to: KLGTSIDKCSAPRSPRRSPGQPP*PSEQST
Trigger: AGTACTTTGCTCGGATGGTCAAGGAGGTTGCCCGGG...ACTTCTCCTTGGGGATCTGGGAGCTGAGCACTTGTCTATACTTGTTCCTAATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR TCA 90 bp ATTTCTTCAGAGGCATCCTCTTCACAGAGGAAAGTCCTAGTTCGGAATCTTGACCCCGGGCAACCTCCTTaGCCATCCGAGCAAAGTACT +
Preference number: 4 (lower is better)
Translates to: ISSEASSSQRKVLVRNLDPGQPP*PSEQST
Trigger: AGTACTTTGCTCGGATGGTCAAGGAGGTTGCCCGGG...GTCAAGATTCCGAACTAGGACTTTCCTCTGTGAAGAGGATGCCTCTGAAGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR TCA 90 bp GTACTCTCCTCCCAGATAGTTTTCAGTTTTCAAATACAGGTCACGCAGCTCACTCCCGGGCAACCTCCTTaGCCATCCGAGCAAAGTACT +
Preference number: 4 (lower is better)
Translates to: VLSSQIVFSFQIQVTQLTPGQPP*PSEQST
Trigger: AGTACTTTGCTCGGATGGTCAAGGAGGTTGCCCGGG...AGTGAGCTGCGTGACCTGTATTTGAAAACTGAAAACTATCTGGGAGGAGAGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000533116.1
ENST00000534047.5
CDS-3UTR TCA 90 bp GTACTCTCCTCCCAGATAGTTTTCAGTTTTCAAATACAGGTCACGCAGCTCACTGGAGAGCCGTGGCTCTaGGTACTGGTACTTGCTCTC +
Preference number: 4 (lower is better)
Translates to: VLSSQIVFSFQIQVTQLTGEPWL*VLVLAL
Trigger: GAGAGCAAGTACCAGTACTCAGAGCCACGGCTCTCC...AGTGAGCTGCGTGACCTGTATTTGAAAACTGAAAACTATCTGGGAGGAGAGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000533116.1
ENST00000534047.5
CDS-3UTR TCA 90 bp CTACCAATTAGCCTACCTGGGCCAATGGAGAAAAGTATGGCAGAAAACCACATGAGACCTTGTGCTGGATaGACCAGTAGGCCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: LPISLPGPMEKSMAENHMRPCAG*TSRPGW
Trigger: CCAACCTGGCCTACTGGTTCATCCAGCACAAGGTCT...CATGTGGTTTTCTGCCATACTTTTCTCCATTGGCCCAGGTAGGCTAATTGGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR TCA 90 bp TCAGAGGCATCCTCTTCACAGAGGAAAGTCCTAGTTCGGAATCTTGACCACTATAGACCTTGTGCTGGATaGACCAGTAGGCCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: SEASSSQRKVLVRNLDHYRPCAG*TSRPGW
Trigger: CCAACCTGGCCTACTGGTTCATCCAGCACAAGGTCT...ATAGTGGTCAAGATTCCGAACTAGGACTTTCCTCTGTGAAGAGGATGCCTCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR TCA 90 bp CCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATGTTTCCGGGGCACCTGGATaGTCCAGCGCATGTTGGGAG +
Preference number: 4 (lower is better)
Translates to: PKEKSPSCYSEILTSEHVSGAPG*SSACWE
Trigger: CTCCCAACATGCGCTGGATCATCCAGGTGCCCCGGA...AACATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR TCA 90 bp ATCCTGGCCCCAACAGTTCAGGCACTGGCAGTTTCAAGAGAAATACTTGGAAAAATACCGGACTCTTCTTaGGGAGCAGCCCGTGGGAAA +
Preference number: 4 (lower is better)
Translates to: ILAPTVQALAVSREILGKIPDSS*GAARGK
Trigger: TTTCCCACGGGCTGCTCCTCAAGAAGAGTCCGGTAT...TTTTCCAAGTATTTCTCTTGAAACTGCCAGTGCCTGAACTGTTGGGGCCAGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR GCA 90 bp ATCCTGGCCCCAACAGTTCAGGCACTGGCAGTTTCAAGAGAAATACTTGGAAAAGCCAGGAGCCGGACTTaGTCATCCACTTCAGAGATG +
Preference number: 4 (lower is better)
Translates to: ILAPTVQALAVSREILGKARSRT*SSTSEM
Trigger: CATCTCTGAAGTGGATGAGCAAGTCCGGCTCCTGGC...TTTTCCAAGTATTTCTCTTGAAACTGCCAGTGCCTGAACTGTTGGGGCCAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR GCA 90 bp CTACCAATTAGCCTACCTGGGCCAATGGAGAAAAGTATGGCAGAAAACCACATGGGGACAGGGCATCTTTaGTGTCCTCTTCTCGGAGCA +
Preference number: 4 (lower is better)
Translates to: LPISLPGPMEKSMAENHMGTGHL*CPLLGA
Trigger: TGCTCCGAGAAGAGGACAGCAAAGATGCCCTGTCCC...CATGTGGTTTTCTGCCATACTTTTCTCCATTGGCCCAGGTAGGCTAATTGGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR GCA 90 bp TCAGAGGCATCCTCTTCACAGAGGAAAGTCCTAGTTCGGAATCTTGACCACTATTCCTTGGCTTCCTTTTaGCCGATGGGGCAGTCCTCT +
Preference number: 4 (lower is better)
Translates to: SEASSSQRKVLVRNLDHYSLASF*PMGQSS
Trigger: AGAGGACTGCCCCATCGGGCAAAAGGAAGCCAAGGA...ATAGTGGTCAAGATTCCGAACTAGGACTTTCCTCTGTGAAGAGGATGCCTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR GCA 90 bp ATTTCTTCAGAGGCATCCTCTTCACAGAGGAAAGTCCTAGTTCGGAATCTTGACTGCTGTGGCGGCATTTaGAGAGACAGGGACTGGGAC +
Preference number: 4 (lower is better)
Translates to: ISSEASSSQRKVLVRNLDCCGGI*RDRDWD
Trigger: GTCCCAGTCCCTGTCTCTGCAAATGCCGCCACAGCA...GTCAAGATTCCGAACTAGGACTTTCCTCTGTGAAGAGGATGCCTCTGAAGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000528723.5
ENST00000529507.5
CDS-3UTR GCA 90 bp ATCCTGGCCCCAACAGTTCAGGCACTGGCAGTTTCAAGAGAAATACTTGGAAAAGGGCCCTTCCAATCTTaGTGTGGCGGCATTTGCAGA +
Preference number: 4 (lower is better)
Translates to: ILAPTVQALAVSREILGKGPFQS*CGGICR
Trigger: TCTGCAAATGCCGCCACAGCAAGATTGGAAGGGCCC...TTTTCCAAGTATTTCTCTTGAAACTGCCAGTGCCTGAACTGTTGGGGCCAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000529507.5
CDS-3UTR GCA 90 bp CTACCAATTAGCCTACCTGGGCCAATGGAGAAAAGTATGGCAGAAAACCACATGGGGCCCTTCCAATCTTaGTGTGGCGGCATTTGCAGA +
Preference number: 4 (lower is better)
Translates to: LPISLPGPMEKSMAENHMGPFQS*CGGICR
Trigger: TCTGCAAATGCCGCCACAGCAAGATTGGAAGGGCCC...CATGTGGTTTTCTGCCATACTTTTCTCCATTGGCCCAGGTAGGCTAATTGGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000529507.5
CDS-3UTR GCA 90 bp TCCCAGATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTAGGCATGGCATAGGGTaGTGGCGTGGGCAGGGAAGT +
Preference number: 4 (lower is better)
Translates to: SQIPKEKSPSCYSEILTSRHGIG*WRGQGS
Trigger: ACTTCCCTGCCCACGCCAGCACCCTATGCCATGCCT...ACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGGGATCTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000528723.5
ENST00000529507.5
CDS-3UTR GCA 90 bp CTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATTAGGCATGGCATAGGGTaGTGGCGTGGGCAGGGAAGT +
Preference number: 4 (lower is better)
Translates to: LISECHPDLSHICLSNIIRHGIG*WRGQGS
Trigger: ACTTCCCTGCCCACGCCAGCACCCTATGCCATGCCT...AATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529834.5
ENST00000534047.5
CDS-3UTR GCA 90 bp CTACCAATTAGCCTACCTGGGCCAATGGAGAAAAGTATGGCAGAAAACCACATGGGCCAGACTCTTGGCTaGCTGCTCATAGTCCTCCAA +
Preference number: 4 (lower is better)
Translates to: LPISLPGPMEKSMAENHMGQTLG*LLIVLQ
Trigger: TTGGAGGACTATGAGCAGGCAGCCAAGAGTCTGGCC...CATGTGGTTTTCTGCCATACTTTTCTCCATTGGCCCAGGTAGGCTAATTGGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR GCA 90 bp TCAGAGGCATCCTCTTCACAGAGGAAAGTCCTAGTTCGGAATCTTGACCACTATGGCCAGACTCTTGGCTaGCTGCTCATAGTCCTCCAA +
Preference number: 4 (lower is better)
Translates to: SEASSSQRKVLVRNLDHYGQTLG*LLIVLQ
Trigger: TTGGAGGACTATGAGCAGGCAGCCAAGAGTCTGGCC...ATAGTGGTCAAGATTCCGAACTAGGACTTTCCTCTGTGAAGAGGATGCCTCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR GCA 90 bp AGTATAGACAAGTGCTCAGCTCCCAGATCCCCAAGGAGAAGTCACCATCTTGTTCATACACAAAGAGGATaGCCCCCTGCATGTGGACCA +
Preference number: 4 (lower is better)
Translates to: SIDKCSAPRSPRRSHHLVHTQRG*PPACGP
Trigger: TGGTCCACATGCAGGGGGGCATCCTCTTTGTGTATG...AACAAGATGGTGACTTCTCCTTGGGGATCTGGGAGCTGAGCACTTGTCTATACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR GCA 90 bp CTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATTAGGCCGTCAAACACCTaGCGCAGGGTGATCTTCCGG +
Preference number: 4 (lower is better)
Translates to: LISECHPDLSHICLSNIIRPSNT*RRVIFR
Trigger: CCGGAAGATCACCCTGCGGCAGGTGTTTGACGGCCT...AATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529834.5
ENST00000534047.5
CDS-3UTR GCA 90 bp CCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATGTTGCCACTCCTCAGGACTaGGGCCGTAGATGGAGAGCC +
Preference number: 4 (lower is better)
Translates to: PKEKSPSCYSEILTSEHVATPQD*GRRWRA
Trigger: GGCTCTCCATCTACGGCCGCAGTCCTGAGGAGTGGC...AACATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR GCA 90 bp TCCTGGCCCCAACAGTTCAGGCACTGGCAGTTTCAAGAGAAATACTTGGAAAATCACACAGGTCGCAGGTaGTCAGCTTCCACACTTGAG +
Preference number: 4 (lower is better)
Translates to: SWPQQFRHWQFQEKYLENHTGRR*SASTLE
Trigger: CTCAAGTGTGGAAGCTGAGCACCTGCGACCTGTGTG...ATTTTCCAAGTATTTCTCTTGAAACTGCCAGTGCCTGAACTGTTGGGGCCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR GCA 90 bp AGTATAGACAAGTGCTCAGCTCCCAGATCCCCAAGGAGAAGTCACCATCTTGTTGGTCTCATATCGGAATaGCATCCGGATCTGAGCCAC +
Preference number: 4 (lower is better)
Translates to: SIDKCSAPRSPRRSHHLVGLISE*HPDLSH
Trigger: GTGGCTCAGATCCGGATGGCATTCCGATATGAGACC...AACAAGATGGTGACTTCTCCTTGGGGATCTGGGAGCTGAGCACTTGTCTATACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR GCA 90 bp TCAGAGGCATCCTCTTCACAGAGGAAAGTCCTAGTTCGGAATCTTGACCACTATTTCAGCTTGGGAAACTaGCGCGGCATCTCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: SEASSSQRKVLVRNLDHYFSLGN*RGISAG
Trigger: ACCAGCTGAGATGCCGCGGCAGTTTCCCAAGCTGAA...ATAGTGGTCAAGATTCCGAACTAGGACTTTCCTCTGTGAAGAGGATGCCTCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529507.5
CDS-3UTR GCA 90 bp GACAGGAAGCTGAGCTCATTGCATAAGGTCTCATATCGGAATGCCATCCGGATCGGAACAAACTGTTGTTaGTTCTTGAGGAGCAGCCCG +
Preference number: 4 (lower is better)
Translates to: DRKLSSLHKVSYRNAIRIGTNCC*FLRSSP
Trigger: CGGGCTGCTCCTCAAGAAGCAACAACAGTTTGTTCC...GATCCGGATGGCATTCCGATATGAGACCTTATGCAATGAGCTCAGCTTCCTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529744.1
CDS-3UTR GCA 90 bp CCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATGTTGAGTCAGTGCGTGCGTaGAGCTGGCTGGGTCCTGTC +
Preference number: 4 (lower is better)
Translates to: PKEKSPSCYSEILTSEHVESVRA*SWLGPV
Trigger: GACAGGACCCAGCCAGCTGCACGCACGCACTGACTC...AACATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528723.5
CDS-3UTR CCA 90 bp AGTATAGACAAGTGCTCAGCTCCCAGATCCCCAAGGAGAAGTCACCATCTTGTTCAGAGATGTTCAGCTTaGGAAACTGCCGCGGCATCT +
Preference number: 4 (lower is better)
Translates to: SIDKCSAPRSPRRSHHLVQRCSA*ETAAAS
Trigger: AGATGCCGCGGCAGTTTCCCAAGCTGAACATCTCTG...AACAAGATGGTGACTTCTCCTTGGGGATCTGGGAGCTGAGCACTTGTCTATACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR CCA 90 bp CCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATGTTCATGGCATAGGGTGCTaGCGTGGGCAGGGAAGTGGC +
Preference number: 4 (lower is better)
Translates to: PKEKSPSCYSEILTSEHVHGIGC*RGQGSG
Trigger: GCCACTTCCCTGCCCACGCCAGCACCCTATGCCATG...AACATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CCA 90 bp CTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATTGCTGGAACTCAGGCATaGCATAGGGTGCTGGCGTGG +
Preference number: 4 (lower is better)
Translates to: LISECHPDLSHICLSNIIAGTQA*HRVLAW
Trigger: CCACGCCAGCACCCTATGCCATGCCTGAGTTCCAGC...AATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529834.5
ENST00000534047.5
CDS-3UTR CCA 90 bp TCCTGGCCCCAACAGTTCAGGCACTGGCAGTTTCAAGAGAAATACTTGGAAAATCCTTGGCCAGACTCTTaGCTGCCTGCTCATAGTCCT +
Preference number: 4 (lower is better)
Translates to: SWPQQFRHWQFQEKYLENPWPDS*LPAHSP
Trigger: AGGACTATGAGCAGGCAGCCAAGAGTCTGGCCAAGG...ATTTTCCAAGTATTTCTCTTGAAACTGCCAGTGCCTGAACTGTTGGGGCCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR CCA 90 bp TCAGAGGCATCCTCTTCACAGAGGAAAGTCCTAGTTCGGAATCTTGACCACTATCCTTGGCCAGACTCTTaGCTGCCTGCTCATAGTCCT +
Preference number: 4 (lower is better)
Translates to: SEASSSQRKVLVRNLDHYPWPDS*LPAHSP
Trigger: AGGACTATGAGCAGGCAGCCAAGAGTCTGGCCAAGG...ATAGTGGTCAAGATTCCGAACTAGGACTTTCCTCTGTGAAGAGGATGCCTCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CCA 90 bp CTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATTAGGAGGGTGGAAGTCTaGAAGGCCCTCTTCCGGAGG +
Preference number: 4 (lower is better)
Translates to: LISECHPDLSHICLSNIIRRVEV*KALFRR
Trigger: CCTCCGGAAGAGGGCCTTCCAGACTTCCACCCTCCT...AATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529834.5
CDS-3UTR CCA 90 bp GGTGAAGAAACCAAGACTCAGAATAGGAGTGGCTGTTTTCATGAGTACATTTGGGGCAGTGGAGGAGGGTaGAAGTCTGGAAGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: GEETKTQNRSGCFHEYIWGSGGG*KSGRPS
Trigger: AGAGGGCCTTCCAGACTTCCACCCTCCTCCACTGCC...CCAAATGTACTCATGAAAACAGCCACTCCTATTCTGAGTCTTGGTTTCTTCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
CDS-3UTR CCA 90 bp CTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATTGGCAGTGGAGGAGGGTaGAAGTCTGGAAGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: LISECHPDLSHICLSNIIGSGGG*KSGRPS
Trigger: AGAGGGCCTTCCAGACTTCCACCCTCCTCCACTGCC...AATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529834.5
CDS-3UTR CCA 90 bp GTGAAGAAACCAAGACTCAGAATAGGAGTGGCTGTTTTCATGAGTACATTTGGCGTCTTCCTGGGGCAGTaGAGGAGGGTGGAAGTCTGG +
Preference number: 4 (lower is better)
Translates to: VKKPRLRIGVAVFMSTFGVFLGQ*RRVEVW
Trigger: CCAGACTTCCACCCTCCTCCACTGCCCCAGGAAGAC...GCCAAATGTACTCATGAAAACAGCCACTCCTATTCTGAGTCTTGGTTTCTTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
CDS-3UTR CCA 90 bp GGTGAAGAAACCAAGACTCAGAATAGGAGTGGCTGTTTTCATGAGTACATTTGGGTCTTCCTGGGGCAGTaGAGGAGGGTGGAAGTCTGG +
Preference number: 4 (lower is better)
Translates to: GEETKTQNRSGCFHEYIWVFLGQ*RRVEVW
Trigger: CCAGACTTCCACCCTCCTCCACTGCCCCAGGAAGAC...CCAAATGTACTCATGAAAACAGCCACTCCTATTCTGAGTCTTGGTTTCTTCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
CDS-3UTR CCA 90 bp CAGATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGGTCTTCCTGGGGCAGTaGAGGAGGGTGGAAGTCTGG +
Preference number: 4 (lower is better)
Translates to: QIPKEKSPSCYSEILTSEVFLGQ*RRVEVW
Trigger: CCAGACTTCCACCCTCCTCCACTGCCCCAGGAAGAC...CTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGGGATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CCA 90 bp CTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATTGTCTTCCTGGGGCAGTaGAGGAGGGTGGAAGTCTGG +
Preference number: 4 (lower is better)
Translates to: LISECHPDLSHICLSNIIVFLGQ*RRVEVW
Trigger: CCAGACTTCCACCCTCCTCCACTGCCCCAGGAAGAC...AATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529834.5
CDS-3UTR CCA 90 bp TCAGAGGCATCCTCTTCACAGAGGAAAGTCCTAGTTCGGAATCTTGACCACTATCCAAGTAATCCAGGTTaGGGGGTGCATCATCCAGGC +
Preference number: 4 (lower is better)
Translates to: SEASSSQRKVLVRNLDHYPSNPG*GVHHPG
Trigger: GCCTGGATGATGCACCCCCCAACCTGGATTACTTGG...ATAGTGGTCAAGATTCCGAACTAGGACTTTCCTCTGTGAAGAGGATGCCTCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CCA 90 bp CTACCAATTAGCCTACCTGGGCCAATGGAGAAAAGTATGGCAGAAAACCACATGCCAAGTAATCCAGGTTaGGGGGTGCATCATCCAGGC +
Preference number: 4 (lower is better)
Translates to: LPISLPGPMEKSMAENHMPSNPG*GVHHPG
Trigger: GCCTGGATGATGCACCCCCCAACCTGGATTACTTGG...CATGTGGTTTTCTGCCATACTTTTCTCCATTGGCCCAGGTAGGCTAATTGGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR CCA 90 bp ATTTCTTCAGAGGCATCCTCTTCACAGAGGAAAGTCCTAGTTCGGAATCTTGACAGGCTGTGCGGCTCCTaGTGCTCCAGCATCTTCTTG +
Preference number: 4 (lower is better)
Translates to: ISSEASSSQRKVLVRNLDRLCGS*CSSIFL
Trigger: CAAGAAGATGCTGGAGCACCAGGAGCCGCACAGCCT...GTCAAGATTCCGAACTAGGACTTTCCTCTGTGAAGAGGATGCCTCTGAAGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CCA 90 bp ATCCTGGCCCCAACAGTTCAGGCACTGGCAGTTTCAAGAGAAATACTTGGAAAAATGCAGGCGGCCGCATaGATGTGTGTGTCCACCTTT +
Preference number: 4 (lower is better)
Translates to: ILAPTVQALAVSREILGKMQAAA*MCVSTF
Trigger: AAAGGTGGACACACACATCCATGCGGCCGCCTGCAT...TTTTCCAAGTATTTCTCTTGAAACTGCCAGTGCCTGAACTGTTGGGGCCAGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR CCA 90 bp CCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATGTTGTCTGCCGGCCCGCGTaGACATCCAGTGAGTCCACA +
Preference number: 4 (lower is better)
Translates to: PKEKSPSCYSEILTSEHVVCRPA*TSSEST
Trigger: TGTGGACTCACTGGATGTCCACGCGGGCCGGCAGAC...AACATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CCA 90 bp ATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATGTCTGCCGGCCCGCGTaGACATCCAGTGAGTCCACA +
Preference number: 4 (lower is better)
Translates to: IPKEKSPSCYSEILTSEHVCRPA*TSSEST
Trigger: TGTGGACTCACTGGATGTCCACGCGGGCCGGCAGAC...ATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CCA 90 bp GCTTTCTACTTGGCCCCTGGGACCATTGTATCTTCTGAAGTCATCATAGTAGATAACTTGTCAAAGCGGTaGAATGTCTGCCGGCCCGCG +
Preference number: 4 (lower is better)
Translates to: AFYLAPGTIVSSEVIIVDNLSKR*NVCRPA
Trigger: CGCGGGCCGGCAGACATTCCACCGCTTTGACAAGTT...ATCTACTATGATGACTTCAGAAGATACAATGGTCCCAGGGGCCAAGTAGAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396553.6
ENST00000444303.6
CDS-3UTR CCA 90 bp ATTTCTTCAGAGGCATCCTCTTCACAGAGGAAAGTCCTAGTTCGGAATCTTGACAACTTGTCAAAGCGGTaGAATGTCTGCCGGCCCGCG +
Preference number: 4 (lower is better)
Translates to: ISSEASSSQRKVLVRNLDNLSKR*NVCRPA
Trigger: CGCGGGCCGGCAGACATTCCACCGCTTTGACAAGTT...GTCAAGATTCCGAACTAGGACTTTCCTCTGTGAAGAGGATGCCTCTGAAGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CCA 90 bp AAATTAGGAACAAGTATAGACAAGTGCTCAGCTCCCAGATCCCCAAGGAGAAGTGGTCACGCAGCTCACTaGCCCCCACAGGGTTGTATT +
Preference number: 4 (lower is better)
Translates to: KLGTSIDKCSAPRSPRRSGHAAH*PPQGCI
Trigger: AATACAACCCTGTGGGGGCCAGTGAGCTGCGTGACC...ACTTCTCCTTGGGGATCTGGGAGCTGAGCACTTGTCTATACTTGTTCCTAATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR CCA 90 bp AATGAACAACTACCAATTAGCCTACCTGGGCCAATGGAGAAAAGTATGGCAGAAGACTGCGGCCGTAGATaGAGAGCCGTGGCTCTGAGT +
Preference number: 4 (lower is better)
Translates to: NEQLPISLPGPMEKSMAEDCGRR*RAVALS
Trigger: ACTCAGAGCCACGGCTCTCCATCTACGGCCGCAGTC...TTCTGCCATACTTTTCTCCATTGGCCCAGGTAGGCTAATTGGTAGTTGTTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR CCA 90 bp GTGAAGAAACCAAGACTCAGAATAGGAGTGGCTGTTTTCATGAGTACATTTGGCGACTGCGGCCGTAGATaGAGAGCCGTGGCTCTGAGT +
Preference number: 4 (lower is better)
Translates to: VKKPRLRIGVAVFMSTFGDCGRR*RAVALS
Trigger: ACTCAGAGCCACGGCTCTCCATCTACGGCCGCAGTC...GCCAAATGTACTCATGAAAACAGCCACTCCTATTCTGAGTCTTGGTTTCTTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
CDS-3UTR CCA 90 bp CTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATTGACTGCGGCCGTAGATaGAGAGCCGTGGCTCTGAGT +
Preference number: 4 (lower is better)
Translates to: LISECHPDLSHICLSNIIDCGRR*RAVALS
Trigger: ACTCAGAGCCACGGCTCTCCATCTACGGCCGCAGTC...AATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529834.5
ENST00000534047.5
CDS-3UTR CCA 90 bp TCCCAGATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTACCAGTAGGCCAGGTTaGGCCACTCCTCAGGACTGC +
Preference number: 4 (lower is better)
Translates to: SQIPKEKSPSCYSEILTSTSRPG*ATPQDC
Trigger: GCAGTCCTGAGGAGTGGCCCAACCTGGCCTACTGGT...ACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGGGATCTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CCA 90 bp CTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATTACCAGTAGGCCAGGTTaGGCCACTCCTCAGGACTGC +
Preference number: 4 (lower is better)
Translates to: LISECHPDLSHICLSNIITSRPG*ATPQDC
Trigger: GCAGTCCTGAGGAGTGGCCCAACCTGGCCTACTGGT...AATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529834.5
ENST00000534047.5
CDS-3UTR CCA 90 bp TCCCAGATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTAAGGCAGACACCAGGTaGGTGATGGAGCCGGCTTCC +
Preference number: 4 (lower is better)
Translates to: SQIPKEKSPSCYSEILTSKADTR*VMEPAS
Trigger: GGAAGCCGGCTCCATCACCCACCTGGTGTCTGCCTT...ACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGGGATCTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CCA 90 bp CTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATTAAGGCAGACACCAGGTaGGTGATGGAGCCGGCTTCC +
Preference number: 4 (lower is better)
Translates to: LISECHPDLSHICLSNIIKADTR*VMEPAS
Trigger: GGAAGCCGGCTCCATCACCCACCTGGTGTCTGCCTT...AATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529744.1
ENST00000529834.5
ENST00000534047.5
CDS-3UTR CCA 90 bp GTGAAGAAACCAAGACTCAGAATAGGAGTGGCTGTTTTCATGAGTACATTTGGCGCAGCACGCTGTTCCTaGCGATCTCACACAGGTCGC +
Preference number: 4 (lower is better)
Translates to: VKKPRLRIGVAVFMSTFGAARCS*RSHTGR
Trigger: GCGACCTGTGTGAGATCGCCAGGAACAGCGTGCTGC...GCCAAATGTACTCATGAAAACAGCCACTCCTATTCTGAGTCTTGGTTTCTTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
CDS-3UTR CCA 90 bp CAGATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGGCAGCACGCTGTTCCTaGCGATCTCACACAGGTCGC +
Preference number: 4 (lower is better)
Translates to: QIPKEKSPSCYSEILTSEAARCS*RSHTGR
Trigger: GCGACCTGTGTGAGATCGCCAGGAACAGCGTGCTGC...CTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGGGATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CCA 90 bp AATGAACAACTACCAATTAGCCTACCTGGGCCAATGGAGAAAAGTATGGCAGAACCGCGGCATCTCAGCTaGTACTTGGGGTCAGCTGTC +
Preference number: 4 (lower is better)
Translates to: NEQLPISLPGPMEKSMAEPRHLS*YLGSAV
Trigger: GACAGCTGACCCCAAGTACCAGCTGAGATGCCGCGG...TTCTGCCATACTTTTCTCCATTGGCCCAGGTAGGCTAATTGGTAGTTGTTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529507.5
CDS-3UTR CCA 90 bp CTTGACCATCCGAGCAAAGTACTCTCCTCCCAGATAGTTTTCAGTTTTCAAATAAGGGCTGCTGTCTGCTaGCGGCACTGGAGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: LDHPSKVLSSQIVFSFQIRAAVC*RHWSRS
Trigger: GCTTCTGCTCCAGTGCCGCCAGCAGACAGCAGCCCT...TATTTGAAAACTGAAAACTATCTGGGAGGAGAGTACTTTGCTCGGATGGTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533116.1
CDS-3UTR TCA 90 bp GTGAAGAAACCAAGACTCAGAATAGGAGTGGCTGTTTTCATGAGTACATTTGGCCCAGTGAGTCCACAGTaGGGTCGTAGGGGTCCATGT +
Preference number: 4 (lower is better)
Translates to: VKKPRLRIGVAVFMSTFGPVSPQ*GRRGPC
Trigger: ACATGGACCCCTACGACCTCACTGTGGACTCACTGG...GCCAAATGTACTCATGAAAACAGCCACTCCTATTCTGAGTCTTGGTTTCTTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
CDS-3UTR TCA 90 bp CTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATTCCAGTGAGTCCACAGTaGGGTCGTAGGGGTCCATGT +
Preference number: 4 (lower is better)
Translates to: LISECHPDLSHICLSNIIPVSPQ*GRRGPC
Trigger: ACATGGACCCCTACGACCTCACTGTGGACTCACTGG...AATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529834.5
ENST00000534047.5
CDS-3UTR TCA 90 bp TCCCAGATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTCGCGTGGACATCCAGTaGGTCCACAGTGAGGTCGTA +
Preference number: 4 (lower is better)
Translates to: SQIPKEKSPSCYSEILTSRVDIQ*VHSEVV
Trigger: TACGACCTCACTGTGGACTCACTGGATGTCCACGCG...ACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGGGATCTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR TCA 90 bp CTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATTCGCGTGGACATCCAGTaGGTCCACAGTGAGGTCGTA +
Preference number: 4 (lower is better)
Translates to: LISECHPDLSHICLSNIIRVDIQ*VHSEVV
Trigger: TACGACCTCACTGTGGACTCACTGGATGTCCACGCG...AATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529834.5
ENST00000534047.5
CDS-3UTR TCA 90 bp CAGATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCCCGGGCAACCTCCTTaGCCATCCGAGCAAAGTACT +
Preference number: 4 (lower is better)
Translates to: QIPKEKSPSCYSEILTSEPGQPP*PSEQST
Trigger: AGTACTTTGCTCGGATGGTCAAGGAGGTTGCCCGGG...CTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGGGATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR TCA 90 bp CTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATTCCCGGGCAACCTCCTTaGCCATCCGAGCAAAGTACT +
Preference number: 4 (lower is better)
Translates to: LISECHPDLSHICLSNIIPGQPP*PSEQST
Trigger: AGTACTTTGCTCGGATGGTCAAGGAGGTTGCCCGGG...AATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529834.5
ENST00000534047.5
CDS-3UTR TCA 90 bp CAGATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGGGAGAGCCGTGGCTCTaGGTACTGGTACTTGCTCTC +
Preference number: 4 (lower is better)
Translates to: QIPKEKSPSCYSEILTSEGEPWL*VLVLAL
Trigger: GAGAGCAAGTACCAGTACTCAGAGCCACGGCTCTCC...CTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGGGATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR TCA 90 bp CTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATTGGAGAGCCGTGGCTCTaGGTACTGGTACTTGCTCTC +
Preference number: 4 (lower is better)
Translates to: LISECHPDLSHICLSNIIGEPWL*VLVLAL
Trigger: GAGAGCAAGTACCAGTACTCAGAGCCACGGCTCTCC...AATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529834.5
ENST00000534047.5
CDS-3UTR TCA 90 bp CATCCGAGCAAAGTACTCTCCTCCCAGATAGTTTTCAGTTTTCAAATACAGGTCGGAGAGCCGTGGCTCTaGGTACTGGTACTTGCTCTC +
Preference number: 4 (lower is better)
Translates to: HPSKVLSSQIVFSFQIQVGEPWL*VLVLAL
Trigger: GAGAGCAAGTACCAGTACTCAGAGCCACGGCTCTCC...GACCTGTATTTGAAAACTGAAAACTATCTGGGAGGAGAGTACTTTGCTCGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000533116.1
ENST00000534047.5
CDS-3UTR TCA 90 bp TATAGACAAGTGCTCAGCTCCCAGATCCCCAAGGAGAAGTCACCATCTTGTTACAAATGTTGTCAGCAGTaGGGAAGGCAGACACCAGGT +
Preference number: 4 (lower is better)
Translates to: YRQVLSSQIPKEKSPSCYKCCQQ*GRQTPG
Trigger: ACCTGGTGTCTGCCTTCCTCACTGCTGACAACATTT...GTAACAAGATGGTGACTTCTCCTTGGGGATCTGGGAGCTGAGCACTTGTCTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR TCA 90 bp AGTATAGACAAGTGCTCAGCTCCCAGATCCCCAAGGAGAAGTCACCATCTTGTTAAATGTTGTCAGCAGTaGGGAAGGCAGACACCAGGT +
Preference number: 4 (lower is better)
Translates to: SIDKCSAPRSPRRSHHLVKCCQQ*GRQTPG
Trigger: ACCTGGTGTCTGCCTTCCTCACTGCTGACAACATTT...AACAAGATGGTGACTTCTCCTTGGGGATCTGGGAGCTGAGCACTTGTCTATACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR TCA 90 bp AAATTAGGAACAAGTATAGACAAGTGCTCAGCTCCCAGATCCCCAAGGAGAAGTCACTTTGACAGCCCCTaGGCATCACTCACTCCCTTC +
Preference number: 4 (lower is better)
Translates to: KLGTSIDKCSAPRSPRRSHFDSP*ASLTPF
Trigger: GAAGGGAGTGAGTGATGCTCAGGGGCTGTCAAAGTG...ACTTCTCCTTGGGGATCTGGGAGCTGAGCACTTGTCTATACTTGTTCCTAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
CDS-3UTR TCA 90 bp CATTGCATAAGGTCTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTACTGTTGTTGCTTCTTaGGGAGCAGCCCGTGGGAAA +
Preference number: 4 (lower is better)
Translates to: HCIRSHIGMPSGSEPHLSTVVAS*GAARGK
Trigger: TTTCCCACGGGCTGCTCCTCAAGAAGCAACAACAGT...AGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAGACCTTATGCAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529744.1
CDS-3UTR TCA 90 bp TTTCAGTTTTCAAATACAGGTCACGCAGCTCACTGGCCCCCACAGGGTTGTATTTTCTCTGAGGCCGCATaGCCTCTCAGTCAGATAGAA +
Preference number: 4 (lower is better)
Translates to: FQFSNTGHAAHWPPQGCIFSEAA*PLSQIE
Trigger: TTCTATCTGACTGAGAGGTCATGCGGCCTCAGAGAA...AATACAACCCTGTGGGGGCCAGTGAGCTGCGTGACCTGTATTTGAAAACTGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000533116.1
CDS-3UTR GCA 90 bp ATTTCTTCAGAGGCATCCTCTTCACAGAGGAAAGTCCTAGTTCGGAATCTTGACGCCAGGAGCCGGACTTaGTCATCCACTTCAGAGATG +
Preference number: 4 (lower is better)
Translates to: ISSEASSSQRKVLVRNLDARSRT*SSTSEM
Trigger: CATCTCTGAAGTGGATGAGCAAGTCCGGCTCCTGGC...GTCAAGATTCCGAACTAGGACTTTCCTCTGTGAAGAGGATGCCTCTGAAGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR GCA 90 bp ATTTCTTCAGAGGCATCCTCTTCACAGAGGAAAGTCCTAGTTCGGAATCTTGACTCCTTGGCTTCCTTTTaGCCGATGGGGCAGTCCTCT +
Preference number: 4 (lower is better)
Translates to: ISSEASSSQRKVLVRNLDSLASF*PMGQSS
Trigger: AGAGGACTGCCCCATCGGGCAAAAGGAAGCCAAGGA...GTCAAGATTCCGAACTAGGACTTTCCTCTGTGAAGAGGATGCCTCTGAAGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR GCA 90 bp CTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATTTGCTGTGGCGGCATTTaGAGAGACAGGGACTGGGAC +
Preference number: 4 (lower is better)
Translates to: LISECHPDLSHICLSNIICCGGI*RDRDWD
Trigger: GTCCCAGTCCCTGTCTCTGCAAATGCCGCCACAGCA...AATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529834.5
