RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AMOTL1 (Homo sapiens)

Ensembl gene IDs: ENSG00000166025

Ensembl transcript IDs: ENST00000299004.13, ENST00000317829.12, ENST00000433060.3, ENST00000537191.1, ENST00000539727.1

Found 984 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGAGCAACCCCAGAGGACTGCACCCAGAAGGGCTCCACCACTGCCTaGTCTCCCAACGAAAGCCTGAGGAGGGCCAAGGCAGCCCCTGCC +
Preference number: 1 (lower is better)
Translates to: RATPEDCTQKGSTTA*SPNESLRRAKAAPA
Trigger: GGCAGGGGCTGCCTTGGCCCTCCTCAGGCTTTCGTTGGGAGAGCAGGCAGTGGTGGAGCCCTTCTGGGTGCAGTCCTCTGGGGTTGCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR GCA 90 bp CCAAAGAGCAACCCCAGAGGACTGCACCCAGAAGGGCTCCACCACTaGCTGCTCTCCCAACGAAAGCCTGAGGAGGGCCAAGGCAGCCCC +
Preference number: 1 (lower is better)
Translates to: PKSNPRGLHPEGLHH*LLSQRKPEEGQGSP
Trigger: GGGGCTGCCTTGGCCCTCCTCAGGCTTTCGTTGGGAGAGCAGGCAGTGGTGGAGCCCTTCTGGGTGCAGTCCTCTGGGGTTGCTCTTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR TCA 90 bp GAGGGCCAAGGCAGCCCCTGCCCTGCGTGCATGGTTAGAACATGCTaGACTCTGCAGTGTCACTGGCTGCCAGCCTCTGGGAGGCAGAGA +
Preference number: 1 (lower is better)
Translates to: EGQGSPCPACMVRTC*TLQCHWLPASGRQR
Trigger: TCTCTGCCTCCCAGAGGCTGGCAGCCAGTGACACTGCAGAGTTCAGCATGTTCTAACCATGCACGCAGGGCAGGGGCTGCCTTGGCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR CCA 90 bp GCCAAGCAGAGCCCCAGAGGGCCAGTTCCCACTCCTCTGTCGTACTaGGTGGCACAGAGGCTGGCCAAAGCCACTGATTTCTTCCCTTCC +
Preference number: 1 (lower is better)
Translates to: AKQSPRGPVPTPLSY*VAQRLAKATDFFPS
Trigger: GGAAGGGAAGAAATCAGTGGCTTTGGCCAGCCTCTGTGCCACCCAGTACGACAGAGGAGTGGGAACTGGCCCTCTGGGGCTCTGCTTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR TCA 90 bp GAAGTTCACAACAGAGGCAACCTGGTGCCACGGAGGTCTGGATGCTaGTCGAGAGCAAGCAGAGGCGTGCGCGGGGGAGGAAAGAGTGTG +
Preference number: 1 (lower is better)
Translates to: EVHNRGNLVPRRSGC*SRASRGVRGGGKSV
Trigger: CACACTCTTTCCTCCCCCGCGCACGCCTCTGCTTGCTCTCGATCAGCATCCAGACCTCCGTGGCACCAGGTTGCCTCTGTTGTGAACTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR CCA 90 bp AGCAGAGCCCCAGAGGGCCAGTTCCCACTCCTCTGTCGTACTGGGTaGCACAGAGGCTGGCCAAAGCCACTGATTTCTTCCCTTCCCTCT +
Preference number: 1 (lower is better)
Translates to: SRAPEGQFPLLCRTG*HRGWPKPLISSLPS
Trigger: AGAGGGAAGGGAAGAAATCAGTGGCTTTGGCCAGCCTCTGTGCCACCCAGTACGACAGAGGAGTGGGAACTGGCCCTCTGGGGCTCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR CCA 90 bp AACGAAAGCCTGAGGAGGGCCAAGGCAGCCCCTGCCCTGCGTGCATaGTTAGAACATGCTGAACTCTGCAGTGTCACTGGCTGCCAGCCT +
Preference number: 1 (lower is better)
Translates to: NESLRRAKAAPALRA*LEHAELCSVTGCQP
Trigger: AGGCTGGCAGCCAGTGACACTGCAGAGTTCAGCATGTTCTAACCATGCACGCAGGGCAGGGGCTGCCTTGGCCCTCCTCAGGCTTTCGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR GCA 90 bp AGTGTGAGACTAGAGGAGGTGATGAGCAGGTGGCACAATGTGCAGTaGCTATGGCCAAGCAGAGCCCCAGAGGGCCAGTTCCCACTCCTC +
Preference number: 1 (lower is better)
Translates to: SVRLEEVMSRWHNVQ*LWPSRAPEGQFPLL
Trigger: GAGGAGTGGGAACTGGCCCTCTGGGGCTCTGCTTGGCCATAGGCACTGCACATTGTGCCACCTGCTCATCACCTCCTCTAGTCTCACACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR CCA 90 bp GAGGGCCAGTTCCCACTCCTCTGTCGTACTGGGTGGCACAGAGGCTaGCCAAAGCCACTGATTTCTTCCCTTCCCTCTCCAGCTTACACC +
Preference number: 1 (lower is better)
Translates to: EGQFPLLCRTGWHRG*PKPLISSLPSPAYT
Trigger: GGTGTAAGCTGGAGAGGGAAGGGAAGAAATCAGTGGCTTTGGCCAGCCTCTGTGCCACCCAGTACGACAGAGGAGTGGGAACTGGCCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR GCA 90 bp AAGGCAGCCCCTGCCCTGCGTGCATGGTTAGAACATGCTGAACTCTaGAGTGTCACTGGCTGCCAGCCTCTGGGAGGCAGAGAAAATGCT +
Preference number: 1 (lower is better)
Translates to: KAAPALRAWLEHAEL*SVTGCQPLGGRENA
Trigger: AGCATTTTCTCTGCCTCCCAGAGGCTGGCAGCCAGTGACACTGCAGAGTTCAGCATGTTCTAACCATGCACGCAGGGCAGGGGCTGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR GCA 90 bp GACTGGCAATATGAAGACGTCAAACGTTACAGCCAGATACCAGTCTaGTGGGAAGAGCCGGCACGAGCACGGCACACTGCCACCAAGCAC +
Preference number: 1 (lower is better)
Translates to: DWQYEDVKRYSQIPV*WEEPARARHTATKH
Trigger: GTGCTTGGTGGCAGTGTGCCGTGCTCGTGCCGGCTCTTCCCAGCAGACTGGTATCTGGCTGTAACGTTTGACGTCTTCATATTGCCAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR CCA 90 bp TGGCAATATGAAGACGTCAAACGTTACAGCCAGATACCAGTCTGCTaGGAAGAGCCGGCACGAGCACGGCACACTGCCACCAAGCACAGC +
Preference number: 1 (lower is better)
Translates to: WQYEDVKRYSQIPVC*EEPARARHTATKHS
Trigger: GCTGTGCTTGGTGGCAGTGTGCCGTGCTCGTGCCGGCTCTTCCCAGCAGACTGGTATCTGGCTGTAACGTTTGACGTCTTCATATTGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR TCA 90 bp CACTGCCACACTCACACTCACGGGACACCCCATGGTTGGCACAGGTaGCACTGCATTATGCCAAGACAGGCTCTCAAGATTTCCTGGAGG +
Preference number: 1 (lower is better)
Translates to: HCHTHTHGTPHGWHR*HCIMPRQALKISWR
Trigger: CCTCCAGGAAATCTTGAGAGCCTGTCTTGGCATAATGCAGTGTCACCTGTGCCAACCATGGGGTGTCCCGTGAGTGTGAGTGTGGCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR TCA 90 bp CACAGTCAGAATGAGGTTCGCAGCTGCAACCCAGCTATGCAAAGGTaGAGCAGCCAGGAAGTCGGCACGTGGCTTTGTCCTACTGGTCAC +
Preference number: 1 (lower is better)
Translates to: HSQNEVRSCNPAMQR*SSQEVGTWLCPTGH
Trigger: GTGACCAGTAGGACAAAGCCACGTGCCGACTTCCTGGCTGCTTCACCTTTGCATAGCTGGGTTGCAGCTGCGAACCTCATTCTGACTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR GCA 90 bp TGGCCTGGTAGGTTACAAAAGAAGTTCACAACAGAGGCAACCTGGTaGCACGGAGGTCTGGATGCTGATCGAGAGCAAGCAGAGGCGTGC +
Preference number: 1 (lower is better)
Translates to: WPGRLQKKFTTEATW*HGGLDADREQAEAC
Trigger: GCACGCCTCTGCTTGCTCTCGATCAGCATCCAGACCTCCGTGGCACCAGGTTGCCTCTGTTGTGAACTTCTTTTGTAACCTACCAGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR GCA 90 bp TGCACACACACATCACAGACAGGCATAGAGACTGCCAAGATGCAGTaGCGCATGTTAGAGGCTGTACAGCCAGGGTCTATGCCCAGTGCC +
Preference number: 1 (lower is better)
Translates to: CTHTSQTGIETAKMQ*RMLEAVQPGSMPSA
Trigger: GGCACTGGGCATAGACCCTGGCTGTACAGCCTCTAACATGCGGCACTGCATCTTGGCAGTCTCTATGCCTGTCTGTGATGTGTGTGTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR GCA 90 bp GGAGTCAAACTCATACATGAGTTCCAAAGAGCAACCCCAGAGGACTaGACCCAGAAGGGCTCCACCACTGCCTGCTCTCCCAACGAAAGC +
Preference number: 1 (lower is better)
Translates to: GVKLIHEFQRATPED*TQKGSTTACSPNES
Trigger: GCTTTCGTTGGGAGAGCAGGCAGTGGTGGAGCCCTTCTGGGTGCAGTCCTCTGGGGTTGCTCTTTGGAACTCATGTATGAGTTTGACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR TCA 90 bp CAAGCAAGTCTGACACCTGATTGGGGCAATCAGGTGTCTGGGGCATaGAGACGAGGCTTCGGGAGAAACAGCTGGGTCTCTCACTCTAAC +
Preference number: 1 (lower is better)
Translates to: QASLTPDWGNQVSGA*RRGFGRNSWVSHSN
Trigger: GTTAGAGTGAGAGACCCAGCTGTTTCTCCCGAAGCCTCGTCTTCATGCCCCAGACACCTGATTGCCCCAATCAGGTGTCAGACTTGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR CCA 90 bp AACTGGCCTGGTAGGTTACAAAAGAAGTTCACAACAGAGGCAACCTaGTGCCACGGAGGTCTGGATGCTGATCGAGAGCAAGCAGAGGCG +
Preference number: 1 (lower is better)
Translates to: NWPGRLQKKFTTEAT*CHGGLDADREQAEA
Trigger: CGCCTCTGCTTGCTCTCGATCAGCATCCAGACCTCCGTGGCACCAGGTTGCCTCTGTTGTGAACTTCTTTTGTAACCTACCAGGCCAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR CCA 90 bp TGGGTCTCTCACTCTAACCTATGTCTAAGGGAGGCAGCCCAAGTTTaGGGTGGCCCAGACCTGATGGTAGGGGCTGGCAGAGTTGATTTA +
Preference number: 1 (lower is better)
Translates to: WVSHSNLCLREAAQV*GGPDLMVGAGRVDL
Trigger: TAAATCAACTCTGCCAGCCCCTACCATCAGGTCTGGGCCACCCCAAACTTGGGCTGCCTCCCTTAGACATAGGTTAGAGTGAGAGACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR TCA 90 bp ATATCCTGGCAGCACACAGAAACTGCCAGACAACGCAGTCAAGGGTaGAGCAGAACAATGCTGGAATACCTTCCCGTGAAGCCAGGGCCT +
Preference number: 1 (lower is better)
Translates to: ISWQHTETARQRSQG*SRTMLEYLPVKPGP
Trigger: AGGCCCTGGCTTCACGGGAAGGTATTCCAGCATTGTTCTGCTTCACCCTTGACTGCGTTGTCTGGCAGTTTCTGTGTGCTGCCAGGATAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR TCA 90 bp CACACACACACAGAGCAGGTTGGAGGGCAGCGGCAGCAGGACAGCTaGAATCGGGTGCCCATGCTTACCACTGTTTCACAGAATTTTACA +
Preference number: 1 (lower is better)
Translates to: HTHTEQVGGQRQQDS*NRVPMLTTVSQNFT
Trigger: TGTAAAATTCTGTGAAACAGTGGTAAGCATGGGCACCCGATTTCAGCTGTCCTGCTGCCGCTGCCCTCCAACCTGCTCTGTGTGTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR TCA 90 bp CGGAATCTCCTGCCTCCTCAAAGCTTGCTTAGTTCACAGTCAGAATaGGGTTCGCAGCTGCAACCCAGCTATGCAAAGGTGAAGCAGCCA +
Preference number: 1 (lower is better)
Translates to: RNLLPPQSLLSSQSE*GSQLQPSYAKVKQP
Trigger: TGGCTGCTTCACCTTTGCATAGCTGGGTTGCAGCTGCGAACCTCATTCTGACTGTGAACTAAGCAAGCTTTGAGGAGGCAGGAGATTCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR CCA 90 bp CCCTCTCCAGCTTACACCTCTTGTCTTCCTTCTGTCACCTCAATTTaGGGAGGCTATAACTTCACCGGGGTTACACACCCAAGACCAGTC +
Preference number: 1 (lower is better)
Translates to: PSPAYTSCLPSVTSI*GGYNFTGVTHPRPV
Trigger: GACTGGTCTTGGGTGTGTAACCCCGGTGAAGTTATAGCCTCCCCAAATTGAGGTGACAGAAGGAAGACAAGAGGTGTAAGCTGGAGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR CCA 90 bp CCTCACCTGAAGTCTGTGTCCCTAAGTCTCTGGGACTCAGGTCAATaGGGAGGAAGAATTTCCCATTCTCTCAGCACCTGGCATGAAGGT +
Preference number: 1 (lower is better)
Translates to: PHLKSVSLSLWDSGQ*GGRISHSLSTWHEG
Trigger: ACCTTCATGCCAGGTGCTGAGAGAATGGGAAATTCTTCCTCCCCATTGACCTGAGTCCCAGAGACTTAGGGACACAGACTTCAGGTGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR TCA 90 bp CTGTTTTGGTATCCATGCCAAGCCTTGTGGAGTCAAACTCATACATaGGTTCCAAAGAGCAACCCCAGAGGACTGCACCCAGAAGGGCTC +
Preference number: 1 (lower is better)
Translates to: LFWYPCQALWSQTHT*VPKSNPRGLHPEGL
Trigger: GAGCCCTTCTGGGTGCAGTCCTCTGGGGTTGCTCTTTGGAACTCATGTATGAGTTTGACTCCACAAGGCTTGGCATGGATACCAAAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR GCA 90 bp CAGAGCAGGTTGGAGGGCAGCGGCAGCAGGACAGCTGAAATCGGGTaGCCATGCTTACCACTGTTTCACAGAATTTTACACAATTCTGTA +
Preference number: 1 (lower is better)
Translates to: QSRLEGSGSRTAEIG*PCLPLFHRILHNSV
Trigger: TACAGAATTGTGTAAAATTCTGTGAAACAGTGGTAAGCATGGGCACCCGATTTCAGCTGTCCTGCTGCCGCTGCCCTCCAACCTGCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR GCA 90 bp GCCACGATCTTAATGCAATATGTCACAGGGACCCACGGAATCTCCTaGCTCCTCAAAGCTTGCTTAGTTCACAGTCAGAATGAGGTTCGC +
Preference number: 1 (lower is better)
Translates to: ATILMQYVTGTHGIS*LLKACLVHSQNEVR
Trigger: GCGAACCTCATTCTGACTGTGAACTAAGCAAGCTTTGAGGAGGCAGGAGATTCCGTGGGTCCCTGTGACATATTGCATTAAGATCGTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR GCA 90 bp AGGTTGGAGGGCAGCGGCAGCAGGACAGCTGAAATCGGGTGCCCATaGTTACCACTGTTTCACAGAATTTTACACAATTCTGTAAGTGCT +
Preference number: 1 (lower is better)
Translates to: RLEGSGSRTAEIGCP*LPLFHRILHNSVSA
Trigger: AGCACTTACAGAATTGTGTAAAATTCTGTGAAACAGTGGTAAGCATGGGCACCCGATTTCAGCTGTCCTGCTGCCGCTGCCCTCCAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR CCA 90 bp GCAAAGGTGAAGCAGCCAGGAAGTCGGCACGTGGCTTTGTCCTACTaGTCACTATCAAACACAGTAGGAATGATGACAGTTCAGGTACTG +
Preference number: 1 (lower is better)
Translates to: AKVKQPGSRHVALSY*SLSNTVGMMTVQVL
Trigger: CAGTACCTGAACTGTCATCATTCCTACTGTGTTTGATAGTGACCAGTAGGACAAAGCCACGTGCCGACTTCCTGGCTGCTTCACCTTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR CCA 90 bp ACAGGCAGTGTTCTTGGAATCCCCACACTGGTACACAGACCCATTTaGCTGTATGGCCATGTACATCACCCCTCAATACAGACTGGCAAT +
Preference number: 1 (lower is better)
Translates to: TGSVLGIPTLVHRPI*LYGHVHHPSIQTGN
Trigger: ATTGCCAGTCTGTATTGAGGGGTGATGTACATGGCCATACAGCCAAATGGGTCTGTGTACCAGTGTGGGGATTCCAAGAACACTGCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR TCA 90 bp GACCTGGAGGTACAAAAACATCAGGACCCTGTAGGAGCATCTCTCTaGTGGCCCGATGAGCTTCTCCTCTTTTCTAATCCAGCATCTCTT +
Preference number: 1 (lower is better)
Translates to: DLEVQKHQDPVGASL*WPDELLLFSNPASL
Trigger: AAGAGATGCTGGATTAGAAAAGAGGAGAAGCTCATCGGGCCATCAGAGAGATGCTCCTACAGGGTCCTGATGTTTTTGTACCTCCAGGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR TCA 90 bp GGCTGTATGGCCATGTACATCACCCCTCAATACAGACTGGCAATATaGAGACGTCAAACGTTACAGCCAGATACCAGTCTGCTGGGAAGA +
Preference number: 1 (lower is better)
Translates to: GCMAMYITPQYRLAI*RRQTLQPDTSLLGR
Trigger: TCTTCCCAGCAGACTGGTATCTGGCTGTAACGTTTGACGTCTTCATATTGCCAGTCTGTATTGAGGGGTGATGTACATGGCCATACAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR CCA 90 bp ACCCATTTGGCTGTATGGCCATGTACATCACCCCTCAATACAGACTaGCAATATGAAGACGTCAAACGTTACAGCCAGATACCAGTCTGC +
Preference number: 1 (lower is better)
Translates to: THLAVWPCTSPLNTD*QYEDVKRYSQIPVC
Trigger: GCAGACTGGTATCTGGCTGTAACGTTTGACGTCTTCATATTGCCAGTCTGTATTGAGGGGTGATGTACATGGCCATACAGCCAAATGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR CCA 90 bp TGTTCTTGGAATCCCCACACTGGTACACAGACCCATTTGGCTGTATaGCCATGTACATCACCCCTCAATACAGACTGGCAATATGAAGAC +
Preference number: 1 (lower is better)
Translates to: CSWNPHTGTQTHLAV*PCTSPLNTDWQYED
Trigger: GTCTTCATATTGCCAGTCTGTATTGAGGGGTGATGTACATGGCCATACAGCCAAATGGGTCTGTGTACCAGTGTGGGGATTCCAAGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR GCA 90 bp CCAACTTCTCCAGTTCCATATAATATCCTGGCAGCACACAGAAACTaGCAGACAACGCAGTCAAGGGTGAAGCAGAACAATGCTGGAATA +
Preference number: 1 (lower is better)
Translates to: PTSPVPYNILAAHRN*QTTQSRVKQNNAGI
Trigger: TATTCCAGCATTGTTCTGCTTCACCCTTGACTGCGTTGTCTGGCAGTTTCTGTGTGCTGCCAGGATATTATATGGAACTGGAGAAGTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR GCA 90 bp TTGCTTAAGAGGAGTGCAAGATCATTCAGAGAACACAGAGAAGCATaGTCCACTTACTCCAGCGTGGACACTGGTTTTGAACCCTGGTTT +
Preference number: 1 (lower is better)
Translates to: LLKRSARSFREHREA*STYSSVDTGFEPWF
Trigger: AAACCAGGGTTCAAAACCAGTGTCCACGCTGGAGTAAGTGGAGCATGCTTCTCTGTGTTCTCTGAATGATCTTGCACTCCTCTTAAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR CCA 90 bp TCTGTTTCCTGGAGTGCTGTCCTAAGTCTTCCCCAAACAGAGCAATaGAATTTGGAAATGTCAAGCTCCTTGCAAGACAGCCGATGTGAA +
Preference number: 1 (lower is better)
Translates to: SVSWSAVLSLPQTEQ*NLEMSSSLQDSRCE
Trigger: TTCACATCGGCTGTCTTGCAAGGAGCTTGACATTTCCAAATTCCATTGCTCTGTTTGGGGAAGACTTAGGACAGCACTCCAGGAAACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR CCA 90 bp CTAAGAGGCAAGGAGAATGGGGGTATTCCAAGGATGATCCACATTTaGGTTTATCTGTTTATAATCAGAGAATGGGGGTACACAGGCCCT +
Preference number: 1 (lower is better)
Translates to: LRGKENGGIPRMIHI*VYLFIIREWGYTGP
Trigger: AGGGCCTGTGTACCCCCATTCTCTGATTATAAACAGATAAACCCAAATGTGGATCATCCTTGGAATACCCCCATTCTCCTTGCCTCTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR TCA 90 bp GCCTCTCCAAACTTTGTTTTAAATCATCCTAGCTTCTCCTGGCTGTaGGATTTCAGGAAGGGACTTAACCTTTCTGAGCCCATTTCCTCA +
Preference number: 1 (lower is better)
Translates to: ASPNFVLNHPSFSWL*DFRKGLNLSEPISS
Trigger: TGAGGAAATGGGCTCAGAAAGGTTAAGTCCCTTCCTGAAATCTCACAGCCAGGAGAAGCTAGGATGATTTAAAACAAAGTTTGGAGAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR CCA 90 bp CTGGAAACCACTGAGACAACTGTCTGTAAATTGTCATCTGTTTCCTaGAGTGCTGTCCTAAGTCTTCCCCAAACAGAGCAATGGAATTTG +
Preference number: 1 (lower is better)
Translates to: LETTETTVCKLSSVS*SAVLSLPQTEQWNL
Trigger: CAAATTCCATTGCTCTGTTTGGGGAAGACTTAGGACAGCACTCCAGGAAACAGATGACAATTTACAGACAGTTGTCTCAGTGGTTTCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR CCA 90 bp CATGAGCCTCAATACAAGAAGCTATACGGGAGGCTGGTGAGATTCTaGAAACCACTGAGACAACTGTCTGTAAATTGTCATCTGTTTCCT +
Preference number: 1 (lower is better)
Translates to: HEPQYKKLYGRLVRF*KPLRQLSVNCHLFP
Trigger: AGGAAACAGATGACAATTTACAGACAGTTGTCTCAGTGGTTTCCAGAATCTCACCAGCCTCCCGTATAGCTTCTTGTATTGAGGCTCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR CCA 90 bp CTTCATCCTGAGATAGGACCCTCAAGTTCTATAATCAGGCTCCACTaGGAAAGTTTGAAGTCCAGGTCTCTGGGAAGTGCAGAAATATTT +
Preference number: 1 (lower is better)
Translates to: LHPEIGPSSSIIRLH*ESLKSRSLGSAEIF
Trigger: AAATATTTCTGCACTTCCCAGAGACCTGGACTTCAAACTTTCCCAGTGGAGCCTGATTATAGAACTTGAGGGTCCTATCTCAGGATGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR TCA 90 bp AATGTCCTTAAGAGAGTTAGCTGTCATCTCCTAACTCATCTCCTATaGAATGTGGTGGGAACAGAGATTAGGAAGGGATGTCTATGCCCT +
Preference number: 1 (lower is better)
Translates to: NVLKRVSCHLLTHLL*NVVGTEIRKGCLCP
Trigger: AGGGCATAGACATCCCTTCCTAATCTCTGTTCCCACCACATTTCATAGGAGATGAGTTAGGAGATGACAGCTAACTCTCTTAAGGACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR TCA 90 bp CATGTACAGAGGCATCTAATTAGTGAAACTCTAGCTTCAGAGACCTaGCTCCAACTTCTCCAGTTCCATATAATATCCTGGCAGCACACA +
Preference number: 1 (lower is better)
Translates to: HVQRHLISETLASET*LQLLQFHIISWQHT
Trigger: TGTGTGCTGCCAGGATATTATATGGAACTGGAGAAGTTGGAGTCAGGTCTCTGAAGCTAGAGTTTCACTAATTAGATGCCTCTGTACATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR GCA 90 bp TTTTCTAATCCAGCATCTCTTAGATTTGTAAAGGAAGCCAGTGTCTaGAGAGCTGAATATGCAATGTCACAGCAGAGGTCTAATGGACCC +
Preference number: 1 (lower is better)
Translates to: FSNPASLRFVKEASV*RAEYAMSQQRSNGP
Trigger: GGGTCCATTAGACCTCTGCTGTGACATTGCATATTCAGCTCTGCAGACACTGGCTTCCTTTACAAATCTAAGAGATGCTGGATTAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR GCA 90 bp TTCCTGATTTCCCATCTACAACCTTCTAGGTCTTTCTTCTTTCTCTaGCGCTTTCCTTGTTTGTCAGTGTTCTGTACTGAAATTCCACAG +
Preference number: 1 (lower is better)
Translates to: FLISHLQPSRSFFFL*RFPCLSVFCTEIPQ
Trigger: CTGTGGAATTTCAGTACAGAACACTGACAAACAAGGAAAGCGGCAGAGAAAGAAGAAAGACCTAGAAGGTTGTAGATGGGAAATCAGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR CCA 90 bp GACTTCAGGAAAGCTCTAATGATGAAAGAATTTAGTGCCCTGGCTTaGCAGGAAATTTCCCATAGAAGAAGACATTTTAAAGCTATAGAT +
Preference number: 1 (lower is better)
Translates to: DFRKALMMKEFSALA*QEISHRRRHFKAID
Trigger: ATCTATAGCTTTAAAATGTCTTCTTCTATGGGAAATTTCCTGCCAAGCCAGGGCACTAAATTCTTTCATCATTAGAGCTTTCCTGAAGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR GCA 90 bp CCAAGCAGAGCCCCAGAGGGCCAGTTCCCACTCCTCTGTCGTACTGGGTGGCACTCCCCTCGCCCTCGATaGTTCTTCTCACTGCCACAC +
Preference number: 2 (lower is better)
Translates to: PSRAPEGQFPLLCRTGWHSPRPR*FFSLPH
Trigger: GTGTGGCAGTGAGAAGAAGCATCGAGGGCGAGGGGA...GTGCCACCCAGTACGACAGAGGAGTGGGAACTGGCCCTCTGGGGCTCTGCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR CCA 90 bp CCAAGCAGAGCCCCAGAGGGCCAGTTCCCACTCCTCTGTCGTACTGGGTGGCACGGTGCCACGGAGGTCTaGATGCTGATCGAGAGCAAG +
Preference number: 2 (lower is better)
Translates to: PSRAPEGQFPLLCRTGWHGATEV*MLIESK
Trigger: CTTGCTCTCGATCAGCATCCAGACCTCCGTGGCACC...GTGCCACCCAGTACGACAGAGGAGTGGGAACTGGCCCTCTGGGGCTCTGCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR GCA 90 bp CAAACGTTACAGCCAGATACCAGTCTGCTGGGAAGAGCCGGCACGAGCACGGCAGGCCAAGGCAGCCCCTaGCCTGCGTGCATGGTTAGA +
Preference number: 2 (lower is better)
Translates to: QTLQPDTSLLGRAGTSTAGQGSP*PACMVR
Trigger: TCTAACCATGCACGCAGGGCAGGGGCTGCCTTGGCC...TGCCGTGCTCGTGCCGGCTCTTCCCAGCAGACTGGTATCTGGCTGTAACGTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR TCA 90 bp CAAACGTTACAGCCAGATACCAGTCTGCTGGGAAGAGCCGGCACGAGCACGGCACAGGTGTCTGGGGCATaGAGACGAGGCTTCGGGAGA +
Preference number: 2 (lower is better)
Translates to: QTLQPDTSLLGRAGTSTAQVSGA*RRGFGR
Trigger: TCTCCCGAAGCCTCGTCTTCATGCCCCAGACACCTG...TGCCGTGCTCGTGCCGGCTCTTCCCAGCAGACTGGTATCTGGCTGTAACGTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR GCA 90 bp ACTGCCAAGATGCAGTGCCGCATGTTAGAGGCTGTACAGCCAGGGTCTATGCCCGAGCAAGCAGAGGCGTaGGCGGGGGAGGAAAGAGTG +
Preference number: 2 (lower is better)
Translates to: TAKMQCRMLEAVQPGSMPEQAEA*AGEERV
Trigger: CACTCTTTCCTCCCCCGCGCACGCCTCTGCTTGCTC...GGGCATAGACCCTGGCTGTACAGCCTCTAACATGCGGCACTGCATCTTGGCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR GCA 90 bp CAAACGTTACAGCCAGATACCAGTCTGCTGGGAAGAGCCGGCACGAGCACGGCATCCCCTCGCCCTCGATaGTTCTTCTCACTGCCACAC +
Preference number: 2 (lower is better)
Translates to: QTLQPDTSLLGRAGTSTASPRPR*FFSLPH
Trigger: GTGTGGCAGTGAGAAGAAGCATCGAGGGCGAGGGGA...TGCCGTGCTCGTGCCGGCTCTTCCCAGCAGACTGGTATCTGGCTGTAACGTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR GCA 90 bp AGAGCCGGCACGAGCACGGCACACTGCCACCAAGCACAGCGACACACACACACAGAACATGCTGAACTCTaGAGTGTCACTGGCTGCCAG +
Preference number: 2 (lower is better)
Translates to: RAGTSTAHCHQAQRHTHTEHAEL*SVTGCQ
Trigger: CTGGCAGCCAGTGACACTGCAGAGTTCAGCATGTTC...TGTGTGTGTGTGTCGCTGTGCTTGGTGGCAGTGTGCCGTGCTCGTGCCGGCTCT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR CCA 90 bp ACTGCCAAGATGCAGTGCCGCATGTTAGAGGCTGTACAGCCAGGGTCTATGCCCACTCCTCTGTCGTACTaGGTGGCACAGAGGCTGGCC +
Preference number: 2 (lower is better)
Translates to: TAKMQCRMLEAVQPGSMPTPLSY*VAQRLA
Trigger: GGCCAGCCTCTGTGCCACCCAGTACGACAGAGGAGT...GGGCATAGACCCTGGCTGTACAGCCTCTAACATGCGGCACTGCATCTTGGCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR CCA 90 bp CAAACGTTACAGCCAGATACCAGTCTGCTGGGAAGAGCCGGCACGAGCACGGCACTGGCTGCCAGCCTCTaGGAGGCAGAGAAAATGCTG +
Preference number: 2 (lower is better)
Translates to: QTLQPDTSLLGRAGTSTALAASL*EAEKML
Trigger: CAGCATTTTCTCTGCCTCCCAGAGGCTGGCAGCCAG...TGCCGTGCTCGTGCCGGCTCTTCCCAGCAGACTGGTATCTGGCTGTAACGTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR TCA 90 bp ACTGCCAAGATGCAGTGCCGCATGTTAGAGGCTGTACAGCCAGGGTCTATGCCCCCAGCTATGCAAAGGTaGAGCAGCCAGGAAGTCGGC +
Preference number: 2 (lower is better)
Translates to: TAKMQCRMLEAVQPGSMPPAMQR*SSQEVG
Trigger: GCCGACTTCCTGGCTGCTTCACCTTTGCATAGCTGG...GGGCATAGACCCTGGCTGTACAGCCTCTAACATGCGGCACTGCATCTTGGCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR GCA 90 bp CGTGAAGCCAGGGCCTCTCCCCTTCATCCTGAGATAGGACCCTCAAGTTCTATAGAGCAAGCAGAGGCGTaGGCGGGGGAGGAAAGAGTG +
Preference number: 2 (lower is better)
Translates to: REARASPLHPEIGPSSSIEQAEA*AGEERV
Trigger: CACTCTTTCCTCCCCCGCGCACGCCTCTGCTTGCTC...TATAGAACTTGAGGGTCCTATCTCAGGATGAAGGGGAGAGGCCCTGGCTTCACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR CCA 90 bp AGAGCCGGCACGAGCACGGCACACTGCCACCAAGCACAGCGACACACACACACAGCGATCCAGCTGACCTaGAGGTACAAAAACATCAGG +
Preference number: 2 (lower is better)
Translates to: RAGTSTAHCHQAQRHTHTAIQLT*RYKNIR
Trigger: CCTGATGTTTTTGTACCTCCAGGTCAGCTGGATCGC...TGTGTGTGTGTGTCGCTGTGCTTGGTGGCAGTGTGCCGTGCTCGTGCCGGCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR CCA 90 bp ACTGCCAAGATGCAGTGCCGCATGTTAGAGGCTGTACAGCCAGGGTCTATGCCCCCACACCCTATGGCATaGGGTGAGCTCCATGCTCAG +
Preference number: 2 (lower is better)
Translates to: TAKMQCRMLEAVQPGSMPPHPMA*GELHAQ
Trigger: CTGAGCATGGAGCTCACCCCATGCCATAGGGTGTGG...GGGCATAGACCCTGGCTGTACAGCCTCTAACATGCGGCACTGCATCTTGGCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR CCA 90 bp AGAGCCGGCACGAGCACGGCACACTGCCACCAAGCACAGCGACACACACACACATACAATGAAAACACTTaGCAGCTCAGGGGGACCTCG +
Preference number: 2 (lower is better)
Translates to: RAGTSTAHCHQAQRHTHTYNENT*QLRGTS
Trigger: CGAGGTCCCCCTGAGCTGCCAAGTGTTTTCATTGTA...TGTGTGTGTGTGTCGCTGTGCTTGGTGGCAGTGTGCCGTGCTCGTGCCGGCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR CCA 90 bp AGAGCCGGCACGAGCACGGCACACTGCCACCAAGCACAGCGACACACACACACACGGGCATCCAGACTTTaGGGGCTGATACAAGAAAAC +
Preference number: 2 (lower is better)
Translates to: RAGTSTAHCHQAQRHTHTRASRL*GLIQEN
Trigger: GTTTTCTTGTATCAGCCCCCAAAGTCTGGATGCCCG...TGTGTGTGTGTGTCGCTGTGCTTGGTGGCAGTGTGCCGTGCTCGTGCCGGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR TCA 90 bp AGAGCCGGCACGAGCACGGCACACTGCCACCAAGCACAGCGACACACACACACAAGGGGCTGGCAGAGTTaGTTTACCTTCCTATCTCTA +
Preference number: 2 (lower is better)
Translates to: RAGTSTAHCHQAQRHTHTRGWQS*FTFLSL
Trigger: TAGAGATAGGAAGGTAAATCAACTCTGCCAGCCCCT...TGTGTGTGTGTGTCGCTGTGCTTGGTGGCAGTGTGCCGTGCTCGTGCCGGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR TCA 90 bp TATCCACTGCTTCTGAGGTCCGCAGCCTCACCTGAAGTCTGTGTCCCTAAGTCTCAGGTGTCTGGGGCATaGAGACGAGGCTTCGGGAGA +
Preference number: 2 (lower is better)
Translates to: YPLLLRSAASPEVCVPKSQVSGA*RRGFGR
Trigger: TCTCCCGAAGCCTCGTCTTCATGCCCCAGACACCTG...AGACTTAGGGACACAGACTTCAGGTGAGGCTGCGGACCTCAGAAGCAGTGGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR GCA 90 bp ACTGCCAAGATGCAGTGCCGCATGTTAGAGGCTGTACAGCCAGGGTCTATGCCCGCAGGTGGCACAATGTaGAGTGCCTATGGCCAAGCA +
Preference number: 2 (lower is better)
Translates to: TAKMQCRMLEAVQPGSMPAGGTM*SAYGQA
Trigger: TGCTTGGCCATAGGCACTGCACATTGTGCCACCTGC...GGGCATAGACCCTGGCTGTACAGCCTCTAACATGCGGCACTGCATCTTGGCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR GCA 90 bp TATCCACTGCTTCTGAGGTCCGCAGCCTCACCTGAAGTCTGTGTCCCTAAGTCTGGCTCCACCACTGCCTaGTCTCCCAACGAAAGCCTG +
Preference number: 2 (lower is better)
Translates to: YPLLLRSAASPEVCVPKSGSTTA*SPNESL
Trigger: CAGGCTTTCGTTGGGAGAGCAGGCAGTGGTGGAGCC...AGACTTAGGGACACAGACTTCAGGTGAGGCTGCGGACCTCAGAAGCAGTGGATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR CCA 90 bp AGAGCCGGCACGAGCACGGCACACTGCCACCAAGCACAGCGACACACACACACATTCGGGAGAAACAGCTaGGTCTCTCACTCTAACCTA +
Preference number: 2 (lower is better)
