RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AMOTL2 (Homo sapiens)

Ensembl gene IDs: ENSG00000114019

Ensembl transcript IDs: ENST00000249883.10, ENST00000422605.6, ENST00000502491.1, ENST00000504234.1, ENST00000505596.1, ENST00000506107.1, ENST00000506326.1, ENST00000510560.1, ENST00000511759.1, ENST00000512955.1, ENST00000513145.1, ENST00000514516.5, ENST00000515172.1

Found 855 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGCTGCCATGTGGGTGTTTCACCCCAATTCCAAAGCATCTGGTGCTaGTTTAGGGCGCTGGGCATGGGTAGCTTGAGGAGCCAGCCTCCT +
Preference number: 1 (lower is better)
Translates to: GCHVGVSPQFQSIWC*FRALGMGSLRSQPP
Trigger: AGGAGGCTGGCTCCTCAAGCTACCCATGCCCAGCGCCCTAAAGCAGCACCAGATGCTTTGGAATTGGGGTGAAACACCCACATGGCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
3UTR GCA 90 bp GCAGGCTGCCATGTGGGTGTTTCACCCCAATTCCAAAGCATCTGGTaGTGCTTTAGGGCGCTGGGCATGGGTAGCTTGAGGAGCCAGCCT +
Preference number: 1 (lower is better)
Translates to: AGCHVGVSPQFQSIW*CFRALGMGSLRSQP
Trigger: AGGCTGGCTCCTCAAGCTACCCATGCCCAGCGCCCTAAAGCAGCACCAGATGCTTTGGAATTGGGGTGAAACACCCACATGGCAGCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
3UTR CCA 90 bp AAAGAACTGGTACCGGGTAGGGCCACCGAAGCCCACCTGGGGGCATaGCAGATGTCTGTTCACGGTGGCTCATTTCATCTGGCTCAGGGT +
Preference number: 1 (lower is better)
Translates to: KELVPGRATEAHLGA*QMSVHGGSFHLAQG
Trigger: ACCCTGAGCCAGATGAAATGAGCCACCGTGAACAGACATCTGCCATGCCCCCAGGTGGGCTTCGGTGGCCCTACCCGGTACCAGTTCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
3UTR TCA 90 bp TGCCTGACTGACAACTGGCAGGGCAGAGGGAGCTCAGCTCCTTTCTaGGCTGTCAGTTGCTACCCCAGTAGCAGGCCTTGGGCAAGAAGT +
Preference number: 1 (lower is better)
Translates to: CLTDNWQGRGSSAPF*AVSCYPSSRPWARS
Trigger: ACTTCTTGCCCAAGGCCTGCTACTGGGGTAGCAACTGACAGCTCAGAAAGGAGCTGAGCTCCCTCTGCCCTGCCAGTTGTCAGTCAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
3UTR CCA 90 bp GGCCACCGAAGCCCACCTGGGGGCATGGCAGATGTCTGTTCACGGTaGCTCATTTCATCTGGCTCAGGGTTTATGACCAAACTGACAGGA +
Preference number: 1 (lower is better)
Translates to: GHRSPPGGMADVCSR*LISSGSGFMTKLTG
Trigger: TCCTGTCAGTTTGGTCATAAACCCTGAGCCAGATGAAATGAGCCACCGTGAACAGACATCTGCCATGCCCCCAGGTGGGCTTCGGTGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
3UTR CCA 90 bp TTTCTCAGAAAGAACTGGTACCGGGTAGGGCCACCGAAGCCCACCTaGGGGCATGGCAGATGTCTGTTCACGGTGGCTCATTTCATCTGG +
Preference number: 1 (lower is better)
Translates to: FLRKNWYRVGPPKPT*GHGRCLFTVAHFIW
Trigger: CCAGATGAAATGAGCCACCGTGAACAGACATCTGCCATGCCCCCAGGTGGGCTTCGGTGGCCCTACCCGGTACCAGTTCTTTCTGAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
3UTR CCA 90 bp GAAGTCAAGGCTGAATCCTCATTCTCCATAAGGCCCGGAGGAATGTaGGCTAAGAAGCAGAGTCTTCTGGGGGTGCCGGTGCTCTCACAG +
Preference number: 1 (lower is better)
Translates to: EVKAESSFSIRPGGM*AKKQSLLGVPVLSQ
Trigger: CTGTGAGAGCACCGGCACCCCCAGAAGACTCTGCTTCTTAGCCCACATTCCTCCGGGCCTTATGGAGAATGAGGATTCAGCCTTGACTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
3UTR TCA 90 bp ACGTTGGCTGGAACCAAACTTAGCCAGAGAACAATATGGCTGACTTaGTTAGTGAACCAGTCCACCTGGTGTCCACGGGCAGCCGTCCGT +
Preference number: 1 (lower is better)
Translates to: TLAGTKLSQRTIWLT*LVNQSTWCPRAAVR
Trigger: ACGGACGGCTGCCCGTGGACACCAGGTGGACTGGTTCACTAATCAAGTCAGCCATATTGTTCTCTGGCTAAGTTTGGTTCCAGCCAACGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
3UTR CCA 90 bp AAGACACTTATGCTAACAAGACATCTCCAGTTTCTCAGAAAGAACTaGTACCGGGTAGGGCCACCGAAGCCCACCTGGGGGCATGGCAGA +
Preference number: 1 (lower is better)
Translates to: KTLMLTRHLQFLRKN*YRVGPPKPTWGHGR
Trigger: TCTGCCATGCCCCCAGGTGGGCTTCGGTGGCCCTACCCGGTACCAGTTCTTTCTGAGAAACTGGAGATGTCTTGTTAGCATAAGTGTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
3UTR TCA 90 bp AGATCCTGGGAATCGAGCAGCTTTAACATCCACGGGCCAGGAACTTaGGGAGGAGGCATAACTGGGAGGCCAGTCAGAAGTTTCAGAAAC +
Preference number: 1 (lower is better)
Translates to: RSWESSSFNIHGPGT*GGGITGRPVRSFRN
Trigger: GTTTCTGAAACTTCTGACTGGCCTCCCAGTTATGCCTCCTCCTCAAGTTCCTGGCCCGTGGATGTTAAAGCTGCTCGATTCCCAGGATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
3UTR CCA 90 bp GAGTGGGGGAAGGATAAAGCCATCTTTGGACACCCACTCCCACTGTaGATAACCACAGCGTGTGGCCGAACAAAGCTGATTAGAACACAG +
Preference number: 1 (lower is better)
Translates to: EWGKDKAIFGHPLPL*ITTACGRTKLIRTQ
Trigger: CTGTGTTCTAATCAGCTTTGTTCGGCCACACGCTGTGGTTATCCACAGTGGGAGTGGGTGTCCAAAGATGGCTTTATCCTTCCCCCACTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249883.10
3UTR GCA 90 bp GGAGGGAGGCGGTGGCTAAGAACATGCACATTCTTGAATGTCCTCTaGATGGTGCCTGGCCTTCTGGATGGTTTCGGACAAAACTTTATG +
Preference number: 1 (lower is better)
Translates to: GGRRWLRTCTFLNVL*MVPGLLDGFGQNFM
Trigger: CATAAAGTTTTGTCCGAAACCATCCAGAAGGCCAGGCACCATGCAGAGGACATTCAAGAATGTGCATGTTCTTAGCCACCGCCTCCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249883.10
3UTR GCA 90 bp AGGCCTCAGTCTTCTGTTCCACAAGAAAGGGAATTATATACAAACTaGGCACTGTCTCCCAGTCCACTTAAATGGCCCCTCACCCACAGC +
Preference number: 1 (lower is better)
Translates to: RPQSSVPQERELYTN*ALSPSPLKWPLTHS
Trigger: GCTGTGGGTGAGGGGCCATTTAAGTGGACTGGGAGACAGTGCGCAGTTTGTATATAATTCCCTTTCTTGTGGAACAGAAGACTGAGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
3UTR CCA 90 bp GTGGCTAAGAACATGCACATTCTTGAATGTCCTCTGCATGGTGCCTaGCCTTCTGGATGGTTTCGGACAAAACTTTATGTGCTAGGTGGG +
Preference number: 1 (lower is better)
Translates to: VAKNMHILECPLHGA*PSGWFRTKLYVLGG
Trigger: CCCACCTAGCACATAAAGTTTTGTCCGAAACCATCCAGAAGGCCAGGCACCATGCAGAGGACATTCAAGAATGTGCATGTTCTTAGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249883.10
3UTR TCA 90 bp TTTGAATTGGAGCAATATGCTTTCCTGAGCATCAGGAAAGAGTGGTaGTGTCACAGCAAAGGAGGGAGGCGGTGGCTAAGAACATGCACA +
Preference number: 1 (lower is better)
Translates to: FELEQYAFLSIRKEW*CHSKGGRRWLRTCT
Trigger: TGTGCATGTTCTTAGCCACCGCCTCCCTCCTTTGCTGTGACATCACCACTCTTTCCTGATGCTCAGGAAAGCATATTGCTCCAATTCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249883.10
3UTR-3UTR CCA 90 bp CAGAAAGAACTGGTACCGGGTAGGGCCACCGAAGCCCACCTGGGGGCATGGCAGACTTCAAGAGGCTGGTaGTGGGGGTCCCGTGGGCAT +
Preference number: 2 (lower is better)
Translates to: QKELVPGRATEAHLGAWQTSRGW*WGSRGH
Trigger: ATGCCCACGGGACCCCCACCACCAGCCTCTTGAAGT...CTGCCATGCCCCCAGGTGGGCTTCGGTGGCCCTACCCGGTACCAGTTCTTTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
3UTR-3UTR CCA 90 bp CAGAAAGAACTGGTACCGGGTAGGGCCACCGAAGCCCACCTGGGGGCATGGCAGAGAAGCAGAGTCTTCTaGGGGTGCCGGTGCTCTCAC +
Preference number: 2 (lower is better)
Translates to: QKELVPGRATEAHLGAWQRSRVF*GCRCSH
Trigger: GTGAGAGCACCGGCACCCCCAGAAGACTCTGCTTCT...CTGCCATGCCCCCAGGTGGGCTTCGGTGGCCCTACCCGGTACCAGTTCTTTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
3UTR-3UTR CCA 90 bp TTTAGGGCGCTGGGCATGGGTAGCTTGAGGAGCCAGCCTCCTGGGCACTGTTTTCCACCGAAGCCCACCTaGGGGCATGGCAGATGTCTG +
Preference number: 2 (lower is better)
Translates to: FRALGMGSLRSQPPGHCFPPKPT*GHGRCL
Trigger: CAGACATCTGCCATGCCCCCAGGTGGGCTTCGGTGG...AAAACAGTGCCCAGGAGGCTGGCTCCTCAAGCTACCCATGCCCAGCGCCCTAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
3UTR-3UTR TCA 90 bp AGGCAGCCGAGATCCTGGGAATCGAGCAGCTTTAACATCCACGGGCCAGGAACTCACTCCCTCCCTGCCTaGCTGACAACTGGCAGGGCA +
Preference number: 2 (lower is better)
Translates to: RQPRSWESSSFNIHGPGTHSLPA*LTTGRA
Trigger: TGCCCTGCCAGTTGTCAGTCAGGCAGGGAGGGAGTG...AGTTCCTGGCCCGTGGATGTTAAAGCTGCTCGATTCCCAGGATCTCGGCTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
3UTR-3UTR CCA 90 bp AGGCAGCCGAGATCCTGGGAATCGAGCAGCTTTAACATCCACGGGCCAGGAACTGTGAACCAGTCCACCTaGTGTCCACGGGCAGCCGTC +
Preference number: 2 (lower is better)
Translates to: RQPRSWESSSFNIHGPGTVNQST*CPRAAV
Trigger: GACGGCTGCCCGTGGACACCAGGTGGACTGGTTCAC...AGTTCCTGGCCCGTGGATGTTAAAGCTGCTCGATTCCCAGGATCTCGGCTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
3UTR-3UTR CCA 90 bp CAAAGCATCTGGTGCTGCTTTAGGGCGCTGGGCATGGGTAGCTTGAGGAGCCAGGCCCACCTGGGGGCATaGCAGATGTCTGTTCACGGT +
Preference number: 2 (lower is better)
Translates to: QSIWCCFRALGMGSLRSQAHLGA*QMSVHG
Trigger: ACCGTGAACAGACATCTGCCATGCCCCCAGGTGGGC...CTGGCTCCTCAAGCTACCCATGCCCAGCGCCCTAAAGCAGCACCAGATGCTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
3UTR-3UTR CCA 90 bp GACCAAACTGACAGGATGTTCCAGGGACAGGAGCTGTGGAGCCACTTCAAGAGGGTGAACCAGTCCACCTaGTGTCCACGGGCAGCCGTC +
Preference number: 2 (lower is better)
Translates to: DQTDRMFQGQELWSHFKRVNQST*CPRAAV
Trigger: GACGGCTGCCCGTGGACACCAGGTGGACTGGTTCAC...CCTCTTGAAGTGGCTCCACAGCTCCTGTCCCTGGAACATCCTGTCAGTTTGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
3UTR-3UTR CCA 90 bp AGGCAGCCGAGATCCTGGGAATCGAGCAGCTTTAACATCCACGGGCCAGGAACTGGGGAGCACAGCCCATaGAGACACATCGGAACCTGC +
Preference number: 2 (lower is better)
Translates to: RQPRSWESSSFNIHGPGTGEHSP*RHIGTC
Trigger: GCAGGTTCCGATGTGTCTCCATGGGCTGTGCTCCCC...AGTTCCTGGCCCGTGGATGTTAAAGCTGCTCGATTCCCAGGATCTCGGCTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
3UTR-3UTR CCA 90 bp TTTAGGGCGCTGGGCATGGGTAGCTTGAGGAGCCAGCCTCCTGGGCACTGTTTTCAGGGACAGGAGCTGTaGAGCCACTTCAAGAGGCTG +
Preference number: 2 (lower is better)
Translates to: FRALGMGSLRSQPPGHCFQGQEL*SHFKRL
Trigger: CAGCCTCTTGAAGTGGCTCCACAGCTCCTGTCCCTG...AAAACAGTGCCCAGGAGGCTGGCTCCTCAAGCTACCCATGCCCAGCGCCCTAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
3UTR-3UTR TCA 90 bp GGAGACACATCGGAACCTGCAGGCCTCAGTCTTCTGTTCCACAAGAAAGGGAATCCCTCCCTGCCTGACTaGCAACTGGCAGGGCAGAGG +
Preference number: 2 (lower is better)
Translates to: GDTSEPAGLSLLFHKKGNPSLPD*QLAGQR
Trigger: CCTCTGCCCTGCCAGTTGTCAGTCAGGCAGGGAGGG...ATTCCCTTTCTTGTGGAACAGAAGACTGAGGCCTGCAGGTTCCGATGTGTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
3UTR-3UTR GCA 90 bp GGGGTCCCGTGGGCATTTATAGGGCTCAAGATAGAGGAAAAGGCAGCCGAGATCTTCTGGGGGTGCCGGTaGTCTCACAGCTCTCCTCTC +
Preference number: 2 (lower is better)
Translates to: GVPWAFIGLKIEEKAAEIFWGCR*SHSSPL
Trigger: GAGAGGAGAGCTGTGAGAGCACCGGCACCCCCAGAA...GATCTCGGCTGCCTTTTCCTCTATCTTGAGCCCTATAAATGCCCACGGGACCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
3UTR-3UTR GCA 90 bp CAAGAGGCTGGTGGTGGGGGTCCCGTGGGCATTTATAGGGCTCAAGATAGAGGAAGAGTCTTCTGGGGGTaGCGGTGCTCTCACAGCTCT +
Preference number: 2 (lower is better)
Translates to: QEAGGGGPVGIYRAQDRGRVFWG*RCSHSS
Trigger: AGAGCTGTGAGAGCACCGGCACCCCCAGAAGACTCT...TCCTCTATCTTGAGCCCTATAAATGCCCACGGGACCCCCACCACCAGCCTCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
3UTR-3UTR CCA 90 bp ACAAGACATCTCCAGTTTCTCAGAAAGAACTGGTACCGGGTAGGGCCACCGAAGGCCACTTCAAGAGGCTaGTGGTGGGGGTCCCGTGGG +
Preference number: 2 (lower is better)
Translates to: TRHLQFLRKNWYRVGPPKATSRG*WWGSRG
Trigger: CCCACGGGACCCCCACCACCAGCCTCTTGAAGTGGC...CTTCGGTGGCCCTACCCGGTACCAGTTCTTTCTGAGAAACTGGAGATGTCTTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
3UTR-3UTR CCA 90 bp AGGCAGCCGAGATCCTGGGAATCGAGCAGCTTTAACATCCACGGGCCAGGAACTATGGGAATGAGTGTCTaGCTGGGGAAAGGGACGGAG +
Preference number: 2 (lower is better)
Translates to: RQPRSWESSSFNIHGPGTMGMSV*LGKGTE
Trigger: CTCCGTCCCTTTCCCCAGCCAGACACTCATTCCCAT...AGTTCCTGGCCCGTGGATGTTAAAGCTGCTCGATTCCCAGGATCTCGGCTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
3UTR-3UTR CCA 90 bp CAAAGCATCTGGTGCTGCTTTAGGGCGCTGGGCATGGGTAGCTTGAGGAGCCAGAGGCCCGGAGGAATGTaGGCTAAGAAGCAGAGTCTT +
Preference number: 2 (lower is better)
Translates to: QSIWCCFRALGMGSLRSQRPGGM*AKKQSL
Trigger: AAGACTCTGCTTCTTAGCCCACATTCCTCCGGGCCT...CTGGCTCCTCAAGCTACCCATGCCCAGCGCCCTAAAGCAGCACCAGATGCTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
3UTR-3UTR CCA 90 bp GGGGTCCCGTGGGCATTTATAGGGCTCAAGATAGAGGAAAAGGCAGCCGAGATCATGGGAATGAGTGTCTaGCTGGGGAAAGGGACGGAG +
Preference number: 2 (lower is better)
Translates to: GVPWAFIGLKIEEKAAEIMGMSV*LGKGTE
Trigger: CTCCGTCCCTTTCCCCAGCCAGACACTCATTCCCAT...GATCTCGGCTGCCTTTTCCTCTATCTTGAGCCCTATAAATGCCCACGGGACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
3UTR-3UTR CCA 90 bp AGGCAGCCGAGATCCTGGGAATCGAGCAGCTTTAACATCCACGGGCCAGGAACTGCTCCTGGGACCAGATaGTCAATGGGAATGAGTGTC +
Preference number: 2 (lower is better)
Translates to: RQPRSWESSSFNIHGPGTAPGTR*SMGMSV
Trigger: GACACTCATTCCCATTGACCATCTGGTCCCAGGAGC...AGTTCCTGGCCCGTGGATGTTAAAGCTGCTCGATTCCCAGGATCTCGGCTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
3UTR-3UTR CCA 90 bp CAAGAGGCTGGTGGTGGGGGTCCCGTGGGCATTTATAGGGCTCAAGATAGAGGAGCTCCTGGGACCAGATaGTCAATGGGAATGAGTGTC +
Preference number: 2 (lower is better)
Translates to: QEAGGGGPVGIYRAQDRGAPGTR*SMGMSV
Trigger: GACACTCATTCCCATTGACCATCTGGTCCCAGGAGC...TCCTCTATCTTGAGCCCTATAAATGCCCACGGGACCCCCACCACCAGCCTCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
3UTR-3UTR CCA 90 bp GACCAAACTGACAGGATGTTCCAGGGACAGGAGCTGTGGAGCCACTTCAAGAGGACGGGCAGCCGTCCGTaGAAATTAGTTCCCCAAACC +
Preference number: 2 (lower is better)
Translates to: DQTDRMFQGQELWSHFKRTGSRP*KLVPQT
Trigger: GGTTTGGGGAACTAATTTCCACGGACGGCTGCCCGT...CCTCTTGAAGTGGCTCCACAGCTCCTGTCCCTGGAACATCCTGTCAGTTTGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
3UTR-3UTR CCA 90 bp CTGGCCTTCTGGATGGTTTCGGACAAAACTTTATGTGCTAGGTGGGAGTGGGAAGTGAACCAGTCCACCTaGTGTCCACGGGCAGCCGTC +
Preference number: 2 (lower is better)
Translates to: LAFWMVSDKTLCARWEWEVNQST*CPRAAV
Trigger: GACGGCTGCCCGTGGACACCAGGTGGACTGGTTCAC...TTCCCACTCCCACCTAGCACATAAAGTTTTGTCCGAAACCATCCAGAAGGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249883.10
3UTR-3UTR TCA 90 bp GGGGTCCCGTGGGCATTTATAGGGCTCAAGATAGAGGAAAAGGCAGCCGAGATCGATGGTCAATGGGAATaGGTGTCTGGCTGGGGAAAG +
Preference number: 2 (lower is better)
Translates to: GVPWAFIGLKIEEKAAEIDGQWE*VSGWGK
Trigger: CTTTCCCCAGCCAGACACTCATTCCCATTGACCATC...GATCTCGGCTGCCTTTTCCTCTATCTTGAGCCCTATAAATGCCCACGGGACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
3UTR-3UTR CCA 90 bp CAGCCTCCTGGGCACTGTTTTGTGATGGGGGCTCCATTCAGAGGACTATTTGACACGGGCAGCCGTCCGTaGAAATTAGTTCCCCAAACC +
Preference number: 2 (lower is better)
Translates to: QPPGHCFVMGAPFRGLFDTGSRP*KLVPQT
Trigger: GGTTTGGGGAACTAATTTCCACGGACGGCTGCCCGT...GTCAAATAGTCCTCTGAATGGAGCCCCCATCACAAAACAGTGCCCAGGAGGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
3UTR-3UTR CCA 90 bp ACAAGACATCTCCAGTTTCTCAGAAAGAACTGGTACCGGGTAGGGCCACCGAAGCAGGGACAGGAGCTGTaGAGCCACTTCAAGAGGCTG +
Preference number: 2 (lower is better)
Translates to: TRHLQFLRKNWYRVGPPKQGQEL*SHFKRL
Trigger: CAGCCTCTTGAAGTGGCTCCACAGCTCCTGTCCCTG...CTTCGGTGGCCCTACCCGGTACCAGTTCTTTCTGAGAAACTGGAGATGTCTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
3UTR CAA 90 bp TGTCACAGCAAAGGAGGGAGGCGGTGGCTAAGAACATGCACATTCTaGAATGTCCTCTGCATGGTGCCTGGCCTTCTGGATGGTTTCGGA +
Preference number: 2 (lower is better)
Translates to: CHSKGGRRWLRTCTF*NVLCMVPGLLDGFG
Trigger: TCCGAAACCATCCAGAAGGCCAGGCACCATGCAGAGGACATTCAAGAATGTGCATGTTCTTAGCCACCGCCTCCCTCCTTTGCTGTGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249883.10
3UTR-3UTR TCA 90 bp CTCCAGGTGGGAATGAAGACACTTATGCTAACAAGACATCTCCAGTTTCTCAGACCCTCCCTGCCTGACTaGCAACTGGCAGGGCAGAGG +
Preference number: 2 (lower is better)
Translates to: LQVGMKTLMLTRHLQFLRPSLPD*QLAGQR
Trigger: CCTCTGCCCTGCCAGTTGTCAGTCAGGCAGGGAGGG...TCTGAGAAACTGGAGATGTCTTGTTAGCATAAGTGTCTTCATTCCCACCTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
3UTR-3UTR GCA 90 bp AAATACTGTTATACCCAGTGGAATGCGGCAGCAATCCTGGTACAGGGTGGCATATTCTGGGGGTGCCGGTaGTCTCACAGCTCTCCTCTC +
Preference number: 2 (lower is better)
Translates to: KYCYTQWNAAAILVQGGIFWGCR*SHSSPL
Trigger: GAGAGGAGAGCTGTGAGAGCACCGGCACCCCCAGAA...TATGCCACCCTGTACCAGGATTGCTGCCGCATTCCACTGGGTATAACAGTATTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
3UTR-3UTR CCA 90 bp GGAGACACATCGGAACCTGCAGGCCTCAGTCTTCTGTTCCACAAGAAAGGGAATATGGGAATGAGTGTCTaGCTGGGGAAAGGGACGGAG +
Preference number: 2 (lower is better)
Translates to: GDTSEPAGLSLLFHKKGNMGMSV*LGKGTE
Trigger: CTCCGTCCCTTTCCCCAGCCAGACACTCATTCCCAT...ATTCCCTTTCTTGTGGAACAGAAGACTGAGGCCTGCAGGTTCCGATGTGTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
3UTR-3UTR TCA 90 bp ACAAGACATCTCCAGTTTCTCAGAAAGAACTGGTACCGGGTAGGGCCACCGAAGAAGGCAGTGAGGAACTaGAGAGCAGATGACGTTGGC +
Preference number: 2 (lower is better)
Translates to: TRHLQFLRKNWYRVGPPKKAVRN*RADDVG
Trigger: GCCAACGTCATCTGCTCTTCAGTTCCTCACTGCCTT...CTTCGGTGGCCCTACCCGGTACCAGTTCTTTCTGAGAAACTGGAGATGTCTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
3UTR-3UTR TCA 90 bp CAGCCTCCTGGGCACTGTTTTGTGATGGGGGCTCCATTCAGAGGACTATTTGACATCCCAAGAAGGCAGTaGGGAACTGAAGAGCAGATG +
Preference number: 2 (lower is better)
Translates to: QPPGHCFVMGAPFRGLFDIPRRQ*GTEEQM
Trigger: CATCTGCTCTTCAGTTCCTCACTGCCTTCTTGGGAT...GTCAAATAGTCCTCTGAATGGAGCCCCCATCACAAAACAGTGCCCAGGAGGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
3UTR-3UTR CCA 90 bp GAGAACAATATGGCTGACTTGATTAGTGAACCAGTCCACCTGGTGTCCACGGGCAGGCCCGGAGGAATGTaGGCTAAGAAGCAGAGTCTT +
Preference number: 2 (lower is better)
Translates to: ENNMADLISEPVHLVSTGRPGGM*AKKQSL
Trigger: AAGACTCTGCTTCTTAGCCCACATTCCTCCGGGCCT...GCCCGTGGACACCAGGTGGACTGGTTCACTAATCAAGTCAGCCATATTGTTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
3UTR-3UTR CCA 90 bp TTTGCTCCTCTCCCAAACCCTCCAGGTGGGAATGAAGACACTTATGCTAACAAGTGCCTGACTGACAACTaGCAGGGCAGAGGGAGCTCA +
Preference number: 2 (lower is better)
Translates to: FAPLPNPPGGNEDTYANKCLTDN*QGRGSS
Trigger: TGAGCTCCCTCTGCCCTGCCAGTTGTCAGTCAGGCA...CTTGTTAGCATAAGTGTCTTCATTCCCACCTGGAGGGTTTGGGAGAGGAGCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
3UTR-3UTR CCA 90 bp ATGAAAGGGGAAAAATGCCAGCCACATCCTCATTCCAACTCTATCCTTAATGCAGCCACTTCAAGAGGCTaGTGGTGGGGGTCCCGTGGG +
Preference number: 2 (lower is better)
Translates to: MKGEKCQPHPHSNSILNAATSRG*WWGSRG
Trigger: CCCACGGGACCCCCACCACCAGCCTCTTGAAGTGGC...TGCATTAAGGATAGAGTTGGAATGAGGATGTGGCTGGCATTTTTCCCCTTTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000249883.10
3UTR-3UTR CCA 90 bp AAATACTGTTATACCCAGTGGAATGCGGCAGCAATCCTGGTACAGGGTGGCATACAGGGACAGGAGCTGTaGAGCCACTTCAAGAGGCTG +
Preference number: 2 (lower is better)
Translates to: KYCYTQWNAAAILVQGGIQGQEL*SHFKRL
Trigger: CAGCCTCTTGAAGTGGCTCCACAGCTCCTGTCCCTG...TATGCCACCCTGTACCAGGATTGCTGCCGCATTCCACTGGGTATAACAGTATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
3UTR-3UTR TCA 90 bp GACCAAACTGACAGGATGTTCCAGGGACAGGAGCTGTGGAGCCACTTCAAGAGGACAATATGGCTGACTTaGTTAGTGAACCAGTCCACC +
Preference number: 2 (lower is better)
Translates to: DQTDRMFQGQELWSHFKRTIWLT*LVNQST
Trigger: GGTGGACTGGTTCACTAATCAAGTCAGCCATATTGT...CCTCTTGAAGTGGCTCCACAGCTCCTGTCCCTGGAACATCCTGTCAGTTTGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
3UTR-3UTR TCA 90 bp CTCCAGGTGGGAATGAAGACACTTATGCTAACAAGACATCTCCAGTTTCTCAGACACGGGCCAGGAACTTaGGGAGGAGGCATAACTGGG +
Preference number: 2 (lower is better)
Translates to: LQVGMKTLMLTRHLQFLRHGPGT*GGGITG
Trigger: CCCAGTTATGCCTCCTCCTCAAGTTCCTGGCCCGTG...TCTGAGAAACTGGAGATGTCTTGTTAGCATAAGTGTCTTCATTCCCACCTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
3UTR-3UTR TCA 90 bp GGCATTTATAGGGCTCAAGATAGAGGAAAAGGCAGCCGAGATCCTGGGAATCGAGAACTGAAGAGCAGATaGCGTTGGCTGGAACCAAAC +
Preference number: 2 (lower is better)
Translates to: GIYRAQDRGKGSRDPGNRELKSR*RWLEPN
Trigger: GTTTGGTTCCAGCCAACGTCATCTGCTCTTCAGTTC...TCGATTCCCAGGATCTCGGCTGCCTTTTCCTCTATCTTGAGCCCTATAAATGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
3UTR-3UTR TCA 90 bp AAATACTGTTATACCCAGTGGAATGCGGCAGCAATCCTGGTACAGGGTGGCATAAAGGCAGTGAGGAACTaGAGAGCAGATGACGTTGGC +
Preference number: 2 (lower is better)
Translates to: KYCYTQWNAAAILVQGGIKAVRN*RADDVG
Trigger: GCCAACGTCATCTGCTCTTCAGTTCCTCACTGCCTT...TATGCCACCCTGTACCAGGATTGCTGCCGCATTCCACTGGGTATAACAGTATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
3UTR-3UTR CCA 90 bp TTTGCTCCTCTCCCAAACCCTCCAGGTGGGAATGAAGACACTTATGCTAACAAGAGGCAGCCGAGATCCTaGGAATCGAGCAGCTTTAAC +
Preference number: 2 (lower is better)
Translates to: FAPLPNPPGGNEDTYANKRQPRS*ESSSFN
Trigger: GTTAAAGCTGCTCGATTCCCAGGATCTCGGCTGCCT...CTTGTTAGCATAAGTGTCTTCATTCCCACCTGGAGGGTTTGGGAGAGGAGCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
3UTR-3UTR GCA 90 bp TTTGCTCCTCTCCCAAACCCTCCAGGTGGGAATGAAGACACTTATGCTAACAAGAGACACATCGGAACCTaGAGGCCTCAGTCTTCTGTT +
Preference number: 2 (lower is better)
Translates to: FAPLPNPPGGNEDTYANKRHIGT*RPQSSV
Trigger: AACAGAAGACTGAGGCCTGCAGGTTCCGATGTGTCT...CTTGTTAGCATAAGTGTCTTCATTCCCACCTGGAGGGTTTGGGAGAGGAGCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
3UTR-3UTR CCA 90 bp AAATACTGTTATACCCAGTGGAATGCGGCAGCAATCCTGGTACAGGGTGGCATAAGGAGGAGGCATAACTaGGAGGCCAGTCAGAAGTTT +
Preference number: 2 (lower is better)
Translates to: KYCYTQWNAAAILVQGGIRRRHN*EASQKF
Trigger: AAACTTCTGACTGGCCTCCCAGTTATGCCTCCTCCT...TATGCCACCCTGTACCAGGATTGCTGCCGCATTCCACTGGGTATAACAGTATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
3UTR-3UTR TCA 90 bp ATGAAAGGGGAAAAATGCCAGCCACATCCTCATTCCAACTCTATCCTTAATGCAAATAGCTCCTGGGGCTaGAGTGAGGGACTCTTTAAG +
Preference number: 2 (lower is better)
Translates to: MKGEKCQPHPHSNSILNANSSWG*SEGLFK
Trigger: CTTAAAGAGTCCCTCACTTCAGCCCCAGGAGCTATT...TGCATTAAGGATAGAGTTGGAATGAGGATGTGGCTGGCATTTTTCCCCTTTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000249883.10
3UTR-3UTR GCA 90 bp CTGGCCTTCTGGATGGTTTCGGACAAAACTTTATGTGCTAGGTGGGAGTGGGAAGCAAAGTCTCACCTGTaGAAAGACATCACTTTTAAT +
Preference number: 2 (lower is better)
Translates to: LAFWMVSDKTLCARWEWEAKSHL*KDITFN
Trigger: ATTAAAAGTGATGTCTTTGCACAGGTGAGACTTTGC...TTCCCACTCCCACCTAGCACATAAAGTTTTGTCCGAAACCATCCAGAAGGCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249883.10
3UTR-3UTR CCA 90 bp ATGAAAGGGGAAAAATGCCAGCCACATCCTCATTCCAACTCTATCCTTAATGCAAATCCTGGTACAGGGTaGCATAACAAAACAGCCATG +
Preference number: 2 (lower is better)
Translates to: MKGEKCQPHPHSNSILNANPGTG*HNKTAM
Trigger: CATGGCTGTTTTGTTATGCCACCCTGTACCAGGATT...TGCATTAAGGATAGAGTTGGAATGAGGATGTGGCTGGCATTTTTCCCCTTTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000249883.10
3UTR CCA 72 bp GGCCCGGAGGAATGTGGGCTAAGAAGCAGAGTCTTCTaGGGGTGCCGGTGCTCTCACAGCTCTCCTCTCCCC +
Preference number: 3 (lower is better)
Translates to: GPEECGLRSRVF*GCRCSHSSPLP
Trigger: GGGGAGAGGAGAGCTGTGAGAGCACCGGCACCCCCAGAAGACTCTGCTTCTTAGCCCACATTCCTCCGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
3UTR CCA 72 bp AAGAACTGGTACCGGGTAGGGCCACCGAAGCCCACCTaGGGGCATGGCAGATGTCTGTTCACGGTGGCTCAT +
Preference number: 3 (lower is better)
Translates to: KNWYRVGPPKPT*GHGRCLFTVAH
Trigger: ATGAGCCACCGTGAACAGACATCTGCCATGCCCCCAGGTGGGCTTCGGTGGCCCTACCCGGTACCAGTTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
3UTR TCA 72 bp GACAACTGGCAGGGCAGAGGGAGCTCAGCTCCTTTCTaGGCTGTCAGTTGCTACCCCAGTAGCAGGCCTTGG +
Preference number: 3 (lower is better)
Translates to: DNWQGRGSSAPF*AVSCYPSSRPW
Trigger: CCAAGGCCTGCTACTGGGGTAGCAACTGACAGCTCAGAAAGGAGCTGAGCTCCCTCTGCCCTGCCAGTTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
3UTR CCA 72 bp GAACCAGTCCACCTGGTGTCCACGGGCAGCCGTCCGTaGAAATTAGTTCCCCAAACCAACACAGCCACTCCC +
Preference number: 3 (lower is better)
Translates to: EPVHLVSTGSRP*KLVPQTNTATP
Trigger: GGGAGTGGCTGTGTTGGTTTGGGGAACTAATTTCCACGGACGGCTGCCCGTGGACACCAGGTGGACTGGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
3UTR-3UTR CAA 90 bp CTGGCCTTCTGGATGGTTTCGGACAAAACTTTATGTGCTAGGTGGGAGTGGGAAGGGACGGAGCAGCGGTaGACGGGGCTGCTGAAATGG +
Preference number: 3 (lower is better)
Translates to: LAFWMVSDKTLCARWEWEGTEQR*TGLLKW
Trigger: CCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCC...TTCCCACTCCCACCTAGCACATAAAGTTTTGTCCGAAACCATCCAGAAGGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249883.10
3UTR-3UTR CAA 90 bp CCTGGGCACTGTTTTGTGATGGGGGCTCCATTCAGAGGACTATTTGACTCTTGTGGGACGGAGCAGCGGTaGACGGGGCTGCTGAAATGG +
Preference number: 3 (lower is better)
Translates to: PGHCFVMGAPFRGLFDSCGTEQR*TGLLKW
Trigger: CCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCC...ACAAGAGTCAAATAGTCCTCTGAATGGAGCCCCCATCACAAAACAGTGCCCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
3UTR GCA 72 bp GTGGGTGTTTCACCCCAATTCCAAAGCATCTGGTGCTaGTTTAGGGCGCTGGGCATGGGTAGCTTGAGGAGC +
Preference number: 3 (lower is better)
Translates to: VGVSPQFQSIWC*FRALGMGSLRS
Trigger: GCTCCTCAAGCTACCCATGCCCAGCGCCCTAAAGCAGCACCAGATGCTTTGGAATTGGGGTGAAACACCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
3UTR-3UTR CAA 90 bp CAAAGCATCTGGTGCTGCTTTAGGGCGCTGGGCATGGGTAGCTTGAGGAGCCAGGAAGAGCAGATGACGTaGGCTGGAACCAAACTTAGC +
Preference number: 3 (lower is better)
Translates to: QSIWCCFRALGMGSLRSQEEQMT*AGTKLS
Trigger: GCTAAGTTTGGTTCCAGCCAACGTCATCTGCTCTTC...CTGGCTCCTCAAGCTACCCATGCCCAGCGCCCTAAAGCAGCACCAGATGCTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
3UTR GCA 72 bp CATGTGGGTGTTTCACCCCAATTCCAAAGCATCTGGTaGTGCTTTAGGGCGCTGGGCATGGGTAGCTTGAGG +
Preference number: 3 (lower is better)
Translates to: HVGVSPQFQSIW*CFRALGMGSLR
Trigger: CCTCAAGCTACCCATGCCCAGCGCCCTAAAGCAGCACCAGATGCTTTGGAATTGGGGTGAAACACCCACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
3UTR TCA 72 bp GAATCGAGCAGCTTTAACATCCACGGGCCAGGAACTTaGGGAGGAGGCATAACTGGGAGGCCAGTCAGAAGT +
Preference number: 3 (lower is better)
Translates to: ESSSFNIHGPGT*GGGITGRPVRS
Trigger: ACTTCTGACTGGCCTCCCAGTTATGCCTCCTCCTCAAGTTCCTGGCCCGTGGATGTTAAAGCTGCTCGATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
3UTR GCA 72 bp TGTCACAGCAAAGGAGGGAGGCGGTGGCTAAGAACATaGACATTCTTGAATGTCCTCTGCATGGTGCCTGGC +
Preference number: 3 (lower is better)
Translates to: CHSKGGRRWLRT*TFLNVLCMVPG
Trigger: GCCAGGCACCATGCAGAGGACATTCAAGAATGTGCATGTTCTTAGCCACCGCCTCCCTCCTTTGCTGTGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249883.10
3UTR CCA 72 bp CATCCACGGGCCAGGAACTTGAGGAGGAGGCATAACTaGGAGGCCAGTCAGAAGTTTCAGAAACTGACAGTA +
Preference number: 3 (lower is better)
Translates to: HPRARNLRRRHN*EASQKFQKLTV
Trigger: TACTGTCAGTTTCTGAAACTTCTGACTGGCCTCCCAGTTATGCCTCCTCCTCAAGTTCCTGGCCCGTGGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
3UTR-3UTR CAA 90 bp CAAGAGGCTGGTGGTGGGGGTCCCGTGGGCATTTATAGGGCTCAAGATAGAGGAAACAATATGGCTGACTaGATTAGTGAACCAGTCCAC +
Preference number: 3 (lower is better)
Translates to: QEAGGGGPVGIYRAQDRGNNMAD*ISEPVH
Trigger: GTGGACTGGTTCACTAATCAAGTCAGCCATATTGTT...TCCTCTATCTTGAGCCCTATAAATGCCCACGGGACCCCCACCACCAGCCTCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
3UTR TCA 72 bp GAGCAATATGCTTTCCTGAGCATCAGGAAAGAGTGGTaGTGTCACAGCAAAGGAGGGAGGCGGTGGCTAAGA +
Preference number: 3 (lower is better)
Translates to: EQYAFLSIRKEW*CHSKGGRRWLR
Trigger: TCTTAGCCACCGCCTCCCTCCTTTGCTGTGACATCACCACTCTTTCCTGATGCTCAGGAAAGCATATTGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249883.10
3UTR GCA 72 bp CGGTGGCTAAGAACATGCACATTCTTGAATGTCCTCTaGATGGTGCCTGGCCTTCTGGATGGTTTCGGACAA +
Preference number: 3 (lower is better)
Translates to: RWLRTCTFLNVL*MVPGLLDGFGQ
Trigger: TTGTCCGAAACCATCCAGAAGGCCAGGCACCATGCAGAGGACATTCAAGAATGTGCATGTTCTTAGCCACCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249883.10
3UTR TCA 72 bp GGAACCAAACTTAGCCAGAGAACAATATGGCTGACTTaGTTAGTGAACCAGTCCACCTGGTGTCCACGGGCA +
Preference number: 3 (lower is better)
Translates to: GTKLSQRTIWLT*LVNQSTWCPRA
Trigger: TGCCCGTGGACACCAGGTGGACTGGTTCACTAATCAAGTCAGCCATATTGTTCTCTGGCTAAGTTTGGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
3UTR CCA 72 bp AAGGATAAAGCCATCTTTGGACACCCACTCCCACTGTaGATAACCACAGCGTGTGGCCGAACAAAGCTGATT +
Preference number: 3 (lower is better)
Translates to: KDKAIFGHPLPL*ITTACGRTKLI
Trigger: AATCAGCTTTGTTCGGCCACACGCTGTGGTTATCCACAGTGGGAGTGGGTGTCCAAAGATGGCTTTATCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249883.10
3UTR-3UTR CAA 90 bp AAATACTGTTATACCCAGTGGAATGCGGCAGCAATCCTGGTACAGGGTGGCATAGAAGAGCAGATGACGTaGGCTGGAACCAAACTTAGC +
Preference number: 3 (lower is better)
Translates to: KYCYTQWNAAAILVQGGIEEQMT*AGTKLS
Trigger: GCTAAGTTTGGTTCCAGCCAACGTCATCTGCTCTTC...TATGCCACCCTGTACCAGGATTGCTGCCGCATTCCACTGGGTATAACAGTATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
3UTR-3UTR CAA 90 bp CCTCCTGGGCACTGTTTTGTGATGGGGGCTCCATTCAGAGGACTATTTGACTCTAACAATATGGCTGACTaGATTAGTGAACCAGTCCAC +
Preference number: 3 (lower is better)
Translates to: PPGHCFVMGAPFRGLFDSNNMAD*ISEPVH
Trigger: GTGGACTGGTTCACTAATCAAGTCAGCCATATTGTT...AGAGTCAAATAGTCCTCTGAATGGAGCCCCCATCACAAAACAGTGCCCAGGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
3UTR-3UTR CAA 90 bp TTTGCTCCTCTCCCAAACCCTCCAGGTGGGAATGAAGACACTTATGCTAACAAGAACAATATGGCTGACTaGATTAGTGAACCAGTCCAC +
Preference number: 3 (lower is better)
Translates to: FAPLPNPPGGNEDTYANKNNMAD*ISEPVH
Trigger: GTGGACTGGTTCACTAATCAAGTCAGCCATATTGTT...CTTGTTAGCATAAGTGTCTTCATTCCCACCTGGAGGGTTTGGGAGAGGAGCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
3UTR GCA 72 bp TCTTCTGTTCCACAAGAAAGGGAATTATATACAAACTaGGCACTGTCTCCCAGTCCACTTAAATGGCCCCTC +
Preference number: 3 (lower is better)
Translates to: SSVPQERELYTN*ALSPSPLKWPL
Trigger: GAGGGGCCATTTAAGTGGACTGGGAGACAGTGCGCAGTTTGTATATAATTCCCTTTCTTGTGGAACAGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
3UTR CCA 72 bp AACATGCACATTCTTGAATGTCCTCTGCATGGTGCCTaGCCTTCTGGATGGTTTCGGACAAAACTTTATGTG +
Preference number: 3 (lower is better)
Translates to: NMHILECPLHGA*PSGWFRTKLYV
Trigger: CACATAAAGTTTTGTCCGAAACCATCCAGAAGGCCAGGCACCATGCAGAGGACATTCAAGAATGTGCATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249883.10
CDS-3UTR GCA 90 bp GCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGAGGAGGGAGCGCACGTGCCCATaGCTCAGCTCCCGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: AAVDGAAEMAESGTGQRRERTCP*LSSRRA
Trigger: GGCCCTGCGGGAGCTGAGGCATGGGCACGTGCGCTC...CCTCCTCTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp GGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGAGGGCTGGAAGTGCGGGCTaGCGCGGGCACGGTACCGTG +
Preference number: 4 (lower is better)
Translates to: GAAVDGAAEMAESGTGQRAGSAG*RGHGTV
Trigger: CACGGTACCGTGCCCGCGGCAGCCCGCACTTCCAGC...CCTCTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp GCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGAGGAGGCGAGCTGCCCGGCCCTaGGCATTGCCCAGAGCCTGC +
Preference number: 4 (lower is better)
Translates to: AAVDGAAEMAESGTGQRRRAARP*ALPRAC
Trigger: GCAGGCTCTGGGCAATGCGCAGGGCCGGGCAGCTCG...CCTCCTCTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp GGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGAGGCGAGCTGCCCGGCCCTaGGCATTGCCCAGAGCCTGC +
Preference number: 4 (lower is better)
Translates to: GAAVDGAAEMAESGTGQRRAARP*ALPRAC
Trigger: GCAGGCTCTGGGCAATGCGCAGGGCCGGGCAGCTCG...CCTCTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CCA 90 bp CAGAAAGAACTGGTACCGGGTAGGGCCACCGAAGCCCACCTGGGGGCATGGCAGAGGAGCTCATGTGGCTaGGGGCCCGGGCGCCGTTCC +
Preference number: 4 (lower is better)
Translates to: QKELVPGRATEAHLGAWQRSSCG*GPGRRS
Trigger: GGAACGGCGCCCGGGCCCCCAGCCACATGAGCTCCT...CTGCCATGCCCCCAGGTGGGCTTCGGTGGCCCTACCCGGTACCAGTTCTTTCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp GAGTGTCTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGTGGGAGGAGCTCATGTaGCTGGGGGCCCGGGCGCCG +
Preference number: 4 (lower is better)
Translates to: ECLAGERDGAAVDGAAEMWEELM*LGARAP
Trigger: CGGCGCCCGGGCCCCCAGCCACATGAGCTCCTCCCA...CATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAGACACTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CCA 90 bp GCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGAGGAGGGGGCACTGCCCGAGGTaGCTGAGGAGGCCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: AAVDGAAEMAESGTGQRRGHCPR*LRRPGH
Trigger: GTGCCCAGGCCTCCTCAGCCACCTCGGGCAGTGCCC...CCTCCTCTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp TGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGCTGCGGCCCGAGGGTaGCCAGCGCAGTCAGACACC +
Preference number: 4 (lower is better)
Translates to: WLGKGTEQRLTGLLKWLRAAARG*PAQSDT
Trigger: GGTGTCTGACTGCGCTGGGCACCCTCGGGCCGCAGC...TCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
CDS-3UTR GCA 90 bp TGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGATGGCCCTGGGGCTCCTaGCTGGTGGCCTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: WLGKGTEQRLTGLLKWLRWPWGS*LVACCS
Trigger: GCTGCAGCAGGCCACCAGGCAGGAGCCCCAGGGCCA...TCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp CTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGTTCTCACCGCCCTGGTaGTCCTGGCCCTGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: LAGERDGAAVDGAAEMAEFSPPW*SWPWGS
Trigger: GGAGCCCCAGGGCCAGGAGCACCAGGGCGGTGAGAA...CTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp GACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGTTCTCACCGCCCTGGTaGTCCTGGCCCTGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: DGAAVDGAAEMAESGTGQFSPPW*SWPWGS
Trigger: GGAGCCCCAGGGCCAGGAGCACCAGGGCGGTGAGAA...CTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp AGTGTCTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGGCTGGAAGTGCGGGCTaGCGCGGGCACGGTACCGTG +
Preference number: 4 (lower is better)
Translates to: SVWLGKGTEQRLTGLLKWAGSAG*RGHGTV
Trigger: CACGGTACCGTGCCCGCGGCAGCCCGCACTTCCAGC...CCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAGACACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp GACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGTCAGCATGCTGGAAGTaGGGGCTGCCGCGGGCACGG +
Preference number: 4 (lower is better)
Translates to: DGAAVDGAAEMAESGTGQSACWK*GLPRAR
Trigger: CCGTGCCCGCGGCAGCCCGCACTTCCAGCATGCTGA...CTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp TGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGGGCCAGGTGGGCACTaGCCGAGGTGGCTGAGGAGG +
Preference number: 4 (lower is better)
Translates to: WLGKGTEQRLTGLLKWLRGPGGH*PRWLRR
Trigger: CCTCCTCAGCCACCTCGGGCAGTGCCCACCTGGCCC...TCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp TGTCTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGGGCCAGGTGGGCACTaGCCGAGGTGGCTGAGGAGG +
Preference number: 4 (lower is better)
Translates to: CLAGERDGAAVDGAAEMAGPGGH*PRWLRR
Trigger: CCTCCTCAGCCACCTCGGGCAGTGCCCACCTGGCCC...AGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAGACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp GGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCCCCGGCCCTGCGCATTaGCCAGAGCCTGCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: GERDGAAVDGAAEMAESGPGPAH*PEPAPA
Trigger: TGCTGGAGCAGGCTCTGGGCAATGCGCAGGGCCGGG...GCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp GACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGCCCGGCCCTGCGCATTaGCCAGAGCCTGCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: DGAAVDGAAEMAESGTGQPGPAH*PEPAPA
Trigger: TGCTGGAGCAGGCTCTGGGCAATGCGCAGGGCCGGG...CTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp GGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGAGGCTCTTCGGCTCGAGCTaGCCGGCCCTGCGCATTGCC +
Preference number: 4 (lower is better)
Translates to: GAAVDGAAEMAESGTGQRLFGSS*PALRIA
Trigger: GGCAATGCGCAGGGCCGGGCAGCTCGAGCCGAAGAG...CCTCTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp GGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCCTCTTCGGCTCGAGCTaGCCGGCCCTGCGCATTGCC +
Preference number: 4 (lower is better)
Translates to: GERDGAAVDGAAEMAESGLFGSS*PALRIA
Trigger: GGCAATGCGCAGGGCCGGGCAGCTCGAGCCGAAGAG...GCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp GGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCCCGCTTCTCACAGGCTaGCTGCAGCTGCCCGAGCGC +
Preference number: 4 (lower is better)
Translates to: GERDGAAVDGAAEMAESGPLLTG*LQLPER
Trigger: GCGCTCGGGCAGCTGCAGGCAGCCTGTGAGAAGCGG...GCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CCA 90 bp CTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGTGGTTCTCACCGCCCTaGTGCTCCTGGCCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: LAGERDGAAVDGAAEMAEWFSPP*CSWPWG
Trigger: GCCCCAGGGCCAGGAGCACCAGGGCGGTGAGAACCA...CTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CCA 90 bp AGTGTCTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGTCGGTCCCCCGCATGTaGCCGGGTCCCTGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: SVWLGKGTEQRLTGLLKWSVPRM*PGPCLL
Trigger: CAGCAGGCAGGGACCCGGCCACATGCGGGGGACCGA...CCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAGACACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CCA 90 bp CTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGTCGGTCCCCCGCATGTaGCCGGGTCCCTGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: LGKGTEQRLTGLLKWLRVSVPRM*PGPCLL