ENST00000534047.5
CDS-3UTR GCA 90 bp GTACTCTCCTCCCAGATAGTTTTCAGTTTTCAAATACAGGTCACGCAGCTCACTGGGCCCTTCCAATCTTaGTGTGGCGGCATTTGCAGA +
Preference number: 4 (lower is better)
Translates to: VLSSQIVFSFQIQVTQLTGPFQS*CGGICR
Trigger: TCTGCAAATGCCGCCACAGCAAGATTGGAAGGGCCC...AGTGAGCTGCGTGACCTGTATTTGAAAACTGAAAACTATCTGGGAGGAGAGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534047.5
CDS-3UTR GCA 90 bp CTACCAATTAGCCTACCTGGGCCAATGGAGAAAAGTATGGCAGAAAACCACATGCATACACAAAGAGGATaGCCCCCTGCATGTGGACCA +
Preference number: 4 (lower is better)
Translates to: LPISLPGPMEKSMAENHMHTQRG*PPACGP
Trigger: TGGTCCACATGCAGGGGGGCATCCTCTTTGTGTATG...CATGTGGTTTTCTGCCATACTTTTCTCCATTGGCCCAGGTAGGCTAATTGGTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR GCA 90 bp TCAGAGGCATCCTCTTCACAGAGGAAAGTCCTAGTTCGGAATCTTGACCACTATCTGTGCGGCTCCTGGTaGTCCAGCATCTTCTTGTTA +
Preference number: 4 (lower is better)
Translates to: SEASSSQRKVLVRNLDHYLCGSW*SSIFLL
Trigger: TAACAAGAAGATGCTGGAGCACCAGGAGCCGCACAG...ATAGTGGTCAAGATTCCGAACTAGGACTTTCCTCTGTGAAGAGGATGCCTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR GCA 90 bp TCAGAGGCATCCTCTTCACAGAGGAAAGTCCTAGTTCGGAATCTTGACCACTATGATGCTTTTGGTTCATaGAGGCGGCCGCATGGATGT +
Preference number: 4 (lower is better)
Translates to: SEASSSQRKVLVRNLDHYDAFGS*RRPHGC
Trigger: ACATCCATGCGGCCGCCTGCATGAACCAAAAGCATC...ATAGTGGTCAAGATTCCGAACTAGGACTTTCCTCTGTGAAGAGGATGCCTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR GCA 90 bp AGTATAGACAAGTGCTCAGCTCCCAGATCCCCAAGGAGAAGTCACCATCTTGTTTCCGTCTGGTATGTGTaGTTGATGAAGCGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: SIDKCSAPRSPRRSHHLVSVWYV*LMKRSR
Trigger: TCTGCTGCGCTTCATCAAGCACACATACCAGACGGA...AACAAGATGGTGACTTCTCCTTGGGGATCTGGGAGCTGAGCACTTGTCTATACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR GCA 90 bp TATAGACAAGTGCTCAGCTCCCAGATCCCCAAGGAGAAGTCACCATCTTGTTACTCCGTCTGGTATGTGTaGTTGATGAAGCGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: YRQVLSSQIPKEKSPSCYSVWYV*LMKRSR
Trigger: TCTGCTGCGCTTCATCAAGCACACATACCAGACGGA...GTAACAAGATGGTGACTTCTCCTTGGGGATCTGGGAGCTGAGCACTTGTCTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR GCA 90 bp CCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATGTTAGGCCGTCAAACACCTaGCGCAGGGTGATCTTCCGG +
Preference number: 4 (lower is better)
Translates to: PKEKSPSCYSEILTSEHVRPSNT*RRVIFR
Trigger: CCGGAAGATCACCCTGCGGCAGGTGTTTGACGGCCT...AACATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR GCA 90 bp GAAGAAACCAAGACTCAGAATAGGAGTGGCTGTTTTCATGAGTACATTTGGCTTAGGCCGTCAAACACCTaGCGCAGGGTGATCTTCCGG +
Preference number: 4 (lower is better)
Translates to: EETKTQNRSGCFHEYIWLRPSNT*RRVIFR
Trigger: CCGGAAGATCACCCTGCGGCAGGTGTTTGACGGCCT...AAGCCAAATGTACTCATGAAAACAGCCACTCCTATTCTGAGTCTTGGTTTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
CDS-3UTR GCA 90 bp AGGTCTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCACACAGGTCGCAGGTaGTCAGCTTCCACACTTGAG +
Preference number: 4 (lower is better)
Translates to: RSHIGMPSGSEPHLSFEYHTGRR*SASTLE
Trigger: CTCAAGTGTGGAAGCTGAGCACCTGCGACCTGTGTG...ATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAGACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529744.1
ENST00000534047.5
CDS-3UTR GCA 90 bp TCCTGGCCCCAACAGTTCAGGCACTGGCAGTTTCAAGAGAAATACTTGGAAAATGGTCTCATATCGGAATaGCATCCGGATCTGAGCCAC +
Preference number: 4 (lower is better)
Translates to: SWPQQFRHWQFQEKYLENGLISE*HPDLSH
Trigger: GTGGCTCAGATCCGGATGGCATTCCGATATGAGACC...ATTTTCCAAGTATTTCTCTTGAAACTGCCAGTGCCTGAACTGTTGGGGCCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR GCA 90 bp GTGAAGAAACCAAGACTCAGAATAGGAGTGGCTGTTTTCATGAGTACATTTGGCTTCAGCTTGGGAAACTaGCGCGGCATCTCAGAGCCG +
Preference number: 4 (lower is better)
Translates to: VKKPRLRIGVAVFMSTFGFSLGN*RGISEP
Trigger: CGGCTCTGAGATGCCGCGGCAGTTTCCCAAGCTGAA...GCCAAATGTACTCATGAAAACAGCCACTCCTATTCTGAGTCTTGGTTTCTTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396553.6
CDS-3UTR GCA 90 bp CTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATTTTCAGCTTGGGAAACTaGCGCGGCATCTCAGAGCCG +
Preference number: 4 (lower is better)
Translates to: LISECHPDLSHICLSNIIFSLGN*RGISEP
Trigger: CGGCTCTGAGATGCCGCGGCAGTTTCCCAAGCTGAA...AATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529834.5
CDS-3UTR GCA 90 bp TCCTGGCCCCAACAGTTCAGGCACTGGCAGTTTCAAGAGAAATACTTGGAAAATCTTGCTCCCTGTAGTTaGAGCAACCCGCAAGCATTG +
Preference number: 4 (lower is better)
Translates to: SWPQQFRHWQFQEKYLENLAPCS*SNPQAL
Trigger: CAATGCTTGCGGGTTGCTGCAACTACAGGGAGCAAG...ATTTTCCAAGTATTTCTCTTGAAACTGCCAGTGCCTGAACTGTTGGGGCCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444303.6
CDS-3UTR GCA 90 bp CAGATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGTTCAGCTTGGGAAACTaGCGCGGCATCTCAGCCGAC +
Preference number: 4 (lower is better)
Translates to: QIPKEKSPSCYSEILTSEFSLGN*RGISAD
Trigger: GTCGGCTGAGATGCCGCGGCAGTTTCCCAAGCTGAA...CTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGGGATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444303.6
CDS-3UTR CCA 90 bp CAGATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGGATGGGGCAGTCCTCTaGGACAGTGAACAGGGACAG +
Preference number: 4 (lower is better)
Translates to: QIPKEKSPSCYSEILTSEDGAVL*DSEQGQ
Trigger: CTGTCCCTGTTCACTGTCCCAGAGGACTGCCCCATC...CTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGGGATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CCA 90 bp CTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATTGATGGGGCAGTCCTCTaGGACAGTGAACAGGGACAG +
Preference number: 4 (lower is better)
Translates to: LISECHPDLSHICLSNIIDGAVL*DSEQGQ
Trigger: CTGTCCCTGTTCACTGTCCCAGAGGACTGCCCCATC...AATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529834.5
ENST00000534047.5
CDS-3UTR CCA 90 bp CTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATTCTTCCTTTTGCCCGATaGGGCAGTCCTCTGGGACAG +
Preference number: 4 (lower is better)
Translates to: LISECHPDLSHICLSNIILPFAR*GSPLGQ
Trigger: CTGTCCCAGAGGACTGCCCCATCGGGCAAAAGGAAG...AATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529834.5
ENST00000534047.5
CDS-3UTR CCA 90 bp CAGATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGGCAGCTCCCTCTCCTTaGCTTCCTTTTGCCCGATGG +
Preference number: 4 (lower is better)
Translates to: QIPKEKSPSCYSEILTSEAAPSP*LPFARW
Trigger: CCATCGGGCAAAAGGAAGCCAAGGAGAGGGAGCTGC...CTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGGGATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CCA 90 bp CTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATTGCAGCTCCCTCTCCTTaGCTTCCTTTTGCCCGATGG +
Preference number: 4 (lower is better)
Translates to: LISECHPDLSHICLSNIIAAPSP*LPFARW
Trigger: CCATCGGGCAAAAGGAAGCCAAGGAGAGGGAGCTGC...AATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529834.5
ENST00000534047.5
CDS-3UTR CCA 90 bp CCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATGTTGCTGGAACTCAGGCATaGCATAGGGTGCTGGCGTGG +
Preference number: 4 (lower is better)
Translates to: PKEKSPSCYSEILTSEHVAGTQA*HRVLAW
Trigger: CCACGCCAGCACCCTATGCCATGCCTGAGTTCCAGC...AACATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CCA 90 bp GCTTTCTACTTGGCCCCTGGGACCATTGTATCTTCTGAAGTCATCATAGTAGATGGATCATTAGGGCCTTaGCCAGACTCTTGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: AFYLAPGTIVSSEVIIVDGSLGP*PDSWLP
Trigger: AGGCAGCCAAGAGTCTGGCCAAGGCCCTAATGATCC...ATCTACTATGATGACTTCAGAAGATACAATGGTCCCAGGGGCCAAGTAGAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396553.6
ENST00000444303.6
CDS-3UTR CCA 90 bp AAGACTGCATTTATACTTCCATATGCTGAATTGACCAGTGGAGGGGACAGGCATGGATCATTAGGGCCTTaGCCAGACTCTTGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: KTAFILPYAELTSGGDRHGSLGP*PDSWLP
Trigger: AGGCAGCCAAGAGTCTGGCCAAGGCCCTAATGATCC...ATGCCTGTCCCCTCCACTGGTCAATTCAGCATATGGAAGTATAAATGCAGTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444303.6
CDS-3UTR CCA 90 bp ATTTCTTCAGAGGCATCCTCTTCACAGAGGAAAGTCCTAGTTCGGAATCTTGACGGATCATTAGGGCCTTaGCCAGACTCTTGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: ISSEASSSQRKVLVRNLDGSLGP*PDSWLP
Trigger: AGGCAGCCAAGAGTCTGGCCAAGGCCCTAATGATCC...GTCAAGATTCCGAACTAGGACTTTCCTCTGTGAAGAGGATGCCTCTGAAGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CCA 90 bp ATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATAGGAGGGTGGAAGTCTaGAAGGCCCTCTTCCGGAGG +
Preference number: 4 (lower is better)
Translates to: IPKEKSPSCYSEILTSEHRRVEV*KALFRR
Trigger: CCTCCGGAAGAGGGCCTTCCAGACTTCCACCCTCCT...ATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CCA 90 bp GCACCTACTACATACCAGGCACTAGTAACACAGATAAAGAGTACACTGATAAAGGGCAGTGGAGGAGGGTaGAAGTCTGGAAGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: APTTYQALVTQIKSTLIKGSGGG*KSGRPS
Trigger: AGAGGGCCTTCCAGACTTCCACCCTCCTCCACTGCC...CTTTATCAGTGTACTCTTTATCTGTGTTACTAGTGCCTGGTATGTAGTAGGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396553.6
ENST00000444303.6
CDS-3UTR CCA 90 bp CCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATGTTGGCAGTGGAGGAGGGTaGAAGTCTGGAAGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: PKEKSPSCYSEILTSEHVGSGGG*KSGRPS
Trigger: AGAGGGCCTTCCAGACTTCCACCCTCCTCCACTGCC...AACATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CCA 90 bp GCTTTCTACTTGGCCCCTGGGACCATTGTATCTTCTGAAGTCATCATAGTAGATCCAAGTAATCCAGGTTaGGGGGTGCATCATCCAGGC +
Preference number: 4 (lower is better)
Translates to: AFYLAPGTIVSSEVIIVDPSNPG*GVHHPG
Trigger: GCCTGGATGATGCACCCCCCAACCTGGATTACTTGG...ATCTACTATGATGACTTCAGAAGATACAATGGTCCCAGGGGCCAAGTAGAAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396553.6
ENST00000444303.6
CDS-3UTR CCA 90 bp TCCCAGATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTAGGCTGTGCGGCTCCTaGTGCTCCAGCATCTTCTTG +
Preference number: 4 (lower is better)
Translates to: SQIPKEKSPSCYSEILTSRLCGS*CSSIFL
Trigger: CAAGAAGATGCTGGAGCACCAGGAGCCGCACAGCCT...ACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGGGATCTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CCA 90 bp CTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATTAGGCTGTGCGGCTCCTaGTGCTCCAGCATCTTCTTG +
Preference number: 4 (lower is better)
Translates to: LISECHPDLSHICLSNIIRLCGS*CSSIFL
Trigger: CAAGAAGATGCTGGAGCACCAGGAGCCGCACAGCCT...AATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529834.5
ENST00000534047.5
CDS-3UTR CCA 90 bp CTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATTAACTTGTCAAAGCGGTaGAATGTCTGCCGGCCCGCG +
Preference number: 4 (lower is better)
Translates to: LISECHPDLSHICLSNIINLSKR*NVCRPA
Trigger: CGCGGGCCGGCAGACATTCCACCGCTTTGACAAGTT...AATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529834.5
ENST00000534047.5
CDS-3UTR CCA 90 bp GGTGAAGAAACCAAGACTCAGAATAGGAGTGGCTGTTTTCATGAGTACATTTGGGGTCACGCAGCTCACTaGCCCCCACAGGGTTGTATT +
Preference number: 4 (lower is better)
Translates to: GEETKTQNRSGCFHEYIWGHAAH*PPQGCI
Trigger: AATACAACCCTGTGGGGGCCAGTGAGCTGCGTGACC...CCAAATGTACTCATGAAAACAGCCACTCCTATTCTGAGTCTTGGTTTCTTCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
CDS-3UTR CCA 90 bp GTGAAGAAACCAAGACTCAGAATAGGAGTGGCTGTTTTCATGAGTACATTTGGCGGTCACGCAGCTCACTaGCCCCCACAGGGTTGTATT +
Preference number: 4 (lower is better)
Translates to: VKKPRLRIGVAVFMSTFGGHAAH*PPQGCI
Trigger: AATACAACCCTGTGGGGGCCAGTGAGCTGCGTGACC...GCCAAATGTACTCATGAAAACAGCCACTCCTATTCTGAGTCTTGGTTTCTTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
CDS-3UTR CCA 90 bp CTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATTGGTCACGCAGCTCACTaGCCCCCACAGGGTTGTATT +
Preference number: 4 (lower is better)
Translates to: LISECHPDLSHICLSNIIGHAAH*PPQGCI
Trigger: AATACAACCCTGTGGGGGCCAGTGAGCTGCGTGACC...AATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529834.5
ENST00000534047.5
CDS-3UTR CCA 90 bp CCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATGTTGACTGCGGCCGTAGATaGAGAGCCGTGGCTCTGAGT +
Preference number: 4 (lower is better)
Translates to: PKEKSPSCYSEILTSEHVDCGRR*RAVALS
Trigger: ACTCAGAGCCACGGCTCTCCATCTACGGCCGCAGTC...AACATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CCA 90 bp CTTGACCATCCGAGCAAAGTACTCTCCTCCCAGATAGTTTTCAGTTTTCAAATAGACTGCGGCCGTAGATaGAGAGCCGTGGCTCTGAGT +
Preference number: 4 (lower is better)
Translates to: LDHPSKVLSSQIVFSFQIDCGRR*RAVALS
Trigger: ACTCAGAGCCACGGCTCTCCATCTACGGCCGCAGTC...TATTTGAAAACTGAAAACTATCTGGGAGGAGAGTACTTTGCTCGGATGGTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534047.5
CDS-3UTR CCA 90 bp CCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATGTTACCAGTAGGCCAGGTTaGGCCACTCCTCAGGACTGC +
Preference number: 4 (lower is better)
Translates to: PKEKSPSCYSEILTSEHVTSRPG*ATPQDC
Trigger: GCAGTCCTGAGGAGTGGCCCAACCTGGCCTACTGGT...AACATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CCA 90 bp CTACCAATTAGCCTACCTGGGCCAATGGAGAAAAGTATGGCAGAAAACCACATGCCAGACGTCCGGGTTTaGGCTCTTGTCGGAAAACAT +
Preference number: 4 (lower is better)
Translates to: LPISLPGPMEKSMAENHMPDVRV*ALVGKH
Trigger: ATGTTTTCCGACAAGAGCCCAAACCCGGACGTCTGG...CATGTGGTTTTCTGCCATACTTTTCTCCATTGGCCCAGGTAGGCTAATTGGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR CCA 90 bp AATGAACAACTACCAATTAGCCTACCTGGGCCAATGGAGAAAAGTATGGCAGAAGTGGGTTCTGCTCACTaGTCCAGACGTCCGGGTTTG +
Preference number: 4 (lower is better)
Translates to: NEQLPISLPGPMEKSMAEVGSAH*SRRPGL
Trigger: CAAACCCGGACGTCTGGACCAGTGAGCAGAACCCAC...TTCTGCCATACTTTTCTCCATTGGCCCAGGTAGGCTAATTGGTAGTTGTTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR CCA 90 bp CAGATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGGTGGGTTCTGCTCACTaGTCCAGACGTCCGGGTTTG +
Preference number: 4 (lower is better)
Translates to: QIPKEKSPSCYSEILTSEVGSAH*SRRPGL
Trigger: CAAACCCGGACGTCTGGACCAGTGAGCAGAACCCAC...CTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGGGATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CCA 90 bp CTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATTGTGGGTTCTGCTCACTaGTCCAGACGTCCGGGTTTG +
Preference number: 4 (lower is better)
Translates to: LISECHPDLSHICLSNIIVGSAH*SRRPGL
Trigger: CAAACCCGGACGTCTGGACCAGTGAGCAGAACCCAC...AATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529834.5
ENST00000534047.5
CDS-3UTR CCA 90 bp TCAGAGGCATCCTCTTCACAGAGGAAAGTCCTAGTTCGGAATCTTGACCACTATGTAGTAGCTGTAGGGTaGGTTCTGCTCACTGGTCCA +
Preference number: 4 (lower is better)
Translates to: SEASSSQRKVLVRNLDHYVVAVG*VLLTGP
Trigger: TGGACCAGTGAGCAGAACCCACCCTACAGCTACTAC...ATAGTGGTCAAGATTCCGAACTAGGACTTTCCTCTGTGAAGAGGATGCCTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CCA 90 bp CTTGACCATCCGAGCAAAGTACTCTCCTCCCAGATAGTTTTCAGTTTTCAAATAAAGGCAGACACCAGGTaGGTGATGGAGCCGGCTTCC +
Preference number: 4 (lower is better)
Translates to: LDHPSKVLSSQIVFSFQIKADTR*VMEPAS
Trigger: GGAAGCCGGCTCCATCACCCACCTGGTGTCTGCCTT...TATTTGAAAACTGAAAACTATCTGGGAGGAGAGTACTTTGCTCGGATGGTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534047.5
CDS-3UTR CCA 90 bp ATCCTGGCCCCAACAGTTCAGGCACTGGCAGTTTCAAGAGAAATACTTGGAAAATTGAGGAGCAGCCCGTaGGAAATGTTGTCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: ILAPTVQALAVSREILGKLRSSP*EMLSAV
Trigger: CACTGCTGACAACATTTCCCACGGGCTGCTCCTCAA...TTTTCCAAGTATTTCTCTTGAAACTGCCAGTGCCTGAACTGTTGGGGCCAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR CCA 90 bp GAAGAAACCAAGACTCAGAATAGGAGTGGCTGTTTTCATGAGTACATTTGGCTTGCAGCACGCTGTTCCTaGCGATCTCACACAGGTCGC +
Preference number: 4 (lower is better)
Translates to: EETKTQNRSGCFHEYIWLAARCS*RSHTGR
Trigger: GCGACCTGTGTGAGATCGCCAGGAACAGCGTGCTGC...AAGCCAAATGTACTCATGAAAACAGCCACTCCTATTCTGAGTCTTGGTTTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
CDS-3UTR CCA 90 bp CCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATGTTGCAGCACGCTGTTCCTaGCGATCTCACACAGGTCGC +
Preference number: 4 (lower is better)
Translates to: PKEKSPSCYSEILTSEHVAARCS*RSHTGR
Trigger: GCGACCTGTGTGAGATCGCCAGGAACAGCGTGCTGC...AACATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR TCA 90 bp AAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATGTTAACGTATCCGCCCGCGGATaGCCCAGGTACTGGGATGTG +
Preference number: 4 (lower is better)
Translates to: KEKSPSCYSEILTSEHVNVSARG*PRYWDV
Trigger: CACATCCCAGTACCTGGGTCATCCGCGGGCGGATAC...GTTAACATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR TCA 90 bp CCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATGTTCGCGTGGACATCCAGTaGGTCCACAGTGAGGTCGTA +
Preference number: 4 (lower is better)
Translates to: PKEKSPSCYSEILTSEHVRVDIQ*VHSEVV
Trigger: TACGACCTCACTGTGGACTCACTGGATGTCCACGCG...AACATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR TCA 90 bp CTTGACCATCCGAGCAAAGTACTCTCCTCCCAGATAGTTTTCAGTTTTCAAATACGCGTGGACATCCAGTaGGTCCACAGTGAGGTCGTA +
Preference number: 4 (lower is better)
Translates to: LDHPSKVLSSQIVFSFQIRVDIQ*VHSEVV
Trigger: TACGACCTCACTGTGGACTCACTGGATGTCCACGCG...TATTTGAAAACTGAAAACTATCTGGGAGGAGAGTACTTTGCTCGGATGGTCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000533116.1
ENST00000534047.5
CDS-3UTR TCA 90 bp CCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATGTTGGAGAGCCGTGGCTCTaGGTACTGGTACTTGCTCTC +
Preference number: 4 (lower is better)
Translates to: PKEKSPSCYSEILTSEHVGEPWL*VLVLAL
Trigger: GAGAGCAAGTACCAGTACTCAGAGCCACGGCTCTCC...AACATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR TCA 90 bp TCCCAGATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTAGACCTTGTGCTGGATaGACCAGTAGGCCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: SQIPKEKSPSCYSEILTSRPCAG*TSRPGW
Trigger: CCAACCTGGCCTACTGGTTCATCCAGCACAAGGTCT...ACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGGGATCTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR TCA 90 bp CTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATTAGACCTTGTGCTGGATaGACCAGTAGGCCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: LISECHPDLSHICLSNIIRPCAG*TSRPGW
Trigger: CCAACCTGGCCTACTGGTTCATCCAGCACAAGGTCT...AATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529834.5
ENST00000534047.5
CDS-3UTR TCA 90 bp CATTGCATAAGGTCTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTAAATGTTGTCAGCAGTaGGGAAGGCAGACACCAGGT +
Preference number: 4 (lower is better)
Translates to: HCIRSHIGMPSGSEPHLSKCCQQ*GRQTPG
Trigger: ACCTGGTGTCTGCCTTCCTCACTGCTGACAACATTT...AGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAGACCTTATGCAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529744.1
ENST00000534047.5
CDS-3UTR TCA 90 bp CTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATTATACCGGACTCTTCTTaGGGAGCAGCCCGTGGGAAA +
Preference number: 4 (lower is better)
Translates to: LISECHPDLSHICLSNIIIPDSS*GAARGK
Trigger: TTTCCCACGGGCTGCTCCTCAAGAAGAGTCCGGTAT...AATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529834.5
ENST00000534047.5
CDS-3UTR TCA 90 bp ATCTCTTCTGATTTCATAGCATCAGACAGGAAGCTGAGCTCATTGCATAAGGTCATACCGGACTCTTCTTaGGGAGCAGCCCGTGGGAAA +
Preference number: 4 (lower is better)
Translates to: ISSDFIASDRKLSSLHKVIPDSS*GAARGK
Trigger: TTTCCCACGGGCTGCTCCTCAAGAAGAGTCCGGTAT...GACCTTATGCAATGAGCTCAGCTTCCTGTCTGATGCTATGAAATCAGAAGAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534047.5
CDS-3UTR TCA 90 bp AGTATAGACAAGTGCTCAGCTCCCAGATCCCCAAGGAGAAGTCACCATCTTGTTCTCAGCTTCCACACTTaGGCTGCAATGGCATATTCT +
Preference number: 4 (lower is better)
Translates to: SIDKCSAPRSPRRSHHLVLSFHT*AAMAYS
Trigger: AGAATATGCCATTGCAGCTCAAGTGTGGAAGCTGAG...AACAAGATGGTGACTTCTCCTTGGGGATCTGGGAGCTGAGCACTTGTCTATACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR TCA 90 bp CTACCAATTAGCCTACCTGGGCCAATGGAGAAAAGTATGGCAGAAAACCACATGATGTTACTTGGCATCTaGCCAGGGAAAATCCTGGCC +
Preference number: 4 (lower is better)
Translates to: LPISLPGPMEKSMAENHMMLLGI*PGKILA
Trigger: GGCCAGGATTTTCCCTGGTCAGATGCCAAGTAACAT...CATGTGGTTTTCTGCCATACTTTTCTCCATTGGCCCAGGTAGGCTAATTGGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR TCA 90 bp ATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATAAGATGCCACTCAAGTaGTGCACCCGGGTGAGGTGC +
Preference number: 4 (lower is better)
Translates to: IPKEKSPSCYSEILTSEHKMPLK*CTRVRC
Trigger: GCACCTCACCCGGGTGCATCACTTGAGTGGCATCTT...ATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528723.5
CDS-3UTR TCA 90 bp TCAGAGGCATCCTCTTCACAGAGGAAAGTCCTAGTTCGGAATCTTGACCACTATCTCCATGACTGGTCCTaGAGATGCCACTCAAGTGAT +
Preference number: 4 (lower is better)
Translates to: SEASSSQRKVLVRNLDHYLHDWS*RCHSSD
Trigger: ATCACTTGAGTGGCATCTTCAGGACCAGTCATGGAG...ATAGTGGTCAAGATTCCGAACTAGGACTTTCCTCTGTGAAGAGGATGCCTCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528723.5
CDS-3UTR GCA 90 bp CTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATTGCCAGGAGCCGGACTTaGTCATCCACTTCAGAGATG +
Preference number: 4 (lower is better)
Translates to: LISECHPDLSHICLSNIIARSRT*SSTSEM
Trigger: CATCTCTGAAGTGGATGAGCAAGTCCGGCTCCTGGC...AATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529834.5
ENST00000534047.5
CDS-3UTR GCA 90 bp CTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATTGGGACAGGGCATCTTTaGTGTCCTCTTCTCGGAGCA +
Preference number: 4 (lower is better)
Translates to: LISECHPDLSHICLSNIIGTGHL*CPLLGA
Trigger: TGCTCCGAGAAGAGGACAGCAAAGATGCCCTGTCCC...AATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529834.5
ENST00000534047.5
CDS-3UTR GCA 90 bp TCCCAGATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTTCCTTGGCTTCCTTTTaGCCGATGGGGCAGTCCTCT +
Preference number: 4 (lower is better)
Translates to: SQIPKEKSPSCYSEILTSSLASF*PMGQSS
Trigger: AGAGGACTGCCCCATCGGGCAAAAGGAAGCCAAGGA...ACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGGGATCTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR GCA 90 bp GTGAAGAAACCAAGACTCAGAATAGGAGTGGCTGTTTTCATGAGTACATTTGGCTCCTTGGCTTCCTTTTaGCCGATGGGGCAGTCCTCT +
Preference number: 4 (lower is better)
Translates to: VKKPRLRIGVAVFMSTFGSLASF*PMGQSS
Trigger: AGAGGACTGCCCCATCGGGCAAAAGGAAGCCAAGGA...GCCAAATGTACTCATGAAAACAGCCACTCCTATTCTGAGTCTTGGTTTCTTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
CDS-3UTR GCA 90 bp CTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATTTCCTTGGCTTCCTTTTaGCCGATGGGGCAGTCCTCT +
Preference number: 4 (lower is better)
Translates to: LISECHPDLSHICLSNIISLASF*PMGQSS
Trigger: AGAGGACTGCCCCATCGGGCAAAAGGAAGCCAAGGA...AATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529834.5
ENST00000534047.5
CDS-3UTR GCA 90 bp CCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATGTTTGCTGTGGCGGCATTTaGAGAGACAGGGACTGGGAC +
Preference number: 4 (lower is better)
Translates to: PKEKSPSCYSEILTSEHVCCGGI*RDRDWD
Trigger: GTCCCAGTCCCTGTCTCTGCAAATGCCGCCACAGCA...AACATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000528723.5
ENST00000529507.5
CDS-3UTR GCA 90 bp CAGATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGGGGCCCTTCCAATCTTaGTGTGGCGGCATTTGCAGA +
Preference number: 4 (lower is better)
Translates to: QIPKEKSPSCYSEILTSEGPFQS*CGGICR
Trigger: TCTGCAAATGCCGCCACAGCAAGATTGGAAGGGCCC...CTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGGGATCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000528723.5
ENST00000529507.5
CDS-3UTR GCA 90 bp TCCCAGATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGGGCCCTTCCAATCTTaGTGTGGCGGCATTTGCAGA +
Preference number: 4 (lower is better)
Translates to: SQIPKEKSPSCYSEILTSGPFQS*CGGICR
Trigger: TCTGCAAATGCCGCCACAGCAAGATTGGAAGGGCCC...ACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGGGATCTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000528723.5
ENST00000529507.5
CDS-3UTR GCA 90 bp CTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATTGGGCCCTTCCAATCTTaGTGTGGCGGCATTTGCAGA +
Preference number: 4 (lower is better)
Translates to: LISECHPDLSHICLSNIIGPFQS*CGGICR
Trigger: TCTGCAAATGCCGCCACAGCAAGATTGGAAGGGCCC...AATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529834.5
ENST00000534047.5
CDS-3UTR GCA 90 bp CAGATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGGGCCAGACTCTTGGCTaGCTGCTCATAGTCCTCCAA +
Preference number: 4 (lower is better)
Translates to: QIPKEKSPSCYSEILTSEGQTLG*LLIVLQ
Trigger: TTGGAGGACTATGAGCAGGCAGCCAAGAGTCTGGCC...CTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGGGATCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR GCA 90 bp CTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATTGGCCAGACTCTTGGCTaGCTGCTCATAGTCCTCCAA +
Preference number: 4 (lower is better)
Translates to: LISECHPDLSHICLSNIIGQTLG*LLIVLQ
Trigger: TTGGAGGACTATGAGCAGGCAGCCAAGAGTCTGGCC...AATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529834.5
ENST00000534047.5
CDS-3UTR GCA 90 bp TCTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATGGCCAGACTCTTGGCTaGCTGCTCATAGTCCTCCAA +
Preference number: 4 (lower is better)
Translates to: SHIGMPSGSEPHLSFEYHGQTLG*LLIVLQ
Trigger: TTGGAGGACTATGAGCAGGCAGCCAAGAGTCTGGCC...ATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534047.5
CDS-3UTR GCA 90 bp AAATTAGGAACAAGTATAGACAAGTGCTCAGCTCCCAGATCCCCAAGGAGAAGTGATGCTTTTGGTTCATaGAGGCGGCCGCATGGATGT +
Preference number: 4 (lower is better)
Translates to: KLGTSIDKCSAPRSPRRSDAFGS*RRPHGC
Trigger: ACATCCATGCGGCCGCCTGCATGAACCAAAAGCATC...ACTTCTCCTTGGGGATCTGGGAGCTGAGCACTTGTCTATACTTGTTCCTAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR GCA 90 bp AAAACACAATTTGTCAAGAAGGAAGTCTTCCATCTTAACTCCTTCAAAGTAGCCGCCACTCCTCAGGACTaGGGCCGTAGATGGAGAGCC +
Preference number: 4 (lower is better)
Translates to: KTQFVKKEVFHLNSFKVAATPQD*GRRWRA
Trigger: GGCTCTCCATCTACGGCCGCAGTCCTGAGGAGTGGC...GGCTACTTTGAAGGAGTTAAGATGGAAGACTTCCTTCTTGACAAATTGTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR GCA 90 bp GAACAGAGATCATCTAGTCCTGTGCTTTTTGAAGTTCTTCGTTCAAATGAAAATCCGGCTTCCCCACAGTaGGGCCGGAACAGGAACGTG +
Preference number: 4 (lower is better)
Translates to: EQRSSSPVLFEVLRSNENPASPQ*GRNRNV
Trigger: CACGTTCCTGTTCCGGCCGCACTGTGGGGAAGCCGG...ATTTTCATTTGAACGAAGAACTTCAAAAAGCACAGGACTAGATGATCTCTGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
CDS-3UTR GCA 90 bp CAGATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCACACAGGTCGCAGGTaGTCAGCTTCCACACTTGAG +
Preference number: 4 (lower is better)
Translates to: QIPKEKSPSCYSEILTSEHTGRR*SASTLE
Trigger: CTCAAGTGTGGAAGCTGAGCACCTGCGACCTGTGTG...CTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGGGATCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR GCA 90 bp CTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATTCACACAGGTCGCAGGTaGTCAGCTTCCACACTTGAG +
Preference number: 4 (lower is better)
Translates to: LISECHPDLSHICLSNIIHTGRR*SASTLE