Translates to: RAGTSTAHCHQAQRHTHTFGRNS*VSHSNL
Trigger: TAGGTTAGAGTGAGAGACCCAGCTGTTTCTCCCGAA...TGTGTGTGTGTGTCGCTGTGCTTGGTGGCAGTGTGCCGTGCTCGTGCCGGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR CCA 90 bp ACTGCCAAGATGCAGTGCCGCATGTTAGAGGCTGTACAGCCAGGGTCTATGCCCGGGCAATCAGGTGTCTaGGGCATGAAGACGAGGCTT +
Preference number: 2 (lower is better)
Translates to: TAKMQCRMLEAVQPGSMPGQSGV*GMKTRL
Trigger: AAGCCTCGTCTTCATGCCCCAGACACCTGATTGCCC...GGGCATAGACCCTGGCTGTACAGCCTCTAACATGCGGCACTGCATCTTGGCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR TCA 90 bp TATCCACTGCTTCTGAGGTCCGCAGCCTCACCTGAAGTCTGTGTCCCTAAGTCTTCTCAGCACCTGGCATaGAGGTGCTACAGCCACTGC +
Preference number: 2 (lower is better)
Translates to: YPLLLRSAASPEVCVPKSSQHLA*RCYSHC
Trigger: GCAGTGGCTGTAGCACCTTCATGCCAGGTGCTGAGA...AGACTTAGGGACACAGACTTCAGGTGAGGCTGCGGACCTCAGAAGCAGTGGATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR TCA 90 bp CAAACGTTACAGCCAGATACCAGTCTGCTGGGAAGAGCCGGCACGAGCACGGCAGTGTATGCAGAGATGTaGACACATAGGAGGCATGGC +
Preference number: 2 (lower is better)
Translates to: QTLQPDTSLLGRAGTSTAVYAEM*THRRHG
Trigger: GCCATGCCTCCTATGTGTTCACATCTCTGCATACAC...TGCCGTGCTCGTGCCGGCTCTTCCCAGCAGACTGGTATCTGGCTGTAACGTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR GCA 90 bp AGAGCCGGCACGAGCACGGCACACTGCCACCAAGCACAGCGACACACACACACAAGGGTCTATGCCCAGTaGCTCTCCAAACTTTGTTTT +
Preference number: 2 (lower is better)
Translates to: RAGTSTAHCHQAQRHTHTRVYAQ*LSKLCF
Trigger: AAAACAAAGTTTGGAGAGGCACTGGGCATAGACCCT...TGTGTGTGTGTGTCGCTGTGCTTGGTGGCAGTGTGCCGTGCTCGTGCCGGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR TCA 90 bp GCACAATCACATGTAAACACAACACCGGGCATCCAGACTTTGGGGGCTGATACACCTTTCCCCCATGGATaGGGCCTCCTGTGCCCTCTT +
Preference number: 2 (lower is better)
Translates to: AQSHVNTTPGIQTLGADTPFPHG*GLLCPL
Trigger: AAGAGGGCACAGGAGGCCTCATCCATGGGGGAAAGG...TGTATCAGCCCCCAAAGTCTGGATGCCCGGTGTTGTGTTTACATGTGATTGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR GCA 90 bp ACTGCCAAGATGCAGTGCCGCATGTTAGAGGCTGTACAGCCAGGGTCTATGCCCACCCACGGAATCTCCTaGCTCCTCAAAGCTTGCTTA +
Preference number: 2 (lower is better)
Translates to: TAKMQCRMLEAVQPGSMPTHGIS*LLKACL
Trigger: TAAGCAAGCTTTGAGGAGGCAGGAGATTCCGTGGGT...GGGCATAGACCCTGGCTGTACAGCCTCTAACATGCGGCACTGCATCTTGGCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR GCA 90 bp CGTGAAGCCAGGGCCTCTCCCCTTCATCCTGAGATAGGACCCTCAAGTTCTATATGGCACAATGTGCAGTaGCTATGGCCAAGCAGAGCC +
Preference number: 2 (lower is better)
Translates to: REARASPLHPEIGPSSSIWHNVQ*LWPSRA
Trigger: GGCTCTGCTTGGCCATAGGCACTGCACATTGTGCCA...TATAGAACTTGAGGGTCCTATCTCAGGATGAAGGGGAGAGGCCCTGGCTTCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR GCA 90 bp GCACAATCACATGTAAACACAACACCGGGCATCCAGACTTTGGGGGCTGATACATGCAGTGTCACTGGCTaGCAGCCTCTGGGAGGCAGA +
Preference number: 2 (lower is better)
Translates to: AQSHVNTTPGIQTLGADTCSVTG*QPLGGR
Trigger: TCTGCCTCCCAGAGGCTGGCAGCCAGTGACACTGCA...TGTATCAGCCCCCAAAGTCTGGATGCCCGGTGTTGTGTTTACATGTGATTGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR CCA 90 bp TCTGGGACTCAGGTCAATGGGGAGGAAGAATTTCCCATTCTCTCAGCACCTGGCCAGGAAGTCGGCACGTaGCTTTGTCCTACTGGTCAC +
Preference number: 2 (lower is better)
Translates to: SGTQVNGEEEFPILSAPGQEVGT*LCPTGH
Trigger: GTGACCAGTAGGACAAAGCCACGTGCCGACTTCCTG...GCCAGGTGCTGAGAGAATGGGAAATTCTTCCTCCCCATTGACCTGAGTCCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR CCA 90 bp ACTGCCAAGATGCAGTGCCGCATGTTAGAGGCTGTACAGCCAGGGTCTATGCCCCCTGCCTCTTTTCCGTaGCACTTCTGTCTCACTTTG +
Preference number: 2 (lower is better)
Translates to: TAKMQCRMLEAVQPGSMPPASFP*HFCLTL
Trigger: CAAAGTGAGACAGAAGTGCCACGGAAAAGAGGCAGG...GGGCATAGACCCTGGCTGTACAGCCTCTAACATGCGGCACTGCATCTTGGCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR CCA 90 bp TATCCACTGCTTCTGAGGTCCGCAGCCTCACCTGAAGTCTGTGTCCCTAAGTCTTCTTCCCACACCCTATaGCATGGGGTGAGCTCCATG +
Preference number: 2 (lower is better)
Translates to: YPLLLRSAASPEVCVPKSSSHTL*HGVSSM
Trigger: CATGGAGCTCACCCCATGCCATAGGGTGTGGGAAGA...AGACTTAGGGACACAGACTTCAGGTGAGGCTGCGGACCTCAGAAGCAGTGGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR CCA 90 bp ACTGCCAAGATGCAGTGCCGCATGTTAGAGGCTGTACAGCCAGGGTCTATGCCCTACAATGAAAACACTTaGCAGCTCAGGGGGACCTCG +
Preference number: 2 (lower is better)
Translates to: TAKMQCRMLEAVQPGSMPYNENT*QLRGTS
Trigger: CGAGGTCCCCCTGAGCTGCCAAGTGTTTTCATTGTA...GGGCATAGACCCTGGCTGTACAGCCTCTAACATGCGGCACTGCATCTTGGCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR CCA 90 bp CAAACGTTACAGCCAGATACCAGTCTGCTGGGAAGAGCCGGCACGAGCACGGCACAGGTACTCAGTATATaGCCGGACTTCAGGAAAGCT +
Preference number: 2 (lower is better)
Translates to: QTLQPDTSLLGRAGTSTAQVLSI*PDFRKA
Trigger: AGCTTTCCTGAAGTCCGGCCATATACTGAGTACCTG...TGCCGTGCTCGTGCCGGCTCTTCCCAGCAGACTGGTATCTGGCTGTAACGTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR CAA 90 bp TGCTTCTTCTCACTGCCACACTCACACTCACGGGACACCCCATGGTaGGCACAGGTGACACTGCATTATGCCAAGACAGGCTCTCAAGAT +
Preference number: 2 (lower is better)
Translates to: CFFSLPHSHSRDTPW*AQVTLHYAKTGSQD
Trigger: ATCTTGAGAGCCTGTCTTGGCATAATGCAGTGTCACCTGTGCCAACCATGGGGTGTCCCGTGAGTGTGAGTGTGGCAGTGAGAAGAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR TCA 90 bp AGACCCATTTGGCTGTATGGCCATGTACATCACCCCTCAATACAGACTGGCAATCGGAGGTCTGGATGCTaGTCGAGAGCAAGCAGAGGC +
Preference number: 2 (lower is better)
Translates to: RPIWLYGHVHHPSIQTGNRRSGC*SRASRG
Trigger: GCCTCTGCTTGCTCTCGATCAGCATCCAGACCTCCG...ATTGCCAGTCTGTATTGAGGGGTGATGTACATGGCCATACAGCCAAATGGGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR GCA 90 bp TATCCACTGCTTCTGAGGTCCGCAGCCTCACCTGAAGTCTGTGTCCCTAAGTCTGAACATGCTGAACTCTaGAGTGTCACTGGCTGCCAG +
Preference number: 2 (lower is better)
Translates to: YPLLLRSAASPEVCVPKSEHAEL*SVTGCQ
Trigger: CTGGCAGCCAGTGACACTGCAGAGTTCAGCATGTTC...AGACTTAGGGACACAGACTTCAGGTGAGGCTGCGGACCTCAGAAGCAGTGGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR GCA 90 bp TATCCACTGCTTCTGAGGTCCGCAGCCTCACCTGAAGTCTGTGTCCCTAAGTCTAGAGTAATGACTGGCTaGTCTGCACGGGGCATTCTG +
Preference number: 2 (lower is better)
Translates to: YPLLLRSAASPEVCVPKSRVMTG*SARGIL
Trigger: CAGAATGCCCCGTGCAGAGCAGCCAGTCATTACTCT...AGACTTAGGGACACAGACTTCAGGTGAGGCTGCGGACCTCAGAAGCAGTGGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR CCA 90 bp ACTCAGGTCAATGGGGAGGAAGAATTTCCCATTCTCTCAGCACCTGGCATGAAGCTCTGTCGTACTGGGTaGCACAGAGGCTGGCCAAAG +
Preference number: 2 (lower is better)
Translates to: TQVNGEEEFPILSAPGMKLCRTG*HRGWPK
Trigger: CTTTGGCCAGCCTCTGTGCCACCCAGTACGACAGAG...CTTCATGCCAGGTGCTGAGAGAATGGGAAATTCTTCCTCCCCATTGACCTGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR CCA 90 bp TATAATCAGGCTCCACTGGGAAAGTTTGAAGTCCAGGTCTCTGGGAAGTGCAGACAACCCTTTCCCCCATaGATGAGGCCTCCTGTGCCC +
Preference number: 2 (lower is better)
Translates to: YNQAPLGKFEVQVSGKCRQPFPP*MRPPVP
Trigger: GGGCACAGGAGGCCTCATCCATGGGGGAAAGGGTTG...TCTGCACTTCCCAGAGACCTGGACTTCAAACTTTCCCAGTGGAGCCTGATTATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR CCA 90 bp GCACAATCACATGTAAACACAACACCGGGCATCCAGACTTTGGGGGCTGATACAAGCCCAAGTTTGGGGTaGCCCAGACCTGATGGTAGG +
Preference number: 2 (lower is better)
Translates to: AQSHVNTTPGIQTLGADTSPSLG*PRPDGR
Trigger: CCTACCATCAGGTCTGGGCCACCCCAAACTTGGGCT...TGTATCAGCCCCCAAAGTCTGGATGCCCGGTGTTGTGTTTACATGTGATTGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR CCA 90 bp TATCCACTGCTTCTGAGGTCCGCAGCCTCACCTGAAGTCTGTGTCCCTAAGTCTCATTCTCTCAGCACCTaGCATGAAGGTGCTACAGCC +
Preference number: 2 (lower is better)
Translates to: YPLLLRSAASPEVCVPKSHSLST*HEGATA
Trigger: GGCTGTAGCACCTTCATGCCAGGTGCTGAGAGAATG...AGACTTAGGGACACAGACTTCAGGTGAGGCTGCGGACCTCAGAAGCAGTGGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR TCA 90 bp AGCGATCCAGCTGACCTGGAGGTACAAAAACATCAGGACCCTGTAGGAGCATCTAGTTCACAGTCAGAATaGGGTTCGCAGCTGCAACCC +
Preference number: 2 (lower is better)
Translates to: SDPADLEVQKHQDPVGASSSQSE*GSQLQP
Trigger: GGGTTGCAGCTGCGAACCTCATTCTGACTGTGAACT...AGATGCTCCTACAGGGTCCTGATGTTTTTGTACCTCCAGGTCAGCTGGATCGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR TCA 90 bp CGTGAAGCCAGGGCCTCTCCCCTTCATCCTGAGATAGGACCCTCAAGTTCTATAAAGAGCAAGCAAGTCTaGCACCTGATTGGGGCAATC +
Preference number: 2 (lower is better)
Translates to: REARASPLHPEIGPSSSIKSKQV*HLIGAI
Trigger: GATTGCCCCAATCAGGTGTCAGACTTGCTTGCTCTT...TATAGAACTTGAGGGTCCTATCTCAGGATGAAGGGGAGAGGCCCTGGCTTCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR TCA 90 bp AGCATCAATATTTGCTGTGGGGGACAGGCAGTGTTCTTGGAATCCCCACACTGGGGGTGCGCACCCAGGTaGGAACAAACAAGAGTAATG +
Preference number: 2 (lower is better)
Translates to: SINICCGGQAVFLESPHWGCAPR*EQTRVM
Trigger: CATTACTCTTGTTTGTTCTCACCTGGGTGCGCACCC...CCAGTGTGGGGATTCCAAGAACACTGCCTGTCCCCCACAGCAAATATTGATGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR GCA 90 bp TATCCACTGCTTCTGAGGTCCGCAGCCTCACCTGAAGTCTGTGTCCCTAAGTCTAATGAGGTTCGCAGCTaGAACCCAGCTATGCAAAGG +
Preference number: 2 (lower is better)
Translates to: YPLLLRSAASPEVCVPKSNEVRS*NPAMQR
Trigger: CCTTTGCATAGCTGGGTTGCAGCTGCGAACCTCATT...AGACTTAGGGACACAGACTTCAGGTGAGGCTGCGGACCTCAGAAGCAGTGGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR GCA 90 bp CGTGAAGCCAGGGCCTCTCCCCTTCATCCTGAGATAGGACCCTCAAGTTCTATAACCCACGGAATCTCCTaGCTCCTCAAAGCTTGCTTA +
Preference number: 2 (lower is better)
Translates to: REARASPLHPEIGPSSSITHGIS*LLKACL
Trigger: TAAGCAAGCTTTGAGGAGGCAGGAGATTCCGTGGGT...TATAGAACTTGAGGGTCCTATCTCAGGATGAAGGGGAGAGGCCCTGGCTTCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR GCA 90 bp TATAATCAGGCTCCACTGGGAAAGTTTGAAGTCCAGGTCTCTGGGAAGTGCAGAACAGAGGCAACCTGGTaGCACGGAGGTCTGGATGCT +
Preference number: 2 (lower is better)
Translates to: YNQAPLGKFEVQVSGKCRTEATW*HGGLDA
Trigger: AGCATCCAGACCTCCGTGGCACCAGGTTGCCTCTGT...TCTGCACTTCCCAGAGACCTGGACTTCAAACTTTCCCAGTGGAGCCTGATTATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR GCA 90 bp TCTGGGACTCAGGTCAATGGGGAGGAAGAATTTCCCATTCTCTCAGCACCTGGCCACCTAACACACTCCTaGCTCTTTTCCGTGGCACTT +
Preference number: 2 (lower is better)
Translates to: SGTQVNGEEEFPILSAPGHLTHS*LFSVAL
Trigger: AAGTGCCACGGAAAAGAGGCAGGAGTGTGTTAGGTG...GCCAGGTGCTGAGAGAATGGGAAATTCTTCCTCCCCATTGACCTGAGTCCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR GCA 90 bp AGCATCAATATTTGCTGTGGGGGACAGGCAGTGTTCTTGGAATCCCCACACTGGGACAGGCATAGAGACTaGCAAGATGCAGTGCCGCAT +
Preference number: 2 (lower is better)
Translates to: SINICCGGQAVFLESPHWDRHRD*QDAVPH
Trigger: ATGCGGCACTGCATCTTGGCAGTCTCTATGCCTGTC...CCAGTGTGGGGATTCCAAGAACACTGCCTGTCCCCCACAGCAAATATTGATGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR CCA 90 bp TCCCCAAACAGAGCAATGGAATTTGGAAATGTCAAGCTCCTTGCAAGACAGCCGTCACGGGACACCCCATaGTTGGCACAGGTGACACTG +
Preference number: 2 (lower is better)
Translates to: SPNRAMEFGNVKLLARQPSRDTP*LAQVTL
Trigger: CAGTGTCACCTGTGCCAACCATGGGGTGTCCCGTGA...CGGCTGTCTTGCAAGGAGCTTGACATTTCCAAATTCCATTGCTCTGTTTGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR CCA 90 bp CAAACGTTACAGCCAGATACCAGTCTGCTGGGAAGAGCCGGCACGAGCACGGCACCCCAAACAGAGCAATaGAATTTGGAAATGTCAAGC +
Preference number: 2 (lower is better)
Translates to: QTLQPDTSLLGRAGTSTAPQTEQ*NLEMSS
Trigger: GCTTGACATTTCCAAATTCCATTGCTCTGTTTGGGG...TGCCGTGCTCGTGCCGGCTCTTCCCAGCAGACTGGTATCTGGCTGTAACGTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR CCA 90 bp GCACAATCACATGTAAACACAACACCGGGCATCCAGACTTTGGGGGCTGATACAACAACAGAGGCAACCTaGTGCCACGGAGGTCTGGAT +
Preference number: 2 (lower is better)
Translates to: AQSHVNTTPGIQTLGADTTTEAT*CHGGLD
Trigger: ATCCAGACCTCCGTGGCACCAGGTTGCCTCTGTTGT...TGTATCAGCCCCCAAAGTCTGGATGCCCGGTGTTGTGTTTACATGTGATTGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR CCA 90 bp TCTGGGACTCAGGTCAATGGGGAGGAAGAATTTCCCATTCTCTCAGCACCTGGCCCTGCCTCTTTTCCGTaGCACTTCTGTCTCACTTTG +
Preference number: 2 (lower is better)
Translates to: SGTQVNGEEEFPILSAPGPASFP*HFCLTL
Trigger: CAAAGTGAGACAGAAGTGCCACGGAAAAGAGGCAGG...GCCAGGTGCTGAGAGAATGGGAAATTCTTCCTCCCCATTGACCTGAGTCCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR CCA 90 bp GCACAATCACATGTAAACACAACACCGGGCATCCAGACTTTGGGGGCTGATACATCTTCCCACACCCTATaGCATGGGGTGAGCTCCATG +
Preference number: 2 (lower is better)
Translates to: AQSHVNTTPGIQTLGADTSSHTL*HGVSSM
Trigger: CATGGAGCTCACCCCATGCCATAGGGTGTGGGAAGA...TGTATCAGCCCCCAAAGTCTGGATGCCCGGTGTTGTGTTTACATGTGATTGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR CCA 90 bp TCTGGGACTCAGGTCAATGGGGAGGAAGAATTTCCCATTCTCTCAGCACCTGGCAACAAGAGTAATGACTaGCTGCTCTGCACGGGGCAT +
Preference number: 2 (lower is better)
Translates to: SGTQVNGEEEFPILSAPGNKSND*LLCTGH
Trigger: ATGCCCCGTGCAGAGCAGCCAGTCATTACTCTTGTT...GCCAGGTGCTGAGAGAATGGGAAATTCTTCCTCCCCATTGACCTGAGTCCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR CAA 90 bp GACAGGCAGTGTTCTTGGAATCCCCACACTGGTACACAGACCCATTaGGCTGTATGGCCATGTACATCACCCCTCAATACAGACTGGCAA +
Preference number: 2 (lower is better)
Translates to: DRQCSWNPHTGTQTH*AVWPCTSPLNTDWQ
Trigger: TTGCCAGTCTGTATTGAGGGGTGATGTACATGGCCATACAGCCAAATGGGTCTGTGTACCAGTGTGGGGATTCCAAGAACACTGCCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR TCA 90 bp CGTGAAGCCAGGGCCTCTCCCCTTCATCCTGAGATAGGACCCTCAAGTTCTATAGTCAGTGTTCTGTACTaGAATTCCACAGGGATGGCA +
Preference number: 2 (lower is better)
Translates to: REARASPLHPEIGPSSSIVSVLY*NSTGMA
Trigger: TGCCATCCCTGTGGAATTTCAGTACAGAACACTGAC...TATAGAACTTGAGGGTCCTATCTCAGGATGAAGGGGAGAGGCCCTGGCTTCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR TCA 90 bp TATAATCAGGCTCCACTGGGAAAGTTTGAAGTCCAGGTCTCTGGGAAGTGCAGAGTAGGAGCATCTCTCTaGTGGCCCGATGAGCTTCTC +
Preference number: 2 (lower is better)
Translates to: YNQAPLGKFEVQVSGKCRVGASL*WPDELL
Trigger: GAGAAGCTCATCGGGCCATCAGAGAGATGCTCCTAC...TCTGCACTTCCCAGAGACCTGGACTTCAAACTTTCCCAGTGGAGCCTGATTATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR TCA 90 bp TATCCACTGCTTCTGAGGTCCGCAGCCTCACCTGAAGTCTGTGTCCCTAAGTCTAAACAGCGATCCAGCTaGCCTGGAGGTACAAAAACA +
Preference number: 2 (lower is better)
Translates to: YPLLLRSAASPEVCVPKSKQRSS*PGGTKT
Trigger: TGTTTTTGTACCTCCAGGTCAGCTGGATCGCTGTTT...AGACTTAGGGACACAGACTTCAGGTGAGGCTGCGGACCTCAGAAGCAGTGGATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR TCA 90 bp AGCATCAATATTTGCTGTGGGGGACAGGCAGTGTTCTTGGAATCCCCACACTGGAAGAGCAAGCAAGTCTaGCACCTGATTGGGGCAATC +
Preference number: 2 (lower is better)
Translates to: SINICCGGQAVFLESPHWKSKQV*HLIGAI
Trigger: GATTGCCCCAATCAGGTGTCAGACTTGCTTGCTCTT...CCAGTGTGGGGATTCCAAGAACACTGCCTGTCCCCCACAGCAAATATTGATGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR GCA 90 bp GCCCTCGATGCTTCTTCTCACTGCCACACTCACACTCACGGGACACCCCATGGTTCTTTCTTCTTTCTCTaGCGCTTTCCTTGTTTGTCA +
Preference number: 2 (lower is better)
Translates to: ALDASSHCHTHTHGTPHGSFFFL*RFPCLS
Trigger: TGACAAACAAGGAAAGCGGCAGAGAAAGAAGAAAGA...ACCATGGGGTGTCCCGTGAGTGTGAGTGTGGCAGTGAGAAGAAGCATCGAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR GCA 90 bp GAAGCCCTGAAACATGGCGATGTGTCTGTTTACAATGAAAACACTTGGCAGCTCACAGAGGCAACCTGGTaGCACGGAGGTCTGGATGCT +
Preference number: 2 (lower is better)
Translates to: EALKHGDVSVYNENTWQLTEATW*HGGLDA
Trigger: AGCATCCAGACCTCCGTGGCACCAGGTTGCCTCTGT...GAGCTGCCAAGTGTTTTCATTGTAAACAGACACATCGCCATGTTTCAGGGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR GCA 90 bp TATAATCAGGCTCCACTGGGAAAGTTTGAAGTCCAGGTCTCTGGGAAGTGCAGAGCAGGTGGCACAATGTaGAGTGCCTATGGCCAAGCA +
Preference number: 2 (lower is better)
Translates to: YNQAPLGKFEVQVSGKCRAGGTM*SAYGQA
Trigger: TGCTTGGCCATAGGCACTGCACATTGTGCCACCTGC...TCTGCACTTCCCAGAGACCTGGACTTCAAACTTTCCCAGTGGAGCCTGATTATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR CCA 90 bp TATCCACTGCTTCTGAGGTCCGCAGCCTCACCTGAAGTCTGTGTCCCTAAGTCTTTTATAATCAGAGAATaGGGGTACACAGGCCCTCCC +
Preference number: 2 (lower is better)
Translates to: YPLLLRSAASPEVCVPKSFIIRE*GYTGPP
Trigger: GGGAGGGCCTGTGTACCCCCATTCTCTGATTATAAA...AGACTTAGGGACACAGACTTCAGGTGAGGCTGCGGACCTCAGAAGCAGTGGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR CCA 90 bp ACTGCCAAGATGCAGTGCCGCATGTTAGAGGCTGTACAGCCAGGGTCTATGCCCCCCCAAACAGAGCAATaGAATTTGGAAATGTCAAGC +
Preference number: 2 (lower is better)
Translates to: TAKMQCRMLEAVQPGSMPPQTEQ*NLEMSS
Trigger: GCTTGACATTTCCAAATTCCATTGCTCTGTTTGGGG...GGGCATAGACCCTGGCTGTACAGCCTCTAACATGCGGCACTGCATCTTGGCAGT
51% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR CCA 90 bp CAAACGTTACAGCCAGATACCAGTCTGCTGGGAAGAGCCGGCACGAGCACGGCACACTGTATATACAACTaGCCTGGTAGGTTACAAAAG +
Preference number: 2 (lower is better)
Translates to: QTLQPDTSLLGRAGTSTAHCIYN*PGRLQK
Trigger: CTTTTGTAACCTACCAGGCCAGTTGTATATACAGTG...TGCCGTGCTCGTGCCGGCTCTTCCCAGCAGACTGGTATCTGGCTGTAACGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR CCA 90 bp CTCAGTTTTCCTGTCTGCACAACAGGTACTCCGATGCTCAGTGTGAGACTAGAGGAGGTGATGAGCAGGTaGCACAATGTGCAGTGCCTA +
Preference number: 2 (lower is better)
Translates to: LSFPVCTTGTPMLSVRLEEVMSR*HNVQCL
Trigger: TAGGCACTGCACATTGTGCCACCTGCTCATCACCTC...CTCTAGTCTCACACTGAGCATCGGAGTACCTGTTGTGCAGACAGGAAAACTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR CCA 90 bp GAAGCCCTGAAACATGGCGATGTGTCTGTTTACAATGAAAACACTTGGCAGCTCCCACACCCTATGGCATaGGGTGAGCTCCATGCTCAG +
Preference number: 2 (lower is better)
Translates to: EALKHGDVSVYNENTWQLPHPMA*GELHAQ
Trigger: CTGAGCATGGAGCTCACCCCATGCCATAGGGTGTGG...GAGCTGCCAAGTGTTTTCATTGTAAACAGACACATCGCCATGTTTCAGGGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR CCA 90 bp CAAACGTTACAGCCAGATACCAGTCTGCTGGGAAGAGCCGGCACGAGCACGGCAAGACATTTTCCTTTCTaGTCCATCCCCAACATAAAC +
Preference number: 2 (lower is better)
Translates to: QTLQPDTSLLGRAGTSTARHFPF*SIPNIN
Trigger: GTTTATGTTGGGGATGGACCAGAAAGGAAAATGTCT...TGCCGTGCTCGTGCCGGCTCTTCCCAGCAGACTGGTATCTGGCTGTAACGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR CCA 90 bp CTTAAGAGGAGTGCAAGATCATTCAGAGAACACAGAGAAGCATGCTCCACTTACGAGGCAGCCCAAGTTTaGGGTGGCCCAGACCTGATG +
Preference number: 2 (lower is better)
Translates to: LKRSARSFREHREACSTYEAAQV*GGPDLM
Trigger: CATCAGGTCTGGGCCACCCCAAACTTGGGCTGCCTC...GTAAGTGGAGCATGCTTCTCTGTGTTCTCTGAATGATCTTGCACTCCTCTTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR CCA 90 bp GCACAATCACATGTAAACACAACACCGGGCATCCAGACTTTGGGGGCTGATACATTTGCCTATCTCCCATaGAGCCACACGTCAGAGGCA +
Preference number: 2 (lower is better)
Translates to: AQSHVNTTPGIQTLGADTFAYLP*SHTSEA
Trigger: TGCCTCTGACGTGTGGCTCCATGGGAGATAGGCAAA...TGTATCAGCCCCCAAAGTCTGGATGCCCGGTGTTGTGTTTACATGTGATTGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR CAA 90 bp CCCAGCTATGCAAAGGTGAAGCAGCCAGGAAGTCGGCACGTGGCTTaGTCCTACTGGTCACTATCAAACACAGTAGGAATGATGACAGTT +
Preference number: 2 (lower is better)
Translates to: PSYAKVKQPGSRHVA*SYWSLSNTVGMMTV
Trigger: AACTGTCATCATTCCTACTGTGTTTGATAGTGACCAGTAGGACAAAGCCACGTGCCGACTTCCTGGCTGCTTCACCTTTGCATAGCTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR TCA 90 bp TCTGGGACTCAGGTCAATGGGGAGGAAGAATTTCCCATTCTCTCAGCACCTGGCGGGGTATTCCAAGGATaGTCCACATTTGGGTTTATC +
Preference number: 2 (lower is better)
Translates to: SGTQVNGEEEFPILSAPGGVFQG*STFGFI
Trigger: GATAAACCCAAATGTGGATCATCCTTGGAATACCCC...GCCAGGTGCTGAGAGAATGGGAAATTCTTCCTCCCCATTGACCTGAGTCCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR TCA 90 bp AGCATCAATATTTGCTGTGGGGGACAGGCAGTGTTCTTGGAATCCCCACACTGGAGGGGCTGGCAGAGTTaGTTTACCTTCCTATCTCTA +
Preference number: 2 (lower is better)
Translates to: SINICCGGQAVFLESPHWRGWQS*FTFLSL
Trigger: TAGAGATAGGAAGGTAAATCAACTCTGCCAGCCCCT...CCAGTGTGGGGATTCCAAGAACACTGCCTGTCCCCCACAGCAAATATTGATGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR TCA 90 bp AGACCCATTTGGCTGTATGGCCATGTACATCACCCCTCAATACAGACTGGCAATAGCAAGTCTGACACCTaGTTGGGGCAATCAGGTGTC +
Preference number: 2 (lower is better)
Translates to: RPIWLYGHVHHPSIQTGNSKSDT*LGQSGV
Trigger: GACACCTGATTGCCCCAATCAGGTGTCAGACTTGCT...ATTGCCAGTCTGTATTGAGGGGTGATGTACATGGCCATACAGCCAAATGGGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR TCA 90 bp TATAATCAGGCTCCACTGGGAAAGTTTGAAGTCCAGGTCTCTGGGAAGTGCAGAATGCCGTTGAAGCCCTaGAACATGGCGATGTGTCTG +
Preference number: 2 (lower is better)
Translates to: YNQAPLGKFEVQVSGKCRMPLKP*NMAMCL
Trigger: CAGACACATCGCCATGTTTCAGGGCTTCAACGGCAT...TCTGCACTTCCCAGAGACCTGGACTTCAAACTTTCCCAGTGGAGCCTGATTATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR TCA 90 bp ACTCAGGTCAATGGGGAGGAAGAATTTCCCATTCTCTCAGCACCTGGCATGAAGCAACGCAGTCAAGGGTaGAGCAGAACAATGCTGGAA +
Preference number: 2 (lower is better)
Translates to: TQVNGEEEFPILSAPGMKQRSQG*SRTMLE
Trigger: TTCCAGCATTGTTCTGCTTCACCCTTGACTGCGTTG...CTTCATGCCAGGTGCTGAGAGAATGGGAAATTCTTCCTCCCCATTGACCTGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR GCA 90 bp GCACAATCACATGTAAACACAACACCGGGCATCCAGACTTTGGGGGCTGATACAAATGAGGTTCGCAGCTaGAACCCAGCTATGCAAAGG +
Preference number: 2 (lower is better)
Translates to: AQSHVNTTPGIQTLGADTNEVRS*NPAMQR
Trigger: CCTTTGCATAGCTGGGTTGCAGCTGCGAACCTCATT...TGTATCAGCCCCCAAAGTCTGGATGCCCGGTGTTGTGTTTACATGTGATTGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR GCA 90 bp AGCATCAATATTTGCTGTGGGGGACAGGCAGTGTTCTTGGAATCCCCACACTGGCTCAGTTTTCCTGTCTaGACAACAGGTACTCCGATG +
Preference number: 2 (lower is better)
Translates to: SINICCGGQAVFLESPHWLSFPV*TTGTPM
Trigger: CATCGGAGTACCTGTTGTGCAGACAGGAAAACTGAG...CCAGTGTGGGGATTCCAAGAACACTGCCTGTCCCCCACAGCAAATATTGATGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR CCA 90 bp CTGGAGTGCTGTCCTAAGTCTTCCCCAAACAGAGCAATGGAATTTGGAAATGTCCAGGAAGTCGGCACGTaGCTTTGTCCTACTGGTCAC +
Preference number: 2 (lower is better)
Translates to: LECCPKSSPNRAMEFGNVQEVGT*LCPTGH
Trigger: GTGACCAGTAGGACAAAGCCACGTGCCGACTTCCTG...GACATTTCCAAATTCCATTGCTCTGTTTGGGGAAGACTTAGGACAGCACTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR CCA 90 bp GAAGCCCTGAAACATGGCGATGTGTCTGTTTACAATGAAAACACTTGGCAGCTCACAACAGAGGCAACCTaGTGCCACGGAGGTCTGGAT +
Preference number: 2 (lower is better)
Translates to: EALKHGDVSVYNENTWQLTTEAT*CHGGLD
Trigger: ATCCAGACCTCCGTGGCACCAGGTTGCCTCTGTTGT...GAGCTGCCAAGTGTTTTCATTGTAAACAGACACATCGCCATGTTTCAGGGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR CCA 90 bp TATCCACTGCTTCTGAGGTCCGCAGCCTCACCTGAAGTCTGTGTCCCTAAGTCTTCTGTCACCTCAATTTaGGGAGGCTATAACTTCACC +
Preference number: 2 (lower is better)
Translates to: YPLLLRSAASPEVCVPKSSVTSI*GGYNFT
Trigger: GGTGAAGTTATAGCCTCCCCAAATTGAGGTGACAGA...AGACTTAGGGACACAGACTTCAGGTGAGGCTGCGGACCTCAGAAGCAGTGGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR CCA 90 bp TATAATCAGGCTCCACTGGGAAAGTTTGAAGTCCAGGTCTCTGGGAAGTGCAGAGAGGTGATGAGCAGGTaGCACAATGTGCAGTGCCTA +
Preference number: 2 (lower is better)
Translates to: YNQAPLGKFEVQVSGKCREVMSR*HNVQCL
Trigger: TAGGCACTGCACATTGTGCCACCTGCTCATCACCTC...TCTGCACTTCCCAGAGACCTGGACTTCAAACTTTCCCAGTGGAGCCTGATTATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR CCA 90 bp TATAATCAGGCTCCACTGGGAAAGTTTGAAGTCCAGGTCTCTGGGAAGTGCAGAAGTCTGACACCTGATTaGGGCAATCAGGTGTCTGGG +
Preference number: 2 (lower is better)
Translates to: YNQAPLGKFEVQVSGKCRSLTPD*GNQVSG
Trigger: CCCAGACACCTGATTGCCCCAATCAGGTGTCAGACT...TCTGCACTTCCCAGAGACCTGGACTTCAAACTTTCCCAGTGGAGCCTGATTATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR CCA 90 bp CGTGAAGCCAGGGCCTCTCCCCTTCATCCTGAGATAGGACCCTCAAGTTCTATATTTAGTGCCCTGGCTTaGCAGGAAATTTCCCATAGA +
Preference number: 2 (lower is better)
Translates to: REARASPLHPEIGPSSSIFSALA*QEISHR
Trigger: TCTATGGGAAATTTCCTGCCAAGCCAGGGCACTAAA...TATAGAACTTGAGGGTCCTATCTCAGGATGAAGGGGAGAGGCCCTGGCTTCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR TCA 90 bp TCTGGGACTCAGGTCAATGGGGAGGAAGAATTTCCCATTCTCTCAGCACCTGGCAGCCCAATCATCTCTTaGAAATCCAAACCAAACAGG +
Preference number: 2 (lower is better)
Translates to: SGTQVNGEEEFPILSAPGSPIIS*KSKPNR
Trigger: CCTGTTTGGTTTGGATTTTCAAGAGATGATTGGGCT...GCCAGGTGCTGAGAGAATGGGAAATTCTTCCTCCCCATTGACCTGAGTCCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR TCA 90 bp AGACCCATTTGGCTGTATGGCCATGTACATCACCCCTCAATACAGACTGGCAATCACTTTGAGAGGCTCTaGGGCCAAAGACTCATTCCA +
Preference number: 2 (lower is better)
Translates to: RPIWLYGHVHHPSIQTGNHFERL*GQRLIP
Trigger: TGGAATGAGTCTTTGGCCTCAGAGCCTCTCAAAGTG...ATTGCCAGTCTGTATTGAGGGGTGATGTACATGGCCATACAGCCAAATGGGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR GCA 90 bp ACTGCCAAGATGCAGTGCCGCATGTTAGAGGCTGTACAGCCAGGGTCTATGCCCTTTCTTAACTTTGTTTaGAAACCTACACGCCTCTTC +