Trigger: CAGCAGGCAGGGACCCGGCCACATGCGGGGGACCGA...CACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CCA 90 bp TGTCTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTTCGGTCCCCCGCATGTaGCCGGGTCCCTGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: CLAGERDGAAVDGAAEMASVPRM*PGPCLL
Trigger: CAGCAGGCAGGGACCCGGCCACATGCGGGGGACCGA...AGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAGACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CCA 90 bp TGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAAGGAGCTCATGTGGCTaGGGGCCCGGGCGCCGTTCC +
Preference number: 4 (lower is better)
Translates to: WLGKGTEQRLTGLLKWLRRSSCG*GPGRRS
Trigger: GGAACGGCGCCCGGGCCCCCAGCCACATGAGCTCCT...TCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CCA 90 bp GAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGAGGAAGGAGCTCATGTGGCTaGGGGCCCGGGCGCCGTTCC +
Preference number: 4 (lower is better)
Translates to: EQRLTGLLKWLRVAQGRGRSSCG*GPGRRS
Trigger: GGAACGGCGCCCGGGCCCCCAGCCACATGAGCTCCT...TCCTCTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CCA 90 bp CTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGGGCACTGCCCGAGGTaGCTGAGGAGGCCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: LGKGTEQRLTGLLKWLRVGHCPR*LRRPGH
Trigger: GTGCCCAGGCCTCCTCAGCCACCTCGGGCAGTGCCC...CACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CCA 90 bp TGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGCCGCTGGTCCTCGATaGCGCCGCGCAGCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: WLGKGTEQRLTGLLKWLRAAGPR*RRAAVP
Trigger: TGGCACTGCTGCGCGGCGCCATCGAGGACCAGCGGC...TCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CCA 90 bp GGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGAGGGGCCGCAGGGAGCCCTaGATGGCCTTGCCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: GAAVDGAAEMAESGTGQRGRREP*MALPGS
Trigger: AGACCCTGGCAAGGCCATCCAGGGCTCCCTGCGGCC...CCTCTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CCA 90 bp GACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGGGCCGCAGGGAGCCCTaGATGGCCTTGCCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: DGAAVDGAAEMAESGTGQGRREP*MALPGS
Trigger: AGACCCTGGCAAGGCCATCCAGGGCTCCCTGCGGCC...CTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CCA 90 bp GCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGAGGAGGGGCCGCAGGGAGCCCTaGATGGCCTTGCCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: AAVDGAAEMAESGTGQRRGRREP*MALPGS
Trigger: AGACCCTGGCAAGGCCATCCAGGGCTCCCTGCGGCC...CCTCCTCTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CCA 90 bp CAGAAAGAACTGGTACCGGGTAGGGCCACCGAAGCCCACCTGGGGGCATGGCAGAGCCCTTGCCAGCCCTaGGTTCCTGCTGCCGCAGCC +
Preference number: 4 (lower is better)
Translates to: QKELVPGRATEAHLGAWQSPCQP*VPAAAA
Trigger: GGCTGCGGCAGCAGGAACCCAGGGCTGGCAAGGGCT...CTGCCATGCCCCCAGGTGGGCTTCGGTGGCCCTACCCGGTACCAGTTCTTTCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp CTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGCCCTTGCCAGCCCTaGGTTCCTGCTGCCGCAGCC +
Preference number: 4 (lower is better)
Translates to: LAGERDGAAVDGAAEMAESPCQP*VPAAAA
Trigger: GGCTGCGGCAGCAGGAACCCAGGGCTGGCAAGGGCT...CTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR TCA 90 bp GAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGAGGAGCCTGCTGCAGCACCTaGCTGTCCTCTGGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: EQRLTGLLKWLRVAQGRGACCST*LSSGAR
Trigger: CCTGGCCCCAGAGGACAGTCAGGTGCTGCAGCAGGC...TCCTCTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR TCA 90 bp GCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGAGGAGGCCACAGCAGGTGGACTaGGGGAGCTCAGGGGGCCAT +
Preference number: 4 (lower is better)
Translates to: AAVDGAAEMAESGTGQRRPQQVD*GSSGGH
Trigger: ATGGCCCCCTGAGCTCCCTCAGTCCACCTGCTGTGG...CCTCCTCTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR TCA 90 bp GGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGAGGGTGCACGCAGGGCCTTaGGTTCCTGCTCCAGGCGAG +
Preference number: 4 (lower is better)
Translates to: GAAVDGAAEMAESGTGQRVHAGP*VPAPGE
Trigger: CTCGCCTGGAGCAGGAACTCAAGGCCCTGCGTGCAC...CCTCTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR TCA 90 bp GGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGAGGAGAGTGGTGTCACGCTaGGCAGCAGCCGTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: GAAVDGAAEMAESGTGQRRVVSR*AAAVAA
Trigger: GGCTGCCACGGCTGCTGCTCAGCGTGACACCACTCT...CCTCTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR TCA 90 bp GGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGAGGCCCTCCCTGCCTGACTaGCAACTGGCAGGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: GAAVDGAAEMAESGTGQRPSLPD*QLAGQR
Trigger: CCTCTGCCCTGCCAGTTGTCAGTCAGGCAGGGAGGG...CCTCTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp AAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGCTGCGGCCCGAGGGTaGCCAGCGCAGTCAGACACC +
Preference number: 4 (lower is better)
Translates to: KGTEQRLTGLLKWLRVAQAAARG*PAQSDT
Trigger: GGTGTCTGACTGCGCTGGGCACCCTCGGGCCGCAGC...CTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
CDS-3UTR GCA 90 bp GAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACATGGCCCTGGGGCTCCTaGCTGGTGGCCTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: ERDGAAVDGAAEMAESGTWPWGS*LVACCS
Trigger: GCTGCAGCAGGCCACCAGGCAGGAGCCCCAGGGCCA...TGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp GAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGAGGATCAGCATGCTGGAAGTaGGGGCTGCCGCGGGCACGG +
Preference number: 4 (lower is better)
Translates to: EQRLTGLLKWLRVAQGRGSACWK*GLPRAR
Trigger: CCGTGCCCGCGGCAGCCCGCACTTCCAGCATGCTGA...TCCTCTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp AAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGGCCAGGTGGGCACTaGCCGAGGTGGCTGAGGAGG +
Preference number: 4 (lower is better)
Translates to: KGTEQRLTGLLKWLRVAQGPGGH*PRWLRR
Trigger: CCTCCTCAGCCACCTCGGGCAGTGCCCACCTGGCCC...CTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp GGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCGGCGCCGCGCAGCAGTaGCATCTCTCGCTCCAGCTT +
Preference number: 4 (lower is better)
Translates to: GERDGAAVDGAAEMAESGGAAQQ*HLSLQL
Trigger: AAGCTGGAGCGAGAGATGGCACTGCTGCGCGGCGCC...GCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp GACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGGGCGCCGCGCAGCAGTaGCATCTCTCGCTCCAGCTT +
Preference number: 4 (lower is better)
Translates to: DGAAVDGAAEMAESGTGQGAAQQ*HLSLQL
Trigger: AAGCTGGAGCGAGAGATGGCACTGCTGCGCGGCGCC...CTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp GCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGAGGAGGGGCGCCGCGCAGCAGTaGCATCTCTCGCTCCAGCTT +
Preference number: 4 (lower is better)
Translates to: AAVDGAAEMAESGTGQRRGAAQQ*HLSLQL
Trigger: AAGCTGGAGCGAGAGATGGCACTGCTGCGCGGCGCC...CCTCCTCTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp GAGTGTCTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGCTCTTCGGCTCGAGCTaGCCGGCCCTGCGCATTGCC +
Preference number: 4 (lower is better)
Translates to: ECLAGERDGAAVDGAAEMLFGSS*PALRIA
Trigger: GGCAATGCGCAGGGCCGGGCAGCTCGAGCCGAAGAG...CATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAGACACTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp GAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGAGGACTCTTCGGCTCGAGCTaGCCGGCCCTGCGCATTGCC +
Preference number: 4 (lower is better)
Translates to: EQRLTGLLKWLRVAQGRGLFGSS*PALRIA
Trigger: GGCAATGCGCAGGGCCGGGCAGCTCGAGCCGAAGAG...TCCTCTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp GGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGAGGAGCTGCCCGAGCGCCTaGTGCAGCCGCTCCACTTTC +
Preference number: 4 (lower is better)
Translates to: GAAVDGAAEMAESGTGQRSCPSA*CSRSTF
Trigger: GAAAGTGGAGCGGCTGCAGCAGGCGCTCGGGCAGCT...CCTCTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp CAGAAAGAACTGGTACCGGGTAGGGCCACCGAAGCCCACCTGGGGGCATGGCAGTTCTCACAGGCTGCCTaGAGCTGCCCGAGCGCCTGC +
Preference number: 4 (lower is better)
Translates to: QKELVPGRATEAHLGAWQFSQAA*SCPSAC
Trigger: GCAGGCGCTCGGGCAGCTGCAGGCAGCCTGTGAGAA...CTGCCATGCCCCCAGGTGGGCTTCGGTGGCCCTACCCGGTACCAGTTCTTTCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp GAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGAGGACCGCTTCTCACAGGCTaGCTGCAGCTGCCCGAGCGC +
Preference number: 4 (lower is better)
Translates to: EQRLTGLLKWLRVAQGRGPLLTG*LQLPER
Trigger: GCGCTCGGGCAGCTGCAGGCAGCCTGTGAGAAGCGG...TCCTCTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp GAGTGTCTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGCCGCTTCTCACAGGCTaGCTGCAGCTGCCCGAGCGC +
Preference number: 4 (lower is better)
Translates to: ECLAGERDGAAVDGAAEMPLLTG*LQLPER
Trigger: GCGCTCGGGCAGCTGCAGGCAGCCTGTGAGAAGCGG...CATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAGACACTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp CTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGCCAGCCCTGGGTTCCTaGTGCCGCAGCCGCGAAAAC +
Preference number: 4 (lower is better)
Translates to: LAGERDGAAVDGAAEMAEPALGS*CRSREN
Trigger: GTTTTCGCGGCTGCGGCAGCAGGAACCCAGGGCTGG...CTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp AGTGTCTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGACCACCTGGGGCACCTaGCTGCTGTGCACGCAGGGC +
Preference number: 4 (lower is better)
Translates to: SVWLGKGTEQRLTGLLKWTTWGT*LLCTQG
Trigger: GCCCTGCGTGCACAGCAGGCAGGTGCCCCAGGTGGT...CCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAGACACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000513145.1
CDS-3UTR CCA 90 bp GGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGAGGCTGGACAATGGCCGGTaGCACCTGGCCCCAGAGCAC +
Preference number: 4 (lower is better)
Translates to: GAAVDGAAEMAESGTGQRLDNGR*HLAPEH
Trigger: GTGCTCTGGGGCCAGGTGCCACCGGCCATTGTCCAG...CCTCTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CCA 90 bp GGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGAGGGGGCCTGCTGCTGGATaGCTAGCAGCGTGCGCGTCT +
Preference number: 4 (lower is better)
Translates to: GAAVDGAAEMAESGTGQRGPAAG*LAACAS
Trigger: AGACGCGCACGCTGCTAGCCATCCAGCAGCAGGCCC...CCTCTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CCA 90 bp GACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGGGGCCTGCTGCTGGATaGCTAGCAGCGTGCGCGTCT +
Preference number: 4 (lower is better)
Translates to: DGAAVDGAAEMAESGTGQGPAAG*LAACAS
Trigger: AGACGCGCACGCTGCTAGCCATCCAGCAGCAGGCCC...CTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CCA 90 bp CTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGTGGTTCTCACCGCCCTaGTGCTCCTGGCCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: LGKGTEQRLTGLLKWLRVWFSPP*CSWPWG
Trigger: GCCCCAGGGCCAGGAGCACCAGGGCGGTGAGAACCA...CACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CCA 90 bp AGTGTCTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGTGGTTCTCACCGCCCTaGTGCTCCTGGCCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: SVWLGKGTEQRLTGLLKWWFSPP*CSWPWG
Trigger: GCCCCAGGGCCAGGAGCACCAGGGCGGTGAGAACCA...CCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAGACACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CCA 90 bp GCAGAGGGAGCTCAGCTCCTTTCTGAGCTGTCAGTTGCTACCCCAGTAGCAGGCTGGGAGGAGCTCATGTaGCTGGGGGCCCGGGCGCCG +
Preference number: 4 (lower is better)
Translates to: AEGAQLLSELSVATPVAGWEELM*LGARAP
Trigger: CGGCGCCCGGGCCCCCAGCCACATGAGCTCCTCCCA...GCCTGCTACTGGGGTAGCAACTGACAGCTCAGAAAGGAGCTGAGCTCCCTCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp CAAAGCATCTGGTGCTGCTTTAGGGCGCTGGGCATGGGTAGCTTGAGGAGCCAGTGGGAGGAGCTCATGTaGCTGGGGGCCCGGGCGCCG +
Preference number: 4 (lower is better)
Translates to: QSIWCCFRALGMGSLRSQWEELM*LGARAP
Trigger: CGGCGCCCGGGCCCCCAGCCACATGAGCTCCTCCCA...CTGGCTCCTCAAGCTACCCATGCCCAGCGCCCTAAAGCAGCACCAGATGCTTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp CAGAAAGAACTGGTACCGGGTAGGGCCACCGAAGCCCACCTGGGGGCATGGCAGCCAGGGCCTCACGCTTaGAGGAGGCTCTGGTCAGGC +
Preference number: 4 (lower is better)
Translates to: QKELVPGRATEAHLGAWQPGPHA*RRLWSG
Trigger: GCCTGACCAGAGCCTCCTCCAAGCGTGAGGCCCTGG...CTGCCATGCCCCCAGGTGGGCTTCGGTGGCCCTACCCGGTACCAGTTCTTTCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp CTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGGCCGCAGGGAGCCCTaGATGGCCTTGCCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: LGKGTEQRLTGLLKWLRVGRREP*MALPGS
Trigger: AGACCCTGGCAAGGCCATCCAGGGCTCCCTGCGGCC...CACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CCA 90 bp GGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGAGGCAGATGGCACCGACTTaGCAGGCCGCAGGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: GAAVDGAAEMAESGTGQRQMAPT*QAAGSP
Trigger: AGGGCTCCCTGCGGCCTGCCAAGTCGGTGCCATCTG...CCTCTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CCA 90 bp GCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGAGGAGGCAGATGGCACCGACTTaGCAGGCCGCAGGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: AAVDGAAEMAESGTGQRRQMAPT*QAAGSP
Trigger: AGGGCTCCCTGCGGCCTGCCAAGTCGGTGCCATCTG...CCTCCTCTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CCA 90 bp CAGAAAGAACTGGTACCGGGTAGGGCCACCGAAGCCCACCTGGGGGCATGGCAGCAGATGGCACCGACTTaGCAGGCCGCAGGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: QKELVPGRATEAHLGAWQQMAPT*QAAGSP
Trigger: AGGGCTCCCTGCGGCCTGCCAAGTCGGTGCCATCTG...CTGCCATGCCCCCAGGTGGGCTTCGGTGGCCCTACCCGGTACCAGTTCTTTCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp GCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGAGGAGGGGTGGAGGTGCTGTCTaGGGGGCCCTCAGTCTGGGT +
Preference number: 4 (lower is better)
Translates to: AAVDGAAEMAESGTGQRRGGGAV*GALSLG
Trigger: ACCCAGACTGAGGGCCCCCCAGACAGCACCTCCACC...CCTCCTCTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CCA 90 bp GACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGGCCACTGCTACCACCTaGGGCACCTGCCTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: DGAAVDGAAEMAESGTGQATATT*GTCLLC
Trigger: GCACAGCAGGCAGGTGCCCCAGGTGGTAGCAGTGGC...CTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513145.1
CDS-3UTR TCA 90 bp GAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGAGGAGCAGCTGCTCCTGGATaGGGCGGTGCAGGACTGTCC +
Preference number: 4 (lower is better)
Translates to: EQRLTGLLKWLRVAQGRGAAAPG*GGAGLS
Trigger: GGACAGTCCTGCACCGCCTCATCCAGGAGCAGCTGC...TCCTCTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR TCA 90 bp AGTGTCTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGGTGCACGCAGGGCCTTaGGTTCCTGCTCCAGGCGAG +
Preference number: 4 (lower is better)
Translates to: SVWLGKGTEQRLTGLLKWVHAGP*VPAPGE
Trigger: CTCGCCTGGAGCAGGAACTCAAGGCCCTGCGTGCAC...CCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAGACACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR TCA 90 bp GAGTGTCTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGACAGTCGCAGGGCGCTaGGCTCTGGAGACCCACCAC +
Preference number: 4 (lower is better)
Translates to: ECLAGERDGAAVDGAAEMTVAGR*ALETHH
Trigger: GTGGTGGGTCTCCAGAGCTCAGCGCCCTGCGACTGT...CATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAGACACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR TCA 90 bp AGTGTCTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGACAGTCGCAGGGCGCTaGGCTCTGGAGACCCACCAC +
Preference number: 4 (lower is better)
Translates to: SVWLGKGTEQRLTGLLKWTVAGR*ALETHH
Trigger: GTGGTGGGTCTCCAGAGCTCAGCGCCCTGCGACTGT...CCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAGACACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR TCA 90 bp GAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGAGGAAGAGTGGTGTCACGCTaGGCAGCAGCCGTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: EQRLTGLLKWLRVAQGRGRVVSR*AAAVAA
Trigger: GGCTGCCACGGCTGCTGCTCAGCGTGACACCACTCT...TCCTCTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR TCA 90 bp TGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAAGAGTGGTGTCACGCTaGGCAGCAGCCGTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: WLGKGTEQRLTGLLKWLRRVVSR*AAAVAA
Trigger: GGCTGCCACGGCTGCTGCTCAGCGTGACACCACTCT...TCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp GGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCTCCTGGATGAGGCGGTaGAGGACTGTCCCCGAGGAG +
Preference number: 4 (lower is better)
Translates to: GERDGAAVDGAAEMAESGSWMRR*RTVPEE
Trigger: CTCCTCGGGGACAGTCCTGCACCGCCTCATCCAGGA...GCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp TGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGACCCCTCAGGGCCTGCTaGTGGATGGCTAGCAGCGTG +
Preference number: 4 (lower is better)
Translates to: WLGKGTEQRLTGLLKWLRPLRAC*WMASSV
Trigger: CACGCTGCTAGCCATCCAGCAGCAGGCCCTGAGGGG...TCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp GAGTGTCTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGCCACCCCTCAGGGCCTaGTGCTGGATGGCTAGCAGC +
Preference number: 4 (lower is better)
Translates to: ECLAGERDGAAVDGAAEMPPLRA*CWMASS
Trigger: GCTGCTAGCCATCCAGCAGCAGGCCCTGAGGGGTGG...CATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAGACACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp TTTAGGGCGCTGGGCATGGGTAGCTTGAGGAGCCAGCCTCCTGGGCACTGTTTTTGGCCCTGGGGCTCCTaGCTGGTGGCCTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: FRALGMGSLRSQPPGHCFWPWGS*LVACCS
Trigger: GCTGCAGCAGGCCACCAGGCAGGAGCCCCAGGGCCA...AAAACAGTGCCCAGGAGGCTGGCTCCTCAAGCTACCCATGCCCAGCGCCCTAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp GACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGATGTGGCCGGGTCCCTaGCTGCTGGGCCGCATAGTA +
Preference number: 4 (lower is better)
Translates to: DGAAVDGAAEMAESGTGQMWPGP*LLGRIV
Trigger: TACTATGCGGCCCAGCAGGCAGGGACCCGGCCACAT...CTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp GCAGAGGGAGCTCAGCTCCTTTCTGAGCTGTCAGTTGCTACCCCAGTAGCAGGCGAGCGCACGTGCCCATaGCTCAGCTCCCGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: AEGAQLLSELSVATPVAGERTCP*LSSRRA
Trigger: GGCCCTGCGGGAGCTGAGGCATGGGCACGTGCGCTC...GCCTGCTACTGGGGTAGCAACTGACAGCTCAGAAAGGAGCTGAGCTCCCTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp AGTGTCTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTCAACGAGCGCACGTaGCCATGCCTCAGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: SVWLGKGTEQRLTGLLKWLNERT*PCLSSR
Trigger: GCGGGAGCTGAGGCATGGGCACGTGCGCTCGTTGAG...CCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAGACACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp TTTAGGGCGCTGGGCATGGGTAGCTTGAGGAGCCAGCCTCCTGGGCACTGTTTTGGGCCAGGTGGGCACTaGCCGAGGTGGCTGAGGAGG +
Preference number: 4 (lower is better)
Translates to: FRALGMGSLRSQPPGHCFGPGGH*PRWLRR
Trigger: CCTCCTCAGCCACCTCGGGCAGTGCCCACCTGGCCC...AAAACAGTGCCCAGGAGGCTGGCTCCTCAAGCTACCCATGCCCAGCGCCCTAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp GAGTGTCTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCATTGCCCAGAGCCTaGTCCAGCAGCTCGGCACGC +
Preference number: 4 (lower is better)
Translates to: ECLAGERDGAAVDGAAEMALPRA*SSSSAR
Trigger: GCGTGCCGAGCTGCTGGAGCAGGCTCTGGGCAATGC...CATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAGACACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp TGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGCATTGCCCAGAGCCTaGTCCAGCAGCTCGGCACGC +
Preference number: 4 (lower is better)
Translates to: WLGKGTEQRLTGLLKWLRALPRA*SSSSAR
Trigger: GCGTGCCGAGCTGCTGGAGCAGGCTCTGGGCAATGC...TCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp TGTCTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTTTCTCACAGGCTGCCTaGAGCTGCCCGAGCGCCTGC +
Preference number: 4 (lower is better)
Translates to: CLAGERDGAAVDGAAEMAFSQAA*SCPSAC
Trigger: GCAGGCGCTCGGGCAGCTGCAGGCAGCCTGTGAGAA...AGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp AGTGTCTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGTTCTCACAGGCTGCCTaGAGCTGCCCGAGCGCCTGC +
Preference number: 4 (lower is better)
Translates to: SVWLGKGTEQRLTGLLKWFSQAA*SCPSAC
Trigger: GCAGGCGCTCGGGCAGCTGCAGGCAGCCTGTGAGAA...CCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAGACACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp GCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGAGGAGGGCACCTGCCTGTCTCTaGTGTGCACGCAGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: AAVDGAAEMAESGTGQRRAPACL*CARRAL
Trigger: CAAGGCCCTGCGTGCACAGCAGAGACAGGCAGGTGC...CCTCCTCTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp GGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGAGGACCACCTGGGGCACCTaGCTGTCTCTGCTGTGCACG +
Preference number: 4 (lower is better)
Translates to: GAAVDGAAEMAESGTGQRTTWGT*LSLLCT
Trigger: CGTGCACAGCAGAGACAGGCAGGTGCCCCAGGTGGT...CCTCTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp GCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGAGGAGGACCCACCACTGCCACTaGTACCACCTGGGGCACCTG +
Preference number: 4 (lower is better)
Translates to: AAVDGAAEMAESGTGQRRTHHCH*YHLGHL
Trigger: CAGGTGCCCCAGGTGGTAGCAGTGGCAGTGGTGGGT...CCTCCTCTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp CTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGACCCACCACTGCCACTaGTACCACCTGGGGCACCTG +
Preference number: 4 (lower is better)
Translates to: LAGERDGAAVDGAAEMAETHHCH*YHLGHL
Trigger: CAGGTGCCCCAGGTGGTAGCAGTGGCAGTGGTGGGT...CTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp GCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGAGGAGGCTGGAGACCCACCACTaGCACTGCTACCACCTGGGG +
Preference number: 4 (lower is better)
Translates to: AAVDGAAEMAESGTGQRRLETHH*HCYHLG
Trigger: CCCCAGGTGGTAGCAGTGGCAGTGGTGGGTCTCCAG...CCTCCTCTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp GACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGGCCCTGGGTTCCTGCTaGCGCAGCCGCGAAAACAGA +
Preference number: 4 (lower is better)
Translates to: DGAAVDGAAEMAESGTGQALGSC*RSRENR
Trigger: TCTGTTTTCGCGGCTGCGGCAGCAGGAACCCAGGGC...CTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CCA 90 bp AGTGTCTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGGACAATGGCCGGTaGCACCTGGCCCCAGAGCAC +
Preference number: 4 (lower is better)
Translates to: SVWLGKGTEQRLTGLLKWLDNGR*HLAPEH
Trigger: GTGCTCTGGGGCCAGGTGCCACCGGCCATTGTCCAG...CCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAGACACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CCA 90 bp AGTGTCTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTCAGGGCCTGCTGCTaGATGGCTAGCAGCGTGCGC +
Preference number: 4 (lower is better)
Translates to: SVWLGKGTEQRLTGLLKWLRACC*MASSVR
Trigger: GCGCACGCTGCTAGCCATCCAGCAGCAGGCCCTGAG...CCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAGACACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CCA 90 bp CAGAAAGAACTGGTACCGGGTAGGGCCACCGAAGCCCACCTGGGGGCATGGCAGGCTCCTCTCCCTTGCTaGGCTGTGGGCATAGCCGGT +
Preference number: 4 (lower is better)
Translates to: QKELVPGRATEAHLGAWQAPLPC*AVGIAG
Trigger: ACCGGCTATGCCCACAGCCCAGCAAGGGAGAGGAGC...CTGCCATGCCCCCAGGTGGGCTTCGGTGGCCCTACCCGGTACCAGTTCTTTCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp TTTAGGGCGCTGGGCATGGGTAGCTTGAGGAGCCAGCCTCCTGGGCACTGTTTTAGGAGCTCATGTGGCTaGGGGCCCGGGCGCCGTTCC +
Preference number: 4 (lower is better)
Translates to: FRALGMGSLRSQPPGHCFRSSCG*GPGRRS
Trigger: GGAACGGCGCCCGGGCCCCCAGCCACATGAGCTCCT...AAAACAGTGCCCAGGAGGCTGGCTCCTCAAGCTACCCATGCCCAGCGCCCTAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp GGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCCTGACTTCAGCATGCTaGAAGTGCGGGCTGCCGCGG +
Preference number: 4 (lower is better)
Translates to: GERDGAAVDGAAEMAESGLTSAC*KCGLPR
Trigger: CCGCGGCAGCCCGCACTTCCAGCATGCTGAAGTCAG...GCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CCA 90 bp GCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGAGGAGGCTGACTTCAGCATGCTaGAAGTGCGGGCTGCCGCGG +
Preference number: 4 (lower is better)
Translates to: AAVDGAAEMAESGTGQRRLTSAC*KCGLPR
Trigger: CCGCGGCAGCCCGCACTTCCAGCATGCTGAAGTCAG...CCTCCTCTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CCA 90 bp GCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGAGGAGGGAGCTCAGGGGGCCATaGCCGAGAGCAGCTGGATGT +
Preference number: 4 (lower is better)
Translates to: AAVDGAAEMAESGTGQRRELRGP*PRAAGC
Trigger: ACATCCAGCTGCTCTCGGCCATGGCCCCCTGAGCTC...CCTCCTCTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CCA 90 bp GAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGAGGACCAGGGCCTCACGCTTaGAGGAGGCTCTGGTCAGGC +
Preference number: 4 (lower is better)
Translates to: EQRLTGLLKWLRVAQGRGPGPHA*RRLWSG
Trigger: GCCTGACCAGAGCCTCCTCCAAGCGTGAGGCCCTGG...TCCTCTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CCA 90 bp CAAAGCATCTGGTGCTGCTTTAGGGCGCTGGGCATGGGTAGCTTGAGGAGCCAGGCCGCTGGTCCTCGATaGCGCCGCGCAGCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: QSIWCCFRALGMGSLRSQAAGPR*RRAAVP
Trigger: TGGCACTGCTGCGCGGCGCCATCGAGGACCAGCGGC...CTGGCTCCTCAAGCTACCCATGCCCAGCGCCCTAAAGCAGCACCAGATGCTTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp GGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCGCCACTGCTACCACCTaGGGCACCTGCCTGTCTCTG +
Preference number: 4 (lower is better)
Translates to: GERDGAAVDGAAEMAESGATATT*GTCLSL
Trigger: CAGAGACAGGCAGGTGCCCCAGGTGGTAGCAGTGGC...GCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp GGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGAGGCAGGGCGCTGAGCTCTaGAGACCCACCACTGCCACT +
Preference number: 4 (lower is better)
Translates to: GAAVDGAAEMAESGTGQRQGAEL*RPTTAT
Trigger: AGTGGCAGTGGTGGGTCTCCAGAGCTCAGCGCCCTG...CCTCTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CCA 90 bp CTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGCAGGGCGCTGAGCTCTaGAGACCCACCACTGCCACT +
Preference number: 4 (lower is better)
Translates to: LAGERDGAAVDGAAEMAEQGAEL*RPTTAT
Trigger: AGTGGCAGTGGTGGGTCTCCAGAGCTCAGCGCCCTG...CTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CCA 90 bp GAGTGTCTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGCAGATGGCACCGACTTaGCAGGCCGCAGGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: ECLAGERDGAAVDGAAEMQMAPT*QAAGSP
Trigger: AGGGCTCCCTGCGGCCTGCCAAGTCGGTGCCATCTG...CATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAGACACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CCA 90 bp CTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGCTCTGCTCCCGTGTTTaGCATGGGCAGCAGGGGGAG +
Preference number: 4 (lower is better)
Translates to: LAGERDGAAVDGAAEMAELCSRV*HGQQGE
Trigger: CTCCCCCTGCTGCCCATGCCAAACACGGGAGCAGAG...CTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CCA 90 bp TGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGCTGTCAGGCTCCGGTaGCAGGCAGGTGGAGGTGCT +
Preference number: 4 (lower is better)
Translates to: WLGKGTEQRLTGLLKWLRAVRLR*QAGGGA
Trigger: AGCACCTCCACCTGCCTGCCACCGGAGCCTGACAGC...TCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CCA 90 bp GAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGAGGAGCTGTCAGGCTCCGGTaGCAGGCAGGTGGAGGTGCT +
Preference number: 4 (lower is better)
Translates to: EQRLTGLLKWLRVAQGRGAVRLR*QAGGGA
Trigger: AGCACCTCCACCTGCCTGCCACCGGAGCCTGACAGC...TCCTCTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CCA 90 bp CAGAAAGAACTGGTACCGGGTAGGGCCACCGAAGCCCACCTGGGGGCATGGCAGGTGAACCAGTCCACCTaGTGTCCACGGGCAGCCGTC +
Preference number: 4 (lower is better)
Translates to: QKELVPGRATEAHLGAWQVNQST*CPRAAV
Trigger: GACGGCTGCCCGTGGACACCAGGTGGACTGGTTCAC...CTGCCATGCCCCCAGGTGGGCTTCGGTGGCCCTACCCGGTACCAGTTCTTTCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp CTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCCACTTCAAGAGGCTaGTGGTGGGGGTCCCGTGGG +
Preference number: 4 (lower is better)
Translates to: LGKGTEQRLTGLLKWLRVATSRG*WWGSRG
Trigger: CCCACGGGACCCCCACCACCAGCCTCTTGAAGTGGC...CACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp CTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGCCACCGAAGCCCACCTaGGGGCATGGCAGATGTCTG +
Preference number: 4 (lower is better)
Translates to: LAGERDGAAVDGAAEMAEPPKPT*GHGRCL
Trigger: CAGACATCTGCCATGCCCCCAGGTGGGCTTCGGTGG...CTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR TCA 90 bp AAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGCCACAGCAGGTGGACTaGGGGAGCTCAGGGGGCCAT +
Preference number: 4 (lower is better)
Translates to: KGTEQRLTGLLKWLRVAQPQQVD*GSSGGH
Trigger: ATGGCCCCCTGAGCTCCCTCAGTCCACCTGCTGTGG...CTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR TCA 90 bp GAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAACAGTCGCAGGGCGCTaGGCTCTGGAGACCCACCAC +
Preference number: 4 (lower is better)
Translates to: ERDGAAVDGAAEMAESGTTVAGR*ALETHH
Trigger: GTGGTGGGTCTCCAGAGCTCAGCGCCCTGCGACTGT...TGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR TCA 90 bp GAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAAGAGTGGTGTCACGCTaGGCAGCAGCCGTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: ERDGAAVDGAAEMAESGTRVVSR*AAAVAA
Trigger: GGCTGCCACGGCTGCTGCTCAGCGTGACACCACTCT...TGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp TGTCTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTTCCTGGATGAGGCGGTaGAGGACTGTCCCCGAGGAG +
Preference number: 4 (lower is better)
Translates to: CLAGERDGAAVDGAAEMASWMRR*RTVPEE
Trigger: CTCCTCGGGGACAGTCCTGCACCGCCTCATCCAGGA...AGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp GGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGAGGGCGTCTCAGTCAGGTTaGCGTAGCGCAGCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: GAAVDGAAEMAESGTGQRASQSG*RSAAAP
Trigger: AGGAGCAGCTGCGCTACGGCAACCTGACTGAGACGC...CCTCTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp GGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGAGGGGATGGCTAGCAGCGTaGGCGTCTCAGTCAGGTTGC +
Preference number: 4 (lower is better)
Translates to: GAAVDGAAEMAESGTGQRGWLAA*ASQSGC
Trigger: GCAACCTGACTGAGACGCGCACGCTGCTAGCCATCC...CCTCTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp AAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGCCACCCCTCAGGGCCTaGTGCTGGATGGCTAGCAGC +
Preference number: 4 (lower is better)
Translates to: KGTEQRLTGLLKWLRVAQPPLRA*CWMASS
Trigger: GCTGCTAGCCATCCAGCAGCAGGCCCTGAGGGGTGG...CTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp TGTCTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGCAGCTCCTCTCCCTTaGTGGGCTGTGGGCATAGCC +
Preference number: 4 (lower is better)
Translates to: CLAGERDGAAVDGAAEMAAAPLP*WAVGIA
Trigger: GGCTATGCCCACAGCCCAGCAAGGGAGAGGAGCTGC...AGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp AGTGTCTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGGCAGCTCCTCTCCCTTaGTGGGCTGTGGGCATAGCC +
Preference number: 4 (lower is better)
Translates to: SVWLGKGTEQRLTGLLKWAAPLP*WAVGIA
Trigger: GGCTATGCCCACAGCCCAGCAAGGGAGAGGAGCTGC...CCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAGACACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp GAGTGTCTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCAGCTCCTCTCCCTTaGTGGGCTGTGGGCATAGCC +
Preference number: 4 (lower is better)
Translates to: ECLAGERDGAAVDGAAEMAAPLP*WAVGIA
Trigger: GGCTATGCCCACAGCCCAGCAAGGGAGAGGAGCTGC...CATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAGACACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp AGTGTCTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGATGTGGCCGGGTCCCTaGCTGCTGGGCCGCATAGTA +
Preference number: 4 (lower is better)
Translates to: SVWLGKGTEQRLTGLLKWMWPGP*LLGRIV
Trigger: TACTATGCGGCCCAGCAGGCAGGGACCCGGCCACAT...CCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAGACACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp GAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGAGGAATGTGGCCGGGTCCCTaGCTGCTGGGCCGCATAGTA +
Preference number: 4 (lower is better)
Translates to: EQRLTGLLKWLRVAQGRGMWPGP*LLGRIV
Trigger: TACTATGCGGCCCAGCAGGCAGGGACCCGGCCACAT...TCCTCTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp CAAGAGGCTGGTGGTGGGGGTCCCGTGGGCATTTATAGGGCTCAAGATAGAGGAGAGCGCACGTGCCCATaGCTCAGCTCCCGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: QEAGGGGPVGIYRAQDRGERTCP*LSSRRA
Trigger: GGCCCTGCGGGAGCTGAGGCATGGGCACGTGCGCTC...TCCTCTATCTTGAGCCCTATAAATGCCCACGGGACCCCCACCACCAGCCTCTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp CAAAGCATCTGGTGCTGCTTTAGGGCGCTGGGCATGGGTAGCTTGAGGAGCCAGTCAGCATGCTGGAAGTaGGGGCTGCCGCGGGCACGG +
Preference number: 4 (lower is better)
Translates to: QSIWCCFRALGMGSLRSQSACWK*GLPRAR
Trigger: CCGTGCCCGCGGCAGCCCGCACTTCCAGCATGCTGA...CTGGCTCCTCAAGCTACCCATGCCCAGCGCCCTAAAGCAGCACCAGATGCTTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp GGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGAGGGGAGGCACCTGGGCCTaGAGGATCCTGACTTCAGCA +
Preference number: 4 (lower is better)
Translates to: GAAVDGAAEMAESGTGQRGGTWA*RILTSA
Trigger: TGCTGAAGTCAGGATCCTGCAGGCCCAGGTGCCTCC...CCTCTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp GACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGGGAGGCACCTGGGCCTaGAGGATCCTGACTTCAGCA +
Preference number: 4 (lower is better)
Translates to: DGAAVDGAAEMAESGTGQGGTWA*RILTSA
Trigger: TGCTGAAGTCAGGATCCTGCAGGCCCAGGTGCCTCC...CTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp CAGAAAGAACTGGTACCGGGTAGGGCCACCGAAGCCCACCTGGGGGCATGGCAGGGGCCTCCTGTGTCTTaGTTGCCAGGCGGCGATTTG +
Preference number: 4 (lower is better)
Translates to: QKELVPGRATEAHLGAWQGPPVS*LPGGDL
Trigger: CAAATCGCCGCCTGGCAAGCAAGACACAGGAGGCCC...CTGCCATGCCCCCAGGTGGGCTTCGGTGGCCCTACCCGGTACCAGTTCTTTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp GCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGAGGAGGGGGCCTCCTGTGTCTTaGTTGCCAGGCGGCGATTTG +
Preference number: 4 (lower is better)
Translates to: AAVDGAAEMAESGTGQRRGPPVS*LPGGDL
Trigger: CAAATCGCCGCCTGGCAAGCAAGACACAGGAGGCCC...CCTCCTCTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp GCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGAGGAGGAGGGCCTTGAGTTCCTaGTCCAGGCGAGTCCGCAGA +
Preference number: 4 (lower is better)
Translates to: AAVDGAAEMAESGTGQRRRALSS*SRRVRR
Trigger: TCTGCGGACTCGCCTGGAGCAGGAACTCAAGGCCCT...CCTCCTCTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp TGTCTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTCTGGAGACCCACCACTaGCACTGCTACCACCTGGGG +
Preference number: 4 (lower is better)
Translates to: CLAGERDGAAVDGAAEMALETHH*HCYHLG
Trigger: CCCCAGGTGGTAGCAGTGGCAGTGGTGGGTCTCCAG...AGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp TGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAAGCCCTGGATGGCCTTaGCAGGGTCTCTCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: WLGKGTEQRLTGLLKWLRSPGWP*QGLSWS
Trigger: GCTCCAGGAGAGACCCTGGCAAGGCCATCCAGGGCT...TCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp TGTCTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGCCCTGGGTTCCTGCTaGCGCAGCCGCGAAAACAGA +
Preference number: 4 (lower is better)
Translates to: CLAGERDGAAVDGAAEMAALGSC*RSRENR
Trigger: TCTGTTTTCGCGGCTGCGGCAGCAGGAACCCAGGGC...AGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp AAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGCCAGCCCTGGGTTCCTaGTGCCGCAGCCGCGAAAAC +
Preference number: 4 (lower is better)
Translates to: KGTEQRLTGLLKWLRVAQPALGS*CRSREN
Trigger: GTTTTCGCGGCTGCGGCAGCAGGAACCCAGGGCTGG...CTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp CTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGGGGTGCTCCCATCTCTaGTCCCGTGTTTGGCATGGG +
Preference number: 4 (lower is better)
Translates to: LAGERDGAAVDGAAEMAEGCSHL*SRVWHG
Trigger: CCCATGCCAAACACGGGAGCAGAGATGGGAGCACCC...CTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp AGTGTCTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGGGCCCTCAGTCTGGGTaGTCCCATCTCTGCTCCCGT +
Preference number: 4 (lower is better)
Translates to: SVWLGKGTEQRLTGLLKWGPQSG*SHLCSR
Trigger: ACGGGAGCAGAGATGGGAGCACCCAGACTGAGGGCC...CCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAGACACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp TGTCTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGGCACCTGCCTGCTGTaGACGCAGGGCCTTGAGTTC +