Trigger: CTCAAGTGTGGAAGCTGAGCACCTGCGACCTGTGTG...AATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529744.1
ENST00000529834.5
ENST00000534047.5
CDS-3UTR CCA 90 bp ATTTCTTCAGAGGCATCCTCTTCACAGAGGAAAGTCCTAGTTCGGAATCTTGACCAGAGATGTTCAGCTTaGGAAACTGCCGCGGCATCT +
Preference number: 4 (lower is better)
Translates to: ISSEASSSQRKVLVRNLDQRCSA*ETAAAS
Trigger: AGATGCCGCGGCAGTTTCCCAAGCTGAACATCTCTG...GTCAAGATTCCGAACTAGGACTTTCCTCTGTGAAGAGGATGCCTCTGAAGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CCA 90 bp ATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATGCAGCTCCCTCTCCTTaGCTTCCTTTTGCCCGATGG +
Preference number: 4 (lower is better)
Translates to: IPKEKSPSCYSEILTSEHAAPSP*LPFARW
Trigger: CCATCGGGCAAAAGGAAGCCAAGGAGAGGGAGCTGC...ATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CCA 90 bp TTTGACCTAAATATGTCACTGGGGGACAGCAAAGACTCGCTTGTCAGGTGGATCTGCAGAGACAGGGACTaGGACCGAATCATCTTGAAA +
Preference number: 4 (lower is better)
Translates to: FDLNMSLGDSKDSLVRWICRDRD*DRIILK
Trigger: TTTCAAGATGATTCGGTCCCAGTCCCTGTCTCTGCA...GATCCACCTGACAAGCGAGTCTTTGCTGTCCCCCAGTGACATATTTAGGTCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534047.5
CDS-3UTR CCA 90 bp ATCCTGGCCCCAACAGTTCAGGCACTGGCAGTTTCAAGAGAAATACTTGGAAAACTTCCAATCTTGCTGTaGCGGCATTTGCAGAGACAG +
Preference number: 4 (lower is better)
Translates to: ILAPTVQALAVSREILGKLPILL*RHLQRQ
Trigger: CTGTCTCTGCAAATGCCGCCACAGCAAGATTGGAAG...TTTTCCAAGTATTTCTCTTGAAACTGCCAGTGCCTGAACTGTTGGGGCCAGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000529507.5
CDS-3UTR CCA 90 bp TCCTGGCCCCAACAGTTCAGGCACTGGCAGTTTCAAGAGAAATACTTGGAAAATCTTCCAATCTTGCTGTaGCGGCATTTGCAGAGACAG +
Preference number: 4 (lower is better)
Translates to: SWPQQFRHWQFQEKYLENLPILL*RHLQRQ
Trigger: CTGTCTCTGCAAATGCCGCCACAGCAAGATTGGAAG...ATTTTCCAAGTATTTCTCTTGAAACTGCCAGTGCCTGAACTGTTGGGGCCAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000529507.5
CDS-3UTR CCA 90 bp AAAACACAATTTGTCAAGAAGGAAGTCTTCCATCTTAACTCCTTCAAAGTAGCCCATGGCATAGGGTGCTaGCGTGGGCAGGGAAGTGGC +
Preference number: 4 (lower is better)
Translates to: KTQFVKKEVFHLNSFKVAHGIGC*RGQGSG
Trigger: GCCACTTCCCTGCCCACGCCAGCACCCTATGCCATG...GGCTACTTTGAAGGAGTTAAGATGGAAGACTTCCTTCTTGACAAATTGTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000529507.5
CDS-3UTR CCA 90 bp TCCCAGATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTCCTTGGCCAGACTCTTaGCTGCCTGCTCATAGTCCT +
Preference number: 4 (lower is better)
Translates to: SQIPKEKSPSCYSEILTSPWPDS*LPAHSP
Trigger: AGGACTATGAGCAGGCAGCCAAGAGTCTGGCCAAGG...ACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGGGATCTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CCA 90 bp CTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATTCCTTGGCCAGACTCTTaGCTGCCTGCTCATAGTCCT +
Preference number: 4 (lower is better)
Translates to: LISECHPDLSHICLSNIIPWPDS*LPAHSP
Trigger: AGGACTATGAGCAGGCAGCCAAGAGTCTGGCCAAGG...AATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529834.5
ENST00000534047.5
CDS-3UTR CCA 90 bp CTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATTGGATCATTAGGGCCTTaGCCAGACTCTTGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: LISECHPDLSHICLSNIIGSLGP*PDSWLP
Trigger: AGGCAGCCAAGAGTCTGGCCAAGGCCCTAATGATCC...AATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529834.5
ENST00000534047.5
CDS-3UTR CCA 90 bp CTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATTCCAAGTAATCCAGGTTaGGGGGTGCATCATCCAGGC +
Preference number: 4 (lower is better)
Translates to: LISECHPDLSHICLSNIIPSNPG*GVHHPG
Trigger: GCCTGGATGATGCACCCCCCAACCTGGATTACTTGG...AATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529834.5
CDS-3UTR CCA 90 bp ATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATAGGCTGTGCGGCTCCTaGTGCTCCAGCATCTTCTTG +
Preference number: 4 (lower is better)
Translates to: IPKEKSPSCYSEILTSEHRLCGS*CSSIFL
Trigger: CAAGAAGATGCTGGAGCACCAGGAGCCGCACAGCCT...ATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CCA 90 bp GGTGAAGAAACCAAGACTCAGAATAGGAGTGGCTGTTTTCATGAGTACATTTGGATGCAGGCGGCCGCATaGATGTGTGTGTCCACCTTT +
Preference number: 4 (lower is better)
Translates to: GEETKTQNRSGCFHEYIWMQAAA*MCVSTF
Trigger: AAAGGTGGACACACACATCCATGCGGCCGCCTGCAT...CCAAATGTACTCATGAAAACAGCCACTCCTATTCTGAGTCTTGGTTTCTTCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
CDS-3UTR CCA 90 bp CTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATTATGCAGGCGGCCGCATaGATGTGTGTGTCCACCTTT +
Preference number: 4 (lower is better)
Translates to: LISECHPDLSHICLSNIIMQAAA*MCVSTF
Trigger: AAAGGTGGACACACACATCCATGCGGCCGCCTGCAT...AATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529834.5
ENST00000534047.5
CDS-3UTR CCA 90 bp CCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATGTTAACTTGTCAAAGCGGTaGAATGTCTGCCGGCCCGCG +
Preference number: 4 (lower is better)
Translates to: PKEKSPSCYSEILTSEHVNLSKR*NVCRPA
Trigger: CGCGGGCCGGCAGACATTCCACCGCTTTGACAAGTT...AACATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CCA 90 bp ATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATGGTCACGCAGCTCACTaGCCCCCACAGGGTTGTATT +
Preference number: 4 (lower is better)
Translates to: IPKEKSPSCYSEILTSEHGHAAH*PPQGCI
Trigger: AATACAACCCTGTGGGGGCCAGTGAGCTGCGTGACC...ATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CCA 90 bp TCCCAGATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTCGTGGCTCTGAGTACTaGTACTTGCTCTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: SQIPKEKSPSCYSEILTSRGSEY*YLLSSS
Trigger: GCTGGAGGAGAGCAAGTACCAGTACTCAGAGCCACG...ACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGGGATCTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CCA 90 bp CAGATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCGTGGCTCTGAGTACTaGTACTTGCTCTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: QIPKEKSPSCYSEILTSERGSEY*YLLSSS
Trigger: GCTGGAGGAGAGCAAGTACCAGTACTCAGAGCCACG...CTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGGGATCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CCA 90 bp AATGAACAACTACCAATTAGCCTACCTGGGCCAATGGAGAAAAGTATGGCAGAACGTGGCTCTGAGTACTaGTACTTGCTCTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: NEQLPISLPGPMEKSMAERGSEY*YLLSSS
Trigger: GCTGGAGGAGAGCAAGTACCAGTACTCAGAGCCACG...TTCTGCCATACTTTTCTCCATTGGCCCAGGTAGGCTAATTGGTAGTTGTTCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR CCA 90 bp CTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATTCGTGGCTCTGAGTACTaGTACTTGCTCTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: LISECHPDLSHICLSNIIRGSEY*YLLSSS
Trigger: GCTGGAGGAGAGCAAGTACCAGTACTCAGAGCCACG...AATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529834.5
ENST00000534047.5
CDS-3UTR CCA 90 bp AAATTAGGAACAAGTATAGACAAGTGCTCAGCTCCCAGATCCCCAAGGAGAAGTCCAGACGTCCGGGTTTaGGCTCTTGTCGGAAAACAT +
Preference number: 4 (lower is better)
Translates to: KLGTSIDKCSAPRSPRRSPDVRV*ALVGKH
Trigger: ATGTTTTCCGACAAGAGCCCAAACCCGGACGTCTGG...ACTTCTCCTTGGGGATCTGGGAGCTGAGCACTTGTCTATACTTGTTCCTAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR CCA 90 bp GAAGAAACCAAGACTCAGAATAGGAGTGGCTGTTTTCATGAGTACATTTGGCTTGTGGGTTCTGCTCACTaGTCCAGACGTCCGGGTTTG +
Preference number: 4 (lower is better)
Translates to: EETKTQNRSGCFHEYIWLVGSAH*SRRPGL
Trigger: CAAACCCGGACGTCTGGACCAGTGAGCAGAACCCAC...AAGCCAAATGTACTCATGAAAACAGCCACTCCTATTCTGAGTCTTGGTTTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
CDS-3UTR CCA 90 bp ATTTCTTCAGAGGCATCCTCTTCACAGAGGAAAGTCCTAGTTCGGAATCTTGACTTGAGGAGCAGCCCGTaGGAAATGTTGTCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: ISSEASSSQRKVLVRNLDLRSSP*EMLSAV
Trigger: CACTGCTGACAACATTTCCCACGGGCTGCTCCTCAA...GTCAAGATTCCGAACTAGGACTTTCCTCTGTGAAGAGGATGCCTCTGAAGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CCA 90 bp AGGTCTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATTTGAGGAGCAGCCCGTaGGAAATGTTGTCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: RSHIGMPSGSEPHLSFEYLRSSP*EMLSAV
Trigger: CACTGCTGACAACATTTCCCACGGGCTGCTCCTCAA...ATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAGACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529744.1
ENST00000534047.5
CDS-3UTR CCA 90 bp GACAGGAAGCTGAGCTCATTGCATAAGGTCTCATATCGGAATGCCATCCGGATCCCCTCAGAGGGTTCTTaGAATATTCGAGGAACAAAC +
Preference number: 4 (lower is better)
Translates to: DRKLSSLHKVSYRNAIRIPSEGS*NIRGTN
Trigger: GTTTGTTCCTCGAATATTCCAAGAACCCTCTGAGGG...GATCCGGATGGCATTCCGATATGAGACCTTATGCAATGAGCTCAGCTTCCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529744.1
ENST00000534047.5
CDS-3UTR TCA 90 bp GAACAGAGATCATCTAGTCCTGTGCTTTTTGAAGTTCTTCGTTCAAATGAAAATGTATCCGCCCGCGGATaGCCCAGGTACTGGGATGTG +
Preference number: 4 (lower is better)
Translates to: EQRSSSPVLFEVLRSNENVSARG*PRYWDV
Trigger: CACATCCCAGTACCTGGGTCATCCGCGGGCGGATAC...ATTTTCATTTGAACGAAGAACTTCAAAAAGCACAGGACTAGATGATCTCTGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
CDS-3UTR TCA 90 bp ATTTCTTCAGAGGCATCCTCTTCACAGAGGAAAGTCCTAGTTCGGAATCTTGACAAATGTTGTCAGCAGTaGGGAAGGCAGACACCAGGT +
Preference number: 4 (lower is better)
Translates to: ISSEASSSQRKVLVRNLDKCCQQ*GRQTPG
Trigger: ACCTGGTGTCTGCCTTCCTCACTGCTGACAACATTT...GTCAAGATTCCGAACTAGGACTTTCCTCTGTGAAGAGGATGCCTCTGAAGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR TCA 90 bp GAAGAAACCAAGACTCAGAATAGGAGTGGCTGTTTTCATGAGTACATTTGGCTTATACCGGACTCTTCTTaGGGAGCAGCCCGTGGGAAA +
Preference number: 4 (lower is better)
Translates to: EETKTQNRSGCFHEYIWLIPDSS*GAARGK
Trigger: TTTCCCACGGGCTGCTCCTCAAGAAGAGTCCGGTAT...AAGCCAAATGTACTCATGAAAACAGCCACTCCTATTCTGAGTCTTGGTTTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
CDS-3UTR TCA 90 bp CCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATGTTATACCGGACTCTTCTTaGGGAGCAGCCCGTGGGAAA +
Preference number: 4 (lower is better)
Translates to: PKEKSPSCYSEILTSEHVIPDSS*GAARGK
Trigger: TTTCCCACGGGCTGCTCCTCAAGAAGAGTCCGGTAT...AACATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR TCA 90 bp TCAGAGGCATCCTCTTCACAGAGGAAAGTCCTAGTTCGGAATCTTGACCACTATCATCAGACAGGAAGCTaGGCTCATTGCATAAGGTCT +
Preference number: 4 (lower is better)
Translates to: SEASSSQRKVLVRNLDHYHQTGS*AHCIRS
Trigger: AGACCTTATGCAATGAGCTCAGCTTCCTGTCTGATG...ATAGTGGTCAAGATTCCGAACTAGGACTTTCCTCTGTGAAGAGGATGCCTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR TCA 90 bp TCCTGGCCCCAACAGTTCAGGCACTGGCAGTTTCAAGAGAAATACTTGGAAAATCATCAGACAGGAAGCTaGGCTCATTGCATAAGGTCT +
Preference number: 4 (lower is better)
Translates to: SWPQQFRHWQFQEKYLENHQTGS*AHCIRS
Trigger: AGACCTTATGCAATGAGCTCAGCTTCCTGTCTGATG...ATTTTCCAAGTATTTCTCTTGAAACTGCCAGTGCCTGAACTGTTGGGGCCAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR TCA 90 bp TCAGAGGCATCCTCTTCACAGAGGAAAGTCCTAGTTCGGAATCTTGACCACTATGGCGGTGATCTCTTCTaGTTTCATAGCATCAGACAG +
Preference number: 4 (lower is better)
Translates to: SEASSSQRKVLVRNLDHYGGDLF*FHSIRQ
Trigger: CTGTCTGATGCTATGAAATCAGAAGAGATCACCGCC...ATAGTGGTCAAGATTCCGAACTAGGACTTTCCTCTGTGAAGAGGATGCCTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR TCA 90 bp ATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATCACTTTGACAGCCCCTaGGCATCACTCACTCCCTTC +
Preference number: 4 (lower is better)
Translates to: IPKEKSPSCYSEILTSEHHFDSP*ASLTPF
Trigger: GAAGGGAGTGAGTGATGCTCAGGGGCTGTCAAAGTG...ATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
CDS-3UTR TCA 90 bp AATGAACAACTACCAATTAGCCTACCTGGGCCAATGGAGAAAAGTATGGCAGAATTCCATATGCTGAATTaGCCAGTGGAGGGGACAGGC +
Preference number: 4 (lower is better)
Translates to: NEQLPISLPGPMEKSMAEFHMLN*PVEGTG
Trigger: GCCTGTCCCCTCCACTGGTCAATTCAGCATATGGAA...TTCTGCCATACTTTTCTCCATTGGCCCAGGTAGGCTAATTGGTAGTTGTTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444303.6
CDS-3UTR GCA 90 bp ATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATGCCAGGAGCCGGACTTaGTCATCCACTTCAGAGATG +
Preference number: 4 (lower is better)
Translates to: IPKEKSPSCYSEILTSEHARSRT*SSTSEM
Trigger: CATCTCTGAAGTGGATGAGCAAGTCCGGCTCCTGGC...ATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR GCA 90 bp CCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATGTTGGGACAGGGCATCTTTaGTGTCCTCTTCTCGGAGCA +
Preference number: 4 (lower is better)
Translates to: PKEKSPSCYSEILTSEHVGTGHL*CPLLGA
Trigger: TGCTCCGAGAAGAGGACAGCAAAGATGCCCTGTCCC...AACATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR GCA 90 bp AAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATGTTAACAGGCATGGCATAGGGTaGTGGCGTGGGCAGGGAAGT +
Preference number: 4 (lower is better)
Translates to: KEKSPSCYSEILTSEHVNRHGIG*WRGQGS
Trigger: ACTTCCCTGCCCACGCCAGCACCCTATGCCATGCCT...GTTAACATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000528723.5
ENST00000529507.5
CDS-3UTR GCA 90 bp AAAACACAATTTGTCAAGAAGGAAGTCTTCCATCTTAACTCCTTCAAAGTAGCCAGGCATGGCATAGGGTaGTGGCGTGGGCAGGGAAGT +
Preference number: 4 (lower is better)
Translates to: KTQFVKKEVFHLNSFKVARHGIG*WRGQGS
Trigger: ACTTCCCTGCCCACGCCAGCACCCTATGCCATGCCT...GGCTACTTTGAAGGAGTTAAGATGGAAGACTTCCTTCTTGACAAATTGTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000529507.5
CDS-3UTR GCA 90 bp TCCCAGATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTCATACACAAAGAGGATaGCCCCCTGCATGTGGACCA +
Preference number: 4 (lower is better)
Translates to: SQIPKEKSPSCYSEILTSHTQRG*PPACGP
Trigger: TGGTCCACATGCAGGGGGGCATCCTCTTTGTGTATG...ACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGGGATCTGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR GCA 90 bp CTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATTCATACACAAAGAGGATaGCCCCCTGCATGTGGACCA +
Preference number: 4 (lower is better)
Translates to: LISECHPDLSHICLSNIIHTQRG*PPACGP
Trigger: TGGTCCACATGCAGGGGGGCATCCTCTTTGTGTATG...AATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529834.5
CDS-3UTR GCA 90 bp CTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATTCTGTGCGGCTCCTGGTaGTCCAGCATCTTCTTGTTA +
Preference number: 4 (lower is better)
Translates to: LISECHPDLSHICLSNIILCGSW*SSIFLL
Trigger: TAACAAGAAGATGCTGGAGCACCAGGAGCCGCACAG...AATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529834.5
ENST00000534047.5
CDS-3UTR GCA 90 bp TCCCAGATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGATGCTTTTGGTTCATaGAGGCGGCCGCATGGATGT +
Preference number: 4 (lower is better)
Translates to: SQIPKEKSPSCYSEILTSDAFGS*RRPHGC
Trigger: ACATCCATGCGGCCGCCTGCATGAACCAAAAGCATC...ACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGGGATCTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR GCA 90 bp CTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATTGATGCTTTTGGTTCATaGAGGCGGCCGCATGGATGT +
Preference number: 4 (lower is better)
Translates to: LISECHPDLSHICLSNIIDAFGS*RRPHGC
Trigger: ACATCCATGCGGCCGCCTGCATGAACCAAAAGCATC...AATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529834.5
ENST00000534047.5
CDS-3UTR GCA 90 bp CATCCGAGCAAAGTACTCTCCTCCCAGATAGTTTTCAGTTTTCAAATACAGGTCGATGCTTTTGGTTCATaGAGGCGGCCGCATGGATGT +
Preference number: 4 (lower is better)
Translates to: HPSKVLSSQIVFSFQIQVDAFGS*RRPHGC
Trigger: ACATCCATGCGGCCGCCTGCATGAACCAAAAGCATC...GACCTGTATTTGAAAACTGAAAACTATCTGGGAGGAGAGTACTTTGCTCGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000534047.5
CDS-3UTR GCA 90 bp ATATTTAAGGAAGAGGTGAAGCTCTCGATGATCTTGGGGGTTGATAGTGGCCTTTCCGTCTGGTATGTGTaGTTGATGAAGCGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: IFKEEVKLSMILGVDSGLSVWYV*LMKRSR
Trigger: TCTGCTGCGCTTCATCAAGCACACATACCAGACGGA...AAGGCCACTATCAACCCCCAAGATCATCGAGAGCTTCACCTCTTCCTTAAATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534047.5
CDS-3UTR GCA 90 bp AAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATGTTAACAGGCCGTCAAACACCTaGCGCAGGGTGATCTTCCGG +
Preference number: 4 (lower is better)
Translates to: KEKSPSCYSEILTSEHVNRPSNT*RRVIFR
Trigger: CCGGAAGATCACCCTGCGGCAGGTGTTTGACGGCCT...GTTAACATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR GCA 90 bp GAACAGAGATCATCTAGTCCTGTGCTTTTTGAAGTTCTTCGTTCAAATGAAAATAAGCGGTGGAATGTCTaGCGGCCCGCGTGGACATCC +
Preference number: 4 (lower is better)
Translates to: EQRSSSPVLFEVLRSNENKRWNV*RPAWTS
Trigger: GGATGTCCACGCGGGCCGGCAGACATTCCACCGCTT...ATTTTCATTTGAACGAAGAACTTCAAAAAGCACAGGACTAGATGATCTCTGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
CDS-3UTR GCA 90 bp GAACAGAGATCATCTAGTCCTGTGCTTTTTGAAGTTCTTCGTTCAAATGAAAATGCCACTCCTCAGGACTaGGGCCGTAGATGGAGAGCC +
Preference number: 4 (lower is better)
Translates to: EQRSSSPVLFEVLRSNENATPQD*GRRWRA
Trigger: GGCTCTCCATCTACGGCCGCAGTCCTGAGGAGTGGC...ATTTTCATTTGAACGAAGAACTTCAAAAAGCACAGGACTAGATGATCTCTGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
CDS-3UTR GCA 90 bp GACAGGAAGCTGAGCTCATTGCATAAGGTCTCATATCGGAATGCCATCCGGATCGTGGAAAGAGAAACATaGAGTCCCTTGTGTAGGAAT +
Preference number: 4 (lower is better)
Translates to: DRKLSSLHKVSYRNAIRIVERET*SPLCRN
Trigger: ATTCCTACACAAGGGACTGCATGTTTCTCTTTCCAC...GATCCGGATGGCATTCCGATATGAGACCTTATGCAATGAGCTCAGCTTCCTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529744.1
ENST00000534047.5
CDS-3UTR GCA 90 bp GAAGAAACCAAGACTCAGAATAGGAGTGGCTGTTTTCATGAGTACATTTGGCTTCACACAGGTCGCAGGTaGTCAGCTTCCACACTTGAG +
Preference number: 4 (lower is better)
Translates to: EETKTQNRSGCFHEYIWLHTGRR*SASTLE
Trigger: CTCAAGTGTGGAAGCTGAGCACCTGCGACCTGTGTG...AAGCCAAATGTACTCATGAAAACAGCCACTCCTATTCTGAGTCTTGGTTTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
CDS-3UTR GCA 90 bp TCTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATGGTCTCATATCGGAATaGCATCCGGATCTGAGCCAC +
Preference number: 4 (lower is better)
Translates to: SHIGMPSGSEPHLSFEYHGLISE*HPDLSH
Trigger: GTGGCTCAGATCCGGATGGCATTCCGATATGAGACC...ATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529744.1
ENST00000534047.5
CDS-3UTR GCA 90 bp CCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATGTTTTCAGCTTGGGAAACTaGCGCGGCATCTCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: PKEKSPSCYSEILTSEHVFSLGN*RGISAE
Trigger: CTCAGCTGAGATGCCGCGGCAGTTTCCCAAGCTGAA...AACATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528723.5
CDS-3UTR CCA 90 bp CAGATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCAGAGATGTTCAGCTTaGGAAACTGCCGCGGCATCT +
Preference number: 4 (lower is better)
Translates to: QIPKEKSPSCYSEILTSEQRCSA*ETAAAS
Trigger: AGATGCCGCGGCAGTTTCCCAAGCTGAACATCTCTG...CTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGGGATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CCA 90 bp CTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATTCAGAGATGTTCAGCTTaGGAAACTGCCGCGGCATCT +
Preference number: 4 (lower is better)
Translates to: LISECHPDLSHICLSNIIQRCSA*ETAAAS
Trigger: AGATGCCGCGGCAGTTTCCCAAGCTGAACATCTCTG...AATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529834.5
ENST00000534047.5
CDS-3UTR CCA 90 bp TCAGAGGCATCCTCTTCACAGAGGAAAGTCCTAGTTCGGAATCTTGACCACTATTGCAGAGACAGGGACTaGGACCGAATCATCTTGAAA +
Preference number: 4 (lower is better)
Translates to: SEASSSQRKVLVRNLDHYCRDRD*DRIILK
Trigger: TTTCAAGATGATTCGGTCCCAGTCCCTGTCTCTGCA...ATAGTGGTCAAGATTCCGAACTAGGACTTTCCTCTGTGAAGAGGATGCCTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CCA 90 bp AAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATGTTAACGCTGGAACTCAGGCATaGCATAGGGTGCTGGCGTGG +
Preference number: 4 (lower is better)
Translates to: KEKSPSCYSEILTSEHVNAGTQA*HRVLAW
Trigger: CCACGCCAGCACCCTATGCCATGCCTGAGTTCCAGC...GTTAACATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CCA 90 bp CTTGACCATCCGAGCAAAGTACTCTCCTCCCAGATAGTTTTCAGTTTTCAAATACCTTGGCCAGACTCTTaGCTGCCTGCTCATAGTCCT +
Preference number: 4 (lower is better)
Translates to: LDHPSKVLSSQIVFSFQIPWPDS*LPAHSP
Trigger: AGGACTATGAGCAGGCAGCCAAGAGTCTGGCCAAGG...TATTTGAAAACTGAAAACTATCTGGGAGGAGAGTACTTTGCTCGGATGGTCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534047.5
CDS-3UTR CCA 90 bp CCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATGTTGGATCATTAGGGCCTTaGCCAGACTCTTGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: PKEKSPSCYSEILTSEHVGSLGP*PDSWLP
Trigger: AGGCAGCCAAGAGTCTGGCCAAGGCCCTAATGATCC...AACATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CCA 90 bp CCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATGTTATGCAGGCGGCCGCATaGATGTGTGTGTCCACCTTT +
Preference number: 4 (lower is better)
Translates to: PKEKSPSCYSEILTSEHVMQAAA*MCVSTF
Trigger: AAAGGTGGACACACACATCCATGCGGCCGCCTGCAT...AACATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CCA 90 bp ATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATATGCAGGCGGCCGCATaGATGTGTGTGTCCACCTTT +
Preference number: 4 (lower is better)
Translates to: IPKEKSPSCYSEILTSEHMQAAA*MCVSTF
Trigger: AAAGGTGGACACACACATCCATGCGGCCGCCTGCAT...ATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CCA 90 bp AAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATGTTAACGACTGCGGCCGTAGATaGAGAGCCGTGGCTCTGAGT +
Preference number: 4 (lower is better)
Translates to: KEKSPSCYSEILTSEHVNDCGRR*RAVALS
Trigger: ACTCAGAGCCACGGCTCTCCATCTACGGCCGCAGTC...GTTAACATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CCA 90 bp TCAGAGGCATCCTCTTCACAGAGGAAAGTCCTAGTTCGGAATCTTGACCACTATTTGTCGGAAAACATGTaGTCGCTGTGCTTGGACTCA +
Preference number: 4 (lower is better)
Translates to: SEASSSQRKVLVRNLDHYLSENM*SLCLDS
Trigger: TGAGTCCAAGCACAGCGACCACATGTTTTCCGACAA...ATAGTGGTCAAGATTCCGAACTAGGACTTTCCTCTGTGAAGAGGATGCCTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CCA 90 bp AATGAACAACTACCAATTAGCCTACCTGGGCCAATGGAGAAAAGTATGGCAGAACCAGACGTCCGGGTTTaGGCTCTTGTCGGAAAACAT +
Preference number: 4 (lower is better)
Translates to: NEQLPISLPGPMEKSMAEPDVRV*ALVGKH
Trigger: ATGTTTTCCGACAAGAGCCCAAACCCGGACGTCTGG...TTCTGCCATACTTTTCTCCATTGGCCCAGGTAGGCTAATTGGTAGTTGTTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR CCA 90 bp CTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATTCCAGACGTCCGGGTTTaGGCTCTTGTCGGAAAACAT +
Preference number: 4 (lower is better)
Translates to: LISECHPDLSHICLSNIIPDVRV*ALVGKH
Trigger: ATGTTTTCCGACAAGAGCCCAAACCCGGACGTCTGG...AATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529834.5
ENST00000534047.5
CDS-3UTR CCA 90 bp CTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATTGTAGTAGCTGTAGGGTaGGTTCTGCTCACTGGTCCA +
Preference number: 4 (lower is better)
Translates to: LISECHPDLSHICLSNIIVVAVG*VLLTGP
Trigger: TGGACCAGTGAGCAGAACCCACCCTACAGCTACTAC...AATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529834.5
ENST00000534047.5
CDS-3UTR CCA 90 bp GGTGAAGAAACCAAGACTCAGAATAGGAGTGGCTGTTTTCATGAGTACATTTGGTTGAGGAGCAGCCCGTaGGAAATGTTGTCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: GEETKTQNRSGCFHEYIWLRSSP*EMLSAV
Trigger: CACTGCTGACAACATTTCCCACGGGCTGCTCCTCAA...CCAAATGTACTCATGAAAACAGCCACTCCTATTCTGAGTCTTGGTTTCTTCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
CDS-3UTR CCA 90 bp GTGAAGAAACCAAGACTCAGAATAGGAGTGGCTGTTTTCATGAGTACATTTGGCTTGAGGAGCAGCCCGTaGGAAATGTTGTCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: VKKPRLRIGVAVFMSTFGLRSSP*EMLSAV
Trigger: CACTGCTGACAACATTTCCCACGGGCTGCTCCTCAA...GCCAAATGTACTCATGAAAACAGCCACTCCTATTCTGAGTCTTGGTTTCTTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
CDS-3UTR CCA 90 bp CTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATTTTGAGGAGCAGCCCGTaGGAAATGTTGTCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: LISECHPDLSHICLSNIILRSSP*EMLSAV
Trigger: CACTGCTGACAACATTTCCCACGGGCTGCTCCTCAA...AATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529744.1
ENST00000529834.5
ENST00000534047.5
CDS-3UTR CCA 90 bp TCTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATTTGAGGAGCAGCCCGTaGGAAATGTTGTCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: SHIGMPSGSEPHLSFEYHLRSSP*EMLSAV
Trigger: CACTGCTGACAACATTTCCCACGGGCTGCTCCTCAA...ATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529744.1
ENST00000534047.5
CDS-3UTR CCA 90 bp ATTTCTTCAGAGGCATCCTCTTCACAGAGGAAAGTCCTAGTTCGGAATCTTGACGCATGGGGTCATCGGTaGAAAGAGAAACATGCAGTC +
Preference number: 4 (lower is better)
Translates to: ISSEASSSQRKVLVRNLDAWGHR*KEKHAV
Trigger: GACTGCATGTTTCTCTTTCCACCGATGACCCCATGC...GTCAAGATTCCGAACTAGGACTTTCCTCTGTGAAGAGGATGCCTCTGAAGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CCA 90 bp CCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATGTTGACCAGGGAAAATCCTaGCCCCAACAGTTCAGGCAC +
Preference number: 4 (lower is better)
Translates to: PKEKSPSCYSEILTSEHVDQGKS*PQQFRH
Trigger: GTGCCTGAACTGTTGGGGCCAGGATTTTCCCTGGTC...AACATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR CCA 90 bp GCACCTACTACATACCAGGCACTAGTAACACAGATAAAGAGTACACTGATAAAGGACCAGGGAAAATCCTaGCCCCAACAGTTCAGGCAC +
Preference number: 4 (lower is better)
Translates to: APTTYQALVTQIKSTLIKDQGKS*PQQFRH
Trigger: GTGCCTGAACTGTTGGGGCCAGGATTTTCCCTGGTC...CTTTATCAGTGTACTCTTTATCTGTGTTACTAGTGCCTGGTATGTAGTAGGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396553.6
ENST00000444303.6
CDS-3UTR CCA 90 bp TCAGAGGCATCCTCTTCACAGAGGAAAGTCCTAGTTCGGAATCTTGACCACTATGCCTACCTGGGCCAATaGAGAAAAGTATGGCAGAAA +
Preference number: 4 (lower is better)
Translates to: SEASSSQRKVLVRNLDHYAYLGQ*RKVWQK
Trigger: TTTCTGCCATACTTTTCTCCATTGGCCCAGGTAGGC...ATAGTGGTCAAGATTCCGAACTAGGACTTTCCTCTGTGAAGAGGATGCCTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR CCA 90 bp ATTTCTTCAGAGGCATCCTCTTCACAGAGGAAAGTCCTAGTTCGGAATCTTGACAGAGCAGGAAAAGCCTaGGCTGGAAATTCTCTCGTG +
Preference number: 4 (lower is better)
Translates to: ISSEASSSQRKVLVRNLDRAGKA*AGNSLV
Trigger: CACGAGAGAATTTCCAGCCCAGGCTTTTCCTGCTCT...GTCAAGATTCCGAACTAGGACTTTCCTCTGTGAAGAGGATGCCTCTGAAGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528723.5
CDS-3UTR CCA 90 bp ATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATGTCCTGTCTGCCGGCTaGAGTAGGAGGTCTCTGTTT +
Preference number: 4 (lower is better)
Translates to: IPKEKSPSCYSEILTSEHVLSAG*SRRSLF
Trigger: AAACAGAGACCTCCTACTCCAGCCGGCAGACAGGAC...ATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528723.5
CDS-3UTR TCA 90 bp TTTGACCTAAATATGTCACTGGGGGACAGCAAAGACTCGCTTGTCAGGTGGATCACATCTCATGAAGGCTaGACTTGGATTCCAGAAAGT +
Preference number: 4 (lower is better)
Translates to: FDLNMSLGDSKDSLVRWITSHEG*TWIPES
Trigger: ACTTTCTGGAATCCAAGTTCAGCCTTCATGAGATGT...GATCCACCTGACAAGCGAGTCTTTGCTGTCCCCCAGTGACATATTTAGGTCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534047.5
CDS-3UTR TCA 90 bp AAAACACAATTTGTCAAGAAGGAAGTCTTCCATCTTAACTCCTTCAAAGTAGCCGGAGAGCCGTGGCTCTaGGTACTGGTACTTGCTCTC +
Preference number: 4 (lower is better)
Translates to: KTQFVKKEVFHLNSFKVAGEPWL*VLVLAL