Preference number: 2 (lower is better)
Translates to: TAKMQCRMLEAVQPGSMPFLNFV*KPTRLF
Trigger: GAAGAGGCGTGTAGGTTTGCAAACAAAGTTAAGAAA...GGGCATAGACCCTGGCTGTACAGCCTCTAACATGCGGCACTGCATCTTGGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR GCA 90 bp GTTTCCTGGAGTGCTGTCCTAAGTCTTCCCCAAACAGAGCAATGGAATTTGGAAGATGCTTCTTCTCACTaGCACACTCACACTCACGGG +
Preference number: 2 (lower is better)
Translates to: VSWSAVLSLPQTEQWNLEDASSH*HTHTHG
Trigger: CCCGTGAGTGTGAGTGTGGCAGTGAGAAGAAGCATC...TTCCAAATTCCATTGCTCTGTTTGGGGAAGACTTAGGACAGCACTCCAGGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR CCA 90 bp CGTGAAGCCAGGGCCTCTCCCCTTCATCCTGAGATAGGACCCTCAAGTTCTATAGTGGCTTTGTCCTACTaGTCACTATCAAACACAGTA +
Preference number: 2 (lower is better)
Translates to: REARASPLHPEIGPSSSIVALSY*SLSNTV
Trigger: TACTGTGTTTGATAGTGACCAGTAGGACAAAGCCAC...TATAGAACTTGAGGGTCCTATCTCAGGATGAAGGGGAGAGGCCCTGGCTTCACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR CCA 90 bp TTTACAATGAAAACACTTGGCAGCTCAGGGGGACCTCGAAGAGCAAGCAAGTCTGCGATCCAGCTGACCTaGAGGTACAAAAACATCAGG +
Preference number: 2 (lower is better)
Translates to: FTMKTLGSSGGPRRASKSAIQLT*RYKNIR
Trigger: CCTGATGTTTTTGTACCTCCAGGTCAGCTGGATCGC...AGACTTGCTTGCTCTTCGAGGTCCCCCTGAGCTGCCAAGTGTTTTCATTGTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR CCA 90 bp GAAGCCCTGAAACATGGCGATGTGTCTGTTTACAATGAAAACACTTGGCAGCTCAGTCTGACACCTGATTaGGGCAATCAGGTGTCTGGG +
Preference number: 2 (lower is better)
Translates to: EALKHGDVSVYNENTWQLSLTPD*GNQVSG
Trigger: CCCAGACACCTGATTGCCCCAATCAGGTGTCAGACT...GAGCTGCCAAGTGTTTTCATTGTAAACAGACACATCGCCATGTTTCAGGGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR CCA 90 bp AGACCCATTTGGCTGTATGGCCATGTACATCACCCCTCAATACAGACTGGCAATAACAAGAGTAATGACTaGCTGCTCTGCACGGGGCAT +
Preference number: 2 (lower is better)
Translates to: RPIWLYGHVHHPSIQTGNNKSND*LLCTGH
Trigger: ATGCCCCGTGCAGAGCAGCCAGTCATTACTCTTGTT...ATTGCCAGTCTGTATTGAGGGGTGATGTACATGGCCATACAGCCAAATGGGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR TCA 90 bp TATAATCAGGCTCCACTGGGAAAGTTTGAAGTCCAGGTCTCTGGGAAGTGCAGAGTCAGTGTTCTGTACTaGAATTCCACAGGGATGGCA +
Preference number: 2 (lower is better)
Translates to: YNQAPLGKFEVQVSGKCRVSVLY*NSTGMA
Trigger: TGCCATCCCTGTGGAATTTCAGTACAGAACACTGAC...TCTGCACTTCCCAGAGACCTGGACTTCAAACTTTCCCAGTGGAGCCTGATTATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR TCA 90 bp CTTAAGAGGAGTGCAAGATCATTCAGAGAACACAGAGAAGCATGCTCCACTTACAGTTCACAGTCAGAATaGGGTTCGCAGCTGCAACCC +
Preference number: 2 (lower is better)
Translates to: LKRSARSFREHREACSTYSSQSE*GSQLQP
Trigger: GGGTTGCAGCTGCGAACCTCATTCTGACTGTGAACT...GTAAGTGGAGCATGCTTCTCTGTGTTCTCTGAATGATCTTGCACTCCTCTTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR TCA 90 bp TCTGGGACTCAGGTCAATGGGGAGGAAGAATTTCCCATTCTCTCAGCACCTGGCAAACCCGGAAAAACCTaGCAACACTGTATATACAAC +
Preference number: 2 (lower is better)
Translates to: SGTQVNGEEEFPILSAPGKPGKT*QHCIYN
Trigger: GTTGTATATACAGTGTTGTCAGGTTTTTCCGGGTTT...GCCAGGTGCTGAGAGAATGGGAAATTCTTCCTCCCCATTGACCTGAGTCCCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR GCA 90 bp TTTACAATGAAAACACTTGGCAGCTCAGGGGGACCTCGAAGAGCAAGCAAGTCTCTCAGTTTTCCTGTCTaGACAACAGGTACTCCGATG +
Preference number: 2 (lower is better)
Translates to: FTMKTLGSSGGPRRASKSLSFPV*TTGTPM
Trigger: CATCGGAGTACCTGTTGTGCAGACAGGAAAACTGAG...AGACTTGCTTGCTCTTCGAGGTCCCCCTGAGCTGCCAAGTGTTTTCATTGTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR GCA 90 bp CGTGAAGCCAGGGCCTCTCCCCTTCATCCTGAGATAGGACCCTCAAGTTCTATATATAGTTTGGAGCTGTaGTTCTGGTGGAACACAATA +
Preference number: 2 (lower is better)
Translates to: REARASPLHPEIGPSSSIYSLEL*FWWNTI
Trigger: TATTGTGTTCCACCAGAAGCACAGCTCCAAACTATA...TATAGAACTTGAGGGTCCTATCTCAGGATGAAGGGGAGAGGCCCTGGCTTCACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR CCA 90 bp AGACCCATTTGGCTGTATGGCCATGTACATCACCCCTCAATACAGACTGGCAATCAGGTACTCAGTATATaGCCGGACTTCAGGAAAGCT +
Preference number: 2 (lower is better)
Translates to: RPIWLYGHVHHPSIQTGNQVLSI*PDFRKA
Trigger: AGCTTTCCTGAAGTCCGGCCATATACTGAGTACCTG...ATTGCCAGTCTGTATTGAGGGGTGATGTACATGGCCATACAGCCAAATGGGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR CCA 90 bp GCACAATCACATGTAAACACAACACCGGGCATCCAGACTTTGGGGGCTGATACAATAATCAGGCTCCACTaGGAAAGTTTGAAGTCCAGG +
Preference number: 2 (lower is better)
Translates to: AQSHVNTTPGIQTLGADTIIRLH*ESLKSR
Trigger: CCTGGACTTCAAACTTTCCCAGTGGAGCCTGATTAT...TGTATCAGCCCCCAAAGTCTGGATGCCCGGTGTTGTGTTTACATGTGATTGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR CCA 90 bp ACTCAGGTCAATGGGGAGGAAGAATTTCCCATTCTCTCAGCACCTGGCATGAAGATAATCAGGCTCCACTaGGAAAGTTTGAAGTCCAGG +
Preference number: 2 (lower is better)
Translates to: TQVNGEEEFPILSAPGMKIIRLH*ESLKSR
Trigger: CCTGGACTTCAAACTTTCCCAGTGGAGCCTGATTAT...CTTCATGCCAGGTGCTGAGAGAATGGGAAATTCTTCCTCCCCATTGACCTGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR CCA 90 bp CTTAAGAGGAGTGCAAGATCATTCAGAGAACACAGAGAAGCATGCTCCACTTACCATTCTCTCAGCACCTaGCATGAAGGTGCTACAGCC +
Preference number: 2 (lower is better)
Translates to: LKRSARSFREHREACSTYHSLST*HEGATA
Trigger: GGCTGTAGCACCTTCATGCCAGGTGCTGAGAGAATG...GTAAGTGGAGCATGCTTCTCTGTGTTCTCTGAATGATCTTGCACTCCTCTTAAG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR CAA 90 bp GCTAAGAGGCAAGGAGAATGGGGGTATTCCAAGGATGATCCACATTaGGGTTTATCTGTTTATAATCAGAGAATGGGGGTACACAGGCCC +
Preference number: 2 (lower is better)
Translates to: AKRQGEWGYSKDDPH*GLSVYNQRMGVHRP
Trigger: GGGCCTGTGTACCCCCATTCTCTGATTATAAACAGATAAACCCAAATGTGGATCATCCTTGGAATACCCCCATTCTCCTTGCCTCTTAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR CAA 90 bp TCCTGGAGTGCTGTCCTAAGTCTTCCCCAAACAGAGCAATGGAATTaGGAAATGTCAAGCTCCTTGCAAGACAGCCGATGTGAAAGACAA +
Preference number: 2 (lower is better)
Translates to: SWSAVLSLPQTEQWN*EMSSSLQDSRCERQ
Trigger: TTGTCTTTCACATCGGCTGTCTTGCAAGGAGCTTGACATTTCCAAATTCCATTGCTCTGTTTGGGGAAGACTTAGGACAGCACTCCAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR TCA 90 bp TCCCCAAACAGAGCAATGGAATTTGGAAATGTCAAGCTCCTTGCAAGACAGCCGGGGGTATTCCAAGGATaGTCCACATTTGGGTTTATC +
Preference number: 2 (lower is better)
Translates to: SPNRAMEFGNVKLLARQPGVFQG*STFGFI
Trigger: GATAAACCCAAATGTGGATCATCCTTGGAATACCCC...CGGCTGTCTTGCAAGGAGCTTGACATTTCCAAATTCCATTGCTCTGTTTGGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR TCA 90 bp CTTAAGAGGAGTGCAAGATCATTCAGAGAACACAGAGAAGCATGCTCCACTTACCATGGTTGGCACAGGTaGCACTGCATTATGCCAAGA +
Preference number: 2 (lower is better)
Translates to: LKRSARSFREHREACSTYHGWHR*HCIMPR
Trigger: TCTTGGCATAATGCAGTGTCACCTGTGCCAACCATG...GTAAGTGGAGCATGCTTCTCTGTGTTCTCTGAATGATCTTGCACTCCTCTTAAG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR TCA 90 bp TTTACAATGAAAACACTTGGCAGCTCAGGGGGACCTCGAAGAGCAAGCAAGTCTAAGCAGAGACAGAGATaGACTCAGAAGTTAGGATGG +
Preference number: 2 (lower is better)
Translates to: FTMKTLGSSGGPRRASKSKQRQR*TQKLGW
Trigger: CCATCCTAACTTCTGAGTTCATCTCTGTCTCTGCTT...AGACTTGCTTGCTCTTCGAGGTCCCCCTGAGCTGCCAAGTGTTTTCATTGTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR TCA 90 bp AGCGATCCAGCTGACCTGGAGGTACAAAAACATCAGGACCCTGTAGGAGCATCTAAACCCGGAAAAACCTaGCAACACTGTATATACAAC +
Preference number: 2 (lower is better)
Translates to: SDPADLEVQKHQDPVGASKPGKT*QHCIYN
Trigger: GTTGTATATACAGTGTTGTCAGGTTTTTCCGGGTTT...AGATGCTCCTACAGGGTCCTGATGTTTTTGTACCTCCAGGTCAGCTGGATCGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR TCA 90 bp AGACCCATTTGGCTGTATGGCCATGTACATCACCCCTCAATACAGACTGGCAATCTAACTCATCTCCTATaGAATGTGGTGGGAACAGAG +
Preference number: 2 (lower is better)
Translates to: RPIWLYGHVHHPSIQTGNLTHLL*NVVGTE
Trigger: CTCTGTTCCCACCACATTTCATAGGAGATGAGTTAG...ATTGCCAGTCTGTATTGAGGGGTGATGTACATGGCCATACAGCCAAATGGGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR TCA 90 bp AGACCCATTTGGCTGTATGGCCATGTACATCACCCCTCAATACAGACTGGCAATAGTCAAACTCATACATaGGTTCCAAAGAGCAACCCC +
Preference number: 2 (lower is better)
Translates to: RPIWLYGHVHHPSIQTGNSQTHT*VPKSNP
Trigger: GGGGTTGCTCTTTGGAACTCATGTATGAGTTTGACT...ATTGCCAGTCTGTATTGAGGGGTGATGTACATGGCCATACAGCCAAATGGGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR GCA 90 bp ACTCAGGTCAATGGGGAGGAAGAATTTCCCATTCTCTCAGCACCTGGCATGAAGAAATGTCAAGCTCCTTaGAAGACAGCCGATGTGAAA +
Preference number: 2 (lower is better)
Translates to: TQVNGEEEFPILSAPGMKKCQAP*KTADVK
Trigger: TTTCACATCGGCTGTCTTGCAAGGAGCTTGACATTT...CTTCATGCCAGGTGCTGAGAGAATGGGAAATTCTTCCTCCCCATTGACCTGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR CCA 90 bp GTTTCCTGGAGTGCTGTCCTAAGTCTTCCCCAAACAGAGCAATGGAATTTGGAATTTATAATCAGAGAATaGGGGTACACAGGCCCTCCC +
Preference number: 2 (lower is better)
Translates to: VSWSAVLSLPQTEQWNLEFIIRE*GYTGPP
Trigger: GGGAGGGCCTGTGTACCCCCATTCTCTGATTATAAA...TTCCAAATTCCATTGCTCTGTTTGGGGAAGACTTAGGACAGCACTCCAGGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR CCA 90 bp ACTCAGGTCAATGGGGAGGAAGAATTTCCCATTCTCTCAGCACCTGGCATGAAGTTGTCATCTGTTTCCTaGAGTGCTGTCCTAAGTCTT +
Preference number: 2 (lower is better)
Translates to: TQVNGEEEFPILSAPGMKLSSVS*SAVLSL
Trigger: AAGACTTAGGACAGCACTCCAGGAAACAGATGACAA...CTTCATGCCAGGTGCTGAGAGAATGGGAAATTCTTCCTCCCCATTGACCTGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR CCA 90 bp AGCATCAATATTTGCTGTGGGGGACAGGCAGTGTTCTTGGAATCCCCACACTGGCACTGTATATACAACTaGCCTGGTAGGTTACAAAAG +
Preference number: 2 (lower is better)
Translates to: SINICCGGQAVFLESPHWHCIYN*PGRLQK
Trigger: CTTTTGTAACCTACCAGGCCAGTTGTATATACAGTG...CCAGTGTGGGGATTCCAAGAACACTGCCTGTCCCCCACAGCAAATATTGATGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR CCA 90 bp ACTCAGGTCAATGGGGAGGAAGAATTTCCCATTCTCTCAGCACCTGGCATGAAGTCCTATGAAATGTGGTaGGAACAGAGATTAGGAAGG +
Preference number: 2 (lower is better)
Translates to: TQVNGEEEFPILSAPGMKSYEMW*EQRLGR
Trigger: CCTTCCTAATCTCTGTTCCCACCACATTTCATAGGA...CTTCATGCCAGGTGCTGAGAGAATGGGAAATTCTTCCTCCCCATTGACCTGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR CCA 90 bp TATAATCAGGCTCCACTGGGAAAGTTTGAAGTCCAGGTCTCTGGGAAGTGCAGAAAGAATTTAGTGCCCTaGCTTGGCAGGAAATTTCCC +
Preference number: 2 (lower is better)
Translates to: YNQAPLGKFEVQVSGKCRKNLVP*LGRKFP
Trigger: GGGAAATTTCCTGCCAAGCCAGGGCACTAAATTCTT...TCTGCACTTCCCAGAGACCTGGACTTCAAACTTTCCCAGTGGAGCCTGATTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR CCA 90 bp ACTCAGGTCAATGGGGAGGAAGAATTTCCCATTCTCTCAGCACCTGGCATGAAGTTCCATATAATATCCTaGCAGCACACAGAAACTGCC +
Preference number: 2 (lower is better)
Translates to: TQVNGEEEFPILSAPGMKFHIIS*QHTETA
Trigger: GGCAGTTTCTGTGTGCTGCCAGGATATTATATGGAA...CTTCATGCCAGGTGCTGAGAGAATGGGAAATTCTTCCTCCCCATTGACCTGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR TCA 90 bp AGACCCATTTGGCTGTATGGCCATGTACATCACCCCTCAATACAGACTGGCAATAGCCCAATCATCTCTTaGAAATCCAAACCAAACAGG +
Preference number: 2 (lower is better)
Translates to: RPIWLYGHVHHPSIQTGNSPIIS*KSKPNR
Trigger: CCTGTTTGGTTTGGATTTTCAAGAGATGATTGGGCT...ATTGCCAGTCTGTATTGAGGGGTGATGTACATGGCCATACAGCCAAATGGGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR TCA 90 bp CTGGAGTGCTGTCCTAAGTCTTCCCCAAACAGAGCAATGGAATTTGGAAATGTCAAGCAGAGACAGAGATaGACTCAGAAGTTAGGATGG +
Preference number: 2 (lower is better)
Translates to: LECCPKSSPNRAMEFGNVKQRQR*TQKLGW
Trigger: CCATCCTAACTTCTGAGTTCATCTCTGTCTCTGCTT...GACATTTCCAAATTCCATTGCTCTGTTTGGGGAAGACTTAGGACAGCACTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR TCA 90 bp CTTACATTCCGTTTTGTAATAAATACTTACAGGTGTCTCTATGTGAACAGACTCCCCTATGGCATGGGGTaGGCTCCATGCTCAGCCTCT +
Preference number: 2 (lower is better)
Translates to: LTFRFVINTYRCLYVNRLPYGMG*APCSAS
Trigger: AGAGGCTGAGCATGGAGCTCACCCCATGCCATAGGG...GAGTCTGTTCACATAGAGACACCTGTAAGTATTTATTACAAAACGGAATGTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR CCA 90 bp AGCATCAATATTTGCTGTGGGGGACAGGCAGTGTTCTTGGAATCCCCACACTGGGCTCTCAAGATTTCCTaGAGGCTTTTCTTAAATCAA +
Preference number: 2 (lower is better)
Translates to: SINICCGGQAVFLESPHWALKIS*RLFLNQ
Trigger: TTGATTTAAGAAAAGCCTCCAGGAAATCTTGAGAGC...CCAGTGTGGGGATTCCAAGAACACTGCCTGTCCCCCACAGCAAATATTGATGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR CCA 90 bp TATAATCAGGCTCCACTGGGAAAGTTTGAAGTCCAGGTCTCTGGGAAGTGCAGACAGAGCAATGGAATTTaGAAATGTCAAGCTCCTTGC +
Preference number: 2 (lower is better)
Translates to: YNQAPLGKFEVQVSGKCRQSNGI*KCQAPC
Trigger: GCAAGGAGCTTGACATTTCCAAATTCCATTGCTCTG...TCTGCACTTCCCAGAGACCTGGACTTCAAACTTTCCCAGTGGAGCCTGATTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR CCA 90 bp TATAATCAGGCTCCACTGGGAAAGTTTGAAGTCCAGGTCTCTGGGAAGTGCAGATCCTATGAAATGTGGTaGGAACAGAGATTAGGAAGG +
Preference number: 2 (lower is better)
Translates to: YNQAPLGKFEVQVSGKCRSYEMW*EQRLGR
Trigger: CCTTCCTAATCTCTGTTCCCACCACATTTCATAGGA...TCTGCACTTCCCAGAGACCTGGACTTCAAACTTTCCCAGTGGAGCCTGATTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR CCA 90 bp GCACAATCACATGTAAACACAACACCGGGCATCCAGACTTTGGGGGCTGATACAATCCCCAACATAAACTaGGGTCAAAATGTCCTTAAG +
Preference number: 2 (lower is better)
Translates to: AQSHVNTTPGIQTLGADTIPNIN*GQNVLK
Trigger: CTTAAGGACATTTTGACCCCAGTTTATGTTGGGGAT...TGTATCAGCCCCCAAAGTCTGGATGCCCGGTGTTGTGTTTACATGTGATTGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR TCA 90 bp CTTAAGAGGAGTGCAAGATCATTCAGAGAACACAGAGAAGCATGCTCCACTTACCTAACTCATCTCCTATaGAATGTGGTGGGAACAGAG +
Preference number: 2 (lower is better)
Translates to: LKRSARSFREHREACSTYLTHLL*NVVGTE
Trigger: CTCTGTTCCCACCACATTTCATAGGAGATGAGTTAG...GTAAGTGGAGCATGCTTCTCTGTGTTCTCTGAATGATCTTGCACTCCTCTTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR GCA 90 bp TATAATCAGGCTCCACTGGGAAAGTTTGAAGTCCAGGTCTCTGGGAAGTGCAGATCTTTCTTCTTTCTCTaGCGCTTTCCTTGTTTGTCA +
Preference number: 2 (lower is better)
Translates to: YNQAPLGKFEVQVSGKCRSFFFL*RFPCLS
Trigger: TGACAAACAAGGAAAGCGGCAGAGAAAGAAGAAAGA...TCTGCACTTCCCAGAGACCTGGACTTCAAACTTTCCCAGTGGAGCCTGATTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR GCA 90 bp GAAGCCCTGAAACATGGCGATGTGTCTGTTTACAATGAAAACACTTGGCAGCTCAAATGTCAAGCTCCTTaGAAGACAGCCGATGTGAAA +
Preference number: 2 (lower is better)
Translates to: EALKHGDVSVYNENTWQLKCQAP*KTADVK
Trigger: TTTCACATCGGCTGTCTTGCAAGGAGCTTGACATTT...GAGCTGCCAAGTGTTTTCATTGTAAACAGACACATCGCCATGTTTCAGGGCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR GCA 90 bp AGACCCATTTGGCTGTATGGCCATGTACATCACCCCTCAATACAGACTGGCAATAAAGGGTTCTGCACATaGTCTGAAAGTTTTGGAAGA +
Preference number: 2 (lower is better)
Translates to: RPIWLYGHVHHPSIQTGNKGFCT*SESFGR
Trigger: TCTTCCAAAACTTTCAGAGCATGTGCAGAACCCTTT...ATTGCCAGTCTGTATTGAGGGGTGATGTACATGGCCATACAGCCAAATGGGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR GCA 90 bp CTTAAGAGGAGTGCAAGATCATTCAGAGAACACAGAGAAGCATGCTCCACTTACCTGTTTTGGTATCCATaGCAAGCCTTGTGGAGTCAA +
Preference number: 2 (lower is better)
Translates to: LKRSARSFREHREACSTYLFWYP*QALWSQ
Trigger: TTGACTCCACAAGGCTTGGCATGGATACCAAAACAG...GTAAGTGGAGCATGCTTCTCTGTGTTCTCTGAATGATCTTGCACTCCTCTTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR CCA 90 bp GCACAATCACATGTAAACACAACACCGGGCATCCAGACTTTGGGGGCTGATACAGCTCTCAAGATTTCCTaGAGGCTTTTCTTAAATCAA +
Preference number: 2 (lower is better)
Translates to: AQSHVNTTPGIQTLGADTALKIS*RLFLNQ
Trigger: TTGATTTAAGAAAAGCCTCCAGGAAATCTTGAGAGC...TGTATCAGCCCCCAAAGTCTGGATGCCCGGTGTTGTGTTTACATGTGATTGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR CCA 90 bp GAAGCCCTGAAACATGGCGATGTGTCTGTTTACAATGAAAACACTTGGCAGCTCTTGTCATCTGTTTCCTaGAGTGCTGTCCTAAGTCTT +
Preference number: 2 (lower is better)
Translates to: EALKHGDVSVYNENTWQLLSSVS*SAVLSL
Trigger: AAGACTTAGGACAGCACTCCAGGAAACAGATGACAA...GAGCTGCCAAGTGTTTTCATTGTAAACAGACACATCGCCATGTTTCAGGGCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR CCA 90 bp CTTACATTCCGTTTTGTAATAAATACTTACAGGTGTCTCTATGTGAACAGACTCCTCTGTCGTACTGGGTaGCACAGAGGCTGGCCAAAG +
Preference number: 2 (lower is better)
Translates to: LTFRFVINTYRCLYVNRLLCRTG*HRGWPK
Trigger: CTTTGGCCAGCCTCTGTGCCACCCAGTACGACAGAG...GAGTCTGTTCACATAGAGACACCTGTAAGTATTTATTACAAAACGGAATGTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR CCA 90 bp TTTACAATGAAAACACTTGGCAGCTCAGGGGGACCTCGAAGAGCAAGCAAGTCTATCCCCAACATAAACTaGGGTCAAAATGTCCTTAAG +
Preference number: 2 (lower is better)
Translates to: FTMKTLGSSGGPRRASKSIPNIN*GQNVLK
Trigger: CTTAAGGACATTTTGACCCCAGTTTATGTTGGGGAT...AGACTTGCTTGCTCTTCGAGGTCCCCCTGAGCTGCCAAGTGTTTTCATTGTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR CCA 90 bp CTTACATTCCGTTTTGTAATAAATACTTACAGGTGTCTCTATGTGAACAGACTCAGCCCAAGTTTGGGGTaGCCCAGACCTGATGGTAGG +
Preference number: 2 (lower is better)
Translates to: LTFRFVINTYRCLYVNRLSPSLG*PRPDGR
Trigger: CCTACCATCAGGTCTGGGCCACCCCAAACTTGGGCT...GAGTCTGTTCACATAGAGACACCTGTAAGTATTTATTACAAAACGGAATGTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR TCA 90 bp TATAATCAGGCTCCACTGGGAAAGTTTGAAGTCCAGGTCTCTGGGAAGTGCAGACCATTTCCTCATCAGTaGAATCAGAATAATAAACGC +
Preference number: 2 (lower is better)
Translates to: YNQAPLGKFEVQVSGKCRPFPHQ*NQNNKR
Trigger: GCGTTTATTATTCTGATTTCACTGATGAGGAAATGG...TCTGCACTTCCCAGAGACCTGGACTTCAAACTTTCCCAGTGGAGCCTGATTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR GCA 90 bp AGACCCATTTGGCTGTATGGCCATGTACATCACCCCTCAATACAGACTGGCAATTTTCTTAACTTTGTTTaGAAACCTACACGCCTCTTC +
Preference number: 2 (lower is better)
Translates to: RPIWLYGHVHHPSIQTGNFLNFV*KPTRLF
Trigger: GAAGAGGCGTGTAGGTTTGCAAACAAAGTTAAGAAA...ATTGCCAGTCTGTATTGAGGGGTGATGTACATGGCCATACAGCCAAATGGGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR GCA 90 bp CTTAAGAGGAGTGCAAGATCATTCAGAGAACACAGAGAAGCATGCTCCACTTACTGCCTCCTCAAAGCTTaGTTAGTTCACAGTCAGAAT +
Preference number: 2 (lower is better)
Translates to: LKRSARSFREHREACSTYCLLKA*LVHSQN
Trigger: ATTCTGACTGTGAACTAAGCAAGCTTTGAGGAGGCA...GTAAGTGGAGCATGCTTCTCTGTGTTCTCTGAATGATCTTGCACTCCTCTTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR GCA 90 bp CTTACATTCCGTTTTGTAATAAATACTTACAGGTGTCTCTATGTGAACAGACTCTGGCACAATGTGCAGTaGCTATGGCCAAGCAGAGCC +
Preference number: 2 (lower is better)
Translates to: LTFRFVINTYRCLYVNRLWHNVQ*LWPSRA
Trigger: GGCTCTGCTTGGCCATAGGCACTGCACATTGTGCCA...GAGTCTGTTCACATAGAGACACCTGTAAGTATTTATTACAAAACGGAATGTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR GCA 90 bp GCACAATCACATGTAAACACAACACCGGGCATCCAGACTTTGGGGGCTGATACATTTTTCATCCAACTGTaGTATCAAGCACTTGAGATT +
Preference number: 2 (lower is better)
Translates to: AQSHVNTTPGIQTLGADTFFIQL*YQALEI
Trigger: AATCTCAAGTGCTTGATAGCACAGTTGGATGAAAAA...TGTATCAGCCCCCAAAGTCTGGATGCCCGGTGTTGTGTTTACATGTGATTGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR CCA 90 bp CTTAAGAGGAGTGCAAGATCATTCAGAGAACACAGAGAAGCATGCTCCACTTACCAGAGCAATGGAATTTaGAAATGTCAAGCTCCTTGC +
Preference number: 2 (lower is better)
Translates to: LKRSARSFREHREACSTYQSNGI*KCQAPC
Trigger: GCAAGGAGCTTGACATTTCCAAATTCCATTGCTCTG...GTAAGTGGAGCATGCTTCTCTGTGTTCTCTGAATGATCTTGCACTCCTCTTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR TCA 90 bp CTTAAGAGGAGTGCAAGATCATTCAGAGAACACAGAGAAGCATGCTCCACTTACCCATTTCCTCATCAGTaGAATCAGAATAATAAACGC +
Preference number: 2 (lower is better)
Translates to: LKRSARSFREHREACSTYPFPHQ*NQNNKR
Trigger: GCGTTTATTATTCTGATTTCACTGATGAGGAAATGG...GTAAGTGGAGCATGCTTCTCTGTGTTCTCTGAATGATCTTGCACTCCTCTTAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR CCA 90 bp CTTACATTCCGTTTTGTAATAAATACTTACAGGTGTCTCTATGTGAACAGACTCTGGGACTCAGGTCAATaGGGAGGAAGAATTTCCCAT +
Preference number: 2 (lower is better)
Translates to: LTFRFVINTYRCLYVNRLWDSGQ*GGRISH
Trigger: ATGGGAAATTCTTCCTCCCCATTGACCTGAGTCCCA...GAGTCTGTTCACATAGAGACACCTGTAAGTATTTATTACAAAACGGAATGTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR CCA 90 bp CTTACATTCCGTTTTGTAATAAATACTTACAGGTGTCTCTATGTGAACAGACTCAAGAATTTAGTGCCCTaGCTTGGCAGGAAATTTCCC +
Preference number: 2 (lower is better)
Translates to: LTFRFVINTYRCLYVNRLKNLVP*LGRKFP
Trigger: GGGAAATTTCCTGCCAAGCCAGGGCACTAAATTCTT...GAGTCTGTTCACATAGAGACACCTGTAAGTATTTATTACAAAACGGAATGTAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR GCA 90 bp CTTACATTCCGTTTTGTAATAAATACTTACAGGTGTCTCTATGTGAACAGACTCTATAGTTTGGAGCTGTaGTTCTGGTGGAACACAATA +
Preference number: 2 (lower is better)
Translates to: LTFRFVINTYRCLYVNRLYSLEL*FWWNTI
Trigger: TATTGTGTTCCACCAGAAGCACAGCTCCAAACTATA...GAGTCTGTTCACATAGAGACACCTGTAAGTATTTATTACAAAACGGAATGTAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR TCA 72 bp AACAGAGGCAACCTGGTGCCACGGAGGTCTGGATGCTaGTCGAGAGCAAGCAGAGGCGTGCGCGGGGGAGGA +
Preference number: 3 (lower is better)
Translates to: NRGNLVPRRSGC*SRASRGVRGGG
Trigger: TCCTCCCCCGCGCACGCCTCTGCTTGCTCTCGATCAGCATCCAGACCTCCGTGGCACCAGGTTGCCTCTGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR GCA 72 bp CCAGAGGACTGCACCCAGAAGGGCTCCACCACTGCCTaGTCTCCCAACGAAAGCCTGAGGAGGGCCAAGGCA +
Preference number: 3 (lower is better)
Translates to: PEDCTQKGSTTA*SPNESLRRAKA
Trigger: TGCCTTGGCCCTCCTCAGGCTTTCGTTGGGAGAGCAGGCAGTGGTGGAGCCCTTCTGGGTGCAGTCCTCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR CCA 72 bp AGCCCCAGAGGGCCAGTTCCCACTCCTCTGTCGTACTaGGTGGCACAGAGGCTGGCCAAAGCCACTGATTTC +
Preference number: 3 (lower is better)
Translates to: SPRGPVPTPLSY*VAQRLAKATDF
Trigger: GAAATCAGTGGCTTTGGCCAGCCTCTGTGCCACCCAGTACGACAGAGGAGTGGGAACTGGCCCTCTGGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR GCA 72 bp CTAGAGGAGGTGATGAGCAGGTGGCACAATGTGCAGTaGCTATGGCCAAGCAGAGCCCCAGAGGGCCAGTTC +
Preference number: 3 (lower is better)
Translates to: LEEVMSRWHNVQ*LWPSRAPEGQF
Trigger: GAACTGGCCCTCTGGGGCTCTGCTTGGCCATAGGCACTGCACATTGTGCCACCTGCTCATCACCTCCTCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR CCA 72 bp CCAGAGGGCCAGTTCCCACTCCTCTGTCGTACTGGGTaGCACAGAGGCTGGCCAAAGCCACTGATTTCTTCC +
Preference number: 3 (lower is better)
Translates to: PEGQFPLLCRTG*HRGWPKPLISS
Trigger: GGAAGAAATCAGTGGCTTTGGCCAGCCTCTGTGCCACCCAGTACGACAGAGGAGTGGGAACTGGCCCTCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR CCA 72 bp GAAGACGTCAAACGTTACAGCCAGATACCAGTCTGCTaGGAAGAGCCGGCACGAGCACGGCACACTGCCACC +
Preference number: 3 (lower is better)
Translates to: EDVKRYSQIPVC*EEPARARHTAT
Trigger: GGTGGCAGTGTGCCGTGCTCGTGCCGGCTCTTCCCAGCAGACTGGTATCTGGCTGTAACGTTTGACGTCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR CAA 90 bp AGCATCAATATTTGCTGTGGGGGACAGGCAGTGTTCTTGGAATCCCCACACTGGCACACACAGAGCAGGTaGGAGGGCAGCGGCAGCAGG +
Preference number: 3 (lower is better)
Translates to: SINICCGGQAVFLESPHWHTQSR*EGSGSR
Trigger: CCTGCTGCCGCTGCCCTCCAACCTGCTCTGTGTGTG...CCAGTGTGGGGATTCCAAGAACACTGCCTGTCCCCCACAGCAAATATTGATGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR TCA 72 bp ACAGAGCAGGTTGGAGGGCAGCGGCAGCAGGACAGCTaGAATCGGGTGCCCATGCTTACCACTGTTTCACAG +
Preference number: 3 (lower is better)
Translates to: TEQVGGQRQQDS*NRVPMLTTVSQ
Trigger: CTGTGAAACAGTGGTAAGCATGGGCACCCGATTTCAGCTGTCCTGCTGCCGCTGCCCTCCAACCTGCTCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR GCA 72 bp CTCATACATGAGTTCCAAAGAGCAACCCCAGAGGACTaGACCCAGAAGGGCTCCACCACTGCCTGCTCTCCC +
Preference number: 3 (lower is better)
Translates to: LIHEFQRATPED*TQKGSTTACSP
Trigger: GGGAGAGCAGGCAGTGGTGGAGCCCTTCTGGGTGCAGTCCTCTGGGGTTGCTCTTTGGAACTCATGTATGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR CCA 72 bp CACTCTAACCTATGTCTAAGGGAGGCAGCCCAAGTTTaGGGTGGCCCAGACCTGATGGTAGGGGCTGGCAGA +
Preference number: 3 (lower is better)
Translates to: HSNLCLREAAQV*GGPDLMVGAGR
Trigger: TCTGCCAGCCCCTACCATCAGGTCTGGGCCACCCCAAACTTGGGCTGCCTCCCTTAGACATAGGTTAGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR TCA 72 bp CTGACACCTGATTGGGGCAATCAGGTGTCTGGGGCATaGAGACGAGGCTTCGGGAGAAACAGCTGGGTCTCT +
Preference number: 3 (lower is better)
Translates to: LTPDWGNQVSGA*RRGFGRNSWVS
Trigger: AGAGACCCAGCTGTTTCTCCCGAAGCCTCGTCTTCATGCCCCAGACACCTGATTGCCCCAATCAGGTGTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR GCA 72 bp TATGAAGACGTCAAACGTTACAGCCAGATACCAGTCTaGTGGGAAGAGCCGGCACGAGCACGGCACACTGCC +
Preference number: 3 (lower is better)
Translates to: YEDVKRYSQIPV*WEEPARARHTA
Trigger: GGCAGTGTGCCGTGCTCGTGCCGGCTCTTCCCAGCAGACTGGTATCTGGCTGTAACGTTTGACGTCTTCATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR TCA 72 bp AATGAGGTTCGCAGCTGCAACCCAGCTATGCAAAGGTaGAGCAGCCAGGAAGTCGGCACGTGGCTTTGTCCT +
Preference number: 3 (lower is better)