Preference number: 4 (lower is better)
Translates to: CLAGERDGAAVDGAAEMAGTCLL*TQGLEF
Trigger: GAACTCAAGGCCCTGCGTGCACAGCAGGCAGGTGCC...AGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513145.1
CDS-3UTR CCA 90 bp GGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGAGGGTGTTCTCTGCCAGGTaGTTCTCACCGCCCTGGTGC +
Preference number: 4 (lower is better)
Translates to: GAAVDGAAEMAESGTGQRVFSAR*FSPPWC
Trigger: GCACCAGGGCGGTGAGAACCACCTGGCAGAGAACAC...CCTCTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CCA 90 bp TGTCTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGCTCCTCTCCCTTGCTaGGCTGTGGGCATAGCCGGT +
Preference number: 4 (lower is better)
Translates to: CLAGERDGAAVDGAAEMAAPLPC*AVGIAG
Trigger: ACCGGCTATGCCCACAGCCCAGCAAGGGAGAGGAGC...AGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CCA 90 bp GGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCTGGCCTCCTCATAGGTaGGCAGCTCCTCTCCCTTGC +
Preference number: 4 (lower is better)
Translates to: GERDGAAVDGAAEMAESGWPPHR*AAPLPC
Trigger: GCAAGGGAGAGGAGCTGCCCACCTATGAGGAGGCCA...GCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CCA 90 bp AGTGTCTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGGCGGGCACGGTACCGTaGGTCAGTGACAGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: SVWLGKGTEQRLTGLLKWAGTVP*VSDSSG
Trigger: ACCACTGCTGTCACTGACCCACGGTACCGTGCCCGC...CCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAGACACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CCA 90 bp TGTCTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGCGGGCACGGTACCGTaGGTCAGTGACAGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: CLAGERDGAAVDGAAEMAAGTVP*VSDSSG
Trigger: ACCACTGCTGTCACTGACCCACGGTACCGTGCCCGC...AGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CCA 90 bp TGTCTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTCTGACTTCAGCATGCTaGAAGTGCGGGCTGCCGCGG +
Preference number: 4 (lower is better)
Translates to: CLAGERDGAAVDGAAEMALTSAC*KCGLPR
Trigger: CCGCGGCAGCCCGCACTTCCAGCATGCTGAAGTCAG...AGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CCA 90 bp TGTCTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGCTCAGGGGGCCATaGCCGAGAGCAGCTGGATGT +
Preference number: 4 (lower is better)
Translates to: CLAGERDGAAVDGAAEMAELRGP*PRAAGC
Trigger: ACATCCAGCTGCTCTCGGCCATGGCCCCCTGAGCTC...AGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAGACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CCA 90 bp AGTGTCTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGGTCAGGCTCTCATaGGCCTCAGAGAGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: SVWLGKGTEQRLTGLLKWLVRLS*ASESRW
Trigger: CCAGCGGCTCTCTGAGGCCCATGAGAGCCTGACCAG...CCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAGACACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CCA 90 bp GACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGGCTTGGAGGAGGCTCTaGTCAGGCTCTCATGGGCCT +
Preference number: 4 (lower is better)
Translates to: DGAAVDGAAEMAESGTGQAWRRL*SGSHGP
Trigger: AGGCCCATGAGAGCCTGACCAGAGCCTCCTCCAAGC...CTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CCA 90 bp TGTCTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGCCACTGCTACCACCTaGGGCACCTGCCTGTCTCTG +
Preference number: 4 (lower is better)
Translates to: CLAGERDGAAVDGAAEMAATATT*GTCLSL
Trigger: CAGAGACAGGCAGGTGCCCCAGGTGGTAGCAGTGGC...AGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp AGTGTCTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCAGGGCGCTGAGCTCTaGAGACCCACCACTGCCACT +
Preference number: 4 (lower is better)
Translates to: SVWLGKGTEQRLTGLLKWQGAEL*RPTTAT
Trigger: AGTGGCAGTGGTGGGTCTCCAGAGCTCAGCGCCCTG...CCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAGACACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CCA 90 bp TGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGACAGGGCGCTGAGCTCTaGAGACCCACCACTGCCACT +
Preference number: 4 (lower is better)
Translates to: WLGKGTEQRLTGLLKWLRQGAEL*RPTTAT
Trigger: AGTGGCAGTGGTGGGTCTCCAGAGCTCAGCGCCCTG...TCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CCA 90 bp GGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCCTGCTGGGTGAGGGCTaGGGGGAATGTCGGATGAGA +
Preference number: 4 (lower is better)
Translates to: GERDGAAVDGAAEMAESGLLGEG*GECRMR
Trigger: TCTCATCCGACATTCCCCCCAGCCCTCACCCAGCAG...GCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CCA 90 bp GCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGAGGAGGAGCCGCGAAAACAGATaGCACCGACTTGGCAGGCCG +
Preference number: 4 (lower is better)
Translates to: AAVDGAAEMAESGTGQRRSRENR*HRLGRP
Trigger: CGGCCTGCCAAGTCGGTGCCATCTGTTTTCGCGGCT...CCTCCTCTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CCA 90 bp AGTGTCTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTCCCGTGTTTGGCATaGGCAGCAGGGGGAGCTGTG +
Preference number: 4 (lower is better)
Translates to: SVWLGKGTEQRLTGLLKWLPCLA*AAGGAV
Trigger: CACAGCTCCCCCTGCTGCCCATGCCAAACACGGGAG...CCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAGACACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CCA 90 bp GAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGAGGACTCCCGTGTTTGGCATaGGCAGCAGGGGGAGCTGTG +
Preference number: 4 (lower is better)
Translates to: EQRLTGLLKWLRVAQGRGLPCLA*AAGGAV
Trigger: CACAGCTCCCCCTGCTGCCCATGCCAAACACGGGAG...TCCTCTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CCA 90 bp GAGTGTCTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGCTCTGCTCCCGTGTTTaGCATGGGCAGCAGGGGGAG +
Preference number: 4 (lower is better)
Translates to: ECLAGERDGAAVDGAAEMLCSRV*HGQQGE
Trigger: CTCCCCCTGCTGCCCATGCCAAACACGGGAGCAGAG...CATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAGACACTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CCA 90 bp AAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGTGGAGGTGCTGTCTaGGGGGCCCTCAGTCTGGGT +
Preference number: 4 (lower is better)
Translates to: KGTEQRLTGLLKWLRVAQGGGAV*GALSLG
Trigger: ACCCAGACTGAGGGCCCCCCAGACAGCACCTCCACC...CTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CCA 90 bp GAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGTGGAGGTGCTGTCTaGGGGGCCCTCAGTCTGGGT +
Preference number: 4 (lower is better)
Translates to: ERDGAAVDGAAEMAESGTGGGAV*GALSLG
Trigger: ACCCAGACTGAGGGCCCCCCAGACAGCACCTCCACC...TGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CCA 90 bp GGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGAGGGGGGAGCACAGCCCATaGAGACACATCGGAACCTGC +
Preference number: 4 (lower is better)
Translates to: GAAVDGAAEMAESGTGQRGEHSP*RHIGTC
Trigger: GCAGGTTCCGATGTGTCTCCATGGGCTGTGCTCCCC...CCTCTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp CTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGACTTCAAGAGGCTGGTaGTGGGGGTCCCGTGGGCAT +
Preference number: 4 (lower is better)
Translates to: LAGERDGAAVDGAAEMAETSRGW*WGSRGH
Trigger: ATGCCCACGGGACCCCCACCACCAGCCTCTTGAAGT...CTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp GACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGGCCCACCTGGGGGCATaGCAGATGTCTGTTCACGGT +
Preference number: 4 (lower is better)
Translates to: DGAAVDGAAEMAESGTGQAHLGA*QMSVHG
Trigger: ACCGTGAACAGACATCTGCCATGCCCCCAGGTGGGC...CTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp CAGAAAGAACTGGTACCGGGTAGGGCCACCGAAGCCCACCTGGGGGCATGGCAGGCCCACCTGGGGGCATaGCAGATGTCTGTTCACGGT +
Preference number: 4 (lower is better)
Translates to: QKELVPGRATEAHLGAWQAHLGA*QMSVHG
Trigger: ACCGTGAACAGACATCTGCCATGCCCCCAGGTGGGC...CTGCCATGCCCCCAGGTGGGCTTCGGTGGCCCTACCCGGTACCAGTTCTTTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR TCA 90 bp CTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGGGTACCGTGGGTCAGTaGCAGCAGTGGTGGTCTCAT +
Preference number: 4 (lower is better)
Translates to: LAGERDGAAVDGAAEMAEGTVGQ*QQWWSH
Trigger: ATGAGACCACCACTGCTGTCACTGACCCACGGTACC...CTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR TCA 90 bp CAAAGCATCTGGTGCTGCTTTAGGGCGCTGGGCATGGGTAGCTTGAGGAGCCAGCCACAGCAGGTGGACTaGGGGAGCTCAGGGGGCCAT +
Preference number: 4 (lower is better)
Translates to: QSIWCCFRALGMGSLRSQPQQVD*GSSGGH
Trigger: ATGGCCCCCTGAGCTCCCTCAGTCCACCTGCTGTGG...CTGGCTCCTCAAGCTACCCATGCCCAGCGCCCTAAAGCAGCACCAGATGCTTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR TCA 90 bp GGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCCTCCTGGAGCGCTGCTaGAGGACCTTGATCACTGCA +
Preference number: 4 (lower is better)
Translates to: GERDGAAVDGAAEMAESGLLERC*RTLITA
Trigger: TGCAGTGATCAAGGTCCTTCAGCAGCGCTCCAGGAG...GCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR TCA 90 bp GAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGAGGACACGGGCCAGGAACTTaGGGAGGAGGCATAACTGGG +
Preference number: 4 (lower is better)
Translates to: EQRLTGLLKWLRVAQGRGHGPGT*GGGITG
Trigger: CCCAGTTATGCCTCCTCCTCAAGTTCCTGGCCCGTG...TCCTCTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp GAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACATCCTGGATGAGGCGGTaGAGGACTGTCCCCGAGGAG +
Preference number: 4 (lower is better)
Translates to: ERDGAAVDGAAEMAESGTSWMRR*RTVPEE
Trigger: CTCCTCGGGGACAGTCCTGCACCGCCTCATCCAGGA...TGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp CTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCGTCTCAGTCAGGTTaGCGTAGCGCAGCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: LGKGTEQRLTGLLKWLRVASQSG*RSAAAP
Trigger: AGGAGCAGCTGCGCTACGGCAACCTGACTGAGACGC...CACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp AGTGTCTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGGGATGGCTAGCAGCGTaGGCGTCTCAGTCAGGTTGC +
Preference number: 4 (lower is better)
Translates to: SVWLGKGTEQRLTGLLKWGWLAA*ASQSGC
Trigger: GCAACCTGACTGAGACGCGCACGCTGCTAGCCATCC...CCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAGACACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp CAAAGCATCTGGTGCTGCTTTAGGGCGCTGGGCATGGGTAGCTTGAGGAGCCAGCCCCTCAGGGCCTGCTaGTGGATGGCTAGCAGCGTG +
Preference number: 4 (lower is better)
Translates to: QSIWCCFRALGMGSLRSQPLRAC*WMASSV
Trigger: CACGCTGCTAGCCATCCAGCAGCAGGCCCTGAGGGG...CTGGCTCCTCAAGCTACCCATGCCCAGCGCCCTAAAGCAGCACCAGATGCTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp ACCACAGCGTGTGGCCGAACAAAGCTGATTAGAACACAGCCCTACCTCGGGAGGTTCTCACCGCCCTGGTaGTCCTGGCCCTGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: TTACGRTKLIRTQPYLGRFSPPW*SWPWGS
Trigger: GGAGCCCCAGGGCCAGGAGCACCAGGGCGGTGAGAA...CCTCCCGAGGTAGGGCTGTGTTCTAATCAGCTTTGTTCGGCCACACGCTGTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249883.10
CDS-3UTR GCA 90 bp GACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGATCCTGACTTCAGCATaGTGGAAGTGCGGGCTGCCG +
Preference number: 4 (lower is better)
Translates to: DGAAVDGAAEMAESGTGQILTSA*WKCGLP
Trigger: CGGCAGCCCGCACTTCCAGCATGCTGAAGTCAGGAT...CTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp GGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGAGGATCCTGACTTCAGCATaGTGGAAGTGCGGGCTGCCG +
Preference number: 4 (lower is better)
Translates to: GAAVDGAAEMAESGTGQRILTSA*WKCGLP
Trigger: CGGCAGCCCGCACTTCCAGCATGCTGAAGTCAGGAT...CCTCTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp GAGTGTCTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGGAGGCACCTGGGCCTaGAGGATCCTGACTTCAGCA +
Preference number: 4 (lower is better)
Translates to: ECLAGERDGAAVDGAAEMGGTWA*RILTSA
Trigger: TGCTGAAGTCAGGATCCTGCAGGCCCAGGTGCCTCC...CATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAGACACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp GAGTGTCTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGGGCCTCCTGTGTCTTaGTTGCCAGGCGGCGATTTG +
Preference number: 4 (lower is better)
Translates to: ECLAGERDGAAVDGAAEMGPPVS*LPGGDL
Trigger: CAAATCGCCGCCTGGCAAGCAAGACACAGGAGGCCC...CATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAGACACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp CAAAGCATCTGGTGCTGCTTTAGGGCGCTGGGCATGGGTAGCTTGAGGAGCCAGGCATTGCCCAGAGCCTaGTCCAGCAGCTCGGCACGC +
Preference number: 4 (lower is better)
Translates to: QSIWCCFRALGMGSLRSQALPRA*SSSSAR
Trigger: GCGTGCCGAGCTGCTGGAGCAGGCTCTGGGCAATGC...CTGGCTCCTCAAGCTACCCATGCCCAGCGCCCTAAAGCAGCACCAGATGCTTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp GCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGAGGAGGCATAGGCCTGCTTCTTaGGCAGCTCCTCTTCGGCTC +
Preference number: 4 (lower is better)
Translates to: AAVDGAAEMAESGTGQRRHRPAS*AAPLRL
Trigger: GAGCCGAAGAGGAGCTGCGCAAGAAGCAGGCCTATG...CCTCCTCTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp AGGCAGCCGAGATCCTGGGAATCGAGCAGCTTTAACATCCACGGGCCAGGAACTCCGCTTCTCACAGGCTaGCTGCAGCTGCCCGAGCGC +
Preference number: 4 (lower is better)
Translates to: RQPRSWESSSFNIHGPGTPLLTG*LQLPER
Trigger: GCGCTCGGGCAGCTGCAGGCAGCCTGTGAGAAGCGG...AGTTCCTGGCCCGTGGATGTTAAAGCTGCTCGATTCCCAGGATCTCGGCTGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp CTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGTGCCTGTCTCTGCTGTaGACGCAGGGCCTTGAGTTC +
Preference number: 4 (lower is better)
Translates to: LAGERDGAAVDGAAEMAECLSLL*TQGLEF
Trigger: GAACTCAAGGCCCTGCGTGCACAGCAGAGACAGGCA...CTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp GAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACACTGGAGACCCACCACTaGCACTGCTACCACCTGGGG +
Preference number: 4 (lower is better)
Translates to: ERDGAAVDGAAEMAESGTLETHH*HCYHLG
Trigger: CCCCAGGTGGTAGCAGTGGCAGTGGTGGGTCTCCAG...TGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp GAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGCCCTGGGTTCCTGCTaGCGCAGCCGCGAAAACAGA +
Preference number: 4 (lower is better)
Translates to: ERDGAAVDGAAEMAESGTALGSC*RSRENR
Trigger: TCTGTTTTCGCGGCTGCGGCAGCAGGAACCCAGGGC...TGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp CAGAAAGAACTGGTACCGGGTAGGGCCACCGAAGCCCACCTGGGGGCATGGCAGCCGAGCAGGGGCGTCTaGTGTTTGTCGCTCACTAGA +
Preference number: 4 (lower is better)
Translates to: QKELVPGRATEAHLGAWQPSRGV*CLSLTR
Trigger: TCTAGTGAGCGACAAACAGCAGACGCCCCTGCTCGG...CTGCCATGCCCCCAGGTGGGCTTCGGTGGCCCTACCCGGTACCAGTTCTTTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp GACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGCTCTCTGGCTACTGCTaGACCCCAGAAGGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: DGAAVDGAAEMAESGTGQLSGYC*TPEGCQ
Trigger: CTGACAGCCTTCTGGGGTGCAGCAGTAGCCAGAGAG...CTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp GGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGAGGCTCTCTGGCTACTGCTaGACCCCAGAAGGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: GAAVDGAAEMAESGTGQRLSGYC*TPEGCQ
Trigger: CTGACAGCCTTCTGGGGTGCAGCAGTAGCCAGAGAG...CCTCTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp CTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGCTGCTCTCTGGCTACTaGTGCACCCCAGAAGGCTGT +
Preference number: 4 (lower is better)
Translates to: LAGERDGAAVDGAAEMAELLSGY*CTPEGC
Trigger: ACAGCCTTCTGGGGTGCAGCAGTAGCCAGAGAGCAG...CTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp CAGAAAGAACTGGTACCGGGTAGGGCCACCGAAGCCCACCTGGGGGCATGGCAGAGAGTCTTCTGGGGGTaGCGGTGCTCTCACAGCTCT +
Preference number: 4 (lower is better)
Translates to: QKELVPGRATEAHLGAWQRVFWG*RCSHSS
Trigger: AGAGCTGTGAGAGCACCGGCACCCCCAGAAGACTCT...CTGCCATGCCCCCAGGTGGGCTTCGGTGGCCCTACCCGGTACCAGTTCTTTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp GCAGAGGGAGCTCAGCTCCTTTCTGAGCTGTCAGTTGCTACCCCAGTAGCAGGCCTGGACAATGGCCGGTaGCACCTGGCCCCAGAGCAC +
Preference number: 4 (lower is better)
Translates to: AEGAQLLSELSVATPVAGLDNGR*HLAPEH
Trigger: GTGCTCTGGGGCCAGGTGCCACCGGCCATTGTCCAG...GCCTGCTACTGGGGTAGCAACTGACAGCTCAGAAAGGAGCTGAGCTCCCTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp CAAAGCATCTGGTGCTGCTTTAGGGCGCTGGGCATGGGTAGCTTGAGGAGCCAGGGGCCTGCTGCTGGATaGCTAGCAGCGTGCGCGTCT +
Preference number: 4 (lower is better)
Translates to: QSIWCCFRALGMGSLRSQGPAAG*LAACAS
Trigger: AGACGCGCACGCTGCTAGCCATCCAGCAGCAGGCCC...CTGGCTCCTCAAGCTACCCATGCCCAGCGCCCTAAAGCAGCACCAGATGCTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp CAAAGCATCTGGTGCTGCTTTAGGGCGCTGGGCATGGGTAGCTTGAGGAGCCAGCTCAGGGCCTGCTGCTaGATGGCTAGCAGCGTGCGC +
Preference number: 4 (lower is better)
Translates to: QSIWCCFRALGMGSLRSQLRACC*MASSVR
Trigger: GCGCACGCTGCTAGCCATCCAGCAGCAGGCCCTGAG...CTGGCTCCTCAAGCTACCCATGCCCAGCGCCCTAAAGCAGCACCAGATGCTTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp TGTCTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGTGTTCTCTGCCAGGTaGTTCTCACCGCCCTGGTGC +
Preference number: 4 (lower is better)
Translates to: CLAGERDGAAVDGAAEMAVFSAR*FSPPWC
Trigger: GCACCAGGGCGGTGAGAACCACCTGGCAGAGAACAC...AGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CCA 90 bp CTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGTGTTCTCTGCCAGGTaGTTCTCACCGCCCTGGTGC +
Preference number: 4 (lower is better)
Translates to: LGKGTEQRLTGLLKWLRVVFSAR*FSPPWC
Trigger: GCACCAGGGCGGTGAGAACCACCTGGCAGAGAACAC...CACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CCA 90 bp TGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGATGGCCTCCTCATAGGTaGGCAGCTCCTCTCCCTTGC +
Preference number: 4 (lower is better)
Translates to: WLGKGTEQRLTGLLKWLRWPPHR*AAPLPC
Trigger: GCAAGGGAGAGGAGCTGCCCACCTATGAGGAGGCCA...TCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CCA 90 bp CTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGCTGTGGGAAGCTGTaGGAGGAGCTCATGTGGCTG +
Preference number: 4 (lower is better)
Translates to: LAGERDGAAVDGAAEMAESCGKL*EELMWL
Trigger: CAGCCACATGAGCTCCTCCCACAGCTTCCCACAGCT...CTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CCA 90 bp AAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGCGGGCACGGTACCGTaGGTCAGTGACAGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: KGTEQRLTGLLKWLRVAQAGTVP*VSDSSG
Trigger: ACCACTGCTGTCACTGACCCACGGTACCGTGCCCGC...CTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CCA 90 bp AAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGAGCTCAGGGGGCCATaGCCGAGAGCAGCTGGATGT +
Preference number: 4 (lower is better)
Translates to: KGTEQRLTGLLKWLRVAQELRGP*PRAAGC
Trigger: ACATCCAGCTGCTCTCGGCCATGGCCCCCTGAGCTC...CTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CCA 90 bp AAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGCTGGTCAGGCTCTCATaGGCCTCAGAGAGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: KGTEQRLTGLLKWLRVAQLVRLS*ASESRW
Trigger: CCAGCGGCTCTCTGAGGCCCATGAGAGCCTGACCAG...CTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CCA 90 bp TGTCTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGCTTGGAGGAGGCTCTaGTCAGGCTCTCATGGGCCT +
Preference number: 4 (lower is better)
Translates to: CLAGERDGAAVDGAAEMAAWRRL*SGSHGP
Trigger: AGGCCCATGAGAGCCTGACCAGAGCCTCCTCCAAGC...AGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CCA 90 bp GCAGAGGGAGCTCAGCTCCTTTCTGAGCTGTCAGTTGCTACCCCAGTAGCAGGCCCAGGGCCTCACGCTTaGAGGAGGCTCTGGTCAGGC +
Preference number: 4 (lower is better)
Translates to: AEGAQLLSELSVATPVAGPGPHA*RRLWSG
Trigger: GCCTGACCAGAGCCTCCTCCAAGCGTGAGGCCCTGG...GCCTGCTACTGGGGTAGCAACTGACAGCTCAGAAAGGAGCTGAGCTCCCTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp GCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGAGGAGGTGGCAGCCGCATCCATaGCAAACTGCCTCATGGCAC +
Preference number: 4 (lower is better)
Translates to: AAVDGAAEMAESGTGQRRWQPHP*QTASWH
Trigger: GTGCCATGAGGCAGTTTGCCATGGATGCGGCTGCCA...CCTCCTCTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CCA 90 bp TGTCTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTCTGCTGGGTGAGGGCTaGGGGGAATGTCGGATGAGA +
Preference number: 4 (lower is better)
Translates to: CLAGERDGAAVDGAAEMALLGEG*GECRMR
Trigger: TCTCATCCGACATTCCCCCCAGCCCTCACCCAGCAG...AGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAGACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CCA 90 bp GAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGAGGATGCCAGGGTCTCTCCTaGAGCGCTGCTGAAGGACCT +
Preference number: 4 (lower is better)
Translates to: EQRLTGLLKWLRVAQGRGCQGLS*SAAEGP
Trigger: AGGTCCTTCAGCAGCGCTCCAGGAGAGACCCTGGCA...TCCTCTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CCA 90 bp GAGTGTCTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGAGCCGCGAAAACAGATaGCACCGACTTGGCAGGCCG +
Preference number: 4 (lower is better)
Translates to: ECLAGERDGAAVDGAAEMSRENR*HRLGRP
Trigger: CGGCCTGCCAAGTCGGTGCCATCTGTTTTCGCGGCT...CATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAGACACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CCA 90 bp CAAAGCATCTGGTGCTGCTTTAGGGCGCTGGGCATGGGTAGCTTGAGGAGCCAGGGTGGAGGTGCTGTCTaGGGGGCCCTCAGTCTGGGT +
Preference number: 4 (lower is better)
Translates to: QSIWCCFRALGMGSLRSQGGGAV*GALSLG
Trigger: ACCCAGACTGAGGGCCCCCCAGACAGCACCTCCACC...CTGGCTCCTCAAGCTACCCATGCCCAGCGCCCTAAAGCAGCACCAGATGCTTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp CTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGAGAGGCTGCTCTCTaGCTACTGCTGCACCCCAGA +
Preference number: 4 (lower is better)
Translates to: LAGERDGAAVDGAAEMAEREAAL*LLLHPR
Trigger: TCTGGGGTGCAGCAGTAGCCAGAGAGCAGCCTCTCT...CTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CCA 90 bp GACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGAGAGAGGCTGCTCTCTaGCTACTGCTGCACCCCAGA +
Preference number: 4 (lower is better)
Translates to: DGAAVDGAAEMAESGTGQREAAL*LLLHPR
Trigger: TCTGGGGTGCAGCAGTAGCCAGAGAGCAGCCTCTCT...CTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CCA 90 bp GAGTGTCTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGACGGGGCTGCTGAAATaGCTGAGAGTGGCACAGGGC +
Preference number: 4 (lower is better)
Translates to: ECLAGERDGAAVDGAAEMTGLLK*LRVAQG
Trigger: GCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGT...CATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAGACACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CCA 90 bp GCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGAGGAGGAGAAGCAGAGTCTTCTaGGGGTGCCGGTGCTCTCAC +
Preference number: 4 (lower is better)
Translates to: AAVDGAAEMAESGTGQRRRSRVF*GCRCSH
Trigger: GTGAGAGCACCGGCACCCCCAGAAGACTCTGCTTCT...CCTCCTCTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp GGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCAGAAGCAGAGTCTTCTaGGGGTGCCGGTGCTCTCAC +
Preference number: 4 (lower is better)
Translates to: GERDGAAVDGAAEMAESGRSRVF*GCRCSH
Trigger: GTGAGAGCACCGGCACCCCCAGAAGACTCTGCTTCT...GCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp CTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGTGCCTGACTGACAACTaGCAGGGCAGAGGGAGCTCA +
Preference number: 4 (lower is better)
Translates to: LAGERDGAAVDGAAEMAECLTDN*QGRGSS
Trigger: TGAGCTCCCTCTGCCCTGCCAGTTGTCAGTCAGGCA...CTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp GCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGAGGAGGTGCCTGACTGACAACTaGCAGGGCAGAGGGAGCTCA +
Preference number: 4 (lower is better)
Translates to: AAVDGAAEMAESGTGQRRCLTDN*QGRGSS
Trigger: TGAGCTCCCTCTGCCCTGCCAGTTGTCAGTCAGGCA...CCTCCTCTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp CAGAAAGAACTGGTACCGGGTAGGGCCACCGAAGCCCACCTGGGGGCATGGCAGGTGGTGGGGGTCCCGTaGGCATTTATAGGGCTCAAG +
Preference number: 4 (lower is better)
Translates to: QKELVPGRATEAHLGAWQVVGVP*AFIGLK
Trigger: CTTGAGCCCTATAAATGCCCACGGGACCCCCACCAC...CTGCCATGCCCCCAGGTGGGCTTCGGTGGCCCTACCCGGTACCAGTTCTTTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp GCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGAGGAGGTCAAGAGGCTGGTGGTaGGGGTCCCGTGGGCATTTA +
Preference number: 4 (lower is better)
Translates to: AAVDGAAEMAESGTGQRRSRGWW*GSRGHL
Trigger: TAAATGCCCACGGGACCCCCACCACCAGCCTCTTGA...CCTCCTCTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp TGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAACTTCAAGAGGCTGGTaGTGGGGGTCCCGTGGGCAT +
Preference number: 4 (lower is better)
Translates to: WLGKGTEQRLTGLLKWLRTSRGW*WGSRGH
Trigger: ATGCCCACGGGACCCCCACCACCAGCCTCTTGAAGT...TCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp GGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCCAGGGACAGGAGCTGTaGAGCCACTTCAAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: GERDGAAVDGAAEMAESGQGQEL*SHFKRL
Trigger: CAGCCTCTTGAAGTGGCTCCACAGCTCCTGTCCCTG...GCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR TCA 90 bp CTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGGGCCTGCAGGATCCTaGCTTCAGCATGCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: LGKGTEQRLTGLLKWLRVGPAGS*LQHAGS
Trigger: ACTTCCAGCATGCTGAAGTCAGGATCCTGCAGGCCC...CACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR TCA 90 bp GAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGAGGAGGGCCTGCAGGATCCTaGCTTCAGCATGCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: EQRLTGLLKWLRVAQGRGGPAGS*LQHAGS
Trigger: ACTTCCAGCATGCTGAAGTCAGGATCCTGCAGGCCC...TCCTCTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR TCA 90 bp CAAGAGGCTGGTGGTGGGGGTCCCGTGGGCATTTATAGGGCTCAAGATAGAGGAACAGTCGCAGGGCGCTaGGCTCTGGAGACCCACCAC +
Preference number: 4 (lower is better)
Translates to: QEAGGGGPVGIYRAQDRGTVAGR*ALETHH
Trigger: GTGGTGGGTCTCCAGAGCTCAGCGCCCTGCGACTGT...TCCTCTATCTTGAGCCCTATAAATGCCCACGGGACCCCCACCACCAGCCTCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR TCA 90 bp AAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGCTCTCGCAGTTGTTCTaGCAGTCGCAGGGCGCTGAG +
Preference number: 4 (lower is better)
Translates to: KGTEQRLTGLLKWLRVAQLSQLF*QSQGAE
Trigger: CTCAGCGCCCTGCGACTGTCAGAACAACTGCGAGAG...CTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR TCA 90 bp AGTGTCTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGCTTTCCATCTCCTaGTGCCTGTGGCCACCAGTG +
Preference number: 4 (lower is better)
Translates to: SVWLGKGTEQRLTGLLKWLLSIS*CLWPPV
Trigger: CACTGGTGGCCACAGGCATCAGGAGATGGAAAGCAG...CCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAGACACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR TCA 90 bp CAAGAGGCTGGTGGTGGGGGTCCCGTGGGCATTTATAGGGCTCAAGATAGAGGACCCTCCCTGCCTGACTaGCAACTGGCAGGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: QEAGGGGPVGIYRAQDRGPSLPD*QLAGQR
Trigger: CCTCTGCCCTGCCAGTTGTCAGTCAGGCAGGGAGGG...TCCTCTATCTTGAGCCCTATAAATGCCCACGGGACCCCCACCACCAGCCTCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR TCA 90 bp CAAAGCATCTGGTGCTGCTTTAGGGCGCTGGGCATGGGTAGCTTGAGGAGCCAGCACTCCCTCCCTGCCTaGCTGACAACTGGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: QSIWCCFRALGMGSLRSQHSLPA*LTTGRA
Trigger: TGCCCTGCCAGTTGTCAGTCAGGCAGGGAGGGAGTG...CTGGCTCCTCAAGCTACCCATGCCCAGCGCCCTAAAGCAGCACCAGATGCTTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR TCA 90 bp CTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGCTGGGCACTGTTTTGTaGTGGGGGCTCCATTCAGAG +
Preference number: 4 (lower is better)
Translates to: LAGERDGAAVDGAAEMAELGTVL*WGLHSE
Trigger: CTCTGAATGGAGCCCCCATCACAAAACAGTGCCCAG...CTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp GAGCTGTCAGTTGCTACCCCAGTAGCAGGCCTTGGGCAAGAAGTCAAGGCTGAATTCTCACCGCCCTGGTaGTCCTGGCCCTGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: ELSVATPVAGLGQEVKAEFSPPW*SWPWGS
Trigger: GGAGCCCCAGGGCCAGGAGCACCAGGGCGGTGAGAA...TTCAGCCTTGACTTCTTGCCCAAGGCCTGCTACTGGGGTAGCAACTGACAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp GAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGAGGAGTAGAGGGTGTTCTCTaGCAGGTGGTTCTCACCGCC +
Preference number: 4 (lower is better)
Translates to: EQRLTGLLKWLRVAQGRGVEGVL*QVVLTA
Trigger: GGCGGTGAGAACCACCTGGCAGAGAACACCCTCTAC...TCCTCTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp GGGGTCCCGTGGGCATTTATAGGGCTCAAGATAGAGGAAAAGGCAGCCGAGATCTCAGCATGCTGGAAGTaGGGGCTGCCGCGGGCACGG +
Preference number: 4 (lower is better)
Translates to: GVPWAFIGLKIEEKAAEISACWK*GLPRAR
Trigger: CCGTGCCCGCGGCAGCCCGCACTTCCAGCATGCTGA...GATCTCGGCTGCCTTTTCCTCTATCTTGAGCCCTATAAATGCCCACGGGACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp GAGTGTCTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGATCCTGACTTCAGCATaGTGGAAGTGCGGGCTGCCG +
Preference number: 4 (lower is better)
Translates to: ECLAGERDGAAVDGAAEMILTSA*WKCGLP
Trigger: CGGCAGCCCGCACTTCCAGCATGCTGAAGTCAGGAT...CATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAGACACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp GAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGAGGCACCTGGGCCTaGAGGATCCTGACTTCAGCA +
Preference number: 4 (lower is better)
Translates to: ERDGAAVDGAAEMAESGTGGTWA*RILTSA
Trigger: TGCTGAAGTCAGGATCCTGCAGGCCCAGGTGCCTCC...TGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp GACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGCTCCTGTGTCTTGCTTaGCAGGCGGCGATTTGCAGA +
Preference number: 4 (lower is better)
Translates to: DGAAVDGAAEMAESGTGQLLCLA*QAAICR
Trigger: TCTGCAAATCGCCGCCTGGCAAGCAAGACACAGGAG...CTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp GGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCCTCCTGTGTCTTGCTTaGCAGGCGGCGATTTGCAGA +
Preference number: 4 (lower is better)
Translates to: GERDGAAVDGAAEMAESGLLCLA*QAAICR
Trigger: TCTGCAAATCGCCGCCTGGCAAGCAAGACACAGGAG...GCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp CAAGAGGCTGGTGGTGGGGGTCCCGTGGGCATTTATAGGGCTCAAGATAGAGGAGGCGCCGCGCAGCAGTaGCATCTCTCGCTCCAGCTT +
Preference number: 4 (lower is better)
Translates to: QEAGGGGPVGIYRAQDRGGAAQQ*HLSLQL
Trigger: AAGCTGGAGCGAGAGATGGCACTGCTGCGCGGCGCC...TCCTCTATCTTGAGCCCTATAAATGCCCACGGGACCCCCACCACCAGCCTCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp AGTGTCTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCATAGGCCTGCTTCTTaGGCAGCTCCTCTTCGGCTC +
Preference number: 4 (lower is better)
Translates to: SVWLGKGTEQRLTGLLKWHRPAS*AAPLRL
Trigger: GAGCCGAAGAGGAGCTGCGCAAGAAGCAGGCCTATG...CCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAGACACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp TGTCTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTCATAGGCCTGCTTCTTaGGCAGCTCCTCTTCGGCTC +
Preference number: 4 (lower is better)
Translates to: CLAGERDGAAVDGAAEMAHRPAS*AAPLRL
Trigger: GAGCCGAAGAGGAGCTGCGCAAGAAGCAGGCCTATG...AGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp GAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAAGACGCAGCTCCAGCTaGTCCCGCTTCTCACAGGCT +
Preference number: 4 (lower is better)
Translates to: ERDGAAVDGAAEMAESGTRRSSS*SRFSQA
Trigger: AGCCTGTGAGAAGCGGGAGCAGCTGGAGCTGCGTCT...TGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp GACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGGCATCCATGGCAAACTaGCTCATGGCACGTTCCTCC +
Preference number: 4 (lower is better)
Translates to: DGAAVDGAAEMAESGTGQASMAN*LMARSS
Trigger: GGAGGAACGTGCCATGAGGCAGTTTGCCATGGATGC...CTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp TTTAGGGCGCTGGGCATGGGTAGCTTGAGGAGCCAGCCTCCTGGGCACTGTTTTAGCCCTGGATGGCCTTaGCAGGGTCTCTCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: FRALGMGSLRSQPPGHCFSPGWP*QGLSWS
Trigger: GCTCCAGGAGAGACCCTGGCAAGGCCATCCAGGGCT...AAAACAGTGCCCAGGAGGCTGGCTCCTCAAGCTACCCATGCCCAGCGCCCTAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp ACCACAGCGTGTGGCCGAACAAAGCTGATTAGAACACAGCCCTACCTCGGGAGGCCAGCCCTGGGTTCCTaGTGCCGCAGCCGCGAAAAC +
Preference number: 4 (lower is better)
Translates to: TTACGRTKLIRTQPYLGRPALGS*CRSREN
Trigger: GTTTTCGCGGCTGCGGCAGCAGGAACCCAGGGCTGG...CCTCCCGAGGTAGGGCTGTGTTCTAATCAGCTTTGTTCGGCCACACGCTGTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249883.10
CDS-3UTR GCA 90 bp AGTGTCTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCCGAGCAGGGGCGTCTaGTGTTTGTCGCTCACTAGA +
Preference number: 4 (lower is better)
Translates to: SVWLGKGTEQRLTGLLKWPSRGV*CLSLTR
Trigger: TCTAGTGAGCGACAAACAGCAGACGCCCCTGCTCGG...CCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAGACACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp GAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGAGGACTGCTCTCTGGCTACTaGTGCACCCCAGAAGGCTGT +
Preference number: 4 (lower is better)
Translates to: EQRLTGLLKWLRVAQGRGLLSGY*CTPEGC
Trigger: ACAGCCTTCTGGGGTGCAGCAGTAGCCAGAGAGCAG...TCCTCTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp TGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGATGGCTCCTCTGTGGGTaGTCTGTCTGTAGTCAGCCG +
Preference number: 4 (lower is better)
Translates to: WLGKGTEQRLTGLLKWLRWLLCG*SVCSQP
Trigger: CGGCTGACTACAGACAGAGCACCCACAGAGGAGCCA...TCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp GAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGAGGATGGCTCCTCTGTGGGTaGTCTGTCTGTAGTCAGCCG +
Preference number: 4 (lower is better)
Translates to: EQRLTGLLKWLRVAQGRGWLLCG*SVCSQP
Trigger: CGGCTGACTACAGACAGAGCACCCACAGAGGAGCCA...TCCTCTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CCA 90 bp CAAAGCATCTGGTGCTGCTTTAGGGCGCTGGGCATGGGTAGCTTGAGGAGCCAGGCTCCTCTCCCTTGCTaGGCTGTGGGCATAGCCGGT +
Preference number: 4 (lower is better)
Translates to: QSIWCCFRALGMGSLRSQAPLPC*AVGIAG
Trigger: ACCGGCTATGCCCACAGCCCAGCAAGGGAGAGGAGC...CTGGCTCCTCAAGCTACCCATGCCCAGCGCCCTAAAGCAGCACCAGATGCTTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp GAGTGTCTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGACTGCGAGTGGGCTTTaGCCTCCTCATAGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: ECLAGERDGAAVDGAAEMTASGL*PPHRWA
Trigger: TGCCCACCTATGAGGAGGCCAAAGCCCACTCGCAGT...CATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAGACACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CCA 90 bp GGAGACACATCGGAACCTGCAGGCCTCAGTCTTCTGTTCCACAAGAAAGGGAATTGGGAGGAGCTCATGTaGCTGGGGGCCCGGGCGCCG +
Preference number: 4 (lower is better)
Translates to: GDTSEPAGLSLLFHKKGNWEELM*LGARAP
Trigger: CGGCGCCCGGGCCCCCAGCCACATGAGCTCCTCCCA...ATTCCCTTTCTTGTGGAACAGAAGACTGAGGCCTGCAGGTTCCGATGTGTCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp GGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGAGGTACTGCTGCTGCTGTTaGAGGAACACAGGAGGCACC +
Preference number: 4 (lower is better)
Translates to: GAAVDGAAEMAESGTGQRYCCCC*RNTGGT
Trigger: GGTGCCTCCTGTGTTCCTCCAACAGCAGCAGCAGTA...CCTCTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CCA 90 bp GGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCTACTGCTGCTGCTGTTaGAGGAACACAGGAGGCACC +
Preference number: 4 (lower is better)
Translates to: GERDGAAVDGAAEMAESGYCCCC*RNTGGT
Trigger: GGTGCCTCCTGTGTTCCTCCAACAGCAGCAGCAGTA...GCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CCA 90 bp GCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGAGGAGGGCCTCAGAGAGCCGCTaGATTTCGCTTTCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: AAVDGAAEMAESGTGQRRASESR*ISLSSF
Trigger: GAAGCTGGAAAGCGAAATCCAGCGGCTCTCTGAGGC...CCTCCTCTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CCA 90 bp GCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGAGGAGGTCTGAGCAAGCAGCTTaGCCACCATGTCCTGACTGC +
Preference number: 4 (lower is better)
Translates to: AAVDGAAEMAESGTGQRRSEQAA*PPCPDC
Trigger: GCAGTCAGGACATGGTGGCCAAGCTGCTTGCTCAGA...CCTCCTCTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CCA 90 bp CTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGTGGCAGCCGCATCCATaGCAAACTGCCTCATGGCAC +
Preference number: 4 (lower is better)
Translates to: LGKGTEQRLTGLLKWLRVWQPHP*QTASWH
Trigger: GTGCCATGAGGCAGTTTGCCATGGATGCGGCTGCCA...CACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CCA 90 bp TGTCTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTTGGCAGCCGCATCCATaGCAAACTGCCTCATGGCAC +
Preference number: 4 (lower is better)
Translates to: CLAGERDGAAVDGAAEMAWQPHP*QTASWH
Trigger: GTGCCATGAGGCAGTTTGCCATGGATGCGGCTGCCA...AGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CCA 90 bp GAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACACTGCTGGGTGAGGGCTaGGGGGAATGTCGGATGAGA +
Preference number: 4 (lower is better)