Trigger: GAGAGCAAGTACCAGTACTCAGAGCCACGGCTCTCC...GGCTACTTTGAAGGAGTTAAGATGGAAGACTTCCTTCTTGACAAATTGTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR TCA 90 bp CTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATTAAATGTTGTCAGCAGTaGGGAAGGCAGACACCAGGT +
Preference number: 4 (lower is better)
Translates to: LISECHPDLSHICLSNIIKCCQQ*GRQTPG
Trigger: ACCTGGTGTCTGCCTTCCTCACTGCTGACAACATTT...AATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529744.1
ENST00000529834.5
ENST00000534047.5
CDS-3UTR TCA 90 bp AGGTCTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCTCAGCTTCCACACTTaGGCTGCAATGGCATATTCT +
Preference number: 4 (lower is better)
Translates to: RSHIGMPSGSEPHLSFEYLSFHT*AAMAYS
Trigger: AGAATATGCCATTGCAGCTCAAGTGTGGAAGCTGAG...ATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAGACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529744.1
ENST00000534047.5
CDS-3UTR TCA 90 bp ATTTCTTCAGAGGCATCCTCTTCACAGAGGAAAGTCCTAGTTCGGAATCTTGACGGCGGTGATCTCTTCTaGTTTCATAGCATCAGACAG +
Preference number: 4 (lower is better)
Translates to: ISSEASSSQRKVLVRNLDGGDLF*FHSIRQ
Trigger: CTGTCTGATGCTATGAAATCAGAAGAGATCACCGCC...GTCAAGATTCCGAACTAGGACTTTCCTCTGTGAAGAGGATGCCTCTGAAGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR TCA 90 bp GCTTTCTACTTGGCCCCTGGGACCATTGTATCTTCTGAAGTCATCATAGTAGATGGCGGTGATCTCTTCTaGTTTCATAGCATCAGACAG +
Preference number: 4 (lower is better)
Translates to: AFYLAPGTIVSSEVIIVDGGDLF*FHSIRQ
Trigger: CTGTCTGATGCTATGAAATCAGAAGAGATCACCGCC...ATCTACTATGATGACTTCAGAAGATACAATGGTCCCAGGGGCCAAGTAGAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396553.6
ENST00000444303.6
CDS-3UTR TCA 90 bp AAATTAGGAACAAGTATAGACAAGTGCTCAGCTCCCAGATCCCCAAGGAGAAGTGGCGGTGATCTCTTCTaGTTTCATAGCATCAGACAG +
Preference number: 4 (lower is better)
Translates to: KLGTSIDKCSAPRSPRRSGGDLF*FHSIRQ
Trigger: CTGTCTGATGCTATGAAATCAGAAGAGATCACCGCC...ACTTCTCCTTGGGGATCTGGGAGCTGAGCACTTGTCTATACTTGTTCCTAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR TCA 90 bp ATTTCTTCAGAGGCATCCTCTTCACAGAGGAAAGTCCTAGTTCGGAATCTTGACCCTAGTTCGGAATCTTaGCCACTATTAGCCACAGCA +
Preference number: 4 (lower is better)
Translates to: ISSEASSSQRKVLVRNLDPSSES*PLLATA
Trigger: TGCTGTGGCTAATAGTGGTCAAGATTCCGAACTAGG...GTCAAGATTCCGAACTAGGACTTTCCTCTGTGAAGAGGATGCCTCTGAAGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR TCA 90 bp CAGATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGATGTTACTTGGCATCTaGCCAGGGAAAATCCTGGCC +
Preference number: 4 (lower is better)
Translates to: QIPKEKSPSCYSEILTSEMLLGI*PGKILA
Trigger: GGCCAGGATTTTCCCTGGTCAGATGCCAAGTAACAT...CTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGGGATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR TCA 90 bp ATCCTGGCCCCAACAGTTCAGGCACTGGCAGTTTCAAGAGAAATACTTGGAAAACAGCCATCCAGAGGCTaGAATGAACAACTACCAATT +
Preference number: 4 (lower is better)
Translates to: ILAPTVQALAVSREILGKQPSRG*NEQLPI
Trigger: AATTGGTAGTTGTTCATTTCAGCCTCTGGATGGCTG...TTTTCCAAGTATTTCTCTTGAAACTGCCAGTGCCTGAACTGTTGGGGCCAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR TCA 90 bp TCCTGGCCCCAACAGTTCAGGCACTGGCAGTTTCAAGAGAAATACTTGGAAAATTATACTTCCATATGCTaGATTGACCAGTGGAGGGGA +
Preference number: 4 (lower is better)
Translates to: SWPQQFRHWQFQEKYLENYTSIC*IDQWRG
Trigger: TCCCCTCCACTGGTCAATTCAGCATATGGAAGTATA...ATTTTCCAAGTATTTCTCTTGAAACTGCCAGTGCCTGAACTGTTGGGGCCAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000444303.6
CDS-3UTR GCA 90 bp AAGGAACAGAGATCATCTAGTCCTGTGCTTTTTGAAGTTCTTCGTTCAAATGAATTCAGCTTGGGAAACTaGCGCGGCATCTCAGCGGGT +
Preference number: 4 (lower is better)
Translates to: KEQRSSSPVLFEVLRSNEFSLGN*RGISAG
Trigger: ACCCGCTGAGATGCCGCGGCAGTTTCCCAAGCTGAA...TTCATTTGAACGAAGAACTTCAAAAAGCACAGGACTAGATGATCTCTGTTCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396554.7
CDS-3UTR GCA 90 bp GACAGGAAGCTGAGCTCATTGCATAAGGTCTCATATCGGAATGCCATCCGGATCACTTTTCTTTCTTTTTaGGGTCTCCACAGACTTCTG +
Preference number: 4 (lower is better)
Translates to: DRKLSSLHKVSYRNAIRITFLSF*GLHRLL
Trigger: CAGAAGTCTGTGGAGACCGCAAAAAGAAAGAAAAGT...GATCCGGATGGCATTCCGATATGAGACCTTATGCAATGAGCTCAGCTTCCTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534047.5
CDS-3UTR GCA 90 bp ATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATCATACACAAAGAGGATaGCCCCCTGCATGTGGACCA +
Preference number: 4 (lower is better)
Translates to: IPKEKSPSCYSEILTSEHHTQRG*PPACGP
Trigger: TGGTCCACATGCAGGGGGGCATCCTCTTTGTGTATG...ATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR GCA 90 bp GAAGAAACCAAGACTCAGAATAGGAGTGGCTGTTTTCATGAGTACATTTGGCTTCTGTGCGGCTCCTGGTaGTCCAGCATCTTCTTGTTA +
Preference number: 4 (lower is better)
Translates to: EETKTQNRSGCFHEYIWLLCGSW*SSIFLL
Trigger: TAACAAGAAGATGCTGGAGCACCAGGAGCCGCACAG...AAGCCAAATGTACTCATGAAAACAGCCACTCCTATTCTGAGTCTTGGTTTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
CDS-3UTR GCA 90 bp GAAGAAACCAAGACTCAGAATAGGAGTGGCTGTTTTCATGAGTACATTTGGCTTGATGCTTTTGGTTCATaGAGGCGGCCGCATGGATGT +
Preference number: 4 (lower is better)
Translates to: EETKTQNRSGCFHEYIWLDAFGS*RRPHGC
Trigger: ACATCCATGCGGCCGCCTGCATGAACCAAAAGCATC...AAGCCAAATGTACTCATGAAAACAGCCACTCCTATTCTGAGTCTTGGTTTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
CDS-3UTR GCA 90 bp TCCCAGATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTTCCGTCTGGTATGTGTaGTTGATGAAGCGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: SQIPKEKSPSCYSEILTSSVWYV*LMKRSR
Trigger: TCTGCTGCGCTTCATCAAGCACACATACCAGACGGA...ACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGGGATCTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR GCA 90 bp CTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATTTCCGTCTGGTATGTGTaGTTGATGAAGCGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: LISECHPDLSHICLSNIISVWYV*LMKRSR
Trigger: TCTGCTGCGCTTCATCAAGCACACATACCAGACGGA...AATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529834.5
ENST00000534047.5
CDS-3UTR GCA 90 bp TATAGACAAGTGCTCAGCTCCCAGATCCCCAAGGAGAAGTCACCATCTTGTTACGTGGAAAGAGAAACATaGAGTCCCTTGTGTAGGAAT +
Preference number: 4 (lower is better)
Translates to: YRQVLSSQIPKEKSPSCYVERET*SPLCRN
Trigger: ATTCCTACACAAGGGACTGCATGTTTCTCTTTCCAC...GTAACAAGATGGTGACTTCTCCTTGGGGATCTGGGAGCTGAGCACTTGTCTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR GCA 90 bp TTTGACCTAAATATGTCACTGGGGGACAGCAAAGACTCGCTTGTCAGGTGGATCGTGGAAAGAGAAACATaGAGTCCCTTGTGTAGGAAT +
Preference number: 4 (lower is better)
Translates to: FDLNMSLGDSKDSLVRWIVERET*SPLCRN
Trigger: ATTCCTACACAAGGGACTGCATGTTTCTCTTTCCAC...GATCCACCTGACAAGCGAGTCTTTGCTGTCCCCCAGTGACATATTTAGGTCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534047.5
CDS-3UTR GCA 90 bp GCACCTACTACATACCAGGCACTAGTAACACAGATAAAGAGTACACTGATAAAGGGTCTCATATCGGAATaGCATCCGGATCTGAGCCAC +
Preference number: 4 (lower is better)
Translates to: APTTYQALVTQIKSTLIKGLISE*HPDLSH
Trigger: GTGGCTCAGATCCGGATGGCATTCCGATATGAGACC...CTTTATCAGTGTACTCTTTATCTGTGTTACTAGTGCCTGGTATGTAGTAGGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396553.6
ENST00000444303.6
CDS-3UTR GCA 90 bp CCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATGTTGGTCTCATATCGGAATaGCATCCGGATCTGAGCCAC +
Preference number: 4 (lower is better)
Translates to: PKEKSPSCYSEILTSEHVGLISE*HPDLSH
Trigger: GTGGCTCAGATCCGGATGGCATTCCGATATGAGACC...AACATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CCA 90 bp CCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATGTTCAGAGATGTTCAGCTTaGGAAACTGCCGCGGCATCT +
Preference number: 4 (lower is better)
Translates to: PKEKSPSCYSEILTSEHVQRCSA*ETAAAS
Trigger: AGATGCCGCGGCAGTTTCCCAAGCTGAACATCTCTG...AACATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CCA 90 bp AAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATGTTAACGATGGGGCAGTCCTCTaGGACAGTGAACAGGGACAG +
Preference number: 4 (lower is better)
Translates to: KEKSPSCYSEILTSEHVNDGAVL*DSEQGQ
Trigger: CTGTCCCTGTTCACTGTCCCAGAGGACTGCCCCATC...GTTAACATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CCA 90 bp AAGGAACAGAGATCATCTAGTCCTGTGCTTTTTGAAGTTCTTCGTTCAAATGAACTTCCTTTTGCCCGATaGGGCAGTCCTCTGGGACAG +
Preference number: 4 (lower is better)
Translates to: KEQRSSSPVLFEVLRSNELPFAR*GSPLGQ
Trigger: CTGTCCCAGAGGACTGCCCCATCGGGCAAAAGGAAG...TTCATTTGAACGAAGAACTTCAAAAAGCACAGGACTAGATGATCTCTGTTCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
CDS-3UTR CCA 90 bp AAAACACAATTTGTCAAGAAGGAAGTCTTCCATCTTAACTCCTTCAAAGTAGCCCTTCCTTTTGCCCGATaGGGCAGTCCTCTGGGACAG +
Preference number: 4 (lower is better)
Translates to: KTQFVKKEVFHLNSFKVALPFAR*GSPLGQ
Trigger: CTGTCCCAGAGGACTGCCCCATCGGGCAAAAGGAAG...GGCTACTTTGAAGGAGTTAAGATGGAAGACTTCCTTCTTGACAAATTGTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR CCA 90 bp AAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATGTTAACCTTCCTTTTGCCCGATaGGGCAGTCCTCTGGGACAG +
Preference number: 4 (lower is better)
Translates to: KEKSPSCYSEILTSEHVNLPFAR*GSPLGQ
Trigger: CTGTCCCAGAGGACTGCCCCATCGGGCAAAAGGAAG...GTTAACATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CCA 90 bp CAGATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCTTCCAATCTTGCTGTaGCGGCATTTGCAGAGACAG +
Preference number: 4 (lower is better)
Translates to: QIPKEKSPSCYSEILTSELPILL*RHLQRQ
Trigger: CTGTCTCTGCAAATGCCGCCACAGCAAGATTGGAAG...CTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGGGATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CCA 90 bp CTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATTCTTCCAATCTTGCTGTaGCGGCATTTGCAGAGACAG +
Preference number: 4 (lower is better)
Translates to: LISECHPDLSHICLSNIILPILL*RHLQRQ
Trigger: CTGTCTCTGCAAATGCCGCCACAGCAAGATTGGAAG...AATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529834.5
ENST00000534047.5
CDS-3UTR CCA 90 bp GAACAGAGATCATCTAGTCCTGTGCTTTTTGAAGTTCTTCGTTCAAATGAAAATACCAGTAGGCCAGGTTaGGCCACTCCTCAGGACTGC +
Preference number: 4 (lower is better)
Translates to: EQRSSSPVLFEVLRSNENTSRPG*ATPQDC
Trigger: GCAGTCCTGAGGAGTGGCCCAACCTGGCCTACTGGT...ATTTTCATTTGAACGAAGAACTTCAAAAAGCACAGGACTAGATGATCTCTGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
CDS-3UTR CCA 90 bp ATTTCTTCAGAGGCATCCTCTTCACAGAGGAAAGTCCTAGTTCGGAATCTTGACTTGTCGGAAAACATGTaGTCGCTGTGCTTGGACTCA +
Preference number: 4 (lower is better)
Translates to: ISSEASSSQRKVLVRNLDLSENM*SLCLDS
Trigger: TGAGTCCAAGCACAGCGACCACATGTTTTCCGACAA...GTCAAGATTCCGAACTAGGACTTTCCTCTGTGAAGAGGATGCCTCTGAAGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CCA 90 bp AAATTAGGAACAAGTATAGACAAGTGCTCAGCTCCCAGATCCCCAAGGAGAAGTTTGTCGGAAAACATGTaGTCGCTGTGCTTGGACTCA +
Preference number: 4 (lower is better)
Translates to: KLGTSIDKCSAPRSPRRSLSENM*SLCLDS
Trigger: TGAGTCCAAGCACAGCGACCACATGTTTTCCGACAA...ACTTCTCCTTGGGGATCTGGGAGCTGAGCACTTGTCTATACTTGTTCCTAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR CCA 90 bp AAGGAACAGAGATCATCTAGTCCTGTGCTTTTTGAAGTTCTTCGTTCAAATGAAGTGGGTTCTGCTCACTaGTCCAGACGTCCGGGTTTG +
Preference number: 4 (lower is better)
Translates to: KEQRSSSPVLFEVLRSNEVGSAH*SRRPGL
Trigger: CAAACCCGGACGTCTGGACCAGTGAGCAGAACCCAC...TTCATTTGAACGAAGAACTTCAAAAAGCACAGGACTAGATGATCTCTGTTCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
CDS-3UTR CCA 90 bp AAAACACAATTTGTCAAGAAGGAAGTCTTCCATCTTAACTCCTTCAAAGTAGCCGTGGGTTCTGCTCACTaGTCCAGACGTCCGGGTTTG +
Preference number: 4 (lower is better)
Translates to: KTQFVKKEVFHLNSFKVAVGSAH*SRRPGL
Trigger: CAAACCCGGACGTCTGGACCAGTGAGCAGAACCCAC...GGCTACTTTGAAGGAGTTAAGATGGAAGACTTCCTTCTTGACAAATTGTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR CCA 90 bp CCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATGTTGTAGTAGCTGTAGGGTaGGTTCTGCTCACTGGTCCA +
Preference number: 4 (lower is better)
Translates to: PKEKSPSCYSEILTSEHVVVAVG*VLLTGP
Trigger: TGGACCAGTGAGCAGAACCCACCCTACAGCTACTAC...AACATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CCA 90 bp GAACAGAGATCATCTAGTCCTGTGCTTTTTGAAGTTCTTCGTTCAAATGAAAATAAGGCAGACACCAGGTaGGTGATGGAGCCGGCTTCC +
Preference number: 4 (lower is better)
Translates to: EQRSSSPVLFEVLRSNENKADTR*VMEPAS
Trigger: GGAAGCCGGCTCCATCACCCACCTGGTGTCTGCCTT...ATTTTCATTTGAACGAAGAACTTCAAAAAGCACAGGACTAGATGATCTCTGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
CDS-3UTR CCA 90 bp GAAGAAACCAAGACTCAGAATAGGAGTGGCTGTTTTCATGAGTACATTTGGCTTTTGAGGAGCAGCCCGTaGGAAATGTTGTCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: EETKTQNRSGCFHEYIWLLRSSP*EMLSAV
Trigger: CACTGCTGACAACATTTCCCACGGGCTGCTCCTCAA...AAGCCAAATGTACTCATGAAAACAGCCACTCCTATTCTGAGTCTTGGTTTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
CDS-3UTR CCA 90 bp TCCCAGATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGCATGGGGTCATCGGTaGAAAGAGAAACATGCAGTC +
Preference number: 4 (lower is better)
Translates to: SQIPKEKSPSCYSEILTSAWGHR*KEKHAV
Trigger: GACTGCATGTTTCTCTTTCCACCGATGACCCCATGC...ACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGGGATCTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CCA 90 bp CAGATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGGCATGGGGTCATCGGTaGAAAGAGAAACATGCAGTC +
Preference number: 4 (lower is better)
Translates to: QIPKEKSPSCYSEILTSEAWGHR*KEKHAV
Trigger: GACTGCATGTTTCTCTTTCCACCGATGACCCCATGC...CTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGGGATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CCA 90 bp CTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATTGCATGGGGTCATCGGTaGAAAGAGAAACATGCAGTC +
Preference number: 4 (lower is better)
Translates to: LISECHPDLSHICLSNIIAWGHR*KEKHAV
Trigger: GACTGCATGTTTCTCTTTCCACCGATGACCCCATGC...AATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529744.1
ENST00000529834.5
ENST00000534047.5
CDS-3UTR CCA 90 bp CATCCGAGCAAAGTACTCTCCTCCCAGATAGTTTTCAGTTTTCAAATACAGGTCGCATGGGGTCATCGGTaGAAAGAGAAACATGCAGTC +
Preference number: 4 (lower is better)
Translates to: HPSKVLSSQIVFSFQIQVAWGHR*KEKHAV
Trigger: GACTGCATGTTTCTCTTTCCACCGATGACCCCATGC...GACCTGTATTTGAAAACTGAAAACTATCTGGGAGGAGAGTACTTTGCTCGGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000534047.5
3UTR CAA 72 bp TCTGATTTCATAGCATCAGACAGGAAGCTGAGCTCATaGCATAAGGTCTCATATCGGAATGCCATCCGGATC +
Preference number: 4 (lower is better)
Translates to: SDFIASDRKLSS*HKVSYRNAIRI
Trigger: GATCCGGATGGCATTCCGATATGAGACCTTATGCAATGAGCTCAGCTTCCTGTCTGATGCTATGAAATCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529744.1
ENST00000534047.5
CDS-3UTR TCA 90 bp CTACCAATTAGCCTACCTGGGCCAATGGAGAAAAGTATGGCAGAAAACCACATGTCGTTTAACATCTCATaGAGGCTGAACTTGGATTCC +
Preference number: 4 (lower is better)
Translates to: LPISLPGPMEKSMAENHMSFNIS*RLNLDS
Trigger: GGAATCCAAGTTCAGCCTTCATGAGATGTTAAACGA...CATGTGGTTTTCTGCCATACTTTTCTCCATTGGCCCAGGTAGGCTAATTGGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR TCA 90 bp GAACAGAGATCATCTAGTCCTGTGCTTTTTGAAGTTCTTCGTTCAAATGAAAATCCCGGGCAACCTCCTTaGCCATCCGAGCAAAGTACT +
Preference number: 4 (lower is better)
Translates to: EQRSSSPVLFEVLRSNENPGQPP*PSEQST
Trigger: AGTACTTTGCTCGGATGGTCAAGGAGGTTGCCCGGG...ATTTTCATTTGAACGAAGAACTTCAAAAAGCACAGGACTAGATGATCTCTGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
CDS-3UTR TCA 90 bp GAACAGAGATCATCTAGTCCTGTGCTTTTTGAAGTTCTTCGTTCAAATGAAAATGGAGAGCCGTGGCTCTaGGTACTGGTACTTGCTCTC +
Preference number: 4 (lower is better)
Translates to: EQRSSSPVLFEVLRSNENGEPWL*VLVLAL
Trigger: GAGAGCAAGTACCAGTACTCAGAGCCACGGCTCTCC...ATTTTCATTTGAACGAAGAACTTCAAAAAGCACAGGACTAGATGATCTCTGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
CDS-3UTR TCA 90 bp AAGGAACAGAGATCATCTAGTCCTGTGCTTTTTGAAGTTCTTCGTTCAAATGAAAGACCTTGTGCTGGATaGACCAGTAGGCCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: KEQRSSSPVLFEVLRSNERPCAG*TSRPGW
Trigger: CCAACCTGGCCTACTGGTTCATCCAGCACAAGGTCT...TTCATTTGAACGAAGAACTTCAAAAAGCACAGGACTAGATGATCTCTGTTCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
CDS-3UTR TCA 90 bp CCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATGTTAAATGTTGTCAGCAGTaGGGAAGGCAGACACCAGGT +
Preference number: 4 (lower is better)
Translates to: PKEKSPSCYSEILTSEHVKCCQQ*GRQTPG
Trigger: ACCTGGTGTCTGCCTTCCTCACTGCTGACAACATTT...AACATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR TCA 90 bp AAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATGTTAACATACCGGACTCTTCTTaGGGAGCAGCCCGTGGGAAA +
Preference number: 4 (lower is better)
Translates to: KEKSPSCYSEILTSEHVNIPDSS*GAARGK
Trigger: TTTCCCACGGGCTGCTCCTCAAGAAGAGTCCGGTAT...GTTAACATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR TCA 90 bp CAGATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCTCAGCTTCCACACTTaGGCTGCAATGGCATATTCT +
Preference number: 4 (lower is better)
Translates to: QIPKEKSPSCYSEILTSELSFHT*AAMAYS
Trigger: AGAATATGCCATTGCAGCTCAAGTGTGGAAGCTGAG...CTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGGGATCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR TCA 90 bp TCCCAGATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTCTCAGCTTCCACACTTaGGCTGCAATGGCATATTCT +
Preference number: 4 (lower is better)
Translates to: SQIPKEKSPSCYSEILTSLSFHT*AAMAYS
Trigger: AGAATATGCCATTGCAGCTCAAGTGTGGAAGCTGAG...ACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGGGATCTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR TCA 90 bp CTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATTCATCAGACAGGAAGCTaGGCTCATTGCATAAGGTCT +
Preference number: 4 (lower is better)
Translates to: LISECHPDLSHICLSNIIHQTGS*AHCIRS
Trigger: AGACCTTATGCAATGAGCTCAGCTTCCTGTCTGATG...AATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529744.1
ENST00000534047.5
CDS-3UTR TCA 90 bp TCTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATGGCGGTGATCTCTTCTaGTTTCATAGCATCAGACAG +
Preference number: 4 (lower is better)
Translates to: SHIGMPSGSEPHLSFEYHGGDLF*FHSIRQ
Trigger: CTGTCTGATGCTATGAAATCAGAAGAGATCACCGCC...ATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529744.1
ENST00000534047.5
CDS-3UTR TCA 90 bp GTGAAGAAACCAAGACTCAGAATAGGAGTGGCTGTTTTCATGAGTACATTTGGCCCTAGTTCGGAATCTTaGCCACTATTAGCCACAGCA +
Preference number: 4 (lower is better)
Translates to: VKKPRLRIGVAVFMSTFGPSSES*PLLATA
Trigger: TGCTGTGGCTAATAGTGGTCAAGATTCCGAACTAGG...GCCAAATGTACTCATGAAAACAGCCACTCCTATTCTGAGTCTTGGTTTCTTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
CDS-3UTR TCA 90 bp CAGATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCCTAGTTCGGAATCTTaGCCACTATTAGCCACAGCA +
Preference number: 4 (lower is better)
Translates to: QIPKEKSPSCYSEILTSEPSSES*PLLATA
Trigger: TGCTGTGGCTAATAGTGGTCAAGATTCCGAACTAGG...CTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGGGATCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR TCA 90 bp GAAGAAACCAAGACTCAGAATAGGAGTGGCTGTTTTCATGAGTACATTTGGCTTATGTTACTTGGCATCTaGCCAGGGAAAATCCTGGCC +
Preference number: 4 (lower is better)
Translates to: EETKTQNRSGCFHEYIWLMLLGI*PGKILA
Trigger: GGCCAGGATTTTCCCTGGTCAGATGCCAAGTAACAT...AAGCCAAATGTACTCATGAAAACAGCCACTCCTATTCTGAGTCTTGGTTTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
CDS-3UTR TCA 90 bp GCACCTACTACATACCAGGCACTAGTAACACAGATAAAGAGTACACTGATAAAGATGTTACTTGGCATCTaGCCAGGGAAAATCCTGGCC +
Preference number: 4 (lower is better)
Translates to: APTTYQALVTQIKSTLIKMLLGI*PGKILA
Trigger: GGCCAGGATTTTCCCTGGTCAGATGCCAAGTAACAT...CTTTATCAGTGTACTCTTTATCTGTGTTACTAGTGCCTGGTATGTAGTAGGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396553.6
ENST00000444303.6
CDS-3UTR TCA 90 bp ATCCTGGCCCCAACAGTTCAGGCACTGGCAGTTTCAAGAGAAATACTTGGAAAATGCATCCGGTTACAGTaGTTAAAAACACACACACAC +
Preference number: 4 (lower is better)
Translates to: ILAPTVQALAVSREILGKCIRLQ*LKTHTH
Trigger: GTGTGTGTGTGTTTTTAATCACTGTAACCGGATGCA...TTTTCCAAGTATTTCTCTTGAAACTGCCAGTGCCTGAACTGTTGGGGCCAGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
CDS-3UTR TCA 90 bp CAGATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATAGTCCTCCAAAGTaGTCTTTTTGCGGTCTCCAC +
Preference number: 4 (lower is better)
Translates to: QIPKEKSPSCYSEILTSEHSPPK*SFCGLH
Trigger: GTGGAGACCGCAAAAAGATCACTTTGGAGGACTATG...CTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGGGATCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444303.6
CDS-3UTR TCA 90 bp AAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATGTTAACATCTGTGAGCAGCAGTaGGCCAGAGCAGGAAAAGCC +
Preference number: 4 (lower is better)
Translates to: KEKSPSCYSEILTSEHVNICEQQ*ARAGKA
Trigger: GGCTTTTCCTGCTCTGGCTCACTGCTGCTCACAGAT...GTTAACATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528723.5
CDS-3UTR GCA 90 bp AAAACACAATTTGTCAAGAAGGAAGTCTTCCATCTTAACTCCTTCAAAGTAGCCGCCAGGAGCCGGACTTaGTCATCCACTTCAGAGATG +
Preference number: 4 (lower is better)
Translates to: KTQFVKKEVFHLNSFKVAARSRT*SSTSEM
Trigger: CATCTCTGAAGTGGATGAGCAAGTCCGGCTCCTGGC...GGCTACTTTGAAGGAGTTAAGATGGAAGACTTCCTTCTTGACAAATTGTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR GCA 90 bp AAGGAACAGAGATCATCTAGTCCTGTGCTTTTTGAAGTTCTTCGTTCAAATGAAGGGACAGGGCATCTTTaGTGTCCTCTTCTCGGAGCA +
Preference number: 4 (lower is better)
Translates to: KEQRSSSPVLFEVLRSNEGTGHL*CPLLGA
Trigger: TGCTCCGAGAAGAGGACAGCAAAGATGCCCTGTCCC...TTCATTTGAACGAAGAACTTCAAAAAGCACAGGACTAGATGATCTCTGTTCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
CDS-3UTR GCA 90 bp AAAACACAATTTGTCAAGAAGGAAGTCTTCCATCTTAACTCCTTCAAAGTAGCCTCCTTGGCTTCCTTTTaGCCGATGGGGCAGTCCTCT +
Preference number: 4 (lower is better)
Translates to: KTQFVKKEVFHLNSFKVASLASF*PMGQSS
Trigger: AGAGGACTGCCCCATCGGGCAAAAGGAAGCCAAGGA...GGCTACTTTGAAGGAGTTAAGATGGAAGACTTCCTTCTTGACAAATTGTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR GCA 90 bp AGTATAGACAAGTGCTCAGCTCCCAGATCCCCAAGGAGAAGTCACCATCTTGTTACTTTTCTTTCTTTTTaGGGTCTCCACAGACTTCTG +
Preference number: 4 (lower is better)
Translates to: SIDKCSAPRSPRRSHHLVTFLSF*GLHRLL
Trigger: CAGAAGTCTGTGGAGACCGCAAAAAGAAAGAAAAGT...AACAAGATGGTGACTTCTCCTTGGGGATCTGGGAGCTGAGCACTTGTCTATACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000529507.5
CDS-3UTR GCA 90 bp GAACAGAGATCATCTAGTCCTGTGCTTTTTGAAGTTCTTCGTTCAAATGAAAATTGCTGTGGCGGCATTTaGAGAGACAGGGACTGGGAC +
Preference number: 4 (lower is better)
Translates to: EQRSSSPVLFEVLRSNENCCGGI*RDRDWD
Trigger: GTCCCAGTCCCTGTCTCTGCAAATGCCGCCACAGCA...ATTTTCATTTGAACGAAGAACTTCAAAAAGCACAGGACTAGATGATCTCTGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396553.6
ENST00000396554.7
CDS-3UTR GCA 90 bp ATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATTCCGTCTGGTATGTGTaGTTGATGAAGCGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: IPKEKSPSCYSEILTSEHSVWYV*LMKRSR
Trigger: TCTGCTGCGCTTCATCAAGCACACATACCAGACGGA...ATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR GCA 90 bp AAAACACAATTTGTCAAGAAGGAAGTCTTCCATCTTAACTCCTTCAAAGTAGCCCACACAGGTCGCAGGTaGTCAGCTTCCACACTTGAG +
Preference number: 4 (lower is better)
Translates to: KTQFVKKEVFHLNSFKVAHTGRR*SASTLE
Trigger: CTCAAGTGTGGAAGCTGAGCACCTGCGACCTGTGTG...GGCTACTTTGAAGGAGTTAAGATGGAAGACTTCCTTCTTGACAAATTGTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR GCA 90 bp AAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATGTTAACCACACAGGTCGCAGGTaGTCAGCTTCCACACTTGAG +
Preference number: 4 (lower is better)
Translates to: KEKSPSCYSEILTSEHVNHTGRR*SASTLE
Trigger: CTCAAGTGTGGAAGCTGAGCACCTGCGACCTGTGTG...GTTAACATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR GCA 90 bp CAGATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGACAAGTATAGACAAGTaGTCAGCTCCCAGATCCCCA +
Preference number: 4 (lower is better)
Translates to: QIPKEKSPSCYSEILTSETSIDK*SAPRSP
Trigger: TGGGGATCTGGGAGCTGAGCACTTGTCTATACTTGT...CTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGGGATCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR GCA 90 bp ATTTCTTCAGAGGCATCCTCTTCACAGAGGAAAGTCCTAGTTCGGAATCTTGACAGGAGGTCTCTGTTTTaGATATCTGTGAGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: ISSEASSSQRKVLVRNLDRRSLF*ISVSSS
Trigger: ACTGCTGCTCACAGATATGCAAAACAGAGACCTCCT...GTCAAGATTCCGAACTAGGACTTTCCTCTGTGAAGAGGATGCCTCTGAAGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528723.5
CDS-3UTR CCA 90 bp GAACAGAGATCATCTAGTCCTGTGCTTTTTGAAGTTCTTCGTTCAAATGAAAATGATGGGGCAGTCCTCTaGGACAGTGAACAGGGACAG +
Preference number: 4 (lower is better)
Translates to: EQRSSSPVLFEVLRSNENDGAVL*DSEQGQ
Trigger: CTGTCCCTGTTCACTGTCCCAGAGGACTGCCCCATC...ATTTTCATTTGAACGAAGAACTTCAAAAAGCACAGGACTAGATGATCTCTGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
CDS-3UTR CCA 90 bp CTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATTTGCAGAGACAGGGACTaGGACCGAATCATCTTGAAA +
Preference number: 4 (lower is better)
Translates to: LISECHPDLSHICLSNIICRDRD*DRIILK
Trigger: TTTCAAGATGATTCGGTCCCAGTCCCTGTCTCTGCA...AATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529834.5
ENST00000534047.5
CDS-3UTR CCA 90 bp AAGGAACAGAGATCATCTAGTCCTGTGCTTTTTGAAGTTCTTCGTTCAAATGAACCTTGGCCAGACTCTTaGCTGCCTGCTCATAGTCCT +
Preference number: 4 (lower is better)
Translates to: KEQRSSSPVLFEVLRSNEPWPDS*LPAHSP
Trigger: AGGACTATGAGCAGGCAGCCAAGAGTCTGGCCAAGG...TTCATTTGAACGAAGAACTTCAAAAAGCACAGGACTAGATGATCTCTGTTCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
CDS-3UTR CCA 90 bp AAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATGTTAACCCTTGGCCAGACTCTTaGCTGCCTGCTCATAGTCCT +
Preference number: 4 (lower is better)
Translates to: KEKSPSCYSEILTSEHVNPWPDS*LPAHSP
Trigger: AGGACTATGAGCAGGCAGCCAAGAGTCTGGCCAAGG...GTTAACATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CCA 90 bp AAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATGTTAACGGATCATTAGGGCCTTaGCCAGACTCTTGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: KEKSPSCYSEILTSEHVNGSLGP*PDSWLP
Trigger: AGGCAGCCAAGAGTCTGGCCAAGGCCCTAATGATCC...GTTAACATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CCA 90 bp AAGGAACAGAGATCATCTAGTCCTGTGCTTTTTGAAGTTCTTCGTTCAAATGAACCAAGTAATCCAGGTTaGGGGGTGCATCATCCAGGC +
Preference number: 4 (lower is better)
Translates to: KEQRSSSPVLFEVLRSNEPSNPG*GVHHPG
Trigger: GCCTGGATGATGCACCCCCCAACCTGGATTACTTGG...TTCATTTGAACGAAGAACTTCAAAAAGCACAGGACTAGATGATCTCTGTTCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
CDS-3UTR CCA 90 bp GAACAGAGATCATCTAGTCCTGTGCTTTTTGAAGTTCTTCGTTCAAATGAAAATAGGCTGTGCGGCTCCTaGTGCTCCAGCATCTTCTTG +
Preference number: 4 (lower is better)
Translates to: EQRSSSPVLFEVLRSNENRLCGS*CSSIFL
Trigger: CAAGAAGATGCTGGAGCACCAGGAGCCGCACAGCCT...ATTTTCATTTGAACGAAGAACTTCAAAAAGCACAGGACTAGATGATCTCTGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
CDS-3UTR CCA 90 bp AAAACACAATTTGTCAAGAAGGAAGTCTTCCATCTTAACTCCTTCAAAGTAGCCATGCAGGCGGCCGCATaGATGTGTGTGTCCACCTTT +