Translates to: NEVRSCNPAMQR*SSQEVGTWLCP
Trigger: AGGACAAAGCCACGTGCCGACTTCCTGGCTGCTTCACCTTTGCATAGCTGGGTTGCAGCTGCGAACCTCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR GCA 72 bp TTTCATATTCCCCTCGCCCTCGATGCTTCTTCTCACTaGCACACTCACACTCACGGGACACCCCATGGTTGG +
Preference number: 3 (lower is better)
Translates to: FHIPLALDASSH*HTHTHGTPHGW
Trigger: CCAACCATGGGGTGTCCCGTGAGTGTGAGTGTGGCAGTGAGAAGAAGCATCGAGGGCGAGGGGAATATGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR CCA 72 bp ATGCTCAGTGTGAGACTAGAGGAGGTGATGAGCAGGTaGCACAATGTGCAGTGCCTATGGCCAAGCAGAGCC +
Preference number: 3 (lower is better)
Translates to: MLSVRLEEVMSR*HNVQCLWPSRA
Trigger: GGCTCTGCTTGGCCATAGGCACTGCACATTGTGCCACCTGCTCATCACCTCCTCTAGTCTCACACTGAGCAT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR CAA 90 bp CCAAGCAGAGCCCCAGAGGGCCAGTTCCCACTCCTCTGTCGTACTGGGTGGCACTCCTATTTCTTAACTTaGTTTGCAAACCTACACGCC +
Preference number: 3 (lower is better)
Translates to: PSRAPEGQFPLLCRTGWHSYFLT*FANLHA
Trigger: GGCGTGTAGGTTTGCAAACAAAGTTAAGAAATAGGA...GTGCCACCCAGTACGACAGAGGAGTGGGAACTGGCCCTCTGGGGCTCTGCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR GCA 72 bp GGTGAAGACCAACTTTCATATTCCCCTCGCCCTCGATaGTTCTTCTCACTGCCACACTCACACTCACGGGAC +
Preference number: 3 (lower is better)
Translates to: GEDQLSYSPRPR*FFSLPHSHSRD
Trigger: GTCCCGTGAGTGTGAGTGTGGCAGTGAGAAGAAGCATCGAGGGCGAGGGGAATATGAAAGTTGGTCTTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR CCA 72 bp GTGCGCACCCAGGTGAGAACAAACAAGAGTAATGACTaGCTGCTCTGCACGGGGCATTCTGAACACCTCCTT +
Preference number: 3 (lower is better)
Translates to: VRTQVRTNKSND*LLCTGHSEHLL
Trigger: AAGGAGGTGTTCAGAATGCCCCGTGCAGAGCAGCCAGTCATTACTCTTGTTTGTTCTCACCTGGGTGCGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR CCA 72 bp CCGCAGCCTCACCTGAAGTCTGTGTCCCTAAGTCTCTaGGACTCAGGTCAATGGGGAGGAAGAATTTCCCAT +
Preference number: 3 (lower is better)
Translates to: PQPHLKSVSLSL*DSGQWGGRISH
Trigger: ATGGGAAATTCTTCCTCCCCATTGACCTGAGTCCCAGAGACTTAGGGACACAGACTTCAGGTGAGGCTGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR CCA 72 bp TGTGGGGGACAGGCAGTGTTCTTGGAATCCCCACACTaGTACACAGACCCATTTGGCTGTATGGCCATGTAC +
Preference number: 3 (lower is better)
Translates to: CGGQAVFLESPH*YTDPFGCMAMY
Trigger: GTACATGGCCATACAGCCAAATGGGTCTGTGTACCAGTGTGGGGATTCCAAGAACACTGCCTGTCCCCCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR TCA 72 bp ACTCACACTCACGGGACACCCCATGGTTGGCACAGGTaGCACTGCATTATGCCAAGACAGGCTCTCAAGATT +
Preference number: 3 (lower is better)
Translates to: THTHGTPHGWHR*HCIMPRQALKI
Trigger: AATCTTGAGAGCCTGTCTTGGCATAATGCAGTGTCACCTGTGCCAACCATGGGGTGTCCCGTGAGTGTGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR GCA 72 bp GGACACCCCATGGTTGGCACAGGTGACACTGCATTATaGCAAGACAGGCTCTCAAGATTTCCTGGAGGCTTT +
Preference number: 3 (lower is better)
Translates to: GHPMVGTGDTAL*QDRLSRFPGGF
Trigger: AAAGCCTCCAGGAAATCTTGAGAGCCTGTCTTGGCATAATGCAGTGTCACCTGTGCCAACCATGGGGTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR GCA 72 bp ACATCACAGACAGGCATAGAGACTGCCAAGATGCAGTaGCGCATGTTAGAGGCTGTACAGCCAGGGTCTATG +
Preference number: 3 (lower is better)
Translates to: TSQTGIETAKMQ*RMLEAVQPGSM
Trigger: CATAGACCCTGGCTGTACAGCCTCTAACATGCGGCACTGCATCTTGGCAGTCTCTATGCCTGTCTGTGATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR GCA 72 bp TTGGAGGGCAGCGGCAGCAGGACAGCTGAAATCGGGTaGCCATGCTTACCACTGTTTCACAGAATTTTACAC +
Preference number: 3 (lower is better)
Translates to: LEGSGSRTAEIG*PCLPLFHRILH
Trigger: GTGTAAAATTCTGTGAAACAGTGGTAAGCATGGGCACCCGATTTCAGCTGTCCTGCTGCCGCTGCCCTCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR CAA 90 bp ACTCAGGTCAATGGGGAGGAAGAATTTCCCATTCTCTCAGCACCTGGCATGAAGAGTCGGCACGTGGCTTaGTCCTACTGGTCACTATCA +
Preference number: 3 (lower is better)
Translates to: TQVNGEEEFPILSAPGMKSRHVA*SYWSLS
Trigger: TGATAGTGACCAGTAGGACAAAGCCACGTGCCGACT...CTTCATGCCAGGTGCTGAGAGAATGGGAAATTCTTCCTCCCCATTGACCTGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR CAA 90 bp CAAACGTTACAGCCAGATACCAGTCTGCTGGGAAGAGCCGGCACGAGCACGGCAACAACTGTCTGTAAATaGTCATCTGTTTCCTGGAGT +
Preference number: 3 (lower is better)
Translates to: QTLQPDTSLLGRAGTSTATTVCK*SSVSWS
Trigger: ACTCCAGGAAACAGATGACAATTTACAGACAGTTGT...TGCCGTGCTCGTGCCGGCTCTTCCCAGCAGACTGGTATCTGGCTGTAACGTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR TCA 72 bp CTGCCTCCTCAAAGCTTGCTTAGTTCACAGTCAGAATaGGGTTCGCAGCTGCAACCCAGCTATGCAAAGGTG +
Preference number: 3 (lower is better)
Translates to: LPPQSLLSSQSE*GSQLQPSYAKV
Trigger: CACCTTTGCATAGCTGGGTTGCAGCTGCGAACCTCATTCTGACTGTGAACTAAGCAAGCTTTGAGGAGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR TCA 72 bp CAGCACACAGAAACTGCCAGACAACGCAGTCAAGGGTaGAGCAGAACAATGCTGGAATACCTTCCCGTGAAG +
Preference number: 3 (lower is better)
Translates to: QHTETARQRSQG*SRTMLEYLPVK
Trigger: CTTCACGGGAAGGTATTCCAGCATTGTTCTGCTTCACCCTTGACTGCGTTGTCTGGCAGTTTCTGTGTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR GCA 72 bp AGGTTACAAAAGAAGTTCACAACAGAGGCAACCTGGTaGCACGGAGGTCTGGATGCTGATCGAGAGCAAGCA +
Preference number: 3 (lower is better)
Translates to: RLQKKFTTEATW*HGGLDADREQA
Trigger: TGCTTGCTCTCGATCAGCATCCAGACCTCCGTGGCACCAGGTTGCCTCTGTTGTGAACTTCTTTTGTAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR GCA 72 bp ATGCTCAGCCTCTCAGAGCTCCTCAGTTTTCCTGTCTaGACAACAGGTACTCCGATGCTCAGTGTGAGACTA +
Preference number: 3 (lower is better)
Translates to: MLSLSELLSFPV*TTGTPMLSVRL
Trigger: TAGTCTCACACTGAGCATCGGAGTACCTGTTGTGCAGACAGGAAAACTGAGGAGCTCTGAGAGGCTGAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR CCA 72 bp GGTAGGTTACAAAAGAAGTTCACAACAGAGGCAACCTaGTGCCACGGAGGTCTGGATGCTGATCGAGAGCAA +
Preference number: 3 (lower is better)
Translates to: GRLQKKFTTEAT*CHGGLDADREQ
Trigger: TTGCTCTCGATCAGCATCCAGACCTCCGTGGCACCAGGTTGCCTCTGTTGTGAACTTCTTTTGTAACCTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR CCA 72 bp AAGTCTGTGTCCCTAAGTCTCTGGGACTCAGGTCAATaGGGAGGAAGAATTTCCCATTCTCTCAGCACCTGG +
Preference number: 3 (lower is better)
Translates to: KSVSLSLWDSGQ*GGRISHSLSTW
Trigger: CCAGGTGCTGAGAGAATGGGAAATTCTTCCTCCCCATTGACCTGAGTCCCAGAGACTTAGGGACACAGACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR CCA 72 bp GCATCAATATTTGCTGTGGGGGACAGGCAGTGTTCTTaGAATCCCCACACTGGTACACAGACCCATTTGGCT +
Preference number: 3 (lower is better)
Translates to: ASIFAVGDRQCS*NPHTGTQTHLA
Trigger: AGCCAAATGGGTCTGTGTACCAGTGTGGGGATTCCAAGAACACTGCCTGTCCCCCACAGCAAATATTGATGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR CAA 90 bp AGCATCAATATTTGCTGTGGGGGACAGGCAGTGTTCTTGGAATCCCCACACTGGCTGCCTCCTCAAAGCTaGCTTAGTTCACAGTCAGAA +
Preference number: 3 (lower is better)
Translates to: SINICCGGQAVFLESPHWLPPQS*LSSQSE
Trigger: TTCTGACTGTGAACTAAGCAAGCTTTGAGGAGGCAG...CCAGTGTGGGGATTCCAAGAACACTGCCTGTCCCCCACAGCAAATATTGATGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR CAA 90 bp CAAACGTTACAGCCAGATACCAGTCTGCTGGGAAGAGCCGGCACGAGCACGGCATATTTACCACACTGTTaGCATACAGTTGACACTAGA +
Preference number: 3 (lower is better)
Translates to: QTLQPDTSLLGRAGTSTAYLPHC*HTVDTR
Trigger: TCTAGTGTCAACTGTATGCAAACAGTGTGGTAAATA...TGCCGTGCTCGTGCCGGCTCTTCCCAGCAGACTGGTATCTGGCTGTAACGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR TCA 72 bp TATCCATGCCAAGCCTTGTGGAGTCAAACTCATACATaGGTTCCAAAGAGCAACCCCAGAGGACTGCACCCA +
Preference number: 3 (lower is better)
Translates to: YPCQALWSQTHT*VPKSNPRGLHP
Trigger: TGGGTGCAGTCCTCTGGGGTTGCTCTTTGGAACTCATGTATGAGTTTGACTCCACAAGGCTTGGCATGGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR CCA 72 bp GCTTACACCTCTTGTCTTCCTTCTGTCACCTCAATTTaGGGAGGCTATAACTTCACCGGGGTTACACACCCA +
Preference number: 3 (lower is better)
Translates to: AYTSCLPSVTSI*GGYNFTGVTHP
Trigger: TGGGTGTGTAACCCCGGTGAAGTTATAGCCTCCCCAAATTGAGGTGACAGAAGGAAGACAAGAGGTGTAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR CCA 72 bp AATCCCCACACTGGTACACAGACCCATTTGGCTGTATaGCCATGTACATCACCCCTCAATACAGACTGGCAA +
Preference number: 3 (lower is better)
Translates to: NPHTGTQTHLAV*PCTSPLNTDWQ
Trigger: TTGCCAGTCTGTATTGAGGGGTGATGTACATGGCCATACAGCCAAATGGGTCTGTGTACCAGTGTGGGGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR CAA 90 bp GAAGCCCTGAAACATGGCGATGTGTCTGTTTACAATGAAAACACTTGGCAGCTCAGTCGGCACGTGGCTTaGTCCTACTGGTCACTATCA +
Preference number: 3 (lower is better)
Translates to: EALKHGDVSVYNENTWQLSRHVA*SYWSLS
Trigger: TGATAGTGACCAGTAGGACAAAGCCACGTGCCGACT...GAGCTGCCAAGTGTTTTCATTGTAAACAGACACATCGCCATGTTTCAGGGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR CAA 90 bp CTCAGTTTTCCTGTCTGCACAACAGGTACTCCGATGCTCAGTGTGAGACTAGAGGAAATGTCAAGCTCCTaGCAAGACAGCCGATGTGAA +
Preference number: 3 (lower is better)
Translates to: LSFPVCTTGTPMLSVRLEEMSSS*QDSRCE
Trigger: TTCACATCGGCTGTCTTGCAAGGAGCTTGACATTTC...CTCTAGTCTCACACTGAGCATCGGAGTACCTGTTGTGCAGACAGGAAAACTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR CAA 90 bp CGTGAAGCCAGGGCCTCTCCCCTTCATCCTGAGATAGGACCCTCAAGTTCTATACTGAGTAGCACTCTCTaGAGTGTTTCATTTAGAAGG +
Preference number: 3 (lower is better)
Translates to: REARASPLHPEIGPSSSILSSTL*SVSFRR
Trigger: CCTTCTAAATGAAACACTCAAGAGAGTGCTACTCAG...TATAGAACTTGAGGGTCCTATCTCAGGATGAAGGGGAGAGGCCCTGGCTTCACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR CAA 90 bp TATCCACTGCTTCTGAGGTCCGCAGCCTCACCTGAAGTCTGTGTCCCTAAGTCTTTTGTTGCAACTGTTTaGGTATCCATGCCAAGCCTT +
Preference number: 3 (lower is better)
Translates to: YPLLLRSAASPEVCVPKSFVATV*VSMPSL
Trigger: AAGGCTTGGCATGGATACCAAAACAGTTGCAACAAA...AGACTTAGGGACACAGACTTCAGGTGAGGCTGCGGACCTCAGAAGCAGTGGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR TCA 72 bp AAGCTTTTAATGCCCCAATCTATTATCCACTGCTTCTaGGGTCCGCAGCCTCACCTGAAGTCTGTGTCCCTA +
Preference number: 3 (lower is better)
Translates to: KLLMPQSIIHCF*GPQPHLKSVSL
Trigger: TAGGGACACAGACTTCAGGTGAGGCTGCGGACCTCAGAAGCAGTGGATAATAGATTGGGGCATTAAAAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR CCA 72 bp AAACATGGCGATGTGTCTGTTTACAATGAAAACACTTaGCAGCTCAGGGGGACCTCGAAGAGCAAGCAAGTC +
Preference number: 3 (lower is better)
Translates to: KHGDVSVYNENT*QLRGTSKSKQV
Trigger: GACTTGCTTGCTCTTCGAGGTCCCCCTGAGCTGCCAAGTGTTTTCATTGTAAACAGACACATCGCCATGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR CCA 72 bp GAGATAGGACCCTCAAGTTCTATAATCAGGCTCCACTaGGAAAGTTTGAAGTCCAGGTCTCTGGGAAGTGCA +
Preference number: 3 (lower is better)
Translates to: EIGPSSSIIRLH*ESLKSRSLGSA
Trigger: TGCACTTCCCAGAGACCTGGACTTCAAACTTTCCCAGTGGAGCCTGATTATAGAACTTGAGGGTCCTATCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR CAA 90 bp TCTGGGACTCAGGTCAATGGGGAGGAAGAATTTCCCATTCTCTCAGCACCTGGCTCCTATTTCTTAACTTaGTTTGCAAACCTACACGCC +
Preference number: 3 (lower is better)
Translates to: SGTQVNGEEEFPILSAPGSYFLT*FANLHA
Trigger: GGCGTGTAGGTTTGCAAACAAAGTTAAGAAATAGGA...GCCAGGTGCTGAGAGAATGGGAAATTCTTCCTCCCCATTGACCTGAGTCCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR CAA 90 bp AGCGATCCAGCTGACCTGGAGGTACAAAAACATCAGGACCCTGTAGGAGCATCTACAACTGTCTGTAAATaGTCATCTGTTTCCTGGAGT +
Preference number: 3 (lower is better)
Translates to: SDPADLEVQKHQDPVGASTTVCK*SSVSWS
Trigger: ACTCCAGGAAACAGATGACAATTTACAGACAGTTGT...AGATGCTCCTACAGGGTCCTGATGTTTTTGTACCTCCAGGTCAGCTGGATCGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR CAA 90 bp TCTGGGACTCAGGTCAATGGGGAGGAAGAATTTCCCATTCTCTCAGCACCTGGCTATTTACCACACTGTTaGCATACAGTTGACACTAGA +
Preference number: 3 (lower is better)
Translates to: SGTQVNGEEEFPILSAPGYLPHC*HTVDTR
Trigger: TCTAGTGTCAACTGTATGCAAACAGTGTGGTAAATA...GCCAGGTGCTGAGAGAATGGGAAATTCTTCCTCCCCATTGACCTGAGTCCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR CAA 90 bp AGACCCATTTGGCTGTATGGCCATGTACATCACCCCTCAATACAGACTGGCAATTATCCATGCCAAGCCTaGTGGAGTCAAACTCATACA +
Preference number: 3 (lower is better)
Translates to: RPIWLYGHVHHPSIQTGNYPCQA*WSQTHT
Trigger: TGTATGAGTTTGACTCCACAAGGCTTGGCATGGATA...ATTGCCAGTCTGTATTGAGGGGTGATGTACATGGCCATACAGCCAAATGGGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR TCA 72 bp GTACAAAAACATCAGGACCCTGTAGGAGCATCTCTCTaGTGGCCCGATGAGCTTCTCCTCTTTTCTAATCCA +
Preference number: 3 (lower is better)
Translates to: VQKHQDPVGASL*WPDELLLFSNP
Trigger: TGGATTAGAAAAGAGGAGAAGCTCATCGGGCCATCAGAGAGATGCTCCTACAGGGTCCTGATGTTTTTGTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR TCA 72 bp GCCATGTACATCACCCCTCAATACAGACTGGCAATATaGAGACGTCAAACGTTACAGCCAGATACCAGTCTG +
Preference number: 3 (lower is better)
Translates to: AMYITPQYRLAI*RRQTLQPDTSL
Trigger: CAGACTGGTATCTGGCTGTAACGTTTGACGTCTTCATATTGCCAGTCTGTATTGAGGGGTGATGTACATGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR GCA 72 bp CCAGTTCCATATAATATCCTGGCAGCACACAGAAACTaGCAGACAACGCAGTCAAGGGTGAAGCAGAACAAT +
Preference number: 3 (lower is better)
Translates to: PVPYNILAAHRN*QTTQSRVKQNN
Trigger: ATTGTTCTGCTTCACCCTTGACTGCGTTGTCTGGCAGTTTCTGTGTGCTGCCAGGATATTATATGGAACTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR GCA 72 bp AGGAGTGCAAGATCATTCAGAGAACACAGAGAAGCATaGTCCACTTACTCCAGCGTGGACACTGGTTTTGAA +
Preference number: 3 (lower is better)
Translates to: RSARSFREHREA*STYSSVDTGFE
Trigger: TTCAAAACCAGTGTCCACGCTGGAGTAAGTGGAGCATGCTTCTCTGTGTTCTCTGAATGATCTTGCACTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR CCA 72 bp TGGAGTGCTGTCCTAAGTCTTCCCCAAACAGAGCAATaGAATTTGGAAATGTCAAGCTCCTTGCAAGACAGC +
Preference number: 3 (lower is better)
Translates to: WSAVLSLPQTEQ*NLEMSSSLQDS
Trigger: GCTGTCTTGCAAGGAGCTTGACATTTCCAAATTCCATTGCTCTGTTTGGGGAAGACTTAGGACAGCACTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR CAA 90 bp GCACAATCACATGTAAACACAACACCGGGCATCCAGACTTTGGGGGCTGATACAGGTGAGATGAACACTTaGATCTTCTGTATGTTAGGA +
Preference number: 3 (lower is better)
Translates to: AQSHVNTTPGIQTLGADTGEMNT*IFCMLG
Trigger: TCCTAACATACAGAAGATCAAAGTGTTCATCTCACC...TGTATCAGCCCCCAAAGTCTGGATGCCCGGTGTTGTGTTTACATGTGATTGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR GCA 72 bp TTAATGCAATATGTCACAGGGACCCACGGAATCTCCTaGCTCCTCAAAGCTTGCTTAGTTCACAGTCAGAAT +
Preference number: 3 (lower is better)
Translates to: LMQYVTGTHGIS*LLKACLVHSQN
Trigger: ATTCTGACTGTGAACTAAGCAAGCTTTGAGGAGGCAGGAGATTCCGTGGGTCCCTGTGACATATTGCATTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR GCA 72 bp CCAGCATCTCTTAGATTTGTAAAGGAAGCCAGTGTCTaGAGAGCTGAATATGCAATGTCACAGCAGAGGTCT +
Preference number: 3 (lower is better)
Translates to: PASLRFVKEASV*RAEYAMSQQRS
Trigger: AGACCTCTGCTGTGACATTGCATATTCAGCTCTGCAGACACTGGCTTCCTTTACAAATCTAAGAGATGCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR CCA 72 bp ACTGAGACAACTGTCTGTAAATTGTCATCTGTTTCCTaGAGTGCTGTCCTAAGTCTTCCCCAAACAGAGCAA +
Preference number: 3 (lower is better)
Translates to: TETTVCKLSSVS*SAVLSLPQTEQ
Trigger: TTGCTCTGTTTGGGGAAGACTTAGGACAGCACTCCAGGAAACAGATGACAATTTACAGACAGTTGTCTCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR TCA 72 bp AAGAGAGTTAGCTGTCATCTCCTAACTCATCTCCTATaGAATGTGGTGGGAACAGAGATTAGGAAGGGATGT +
Preference number: 3 (lower is better)
Translates to: KRVSCHLLTHLL*NVVGTEIRKGC
Trigger: ACATCCCTTCCTAATCTCTGTTCCCACCACATTTCATAGGAGATGAGTTAGGAGATGACAGCTAACTCTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR TCA 72 bp AGGCATCTAATTAGTGAAACTCTAGCTTCAGAGACCTaGCTCCAACTTCTCCAGTTCCATATAATATCCTGG +
Preference number: 3 (lower is better)
Translates to: RHLISETLASET*LQLLQFHIISW
Trigger: CCAGGATATTATATGGAACTGGAGAAGTTGGAGTCAGGTCTCTGAAGCTAGAGTTTCACTAATTAGATGCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR CCA 72 bp ATCCACATTTGGGTTTATCTGTTTATAATCAGAGAATaGGGGTACACAGGCCCTCCCCAAGAGATACATTTT +
Preference number: 3 (lower is better)
Translates to: IHIWVYLFIIRE*GYTGPPQEIHF
Trigger: AAAATGTATCTCTTGGGGAGGGCCTGTGTACCCCCATTCTCTGATTATAAACAGATAAACCCAAATGTGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR CCA 72 bp TGTTCCAGGTTCAGAACTAATTTGTTGCAACTGTTTTaGTATCCATGCCAAGCCTTGTGGAGTCAAACTCAT +
Preference number: 3 (lower is better)
Translates to: CSRFRTNLLQLF*YPCQALWSQTH
Trigger: ATGAGTTTGACTCCACAAGGCTTGGCATGGATACCAAAACAGTTGCAACAAATTAGTTCTGAACCTGGAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR CAA 90 bp CTTACATTCCGTTTTGTAATAAATACTTACAGGTGTCTCTATGTGAACAGACTCTCTCTGCCGCTTTCCTaGTTTGTCAGTGTTCTGTAC +
Preference number: 3 (lower is better)
Translates to: LTFRFVINTYRCLYVNRLSLPLS*FVSVLY
Trigger: GTACAGAACACTGACAAACAAGGAAAGCGGCAGAGA...GAGTCTGTTCACATAGAGACACCTGTAAGTATTTATTACAAAACGGAATGTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR CAA 90 bp CTTACATTCCGTTTTGTAATAAATACTTACAGGTGTCTCTATGTGAACAGACTCCTGCCTCCTCAAAGCTaGCTTAGTTCACAGTCAGAA +
Preference number: 3 (lower is better)
Translates to: LTFRFVINTYRCLYVNRLLPPQS*LSSQSE
Trigger: TTCTGACTGTGAACTAAGCAAGCTTTGAGGAGGCAG...GAGTCTGTTCACATAGAGACACCTGTAAGTATTTATTACAAAACGGAATGTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR CAA 90 bp CTTACATTCCGTTTTGTAATAAATACTTACAGGTGTCTCTATGTGAACAGACTCGAAATGTCAAGCTCCTaGCAAGACAGCCGATGTGAA +
Preference number: 3 (lower is better)
Translates to: LTFRFVINTYRCLYVNRLEMSSS*QDSRCE
Trigger: TTCACATCGGCTGTCTTGCAAGGAGCTTGACATTTC...GAGTCTGTTCACATAGAGACACCTGTAAGTATTTATTACAAAACGGAATGTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR CAA 90 bp CTTACATTCCGTTTTGTAATAAATACTTACAGGTGTCTCTATGTGAACAGACTCTATCCATGCCAAGCCTaGTGGAGTCAAACTCATACA +
Preference number: 3 (lower is better)
Translates to: LTFRFVINTYRCLYVNRLYPCQA*WSQTHT
Trigger: TGTATGAGTTTGACTCCACAAGGCTTGGCATGGATA...GAGTCTGTTCACATAGAGACACCTGTAAGTATTTATTACAAAACGGAATGTAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR-3UTR CAA 90 bp CTTACATTCCGTTTTGTAATAAATACTTACAGGTGTCTCTATGTGAACAGACTCTTTGTTGCAACTGTTTaGGTATCCATGCCAAGCCTT +
Preference number: 3 (lower is better)
Translates to: LTFRFVINTYRCLYVNRLFVATV*VSMPSL
Trigger: AAGGCTTGGCATGGATACCAAAACAGTTGCAACAAA...GAGTCTGTTCACATAGAGACACCTGTAAGTATTTATTACAAAACGGAATGTAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp AGAGCCGGCACGAGCACGGCACACTGCCACCAAGCACAGCGACACACACACACAGGCAGCGCGGGGAAGTaGCGCCGGACAATCAACCCC +
Preference number: 4 (lower is better)
Translates to: RAGTSTAHCHQAQRHTHTGSAGK*RRTINP
Trigger: GGGGTTGATTGTCCGGCGCCACTTCCCCGCGCTGCC...TGTGTGTGTGTGTCGCTGTGCTTGGTGGCAGTGTGCCGTGCTCGTGCCGGCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp CCAAGCAGAGCCCCAGAGGGCCAGTTCCCACTCCTCTGTCGTACTGGGTGGCACCCCATACTCAGGGGGTaGCTGGTACCGCAGGACGGC +
Preference number: 4 (lower is better)
Translates to: PSRAPEGQFPLLCRTGWHPILRG*LVPQDG
Trigger: GCCGTCCTGCGGTACCAGCCACCCCCTGAGTATGGG...GTGCCACCCAGTACGACAGAGGAGTGGGAACTGGCCCTCTGGGGCTCTGCTTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp CAAACGTTACAGCCAGATACCAGTCTGCTGGGAAGAGCCGGCACGAGCACGGCAGCTGGGGAAGACGGCTaGCGGGCAGCGCGGGGAAGT +
Preference number: 4 (lower is better)
Translates to: QTLQPDTSLLGRAGTSTAAGEDG*RAARGS
Trigger: ACTTCCCCGCGCTGCCCGGCAGCCGTCTTCCCCAGC...TGCCGTGCTCGTGCCGGCTCTTCCCAGCAGACTGGTATCTGGCTGTAACGTTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp CCAAGCAGAGCCCCAGAGGGCCAGTTCCCACTCCTCTGTCGTACTGGGTGGCACCTGGCGGAAGAGGTCTaGGAGGACATGGGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: PSRAPEGQFPLLCRTGWHLAEEV*EDMGLC
Trigger: GCACAGCCCCATGTCCTCCCAGACCTCTTCCGCCAG...GTGCCACCCAGTACGACAGAGGAGTGGGAACTGGCCCTCTGGGGCTCTGCTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp AGAGCCGGCACGAGCACGGCACACTGCCACCAAGCACAGCGACACACACACACATCCTCGTTGTTCTGCTaGGGCTGCGTGGACCGGACC +
Preference number: 4 (lower is better)
Translates to: RAGTSTAHCHQAQRHTHTSSLFC*GCVDRT
Trigger: GGTCCGGTCCACGCAGCCTCAGCAGAACAACGAGGA...TGTGTGTGTGTGTCGCTGTGCTTGGTGGCAGTGTGCCGTGCTCGTGCCGGCTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp CCAAGCAGAGCCCCAGAGGGCCAGTTCCCACTCCTCTGTCGTACTGGGTGGCACTCCCCGGCGCAACTTTaGCCTCCACATGAGGCGATC +
Preference number: 4 (lower is better)
Translates to: PSRAPEGQFPLLCRTGWHSPAQL*PPHEAI
Trigger: GATCGCCTCATGTGGAGGGCAAAGTTGCGCCGGGGA...GTGCCACCCAGTACGACAGAGGAGTGGGAACTGGCCCTCTGGGGCTCTGCTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp AGAGCCGGCACGAGCACGGCACACTGCCACCAAGCACAGCGACACACACACACAAGGATGGGCTGGTCCTaGACTCCCTGTGGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: RAGTSTAHCHQAQRHTHTRMGWS*TPCGLV
Trigger: CACCAGGCCACAGGGAGTGCAGGACCAGCCCATCCT...TGTGTGTGTGTGTCGCTGTGCTTGGTGGCAGTGTGCCGTGCTCGTGCCGGCTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp GCCCTCGATGCTTCTTCTCACTGCCACACTCACACTCACGGGACACCCCATGGTCCCACCGCCCCCTGCTaGTGTTGCTGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: ALDASSHCHTHTHGTPHGPTAPC*CCCCCC
Trigger: GCAGCAGCAGCAGCAACAGCAGCAGGGGGCGGTGGG...ACCATGGGGTGTCCCGTGAGTGTGAGTGTGGCAGTGAGAAGAAGCATCGAGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp CCAAGCAGAGCCCCAGAGGGCCAGTTCCCACTCCTCTGTCGTACTGGGTGGCACGTGGGCACTGCTGGCTaGCGTAGTGGAGGCTATGGA +
Preference number: 4 (lower is better)
Translates to: PSRAPEGQFPLLCRTGWHVGTAG*RSGGYG
Trigger: TCCATAGCCTCCACTACGGCAGCCAGCAGTGCCCAC...GTGCCACCCAGTACGACAGAGGAGTGGGAACTGGCCCTCTGGGGCTCTGCTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp TTCCCCTCGCCCTCGATGCTTCTTCTCACTGCCACACTCACACTCACGGGACACGGCAGCGCGGGGAAGTaGCGCCGGACAATCAACCCC +
Preference number: 4 (lower is better)
Translates to: FPSPSMLLLTATLTLTGHGSAGK*RRTINP
Trigger: GGGGTTGATTGTCCGGCGCCACTTCCCCGCGCTGCC...GTGTCCCGTGAGTGTGAGTGTGGCAGTGAGAAGAAGCATCGAGGGCGAGGGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp AGAGCCGGCACGAGCACGGCACACTGCCACCAAGCACAGCGACACACACACACACTGCCTGTCTTGGCGTaGGCACTGCTGGCTGCCGTA +
Preference number: 4 (lower is better)
Translates to: RAGTSTAHCHQAQRHTHTLPVLA*ALLAAV
Trigger: TACGGCAGCCAGCAGTGCCCACGCCAAGACAGGCAG...TGTGTGTGTGTGTCGCTGTGCTTGGTGGCAGTGTGCCGTGCTCGTGCCGGCTCT
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp CCAAGCAGAGCCCCAGAGGGCCAGTTCCCACTCCTCTGTCGTACTGGGTGGCACCCTGTGGCCTGGTGCTaGATGGCCAGCAAGTTCATG +
Preference number: 4 (lower is better)
Translates to: PSRAPEGQFPLLCRTGWHPVAWC*MASKFM
Trigger: CATGAACTTGCTGGCCATTCAGCACCAGGCCACAGG...GTGCCACCCAGTACGACAGAGGAGTGGGAACTGGCCCTCTGGGGCTCTGCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp AGAGCCGGCACGAGCACGGCACACTGCCACCAAGCACAGCGACACACACACACAGAGCAGGGTAGGGCTTaGCCATCTCGTGGAGCATCC +
Preference number: 4 (lower is better)
Translates to: RAGTSTAHCHQAQRHTHTEQGRA*PSRGAS
Trigger: GGATGCTCCACGAGATGGTCAAGCCCTACCCTGCTC...TGTGTGTGTGTGTCGCTGTGCTTGGTGGCAGTGTGCCGTGCTCGTGCCGGCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp GCCCTCGATGCTTCTTCTCACTGCCACACTCACACTCACGGGACACCCCATGGTTTCAGGACGGGGCTGTaGGCAGGGGTCGTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: ALDASSHCHTHTHGTPHGFRTGL*AGVVLS
Trigger: GCTGAGCACGACCCCTGCTCACAGCCCCGTCCTGAA...ACCATGGGGTGTCCCGTGAGTGTGAGTGTGGCAGTGAGAAGAAGCATCGAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp CCAAGCAGAGCCCCAGAGGGCCAGTTCCCACTCCTCTGTCGTACTGGGTGGCACCCAGCTATGCAAAGGTaGAGCAGCCAGGAAGTCGGC +
Preference number: 4 (lower is better)
Translates to: PSRAPEGQFPLLCRTGWHPAMQR*SSQEVG
Trigger: GCCGACTTCCTGGCTGCTTCACCTTTGCATAGCTGG...GTGCCACCCAGTACGACAGAGGAGTGGGAACTGGCCCTCTGGGGCTCTGCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp CCAAGCAGAGCCCCAGAGGGCCAGTTCCCACTCCTCTGTCGTACTGGGTGGCACTGCCCCCTGAAGAACTaGGACTGTGCTTTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: PSRAPEGQFPLLCRTGWHCPLKN*DCALAS
Trigger: GGAGGCCAAAGCACAGTCGCAGTTCTTCAGGGGGCA...GTGCCACCCAGTACGACAGAGGAGTGGGAACTGGCCCTCTGGGGCTCTGCTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp ACTGCCAAGATGCAGTGCCGCATGTTAGAGGCTGTACAGCCAGGGTCTATGCCCTGGCCCACCGCCCCCTaGTGCTGTTGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: TAKMQCRMLEAVQPGSMPWPTAP*CCCCCC
Trigger: GCAGCAGCAGCAACAGCAGCAGGGGGCGGTGGGCCA...GGGCATAGACCCTGGCTGTACAGCCTCTAACATGCGGCACTGCATCTTGGCAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp CAAACGTTACAGCCAGATACCAGTCTGCTGGGAAGAGCCGGCACGAGCACGGCAGCATCTGGACCAAGCTaGTGGCTGGGGGAGGCGGCA +
Preference number: 4 (lower is better)
Translates to: QTLQPDTSLLGRAGTSTAASGPS*WLGEAA
Trigger: TGCCGCCTCCCCCAGCCAGCAGCTTGGTCCAGATGC...TGCCGTGCTCGTGCCGGCTCTTCCCAGCAGACTGGTATCTGGCTGTAACGTTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp CCAAGCAGAGCCCCAGAGGGCCAGTTCCCACTCCTCTGTCGTACTGGGTGGCACTCTGCTGAGGCTGCGTaGACCGGACCTGTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: PSRAPEGQFPLLCRTGWHSAEAA*TGPVSP