Translates to: ERDGAAVDGAAEMAESGTLLGEG*GECRMR
Trigger: TCTCATCCGACATTCCCCCCAGCCCTCACCCAGCAG...TGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CCA 90 bp AAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGACGGGGCTGCTGAAATaGCTGAGAGTGGCACAGGGC +
Preference number: 4 (lower is better)
Translates to: KGTEQRLTGLLKWLRVAQTGLLK*LRVAQG
Trigger: GCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGT...CTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CCA 90 bp GACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGACGGGCAGCCGTCCGTaGAAATTAGTTCCCCAAACC +
Preference number: 4 (lower is better)
Translates to: DGAAVDGAAEMAESGTGQTGSRP*KLVPQT
Trigger: GGTTTGGGGAACTAATTTCCACGGACGGCTGCCCGT...CTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp GAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGGAGCACAGCCCATaGAGACACATCGGAACCTGC +
Preference number: 4 (lower is better)
Translates to: ERDGAAVDGAAEMAESGTGEHSP*RHIGTC
Trigger: GCAGGTTCCGATGTGTCTCCATGGGCTGTGCTCCCC...TGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp TGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGTGGGGGTCCCGTaGGCATTTATAGGGCTCAAG +
Preference number: 4 (lower is better)
Translates to: WLGKGTEQRLTGLLKWLRVVGVP*AFIGLK
Trigger: CTTGAGCCCTATAAATGCCCACGGGACCCCCACCAC...TCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp TGTCTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTCAGGGACAGGAGCTGTaGAGCCACTTCAAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: CLAGERDGAAVDGAAEMAQGQEL*SHFKRL
Trigger: CAGCCTCTTGAAGTGGCTCCACAGCTCCTGTCCCTG...AGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR TCA 90 bp AAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGTACCGTGGGTCAGTaGCAGCAGTGGTGGTCTCAT +
Preference number: 4 (lower is better)
Translates to: KGTEQRLTGLLKWLRVAQGTVGQ*QQWWSH
Trigger: ATGAGACCACCACTGCTGTCACTGACCCACGGTACC...CTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR TCA 90 bp GAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGTACCGTGGGTCAGTaGCAGCAGTGGTGGTCTCAT +
Preference number: 4 (lower is better)
Translates to: ERDGAAVDGAAEMAESGTGTVGQ*QQWWSH
Trigger: ATGAGACCACCACTGCTGTCACTGACCCACGGTACC...TGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR TCA 90 bp GACCAAACTGACAGGATGTTCCAGGGACAGGAGCTGTGGAGCCACTTCAAGAGGGTGCACGCAGGGCCTTaGGTTCCTGCTCCAGGCGAG +
Preference number: 4 (lower is better)
Translates to: DQTDRMFQGQELWSHFKRVHAGP*VPAPGE
Trigger: CTCGCCTGGAGCAGGAACTCAAGGCCCTGCGTGCAC...CCTCTTGAAGTGGCTCCACAGCTCCTGTCCCTGGAACATCCTGTCAGTTTGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR TCA 90 bp GACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGGCTGCTGAAGGACCTTaGTCACTGCATCCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: DGAAVDGAAEMAESGTGQAAEGP*SLHPSP
Trigger: TGGAGAAGGATGCAGTGATCAAGGTCCTTCAGCAGC...CTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR TCA 90 bp CTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAATGGCTCAGAGTCCTaGAGCACCACCTCCTTCAGA +
Preference number: 4 (lower is better)
Translates to: LAGERDGAAVDGAAEMAENGSES*STTSFR
Trigger: TCTGAAGGAGGTGGTGCTTCAGGACTCTGAGCCATT...CTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR TCA 90 bp GCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGAGGAGGAATGGCTCAGAGTCCTaGAGCACCACCTCCTTCAGA +
Preference number: 4 (lower is better)
Translates to: AAVDGAAEMAESGTGQRRNGSES*STTSFR
Trigger: TCTGAAGGAGGTGGTGCTTCAGGACTCTGAGCCATT...CCTCCTCTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR TCA 90 bp GCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGAGGAGGGATGGTCAATGGGAATaGGTGTCTGGCTGGGGAAAG +
Preference number: 4 (lower is better)
Translates to: AAVDGAAEMAESGTGQRRDGQWE*VSGWGK
Trigger: CTTTCCCCAGCCAGACACTCATTCCCATTGACCATC...CCTCCTCTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR TCA 90 bp GGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCGATGGTCAATGGGAATaGGTGTCTGGCTGGGGAAAG +
Preference number: 4 (lower is better)
Translates to: GERDGAAVDGAAEMAESGDGQWE*VSGWGK
Trigger: CTTTCCCCAGCCAGACACTCATTCCCATTGACCATC...GCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR TCA 90 bp CAGAAAGAACTGGTACCGGGTAGGGCCACCGAAGCCCACCTGGGGGCATGGCAGGATGGTCAATGGGAATaGGTGTCTGGCTGGGGAAAG +
Preference number: 4 (lower is better)
Translates to: QKELVPGRATEAHLGAWQDGQWE*VSGWGK
Trigger: CTTTCCCCAGCCAGACACTCATTCCCATTGACCATC...CTGCCATGCCCCCAGGTGGGCTTCGGTGGCCCTACCCGGTACCAGTTCTTTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp GACCAAACTGACAGGATGTTCCAGGGACAGGAGCTGTGGAGCCACTTCAAGAGGCCCCTCAGGGCCTGCTaGTGGATGGCTAGCAGCGTG +
Preference number: 4 (lower is better)
Translates to: DQTDRMFQGQELWSHFKRPLRAC*WMASSV
Trigger: CACGCTGCTAGCCATCCAGCAGCAGGCCCTGAGGGG...CCTCTTGAAGTGGCTCCACAGCTCCTGTCCCTGGAACATCCTGTCAGTTTGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp GAGCTGTCAGTTGCTACCCCAGTAGCAGGCCTTGGGCAAGAAGTCAAGGCTGAACCACCCCTCAGGGCCTaGTGCTGGATGGCTAGCAGC +
Preference number: 4 (lower is better)
Translates to: ELSVATPVAGLGQEVKAEPPLRA*CWMASS
Trigger: GCTGCTAGCCATCCAGCAGCAGGCCCTGAGGGGTGG...TTCAGCCTTGACTTCTTGCCCAAGGCCTGCTACTGGGGTAGCAACTGACAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp CCTCCTGGGCACTGTTTTGTGATGGGGGCTCCATTCAGAGGACTATTTGACTCTTGGCCCTGGGGCTCCTaGCTGGTGGCCTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: PPGHCFVMGAPFRGLFDSWPWGS*LVACCS
Trigger: GCTGCAGCAGGCCACCAGGCAGGAGCCCCAGGGCCA...AGAGTCAAATAGTCCTCTGAATGGAGCCCCCATCACAAAACAGTGCCCAGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp GAGAACAATATGGCTGACTTGATTAGTGAACCAGTCCACCTGGTGTCCACGGGCGAGCGCACGTGCCCATaGCTCAGCTCCCGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: ENNMADLISEPVHLVSTGERTCP*LSSRRA
Trigger: GGCCCTGCGGGAGCTGAGGCATGGGCACGTGCGCTC...GCCCGTGGACACCAGGTGGACTGGTTCACTAATCAAGTCAGCCATATTGTTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp ACAAGACATCTCCAGTTTCTCAGAAAGAACTGGTACCGGGTAGGGCCACCGAAGGCTGGAAGTGCGGGCTaGCGCGGGCACGGTACCGTG +
Preference number: 4 (lower is better)
Translates to: TRHLQFLRKNWYRVGPPKAGSAG*RGHGTV
Trigger: CACGGTACCGTGCCCGCGGCAGCCCGCACTTCCAGC...CTTCGGTGGCCCTACCCGGTACCAGTTCTTTCTGAGAAACTGGAGATGTCTTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp AGTGTCTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCGCTCATTGTCTCTCTaGAGCCTGGCATTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: SVWLGKGTEQRLTGLLKWRSLSL*SLAFSL
Trigger: GAGGGAGAATGCCAGGCTGCAGAGAGACAATGAGCG...CCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAGACACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp CTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGCGCTCATTGTCTCTCTaGAGCCTGGCATTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: LGKGTEQRLTGLLKWLRVRSLSL*SLAFSL
Trigger: GAGGGAGAATGCCAGGCTGCAGAGAGACAATGAGCG...CACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp CAGCCTCCTGGGCACTGTTTTGTGATGGGGGCTCCATTCAGAGGACTATTTGACCCCGGCCCTGCGCATTaGCCAGAGCCTGCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: QPPGHCFVMGAPFRGLFDPGPAH*PEPAPA
Trigger: TGCTGGAGCAGGCTCTGGGCAATGCGCAGGGCCGGG...GTCAAATAGTCCTCTGAATGGAGCCCCCATCACAAAACAGTGCCCAGGAGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp GGAGACACATCGGAACCTGCAGGCCTCAGTCTTCTGTTCCACAAGAAAGGGAATCGAGCTGCCCGGCCCTaGGCATTGCCCAGAGCCTGC +
Preference number: 4 (lower is better)
Translates to: GDTSEPAGLSLLFHKKGNRAARP*ALPRAC
Trigger: GCAGGCTCTGGGCAATGCGCAGGGCCGGGCAGCTCG...ATTCCCTTTCTTGTGGAACAGAAGACTGAGGCCTGCAGGTTCCGATGTGTCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp ACAAGACATCTCCAGTTTCTCAGAAAGAACTGGTACCGGGTAGGGCCACCGAAGCGAGCTGCCCGGCCCTaGGCATTGCCCAGAGCCTGC +
Preference number: 4 (lower is better)
Translates to: TRHLQFLRKNWYRVGPPKRAARP*ALPRAC
Trigger: GCAGGCTCTGGGCAATGCGCAGGGCCGGGCAGCTCG...CTTCGGTGGCCCTACCCGGTACCAGTTCTTTCTGAGAAACTGGAGATGTCTTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp GACCAAACTGACAGGATGTTCCAGGGACAGGAGCTGTGGAGCCACTTCAAGAGGAGCTGCCCGAGCGCCTaGTGCAGCCGCTCCACTTTC +
Preference number: 4 (lower is better)
Translates to: DQTDRMFQGQELWSHFKRSCPSA*CSRSTF
Trigger: GAAAGTGGAGCGGCTGCAGCAGGCGCTCGGGCAGCT...CCTCTTGAAGTGGCTCCACAGCTCCTGTCCCTGGAACATCCTGTCAGTTTGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp GAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGAGGAGCATCCATGGCAAACTaGCTCATGGCACGTTCCTCC +
Preference number: 4 (lower is better)
Translates to: EQRLTGLLKWLRVAQGRGASMAN*LMARSS
Trigger: GGAGGAACGTGCCATGAGGCAGTTTGCCATGGATGC...TCCTCTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp ACCACAGCGTGTGGCCGAACAAAGCTGATTAGAACACAGCCCTACCTCGGGAGGAGCCCTGGATGGCCTTaGCAGGGTCTCTCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: TTACGRTKLIRTQPYLGRSPGWP*QGLSWS
Trigger: GCTCCAGGAGAGACCCTGGCAAGGCCATCCAGGGCT...CCTCCCGAGGTAGGGCTGTGTTCTAATCAGCTTTGTTCGGCCACACGCTGTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249883.10
CDS-3UTR GCA 90 bp GAGCTGTCAGTTGCTACCCCAGTAGCAGGCCTTGGGCAAGAAGTCAAGGCTGAACCAGCCCTGGGTTCCTaGTGCCGCAGCCGCGAAAAC +
Preference number: 4 (lower is better)
Translates to: ELSVATPVAGLGQEVKAEPALGS*CRSREN
Trigger: GTTTTCGCGGCTGCGGCAGCAGGAACCCAGGGCTGG...TTCAGCCTTGACTTCTTGCCCAAGGCCTGCTACTGGGGTAGCAACTGACAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp TTTAGGGCGCTGGGCATGGGTAGCTTGAGGAGCCAGCCTCCTGGGCACTGTTTTGGGTGCTCCCATCTCTaGTCCCGTGTTTGGCATGGG +
Preference number: 4 (lower is better)
Translates to: FRALGMGSLRSQPPGHCFGCSHL*SRVWHG
Trigger: CCCATGCCAAACACGGGAGCAGAGATGGGAGCACCC...AAAACAGTGCCCAGGAGGCTGGCTCCTCAAGCTACCCATGCCCAGCGCCCTAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp ACCACAGCGTGTGGCCGAACAAAGCTGATTAGAACACAGCCCTACCTCGGGAGGGGCCCTCAGTCTGGGTaGTCCCATCTCTGCTCCCGT +
Preference number: 4 (lower is better)
Translates to: TTACGRTKLIRTQPYLGRGPQSG*SHLCSR
Trigger: ACGGGAGCAGAGATGGGAGCACCCAGACTGAGGGCC...CCTCCCGAGGTAGGGCTGTGTTCTAATCAGCTTTGTTCGGCCACACGCTGTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249883.10
CDS-3UTR GCA 90 bp GAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGAGGATTCCAAAGCATCTGGTaGTGCTTTAGGGCGCTGGGC +
Preference number: 4 (lower is better)
Translates to: EQRLTGLLKWLRVAQGRGFQSIW*CFRALG
Trigger: GCCCAGCGCCCTAAAGCAGCACCAGATGCTTTGGAA...TCCTCTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp CAAAGCATCTGGTGCTGCTTTAGGGCGCTGGGCATGGGTAGCTTGAGGAGCCAGTTGCACACAGCTGCCTaGACAATGGCCGGTGGCACC +
Preference number: 4 (lower is better)
Translates to: QSIWCCFRALGMGSLRSQLHTAA*TMAGGT
Trigger: GGTGCCACCGGCCATTGTCCAGGCAGCTGTGTGCAA...CTGGCTCCTCAAGCTACCCATGCCCAGCGCCCTAAAGCAGCACCAGATGCTTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp GAGCTGTCAGTTGCTACCCCAGTAGCAGGCCTTGGGCAAGAAGTCAAGGCTGAACTCAGGGCCTGCTGCTaGATGGCTAGCAGCGTGCGC +
Preference number: 4 (lower is better)
Translates to: ELSVATPVAGLGQEVKAELRACC*MASSVR
Trigger: GCGCACGCTGCTAGCCATCCAGCAGCAGGCCCTGAG...TTCAGCCTTGACTTCTTGCCCAAGGCCTGCTACTGGGGTAGCAACTGACAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp CCTCCTGGGCACTGTTTTGTGATGGGGGCTCCATTCAGAGGACTATTTGACTCTTCGGTCCCCCGCATGTaGCCGGGTCCCTGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: PPGHCFVMGAPFRGLFDSSVPRM*PGPCLL
Trigger: CAGCAGGCAGGGACCCGGCCACATGCGGGGGACCGA...AGAGTCAAATAGTCCTCTGAATGGAGCCCCCATCACAAAACAGTGCCCAGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp GGAGACACATCGGAACCTGCAGGCCTCAGTCTTCTGTTCCACAAGAAAGGGAATGGGCACTGCCCGAGGTaGCTGAGGAGGCCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: GDTSEPAGLSLLFHKKGNGHCPR*LRRPGH
Trigger: GTGCCCAGGCCTCCTCAGCCACCTCGGGCAGTGCCC...ATTCCCTTTCTTGTGGAACAGAAGACTGAGGCCTGCAGGTTCCGATGTGTCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp CTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCCTCAGAGAGCCGCTaGATTTCGCTTTCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: LGKGTEQRLTGLLKWLRVASESR*ISLSSF
Trigger: GAAGCTGGAAAGCGAAATCCAGCGGCTCTCTGAGGC...CACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CCA 90 bp AGGCAGCCGAGATCCTGGGAATCGAGCAGCTTTAACATCCACGGGCCAGGAACTCTGGTCAGGCTCTCATaGGCCTCAGAGAGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: RQPRSWESSSFNIHGPGTLVRLS*ASESRW
Trigger: CCAGCGGCTCTCTGAGGCCCATGAGAGCCTGACCAG...AGTTCCTGGCCCGTGGATGTTAAAGCTGCTCGATTCCCAGGATCTCGGCTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp GGGGTCCCGTGGGCATTTATAGGGCTCAAGATAGAGGAAAAGGCAGCCGAGATCCCAGGGCCTCACGCTTaGAGGAGGCTCTGGTCAGGC +
Preference number: 4 (lower is better)
Translates to: GVPWAFIGLKIEEKAAEIPGPHA*RRLWSG
Trigger: GCCTGACCAGAGCCTCCTCCAAGCGTGAGGCCCTGG...GATCTCGGCTGCCTTTTCCTCTATCTTGAGCCCTATAAATGCCCACGGGACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp TGTCTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTCCATCTTGTTCCGCATaGTCTTCTCCAGGGCCTCAC +
Preference number: 4 (lower is better)
Translates to: CLAGERDGAAVDGAAEMAPSCSA*SSPGPH
Trigger: GTGAGGCCCTGGAGAAGACCATGCGGAACAAGATGG...AGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CCA 90 bp CTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGTCTGAGCAAGCAGCTTaGCCACCATGTCCTGACTGC +
Preference number: 4 (lower is better)
Translates to: LGKGTEQRLTGLLKWLRVSEQAA*PPCPDC
Trigger: GCAGTCAGGACATGGTGGCCAAGCTGCTTGCTCAGA...CACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CCA 90 bp GCAGAGGGAGCTCAGCTCCTTTCTGAGCTGTCAGTTGCTACCCCAGTAGCAGGCTGCCAGGGTCTCTCCTaGAGCGCTGCTGAAGGACCT +
Preference number: 4 (lower is better)
Translates to: AEGAQLLSELSVATPVAGCQGLS*SAAEGP
Trigger: AGGTCCTTCAGCAGCGCTCCAGGAGAGACCCTGGCA...GCCTGCTACTGGGGTAGCAACTGACAGCTCAGAAAGGAGCTGAGCTCCCTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp CAAAGCATCTGGTGCTGCTTTAGGGCGCTGGGCATGGGTAGCTTGAGGAGCCAGTGCCAGGGTCTCTCCTaGAGCGCTGCTGAAGGACCT +
Preference number: 4 (lower is better)
Translates to: QSIWCCFRALGMGSLRSQCQGLS*SAAEGP
Trigger: AGGTCCTTCAGCAGCGCTCCAGGAGAGACCCTGGCA...CTGGCTCCTCAAGCTACCCATGCCCAGCGCCCTAAAGCAGCACCAGATGCTTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp CAAAGCATCTGGTGCTGCTTTAGGGCGCTGGGCATGGGTAGCTTGAGGAGCCAGACGGGGCTGCTGAAATaGCTGAGAGTGGCACAGGGC +
Preference number: 4 (lower is better)
Translates to: QSIWCCFRALGMGSLRSQTGLLK*LRVAQG
Trigger: GCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGT...CTGGCTCCTCAAGCTACCCATGCCCAGCGCCCTAAAGCAGCACCAGATGCTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp TGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAATGGGAATGAGTGTCTaGCTGGGGAAAGGGACGGAG +
Preference number: 4 (lower is better)
Translates to: WLGKGTEQRLTGLLKWLRMGMSV*LGKGTE
Trigger: CTCCGTCCCTTTCCCCAGCCAGACACTCATTCCCAT...TCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CCA 90 bp GAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGAGGAATGGGAATGAGTGTCTaGCTGGGGAAAGGGACGGAG +
Preference number: 4 (lower is better)
Translates to: EQRLTGLLKWLRVAQGRGMGMSV*LGKGTE
Trigger: CTCCGTCCCTTTCCCCAGCCAGACACTCATTCCCAT...TCCTCTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CCA 90 bp GACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGGCTCCTGGGACCAGATaGTCAATGGGAATGAGTGTC +
Preference number: 4 (lower is better)
Translates to: DGAAVDGAAEMAESGTGQAPGTR*SMGMSV
Trigger: GACACTCATTCCCATTGACCATCTGGTCCCAGGAGC...CTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CCA 90 bp CTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGGCTCCTGGGACCAGATaGTCAATGGGAATGAGTGTC +
Preference number: 4 (lower is better)
Translates to: LAGERDGAAVDGAAEMAEAPGTR*SMGMSV
Trigger: GACACTCATTCCCATTGACCATCTGGTCCCAGGAGC...CTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CCA 90 bp GGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGAGGAGGCCCGGAGGAATGTaGGCTAAGAAGCAGAGTCTT +
Preference number: 4 (lower is better)
Translates to: GAAVDGAAEMAESGTGQRRPGGM*AKKQSL
Trigger: AAGACTCTGCTTCTTAGCCCACATTCCTCCGGGCCT...CCTCTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp GAGTGTCTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGACGGGCAGCCGTCCGTaGAAATTAGTTCCCCAAACC +
Preference number: 4 (lower is better)
Translates to: ECLAGERDGAAVDGAAEMTGSRP*KLVPQT
Trigger: GGTTTGGGGAACTAATTTCCACGGACGGCTGCCCGT...CATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAGACACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp GCAGAGGGAGCTCAGCTCCTTTCTGAGCTGTCAGTTGCTACCCCAGTAGCAGGCGGGGAGCACAGCCCATaGAGACACATCGGAACCTGC +
Preference number: 4 (lower is better)
Translates to: AEGAQLLSELSVATPVAGGEHSP*RHIGTC
Trigger: GCAGGTTCCGATGTGTCTCCATGGGCTGTGCTCCCC...GCCTGCTACTGGGGTAGCAACTGACAGCTCAGAAAGGAGCTGAGCTCCCTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp GAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACATCAAGAGGCTGGTGGTaGGGGTCCCGTGGGCATTTA +
Preference number: 4 (lower is better)
Translates to: ERDGAAVDGAAEMAESGTSRGWW*GSRGHL
Trigger: TAAATGCCCACGGGACCCCCACCACCAGCCTCTTGA...TGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp CTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGTGTGCTAGGTGGGAGTaGGAAAAGGAGTGGGGGAAG +
Preference number: 4 (lower is better)
Translates to: LGKGTEQRLTGLLKWLRVCARWE*EKEWGK
Trigger: CTTCCCCCACTCCTTTTCCCACTCCCACCTAGCACA...CACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000249883.10
CDS-3UTR TCA 90 bp CCTCCTGGGCACTGTTTTGTGATGGGGGCTCCATTCAGAGGACTATTTGACTCTGCCTGCTGCAGCACCTaGCTGTCCTCTGGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: PPGHCFVMGAPFRGLFDSACCST*LSSGAR
Trigger: CCTGGCCCCAGAGGACAGTCAGGTGCTGCAGCAGGC...AGAGTCAAATAGTCCTCTGAATGGAGCCCCCATCACAAAACAGTGCCCAGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR TCA 90 bp TGTCTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGCTGCTGAAGGACCTTaGTCACTGCATCCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: CLAGERDGAAVDGAAEMAAAEGP*SLHPSP
Trigger: TGGAGAAGGATGCAGTGATCAAGGTCCTTCAGCAGC...AGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR TCA 90 bp GACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGTATCTCCACCATGTCTaGCAAGTCCTGGACTCTGGA +
Preference number: 4 (lower is better)
Translates to: DGAAVDGAAEMAESGTGQYLHHV*QVLDSG
Trigger: TCCAGAGTCCAGGACTTGTCAGACATGGTGGAGATA...CTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR TCA 90 bp TGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAAATGGCTCAGAGTCCTaGAGCACCACCTCCTTCAGA +
Preference number: 4 (lower is better)
Translates to: WLGKGTEQRLTGLLKWLRNGSES*STTSFR
Trigger: TCTGAAGGAGGTGGTGCTTCAGGACTCTGAGCCATT...TCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR TCA 90 bp CTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGAATGGCTCAGAGTCCTaGAGCACCACCTCCTTCAGA +
Preference number: 4 (lower is better)
Translates to: LGKGTEQRLTGLLKWLRVNGSES*STTSFR
Trigger: TCTGAAGGAGGTGGTGCTTCAGGACTCTGAGCCATT...CACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR TCA 90 bp GAGCTGTCAGTTGCTACCCCAGTAGCAGGCCTTGGGCAAGAAGTCAAGGCTGAACACTCCCTCCCTGCCTaGCTGACAACTGGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: ELSVATPVAGLGQEVKAEHSLPA*LTTGRA
Trigger: TGCCCTGCCAGTTGTCAGTCAGGCAGGGAGGGAGTG...TTCAGCCTTGACTTCTTGCCCAAGGCCTGCTACTGGGGTAGCAACTGACAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR TCA 90 bp GCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGAGGAGGGAACTGAAGAGCAGATaGCGTTGGCTGGAACCAAAC +
Preference number: 4 (lower is better)
Translates to: AAVDGAAEMAESGTGQRRELKSR*RWLEPN
Trigger: GTTTGGTTCCAGCCAACGTCATCTGCTCTTCAGTTC...CCTCCTCTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR TCA 90 bp TGTCTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTAAGGCAGTGAGGAACTaGAGAGCAGATGACGTTGGC +
Preference number: 4 (lower is better)
Translates to: CLAGERDGAAVDGAAEMAKAVRN*RADDVG
Trigger: GCCAACGTCATCTGCTCTTCAGTTCCTCACTGCCTT...AGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR TCA 90 bp GGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCATCCCAAGAAGGCAGTaGGGAACTGAAGAGCAGATG +
Preference number: 4 (lower is better)
Translates to: GERDGAAVDGAAEMAESGIPRRQ*GTEEQM
Trigger: CATCTGCTCTTCAGTTCCTCACTGCCTTCTTGGGAT...GCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR TCA 90 bp GGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCAATAGCTCCTGGGGCTaGAGTGAGGGACTCTTTAAG +
Preference number: 4 (lower is better)
Translates to: GERDGAAVDGAAEMAESGNSSWG*SEGLFK
Trigger: CTTAAAGAGTCCCTCACTTCAGCCCCAGGAGCTATT...GCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp CAAGAGGCTGGTGGTGGGGGTCCCGTGGGCATTTATAGGGCTCAAGATAGAGGAGCGTCTCAGTCAGGTTaGCGTAGCGCAGCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: QEAGGGGPVGIYRAQDRGASQSG*RSAAAP
Trigger: AGGAGCAGCTGCGCTACGGCAACCTGACTGAGACGC...TCCTCTATCTTGAGCCCTATAAATGCCCACGGGACCCCCACCACCAGCCTCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp CAAAGCATCTGGTGCTGCTTTAGGGCGCTGGGCATGGGTAGCTTGAGGAGCCAGGTAGAGGGTGTTCTCTaGCAGGTGGTTCTCACCGCC +
Preference number: 4 (lower is better)
Translates to: QSIWCCFRALGMGSLRSQVEGVL*QVVLTA
Trigger: GGCGGTGAGAACCACCTGGCAGAGAACACCCTCTAC...CTGGCTCCTCAAGCTACCCATGCCCAGCGCCCTAAAGCAGCACCAGATGCTTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp GGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCTACTGGTACTGCTGCTaGTGTTGGAGGAACACAGGA +
Preference number: 4 (lower is better)
Translates to: GERDGAAVDGAAEMAESGYWYCC*CWRNTG
Trigger: TCCTGTGTTCCTCCAACAGCAGCAGCAGTACCAGTA...GCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp GGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGAGGAGGTACTGGTACTGCTaGTGCTGTTGGAGGAACACA +
Preference number: 4 (lower is better)
Translates to: GAAVDGAAEMAESGTGQRRYWYC*CCWRNT
Trigger: TGTGTTCCTCCAACAGCAGCAGCAGTACCAGTACCT...CCTCTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp GACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGTCCCGGTTGAAGTCTTaGAGCCTCCTCATTTCACTG +
Preference number: 4 (lower is better)
Translates to: DGAAVDGAAEMAESGTGQSRLKS*SLLISL
Trigger: CAGTGAAATGAGGAGGCTGCAAGACTTCAACCGGGA...CTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp ACAAGACATCTCCAGTTTCTCAGAAAGAACTGGTACCGGGTAGGGCCACCGAAGCCCGGCCCTGCGCATTaGCCAGAGCCTGCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: TRHLQFLRKNWYRVGPPKPGPAH*PEPAPA
Trigger: TGCTGGAGCAGGCTCTGGGCAATGCGCAGGGCCGGG...CTTCGGTGGCCCTACCCGGTACCAGTTCTTTCTGAGAAACTGGAGATGTCTTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp CAAAGCATCTGGTGCTGCTTTAGGGCGCTGGGCATGGGTAGCTTGAGGAGCCAGCATAGGCCTGCTTCTTaGGCAGCTCCTCTTCGGCTC +
Preference number: 4 (lower is better)
Translates to: QSIWCCFRALGMGSLRSQHRPAS*AAPLRL
Trigger: GAGCCGAAGAGGAGCTGCGCAAGAAGCAGGCCTATG...CTGGCTCCTCAAGCTACCCATGCCCAGCGCCCTAAAGCAGCACCAGATGCTTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp CAGCCTCCTGGGCACTGTTTTGTGATGGGGGCTCCATTCAGAGGACTATTTGACAGCTGCCCGAGCGCCTaGTGCAGCCGCTCCACTTTC +
Preference number: 4 (lower is better)
Translates to: QPPGHCFVMGAPFRGLFDSCPSA*CSRSTF
Trigger: GAAAGTGGAGCGGCTGCAGCAGGCGCTCGGGCAGCT...GTCAAATAGTCCTCTGAATGGAGCCCCCATCACAAAACAGTGCCCAGGAGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp ACCACAGCGTGTGGCCGAACAAAGCTGATTAGAACACAGCCCTACCTCGGGAGGAGACGCAGCTCCAGCTaGTCCCGCTTCTCACAGGCT +
Preference number: 4 (lower is better)
Translates to: TTACGRTKLIRTQPYLGRRRSSS*SRFSQA
Trigger: AGCCTGTGAGAAGCGGGAGCAGCTGGAGCTGCGTCT...CCTCCCGAGGTAGGGCTGTGTTCTAATCAGCTTTGTTCGGCCACACGCTGTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249883.10
CDS-3UTR GCA 90 bp AGGCAGCCGAGATCCTGGGAATCGAGCAGCTTTAACATCCACGGGCCAGGAACTAGGGCCTTGAGTTCCTaGTCCAGGCGAGTCCGCAGA +
Preference number: 4 (lower is better)
Translates to: RQPRSWESSSFNIHGPGTRALSS*SRRVRR
Trigger: TCTGCGGACTCGCCTGGAGCAGGAACTCAAGGCCCT...AGTTCCTGGCCCGTGGATGTTAAAGCTGCTCGATTCCCAGGATCTCGGCTGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp GAGCTGTCAGTTGCTACCCCAGTAGCAGGCCTTGGGCAAGAAGTCAAGGCTGAAACCACCTGGGGCACCTaGCTGTCTCTGCTGTGCACG +
Preference number: 4 (lower is better)
Translates to: ELSVATPVAGLGQEVKAETTWGT*LSLLCT
Trigger: CGTGCACAGCAGAGACAGGCAGGTGCCCCAGGTGGT...TTCAGCCTTGACTTCTTGCCCAAGGCCTGCTACTGGGGTAGCAACTGACAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp GGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGAGGAGACACATCGGAACCTaGAGGCCTCAGTCTTCTGTT +
Preference number: 4 (lower is better)
Translates to: GAAVDGAAEMAESGTGQRRHIGT*RPQSSV
Trigger: AACAGAAGACTGAGGCCTGCAGGTTCCGATGTGTCT...CCTCTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp CAGCCTCCTGGGCACTGTTTTGTGATGGGGGCTCCATTCAGAGGACTATTTGACCTGGACAATGGCCGGTaGCACCTGGCCCCAGAGCAC +
Preference number: 4 (lower is better)
Translates to: QPPGHCFVMGAPFRGLFDLDNGR*HLAPEH
Trigger: GTGCTCTGGGGCCAGGTGCCACCGGCCATTGTCCAG...GTCAAATAGTCCTCTGAATGGAGCCCCCATCACAAAACAGTGCCCAGGAGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp AGTGTCTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGGTCCTCATGCTTCTTTaGCTTGCACACAGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: SVWLGKGTEQRLTGLLKWVLMLL*LAHSCL
Trigger: CAGGCAGCTGTGTGCAAGCCAAAGAAGCATGAGGAC...CCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAGACACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CCA 90 bp GAGTGTCTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGTCCTCATGCTTCTTTaGCTTGCACACAGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: ECLAGERDGAAVDGAAEMVLMLL*LAHSCL
Trigger: CAGGCAGCTGTGTGCAAGCCAAAGAAGCATGAGGAC...CATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAGACACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CCA 90 bp GAGCTGTCAGTTGCTACCCCAGTAGCAGGCCTTGGGCAAGAAGTCAAGGCTGAACTGACTTCAGCATGCTaGAAGTGCGGGCTGCCGCGG +
Preference number: 4 (lower is better)
Translates to: ELSVATPVAGLGQEVKAELTSAC*KCGLPR
Trigger: CCGCGGCAGCCCGCACTTCCAGCATGCTGAAGTCAG...TTCAGCCTTGACTTCTTGCCCAAGGCCTGCTACTGGGGTAGCAACTGACAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp GGGGTCCCGTGGGCATTTATAGGGCTCAAGATAGAGGAAAAGGCAGCCGAGATCCTGGTCAGGCTCTCATaGGCCTCAGAGAGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: GVPWAFIGLKIEEKAAEILVRLS*ASESRW
Trigger: CCAGCGGCTCTCTGAGGCCCATGAGAGCCTGACCAG...GATCTCGGCTGCCTTTTCCTCTATCTTGAGCCCTATAAATGCCCACGGGACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp GGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCTCCAGGATCTGGGCATaGAGCACCTTTAACCTGCTT +
Preference number: 4 (lower is better)
Translates to: GERDGAAVDGAAEMAESGSRIWA*STFNLL
Trigger: AAGCAGGTTAAAGGTGCTCCATGCCCAGATCCTGGA...GCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CCA 90 bp GACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGTCCTTCTCCAGGATCTaGGCATGGAGCACCTTTAAC +
Preference number: 4 (lower is better)
Translates to: DGAAVDGAAEMAESGTGQSFSRI*AWSTFN
Trigger: GTTAAAGGTGCTCCATGCCCAGATCCTGGAGAAGGA...CTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CCA 90 bp ACCACAGCGTGTGGCCGAACAAAGCTGATTAGAACACAGCCCTACCTCGGGAGGAGCCGCGAAAACAGATaGCACCGACTTGGCAGGCCG +
Preference number: 4 (lower is better)
Translates to: TTACGRTKLIRTQPYLGRSRENR*HRLGRP
Trigger: CGGCCTGCCAAGTCGGTGCCATCTGTTTTCGCGGCT...CCTCCCGAGGTAGGGCTGTGTTCTAATCAGCTTTGTTCGGCCACACGCTGTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249883.10
CDS-3UTR CCA 90 bp ACAAGACATCTCCAGTTTCTCAGAAAGAACTGGTACCGGGTAGGGCCACCGAAGAGCCCTTGCCAGCCCTaGGTTCCTGCTGCCGCAGCC +
Preference number: 4 (lower is better)
Translates to: TRHLQFLRKNWYRVGPPKSPCQP*VPAAAA
Trigger: GGCTGCGGCAGCAGGAACCCAGGGCTGGCAAGGGCT...CTTCGGTGGCCCTACCCGGTACCAGTTCTTTCTGAGAAACTGGAGATGTCTTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp CCTCCTGGGCACTGTTTTGTGATGGGGGCTCCATTCAGAGGACTATTTGACTCTAGCCCTTGCCAGCCCTaGGTTCCTGCTGCCGCAGCC +
Preference number: 4 (lower is better)
Translates to: PPGHCFVMGAPFRGLFDSSPCQP*VPAAAA
Trigger: GGCTGCGGCAGCAGGAACCCAGGGCTGGCAAGGGCT...AGAGTCAAATAGTCCTCTGAATGGAGCCCCCATCACAAAACAGTGCCCAGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp AGTGTCTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGGCTCCTGGGACCAGATaGTCAATGGGAATGAGTGTC +
Preference number: 4 (lower is better)
Translates to: SVWLGKGTEQRLTGLLKWAPGTR*SMGMSV
Trigger: GACACTCATTCCCATTGACCATCTGGTCCCAGGAGC...CCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAGACACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CCA 90 bp CAAAGCATCTGGTGCTGCTTTAGGGCGCTGGGCATGGGTAGCTTGAGGAGCCAGTGCCTGACTGACAACTaGCAGGGCAGAGGGAGCTCA +
Preference number: 4 (lower is better)
Translates to: QSIWCCFRALGMGSLRSQCLTDN*QGRGSS
Trigger: TGAGCTCCCTCTGCCCTGCCAGTTGTCAGTCAGGCA...CTGGCTCCTCAAGCTACCCATGCCCAGCGCCCTAAAGCAGCACCAGATGCTTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp GCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGAGGAGGAGGAGGAGGCATAACTaGGAGGCCAGTCAGAAGTTT +
Preference number: 4 (lower is better)
Translates to: AAVDGAAEMAESGTGQRRRRRHN*EASQKF
Trigger: AAACTTCTGACTGGCCTCCCAGTTATGCCTCCTCCT...CCTCCTCTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp CAGCCTCCTGGGCACTGTTTTGTGATGGGGGCTCCATTCAGAGGACTATTTGACGCCACTTCAAGAGGCTaGTGGTGGGGGTCCCGTGGG +
Preference number: 4 (lower is better)
Translates to: QPPGHCFVMGAPFRGLFDATSRG*WWGSRG
Trigger: CCCACGGGACCCCCACCACCAGCCTCTTGAAGTGGC...GTCAAATAGTCCTCTGAATGGAGCCCCCATCACAAAACAGTGCCCAGGAGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp AGGCAGCCGAGATCCTGGGAATCGAGCAGCTTTAACATCCACGGGCCAGGAACTGCCCACCTGGGGGCATaGCAGATGTCTGTTCACGGT +
Preference number: 4 (lower is better)
Translates to: RQPRSWESSSFNIHGPGTAHLGA*QMSVHG
Trigger: ACCGTGAACAGACATCTGCCATGCCCCCAGGTGGGC...AGTTCCTGGCCCGTGGATGTTAAAGCTGCTCGATTCCCAGGATCTCGGCTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR TCA 90 bp GGAGACACATCGGAACCTGCAGGCCTCAGTCTTCTGTTCCACAAGAAAGGGAATGCAGCTGCTCCTGGATaGGGCGGTGCAGGACTGTCC +
Preference number: 4 (lower is better)
Translates to: GDTSEPAGLSLLFHKKGNAAAPG*GGAGLS
Trigger: GGACAGTCCTGCACCGCCTCATCCAGGAGCAGCTGC...ATTCCCTTTCTTGTGGAACAGAAGACTGAGGCCTGCAGGTTCCGATGTGTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR TCA 90 bp CAAGAGGCTGGTGGTGGGGGTCCCGTGGGCATTTATAGGGCTCAAGATAGAGGAGGTACCGTGGGTCAGTaGCAGCAGTGGTGGTCTCAT +
Preference number: 4 (lower is better)
Translates to: QEAGGGGPVGIYRAQDRGGTVGQ*QQWWSH
Trigger: ATGAGACCACCACTGCTGTCACTGACCCACGGTACC...TCCTCTATCTTGAGCCCTATAAATGCCCACGGGACCCCCACCACCAGCCTCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR TCA 90 bp ACAAGACATCTCCAGTTTCTCAGAAAGAACTGGTACCGGGTAGGGCCACCGAAGCCACAGCAGGTGGACTaGGGGAGCTCAGGGGGCCAT +
Preference number: 4 (lower is better)
Translates to: TRHLQFLRKNWYRVGPPKPQQVD*GSSGGH
Trigger: ATGGCCCCCTGAGCTCCCTCAGTCCACCTGCTGTGG...CTTCGGTGGCCCTACCCGGTACCAGTTCTTTCTGAGAAACTGGAGATGTCTTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR TCA 90 bp GACCAAACTGACAGGATGTTCCAGGGACAGGAGCTGTGGAGCCACTTCAAGAGGCTCTCGCAGTTGTTCTaGCAGTCGCAGGGCGCTGAG +
Preference number: 4 (lower is better)
Translates to: DQTDRMFQGQELWSHFKRLSQLF*QSQGAE
Trigger: CTCAGCGCCCTGCGACTGTCAGAACAACTGCGAGAG...CCTCTTGAAGTGGCTCCACAGCTCCTGTCCCTGGAACATCCTGTCAGTTTGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR TCA 90 bp AAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGCTGCTGAAGGACCTTaGTCACTGCATCCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: KGTEQRLTGLLKWLRVAQAAEGP*SLHPSP
Trigger: TGGAGAAGGATGCAGTGATCAAGGTCCTTCAGCAGC...CTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR TCA 90 bp GAGTGTCTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGTATCTCCACCATGTCTaGCAAGTCCTGGACTCTGGA +
Preference number: 4 (lower is better)
Translates to: ECLAGERDGAAVDGAAEMYLHHV*QVLDSG
Trigger: TCCAGAGTCCAGGACTTGTCAGACATGGTGGAGATA...CATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAGACACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR TCA 90 bp GAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGATGGTCAATGGGAATaGGTGTCTGGCTGGGGAAAG +
Preference number: 4 (lower is better)
Translates to: ERDGAAVDGAAEMAESGTDGQWE*VSGWGK
Trigger: CTTTCCCCAGCCAGACACTCATTCCCATTGACCATC...TGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR TCA 90 bp AGTGTCTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGGAACTGAAGAGCAGATaGCGTTGGCTGGAACCAAAC +
Preference number: 4 (lower is better)
Translates to: SVWLGKGTEQRLTGLLKWELKSR*RWLEPN
Trigger: GTTTGGTTCCAGCCAACGTCATCTGCTCTTCAGTTC...CCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAGACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp GACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGCTTCCAGTGTCCTCATaGTTCTTTGGCTTGCACACA +
Preference number: 4 (lower is better)
Translates to: DGAAVDGAAEMAESGTGQLPVSS*FFGLHT
Trigger: TGTGTGCAAGCCAAAGAAGCATGAGGACACTGGAAG...CTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp CAGCCTCCTGGGCACTGTTTTGTGATGGGGGCTCCATTCAGAGGACTATTTGACTCCTGGATGAGGCGGTaGAGGACTGTCCCCGAGGAG +
Preference number: 4 (lower is better)
Translates to: QPPGHCFVMGAPFRGLFDSWMRR*RTVPEE
Trigger: CTCCTCGGGGACAGTCCTGCACCGCCTCATCCAGGA...GTCAAATAGTCCTCTGAATGGAGCCCCCATCACAAAACAGTGCCCAGGAGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp GACCAAACTGACAGGATGTTCCAGGGACAGGAGCTGTGGAGCCACTTCAAGAGGGGATGGCTAGCAGCGTaGGCGTCTCAGTCAGGTTGC +
Preference number: 4 (lower is better)
Translates to: DQTDRMFQGQELWSHFKRGWLAA*ASQSGC
Trigger: GCAACCTGACTGAGACGCGCACGCTGCTAGCCATCC...CCTCTTGAAGTGGCTCCACAGCTCCTGTCCCTGGAACATCCTGTCAGTTTGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp ACAAGACATCTCCAGTTTCTCAGAAAGAACTGGTACCGGGTAGGGCCACCGAAGCTCAACGAGCGCACGTaGCCATGCCTCAGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: TRHLQFLRKNWYRVGPPKLNERT*PCLSSR
Trigger: GCGGGAGCTGAGGCATGGGCACGTGCGCTCGTTGAG...CTTCGGTGGCCCTACCCGGTACCAGTTCTTTCTGAGAAACTGGAGATGTCTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp GGAGACACATCGGAACCTGCAGGCCTCAGTCTTCTGTTCCACAAGAAAGGGAATCTCAACGAGCGCACGTaGCCATGCCTCAGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: GDTSEPAGLSLLFHKKGNLNERT*PCLSSR
Trigger: GCGGGAGCTGAGGCATGGGCACGTGCGCTCGTTGAG...ATTCCCTTTCTTGTGGAACAGAAGACTGAGGCCTGCAGGTTCCGATGTGTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp GAGTGTCTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGTACTGGTACTGCTGCTaGTGTTGGAGGAACACAGGA +
Preference number: 4 (lower is better)
Translates to: ECLAGERDGAAVDGAAEMYWYCC*CWRNTG
Trigger: TCCTGTGTTCCTCCAACAGCAGCAGCAGTACCAGTA...CATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAGACACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp TTTAGGGCGCTGGGCATGGGTAGCTTGAGGAGCCAGCCTCCTGGGCACTGTTTTCGCTCATTGTCTCTCTaGAGCCTGGCATTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: FRALGMGSLRSQPPGHCFRSLSL*SLAFSL
Trigger: GAGGGAGAATGCCAGGCTGCAGAGAGACAATGAGCG...AAAACAGTGCCCAGGAGGCTGGCTCCTCAAGCTACCCATGCCCAGCGCCCTAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp GGGGTCCCGTGGGCATTTATAGGGCTCAAGATAGAGGAAAAGGCAGCCGAGATCAGACGCAGCTCCAGCTaGTCCCGCTTCTCACAGGCT +
Preference number: 4 (lower is better)
Translates to: GVPWAFIGLKIEEKAAEIRRSSS*SRFSQA
Trigger: AGCCTGTGAGAAGCGGGAGCAGCTGGAGCTGCGTCT...GATCTCGGCTGCCTTTTCCTCTATCTTGAGCCCTATAAATGCCCACGGGACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp TGTCTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGGAGCACCTTTAACCTaGTTTCCATCTCCTGATGCC +
Preference number: 4 (lower is better)
Translates to: CLAGERDGAAVDGAAEMAGAPLT*FPSPDA
Trigger: GGCATCAGGAGATGGAAAGCAGGTTAAAGGTGCTCC...AGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp AGTGTCTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGGGAGCACCTTTAACCTaGTTTCCATCTCCTGATGCC +
Preference number: 4 (lower is better)
Translates to: SVWLGKGTEQRLTGLLKWGAPLT*FPSPDA
Trigger: GGCATCAGGAGATGGAAAGCAGGTTAAAGGTGCTCC...CCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAGACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp GGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCAAGGACCTTGATCACTaGATCCTTCTCCAGGATCTG +
Preference number: 4 (lower is better)
Translates to: GERDGAAVDGAAEMAESGKDLDH*ILLQDL
Trigger: CAGATCCTGGAGAAGGATGCAGTGATCAAGGTCCTT...GCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp CAGAAAGAACTGGTACCGGGTAGGGCCACCGAAGCCCACCTGGGGGCATGGCAGAAGGACCTTGATCACTaGATCCTTCTCCAGGATCTG +