Preference number: 4 (lower is better)
Translates to: KTQFVKKEVFHLNSFKVAMQAAA*MCVSTF
Trigger: AAAGGTGGACACACACATCCATGCGGCCGCCTGCAT...GGCTACTTTGAAGGAGTTAAGATGGAAGACTTCCTTCTTGACAAATTGTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR CCA 90 bp AAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATGTTAACCGTGGCTCTGAGTACTaGTACTTGCTCTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: KEKSPSCYSEILTSEHVNRGSEY*YLLSSS
Trigger: GCTGGAGGAGAGCAAGTACCAGTACTCAGAGCCACG...GTTAACATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CCA 90 bp CTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATTTTGTCGGAAAACATGTaGTCGCTGTGCTTGGACTCA +
Preference number: 4 (lower is better)
Translates to: LISECHPDLSHICLSNIILSENM*SLCLDS
Trigger: TGAGTCCAAGCACAGCGACCACATGTTTTCCGACAA...AATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529834.5
ENST00000534047.5
CDS-3UTR CCA 90 bp TCTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATTTGTCGGAAAACATGTaGTCGCTGTGCTTGGACTCA +
Preference number: 4 (lower is better)
Translates to: SHIGMPSGSEPHLSFEYHLSENM*SLCLDS
Trigger: TGAGTCCAAGCACAGCGACCACATGTTTTCCGACAA...ATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534047.5
CDS-3UTR CCA 90 bp AAATTAGGAACAAGTATAGACAAGTGCTCAGCTCCCAGATCCCCAAGGAGAAGTCCCTCAGAGGGTTCTTaGAATATTCGAGGAACAAAC +
Preference number: 4 (lower is better)
Translates to: KLGTSIDKCSAPRSPRRSPSEGS*NIRGTN
Trigger: GTTTGTTCCTCGAATATTCCAAGAACCCTCTGAGGG...ACTTCTCCTTGGGGATCTGGGAGCTGAGCACTTGTCTATACTTGTTCCTAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR CCA 90 bp ATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATGCATGGGGTCATCGGTaGAAAGAGAAACATGCAGTC +
Preference number: 4 (lower is better)
Translates to: IPKEKSPSCYSEILTSEHAWGHR*KEKHAV
Trigger: GACTGCATGTTTCTCTTTCCACCGATGACCCCATGC...ATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CCA 90 bp AAAACACAATTTGTCAAGAAGGAAGTCTTCCATCTTAACTCCTTCAAAGTAGCCGACCAGGGAAAATCCTaGCCCCAACAGTTCAGGCAC +
Preference number: 4 (lower is better)
Translates to: KTQFVKKEVFHLNSFKVADQGKS*PQQFRH
Trigger: GTGCCTGAACTGTTGGGGCCAGGATTTTCCCTGGTC...GGCTACTTTGAAGGAGTTAAGATGGAAGACTTCCTTCTTGACAAATTGTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR CCA 90 bp CAGATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGGCCTACCTGGGCCAATaGAGAAAAGTATGGCAGAAA +
Preference number: 4 (lower is better)
Translates to: QIPKEKSPSCYSEILTSEAYLGQ*RKVWQK
Trigger: TTTCTGCCATACTTTTCTCCATTGGCCCAGGTAGGC...CTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGGGATCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR CCA 90 bp AATGAACAACTACCAATTAGCCTACCTGGGCCAATGGAGAAAAGTATGGCAGAAGCCTACCTGGGCCAATaGAGAAAAGTATGGCAGAAA +
Preference number: 4 (lower is better)
Translates to: NEQLPISLPGPMEKSMAEAYLGQ*RKVWQK
Trigger: TTTCTGCCATACTTTTCTCCATTGGCCCAGGTAGGC...TTCTGCCATACTTTTCTCCATTGGCCCAGGTAGGCTAATTGGTAGTTGTTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR CCA 90 bp CTACCAATTAGCCTACCTGGGCCAATGGAGAAAAGTATGGCAGAAAACCACATGAACTGTTCAACTAGGTaGGCTTCCATTTTCCCAAAC +
Preference number: 4 (lower is better)
Translates to: LPISLPGPMEKSMAENHMNCSTR*ASIFPN
Trigger: GTTTGGGAAAATGGAAGCCCACCTAGTTGAACAGTT...CATGTGGTTTTCTGCCATACTTTTCTCCATTGGCCCAGGTAGGCTAATTGGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000529507.5
3UTR CAA 72 bp TGCAGTCCCTTGTGTAGGAATTCCCTCAGAGGGTTCTaGGAATATTCGAGGAACAAACTGTTGTTGCTAAGA +
Preference number: 4 (lower is better)
Translates to: CSPLCRNSLRGF*EYSRNKLLLLR
Trigger: TCTTAGCAACAACAGTTTGTTCCTCGAATATTCCAAGAACCCTCTGAGGGAATTCCTACACAAGGGACTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534047.5
CDS-3UTR TCA 90 bp ATTTCTTCAGAGGCATCCTCTTCACAGAGGAAAGTCCTAGTTCGGAATCTTGACACATCTCATGAAGGCTaGACTTGGATTCCAGAAAGT +
Preference number: 4 (lower is better)
Translates to: ISSEASSSQRKVLVRNLDTSHEG*TWIPES
Trigger: ACTTTCTGGAATCCAAGTTCAGCCTTCATGAGATGT...GTCAAGATTCCGAACTAGGACTTTCCTCTGTGAAGAGGATGCCTCTGAAGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR TCA 90 bp ATTTCTTCAGAGGCATCCTCTTCACAGAGGAAAGTCCTAGTTCGGAATCTTGACTCGTTTAACATCTCATaGAGGCTGAACTTGGATTCC +
Preference number: 4 (lower is better)
Translates to: ISSEASSSQRKVLVRNLDSFNIS*RLNLDS
Trigger: GGAATCCAAGTTCAGCCTTCATGAGATGTTAAACGA...GTCAAGATTCCGAACTAGGACTTTCCTCTGTGAAGAGGATGCCTCTGAAGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR TCA 90 bp AGGTCTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATTCGTTTAACATCTCATaGAGGCTGAACTTGGATTCC +
Preference number: 4 (lower is better)
Translates to: RSHIGMPSGSEPHLSFEYSFNIS*RLNLDS
Trigger: GGAATCCAAGTTCAGCCTTCATGAGATGTTAAACGA...ATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAGACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534047.5
CDS-3UTR TCA 90 bp GCACCTACTACATACCAGGCACTAGTAACACAGATAAAGAGTACACTGATAAAGCCTAGTTCGGAATCTTaGCCACTATTAGCCACAGCA +
Preference number: 4 (lower is better)
Translates to: APTTYQALVTQIKSTLIKPSSES*PLLATA
Trigger: TGCTGTGGCTAATAGTGGTCAAGATTCCGAACTAGG...CTTTATCAGTGTACTCTTTATCTGTGTTACTAGTGCCTGGTATGTAGTAGGTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396553.6
ENST00000444303.6
CDS-3UTR TCA 90 bp GGTGAAGAAACCAAGACTCAGAATAGGAGTGGCTGTTTTCATGAGTACATTTGGCAGCCATCCAGAGGCTaGAATGAACAACTACCAATT +
Preference number: 4 (lower is better)
Translates to: GEETKTQNRSGCFHEYIWQPSRG*NEQLPI
Trigger: AATTGGTAGTTGTTCATTTCAGCCTCTGGATGGCTG...CCAAATGTACTCATGAAAACAGCCACTCCTATTCTGAGTCTTGGTTTCTTCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
CDS-3UTR GCA 90 bp AAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATGTTAACCATACACAAAGAGGATaGCCCCCTGCATGTGGACCA +
Preference number: 4 (lower is better)
Translates to: KEKSPSCYSEILTSEHVNHTQRG*PPACGP
Trigger: TGGTCCACATGCAGGGGGGCATCCTCTTTGTGTATG...GTTAACATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR GCA 90 bp AAAACACAATTTGTCAAGAAGGAAGTCTTCCATCTTAACTCCTTCAAAGTAGCCCTGTGCGGCTCCTGGTaGTCCAGCATCTTCTTGTTA +
Preference number: 4 (lower is better)
Translates to: KTQFVKKEVFHLNSFKVALCGSW*SSIFLL
Trigger: TAACAAGAAGATGCTGGAGCACCAGGAGCCGCACAG...GGCTACTTTGAAGGAGTTAAGATGGAAGACTTCCTTCTTGACAAATTGTGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR GCA 90 bp AAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATGTTAACGATGCTTTTGGTTCATaGAGGCGGCCGCATGGATGT +
Preference number: 4 (lower is better)
Translates to: KEKSPSCYSEILTSEHVNDAFGS*RRPHGC
Trigger: ACATCCATGCGGCCGCCTGCATGAACCAAAAGCATC...GTTAACATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR GCA 90 bp AAATTAGGAACAAGTATAGACAAGTGCTCAGCTCCCAGATCCCCAAGGAGAAGTGTGGAAAGAGAAACATaGAGTCCCTTGTGTAGGAAT +
Preference number: 4 (lower is better)
Translates to: KLGTSIDKCSAPRSPRRSVERET*SPLCRN
Trigger: ATTCCTACACAAGGGACTGCATGTTTCTCTTTCCAC...ACTTCTCCTTGGGGATCTGGGAGCTGAGCACTTGTCTATACTTGTTCCTAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR GCA 90 bp CCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATGTTACAAGTATAGACAAGTaGTCAGCTCCCAGATCCCCA +
Preference number: 4 (lower is better)
Translates to: PKEKSPSCYSEILTSEHVTSIDK*SAPRSP
Trigger: TGGGGATCTGGGAGCTGAGCACTTGTCTATACTTGT...AACATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR CCA 90 bp AAAACACAATTTGTCAAGAAGGAAGTCTTCCATCTTAACTCCTTCAAAGTAGCCCAGAGATGTTCAGCTTaGGAAACTGCCGCGGCATCT +
Preference number: 4 (lower is better)
Translates to: KTQFVKKEVFHLNSFKVAQRCSA*ETAAAS
Trigger: AGATGCCGCGGCAGTTTCCCAAGCTGAACATCTCTG...GGCTACTTTGAAGGAGTTAAGATGGAAGACTTCCTTCTTGACAAATTGTGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR CCA 90 bp GAAGAAACCAAGACTCAGAATAGGAGTGGCTGTTTTCATGAGTACATTTGGCTTTGCAGAGACAGGGACTaGGACCGAATCATCTTGAAA +
Preference number: 4 (lower is better)
Translates to: EETKTQNRSGCFHEYIWLCRDRD*DRIILK
Trigger: TTTCAAGATGATTCGGTCCCAGTCCCTGTCTCTGCA...AAGCCAAATGTACTCATGAAAACAGCCACTCCTATTCTGAGTCTTGGTTTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396553.6
ENST00000396554.7
CDS-3UTR CCA 90 bp CCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATGTTTGCAGAGACAGGGACTaGGACCGAATCATCTTGAAA +
Preference number: 4 (lower is better)
Translates to: PKEKSPSCYSEILTSEHVCRDRD*DRIILK
Trigger: TTTCAAGATGATTCGGTCCCAGTCCCTGTCTCTGCA...AACATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CCA 90 bp ATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATTTGTCGGAAAACATGTaGTCGCTGTGCTTGGACTCA +
Preference number: 4 (lower is better)
Translates to: IPKEKSPSCYSEILTSEHLSENM*SLCLDS
Trigger: TGAGTCCAAGCACAGCGACCACATGTTTTCCGACAA...ATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CCA 90 bp CCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATGTTTTGTCGGAAAACATGTaGTCGCTGTGCTTGGACTCA +
Preference number: 4 (lower is better)
Translates to: PKEKSPSCYSEILTSEHVLSENM*SLCLDS
Trigger: TGAGTCCAAGCACAGCGACCACATGTTTTCCGACAA...AACATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CCA 90 bp AAAACACAATTTGTCAAGAAGGAAGTCTTCCATCTTAACTCCTTCAAAGTAGCCCCAGACGTCCGGGTTTaGGCTCTTGTCGGAAAACAT +
Preference number: 4 (lower is better)
Translates to: KTQFVKKEVFHLNSFKVAPDVRV*ALVGKH
Trigger: ATGTTTTCCGACAAGAGCCCAAACCCGGACGTCTGG...GGCTACTTTGAAGGAGTTAAGATGGAAGACTTCCTTCTTGACAAATTGTGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR CCA 90 bp AAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATGTTAACCCAGACGTCCGGGTTTaGGCTCTTGTCGGAAAACAT +
Preference number: 4 (lower is better)
Translates to: KEKSPSCYSEILTSEHVNPDVRV*ALVGKH
Trigger: ATGTTTTCCGACAAGAGCCCAAACCCGGACGTCTGG...GTTAACATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CCA 90 bp AAGGAACAGAGATCATCTAGTCCTGTGCTTTTTGAAGTTCTTCGTTCAAATGAAGTAGTAGCTGTAGGGTaGGTTCTGCTCACTGGTCCA +
Preference number: 4 (lower is better)
Translates to: KEQRSSSPVLFEVLRSNEVVAVG*VLLTGP
Trigger: TGGACCAGTGAGCAGAACCCACCCTACAGCTACTAC...TTCATTTGAACGAAGAACTTCAAAAAGCACAGGACTAGATGATCTCTGTTCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
CDS-3UTR CCA 90 bp AAAACACAATTTGTCAAGAAGGAAGTCTTCCATCTTAACTCCTTCAAAGTAGCCGTAGTAGCTGTAGGGTaGGTTCTGCTCACTGGTCCA +
Preference number: 4 (lower is better)
Translates to: KTQFVKKEVFHLNSFKVAVVAVG*VLLTGP
Trigger: TGGACCAGTGAGCAGAACCCACCCTACAGCTACTAC...GGCTACTTTGAAGGAGTTAAGATGGAAGACTTCCTTCTTGACAAATTGTGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR CCA 90 bp TCCCAGATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTCCCTCAGAGGGTTCTTaGAATATTCGAGGAACAAAC +
Preference number: 4 (lower is better)
Translates to: SQIPKEKSPSCYSEILTSPSEGS*NIRGTN
Trigger: GTTTGTTCCTCGAATATTCCAAGAACCCTCTGAGGG...ACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGGGATCTGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CCA 90 bp CTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATTCCCTCAGAGGGTTCTTaGAATATTCGAGGAACAAAC +
Preference number: 4 (lower is better)
Translates to: LISECHPDLSHICLSNIIPSEGS*NIRGTN
Trigger: GTTTGTTCCTCGAATATTCCAAGAACCCTCTGAGGG...AATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529744.1
ENST00000529834.5
ENST00000534047.5
CDS-3UTR CCA 90 bp TATAGACAAGTGCTCAGCTCCCAGATCCCCAAGGAGAAGTCACCATCTTGTTACCAATGGAGAAAAGTATaGCAGAAAACCACATGTTAC +
Preference number: 4 (lower is better)
Translates to: YRQVLSSQIPKEKSPSCYQWRKV*QKTTCY
Trigger: GTAACATGTGGTTTTCTGCCATACTTTTCTCCATTG...GTAACAAGATGGTGACTTCTCCTTGGGGATCTGGGAGCTGAGCACTTGTCTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR CCA 90 bp TATAGACAAGTGCTCAGCTCCCAGATCCCCAAGGAGAAGTCACCATCTTGTTACTTTCATGAGTACATTTaGCTTCCAACTAGAAAGAGG +
Preference number: 4 (lower is better)
Translates to: YRQVLSSQIPKEKSPSCYFHEYI*LPTRKR
Trigger: CCTCTTTCTAGTTGGAAGCCAAATGTACTCATGAAA...GTAACAAGATGGTGACTTCTCCTTGGGGATCTGGGAGCTGAGCACTTGTCTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
CDS-3UTR TCA 90 bp GTGAAGAAACCAAGACTCAGAATAGGAGTGGCTGTTTTCATGAGTACATTTGGCACATCTCATGAAGGCTaGACTTGGATTCCAGAAAGT +
Preference number: 4 (lower is better)
Translates to: VKKPRLRIGVAVFMSTFGTSHEG*TWIPES
Trigger: ACTTTCTGGAATCCAAGTTCAGCCTTCATGAGATGT...GCCAAATGTACTCATGAAAACAGCCACTCCTATTCTGAGTCTTGGTTTCTTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
CDS-3UTR TCA 90 bp CAGATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGACATCTCATGAAGGCTaGACTTGGATTCCAGAAAGT +
Preference number: 4 (lower is better)
Translates to: QIPKEKSPSCYSEILTSETSHEG*TWIPES
Trigger: ACTTTCTGGAATCCAAGTTCAGCCTTCATGAGATGT...CTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGGGATCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR TCA 90 bp CTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATTACATCTCATGAAGGCTaGACTTGGATTCCAGAAAGT +
Preference number: 4 (lower is better)
Translates to: LISECHPDLSHICLSNIITSHEG*TWIPES
Trigger: ACTTTCTGGAATCCAAGTTCAGCCTTCATGAGATGT...AATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529834.5
ENST00000534047.5
CDS-3UTR TCA 90 bp CTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATTTCGTTTAACATCTCATaGAGGCTGAACTTGGATTCC +
Preference number: 4 (lower is better)
Translates to: LISECHPDLSHICLSNIISFNIS*RLNLDS
Trigger: GGAATCCAAGTTCAGCCTTCATGAGATGTTAAACGA...AATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529834.5
ENST00000534047.5
CDS-3UTR TCA 90 bp CTACCAATTAGCCTACCTGGGCCAATGGAGAAAAGTATGGCAGAAAACCACATGTACTCTTCAACTCTTTaGACTCGGACATTTCGTTTA +
Preference number: 4 (lower is better)
Translates to: LPISLPGPMEKSMAENHMYSSTL*TRTFRL
Trigger: TAAACGAAATGTCCGAGTTCAAAGAGTTGAAGAGTA...CATGTGGTTTTCTGCCATACTTTTCTCCATTGGCCCAGGTAGGCTAATTGGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR TCA 90 bp TCAGAGGCATCCTCTTCACAGAGGAAAGTCCTAGTTCGGAATCTTGACCACTATTGGCAGCAGCTTCTTTaGCCTAAATATGTCATAAAT +
Preference number: 4 (lower is better)
Translates to: SEASSSQRKVLVRNLDHYWQQLL*PKYVIN
Trigger: ATTTATGACATATTTAGGTCAAAGAAGCTGCTGCCA...ATAGTGGTCAAGATTCCGAACTAGGACTTTCCTCTGTGAAGAGGATGCCTCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR TCA 90 bp TCAGAGGCATCCTCTTCACAGAGGAAAGTCCTAGTTCGGAATCTTGACCACTATAAAGTAGCCCCTTTATaGAATGGAGCTTTGAAATTG +
Preference number: 4 (lower is better)
Translates to: SEASSSQRKVLVRNLDHYKVAPL*NGALKL
Trigger: CAATTTCAAAGCTCCATTTCATAAAGGGGCTACTTT...ATAGTGGTCAAGATTCCGAACTAGGACTTTCCTCTGTGAAGAGGATGCCTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR TCA 90 bp TCCTGGCCCCAACAGTTCAGGCACTGGCAGTTTCAAGAGAAATACTTGGAAAATAAAGTAGCCCCTTTATaGAATGGAGCTTTGAAATTG +
Preference number: 4 (lower is better)
Translates to: SWPQQFRHWQFQEKYLENKVAPL*NGALKL
Trigger: CAATTTCAAAGCTCCATTTCATAAAGGGGCTACTTT...ATTTTCCAAGTATTTCTCTTGAAACTGCCAGTGCCTGAACTGTTGGGGCCAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR TCA 90 bp CAGATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGTGCATCCGGTTACAGTaGTTAAAAACACACACACAC +
Preference number: 4 (lower is better)
Translates to: QIPKEKSPSCYSEILTSECIRLQ*LKTHTH
Trigger: GTGTGTGTGTGTTTTTAATCACTGTAACCGGATGCA...CTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGGGATCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
CDS-3UTR GCA 90 bp AAGGAACAGAGATCATCTAGTCCTGTGCTTTTTGAAGTTCTTCGTTCAAATGAATCCGTCTGGTATGTGTaGTTGATGAAGCGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: KEQRSSSPVLFEVLRSNESVWYV*LMKRSR
Trigger: TCTGCTGCGCTTCATCAAGCACACATACCAGACGGA...TTCATTTGAACGAAGAACTTCAAAAAGCACAGGACTAGATGATCTCTGTTCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
CDS-3UTR GCA 90 bp TCCCAGATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGTGGAAAGAGAAACATaGAGTCCCTTGTGTAGGAAT +
Preference number: 4 (lower is better)
Translates to: SQIPKEKSPSCYSEILTSVERET*SPLCRN
Trigger: ATTCCTACACAAGGGACTGCATGTTTCTCTTTCCAC...ACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGGGATCTGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR GCA 90 bp CTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATTGTGGAAAGAGAAACATaGAGTCCCTTGTGTAGGAAT +
Preference number: 4 (lower is better)
Translates to: LISECHPDLSHICLSNIIVERET*SPLCRN
Trigger: ATTCCTACACAAGGGACTGCATGTTTCTCTTTCCAC...AATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529744.1
ENST00000529834.5
ENST00000534047.5
CDS-3UTR GCA 90 bp TCAGAGGCATCCTCTTCACAGAGGAAAGTCCTAGTTCGGAATCTTGACCACTATATATTCTTCCATAAGTaGTTCCTTCGTGTAGTGGAA +
Preference number: 4 (lower is better)
Translates to: SEASSSQRKVLVRNLDHYIFFHK*FLRVVE
Trigger: TTCCACTACACGAAGGAAGCACTTATGGAAGAATAT...ATAGTGGTCAAGATTCCGAACTAGGACTTTCCTCTGTGAAGAGGATGCCTCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CCA 90 bp AAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATGTTAACCTTCCAATCTTGCTGTaGCGGCATTTGCAGAGACAG +
Preference number: 4 (lower is better)
Translates to: KEKSPSCYSEILTSEHVNLPILL*RHLQRQ
Trigger: CTGTCTCTGCAAATGCCGCCACAGCAAGATTGGAAG...GTTAACATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CCA 90 bp GAAGAAACCAAGACTCAGAATAGGAGTGGCTGTTTTCATGAGTACATTTGGCTTCCCTCAGAGGGTTCTTaGAATATTCGAGGAACAAAC +
Preference number: 4 (lower is better)
Translates to: EETKTQNRSGCFHEYIWLPSEGS*NIRGTN
Trigger: GTTTGTTCCTCGAATATTCCAAGAACCCTCTGAGGG...AAGCCAAATGTACTCATGAAAACAGCCACTCCTATTCTGAGTCTTGGTTTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
CDS-3UTR CCA 90 bp ATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATCCCTCAGAGGGTTCTTaGAATATTCGAGGAACAAAC +
Preference number: 4 (lower is better)
Translates to: IPKEKSPSCYSEILTSEHPSEGS*NIRGTN
Trigger: GTTTGTTCCTCGAATATTCCAAGAACCCTCTGAGGG...ATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CCA 90 bp TCAGAGGCATCCTCTTCACAGAGGAAAGTCCTAGTTCGGAATCTTGACCACTATCAATGGAGAAAAGTATaGCAGAAAACCACATGTTAC +
Preference number: 4 (lower is better)
Translates to: SEASSSQRKVLVRNLDHYQWRKV*QKTTCY
Trigger: GTAACATGTGGTTTTCTGCCATACTTTTCTCCATTG...ATAGTGGTCAAGATTCCGAACTAGGACTTTCCTCTGTGAAGAGGATGCCTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR CCA 90 bp CTACCAATTAGCCTACCTGGGCCAATGGAGAAAAGTATGGCAGAAAACCACATGTTTCATGAGTACATTTaGCTTCCAACTAGAAAGAGG +
Preference number: 4 (lower is better)
Translates to: LPISLPGPMEKSMAENHMFHEYI*LPTRKR
Trigger: CCTCTTTCTAGTTGGAAGCCAAATGTACTCATGAAA...CATGTGGTTTTCTGCCATACTTTTCTCCATTGGCCCAGGTAGGCTAATTGGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
CDS-3UTR CCA 90 bp TATAGACAAGTGCTCAGCTCCCAGATCCCCAAGGAGAAGTCACCATCTTGTTACGGAAAAGACAGGATTTaGAATAAGGAAATCCAGTTT +
Preference number: 4 (lower is better)
Translates to: YRQVLSSQIPKEKSPSCYGKDRI*NKEIQF
Trigger: AAACTGGATTTCCTTATTCCAAATCCTGTCTTTTCC...GTAACAAGATGGTGACTTCTCCTTGGGGATCTGGGAGCTGAGCACTTGTCTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
CDS-3UTR TCA 90 bp CCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATGTTACATCTCATGAAGGCTaGACTTGGATTCCAGAAAGT +
Preference number: 4 (lower is better)
Translates to: PKEKSPSCYSEILTSEHVTSHEG*TWIPES
Trigger: ACTTTCTGGAATCCAAGTTCAGCCTTCATGAGATGT...AACATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR TCA 90 bp ATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATTCGTTTAACATCTCATaGAGGCTGAACTTGGATTCC +
Preference number: 4 (lower is better)
Translates to: IPKEKSPSCYSEILTSEHSFNIS*RLNLDS
Trigger: GGAATCCAAGTTCAGCCTTCATGAGATGTTAAACGA...ATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR TCA 90 bp GAAGAAACCAAGACTCAGAATAGGAGTGGCTGTTTTCATGAGTACATTTGGCTTTCGTTTAACATCTCATaGAGGCTGAACTTGGATTCC +
Preference number: 4 (lower is better)
Translates to: EETKTQNRSGCFHEYIWLSFNIS*RLNLDS
Trigger: GGAATCCAAGTTCAGCCTTCATGAGATGTTAAACGA...AAGCCAAATGTACTCATGAAAACAGCCACTCCTATTCTGAGTCTTGGTTTCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
CDS-3UTR TCA 90 bp ATTTCTTCAGAGGCATCCTCTTCACAGAGGAAAGTCCTAGTTCGGAATCTTGACTGGCAGCAGCTTCTTTaGCCTAAATATGTCATAAAT +
Preference number: 4 (lower is better)
Translates to: ISSEASSSQRKVLVRNLDWQQLL*PKYVIN
Trigger: ATTTATGACATATTTAGGTCAAAGAAGCTGCTGCCA...GTCAAGATTCCGAACTAGGACTTTCCTCTGTGAAGAGGATGCCTCTGAAGAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR TCA 90 bp GAACAGAGATCATCTAGTCCTGTGCTTTTTGAAGTTCTTCGTTCAAATGAAAATAAATGTTGTCAGCAGTaGGGAAGGCAGACACCAGGT +
Preference number: 4 (lower is better)
Translates to: EQRSSSPVLFEVLRSNENKCCQQ*GRQTPG
Trigger: ACCTGGTGTCTGCCTTCCTCACTGCTGACAACATTT...ATTTTCATTTGAACGAAGAACTTCAAAAAGCACAGGACTAGATGATCTCTGTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
CDS-3UTR TCA 90 bp AAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATGTTAACCATCAGACAGGAAGCTaGGCTCATTGCATAAGGTCT +
Preference number: 4 (lower is better)
Translates to: KEKSPSCYSEILTSEHVNHQTGS*AHCIRS
Trigger: AGACCTTATGCAATGAGCTCAGCTTCCTGTCTGATG...GTTAACATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR TCA 90 bp GAAGAAACCAAGACTCAGAATAGGAGTGGCTGTTTTCATGAGTACATTTGGCTTTGCATCCGGTTACAGTaGTTAAAAACACACACACAC +
Preference number: 4 (lower is better)
Translates to: EETKTQNRSGCFHEYIWLCIRLQ*LKTHTH
Trigger: GTGTGTGTGTGTTTTTAATCACTGTAACCGGATGCA...AAGCCAAATGTACTCATGAAAACAGCCACTCCTATTCTGAGTCTTGGTTTCTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
CDS-3UTR GCA 90 bp CTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATTACTTTTCTTTCTTTTTaGGGTCTCCACAGACTTCTG +
Preference number: 4 (lower is better)
Translates to: LISECHPDLSHICLSNIITFLSF*GLHRLL
Trigger: CAGAAGTCTGTGGAGACCGCAAAAAGAAAGAAAAGT...AATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529834.5
ENST00000534047.5
CDS-3UTR GCA 90 bp CCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATGTTGTGGAAAGAGAAACATaGAGTCCCTTGTGTAGGAAT +
Preference number: 4 (lower is better)
Translates to: PKEKSPSCYSEILTSEHVVERET*SPLCRN
Trigger: ATTCCTACACAAGGGACTGCATGTTTCTCTTTCCAC...AACATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR GCA 90 bp ATTTCTTCAGAGGCATCCTCTTCACAGAGGAAAGTCCTAGTTCGGAATCTTGACATATTCTTCCATAAGTaGTTCCTTCGTGTAGTGGAA +
Preference number: 4 (lower is better)
Translates to: ISSEASSSQRKVLVRNLDIFFHK*FLRVVE
Trigger: TTCCACTACACGAAGGAAGCACTTATGGAAGAATAT...GTCAAGATTCCGAACTAGGACTTTCCTCTGTGAAGAGGATGCCTCTGAAGAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR GCA 90 bp AAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATGTTAACACAAGTATAGACAAGTaGTCAGCTCCCAGATCCCCA +
Preference number: 4 (lower is better)
Translates to: KEKSPSCYSEILTSEHVNTSIDK*SAPRSP
Trigger: TGGGGATCTGGGAGCTGAGCACTTGTCTATACTTGT...GTTAACATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR CCA 90 bp AAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATGTTAACGCCTACCTGGGCCAATaGAGAAAAGTATGGCAGAAA +
Preference number: 4 (lower is better)
Translates to: KEKSPSCYSEILTSEHVNAYLGQ*RKVWQK
Trigger: TTTCTGCCATACTTTTCTCCATTGGCCCAGGTAGGC...GTTAACATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR CCA 90 bp GCACCTACTACATACCAGGCACTAGTAACACAGATAAAGAGTACACTGATAAAGAAAATGCTTTCTACTTaGCCCCTGGGACCATTGTAT +
Preference number: 4 (lower is better)
Translates to: APTTYQALVTQIKSTLIKKMLST*PLGPLY
Trigger: ATACAATGGTCCCAGGGGCCAAGTAGAAAGCATTTT...CTTTATCAGTGTACTCTTTATCTGTGTTACTAGTGCCTGGTATGTAGTAGGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396553.6
ENST00000444303.6
CDS-3UTR CCA 90 bp AAAACACAATTTGTCAAGAAGGAAGTCTTCCATCTTAACTCCTTCAAAGTAGCCGTCCTTCTGGTCACTTaGATACACACACACACACAC +
Preference number: 4 (lower is better)
Translates to: KTQFVKKEVFHLNSFKVAVLLVT*IHTHTH
Trigger: GTGTGTGTGTGTGTGTATCCAAGTGACCAGAAGGAC...GGCTACTTTGAAGGAGTTAAGATGGAAGACTTCCTTCTTGACAAATTGTGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444303.6
CDS-3UTR TCA 90 bp GGTGAAGAAACCAAGACTCAGAATAGGAGTGGCTGTTTTCATGAGTACATTTGGTACTCTTCAACTCTTTaGACTCGGACATTTCGTTTA +
Preference number: 4 (lower is better)
Translates to: GEETKTQNRSGCFHEYIWYSSTL*TRTFRL
Trigger: TAAACGAAATGTCCGAGTTCAAAGAGTTGAAGAGTA...CCAAATGTACTCATGAAAACAGCCACTCCTATTCTGAGTCTTGGTTTCTTCACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
CDS-3UTR TCA 90 bp CTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATTTACTCTTCAACTCTTTaGACTCGGACATTTCGTTTA +
Preference number: 4 (lower is better)
Translates to: LISECHPDLSHICLSNIIYSSTL*TRTFRL
Trigger: TAAACGAAATGTCCGAGTTCAAAGAGTTGAAGAGTA...AATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529834.5
ENST00000534047.5
CDS-3UTR TCA 90 bp CAGATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGTGGCAGCAGCTTCTTTaGCCTAAATATGTCATAAAT +
Preference number: 4 (lower is better)
Translates to: QIPKEKSPSCYSEILTSEWQQLL*PKYVIN
Trigger: ATTTATGACATATTTAGGTCAAAGAAGCTGCTGCCA...CTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGGGATCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR TCA 90 bp AATGAACAACTACCAATTAGCCTACCTGGGCCAATGGAGAAAAGTATGGCAGAATGGCAGCAGCTTCTTTaGCCTAAATATGTCATAAAT +
Preference number: 4 (lower is better)
Translates to: NEQLPISLPGPMEKSMAEWQQLL*PKYVIN
Trigger: ATTTATGACATATTTAGGTCAAAGAAGCTGCTGCCA...TTCTGCCATACTTTTCTCCATTGGCCCAGGTAGGCTAATTGGTAGTTGTTCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR TCA 90 bp CTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATTTGGCAGCAGCTTCTTTaGCCTAAATATGTCATAAAT +
Preference number: 4 (lower is better)
Translates to: LISECHPDLSHICLSNIIWQQLL*PKYVIN
Trigger: ATTTATGACATATTTAGGTCAAAGAAGCTGCTGCCA...AATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529834.5
CDS-3UTR TCA 90 bp GAACAGAGATCATCTAGTCCTGTGCTTTTTGAAGTTCTTCGTTCAAATGAAAATCCTAGTTCGGAATCTTaGCCACTATTAGCCACAGCA +
Preference number: 4 (lower is better)
Translates to: EQRSSSPVLFEVLRSNENPSSES*PLLATA
Trigger: TGCTGTGGCTAATAGTGGTCAAGATTCCGAACTAGG...ATTTTCATTTGAACGAAGAACTTCAAAAAGCACAGGACTAGATGATCTCTGTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
CDS-3UTR TCA 90 bp AAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATGTTAACCAGCCATCCAGAGGCTaGAATGAACAACTACCAATT +
Preference number: 4 (lower is better)
Translates to: KEKSPSCYSEILTSEHVNQPSRG*NEQLPI
Trigger: AATTGGTAGTTGTTCATTTCAGCCTCTGGATGGCTG...GTTAACATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR TCA 90 bp GTGAAGAAACCAAGACTCAGAATAGGAGTGGCTGTTTTCATGAGTACATTTGGCAAAGTAGCCCCTTTATaGAATGGAGCTTTGAAATTG +
Preference number: 4 (lower is better)
Translates to: VKKPRLRIGVAVFMSTFGKVAPL*NGALKL
Trigger: CAATTTCAAAGCTCCATTTCATAAAGGGGCTACTTT...GCCAAATGTACTCATGAAAACAGCCACTCCTATTCTGAGTCTTGGTTTCTTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
CDS-3UTR GCA 90 bp CCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATGTTACTTTTCTTTCTTTTTaGGGTCTCCACAGACTTCTG +
Preference number: 4 (lower is better)
Translates to: PKEKSPSCYSEILTSEHVTFLSF*GLHRLL
Trigger: CAGAAGTCTGTGGAGACCGCAAAAAGAAAGAAAAGT...AACATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000528723.5
ENST00000529507.5
CDS-3UTR GCA 90 bp ATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATACTTTTCTTTCTTTTTaGGGTCTCCACAGACTTCTG +