Trigger: TGGAGAAACAGGTCCGGTCCACGCAGCCTCAGCAGA...GTGCCACCCAGTACGACAGAGGAGTGGGAACTGGCCCTCTGGGGCTCTGCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp TTCCCCTCGCCCTCGATGCTTCTTCTCACTGCCACACTCACACTCACGGGACACAGTGCAGTGGCCCGCTaGCGGAAGAGGTCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: FPSPSMLLLTATLTLTGHSAVAR*RKRSGR
Trigger: CCTCCCAGACCTCTTCCGCCAGCGGGCCACTGCACT...GTGTCCCGTGAGTGTGAGTGTGGCAGTGAGAAGAAGCATCGAGGGCGAGGGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp CCAAGCAGAGCCCCAGAGGGCCAGTTCCCACTCCTCTGTCGTACTGGGTGGCACCCTGACACCTTCTGTTaGCCTGCACCACCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: PSRAPEGQFPLLCRTGWHPDTFC*PAPPPP
Trigger: AGGAGGAGGTGGTGCAGGCCAACAGAAGGTGTCAGG...GTGCCACCCAGTACGACAGAGGAGTGGGAACTGGCCCTCTGGGGCTCTGCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp AGAGCCGGCACGAGCACGGCACACTGCCACCAAGCACAGCGACACACACACACAAGCTGCTGCTATGGATaGAACGGAGCGGGCAGGACG +
Preference number: 4 (lower is better)
Translates to: RAGTSTAHCHQAQRHTHTSCCYG*NGAGRT
Trigger: CGTCCTGCCCGCTCCGTTCCATCCATAGCAGCAGCT...TGTGTGTGTGTGTCGCTGTGCTTGGTGGCAGTGTGCCGTGCTCGTGCCGGCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp CCAAGCAGAGCCCCAGAGGGCCAGTTCCCACTCCTCTGTCGTACTGGGTGGCACCTCTGTCGTACTGGGTaGCACAGAGGCTGGCCAAAG +
Preference number: 4 (lower is better)
Translates to: PSRAPEGQFPLLCRTGWHLCRTG*HRGWPK
Trigger: CTTTGGCCAGCCTCTGTGCCACCCAGTACGACAGAG...GTGCCACCCAGTACGACAGAGGAGTGGGAACTGGCCCTCTGGGGCTCTGCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp AGAGCCGGCACGAGCACGGCACACTGCCACCAAGCACAGCGACACACACACACAACTCCTCTGTCGTACTaGGTGGCACAGAGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: RAGTSTAHCHQAQRHTHTTPLSY*VAQRLA
Trigger: GGCCAGCCTCTGTGCCACCCAGTACGACAGAGGAGT...TGTGTGTGTGTGTCGCTGTGCTTGGTGGCAGTGTGCCGTGCTCGTGCCGGCTCT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp AGAGCCGGCACGAGCACGGCACACTGCCACCAAGCACAGCGACACACACACACAACTCTGCAGTGTCACTaGCTGCCAGCCTCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: RAGTSTAHCHQAQRHTHTTLQCH*LPASGR
Trigger: CCTCCCAGAGGCTGGCAGCCAGTGACACTGCAGAGT...TGTGTGTGTGTGTCGCTGTGCTTGGTGGCAGTGTGCCGTGCTCGTGCCGGCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp CCAAGCAGAGCCCCAGAGGGCCAGTTCCCACTCCTCTGTCGTACTGGGTGGCACCAGATACCAGTCTGCTaGGAAGAGCCGGCACGAGCA +
Preference number: 4 (lower is better)
Translates to: PSRAPEGQFPLLCRTGWHQIPVC*EEPARA
Trigger: TGCTCGTGCCGGCTCTTCCCAGCAGACTGGTATCTG...GTGCCACCCAGTACGACAGAGGAGTGGGAACTGGCCCTCTGGGGCTCTGCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR CAA 72 bp GCCACCAAGCACAGCGACACACACACACAGAGCAGGTaGGAGGGCAGCGGCAGCAGGACAGCTGAAATCGGG +
Preference number: 4 (lower is better)
Translates to: ATKHSDTHTQSR*EGSGSRTAEIG
Trigger: CCCGATTTCAGCTGTCCTGCTGCCGCTGCCCTCCAACCTGCTCTGTGTGTGTGTGTCGCTGTGCTTGGTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp TTCCCCTCGCCCTCGATGCTTCTTCTCACTGCCACACTCACACTCACGGGACACTGTGCAGCAAGCTGCTaGCCCGGCCTCTGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: FPSPSMLLLTATLTLTGHCAASC*PGLCGQ
Trigger: CTGACCACAGAGGCCGGGTCAGCAGCTTGCTGCACA...GTGTCCCGTGAGTGTGAGTGTGGCAGTGAGAAGAAGCATCGAGGGCGAGGGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp CAAACGTTACAGCCAGATACCAGTCTGCTGGGAAGAGCCGGCACGAGCACGGCATGTGCAGCAAGCTGCTaGCCCGGCCTCTGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: QTLQPDTSLLGRAGTSTACAASC*PGLCGQ
Trigger: CTGACCACAGAGGCCGGGTCAGCAGCTTGCTGCACA...TGCCGTGCTCGTGCCGGCTCTTCCCAGCAGACTGGTATCTGGCTGTAACGTTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp ACTGCCAAGATGCAGTGCCGCATGTTAGAGGCTGTACAGCCAGGGTCTATGCCCCTCCCAACGAAAGCCTaGGGAGGGCCAAGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: TAKMQCRMLEAVQPGSMPLPTKA*GGPRQP
Trigger: GGGCTGCCTTGGCCCTCCTCAGGCTTTCGTTGGGAG...GGGCATAGACCCTGGCTGTACAGCCTCTAACATGCGGCACTGCATCTTGGCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp CAAACGTTACAGCCAGATACCAGTCTGCTGGGAAGAGCCGGCACGAGCACGGCATGGGAAGGGAGGCCATaGTGGGCCAGAAGAGCTCGG +
Preference number: 4 (lower is better)
Translates to: QTLQPDTSLLGRAGTSTAWEGRP*WARRAR
Trigger: CCGAGCTCTTCTGGCCCAGCATGGCCTCCCTTCCCA...TGCCGTGCTCGTGCCGGCTCTTCCCAGCAGACTGGTATCTGGCTGTAACGTTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp CAAACGTTACAGCCAGATACCAGTCTGCTGGGAAGAGCCGGCACGAGCACGGCAGAGCAAGCAGAGGCGTaGGCGGGGGAGGAAAGAGTG +
Preference number: 4 (lower is better)
Translates to: QTLQPDTSLLGRAGTSTAEQAEA*AGEERV
Trigger: CACTCTTTCCTCCCCCGCGCACGCCTCTGCTTGCTC...TGCCGTGCTCGTGCCGGCTCTTCCCAGCAGACTGGTATCTGGCTGTAACGTTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp CCAAGCAGAGCCCCAGAGGGCCAGTTCCCACTCCTCTGTCGTACTGGGTGGCACGCAGGTGGCACAATGTaGAGTGCCTATGGCCAAGCA +
Preference number: 4 (lower is better)
Translates to: PSRAPEGQFPLLCRTGWHAGGTM*SAYGQA
Trigger: TGCTTGGCCATAGGCACTGCACATTGTGCCACCTGC...GTGCCACCCAGTACGACAGAGGAGTGGGAACTGGCCCTCTGGGGCTCTGCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp AGAGCCGGCACGAGCACGGCACACTGCCACCAAGCACAGCGACACACACACACAAGCCAGATACCAGTCTaGTGGGAAGAGCCGGCACGA +
Preference number: 4 (lower is better)
Translates to: RAGTSTAHCHQAQRHTHTSQIPV*WEEPAR
Trigger: TCGTGCCGGCTCTTCCCAGCAGACTGGTATCTGGCT...TGTGTGTGTGTGTCGCTGTGCTTGGTGGCAGTGTGCCGTGCTCGTGCCGGCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp GCCCTCGATGCTTCTTCTCACTGCCACACTCACACTCACGGGACACCCCATGGTCCCGACAACCGCTGCTaGGTCCTAGAGCTTCTCGCG +
Preference number: 4 (lower is better)
Translates to: ALDASSHCHTHTHGTPHGPDNRC*VLELLA
Trigger: CGCGAGAAGCTCTAGGACCCAGCAGCGGTTGTCGGG...ACCATGGGGTGTCCCGTGAGTGTGAGTGTGGCAGTGAGAAGAAGCATCGAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp TTCCCCTCGCCCTCGATGCTTCTTCTCACTGCCACACTCACACTCACGGGACACGCGCCTGTCCACTGTTaGCACGGTTCACAGTGGGCC +
Preference number: 4 (lower is better)
Translates to: FPSPSMLLLTATLTLTGHAPVHC*HGSQWA
Trigger: GGCCCACTGTGAACCGTGCCAACAGTGGACAGGCGC...GTGTCCCGTGAGTGTGAGTGTGGCAGTGAGAAGAAGCATCGAGGGCGAGGGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp CAAACGTTACAGCCAGATACCAGTCTGCTGGGAAGAGCCGGCACGAGCACGGCAGGCTTGACCATCTCGTaGAGCATCCCGGGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: QTLQPDTSLLGRAGTSTAGLTIS*SIPGCW
Trigger: CCAGCACCCCGGGATGCTCCACGAGATGGTCAAGCC...TGCCGTGCTCGTGCCGGCTCTTCCCAGCAGACTGGTATCTGGCTGTAACGTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp TCACCTCAATTTGGGGAGGCTATAACTTCACCGGGGTTACACACCCAAGACCAGGGCAGGCGGGGGCTGTaGAGCACCCAGGGCCATCGG +
Preference number: 4 (lower is better)
Translates to: SPQFGEAITSPGLHTQDQGRRGL*STQGHR
Trigger: CCGATGGCCCTGGGTGCTCCACAGCCCCCGCCTGCC...CTGGTCTTGGGTGTGTAACCCCGGTGAAGTTATAGCCTCCCCAAATTGAGGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp CCAAGCAGAGCCCCAGAGGGCCAGTTCCCACTCCTCTGTCGTACTGGGTGGCACTCAGGCGACTTCCCATaGCCAGGAGAGTTCTCCAGT +
Preference number: 4 (lower is better)
Translates to: PSRAPEGQFPLLCRTGWHSGDFP*PGEFSS
Trigger: ACTGGAGAACTCTCCTGGCCATGGGAAGTCGCCTGA...GTGCCACCCAGTACGACAGAGGAGTGGGAACTGGCCCTCTGGGGCTCTGCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp CCAAGCAGAGCCCCAGAGGGCCAGTTCCCACTCCTCTGTCGTACTGGGTGGCACTCTTCCCACACCCTATaGCATGGGGTGAGCTCCATG +
Preference number: 4 (lower is better)
Translates to: PSRAPEGQFPLLCRTGWHSSHTL*HGVSSM
Trigger: CATGGAGCTCACCCCATGCCATAGGGTGTGGGAAGA...GTGCCACCCAGTACGACAGAGGAGTGGGAACTGGCCCTCTGGGGCTCTGCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp TTCCCCTCGCCCTCGATGCTTCTTCTCACTGCCACACTCACACTCACGGGACACCCTTTCCCCCATGGATaGGGCCTCCTGTGCCCTCTT +
Preference number: 4 (lower is better)
Translates to: FPSPSMLLLTATLTLTGHPFPHG*GLLCPL
Trigger: AAGAGGGCACAGGAGGCCTCATCCATGGGGGAAAGG...GTGTCCCGTGAGTGTGAGTGTGGCAGTGAGAAGAAGCATCGAGGGCGAGGGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp CCAAGCAGAGCCCCAGAGGGCCAGTTCCCACTCCTCTGTCGTACTGGGTGGCACGGGTGCGCACCCAGGTaGGAACAAACAAGAGTAATG +
Preference number: 4 (lower is better)
Translates to: PSRAPEGQFPLLCRTGWHGCAPR*EQTRVM
Trigger: CATTACTCTTGTTTGTTCTCACCTGGGTGCGCACCC...GTGCCACCCAGTACGACAGAGGAGTGGGAACTGGCCCTCTGGGGCTCTGCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp ACTGCCAAGATGCAGTGCCGCATGTTAGAGGCTGTACAGCCAGGGTCTATGCCCGAGCGGACGTGGCCCTaGTTCAGTTCCTTCAGCGCC +
Preference number: 4 (lower is better)
Translates to: TAKMQCRMLEAVQPGSMPERTWP*FSSFSA
Trigger: GGCGCTGAAGGAACTGAAGCAGGGCCACGTCCGCTC...GGGCATAGACCCTGGCTGTACAGCCTCTAACATGCGGCACTGCATCTTGGCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp GCCCTCGATGCTTCTTCTCACTGCCACACTCACACTCACGGGACACCCCATGGTTGCTGCTGTCCTTGCTaGCTGTCTTGGCGTGGGCAC +
Preference number: 4 (lower is better)
Translates to: ALDASSHCHTHTHGTPHGCCCPC*LSWRGH
Trigger: GTGCCCACGCCAAGACAGGCAGCAAGGACAGCAGCA...ACCATGGGGTGTCCCGTGAGTGTGAGTGTGGCAGTGAGAAGAAGCATCGAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp ACTGCCAAGATGCAGTGCCGCATGTTAGAGGCTGTACAGCCAGGGTCTATGCCCTGGGAAGGGAGGCCATaGTGGGCCAGAAGAGCTCGG +
Preference number: 4 (lower is better)
Translates to: TAKMQCRMLEAVQPGSMPWEGRP*WARRAR
Trigger: CCGAGCTCTTCTGGCCCAGCATGGCCTCCCTTCCCA...GGGCATAGACCCTGGCTGTACAGCCTCTAACATGCGGCACTGCATCTTGGCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp TCACCTCAATTTGGGGAGGCTATAACTTCACCGGGGTTACACACCCAAGACCAGTGTGAGCAGGGGTCGTaGTCAGCCGGCCGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: SPQFGEAITSPGLHTQDQCEQGS*SAGRGW
Trigger: CCAGCCGCGGCCGGCTGAGCACGACCCCTGCTCACA...CTGGTCTTGGGTGTGTAACCCCGGTGAAGTTATAGCCTCCCCAAATTGAGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp AGCGATCCAGCTGACCTGGAGGTACAAAAACATCAGGACCCTGTAGGAGCATCTTGTGAGCAGGGGTCGTaGTCAGCCGGCCGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: SDPADLEVQKHQDPVGASCEQGS*SAGRGW
Trigger: CCAGCCGCGGCCGGCTGAGCACGACCCCTGCTCACA...AGATGCTCCTACAGGGTCCTGATGTTTTTGTACCTCCAGGTCAGCTGGATCGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp CCAAGCAGAGCCCCAGAGGGCCAGTTCCCACTCCTCTGTCGTACTGGGTGGCACGATGCTTCTTCTCACTaGCACACTCACACTCACGGG +
Preference number: 4 (lower is better)
Translates to: PSRAPEGQFPLLCRTGWHDASSH*HTHTHG
Trigger: CCCGTGAGTGTGAGTGTGGCAGTGAGAAGAAGCATC...GTGCCACCCAGTACGACAGAGGAGTGGGAACTGGCCCTCTGGGGCTCTGCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp CCAAGCAGAGCCCCAGAGGGCCAGTTCCCACTCCTCTGTCGTACTGGGTGGCACGCAGCACACAGAAACTaGCAGACAACGCAGTCAAGG +
Preference number: 4 (lower is better)
Translates to: PSRAPEGQFPLLCRTGWHAAHRN*QTTQSR
Trigger: CCTTGACTGCGTTGTCTGGCAGTTTCTGTGTGCTGC...GTGCCACCCAGTACGACAGAGGAGTGGGAACTGGCCCTCTGGGGCTCTGCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp TCTGGGACTCAGGTCAATGGGGAGGAAGAATTTCCCATTCTCTCAGCACCTGGCTCTGGACCAAGCTGCTaGCTGGGGGAGGCGGCAGGC +
Preference number: 4 (lower is better)
Translates to: SGTQVNGEEEFPILSAPGSGPSC*LGEAAG
Trigger: GCCTGCCGCCTCCCCCAGCCAGCAGCTTGGTCCAGA...GCCAGGTGCTGAGAGAATGGGAAATTCTTCCTCCCCATTGACCTGAGTCCCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp AGAGCCGGCACGAGCACGGCACACTGCCACCAAGCACAGCGACACACACACACAAATCGCAAAGGCATCTaGACCAAGCTGCTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: RAGTSTAHCHQAQRHTHTNRKGI*TKLLAG
Trigger: CCCAGCCAGCAGCTTGGTCCAGATGCCTTTGCGATT...TGTGTGTGTGTGTCGCTGTGCTTGGTGGCAGTGTGCCGTGCTCGTGCCGGCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp CAAACGTTACAGCCAGATACCAGTCTGCTGGGAAGAGCCGGCACGAGCACGGCAGCAGAGGCATGCTCATaGTGCTCCTTCCCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: QTLQPDTSLLGRAGTSTAAEACS*CSFPSS
Trigger: GCTGCTGGGGAAGGAGCACCATGAGCATGCCTCTGC...TGCCGTGCTCGTGCCGGCTCTTCCCAGCAGACTGGTATCTGGCTGTAACGTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp TTCCCCTCGCCCTCGATGCTTCTTCTCACTGCCACACTCACACTCACGGGACACGCAGAGGCATGCTCATaGTGCTCCTTCCCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: FPSPSMLLLTATLTLTGHAEACS*CSFPSS
Trigger: GCTGCTGGGGAAGGAGCACCATGAGCATGCCTCTGC...GTGTCCCGTGAGTGTGAGTGTGGCAGTGAGAAGAAGCATCGAGGGCGAGGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp ACTGCCAAGATGCAGTGCCGCATGTTAGAGGCTGTACAGCCAGGGTCTATGCCCGAAGGGAGGCCATGCTaGGCCAGAAGAGCTCGGCAC +
Preference number: 4 (lower is better)
Translates to: TAKMQCRMLEAVQPGSMPEGRPC*ARRARH
Trigger: GTGCCGAGCTCTTCTGGCCCAGCATGGCCTCCCTTC...GGGCATAGACCCTGGCTGTACAGCCTCTAACATGCGGCACTGCATCTTGGCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp CCAAGCAGAGCCCCAGAGGGCCAGTTCCCACTCCTCTGTCGTACTGGGTGGCACGAGGTGATGAGCAGGTaGCACAATGTGCAGTGCCTA +
Preference number: 4 (lower is better)
Translates to: PSRAPEGQFPLLCRTGWHEVMSR*HNVQCL
Trigger: TAGGCACTGCACATTGTGCCACCTGCTCATCACCTC...GTGCCACCCAGTACGACAGAGGAGTGGGAACTGGCCCTCTGGGGCTCTGCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp TTCCCCTCGCCCTCGATGCTTCTTCTCACTGCCACACTCACACTCACGGGACACGAGGCAGCCCAAGTTTaGGGTGGCCCAGACCTGATG +
Preference number: 4 (lower is better)
Translates to: FPSPSMLLLTATLTLTGHEAAQV*GGPDLM
Trigger: CATCAGGTCTGGGCCACCCCAAACTTGGGCTGCCTC...GTGTCCCGTGAGTGTGAGTGTGGCAGTGAGAAGAAGCATCGAGGGCGAGGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp CAAACGTTACAGCCAGATACCAGTCTGCTGGGAAGAGCCGGCACGAGCACGGCAACTCTGCAGTGTCACTaGCTGCCAGCCTCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: QTLQPDTSLLGRAGTSTATLQCH*LPASGR
Trigger: CCTCCCAGAGGCTGGCAGCCAGTGACACTGCAGAGT...TGCCGTGCTCGTGCCGGCTCTTCCCAGCAGACTGGTATCTGGCTGTAACGTTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp CCAAGCAGAGCCCCAGAGGGCCAGTTCCCACTCCTCTGTCGTACTGGGTGGCACGTGTCCCTAAGTCTCTaGGACTCAGGTCAATGGGGA +
Preference number: 4 (lower is better)
Translates to: PSRAPEGQFPLLCRTGWHVSLSL*DSGQWG
Trigger: TCCCCATTGACCTGAGTCCCAGAGACTTAGGGACAC...GTGCCACCCAGTACGACAGAGGAGTGGGAACTGGCCCTCTGGGGCTCTGCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp TTCCCCTCGCCCTCGATGCTTCTTCTCACTGCCACACTCACACTCACGGGACACTCCACCTGGTGTTCTTaGCCCTGCGGTTCTTGGCGT +
Preference number: 4 (lower is better)
Translates to: FPSPSMLLLTATLTLTGHSTWCS*PCGSWR
Trigger: ACGCCAAGAACCGCAGGGTCAAGAACACCAGGTGGA...GTGTCCCGTGAGTGTGAGTGTGGCAGTGAGAAGAAGCATCGAGGGCGAGGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp CCAAGCAGAGCCCCAGAGGGCCAGTTCCCACTCCTCTGTCGTACTGGGTGGCACTCATTTGCTTGGTCTTaGAGGGGTACTCAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: PSRAPEGQFPLLCRTGWHSFAWS*RGTQVE
Trigger: CTCCACCTGAGTACCCCTTCAAGACCAAGCAAATGA...GTGCCACCCAGTACGACAGAGGAGTGGGAACTGGCCCTCTGGGGCTCTGCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp AGAGCCGGCACGAGCACGGCACACTGCCACCAAGCACAGCGACACACACACACAAGCAAGTCTGACACCTaGTTGGGGCAATCAGGTGTC +
Preference number: 4 (lower is better)
Translates to: RAGTSTAHCHQAQRHTHTSKSDT*LGQSGV
Trigger: GACACCTGATTGCCCCAATCAGGTGTCAGACTTGCT...TGTGTGTGTGTGTCGCTGTGCTTGGTGGCAGTGTGCCGTGCTCGTGCCGGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp CCAAGCAGAGCCCCAGAGGGCCAGTTCCCACTCCTCTGTCGTACTGGGTGGCACAAGAGCAAGCAAGTCTaGCACCTGATTGGGGCAATC +
Preference number: 4 (lower is better)
Translates to: PSRAPEGQFPLLCRTGWHKSKQV*HLIGAI
Trigger: GATTGCCCCAATCAGGTGTCAGACTTGCTTGCTCTT...GTGCCACCCAGTACGACAGAGGAGTGGGAACTGGCCCTCTGGGGCTCTGCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp AGAGCCGGCACGAGCACGGCACACTGCCACCAAGCACAGCGACACACACACACAGGGTGCGCACCCAGGTaGGAACAAACAAGAGTAATG +
Preference number: 4 (lower is better)
Translates to: RAGTSTAHCHQAQRHTHTGCAPR*EQTRVM
Trigger: CATTACTCTTGTTTGTTCTCACCTGGGTGCGCACCC...TGTGTGTGTGTGTCGCTGTGCTTGGTGGCAGTGTGCCGTGCTCGTGCCGGCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp GCCCTCGATGCTTCTTCTCACTGCCACACTCACACTCACGGGACACCCCATGGTCTGACTGGTGCCCCCTaGCATGTAGTAACCATGGCC +
Preference number: 4 (lower is better)
Translates to: ALDASSHCHTHTHGTPHGLTGAP*HVVTMA
Trigger: GGCCATGGTTACTACATGGCAGGGGGCACCAGTCAG...ACCATGGGGTGTCCCGTGAGTGTGAGTGTGGCAGTGAGAAGAAGCATCGAGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp CGTGAAGCCAGGGCCTCTCCCCTTCATCCTGAGATAGGACCCTCAAGTTCTATAGGCAGGGAGACAGAGTaGAGTGGCCCGCTGGCGGAA +
Preference number: 4 (lower is better)
Translates to: REARASPLHPEIGPSSSIGRETE*SGPLAE
Trigger: TTCCGCCAGCGGGCCACTGCACTCTGTCTCCCTGCC...TATAGAACTTGAGGGTCCTATCTCAGGATGAAGGGGAGAGGCCCTGGCTTCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp GCCCTCGATGCTTCTTCTCACTGCCACACTCACACTCACGGGACACCCCATGGTGTTCTCCAGTTTCTCTaGGGTCCCTTTGGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: ALDASSHCHTHTHGTPHGVLQFL*GPFGRW
Trigger: CCAGCGGCCAAAGGGACCGCAGAGAAACTGGAGAAC...ACCATGGGGTGTCCCGTGAGTGTGAGTGTGGCAGTGAGAAGAAGCATCGAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp TTCCCCTCGCCCTCGATGCTTCTTCTCACTGCCACACTCACACTCACGGGACACTCCCCTCGCCCTCGATaGTTCTTCTCACTGCCACAC +
Preference number: 4 (lower is better)
Translates to: FPSPSMLLLTATLTLTGHSPRPR*FFSLPH
Trigger: GTGTGGCAGTGAGAAGAAGCATCGAGGGCGAGGGGA...GTGTCCCGTGAGTGTGAGTGTGGCAGTGAGAAGAAGCATCGAGGGCGAGGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp CAAACGTTACAGCCAGATACCAGTCTGCTGGGAAGAGCCGGCACGAGCACGGCAACAGAGGCAACCTGGTaGCACGGAGGTCTGGATGCT +
Preference number: 4 (lower is better)
Translates to: QTLQPDTSLLGRAGTSTATEATW*HGGLDA
Trigger: AGCATCCAGACCTCCGTGGCACCAGGTTGCCTCTGT...TGCCGTGCTCGTGCCGGCTCTTCCCAGCAGACTGGTATCTGGCTGTAACGTTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp CCAAGCAGAGCCCCAGAGGGCCAGTTCCCACTCCTCTGTCGTACTGGGTGGCACACTGCCAAGATGCAGTaGCGCATGTTAGAGGCTGTA +
Preference number: 4 (lower is better)
Translates to: PSRAPEGQFPLLCRTGWHTAKMQ*RMLEAV
Trigger: TACAGCCTCTAACATGCGGCACTGCATCTTGGCAGT...GTGCCACCCAGTACGACAGAGGAGTGGGAACTGGCCCTCTGGGGCTCTGCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp AGCGATCCAGCTGACCTGGAGGTACAAAAACATCAGGACCCTGTAGGAGCATCTTCTGGACCAAGCTGCTaGCTGGGGGAGGCGGCAGGC +
Preference number: 4 (lower is better)
Translates to: SDPADLEVQKHQDPVGASSGPSC*LGEAAG
Trigger: GCCTGCCGCCTCCCCCAGCCAGCAGCTTGGTCCAGA...AGATGCTCCTACAGGGTCCTGATGTTTTTGTACCTCCAGGTCAGCTGGATCGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp TTCCCCTCGCCCTCGATGCTTCTTCTCACTGCCACACTCACACTCACGGGACACCCTGACACCTTCTGTTaGCCTGCACCACCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: FPSPSMLLLTATLTLTGHPDTFC*PAPPPP
Trigger: AGGAGGAGGTGGTGCAGGCCAACAGAAGGTGTCAGG...GTGTCCCGTGAGTGTGAGTGTGGCAGTGAGAAGAAGCATCGAGGGCGAGGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp CAAACGTTACAGCCAGATACCAGTCTGCTGGGAAGAGCCGGCACGAGCACGGCATCACGGGACACCCCATaGTTGGCACAGGTGACACTG +
Preference number: 4 (lower is better)
Translates to: QTLQPDTSLLGRAGTSTASRDTP*LAQVTL
Trigger: CAGTGTCACCTGTGCCAACCATGGGGTGTCCCGTGA...TGCCGTGCTCGTGCCGGCTCTTCCCAGCAGACTGGTATCTGGCTGTAACGTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp GCCCTCGATGCTTCTTCTCACTGCCACACTCACACTCACGGGACACCCCATGGTGCTCCTGGGTCTTGCTaGCTGGGGACATCATTTGCT +
Preference number: 4 (lower is better)
Translates to: ALDASSHCHTHTHGTPHGAPGSC*LGTSFA
Trigger: AGCAAATGATGTCCCCAGTCAGCAAGACCCAGGAGC...ACCATGGGGTGTCCCGTGAGTGTGAGTGTGGCAGTGAGAAGAAGCATCGAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp CAAACGTTACAGCCAGATACCAGTCTGCTGGGAAGAGCCGGCACGAGCACGGCAGTAGGAGCATCTCTCTaGTGGCCCGATGAGCTTCTC +
Preference number: 4 (lower is better)
Translates to: QTLQPDTSLLGRAGTSTAVGASL*WPDELL
Trigger: GAGAAGCTCATCGGGCCATCAGAGAGATGCTCCTAC...TGCCGTGCTCGTGCCGGCTCTTCCCAGCAGACTGGTATCTGGCTGTAACGTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp GCCCTCGATGCTTCTTCTCACTGCCACACTCACACTCACGGGACACCCCATGGTATTATCCACTGCTTCTaGGGTCCGCAGCCTCACCTG +
Preference number: 4 (lower is better)
Translates to: ALDASSHCHTHTHGTPHGIIHCF*GPQPHL
Trigger: CAGGTGAGGCTGCGGACCTCAGAAGCAGTGGATAAT...ACCATGGGGTGTCCCGTGAGTGTGAGTGTGGCAGTGAGAAGAAGCATCGAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp CAAACGTTACAGCCAGATACCAGTCTGCTGGGAAGAGCCGGCACGAGCACGGCAATGGGGCTGTGCTGCTaGATGGTTGATGGGAACGGA +
Preference number: 4 (lower is better)
Translates to: QTLQPDTSLLGRAGTSTAMGLCC*MVDGNG
Trigger: TCCGTTCCCATCAACCATGCAGCAGCACAGCCCCAT...TGCCGTGCTCGTGCCGGCTCTTCCCAGCAGACTGGTATCTGGCTGTAACGTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp GCCCTCGATGCTTCTTCTCACTGCCACACTCACACTCACGGGACACCCCATGGTGACATGGGGCTGTGCTaGTGCATGGTTGATGGGAAC +
Preference number: 4 (lower is better)
Translates to: ALDASSHCHTHTHGTPHGDMGLC*CMVDGN
Trigger: GTTCCCATCAACCATGCAGCAGCACAGCCCCATGTC...ACCATGGGGTGTCCCGTGAGTGTGAGTGTGGCAGTGAGAAGAAGCATCGAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp TCACCTCAATTTGGGGAGGCTATAACTTCACCGGGGTTACACACCCAAGACCAGGCATCTGGACCAAGCTaGTGGCTGGGGGAGGCGGCA +
Preference number: 4 (lower is better)
Translates to: SPQFGEAITSPGLHTQDQASGPS*WLGEAA
Trigger: TGCCGCCTCCCCCAGCCAGCAGCTTGGTCCAGATGC...CTGGTCTTGGGTGTGTAACCCCGGTGAAGTTATAGCCTCCCCAAATTGAGGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp TTCCCCTCGCCCTCGATGCTTCTTCTCACTGCCACACTCACACTCACGGGACACCTGCTGGGTTCTCAGTaGATCCAGCTCTCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: FPSPSMLLLTATLTLTGHLLGSQ*IQLSLQ
Trigger: CTGGAGAGAGAGCTGGATGCACTGAGAACCCAGCAG...GTGTCCCGTGAGTGTGAGTGTGGCAGTGAGAAGAAGCATCGAGGGCGAGGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp ACTGCCAAGATGCAGTGCCGCATGTTAGAGGCTGTACAGCCAGGGTCTATGCCCTCCCCTCGCCCTCGATaGTTCTTCTCACTGCCACAC +
Preference number: 4 (lower is better)
Translates to: TAKMQCRMLEAVQPGSMPSPRPR*FFSLPH
Trigger: GTGTGGCAGTGAGAAGAAGCATCGAGGGCGAGGGGA...GGGCATAGACCCTGGCTGTACAGCCTCTAACATGCGGCACTGCATCTTGGCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp AGAGCCGGCACGAGCACGGCACACTGCCACCAAGCACAGCGACACACACACACAACCCACGGAATCTCCTaGCTCCTCAAAGCTTGCTTA +
Preference number: 4 (lower is better)
Translates to: RAGTSTAHCHQAQRHTHTTHGIS*LLKACL
Trigger: TAAGCAAGCTTTGAGGAGGCAGGAGATTCCGTGGGT...TGTGTGTGTGTGTCGCTGTGCTTGGTGGCAGTGTGCCGTGCTCGTGCCGGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp TATCCACTGCTTCTGAGGTCCGCAGCCTCACCTGAAGTCTGTGTCCCTAAGTCTGAGCAAGCAGAGGCGTaGGCGGGGGAGGAAAGAGTG +
Preference number: 4 (lower is better)
Translates to: YPLLLRSAASPEVCVPKSEQAEA*AGEERV
Trigger: CACTCTTTCCTCCCCCGCGCACGCCTCTGCTTGCTC...AGACTTAGGGACACAGACTTCAGGTGAGGCTGCGGACCTCAGAAGCAGTGGATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp CAAACGTTACAGCCAGATACCAGTCTGCTGGGAAGAGCCGGCACGAGCACGGCATGGCACAATGTGCAGTaGCTATGGCCAAGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: QTLQPDTSLLGRAGTSTAWHNVQ*LWPSRA
Trigger: GGCTCTGCTTGGCCATAGGCACTGCACATTGTGCCA...TGCCGTGCTCGTGCCGGCTCTTCCCAGCAGACTGGTATCTGGCTGTAACGTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp TTCCCCTCGCCCTCGATGCTTCTTCTCACTGCCACACTCACACTCACGGGACACGCAGGTGGCACAATGTaGAGTGCCTATGGCCAAGCA +
Preference number: 4 (lower is better)
Translates to: FPSPSMLLLTATLTLTGHAGGTM*SAYGQA
Trigger: TGCTTGGCCATAGGCACTGCACATTGTGCCACCTGC...GTGTCCCGTGAGTGTGAGTGTGGCAGTGAGAAGAAGCATCGAGGGCGAGGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp CAAACGTTACAGCCAGATACCAGTCTGCTGGGAAGAGCCGGCACGAGCACGGCATTCGGGACTTCTGACTaGTGCCCCCTGCCATGTAGT +
Preference number: 4 (lower is better)
Translates to: QTLQPDTSLLGRAGTSTAFGTSD*CPLPCS
Trigger: ACTACATGGCAGGGGGCACCAGTCAGAAGTCCCGAA...TGCCGTGCTCGTGCCGGCTCTTCCCAGCAGACTGGTATCTGGCTGTAACGTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp TATCCACTGCTTCTGAGGTCCGCAGCCTCACCTGAAGTCTGTGTCCCTAAGTCTGAAGGGGTACTCAGGTaGAGGACCCCGAGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: YPLLLRSAASPEVCVPKSEGVLR*RTPRVQ
Trigger: CTGGACCCTCGGGGTCCTCCACCTGAGTACCCCTTC...AGACTTAGGGACACAGACTTCAGGTGAGGCTGCGGACCTCAGAAGCAGTGGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp GCCCTCGATGCTTCTTCTCACTGCCACACTCACACTCACGGGACACCCCATGGTAAAAGTCCGTGCTCCTaGGTCTTGCTGACTGGGGAC +
Preference number: 4 (lower is better)
Translates to: ALDASSHCHTHTHGTPHGKSPCS*VLLTGD
Trigger: GTCCCCAGTCAGCAAGACCCAGGAGCACGGACTTTT...ACCATGGGGTGTCCCGTGAGTGTGAGTGTGGCAGTGAGAAGAAGCATCGAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp TCACCTCAATTTGGGGAGGCTATAACTTCACCGGGGTTACACACCCAAGACCAGCCCATACTCAGGGGGTaGCTGGTACCGCAGGACGGC +
Preference number: 4 (lower is better)
Translates to: SPQFGEAITSPGLHTQDQPILRG*LVPQDG
Trigger: GCCGTCCTGCGGTACCAGCCACCCCCTGAGTATGGG...CTGGTCTTGGGTGTGTAACCCCGGTGAAGTTATAGCCTCCCCAAATTGAGGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp AGAGCCGGCACGAGCACGGCACACTGCCACCAAGCACAGCGACACACACACACATTCCGGCATGTTGGCTaGCTGGCCATTTCCATGTTT +
Preference number: 4 (lower is better)
Translates to: RAGTSTAHCHQAQRHTHTFRHVG*LAISMF
Trigger: AAACATGGAAATGGCCAGCCAGCCAACATGCCGGAA...TGTGTGTGTGTGTCGCTGTGCTTGGTGGCAGTGTGCCGTGCTCGTGCCGGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp TCTGGGACTCAGGTCAATGGGGAGGAAGAATTTCCCATTCTCTCAGCACCTGGCGGGCAGGACGTAGGCTaGAGGAGTCTGTCTTCCCGG +