Preference number: 4 (lower is better)
Translates to: QKELVPGRATEAHLGAWQKDLDH*ILLQDL
Trigger: CAGATCCTGGAGAAGGATGCAGTGATCAAGGTCCTT...CTGCCATGCCCCCAGGTGGGCTTCGGTGGCCCTACCCGGTACCAGTTCTTTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp GACCAAACTGACAGGATGTTCCAGGGACAGGAGCTGTGGAGCCACTTCAAGAGGGGGTGCTCCCATCTCTaGTCCCGTGTTTGGCATGGG +
Preference number: 4 (lower is better)
Translates to: DQTDRMFQGQELWSHFKRGCSHL*SRVWHG
Trigger: CCCATGCCAAACACGGGAGCAGAGATGGGAGCACCC...CCTCTTGAAGTGGCTCCACAGCTCCTGTCCCTGGAACATCCTGTCAGTTTGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp ACCACAGCGTGTGGCCGAACAAAGCTGATTAGAACACAGCCCTACCTCGGGAGGCTCTCTGGCTACTGCTaGACCCCAGAAGGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: TTACGRTKLIRTQPYLGRLSGYC*TPEGCQ
Trigger: CTGACAGCCTTCTGGGGTGCAGCAGTAGCCAGAGAG...CCTCCCGAGGTAGGGCTGTGTTCTAATCAGCTTTGTTCGGCCACACGCTGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249883.10
CDS-3UTR GCA 90 bp AGGCAGCCGAGATCCTGGGAATCGAGCAGCTTTAACATCCACGGGCCAGGAACTCTGCTCTCTGGCTACTaGTGCACCCCAGAAGGCTGT +
Preference number: 4 (lower is better)
Translates to: RQPRSWESSSFNIHGPGTLLSGY*CTPEGC
Trigger: ACAGCCTTCTGGGGTGCAGCAGTAGCCAGAGAGCAG...AGTTCCTGGCCCGTGGATGTTAAAGCTGCTCGATTCCCAGGATCTCGGCTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp CAAAGCATCTGGTGCTGCTTTAGGGCGCTGGGCATGGGTAGCTTGAGGAGCCAGCAAAGCATCTGGTGCTaGTTTAGGGCGCTGGGCATG +
Preference number: 4 (lower is better)
Translates to: QSIWCCFRALGMGSLRSQQSIWC*FRALGM
Trigger: CATGCCCAGCGCCCTAAAGCAGCACCAGATGCTTTG...CTGGCTCCTCAAGCTACCCATGCCCAGCGCCCTAAAGCAGCACCAGATGCTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp AAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGTCCTCATGCTTCTTTaGCTTGCACACAGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: KGTEQRLTGLLKWLRVAQVLMLL*LAHSCL
Trigger: CAGGCAGCTGTGTGCAAGCCAAAGAAGCATGAGGAC...CTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CCA 90 bp AAATACTGTTATACCCAGTGGAATGCGGCAGCAATCCTGGTACAGGGTGGCATAGCCGCTGGTCCTCGATaGCGCCGCGCAGCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: KYCYTQWNAAAILVQGGIAAGPR*RRAAVP
Trigger: TGGCACTGCTGCGCGGCGCCATCGAGGACCAGCGGC...TATGCCACCCTGTACCAGGATTGCTGCCGCATTCCACTGGGTATAACAGTATTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp GGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGAGGTGGCAAACTGCCTCATaGCACGTTCCTCCAAATACT +
Preference number: 4 (lower is better)
Translates to: GAAVDGAAEMAESGTGQRWQTAS*HVPPNT
Trigger: AGTATTTGGAGGAACGTGCCATGAGGCAGTTTGCCA...CCTCTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CCA 90 bp TGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGATCCAGGATCTGGGCATaGAGCACCTTTAACCTGCTT +
Preference number: 4 (lower is better)
Translates to: WLGKGTEQRLTGLLKWLRSRIWA*STFNLL
Trigger: AAGCAGGTTAAAGGTGCTCCATGCCCAGATCCTGGA...TCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CCA 90 bp CTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGTCCTTCTCCAGGATCTaGGCATGGAGCACCTTTAAC +
Preference number: 4 (lower is better)
Translates to: LGKGTEQRLTGLLKWLRVSFSRI*AWSTFN
Trigger: GTTAAAGGTGCTCCATGCCCAGATCCTGGAGAAGGA...CACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CCA 90 bp AGTGTCTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGTCCTTCTCCAGGATCTaGGCATGGAGCACCTTTAAC +
Preference number: 4 (lower is better)
Translates to: SVWLGKGTEQRLTGLLKWSFSRI*AWSTFN
Trigger: GTTAAAGGTGCTCCATGCCCAGATCCTGGAGAAGGA...CCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAGACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CCA 90 bp CAGCCTCCTGGGCACTGTTTTGTGATGGGGGCTCCATTCAGAGGACTATTTGACCTCTGCTCCCGTGTTTaGCATGGGCAGCAGGGGGAG +
Preference number: 4 (lower is better)
Translates to: QPPGHCFVMGAPFRGLFDLCSRV*HGQQGE
Trigger: CTCCCCCTGCTGCCCATGCCAAACACGGGAGCAGAG...GTCAAATAGTCCTCTGAATGGAGCCCCCATCACAAAACAGTGCCCAGGAGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp GAGAACAATATGGCTGACTTGATTAGTGAACCAGTCCACCTGGTGTCCACGGGCGCTGTCAGGCTCCGGTaGCAGGCAGGTGGAGGTGCT +
Preference number: 4 (lower is better)
Translates to: ENNMADLISEPVHLVSTGAVRLR*QAGGGA
Trigger: AGCACCTCCACCTGCCTGCCACCGGAGCCTGACAGC...GCCCGTGGACACCAGGTGGACTGGTTCACTAATCAAGTCAGCCATATTGTTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp CTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGAGGAGGAGGCATAACTaGGAGGCCAGTCAGAAGTTT +
Preference number: 4 (lower is better)
Translates to: LGKGTEQRLTGLLKWLRVRRRHN*EASQKF
Trigger: AAACTTCTGACTGGCCTCCCAGTTATGCCTCCTCCT...CACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp AGGCAGCCGAGATCCTGGGAATCGAGCAGCTTTAACATCCACGGGCCAGGAACTGAGGAGCCAGCCTCCTaGGCACTGTTTTGTGATGGG +
Preference number: 4 (lower is better)
Translates to: RQPRSWESSSFNIHGPGTEEPAS*ALFCDG
Trigger: CCCATCACAAAACAGTGCCCAGGAGGCTGGCTCCTC...AGTTCCTGGCCCGTGGATGTTAAAGCTGCTCGATTCCCAGGATCTCGGCTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp CAGAAAGAACTGGTACCGGGTAGGGCCACCGAAGCCCACCTGGGGGCATGGCAGTACTGTTATACCCAGTaGAATGCGGCAGCAATCCTG +
Preference number: 4 (lower is better)
Translates to: QKELVPGRATEAHLGAWQYCYTQ*NAAAIL
Trigger: CAGGATTGCTGCCGCATTCCACTGGGTATAACAGTA...CTGCCATGCCCCCAGGTGGGCTTCGGTGGCCCTACCCGGTACCAGTTCTTTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp ACAAGACATCTCCAGTTTCTCAGAAAGAACTGGTACCGGGTAGGGCCACCGAAGATGGCCGGTGGCACCTaGCCCCAGAGCACCCAACTG +
Preference number: 4 (lower is better)
Translates to: TRHLQFLRKNWYRVGPPKMAGGT*PQSTQL
Trigger: CAGTTGGGTGCTCTGGGGCCAGGTGCCACCGGCCAT...CTTCGGTGGCCCTACCCGGTACCAGTTCTTTCTGAGAAACTGGAGATGTCTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514516.5
CDS-3UTR TCA 90 bp GAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGAACTGAAGAGCAGATaGCGTTGGCTGGAACCAAAC +
Preference number: 4 (lower is better)
Translates to: ERDGAAVDGAAEMAESGTELKSR*RWLEPN
Trigger: GTTTGGTTCCAGCCAACGTCATCTGCTCTTCAGTTC...TGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR TCA 90 bp CAGCCTCCTGGGCACTGTTTTGTGATGGGGGCTCCATTCAGAGGACTATTTGACCACGGGCCAGGAACTTaGGGAGGAGGCATAACTGGG +
Preference number: 4 (lower is better)
Translates to: QPPGHCFVMGAPFRGLFDHGPGT*GGGITG
Trigger: CCCAGTTATGCCTCCTCCTCAAGTTCCTGGCCCGTG...GTCAAATAGTCCTCTGAATGGAGCCCCCATCACAAAACAGTGCCCAGGAGGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR TCA 90 bp AAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGAATAGCTCCTGGGGCTaGAGTGAGGGACTCTTTAAG +
Preference number: 4 (lower is better)
Translates to: KGTEQRLTGLLKWLRVAQNSSWG*SEGLFK
Trigger: CTTAAAGAGTCCCTCACTTCAGCCCCAGGAGCTATT...CTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp GGGGTCCCGTGGGCATTTATAGGGCTCAAGATAGAGGAAAAGGCAGCCGAGATCGTAGAGGGTGTTCTCTaGCAGGTGGTTCTCACCGCC +
Preference number: 4 (lower is better)
Translates to: GVPWAFIGLKIEEKAAEIVEGVL*QVVLTA
Trigger: GGCGGTGAGAACCACCTGGCAGAGAACACCCTCTAC...GATCTCGGCTGCCTTTTCCTCTATCTTGAGCCCTATAAATGCCCACGGGACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp GGAGACACATCGGAACCTGCAGGCCTCAGTCTTCTGTTCCACAAGAAAGGGAATATGTGGCCGGGTCCCTaGCTGCTGGGCCGCATAGTA +
Preference number: 4 (lower is better)
Translates to: GDTSEPAGLSLLFHKKGNMWPGP*LLGRIV
Trigger: TACTATGCGGCCCAGCAGGCAGGGACCCGGCCACAT...ATTCCCTTTCTTGTGGAACAGAAGACTGAGGCCTGCAGGTTCCGATGTGTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp AAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGTCCCGGTTGAAGTCTTaGAGCCTCCTCATTTCACTG +
Preference number: 4 (lower is better)
Translates to: KGTEQRLTGLLKWLRVAQSRLKS*SLLISL
Trigger: CAGTGAAATGAGGAGGCTGCAAGACTTCAACCGGGA...CTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp GAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACATGCCAGGCGGCGATTTaGAGATTCCAATCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: ERDGAAVDGAAEMAESGTCQAAI*RFQSLS
Trigger: AGAGAGAGATTGGAATCTGCAAATCGCCGCCTGGCA...TGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp CAGCCTCCTGGGCACTGTTTTGTGATGGGGGCTCCATTCAGAGGACTATTTGACAGGGCCTTGAGTTCCTaGTCCAGGCGAGTCCGCAGA +
Preference number: 4 (lower is better)
Translates to: QPPGHCFVMGAPFRGLFDRALSS*SRRVRR
Trigger: TCTGCGGACTCGCCTGGAGCAGGAACTCAAGGCCCT...GTCAAATAGTCCTCTGAATGGAGCCCCCATCACAAAACAGTGCCCAGGAGGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp GGAGACACATCGGAACCTGCAGGCCTCAGTCTTCTGTTCCACAAGAAAGGGAATGCACCTGCCTGTCTCTaGTGTGCACGCAGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: GDTSEPAGLSLLFHKKGNAPACL*CARRAL
Trigger: CAAGGCCCTGCGTGCACAGCAGAGACAGGCAGGTGC...ATTCCCTTTCTTGTGGAACAGAAGACTGAGGCCTGCAGGTTCCGATGTGTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp ACCACAGCGTGTGGCCGAACAAAGCTGATTAGAACACAGCCCTACCTCGGGAGGGCATCCATGGCAAACTaGCTCATGGCACGTTCCTCC +
Preference number: 4 (lower is better)
Translates to: TTACGRTKLIRTQPYLGRASMAN*LMARSS
Trigger: GGAGGAACGTGCCATGAGGCAGTTTGCCATGGATGC...CCTCCCGAGGTAGGGCTGTGTTCTAATCAGCTTTGTTCGGCCACACGCTGTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249883.10
CDS-3UTR GCA 90 bp GAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGAGGAAAGGACCTTGATCACTaGATCCTTCTCCAGGATCTG +
Preference number: 4 (lower is better)
Translates to: EQRLTGLLKWLRVAQGRGKDLDH*ILLQDL
Trigger: CAGATCCTGGAGAAGGATGCAGTGATCAAGGTCCTT...TCCTCTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR GCA 90 bp ACAAGACATCTCCAGTTTCTCAGAAAGAACTGGTACCGGGTAGGGCCACCGAAGAGCCCTGGATGGCCTTaGCAGGGTCTCTCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: TRHLQFLRKNWYRVGPPKSPGWP*QGLSWS
Trigger: GCTCCAGGAGAGACCCTGGCAAGGCCATCCAGGGCT...CTTCGGTGGCCCTACCCGGTACCAGTTCTTTCTGAGAAACTGGAGATGTCTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp CCTCCTGGGCACTGTTTTGTGATGGGGGCTCCATTCAGAGGACTATTTGACTCTGGCCCTCAGTCTGGGTaGTCCCATCTCTGCTCCCGT +
Preference number: 4 (lower is better)
Translates to: PPGHCFVMGAPFRGLFDSGPQSG*SHLCSR
Trigger: ACGGGAGCAGAGATGGGAGCACCCAGACTGAGGGCC...AGAGTCAAATAGTCCTCTGAATGGAGCCCCCATCACAAAACAGTGCCCAGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp AAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGAGACACATCGGAACCTaGAGGCCTCAGTCTTCTGTT +
Preference number: 4 (lower is better)
Translates to: KGTEQRLTGLLKWLRVAQRHIGT*RPQSSV
Trigger: AACAGAAGACTGAGGCCTGCAGGTTCCGATGTGTCT...CTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp AGGCAGCCGAGATCCTGGGAATCGAGCAGCTTTAACATCCACGGGCCAGGAACTTTCCAAAGCATCTGGTaGTGCTTTAGGGCGCTGGGC +
Preference number: 4 (lower is better)
Translates to: RQPRSWESSSFNIHGPGTFQSIW*CFRALG
Trigger: GCCCAGCGCCCTAAAGCAGCACCAGATGCTTTGGAA...AGTTCCTGGCCCGTGGATGTTAAAGCTGCTCGATTCCCAGGATCTCGGCTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp GAGCTGTCAGTTGCTACCCCAGTAGCAGGCCTTGGGCAAGAAGTCAAGGCTGAACTGCTGCTAGCAGGCTaGCATGTGGGTGTTTCACCC +
Preference number: 4 (lower is better)
Translates to: ELSVATPVAGLGQEVKAELLLAG*HVGVSP
Trigger: GGGTGAAACACCCACATGGCAGCCTGCTAGCAGCAG...TTCAGCCTTGACTTCTTGCCCAAGGCCTGCTACTGGGGTAGCAACTGACAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp CCTGGGCACTGTTTTGTGATGGGGGCTCCATTCAGAGGACTATTTGACTCTTGTCCTACCTCGGGAGGCTaGCATCTGCCAGGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: PGHCFVMGAPFRGLFDSCPTSGG*HLPGPP
Trigger: AGGAGGGCCTGGCAGATGGCAGCCTCCCGAGGTAGG...ACAAGAGTCAAATAGTCCTCTGAATGGAGCCCCCATCACAAAACAGTGCCCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249883.10
CDS-3UTR CCA 90 bp GGCATTTATAGGGCTCAAGATAGAGGAAAAGGCAGCCGAGATCCTGGGAATCGAGGGCCTGCTGCTGGATaGCTAGCAGCGTGCGCGTCT +
Preference number: 4 (lower is better)
Translates to: GIYRAQDRGKGSRDPGNRGPAAG*LAACAS
Trigger: AGACGCGCACGCTGCTAGCCATCCAGCAGCAGGCCC...TCGATTCCCAGGATCTCGGCTGCCTTTTCCTCTATCTTGAGCCCTATAAATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp CAGCCTCCTGGGCACTGTTTTGTGATGGGGGCTCCATTCAGAGGACTATTTGACGTGTTCTCTGCCAGGTaGTTCTCACCGCCCTGGTGC +
Preference number: 4 (lower is better)
Translates to: QPPGHCFVMGAPFRGLFDVFSAR*FSPPWC
Trigger: GCACCAGGGCGGTGAGAACCACCTGGCAGAGAACAC...GTCAAATAGTCCTCTGAATGGAGCCCCCATCACAAAACAGTGCCCAGGAGGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp GAGCTGTCAGTTGCTACCCCAGTAGCAGGCCTTGGGCAAGAAGTCAAGGCTGAAACTGCGAGTGGGCTTTaGCCTCCTCATAGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: ELSVATPVAGLGQEVKAETASGL*PPHRWA
Trigger: TGCCCACCTATGAGGAGGCCAAAGCCCACTCGCAGT...TTCAGCCTTGACTTCTTGCCCAAGGCCTGCTACTGGGGTAGCAACTGACAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp GAGAACAATATGGCTGACTTGATTAGTGAACCAGTCCACCTGGTGTCCACGGGCCTCCCGTGTTTGGCATaGGCAGCAGGGGGAGCTGTG +
Preference number: 4 (lower is better)
Translates to: ENNMADLISEPVHLVSTGLPCLA*AAGGAV
Trigger: CACAGCTCCCCCTGCTGCCCATGCCAAACACGGGAG...GCCCGTGGACACCAGGTGGACTGGTTCACTAATCAAGTCAGCCATATTGTTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp GAATCCTCATTCTCCATAAGGCCCGGAGGAATGTGGGCTAAGAAGCAGAGTCTTGCTGTCAGGCTCCGGTaGCAGGCAGGTGGAGGTGCT +
Preference number: 4 (lower is better)
Translates to: ESSFSIRPGGMWAKKQSLAVRLR*QAGGGA
Trigger: AGCACCTCCACCTGCCTGCCACCGGAGCCTGACAGC...AAGACTCTGCTTCTTAGCCCACATTCCTCCGGGCCTTATGGAGAATGAGGATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp GGGGTCCCGTGGGCATTTATAGGGCTCAAGATAGAGGAAAAGGCAGCCGAGATCAGAGAGGCTGCTCTCTaGCTACTGCTGCACCCCAGA +
Preference number: 4 (lower is better)
Translates to: GVPWAFIGLKIEEKAAEIREAAL*LLLHPR
Trigger: TCTGGGGTGCAGCAGTAGCCAGAGAGCAGCCTCTCT...GATCTCGGCTGCCTTTTCCTCTATCTTGAGCCCTATAAATGCCCACGGGACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp CAAGAGGCTGGTGGTGGGGGTCCCGTGGGCATTTATAGGGCTCAAGATAGAGGAATGGGAATGAGTGTCTaGCTGGGGAAAGGGACGGAG +
Preference number: 4 (lower is better)
Translates to: QEAGGGGPVGIYRAQDRGMGMSV*LGKGTE
Trigger: CTCCGTCCCTTTCCCCAGCCAGACACTCATTCCCAT...TCCTCTATCTTGAGCCCTATAAATGCCCACGGGACCCCCACCACCAGCCTCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp GGGGTCCCGTGGGCATTTATAGGGCTCAAGATAGAGGAAAAGGCAGCCGAGATCAGAAGCAGAGTCTTCTaGGGGTGCCGGTGCTCTCAC +
Preference number: 4 (lower is better)
Translates to: GVPWAFIGLKIEEKAAEIRSRVF*GCRCSH
Trigger: GTGAGAGCACCGGCACCCCCAGAAGACTCTGCTTCT...GATCTCGGCTGCCTTTTCCTCTATCTTGAGCCCTATAAATGCCCACGGGACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp GAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAAGGAGGAGGCATAACTaGGAGGCCAGTCAGAAGTTT +
Preference number: 4 (lower is better)
Translates to: ERDGAAVDGAAEMAESGTRRRHN*EASQKF
Trigger: AAACTTCTGACTGGCCTCCCAGTTATGCCTCCTCCT...TGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp GAGCTGTCAGTTGCTACCCCAGTAGCAGGCCTTGGGCAAGAAGTCAAGGCTGAAGTGGTGGGGGTCCCGTaGGCATTTATAGGGCTCAAG +
Preference number: 4 (lower is better)
Translates to: ELSVATPVAGLGQEVKAEVVGVP*AFIGLK
Trigger: CTTGAGCCCTATAAATGCCCACGGGACCCCCACCAC...TTCAGCCTTGACTTCTTGCCCAAGGCCTGCTACTGGGGTAGCAACTGACAGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp GACCAAACTGACAGGATGTTCCAGGGACAGGAGCTGTGGAGCCACTTCAAGAGGTCAAGAGGCTGGTGGTaGGGGTCCCGTGGGCATTTA +
Preference number: 4 (lower is better)
Translates to: DQTDRMFQGQELWSHFKRSRGWW*GSRGHL
Trigger: TAAATGCCCACGGGACCCCCACCACCAGCCTCTTGA...CCTCTTGAAGTGGCTCCACAGCTCCTGTCCCTGGAACATCCTGTCAGTTTGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp GAGCTGTCAGTTGCTACCCCAGTAGCAGGCCTTGGGCAAGAAGTCAAGGCTGAACAGGGACAGGAGCTGTaGAGCCACTTCAAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: ELSVATPVAGLGQEVKAEQGQEL*SHFKRL
Trigger: CAGCCTCTTGAAGTGGCTCCACAGCTCCTGTCCCTG...TTCAGCCTTGACTTCTTGCCCAAGGCCTGCTACTGGGGTAGCAACTGACAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp CCTCCTGGGCACTGTTTTGTGATGGGGGCTCCATTCAGAGGACTATTTGACTCTCCACCGAAGCCCACCTaGGGGCATGGCAGATGTCTG +
Preference number: 4 (lower is better)
Translates to: PPGHCFVMGAPFRGLFDSPPKPT*GHGRCL
Trigger: CAGACATCTGCCATGCCCCCAGGTGGGCTTCGGTGG...AGAGTCAAATAGTCCTCTGAATGGAGCCCCCATCACAAAACAGTGCCCAGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp GGGGTCCCGTGGGCATTTATAGGGCTCAAGATAGAGGAAAAGGCAGCCGAGATCGAGGAGCCAGCCTCCTaGGCACTGTTTTGTGATGGG +
Preference number: 4 (lower is better)
Translates to: GVPWAFIGLKIEEKAAEIEEPAS*ALFCDG
Trigger: CCCATCACAAAACAGTGCCCAGGAGGCTGGCTCCTC...GATCTCGGCTGCCTTTTCCTCTATCTTGAGCCCTATAAATGCCCACGGGACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp AAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGCAATTCCAAAGCATCTaGTGCTGCTTTAGGGCGCTG +
Preference number: 4 (lower is better)
Translates to: KGTEQRLTGLLKWLRVAQQFQSI*CCFRAL
Trigger: CAGCGCCCTAAAGCAGCACCAGATGCTTTGGAATTG...CTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp GGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCCAGGTAATCAACCACTaGGCTGCTTGGTTTCTCATT +
Preference number: 4 (lower is better)
Translates to: GERDGAAVDGAAEMAESGQVINH*AAWFLI
Trigger: AATGAGAAACCAAGCAGCCCAGTGGTTGATTACCTG...GCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514516.5
CDS-3UTR CCA 90 bp GAGCTGTCAGTTGCTACCCCAGTAGCAGGCCTTGGGCAAGAAGTCAAGGCTGAAAAGGTGTGCCACCGCTaGCTTTTCGCCCAGTCATCC +
Preference number: 4 (lower is better)
Translates to: ELSVATPVAGLGQEVKAEKVCHR*LFAQSS
Trigger: GGATGACTGGGCGAAAAGCCAGCGGTGGCACACCTT...TTCAGCCTTGACTTCTTGCCCAAGGCCTGCTACTGGGGTAGCAACTGACAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000514516.5
CDS-3UTR TCA 90 bp TTTGCTCCTCTCCCAAACCCTCCAGGTGGGAATGAAGACACTTATGCTAACAAGGCAGCTGCTCCTGGATaGGGCGGTGCAGGACTGTCC +
Preference number: 4 (lower is better)
Translates to: FAPLPNPPGGNEDTYANKAAAPG*GGAGLS
Trigger: GGACAGTCCTGCACCGCCTCATCCAGGAGCAGCTGC...CTTGTTAGCATAAGTGTCTTCATTCCCACCTGGAGGGTTTGGGAGAGGAGCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR TCA 90 bp AAATACTGTTATACCCAGTGGAATGCGGCAGCAATCCTGGTACAGGGTGGCATAGTGCACGCAGGGCCTTaGGTTCCTGCTCCAGGCGAG +
Preference number: 4 (lower is better)
Translates to: KYCYTQWNAAAILVQGGIVHAGP*VPAPGE
Trigger: CTCGCCTGGAGCAGGAACTCAAGGCCCTGCGTGCAC...TATGCCACCCTGTACCAGGATTGCTGCCGCATTCCACTGGGTATAACAGTATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR TCA 90 bp GGAGACACATCGGAACCTGCAGGCCTCAGTCTTCTGTTCCACAAGAAAGGGAATCTCTCGCAGTTGTTCTaGCAGTCGCAGGGCGCTGAG +
Preference number: 4 (lower is better)
Translates to: GDTSEPAGLSLLFHKKGNLSQLF*QSQGAE
Trigger: CTCAGCGCCCTGCGACTGTCAGAACAACTGCGAGAG...ATTCCCTTTCTTGTGGAACAGAAGACTGAGGCCTGCAGGTTCCGATGTGTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR TCA 90 bp ACAAGACATCTCCAGTTTCTCAGAAAGAACTGGTACCGGGTAGGGCCACCGAAGCTCTCGCAGTTGTTCTaGCAGTCGCAGGGCGCTGAG +
Preference number: 4 (lower is better)
Translates to: TRHLQFLRKNWYRVGPPKLSQLF*QSQGAE
Trigger: CTCAGCGCCCTGCGACTGTCAGAACAACTGCGAGAG...CTTCGGTGGCCCTACCCGGTACCAGTTCTTTCTGAGAAACTGGAGATGTCTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR TCA 90 bp AAATACTGTTATACCCAGTGGAATGCGGCAGCAATCCTGGTACAGGGTGGCATACCCTCCCTGCCTGACTaGCAACTGGCAGGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: KYCYTQWNAAAILVQGGIPSLPD*QLAGQR
Trigger: CCTCTGCCCTGCCAGTTGTCAGTCAGGCAGGGAGGG...TATGCCACCCTGTACCAGGATTGCTGCCGCATTCCACTGGGTATAACAGTATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR TCA 90 bp TGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAACAATATGGCTGACTTaGTTAGTGAACCAGTCCACC +
Preference number: 4 (lower is better)
Translates to: WLGKGTEQRLTGLLKWLRTIWLT*LVNQST
Trigger: GGTGGACTGGTTCACTAATCAAGTCAGCCATATTGT...TCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR TCA 90 bp AGGCAGCCGAGATCCTGGGAATCGAGCAGCTTTAACATCCACGGGCCAGGAACTAAGGCAGTGAGGAACTaGAGAGCAGATGACGTTGGC +
Preference number: 4 (lower is better)
Translates to: RQPRSWESSSFNIHGPGTKAVRN*RADDVG
Trigger: GCCAACGTCATCTGCTCTTCAGTTCCTCACTGCCTT...AGTTCCTGGCCCGTGGATGTTAAAGCTGCTCGATTCCCAGGATCTCGGCTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp CTCCAGGTGGGAATGAAGACACTTATGCTAACAAGACATCTCCAGTTTCTCAGAGCTGCGGCCCGAGGGTaGCCAGCGCAGTCAGACACC +
Preference number: 4 (lower is better)
Translates to: LQVGMKTLMLTRHLQFLRAAARG*PAQSDT
Trigger: GGTGTCTGACTGCGCTGGGCACCCTCGGGCCGCAGC...TCTGAGAAACTGGAGATGTCTTGTTAGCATAAGTGTCTTCATTCCCACCTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249883.10
ENST00000422605.6
CDS-3UTR GCA 90 bp CCTCCTGGGCACTGTTTTGTGATGGGGGCTCCATTCAGAGGACTATTTGACTCTGGATGGCTAGCAGCGTaGGCGTCTCAGTCAGGTTGC +
Preference number: 4 (lower is better)
Translates to: PPGHCFVMGAPFRGLFDSGWLAA*ASQSGC
Trigger: GCAACCTGACTGAGACGCGCACGCTGCTAGCCATCC...AGAGTCAAATAGTCCTCTGAATGGAGCCCCCATCACAAAACAGTGCCCAGGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp AAATACTGTTATACCCAGTGGAATGCGGCAGCAATCCTGGTACAGGGTGGCATACCACCCCTCAGGGCCTaGTGCTGGATGGCTAGCAGC +
Preference number: 4 (lower is better)
Translates to: KYCYTQWNAAAILVQGGIPPLRA*CWMASS
Trigger: GCTGCTAGCCATCCAGCAGCAGGCCCTGAGGGGTGG...TATGCCACCCTGTACCAGGATTGCTGCCGCATTCCACTGGGTATAACAGTATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp CCTGGGCACTGTTTTGTGATGGGGGCTCCATTCAGAGGACTATTTGACTCTTGTGCAGCTCCTCTCCCTTaGTGGGCTGTGGGCATAGCC +
Preference number: 4 (lower is better)
Translates to: PGHCFVMGAPFRGLFDSCAAPLP*WAVGIA
Trigger: GGCTATGCCCACAGCCCAGCAAGGGAGAGGAGCTGC...ACAAGAGTCAAATAGTCCTCTGAATGGAGCCCCCATCACAAAACAGTGCCCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp AAATACTGTTATACCCAGTGGAATGCGGCAGCAATCCTGGTACAGGGTGGCATACTCAACGAGCGCACGTaGCCATGCCTCAGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: KYCYTQWNAAAILVQGGILNERT*PCLSSR
Trigger: GCGGGAGCTGAGGCATGGGCACGTGCGCTCGTTGAG...TATGCCACCCTGTACCAGGATTGCTGCCGCATTCCACTGGGTATAACAGTATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp TTTAGGGCGCTGGGCATGGGTAGCTTGAGGAGCCAGCCTCCTGGGCACTGTTTTAGGTACTGGTACTGCTaGTGCTGTTGGAGGAACACA +
Preference number: 4 (lower is better)
Translates to: FRALGMGSLRSQPPGHCFRYWYC*CCWRNT
Trigger: TGTGTTCCTCCAACAGCAGCAGCAGTACCAGTACCT...AAAACAGTGCCCAGGAGGCTGGCTCCTCAAGCTACCCATGCCCAGCGCCCTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp GGGGTCCCGTGGGCATTTATAGGGCTCAAGATAGAGGAAAAGGCAGCCGAGATCCTCCTGTGTCTTGCTTaGCAGGCGGCGATTTGCAGA +
Preference number: 4 (lower is better)
Translates to: GVPWAFIGLKIEEKAAEILLCLA*QAAICR
Trigger: TCTGCAAATCGCCGCCTGGCAAGCAAGACACAGGAG...GATCTCGGCTGCCTTTTCCTCTATCTTGAGCCCTATAAATGCCCACGGGACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp TTTGCTCCTCTCCCAAACCCTCCAGGTGGGAATGAAGACACTTATGCTAACAAGGCATTGCCCAGAGCCTaGTCCAGCAGCTCGGCACGC +
Preference number: 4 (lower is better)
Translates to: FAPLPNPPGGNEDTYANKALPRA*SSSSAR
Trigger: GCGTGCCGAGCTGCTGGAGCAGGCTCTGGGCAATGC...CTTGTTAGCATAAGTGTCTTCATTCCCACCTGGAGGGTTTGGGAGAGGAGCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp GGCATTTATAGGGCTCAAGATAGAGGAAAAGGCAGCCGAGATCCTGGGAATCGAGCACCTGCCTGTCTCTaGTGTGCACGCAGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: GIYRAQDRGKGSRDPGNRAPACL*CARRAL
Trigger: CAAGGCCCTGCGTGCACAGCAGAGACAGGCAGGTGC...TCGATTCCCAGGATCTCGGCTGCCTTTTCCTCTATCTTGAGCCCTATAAATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp GAATCCTCATTCTCCATAAGGCCCGGAGGAATGTGGGCTAAGAAGCAGAGTCTTACCCACCACTGCCACTaGTACCACCTGGGGCACCTG +
Preference number: 4 (lower is better)
Translates to: ESSFSIRPGGMWAKKQSLTHHCH*YHLGHL
Trigger: CAGGTGCCCCAGGTGGTAGCAGTGGCAGTGGTGGGT...AAGACTCTGCTTCTTAGCCCACATTCCTCCGGGCCTTATGGAGAATGAGGATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp CTGGCCTTCTGGATGGTTTCGGACAAAACTTTATGTGCTAGGTGGGAGTGGGAACTGGAGACCCACCACTaGCACTGCTACCACCTGGGG +
Preference number: 4 (lower is better)
Translates to: LAFWMVSDKTLCARWEWELETHH*HCYHLG
Trigger: CCCCAGGTGGTAGCAGTGGCAGTGGTGGGTCTCCAG...TTCCCACTCCCACCTAGCACATAAAGTTTTGTCCGAAACCATCCAGAAGGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249883.10
CDS-3UTR GCA 90 bp GGCATTTATAGGGCTCAAGATAGAGGAAAAGGCAGCCGAGATCCTGGGAATCGAGCCCTGGGTTCCTGCTaGCGCAGCCGCGAAAACAGA +
Preference number: 4 (lower is better)
Translates to: GIYRAQDRGKGSRDPGNRALGSC*RSRENR
Trigger: TCTGTTTTCGCGGCTGCGGCAGCAGGAACCCAGGGC...TCGATTCCCAGGATCTCGGCTGCCTTTTCCTCTATCTTGAGCCCTATAAATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp CCTCCTGGGCACTGTTTTGTGATGGGGGCTCCATTCAGAGGACTATTTGACTCTGGGTGCTCCCATCTCTaGTCCCGTGTTTGGCATGGG +
Preference number: 4 (lower is better)
Translates to: PPGHCFVMGAPFRGLFDSGCSHL*SRVWHG
Trigger: CCCATGCCAAACACGGGAGCAGAGATGGGAGCACCC...AGAGTCAAATAGTCCTCTGAATGGAGCCCCCATCACAAAACAGTGCCCAGGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp GGAGACACATCGGAACCTGCAGGCCTCAGTCTTCTGTTCCACAAGAAAGGGAATTTCTGGGGGTGCCGGTaGTCTCACAGCTCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: GDTSEPAGLSLLFHKKGNFWGCR*SHSSPL
Trigger: GAGAGGAGAGCTGTGAGAGCACCGGCACCCCCAGAA...ATTCCCTTTCTTGTGGAACAGAAGACTGAGGCCTGCAGGTTCCGATGTGTCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp GGGGTCCCGTGGGCATTTATAGGGCTCAAGATAGAGGAAAAGGCAGCCGAGATCCAAAGCATCTGGTGCTaGTTTAGGGCGCTGGGCATG +
Preference number: 4 (lower is better)
Translates to: GVPWAFIGLKIEEKAAEIQSIWC*FRALGM
Trigger: CATGCCCAGCGCCCTAAAGCAGCACCAGATGCTTTG...GATCTCGGCTGCCTTTTCCTCTATCTTGAGCCCTATAAATGCCCACGGGACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp GAGCTGTCAGTTGCTACCCCAGTAGCAGGCCTTGGGCAAGAAGTCAAGGCTGAAGCCTCAGAGAGCCGCTaGATTTCGCTTTCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: ELSVATPVAGLGQEVKAEASESR*ISLSSF
Trigger: GAAGCTGGAAAGCGAAATCCAGCGGCTCTCTGAGGC...TTCAGCCTTGACTTCTTGCCCAAGGCCTGCTACTGGGGTAGCAACTGACAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp GAGCTGTCAGTTGCTACCCCAGTAGCAGGCCTTGGGCAAGAAGTCAAGGCTGAACCATCTTGTTCCGCATaGTCTTCTCCAGGGCCTCAC +
Preference number: 4 (lower is better)
Translates to: ELSVATPVAGLGQEVKAEPSCSA*SSPGPH
Trigger: GTGAGGCCCTGGAGAAGACCATGCGGAACAAGATGG...TTCAGCCTTGACTTCTTGCCCAAGGCCTGCTACTGGGGTAGCAACTGACAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp GGCATTTATAGGGCTCAAGATAGAGGAAAAGGCAGCCGAGATCCTGGGAATCGAGCCACTGCTACCACCTaGGGCACCTGCCTGTCTCTG +
Preference number: 4 (lower is better)
Translates to: GIYRAQDRGKGSRDPGNRATATT*GTCLSL
Trigger: CAGAGACAGGCAGGTGCCCCAGGTGGTAGCAGTGGC...TCGATTCCCAGGATCTCGGCTGCCTTTTCCTCTATCTTGAGCCCTATAAATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp GGAGACACATCGGAACCTGCAGGCCTCAGTCTTCTGTTCCACAAGAAAGGGAATCTGCTGGGTGAGGGCTaGGGGGAATGTCGGATGAGA +
Preference number: 4 (lower is better)
Translates to: GDTSEPAGLSLLFHKKGNLLGEG*GECRMR
Trigger: TCTCATCCGACATTCCCCCCAGCCCTCACCCAGCAG...ATTCCCTTTCTTGTGGAACAGAAGACTGAGGCCTGCAGGTTCCGATGTGTCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp ACAAGACATCTCCAGTTTCTCAGAAAGAACTGGTACCGGGTAGGGCCACCGAAGAGCCGCGAAAACAGATaGCACCGACTTGGCAGGCCG +
Preference number: 4 (lower is better)
Translates to: TRHLQFLRKNWYRVGPPKSRENR*HRLGRP
Trigger: CGGCCTGCCAAGTCGGTGCCATCTGTTTTCGCGGCT...CTTCGGTGGCCCTACCCGGTACCAGTTCTTTCTGAGAAACTGGAGATGTCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp GAATCCTCATTCTCCATAAGGCCCGGAGGAATGTGGGCTAAGAAGCAGAGTCTTCTCCCGTGTTTGGCATaGGCAGCAGGGGGAGCTGTG +
Preference number: 4 (lower is better)
Translates to: ESSFSIRPGGMWAKKQSLLPCLA*AAGGAV
Trigger: CACAGCTCCCCCTGCTGCCCATGCCAAACACGGGAG...AAGACTCTGCTTCTTAGCCCACATTCCTCCGGGCCTTATGGAGAATGAGGATTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp GGCATTTATAGGGCTCAAGATAGAGGAAAAGGCAGCCGAGATCCTGGGAATCGAGTGAACCAGTCCACCTaGTGTCCACGGGCAGCCGTC +
Preference number: 4 (lower is better)
Translates to: GIYRAQDRGKGSRDPGNRVNQST*CPRAAV
Trigger: GACGGCTGCCCGTGGACACCAGGTGGACTGGTTCAC...TCGATTCCCAGGATCTCGGCTGCCTTTTCCTCTATCTTGAGCCCTATAAATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp GAATCCTCATTCTCCATAAGGCCCGGAGGAATGTGGGCTAAGAAGCAGAGTCTTCCACCGAAGCCCACCTaGGGGCATGGCAGATGTCTG +
Preference number: 4 (lower is better)
Translates to: ESSFSIRPGGMWAKKQSLPPKPT*GHGRCL
Trigger: CAGACATCTGCCATGCCCCCAGGTGGGCTTCGGTGG...AAGACTCTGCTTCTTAGCCCACATTCCTCCGGGCCTTATGGAGAATGAGGATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp GCAGAGGGAGCTCAGCTCCTTTCTGAGCTGTCAGTTGCTACCCCAGTAGCAGGCCAATTCCAAAGCATCTaGTGCTGCTTTAGGGCGCTG +
Preference number: 4 (lower is better)
Translates to: AEGAQLLSELSVATPVAGQFQSI*CCFRAL
Trigger: CAGCGCCCTAAAGCAGCACCAGATGCTTTGGAATTG...GCCTGCTACTGGGGTAGCAACTGACAGCTCAGAAAGGAGCTGAGCTCCCTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp TTTAGGGCGCTGGGCATGGGTAGCTTGAGGAGCCAGCCTCCTGGGCACTGTTTTCAATTCCAAAGCATCTaGTGCTGCTTTAGGGCGCTG +
Preference number: 4 (lower is better)
Translates to: FRALGMGSLRSQPPGHCFQFQSI*CCFRAL
Trigger: CAGCGCCCTAAAGCAGCACCAGATGCTTTGGAATTG...AAAACAGTGCCCAGGAGGCTGGCTCCTCAAGCTACCCATGCCCAGCGCCCTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp CTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGAATCCTGGTACAGGGTaGCATAACAAAACAGCCATG +
Preference number: 4 (lower is better)
Translates to: LGKGTEQRLTGLLKWLRVNPGTG*HNKTAM
Trigger: CATGGCTGTTTTGTTATGCCACCCTGTACCAGGATT...CACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp CAGCCTCCTGGGCACTGTTTTGTGATGGGGGCTCCATTCAGAGGACTATTTGACCCTCTGCATGGTGCCTaGCCTTCTGGATGGTTTCGG +
Preference number: 4 (lower is better)
Translates to: QPPGHCFVMGAPFRGLFDPLHGA*PSGWFR
Trigger: CCGAAACCATCCAGAAGGCCAGGCACCATGCAGAGG...GTCAAATAGTCCTCTGAATGGAGCCCCCATCACAAAACAGTGCCCAGGAGGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249883.10
CDS-3UTR TCA 90 bp GGAGACACATCGGAACCTGCAGGCCTCAGTCTTCTGTTCCACAAGAAAGGGAATCTGCTTTCCATCTCCTaGTGCCTGTGGCCACCAGTG +
Preference number: 4 (lower is better)
Translates to: GDTSEPAGLSLLFHKKGNLLSIS*CLWPPV
Trigger: CACTGGTGGCCACAGGCATCAGGAGATGGAAAGCAG...ATTCCCTTTCTTGTGGAACAGAAGACTGAGGCCTGCAGGTTCCGATGTGTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR TCA 90 bp GGGGTCCCGTGGGCATTTATAGGGCTCAAGATAGAGGAAAAGGCAGCCGAGATCGCTGCTGAAGGACCTTaGTCACTGCATCCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: GVPWAFIGLKIEEKAAEIAAEGP*SLHPSP
Trigger: TGGAGAAGGATGCAGTGATCAAGGTCCTTCAGCAGC...GATCTCGGCTGCCTTTTCCTCTATCTTGAGCCCTATAAATGCCCACGGGACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR TCA 90 bp ACAAGACATCTCCAGTTTCTCAGAAAGAACTGGTACCGGGTAGGGCCACCGAAGCTCCTGGAGCGCTGCTaGAGGACCTTGATCACTGCA +
Preference number: 4 (lower is better)
Translates to: TRHLQFLRKNWYRVGPPKLLERC*RTLITA
Trigger: TGCAGTGATCAAGGTCCTTCAGCAGCGCTCCAGGAG...CTTCGGTGGCCCTACCCGGTACCAGTTCTTTCTGAGAAACTGGAGATGTCTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR TCA 90 bp AGGCAGCCGAGATCCTGGGAATCGAGCAGCTTTAACATCCACGGGCCAGGAACTTATCTCCACCATGTCTaGCAAGTCCTGGACTCTGGA +
Preference number: 4 (lower is better)
Translates to: RQPRSWESSSFNIHGPGTYLHHV*QVLDSG
Trigger: TCCAGAGTCCAGGACTTGTCAGACATGGTGGAGATA...AGTTCCTGGCCCGTGGATGTTAAAGCTGCTCGATTCCCAGGATCTCGGCTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR TCA 90 bp AAATACTGTTATACCCAGTGGAATGCGGCAGCAATCCTGGTACAGGGTGGCATACACTCCCTCCCTGCCTaGCTGACAACTGGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: KYCYTQWNAAAILVQGGIHSLPA*LTTGRA
Trigger: TGCCCTGCCAGTTGTCAGTCAGGCAGGGAGGGAGTG...TATGCCACCCTGTACCAGGATTGCTGCCGCATTCCACTGGGTATAACAGTATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR TCA 90 bp GAGCTGTCAGTTGCTACCCCAGTAGCAGGCCTTGGGCAAGAAGTCAAGGCTGAAAAGGCAGTGAGGAACTaGAGAGCAGATGACGTTGGC +
Preference number: 4 (lower is better)
Translates to: ELSVATPVAGLGQEVKAEKAVRN*RADDVG
Trigger: GCCAACGTCATCTGCTCTTCAGTTCCTCACTGCCTT...TTCAGCCTTGACTTCTTGCCCAAGGCCTGCTACTGGGGTAGCAACTGACAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR TCA 90 bp AGGCAGCCGAGATCCTGGGAATCGAGCAGCTTTAACATCCACGGGCCAGGAACTATCCCAAGAAGGCAGTaGGGAACTGAAGAGCAGATG +
Preference number: 4 (lower is better)
Translates to: RQPRSWESSSFNIHGPGTIPRRQ*GTEEQM
Trigger: CATCTGCTCTTCAGTTCCTCACTGCCTTCTTGGGAT...AGTTCCTGGCCCGTGGATGTTAAAGCTGCTCGATTCCCAGGATCTCGGCTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR TCA 90 bp CCTGGGCACTGTTTTGTGATGGGGGCTCCATTCAGAGGACTATTTGACTCTTGTCACGGGCCAGGAACTTaGGGAGGAGGCATAACTGGG +
Preference number: 4 (lower is better)
Translates to: PGHCFVMGAPFRGLFDSCHGPGT*GGGITG
Trigger: CCCAGTTATGCCTCCTCCTCAAGTTCCTGGCCCGTG...ACAAGAGTCAAATAGTCCTCTGAATGGAGCCCCCATCACAAAACAGTGCCCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR TCA 90 bp CAGCCTCCTGGGCACTGTTTTGTGATGGGGGCTCCATTCAGAGGACTATTTGACCTGGGCACTGTTTTGTaGTGGGGGCTCCATTCAGAG +
Preference number: 4 (lower is better)
Translates to: QPPGHCFVMGAPFRGLFDLGTVL*WGLHSE
Trigger: CTCTGAATGGAGCCCCCATCACAAAACAGTGCCCAG...GTCAAATAGTCCTCTGAATGGAGCCCCCATCACAAAACAGTGCCCAGGAGGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR TCA 90 bp GGGGTCCCGTGGGCATTTATAGGGCTCAAGATAGAGGAAAAGGCAGCCGAGATCGTGGCCGAACAAAGCTaGTTAGAACACAGCCCTACC +
Preference number: 4 (lower is better)
Translates to: GVPWAFIGLKIEEKAAEIVAEQS*LEHSPT
Trigger: GGTAGGGCTGTGTTCTAATCAGCTTTGTTCGGCCAC...GATCTCGGCTGCCTTTTCCTCTATCTTGAGCCCTATAAATGCCCACGGGACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249883.10
CDS-3UTR TCA 90 bp CAAAGCATCTGGTGCTGCTTTAGGGCGCTGGGCATGGGTAGCTTGAGGAGCCAGGAACATGCACATTCTTaGATGTCCTCTGCATGGTGC +
Preference number: 4 (lower is better)
Translates to: QSIWCCFRALGMGSLRSQEHAHS*MSSAWC
Trigger: GCACCATGCAGAGGACATTCAAGAATGTGCATGTTC...CTGGCTCCTCAAGCTACCCATGCCCAGCGCCCTAAAGCAGCACCAGATGCTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249883.10
CDS-3UTR GCA 90 bp CCTGGGCACTGTTTTGTGATGGGGGCTCCATTCAGAGGACTATTTGACTCTTGTGCGTCTCAGTCAGGTTaGCGTAGCGCAGCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: PGHCFVMGAPFRGLFDSCASQSG*RSAAAP
Trigger: AGGAGCAGCTGCGCTACGGCAACCTGACTGAGACGC...ACAAGAGTCAAATAGTCCTCTGAATGGAGCCCCCATCACAAAACAGTGCCCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp GAATCCTCATTCTCCATAAGGCCCGGAGGAATGTGGGCTAAGAAGCAGAGTCTTGGGCCTCCTGTGTCTTaGTTGCCAGGCGGCGATTTG +
Preference number: 4 (lower is better)
Translates to: ESSFSIRPGGMWAKKQSLGPPVS*LPGGDL
Trigger: CAAATCGCCGCCTGGCAAGCAAGACACAGGAGGCCC...AAGACTCTGCTTCTTAGCCCACATTCCTCCGGGCCTTATGGAGAATGAGGATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp GGAGACACATCGGAACCTGCAGGCCTCAGTCTTCTGTTCCACAAGAAAGGGAATTGCCTGTCTCTGCTGTaGACGCAGGGCCTTGAGTTC +
Preference number: 4 (lower is better)
Translates to: GDTSEPAGLSLLFHKKGNCLSLL*TQGLEF
Trigger: GAACTCAAGGCCCTGCGTGCACAGCAGAGACAGGCA...ATTCCCTTTCTTGTGGAACAGAAGACTGAGGCCTGCAGGTTCCGATGTGTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp AAATACTGTTATACCCAGTGGAATGCGGCAGCAATCCTGGTACAGGGTGGCATAACCACCTGGGGCACCTaGCTGTCTCTGCTGTGCACG +
Preference number: 4 (lower is better)
Translates to: KYCYTQWNAAAILVQGGITTWGT*LSLLCT
Trigger: CGTGCACAGCAGAGACAGGCAGGTGCCCCAGGTGGT...TATGCCACCCTGTACCAGGATTGCTGCCGCATTCCACTGGGTATAACAGTATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp CAAGAGGCTGGTGGTGGGGGTCCCGTGGGCATTTATAGGGCTCAAGATAGAGGAGGAGCACCTTTAACCTaGTTTCCATCTCCTGATGCC +
Preference number: 4 (lower is better)
Translates to: QEAGGGGPVGIYRAQDRGGAPLT*FPSPDA
Trigger: GGCATCAGGAGATGGAAAGCAGGTTAAAGGTGCTCC...TCCTCTATCTTGAGCCCTATAAATGCCCACGGGACCCCCACCACCAGCCTCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp ACAAGACATCTCCAGTTTCTCAGAAAGAACTGGTACCGGGTAGGGCCACCGAAGCCGAGCAGGGGCGTCTaGTGTTTGTCGCTCACTAGA +
Preference number: 4 (lower is better)
Translates to: TRHLQFLRKNWYRVGPPKPSRGV*CLSLTR
Trigger: TCTAGTGAGCGACAAACAGCAGACGCCCCTGCTCGG...CTTCGGTGGCCCTACCCGGTACCAGTTCTTTCTGAGAAACTGGAGATGTCTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp AAATACTGTTATACCCAGTGGAATGCGGCAGCAATCCTGGTACAGGGTGGCATAGGCCCTCAGTCTGGGTaGTCCCATCTCTGCTCCCGT +
Preference number: 4 (lower is better)
Translates to: KYCYTQWNAAAILVQGGIGPQSG*SHLCSR
Trigger: ACGGGAGCAGAGATGGGAGCACCCAGACTGAGGGCC...TATGCCACCCTGTACCAGGATTGCTGCCGCATTCCACTGGGTATAACAGTATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp GAGAACAATATGGCTGACTTGATTAGTGAACCAGTCCACCTGGTGTCCACGGGCCTGCTCTCTGGCTACTaGTGCACCCCAGAAGGCTGT +
Preference number: 4 (lower is better)
Translates to: ENNMADLISEPVHLVSTGLLSGY*CTPEGC
Trigger: ACAGCCTTCTGGGGTGCAGCAGTAGCCAGAGAGCAG...GCCCGTGGACACCAGGTGGACTGGTTCACTAATCAAGTCAGCCATATTGTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp CAGCCTCCTGGGCACTGTTTTGTGATGGGGGCTCCATTCAGAGGACTATTTGACTTCCAAAGCATCTGGTaGTGCTTTAGGGCGCTGGGC +
Preference number: 4 (lower is better)
Translates to: QPPGHCFVMGAPFRGLFDFQSIW*CFRALG
Trigger: GCCCAGCGCCCTAAAGCAGCACCAGATGCTTTGGAA...GTCAAATAGTCCTCTGAATGGAGCCCCCATCACAAAACAGTGCCCAGGAGGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp GAGAACAATATGGCTGACTTGATTAGTGAACCAGTCCACCTGGTGTCCACGGGCCTGCTGCTAGCAGGCTaGCATGTGGGTGTTTCACCC +
Preference number: 4 (lower is better)
Translates to: ENNMADLISEPVHLVSTGLLLAG*HVGVSP