Preference number: 4 (lower is better)
Translates to: IPKEKSPSCYSEILTSEHTFLSF*GLHRLL
Trigger: CAGAAGTCTGTGGAGACCGCAAAAAGAAAGAAAAGT...ATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGGGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CCA 90 bp AAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATGTTAACCCCTCAGAGGGTTCTTaGAATATTCGAGGAACAAAC +
Preference number: 4 (lower is better)
Translates to: KEKSPSCYSEILTSEHVNPSEGS*NIRGTN
Trigger: GTTTGTTCCTCGAATATTCCAAGAACCCTCTGAGGG...GTTAACATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CCA 90 bp AATGAACAACTACCAATTAGCCTACCTGGGCCAATGGAGAAAAGTATGGCAGAACAATGGAGAAAAGTATaGCAGAAAACCACATGTTAC +
Preference number: 4 (lower is better)
Translates to: NEQLPISLPGPMEKSMAEQWRKV*QKTTCY
Trigger: GTAACATGTGGTTTTCTGCCATACTTTTCTCCATTG...TTCTGCCATACTTTTCTCCATTGGCCCAGGTAGGCTAATTGGTAGTTGTTCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR CCA 90 bp AAATTAGGAACAAGTATAGACAAGTGCTCAGCTCCCAGATCCCCAAGGAGAAGTAGCCCCTTTATGAAATaGAGCTTTGAAATTGATTGT +
Preference number: 4 (lower is better)
Translates to: KLGTSIDKCSAPRSPRRSSPFMK*SFEIDC
Trigger: ACAATCAATTTCAAAGCTCCATTTCATAAAGGGGCT...ACTTCTCCTTGGGGATCTGGGAGCTGAGCACTTGTCTATACTTGTTCCTAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR CCA 90 bp GTGAAGAAACCAAGACTCAGAATAGGAGTGGCTGTTTTCATGAGTACATTTGGCTTTCATGAGTACATTTaGCTTCCAACTAGAAAGAGG +
Preference number: 4 (lower is better)
Translates to: VKKPRLRIGVAVFMSTFGFHEYI*LPTRKR
Trigger: CCTCTTTCTAGTTGGAAGCCAAATGTACTCATGAAA...GCCAAATGTACTCATGAAAACAGCCACTCCTATTCTGAGTCTTGGTTTCTTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
CDS-3UTR TCA 90 bp AAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATGTTAACTCGTTTAACATCTCATaGAGGCTGAACTTGGATTCC +
Preference number: 4 (lower is better)
Translates to: KEKSPSCYSEILTSEHVNSFNIS*RLNLDS
Trigger: GGAATCCAAGTTCAGCCTTCATGAGATGTTAAACGA...GTTAACATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR TCA 90 bp ATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATTACTCTTCAACTCTTTaGACTCGGACATTTCGTTTA +
Preference number: 4 (lower is better)
Translates to: IPKEKSPSCYSEILTSEHYSSTL*TRTFRL
Trigger: TAAACGAAATGTCCGAGTTCAAAGAGTTGAAGAGTA...ATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR TCA 90 bp GAACAGAGATCATCTAGTCCTGTGCTTTTTGAAGTTCTTCGTTCAAATGAAAATCAGCCATCCAGAGGCTaGAATGAACAACTACCAATT +
Preference number: 4 (lower is better)
Translates to: EQRSSSPVLFEVLRSNENQPSRG*NEQLPI
Trigger: AATTGGTAGTTGTTCATTTCAGCCTCTGGATGGCTG...ATTTTCATTTGAACGAAGAACTTCAAAAAGCACAGGACTAGATGATCTCTGTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
CDS-3UTR GCA 90 bp CCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATGTTATATTCTTCCATAAGTaGTTCCTTCGTGTAGTGGAA +
Preference number: 4 (lower is better)
Translates to: PKEKSPSCYSEILTSEHVIFFHK*FLRVVE
Trigger: TTCCACTACACGAAGGAAGCACTTATGGAAGAATAT...AACATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR GCA 90 bp ATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATGATCATCTAGTCCTGTaGTTTTTGAAGTTCTTCGTT +
Preference number: 4 (lower is better)
Translates to: IPKEKSPSCYSEILTSEHDHLVL*FLKFFV
Trigger: AACGAAGAACTTCAAAAAGCACAGGACTAGATGATC...ATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGGGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
CDS-3UTR GCA 90 bp GAAGAAACCAAGACTCAGAATAGGAGTGGCTGTTTTCATGAGTACATTTGGCTTGATCATCTAGTCCTGTaGTTTTTGAAGTTCTTCGTT +
Preference number: 4 (lower is better)
Translates to: EETKTQNRSGCFHEYIWLDHLVL*FLKFFV
Trigger: AACGAAGAACTTCAAAAAGCACAGGACTAGATGATC...AAGCCAAATGTACTCATGAAAACAGCCACTCCTATTCTGAGTCTTGGTTTCTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
CDS-3UTR CCA 90 bp GGTGAAGAAACCAAGACTCAGAATAGGAGTGGCTGTTTTCATGAGTACATTTGGAGCCCCTTTATGAAATaGAGCTTTGAAATTGATTGT +
Preference number: 4 (lower is better)
Translates to: GEETKTQNRSGCFHEYIWSPFMK*SFEIDC
Trigger: ACAATCAATTTCAAAGCTCCATTTCATAAAGGGGCT...CCAAATGTACTCATGAAAACAGCCACTCCTATTCTGAGTCTTGGTTTCTTCACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
CDS-3UTR CCA 90 bp AAGGAACAGAGATCATCTAGTCCTGTGCTTTTTGAAGTTCTTCGTTCAAATGAAAAAATGCTTTCTACTTaGCCCCTGGGACCATTGTAT +
Preference number: 4 (lower is better)
Translates to: KEQRSSSPVLFEVLRSNEKMLST*PLGPLY
Trigger: ATACAATGGTCCCAGGGGCCAAGTAGAAAGCATTTT...TTCATTTGAACGAAGAACTTCAAAAAGCACAGGACTAGATGATCTCTGTTCCTT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000396553.6
ENST00000444303.6
CDS-3UTR GCA 90 bp AAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATGTTAACACTTTTCTTTCTTTTTaGGGTCTCCACAGACTTCTG +
Preference number: 4 (lower is better)
Translates to: KEKSPSCYSEILTSEHVNTFLSF*GLHRLL
Trigger: CAGAAGTCTGTGGAGACCGCAAAAAGAAAGAAAAGT...GTTAACATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CCA 90 bp ATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATAGCCCCTTTATGAAATaGAGCTTTGAAATTGATTGT +
Preference number: 4 (lower is better)
Translates to: IPKEKSPSCYSEILTSEHSPFMK*SFEIDC
Trigger: ACAATCAATTTCAAAGCTCCATTTCATAAAGGGGCT...ATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGGGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR CCA 90 bp GAAGAAACCAAGACTCAGAATAGGAGTGGCTGTTTTCATGAGTACATTTGGCTTGGAAAAGACAGGATTTaGAATAAGGAAATCCAGTTT +
Preference number: 4 (lower is better)
Translates to: EETKTQNRSGCFHEYIWLGKDRI*NKEIQF
Trigger: AAACTGGATTTCCTTATTCCAAATCCTGTCTTTTCC...AAGCCAAATGTACTCATGAAAACAGCCACTCCTATTCTGAGTCTTGGTTTCTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
CDS-3UTR TCA 90 bp AAAACACAATTTGTCAAGAAGGAAGTCTTCCATCTTAACTCCTTCAAAGTAGCCTACTCTTCAACTCTTTaGACTCGGACATTTCGTTTA +
Preference number: 4 (lower is better)
Translates to: KTQFVKKEVFHLNSFKVAYSSTL*TRTFRL
Trigger: TAAACGAAATGTCCGAGTTCAAAGAGTTGAAGAGTA...GGCTACTTTGAAGGAGTTAAGATGGAAGACTTCCTTCTTGACAAATTGTGTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR TCA 90 bp AAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATGTTAACTACTCTTCAACTCTTTaGACTCGGACATTTCGTTTA +
Preference number: 4 (lower is better)
Translates to: KEKSPSCYSEILTSEHVNYSSTL*TRTFRL
Trigger: TAAACGAAATGTCCGAGTTCAAAGAGTTGAAGAGTA...GTTAACATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR TCA 90 bp AAAACACAATTTGTCAAGAAGGAAGTCTTCCATCTTAACTCCTTCAAAGTAGCCAAAGTAGCCCCTTTATaGAATGGAGCTTTGAAATTG +
Preference number: 4 (lower is better)
Translates to: KTQFVKKEVFHLNSFKVAKVAPL*NGALKL
Trigger: CAATTTCAAAGCTCCATTTCATAAAGGGGCTACTTT...GGCTACTTTGAAGGAGTTAAGATGGAAGACTTCCTTCTTGACAAATTGTGTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR GCA 90 bp AAGGAACAGAGATCATCTAGTCCTGTGCTTTTTGAAGTTCTTCGTTCAAATGAAATATTCTTCCATAAGTaGTTCCTTCGTGTAGTGGAA +
Preference number: 4 (lower is better)
Translates to: KEQRSSSPVLFEVLRSNEIFFHK*FLRVVE
Trigger: TTCCACTACACGAAGGAAGCACTTATGGAAGAATAT...TTCATTTGAACGAAGAACTTCAAAAAGCACAGGACTAGATGATCTCTGTTCCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
CDS-3UTR GCA 90 bp AAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATGTTAACATATTCTTCCATAAGTaGTTCCTTCGTGTAGTGGAA +
Preference number: 4 (lower is better)
Translates to: KEKSPSCYSEILTSEHVNIFFHK*FLRVVE
Trigger: TTCCACTACACGAAGGAAGCACTTATGGAAGAATAT...GTTAACATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR GCA 90 bp GAACAGAGATCATCTAGTCCTGTGCTTTTTGAAGTTCTTCGTTCAAATGAAAATGATCATCTAGTCCTGTaGTTTTTGAAGTTCTTCGTT +
Preference number: 4 (lower is better)
Translates to: EQRSSSPVLFEVLRSNENDHLVL*FLKFFV
Trigger: AACGAAGAACTTCAAAAAGCACAGGACTAGATGATC...ATTTTCATTTGAACGAAGAACTTCAAAAAGCACAGGACTAGATGATCTCTGTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
CDS-3UTR CCA 90 bp GAACAGAGATCATCTAGTCCTGTGCTTTTTGAAGTTCTTCGTTCAAATGAAAATGGAAAAGACAGGATTTaGAATAAGGAAATCCAGTTT +
Preference number: 4 (lower is better)
Translates to: EQRSSSPVLFEVLRSNENGKDRI*NKEIQF
Trigger: AAACTGGATTTCCTTATTCCAAATCCTGTCTTTTCC...ATTTTCATTTGAACGAAGAACTTCAAAAAGCACAGGACTAGATGATCTCTGTTC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
CDS GCA 90 bp GAGGAGGGAGGGCCGCCTCAGCAGGGAGGAAGCCGGCCAGCCGCGTaGAGCCCCCGTCGGTGCCCTACCTGGGCGCGGAGCGGAGCAGAG +
Preference number: 5 (lower is better)
Translates to: EEGGPPQQGGSRPAA*SPRRCPTWARSGAE
Trigger: CTCTGCTCCGCTCCGCGCCCAGGTAGGGCACCGACGGGGGCTGCACGCGGCTGGCCGGCTTCCTCCCTGCTGAGGCGGCCCTCCCTCCTC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396554.7
CDS GCA 90 bp CCTCAGCAGGGAGGAAGCCGGCCAGCCGCGTGCAGCCCCCGTCGGTaGCCTACCTGGGCGCGGAGCGGAGCAGAGAGAGCCGAGAGGCTA +
Preference number: 5 (lower is better)
Translates to: PQQGGSRPAACSPRR*PTWARSGAERAERL
Trigger: TAGCCTCTCGGCTCTCTCTGCTCCGCTCCGCGCCCAGGTAGGGCACCGACGGGGGCTGCACGCGGCTGGCCGGCTTCCTCCCTGCTGAGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396554.7
CDS CCA 90 bp GGAGGAAGCCGGCCAGCCGCGTGCAGCCCCCGTCGGTGCCCTACCTaGGCGCGGAGCGGAGCAGAGAGAGCCGAGAGGCTACCTGAAGCG +
Preference number: 5 (lower is better)
Translates to: GGSRPAACSPRRCPT*ARSGAERAERLPEA
Trigger: CGCTTCAGGTAGCCTCTCGGCTCTCTCTGCTCCGCTCCGCGCCCAGGTAGGGCACCGACGGGGGCTGCACGCGGCTGGCCGGCTTCCTCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396554.7
CDS TCA 90 bp CCCTACCTGGGCGCGGAGCGGAGCAGAGAGAGCCGAGAGGCTACCTaGAGCGCCCGGGCCGCGCCGCCAACGGGAAACTTGAGAGCAGCA +
Preference number: 5 (lower is better)
Translates to: PYLGAERSRESREAT*SARAAPPTGNLRAA
Trigger: TGCTGCTCTCAAGTTTCCCGTTGGCGGCGCGGCCCGGGCGCTTCAGGTAGCCTCTCGGCTCTCTCTGCTCCGCTCCGCGCCCAGGTAGGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396554.7
CDS CCA 90 bp TCAGAGCCGCTCACTGCTCCCACGTGGGCCTCCAGCTCCGAGCGCTaGCTGGACTCTGCCACTCCTCCTGGGGAAGGTGGAGCCTGCCTC +
Preference number: 5 (lower is better)
Translates to: SEPLTAPTWASSSER*LDSATPPGEGGACL
Trigger: GAGGCAGGCTCCACCTTCCCCAGGAGGAGTGGCAGAGTCCAGCCAGCGCTCGGAGCTGGAGGCCCACGTGGGAGCAGTGAGCGGCTCTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396553.6
ENST00000524866.5
CDS TCA 90 bp CAGGCATGGCATAGGGTGCTGGCGTGGGCAGGGAAGTGGCTCCAGTaGCCACAGGGGTTGTGGGAGACATGGCCGGACTGGCTGCCGGGG +
Preference number: 5 (lower is better)
Translates to: QAWHRVLAWAGKWLQ*PQGLWETWPDWLPG
Trigger: CCCCGGCAGCCAGTCCGGCCATGTCTCCCACAACCCCTGTGGTCACTGGAGCCACTTCCCTGCCCACGCCAGCACCCTATGCCATGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000524866.5
ENST00000528723.5
ENST00000529507.5
ENST00000529834.5
ENST00000534047.5
CDS TCA 90 bp CCGGAGGTGCAGTATCCGCCCGCGGATGACCCAGGTACTGGGATGTaGTCCGCGGGAAGCGGTGGTAGGCGAGCCGCGCATACTTCTCCC +
Preference number: 5 (lower is better)
Translates to: PEVQYPPADDPGTGM*SAGSGGRRAAHTSP
Trigger: GGGAGAAGTATGCGCGGCTCGCCTACCACCGCTTCCCGCGGATCACATCCCAGTACCTGGGTCATCCGCGGGCGGATACTGCACCTCCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000524866.5
ENST00000528723.5
ENST00000529507.5
ENST00000529834.5
ENST00000531227.1
ENST00000534047.5
CDS CCA 90 bp CAGCTCCGAGCGCTGGCTGGACTCTGCCACTCCTCCTGGGGAAGGTaGAGCCTGCCTCAAGTGACCCACAGGAGCAATCCTCTGGGCGCG +
Preference number: 5 (lower is better)
Translates to: QLRALAGLCHSSWGR*SLPQVTHRSNPLGA
Trigger: CGCGCCCAGAGGATTGCTCCTGTGGGTCACTTGAGGCAGGCTCCACCTTCCCCAGGAGGAGTGGCAGAGTCCAGCCAGCGCTCGGAGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524866.5
CDS CCA 90 bp TCCGCTGATGGTGACCCGCTGGAACTCAGGCATGGCATAGGGTGCTaGCGTGGGCAGGGAAGTGGCTCCAGTGACCACAGGGGTTGTGGG +
Preference number: 5 (lower is better)
Translates to: SADGDPLELRHGIGC*RGQGSGSSDHRGCG
Trigger: CCCACAACCCCTGTGGTCACTGGAGCCACTTCCCTGCCCACGCCAGCACCCTATGCCATGCCTGAGTTCCAGCGGGTCACCATCAGCGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000524866.5
ENST00000528723.5
ENST00000529507.5
ENST00000529834.5
ENST00000534047.5
CDS CCA 90 bp CCGCCAGGAGCCGGACTTGCTCATCCACTTCAGAGATGTTCAGCTTaGGAAACTGCCGCGGCATCTCAGCCGACGTCCTCCCCTCCCCGC +
Preference number: 5 (lower is better)
Translates to: PPGAGLAHPLQRCSA*ETAAASQPTSSPPR
Trigger: GCGGGGAGGGGAGGACGTCGGCTGAGATGCCGCGGCAGTTTCCCAAGCTGAACATCTCTGAAGTGGATGAGCAAGTCCGGCTCCTGGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000444303.6
ENST00000529835.6
CDS GCA 90 bp ATCTCCGCTGATGGTGACCCGCTGGAACTCAGGCATGGCATAGGGTaGTGGCGTGGGCAGGGAAGTGGCTCCAGTGACCACAGGGGTTGT +
Preference number: 5 (lower is better)
Translates to: ISADGDPLELRHGIG*WRGQGSGSSDHRGC
Trigger: ACAACCCCTGTGGTCACTGGAGCCACTTCCCTGCCCACGCCAGCACCCTATGCCATGCCTGAGTTCCAGCGGGTCACCATCAGCGGAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000524866.5
ENST00000528723.5
ENST00000529507.5
ENST00000529834.5
ENST00000534047.5
CDS CCA 90 bp GCCACCCAGGAGGCTCAGCTGAGTCAGTGCGTGCGTGCAGCTGGCTaGGTCCTGTCTGCCGGCTGGAGTAGGAGGTCTCTGTTTTGCATA +
Preference number: 5 (lower is better)
Translates to: ATQEAQLSQCVRAAG*VLSAGWSRRSLFCI
Trigger: TATGCAAAACAGAGACCTCCTACTCCAGCCGGCAGACAGGACCCAGCCAGCTGCACGCACGCACTGACTCAGCTGAGCCTCCTGGGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528723.5
CDS TCA 90 bp GGAGCAGAAGCTCACTCACCGCGTGGACATCCAGTGAGTCCACAGTaGGGTCGTAGGGGTCCATGTGCAGGCCGTCAAACACCTGCCGCA +
Preference number: 5 (lower is better)
Translates to: GAEAHSPRGHPVSPQ*GRRGPCAGRQTPAA
Trigger: TGCGGCAGGTGTTTGACGGCCTGCACATGGACCCCTACGACCTCACTGTGGACTCACTGGATGTCCACGCGGTGAGTGAGCTTCTGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533116.1
CDS TCA 90 bp CTGGCGGCACTGGAGCAGAAGCTCACTCACCGCGTGGACATCCAGTaGGTCCACAGTGAGGTCGTAGGGGTCCATGTGCAGGCCGTCAAA +
Preference number: 5 (lower is better)
Translates to: LAALEQKLTHRVDIQ*VHSEVVGVHVQAVK
Trigger: TTTGACGGCCTGCACATGGACCCCTACGACCTCACTGTGGACTCACTGGATGTCCACGCGGTGAGTGAGCTTCTGCTCCAGTGCCGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533116.1
CDS CCA 90 bp CAGCTCCGAGCGCTGGCTGGACTCTGCCACTCCTCCTGGGGAAGGTaGAGCCTGCCTCAAGTGACCCACAGGAGCAATCCTCTAAAACCA +
Preference number: 5 (lower is better)
Translates to: QLRALAGLCHSSWGR*SLPQVTHRSNPLKP
Trigger: TGGTTTTAGAGGATTGCTCCTGTGGGTCACTTGAGGCAGGCTCCACCTTCCCCAGGAGGAGTGGCAGAGTCCAGCCAGCGCTCGGAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396553.6
CDS CCA 90 bp CCGCCAGGAGCCGGACTTGCTCATCCACTTCAGAGATGTTCAGCTTaGGAAACTGCCGCGGCATCTCAGAGCCGCTCACTGCTCCCACGT +
Preference number: 5 (lower is better)
Translates to: PPGAGLAHPLQRCSA*ETAAASQSRSLLPR
Trigger: ACGTGGGAGCAGTGAGCGGCTCTGAGATGCCGCGGCAGTTTCCCAAGCTGAACATCTCTGAAGTGGATGAGCAAGTCCGGCTCCTGGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000524866.5
ENST00000529834.5
CDS-3UTR CAA 90 bp CTCCAGCTCCCGGGCAACCTCCTTGACCATCCGAGCAAAGTACTCTCCTCCCAGGGGGCCCTTCCAATCTaGCTGTGGCGGCATTTGCAG +
Preference number: 5 (lower is better)
Translates to: LQLPGNLLDHPSKVLSSQGALPI*LWRHLQ
Trigger: CTGCAAATGCCGCCACAGCAAGATTGGAAGGGCCCC...CTGGGAGGAGAGTACTTTGCTCGGATGGTCAAGGAGGTTGCCCGGGAGCTGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534047.5
CDS-3UTR CAA 90 bp GTCCATGTGCAGGCCGTCAAACACCTGCCGCAGGGTGATCTTCCGGCCCCGCTTTCCGGGTTTGGGCTCTaGTCGGAAAACATGTGGTCG +
Preference number: 5 (lower is better)
Translates to: VHVQAVKHLPQGDLPAPLSGFGL*SENMWS
Trigger: CGACCACATGTTTTCCGACAAGAGCCCAAACCCGGA...AAGCGGGGCCGGAAGATCACCCTGCGGCAGGTGTTTGACGGCCTGCACATGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534047.5
CDS-3UTR CAA 90 bp GTCCATGTGCAGGCCGTCAAACACCTGCCGCAGGGTGATCTTCCGGCCCCGCTTGTCTGGTATGTGTGCTaGATGAAGCGCAGCAGATGC +
Preference number: 5 (lower is better)
Translates to: VHVQAVKHLPQGDLPAPLVWYVC*MKRSRC
Trigger: GCATCTGCTGCGCTTCATCAAGCACACATACCAGAC...AAGCGGGGCCGGAAGATCACCCTGCGGCAGGTGTTTGACGGCCTGCACATGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534047.5
CDS CCA 90 bp CAGCTCCCTCTCCTTGGCTTCCTTTTGCCCGATGGGGCAGTCCTCTaGGACAGTGAACAGGGACAGGGCATCTTTGCTGTCCTCTTCTCG +
Preference number: 5 (lower is better)
Translates to: QLPLLGFLLPDGAVL*DSEQGQGIFAVLFS
Trigger: CGAGAAGAGGACAGCAAAGATGCCCTGTCCCTGTTCACTGTCCCAGAGGACTGCCCCATCGGGCAAAAGGAAGCCAAGGAGAGGGAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000524866.5
ENST00000528723.5
ENST00000529507.5
ENST00000529834.5
ENST00000529835.6
ENST00000532250.5
ENST00000534047.5
CDS CCA 90 bp CCGCCAGGAGCCGGACTTGCTCATCCACTTCAGAGATGTTCAGCTTaGGAAACTGCCGCGGCATCTCAGCTGGTACTTGGGGTCAGCTGT +
Preference number: 5 (lower is better)
Translates to: PPGAGLAHPLQRCSA*ETAAASQLVLGVSC
Trigger: ACAGCTGACCCCAAGTACCAGCTGAGATGCCGCGGCAGTTTCCCAAGCTGAACATCTCTGAAGTGGATGAGCAAGTCCGGCTCCTGGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529507.5
CDS CCA 90 bp CTGAGTCAGTGCGTGCGTGCAGCTGGCTGGGTCCTGTCTGCCGGCTaGAGTAGGAGGTCTCTGTTTTGCATATCTGTGAGCAGCAGTGAG +
Preference number: 5 (lower is better)
Translates to: LSQCVRAAGWVLSAG*SRRSLFCISVSSSE
Trigger: CTCACTGCTGCTCACAGATATGCAAAACAGAGACCTCCTACTCCAGCCGGCAGACAGGACCCAGCCAGCTGCACGCACGCACTGACTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528723.5
CDS GCA 90 bp AGCCGGACTTGCTCATCCACTTCAGAGATGTTCAGCTTGGGAAACTaGCGCGGCATCTCAGTGGCTGTAGTGGCACCCACTTGGAGTCCC +
Preference number: 5 (lower is better)
Translates to: SRTCSSTSEMFSLGN*RGISVAVVAPTWSP
Trigger: GGGACTCCAAGTGGGTGCCACTACAGCCACTGAGATGCCGCGGCAGTTTCCCAAGCTGAACATCTCTGAAGTGGATGAGCAAGTCCGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532250.5
CDS TCA 90 bp TCTCCTTGGCTTCCTTTTGCCCGATGGGGCAGTCCTCTGGGACAGTaGACAGGGACAGGGCATCTTTGCTGTCCTCTTCTCGGAGCACTT +
Preference number: 5 (lower is better)
Translates to: SPWLPFARWGSPLGQ*TGTGHLCCPLLGAL
Trigger: AAGTGCTCCGAGAAGAGGACAGCAAAGATGCCCTGTCCCTGTTCACTGTCCCAGAGGACTGCCCCATCGGGCAAAAGGAAGCCAAGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000524866.5
ENST00000528723.5
ENST00000529507.5
ENST00000529834.5
ENST00000529835.6
ENST00000532250.5
ENST00000534047.5
CDS GCA 90 bp TCTCGGAGCACTTTAGCAAACACCTTCTCCGCCAGGAGCCGGACTTaGTCATCCACTTCAGAGATGTTCAGCTTGGGAAACTGCCGCGGC +
Preference number: 5 (lower is better)
Translates to: SRSTLANTFSARSRT*SSTSEMFSLGNCRG
Trigger: GCCGCGGCAGTTTCCCAAGCTGAACATCTCTGAAGTGGATGAGCAAGTCCGGCTCCTGGCGGAGAAGGTGTTTGCTAAAGTGCTCCGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000524866.5
ENST00000528723.5
ENST00000529507.5
ENST00000529834.5
ENST00000529835.6
ENST00000532250.5
ENST00000534047.5
CDS-3UTR CAA 90 bp GGGTTCTGCTCACTGGTCCAGACGTCCGGGTTTGGGCTCTTGTCGGAAAACATGTCCAGACGTCCGGGTTaGGGCTCTTGTCGGAAAACA +
Preference number: 5 (lower is better)
Translates to: GFCSLVQTSGFGLLSENMSRRPG*GSCRKT
Trigger: TGTTTTCCGACAAGAGCCCAAACCCGGACGTCTGGA...CATGTTTTCCGACAAGAGCCCAAACCCGGACGTCTGGACCAGTGAGCAGAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534047.5
CDS TCA 90 bp CCCCCAGGGACTCCAGAATGTCCAAGAAGAGCCCATCTACAGGTCTaGAGGTTTGGCTGTAGTGGCACCCACTTGGAGTCCCAGCTACTT +
Preference number: 5 (lower is better)
Translates to: PPGTPECPRRAHLQV*RFGCSGTHLESQLL
Trigger: AAGTAGCTGGGACTCCAAGTGGGTGCCACTACAGCCAAACCTTCAGACCTGTAGATGGGCTCTTCTTGGACATTCTGGAGTCCCTGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527261.5
CDS-3UTR CAA 90 bp CAGAAAGTTCAGTCGCCGGTGACAATAGGTTTTCGTGGGGCCATCGGTGATGAGTTGCTGTGGCGGCATTaGCAGAGACAGGGACTGGGA +
Preference number: 5 (lower is better)
Translates to: QKVQSPVTIGFRGAIGDELLWRH*QRQGLG
Trigger: TCCCAGTCCCTGTCTCTGCAAATGCCGCCACAGCAA...CTCATCACCGATGGCCCCACGAAAACCTATTGTCACCGGCGACTGAACTTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534047.5
CDS-3UTR CAA 90 bp CGCAGGGTGATCTTCCGGCCCCGCTTCTCTGCCACAGTCCTGTCAGGCTCCGTCGGATCTGAGCCACATTaGTCTTTCGAATATCATTTC +
Preference number: 5 (lower is better)
Translates to: RRVIFRPRFSATVLSGSVGSEPH*SFEYHF
Trigger: GAAATGATATTCGAAAGACAAATGTGGCTCAGATCC...GACGGAGCCTGACAGGACTGTGGCAGAGAAGCGGGGCCGGAAGATCACCCTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534047.5
CDS TCA 90 bp TCCTGTCTGCCGGCTGGAGTAGGAGGTCTCTGTTTTGCATATCTGTaGGCAGCAGTGAGCCAGAGCAGGAAAAGCCTGGGCTGGAAATTC +
Preference number: 5 (lower is better)
Translates to: SCLPAGVGGLCFAYL*AAVSQSRKSLGWKF
Trigger: GAATTTCCAGCCCAGGCTTTTCCTGCTCTGGCTCACTGCTGCTCACAGATATGCAAAACAGAGACCTCCTACTCCAGCCGGCAGACAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528723.5
CDS TCA 90 bp ATCTGCAGAAGGGAGGCAGGCAGGAAAGGGTTCATGCAGCAGGCCTaGGACTGCCATCCTTGGAAAGATGTGCTTGCAAGATTGGCCCTT +
Preference number: 5 (lower is better)
Translates to: ICRREAGRKGFMQQA*DCHPWKDVLARLAL
Trigger: AAGGGCCAATCTTGCAAGCACATCTTTCCAAGGATGGCAGTCTCAGGCCTGCTGCATGAACCCTTTCCTGCCTGCCTCCCTTCTGCAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531227.1
CDS TCA 90 bp CCCCCAGGGACTCCAGAATGTCCAAGAAGAGCCCATCTACAGGTCTaGAGGTTCCATTGTCCTTGGCTGCTTTTCCACTGCAATGGCAGA +
Preference number: 5 (lower is better)
Translates to: PPGTPECPRRAHLQV*RFHCPWLLFHCNGR
Trigger: TCTGCCATTGCAGTGGAAAAGCAGCCAAGGACAATGGAACCTTCAGACCTGTAGATGGGCTCTTCTTGGACATTCTGGAGTCCCTGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527369.1
CDS-3UTR CAA 90 bp TATAGACAAGTGCTCAGCTCCCAGATCCCCAAGGAGAAGTCACCATCTTGTTACCTCCTTGGCTTCCTTTaGCCCGATGGGGCAGTCCTC +
Preference number: 5 (lower is better)
Translates to: YRQVLSSQIPKEKSPSCYLLGFL*PDGAVL
Trigger: GAGGACTGCCCCATCGGGCAAAAGGAAGCCAAGGAG...GTAACAAGATGGTGACTTCTCCTTGGGGATCTGGGAGCTGAGCACTTGTCTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR CAA 90 bp TTTCAGTTTTCAAATACAGGTCACGCAGCTCACTGGCCCCCACAGGGTTGTATTCTCCTTGGCTTCCTTTaGCCCGATGGGGCAGTCCTC +
Preference number: 5 (lower is better)
Translates to: FQFSNTGHAAHWPPQGCILLGFL*PDGAVL
Trigger: GAGGACTGCCCCATCGGGCAAAAGGAAGCCAAGGAG...AATACAACCCTGTGGGGGCCAGTGAGCTGCGTGACCTGTATTTGAAAACTGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000534047.5
CDS-3UTR CAA 90 bp TATAGACAAGTGCTCAGCTCCCAGATCCCCAAGGAGAAGTCACCATCTTGTTACGGGGCCCTTCCAATCTaGCTGTGGCGGCATTTGCAG +
Preference number: 5 (lower is better)
Translates to: YRQVLSSQIPKEKSPSCYGALPI*LWRHLQ
Trigger: CTGCAAATGCCGCCACAGCAAGATTGGAAGGGCCCC...GTAACAAGATGGTGACTTCTCCTTGGGGATCTGGGAGCTGAGCACTTGTCTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000529507.5
CDS-3UTR CAA 90 bp TTTTCAAATACAGGTCACGCAGCTCACTGGCCCCCACAGGGTTGTATTTGGAGTTCCCGGGCAACCTCCTaGACCATCCGAGCAAAGTAC +
Preference number: 5 (lower is better)
Translates to: FSNTGHAAHWPPQGCIWSSRATS*TIRAKY
Trigger: GTACTTTGCTCGGATGGTCAAGGAGGTTGCCCGGGA...ACTCCAAATACAACCCTGTGGGGGCCAGTGAGCTGCGTGACCTGTATTTGAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000533116.1
ENST00000534047.5
CDS-3UTR CAA 90 bp CAGAAAGTTCAGTCGCCGGTGACAATAGGTTTTCGTGGGGCCATCGGTGATGAGACAGCAAAGACTCGCTaGTCAGGTGGATCCAACAGC +
Preference number: 5 (lower is better)
Translates to: QKVQSPVTIGFRGAIGDETAKTR*SGGSNS
Trigger: GCTGTTGGATCCACCTGACAAGCGAGTCTTTGCTGT...CTCATCACCGATGGCCCCACGAAAACCTATTGTCACCGGCGACTGAACTTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534047.5
CDS GCA 90 bp CTTCCATTTTCCCAAACTCAGGGAATCTGCAGCACCTGGCAGCCCTaGCCTCCTGACTTTGTTCCCATGTTTGAGAAGGGACAAGAGAGA +
Preference number: 5 (lower is better)
Translates to: LPFSQTQGICSTWQP*PPDFVPMFEKGQER
Trigger: TCTCTCTTGTCCCTTCTCAAACATGGGAACAAAGTCAGGAGGGCAGGGCTGCCAGGTGCTGCAGATTCCCTGAGTTTGGGAAAATGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529507.5
CDS GCA 90 bp GTTCATGCAGCAGGCCTGAGACTGCCATCCTTGGAAAGATGTGCTTaGAAGATTGGCCCTTGCCTGGTATCTGGGAACCTAGATTTCAGG +
Preference number: 5 (lower is better)
Translates to: VHAAGLRLPSLERCA*KIGPCLVSGNLDFR
Trigger: CCTGAAATCTAGGTTCCCAGATACCAGGCAAGGGCCAATCTTGCAAGCACATCTTTCCAAGGATGGCAGTCTCAGGCCTGCTGCATGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531227.1
CDS-3UTR CAA 90 bp TTTCAGTTTTCAAATACAGGTCACGCAGCTCACTGGCCCCCACAGGGTTGTATTCGCCAGGAGCCGGACTaGCTCATCCACTTCAGAGAT +
Preference number: 5 (lower is better)
Translates to: FQFSNTGHAAHWPPQGCIRQEPD*LIHFRD
Trigger: ATCTCTGAAGTGGATGAGCAAGTCCGGCTCCTGGCG...AATACAACCCTGTGGGGGCCAGTGAGCTGCGTGACCTGTATTTGAAAACTGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534047.5
CDS-3UTR CAA 90 bp TATAGACAAGTGCTCAGCTCCCAGATCCCCAAGGAGAAGTCACCATCTTGTTACAGGGACAGGGCATCTTaGCTGTCCTCTTCTCGGAGC +
Preference number: 5 (lower is better)
Translates to: YRQVLSSQIPKEKSPSCYRDRAS*LSSSRS
Trigger: GCTCCGAGAAGAGGACAGCAAAGATGCCCTGTCCCT...GTAACAAGATGGTGACTTCTCCTTGGGGATCTGGGAGCTGAGCACTTGTCTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR CAA 90 bp CTACCAATTAGCCTACCTGGGCCAATGGAGAAAAGTATGGCAGAAAACCACATGCTCCTTGGCTTCCTTTaGCCCGATGGGGCAGTCCTC +
Preference number: 5 (lower is better)
Translates to: LPISLPGPMEKSMAENHMLLGFL*PDGAVL
Trigger: GAGGACTGCCCCATCGGGCAAAAGGAAGCCAAGGAG...CATGTGGTTTTCTGCCATACTTTTCTCCATTGGCCCAGGTAGGCTAATTGGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR CAA 90 bp TCAGAGGCATCCTCTTCACAGAGGAAAGTCCTAGTTCGGAATCTTGACCACTATCTCCTTGGCTTCCTTTaGCCCGATGGGGCAGTCCTC +
Preference number: 5 (lower is better)
Translates to: SEASSSQRKVLVRNLDHYLLGFL*PDGAVL
Trigger: GAGGACTGCCCCATCGGGCAAAAGGAAGCCAAGGAG...ATAGTGGTCAAGATTCCGAACTAGGACTTTCCTCTGTGAAGAGGATGCCTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CAA 90 bp TATAGACAAGTGCTCAGCTCCCAGATCCCCAAGGAGAAGTCACCATCTTGTTACTGCAGCTCCCTCTCCTaGGCTTCCTTTTGCCCGATG +
Preference number: 5 (lower is better)
Translates to: YRQVLSSQIPKEKSPSCYCSSLS*ASFCPM
Trigger: CATCGGGCAAAAGGAAGCCAAGGAGAGGGAGCTGCA...GTAACAAGATGGTGACTTCTCCTTGGGGATCTGGGAGCTGAGCACTTGTCTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR CAA 90 bp TATAGACAAGTGCTCAGCTCCCAGATCCCCAAGGAGAAGTCACCATCTTGTTACTCCCGGGCAACCTCCTaGACCATCCGAGCAAAGTAC +
Preference number: 5 (lower is better)
Translates to: YRQVLSSQIPKEKSPSCYSRATS*TIRAKY
Trigger: GTACTTTGCTCGGATGGTCAAGGAGGTTGCCCGGGA...GTAACAAGATGGTGACTTCTCCTTGGGGATCTGGGAGCTGAGCACTTGTCTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR CAA 90 bp TTTGACCTAAATATGTCACTGGGGGACAGCAAAGACTCGCTTGTCAGGTGGATCTCCCGGGCAACCTCCTaGACCATCCGAGCAAAGTAC +
Preference number: 5 (lower is better)
Translates to: FDLNMSLGDSKDSLVRWISRATS*TIRAKY
Trigger: GTACTTTGCTCGGATGGTCAAGGAGGTTGCCCGGGA...GATCCACCTGACAAGCGAGTCTTTGCTGTCCCCCAGTGACATATTTAGGTCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534047.5
CDS-3UTR CAA 90 bp TTTCAGTTTTCAAATACAGGTCACGCAGCTCACTGGCCCCCACAGGGTTGTATTTCTGAGTACTGGTACTaGCTCTCCTCCAGCTCCCGG +
Preference number: 5 (lower is better)
Translates to: FQFSNTGHAAHWPPQGCISEYWY*LSSSSR
Trigger: CCGGGAGCTGGAGGAGAGCAAGTACCAGTACTCAGA...AATACAACCCTGTGGGGGCCAGTGAGCTGCGTGACCTGTATTTGAAAACTGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000533116.1
ENST00000534047.5
CDS-3UTR CAA 90 bp GACAGGAAGCTGAGCTCATTGCATAAGGTCTCATATCGGAATGCCATCCGGATCTCCCTGCGGAGGTTGTaGAGCACCATGATGTTGGCA +
Preference number: 5 (lower is better)
Translates to: DRKLSSLHKVSYRNAIRISLRRL*STMMLA
Trigger: TGCCAACATCATGGTGCTCAACAACCTCCGCAGGGA...GATCCGGATGGCATTCCGATATGAGACCTTATGCAATGAGCTCAGCTTCCTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529744.1
ENST00000534047.5
CDS-3UTR CAA 90 bp TTTTCAAATACAGGTCACGCAGCTCACTGGCCCCCACAGGGTTGTATTTGGAGTTCCCTGCGGAGGTTGTaGAGCACCATGATGTTGGCA +
Preference number: 5 (lower is better)
Translates to: FSNTGHAAHWPPQGCIWSSLRRL*STMMLA