Preference number: 4 (lower is better)
Translates to: SGTQVNGEEEFPILSAPGGQDVG*RSLSSR
Trigger: CCGGGAAGACAGACTCCTCCAGCCTACGTCCTGCCC...GCCAGGTGCTGAGAGAATGGGAAATTCTTCCTCCCCATTGACCTGAGTCCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp TTTACAATGAAAACACTTGGCAGCTCAGGGGGACCTCGAAGAGCAAGCAAGTCTTCAGCCGGCCGCGGCTaGGAAGGGAGGCCATGCTGG +
Preference number: 4 (lower is better)
Translates to: FTMKTLGSSGGPRRASKSSAGRG*EGRPCW
Trigger: CCAGCATGGCCTCCCTTCCCAGCCGCGGCCGGCTGA...AGACTTGCTTGCTCTTCGAGGTCCCCCTGAGCTGCCAAGTGTTTTCATTGTAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp CGTGAAGCCAGGGCCTCTCCCCTTCATCCTGAGATAGGACCCTCAAGTTCTATATGGAATACCTTCCCGTaGAGCCAGGGCCTCTCCCCT +
Preference number: 4 (lower is better)
Translates to: REARASPLHPEIGPSSSIWNTFP*SQGLSP
Trigger: AGGGGAGAGGCCCTGGCTTCACGGGAAGGTATTCCA...TATAGAACTTGAGGGTCCTATCTCAGGATGAAGGGGAGAGGCCCTGGCTTCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp CAAACGTTACAGCCAGATACCAGTCTGCTGGGAAGAGCCGGCACGAGCACGGCACCTGATGCTACTGGTTaGCTCCACCGTCAAAGCAGA +
Preference number: 4 (lower is better)
Translates to: QTLQPDTSLLGRAGTSTAPDATG*LHRQSR
Trigger: TCTGCTTTGACGGTGGAGGCAACCAGTAGCATCAGG...TGCCGTGCTCGTGCCGGCTCTTCCCAGCAGACTGGTATCTGGCTGTAACGTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433060.3
CDS-3UTR GCA 90 bp AGACCCATTTGGCTGTATGGCCATGTACATCACCCCTCAATACAGACTGGCAATCCCACCGCCCCCTGCTaGTGTTGCTGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: RPIWLYGHVHHPSIQTGNPTAPC*CCCCCC
Trigger: GCAGCAGCAGCAGCAACAGCAGCAGGGGGCGGTGGG...ATTGCCAGTCTGTATTGAGGGGTGATGTACATGGCCATACAGCCAAATGGGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp AGACCCATTTGGCTGTATGGCCATGTACATCACCCCTCAATACAGACTGGCAATTGGCCCACCGCCCCCTaGTGCTGTTGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: RPIWLYGHVHHPSIQTGNWPTAP*CCCCCC
Trigger: GCAGCAGCAGCAACAGCAGCAGGGGGCGGTGGGCCA...ATTGCCAGTCTGTATTGAGGGGTGATGTACATGGCCATACAGCCAAATGGGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp ACTGCCAAGATGCAGTGCCGCATGTTAGAGGCTGTACAGCCAGGGTCTATGCCCGGGACTTCTGACTGGTaGCCCCTGCCATGTAGTAAC +
Preference number: 4 (lower is better)
Translates to: TAKMQCRMLEAVQPGSMPGTSDW*PLPCSN
Trigger: GTTACTACATGGCAGGGGGCACCAGTCAGAAGTCCC...GGGCATAGACCCTGGCTGTACAGCCTCTAACATGCGGCACTGCATCTTGGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp TCACCTCAATTTGGGGAGGCTATAACTTCACCGGGGTTACACACCCAAGACCAGGAGCGGACGTGGCCCTaGTTCAGTTCCTTCAGCGCC +
Preference number: 4 (lower is better)
Translates to: SPQFGEAITSPGLHTQDQERTWP*FSSFSA
Trigger: GGCGCTGAAGGAACTGAAGCAGGGCCACGTCCGCTC...CTGGTCTTGGGTGTGTAACCCCGGTGAAGTTATAGCCTCCCCAAATTGAGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp ACTGCCAAGATGCAGTGCCGCATGTTAGAGGCTGTACAGCCAGGGTCTATGCCCGACATGGGGCTGTGCTaGTGCATGGTTGATGGGAAC +
Preference number: 4 (lower is better)
Translates to: TAKMQCRMLEAVQPGSMPDMGLC*CMVDGN
Trigger: GTTCCCATCAACCATGCAGCAGCACAGCCCCATGTC...GGGCATAGACCCTGGCTGTACAGCCTCTAACATGCGGCACTGCATCTTGGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp GCCCTCGATGCTTCTTCTCACTGCCACACTCACACTCACGGGACACCCCATGGTTGGGTCAGGGCCTGCTaGAGCTTCTCAACTTTCTCA +
Preference number: 4 (lower is better)
Translates to: ALDASSHCHTHTHGTPHGWVRAC*SFSTFS
Trigger: TGAGAAAGTTGAGAAGCTGCAGCAGGCCCTGACCCA...ACCATGGGGTGTCCCGTGAGTGTGAGTGTGGCAGTGAGAAGAAGCATCGAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp AGAGCCGGCACGAGCACGGCACACTGCCACCAAGCACAGCGACACACACACACACCATTTCCATGTTTCTaGTGGGTTCTCAGTGCATCC +
Preference number: 4 (lower is better)
Translates to: RAGTSTAHCHQAQRHTHTPFPCF*WVLSAS
Trigger: GGATGCACTGAGAACCCAGCAGAAACATGGAAATGG...TGTGTGTGTGTGTCGCTGTGCTTGGTGGCAGTGTGCCGTGCTCGTGCCGGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp TTCCCCTCGCCCTCGATGCTTCTTCTCACTGCCACACTCACACTCACGGGACACGTGTGTCCCAGTAGCTaGTGCTATGGATGGAACGGA +
Preference number: 4 (lower is better)
Translates to: FPSPSMLLLTATLTLTGHVCPSS*CYGWNG
Trigger: TCCGTTCCATCCATAGCAGCAGCTACTGGGACACAC...GTGTCCCGTGAGTGTGAGTGTGGCAGTGAGAAGAAGCATCGAGGGCGAGGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp GCCCTCGATGCTTCTTCTCACTGCCACACTCACACTCACGGGACACCCCATGGTCCAGCAGCAATCCTATaGTCCCCTTCCAGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: ALDASSHCHTHTHGTPHGPAAIL*SPSRSS
Trigger: AGAAGACCTGGAAGGGGAGCATAGGATTGCTGCTGG...ACCATGGGGTGTCCCGTGAGTGTGAGTGTGGCAGTGAGAAGAAGCATCGAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp TCTGGGACTCAGGTCAATGGGGAGGAAGAATTTCCCATTCTCTCAGCACCTGGCAGTGGGGCAGAGGCATaGTCATGGTGCTCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: SGTQVNGEEEFPILSAPGSGAEA*SWCSFP
Trigger: GGGGAAGGAGCACCATGAGCATGCCTCTGCCCCACT...GCCAGGTGCTGAGAGAATGGGAAATTCTTCCTCCCCATTGACCTGAGTCCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp AGCGATCCAGCTGACCTGGAGGTACAAAAACATCAGGACCCTGTAGGAGCATCTGGGAACTCGGGCTTGTaGAGCAAGCTGCTGACCCGG +
Preference number: 4 (lower is better)
Translates to: SDPADLEVQKHQDPVGASGNSGL*SKLLTR
Trigger: CCGGGTCAGCAGCTTGCTGCACAAGCCCGAGTTCCC...AGATGCTCCTACAGGGTCCTGATGTTTTTGTACCTCCAGGTCAGCTGGATCGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp TTCCCCTCGCCCTCGATGCTTCTTCTCACTGCCACACTCACACTCACGGGACACGACAGGCATAGAGACTaGCAAGATGCAGTGCCGCAT +
Preference number: 4 (lower is better)
Translates to: FPSPSMLLLTATLTLTGHDRHRD*QDAVPH
Trigger: ATGCGGCACTGCATCTTGGCAGTCTCTATGCCTGTC...GTGTCCCGTGAGTGTGAGTGTGGCAGTGAGAAGAAGCATCGAGGGCGAGGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp TCTGGGACTCAGGTCAATGGGGAGGAAGAATTTCCCATTCTCTCAGCACCTGGCTGCAGTGTCACTGGCTaGCAGCCTCTGGGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: SGTQVNGEEEFPILSAPGCSVTG*QPLGGR
Trigger: TCTGCCTCCCAGAGGCTGGCAGCCAGTGACACTGCA...GCCAGGTGCTGAGAGAATGGGAAATTCTTCCTCCCCATTGACCTGAGTCCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp TATCCACTGCTTCTGAGGTCCGCAGCCTCACCTGAAGTCTGTGTCCCTAAGTCTTGCAGTGTCACTGGCTaGCAGCCTCTGGGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: YPLLLRSAASPEVCVPKSCSVTG*QPLGGR
Trigger: TCTGCCTCCCAGAGGCTGGCAGCCAGTGACACTGCA...AGACTTAGGGACACAGACTTCAGGTGAGGCTGCGGACCTCAGAAGCAGTGGATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp TTCCCCTCGCCCTCGATGCTTCTTCTCACTGCCACACTCACACTCACGGGACACGAACATGCTGAACTCTaGAGTGTCACTGGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: FPSPSMLLLTATLTLTGHEHAEL*SVTGCQ
Trigger: CTGGCAGCCAGTGACACTGCAGAGTTCAGCATGTTC...GTGTCCCGTGAGTGTGAGTGTGGCAGTGAGAAGAAGCATCGAGGGCGAGGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp TTCCCCTCGCCCTCGATGCTTCTTCTCACTGCCACACTCACACTCACGGGACACAATGACTGGCTGCTCTaGACGGGGCATTCTGAACAC +
Preference number: 4 (lower is better)
Translates to: FPSPSMLLLTATLTLTGHNDWLL*TGHSEH
Trigger: GTGTTCAGAATGCCCCGTGCAGAGCAGCCAGTCATT...GTGTCCCGTGAGTGTGAGTGTGGCAGTGAGAAGAAGCATCGAGGGCGAGGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp CCAAGCAGAGCCCCAGAGGGCCAGTTCCCACTCCTCTGTCGTACTGGGTGGCACCTGGTAGACCATTTGTaGGTCTTCTTGAGTGAGGTT +
Preference number: 4 (lower is better)
Translates to: PSRAPEGQFPLLCRTGWHLVDHL*VFLSEV
Trigger: AACCTCACTCAAGAAGACCCACAAATGGTCTACCAG...GTGCCACCCAGTACGACAGAGGAGTGGGAACTGGCCCTCTGGGGCTCTGCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp TCACCTCAATTTGGGGAGGCTATAACTTCACCGGGGTTACACACCCAAGACCAGTGGCACGGTTCACAGTaGGCCTCCCCTCAGTTCGGG +
Preference number: 4 (lower is better)
Translates to: SPQFGEAITSPGLHTQDQWHGSQ*ASPQFG
Trigger: CCCGAACTGAGGGGAGGCCCACTGTGAACCGTGCCA...CTGGTCTTGGGTGTGTAACCCCGGTGAAGTTATAGCCTCCCCAAATTGAGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp TCACCTCAATTTGGGGAGGCTATAACTTCACCGGGGTTACACACCCAAGACCAGGCGCCTGTCCACTGTTaGCACGGTTCACAGTGGGCC +
Preference number: 4 (lower is better)
Translates to: SPQFGEAITSPGLHTQDQAPVHC*HGSQWA
Trigger: GGCCCACTGTGAACCGTGCCAACAGTGGACAGGCGC...CTGGTCTTGGGTGTGTAACCCCGGTGAAGTTATAGCCTCCCCAAATTGAGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp AGCGATCCAGCTGACCTGGAGGTACAAAAACATCAGGACCCTGTAGGAGCATCTGAAGGGGTACTCAGGTaGAGGACCCCGAGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: SDPADLEVQKHQDPVGASEGVLR*RTPRVQ
Trigger: CTGGACCCTCGGGGTCCTCCACCTGAGTACCCCTTC...AGATGCTCCTACAGGGTCCTGATGTTTTTGTACCTCCAGGTCAGCTGGATCGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp TCACCTCAATTTGGGGAGGCTATAACTTCACCGGGGTTACACACCCAAGACCAGTACTCAGGGGGTGGCTaGTACCGCAGGACGGCCACA +
Preference number: 4 (lower is better)
Translates to: SPQFGEAITSPGLHTQDQYSGGG*YRRTAT
Trigger: TGTGGCCGTCCTGCGGTACCAGCCACCCCCTGAGTA...CTGGTCTTGGGTGTGTAACCCCGGTGAAGTTATAGCCTCCCCAAATTGAGGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp AGCATCAATATTTGCTGTGGGGGACAGGCAGTGTTCTTGGAATCCCCACACTGGGGAGACAGAGTGCAGTaGCCCGCTGGCGGAAGAGGT +
Preference number: 4 (lower is better)
Translates to: SINICCGGQAVFLESPHWGDRVQ*PAGGRG
Trigger: ACCTCTTCCGCCAGCGGGCCACTGCACTCTGTCTCC...CCAGTGTGGGGATTCCAAGAACACTGCCTGTCCCCCACAGCAAATATTGATGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp CTTAAGAGGAGTGCAAGATCATTCAGAGAACACAGAGAAGCATGCTCCACTTACGGCAGGCGGGGGCTGTaGAGCACCCAGGGCCATCGG +
Preference number: 4 (lower is better)
Translates to: LKRSARSFREHREACSTYGRRGL*STQGHR
Trigger: CCGATGGCCCTGGGTGCTCCACAGCCCCCGCCTGCC...GTAAGTGGAGCATGCTTCTCTGTGTTCTCTGAATGATCTTGCACTCCTCTTAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp ACTGCCAAGATGCAGTGCCGCATGTTAGAGGCTGTACAGCCAGGGTCTATGCCCTGGCTGCGGCATTCATaGCAAAGTGTCGGATGGTGC +
Preference number: 4 (lower is better)
Translates to: TAKMQCRMLEAVQPGSMPWLRHS*QSVGWC
Trigger: GCACCATCCGACACTTTGCCATGAATGCCGCAGCCA...GGGCATAGACCCTGGCTGTACAGCCTCTAACATGCGGCACTGCATCTTGGCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp TCACCTCAATTTGGGGAGGCTATAACTTCACCGGGGTTACACACCCAAGACCAGGGGCAGGACGTAGGCTaGAGGAGTCTGTCTTCCCGG +
Preference number: 4 (lower is better)
Translates to: SPQFGEAITSPGLHTQDQGQDVG*RSLSSR
Trigger: CCGGGAAGACAGACTCCTCCAGCCTACGTCCTGCCC...CTGGTCTTGGGTGTGTAACCCCGGTGAAGTTATAGCCTCCCCAAATTGAGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp GCCCTCGATGCTTCTTCTCACTGCCACACTCACACTCACGGGACACCCCATGGTCTGGTAAGAGAGGTCTaGCGAGAGTGTGTCCCAGTA +
Preference number: 4 (lower is better)
Translates to: ALDASSHCHTHTHGTPHGLVREV*RECVPV
Trigger: TACTGGGACACACTCTCGCCAGACCTCTCTTACCAG...ACCATGGGGTGTCCCGTGAGTGTGAGTGTGGCAGTGAGAAGAAGCATCGAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp TCACCTCAATTTGGGGAGGCTATAACTTCACCGGGGTTACACACCCAAGACCAGCTGCCTGTCTTGGCGTaGGCACTGCTGGCTGCCGTA +
Preference number: 4 (lower is better)
Translates to: SPQFGEAITSPGLHTQDQLPVLA*ALLAAV
Trigger: TACGGCAGCCAGCAGTGCCCACGCCAAGACAGGCAG...CTGGTCTTGGGTGTGTAACCCCGGTGAAGTTATAGCCTCCCCAAATTGAGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp AGCATCAATATTTGCTGTGGGGGACAGGCAGTGTTCTTGGAATCCCCACACTGGGAAGGGAGGCCATGCTaGGCCAGAAGAGCTCGGCAC +
Preference number: 4 (lower is better)
Translates to: SINICCGGQAVFLESPHWEGRPC*ARRARH
Trigger: GTGCCGAGCTCTTCTGGCCCAGCATGGCCTCCCTTC...CCAGTGTGGGGATTCCAAGAACACTGCCTGTCCCCCACAGCAAATATTGATGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp TCACCTCAATTTGGGGAGGCTATAACTTCACCGGGGTTACACACCCAAGACCAGGGTCCCTTTGGCCGCTaGGTGTTTCAGGACGGGGCT +
Preference number: 4 (lower is better)
Translates to: SPQFGEAITSPGLHTQDQGPFGR*VFQDGA
Trigger: AGCCCCGTCCTGAAACACCCAGCGGCCAAAGGGACC...CTGGTCTTGGGTGTGTAACCCCGGTGAAGTTATAGCCTCCCCAAATTGAGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp AGAGCCGGCACGAGCACGGCACACTGCCACCAAGCACAGCGACACACACACACATTTATAATCAGAGAATaGGGGTACACAGGCCCTCCC +
Preference number: 4 (lower is better)
Translates to: RAGTSTAHCHQAQRHTHTFIIRE*GYTGPP
Trigger: GGGAGGGCCTGTGTACCCCCATTCTCTGATTATAAA...TGTGTGTGTGTGTCGCTGTGCTTGGTGGCAGTGTGCCGTGCTCGTGCCGGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR CAA 72 bp TCACTGCCACACTCACACTCACGGGACACCCCATGGTaGGCACAGGTGACACTGCATTATGCCAAGACAGGC +
Preference number: 4 (lower is better)
Translates to: SLPHSHSRDTPW*AQVTLHYAKTG
Trigger: GCCTGTCTTGGCATAATGCAGTGTCACCTGTGCCAACCATGGGGTGTCCCGTGAGTGTGAGTGTGGCAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp AGAGCCGGCACGAGCACGGCACACTGCCACCAAGCACAGCGACACACACACACAATTTGTGGGTCTTCTTaGGTGAGGTTTTCCGTGGAA +
Preference number: 4 (lower is better)
Translates to: RAGTSTAHCHQAQRHTHTICGSS*VRFSVE
Trigger: TTCCACGGAAAACCTCACTCAAGAAGACCCACAAAT...TGTGTGTGTGTGTCGCTGTGCTTGGTGGCAGTGTGCCGTGCTCGTGCCGGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp GCCCTCGATGCTTCTTCTCACTGCCACACTCACACTCACGGGACACCCCATGGTTCATTTGCTTGGTCTTaGAGGGGTACTCAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: ALDASSHCHTHTHGTPHGSFAWS*RGTQVE
Trigger: CTCCACCTGAGTACCCCTTCAAGACCAAGCAAATGA...ACCATGGGGTGTCCCGTGAGTGTGAGTGTGGCAGTGAGAAGAAGCATCGAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp TATCCACTGCTTCTGAGGTCCGCAGCCTCACCTGAAGTCTGTGTCCCTAAGTCTCCAGCTATGCAAAGGTaGAGCAGCCAGGAAGTCGGC +
Preference number: 4 (lower is better)
Translates to: YPLLLRSAASPEVCVPKSPAMQR*SSQEVG
Trigger: GCCGACTTCCTGGCTGCTTCACCTTTGCATAGCTGG...AGACTTAGGGACACAGACTTCAGGTGAGGCTGCGGACCTCAGAAGCAGTGGATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp AGCGATCCAGCTGACCTGGAGGTACAAAAACATCAGGACCCTGTAGGAGCATCTCAGGTGTCTGGGGCATaGAGACGAGGCTTCGGGAGA +
Preference number: 4 (lower is better)
Translates to: SDPADLEVQKHQDPVGASQVSGA*RRGFGR
Trigger: TCTCCCGAAGCCTCGTCTTCATGCCCCAGACACCTG...AGATGCTCCTACAGGGTCCTGATGTTTTTGTACCTCCAGGTCAGCTGGATCGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp TCACCTCAATTTGGGGAGGCTATAACTTCACCGGGGTTACACACCCAAGACCAGTGGAATACCTTCCCGTaGAGCCAGGGCCTCTCCCCT +
Preference number: 4 (lower is better)
Translates to: SPQFGEAITSPGLHTQDQWNTFP*SQGLSP
Trigger: AGGGGAGAGGCCCTGGCTTCACGGGAAGGTATTCCA...CTGGTCTTGGGTGTGTAACCCCGGTGAAGTTATAGCCTCCCCAAATTGAGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp GCCCTCGATGCTTCTTCTCACTGCCACACTCACACTCACGGGACACCCCATGGTGTGTATGCAGAGATGTaGACACATAGGAGGCATGGC +
Preference number: 4 (lower is better)
Translates to: ALDASSHCHTHTHGTPHGVYAEM*THRRHG
Trigger: GCCATGCCTCCTATGTGTTCACATCTCTGCATACAC...ACCATGGGGTGTCCCGTGAGTGTGAGTGTGGCAGTGAGAAGAAGCATCGAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp ACTGCCAAGATGCAGTGCCGCATGTTAGAGGCTGTACAGCCAGGGTCTATGCCCTGTTCTCGGTTGGGGTaGCATACCGCAGTTGTTCCT +
Preference number: 4 (lower is better)
Translates to: TAKMQCRMLEAVQPGSMPCSRLG*HTAVVP
Trigger: AGGAACAACTGCGGTATGGCACCCCAACCGAGAACA...GGGCATAGACCCTGGCTGTACAGCCTCTAACATGCGGCACTGCATCTTGGCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp TATCCACTGCTTCTGAGGTCCGCAGCCTCACCTGAAGTCTGTGTCCCTAAGTCTTGTTGCTGCTGCTGCTaGCCCCTGAAGAACTGCGAC +
Preference number: 4 (lower is better)
Translates to: YPLLLRSAASPEVCVPKSCCCCC*PLKNCD
Trigger: GTCGCAGTTCTTCAGGGGGCAGCAGCAGCAGCAACA...AGACTTAGGGACACAGACTTCAGGTGAGGCTGCGGACCTCAGAAGCAGTGGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp CGTGAAGCCAGGGCCTCTCCCCTTCATCCTGAGATAGGACCCTCAAGTTCTATAGAGGACATGGGGCTGTaGTGCTGCATGGTTGATGGG +
Preference number: 4 (lower is better)
Translates to: REARASPLHPEIGPSSSIEDMGL*CCMVDG
Trigger: CCCATCAACCATGCAGCAGCACAGCCCCATGTCCTC...TATAGAACTTGAGGGTCCTATCTCAGGATGAAGGGGAGAGGCCCTGGCTTCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp TCTGGGACTCAGGTCAATGGGGAGGAAGAATTTCCCATTCTCTCAGCACCTGGCGAGGACATGGGGCTGTaGTGCTGCATGGTTGATGGG +
Preference number: 4 (lower is better)
Translates to: SGTQVNGEEEFPILSAPGEDMGL*CCMVDG
Trigger: CCCATCAACCATGCAGCAGCACAGCCCCATGTCCTC...GCCAGGTGCTGAGAGAATGGGAAATTCTTCCTCCCCATTGACCTGAGTCCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp TCCCCAAACAGAGCAATGGAATTTGGAAATGTCAAGCTCCTTGCAAGACAGCCGGGCAGGGAGACAGAGTaGAGTGGCCCGCTGGCGGAA +
Preference number: 4 (lower is better)
Translates to: SPNRAMEFGNVKLLARQPGRETE*SGPLAE
Trigger: TTCCGCCAGCGGGCCACTGCACTCTGTCTCCCTGCC...CGGCTGTCTTGCAAGGAGCTTGACATTTCCAAATTCCATTGCTCTGTTTGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp GCCCTCGATGCTTCTTCTCACTGCCACACTCACACTCACGGGACACCCCATGGTAGCATAATGCCCCTCTaGAGCTTTGTCTTCATGCCC +
Preference number: 4 (lower is better)
Translates to: ALDASSHCHTHTHGTPHGSIMPL*SFVFMP
Trigger: GGGCATGAAGACAAAGCTGCAGAGGGGCATTATGCT...ACCATGGGGTGTCCCGTGAGTGTGAGTGTGGCAGTGAGAAGAAGCATCGAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp TATCCACTGCTTCTGAGGTCCGCAGCCTCACCTGAAGTCTGTGTCCCTAAGTCTTTCTCACATGCAGACTaGAGCTGGGTCAGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: YPLLLRSAASPEVCVPKSFSHAD*SWVRAC
Trigger: GCAGGCCCTGACCCAGCTGCAGTCTGCATGTGAGAA...AGACTTAGGGACACAGACTTCAGGTGAGGCTGCGGACCTCAGAAGCAGTGGATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp CGTGAAGCCAGGGCCTCTCCCCTTCATCCTGAGATAGGACCCTCAAGTTCTATACACCTTCTGTTGGCCTaGACCACCTCCTCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: REARASPLHPEIGPSSSIHLLLA*TTSSSS
Trigger: AGAGGAGGAGGAGGTGGTGCAGGCCAACAGAAGGTG...TATAGAACTTGAGGGTCCTATCTCAGGATGAAGGGGAGAGGCCCTGGCTTCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp TCACCTCAATTTGGGGAGGCTATAACTTCACCGGGGTTACACACCCAAGACCAGGTGGGCACTGCTGGCTaGCGTAGTGGAGGCTATGGA +
Preference number: 4 (lower is better)
Translates to: SPQFGEAITSPGLHTQDQVGTAG*RSGGYG
Trigger: TCCATAGCCTCCACTACGGCAGCCAGCAGTGCCCAC...CTGGTCTTGGGTGTGTAACCCCGGTGAAGTTATAGCCTCCCCAAATTGAGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp TCTGGGACTCAGGTCAATGGGGAGGAAGAATTTCCCATTCTCTCAGCACCTGGCGTTCTCCAGTTTCTCTaGGGTCCCTTTGGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: SGTQVNGEEEFPILSAPGVLQFL*GPFGRW
Trigger: CCAGCGGCCAAAGGGACCGCAGAGAAACTGGAGAAC...GCCAGGTGCTGAGAGAATGGGAAATTCTTCCTCCCCATTGACCTGAGTCCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp TCTGGGACTCAGGTCAATGGGGAGGAAGAATTTCCCATTCTCTCAGCACCTGGCACAGAGGCAACCTGGTaGCACGGAGGTCTGGATGCT +
Preference number: 4 (lower is better)
Translates to: SGTQVNGEEEFPILSAPGTEATW*HGGLDA
Trigger: AGCATCCAGACCTCCGTGGCACCAGGTTGCCTCTGT...GCCAGGTGCTGAGAGAATGGGAAATTCTTCCTCCCCATTGACCTGAGTCCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp ACTCAGGTCAATGGGGAGGAAGAATTTCCCATTCTCTCAGCACCTGGCATGAAGGGCCAAGGCAGCCCCTaGCCTGCGTGCATGGTTAGA +
Preference number: 4 (lower is better)
Translates to: TQVNGEEEFPILSAPGMKGQGSP*PACMVR
Trigger: TCTAACCATGCACGCAGGGCAGGGGCTGCCTTGGCC...CTTCATGCCAGGTGCTGAGAGAATGGGAAATTCTTCCTCCCCATTGACCTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp CTCAGTTTTCCTGTCTGCACAACAGGTACTCCGATGCTCAGTGTGAGACTAGAGGCAACCCCAGAGGACTaGACCCAGAAGGGCTCCACC +
Preference number: 4 (lower is better)
Translates to: LSFPVCTTGTPMLSVRLEATPED*TQKGST
Trigger: GGTGGAGCCCTTCTGGGTGCAGTCCTCTGGGGTTGC...CTCTAGTCTCACACTGAGCATCGGAGTACCTGTTGTGCAGACAGGAAAACTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp GCCCTCGATGCTTCTTCTCACTGCCACACTCACACTCACGGGACACCCCATGGTGAACACAGAGAAGCATaGTCCACTTACTCCAGCGTG +
Preference number: 4 (lower is better)
Translates to: ALDASSHCHTHTHGTPHGEHREA*STYSSV
Trigger: CACGCTGGAGTAAGTGGAGCATGCTTCTCTGTGTTC...ACCATGGGGTGTCCCGTGAGTGTGAGTGTGGCAGTGAGAAGAAGCATCGAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp GCCCTCGATGCTTCTTCTCACTGCCACACTCACACTCACGGGACACCCCATGGTCCTGGACAGGACTACTaGGGCTATAACAAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: ALDASSHCHTHTHGTPHGPGQDY*GYNKQK
Trigger: CTTCTGCTTGTTATAGCCCCAGTAGTCCTGTCCAGG...ACCATGGGGTGTCCCGTGAGTGTGAGTGTGGCAGTGAGAAGAAGCATCGAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433060.3
CDS-3UTR CCA 90 bp ACTGCCAAGATGCAGTGCCGCATGTTAGAGGCTGTACAGCCAGGGTCTATGCCCGTTCATGTTCTCGGTTaGGGTGCCATACCGCAGTTG +
Preference number: 4 (lower is better)
Translates to: TAKMQCRMLEAVQPGSMPVHVLG*GAIPQL
Trigger: CAACTGCGGTATGGCACCCCAACCGAGAACATGAAC...GGGCATAGACCCTGGCTGTACAGCCTCTAACATGCGGCACTGCATCTTGGCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp GCCCTCGATGCTTCTTCTCACTGCCACACTCACACTCACGGGACACCCCATGGTAAGTTGTTTGTAGGATaGGCTGGTCCTGCACTCCCT +
Preference number: 4 (lower is better)
Translates to: ALDASSHCHTHTHGTPHGKLFVG*AGPALP
Trigger: AGGGAGTGCAGGACCAGCCCATCCTACAAACAACTT...ACCATGGGGTGTCCCGTGAGTGTGAGTGTGGCAGTGAGAAGAAGCATCGAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp ACTGCCAAGATGCAGTGCCGCATGTTAGAGGCTGTACAGCCAGGGTCTATGCCCTGGCCTCCTCGTAAGTaGGCAGTTCCTCGTTGTTCT +
Preference number: 4 (lower is better)
Translates to: TAKMQCRMLEAVQPGSMPWPPRK*AVPRCS
Trigger: AGAACAACGAGGAACTGCCCACTTACGAGGAGGCCA...GGGCATAGACCCTGGCTGTACAGCCTCTAACATGCGGCACTGCATCTTGGCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp TTTACAATGAAAACACTTGGCAGCTCAGGGGGACCTCGAAGAGCAAGCAAGTCTAGTGCAGTGGCCCGCTaGCGGAAGAGGTCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: FTMKTLGSSGGPRRASKSSAVAR*RKRSGR
Trigger: CCTCCCAGACCTCTTCCGCCAGCGGGCCACTGCACT...AGACTTGCTTGCTCTTCGAGGTCCCCCTGAGCTGCCAAGTGTTTTCATTGTAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp ACTGCCAAGATGCAGTGCCGCATGTTAGAGGCTGTACAGCCAGGGTCTATGCCCGGCATGTTGGCTGGCTaGCCATTTCCATGTTTCTGC +
Preference number: 4 (lower is better)
Translates to: TAKMQCRMLEAVQPGSMPGMLAG*PFPCFC
Trigger: GCAGAAACATGGAAATGGCCAGCCAGCCAACATGCC...GGGCATAGACCCTGGCTGTACAGCCTCTAACATGCGGCACTGCATCTTGGCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp TTCCCCTCGCCCTCGATGCTTCTTCTCACTGCCACACTCACACTCACGGGACACTGTATTCCGGCATGTTaGCTGGCTGGCCATTTCCAT +
Preference number: 4 (lower is better)
Translates to: FPSPSMLLLTATLTLTGHCIPAC*LAGHFH
Trigger: ATGGAAATGGCCAGCCAGCCAACATGCCGGAATACA...GTGTCCCGTGAGTGTGAGTGTGGCAGTGAGAAGAAGCATCGAGGGCGAGGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp CTTAAGAGGAGTGCAAGATCATTCAGAGAACACAGAGAAGCATGCTCCACTTACTCAGCCGGCCGCGGCTaGGAAGGGAGGCCATGCTGG +
Preference number: 4 (lower is better)
Translates to: LKRSARSFREHREACSTYSAGRG*EGRPCW
Trigger: CCAGCATGGCCTCCCTTCCCAGCCGCGGCCGGCTGA...GTAAGTGGAGCATGCTTCTCTGTGTTCTCTGAATGATCTTGCACTCCTCTTAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp CCAAGCAGAGCCCCAGAGGGCCAGTTCCCACTCCTCTGTCGTACTGGGTGGCACGTGGCTTTGTCCTACTaGTCACTATCAAACACAGTA +
Preference number: 4 (lower is better)
Translates to: PSRAPEGQFPLLCRTGWHVALSY*SLSNTV
Trigger: TACTGTGTTTGATAGTGACCAGTAGGACAAAGCCAC...GTGCCACCCAGTACGACAGAGGAGTGGGAACTGGCCCTCTGGGGCTCTGCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp TCTGGGACTCAGGTCAATGGGGAGGAAGAATTTCCCATTCTCTCAGCACCTGGCAGCCCAAGTTTGGGGTaGCCCAGACCTGATGGTAGG +
Preference number: 4 (lower is better)
Translates to: SGTQVNGEEEFPILSAPGSPSLG*PRPDGR
Trigger: CCTACCATCAGGTCTGGGCCACCCCAAACTTGGGCT...GCCAGGTGCTGAGAGAATGGGAAATTCTTCCTCCCCATTGACCTGAGTCCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp CGTGAAGCCAGGGCCTCTCCCCTTCATCCTGAGATAGGACCCTCAAGTTCTATAAGCCCAAGTTTGGGGTaGCCCAGACCTGATGGTAGG +
Preference number: 4 (lower is better)
Translates to: REARASPLHPEIGPSSSISPSLG*PRPDGR
Trigger: CCTACCATCAGGTCTGGGCCACCCCAAACTTGGGCT...TATAGAACTTGAGGGTCCTATCTCAGGATGAAGGGGAGAGGCCCTGGCTTCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp ACTGCCAAGATGCAGTGCCGCATGTTAGAGGCTGTACAGCCAGGGTCTATGCCCCATTCTCTCAGCACCTaGCATGAAGGTGCTACAGCC +
Preference number: 4 (lower is better)
Translates to: TAKMQCRMLEAVQPGSMPHSLST*HEGATA
Trigger: GGCTGTAGCACCTTCATGCCAGGTGCTGAGAGAATG...GGGCATAGACCCTGGCTGTACAGCCTCTAACATGCGGCACTGCATCTTGGCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp CAAACGTTACAGCCAGATACCAGTCTGCTGGGAAGAGCCGGCACGAGCACGGCACGGGCATCCAGACTTTaGGGGCTGATACAAGAAAAC +
Preference number: 4 (lower is better)
Translates to: QTLQPDTSLLGRAGTSTARASRL*GLIQEN
Trigger: GTTTTCTTGTATCAGCCCCCAAAGTCTGGATGCCCG...TGCCGTGCTCGTGCCGGCTCTTCCCAGCAGACTGGTATCTGGCTGTAACGTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp TTCCCCTCGCCCTCGATGCTTCTTCTCACTGCCACACTCACACTCACGGGACACACCCATTTGGCTGTATaGCCATGTACATCACCCCTC +
Preference number: 4 (lower is better)
Translates to: FPSPSMLLLTATLTLTGHTHLAV*PCTSPL
Trigger: GAGGGGTGATGTACATGGCCATACAGCCAAATGGGT...GTGTCCCGTGAGTGTGAGTGTGGCAGTGAGAAGAAGCATCGAGGGCGAGGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp TTCCCCTCGCCCTCGATGCTTCTTCTCACTGCCACACTCACACTCACGGGACACTCTCATTTCCACCTCTaGGATCCTCAGGAAGTTTGG +
Preference number: 4 (lower is better)
Translates to: FPSPSMLLLTATLTLTGHSHFHL*DPQEVW
Trigger: CCAAACTTCCTGAGGATCTCAGAGGTGGAAATGAGA...GTGTCCCGTGAGTGTGAGTGTGGCAGTGAGAAGAAGCATCGAGGGCGAGGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp CAAACGTTACAGCCAGATACCAGTCTGCTGGGAAGAGCCGGCACGAGCACGGCAGTGGGTCTTCTTGAGTaGGGTTTTCCGTGGAAGAAA +
Preference number: 4 (lower is better)