Trigger: GGGTGAAACACCCACATGGCAGCCTGCTAGCAGCAG...GCCCGTGGACACCAGGTGGACTGGTTCACTAATCAAGTCAGCCATATTGTTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp GACCAAACTGACAGGATGTTCCAGGGACAGGAGCTGTGGAGCCACTTCAAGAGGATGTCCTCTGCATGGTaGCTGGCCTTCTGGATGGTT +
Preference number: 4 (lower is better)
Translates to: DQTDRMFQGQELWSHFKRMSSAW*LAFWMV
Trigger: AACCATCCAGAAGGCCAGGCACCATGCAGAGGACAT...CCTCTTGAAGTGGCTCCACAGCTCCTGTCCCTGGAACATCCTGTCAGTTTGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249883.10
CDS-3UTR GCA 90 bp AAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGCGGTGGCTAAGAACATaGACATTCTTGAATGTCCTC +
Preference number: 4 (lower is better)
Translates to: KGTEQRLTGLLKWLRVAQRWLRT*TFLNVL
Trigger: GAGGACATTCAAGAATGTGCATGTTCTTAGCCACCG...CTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249883.10
CDS-3UTR GCA 90 bp CCTCCTGGGCACTGTTTTGTGATGGGGGCTCCATTCAGAGGACTATTTGACTCTTGGCTCCTCTGTGGGTaGTCTGTCTGTAGTCAGCCG +
Preference number: 4 (lower is better)
Translates to: PPGHCFVMGAPFRGLFDSWLLCG*SVCSQP
Trigger: CGGCTGACTACAGACAGAGCACCCACAGAGGAGCCA...AGAGTCAAATAGTCCTCTGAATGGAGCCCCCATCACAAAACAGTGCCCAGGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp GGGGTCCCGTGGGCATTTATAGGGCTCAAGATAGAGGAAAAGGCAGCCGAGATCGTCCTCATGCTTCTTTaGCTTGCACACAGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: GVPWAFIGLKIEEKAAEIVLMLL*LAHSCL
Trigger: CAGGCAGCTGTGTGCAAGCCAAAGAAGCATGAGGAC...GATCTCGGCTGCCTTTTCCTCTATCTTGAGCCCTATAAATGCCCACGGGACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp CTCCAGGTGGGAATGAAGACACTTATGCTAACAAGACATCTCCAGTTTCTCAGATGGTTCTCACCGCCCTaGTGCTCCTGGCCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: LQVGMKTLMLTRHLQFLRWFSPP*CSWPWG
Trigger: GCCCCAGGGCCAGGAGCACCAGGGCGGTGAGAACCA...TCTGAGAAACTGGAGATGTCTTGTTAGCATAAGTGTCTTCATTCCCACCTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp TTTGCTCCTCTCCCAAACCCTCCAGGTGGGAATGAAGACACTTATGCTAACAAGGCTCCTCTCCCTTGCTaGGCTGTGGGCATAGCCGGT +
Preference number: 4 (lower is better)
Translates to: FAPLPNPPGGNEDTYANKAPLPC*AVGIAG
Trigger: ACCGGCTATGCCCACAGCCCAGCAAGGGAGAGGAGC...CTTGTTAGCATAAGTGTCTTCATTCCCACCTGGAGGGTTTGGGAGAGGAGCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp CTGGCCTTCTGGATGGTTTCGGACAAAACTTTATGTGCTAGGTGGGAGTGGGAATGGCCTCCTCATAGGTaGGCAGCTCCTCTCCCTTGC +
Preference number: 4 (lower is better)
Translates to: LAFWMVSDKTLCARWEWEWPPHR*AAPLPC
Trigger: GCAAGGGAGAGGAGCTGCCCACCTATGAGGAGGCCA...TTCCCACTCCCACCTAGCACATAAAGTTTTGTCCGAAACCATCCAGAAGGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249883.10
CDS-3UTR CCA 90 bp GGAGACACATCGGAACCTGCAGGCCTCAGTCTTCTGTTCCACAAGAAAGGGAATACTGCGAGTGGGCTTTaGCCTCCTCATAGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: GDTSEPAGLSLLFHKKGNTASGL*PPHRWA
Trigger: TGCCCACCTATGAGGAGGCCAAAGCCCACTCGCAGT...ATTCCCTTTCTTGTGGAACAGAAGACTGAGGCCTGCAGGTTCCGATGTGTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp TTTGCTCCTCTCCCAAACCCTCCAGGTGGGAATGAAGACACTTATGCTAACAAGGCGGGCACGGTACCGTaGGTCAGTGACAGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: FAPLPNPPGGNEDTYANKAGTVP*VSDSSG
Trigger: ACCACTGCTGTCACTGACCCACGGTACCGTGCCCGC...CTTGTTAGCATAAGTGTCTTCATTCCCACCTGGAGGGTTTGGGAGAGGAGCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp AAATACTGTTATACCCAGTGGAATGCGGCAGCAATCCTGGTACAGGGTGGCATAGAGCTCAGGGGGCCATaGCCGAGAGCAGCTGGATGT +
Preference number: 4 (lower is better)
Translates to: KYCYTQWNAAAILVQGGIELRGP*PRAAGC
Trigger: ACATCCAGCTGCTCTCGGCCATGGCCCCCTGAGCTC...TATGCCACCCTGTACCAGGATTGCTGCCGCATTCCACTGGGTATAACAGTATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp CCTGGGCACTGTTTTGTGATGGGGGCTCCATTCAGAGGACTATTTGACTCTTGTGCTTGGAGGAGGCTCTaGTCAGGCTCTCATGGGCCT +
Preference number: 4 (lower is better)
Translates to: PGHCFVMGAPFRGLFDSCAWRRL*SGSHGP
Trigger: AGGCCCATGAGAGCCTGACCAGAGCCTCCTCCAAGC...ACAAGAGTCAAATAGTCCTCTGAATGGAGCCCCCATCACAAAACAGTGCCCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp ATGAAAGGGGAAAAATGCCAGCCACATCCTCATTCCAACTCTATCCTTAATGCAGCCGCTGGTCCTCGATaGCGCCGCGCAGCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: MKGEKCQPHPHSNSILNAAAGPR*RRAAVP
Trigger: TGGCACTGCTGCGCGGCGCCATCGAGGACCAGCGGC...TGCATTAAGGATAGAGTTGGAATGAGGATGTGGCTGGCATTTTTCCCCTTTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249883.10
CDS-3UTR CCA 90 bp TTTGCTCCTCTCCCAAACCCTCCAGGTGGGAATGAAGACACTTATGCTAACAAGCTCTGCTCCCGTGTTTaGCATGGGCAGCAGGGGGAG +
Preference number: 4 (lower is better)
Translates to: FAPLPNPPGGNEDTYANKLCSRV*HGQQGE
Trigger: CTCCCCCTGCTGCCCATGCCAAACACGGGAGCAGAG...CTTGTTAGCATAAGTGTCTTCATTCCCACCTGGAGGGTTTGGGAGAGGAGCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp GGAGACACATCGGAACCTGCAGGCCTCAGTCTTCTGTTCCACAAGAAAGGGAATCACCCACTCCCACTGTaGATAACCACAGCGTGTGGC +
Preference number: 4 (lower is better)
Translates to: GDTSEPAGLSLLFHKKGNHPLPL*ITTACG
Trigger: GCCACACGCTGTGGTTATCCACAGTGGGAGTGGGTG...ATTCCCTTTCTTGTGGAACAGAAGACTGAGGCCTGCAGGTTCCGATGTGTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249883.10
CDS-3UTR TCA 90 bp GAATCCTCATTCTCCATAAGGCCCGGAGGAATGTGGGCTAAGAAGCAGAGTCTTGGGCCTGCAGGATCCTaGCTTCAGCATGCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: ESSFSIRPGGMWAKKQSLGPAGS*LQHAGS
Trigger: ACTTCCAGCATGCTGAAGTCAGGATCCTGCAGGCCC...AAGACTCTGCTTCTTAGCCCACATTCCTCCGGGCCTTATGGAGAATGAGGATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR TCA 90 bp CTGGCCTTCTGGATGGTTTCGGACAAAACTTTATGTGCTAGGTGGGAGTGGGAACTGCTTTCCATCTCCTaGTGCCTGTGGCCACCAGTG +
Preference number: 4 (lower is better)
Translates to: LAFWMVSDKTLCARWEWELLSIS*CLWPPV
Trigger: CACTGGTGGCCACAGGCATCAGGAGATGGAAAGCAG...TTCCCACTCCCACCTAGCACATAAAGTTTTGTCCGAAACCATCCAGAAGGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249883.10
CDS-3UTR TCA 90 bp GAGCTGTCAGTTGCTACCCCAGTAGCAGGCCTTGGGCAAGAAGTCAAGGCTGAAATCCCAAGAAGGCAGTaGGGAACTGAAGAGCAGATG +
Preference number: 4 (lower is better)
Translates to: ELSVATPVAGLGQEVKAEIPRRQ*GTEEQM
Trigger: CATCTGCTCTTCAGTTCCTCACTGCCTTCTTGGGAT...TTCAGCCTTGACTTCTTGCCCAAGGCCTGCTACTGGGGTAGCAACTGACAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp AGGCAGCCGAGATCCTGGGAATCGAGCAGCTTTAACATCCACGGGCCAGGAACTCTTCCAGTGTCCTCATaGTTCTTTGGCTTGCACACA +
Preference number: 4 (lower is better)
Translates to: RQPRSWESSSFNIHGPGTLPVSS*FFGLHT
Trigger: TGTGTGCAAGCCAAAGAAGCATGAGGACACTGGAAG...AGTTCCTGGCCCGTGGATGTTAAAGCTGCTCGATTCCCAGGATCTCGGCTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp GAGCTGTCAGTTGCTACCCCAGTAGCAGGCCTTGGGCAAGAAGTCAAGGCTGAATCCCGGTTGAAGTCTTaGAGCCTCCTCATTTCACTG +
Preference number: 4 (lower is better)
Translates to: ELSVATPVAGLGQEVKAESRLKS*SLLISL
Trigger: CAGTGAAATGAGGAGGCTGCAAGACTTCAACCGGGA...TTCAGCCTTGACTTCTTGCCCAAGGCCTGCTACTGGGGTAGCAACTGACAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp GACCAAACTGACAGGATGTTCCAGGGACAGGAGCTGTGGAGCCACTTCAAGAGGTGCCAGGCGGCGATTTaGAGATTCCAATCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: DQTDRMFQGQELWSHFKRCQAAI*RFQSLS
Trigger: AGAGAGAGATTGGAATCTGCAAATCGCCGCCTGGCA...CCTCTTGAAGTGGCTCCACAGCTCCTGTCCCTGGAACATCCTGTCAGTTTGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp CCTCCTGGGCACTGTTTTGTGATGGGGGCTCCATTCAGAGGACTATTTGACTCTCTCCTGTGTCTTGCTTaGCAGGCGGCGATTTGCAGA +
Preference number: 4 (lower is better)
Translates to: PPGHCFVMGAPFRGLFDSLLCLA*QAAICR
Trigger: TCTGCAAATCGCCGCCTGGCAAGCAAGACACAGGAG...AGAGTCAAATAGTCCTCTGAATGGAGCCCCCATCACAAAACAGTGCCCAGGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp TTTGCTCCTCTCCCAAACCCTCCAGGTGGGAATGAAGACACTTATGCTAACAAGAGACGCAGCTCCAGCTaGTCCCGCTTCTCACAGGCT +
Preference number: 4 (lower is better)
Translates to: FAPLPNPPGGNEDTYANKRRSSS*SRFSQA
Trigger: AGCCTGTGAGAAGCGGGAGCAGCTGGAGCTGCGTCT...CTTGTTAGCATAAGTGTCTTCATTCCCACCTGGAGGGTTTGGGAGAGGAGCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp TTTGCTCCTCTCCCAAACCCTCCAGGTGGGAATGAAGACACTTATGCTAACAAGAGGGCCTTGAGTTCCTaGTCCAGGCGAGTCCGCAGA +
Preference number: 4 (lower is better)
Translates to: FAPLPNPPGGNEDTYANKRALSS*SRRVRR
Trigger: TCTGCGGACTCGCCTGGAGCAGGAACTCAAGGCCCT...CTTGTTAGCATAAGTGTCTTCATTCCCACCTGGAGGGTTTGGGAGAGGAGCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp CTGGCCTTCTGGATGGTTTCGGACAAAACTTTATGTGCTAGGTGGGAGTGGGAACCGAGCAGGGGCGTCTaGTGTTTGTCGCTCACTAGA +
Preference number: 4 (lower is better)
Translates to: LAFWMVSDKTLCARWEWEPSRGV*CLSLTR
Trigger: TCTAGTGAGCGACAAACAGCAGACGCCCCTGCTCGG...TTCCCACTCCCACCTAGCACATAAAGTTTTGTCCGAAACCATCCAGAAGGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249883.10
CDS-3UTR GCA 90 bp CCTCCTGGGCACTGTTTTGTGATGGGGGCTCCATTCAGAGGACTATTTGACTCTTGGCTCCTCTGTGGGTaGTCTGTCTGCTGTAGTCAG +
Preference number: 4 (lower is better)
Translates to: PPGHCFVMGAPFRGLFDSWLLCG*SVCCSQ
Trigger: CTGACTACAGCAGACAGAGCACCCACAGAGGAGCCA...AGAGTCAAATAGTCCTCTGAATGGAGCCCCCATCACAAAACAGTGCCCAGGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249883.10
CDS-3UTR GCA 90 bp CCTGGGCACTGTTTTGTGATGGGGGCTCCATTCAGAGGACTATTTGACTCTTGTCTGCTGCTAGCAGGCTaGCATGTGGGTGTTTCACCC +
Preference number: 4 (lower is better)
Translates to: PGHCFVMGAPFRGLFDSCLLLAG*HVGVSP
Trigger: GGGTGAAACACCCACATGGCAGCCTGCTAGCAGCAG...ACAAGAGTCAAATAGTCCTCTGAATGGAGCCCCCATCACAAAACAGTGCCCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp CTCCAGGTGGGAATGAAGACACTTATGCTAACAAGACATCTCCAGTTTCTCAGACTCAGGGCCTGCTGCTaGATGGCTAGCAGCGTGCGC +
Preference number: 4 (lower is better)
Translates to: LQVGMKTLMLTRHLQFLRLRACC*MASSVR
Trigger: GCGCACGCTGCTAGCCATCCAGCAGCAGGCCCTGAG...TCTGAGAAACTGGAGATGTCTTGTTAGCATAAGTGTCTTCATTCCCACCTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp GAATCCTCATTCTCCATAAGGCCCGGAGGAATGTGGGCTAAGAAGCAGAGTCTTAGCTGTGGGAAGCTGTaGGAGGAGCTCATGTGGCTG +
Preference number: 4 (lower is better)
Translates to: ESSFSIRPGGMWAKKQSLSCGKL*EELMWL
Trigger: CAGCCACATGAGCTCCTCCCACAGCTTCCCACAGCT...AAGACTCTGCTTCTTAGCCCACATTCCTCCGGGCCTTATGGAGAATGAGGATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp GAGAACAATATGGCTGACTTGATTAGTGAACCAGTCCACCTGGTGTCCACGGGCTACTGCTGCTGCTGTTaGAGGAACACAGGAGGCACC +
Preference number: 4 (lower is better)
Translates to: ENNMADLISEPVHLVSTGYCCCC*RNTGGT
Trigger: GGTGCCTCCTGTGTTCCTCCAACAGCAGCAGCAGTA...GCCCGTGGACACCAGGTGGACTGGTTCACTAATCAAGTCAGCCATATTGTTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp CCTCCTGGGCACTGTTTTGTGATGGGGGCTCCATTCAGAGGACTATTTGACTCTGCCTCAGAGAGCCGCTaGATTTCGCTTTCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: PPGHCFVMGAPFRGLFDSASESR*ISLSSF
Trigger: GAAGCTGGAAAGCGAAATCCAGCGGCTCTCTGAGGC...AGAGTCAAATAGTCCTCTGAATGGAGCCCCCATCACAAAACAGTGCCCAGGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp TTTGCTCCTCTCCCAAACCCTCCAGGTGGGAATGAAGACACTTATGCTAACAAGGCTTGGAGGAGGCTCTaGTCAGGCTCTCATGGGCCT +
Preference number: 4 (lower is better)
Translates to: FAPLPNPPGGNEDTYANKAWRRL*SGSHGP
Trigger: AGGCCCATGAGAGCCTGACCAGAGCCTCCTCCAAGC...CTTGTTAGCATAAGTGTCTTCATTCCCACCTGGAGGGTTTGGGAGAGGAGCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp GGAGACACATCGGAACCTGCAGGCCTCAGTCTTCTGTTCCACAAGAAAGGGAATACGGGCAGCCGTCCGTaGAAATTAGTTCCCCAAACC +
Preference number: 4 (lower is better)
Translates to: GDTSEPAGLSLLFHKKGNTGSRP*KLVPQT
Trigger: GGTTTGGGGAACTAATTTCCACGGACGGCTGCCCGT...ATTCCCTTTCTTGTGGAACAGAAGACTGAGGCCTGCAGGTTCCGATGTGTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp AAATACTGTTATACCCAGTGGAATGCGGCAGCAATCCTGGTACAGGGTGGCATAACTTCAAGAGGCTGGTaGTGGGGGTCCCGTGGGCAT +
Preference number: 4 (lower is better)
Translates to: KYCYTQWNAAAILVQGGITSRGW*WGSRGH
Trigger: ATGCCCACGGGACCCCCACCACCAGCCTCTTGAAGT...TATGCCACCCTGTACCAGGATTGCTGCCGCATTCCACTGGGTATAACAGTATTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp CTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGACACATCATGGTCTTTaGCAGAAAATGTTCACAGCA +
Preference number: 4 (lower is better)
Translates to: LGKGTEQRLTGLLKWLRVTHHGL*QKMFTA
Trigger: TGCTGTGAACATTTTCTGCCAAAGACCATGATGTGT...CACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp GGGGTCCCGTGGGCATTTATAGGGCTCAAGATAGAGGAAAAGGCAGCCGAGATCAAAGGAGGGAGGCGGTaGCTAAGAACATGCACATTC +
Preference number: 4 (lower is better)
Translates to: GVPWAFIGLKIEEKAAEIKGGRR*LRTCTF
Trigger: GAATGTGCATGTTCTTAGCCACCGCCTCCCTCCTTT...GATCTCGGCTGCCTTTTCCTCTATCTTGAGCCCTATAAATGCCCACGGGACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249883.10
CDS-3UTR CCA 90 bp CAAAGCATCTGGTGCTGCTTTAGGGCGCTGGGCATGGGTAGCTTGAGGAGCCAGAACCACTGGGCTGCTTaGTTTCTCATTCTCAAAACC +
Preference number: 4 (lower is better)
Translates to: QSIWCCFRALGMGSLRSQNHWAA*FLILKT
Trigger: GGTTTTGAGAATGAGAAACCAAGCAGCCCAGTGGTT...CTGGCTCCTCAAGCTACCCATGCCCAGCGCCCTAAAGCAGCACCAGATGCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514516.5
CDS-3UTR TCA 90 bp TTTGCTCCTCTCCCAAACCCTCCAGGTGGGAATGAAGACACTTATGCTAACAAGGGGCCTGCAGGATCCTaGCTTCAGCATGCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: FAPLPNPPGGNEDTYANKGPAGS*LQHAGS
Trigger: ACTTCCAGCATGCTGAAGTCAGGATCCTGCAGGCCC...CTTGTTAGCATAAGTGTCTTCATTCCCACCTGGAGGGTTTGGGAGAGGAGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR TCA 90 bp AAATACTGTTATACCCAGTGGAATGCGGCAGCAATCCTGGTACAGGGTGGCATACTCCTGGAGCGCTGCTaGAGGACCTTGATCACTGCA +
Preference number: 4 (lower is better)
Translates to: KYCYTQWNAAAILVQGGILLERC*RTLITA
Trigger: TGCAGTGATCAAGGTCCTTCAGCAGCGCTCCAGGAG...TATGCCACCCTGTACCAGGATTGCTGCCGCATTCCACTGGGTATAACAGTATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR TCA 90 bp ACCACAGCGTGTGGCCGAACAAAGCTGATTAGAACACAGCCCTACCTCGGGAGGACAATATGGCTGACTTaGTTAGTGAACCAGTCCACC +
Preference number: 4 (lower is better)
Translates to: TTACGRTKLIRTQPYLGRTIWLT*LVNQST
Trigger: GGTGGACTGGTTCACTAATCAAGTCAGCCATATTGT...CCTCCCGAGGTAGGGCTGTGTTCTAATCAGCTTTGTTCGGCCACACGCTGTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249883.10
CDS-3UTR TCA 90 bp AGGCAGCCGAGATCCTGGGAATCGAGCAGCTTTAACATCCACGGGCCAGGAACTACAATATGGCTGACTTaGTTAGTGAACCAGTCCACC +
Preference number: 4 (lower is better)
Translates to: RQPRSWESSSFNIHGPGTTIWLT*LVNQST
Trigger: GGTGGACTGGTTCACTAATCAAGTCAGCCATATTGT...AGTTCCTGGCCCGTGGATGTTAAAGCTGCTCGATTCCCAGGATCTCGGCTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR TCA 90 bp CAAAGCATCTGGTGCTGCTTTAGGGCGCTGGGCATGGGTAGCTTGAGGAGCCAGTCTATCTTGGGTCCTTaGAGAGATTGGACTATGACT +
Preference number: 4 (lower is better)
Translates to: QSIWCCFRALGMGSLRSQSILGP*RDWTMT
Trigger: AGTCATAGTCCAATCTCTTCAAGGACCCAAGATAGA...CTGGCTCCTCAAGCTACCCATGCCCAGCGCCCTAAAGCAGCACCAGATGCTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249883.10
CDS-3UTR TCA 90 bp ACCACAGCGTGTGGCCGAACAAAGCTGATTAGAACACAGCCCTACCTCGGGAGGAGCAATATGCTTTCCTaGGCATCAGGAAAGAGTGGT +
Preference number: 4 (lower is better)
Translates to: TTACGRTKLIRTQPYLGRSNMLS*ASGKSG
Trigger: ACCACTCTTTCCTGATGCTCAGGAAAGCATATTGCT...CCTCCCGAGGTAGGGCTGTGTTCTAATCAGCTTTGTTCGGCCACACGCTGTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249883.10
CDS-3UTR GCA 90 bp TTTGCTCCTCTCCCAAACCCTCCAGGTGGGAATGAAGACACTTATGCTAACAAGGTAGAGGGTGTTCTCTaGCAGGTGGTTCTCACCGCC +
Preference number: 4 (lower is better)
Translates to: FAPLPNPPGGNEDTYANKVEGVL*QVVLTA
Trigger: GGCGGTGAGAACCACCTGGCAGAGAACACCCTCTAC...CTTGTTAGCATAAGTGTCTTCATTCCCACCTGGAGGGTTTGGGAGAGGAGCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp CAGCCTCCTGGGCACTGTTTTGTGATGGGGGCTCCATTCAGAGGACTATTTGACTACTGGTACTGCTGCTaGTGTTGGAGGAACACAGGA +
Preference number: 4 (lower is better)
Translates to: QPPGHCFVMGAPFRGLFDYWYCC*CWRNTG
Trigger: TCCTGTGTTCCTCCAACAGCAGCAGCAGTACCAGTA...GTCAAATAGTCCTCTGAATGGAGCCCCCATCACAAAACAGTGCCCAGGAGGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp AAATACTGTTATACCCAGTGGAATGCGGCAGCAATCCTGGTACAGGGTGGCATATGCCTGTCTCTGCTGTaGACGCAGGGCCTTGAGTTC +
Preference number: 4 (lower is better)
Translates to: KYCYTQWNAAAILVQGGICLSLL*TQGLEF
Trigger: GAACTCAAGGCCCTGCGTGCACAGCAGAGACAGGCA...TATGCCACCCTGTACCAGGATTGCTGCCGCATTCCACTGGGTATAACAGTATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp CCTGGGCACTGTTTTGTGATGGGGGCTCCATTCAGAGGACTATTTGACTCTTGTGCATCCATGGCAAACTaGCTCATGGCACGTTCCTCC +
Preference number: 4 (lower is better)
Translates to: PGHCFVMGAPFRGLFDSCASMAN*LMARSS
Trigger: GGAGGAACGTGCCATGAGGCAGTTTGCCATGGATGC...ACAAGAGTCAAATAGTCCTCTGAATGGAGCCCCCATCACAAAACAGTGCCCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp GACCAAACTGACAGGATGTTCCAGGGACAGGAGCTGTGGAGCCACTTCAAGAGGAAGGACCTTGATCACTaGATCCTTCTCCAGGATCTG +
Preference number: 4 (lower is better)
Translates to: DQTDRMFQGQELWSHFKRKDLDH*ILLQDL
Trigger: CAGATCCTGGAGAAGGATGCAGTGATCAAGGTCCTT...CCTCTTGAAGTGGCTCCACAGCTCCTGTCCCTGGAACATCCTGTCAGTTTGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp TTTGCTCCTCTCCCAAACCCTCCAGGTGGGAATGAAGACACTTATGCTAACAAGAGAGTCTTCTGGGGGTaGCGGTGCTCTCACAGCTCT +
Preference number: 4 (lower is better)
Translates to: FAPLPNPPGGNEDTYANKRVFWG*RCSHSS
Trigger: AGAGCTGTGAGAGCACCGGCACCCCCAGAAGACTCT...CTTGTTAGCATAAGTGTCTTCATTCCCACCTGGAGGGTTTGGGAGAGGAGCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp GAGTGTCTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCAAAGTCTCACCTGTaGAAAGACATCACTTTTAAT +
Preference number: 4 (lower is better)
Translates to: ECLAGERDGAAVDGAAEMAKSHL*KDITFN
Trigger: ATTAAAAGTGATGTCTTTGCACAGGTGAGACTTTGC...CATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAGACACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000249883.10
CDS-3UTR CCA 90 bp AAATACTGTTATACCCAGTGGAATGCGGCAGCAATCCTGGTACAGGGTGGCATAAGCTGTGGGAAGCTGTaGGAGGAGCTCATGTGGCTG +
Preference number: 4 (lower is better)
Translates to: KYCYTQWNAAAILVQGGISCGKL*EELMWL
Trigger: CAGCCACATGAGCTCCTCCCACAGCTTCCCACAGCT...TATGCCACCCTGTACCAGGATTGCTGCCGCATTCCACTGGGTATAACAGTATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp CTGGCCTTCTGGATGGTTTCGGACAAAACTTTATGTGCTAGGTGGGAGTGGGAATACTGCTGCTGCTGTTaGAGGAACACAGGAGGCACC +
Preference number: 4 (lower is better)
Translates to: LAFWMVSDKTLCARWEWEYCCCC*RNTGGT
Trigger: GGTGCCTCCTGTGTTCCTCCAACAGCAGCAGCAGTA...TTCCCACTCCCACCTAGCACATAAAGTTTTGTCCGAAACCATCCAGAAGGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249883.10
CDS-3UTR CCA 90 bp GACCAAACTGACAGGATGTTCCAGGGACAGGAGCTGTGGAGCCACTTCAAGAGGTGGCAAACTGCCTCATaGCACGTTCCTCCAAATACT +
Preference number: 4 (lower is better)
Translates to: DQTDRMFQGQELWSHFKRWQTAS*HVPPNT
Trigger: AGTATTTGGAGGAACGTGCCATGAGGCAGTTTGCCA...CCTCTTGAAGTGGCTCCACAGCTCCTGTCCCTGGAACATCCTGTCAGTTTGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp CAGCCTCCTGGGCACTGTTTTGTGATGGGGGCTCCATTCAGAGGACTATTTGACTCCAGGATCTGGGCATaGAGCACCTTTAACCTGCTT +
Preference number: 4 (lower is better)
Translates to: QPPGHCFVMGAPFRGLFDSRIWA*STFNLL
Trigger: AAGCAGGTTAAAGGTGCTCCATGCCCAGATCCTGGA...GTCAAATAGTCCTCTGAATGGAGCCCCCATCACAAAACAGTGCCCAGGAGGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp CCTCCTGGGCACTGTTTTGTGATGGGGGCTCCATTCAGAGGACTATTTGACTCTAGGCCCGGAGGAATGTaGGCTAAGAAGCAGAGTCTT +
Preference number: 4 (lower is better)
Translates to: PPGHCFVMGAPFRGLFDSRPGGM*AKKQSL
Trigger: AAGACTCTGCTTCTTAGCCCACATTCCTCCGGGCCT...AGAGTCAAATAGTCCTCTGAATGGAGCCCCCATCACAAAACAGTGCCCAGGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp TTTGCTCCTCTCCCAAACCCTCCAGGTGGGAATGAAGACACTTATGCTAACAAGGAGGAGCCAGCCTCCTaGGCACTGTTTTGTGATGGG +
Preference number: 4 (lower is better)
Translates to: FAPLPNPPGGNEDTYANKEEPAS*ALFCDG
Trigger: CCCATCACAAAACAGTGCCCAGGAGGCTGGCTCCTC...CTTGTTAGCATAAGTGTCTTCATTCCCACCTGGAGGGTTTGGGAGAGGAGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp TGTCTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTTACAGACACACATCATaGTCTTTGGCAGAAAATGTT +
Preference number: 4 (lower is better)
Translates to: CLAGERDGAAVDGAAEMAYRHTS*SLAENV
Trigger: AACATTTTCTGCCAAAGACCATGATGTGTGTCTGTA...AGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp AGTGTCTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGTACAGACACACATCATaGTCTTTGGCAGAAAATGTT +
Preference number: 4 (lower is better)
Translates to: SVWLGKGTEQRLTGLLKWYRHTS*SLAENV
Trigger: AACATTTTCTGCCAAAGACCATGATGTGTGTCTGTA...CCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAGACACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp GAGCTGTCAGTTGCTACCCCAGTAGCAGGCCTTGGGCAAGAAGTCAAGGCTGAATACTGTTATACCCAGTaGAATGCGGCAGCAATCCTG +
Preference number: 4 (lower is better)
Translates to: ELSVATPVAGLGQEVKAEYCYTQ*NAAAIL
Trigger: CAGGATTGCTGCCGCATTCCACTGGGTATAACAGTA...TTCAGCCTTGACTTCTTGCCCAAGGCCTGCTACTGGGGTAGCAACTGACAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR TCA 90 bp ACAAGACATCTCCAGTTTCTCAGAAAGAACTGGTACCGGGTAGGGCCACCGAAGTATCTCCACCATGTCTaGCAAGTCCTGGACTCTGGA +
Preference number: 4 (lower is better)
Translates to: TRHLQFLRKNWYRVGPPKYLHHV*QVLDSG
Trigger: TCCAGAGTCCAGGACTTGTCAGACATGGTGGAGATA...CTTCGGTGGCCCTACCCGGTACCAGTTCTTTCTGAGAAACTGGAGATGTCTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR TCA 90 bp AAATACTGTTATACCCAGTGGAATGCGGCAGCAATCCTGGTACAGGGTGGCATACTGGGCACTGTTTTGTaGTGGGGGCTCCATTCAGAG +
Preference number: 4 (lower is better)
Translates to: KYCYTQWNAAAILVQGGILGTVL*WGLHSE
Trigger: CTCTGAATGGAGCCCCCATCACAAAACAGTGCCCAG...TATGCCACCCTGTACCAGGATTGCTGCCGCATTCCACTGGGTATAACAGTATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR TCA 90 bp CCTCCTGGGCACTGTTTTGTGATGGGGGCTCCATTCAGAGGACTATTTGACTCTAATAGCTCCTGGGGCTaGAGTGAGGGACTCTTTAAG +
Preference number: 4 (lower is better)
Translates to: PPGHCFVMGAPFRGLFDSNSSWG*SEGLFK
Trigger: CTTAAAGAGTCCCTCACTTCAGCCCCAGGAGCTATT...AGAGTCAAATAGTCCTCTGAATGGAGCCCCCATCACAAAACAGTGCCCAGGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR TCA 90 bp CCTGGGCACTGTTTTGTGATGGGGGCTCCATTCAGAGGACTATTTGACTCTTGTTCCCTGTGTTGTAAATaGGGACACCAGGGCTCAGAG +
Preference number: 4 (lower is better)
Translates to: PGHCFVMGAPFRGLFDSCSLCCK*GHQGSE
Trigger: CTCTGAGCCCTGGTGTCCTCATTTACAACACAGGGA...ACAAGAGTCAAATAGTCCTCTGAATGGAGCCCCCATCACAAAACAGTGCCCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514516.5
CDS-3UTR GCA 90 bp ACAAGACATCTCCAGTTTCTCAGAAAGAACTGGTACCGGGTAGGGCCACCGAAGAGGTACTGGTACTGCTaGTGCTGTTGGAGGAACACA +
Preference number: 4 (lower is better)
Translates to: TRHLQFLRKNWYRVGPPKRYWYC*CCWRNT
Trigger: TGTGTTCCTCCAACAGCAGCAGCAGTACCAGTACCT...CTTCGGTGGCCCTACCCGGTACCAGTTCTTTCTGAGAAACTGGAGATGTCTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp AAATACTGTTATACCCAGTGGAATGCGGCAGCAATCCTGGTACAGGGTGGCATACGCTCATTGTCTCTCTaGAGCCTGGCATTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: KYCYTQWNAAAILVQGGIRSLSL*SLAFSL
Trigger: GAGGGAGAATGCCAGGCTGCAGAGAGACAATGAGCG...TATGCCACCCTGTACCAGGATTGCTGCCGCATTCCACTGGGTATAACAGTATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp CCTCCTGGGCACTGTTTTGTGATGGGGGCTCCATTCAGAGGACTATTTGACTCTTGCCAGGCGGCGATTTaGAGATTCCAATCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: PPGHCFVMGAPFRGLFDSCQAAI*RFQSLS
Trigger: AGAGAGAGATTGGAATCTGCAAATCGCCGCCTGGCA...AGAGTCAAATAGTCCTCTGAATGGAGCCCCCATCACAAAACAGTGCCCAGGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp CTCCAGGTGGGAATGAAGACACTTATGCTAACAAGACATCTCCAGTTTCTCAGATTCTGGGGGTGCCGGTaGTCTCACAGCTCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: LQVGMKTLMLTRHLQFLRFWGCR*SHSSPL
Trigger: GAGAGGAGAGCTGTGAGAGCACCGGCACCCCCAGAA...TCTGAGAAACTGGAGATGTCTTGTTAGCATAAGTGTCTTCATTCCCACCTGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp GGAGACACATCGGAACCTGCAGGCCTCAGTCTTCTGTTCCACAAGAAAGGGAATAGACACATCGGAACCTaGAGGCCTCAGTCTTCTGTT +
Preference number: 4 (lower is better)
Translates to: GDTSEPAGLSLLFHKKGNRHIGT*RPQSSV
Trigger: AACAGAAGACTGAGGCCTGCAGGTTCCGATGTGTCT...ATTCCCTTTCTTGTGGAACAGAAGACTGAGGCCTGCAGGTTCCGATGTGTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp AAATACTGTTATACCCAGTGGAATGCGGCAGCAATCCTGGTACAGGGTGGCATACCATCTTGTTCCGCATaGTCTTCTCCAGGGCCTCAC +
Preference number: 4 (lower is better)
Translates to: KYCYTQWNAAAILVQGGIPSCSA*SSPGPH
Trigger: GTGAGGCCCTGGAGAAGACCATGCGGAACAAGATGG...TATGCCACCCTGTACCAGGATTGCTGCCGCATTCCACTGGGTATAACAGTATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp AAATACTGTTATACCCAGTGGAATGCGGCAGCAATCCTGGTACAGGGTGGCATATCTGAGCAAGCAGCTTaGCCACCATGTCCTGACTGC +
Preference number: 4 (lower is better)
Translates to: KYCYTQWNAAAILVQGGISEQAA*PPCPDC
Trigger: GCAGTCAGGACATGGTGGCCAAGCTGCTTGCTCAGA...TATGCCACCCTGTACCAGGATTGCTGCCGCATTCCACTGGGTATAACAGTATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp TTTGCTCCTCTCCCAAACCCTCCAGGTGGGAATGAAGACACTTATGCTAACAAGTCTGAGCAAGCAGCTTaGCCACCATGTCCTGACTGC +
Preference number: 4 (lower is better)
Translates to: FAPLPNPPGGNEDTYANKSEQAA*PPCPDC
Trigger: GCAGTCAGGACATGGTGGCCAAGCTGCTTGCTCAGA...CTTGTTAGCATAAGTGTCTTCATTCCCACCTGGAGGGTTTGGGAGAGGAGCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp CTCCAGGTGGGAATGAAGACACTTATGCTAACAAGACATCTCCAGTTTCTCAGATGCCAGGGTCTCTCCTaGAGCGCTGCTGAAGGACCT +
Preference number: 4 (lower is better)
Translates to: LQVGMKTLMLTRHLQFLRCQGLS*SAAEGP
Trigger: AGGTCCTTCAGCAGCGCTCCAGGAGAGACCCTGGCA...TCTGAGAAACTGGAGATGTCTTGTTAGCATAAGTGTCTTCATTCCCACCTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp CTGGCCTTCTGGATGGTTTCGGACAAAACTTTATGTGCTAGGTGGGAGTGGGAAAGGCAGCCGAGATCCTaGGAATCGAGCAGCTTTAAC +
Preference number: 4 (lower is better)
Translates to: LAFWMVSDKTLCARWEWERQPRS*ESSSFN
Trigger: GTTAAAGCTGCTCGATTCCCAGGATCTCGGCTGCCT...TTCCCACTCCCACCTAGCACATAAAGTTTTGTCCGAAACCATCCAGAAGGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249883.10
CDS-3UTR CCA 90 bp GAATCCTCATTCTCCATAAGGCCCGGAGGAATGTGGGCTAAGAAGCAGAGTCTTAGGCAGCCGAGATCCTaGGAATCGAGCAGCTTTAAC +
Preference number: 4 (lower is better)
Translates to: ESSFSIRPGGMWAKKQSLRQPRS*ESSSFN
Trigger: GTTAAAGCTGCTCGATTCCCAGGATCTCGGCTGCCT...AAGACTCTGCTTCTTAGCCCACATTCCTCCGGGCCTTATGGAGAATGAGGATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp CAGCCTCCTGGGCACTGTTTTGTGATGGGGGCTCCATTCAGAGGACTATTTGACGATGTCTGTTCACGGTaGCTCATTTCATCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: QPPGHCFVMGAPFRGLFDDVCSR*LISSGS
Trigger: TGAGCCAGATGAAATGAGCCACCGTGAACAGACATC...GTCAAATAGTCCTCTGAATGGAGCCCCCATCACAAAACAGTGCCCAGGAGGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp CAAAGCATCTGGTGCTGCTTTAGGGCGCTGGGCATGGGTAGCTTGAGGAGCCAGACACATCATGGTCTTTaGCAGAAAATGTTCACAGCA +
Preference number: 4 (lower is better)
Translates to: QSIWCCFRALGMGSLRSQTHHGL*QKMFTA
Trigger: TGCTGTGAACATTTTCTGCCAAAGACCATGATGTGT...CTGGCTCCTCAAGCTACCCATGCCCAGCGCCCTAAAGCAGCACCAGATGCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp ACAAGACATCTCCAGTTTCTCAGAAAGAACTGGTACCGGGTAGGGCCACCGAAGTGGTGCCTGGCCTTCTaGATGGTTTCGGACAAAACT +
Preference number: 4 (lower is better)
Translates to: TRHLQFLRKNWYRVGPPKWCLAF*MVSDKT
Trigger: AGTTTTGTCCGAAACCATCCAGAAGGCCAGGCACCA...CTTCGGTGGCCCTACCCGGTACCAGTTCTTTCTGAGAAACTGGAGATGTCTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249883.10
CDS-3UTR TCA 90 bp CTCCAGGTGGGAATGAAGACACTTATGCTAACAAGACATCTCCAGTTTCTCAGACTCCTGGAGCGCTGCTaGAGGACCTTGATCACTGCA +
Preference number: 4 (lower is better)
Translates to: LQVGMKTLMLTRHLQFLRLLERC*RTLITA
Trigger: TGCAGTGATCAAGGTCCTTCAGCAGCGCTCCAGGAG...TCTGAGAAACTGGAGATGTCTTGTTAGCATAAGTGTCTTCATTCCCACCTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp CCTGGGCACTGTTTTGTGATGGGGGCTCCATTCAGAGGACTATTTGACTCTTGTGGAGCACCTTTAACCTaGTTTCCATCTCCTGATGCC +
Preference number: 4 (lower is better)
Translates to: PGHCFVMGAPFRGLFDSCGAPLT*FPSPDA
Trigger: GGCATCAGGAGATGGAAAGCAGGTTAAAGGTGCTCC...ACAAGAGTCAAATAGTCCTCTGAATGGAGCCCCCATCACAAAACAGTGCCCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp CTCCAGGTGGGAATGAAGACACTTATGCTAACAAGACATCTCCAGTTTCTCAGACTCTCTGGCTACTGCTaGACCCCAGAAGGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: LQVGMKTLMLTRHLQFLRLSGYC*TPEGCQ
Trigger: CTGACAGCCTTCTGGGGTGCAGCAGTAGCCAGAGAG...TCTGAGAAACTGGAGATGTCTTGTTAGCATAAGTGTCTTCATTCCCACCTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp GGGGTCCCGTGGGCATTTATAGGGCTCAAGATAGAGGAAAAGGCAGCCGAGATCGAATTATATACAAACTaGGCACTGTCTCCCAGTCCA +
Preference number: 4 (lower is better)
Translates to: GVPWAFIGLKIEEKAAEIELYTN*ALSPSP
Trigger: TGGACTGGGAGACAGTGCGCAGTTTGTATATAATTC...GATCTCGGCTGCCTTTTCCTCTATCTTGAGCCCTATAAATGCCCACGGGACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp GGCATTTATAGGGCTCAAGATAGAGGAAAAGGCAGCCGAGATCCTGGGAATCGATTCTTGAATGTCCTCTaGATGGTGCCTGGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: GIYRAQDRGKGSRDPGNRFLNVL*MVPGLL
Trigger: CAGAAGGCCAGGCACCATGCAGAGGACATTCAAGAA...TCGATTCCCAGGATCTCGGCTGCCTTTTCCTCTATCTTGAGCCCTATAAATGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249883.10
CDS-3UTR CCA 90 bp CTCCAGGTGGGAATGAAGACACTTATGCTAACAAGACATCTCCAGTTTCTCAGAAGCTGTGGGAAGCTGTaGGAGGAGCTCATGTGGCTG +
Preference number: 4 (lower is better)
Translates to: LQVGMKTLMLTRHLQFLRSCGKL*EELMWL
Trigger: CAGCCACATGAGCTCCTCCCACAGCTTCCCACAGCT...TCTGAGAAACTGGAGATGTCTTGTTAGCATAAGTGTCTTCATTCCCACCTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp CCTCCTGGGCACTGTTTTGTGATGGGGGCTCCATTCAGAGGACTATTTGACTCTTGGCAAACTGCCTCATaGCACGTTCCTCCAAATACT +
Preference number: 4 (lower is better)
Translates to: PPGHCFVMGAPFRGLFDSWQTAS*HVPPNT
Trigger: AGTATTTGGAGGAACGTGCCATGAGGCAGTTTGCCA...AGAGTCAAATAGTCCTCTGAATGGAGCCCCCATCACAAAACAGTGCCCAGGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp CCTGGGCACTGTTTTGTGATGGGGGCTCCATTCAGAGGACTATTTGACTCTTGTTCCAGGATCTGGGCATaGAGCACCTTTAACCTGCTT +
Preference number: 4 (lower is better)
Translates to: PGHCFVMGAPFRGLFDSCSRIWA*STFNLL
Trigger: AAGCAGGTTAAAGGTGCTCCATGCCCAGATCCTGGA...ACAAGAGTCAAATAGTCCTCTGAATGGAGCCCCCATCACAAAACAGTGCCCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp CTCCAGGTGGGAATGAAGACACTTATGCTAACAAGACATCTCCAGTTTCTCAGAAGAGAGGCTGCTCTCTaGCTACTGCTGCACCCCAGA +
Preference number: 4 (lower is better)
Translates to: LQVGMKTLMLTRHLQFLRREAAL*LLLHPR
Trigger: TCTGGGGTGCAGCAGTAGCCAGAGAGCAGCCTCTCT...TCTGAGAAACTGGAGATGTCTTGTTAGCATAAGTGTCTTCATTCCCACCTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp CCTCCTGGGCACTGTTTTGTGATGGGGGCTCCATTCAGAGGACTATTTGACTCTGATGTCTGTTCACGGTaGCTCATTTCATCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: PPGHCFVMGAPFRGLFDSDVCSR*LISSGS
Trigger: TGAGCCAGATGAAATGAGCCACCGTGAACAGACATC...AGAGTCAAATAGTCCTCTGAATGGAGCCCCCATCACAAAACAGTGCCCAGGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp AGGCAGCCGAGATCCTGGGAATCGAGCAGCTTTAACATCCACGGGCCAGGAACTACACATCATGGTCTTTaGCAGAAAATGTTCACAGCA +
Preference number: 4 (lower is better)
Translates to: RQPRSWESSSFNIHGPGTTHHGL*QKMFTA
Trigger: TGCTGTGAACATTTTCTGCCAAAGACCATGATGTGT...AGTTCCTGGCCCGTGGATGTTAAAGCTGCTCGATTCCCAGGATCTCGGCTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp TTTAGGGCGCTGGGCATGGGTAGCTTGAGGAGCCAGCCTCCTGGGCACTGTTTTTACAGACACACATCATaGTCTTTGGCAGAAAATGTT +
Preference number: 4 (lower is better)
Translates to: FRALGMGSLRSQPPGHCFYRHTS*SLAENV
Trigger: AACATTTTCTGCCAAAGACCATGATGTGTGTCTGTA...AAAACAGTGCCCAGGAGGCTGGCTCCTCAAGCTACCCATGCCCAGCGCCCTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp ACAAGACATCTCCAGTTTCTCAGAAAGAACTGGTACCGGGTAGGGCCACCGAAGTACTGTTATACCCAGTaGAATGCGGCAGCAATCCTG +
Preference number: 4 (lower is better)
Translates to: TRHLQFLRKNWYRVGPPKYCYTQ*NAAAIL
Trigger: CAGGATTGCTGCCGCATTCCACTGGGTATAACAGTA...CTTCGGTGGCCCTACCCGGTACCAGTTCTTTCTGAGAAACTGGAGATGTCTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR TCA 90 bp AAATACTGTTATACCCAGTGGAATGCGGCAGCAATCCTGGTACAGGGTGGCATAATCAGGAAAGAGTGGTaGTGTCACAGCAAAGGAGGG +
Preference number: 4 (lower is better)
Translates to: KYCYTQWNAAAILVQGGIIRKEW*CHSKGG
Trigger: CCCTCCTTTGCTGTGACATCACCACTCTTTCCTGAT...TATGCCACCCTGTACCAGGATTGCTGCCGCATTCCACTGGGTATAACAGTATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249883.10
CDS-3UTR TCA 90 bp CCTGGGCACTGTTTTGTGATGGGGGCTCCATTCAGAGGACTATTTGACTCTTGTCAGAGTCACACACAGTaGGAACCAGGTAATCAACCA +
Preference number: 4 (lower is better)
Translates to: PGHCFVMGAPFRGLFDSCQSHTQ*EPGNQP
Trigger: TGGTTGATTACCTGGTTCTCACTGTGTGTGACTCTG...ACAAGAGTCAAATAGTCCTCTGAATGGAGCCCCCATCACAAAACAGTGCCCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514516.5
CDS-3UTR GCA 90 bp TTTGCTCCTCTCCCAAACCCTCCAGGTGGGAATGAAGACACTTATGCTAACAAGTCCCGGTTGAAGTCTTaGAGCCTCCTCATTTCACTG +
Preference number: 4 (lower is better)
Translates to: FAPLPNPPGGNEDTYANKSRLKS*SLLISL
Trigger: CAGTGAAATGAGGAGGCTGCAAGACTTCAACCGGGA...CTTGTTAGCATAAGTGTCTTCATTCCCACCTGGAGGGTTTGGGAGAGGAGCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp CAGCCTCCTGGGCACTGTTTTGTGATGGGGGCTCCATTCAGAGGACTATTTGACGAATTATATACAAACTaGGCACTGTCTCCCAGTCCA +
Preference number: 4 (lower is better)
Translates to: QPPGHCFVMGAPFRGLFDELYTN*ALSPSP
Trigger: TGGACTGGGAGACAGTGCGCAGTTTGTATATAATTC...GTCAAATAGTCCTCTGAATGGAGCCCCCATCACAAAACAGTGCCCAGGAGGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp CTCCAGGTGGGAATGAAGACACTTATGCTAACAAGACATCTCCAGTTTCTCAGACAAAGCATCTGGTGCTaGTTTAGGGCGCTGGGCATG +
Preference number: 4 (lower is better)
Translates to: LQVGMKTLMLTRHLQFLRQSIWC*FRALGM
Trigger: CATGCCCAGCGCCCTAAAGCAGCACCAGATGCTTTG...TCTGAGAAACTGGAGATGTCTTGTTAGCATAAGTGTCTTCATTCCCACCTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp GAATCCTCATTCTCCATAAGGCCCGGAGGAATGTGGGCTAAGAAGCAGAGTCTTTGGCAAACTGCCTCATaGCACGTTCCTCCAAATACT +
Preference number: 4 (lower is better)
Translates to: ESSFSIRPGGMWAKKQSLWQTAS*HVPPNT
Trigger: AGTATTTGGAGGAACGTGCCATGAGGCAGTTTGCCA...AAGACTCTGCTTCTTAGCCCACATTCCTCCGGGCCTTATGGAGAATGAGGATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp CTCCAGGTGGGAATGAAGACACTTATGCTAACAAGACATCTCCAGTTTCTCAGAATGGGAATGAGTGTCTaGCTGGGGAAAGGGACGGAG +
Preference number: 4 (lower is better)
Translates to: LQVGMKTLMLTRHLQFLRMGMSV*LGKGTE
Trigger: CTCCGTCCCTTTCCCCAGCCAGACACTCATTCCCAT...TCTGAGAAACTGGAGATGTCTTGTTAGCATAAGTGTCTTCATTCCCACCTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp CCTGGGCACTGTTTTGTGATGGGGGCTCCATTCAGAGGACTATTTGACTCTTGTGATGTCTGTTCACGGTaGCTCATTTCATCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: PGHCFVMGAPFRGLFDSCDVCSR*LISSGS
Trigger: TGAGCCAGATGAAATGAGCCACCGTGAACAGACATC...ACAAGAGTCAAATAGTCCTCTGAATGGAGCCCCCATCACAAAACAGTGCCCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp GGCATTTATAGGGCTCAAGATAGAGGAAAAGGCAGCCGAGATCCTGGGAATCGAACTTTATGTGCTAGGTaGGAGTGGGAAAAGGAGTGG +
Preference number: 4 (lower is better)
Translates to: GIYRAQDRGKGSRDPGNRTLCAR*EWEKEW
Trigger: CCACTCCTTTTCCCACTCCCACCTAGCACATAAAGT...TCGATTCCCAGGATCTCGGCTGCCTTTTCCTCTATCTTGAGCCCTATAAATGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249883.10
CDS-3UTR CCA 90 bp ATGAAAGGGGAAAAATGCCAGCCACATCCTCATTCCAACTCTATCCTTAATGCACCATCTTGTTCCGCATaGTCTTCTCCAGGGCCTCAC +
Preference number: 4 (lower is better)
Translates to: MKGEKCQPHPHSNSILNAPSCSA*SSPGPH
Trigger: GTGAGGCCCTGGAGAAGACCATGCGGAACAAGATGG...TGCATTAAGGATAGAGTTGGAATGAGGATGTGGCTGGCATTTTTCCCCTTTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249883.10
CDS-3UTR CCA 90 bp CTCCAGGTGGGAATGAAGACACTTATGCTAACAAGACATCTCCAGTTTCTCAGAAGGCCCGGAGGAATGTaGGCTAAGAAGCAGAGTCTT +
Preference number: 4 (lower is better)
Translates to: LQVGMKTLMLTRHLQFLRRPGGM*AKKQSL
Trigger: AAGACTCTGCTTCTTAGCCCACATTCCTCCGGGCCT...TCTGAGAAACTGGAGATGTCTTGTTAGCATAAGTGTCTTCATTCCCACCTGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp GAATCCTCATTCTCCATAAGGCCCGGAGGAATGTGGGCTAAGAAGCAGAGTCTTAATCCTGGTACAGGGTaGCATAACAAAACAGCCATG +
Preference number: 4 (lower is better)
Translates to: ESSFSIRPGGMWAKKQSLNPGTG*HNKTAM
Trigger: CATGGCTGTTTTGTTATGCCACCCTGTACCAGGATT...AAGACTCTGCTTCTTAGCCCACATTCCTCCGGGCCTTATGGAGAATGAGGATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CCA 90 bp GGCATTTATAGGGCTCAAGATAGAGGAAAAGGCAGCCGAGATCCTGGGAATCGAAATCCTGGTACAGGGTaGCATAACAAAACAGCCATG +
Preference number: 4 (lower is better)
Translates to: GIYRAQDRGKGSRDPGNRNPGTG*HNKTAM
Trigger: CATGGCTGTTTTGTTATGCCACCCTGTACCAGGATT...TCGATTCCCAGGATCTCGGCTGCCTTTTCCTCTATCTTGAGCCCTATAAATGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp GAATCCTCATTCTCCATAAGGCCCGGAGGAATGTGGGCTAAGAAGCAGAGTCTTGAATTATATACAAACTaGGCACTGTCTCCCAGTCCA +