Trigger: TGCCAACATCATGGTGCTCAACAACCTCCGCAGGGA...ACTCCAAATACAACCCTGTGGGGGCCAGTGAGCTGCGTGACCTGTATTTGAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534047.5
CDS-3UTR CAA 90 bp TATAGACAAGTGCTCAGCTCCCAGATCCCCAAGGAGAAGTCACCATCTTGTTACCGCTCCCTGCGGAGGTaGTTGAGCACCATGATGTTG +
Preference number: 5 (lower is better)
Translates to: YRQVLSSQIPKEKSPSCYRSLRR*LSTMML
Trigger: CAACATCATGGTGCTCAACAACCTCCGCAGGGAGCG...GTAACAAGATGGTGACTTCTCCTTGGGGATCTGGGAGCTGAGCACTTGTCTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR CAA 90 bp TCAGTTTTCAAATACAGGTCACGCAGCTCACTGGCCCCCACAGGGTTGTATTTGAATACCGGACTCTTCTaGAGGAGCAGCCCGTGGGAA +
Preference number: 5 (lower is better)
Translates to: SVFKYRSRSSLAPTGLYLNTGLF*RSSPWE
Trigger: TTCCCACGGGCTGCTCCTCAAGAAGAGTCCGGTATT...CAAATACAACCCTGTGGGGGCCAGTGAGCTGCGTGACCTGTATTTGAAAACTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534047.5
CDS GCA 90 bp AAGGGTTCATGCAGCAGGCCTGAGACTGCCATCCTTGGAAAGATGTaGTTGCAAGATTGGCCCTTGCCTGGTATCTGGGAACCTAGATTT +
Preference number: 5 (lower is better)
Translates to: KGSCSRPETAILGKM*LQDWPLPGIWEPRF
Trigger: AAATCTAGGTTCCCAGATACCAGGCAAGGGCCAATCTTGCAAGCACATCTTTCCAAGGATGGCAGTCTCAGGCCTGCTGCATGAACCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531227.1
CDS-3UTR CAA 90 bp CATTGCATAAGGTCTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTAGGGACAGGGCATCTTaGCTGTCCTCTTCTCGGAGC +
Preference number: 5 (lower is better)
Translates to: HCIRSHIGMPSGSEPHLSRDRAS*LSSSRS
Trigger: GCTCCGAGAAGAGGACAGCAAAGATGCCCTGTCCCT...AGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAGACCTTATGCAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534047.5
CDS-3UTR CAA 90 bp AAATTAGGAACAAGTATAGACAAGTGCTCAGCTCCCAGATCCCCAAGGAGAAGTGGGGCCCTTCCAATCTaGCTGTGGCGGCATTTGCAG +
Preference number: 5 (lower is better)
Translates to: KLGTSIDKCSAPRSPRRSGALPI*LWRHLQ
Trigger: CTGCAAATGCCGCCACAGCAAGATTGGAAGGGCCCC...ACTTCTCCTTGGGGATCTGGGAGCTGAGCACTTGTCTATACTTGTTCCTAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000529507.5
CDS-3UTR CAA 90 bp CTCCAGCTCCCGGGCAACCTCCTTGACCATCCGAGCAAAGTACTCTCCTCCCAGTTACTCTTCAACTCTTaGAACTCGGACATTTCGTTT +
Preference number: 5 (lower is better)
Translates to: LQLPGNLLDHPSKVLSSQLLFNS*NSDISF
Trigger: AAACGAAATGTCCGAGTTCAAAGAGTTGAAGAGTAA...CTGGGAGGAGAGTACTTTGCTCGGATGGTCAAGGAGGTTGCCCGGGAGCTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534047.5
CDS-3UTR CAA 90 bp TTTTCAAATACAGGTCACGCAGCTCACTGGCCCCCACAGGGTTGTATTTGGAGTCTGGCCCCCACAGGGTaGTATTTGGAGTTGAACTTG +
Preference number: 5 (lower is better)
Translates to: FSNTGHAAHWPPQGCIWSLAPTG*YLELNL
Trigger: CAAGTTCAACTCCAAATACAACCCTGTGGGGGCCAG...ACTCCAAATACAACCCTGTGGGGGCCAGTGAGCTGCGTGACCTGTATTTGAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000533116.1
ENST00000534047.5
CDS-3UTR CAA 90 bp TCAGAGGCATCCTCTTCACAGAGGAAAGTCCTAGTTCGGAATCTTGACCACTATTCCCGGGCAACCTCCTaGACCATCCGAGCAAAGTAC +
Preference number: 5 (lower is better)
Translates to: SEASSSQRKVLVRNLDHYSRATS*TIRAKY
Trigger: GTACTTTGCTCGGATGGTCAAGGAGGTTGCCCGGGA...ATAGTGGTCAAGATTCCGAACTAGGACTTTCCTCTGTGAAGAGGATGCCTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CAA 90 bp TCAGAGGCATCCTCTTCACAGAGGAAAGTCCTAGTTCGGAATCTTGACCACTATTCTGAGTACTGGTACTaGCTCTCCTCCAGCTCCCGG +
Preference number: 5 (lower is better)
Translates to: SEASSSQRKVLVRNLDHYSEYWY*LSSSSR
Trigger: CCGGGAGCTGGAGGAGAGCAAGTACCAGTACTCAGA...ATAGTGGTCAAGATTCCGAACTAGGACTTTCCTCTGTGAAGAGGATGCCTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CAA 90 bp TCAGAGGCATCCTCTTCACAGAGGAAAGTCCTAGTTCGGAATCTTGACCACTATCGCTCCCTGCGGAGGTaGTTGAGCACCATGATGTTG +
Preference number: 5 (lower is better)
Translates to: SEASSSQRKVLVRNLDHYRSLRR*LSTMML
Trigger: CAACATCATGGTGCTCAACAACCTCCGCAGGGAGCG...ATAGTGGTCAAGATTCCGAACTAGGACTTTCCTCTGTGAAGAGGATGCCTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CAA 90 bp TCCTGGCCCCAACAGTTCAGGCACTGGCAGTTTCAAGAGAAATACTTGGAAAATCGCTCCCTGCGGAGGTaGTTGAGCACCATGATGTTG +
Preference number: 5 (lower is better)
Translates to: SWPQQFRHWQFQEKYLENRSLRR*LSTMML
Trigger: CAACATCATGGTGCTCAACAACCTCCGCAGGGAGCG...ATTTTCCAAGTATTTCTCTTGAAACTGCCAGTGCCTGAACTGTTGGGGCCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR CAA 90 bp GACAGGAAGCTGAGCTCATTGCATAAGGTCTCATATCGGAATGCCATCCGGATCAACTGTTGTTGCTTCTaGAGGAGCAGCCCGTGGGAA +
Preference number: 5 (lower is better)
Translates to: DRKLSSLHKVSYRNAIRINCCCF*RSSPWE
Trigger: TTCCCACGGGCTGCTCCTCAAGAAGCAACAACAGTT...GATCCGGATGGCATTCCGATATGAGACCTTATGCAATGAGCTCAGCTTCCTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529744.1
CDS CCA 90 bp TGGAAGGGACAAGTAGCTGGTCTCCATCTTGGGTCTTCAGGATATTaGATGAGACAAACAGGGCACCCTGAAATCAAAATCAGGGGTCCC +
Preference number: 5 (lower is better)
Translates to: WKGQVAGLHLGSSGY*MRQTGHPEIKIRGP
Trigger: GGGACCCCTGATTTTGATTTCAGGGTGCCCTGTTTGTCTCATCCAATATCCTGAAGACCCAAGATGGAGACCAGCTACTTGTCCCTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527261.5
CDS-3UTR CAA 90 bp ATTTCTTCAGAGGCATCCTCTTCACAGAGGAAAGTCCTAGTTCGGAATCTTGACCGCCAGGAGCCGGACTaGCTCATCCACTTCAGAGAT +
Preference number: 5 (lower is better)
Translates to: ISSEASSSQRKVLVRNLDRQEPD*LIHFRD
Trigger: ATCTCTGAAGTGGATGAGCAAGTCCGGCTCCTGGCG...GTCAAGATTCCGAACTAGGACTTTCCTCTGTGAAGAGGATGCCTCTGAAGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CAA 90 bp ATTTCTTCAGAGGCATCCTCTTCACAGAGGAAAGTCCTAGTTCGGAATCTTGACAGGGACAGGGCATCTTaGCTGTCCTCTTCTCGGAGC +
Preference number: 5 (lower is better)
Translates to: ISSEASSSQRKVLVRNLDRDRAS*LSSSRS
Trigger: GCTCCGAGAAGAGGACAGCAAAGATGCCCTGTCCCT...GTCAAGATTCCGAACTAGGACTTTCCTCTGTGAAGAGGATGCCTCTGAAGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CAA 90 bp GGTGAAGAAACCAAGACTCAGAATAGGAGTGGCTGTTTTCATGAGTACATTTGGCTCCTTGGCTTCCTTTaGCCCGATGGGGCAGTCCTC +
Preference number: 5 (lower is better)
Translates to: GEETKTQNRSGCFHEYIWLLGFL*PDGAVL
Trigger: GAGGACTGCCCCATCGGGCAAAAGGAAGCCAAGGAG...CCAAATGTACTCATGAAAACAGCCACTCCTATTCTGAGTCTTGGTTTCTTCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
CDS-3UTR CAA 90 bp CTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATTCTCCTTGGCTTCCTTTaGCCCGATGGGGCAGTCCTC +
Preference number: 5 (lower is better)
Translates to: LISECHPDLSHICLSNIILLGFL*PDGAVL
Trigger: GAGGACTGCCCCATCGGGCAAAAGGAAGCCAAGGAG...AATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529834.5
ENST00000534047.5
CDS-3UTR CAA 90 bp ATATTTAAGGAAGAGGTGAAGCTCTCGATGATCTTGGGGGTTGATAGTGGCCTTTGCAGCTCCCTCTCCTaGGCTTCCTTTTGCCCGATG +
Preference number: 5 (lower is better)
Translates to: IFKEEVKLSMILGVDSGLCSSLS*ASFCPM
Trigger: CATCGGGCAAAAGGAAGCCAAGGAGAGGGAGCTGCA...AAGGCCACTATCAACCCCCAAGATCATCGAGAGCTTCACCTCTTCCTTAAATAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534047.5
CDS-3UTR CAA 90 bp CTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATTGGGGCCCTTCCAATCTaGCTGTGGCGGCATTTGCAG +
Preference number: 5 (lower is better)
Translates to: LISECHPDLSHICLSNIIGALPI*LWRHLQ
Trigger: CTGCAAATGCCGCCACAGCAAGATTGGAAGGGCCCC...AATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529834.5
ENST00000534047.5
CDS-3UTR CAA 90 bp TTTGACCTAAATATGTCACTGGGGGACAGCAAAGACTCGCTTGTCAGGTGGATCCTGGCCCCCACAGGGTaGTATTTGGAGTTGAACTTG +
Preference number: 5 (lower is better)
Translates to: FDLNMSLGDSKDSLVRWILAPTG*YLELNL
Trigger: CAAGTTCAACTCCAAATACAACCCTGTGGGGGCCAG...GATCCACCTGACAAGCGAGTCTTTGCTGTCCCCCAGTGACATATTTAGGTCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000534047.5
CDS-3UTR CAA 90 bp ATTTCTTCAGAGGCATCCTCTTCACAGAGGAAAGTCCTAGTTCGGAATCTTGACTCCCGGGCAACCTCCTaGACCATCCGAGCAAAGTAC +
Preference number: 5 (lower is better)
Translates to: ISSEASSSQRKVLVRNLDSRATS*TIRAKY
Trigger: GTACTTTGCTCGGATGGTCAAGGAGGTTGCCCGGGA...GTCAAGATTCCGAACTAGGACTTTCCTCTGTGAAGAGGATGCCTCTGAAGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CAA 90 bp GTACTCTCCTCCCAGATAGTTTTCAGTTTTCAAATACAGGTCACGCAGCTCACTTCTGAGTACTGGTACTaGCTCTCCTCCAGCTCCCGG +
Preference number: 5 (lower is better)
Translates to: VLSSQIVFSFQIQVTQLTSEYWY*LSSSSR
Trigger: CCGGGAGCTGGAGGAGAGCAAGTACCAGTACTCAGA...AGTGAGCTGCGTGACCTGTATTTGAAAACTGAAAACTATCTGGGAGGAGAGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000533116.1
ENST00000534047.5
CDS-3UTR CAA 90 bp TCCTGGCCCCAACAGTTCAGGCACTGGCAGTTTCAAGAGAAATACTTGGAAAATTCCAGACGTCCGGGTTaGGGCTCTTGTCGGAAAACA +
Preference number: 5 (lower is better)
Translates to: SWPQQFRHWQFQEKYLENSRRPG*GSCRKT
Trigger: TGTTTTCCGACAAGAGCCCAAACCCGGACGTCTGGA...ATTTTCCAAGTATTTCTCTTGAAACTGCCAGTGCCTGAACTGTTGGGGCCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR CAA 90 bp TCAGAGGCATCCTCTTCACAGAGGAAAGTCCTAGTTCGGAATCTTGACCACTATTCCAGACGTCCGGGTTaGGGCTCTTGTCGGAAAACA +
Preference number: 5 (lower is better)
Translates to: SEASSSQRKVLVRNLDHYSRRPG*GSCRKT
Trigger: TGTTTTCCGACAAGAGCCCAAACCCGGACGTCTGGA...ATAGTGGTCAAGATTCCGAACTAGGACTTTCCTCTGTGAAGAGGATGCCTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CAA 90 bp ATCCTGGCCCCAACAGTTCAGGCACTGGCAGTTTCAAGAGAAATACTTGGAAAATCCAGACGTCCGGGTTaGGGCTCTTGTCGGAAAACA +
Preference number: 5 (lower is better)
Translates to: ILAPTVQALAVSREILGKSRRPG*GSCRKT
Trigger: TGTTTTCCGACAAGAGCCCAAACCCGGACGTCTGGA...TTTTCCAAGTATTTCTCTTGAAACTGCCAGTGCCTGAACTGTTGGGGCCAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR CAA 90 bp TCAGAGGCATCCTCTTCACAGAGGAAAGTCCTAGTTCGGAATCTTGACCACTATTCCCTGCGGAGGTTGTaGAGCACCATGATGTTGGCA +
Preference number: 5 (lower is better)
Translates to: SEASSSQRKVLVRNLDHYSLRRL*STMMLA
Trigger: TGCCAACATCATGGTGCTCAACAACCTCCGCAGGGA...ATAGTGGTCAAGATTCCGAACTAGGACTTTCCTCTGTGAAGAGGATGCCTCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CAA 90 bp TCAGAGGCATCCTCTTCACAGAGGAAAGTCCTAGTTCGGAATCTTGACCACTATAATACCGGACTCTTCTaGAGGAGCAGCCCGTGGGAA +
Preference number: 5 (lower is better)
Translates to: SEASSSQRKVLVRNLDHYNTGLF*RSSPWE
Trigger: TTCCCACGGGCTGCTCCTCAAGAAGAGTCCGGTATT...ATAGTGGTCAAGATTCCGAACTAGGACTTTCCTCTGTGAAGAGGATGCCTCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CAA 90 bp ATCCTGGCCCCAACAGTTCAGGCACTGGCAGTTTCAAGAGAAATACTTGGAAAAAATACCGGACTCTTCTaGAGGAGCAGCCCGTGGGAA +
Preference number: 5 (lower is better)
Translates to: ILAPTVQALAVSREILGKNTGLF*RSSPWE
Trigger: TTCCCACGGGCTGCTCCTCAAGAAGAGTCCGGTATT...TTTTCCAAGTATTTCTCTTGAAACTGCCAGTGCCTGAACTGTTGGGGCCAGGAT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR CAA 90 bp GACAGGAAGCTGAGCTCATTGCATAAGGTCTCATATCGGAATGCCATCCGGATCGCTCAGCTTCCACACTaGAGCTGCAATGGCATATTC +
Preference number: 5 (lower is better)
Translates to: DRKLSSLHKVSYRNAIRIAQLPH*SCNGIF
Trigger: GAATATGCCATTGCAGCTCAAGTGTGGAAGCTGAGC...GATCCGGATGGCATTCCGATATGAGACCTTATGCAATGAGCTCAGCTTCCTGTC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529744.1
ENST00000534047.5
CDS-3UTR CAA 90 bp TATAGACAAGTGCTCAGCTCCCAGATCCCCAAGGAGAAGTCACCATCTTGTTACCCTGCCCTCCTGACTTaGTTCCCATGTTTGAGAAGG +
Preference number: 5 (lower is better)
Translates to: YRQVLSSQIPKEKSPSCYPALLT*FPCLRR
Trigger: CCTTCTCAAACATGGGAACAAAGTCAGGAGGGCAGG...GTAACAAGATGGTGACTTCTCCTTGGGGATCTGGGAGCTGAGCACTTGTCTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529507.5
CDS-3UTR CAA 90 bp ATTTCTTCAGAGGCATCCTCTTCACAGAGGAAAGTCCTAGTTCGGAATCTTGACTCAGAGATGTTCAGCTaGGGAAACTGCCGCGGCATC +
Preference number: 5 (lower is better)
Translates to: ISSEASSSQRKVLVRNLDSEMFS*GNCRGI
Trigger: GATGCCGCGGCAGTTTCCCAAGCTGAACATCTCTGA...GTCAAGATTCCGAACTAGGACTTTCCTCTGTGAAGAGGATGCCTCTGAAGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CAA 90 bp CAGATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCGCCAGGAGCCGGACTaGCTCATCCACTTCAGAGAT +
Preference number: 5 (lower is better)
Translates to: QIPKEKSPSCYSEILTSERQEPD*LIHFRD
Trigger: ATCTCTGAAGTGGATGAGCAAGTCCGGCTCCTGGCG...CTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGGGATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CAA 90 bp CTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATTCGCCAGGAGCCGGACTaGCTCATCCACTTCAGAGAT +
Preference number: 5 (lower is better)
Translates to: LISECHPDLSHICLSNIIRQEPD*LIHFRD
Trigger: ATCTCTGAAGTGGATGAGCAAGTCCGGCTCCTGGCG...AATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529834.5
ENST00000534047.5
CDS-3UTR CAA 90 bp CTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATTAGGGACAGGGCATCTTaGCTGTCCTCTTCTCGGAGC +
Preference number: 5 (lower is better)
Translates to: LISECHPDLSHICLSNIIRDRAS*LSSSRS
Trigger: GCTCCGAGAAGAGGACAGCAAAGATGCCCTGTCCCT...AATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529834.5
ENST00000534047.5
CDS-3UTR CAA 90 bp AATGAACAACTACCAATTAGCCTACCTGGGCCAATGGAGAAAAGTATGGCAGAATGCAGCTCCCTCTCCTaGGCTTCCTTTTGCCCGATG +
Preference number: 5 (lower is better)
Translates to: NEQLPISLPGPMEKSMAECSSLS*ASFCPM
Trigger: CATCGGGCAAAAGGAAGCCAAGGAGAGGGAGCTGCA...TTCTGCCATACTTTTCTCCATTGGCCCAGGTAGGCTAATTGGTAGTTGTTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR CAA 90 bp GTGAAGAAACCAAGACTCAGAATAGGAGTGGCTGTTTTCATGAGTACATTTGGCTGCAGCTCCCTCTCCTaGGCTTCCTTTTGCCCGATG +
Preference number: 5 (lower is better)
Translates to: VKKPRLRIGVAVFMSTFGCSSLS*ASFCPM
Trigger: CATCGGGCAAAAGGAAGCCAAGGAGAGGGAGCTGCA...GCCAAATGTACTCATGAAAACAGCCACTCCTATTCTGAGTCTTGGTTTCTTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
CDS-3UTR CAA 90 bp CTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATTTGCAGCTCCCTCTCCTaGGCTTCCTTTTGCCCGATG +
Preference number: 5 (lower is better)
Translates to: LISECHPDLSHICLSNIICSSLS*ASFCPM
Trigger: CATCGGGCAAAAGGAAGCCAAGGAGAGGGAGCTGCA...AATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529834.5
ENST00000534047.5
CDS-3UTR CAA 90 bp AATGAACAACTACCAATTAGCCTACCTGGGCCAATGGAGAAAAGTATGGCAGAATTGCTGTGGCGGCATTaGCAGAGACAGGGACTGGGA +
Preference number: 5 (lower is better)
Translates to: NEQLPISLPGPMEKSMAELLWRH*QRQGLG
Trigger: TCCCAGTCCCTGTCTCTGCAAATGCCGCCACAGCAA...TTCTGCCATACTTTTCTCCATTGGCCCAGGTAGGCTAATTGGTAGTTGTTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000529507.5
CDS-3UTR CAA 90 bp TCCCAGATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTTTGCTGTGGCGGCATTaGCAGAGACAGGGACTGGGA +
Preference number: 5 (lower is better)
Translates to: SQIPKEKSPSCYSEILTSLLWRH*QRQGLG
Trigger: TCCCAGTCCCTGTCTCTGCAAATGCCGCCACAGCAA...ACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGGGATCTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CAA 90 bp CTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATTTTGCTGTGGCGGCATTaGCAGAGACAGGGACTGGGA +
Preference number: 5 (lower is better)
Translates to: LISECHPDLSHICLSNIILLWRH*QRQGLG
Trigger: TCCCAGTCCCTGTCTCTGCAAATGCCGCCACAGCAA...AATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529834.5
ENST00000534047.5
CDS-3UTR CAA 90 bp ATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATGGGGCCCTTCCAATCTaGCTGTGGCGGCATTTGCAG +
Preference number: 5 (lower is better)
Translates to: IPKEKSPSCYSEILTSEHGALPI*LWRHLQ
Trigger: CTGCAAATGCCGCCACAGCAAGATTGGAAGGGCCCC...ATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CAA 90 bp TCCCAGATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTTCCCGGGCAACCTCCTaGACCATCCGAGCAAAGTAC +
Preference number: 5 (lower is better)
Translates to: SQIPKEKSPSCYSEILTSSRATS*TIRAKY
Trigger: GTACTTTGCTCGGATGGTCAAGGAGGTTGCCCGGGA...ACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGGGATCTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CAA 90 bp CTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATTTCCCGGGCAACCTCCTaGACCATCCGAGCAAAGTAC +
Preference number: 5 (lower is better)
Translates to: LISECHPDLSHICLSNIISRATS*TIRAKY
Trigger: GTACTTTGCTCGGATGGTCAAGGAGGTTGCCCGGGA...AATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529834.5
ENST00000534047.5
CDS-3UTR CAA 90 bp AATGAACAACTACCAATTAGCCTACCTGGGCCAATGGAGAAAAGTATGGCAGAATCTGAGTACTGGTACTaGCTCTCCTCCAGCTCCCGG +
Preference number: 5 (lower is better)
Translates to: NEQLPISLPGPMEKSMAESEYWY*LSSSSR
Trigger: CCGGGAGCTGGAGGAGAGCAAGTACCAGTACTCAGA...TTCTGCCATACTTTTCTCCATTGGCCCAGGTAGGCTAATTGGTAGTTGTTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR CAA 90 bp CTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATTTCTGAGTACTGGTACTaGCTCTCCTCCAGCTCCCGG +
Preference number: 5 (lower is better)
Translates to: LISECHPDLSHICLSNIISEYWY*LSSSSR
Trigger: CCGGGAGCTGGAGGAGAGCAAGTACCAGTACTCAGA...AATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529834.5
ENST00000534047.5
CDS-3UTR CAA 90 bp AAATTAGGAACAAGTATAGACAAGTGCTCAGCTCCCAGATCCCCAAGGAGAAGTTCCGGGTTTGGGCTCTaGTCGGAAAACATGTGGTCG +
Preference number: 5 (lower is better)
Translates to: KLGTSIDKCSAPRSPRRSSGFGL*SENMWS
Trigger: CGACCACATGTTTTCCGACAAGAGCCCAAACCCGGA...ACTTCTCCTTGGGGATCTGGGAGCTGAGCACTTGTCTATACTTGTTCCTAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR CAA 90 bp GCTTTCTACTTGGCCCCTGGGACCATTGTATCTTCTGAAGTCATCATAGTAGATTCCCTGCGGAGGTTGTaGAGCACCATGATGTTGGCA +
Preference number: 5 (lower is better)
Translates to: AFYLAPGTIVSSEVIIVDSLRRL*STMMLA
Trigger: TGCCAACATCATGGTGCTCAACAACCTCCGCAGGGA...ATCTACTATGATGACTTCAGAAGATACAATGGTCCCAGGGGCCAAGTAGAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396553.6
ENST00000444303.6
CDS-3UTR CAA 90 bp TCCCAGATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTCGCTCCCTGCGGAGGTaGTTGAGCACCATGATGTTG +
Preference number: 5 (lower is better)
Translates to: SQIPKEKSPSCYSEILTSRSLRR*LSTMML
Trigger: CAACATCATGGTGCTCAACAACCTCCGCAGGGAGCG...ACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGGGATCTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CAA 90 bp CTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATTCGCTCCCTGCGGAGGTaGTTGAGCACCATGATGTTG +
Preference number: 5 (lower is better)
Translates to: LISECHPDLSHICLSNIIRSLRR*LSTMML
Trigger: CAACATCATGGTGCTCAACAACCTCCGCAGGGAGCG...AATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529744.1
ENST00000529834.5
ENST00000534047.5
CDS-3UTR CAA 90 bp CATCCGAGCAAAGTACTCTCCTCCCAGATAGTTTTCAGTTTTCAAATACAGGTCCGCTCCCTGCGGAGGTaGTTGAGCACCATGATGTTG +
Preference number: 5 (lower is better)
Translates to: HPSKVLSSQIVFSFQIQVRSLRR*LSTMML
Trigger: CAACATCATGGTGCTCAACAACCTCCGCAGGGAGCG...GACCTGTATTTGAAAACTGAAAACTATCTGGGAGGAGAGTACTTTGCTCGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534047.5
CDS-3UTR CAA 90 bp AAATTAGGAACAAGTATAGACAAGTGCTCAGCTCCCAGATCCCCAAGGAGAAGTAATACCGGACTCTTCTaGAGGAGCAGCCCGTGGGAA +
Preference number: 5 (lower is better)
Translates to: KLGTSIDKCSAPRSPRRSNTGLF*RSSPWE
Trigger: TTCCCACGGGCTGCTCCTCAAGAAGAGTCCGGTATT...ACTTCTCCTTGGGGATCTGGGAGCTGAGCACTTGTCTATACTTGTTCCTAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR CAA 90 bp CTACCAATTAGCCTACCTGGGCCAATGGAGAAAAGTATGGCAGAAAACCACATGATGAACGCAGTCACTTaGACAGCCCCTGAGCATCAC +
Preference number: 5 (lower is better)
Translates to: LPISLPGPMEKSMAENHMMNAVT*TAPEHH
Trigger: GTGATGCTCAGGGGCTGTCAAAGTGACTGCGTTCAT...CATGTGGTTTTCTGCCATACTTTTCTCCATTGGCCCAGGTAGGCTAATTGGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
CDS-3UTR CAA 90 bp TCAGAGGCATCCTCTTCACAGAGGAAAGTCCTAGTTCGGAATCTTGACCACTATCTTCCATATGCTGAATaGACCAGTGGAGGGGACAGG +
Preference number: 5 (lower is better)
Translates to: SEASSSQRKVLVRNLDHYLPYAE*TSGGDR
Trigger: CCTGTCCCCTCCACTGGTCAATTCAGCATATGGAAG...ATAGTGGTCAAGATTCCGAACTAGGACTTTCCTCTGTGAAGAGGATGCCTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444303.6
CDS CCA 90 bp CTGAGATCACCTACAAGCACTGACATTAAGGCCAGGGAAGCTTTTTaGAAGGGACAAGTAGCTGGTCTCCATCTTGGGTCTTCAGGATAT +
Preference number: 5 (lower is better)
Translates to: LRSPTSTDIKAREAF*KGQVAGLHLGSSGY
Trigger: ATATCCTGAAGACCCAAGATGGAGACCAGCTACTTGTCCCTTCCAAAAAGCTTCCCTGGCCTTAATGTCAGTGCTTGTAGGTGATCTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527261.5
CDS-3UTR CAA 90 bp CTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATTTCAGAGATGTTCAGCTaGGGAAACTGCCGCGGCATC +
Preference number: 5 (lower is better)
Translates to: LISECHPDLSHICLSNIISEMFS*GNCRGI
Trigger: GATGCCGCGGCAGTTTCCCAAGCTGAACATCTCTGA...AATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529834.5
ENST00000534047.5
CDS-3UTR CAA 90 bp ATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATCGCCAGGAGCCGGACTaGCTCATCCACTTCAGAGAT +
Preference number: 5 (lower is better)
Translates to: IPKEKSPSCYSEILTSEHRQEPD*LIHFRD
Trigger: ATCTCTGAAGTGGATGAGCAAGTCCGGCTCCTGGCG...ATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CAA 90 bp GCACCTACTACATACCAGGCACTAGTAACACAGATAAAGAGTACACTGATAAAGAGGGACAGGGCATCTTaGCTGTCCTCTTCTCGGAGC +
Preference number: 5 (lower is better)
Translates to: APTTYQALVTQIKSTLIKRDRAS*LSSSRS
Trigger: GCTCCGAGAAGAGGACAGCAAAGATGCCCTGTCCCT...CTTTATCAGTGTACTCTTTATCTGTGTTACTAGTGCCTGGTATGTAGTAGGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396553.6
ENST00000444303.6
CDS-3UTR CAA 90 bp ATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATAGGGACAGGGCATCTTaGCTGTCCTCTTCTCGGAGC +
Preference number: 5 (lower is better)
Translates to: IPKEKSPSCYSEILTSEHRDRAS*LSSSRS
Trigger: GCTCCGAGAAGAGGACAGCAAAGATGCCCTGTCCCT...ATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CAA 90 bp GCACCTACTACATACCAGGCACTAGTAACACAGATAAAGAGTACACTGATAAAGTGCAGCTCCCTCTCCTaGGCTTCCTTTTGCCCGATG +
Preference number: 5 (lower is better)
Translates to: APTTYQALVTQIKSTLIKCSSLS*ASFCPM
Trigger: CATCGGGCAAAAGGAAGCCAAGGAGAGGGAGCTGCA...CTTTATCAGTGTACTCTTTATCTGTGTTACTAGTGCCTGGTATGTAGTAGGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396553.6
ENST00000444303.6
CDS-3UTR CAA 90 bp CCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATGTTTTGCTGTGGCGGCATTaGCAGAGACAGGGACTGGGA +
Preference number: 5 (lower is better)
Translates to: PKEKSPSCYSEILTSEHVLLWRH*QRQGLG
Trigger: TCCCAGTCCCTGTCTCTGCAAATGCCGCCACAGCAA...AACATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CAA 90 bp ATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATTTGCTGTGGCGGCATTaGCAGAGACAGGGACTGGGA +
Preference number: 5 (lower is better)
Translates to: IPKEKSPSCYSEILTSEHLLWRH*QRQGLG
Trigger: TCCCAGTCCCTGTCTCTGCAAATGCCGCCACAGCAA...ATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CAA 90 bp ATTTCTTCAGAGGCATCCTCTTCACAGAGGAAAGTCCTAGTTCGGAATCTTGACGTCTGGTATGTGTGCTaGATGAAGCGCAGCAGATGC +
Preference number: 5 (lower is better)
Translates to: ISSEASSSQRKVLVRNLDVWYVC*MKRSRC
Trigger: GCATCTGCTGCGCTTCATCAAGCACACATACCAGAC...GTCAAGATTCCGAACTAGGACTTTCCTCTGTGAAGAGGATGCCTCTGAAGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CAA 90 bp AACCTCCTTGACCATCCGAGCAAAGTACTCTCCTCCCAGATAGTTTTCAGTTTTGTCTGGTATGTGTGCTaGATGAAGCGCAGCAGATGC +
Preference number: 5 (lower is better)
Translates to: NLLDHPSKVLSSQIVFSFVWYVC*MKRSRC
Trigger: GCATCTGCTGCGCTTCATCAAGCACACATACCAGAC...AAAACTGAAAACTATCTGGGAGGAGAGTACTTTGCTCGGATGGTCAAGGAGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000533116.1
ENST00000534047.5
CDS-3UTR CAA 90 bp ATTTCTTCAGAGGCATCCTCTTCACAGAGGAAAGTCCTAGTTCGGAATCTTGACCTGGCCCCCACAGGGTaGTATTTGGAGTTGAACTTG +
Preference number: 5 (lower is better)
Translates to: ISSEASSSQRKVLVRNLDLAPTG*YLELNL
Trigger: CAAGTTCAACTCCAAATACAACCCTGTGGGGGCCAG...GTCAAGATTCCGAACTAGGACTTTCCTCTGTGAAGAGGATGCCTCTGAAGAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CAA 90 bp ATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATTCTGAGTACTGGTACTaGCTCTCCTCCAGCTCCCGG +
Preference number: 5 (lower is better)
Translates to: IPKEKSPSCYSEILTSEHSEYWY*LSSSSR
Trigger: CCGGGAGCTGGAGGAGAGCAAGTACCAGTACTCAGA...ATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CAA 90 bp CCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATGTTTCTGAGTACTGGTACTaGCTCTCCTCCAGCTCCCGG +
Preference number: 5 (lower is better)
Translates to: PKEKSPSCYSEILTSEHVSEYWY*LSSSSR
Trigger: CCGGGAGCTGGAGGAGAGCAAGTACCAGTACTCAGA...AACATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CAA 90 bp AATGAACAACTACCAATTAGCCTACCTGGGCCAATGGAGAAAAGTATGGCAGAATCCGGGTTTGGGCTCTaGTCGGAAAACATGTGGTCG +
Preference number: 5 (lower is better)
Translates to: NEQLPISLPGPMEKSMAESGFGL*SENMWS
Trigger: CGACCACATGTTTTCCGACAAGAGCCCAAACCCGGA...TTCTGCCATACTTTTCTCCATTGGCCCAGGTAGGCTAATTGGTAGTTGTTCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR CAA 90 bp GTGAAGAAACCAAGACTCAGAATAGGAGTGGCTGTTTTCATGAGTACATTTGGCTCCGGGTTTGGGCTCTaGTCGGAAAACATGTGGTCG +
Preference number: 5 (lower is better)
Translates to: VKKPRLRIGVAVFMSTFGSGFGL*SENMWS
Trigger: CGACCACATGTTTTCCGACAAGAGCCCAAACCCGGA...GCCAAATGTACTCATGAAAACAGCCACTCCTATTCTGAGTCTTGGTTTCTTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
CDS-3UTR CAA 90 bp CTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATTTCCGGGTTTGGGCTCTaGTCGGAAAACATGTGGTCG +
Preference number: 5 (lower is better)
Translates to: LISECHPDLSHICLSNIISGFGL*SENMWS
Trigger: CGACCACATGTTTTCCGACAAGAGCCCAAACCCGGA...AATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529834.5
ENST00000534047.5
CDS-3UTR CAA 90 bp CTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATTTCCAGACGTCCGGGTTaGGGCTCTTGTCGGAAAACA +
Preference number: 5 (lower is better)
Translates to: LISECHPDLSHICLSNIISRRPG*GSCRKT
Trigger: TGTTTTCCGACAAGAGCCCAAACCCGGACGTCTGGA...AATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529834.5
ENST00000534047.5
CDS-3UTR CAA 90 bp CAGATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGTCCCTGCGGAGGTTGTaGAGCACCATGATGTTGGCA +
Preference number: 5 (lower is better)
Translates to: QIPKEKSPSCYSEILTSESLRRL*STMMLA
Trigger: TGCCAACATCATGGTGCTCAACAACCTCCGCAGGGA...CTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGGGATCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CAA 90 bp AATGAACAACTACCAATTAGCCTACCTGGGCCAATGGAGAAAAGTATGGCAGAATCCCTGCGGAGGTTGTaGAGCACCATGATGTTGGCA +
Preference number: 5 (lower is better)
Translates to: NEQLPISLPGPMEKSMAESLRRL*STMMLA
Trigger: TGCCAACATCATGGTGCTCAACAACCTCCGCAGGGA...TTCTGCCATACTTTTCTCCATTGGCCCAGGTAGGCTAATTGGTAGTTGTTCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR CAA 90 bp CTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATTTCCCTGCGGAGGTTGTaGAGCACCATGATGTTGGCA +
Preference number: 5 (lower is better)
Translates to: LISECHPDLSHICLSNIISLRRL*STMMLA
Trigger: TGCCAACATCATGGTGCTCAACAACCTCCGCAGGGA...AATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529744.1
ENST00000529834.5
ENST00000534047.5
CDS-3UTR CAA 90 bp CAGATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGAATACCGGACTCTTCTaGAGGAGCAGCCCGTGGGAA +
Preference number: 5 (lower is better)
Translates to: QIPKEKSPSCYSEILTSENTGLF*RSSPWE