Translates to: QTLQPDTSLLGRAGTSTAVGLLE*GFPWKK
Trigger: TTTCTTCCACGGAAAACCTCACTCAAGAAGACCCAC...TGCCGTGCTCGTGCCGGCTCTTCCCAGCAGACTGGTATCTGGCTGTAACGTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp AGCATCAATATTTGCTGTGGGGGACAGGCAGTGTTCTTGGAATCCCCACACTGGTCCACCTGGTGTTCTTaGCCCTGCGGTTCTTGGCGT +
Preference number: 4 (lower is better)
Translates to: SINICCGGQAVFLESPHWSTWCS*PCGSWR
Trigger: ACGCCAAGAACCGCAGGGTCAAGAACACCAGGTGGA...CCAGTGTGGGGATTCCAAGAACACTGCCTGTCCCCCACAGCAAATATTGATGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp CTCAGTTTTCCTGTCTGCACAACAGGTACTCCGATGCTCAGTGTGAGACTAGAGGCTGCTGCTGCCCCCTaGAGAACTGCGACTGTGCTT +
Preference number: 4 (lower is better)
Translates to: LSFPVCTTGTPMLSVRLEAAAAP*RTATVL
Trigger: AAGCACAGTCGCAGTTCTTCAGGGGGCAGCAGCAGC...CTCTAGTCTCACACTGAGCATCGGAGTACCTGTTGTGCAGACAGGAAAACTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp CTCAGTTTTCCTGTCTGCACAACAGGTACTCCGATGCTCAGTGTGAGACTAGAGGAGCAGGGTAGGGCTTaGCCATCTCGTGGAGCATCC +
Preference number: 4 (lower is better)
Translates to: LSFPVCTTGTPMLSVRLEEQGRA*PSRGAS
Trigger: GGATGCTCCACGAGATGGTCAAGCCCTACCCTGCTC...CTCTAGTCTCACACTGAGCATCGGAGTACCTGTTGTGCAGACAGGAAAACTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp GAAGCCCTGAAACATGGCGATGTGTCTGTTTACAATGAAAACACTTGGCAGCTCTTCAGGACGGGGCTGTaGGCAGGGGTCGTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: EALKHGDVSVYNENTWQLFRTGL*AGVVLS
Trigger: GCTGAGCACGACCCCTGCTCACAGCCCCGTCCTGAA...GAGCTGCCAAGTGTTTTCATTGTAAACAGACACATCGCCATGTTTCAGGGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp ACTGCCAAGATGCAGTGCCGCATGTTAGAGGCTGTACAGCCAGGGTCTATGCCCGGGATGGCAGTTAGATaGGGACTTCCATCATCTCTC +
Preference number: 4 (lower is better)
Translates to: TAKMQCRMLEAVQPGSMPGMAVR*GLPSSL
Trigger: GAGAGATGATGGAAGTCCTCATCTAACTGCCATCCC...GGGCATAGACCCTGGCTGTACAGCCTCTAACATGCGGCACTGCATCTTGGCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp ACTCAGGTCAATGGGGAGGAAGAATTTCCCATTCTCTCAGCACCTGGCATGAAGCAGGTGTCTGGGGCATaGAGACGAGGCTTCGGGAGA +
Preference number: 4 (lower is better)
Translates to: TQVNGEEEFPILSAPGMKQVSGA*RRGFGR
Trigger: TCTCCCGAAGCCTCGTCTTCATGCCCCAGACACCTG...CTTCATGCCAGGTGCTGAGAGAATGGGAAATTCTTCCTCCCCATTGACCTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp ACTCAGGTCAATGGGGAGGAAGAATTTCCCATTCTCTCAGCACCTGGCATGAAGCGGCAGCAGGACAGCTaGAATCGGGTGCCCATGCTT +
Preference number: 4 (lower is better)
Translates to: TQVNGEEEFPILSAPGMKRQQDS*NRVPML
Trigger: AAGCATGGGCACCCGATTTCAGCTGTCCTGCTGCCG...CTTCATGCCAGGTGCTGAGAGAATGGGAAATTCTTCCTCCCCATTGACCTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp CGTGAAGCCAGGGCCTCTCCCCTTCATCCTGAGATAGGACCCTCAAGTTCTATAAAACCCGACAACCGCTaGTGGGTCCTAGAGCTTCTC +
Preference number: 4 (lower is better)
Translates to: REARASPLHPEIGPSSSIKPDNR*WVLELL
Trigger: GAGAAGCTCTAGGACCCAGCAGCGGTTGTCGGGTTT...TATAGAACTTGAGGGTCCTATCTCAGGATGAAGGGGAGAGGCCCTGGCTTCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp TATAATCAGGCTCCACTGGGAAAGTTTGAAGTCCAGGTCTCTGGGAAGTGCAGAAGGATGGGCTGGTCCTaGACTCCCTGTGGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: YNQAPLGKFEVQVSGKCRRMGWS*TPCGLV
Trigger: CACCAGGCCACAGGGAGTGCAGGACCAGCCCATCCT...TCTGCACTTCCCAGAGACCTGGACTTCAAACTTTCCCAGTGGAGCCTGATTATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp TCACCTCAATTTGGGGAGGCTATAACTTCACCGGGGTTACACACCCAAGACCAGTGCCCCCTGAAGAACTaGGACTGTGCTTTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: SPQFGEAITSPGLHTQDQCPLKN*DCALAS
Trigger: GGAGGCCAAAGCACAGTCGCAGTTCTTCAGGGGGCA...CTGGTCTTGGGTGTGTAACCCCGGTGAAGTTATAGCCTCCCCAAATTGAGGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp CGTGAAGCCAGGGCCTCTCCCCTTCATCCTGAGATAGGACCCTCAAGTTCTATACTCTCCAGGGACAGCTaGATGATTCTCTCGCTGAGC +
Preference number: 4 (lower is better)
Translates to: REARASPLHPEIGPSSSILSRDS*MILSLS
Trigger: GCTCAGCGAGAGAATCATGCAGCTGTCCCTGGAGAG...TATAGAACTTGAGGGTCCTATCTCAGGATGAAGGGGAGAGGCCCTGGCTTCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp TATAATCAGGCTCCACTGGGAAAGTTTGAAGTCCAGGTCTCTGGGAAGTGCAGACCCTGGCCTGGGCGTTaGTCAAAGCCTGGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: YNQAPLGKFEVQVSGKCRPWPGR*SKPGPG
Trigger: TCCTGGACCAGGCTTTGAGCAACGCCCAGGCCAGGG...TCTGCACTTCCCAGAGACCTGGACTTCAAACTTTCCCAGTGGAGCCTGATTATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp TCCCCAAACAGAGCAATGGAATTTGGAAATGTCAAGCTCCTTGCAAGACAGCCGCCCTGGCCTGGGCGTTaGTCAAAGCCTGGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: SPNRAMEFGNVKLLARQPPWPGR*SKPGPG
Trigger: TCCTGGACCAGGCTTTGAGCAACGCCCAGGCCAGGG...CGGCTGTCTTGCAAGGAGCTTGACATTTCCAAATTCCATTGCTCTGTTTGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp CGTGAAGCCAGGGCCTCTCCCCTTCATCCTGAGATAGGACCCTCAAGTTCTATAGAGGCATGCTCATGGTaGTCCTTCCCCAGCAGCAAT +
Preference number: 4 (lower is better)
Translates to: REARASPLHPEIGPSSSIEACSW*SFPSSN
Trigger: ATTGCTGCTGGGGAAGGAGCACCATGAGCATGCCTC...TATAGAACTTGAGGGTCCTATCTCAGGATGAAGGGGAGAGGCCCTGGCTTCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp TTTACAATGAAAACACTTGGCAGCTCAGGGGGACCTCGAAGAGCAAGCAAGTCTGGGAACTCGGGCTTGTaGAGCAAGCTGCTGACCCGG +
Preference number: 4 (lower is better)
Translates to: FTMKTLGSSGGPRRASKSGNSGL*SKLLTR
Trigger: CCGGGTCAGCAGCTTGCTGCACAAGCCCGAGTTCCC...AGACTTGCTTGCTCTTCGAGGTCCCCCTGAGCTGCCAAGTGTTTTCATTGTAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp CAAACGTTACAGCCAGATACCAGTCTGCTGGGAAGAGCCGGCACGAGCACGGCACTCAGTTTTCCTGTCTaGACAACAGGTACTCCGATG +
Preference number: 4 (lower is better)
Translates to: QTLQPDTSLLGRAGTSTALSFPV*TTGTPM
Trigger: CATCGGAGTACCTGTTGTGCAGACAGGAAAACTGAG...TGCCGTGCTCGTGCCGGCTCTTCCCAGCAGACTGGTATCTGGCTGTAACGTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp AGCATCAATATTTGCTGTGGGGGACAGGCAGTGTTCTTGGAATCCCCACACTGGGAAGGGCTCCACCACTaGCTGCTCTCCCAACGAAAG +
Preference number: 4 (lower is better)
Translates to: SINICCGGQAVFLESPHWEGLHH*LLSQRK
Trigger: CTTTCGTTGGGAGAGCAGGCAGTGGTGGAGCCCTTC...CCAGTGTGGGGATTCCAAGAACACTGCCTGTCCCCCACAGCAAATATTGATGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp TCACCTCAATTTGGGGAGGCTATAACTTCACCGGGGTTACACACCCAAGACCAGAGGTGCTACAGCCACTaGATCATGAGGGTGCGCACC +
Preference number: 4 (lower is better)
Translates to: SPQFGEAITSPGLHTQDQRCYSH*IMRVRT
Trigger: GGTGCGCACCCTCATGATGCAGTGGCTGTAGCACCT...CTGGTCTTGGGTGTGTAACCCCGGTGAAGTTATAGCCTCCCCAAATTGAGGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp CAAACGTTACAGCCAGATACCAGTCTGCTGGGAAGAGCCGGCACGAGCACGGCAACACAATTCTGTAAGTaGTCATGGAGGAGGAGGCTC +
Preference number: 4 (lower is better)
Translates to: QTLQPDTSLLGRAGTSTATQFCK*SWRRRL
Trigger: GAGCCTCCTCCTCCATGAGCACTTACAGAATTGTGT...TGCCGTGCTCGTGCCGGCTCTTCCCAGCAGACTGGTATCTGGCTGTAACGTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp GCCCTCGATGCTTCTTCTCACTGCCACACTCACACTCACGGGACACCCCATGGTGAAATCGGGTGCCCATaGTTACCACTGTTTCACAGA +
Preference number: 4 (lower is better)
Translates to: ALDASSHCHTHTHGTPHGEIGCP*LPLFHR
Trigger: TCTGTGAAACAGTGGTAAGCATGGGCACCCGATTTC...ACCATGGGGTGTCCCGTGAGTGTGAGTGTGGCAGTGAGAAGAAGCATCGAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp CAAACGTTACAGCCAGATACCAGTCTGCTGGGAAGAGCCGGCACGAGCACGGCAACAGCTGAAATCGGGTaGCCATGCTTACCACTGTTT +
Preference number: 4 (lower is better)
Translates to: QTLQPDTSLLGRAGTSTATAEIG*PCLPLF
Trigger: AAACAGTGGTAAGCATGGGCACCCGATTTCAGCTGT...TGCCGTGCTCGTGCCGGCTCTTCCCAGCAGACTGGTATCTGGCTGTAACGTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp ACTGCCAAGATGCAGTGCCGCATGTTAGAGGCTGTACAGCCAGGGTCTATGCCCGAGTCTTCTAGAACCTaGACAGGACTACTGGGGCTA +
Preference number: 4 (lower is better)
Translates to: TAKMQCRMLEAVQPGSMPESSRT*TGLLGL
Trigger: TAGCCCCAGTAGTCCTGTCCAGGTTCTAGAAGACTC...GGGCATAGACCCTGGCTGTACAGCCTCTAACATGCGGCACTGCATCTTGGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433060.3
CDS-3UTR CCA 90 bp TATAATCAGGCTCCACTGGGAAAGTTTGAAGTCCAGGTCTCTGGGAAGTGCAGACCCGACAACCGCTGCTaGGTCCTAGAGCTTCTCGCG +
Preference number: 4 (lower is better)
Translates to: YNQAPLGKFEVQVSGKCRPDNRC*VLELLA
Trigger: CGCGAGAAGCTCTAGGACCCAGCAGCGGTTGTCGGG...TCTGCACTTCCCAGAGACCTGGACTTCAAACTTTCCCAGTGGAGCCTGATTATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp TTTACAATGAAAACACTTGGCAGCTCAGGGGGACCTCGAAGAGCAAGCAAGTCTTGGCACGGTTCACAGTaGGCCTCCCCTCAGTTCGGG +
Preference number: 4 (lower is better)
Translates to: FTMKTLGSSGGPRRASKSWHGSQ*ASPQFG
Trigger: CCCGAACTGAGGGGAGGCCCACTGTGAACCGTGCCA...AGACTTGCTTGCTCTTCGAGGTCCCCCTGAGCTGCCAAGTGTTTTCATTGTAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp TATAATCAGGCTCCACTGGGAAAGTTTGAAGTCCAGGTCTCTGGGAAGTGCAGAGGAGACAGAGTGCAGTaGCCCGCTGGCGGAAGAGGT +
Preference number: 4 (lower is better)
Translates to: YNQAPLGKFEVQVSGKCRGDRVQ*PAGGRG
Trigger: ACCTCTTCCGCCAGCGGGCCACTGCACTCTGTCTCC...TCTGCACTTCCCAGAGACCTGGACTTCAAACTTTCCCAGTGGAGCCTGATTATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp TTTACAATGAAAACACTTGGCAGCTCAGGGGGACCTCGAAGAGCAAGCAAGTCTCAGGGCCATCGGGAGTaGAAGCGGCAGGGAGACAGA +
Preference number: 4 (lower is better)
Translates to: FTMKTLGSSGGPRRASKSQGHRE*KRQGDR
Trigger: TCTGTCTCCCTGCCGCTTCCACTCCCGATGGCCCTG...AGACTTGCTTGCTCTTCGAGGTCCCCCTGAGCTGCCAAGTGTTTTCATTGTAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp TCCCCAAACAGAGCAATGGAATTTGGAAATGTCAAGCTCCTTGCAAGACAGCCGCAGGGCCATCGGGAGTaGAAGCGGCAGGGAGACAGA +
Preference number: 4 (lower is better)
Translates to: SPNRAMEFGNVKLLARQPQGHRE*KRQGDR
Trigger: TCTGTCTCCCTGCCGCTTCCACTCCCGATGGCCCTG...CGGCTGTCTTGCAAGGAGCTTGACATTTCCAAATTCCATTGCTCTGTTTGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp CTCAGTTTTCCTGTCTGCACAACAGGTACTCCGATGCTCAGTGTGAGACTAGAGAGCTGCTGCTATGGATaGAACGGAGCGGGCAGGACG +
Preference number: 4 (lower is better)
Translates to: LSFPVCTTGTPMLSVRLESCCYG*NGAGRT
Trigger: CGTCCTGCCCGCTCCGTTCCATCCATAGCAGCAGCT...CTCTAGTCTCACACTGAGCATCGGAGTACCTGTTGTGCAGACAGGAAAACTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp AGACCCATTTGGCTGTATGGCCATGTACATCACCCCTCAATACAGACTGGCAATGGTCCCTTTGGCCGCTaGGTGTTTCAGGACGGGGCT +
Preference number: 4 (lower is better)
Translates to: RPIWLYGHVHHPSIQTGNGPFGR*VFQDGA
Trigger: AGCCCCGTCCTGAAACACCCAGCGGCCAAAGGGACC...ATTGCCAGTCTGTATTGAGGGGTGATGTACATGGCCATACAGCCAAATGGGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp TCACCTCAATTTGGGGAGGCTATAACTTCACCGGGGTTACACACCCAAGACCAGTCTCTGCGGTCCCTTTaGCCGCTGGGTGTTTCAGGA +
Preference number: 4 (lower is better)
Translates to: SPQFGEAITSPGLHTQDQSLRSL*PLGVSG
Trigger: TCCTGAAACACCCAGCGGCCAAAGGGACCGCAGAGA...CTGGTCTTGGGTGTGTAACCCCGGTGAAGTTATAGCCTCCCCAAATTGAGGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp AGACCCATTTGGCTGTATGGCCATGTACATCACCCCTCAATACAGACTGGCAATCTGACCCGGCCTCTGTaGTCAGGCGACTTCCCATGG +
Preference number: 4 (lower is better)
Translates to: RPIWLYGHVHHPSIQTGNLTRPL*SGDFPW
Trigger: CCATGGGAAGTCGCCTGACCACAGAGGCCGGGTCAG...ATTGCCAGTCTGTATTGAGGGGTGATGTACATGGCCATACAGCCAAATGGGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp TATAATCAGGCTCCACTGGGAAAGTTTGAAGTCCAGGTCTCTGGGAAGTGCAGACTGACCCGGCCTCTGTaGTCAGGCGACTTCCCATGG +
Preference number: 4 (lower is better)
Translates to: YNQAPLGKFEVQVSGKCRLTRPL*SGDFPW
Trigger: CCATGGGAAGTCGCCTGACCACAGAGGCCGGGTCAG...TCTGCACTTCCCAGAGACCTGGACTTCAAACTTTCCCAGTGGAGCCTGATTATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp AGCATCAATATTTGCTGTGGGGGACAGGCAGTGTTCTTGGAATCCCCACACTGGGGTGCCACGGAGGTCTaGATGCTGATCGAGAGCAAG +
Preference number: 4 (lower is better)
Translates to: SINICCGGQAVFLESPHWGATEV*MLIESK
Trigger: CTTGCTCTCGATCAGCATCCAGACCTCCGTGGCACC...CCAGTGTGGGGATTCCAAGAACACTGCCTGTCCCCCACAGCAAATATTGATGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp CCAAGCAGAGCCCCAGAGGGCCAGTTCCCACTCCTCTGTCGTACTGGGTGGCACCACTGTATATACAACTaGCCTGGTAGGTTACAAAAG +
Preference number: 4 (lower is better)
Translates to: PSRAPEGQFPLLCRTGWHHCIYN*PGRLQK
Trigger: CTTTTGTAACCTACCAGGCCAGTTGTATATACAGTG...GTGCCACCCAGTACGACAGAGGAGTGGGAACTGGCCCTCTGGGGCTCTGCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp AGCATCAATATTTGCTGTGGGGGACAGGCAGTGTTCTTGGAATCCCCACACTGGCTCTGTCGTACTGGGTaGCACAGAGGCTGGCCAAAG +
Preference number: 4 (lower is better)
Translates to: SINICCGGQAVFLESPHWLCRTG*HRGWPK
Trigger: CTTTGGCCAGCCTCTGTGCCACCCAGTACGACAGAG...CCAGTGTGGGGATTCCAAGAACACTGCCTGTCCCCCACAGCAAATATTGATGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp AGCGATCCAGCTGACCTGGAGGTACAAAAACATCAGGACCCTGTAGGAGCATCTCCACACCCTATGGCATaGGGTGAGCTCCATGCTCAG +
Preference number: 4 (lower is better)
Translates to: SDPADLEVQKHQDPVGASPHPMA*GELHAQ
Trigger: CTGAGCATGGAGCTCACCCCATGCCATAGGGTGTGG...AGATGCTCCTACAGGGTCCTGATGTTTTTGTACCTCCAGGTCAGCTGGATCGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp CTCAGTTTTCCTGTCTGCACAACAGGTACTCCGATGCTCAGTGTGAGACTAGAGCAACCCTTTCCCCCATaGATGAGGCCTCCTGTGCCC +
Preference number: 4 (lower is better)
Translates to: LSFPVCTTGTPMLSVRLEQPFPP*MRPPVP
Trigger: GGGCACAGGAGGCCTCATCCATGGGGGAAAGGGTTG...CTCTAGTCTCACACTGAGCATCGGAGTACCTGTTGTGCAGACAGGAAAACTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp CTCAGTTTTCCTGTCTGCACAACAGGTACTCCGATGCTCAGTGTGAGACTAGAGGAGGCAGCCCAAGTTTaGGGTGGCCCAGACCTGATG +
Preference number: 4 (lower is better)
Translates to: LSFPVCTTGTPMLSVRLEEAAQV*GGPDLM
Trigger: CATCAGGTCTGGGCCACCCCAAACTTGGGCTGCCTC...CTCTAGTCTCACACTGAGCATCGGAGTACCTGTTGTGCAGACAGGAAAACTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp AGAGCCGGCACGAGCACGGCACACTGCCACCAAGCACAGCGACACACACACACATTCCATATAATATCCTaGCAGCACACAGAAACTGCC +
Preference number: 4 (lower is better)
Translates to: RAGTSTAHCHQAQRHTHTFHIIS*QHTETA
Trigger: GGCAGTTTCTGTGTGCTGCCAGGATATTATATGGAA...TGTGTGTGTGTGTCGCTGTGCTTGGTGGCAGTGTGCCGTGCTCGTGCCGGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp AGCATCAATATTTGCTGTGGGGGACAGGCAGTGTTCTTGGAATCCCCACACTGGCTGGCTGCCAGCCTCTaGGAGGCAGAGAAAATGCTG +
Preference number: 4 (lower is better)
Translates to: SINICCGGQAVFLESPHWLAASL*EAEKML
Trigger: CAGCATTTTCTCTGCCTCCCAGAGGCTGGCAGCCAG...CCAGTGTGGGGATTCCAAGAACACTGCCTGTCCCCCACAGCAAATATTGATGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp AGAGCCGGCACGAGCACGGCACACTGCCACCAAGCACAGCGACACACACACACATTGTTGCAACTGTTTTaGTATCCATGCCAAGCCTTG +
Preference number: 4 (lower is better)
Translates to: RAGTSTAHCHQAQRHTHTLLQLF*YPCQAL
Trigger: CAAGGCTTGGCATGGATACCAAAACAGTTGCAACAA...TGTGTGTGTGTGTCGCTGTGCTTGGTGGCAGTGTGCCGTGCTCGTGCCGGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp GCCCTCGATGCTTCTTCTCACTGCCACACTCACACTCACGGGACACCCCATGGTTGGGACTCAGGTCAATaGGGAGGAAGAATTTCCCAT +
Preference number: 4 (lower is better)
Translates to: ALDASSHCHTHTHGTPHGWDSGQ*GGRISH
Trigger: ATGGGAAATTCTTCCTCCCCATTGACCTGAGTCCCA...ACCATGGGGTGTCCCGTGAGTGTGAGTGTGGCAGTGAGAAGAAGCATCGAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp GCACAATCACATGTAAACACAACACCGGGCATCCAGACTTTGGGGGCTGATACACCTGTGGCCTGGTGCTaGATGGCCAGCAAGTTCATG +
Preference number: 4 (lower is better)
Translates to: AQSHVNTTPGIQTLGADTPVAWC*MASKFM
Trigger: CATGAACTTGCTGGCCATTCAGCACCAGGCCACAGG...TGTATCAGCCCCCAAAGTCTGGATGCCCGGTGTTGTGTTTACATGTGATTGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp CAAACGTTACAGCCAGATACCAGTCTGCTGGGAAGAGCCGGCACGAGCACGGCAGGGGTATTCCAAGGATaGTCCACATTTGGGTTTATC +
Preference number: 4 (lower is better)
Translates to: QTLQPDTSLLGRAGTSTAGVFQG*STFGFI
Trigger: GATAAACCCAAATGTGGATCATCCTTGGAATACCCC...TGCCGTGCTCGTGCCGGCTCTTCCCAGCAGACTGGTATCTGGCTGTAACGTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp CAAACGTTACAGCCAGATACCAGTCTGCTGGGAAGAGCCGGCACGAGCACGGCAAAGCAGAGACAGAGATaGACTCAGAAGTTAGGATGG +
Preference number: 4 (lower is better)
Translates to: QTLQPDTSLLGRAGTSTAKQRQR*TQKLGW
Trigger: CCATCCTAACTTCTGAGTTCATCTCTGTCTCTGCTT...TGCCGTGCTCGTGCCGGCTCTTCCCAGCAGACTGGTATCTGGCTGTAACGTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp TCTGGGACTCAGGTCAATGGGGAGGAAGAATTTCCCATTCTCTCAGCACCTGGCAGTTCACAGTCAGAATaGGGTTCGCAGCTGCAACCC +
Preference number: 4 (lower is better)
Translates to: SGTQVNGEEEFPILSAPGSSQSE*GSQLQP
Trigger: GGGTTGCAGCTGCGAACCTCATTCTGACTGTGAACT...GCCAGGTGCTGAGAGAATGGGAAATTCTTCCTCCCCATTGACCTGAGTCCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp TTTACAATGAAAACACTTGGCAGCTCAGGGGGACCTCGAAGAGCAAGCAAGTCTCGGAGGTCTGGATGCTaGTCGAGAGCAAGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: FTMKTLGSSGGPRRASKSRRSGC*SRASRG
Trigger: GCCTCTGCTTGCTCTCGATCAGCATCCAGACCTCCG...AGACTTGCTTGCTCTTCGAGGTCCCCCTGAGCTGCCAAGTGTTTTCATTGTAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp TCCCCAAACAGAGCAATGGAATTTGGAAATGTCAAGCTCCTTGCAAGACAGCCGCCCTATGGCATGGGGTaGGCTCCATGCTCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: SPNRAMEFGNVKLLARQPPYGMG*APCSAS
Trigger: AGAGGCTGAGCATGGAGCTCACCCCATGCCATAGGG...CGGCTGTCTTGCAAGGAGCTTGACATTTCCAAATTCCATTGCTCTGTTTGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp AGACCCATTTGGCTGTATGGCCATGTACATCACCCCTCAATACAGACTGGCAATCCCTATGGCATGGGGTaGGCTCCATGCTCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: RPIWLYGHVHHPSIQTGNPYGMG*APCSAS
Trigger: AGAGGCTGAGCATGGAGCTCACCCCATGCCATAGGG...ATTGCCAGTCTGTATTGAGGGGTGATGTACATGGCCATACAGCCAAATGGGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp CGTGAAGCCAGGGCCTCTCCCCTTCATCCTGAGATAGGACCCTCAAGTTCTATAATGCCGTTGAAGCCCTaGAACATGGCGATGTGTCTG +
Preference number: 4 (lower is better)
Translates to: REARASPLHPEIGPSSSIMPLKP*NMAMCL
Trigger: CAGACACATCGCCATGTTTCAGGGCTTCAACGGCAT...TATAGAACTTGAGGGTCCTATCTCAGGATGAAGGGGAGAGGCCCTGGCTTCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp CTTAAGAGGAGTGCAAGATCATTCAGAGAACACAGAGAAGCATGCTCCACTTACCTCCCAACGAAAGCCTaGGGAGGGCCAAGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: LKRSARSFREHREACSTYLPTKA*GGPRQP
Trigger: GGGCTGCCTTGGCCCTCCTCAGGCTTTCGTTGGGAG...GTAAGTGGAGCATGCTTCTCTGTGTTCTCTGAATGATCTTGCACTCCTCTTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp AGACCCATTTGGCTGTATGGCCATGTACATCACCCCTCAATACAGACTGGCAATCGGCAGCAGGACAGCTaGAATCGGGTGCCCATGCTT +
Preference number: 4 (lower is better)
Translates to: RPIWLYGHVHHPSIQTGNRQQDS*NRVPML
Trigger: AAGCATGGGCACCCGATTTCAGCTGTCCTGCTGCCG...ATTGCCAGTCTGTATTGAGGGGTGATGTACATGGCCATACAGCCAAATGGGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp AGCATCAATATTTGCTGTGGGGGACAGGCAGTGTTCTTGGAATCCCCACACTGGTCCTGGATCAGCCGCTaGAATACTGTTCCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: SINICCGGQAVFLESPHWSWISR*NTVPAA
Trigger: GGCAGCTGGAACAGTATTGCAGCGGCTGATCCAGGA...CCAGTGTGGGGATTCCAAGAACACTGCCTGTCCCCCACAGCAAATATTGATGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp TATAATCAGGCTCCACTGGGAAAGTTTGAAGTCCAGGTCTCTGGGAAGTGCAGATCCCCGGCGCAACTTTaGCCTCCACATGAGGCGATC +
Preference number: 4 (lower is better)
Translates to: YNQAPLGKFEVQVSGKCRSPAQL*PPHEAI
Trigger: GATCGCCTCATGTGGAGGGCAAAGTTGCGCCGGGGA...TCTGCACTTCCCAGAGACCTGGACTTCAAACTTTCCCAGTGGAGCCTGATTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp ACTGCCAAGATGCAGTGCCGCATGTTAGAGGCTGTACAGCCAGGGTCTATGCCCACTGGGGACATCATTTaGTTGGTCTTGAAGGGGTAC +
Preference number: 4 (lower is better)
Translates to: TAKMQCRMLEAVQPGSMPTGDII*LVLKGY
Trigger: GTACCCCTTCAAGACCAAGCAAATGATGTCCCCAGT...GGGCATAGACCCTGGCTGTACAGCCTCTAACATGCGGCACTGCATCTTGGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp AGCGATCCAGCTGACCTGGAGGTACAAAAACATCAGGACCCTGTAGGAGCATCTATGGGGCTGTGCTGCTaGATGGTTGATGGGAACGGA +
Preference number: 4 (lower is better)
Translates to: SDPADLEVQKHQDPVGASMGLCC*MVDGNG
Trigger: TCCGTTCCCATCAACCATGCAGCAGCACAGCCCCAT...AGATGCTCCTACAGGGTCCTGATGTTTTTGTACCTCCAGGTCAGCTGGATCGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp AGCATCAATATTTGCTGTGGGGGACAGGCAGTGTTCTTGGAATCCCCACACTGGCTGCTGGGTTCTCAGTaGATCCAGCTCTCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: SINICCGGQAVFLESPHWLLGSQ*IQLSLQ
Trigger: CTGGAGAGAGAGCTGGATGCACTGAGAACCCAGCAG...CCAGTGTGGGGATTCCAAGAACACTGCCTGTCCCCCACAGCAAATATTGATGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp AGCATCAATATTTGCTGTGGGGGACAGGCAGTGTTCTTGGAATCCCCACACTGGAGCTGCTGCAGTGGCTaGGGCATTCATGGCAAAGTG +
Preference number: 4 (lower is better)
Translates to: SINICCGGQAVFLESPHWSCCSG*GIHGKV
Trigger: CACTTTGCCATGAATGCCGCAGCCACTGCAGCAGCT...CCAGTGTGGGGATTCCAAGAACACTGCCTGTCCCCCACAGCAAATATTGATGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp TATAATCAGGCTCCACTGGGAAAGTTTGAAGTCCAGGTCTCTGGGAAGTGCAGAGGTGTCCCTCTCAGCTaGTGCAGTGGCTGCGGCATT +
Preference number: 4 (lower is better)
Translates to: YNQAPLGKFEVQVSGKCRGVPLS*CSGCGI
Trigger: AATGCCGCAGCCACTGCAGCAGCTGAGAGGGACACC...TCTGCACTTCCCAGAGACCTGGACTTCAAACTTTCCCAGTGGAGCCTGATTATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp TCCCCAAACAGAGCAATGGAATTTGGAAATGTCAAGCTCCTTGCAAGACAGCCGGGTGTCCCTCTCAGCTaGTGCAGTGGCTGCGGCATT +
Preference number: 4 (lower is better)
Translates to: SPNRAMEFGNVKLLARQPGVPLS*CSGCGI
Trigger: AATGCCGCAGCCACTGCAGCAGCTGAGAGGGACACC...CGGCTGTCTTGCAAGGAGCTTGACATTTCCAAATTCCATTGCTCTGTTTGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp AGACCCATTTGGCTGTATGGCCATGTACATCACCCCTCAATACAGACTGGCAATTGCTGCTGTCCTTGCTaGCTGTCTTGGCGTGGGCAC +
Preference number: 4 (lower is better)
Translates to: RPIWLYGHVHHPSIQTGNCCCPC*LSWRGH
Trigger: GTGCCCACGCCAAGACAGGCAGCAAGGACAGCAGCA...ATTGCCAGTCTGTATTGAGGGGTGATGTACATGGCCATACAGCCAAATGGGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp TCCCCAAACAGAGCAATGGAATTTGGAAATGTCAAGCTCCTTGCAAGACAGCCGGTGTGCTGCTGTCCTTaGTGCCTGTCTTGGCGTGGG +
Preference number: 4 (lower is better)
Translates to: SPNRAMEFGNVKLLARQPVCCCP*CLSWRG
Trigger: CCCACGCCAAGACAGGCAGCAAGGACAGCAGCACAC...CGGCTGTCTTGCAAGGAGCTTGACATTTCCAAATTCCATTGCTCTGTTTGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp TTTACAATGAAAACACTTGGCAGCTCAGGGGGACCTCGAAGAGCAAGCAAGTCTGTGTGCTGCTGTCCTTaGTGCCTGTCTTGGCGTGGG +
Preference number: 4 (lower is better)
Translates to: FTMKTLGSSGGPRRASKSVCCCP*CLSWRG
Trigger: CCCACGCCAAGACAGGCAGCAAGGACAGCAGCACAC...AGACTTGCTTGCTCTTCGAGGTCCCCCTGAGCTGCCAAGTGTTTTCATTGTAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp AGCGATCCAGCTGACCTGGAGGTACAAAAACATCAGGACCCTGTAGGAGCATCTTGGCACAATGTGCAGTaGCTATGGCCAAGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: SDPADLEVQKHQDPVGASWHNVQ*LWPSRA
Trigger: GGCTCTGCTTGGCCATAGGCACTGCACATTGTGCCA...AGATGCTCCTACAGGGTCCTGATGTTTTTGTACCTCCAGGTCAGCTGGATCGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp TATCCACTGCTTCTGAGGTCCGCAGCCTCACCTGAAGTCTGTGTCCCTAAGTCTGACAGGCATAGAGACTaGCAAGATGCAGTGCCGCAT +
Preference number: 4 (lower is better)
Translates to: YPLLLRSAASPEVCVPKSDRHRD*QDAVPH
Trigger: ATGCGGCACTGCATCTTGGCAGTCTCTATGCCTGTC...AGACTTAGGGACACAGACTTCAGGTGAGGCTGCGGACCTCAGAAGCAGTGGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp TTTACAATGAAAACACTTGGCAGCTCAGGGGGACCTCGAAGAGCAAGCAAGTCTGGCTCCACCACTGCCTaGTCTCCCAACGAAAGCCTG +
Preference number: 4 (lower is better)
Translates to: FTMKTLGSSGGPRRASKSGSTTA*SPNESL
Trigger: CAGGCTTTCGTTGGGAGAGCAGGCAGTGGTGGAGCC...AGACTTGCTTGCTCTTCGAGGTCCCCCTGAGCTGCCAAGTGTTTTCATTGTAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp GTTTCCTGGAGTGCTGTCCTAAGTCTTCCCCAAACAGAGCAATGGAATTTGGAAGCAACCCCAGAGGACTaGACCCAGAAGGGCTCCACC +
Preference number: 4 (lower is better)
Translates to: VSWSAVLSLPQTEQWNLEATPED*TQKGST
Trigger: GGTGGAGCCCTTCTGGGTGCAGTCCTCTGGGGTTGC...TTCCAAATTCCATTGCTCTGTTTGGGGAAGACTTAGGACAGCACTCCAGGAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp TATCCACTGCTTCTGAGGTCCGCAGCCTCACCTGAAGTCTGTGTCCCTAAGTCTAATGACTGGCTGCTCTaGACGGGGCATTCTGAACAC +
Preference number: 4 (lower is better)
Translates to: YPLLLRSAASPEVCVPKSNDWLL*TGHSEH
Trigger: GTGTTCAGAATGCCCCGTGCAGAGCAGCCAGTCATT...AGACTTAGGGACACAGACTTCAGGTGAGGCTGCGGACCTCAGAAGCAGTGGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp GCACAATCACATGTAAACACAACACCGGGCATCCAGACTTTGGGGGCTGATACAAGCCAGATACCAGTCTaGTGGGAAGAGCCGGCACGA +
Preference number: 4 (lower is better)
Translates to: AQSHVNTTPGIQTLGADTSQIPV*WEEPAR
Trigger: TCGTGCCGGCTCTTCCCAGCAGACTGGTATCTGGCT...TGTATCAGCCCCCAAAGTCTGGATGCCCGGTGTTGTGTTTACATGTGATTGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp CAAACGTTACAGCCAGATACCAGTCTGCTGGGAAGAGCCGGCACGAGCACGGCAGATCCTCAGGAAGTTTaGGGAGTGGAAGTTACAAAG +
Preference number: 4 (lower is better)