Preference number: 4 (lower is better)
Translates to: ESSFSIRPGGMWAKKQSLELYTN*ALSPSP
Trigger: TGGACTGGGAGACAGTGCGCAGTTTGTATATAATTC...AAGACTCTGCTTCTTAGCCCACATTCCTCCGGGCCTTATGGAGAATGAGGATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR GCA 90 bp CTCCAGGTGGGAATGAAGACACTTATGCTAACAAGACATCTCCAGTTTCTCAGAATGAAAGGGGAAAAATaGCAGCCACATCCTCATTCC +
Preference number: 4 (lower is better)
Translates to: LQVGMKTLMLTRHLQFLRMKGEK*QPHPHS
Trigger: GGAATGAGGATGTGGCTGGCATTTTTCCCCTTTCAT...TCTGAGAAACTGGAGATGTCTTGTTAGCATAAGTGTCTTCATTCCCACCTGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249883.10
CDS-3UTR TCA 90 bp CTCCAGGTGGGAATGAAGACACTTATGCTAACAAGACATCTCCAGTTTCTCAGAAAGAAATGTTATCTATaGAAGGGGAAAAATGCCAGC +
Preference number: 4 (lower is better)
Translates to: LQVGMKTLMLTRHLQFLRKKCYL*KGKNAS
Trigger: GCTGGCATTTTTCCCCTTTCATAGATAACATTTCTT...TCTGAGAAACTGGAGATGTCTTGTTAGCATAAGTGTCTTCATTCCCACCTGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249883.10
CDS CCA 90 bp CCGCCCCACCACGAGCCCGGGCGGACCTGGAGCACCGGTGGCCGCTaGTACGCCTGGGGCGAGCCGGTGAGGGTAGCCCGAGGCCCGGAG +
Preference number: 5 (lower is better)
Translates to: PPHHEPGRTWSTGGR*YAWGEPVRVARGPE
Trigger: CTCCGGGCCTCGGGCTACCCTCACCGGCTCGCCCCAGGCGTACCAGCGGCCACCGGTGCTCCAGGTCCGCCCGGGCTCGTGGTGGGGCGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515172.1
CDS GCA 90 bp CCCCGCAAAGCCCAGCGCGCTGCGCTCCCTGGGCAGAGCGGCCCTTaGCAGGCACTGCGGCTGCCTCGAAAGGGCGCACTGCGCCCCGAG +
Preference number: 5 (lower is better)
Translates to: PRKAQRAALPGQSGP*QALRLPRKGALRPE
Trigger: CTCGGGGCGCAGTGCGCCCTTTCGAGGCAGCCGCAGTGCCTGGCAAGGGCCGCTCTGCCCAGGGAGCGCAGCGCGCTGGGCTTTGCGGGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502491.1
CDS CCA 90 bp GGCTCGGCCCAGCTCAGCTCGGCGGCGAAGATGTGTTCTCGGCCGTaGCGCCGACGCTCTGGCTGTTCGCGCCCCAGCGCGCAGCCCCAG +
Preference number: 5 (lower is better)
Translates to: GSAQLSSAAKMCSRP*RRRSGCSRPSAQPQ
Trigger: CTGGGGCTGCGCGCTGGGGCGCGAACAGCCAGAGCGTCGGCGCCACGGCCGAGAACACATCTTCGCCGCCGAGCTGAGCTGGGCCGAGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511759.1
ENST00000512955.1
CDS GCA 90 bp ATGGCCGGTGGCACCTGGCCCCAGAGCACCGCTGCGGCCCGAGGGTaGCCAGCGCAGTCAGACACCACAACCTCCGGCTCGGCCCAGCTC +
Preference number: 5 (lower is better)
Translates to: MAGGTWPQSTAAARG*PAQSDTTTSGSAQL
Trigger: GAGCTGGGCCGAGCCGGAGGTTGTGGTGTCTGACTGCGCTGGGCACCCTCGGGCCGCAGCGGTGCTCTGGGGCCAGGTGCCACCGGCCAT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000511759.1
ENST00000512955.1
ENST00000513145.1
CDS GCA 90 bp TCCTCTTCGGCTCGAGCTGCCCGGCCCTGCGCATTGCCCAGAGCCTaGTCCAGCAGCTCGGCACGCCGCCGCTGGTCCTCGATGGCGCCG +
Preference number: 5 (lower is better)
Translates to: SSSARAARPCALPRA*SSSSARRRWSSMAP
Trigger: CGGCGCCATCGAGGACCAGCGGCGGCGTGCCGAGCTGCTGGAGCAGGCTCTGGGCAATGCGCAGGGCCGGGCAGCTCGAGCCGAAGAGGA
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000506326.1
ENST00000513145.1
ENST00000514516.5
CDS GCA 90 bp GCGCTGCGCTCCCTGGGCAGAGCGGCCCTTGCCAGGCACTGCGGCTaGCTCGAAAGGGCGCACTGCGCCCCGAGGACGCTCGATCCTCGA +
Preference number: 5 (lower is better)
Translates to: ALRSLGRAALARHCG*LERAHCAPRTLDPR
Trigger: TCGAGGATCGAGCGTCCTCGGGGCGCAGTGCGCCCTTTCGAGGCAGCCGCAGTGCCTGGCAAGGGCCGCTCTGCCCAGGGAGCGCAGCGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502491.1
CDS CCA 90 bp CACGAGCCCGGGCGGACCTGGAGCACCGGTGGCCGCTGGTACGCCTaGGGCGAGCCGGTGAGGGTAGCCCGAGGCCCGGAGAGGTCTTTA +
Preference number: 5 (lower is better)
Translates to: HEPGRTWSTGGRWYA*GEPVRVARGPERSL
Trigger: TAAAGACCTCTCCGGGCCTCGGGCTACCCTCACCGGCTCGCCCCAGGCGTACCAGCGGCCACCGGTGCTCCAGGTCCGCCCGGGCTCGTG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515172.1
CDS GCA 90 bp CCAAGAGACCCGCGCGTTTCTAGAGCCCCGCAAAGCCCAGCGCGCTaGGCTCCCTGGGCAGAGCGGCCCTTGCCAGGCACTGCGGCTGCC +
Preference number: 5 (lower is better)
Translates to: PRDPRVSRAPQSPAR*APWAERPLPGTAAA
Trigger: GGCAGCCGCAGTGCCTGGCAAGGGCCGCTCTGCCCAGGGAGCGCAGCGCGCTGGGCTTTGCGGGGCTCTAGAAACGCGCGGGTCTCTTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502491.1
CDS CCA 90 bp CCGCGCGTTTCTAGAGCCCCGCAAAGCCCAGCGCGCTGCGCTCCCTaGGCAGAGCGGCCCTTGCCAGGCACTGCGGCTGCCTCGAAAGGG +
Preference number: 5 (lower is better)
Translates to: PRVSRAPQSPARCAP*AERPLPGTAAASKG
Trigger: CCCTTTCGAGGCAGCCGCAGTGCCTGGCAAGGGCCGCTCTGCCCAGGGAGCGCAGCGCGCTGGGCTTTGCGGGGCTCTAGAAACGCGCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502491.1
CDS CCA 90 bp ACAGCTGCCTGGACAATGGCCGGTGGCACCTGGCCCCAGAGCACCTaGAGCACCGGTGGCCGCTGGTACGCCTGGGGCGAGCCGGTGAGG +
Preference number: 5 (lower is better)
Translates to: TAAWTMAGGTWPQST*STGGRWYAWGEPVR
Trigger: CCTCACCGGCTCGCCCCAGGCGTACCAGCGGCCACCGGTGCTCCAGGTGCTCTGGGGCCAGGTGCCACCGGCCATTGTCCAGGCAGCTGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504234.1
CDS CCA 90 bp CCTGGGCTCCTGCTCGCCTGGAGCACCGGTGGCCGCTGGTACGCCTaGGGCGAGCCGGTGAGGGTAGCCCGAGGCCCGGAGAGGTCTTTA +
Preference number: 5 (lower is better)
Translates to: PGLLLAWSTGGRWYA*GEPVRVARGPERSL
Trigger: TAAAGACCTCTCCGGGCCTCGGGCTACCCTCACCGGCTCGCCCCAGGCGTACCAGCGGCCACCGGTGCTCCAGGCGAGCAGGAGCCCAGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510560.1
CDS GCA 90 bp AGCTGCCTGGACAATGGCCGGTGGCACCTGGCCCCAGAGCACCGCTaGGGCCCGAGGGTGCCCAGCGCAGTCAGACACCACAACCTCCGG +
Preference number: 5 (lower is better)
Translates to: SCLDNGRWHLAPEHR*GPRVPSAVRHHNLR
Trigger: CCGGAGGTTGTGGTGTCTGACTGCGCTGGGCACCCTCGGGCCGCAGCGGTGCTCTGGGGCCAGGTGCCACCGGCCATTGTCCAGGCAGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000511759.1
ENST00000512955.1
ENST00000513145.1
CDS CCA 90 bp TGCGCATTGCCCAGAGCCTGCTCCAGCAGCTCGGCACGCCGCCGCTaGTCCTCGATGGCGCCGCGCAGCAGTGCCATCTCTCGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: CALPRACSSSSARRR*SSMAPRSSAISRSS
Trigger: GCTGGAGCGAGAGATGGCACTGCTGCGCGGCGCCATCGAGGACCAGCGGCGGCGTGCCGAGCTGCTGGAGCAGGCTCTGGGCAATGCGCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000506326.1
ENST00000513145.1
ENST00000514516.5
CDS CCA 90 bp ACCTGGCCCCAGAGCACCTGGAGCACCGGTGGCCGCTGGTACGCCTaGGGCGAGCCGGTGAGGGTAGCCCGAGGCCCGGAGAGGTCTTTA +
Preference number: 5 (lower is better)
Translates to: TWPQSTWSTGGRWYA*GEPVRVARGPERSL
Trigger: TAAAGACCTCTCCGGGCCTCGGGCTACCCTCACCGGCTCGCCCCAGGCGTACCAGCGGCCACCGGTGCTCCAGGTGCTCTGGGGCCAGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504234.1
CDS GCA 90 bp AGAGCGGCCCTTGCCAGGCACTGCGGCTGCCTCGAAAGGGCGCACTaGGCCCCGAGGACGCTCGATCCTCGAGGCTCCGACTCCCGGAAA +
Preference number: 5 (lower is better)
Translates to: RAALARHCGCLERAH*APRTLDPRGSDSRK
Trigger: TTTCCGGGAGTCGGAGCCTCGAGGATCGAGCGTCCTCGGGGCGCAGTGCGCCCTTTCGAGGCAGCCGCAGTGCCTGGCAAGGGCCGCTCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502491.1
CDS GCA 90 bp TGGCATTCTCCCTCAGCACGGCCTCCATCTGGGCCAGGTGGGCACTaGCCGAGGTGGCTGAGGAGGCCTGGGCACTCACTGGCCCCTCCA +
Preference number: 5 (lower is better)
Translates to: WHSPSARPPSGPGGH*PRWLRRPGHSLAPP
Trigger: TGGAGGGGCCAGTGAGTGCCCAGGCCTCCTCAGCCACCTCGGGCAGTGCCCACCTGGCCCAGATGGAGGCCGTGCTGAGGGAGAATGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS GCA 90 bp CCAGCGCGCAGCCCCAGGGTCGGCCCGCGCCGGAGGCGGCTGCTATaGCAGGAATGTGAGAGTTTCAGGTTCCCCCTCGGGATCAAAGCG +
Preference number: 5 (lower is better)
Translates to: PARSPRVGPRRRRLL*QECESFRFPLGIKA
Trigger: CGCTTTGATCCCGAGGGGGAACCTGAAACTCTCACATTCCTGGCATAGCAGCCGCCTCCGGCGCGGGCCGACCCTGGGGCTGCGCGCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000511759.1
ENST00000512955.1
CDS CCA 90 bp GGTTGCGGGCCAGCTGTGGGAAGCTGTGGGAGGAGCTCATGTGGCTaGGGGCCCGGGCGCCGTTCCTCTCCAGGGACAACTGAAGGAGCC +
Preference number: 5 (lower is better)
Translates to: GCGPAVGSCGRSSCG*GPGRRSSPGTTEGA
Trigger: GGCTCCTTCAGTTGTCCCTGGAGAGGAACGGCGCCCGGGCCCCCAGCCACATGAGCTCCTCCCACAGCTTCCCACAGCTGGCCCGCAACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000510560.1
ENST00000513145.1
ENST00000514516.5
CDS CCA 90 bp TGCAGCCTGGCATTCTCCCTCAGCACGGCCTCCATCTGGGCCAGGTaGGCACTGCCCGAGGTGGCTGAGGAGGCCTGGGCACTCACTGGC +
Preference number: 5 (lower is better)
Translates to: CSLAFSLSTASIWAR*ALPEVAEEAWALTG
Trigger: GCCAGTGAGTGCCCAGGCCTCCTCAGCCACCTCGGGCAGTGCCCACCTGGCCCAGATGGAGGCCGTGCTGAGGGAGAATGCCAGGCTGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS CCA 90 bp CCCTTGCCAGCCCTGGGTTCCTGCTGCCGCAGCCGCGAAAACAGATaGCACCGACTTGGCAGGCCGCAGGGAGCCCTGGATGGCCTTGCC +
Preference number: 5 (lower is better)
Translates to: PLPALGSCCRSRENR*HRLGRPQGALDGLA
Trigger: GGCAAGGCCATCCAGGGCTCCCTGCGGCCTGCCAAGTCGGTGCCATCTGTTTTCGCGGCTGCGGCAGCAGGAACCCAGGGCTGGCAAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000506326.1
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CAA 90 bp CAGAAAGAACTGGTACCGGGTAGGGCCACCGAAGCCCACCTGGGGGCATGGCAGGCCCGGCCCTGCGCATaGCCCAGAGCCTGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: QKELVPGRATEAHLGAWQARPCA*PRACSS
Trigger: GCTGGAGCAGGCTCTGGGCAATGCGCAGGGCCGGGC...CTGCCATGCCCCCAGGTGGGCTTCGGTGGCCCTACCCGGTACCAGTTCTTTCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CAA 90 bp GGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCGCCCGGCCCTGCGCATaGCCCAGAGCCTGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: GERDGAAVDGAAEMAESGARPCA*PRACSS
Trigger: GCTGGAGCAGGCTCTGGGCAATGCGCAGGGCCGGGC...GCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS CCA 90 bp CCTGGGTTCCTGCTGCCGCAGCCGCGAAAACAGATGGCACCGACTTaGCAGGCCGCAGGGAGCCCTGGATGGCCTTGCCAGGGTCTCTCC +
Preference number: 5 (lower is better)
Translates to: PGFLLPQPRKQMAPT*QAAGSPGWPCQGLS
Trigger: GGAGAGACCCTGGCAAGGCCATCCAGGGCTCCCTGCGGCCTGCCAAGTCGGTGCCATCTGTTTTCGCGGCTGCGGCAGCAGGAACCCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000506326.1
ENST00000513145.1
ENST00000514516.5
CDS CCA 90 bp GCCGGGTCCCTGCCTGCTGGGCCGCATAGTACTGCGAGTGGGCTTTaGCCTCCTCATAGGTGGGCAGCTCCTCTCCCTTGCTGGGCTGTG +
Preference number: 5 (lower is better)
Translates to: AGSLPAGPHSTASGL*PPHRWAAPLPCWAV
Trigger: CACAGCCCAGCAAGGGAGAGGAGCTGCCCACCTATGAGGAGGCCAAAGCCCACTCGCAGTACTATGCGGCCCAGCAGGCAGGGACCCGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000504234.1
ENST00000505596.1
ENST00000506107.1
ENST00000510560.1
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CAA 90 bp GACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGACAGATGGCACCGACTaGGCAGGCCGCAGGGAGCCC +
Preference number: 5 (lower is better)
Translates to: DGAAVDGAAEMAESGTGQTDGTD*AGRREP
Trigger: GGGCTCCCTGCGGCCTGCCAAGTCGGTGCCATCTGT...CTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS CCA 90 bp CAGTGTCCTCATGCTTCTTTGGCTTGCACACAGCTGCCTGGACAATaGCCGGTGGCACCTGGCCCCAGAGCACCGCTGCGGCCCGAGGGT +
Preference number: 5 (lower is better)
Translates to: QCPHASLACTQLPGQ*PVAPGPRAPLRPEG
Trigger: ACCCTCGGGCCGCAGCGGTGCTCTGGGGCCAGGTGCCACCGGCCATTGTCCAGGCAGCTGTGTGCAAGCCAAAGAAGCATGAGGACACTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000511759.1
ENST00000512955.1
ENST00000513145.1
CDS-3UTR CAA 90 bp CTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGGGGACGGAGCAGCGGTaGACGGGGCTGCTGAAATGG +
Preference number: 5 (lower is better)
Translates to: LAGERDGAAVDGAAEMAEGTEQR*TGLLKW
Trigger: CCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCC...CTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CAA 90 bp GACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGGGGACGGAGCAGCGGTaGACGGGGCTGCTGAAATGG +
Preference number: 5 (lower is better)
Translates to: DGAAVDGAAEMAESGTGQGTEQR*TGLLKW
Trigger: CCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCC...CTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS CCA 90 bp TTCTTTGGCTTGCACACAGCTGCCTGGACAATGGCCGGTGGCACCTaGCCCCAGAGCACCCAACTGAATCACCCGCCGCCAGGCGCTCTG +
Preference number: 5 (lower is better)
Translates to: FFGLHTAAWTMAGGT*PQSTQLNHPPPGAL
Trigger: CAGAGCGCCTGGCGGCGGGTGATTCAGTTGGGTGCTCTGGGGCCAGGTGCCACCGGCCATTGTCCAGGCAGCTGTGTGCAAGCCAAAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514516.5
CDS-3UTR CAA 90 bp AGTGTCTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGGGCAGCTCCTCTCCCTaGCTGGGCTGTGGGCATAGC +
Preference number: 5 (lower is better)
Translates to: SVWLGKGTEQRLTGLLKWGSSSP*LGCGHS
Trigger: GCTATGCCCACAGCCCAGCAAGGGAGAGGAGCTGCC...CCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAGACACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CAA 90 bp GAGTGTCTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGTCCAGGGCCTCACGCTaGGAGGAGGCTCTGGTCAGG +
Preference number: 5 (lower is better)
Translates to: ECLAGERDGAAVDGAAEMSRASR*EEALVR
Trigger: CCTGACCAGAGCCTCCTCCAAGCGTGAGGCCCTGGA...CATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAGACACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CAA 90 bp GCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGAGGAGGTGTGCACGCAGGGCCTaGAGTTCCTGCTCCAGGCGA +
Preference number: 5 (lower is better)
Translates to: AAVDGAAEMAESGTGQRRCARRA*SSCSRR
Trigger: TCGCCTGGAGCAGGAACTCAAGGCCCTGCGTGCACA...CCTCCTCTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CAA 90 bp AGTGTCTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGGGCATGGGTAGCTaGAGGAGCCAGCCTCCTGGG +
Preference number: 5 (lower is better)
Translates to: SVWLGKGTEQRLTGLLKWLGMGS*RSQPPG
Trigger: CCCAGGAGGCTGGCTCCTCAAGCTACCCATGCCCAG...CCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAGACACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CAA 90 bp GAGTGTCTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGCTGGGCATGGGTAGCTaGAGGAGCCAGCCTCCTGGG +
Preference number: 5 (lower is better)
Translates to: ECLAGERDGAAVDGAAEMLGMGS*RSQPPG
Trigger: CCCAGGAGGCTGGCTCCTCAAGCTACCCATGCCCAG...CATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAGACACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS CCA 90 bp AGTCTTCCAGTGTCCTCATGCTTCTTTGGCTTGCACACAGCTGCCTaGACAATGGCCGGTGGCACCTGGCCCCAGAGCACCGCTGCGGCC +
Preference number: 5 (lower is better)
Translates to: SLPVSSCFFGLHTAA*TMAGGTWPQSTAAA
Trigger: GGCCGCAGCGGTGCTCTGGGGCCAGGTGCCACCGGCCATTGTCCAGGCAGCTGTGTGCAAGCCAAAGAAGCATGAGGACACTGGAAGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000511759.1
ENST00000512955.1
ENST00000513145.1
CDS CCA 90 bp AAACCCATCGACGGGACGACAGCAAGGGCTGTACCACGCGTGTCCTaGGGTTGCTGCGGGAGGGGACTCCGGCTGTGTGTGTGTGTGTGT +
Preference number: 5 (lower is better)
Translates to: KPIDGTTARAVPRVS*GCCGRGLRLCVCVC
Trigger: ACACACACACACACACAGCCGGAGTCCCCTCCCGCAGCAACCCCAGGACACGCGTGGTACAGCCCTTGCTGTCGTCCCGTCGATGGGTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506107.1
CDS-3UTR CAA 90 bp AAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGCTCCTCTCCCTaGCTGGGCTGTGGGCATAGC +
Preference number: 5 (lower is better)
Translates to: KGTEQRLTGLLKWLRVAQGSSSP*LGCGHS
Trigger: GCTATGCCCACAGCCCAGCAAGGGAGAGGAGCTGCC...CTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CAA 90 bp GAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGCAGCTCCTCTCCCTaGCTGGGCTGTGGGCATAGC +
Preference number: 5 (lower is better)
Translates to: ERDGAAVDGAAEMAESGTGSSSP*LGCGHS
Trigger: GCTATGCCCACAGCCCAGCAAGGGAGAGGAGCTGCC...TGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CAA 90 bp GAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACATCCAGGGCCTCACGCTaGGAGGAGGCTCTGGTCAGG +
Preference number: 5 (lower is better)
Translates to: ERDGAAVDGAAEMAESGTSRASR*EEALVR
Trigger: CCTGACCAGAGCCTCCTCCAAGCGTGAGGCCCTGGA...TGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CAA 90 bp CTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGTGGGCCTCCTGTGTCTaGCTTGCCAGGCGGCGATTT +
Preference number: 5 (lower is better)
Translates to: LAGERDGAAVDGAAEMAEWASCV*LARRRF
Trigger: AAATCGCCGCCTGGCAAGCAAGACACAGGAGGCCCA...CTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CAA 90 bp GAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGAGGATGTGCACGCAGGGCCTaGAGTTCCTGCTCCAGGCGA +
Preference number: 5 (lower is better)
Translates to: EQRLTGLLKWLRVAQGRGCARRA*SSCSRR
Trigger: TCGCCTGGAGCAGGAACTCAAGGCCCTGCGTGCACA...TCCTCTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CAA 90 bp TGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGATGTGCACGCAGGGCCTaGAGTTCCTGCTCCAGGCGA +
Preference number: 5 (lower is better)
Translates to: WLGKGTEQRLTGLLKWLRCARRA*SSCSRR
Trigger: TCGCCTGGAGCAGGAACTCAAGGCCCTGCGTGCACA...TCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CAA 90 bp GCAGAGGGAGCTCAGCTCCTTTCTGAGCTGTCAGTTGCTACCCCAGTAGCAGGCACAGATGGCACCGACTaGGCAGGCCGCAGGGAGCCC +
Preference number: 5 (lower is better)
Translates to: AEGAQLLSELSVATPVAGTDGTD*AGRREP
Trigger: GGGCTCCCTGCGGCCTGCCAAGTCGGTGCCATCTGT...GCCTGCTACTGGGGTAGCAACTGACAGCTCAGAAAGGAGCTGAGCTCCCTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CAA 90 bp TGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGATCTCTGCTCCCGTGTTaGGCATGGGCAGCAGGGGGA +
Preference number: 5 (lower is better)
Translates to: WLGKGTEQRLTGLLKWLRSLLPC*AWAAGG
Trigger: TCCCCCTGCTGCCCATGCCAAACACGGGAGCAGAGA...TCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CAA 90 bp GAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGAGGATCTCTGCTCCCGTGTTaGGCATGGGCAGCAGGGGGA +
Preference number: 5 (lower is better)
Translates to: EQRLTGLLKWLRVAQGRGSLLPC*AWAAGG
Trigger: TCCCCCTGCTGCCCATGCCAAACACGGGAGCAGAGA...TCCTCTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CAA 90 bp CAGAAAGAACTGGTACCGGGTAGGGCCACCGAAGCCCACCTGGGGGCATGGCAGCCACGGGCCAGGAACTaGAGGAGGAGGCATAACTGG +
Preference number: 5 (lower is better)
Translates to: QKELVPGRATEAHLGAWQPRARN*RRRHNW
Trigger: CCAGTTATGCCTCCTCCTCAAGTTCCTGGCCCGTGG...CTGCCATGCCCCCAGGTGGGCTTCGGTGGCCCTACCCGGTACCAGTTCTTTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS TCA 90 bp TCTGCTCCTCCTTCTCTCGCAGTTGTTCTGACAGTCGCAGGGCGCTaGGCTCTGGAGACCCACCACTGCCACTGCTACCACCTGGGGCAC +
Preference number: 5 (lower is better)
Translates to: SAPPSLAVVLTVAGR*ALETHHCHCYHLGH
Trigger: GTGCCCCAGGTGGTAGCAGTGGCAGTGGTGGGTCTCCAGAGCTCAGCGCCCTGCGACTGTCAGAACAACTGCGAGAGAAGGAGGAGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000506326.1
ENST00000513145.1
ENST00000514516.5
CDS GCA 90 bp GAGGAGTCTTCCAGTGTCCTCATGCTTCTTTGGCTTGCACACAGCTaGCTGGACAATGGCCGGTGGCACCTGGCCCCAGAGCACCGCTGC +
Preference number: 5 (lower is better)
Translates to: EESSSVLMLLWLAHS*LDNGRWHLAPEHRC
Trigger: GCAGCGGTGCTCTGGGGCCAGGTGCCACCGGCCATTGTCCAGGCAGCTGTGTGCAAGCCAAAGAAGCATGAGGACACTGGAAGACTCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000511759.1
ENST00000512955.1
ENST00000513145.1
CDS GCA 90 bp TGTTTGTCGCTCACTAGAAGAGAGCCCTTGCCAGCCCTGGGTTCCTaGTGCCGCAGCCGCGAAAACAGATGGCACCGACTTGGCAGGCCG +
Preference number: 5 (lower is better)
Translates to: CLSLTRREPLPALGS*CRSRENRWHRLGRP
Trigger: CGGCCTGCCAAGTCGGTGCCATCTGTTTTCGCGGCTGCGGCAGCAGGAACCCAGGGCTGGCAAGGGCTCTCTTCTAGTGAGCGACAAACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000506326.1
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CAA 90 bp TTTAGGGCGCTGGGCATGGGTAGCTTGAGGAGCCAGCCTCCTGGGCACTGTTTTTCCAGGGCCTCACGCTaGGAGGAGGCTCTGGTCAGG +
Preference number: 5 (lower is better)
Translates to: FRALGMGSLRSQPPGHCFSRASR*EEALVR
Trigger: CCTGACCAGAGCCTCCTCCAAGCGTGAGGCCCTGGA...AAAACAGTGCCCAGGAGGCTGGCTCCTCAAGCTACCCATGCCCAGCGCCCTAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CAA 90 bp TGTCTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTCCTCCTGTGTCTTGCTaGCCAGGCGGCGATTTGCAG +
Preference number: 5 (lower is better)
Translates to: CLAGERDGAAVDGAAEMAPPVSC*PGGDLQ
Trigger: CTGCAAATCGCCGCCTGGCAAGCAAGACACAGGAGG...AGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CAA 90 bp TGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGATGGGCCTCCTGTGTCTaGCTTGCCAGGCGGCGATTT +
Preference number: 5 (lower is better)
Translates to: WLGKGTEQRLTGLLKWLRWASCV*LARRRF
Trigger: AAATCGCCGCCTGGCAAGCAAGACACAGGAGGCCCA...TCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CAA 90 bp AGTGTCTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGTGGGCCTCCTGTGTCTaGCTTGCCAGGCGGCGATTT +
Preference number: 5 (lower is better)
Translates to: SVWLGKGTEQRLTGLLKWWASCV*LARRRF
Trigger: AAATCGCCGCCTGGCAAGCAAGACACAGGAGGCCCA...CCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAGACACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS GCA 90 bp TTCTCAATGCGGCCAGCCTTCTCCGCAGAGCTCTCCAGCTCCCTCTaGAGCCGCTCATTGTCTCTCTGCAGCCTGGCATTCTCCCTCAGC +
Preference number: 5 (lower is better)
Translates to: FSMRPAFSAELSSSL*SRSLSLCSLAFSLS
Trigger: GCTGAGGGAGAATGCCAGGCTGCAGAGAGACAATGAGCGGCTGCAGAGGGAGCTGGAGAGCTCTGCGGAGAAGGCTGGCCGCATTGAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS GCA 90 bp CTCTGTGGGTGCTCTGTCTGCTGTAGTCAGCCGAGCAGGGGCGTCTaGTGTTTGTCGCTCACTAGAAGAGAGCCCTTGCCAGCCCTGGGT +
Preference number: 5 (lower is better)
Translates to: LCGCSVCCSQPSRGV*CLSLTRREPLPALG
Trigger: ACCCAGGGCTGGCAAGGGCTCTCTTCTAGTGAGCGACAAACAGCAGACGCCCCTGCTCGGCTGACTACAGCAGACAGAGCACCCACAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249883.10
ENST00000506326.1
CDS GCA 90 bp CTCCTCTGTGGGTGCTCTGTCTGTAGTCAGCCGAGCAGGGGCGTCTaGTGTTTGTCGCTCACTAGAAGAGAGCCCTTGCCAGCCCTGGGT +
Preference number: 5 (lower is better)
Translates to: LLCGCSVCSQPSRGV*CLSLTRREPLPALG
Trigger: ACCCAGGGCTGGCAAGGGCTCTCTTCTAGTGAGCGACAAACAGCAGACGCCCCTGCTCGGCTGACTACAGACAGAGCACCCACAGAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS GCA 90 bp GAGGAGTCTTCCAGTGTCCTCATGCTTCTTTGGCTTGCACACAGCTaGCTGGACAATGGCCGGTGGCACCTGGCCCCAGAGCACCTGGAG +
Preference number: 5 (lower is better)
Translates to: EESSSVLMLLWLAHS*LDNGRWHLAPEHLE
Trigger: CTCCAGGTGCTCTGGGGCCAGGTGCCACCGGCCATTGTCCAGGCAGCTGTGTGCAAGCCAAAGAAGCATGAGGACACTGGAAGACTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504234.1
CDS CCA 90 bp CACTGTCCATCTTGTTCCGCATGGTCTTCTCCAGGGCCTCACGCTTaGAGGAGGCTCTGGTCAGGCTCTCATGGGCCTCAGAGAGCCGCT +
Preference number: 5 (lower is better)
Translates to: HCPSCSAWSSPGPHA*RRLWSGSHGPQRAA
Trigger: AGCGGCTCTCTGAGGCCCATGAGAGCCTGACCAGAGCCTCCTCCAAGCGTGAGGCCCTGGAGAAGACCATGCGGAACAAGATGGACAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000506326.1
ENST00000513145.1
ENST00000514516.5
CDS CCA 90 bp GCGTCTGCTGTTTGTCGCTCACTAGAAGAGAGCCCTTGCCAGCCCTaGGTTCCTGCTGCCGCAGCCGCGAAAACAGATGGCACCGACTTG +
Preference number: 5 (lower is better)
Translates to: ASAVCRSLEESPCQP*VPAAAAAKTDGTDL
Trigger: CAAGTCGGTGCCATCTGTTTTCGCGGCTGCGGCAGCAGGAACCCAGGGCTGGCAAGGGCTCTCTTCTAGTGAGCGACAAACAGCAGACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000506326.1
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CAA 90 bp AGGCAGCCGAGATCCTGGGAATCGAGCAGCTTTAACATCCACGGGCCAGGAACTGGCAGCTCCTCTCCCTaGCTGGGCTGTGGGCATAGC +
Preference number: 5 (lower is better)
Translates to: RQPRSWESSSFNIHGPGTGSSSP*LGCGHS
Trigger: GCTATGCCCACAGCCCAGCAAGGGAGAGGAGCTGCC...AGTTCCTGGCCCGTGGATGTTAAAGCTGCTCGATTCCCAGGATCTCGGCTGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CAA 90 bp GAGTGTCTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGTACTGCTGCTGCTGTaGGAGGAACACAGGAGGCAC +
Preference number: 5 (lower is better)
Translates to: ECLAGERDGAAVDGAAEMVLLLL*EEHRRH
Trigger: GTGCCTCCTGTGTTCCTCCAACAGCAGCAGCAGTAC...CATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAGACACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CAA 90 bp AAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGTGGGCCTCCTGTGTCTaGCTTGCCAGGCGGCGATTT +
Preference number: 5 (lower is better)
Translates to: KGTEQRLTGLLKWLRVAQWASCV*LARRRF
Trigger: AAATCGCCGCCTGGCAAGCAAGACACAGGAGGCCCA...CTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CAA 90 bp ACAAGACATCTCCAGTTTCTCAGAAAGAACTGGTACCGGGTAGGGCCACCGAAGGCCCGGCCCTGCGCATaGCCCAGAGCCTGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: TRHLQFLRKNWYRVGPPKARPCA*PRACSS
Trigger: GCTGGAGCAGGCTCTGGGCAATGCGCAGGGCCGGGC...CTTCGGTGGCCCTACCCGGTACCAGTTCTTTCTGAGAAACTGGAGATGTCTTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CAA 90 bp GACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGAGGGGCGTCTGCTGTTaGTCGCTCACTAGAAGAGAG +
Preference number: 5 (lower is better)
Translates to: DGAAVDGAAEMAESGTGQRGVCC*SLTRRE
Trigger: CTCTCTTCTAGTGAGCGACAAACAGCAGACGCCCCT...CTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CAA 90 bp AAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGCCACGGGCCAGGAACTaGAGGAGGAGGCATAACTGG +
Preference number: 5 (lower is better)
Translates to: KGTEQRLTGLLKWLRVAQPRARN*RRRHNW
Trigger: CCAGTTATGCCTCCTCCTCAAGTTCCTGGCCCGTGG...CTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS TCA 90 bp CATGCTGGAAGTGCGGGCTGCCGCGGGCACGGTACCGTGGGTCAGTaGCAGCAGTGGTGGTCTCATGAGCTAGTACAACATGAGGGTACT +
Preference number: 5 (lower is better)
Translates to: HAGSAGCRGHGTVGQ*QQWWSHELVQHEGT
Trigger: AGTACCCTCATGTTGTACTAGCTCATGAGACCACCACTGCTGTCACTGACCCACGGTACCGTGCCCGCGGCAGCCCGCACTTCCAGCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS GCA 90 bp GAGGAGTCTTCCAGTGTCCTCATGCTTCTTTGGCTTGCACACAGCTaGCTGGACAATGGCCGGTGGCACCTGGCCCCAGAGCACCAGGAA +
Preference number: 5 (lower is better)
Translates to: EESSSVLMLLWLAHS*LDNGRWHLAPEHQE
Trigger: TTCCTGGTGCTCTGGGGCCAGGTGCCACCGGCCATTGTCCAGGCAGCTGTGTGCAAGCCAAAGAAGCATGAGGACACTGGAAGACTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505596.1
CDS GCA 90 bp GAGGAGTCTTCCAGTGTCCTCATGCTTCTTTGGCTTGCACACAGCTaGCTGGACAATGGCCGGTGGCACCTGGCCCCAGAGCACCCTTCA +
Preference number: 5 (lower is better)
Translates to: EESSSVLMLLWLAHS*LDNGRWHLAPEHPS
Trigger: TGAAGGGTGCTCTGGGGCCAGGTGCCACCGGCCATTGTCCAGGCAGCTGTGTGCAAGCCAAAGAAGCATGAGGACACTGGAAGACTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506107.1
CDS GCA 90 bp GAGGAGTCTTCCAGTGTCCTCATGCTTCTTTGGCTTGCACACAGCTaGCTGGACAATGGCCGGTGGCACCTGGCCCCAGAGCACCCAACT +
Preference number: 5 (lower is better)
Translates to: EESSSVLMLLWLAHS*LDNGRWHLAPEHPT
Trigger: AGTTGGGTGCTCTGGGGCCAGGTGCCACCGGCCATTGTCCAGGCAGCTGTGTGCAAGCCAAAGAAGCATGAGGACACTGGAAGACTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514516.5
CDS GCA 90 bp CGCCTTTCTAAGCCAGCGCGCGTCTCCAGCCTTGGCCTGGGCTCCTaGTCGCCTAAGGAACCAAAGACAGTCTCCAAGCTAGGAGGTTCT +
Preference number: 5 (lower is better)
Translates to: RLSKPARVSSLGLGS*SPKEPKTVSKLGGS
Trigger: AGAACCTCCTAGCTTGGAGACTGTCTTTGGTTCCTTAGGCGAGCAGGAGCCCAGGCCAAGGCTGGAGACGCGCGCTGGCTTAGAAAGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515172.1
CDS CCA 90 bp AGTCTTCCAGTGTCCTCATGCTTCTTTGGCTTGCACACAGCTGCCTaGACAATGGCCGGTGGCACCTGGCCCCAGAGCACCAGGAACCAC +
Preference number: 5 (lower is better)
Translates to: SLPVSSCFFGLHTAA*TMAGGTWPQSTRNH
Trigger: GTGGTTCCTGGTGCTCTGGGGCCAGGTGCCACCGGCCATTGTCCAGGCAGCTGTGTGCAAGCCAAAGAAGCATGAGGACACTGGAAGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505596.1
CDS-3UTR CAA 90 bp CTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGTCATGCTTCTTTGGCTaGCACACAGCTGCCTGGACA +
Preference number: 5 (lower is better)
Translates to: LAGERDGAAVDGAAEMAESCFFG*HTAAWT
Trigger: TGTCCAGGCAGCTGTGTGCAAGCCAAAGAAGCATGA...CTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CAA 90 bp GGGGTCCCGTGGGCATTTATAGGGCTCAAGATAGAGGAAAAGGCAGCCGAGATCTCCAGGGCCTCACGCTaGGAGGAGGCTCTGGTCAGG +
Preference number: 5 (lower is better)
Translates to: GVPWAFIGLKIEEKAAEISRASR*EEALVR
Trigger: CCTGACCAGAGCCTCCTCCAAGCGTGAGGCCCTGGA...GATCTCGGCTGCCTTTTCCTCTATCTTGAGCCCTATAAATGCCCACGGGACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CAA 90 bp GCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGAGGAGGTCTCTAAGATCCCGGTaGAAGTCTTGCAGCCTCCTC +
Preference number: 5 (lower is better)
Translates to: AAVDGAAEMAESGTGQRRSLRSR*KSCSLL
Trigger: GAGGAGGCTGCAAGACTTCAACCGGGATCTTAGAGA...CCTCCTCTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CAA 90 bp GGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGAGGTCTCTAAGATCCCGGTaGAAGTCTTGCAGCCTCCTC +
Preference number: 5 (lower is better)
Translates to: GAAVDGAAEMAESGTGQRSLRSR*KSCSLL
Trigger: GAGGAGGCTGCAAGACTTCAACCGGGATCTTAGAGA...CCTCTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CAA 90 bp CCTGGGCACTGTTTTGTGATGGGGGCTCCATTCAGAGGACTATTTGACTCTTGTGCCCGGCCCTGCGCATaGCCCAGAGCCTGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: PGHCFVMGAPFRGLFDSCARPCA*PRACSS
Trigger: GCTGGAGCAGGCTCTGGGCAATGCGCAGGGCCGGGC...ACAAGAGTCAAATAGTCCTCTGAATGGAGCCCCCATCACAAAACAGTGCCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CAA 90 bp ACCACAGCGTGTGGCCGAACAAAGCTGATTAGAACACAGCCCTACCTCGGGAGGTGTGCACGCAGGGCCTaGAGTTCCTGCTCCAGGCGA +
Preference number: 5 (lower is better)
Translates to: TTACGRTKLIRTQPYLGRCARRA*SSCSRR
Trigger: TCGCCTGGAGCAGGAACTCAAGGCCCTGCGTGCACA...CCTCCCGAGGTAGGGCTGTGTTCTAATCAGCTTTGTTCGGCCACACGCTGTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249883.10
CDS GCA 90 bp GAGGAGTCTTCCAGTGTCCTCATGCTTCTTTGGCTTGCACACAGCTaGCTGGACAATGGCCGGTGGCACCTGGCCCCAGAGCACCTAATC +
Preference number: 5 (lower is better)
Translates to: EESSSVLMLLWLAHS*LDNGRWHLAPEHLI
Trigger: GATTAGGTGCTCTGGGGCCAGGTGCCACCGGCCATTGTCCAGGCAGCTGTGTGCAAGCCAAAGAAGCATGAGGACACTGGAAGACTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502491.1
CDS GCA 90 bp TGGTGGGATGGTCAGAAGCTTGTAGCCTCCGGAAGTAGAATAGACTaGTGGGACCAGCAAGCAACGGTCCCATCGGCTGCCCCAAGGACC +
Preference number: 5 (lower is better)
Translates to: WWDGQKLVASGSRID*WDQQATVPSAAPRT
Trigger: GGTCCTTGGGGCAGCCGATGGGACCGTTGCTTGCTGGTCCCAGCAGTCTATTCTACTTCCGGAGGCTACAAGCTTCTGACCATCCCACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506326.1
CDS-3UTR CAA 90 bp AGTGTCTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGTCATGCTTCTTTGGCTaGCACACAGCTGCCTGGACA +
Preference number: 5 (lower is better)
Translates to: SVWLGKGTEQRLTGLLKWSCFFG*HTAAWT
Trigger: TGTCCAGGCAGCTGTGTGCAAGCCAAAGAAGCATGA...CCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAGACACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CAA 90 bp GCAGAGGGAGCTCAGCTCCTTTCTGAGCTGTCAGTTGCTACCCCAGTAGCAGGCGTACTGCTGCTGCTGTaGGAGGAACACAGGAGGCAC +
Preference number: 5 (lower is better)
Translates to: AEGAQLLSELSVATPVAGVLLLL*EEHRRH
Trigger: GTGCCTCCTGTGTTCCTCCAACAGCAGCAGCAGTAC...GCCTGCTACTGGGGTAGCAACTGACAGCTCAGAAAGGAGCTGAGCTCCCTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CAA 90 bp GAGTGTCTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGTCTCTAAGATCCCGGTaGAAGTCTTGCAGCCTCCTC +
Preference number: 5 (lower is better)
Translates to: ECLAGERDGAAVDGAAEMSLRSR*KSCSLL
Trigger: GAGGAGGCTGCAAGACTTCAACCGGGATCTTAGAGA...CATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAGACACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CAA 90 bp GAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGAGGATTGCCAGGCGGCGATTaGCAGATTCCAATCTCTCTC +
Preference number: 5 (lower is better)
Translates to: EQRLTGLLKWLRVAQGRGLPGGD*QIPISL
Trigger: GAGAGAGATTGGAATCTGCAAATCGCCGCCTGGCAA...TCCTCTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CAA 90 bp AGTGTCTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGTTGCCAGGCGGCGATTaGCAGATTCCAATCTCTCTC +
Preference number: 5 (lower is better)
Translates to: SVWLGKGTEQRLTGLLKWLPGGD*QIPISL
Trigger: GAGAGAGATTGGAATCTGCAAATCGCCGCCTGGCAA...CCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAGACACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CAA 90 bp CAAGAGGCTGGTGGTGGGGGTCCCGTGGGCATTTATAGGGCTCAAGATAGAGGACCTCCTGTGTCTTGCTaGCCAGGCGGCGATTTGCAG +
Preference number: 5 (lower is better)
Translates to: QEAGGGGPVGIYRAQDRGPPVSC*PGGDLQ
Trigger: CTGCAAATCGCCGCCTGGCAAGCAAGACACAGGAGG...TCCTCTATCTTGAGCCCTATAAATGCCCACGGGACCCCCACCACCAGCCTCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CAA 90 bp CCTCCTGGGCACTGTTTTGTGATGGGGGCTCCATTCAGAGGACTATTTGACTCTACAGATGGCACCGACTaGGCAGGCCGCAGGGAGCCC +
Preference number: 5 (lower is better)
Translates to: PPGHCFVMGAPFRGLFDSTDGTD*AGRREP
Trigger: GGGCTCCCTGCGGCCTGCCAAGTCGGTGCCATCTGT...AGAGTCAAATAGTCCTCTGAATGGAGCCCCCATCACAAAACAGTGCCCAGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CAA 90 bp CAGCCTCCTGGGCACTGTTTTGTGATGGGGGCTCCATTCAGAGGACTATTTGACGGGACGGAGCAGCGGTaGACGGGGCTGCTGAAATGG +
Preference number: 5 (lower is better)
Translates to: QPPGHCFVMGAPFRGLFDGTEQR*TGLLKW
Trigger: CCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCC...GTCAAATAGTCCTCTGAATGGAGCCCCCATCACAAAACAGTGCCCAGGAGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CAA 90 bp CTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGGAAGAGCAGATGACGTaGGCTGGAACCAAACTTAGC +
Preference number: 5 (lower is better)
Translates to: LAGERDGAAVDGAAEMAEEEQMT*AGTKLS
Trigger: GCTAAGTTTGGTTCCAGCCAACGTCATCTGCTCTTC...CTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS CCA 90 bp TGGGATGGTCAGAAGCTTGTAGCCTCCGGAAGTAGAATAGACTGCTaGGACCAGCAAGCAACGGTCCCATCGGCTGCCCCAAGGACCAGA +
Preference number: 5 (lower is better)
Translates to: WDGQKLVASGSRIDC*DQQATVPSAAPRTR
Trigger: TCTGGTCCTTGGGGCAGCCGATGGGACCGTTGCTTGCTGGTCCCAGCAGTCTATTCTACTTCCGGAGGCTACAAGCTTCTGACCATCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506326.1
CDS CCA 90 bp AGTCTTCCAGTGTCCTCATGCTTCTTTGGCTTGCACACAGCTGCCTaGACAATGGCCGGTGGCACCTGGCCCCAGAGCACCCAACTGAAT +
Preference number: 5 (lower is better)
Translates to: SLPVSSCFFGLHTAA*TMAGGTWPQSTQLN
Trigger: ATTCAGTTGGGTGCTCTGGGGCCAGGTGCCACCGGCCATTGTCCAGGCAGCTGTGTGCAAGCCAAAGAAGCATGAGGACACTGGAAGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514516.5
CDS-3UTR CAA 90 bp TGTCTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTATCCCGGTTGAAGTCTaGCAGCCTCCTCATTTCACT +
Preference number: 5 (lower is better)
Translates to: CLAGERDGAAVDGAAEMAIPVEV*QPPHFT
Trigger: AGTGAAATGAGGAGGCTGCAAGACTTCAACCGGGAT...AGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CAA 90 bp TGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAATCCCGGTTGAAGTCTaGCAGCCTCCTCATTTCACT +
Preference number: 5 (lower is better)
Translates to: WLGKGTEQRLTGLLKWLRIPVEV*QPPHFT
Trigger: AGTGAAATGAGGAGGCTGCAAGACTTCAACCGGGAT...TCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CAA 90 bp GAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACATTGCCAGGCGGCGATTaGCAGATTCCAATCTCTCTC +
Preference number: 5 (lower is better)
Translates to: ERDGAAVDGAAEMAESGTLPGGD*QIPISL
Trigger: GAGAGAGATTGGAATCTGCAAATCGCCGCCTGGCAA...TGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CAA 90 bp GAGCTGTCAGTTGCTACCCCAGTAGCAGGCCTTGGGCAAGAAGTCAAGGCTGAACCTCCTGTGTCTTGCTaGCCAGGCGGCGATTTGCAG +
Preference number: 5 (lower is better)
Translates to: ELSVATPVAGLGQEVKAEPPVSC*PGGDLQ
Trigger: CTGCAAATCGCCGCCTGGCAAGCAAGACACAGGAGG...TTCAGCCTTGACTTCTTGCCCAAGGCCTGCTACTGGGGTAGCAACTGACAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CAA 90 bp GGCATTTATAGGGCTCAAGATAGAGGAAAAGGCAGCCGAGATCCTGGGAATCGAACAGATGGCACCGACTaGGCAGGCCGCAGGGAGCCC +
Preference number: 5 (lower is better)
Translates to: GIYRAQDRGKGSRDPGNRTDGTD*AGRREP
Trigger: GGGCTCCCTGCGGCCTGCCAAGTCGGTGCCATCTGT...TCGATTCCCAGGATCTCGGCTGCCTTTTCCTCTATCTTGAGCCCTATAAATGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CAA 90 bp CAGCCTCCTGGGCACTGTTTTGTGATGGGGGCTCCATTCAGAGGACTATTTGACTCTCTGCTCCCGTGTTaGGCATGGGCAGCAGGGGGA +
Preference number: 5 (lower is better)
Translates to: QPPGHCFVMGAPFRGLFDSLLPC*AWAAGG
Trigger: TCCCCCTGCTGCCCATGCCAAACACGGGAGCAGAGA...GTCAAATAGTCCTCTGAATGGAGCCCCCATCACAAAACAGTGCCCAGGAGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CAA 90 bp TGTCTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAAGAGCAGATGACGTaGGCTGGAACCAAACTTAGC +
Preference number: 5 (lower is better)
Translates to: CLAGERDGAAVDGAAEMAEEQMT*AGTKLS
Trigger: GCTAAGTTTGGTTCCAGCCAACGTCATCTGCTCTTC...AGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS CCA 90 bp TTGGAGGAGGCTCTGGTCAGGCTCTCATGGGCCTCAGAGAGCCGCTaGATTTCGCTTTCCAGCTGCAAGAGTCAGACAGCAGAGCTGAAT +
Preference number: 5 (lower is better)
Translates to: LEEALVRLSWASESR*ISLSSCKSQTAELN
Trigger: ATTCAGCTCTGCTGTCTGACTCTTGCAGCTGGAAAGCGAAATCCAGCGGCTCTCTGAGGCCCATGAGAGCCTGACCAGAGCCTCCTCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506326.1
CDS-3UTR CAA 90 bp AGTGTCTGGCTGGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGATTTCACTGTCCATCTaGTTCCGCATGGTCTTCTCC +