Trigger: TTCCCACGGGCTGCTCCTCAAGAAGAGTCCGGTATT...CTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGGGATCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CAA 90 bp CTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATTAATACCGGACTCTTCTaGAGGAGCAGCCCGTGGGAA +
Preference number: 5 (lower is better)
Translates to: LISECHPDLSHICLSNIINTGLF*RSSPWE
Trigger: TTCCCACGGGCTGCTCCTCAAGAAGAGTCCGGTATT...AATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529834.5
ENST00000534047.5
CDS-3UTR CAA 90 bp TCCTGGCCCCAACAGTTCAGGCACTGGCAGTTTCAAGAGAAATACTTGGAAAATGCTCAGCTTCCACACTaGAGCTGCAATGGCATATTC +
Preference number: 5 (lower is better)
Translates to: SWPQQFRHWQFQEKYLENAQLPH*SCNGIF
Trigger: GAATATGCCATTGCAGCTCAAGTGTGGAAGCTGAGC...ATTTTCCAAGTATTTCTCTTGAAACTGCCAGTGCCTGAACTGTTGGGGCCAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR CAA 90 bp TCAGAGGCATCCTCTTCACAGAGGAAAGTCCTAGTTCGGAATCTTGACCACTATGCTCAGCTTCCACACTaGAGCTGCAATGGCATATTC +
Preference number: 5 (lower is better)
Translates to: SEASSSQRKVLVRNLDHYAQLPH*SCNGIF
Trigger: GAATATGCCATTGCAGCTCAAGTGTGGAAGCTGAGC...ATAGTGGTCAAGATTCCGAACTAGGACTTTCCTCTGTGAAGAGGATGCCTCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CAA 90 bp TCCTCCCAGATAGTTTTCAGTTTTCAAATACAGGTCACGCAGCTCACTGGCCCCTTGTCCCAGAAACTTTaGCTTTTCCTGATGCGAGAG +
Preference number: 5 (lower is better)
Translates to: SSQIVFSFQIQVTQLTGPLSQKL*LFLMRE
Trigger: CTCTCGCATCAGGAAAAGCAAAAGTTTCTGGGACAA...GGGGCCAGTGAGCTGCGTGACCTGTATTTGAAAACTGAAAACTATCTGGGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000534047.5
CDS-3UTR CAA 90 bp AGTATAGACAAGTGCTCAGCTCCCAGATCCCCAAGGAGAAGTCACCATCTTGTTAGGAAGCTGAGCTCATaGCATAAGGTCTCATATCGG +
Preference number: 5 (lower is better)
Translates to: SIDKCSAPRSPRRSHHLVRKLSS*HKVSYR
Trigger: CCGATATGAGACCTTATGCAATGAGCTCAGCTTCCT...AACAAGATGGTGACTTCTCCTTGGGGATCTGGGAGCTGAGCACTTGTCTATACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR CAA 90 bp AAGACTGCATTTATACTTCCATATGCTGAATTGACCAGTGGAGGGGACAGGCATATGAACGCAGTCACTTaGACAGCCCCTGAGCATCAC +
Preference number: 5 (lower is better)
Translates to: KTAFILPYAELTSGGDRHMNAVT*TAPEHH
Trigger: GTGATGCTCAGGGGCTGTCAAAGTGACTGCGTTCAT...ATGCCTGTCCCCTCCACTGGTCAATTCAGCATATGGAAGTATAAATGCAGTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444303.6
CDS-3UTR CAA 90 bp CTACCAATTAGCCTACCTGGGCCAATGGAGAAAAGTATGGCAGAAAACCACATGTGGCCCCTGGGACCATaGTATCTTCTGAAGTCATCA +
Preference number: 5 (lower is better)
Translates to: LPISLPGPMEKSMAENHMWPLGP*YLLKSS
Trigger: TGATGACTTCAGAAGATACAATGGTCCCAGGGGCCA...CATGTGGTTTTCTGCCATACTTTTCTCCATTGGCCCAGGTAGGCTAATTGGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
CDS-3UTR CAA 90 bp GTGAAGAAACCAAGACTCAGAATAGGAGTGGCTGTTTTCATGAGTACATTTGGCAGCAACCCGCAAGCATaGGTTTCTTCCAGGCGTCCT +
Preference number: 5 (lower is better)
Translates to: VKKPRLRIGVAVFMSTFGSNPQA*VSSRRP
Trigger: AGGACGCCTGGAAGAAACCAATGCTTGCGGGTTGCT...GCCAAATGTACTCATGAAAACAGCCACTCCTATTCTGAGTCTTGGTTTCTTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444303.6
CDS TCA 90 bp CCATCTTGGGTCTTCAGGATATTGGATGAGACAAACAGGGCACCCTaGAATCAAAATCAGGGGTCCCTCTCTTTACTCTTCCCTTATGTC +
Preference number: 5 (lower is better)
Translates to: PSWVFRILDETNRAP*NQNQGSLSLLFPYV
Trigger: GACATAAGGGAAGAGTAAAGAGAGGGACCCCTGATTTTGATTTCAGGGTGCCCTGTTTGTCTCATCCAATATCCTGAAGACCCAAGATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527261.5
CDS-3UTR CAA 90 bp ATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATTCAGAGATGTTCAGCTaGGGAAACTGCCGCGGCATC +
Preference number: 5 (lower is better)
Translates to: IPKEKSPSCYSEILTSEHSEMFS*GNCRGI
Trigger: GATGCCGCGGCAGTTTCCCAAGCTGAACATCTCTGA...ATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CAA 90 bp GAAGAAACCAAGACTCAGAATAGGAGTGGCTGTTTTCATGAGTACATTTGGCTTTCAGAGATGTTCAGCTaGGGAAACTGCCGCGGCATC +
Preference number: 5 (lower is better)
Translates to: EETKTQNRSGCFHEYIWLSEMFS*GNCRGI
Trigger: GATGCCGCGGCAGTTTCCCAAGCTGAACATCTCTGA...AAGCCAAATGTACTCATGAAAACAGCCACTCCTATTCTGAGTCTTGGTTTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
CDS-3UTR CAA 90 bp AAAACACAATTTGTCAAGAAGGAAGTCTTCCATCTTAACTCCTTCAAAGTAGCCGGGGCCCTTCCAATCTaGCTGTGGCGGCATTTGCAG +
Preference number: 5 (lower is better)
Translates to: KTQFVKKEVFHLNSFKVAGALPI*LWRHLQ
Trigger: CTGCAAATGCCGCCACAGCAAGATTGGAAGGGCCCC...GGCTACTTTGAAGGAGTTAAGATGGAAGACTTCCTTCTTGACAAATTGTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000529507.5
CDS-3UTR CAA 90 bp TCCCAGATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGTCTGGTATGTGTGCTaGATGAAGCGCAGCAGATGC +
Preference number: 5 (lower is better)
Translates to: SQIPKEKSPSCYSEILTSVWYVC*MKRSRC
Trigger: GCATCTGCTGCGCTTCATCAAGCACACATACCAGAC...ACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGGGATCTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CAA 90 bp CTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATTGTCTGGTATGTGTGCTaGATGAAGCGCAGCAGATGC +
Preference number: 5 (lower is better)
Translates to: LISECHPDLSHICLSNIIVWYVC*MKRSRC
Trigger: GCATCTGCTGCGCTTCATCAAGCACACATACCAGAC...AATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529834.5
ENST00000534047.5
CDS-3UTR CAA 90 bp TCAGTTTTCAAATACAGGTCACGCAGCTCACTGGCCCCCACAGGGTTGTATTTGTATTTGGAGTTGAACTaGTCAAAGCGGTGGAATGTC +
Preference number: 5 (lower is better)
Translates to: SVFKYRSRSSLAPTGLYLYLELN*SKRWNV
Trigger: GACATTCCACCGCTTTGACAAGTTCAACTCCAAATA...CAAATACAACCCTGTGGGGGCCAGTGAGCTGCGTGACCTGTATTTGAAAACTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000533116.1
ENST00000534047.5
CDS-3UTR CAA 90 bp ATGGATGTGTGTGTCCACCTTTCTCACGTTATAGAAGTCCCGGTGGGGGTTACTTATTTGGAGTTGAACTaGTCAAAGCGGTGGAATGTC +
Preference number: 5 (lower is better)
Translates to: MDVCVHLSHVIEVPVGVTYLELN*SKRWNV
Trigger: GACATTCCACCGCTTTGACAAGTTCAACTCCAAATA...AGTAACCCCCACCGGGACTTCTATAACGTGAGAAAGGTGGACACACACATCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534047.5
CDS-3UTR CAA 90 bp CTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATTCTGGCCCCCACAGGGTaGTATTTGGAGTTGAACTTG +
Preference number: 5 (lower is better)
Translates to: LISECHPDLSHICLSNIILAPTG*YLELNL
Trigger: CAAGTTCAACTCCAAATACAACCCTGTGGGGGCCAG...AATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529834.5
ENST00000534047.5
CDS-3UTR CAA 90 bp GAAGAAACCAAGACTCAGAATAGGAGTGGCTGTTTTCATGAGTACATTTGGCTTTCCCTGCGGAGGTTGTaGAGCACCATGATGTTGGCA +
Preference number: 5 (lower is better)
Translates to: EETKTQNRSGCFHEYIWLSLRRL*STMMLA
Trigger: TGCCAACATCATGGTGCTCAACAACCTCCGCAGGGA...AAGCCAAATGTACTCATGAAAACAGCCACTCCTATTCTGAGTCTTGGTTTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
CDS-3UTR CAA 90 bp TCAGAGGCATCCTCTTCACAGAGGAAAGTCCTAGTTCGGAATCTTGACCACTATGAAACATGCAGTCCCTaGTGTAGGAATTCCCTCAGA +
Preference number: 5 (lower is better)
Translates to: SEASSSQRKVLVRNLDHYETCSP*CRNSLR
Trigger: TCTGAGGGAATTCCTACACAAGGGACTGCATGTTTC...ATAGTGGTCAAGATTCCGAACTAGGACTTTCCTCTGTGAAGAGGATGCCTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CAA 90 bp CTACCAATTAGCCTACCTGGGCCAATGGAGAAAAGTATGGCAGAAAACCACATGGAAACATGCAGTCCCTaGTGTAGGAATTCCCTCAGA +
Preference number: 5 (lower is better)
Translates to: LPISLPGPMEKSMAENHMETCSP*CRNSLR
Trigger: TCTGAGGGAATTCCTACACAAGGGACTGCATGTTTC...CATGTGGTTTTCTGCCATACTTTTCTCCATTGGCCCAGGTAGGCTAATTGGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR CAA 90 bp AGTATAGACAAGTGCTCAGCTCCCAGATCCCCAAGGAGAAGTCACCATCTTGTTTTGTCCCAGAAACTTTaGCTTTTCCTGATGCGAGAG +
Preference number: 5 (lower is better)
Translates to: SIDKCSAPRSPRRSHHLVLSQKL*LFLMRE
Trigger: CTCTCGCATCAGGAAAAGCAAAAGTTTCTGGGACAA...AACAAGATGGTGACTTCTCCTTGGGGATCTGGGAGCTGAGCACTTGTCTATACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR CAA 90 bp CTACCAATTAGCCTACCTGGGCCAATGGAGAAAAGTATGGCAGAAAACCACATGAGGAAGCTGAGCTCATaGCATAAGGTCTCATATCGG +
Preference number: 5 (lower is better)
Translates to: LPISLPGPMEKSMAENHMRKLSS*HKVSYR
Trigger: CCGATATGAGACCTTATGCAATGAGCTCAGCTTCCT...CATGTGGTTTTCTGCCATACTTTTCTCCATTGGCCCAGGTAGGCTAATTGGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR CAA 90 bp ATCCTGGCCCCAACAGTTCAGGCACTGGCAGTTTCAAGAGAAATACTTGGAAAAAGGAAGCTGAGCTCATaGCATAAGGTCTCATATCGG +
Preference number: 5 (lower is better)
Translates to: ILAPTVQALAVSREILGKRKLSS*HKVSYR
Trigger: CCGATATGAGACCTTATGCAATGAGCTCAGCTTCCT...TTTTCCAAGTATTTCTCTTGAAACTGCCAGTGCCTGAACTGTTGGGGCCAGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR CAA 90 bp GGTCTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCAGGAAGCTGAGCTCATaGCATAAGGTCTCATATCGG +
Preference number: 5 (lower is better)
Translates to: GLISECHPDLSHICLSNIRKLSS*HKVSYR
Trigger: CCGATATGAGACCTTATGCAATGAGCTCAGCTTCCT...GATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529744.1
ENST00000534047.5
CDS-3UTR CAA 90 bp GTGAAGAAACCAAGACTCAGAATAGGAGTGGCTGTTTTCATGAGTACATTTGGCATGAACGCAGTCACTTaGACAGCCCCTGAGCATCAC +
Preference number: 5 (lower is better)
Translates to: VKKPRLRIGVAVFMSTFGMNAVT*TAPEHH
Trigger: GTGATGCTCAGGGGCTGTCAAAGTGACTGCGTTCAT...GCCAAATGTACTCATGAAAACAGCCACTCCTATTCTGAGTCTTGGTTTCTTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
CDS-3UTR CAA 90 bp AAATTAGGAACAAGTATAGACAAGTGCTCAGCTCCCAGATCCCCAAGGAGAAGTTGGCCCCTGGGACCATaGTATCTTCTGAAGTCATCA +
Preference number: 5 (lower is better)
Translates to: KLGTSIDKCSAPRSPRRSWPLGP*YLLKSS
Trigger: TGATGACTTCAGAAGATACAATGGTCCCAGGGGCCA...ACTTCTCCTTGGGGATCTGGGAGCTGAGCACTTGTCTATACTTGTTCCTAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
CDS-3UTR CAA 90 bp AAGGAACAGAGATCATCTAGTCCTGTGCTTTTTGAAGTTCTTCGTTCAAATGAACCCCGCACAGGTGACTaGCTCCCTGTAGTTGCAGCA +
Preference number: 5 (lower is better)
Translates to: KEQRSSSPVLFEVLRSNEPRTGD*LPVVAA
Trigger: TGCTGCAACTACAGGGAGCAAGTCACCTGTGCGGGG...TTCATTTGAACGAAGAACTTCAAAAAGCACAGGACTAGATGATCTCTGTTCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444303.6
CDS-3UTR CAA 90 bp AGTATAGACAAGTGCTCAGCTCCCAGATCCCCAAGGAGAAGTCACCATCTTGTTACTTTGTTCCCATGTTaGAGAAGGGACAAGAGAGAG +
Preference number: 5 (lower is better)
Translates to: SIDKCSAPRSPRRSHHLVTLFPC*RRDKRE
Trigger: CTCTCTCTTGTCCCTTCTCAAACATGGGAACAAAGT...AACAAGATGGTGACTTCTCCTTGGGGATCTGGGAGCTGAGCACTTGTCTATACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529507.5
CDS CCA 90 bp ATGTCCAAGAAGAGCCCATCTACAGGTCTGAAGGTTATGCTCCTCTaGTTCTTCTGTCTTCCTTCTGTCTTCTCTTTCCTCTGTTCTTTC +
Preference number: 5 (lower is better)
Translates to: MSKKSPSTGLKVMLL*FFCLPSVFSFLCSF
Trigger: GAAAGAACAGAGGAAAGAGAAGACAGAAGGAAGACAGAAGAACCAGAGGAGCATAACCTTCAGACCTGTAGATGGGCTCTTCTTGGACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532966.1
CDS-3UTR CAA 90 bp AAGGAACAGAGATCATCTAGTCCTGTGCTTTTTGAAGTTCTTCGTTCAAATGAACGCCAGGAGCCGGACTaGCTCATCCACTTCAGAGAT +
Preference number: 5 (lower is better)
Translates to: KEQRSSSPVLFEVLRSNERQEPD*LIHFRD
Trigger: ATCTCTGAAGTGGATGAGCAAGTCCGGCTCCTGGCG...TTCATTTGAACGAAGAACTTCAAAAAGCACAGGACTAGATGATCTCTGTTCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
CDS-3UTR CAA 90 bp AAAACACAATTTGTCAAGAAGGAAGTCTTCCATCTTAACTCCTTCAAAGTAGCCCGCCAGGAGCCGGACTaGCTCATCCACTTCAGAGAT +
Preference number: 5 (lower is better)
Translates to: KTQFVKKEVFHLNSFKVARQEPD*LIHFRD
Trigger: ATCTCTGAAGTGGATGAGCAAGTCCGGCTCCTGGCG...GGCTACTTTGAAGGAGTTAAGATGGAAGACTTCCTTCTTGACAAATTGTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR CAA 90 bp AAAACACAATTTGTCAAGAAGGAAGTCTTCCATCTTAACTCCTTCAAAGTAGCCAGGGACAGGGCATCTTaGCTGTCCTCTTCTCGGAGC +
Preference number: 5 (lower is better)
Translates to: KTQFVKKEVFHLNSFKVARDRAS*LSSSRS
Trigger: GCTCCGAGAAGAGGACAGCAAAGATGCCCTGTCCCT...GGCTACTTTGAAGGAGTTAAGATGGAAGACTTCCTTCTTGACAAATTGTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR CAA 90 bp GAACAGAGATCATCTAGTCCTGTGCTTTTTGAAGTTCTTCGTTCAAATGAAAATCTCCTTGGCTTCCTTTaGCCCGATGGGGCAGTCCTC +
Preference number: 5 (lower is better)
Translates to: EQRSSSPVLFEVLRSNENLLGFL*PDGAVL
Trigger: GAGGACTGCCCCATCGGGCAAAAGGAAGCCAAGGAG...ATTTTCATTTGAACGAAGAACTTCAAAAAGCACAGGACTAGATGATCTCTGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
CDS-3UTR CAA 90 bp AAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATGTTAACTGCAGCTCCCTCTCCTaGGCTTCCTTTTGCCCGATG +
Preference number: 5 (lower is better)
Translates to: KEKSPSCYSEILTSEHVNCSSLS*ASFCPM
Trigger: CATCGGGCAAAAGGAAGCCAAGGAGAGGGAGCTGCA...GTTAACATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CAA 90 bp GCACCTACTACATACCAGGCACTAGTAACACAGATAAAGAGTACACTGATAAAGGTCTGGTATGTGTGCTaGATGAAGCGCAGCAGATGC +
Preference number: 5 (lower is better)
Translates to: APTTYQALVTQIKSTLIKVWYVC*MKRSRC
Trigger: GCATCTGCTGCGCTTCATCAAGCACACATACCAGAC...CTTTATCAGTGTACTCTTTATCTGTGTTACTAGTGCCTGGTATGTAGTAGGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396553.6
ENST00000444303.6
CDS-3UTR CAA 90 bp GAAGAAACCAAGACTCAGAATAGGAGTGGCTGTTTTCATGAGTACATTTGGCTTCTGGCCCCCACAGGGTaGTATTTGGAGTTGAACTTG +
Preference number: 5 (lower is better)
Translates to: EETKTQNRSGCFHEYIWLLAPTG*YLELNL
Trigger: CAAGTTCAACTCCAAATACAACCCTGTGGGGGCCAG...AAGCCAAATGTACTCATGAAAACAGCCACTCCTATTCTGAGTCTTGGTTTCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
CDS-3UTR CAA 90 bp CCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATGTTCTGGCCCCCACAGGGTaGTATTTGGAGTTGAACTTG +
Preference number: 5 (lower is better)
Translates to: PKEKSPSCYSEILTSEHVLAPTG*YLELNL
Trigger: CAAGTTCAACTCCAAATACAACCCTGTGGGGGCCAG...AACATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CAA 90 bp AAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATGTTAACTCCCGGGCAACCTCCTaGACCATCCGAGCAAAGTAC +
Preference number: 5 (lower is better)
Translates to: KEKSPSCYSEILTSEHVNSRATS*TIRAKY
Trigger: GTACTTTGCTCGGATGGTCAAGGAGGTTGCCCGGGA...GTTAACATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CAA 90 bp GTGAAGAAACCAAGACTCAGAATAGGAGTGGCTGTTTTCATGAGTACATTTGGCAAGCTCTCGATGATCTaGGGGGTTGATAGTGGCCTT +
Preference number: 5 (lower is better)
Translates to: VKKPRLRIGVAVFMSTFGKLSMI*GVDSGL
Trigger: AAGGCCACTATCAACCCCCAAGATCATCGAGAGCTT...GCCAAATGTACTCATGAAAACAGCCACTCCTATTCTGAGTCTTGGTTTCTTCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
CDS-3UTR CAA 90 bp CAGATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGAAGCTCTCGATGATCTaGGGGGTTGATAGTGGCCTT +
Preference number: 5 (lower is better)
Translates to: QIPKEKSPSCYSEILTSEKLSMI*GVDSGL
Trigger: AAGGCCACTATCAACCCCCAAGATCATCGAGAGCTT...CTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGGGATCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CAA 90 bp CTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATTAAGCTCTCGATGATCTaGGGGGTTGATAGTGGCCTT +
Preference number: 5 (lower is better)
Translates to: LISECHPDLSHICLSNIIKLSMI*GVDSGL
Trigger: AAGGCCACTATCAACCCCCAAGATCATCGAGAGCTT...AATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529834.5
ENST00000534047.5
CDS-3UTR CAA 90 bp CTACCAATTAGCCTACCTGGGCCAATGGAGAAAAGTATGGCAGAAAACCACATGTCGAGGAACAAACTGTaGTTGCTAAGAGGAGACATG +
Preference number: 5 (lower is better)
Translates to: LPISLPGPMEKSMAENHMSRNKL*LLRGDM
Trigger: CATGTCTCCTCTTAGCAACAACAGTTTGTTCCTCGA...CATGTGGTTTTCTGCCATACTTTTCTCCATTGGCCCAGGTAGGCTAATTGGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR CAA 90 bp ATCCTGGCCCCAACAGTTCAGGCACTGGCAGTTTCAAGAGAAATACTTGGAAAATCGAGGAACAAACTGTaGTTGCTAAGAGGAGACATG +
Preference number: 5 (lower is better)
Translates to: ILAPTVQALAVSREILGKSRNKL*LLRGDM
Trigger: CATGTCTCCTCTTAGCAACAACAGTTTGTTCCTCGA...TTTTCCAAGTATTTCTCTTGAAACTGCCAGTGCCTGAACTGTTGGGGCCAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR CAA 90 bp ATTTCTTCAGAGGCATCCTCTTCACAGAGGAAAGTCCTAGTTCGGAATCTTGACGAAACATGCAGTCCCTaGTGTAGGAATTCCCTCAGA +
Preference number: 5 (lower is better)
Translates to: ISSEASSSQRKVLVRNLDETCSP*CRNSLR
Trigger: TCTGAGGGAATTCCTACACAAGGGACTGCATGTTTC...GTCAAGATTCCGAACTAGGACTTTCCTCTGTGAAGAGGATGCCTCTGAAGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CAA 90 bp AGGTCTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATGAAACATGCAGTCCCTaGTGTAGGAATTCCCTCAGA +
Preference number: 5 (lower is better)
Translates to: RSHIGMPSGSEPHLSFEYETCSP*CRNSLR
Trigger: TCTGAGGGAATTCCTACACAAGGGACTGCATGTTTC...ATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAGACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529744.1
ENST00000534047.5
CDS-3UTR CAA 90 bp TCCCAGATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGCTCAGCTTCCACACTaGAGCTGCAATGGCATATTC +
Preference number: 5 (lower is better)
Translates to: SQIPKEKSPSCYSEILTSAQLPH*SCNGIF
Trigger: GAATATGCCATTGCAGCTCAAGTGTGGAAGCTGAGC...ACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGGGATCTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CAA 90 bp ATCTCTTCTGATTTCATAGCATCAGACAGGAAGCTGAGCTCATTGCATAAGGTCGCTCAGCTTCCACACTaGAGCTGCAATGGCATATTC +
Preference number: 5 (lower is better)
Translates to: ISSDFIASDRKLSSLHKVAQLPH*SCNGIF
Trigger: GAATATGCCATTGCAGCTCAAGTGTGGAAGCTGAGC...GACCTTATGCAATGAGCTCAGCTTCCTGTCTGATGCTATGAAATCAGAAGAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529744.1
ENST00000534047.5
CDS-3UTR CAA 90 bp TATAGACAAGTGCTCAGCTCCCAGATCCCCAAGGAGAAGTCACCATCTTGTTACAAAACCACATGTTACTaGGCATCTGACCAGGGAAAA +
Preference number: 5 (lower is better)
Translates to: YRQVLSSQIPKEKSPSCYKTTCY*ASDQGK
Trigger: TTTTCCCTGGTCAGATGCCAAGTAACATGTGGTTTT...GTAACAAGATGGTGACTTCTCCTTGGGGATCTGGGAGCTGAGCACTTGTCTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR CAA 90 bp CAGATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATCTCAGCTGGTACTaGGGGTCAGCTGTCTACTTA +
Preference number: 5 (lower is better)
Translates to: QIPKEKSPSCYSEILTSEHLSWY*GSAVYL
Trigger: TAAGTAGACAGCTGACCCCAAGTACCAGCTGAGATG...CTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGGGATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529507.5
CDS-3UTR CAA 90 bp AAAACACAATTTGTCAAGAAGGAAGTCTTCCATCTTAACTCCTTCAAAGTAGCCTCAGAGATGTTCAGCTaGGGAAACTGCCGCGGCATC +
Preference number: 5 (lower is better)
Translates to: KTQFVKKEVFHLNSFKVASEMFS*GNCRGI
Trigger: GATGCCGCGGCAGTTTCCCAAGCTGAACATCTCTGA...GGCTACTTTGAAGGAGTTAAGATGGAAGACTTCCTTCTTGACAAATTGTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR CAA 90 bp CTACCAATTAGCCTACCTGGGCCAATGGAGAAAAGTATGGCAGAAAACCACATGTGCTCCAGCATCTTCTaGTTATCATACACAAAGAGG +
Preference number: 5 (lower is better)
Translates to: LPISLPGPMEKSMAENHMCSSIF*LSYTKR
Trigger: CCTCTTTGTGTATGATAACAAGAAGATGCTGGAGCA...CATGTGGTTTTCTGCCATACTTTTCTCCATTGGCCCAGGTAGGCTAATTGGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR CAA 90 bp TCAGAGGCATCCTCTTCACAGAGGAAAGTCCTAGTTCGGAATCTTGACCACTATTATTTGGAGTTGAACTaGTCAAAGCGGTGGAATGTC +
Preference number: 5 (lower is better)
Translates to: SEASSSQRKVLVRNLDHYYLELN*SKRWNV
Trigger: GACATTCCACCGCTTTGACAAGTTCAACTCCAAATA...ATAGTGGTCAAGATTCCGAACTAGGACTTTCCTCTGTGAAGAGGATGCCTCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CAA 90 bp CTACCAATTAGCCTACCTGGGCCAATGGAGAAAAGTATGGCAGAAAACCACATGTATTTGGAGTTGAACTaGTCAAAGCGGTGGAATGTC +
Preference number: 5 (lower is better)
Translates to: LPISLPGPMEKSMAENHMYLELN*SKRWNV
Trigger: GACATTCCACCGCTTTGACAAGTTCAACTCCAAATA...CATGTGGTTTTCTGCCATACTTTTCTCCATTGGCCCAGGTAGGCTAATTGGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR CAA 90 bp GAAGAAACCAAGACTCAGAATAGGAGTGGCTGTTTTCATGAGTACATTTGGCTTAAGCTCTCGATGATCTaGGGGGTTGATAGTGGCCTT +
Preference number: 5 (lower is better)
Translates to: EETKTQNRSGCFHEYIWLKLSMI*GVDSGL
Trigger: AAGGCCACTATCAACCCCCAAGATCATCGAGAGCTT...AAGCCAAATGTACTCATGAAAACAGCCACTCCTATTCTGAGTCTTGGTTTCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
CDS-3UTR CAA 90 bp AAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATGTTAACTCCGGGTTTGGGCTCTaGTCGGAAAACATGTGGTCG +
Preference number: 5 (lower is better)
Translates to: KEKSPSCYSEILTSEHVNSGFGL*SENMWS
Trigger: CGACCACATGTTTTCCGACAAGAGCCCAAACCCGGA...GTTAACATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CAA 90 bp AAGGAACAGAGATCATCTAGTCCTGTGCTTTTTGAAGTTCTTCGTTCAAATGAATCCAGACGTCCGGGTTaGGGCTCTTGTCGGAAAACA +
Preference number: 5 (lower is better)
Translates to: KEQRSSSPVLFEVLRSNESRRPG*GSCRKT
Trigger: TGTTTTCCGACAAGAGCCCAAACCCGGACGTCTGGA...TTCATTTGAACGAAGAACTTCAAAAAGCACAGGACTAGATGATCTCTGTTCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
CDS-3UTR CAA 90 bp GCTTTCTACTTGGCCCCTGGGACCATTGTATCTTCTGAAGTCATCATAGTAGATTCGAGGAACAAACTGTaGTTGCTAAGAGGAGACATG +
Preference number: 5 (lower is better)
Translates to: AFYLAPGTIVSSEVIIVDSRNKL*LLRGDM
Trigger: CATGTCTCCTCTTAGCAACAACAGTTTGTTCCTCGA...ATCTACTATGATGACTTCAGAAGATACAATGGTCCCAGGGGCCAAGTAGAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396553.6
ENST00000444303.6
CDS-3UTR CAA 90 bp AACCTCCTTGACCATCCGAGCAAAGTACTCTCCTCCCAGATAGTTTTCAGTTTTTCGAGGAACAAACTGTaGTTGCTAAGAGGAGACATG +
Preference number: 5 (lower is better)
Translates to: NLLDHPSKVLSSQIVFSFSRNKL*LLRGDM
Trigger: CATGTCTCCTCTTAGCAACAACAGTTTGTTCCTCGA...AAAACTGAAAACTATCTGGGAGGAGAGTACTTTGCTCGGATGGTCAAGGAGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534047.5
CDS-3UTR CAA 90 bp CTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATTGAAACATGCAGTCCCTaGTGTAGGAATTCCCTCAGA +
Preference number: 5 (lower is better)
Translates to: LISECHPDLSHICLSNIIETCSP*CRNSLR
Trigger: TCTGAGGGAATTCCTACACAAGGGACTGCATGTTTC...AATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529744.1
ENST00000529834.5
ENST00000534047.5
CDS-3UTR CAA 90 bp GAAGAAACCAAGACTCAGAATAGGAGTGGCTGTTTTCATGAGTACATTTGGCTTGCTCAGCTTCCACACTaGAGCTGCAATGGCATATTC +
Preference number: 5 (lower is better)
Translates to: EETKTQNRSGCFHEYIWLAQLPH*SCNGIF
Trigger: GAATATGCCATTGCAGCTCAAGTGTGGAAGCTGAGC...AAGCCAAATGTACTCATGAAAACAGCCACTCCTATTCTGAGTCTTGGTTTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
CDS-3UTR CAA 90 bp AGGTCTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATTTGTCCCAGAAACTTTaGCTTTTCCTGATGCGAGAG +
Preference number: 5 (lower is better)
Translates to: RSHIGMPSGSEPHLSFEYLSQKL*LFLMRE
Trigger: CTCTCGCATCAGGAAAAGCAAAAGTTTCTGGGACAA...ATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAGACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529744.1
ENST00000534047.5
CDS-3UTR CAA 90 bp TCTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATAGGAAGCTGAGCTCATaGCATAAGGTCTCATATCGG +
Preference number: 5 (lower is better)
Translates to: SHIGMPSGSEPHLSFEYHRKLSS*HKVSYR
Trigger: CCGATATGAGACCTTATGCAATGAGCTCAGCTTCCT...ATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529744.1
ENST00000534047.5
CDS-3UTR CAA 90 bp TATAGACAAGTGCTCAGCTCCCAGATCCCCAAGGAGAAGTCACCATCTTGTTACGGAGAAGTCACCATCTaGTTACTCAGAAATACTAAC +
Preference number: 5 (lower is better)
Translates to: YRQVLSSQIPKEKSPSCYGEVTI*LLRNTN
Trigger: GTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCC...GTAACAAGATGGTGACTTCTCCTTGGGGATCTGGGAGCTGAGCACTTGTCTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR CAA 90 bp CCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATGTTTGGCCCCTGGGACCATaGTATCTTCTGAAGTCATCA +
Preference number: 5 (lower is better)
Translates to: PKEKSPSCYSEILTSEHVWPLGP*YLLKSS
Trigger: TGATGACTTCAGAAGATACAATGGTCCCAGGGGCCA...AACATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
CDS-3UTR CAA 90 bp CTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATTTCGAGGAACAAACTGTaGTTGCTTCTTGAGGAGCAG +
Preference number: 5 (lower is better)
Translates to: LISECHPDLSHICLSNIISRNKL*LLLEEQ
Trigger: CTGCTCCTCAAGAAGCAACAACAGTTTGTTCCTCGA...AATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529744.1
CDS CCA 90 bp AGAAAGCAAGTGTTCAAAATTCAAAGAATGAACTGTTCAACTAGGTaGGCTTCCATTTTCCCAAACTCAGGGAATCTGCAGCACCTGGCA +
Preference number: 5 (lower is better)
Translates to: RKQVFKIQRMNCSTR*ASIFPNSGNLQHLA
Trigger: TGCCAGGTGCTGCAGATTCCCTGAGTTTGGGAAAATGGAAGCCCACCTAGTTGAACAGTTCATTCTTTGAATTTTGAACACTTGCTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529507.5
CDS-3UTR CAA 90 bp AGTATAGACAAGTGCTCAGCTCCCAGATCCCCAAGGAGAAGTCACCATCTTGTTTTACTCTTCAACTCTTaGAACTCGGACATTTCGTTT +
Preference number: 5 (lower is better)
Translates to: SIDKCSAPRSPRRSHHLVLLFNS*NSDISF
Trigger: AAACGAAATGTCCGAGTTCAAAGAGTTGAAGAGTAA...AACAAGATGGTGACTTCTCCTTGGGGATCTGGGAGCTGAGCACTTGTCTATACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000529507.5
CDS-3UTR CAA 90 bp AAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATGTTAACCTGGCCCCCACAGGGTaGTATTTGGAGTTGAACTTG +
Preference number: 5 (lower is better)
Translates to: KEKSPSCYSEILTSEHVNLAPTG*YLELNL
Trigger: CAAGTTCAACTCCAAATACAACCCTGTGGGGGCCAG...GTTAACATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CAA 90 bp GAACAGAGATCATCTAGTCCTGTGCTTTTTGAAGTTCTTCGTTCAAATGAAAATTCCAGACGTCCGGGTTaGGGCTCTTGTCGGAAAACA +
Preference number: 5 (lower is better)
Translates to: EQRSSSPVLFEVLRSNENSRRPG*GSCRKT
Trigger: TGTTTTCCGACAAGAGCCCAAACCCGGACGTCTGGA...ATTTTCATTTGAACGAAGAACTTCAAAAAGCACAGGACTAGATGATCTCTGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
CDS-3UTR CAA 90 bp CAGATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGTCGAGGAACAAACTGTaGTTGCTAAGAGGAGACATG +
Preference number: 5 (lower is better)
Translates to: QIPKEKSPSCYSEILTSESRNKL*LLRGDM
Trigger: CATGTCTCCTCTTAGCAACAACAGTTTGTTCCTCGA...CTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGGGATCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CAA 90 bp CTCATATCGGAATGCCATCCGGATCTGAGCCACATTTGTCTTTCGAATATCATTTCGAGGAACAAACTGTaGTTGCTAAGAGGAGACATG +
Preference number: 5 (lower is better)
Translates to: LISECHPDLSHICLSNIISRNKL*LLRGDM
Trigger: CATGTCTCCTCTTAGCAACAACAGTTTGTTCCTCGA...AATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGATATGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529834.5
ENST00000534047.5
CDS-3UTR CAA 90 bp ATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGCATGAAACATGCAGTCCCTaGTGTAGGAATTCCCTCAGA +
Preference number: 5 (lower is better)
Translates to: IPKEKSPSCYSEILTSEHETCSP*CRNSLR
Trigger: TCTGAGGGAATTCCTACACAAGGGACTGCATGTTTC...ATGCTCACTTGTTAGTATTTCTGAGTAACAAGATGGTGACTTCTCCTTGGGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
ENST00000528723.5
ENST00000529507.5
CDS-3UTR CAA 90 bp GTGAAGAAACCAAGACTCAGAATAGGAGTGGCTGTTTTCATGAGTACATTTGGCTTGTCCCAGAAACTTTaGCTTTTCCTGATGCGAGAG +
Preference number: 5 (lower is better)
Translates to: VKKPRLRIGVAVFMSTFGLSQKL*LFLMRE
Trigger: CTCTCGCATCAGGAAAAGCAAAAGTTTCTGGGACAA...GCCAAATGTACTCATGAAAACAGCCACTCCTATTCTGAGTCTTGGTTTCTTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396553.6
ENST00000396554.7
ENST00000444303.6
CDS-3UTR CAA 90 bp CAGATCCCCAAGGAGAAGTCACCATCTTGTTACTCAGAAATACTAACAAGTGAGTTGTCCCAGAAACTTTaGCTTTTCCTGATGCGAGAG +