Preference number: 5 (lower is better)
Translates to: SVWLGKGTEQRLTGLLKWISLSI*FRMVFS
Trigger: GGAGAAGACCATGCGGAACAAGATGGACAGTGAAAT...CCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCCAGCCAGACACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CAA 90 bp GAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAGGGCAGAGGAATTTCACTGTCCATCTaGTTCCGCATGGTCTTCTCC +
Preference number: 5 (lower is better)
Translates to: EQRLTGLLKWLRVAQGRGISLSI*FRMVFS
Trigger: GGAGAAGACCATGCGGAACAAGATGGACAGTGAAAT...TCCTCTGCCCTGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CAA 90 bp GAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCACAATCCCGGTTGAAGTCTaGCAGCCTCCTCATTTCACT +
Preference number: 5 (lower is better)
Translates to: ERDGAAVDGAAEMAESGTIPVEV*QPPHFT
Trigger: AGTGAAATGAGGAGGCTGCAAGACTTCAACCGGGAT...TGTGCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS-3UTR CAA 90 bp CAAGAGGCTGGTGGTGGGGGTCCCGTGGGCATTTATAGGGCTCAAGATAGAGGAAGGGGCGTCTGCTGTTaGTCGCTCACTAGAAGAGAG +
Preference number: 5 (lower is better)
Translates to: QEAGGGGPVGIYRAQDRGRGVCC*SLTRRE
Trigger: CTCTCTTCTAGTGAGCGACAAACAGCAGACGCCCCT...TCCTCTATCTTGAGCCCTATAAATGCCCACGGGACCCCCACCACCAGCCTCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CAA 90 bp GGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCAGAACATGCACATTCTaGAATGTCCTCTGCATGGTG +
Preference number: 5 (lower is better)
Translates to: GERDGAAVDGAAEMAESGRTCTF*NVLCMV
Trigger: CACCATGCAGAGGACATTCAAGAATGTGCATGTTCT...GCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249883.10
CDS TCA 90 bp CTGGATTTCGCTTTCCAGCTGCAAGAGTCAGACAGCAGAGCTGAATaGAGGCGAGAGCTCCCAGGGAGTGATTCGAGGCTGACCCACTAC +
Preference number: 5 (lower is better)
Translates to: LDFAFQLQESDSRAE*RRELPGSDSRLTHY
Trigger: GTAGTGGGTCAGCCTCGAATCACTCCCTGGGAGCTCTCGCCTTCATTCAGCTCTGCTGTCTGACTCTTGCAGCTGGAAAGCGAAATCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506326.1
CDS-3UTR CAA 90 bp ACCACAGCGTGTGGCCGAACAAAGCTGATTAGAACACAGCCCTACCTCGGGAGGTCATGCTTCTTTGGCTaGCACACAGCTGCCTGGACA +
Preference number: 5 (lower is better)
Translates to: TTACGRTKLIRTQPYLGRSCFFG*HTAAWT
Trigger: TGTCCAGGCAGCTGTGTGCAAGCCAAAGAAGCATGA...CCTCCCGAGGTAGGGCTGTGTTCTAATCAGCTTTGTTCGGCCACACGCTGTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249883.10
CDS-3UTR CAA 90 bp AGGCAGCCGAGATCCTGGGAATCGAGCAGCTTTAACATCCACGGGCCAGGAACTTCATGCTTCTTTGGCTaGCACACAGCTGCCTGGACA +
Preference number: 5 (lower is better)
Translates to: RQPRSWESSSFNIHGPGTSCFFG*HTAAWT
Trigger: TGTCCAGGCAGCTGTGTGCAAGCCAAAGAAGCATGA...AGTTCCTGGCCCGTGGATGTTAAAGCTGCTCGATTCCCAGGATCTCGGCTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CAA 90 bp GAGAACAATATGGCTGACTTGATTAGTGAACCAGTCCACCTGGTGTCCACGGGCCCTCCTGTGTCTTGCTaGCCAGGCGGCGATTTGCAG +
Preference number: 5 (lower is better)
Translates to: ENNMADLISEPVHLVSTGPPVSC*PGGDLQ
Trigger: CTGCAAATCGCCGCCTGGCAAGCAAGACACAGGAGG...GCCCGTGGACACCAGGTGGACTGGTTCACTAATCAAGTCAGCCATATTGTTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CAA 90 bp GAGCTGTCAGTTGCTACCCCAGTAGCAGGCCTTGGGCAAGAAGTCAAGGCTGAAAGGGGCGTCTGCTGTTaGTCGCTCACTAGAAGAGAG +
Preference number: 5 (lower is better)
Translates to: ELSVATPVAGLGQEVKAERGVCC*SLTRRE
Trigger: CTCTCTTCTAGTGAGCGACAAACAGCAGACGCCCCT...TTCAGCCTTGACTTCTTGCCCAAGGCCTGCTACTGGGGTAGCAACTGACAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CAA 90 bp CCTGGGCACTGTTTTGTGATGGGGGCTCCATTCAGAGGACTATTTGACTCTTGTTCTCTGCTCCCGTGTTaGGCATGGGCAGCAGGGGGA +
Preference number: 5 (lower is better)
Translates to: PGHCFVMGAPFRGLFDSCSLLPC*AWAAGG
Trigger: TCCCCCTGCTGCCCATGCCAAACACGGGAGCAGAGA...ACAAGAGTCAAATAGTCCTCTGAATGGAGCCCCCATCACAAAACAGTGCCCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CAA 90 bp GGGGAAAGGGACGGAGCAGCGGTTGACGGGGCTGCTGAAATGGCTGAGAGTGGCAACAATATGGCTGACTaGATTAGTGAACCAGTCCAC +
Preference number: 5 (lower is better)
Translates to: GERDGAAVDGAAEMAESGNNMAD*ISEPVH
Trigger: GTGGACTGGTTCACTAATCAAGTCAGCCATATTGTT...GCCACTCTCAGCCATTTCAGCAGCCCCGTCAACCGCTGCTCCGTCCCTTTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CAA 90 bp GACCAAACTGACAGGATGTTCCAGGGACAGGAGCTGTGGAGCCACTTCAAGAGGTGTCCTCATGCTTCTTaGGCTTGCACACAGCTGCCT +
Preference number: 5 (lower is better)
Translates to: DQTDRMFQGQELWSHFKRCPHAS*ACTQLP
Trigger: AGGCAGCTGTGTGCAAGCCAAAGAAGCATGAGGACA...CCTCTTGAAGTGGCTCCACAGCTCCTGTCCCTGGAACATCCTGTCAGTTTGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CAA 90 bp GAATCCTCATTCTCCATAAGGCCCGGAGGAATGTGGGCTAAGAAGCAGAGTCTTCCACGGGCCAGGAACTaGAGGAGGAGGCATAACTGG +
Preference number: 5 (lower is better)
Translates to: ESSFSIRPGGMWAKKQSLPRARN*RRRHNW
Trigger: CCAGTTATGCCTCCTCCTCAAGTTCCTGGCCCGTGG...AAGACTCTGCTTCTTAGCCCACATTCCTCCGGGCCTTATGGAGAATGAGGATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CAA 90 bp TTTAGGGCGCTGGGCATGGGTAGCTTGAGGAGCCAGCCTCCTGGGCACTGTTTTCAACCACTGGGCTGCTaGGTTTCTCATTCTCAAAAC +
Preference number: 5 (lower is better)
Translates to: FRALGMGSLRSQPPGHCFQPLGC*VSHSQN
Trigger: GTTTTGAGAATGAGAAACCAAGCAGCCCAGTGGTTG...AAAACAGTGCCCAGGAGGCTGGCTCCTCAAGCTACCCATGCCCAGCGCCCTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514516.5
CDS TCA 90 bp CAAGCACCCTCCAACGGAGTTCTGTTATCATCCCTGTGTTGTAAATaGGGACACCAGGGCTCAGAGAGCTTAAGCAGCGTGCCCAGAGTC +
Preference number: 5 (lower is better)
Translates to: QAPSNGVLLSSLCCK*GHQGSESLSSVPRV
Trigger: GACTCTGGGCACGCTGCTTAAGCTCTCTGAGCCCTGGTGTCCTCATTTACAACACAGGGATGATAACAGAACTCCGTTGGAGGGTGCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514516.5
CDS-3UTR CAA 90 bp GGCATTTATAGGGCTCAAGATAGAGGAAAAGGCAGCCGAGATCCTGGGAATCGAGTACTGCTGCTGCTGTaGGAGGAACACAGGAGGCAC +
Preference number: 5 (lower is better)
Translates to: GIYRAQDRGKGSRDPGNRVLLLL*EEHRRH
Trigger: GTGCCTCCTGTGTTCCTCCAACAGCAGCAGCAGTAC...TCGATTCCCAGGATCTCGGCTGCCTTTTCCTCTATCTTGAGCCCTATAAATGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CAA 90 bp CAAGAGGCTGGTGGTGGGGGTCCCGTGGGCATTTATAGGGCTCAAGATAGAGGAATTTCACTGTCCATCTaGTTCCGCATGGTCTTCTCC +
Preference number: 5 (lower is better)
Translates to: QEAGGGGPVGIYRAQDRGISLSI*FRMVFS
Trigger: GGAGAAGACCATGCGGAACAAGATGGACAGTGAAAT...TCCTCTATCTTGAGCCCTATAAATGCCCACGGGACCCCCACCACCAGCCTCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CAA 90 bp GAGCTGTCAGTTGCTACCCCAGTAGCAGGCCTTGGGCAAGAAGTCAAGGCTGAAGAAGAGCAGATGACGTaGGCTGGAACCAAACTTAGC +
Preference number: 5 (lower is better)
Translates to: ELSVATPVAGLGQEVKAEEEQMT*AGTKLS
Trigger: GCTAAGTTTGGTTCCAGCCAACGTCATCTGCTCTTC...TTCAGCCTTGACTTCTTGCCCAAGGCCTGCTACTGGGGTAGCAACTGACAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS TCA 90 bp AAGGTGACAGATGAGAGGCCACCAAACAGGAGCAAAACCTCCAGGTaGCTATGGTGGGATGGTCAGAAGCTTGTAGCCTCCGGAAGTAGA +
Preference number: 5 (lower is better)
Translates to: KVTDERPPNRSKTSR*LWWDGQKLVASGSR
Trigger: TCTACTTCCGGAGGCTACAAGCTTCTGACCATCCCACCATAGTCACCTGGAGGTTTTGCTCCTGTTTGGTGGCCTCTCATCTGTCACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506326.1
CDS CCA 90 bp CACAGCTTCCCTGTGCCCAGTGTCCAGAAGGAAACATTCTACTCTTaGCTGGCTTCCACCAAGAAACTGAGTACAGTTGGCCAGAAGTGG +
Preference number: 5 (lower is better)
Translates to: HSFPVPSVQKETFYS*LASTKKLSTVGQKW
Trigger: CCACTTCTGGCCAACTGTACTCAGTTTCTTGGTGGAAGCCAGCCAAGAGTAGAATGTTTCCTTCTGGACACTGGGCACAGGGAAGCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506326.1
CDS-3UTR CAA 90 bp TTTGCTCCTCTCCCAAACCCTCCAGGTGGGAATGAAGACACTTATGCTAACAAGGTACTGCTGCTGCTGTaGGAGGAACACAGGAGGCAC +
Preference number: 5 (lower is better)
Translates to: FAPLPNPPGGNEDTYANKVLLLL*EEHRRH
Trigger: GTGCCTCCTGTGTTCCTCCAACAGCAGCAGCAGTAC...CTTGTTAGCATAAGTGTCTTCATTCCCACCTGGAGGGTTTGGGAGAGGAGCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CAA 90 bp CAGCCTCCTGGGCACTGTTTTGTGATGGGGGCTCCATTCAGAGGACTATTTGACATCCCGGTTGAAGTCTaGCAGCCTCCTCATTTCACT +
Preference number: 5 (lower is better)
Translates to: QPPGHCFVMGAPFRGLFDIPVEV*QPPHFT
Trigger: AGTGAAATGAGGAGGCTGCAAGACTTCAACCGGGAT...GTCAAATAGTCCTCTGAATGGAGCCCCCATCACAAAACAGTGCCCAGGAGGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CAA 90 bp GGAGACACATCGGAACCTGCAGGCCTCAGTCTTCTGTTCCACAAGAAAGGGAATTTGCCAGGCGGCGATTaGCAGATTCCAATCTCTCTC +
Preference number: 5 (lower is better)
Translates to: GDTSEPAGLSLLFHKKGNLPGGD*QIPISL
Trigger: GAGAGAGATTGGAATCTGCAAATCGCCGCCTGGCAA...ATTCCCTTTCTTGTGGAACAGAAGACTGAGGCCTGCAGGTTCCGATGTGTCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CAA 90 bp GGCATTTATAGGGCTCAAGATAGAGGAAAAGGCAGCCGAGATCCTGGGAATCGAAGGGGCGTCTGCTGTTaGTCGCTCACTAGAAGAGAG +
Preference number: 5 (lower is better)
Translates to: GIYRAQDRGKGSRDPGNRRGVCC*SLTRRE
Trigger: CTCTCTTCTAGTGAGCGACAAACAGCAGACGCCCCT...TCGATTCCCAGGATCTCGGCTGCCTTTTCCTCTATCTTGAGCCCTATAAATGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS TCA 90 bp TCCAGAAGGAAACATTCTACTCTTGGCTGGCTTCCACCAAGAAACTaGGTACAGTTGGCCAGAAGTGGGCACCGAAAGACTCCAGCCATG +
Preference number: 5 (lower is better)
Translates to: SRRKHSTLGWLPPRN*VQLARSGHRKTPAM
Trigger: CATGGCTGGAGTCTTTCGGTGCCCACTTCTGGCCAACTGTACTCAGTTTCTTGGTGGAAGCCAGCCAAGAGTAGAATGTTTCCTTCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506326.1
CDS-3UTR CAA 90 bp CCTCCTGGGCACTGTTTTGTGATGGGGGCTCCATTCAGAGGACTATTTGACTCTAGGATAAAGCCATCTTaGGACACCCACTCCCACTGT +
Preference number: 5 (lower is better)
Translates to: PPGHCFVMGAPFRGLFDSRIKPS*DTHSHC
Trigger: ACAGTGGGAGTGGGTGTCCAAAGATGGCTTTATCCT...AGAGTCAAATAGTCCTCTGAATGGAGCCCCCATCACAAAACAGTGCCCAGGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249883.10
CDS-3UTR CAA 90 bp ACAAGACATCTCCAGTTTCTCAGAAAGAACTGGTACCGGGTAGGGCCACCGAAGATTTCACTGTCCATCTaGTTCCGCATGGTCTTCTCC +
Preference number: 5 (lower is better)
Translates to: TRHLQFLRKNWYRVGPPKISLSI*FRMVFS
Trigger: GGAGAAGACCATGCGGAACAAGATGGACAGTGAAAT...CTTCGGTGGCCCTACCCGGTACCAGTTCTTTCTGAGAAACTGGAGATGTCTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CAA 90 bp AAATACTGTTATACCCAGTGGAATGCGGCAGCAATCCTGGTACAGGGTGGCATATCTCTAAGATCCCGGTaGAAGTCTTGCAGCCTCCTC +
Preference number: 5 (lower is better)
Translates to: KYCYTQWNAAAILVQGGISLRSR*KSCSLL
Trigger: GAGGAGGCTGCAAGACTTCAACCGGGATCTTAGAGA...TATGCCACCCTGTACCAGGATTGCTGCCGCATTCCACTGGGTATAACAGTATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000514516.5
CDS-3UTR CAA 90 bp CTGGCCTTCTGGATGGTTTCGGACAAAACTTTATGTGCTAGGTGGGAGTGGGAAAACAATATGGCTGACTaGATTAGTGAACCAGTCCAC +
Preference number: 5 (lower is better)
Translates to: LAFWMVSDKTLCARWEWENNMAD*ISEPVH
Trigger: GTGGACTGGTTCACTAATCAAGTCAGCCATATTGTT...TTCCCACTCCCACCTAGCACATAAAGTTTTGTCCGAAACCATCCAGAAGGCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249883.10
CDS-3UTR CAA 90 bp GGCATTTATAGGGCTCAAGATAGAGGAAAAGGCAGCCGAGATCCTGGGAATCGATTCTATCTTGGGTCCTaGAAGAGATTGGACTATGAC +
Preference number: 5 (lower is better)
Translates to: GIYRAQDRGKGSRDPGNRFYLGS*KRLDYD
Trigger: GTCATAGTCCAATCTCTTCAAGGACCCAAGATAGAA...TCGATTCCCAGGATCTCGGCTGCCTTTTCCTCTATCTTGAGCCCTATAAATGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249883.10
CDS CCA 72 bp GGGCGGACCTGGAGCACCGGTGGCCGCTGGTACGCCTaGGGCGAGCCGGTGAGGGTAGCCCGAGGCCCGGAG +
Preference number: 6 (lower is better)
Translates to: GRTWSTGGRWYA*GEPVRVARGPE
Trigger: CTCCGGGCCTCGGGCTACCCTCACCGGCTCGCCCCAGGCGTACCAGCGGCCACCGGTGCTCCAGGTCCGCCC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515172.1
CDS CCA 72 bp GCCCCACCACGAGCCCGGGCGGACCTGGAGCACCGGTaGCCGCTGGTACGCCTGGGGCGAGCCGGTGAGGGT +
Preference number: 6 (lower is better)
Translates to: APPRARADLEHR*PLVRLGRAGEG
Trigger: ACCCTCACCGGCTCGCCCCAGGCGTACCAGCGGCCACCGGTGCTCCAGGTCCGCCCGGGCTCGTGGTGGGGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515172.1
CDS CAA 90 bp GCCCCGCAAAGCCCAGCGCGCTGCGCTCCCTGGGCAGAGCGGCCCTaGCCAGGCACTGCGGCTGCCTCGAAAGGGCGCACTGCGCCCCGA +
Preference number: 6 (lower is better)
Translates to: APQSPARCAPWAERP*PGTAAASKGRTAPR
Trigger: TCGGGGCGCAGTGCGCCCTTTCGAGGCAGCCGCAGTGCCTGGCAAGGGCCGCTCTGCCCAGGGAGCGCAGCGCGCTGGGCTTTGCGGGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502491.1
CDS CCA 72 bp CTGCTCGCCTGGAGCACCGGTGGCCGCTGGTACGCCTaGGGCGAGCCGGTGAGGGTAGCCCGAGGCCCGGAG +
Preference number: 6 (lower is better)
Translates to: LLAWSTGGRWYA*GEPVRVARGPE
Trigger: CTCCGGGCCTCGGGCTACCCTCACCGGCTCGCCCCAGGCGTACCAGCGGCCACCGGTGCTCCAGGCGAGCAG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510560.1
CDS CCA 72 bp CACGAGCCCGGGCGGACCTGGAGCACCGGTGGCCGCTaGTACGCCTGGGGCGAGCCGGTGAGGGTAGCCCGA +
Preference number: 6 (lower is better)
Translates to: HEPGRTWSTGGR*YAWGEPVRVAR
Trigger: TCGGGCTACCCTCACCGGCTCGCCCCAGGCGTACCAGCGGCCACCGGTGCTCCAGGTCCGCCCGGGCTCGTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515172.1
CDS GCA 72 bp GCTCGAGCTGCCCGGCCCTGCGCATTGCCCAGAGCCTaGTCCAGCAGCTCGGCACGCCGCCGCTGGTCCTCG +
Preference number: 6 (lower is better)
Translates to: ARAARPCALPRA*SSSSARRRWSS
Trigger: CGAGGACCAGCGGCGGCGTGCCGAGCTGCTGGAGCAGGCTCTGGGCAATGCGCAGGGCCGGGCAGCTCGAGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000506326.1
ENST00000513145.1
ENST00000514516.5
CDS CCA 72 bp CAGAGCACCTGGAGCACCGGTGGCCGCTGGTACGCCTaGGGCGAGCCGGTGAGGGTAGCCCGAGGCCCGGAG +
Preference number: 6 (lower is better)
Translates to: QSTWSTGGRWYA*GEPVRVARGPE
Trigger: CTCCGGGCCTCGGGCTACCCTCACCGGCTCGCCCCAGGCGTACCAGCGGCCACCGGTGCTCCAGGTGCTCTG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504234.1
CDS CCA 72 bp CCTGGGCTCCTGCTCGCCTGGAGCACCGGTGGCCGCTaGTACGCCTGGGGCGAGCCGGTGAGGGTAGCCCGA +
Preference number: 6 (lower is better)
Translates to: PGLLLAWSTGGR*YAWGEPVRVAR
Trigger: TCGGGCTACCCTCACCGGCTCGCCCCAGGCGTACCAGCGGCCACCGGTGCTCCAGGCGAGCAGGAGCCCAGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510560.1
CDS GCA 72 bp GGCACCTGGCCCCAGAGCACCGCTGCGGCCCGAGGGTaGCCAGCGCAGTCAGACACCACAACCTCCGGCTCG +
Preference number: 6 (lower is better)
Translates to: GTWPQSTAAARG*PAQSDTTTSGS
Trigger: CGAGCCGGAGGTTGTGGTGTCTGACTGCGCTGGGCACCCTCGGGCCGCAGCGGTGCTCTGGGGCCAGGTGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000511759.1
ENST00000512955.1
ENST00000513145.1
CDS CCA 72 bp TCTAGAGCCCCGCAAAGCCCAGCGCGCTGCGCTCCCTaGGCAGAGCGGCCCTTGCCAGGCACTGCGGCTGCC +
Preference number: 6 (lower is better)
Translates to: SRAPQSPARCAP*AERPLPGTAAA
Trigger: GGCAGCCGCAGTGCCTGGCAAGGGCCGCTCTGCCCAGGGAGCGCAGCGCGCTGGGCTTTGCGGGGCTCTAGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502491.1
CDS CCA 72 bp GGCGAAGATGTGTTCTCGGCCGTGGCGCCGACGCTCTaGCTGTTCGCGCCCCAGCGCGCAGCCCCAGGGTCG +
Preference number: 6 (lower is better)
Translates to: GEDVFSAVAPTL*LFAPQRAAPGS
Trigger: CGACCCTGGGGCTGCGCGCTGGGGCGCGAACAGCCAGAGCGTCGGCGCCACGGCCGAGAACACATCTTCGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511759.1
ENST00000512955.1
CDS GCA 72 bp GACAATGGCCGGTGGCACCTGGCCCCAGAGCACCGCTaGGGCCCGAGGGTGCCCAGCGCAGTCAGACACCAC +
Preference number: 6 (lower is better)
Translates to: DNGRWHLAPEHR*GPRVPSAVRHH
Trigger: GTGGTGTCTGACTGCGCTGGGCACCCTCGGGCCGCAGCGGTGCTCTGGGGCCAGGTGCCACCGGCCATTGTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000511759.1
ENST00000512955.1
ENST00000513145.1
CDS GCA 72 bp CCGCGCGTTTCTAGAGCCCCGCAAAGCCCAGCGCGCTaGGCTCCCTGGGCAGAGCGGCCCTTGCCAGGCACT +
Preference number: 6 (lower is better)
Translates to: PRVSRAPQSPAR*APWAERPLPGT
Trigger: AGTGCCTGGCAAGGGCCGCTCTGCCCAGGGAGCGCAGCGCGCTGGGCTTTGCGGGGCTCTAGAAACGCGCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502491.1
CDS CCA 72 bp GCTCCAGCAGCTCGGCACGCCGCCGCTGGTCCTCGATaGCGCCGCGCAGCAGTGCCATCTCTCGCTCCAGCT +
Preference number: 6 (lower is better)
Translates to: APAARHAAAGPR*RRAAVPSLAPA
Trigger: AGCTGGAGCGAGAGATGGCACTGCTGCGCGGCGCCATCGAGGACCAGCGGCGGCGTGCCGAGCTGCTGGAGC
72% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000506326.1
ENST00000513145.1
ENST00000514516.5
CDS CCA 72 bp CCCAGAGCCTGCTCCAGCAGCTCGGCACGCCGCCGCTaGTCCTCGATGGCGCCGCGCAGCAGTGCCATCTCT +
Preference number: 6 (lower is better)
Translates to: PRACSSSSARRR*SSMAPRSSAIS
Trigger: AGAGATGGCACTGCTGCGCGGCGCCATCGAGGACCAGCGGCGGCGTGCCGAGCTGCTGGAGCAGGCTCTGGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000506326.1
ENST00000513145.1
ENST00000514516.5
CDS CCA 72 bp CAGCTCAGCTCGGCGGCGAAGATGTGTTCTCGGCCGTaGCGCCGACGCTCTGGCTGTTCGCGCCCCAGCGCG +
Preference number: 6 (lower is better)
Translates to: QLSSAAKMCSRP*RRRSGCSRPSA
Trigger: CGCGCTGGGGCGCGAACAGCCAGAGCGTCGGCGCCACGGCCGAGAACACATCTTCGCCGCCGAGCTGAGCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511759.1
ENST00000512955.1
CDS CAA 72 bp AGCTCCTCTTCGGCTCGAGCTGCCCGGCCCTGCGCATaGCCCAGAGCCTGCTCCAGCAGCTCGGCACGCCGC +
Preference number: 6 (lower is better)
Translates to: SSSSARAARPCA*PRACSSSSARR
Trigger: GCGGCGTGCCGAGCTGCTGGAGCAGGCTCTGGGCAATGCGCAGGGCCGGGCAGCTCGAGCCGAAGAGGAGCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000506326.1
ENST00000513145.1
ENST00000514516.5
CDS GCA 72 bp CTTGCCAGGCACTGCGGCTGCCTCGAAAGGGCGCACTaGGCCCCGAGGACGCTCGATCCTCGAGGCTCCGAC +
Preference number: 6 (lower is better)
Translates to: LARHCGCLERAH*APRTLDPRGSD
Trigger: GTCGGAGCCTCGAGGATCGAGCGTCCTCGGGGCGCAGTGCGCCCTTTCGAGGCAGCCGCAGTGCCTGGCAAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502491.1
CDS GCA 72 bp CGCGCAGCCCCAGGGTCGGCCCGCGCCGGAGGCGGCTaGTATGCCAGGAATGTGAGAGTTTCAGGTTCCCCC +
Preference number: 6 (lower is better)
Translates to: RAAPGSARAGGG*YARNVRVSGSP
Trigger: GGGGGAACCTGAAACTCTCACATTCCTGGCATAGCAGCCGCCTCCGGCGCGGGCCGACCCTGGGGCTGCGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511759.1
ENST00000512955.1
CDS CCA 72 bp TTGCACACAGCTGCCTGGACAATGGCCGGTGGCACCTaGCCCCAGAGCACCGCTGCGGCCCGAGGGTGCCCA +
Preference number: 6 (lower is better)
Translates to: LHTAAWTMAGGT*PQSTAAARGCP
Trigger: TGGGCACCCTCGGGCCGCAGCGGTGCTCTGGGGCCAGGTGCCACCGGCCATTGTCCAGGCAGCTGTGTGCAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000511759.1
ENST00000512955.1
ENST00000513145.1
CDS GCA 72 bp AGCCCCAGGGTCGGCCCGCGCCGGAGGCGGCTGCTATaGCAGGAATGTGAGAGTTTCAGGTTCCCCCTCGGG +
Preference number: 6 (lower is better)
Translates to: SPRVGPRRRRLL*QECESFRFPLG
Trigger: CCCGAGGGGGAACCTGAAACTCTCACATTCCTGGCATAGCAGCCGCCTCCGGCGCGGGCCGACCCTGGGGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000511759.1
ENST00000512955.1
CDS CAA 90 bp CCCTGGGTTCCTGCTGCCGCAGCCGCGAAAACAGATGGCACCGACTaGGCAGGCCGCAGGGAGCCCTGGATGGCCTTGCCAGGGTCTCTC +
Preference number: 6 (lower is better)
Translates to: PWVPAAAAAKTDGTD*AGRREPWMALPGSL
Trigger: GAGAGACCCTGGCAAGGCCATCCAGGGCTCCCTGCGGCCTGCCAAGTCGGTGCCATCTGTTTTCGCGGCTGCGGCAGCAGGAACCCAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000506326.1
ENST00000513145.1
ENST00000514516.5
CDS GCA 72 bp ACGGGGATCTCGGTCCCCCGCATGTGGCCGGGTCCCTaGCTGCTGGGCCGCATAGTACTGCGAGTGGGCTTT +
Preference number: 6 (lower is better)
Translates to: TGISVPRMWPGP*LLGRIVLRVGF
Trigger: AAAGCCCACTCGCAGTACTATGCGGCCCAGCAGGCAGGGACCCGGCCACATGCGGGGGACCGAGATCCCCGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000504234.1
ENST00000505596.1
ENST00000510560.1
ENST00000513145.1
ENST00000514516.5
CDS CCA 72 bp CCAGCTGTGGGAAGCTGTGGGAGGAGCTCATGTGGCTaGGGGCCCGGGCGCCGTTCCTCTCCAGGGACAACT +
Preference number: 6 (lower is better)
Translates to: PAVGSCGRSSCG*GPGRRSSPGTT
Trigger: AGTTGTCCCTGGAGAGGAACGGCGCCCGGGCCCCCAGCCACATGAGCTCCTCCCACAGCTTCCCACAGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000510560.1
ENST00000513145.1
ENST00000514516.5
CDS CCA 72 bp ACAGATGGCACCGACTTGGCAGGCCGCAGGGAGCCCTaGATGGCCTTGCCAGGGTCTCTCCTGGAGCGCTGC +
Preference number: 6 (lower is better)
Translates to: TDGTDLAGRREP*MALPGSLLERC
Trigger: GCAGCGCTCCAGGAGAGACCCTGGCAAGGCCATCCAGGGCTCCCTGCGGCCTGCCAAGTCGGTGCCATCTGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000506326.1
ENST00000513145.1
ENST00000514516.5
CDS CCA 72 bp CTGCTGCCGCAGCCGCGAAAACAGATGGCACCGACTTaGCAGGCCGCAGGGAGCCCTGGATGGCCTTGCCAG +
Preference number: 6 (lower is better)
Translates to: LLPQPRKQMAPT*QAAGSPGWPCQ
Trigger: CTGGCAAGGCCATCCAGGGCTCCCTGCGGCCTGCCAAGTCGGTGCCATCTGTTTTCGCGGCTGCGGCAGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000506326.1
ENST00000513145.1
ENST00000514516.5
CDS CCA 72 bp GCCCTGGGTTCCTGCTGCCGCAGCCGCGAAAACAGATaGCACCGACTTGGCAGGCCGCAGGGAGCCCTGGAT +
Preference number: 6 (lower is better)
Translates to: ALGSCCRSRENR*HRLGRPQGALD
Trigger: ATCCAGGGCTCCCTGCGGCCTGCCAAGTCGGTGCCATCTGTTTTCGCGGCTGCGGCAGCAGGAACCCAGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000506326.1
ENST00000513145.1
ENST00000514516.5
CDS CCA 72 bp GACGGGACGACAGCAAGGGCTGTACCACGCGTGTCCTaGGGTTGCTGCGGGAGGGGACTCCGGCTGTGTGTG +
Preference number: 6 (lower is better)
Translates to: DGTTARAVPRVS*GCCGRGLRLCV
Trigger: CACACACAGCCGGAGTCCCCTCCCGCAGCAACCCCAGGACACGCGTGGTACAGCCCTTGCTGTCGTCCCGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506107.1
CDS CAA 72 bp CCTGCTGCCGCAGCCGCGAAAACAGATGGCACCGACTaGGCAGGCCGCAGGGAGCCCTGGATGGCCTTGCCA +
Preference number: 6 (lower is better)
Translates to: PAAAAAKTDGTD*AGRREPWMALP
Trigger: TGGCAAGGCCATCCAGGGCTCCCTGCGGCCTGCCAAGTCGGTGCCATCTGTTTTCGCGGCTGCGGCAGCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000506326.1
ENST00000513145.1
ENST00000514516.5
CDS TCA 72 bp GGGCACCTGCCTGTCTCTGCTGTGCACGCAGGGCCTTaGGTTCCTGCTCCAGGCGAGTCCGCAGACGCAGCT +
Preference number: 6 (lower is better)
Translates to: GHLPVSAVHAGP*VPAPGESADAA
Trigger: AGCTGCGTCTGCGGACTCGCCTGGAGCAGGAACTCAAGGCCCTGCGTGCACAGCAGAGACAGGCAGGTGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000506326.1
ENST00000514516.5
CDS GCA 72 bp CACCCCTCAGGGCCTGCTGCTGGATGGCTAGCAGCGTaGGCGTCTCAGTCAGGTTGCCGTAGCGCAGCTGCT +
Preference number: 6 (lower is better)
Translates to: HPSGPAAGWLAA*ASQSGCRSAAA
Trigger: AGCAGCTGCGCTACGGCAACCTGACTGAGACGCGCACGCTGCTAGCCATCCAGCAGCAGGCCCTGAGGGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000504234.1
ENST00000505596.1
ENST00000506107.1
ENST00000510560.1
ENST00000511759.1
ENST00000513145.1
ENST00000514516.5
ENST00000515172.1
CDS CCA 72 bp GAGCTCTGGAGACCCACCACTGCCACTGCTACCACCTaGGGCACCTGCCTGTCTCTGCTGTGCACGCAGGGC +
Preference number: 6 (lower is better)
Translates to: ELWRPTTATATT*GTCLSLLCTQG
Trigger: GCCCTGCGTGCACAGCAGAGACAGGCAGGTGCCCCAGGTGGTAGCAGTGGCAGTGGTGGGTCTCCAGAGCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000506326.1
ENST00000514516.5
CDS CCA 72 bp CACCTGGGCCTGCAGGATCCCCTCAGGGCCTGCTGCTaGATGGCTAGCAGCGTGCGCGTCTCAGTCAGGTTG +
Preference number: 6 (lower is better)
Translates to: HLGLQDPLRACC*MASSVRVSVRL
Trigger: CAACCTGACTGAGACGCGCACGCTGCTAGCCATCCAGCAGCAGGCCCTGAGGGGATCCTGCAGGCCCAGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512955.1
CDS TCA 72 bp CAATGGCCGGTGGCACCTGGCCCCAGAGCACCCAACTaGATCACCCGCCGCCAGGCGCTCTGTCCAGTTCTT +
Preference number: 6 (lower is better)
Translates to: QWPVAPGPRAPN*ITRRQALCPVL
Trigger: AAGAACTGGACAGAGCGCCTGGCGGCGGGTGATTCAGTTGGGTGCTCTGGGGCCAGGTGCCACCGGCCATTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514516.5
CDS GCA 72 bp ACGACAGCAAGGGCTGTACCACGCGTGTCCTGGGGTTaGTGCGGGAGGGGACTCCGGCTGTGTGTGTGTGTG +
Preference number: 6 (lower is better)
Translates to: TTARAVPRVSWG*CGRGLRLCVCV
Trigger: CACACACACACACAGCCGGAGTCCCCTCCCGCAGCAACCCCAGGACACGCGTGGTACAGCCCTTGCTGTCGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506107.1
CDS GCA 72 bp ATCCCCTCAGGGCCTGCTGCTGGATGGCTAGCAGCGTaGGCGTCTCAGTCAGGTTGCCGTAGCGCAGCTGCT +
Preference number: 6 (lower is better)
Translates to: IPSGPAAGWLAA*ASQSGCRSAAA
Trigger: AGCAGCTGCGCTACGGCAACCTGACTGAGACGCGCACGCTGCTAGCCATCCAGCAGCAGGCCCTGAGGGGAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512955.1
CDS CCA 72 bp CATGCTTCTTTGGCTTGCACACAGCTGCCTGGACAATaGCCGGTGGCACCTGGCCCCAGAGCACCGCTGCGG +
Preference number: 6 (lower is better)
Translates to: HASLACTQLPGQ*PVAPGPRAPLR
Trigger: CCGCAGCGGTGCTCTGGGGCCAGGTGCCACCGGCCATTGTCCAGGCAGCTGTGTGCAAGCCAAAGAAGCATG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000511759.1
ENST00000512955.1
ENST00000513145.1
CDS CCA 72 bp TTGCACACAGCTGCCTGGACAATGGCCGGTGGCACCTaGCCCCAGAGCACCCAACTGAATCACCCGCCGCCA +
Preference number: 6 (lower is better)
Translates to: LHTAAWTMAGGT*PQSTQLNHPPP
Trigger: TGGCGGCGGGTGATTCAGTTGGGTGCTCTGGGGCCAGGTGCCACCGGCCATTGTCCAGGCAGCTGTGTGCAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514516.5
CDS CAA 72 bp GACGACAGCAAGGGCTGTACCACGCGTGTCCTGGGGTaGCTGCGGGAGGGGACTCCGGCTGTGTGTGTGTGT +
Preference number: 6 (lower is better)
Translates to: DDSKGCTTRVLG*LREGTPAVCVC
Trigger: ACACACACACACAGCCGGAGTCCCCTCCCGCAGCAACCCCAGGACACGCGTGGTACAGCCCTTGCTGTCGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506107.1
CDS GCA 72 bp AGACTGCTGGGACCAGCAAGCAACGGTCCCATCGGCTaGCCCAAGGACCAGATGCTGAGTGAACCCAGGGCC +
Preference number: 6 (lower is better)
Translates to: RLLGPASNGPIG*PKDQMLSEPRA
Trigger: GGCCCTGGGTTCACTCAGCATCTGGTCCTTGGGGCAGCCGATGGGACCGTTGCTTGCTGGTCCCAGCAGTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506326.1
CDS CCA 72 bp GTCTGGGTGCTCCCATCTCTGCTCCCGTGTTTGGCATaGGCAGCAGGGGGAGCTGTGACCACTGGCTCCTCT +
Preference number: 6 (lower is better)
Translates to: VWVLPSLLPCLA*AAGGAVTTGSS
Trigger: AGAGGAGCCAGTGGTCACAGCTCCCCCTGCTGCCCATGCCAAACACGGGAGCAGAGATGGGAGCACCCAGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000506326.1
ENST00000513145.1
ENST00000514516.5
CDS CAA 90 bp GGACTGTCCCCGAGGAGTCTTCCAGTGTCCTCATGCTTCTTTGGCTaGCACACAGCTGCCTGGACAATGGCCGGTGGCACCTGGCCCCAG +
Preference number: 6 (lower is better)
Translates to: GLSPRSLPVSSCFFG*HTAAWTMAGGTWPQ
Trigger: CTGGGGCCAGGTGCCACCGGCCATTGTCCAGGCAGCTGTGTGCAAGCCAAAGAAGCATGAGGACACTGGAAGACTCCTCGGGGACAGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000502491.1
ENST00000504234.1
ENST00000505596.1
ENST00000506107.1
ENST00000510560.1
ENST00000511759.1
ENST00000512955.1
ENST00000513145.1
ENST00000514516.5
ENST00000515172.1
CDS CAA 90 bp GGGTGCTCTGTCTGCTGTAGTCAGCCGAGCAGGGGCGTCTGCTGTTaGTCGCTCACTAGAAGAGAGCCCTTGCCAGCCCTGGGTTCCTGC +
Preference number: 6 (lower is better)
Translates to: GCSVCCSQPSRGVCC*SLTRREPLPALGSC
Trigger: GCAGGAACCCAGGGCTGGCAAGGGCTCTCTTCTAGTGAGCGACAAACAGCAGACGCCCCTGCTCGGCTGACTACAGCAGACAGAGCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249883.10
ENST00000506326.1
CDS CAA 90 bp CGCTCTCTGAAGGCCGCCTTTCTAAGCCAGCGCGCGTCTCCAGCCTaGGCCTGGGCTCCTGCTCGCCTAAGGAACCAAAGACAGTCTCCA +
Preference number: 6 (lower is better)
Translates to: RSLKAAFLSQRASPA*AWAPARLRNQRQSP
Trigger: TGGAGACTGTCTTTGGTTCCTTAGGCGAGCAGGAGCCCAGGCCAAGGCTGGAGACGCGCGCTGGCTTAGAAAGGCGGCCTTCAGAGAGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515172.1
CDS CCA 72 bp GTGTCCTCATGCTTCTTTGGCTTGCACACAGCTGCCTaGACAATGGCCGGTGGCACCTGGCCCCAGAGCACC +
Preference number: 6 (lower is better)
Translates to: VSSCFFGLHTAA*TMAGGTWPQST
Trigger: GGTGCTCTGGGGCCAGGTGCCACCGGCCATTGTCCAGGCAGCTGTGTGCAAGCCAAAGAAGCATGAGGACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000502491.1
ENST00000504234.1
ENST00000505596.1
ENST00000506107.1
ENST00000510560.1
ENST00000511759.1
ENST00000512955.1
ENST00000513145.1
ENST00000514516.5
ENST00000515172.1
CDS CCA 72 bp TGGCCTCCTCATAGGTGGGCAGCTCCTCTCCCTTGCTaGGCTGTGGGCATAGCCGGTAGAGGGTGTTCTCTG +
Preference number: 6 (lower is better)
Translates to: WPPHRWAAPLPC*AVGIAGRGCSL
Trigger: CAGAGAACACCCTCTACCGGCTATGCCCACAGCCCAGCAAGGGAGAGGAGCTGCCCACCTATGAGGAGGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000504234.1
ENST00000505596.1
ENST00000506107.1
ENST00000510560.1
ENST00000513145.1
ENST00000514516.5
ENST00000515172.1
CDS CCA 72 bp CATGCTTCTTTGGCTTGCACACAGCTGCCTGGACAATaGCCGGTGGCACCTGGCCCCAGAGCACCAGGAACC +
Preference number: 6 (lower is better)
Translates to: HASLACTQLPGQ*PVAPGPRAPGT
Trigger: GGTTCCTGGTGCTCTGGGGCCAGGTGCCACCGGCCATTGTCCAGGCAGCTGTGTGCAAGCCAAAGAAGCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505596.1
CDS CCA 72 bp GCGCCCCTTTACGCAGAGTGCAAGGTGTGCCACCGCTaGCTTTTCGCCCAGTCATCCGATTCAGCCCTGCCA +
Preference number: 6 (lower is better)
Translates to: APLYAECKVCHR*LFAQSSDSALP
Trigger: TGGCAGGGCTGAATCGGATGACTGGGCGAAAAGCCAGCGGTGGCACACCTTGCACTCTGCGTAAAGGGGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514516.5
CDS CAA 90 bp TCACTGTCCATCTTGTTCCGCATGGTCTTCTCCAGGGCCTCACGCTaGGAGGAGGCTCTGGTCAGGCTCTCATGGGCCTCAGAGAGCCGC +
Preference number: 6 (lower is better)
Translates to: SLSILFRMVFSRASR*EEALVRLSWASESR
Trigger: GCGGCTCTCTGAGGCCCATGAGAGCCTGACCAGAGCCTCCTCCAAGCGTGAGGCCCTGGAGAAGACCATGCGGAACAAGATGGACAGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000506326.1
ENST00000513145.1
ENST00000514516.5
CDS CAA 90 bp TGTGGGTGCTCTGTCTGTAGTCAGCCGAGCAGGGGCGTCTGCTGTTaGTCGCTCACTAGAAGAGAGCCCTTGCCAGCCCTGGGTTCCTGC +
Preference number: 6 (lower is better)
Translates to: CGCSVCSQPSRGVCC*SLTRREPLPALGSC
Trigger: GCAGGAACCCAGGGCTGGCAAGGGCTCTCTTCTAGTGAGCGACAAACAGCAGACGCCCCTGCTCGGCTGACTACAGACAGAGCACCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS TCA 72 bp AGTGCGGGCTGCCGCGGGCACGGTACCGTGGGTCAGTaGCAGCAGTGGTGGTCTCATGAGCTAGTACAACAT +
Preference number: 6 (lower is better)
Translates to: SAGCRGHGTVGQ*QQWWSHELVQH
Trigger: ATGTTGTACTAGCTCATGAGACCACCACTGCTGTCACTGACCCACGGTACCGTGCCCGCGGCAGCCCGCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS GCA 72 bp TCCAGTGTCCTCATGCTTCTTTGGCTTGCACACAGCTaGCTGGACAATGGCCGGTGGCACCTGGCCCCAGAG +
Preference number: 6 (lower is better)
Translates to: SSVLMLLWLAHS*LDNGRWHLAPE
Trigger: CTCTGGGGCCAGGTGCCACCGGCCATTGTCCAGGCAGCTGTGTGCAAGCCAAAGAAGCATGAGGACACTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000502491.1
ENST00000504234.1
ENST00000505596.1
ENST00000506107.1
ENST00000510560.1
ENST00000511759.1
ENST00000512955.1
ENST00000513145.1
ENST00000514516.5
ENST00000515172.1
CDS GCA 72 bp CTCACTAGAAGAGAGCCCTTGCCAGCCCTGGGTTCCTaGTGCCGCAGCCGCGAAAACAGATGGCACCGACTT +
Preference number: 6 (lower is better)
Translates to: LTRREPLPALGS*CRSRENRWHRL
Trigger: AAGTCGGTGCCATCTGTTTTCGCGGCTGCGGCAGCAGGAACCCAGGGCTGGCAAGGGCTCTCTTCTAGTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000506326.1
ENST00000513145.1
ENST00000514516.5
CDS CCA 72 bp GCTCTGGTCAGGCTCTCATGGGCCTCAGAGAGCCGCTaGATTTCGCTTTCCAGCTTCTCAATGCGGCCAGCC +
Preference number: 6 (lower is better)
Translates to: ALVRLSWASESR*ISLSSFSMRPA
Trigger: GGCTGGCCGCATTGAGAAGCTGGAAAGCGAAATCCAGCGGCTCTCTGAGGCCCATGAGAGCCTGACCAGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS CAA 72 bp GTCTGCTGTAGTCAGCCGAGCAGGGGCGTCTGCTGTTaGTCGCTCACTAGAAGAGAGCCCTTGCCAGCCCTG +
Preference number: 6 (lower is better)
Translates to: VCCSQPSRGVCC*SLTRREPLPAL
Trigger: CAGGGCTGGCAAGGGCTCTCTTCTAGTGAGCGACAAACAGCAGACGCCCCTGCTCGGCTGACTACAGCAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249883.10
ENST00000506326.1
CDS GCA 72 bp GGGTGCTCTGTCTGTAGTCAGCCGAGCAGGGGCGTCTaGTGTTTGTCGCTCACTAGAAGAGAGCCCTTGCCA +
Preference number: 6 (lower is better)
Translates to: GCSVCSQPSRGV*CLSLTRREPLP
Trigger: TGGCAAGGGCTCTCTTCTAGTGAGCGACAAACAGCAGACGCCCCTGCTCGGCTGACTACAGACAGAGCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS CCA 72 bp CATGCTTCTTTGGCTTGCACACAGCTGCCTGGACAATaGCCGGTGGCACCTGGCCCCAGAGCACCTAATCTC +
Preference number: 6 (lower is better)
Translates to: HASLACTQLPGQ*PVAPGPRAPNL
Trigger: GAGATTAGGTGCTCTGGGGCCAGGTGCCACCGGCCATTGTCCAGGCAGCTGTGTGCAAGCCAAAGAAGCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502491.1
CDS CAA 72 bp CCGAGGAGTCTTCCAGTGTCCTCATGCTTCTTTGGCTaGCACACAGCTGCCTGGACAATGGCCGGTGGCACC +
Preference number: 6 (lower is better)
Translates to: PRSLPVSSCFFG*HTAAWTMAGGT
Trigger: GGTGCCACCGGCCATTGTCCAGGCAGCTGTGTGCAAGCCAAAGAAGCATGAGGACACTGGAAGACTCCTCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000502491.1
ENST00000504234.1
ENST00000505596.1
ENST00000506107.1
ENST00000510560.1
ENST00000511759.1
ENST00000512955.1
ENST00000513145.1
ENST00000514516.5
ENST00000515172.1
CDS CAA 72 bp ATCTTGTTCCGCATGGTCTTCTCCAGGGCCTCACGCTaGGAGGAGGCTCTGGTCAGGCTCTCATGGGCCTCA +
Preference number: 6 (lower is better)
Translates to: ILFRMVFSRASR*EEALVRLSWAS
Trigger: TGAGGCCCATGAGAGCCTGACCAGAGCCTCCTCCAAGCGTGAGGCCCTGGAGAAGACCATGCGGAACAAGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000506326.1
ENST00000513145.1
ENST00000514516.5
CDS CAA 72 bp TCTGTCTGTAGTCAGCCGAGCAGGGGCGTCTGCTGTTaGTCGCTCACTAGAAGAGAGCCCTTGCCAGCCCTG +
Preference number: 6 (lower is better)
Translates to: SVCSQPSRGVCC*SLTRREPLPAL
Trigger: CAGGGCTGGCAAGGGCTCTCTTCTAGTGAGCGACAAACAGCAGACGCCCCTGCTCGGCTGACTACAGACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422605.6
ENST00000513145.1
ENST00000514516.5
CDS CAA 72 bp GACTTACTATTCCTGCAACCCGAAACACTGTGGCTGTaGTCTCCGGAGTCGGCCCTCTCCCCTCTCCCCCAG +
Preference number: 6 (lower is better)
Translates to: DLLFLQPETLWL*SPESALSPLPQ
Trigger: CTGGGGGAGAGGGGAGAGGGCCGACTCCGGAGACAACAGCCACAGTGTTTCGGGTTGCAGGAATAGTAAGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502491.1
CDS GCA 72 bp TGCTCTGTCTGCTGTAGTCAGCCGAGCAGGGGCGTCTaGTGTTTGTCGCTCACTAGAAGAGAGCCCTTGCCA +
Preference number: 6 (lower is better)
Translates to: CSVCCSQPSRGV*CLSLTRREPLP
Trigger: TGGCAAGGGCTCTCTTCTAGTGAGCGACAAACAGCAGACGCCCCTGCTCGGCTGACTACAGCAGACAGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249883.10
ENST00000506326.1
CDS GCA 72 bp GTGAACCCAGGGCCAGGTACTTTGGAAGTAGCTGCCTaGGGGGTGACTAAACACAGCTTCCCTGTGCCCAGT +
Preference number: 6 (lower is better)
Translates to: VNPGPGTLEVAA*GVTKHSFPVPS
Trigger: ACTGGGCACAGGGAAGCTGTGTTTAGTCACCCCGCAGGCAGCTACTTCCAAAGTACCTGGCCCTGGGTTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506326.1
CDS GCA 72 bp GGTCAGAAGCTTGTAGCCTCCGGAAGTAGAATAGACTaGTGGGACCAGCAAGCAACGGTCCCATCGGCTGCC +
Preference number: 6 (lower is better)
Translates to: GQKLVASGSRID*WDQQATVPSAA
Trigger: GGCAGCCGATGGGACCGTTGCTTGCTGGTCCCAGCAGTCTATTCTACTTCCGGAGGCTACAAGCTTCTGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506326.1
CDS CCA 72 bp CAGAAGCTTGTAGCCTCCGGAAGTAGAATAGACTGCTaGGACCAGCAAGCAACGGTCCCATCGGCTGCCCCA +
Preference number: 6 (lower is better)
Translates to: QKLVASGSRIDC*DQQATVPSAAP
Trigger: TGGGGCAGCCGATGGGACCGTTGCTTGCTGGTCCCAGCAGTCTATTCTACTTCCGGAGGCTACAAGCTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506326.1
CDS CCA 72 bp GCTCTGGTCAGGCTCTCATGGGCCTCAGAGAGCCGCTaGATTTCGCTTTCCAGCTGCAAGAGTCAGACAGCA +
Preference number: 6 (lower is better)
Translates to: ALVRLSWASESR*ISLSSCKSQTA
Trigger: TGCTGTCTGACTCTTGCAGCTGGAAAGCGAAATCCAGCGGCTCTCTGAGGCCCATGAGAGCCTGACCAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506326.1
CDS TCA 72 bp GCTTTCCAGCTGCAAGAGTCAGACAGCAGAGCTGAATaGAGGCGAGAGCTCCCAGGGAGTGATTCGAGGCTG +
Preference number: 6 (lower is better)
Translates to: AFQLQESDSRAE*RRELPGSDSRL
Trigger: CAGCCTCGAATCACTCCCTGGGAGCTCTCGCCTTCATTCAGCTCTGCTGTCTGACTCTTGCAGCTGGAAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506326.1
CDS GCA 72 bp GCAGGACTGTCCCCGAGGAGTCTTCCAGTGTCCTCATaGTTCTTTGGCTTGCACACAGCTGCCTGGACAATG +
Preference number: 6 (lower is better)
Translates to: AGLSPRSLPVSS*FFGLHTAAWTM
Trigger: CATTGTCCAGGCAGCTGTGTGCAAGCCAAAGAAGCATGAGGACACTGGAAGACTCCTCGGGGACAGTCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000249883.10
ENST00000422605.6
ENST00000502491.1
ENST00000504234.1
ENST00000505596.1
ENST00000506107.1
ENST00000510560.1
ENST00000511759.1
ENST00000512955.1
ENST00000513145.1
ENST00000514516.5
ENST00000515172.1
CDS GCA 72 bp TGGGCCTCAGAGAGCCGCTGGATTTCGCTTTCCAGCTaGAAGAGTCAGACAGCAGAGCTGAATGAAGGCGAG +
Preference number: 6 (lower is better)
Translates to: WASESRWISLSS*KSQTAELNEGE
Trigger: CTCGCCTTCATTCAGCTCTGCTGTCTGACTCTTGCAGCTGGAAAGCGAAATCCAGCGGCTCTCTGAGGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506326.1
CDS CAA 90 bp AGATCCCGGTTGAAGTCTTGCAGCCTCCTCATTTCACTGTCCATCTaGTTCCGCATGGTCTTCTCCAGGGCCTCACGCTTGGAGGAGGCT +
Preference number: 6 (lower is better)
Translates to: RSRLKSCSLLISLSI*FRMVFSRASRLEEA
Trigger: AGCCTCCTCCAAGCGTGAGGCCCTGGAGAAGACCATGCGGAACAAGATGGACAGTGAAATGAGGAGGCTGCAAGACTTCAACCGGGATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST0000024988