Translates to: QTLQPDTSLLGRAGTSTADPQEV*GVEVTK
Trigger: CTTTGTAACTTCCACTCCCCAAACTTCCTGAGGATC...TGCCGTGCTCGTGCCGGCTCTTCCCAGCAGACTGGTATCTGGCTGTAACGTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp TTCCCCTCGCCCTCGATGCTTCTTCTCACTGCCACACTCACACTCACGGGACACGATCCTCAGGAAGTTTaGGGAGTGGAAGTTACAAAG +
Preference number: 4 (lower is better)
Translates to: FPSPSMLLLTATLTLTGHDPQEV*GVEVTK
Trigger: CTTTGTAACTTCCACTCCCCAAACTTCCTGAGGATC...GTGTCCCGTGAGTGTGAGTGTGGCAGTGAGAAGAAGCATCGAGGGCGAGGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp TCACCTCAATTTGGGGAGGCTATAACTTCACCGGGGTTACACACCCAAGACCAGTTCGGGACTTCTGACTaGTGCCCCCTGCCATGTAGT +
Preference number: 4 (lower is better)
Translates to: SPQFGEAITSPGLHTQDQFGTSD*CPLPCS
Trigger: ACTACATGGCAGGGGGCACCAGTCAGAAGTCCCGAA...CTGGTCTTGGGTGTGTAACCCCGGTGAAGTTATAGCCTCCCCAAATTGAGGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp CTGGAGTGCTGTCCTAAGTCTTCCCCAAACAGAGCAATGGAATTTGGAAATGTCGGCTTGACCATCTCGTaGAGCATCCCGGGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: LECCPKSSPNRAMEFGNVGLTIS*SIPGCW
Trigger: CCAGCACCCCGGGATGCTCCACGAGATGGTCAAGCC...GACATTTCCAAATTCCATTGCTCTGTTTGGGGAAGACTTAGGACAGCACTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp AGCATCAATATTTGCTGTGGGGGACAGGCAGTGTTCTTGGAATCCCCACACTGGGAACGGAAGTTGGCATaGGCGGCTCGTTACCCCATA +
Preference number: 4 (lower is better)
Translates to: SINICCGGQAVFLESPHWERKLA*AARYPI
Trigger: TATGGGGTAACGAGCCGCCCATGCCAACTTCCGTTC...CCAGTGTGGGGATTCCAAGAACACTGCCTGTCCCCCACAGCAAATATTGATGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp ACTCAGGTCAATGGGGAGGAAGAATTTCCCATTCTCTCAGCACCTGGCATGAAGGATGGGAACGGAAGTTaGCATGGGCGGCTCGTTACC +
Preference number: 4 (lower is better)
Translates to: TQVNGEEEFPILSAPGMKDGNGS*HGRLVT
Trigger: GGTAACGAGCCGCCCATGCCAACTTCCGTTCCCATC...CTTCATGCCAGGTGCTGAGAGAATGGGAAATTCTTCCTCCCCATTGACCTGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp GAAGCCCTGAAACATGGCGATGTGTCTGTTTACAATGAAAACACTTGGCAGCTCCTGGCGGAAGAGGTCTaGGAGGACATGGGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: EALKHGDVSVYNENTWQLLAEEV*EDMGLC
Trigger: GCACAGCCCCATGTCCTCCCAGACCTCTTCCGCCAG...GAGCTGCCAAGTGTTTTCATTGTAAACAGACACATCGCCATGTTTCAGGGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp TCACCTCAATTTGGGGAGGCTATAACTTCACCGGGGTTACACACCCAAGACCAGAATCGCAAAGGCATCTaGACCAAGCTGCTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: SPQFGEAITSPGLHTQDQNRKGI*TKLLAG
Trigger: CCCAGCCAGCAGCTTGGTCCAGATGCCTTTGCGATT...CTGGTCTTGGGTGTGTAACCCCGGTGAAGTTATAGCCTCCCCAAATTGAGGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp TATCCACTGCTTCTGAGGTCCGCAGCCTCACCTGAAGTCTGTGTCCCTAAGTCTATCTCCACCATTTGCTaGGCTCGCTCCACAATCGCA +
Preference number: 4 (lower is better)
Translates to: YPLLLRSAASPEVCVPKSISTIC*ARSTIA
Trigger: TGCGATTGTGGAGCGAGCCCAGCAAATGGTGGAGAT...AGACTTAGGGACACAGACTTCAGGTGAGGCTGCGGACCTCAGAAGCAGTGGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp AGCGATCCAGCTGACCTGGAGGTACAAAAACATCAGGACCCTGTAGGAGCATCTTCGATGTGTCTCCGATaGTCCTCACTTGCAGTCCGC +
Preference number: 4 (lower is better)
Translates to: SDPADLEVQKHQDPVGASSMCLR*SSLAVR
Trigger: GCGGACTGCAAGTGAGGACCATCGGAGACACATCGA...AGATGCTCCTACAGGGTCCTGATGTTTTTGTACCTCCAGGTCAGCTGGATCGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp CTCAGTTTTCCTGTCTGCACAACAGGTACTCCGATGCTCAGTGTGAGACTAGAGTTGATGACCCTGGCCTaGGCGTTGCTCAAAGCCTGG +
Preference number: 4 (lower is better)
Translates to: LSFPVCTTGTPMLSVRLELMTLA*ALLKAW
Trigger: CCAGGCTTTGAGCAACGCCCAGGCCAGGGTCATCAA...CTCTAGTCTCACACTGAGCATCGGAGTACCTGTTGTGCAGACAGGAAAACTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp AGCGATCCAGCTGACCTGGAGGTACAAAAACATCAGGACCCTGTAGGAGCATCTTGGCTGCGGCATTCATaGCAAAGTGTCGGATGGTGC +
Preference number: 4 (lower is better)
Translates to: SDPADLEVQKHQDPVGASWLRHS*QSVGWC
Trigger: GCACCATCCGACACTTTGCCATGAATGCCGCAGCCA...AGATGCTCCTACAGGGTCCTGATGTTTTTGTACCTCCAGGTCAGCTGGATCGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp CTCAGTTTTCCTGTCTGCACAACAGGTACTCCGATGCTCAGTGTGAGACTAGAGTCTCTGCGGTCCCTTTaGCCGCTGGGTGTTTCAGGA +
Preference number: 4 (lower is better)
Translates to: LSFPVCTTGTPMLSVRLESLRSL*PLGVSG
Trigger: TCCTGAAACACCCAGCGGCCAAAGGGACCGCAGAGA...CTCTAGTCTCACACTGAGCATCGGAGTACCTGTTGTGCAGACAGGAAAACTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp ACTCAGGTCAATGGGGAGGAAGAATTTCCCATTCTCTCAGCACCTGGCATGAAGGGTGCCACGGAGGTCTaGATGCTGATCGAGAGCAAG +
Preference number: 4 (lower is better)
Translates to: TQVNGEEEFPILSAPGMKGATEV*MLIESK
Trigger: CTTGCTCTCGATCAGCATCCAGACCTCCGTGGCACC...CTTCATGCCAGGTGCTGAGAGAATGGGAAATTCTTCCTCCCCATTGACCTGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp TCCCCAAACAGAGCAATGGAATTTGGAAATGTCAAGCTCCTTGCAAGACAGCCGACTCCTCTGTCGTACTaGGTGGCACAGAGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: SPNRAMEFGNVKLLARQPTPLSY*VAQRLA
Trigger: GGCCAGCCTCTGTGCCACCCAGTACGACAGAGGAGT...CGGCTGTCTTGCAAGGAGCTTGACATTTCCAAATTCCATTGCTCTGTTTGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp TCTGGGACTCAGGTCAATGGGGAGGAAGAATTTCCCATTCTCTCAGCACCTGGCGAGGTGATGAGCAGGTaGCACAATGTGCAGTGCCTA +
Preference number: 4 (lower is better)
Translates to: SGTQVNGEEEFPILSAPGEVMSR*HNVQCL
Trigger: TAGGCACTGCACATTGTGCCACCTGCTCATCACCTC...GCCAGGTGCTGAGAGAATGGGAAATTCTTCCTCCCCATTGACCTGAGTCCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp TCCCCAAACAGAGCAATGGAATTTGGAAATGTCAAGCTCCTTGCAAGACAGCCGCAACCCTTTCCCCCATaGATGAGGCCTCCTGTGCCC +
Preference number: 4 (lower is better)
Translates to: SPNRAMEFGNVKLLARQPQPFPP*MRPPVP
Trigger: GGGCACAGGAGGCCTCATCCATGGGGGAAAGGGTTG...CGGCTGTCTTGCAAGGAGCTTGACATTTCCAAATTCCATTGCTCTGTTTGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp TCACCTCAATTTGGGGAGGCTATAACTTCACCGGGGTTACACACCCAAGACCAGGGGCAATCAGGTGTCTaGGGCATGAAGACGAGGCTT +
Preference number: 4 (lower is better)
Translates to: SPQFGEAITSPGLHTQDQGQSGV*GMKTRL
Trigger: AAGCCTCGTCTTCATGCCCCAGACACCTGATTGCCC...CTGGTCTTGGGTGTGTAACCCCGGTGAAGTTATAGCCTCCCCAAATTGAGGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp TTCCCCTCGCCCTCGATGCTTCTTCTCACTGCCACACTCACACTCACGGGACACTTTAGTGCCCTGGCTTaGCAGGAAATTTCCCATAGA +
Preference number: 4 (lower is better)
Translates to: FPSPSMLLLTATLTLTGHFSALA*QEISHR
Trigger: TCTATGGGAAATTTCCTGCCAAGCCAGGGCACTAAA...GTGTCCCGTGAGTGTGAGTGTGGCAGTGAGAAGAAGCATCGAGGGCGAGGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp CTCAGTTTTCCTGTCTGCACAACAGGTACTCCGATGCTCAGTGTGAGACTAGAGCGGTTCTTGGCGTGCTaGCTGGTAGACCATTTGTGG +
Preference number: 4 (lower is better)
Translates to: LSFPVCTTGTPMLSVRLERFLAC*LVDHLW
Trigger: CCACAAATGGTCTACCAGTCAGCACGCCAAGAACCG...CTCTAGTCTCACACTGAGCATCGGAGTACCTGTTGTGCAGACAGGAAAACTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp CTTAAGAGGAGTGCAAGATCATTCAGAGAACACAGAGAAGCATGCTCCACTTACTCCTCGTTGTTCTGCTaGGGCTGCGTGGACCGGACC +
Preference number: 4 (lower is better)
Translates to: LKRSARSFREHREACSTYSSLFC*GCVDRT
Trigger: GGTCCGGTCCACGCAGCCTCAGCAGAACAACGAGGA...GTAAGTGGAGCATGCTTCTCTGTGTTCTCTGAATGATCTTGCACTCCTCTTAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp GTTTCCTGGAGTGCTGTCCTAAGTCTTCCCCAAACAGAGCAATGGAATTTGGAAGCTGCTGCTGCCCCCTaGAGAACTGCGACTGTGCTT +
Preference number: 4 (lower is better)
Translates to: VSWSAVLSLPQTEQWNLEAAAAP*RTATVL
Trigger: AAGCACAGTCGCAGTTCTTCAGGGGGCAGCAGCAGC...TTCCAAATTCCATTGCTCTGTTTGGGGAAGACTTAGGACAGCACTCCAGGAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp CTCAGTTTTCCTGTCTGCACAACAGGTACTCCGATGCTCAGTGTGAGACTAGAGGTGCTGCTGCATGGTTaGTGGGAACGGAAGTTGGCA +
Preference number: 4 (lower is better)
Translates to: LSFPVCTTGTPMLSVRLEVLLHG*WERKLA
Trigger: TGCCAACTTCCGTTCCCATCAACCATGCAGCAGCAC...CTCTAGTCTCACACTGAGCATCGGAGTACCTGTTGTGCAGACAGGAAAACTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp AGCATCAATATTTGCTGTGGGGGACAGGCAGTGTTCTTGGAATCCCCACACTGGGTAGCTGCCATTCCGTaGGTGGTTGATGATCGTGGT +
Preference number: 4 (lower is better)
Translates to: SINICCGGQAVFLESPHWVAAIP*VVDDRG
Trigger: ACCACGATCATCAACCACTCACGGAATGGCAGCTAC...CCAGTGTGGGGATTCCAAGAACACTGCCTGTCCCCCACAGCAAATATTGATGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp AGCGATCCAGCTGACCTGGAGGTACAAAAACATCAGGACCCTGTAGGAGCATCTGTGTATTCCATGTCCTaGCACCTTCTGTTGGCCTGC +
Preference number: 4 (lower is better)
Translates to: SDPADLEVQKHQDPVGASVYSMS*HLLLAC
Trigger: GCAGGCCAACAGAAGGTGTCAGGACATGGAATACAC...AGATGCTCCTACAGGGTCCTGATGTTTTTGTACCTCCAGGTCAGCTGGATCGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp TCTGGGACTCAGGTCAATGGGGAGGAAGAATTTCCCATTCTCTCAGCACCTGGCCATGGTTGGCACAGGTaGCACTGCATTATGCCAAGA +
Preference number: 4 (lower is better)
Translates to: SGTQVNGEEEFPILSAPGHGWHR*HCIMPR
Trigger: TCTTGGCATAATGCAGTGTCACCTGTGCCAACCATG...GCCAGGTGCTGAGAGAATGGGAAATTCTTCCTCCCCATTGACCTGAGTCCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp TCACCTCAATTTGGGGAGGCTATAACTTCACCGGGGTTACACACCCAAGACCAGAGCAAGTCTGACACCTaGTTGGGGCAATCAGGTGTC +
Preference number: 4 (lower is better)
Translates to: SPQFGEAITSPGLHTQDQSKSDT*LGQSGV
Trigger: GACACCTGATTGCCCCAATCAGGTGTCAGACTTGCT...CTGGTCTTGGGTGTGTAACCCCGGTGAAGTTATAGCCTCCCCAAATTGAGGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp TATCCACTGCTTCTGAGGTCCGCAGCCTCACCTGAAGTCTGTGTCCCTAAGTCTCTAGCTTCAGAGACCTaGCTCCAACTTCTCCAGTTC +
Preference number: 4 (lower is better)
Translates to: YPLLLRSAASPEVCVPKSLASET*LQLLQF
Trigger: GAACTGGAGAAGTTGGAGTCAGGTCTCTGAAGCTAG...AGACTTAGGGACACAGACTTCAGGTGAGGCTGCGGACCTCAGAAGCAGTGGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp AGACCCATTTGGCTGTATGGCCATGTACATCACCCCTCAATACAGACTGGCAATTCTCAGCACCTGGCATaGAGGTGCTACAGCCACTGC +
Preference number: 4 (lower is better)
Translates to: RPIWLYGHVHHPSIQTGNSQHLA*RCYSHC
Trigger: GCAGTGGCTGTAGCACCTTCATGCCAGGTGCTGAGA...ATTGCCAGTCTGTATTGAGGGGTGATGTACATGGCCATACAGCCAAATGGGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp TCTGGGACTCAGGTCAATGGGGAGGAAGAATTTCCCATTCTCTCAGCACCTGGCCACTTTGAGAGGCTCTaGGGCCAAAGACTCATTCCA +
Preference number: 4 (lower is better)
Translates to: SGTQVNGEEEFPILSAPGHFERL*GQRLIP
Trigger: TGGAATGAGTCTTTGGCCTCAGAGCCTCTCAAAGTG...GCCAGGTGCTGAGAGAATGGGAAATTCTTCCTCCCCATTGACCTGAGTCCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp TCACCTCAATTTGGGGAGGCTATAACTTCACCGGGGTTACACACCCAAGACCAGTGTTCTCGGTTGGGGTaGCATACCGCAGTTGTTCCT +
Preference number: 4 (lower is better)
Translates to: SPQFGEAITSPGLHTQDQCSRLG*HTAVVP
Trigger: AGGAACAACTGCGGTATGGCACCCCAACCGAGAACA...CTGGTCTTGGGTGTGTAACCCCGGTGAAGTTATAGCCTCCCCAAATTGAGGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp TCTGGGACTCAGGTCAATGGGGAGGAAGAATTTCCCATTCTCTCAGCACCTGGCGAAGAACTGCGACTGTaGTTTGGCCTCCTCGTAAGT +
Preference number: 4 (lower is better)
Translates to: SGTQVNGEEEFPILSAPGEELRL*FGLLVS
Trigger: ACTTACGAGGAGGCCAAAGCACAGTCGCAGTTCTTC...GCCAGGTGCTGAGAGAATGGGAAATTCTTCCTCCCCATTGACCTGAGTCCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp TTTACAATGAAAACACTTGGCAGCTCAGGGGGACCTCGAAGAGCAAGCAAGTCTAGCGCCTCGTCCTTATaGGCCTGTCCACTGTTGGCA +
Preference number: 4 (lower is better)
Translates to: FTMKTLGSSGGPRRASKSSASSL*ACPLLA
Trigger: TGCCAACAGTGGACAGGCGCATAAGGACGAGGCGCT...AGACTTGCTTGCTCTTCGAGGTCCCCCTGAGCTGCCAAGTGTTTTCATTGTAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp CTGGAGTGCTGTCCTAAGTCTTCCCCAAACAGAGCAATGGAATTTGGAAATGTCGAGCCGGGAAGGTGTTaGTTGGCCCCATTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: LECCPKSSPNRAMEFGNVEPGRC*LAPFLS
Trigger: GGAGAGGAATGGGGCCAAGCAACACCTTCCCGGCTC...GACATTTCCAAATTCCATTGCTCTGTTTGGGGAAGACTTAGGACAGCACTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp GCACAATCACATGTAAACACAACACCGGGCATCCAGACTTTGGGGGCTGATACAAGCTGCTGCAGTGGCTaGGGCATTCATGGCAAAGTG +
Preference number: 4 (lower is better)
Translates to: AQSHVNTTPGIQTLGADTSCCSG*GIHGKV
Trigger: CACTTTGCCATGAATGCCGCAGCCACTGCAGCAGCT...TGTATCAGCCCCCAAAGTCTGGATGCCCGGTGTTGTGTTTACATGTGATTGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp TCCCCAAACAGAGCAATGGAATTTGGAAATGTCAAGCTCCTTGCAAGACAGCCGGTCCCTCTCAGCTGCTaGAGTGGCTGCGGCATTCAT +
Preference number: 4 (lower is better)
Translates to: SPNRAMEFGNVKLLARQPVPLSC*SGCGIH
Trigger: ATGAATGCCGCAGCCACTGCAGCAGCTGAGAGGGAC...CGGCTGTCTTGCAAGGAGCTTGACATTTCCAAATTCCATTGCTCTGTTTGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp TATAATCAGGCTCCACTGGGAAAGTTTGAAGTCCAGGTCTCTGGGAAGTGCAGACACCTTCTGTTGGCCTaGACCACCTCCTCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: YNQAPLGKFEVQVSGKCRHLLLA*TTSSSS
Trigger: AGAGGAGGAGGAGGTGGTGCAGGCCAACAGAAGGTG...TCTGCACTTCCCAGAGACCTGGACTTCAAACTTTCCCAGTGGAGCCTGATTATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp ACTCAGGTCAATGGGGAGGAAGAATTTCCCATTCTCTCAGCACCTGGCATGAAGTGTCCCAGTAGCTGCTaGTATGGATGGAACGGAGCG +
Preference number: 4 (lower is better)
Translates to: TQVNGEEEFPILSAPGMKCPSSC*YGWNGA
Trigger: CGCTCCGTTCCATCCATAGCAGCAGCTACTGGGACA...CTTCATGCCAGGTGCTGAGAGAATGGGAAATTCTTCCTCCCCATTGACCTGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp AGCATCAATATTTGCTGTGGGGGACAGGCAGTGTTCTTGGAATCCCCACACTGGGTGTGTCCCAGTAGCTaGTGCTATGGATGGAACGGA +
Preference number: 4 (lower is better)
Translates to: SINICCGGQAVFLESPHWVCPSS*CYGWNG
Trigger: TCCGTTCCATCCATAGCAGCAGCTACTGGGACACAC...CCAGTGTGGGGATTCCAAGAACACTGCCTGTCCCCCACAGCAAATATTGATGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp TCACCTCAATTTGGGGAGGCTATAACTTCACCGGGGTTACACACCCAAGACCAGCCAGCAGCAATCCTATaGTCCCCTTCCAGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: SPQFGEAITSPGLHTQDQPAAIL*SPSRSS
Trigger: AGAAGACCTGGAAGGGGAGCATAGGATTGCTGCTGG...CTGGTCTTGGGTGTGTAACCCCGGTGAAGTTATAGCCTCCCCAAATTGAGGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp CTGGAGTGCTGTCCTAAGTCTTCCCCAAACAGAGCAATGGAATTTGGAAATGTCAGTGGGGCAGAGGCATaGTCATGGTGCTCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: LECCPKSSPNRAMEFGNVSGAEA*SWCSFP
Trigger: GGGGAAGGAGCACCATGAGCATGCCTCTGCCCCACT...GACATTTCCAAATTCCATTGCTCTGTTTGGGGAAGACTTAGGACAGCACTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp CTTAAGAGGAGTGCAAGATCATTCAGAGAACACAGAGAAGCATGCTCCACTTACGGCCAAGGCAGCCCCTaGCCTGCGTGCATGGTTAGA +
Preference number: 4 (lower is better)
Translates to: LKRSARSFREHREACSTYGQGSP*PACMVR
Trigger: TCTAACCATGCACGCAGGGCAGGGGCTGCCTTGGCC...GTAAGTGGAGCATGCTTCTCTGTGTTCTCTGAATGATCTTGCACTCCTCTTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp AGACCCATTTGGCTGTATGGCCATGTACATCACCCCTCAATACAGACTGGCAATAGGTGCTACAGCCACTaGATCATGAGGGTGCGCACC +
Preference number: 4 (lower is better)
Translates to: RPIWLYGHVHHPSIQTGNRCYSH*IMRVRT
Trigger: GGTGCGCACCCTCATGATGCAGTGGCTGTAGCACCT...ATTGCCAGTCTGTATTGAGGGGTGATGTACATGGCCATACAGCCAAATGGGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp TCTGGGACTCAGGTCAATGGGGAGGAAGAATTTCCCATTCTCTCAGCACCTGGCTGGCCTGGTGCTGAATaGCCAGCAAGTTCATGTTCT +
Preference number: 4 (lower is better)
Translates to: SGTQVNGEEEFPILSAPGWPGAE*PASSCS
Trigger: AGAACATGAACTTGCTGGCCATTCAGCACCAGGCCA...GCCAGGTGCTGAGAGAATGGGAAATTCTTCCTCCCCATTGACCTGAGTCCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp TCCCCAAACAGAGCAATGGAATTTGGAAATGTCAAGCTCCTTGCAAGACAGCCGTCTGCTGAGGCTGCGTaGACCGGACCTGTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: SPNRAMEFGNVKLLARQPSAEAA*TGPVSP
Trigger: TGGAGAAACAGGTCCGGTCCACGCAGCCTCAGCAGA...CGGCTGTCTTGCAAGGAGCTTGACATTTCCAAATTCCATTGCTCTGTTTGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp TCACCTCAATTTGGGGAGGCTATAACTTCACCGGGGTTACACACCCAAGACCAGTGGCCTCCTCGTAAGTaGGCAGTTCCTCGTTGTTCT +
Preference number: 4 (lower is better)
Translates to: SPQFGEAITSPGLHTQDQWPPRK*AVPRCS
Trigger: AGAACAACGAGGAACTGCCCACTTACGAGGAGGCCA...CTGGTCTTGGGTGTGTAACCCCGGTGAAGTTATAGCCTCCCCAAATTGAGGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp ACTCAGGTCAATGGGGAGGAAGAATTTCCCATTCTCTCAGCACCTGGCATGAAGACTGCGACTGTGCTTTaGCCTCCTCGTAAGTGGGCA +
Preference number: 4 (lower is better)
Translates to: TQVNGEEEFPILSAPGMKTATVL*PPRKWA
Trigger: TGCCCACTTACGAGGAGGCCAAAGCACAGTCGCAGT...CTTCATGCCAGGTGCTGAGAGAATGGGAAATTCTTCCTCCCCATTGACCTGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp GCACAATCACATGTAAACACAACACCGGGCATCCAGACTTTGGGGGCTGATACAAAAAGTCCGTGCTCCTaGGTCTTGCTGACTGGGGAC +
Preference number: 4 (lower is better)
Translates to: AQSHVNTTPGIQTLGADTKSPCS*VLLTGD
Trigger: GTCCCCAGTCAGCAAGACCCAGGAGCACGGACTTTT...TGTATCAGCCCCCAAAGTCTGGATGCCCGGTGTTGTGTTTACATGTGATTGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp CTTAAGAGGAGTGCAAGATCATTCAGAGAACACAGAGAAGCATGCTCCACTTACTACTCAGGGGGTGGCTaGTACCGCAGGACGGCCACA +
Preference number: 4 (lower is better)
Translates to: LKRSARSFREHREACSTYYSGGG*YRRTAT
Trigger: TGTGGCCGTCCTGCGGTACCAGCCACCCCCTGAGTA...GTAAGTGGAGCATGCTTCTCTGTGTTCTCTGAATGATCTTGCACTCCTCTTAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp TCCCCAAACAGAGCAATGGAATTTGGAAATGTCAAGCTCCTTGCAAGACAGCCGGATGGGAACGGAAGTTaGCATGGGCGGCTCGTTACC +
Preference number: 4 (lower is better)
Translates to: SPNRAMEFGNVKLLARQPDGNGS*HGRLVT
Trigger: GGTAACGAGCCGCCCATGCCAACTTCCGTTCCCATC...CGGCTGTCTTGCAAGGAGCTTGACATTTCCAAATTCCATTGCTCTGTTTGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp AGCGATCCAGCTGACCTGGAGGTACAAAAACATCAGGACCCTGTAGGAGCATCTGGCTGTGCTGCTGCATaGTTGATGGGAACGGAAGTT +
Preference number: 4 (lower is better)
Translates to: SDPADLEVQKHQDPVGASGCAAA*LMGTEV
Trigger: AACTTCCGTTCCCATCAACCATGCAGCAGCACAGCC...AGATGCTCCTACAGGGTCCTGATGTTTTTGTACCTCCAGGTCAGCTGGATCGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp GCCCTCGATGCTTCTTCTCACTGCCACACTCACACTCACGGGACACCCCATGGTTCTTTTTCAAACTTGTaGAGCTTGTCGGCATTGTCG +
Preference number: 4 (lower is better)
Translates to: ALDASSHCHTHTHGTPHGSFSNL*SLSALS
Trigger: CGACAATGCCGACAAGCTCCACAAGTTTGAAAAAGA...ACCATGGGGTGTCCCGTGAGTGTGAGTGTGGCAGTGAGAAGAAGCATCGAGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp TATAATCAGGCTCCACTGGGAAAGTTTGAAGTCCAGGTCTCTGGGAAGTGCAGATTGATGACCCTGGCCTaGGCGTTGCTCAAAGCCTGG +
Preference number: 4 (lower is better)
Translates to: YNQAPLGKFEVQVSGKCRLMTLA*ALLKAW
Trigger: CCAGGCTTTGAGCAACGCCCAGGCCAGGGTCATCAA...TCTGCACTTCCCAGAGACCTGGACTTCAAACTTTCCCAGTGGAGCCTGATTATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp TATCCACTGCTTCTGAGGTCCGCAGCCTCACCTGAAGTCTGTGTCCCTAAGTCTTTCCGGCATGTTGGCTaGCTGGCCATTTCCATGTTT +
Preference number: 4 (lower is better)
Translates to: YPLLLRSAASPEVCVPKSFRHVG*LAISMF
Trigger: AAACATGGAAATGGCCAGCCAGCCAACATGCCGGAA...AGACTTAGGGACACAGACTTCAGGTGAGGCTGCGGACCTCAGAAGCAGTGGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp TATCCACTGCTTCTGAGGTCCGCAGCCTCACCTGAAGTCTGTGTCCCTAAGTCTTGTATTCCGGCATGTTaGCTGGCTGGCCATTTCCAT +
Preference number: 4 (lower is better)
Translates to: YPLLLRSAASPEVCVPKSCIPAC*LAGHFH
Trigger: ATGGAAATGGCCAGCCAGCCAACATGCCGGAATACA...AGACTTAGGGACACAGACTTCAGGTGAGGCTGCGGACCTCAGAAGCAGTGGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp GCACAATCACATGTAAACACAACACCGGGCATCCAGACTTTGGGGGCTGATACATCTCAGCTGCTGCAGTaGCTGCGGCATTCATGGCAA +
Preference number: 4 (lower is better)
Translates to: AQSHVNTTPGIQTLGADTSQLLQ*LRHSWQ
Trigger: TTGCCATGAATGCCGCAGCCACTGCAGCAGCTGAGA...TGTATCAGCCCCCAAAGTCTGGATGCCCGGTGTTGTGTTTACATGTGATTGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp TCACCTCAATTTGGGGAGGCTATAACTTCACCGGGGTTACACACCCAAGACCAGCTGCCATTCCGTGAGTaGTTGATGATCGTGGTGTCC +
Preference number: 4 (lower is better)
Translates to: SPQFGEAITSPGLHTQDQLPFRE*LMIVVS
Trigger: GGACACCACGATCATCAACCACTCACGGAATGGCAG...CTGGTCTTGGGTGTGTAACCCCGGTGAAGTTATAGCCTCCCCAAATTGAGGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp TTTACAATGAAAACACTTGGCAGCTCAGGGGGACCTCGAAGAGCAAGCAAGTCTTCCTCTTGCCAGATGTaGGCCTCCAGCGAGCTCTCT +
Preference number: 4 (lower is better)
Translates to: FTMKTLGSSGGPRRASKSSSCQM*ASSELS
Trigger: AGAGAGCTCGCTGGAGGCCCACATCTGGCAAGAGGA...AGACTTGCTTGCTCTTCGAGGTCCCCCTGAGCTGCCAAGTGTTTTCATTGTAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp CTCAGTTTTCCTGTCTGCACAACAGGTACTCCGATGCTCAGTGTGAGACTAGAGACAACAGAGGCAACCTaGTGCCACGGAGGTCTGGAT +
Preference number: 4 (lower is better)
Translates to: LSFPVCTTGTPMLSVRLETTEAT*CHGGLD
Trigger: ATCCAGACCTCCGTGGCACCAGGTTGCCTCTGTTGT...CTCTAGTCTCACACTGAGCATCGGAGTACCTGTTGTGCAGACAGGAAAACTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp TATCCACTGCTTCTGAGGTCCGCAGCCTCACCTGAAGTCTGTGTCCCTAAGTCTCCTGCCTCTTTTCCGTaGCACTTCTGTCTCACTTTG +
Preference number: 4 (lower is better)
Translates to: YPLLLRSAASPEVCVPKSPASFP*HFCLTL
Trigger: CAAAGTGAGACAGAAGTGCCACGGAAAAGAGGCAGG...AGACTTAGGGACACAGACTTCAGGTGAGGCTGCGGACCTCAGAAGCAGTGGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp GCACAATCACATGTAAACACAACACCGGGCATCCAGACTTTGGGGGCTGATACAGGGTGGCACAGAGGCTaGCCAAAGCCACTGATTTCT +
Preference number: 4 (lower is better)
Translates to: AQSHVNTTPGIQTLGADTGWHRG*PKPLIS
Trigger: AGAAATCAGTGGCTTTGGCCAGCCTCTGTGCCACCC...TGTATCAGCCCCCAAAGTCTGGATGCCCGGTGTTGTGTTTACATGTGATTGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp TATAATCAGGCTCCACTGGGAAAGTTTGAAGTCCAGGTCTCTGGGAAGTGCAGACCACACCCTATGGCATaGGGTGAGCTCCATGCTCAG +
Preference number: 4 (lower is better)
Translates to: YNQAPLGKFEVQVSGKCRPHPMA*GELHAQ
Trigger: CTGAGCATGGAGCTCACCCCATGCCATAGGGTGTGG...TCTGCACTTCCCAGAGACCTGGACTTCAAACTTTCCCAGTGGAGCCTGATTATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp ACTGCCAAGATGCAGTGCCGCATGTTAGAGGCTGTACAGCCAGGGTCTATGCCCATAATCAGGCTCCACTaGGAAAGTTTGAAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: TAKMQCRMLEAVQPGSMPIIRLH*ESLKSR
Trigger: CCTGGACTTCAAACTTTCCCAGTGGAGCCTGATTAT...GGGCATAGACCCTGGCTGTACAGCCTCTAACATGCGGCACTGCATCTTGGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp TCACCTCAATTTGGGGAGGCTATAACTTCACCGGGGTTACACACCCAAGACCAGCCTGCCCTGCGTGCATaGTTAGAACATGCTGAACTC +
Preference number: 4 (lower is better)
Translates to: SPQFGEAITSPGLHTQDQPALRA*LEHAEL
Trigger: GAGTTCAGCATGTTCTAACCATGCACGCAGGGCAGG...CTGGTCTTGGGTGTGTAACCCCGGTGAAGTTATAGCCTCCCCAAATTGAGGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp AGCATCAATATTTGCTGTGGGGGACAGGCAGTGTTCTTGGAATCCCCACACTGGCATTCTCTCAGCACCTaGCATGAAGGTGCTACAGCC +
Preference number: 4 (lower is better)
Translates to: SINICCGGQAVFLESPHWHSLST*HEGATA
Trigger: GGCTGTAGCACCTTCATGCCAGGTGCTGAGAGAATG...CCAGTGTGGGGATTCCAAGAACACTGCCTGTCCCCCACAGCAAATATTGATGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp TATCCACTGCTTCTGAGGTCCGCAGCCTCACCTGAAGTCTGTGTCCCTAAGTCTCCACTTACTCCAGCGTaGACACTGGTTTTGAACCCT +
Preference number: 4 (lower is better)
Translates to: YPLLLRSAASPEVCVPKSPLTPA*TLVLNP
Trigger: AGGGTTCAAAACCAGTGTCCACGCTGGAGTAAGTGG...AGACTTAGGGACACAGACTTCAGGTGAGGCTGCGGACCTCAGAAGCAGTGGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp AGCATCAATATTTGCTGTGGGGGACAGGCAGTGTTCTTGGAATCCCCACACTGGTTTGCCTATCTCCCATaGAGCCACACGTCAGAGGCA +
Preference number: 4 (lower is better)
Translates to: SINICCGGQAVFLESPHWFAYLP*SHTSEA
Trigger: TGCCTCTGACGTGTGGCTCCATGGGAGATAGGCAAA...CCAGTGTGGGGATTCCAAGAACACTGCCTGTCCCCCACAGCAAATATTGATGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp AGACCCATTTGGCTGTATGGCCATGTACATCACCCCTCAATACAGACTGGCAATCGGTTCTTGGCGTGCTaGCTGGTAGACCATTTGTGG +
Preference number: 4 (lower is better)
Translates to: RPIWLYGHVHHPSIQTGNRFLAC*LVDHLW
Trigger: CCACAAATGGTCTACCAGTCAGCACGCCAAGAACCG...ATTGCCAGTCTGTATTGAGGGGTGATGTACATGGCCATACAGCCAAATGGGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp TATAATCAGGCTCCACTGGGAAAGTTTGAAGTCCAGGTCTCTGGGAAGTGCAGAGCTCCTGGGTCTTGCTaGCTGGGGACATCATTTGCT +
Preference number: 4 (lower is better)
Translates to: YNQAPLGKFEVQVSGKCRAPGSC*LGTSFA
Trigger: AGCAAATGATGTCCCCAGTCAGCAAGACCCAGGAGC...TCTGCACTTCCCAGAGACCTGGACTTCAAACTTTCCCAGTGGAGCCTGATTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp ACTCAGGTCAATGGGGAGGAAGAATTTCCCATTCTCTCAGCACCTGGCATGAAGAGTTCACAGTCAGAATaGGGTTCGCAGCTGCAACCC +
Preference number: 4 (lower is better)
Translates to: TQVNGEEEFPILSAPGMKSSQSE*GSQLQP
Trigger: GGGTTGCAGCTGCGAACCTCATTCTGACTGTGAACT...CTTCATGCCAGGTGCTGAGAGAATGGGAAATTCTTCCTCCCCATTGACCTGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp CTTAAGAGGAGTGCAAGATCATTCAGAGAACACAGAGAAGCATGCTCCACTTACCGGAGGTCTGGATGCTaGTCGAGAGCAAGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: LKRSARSFREHREACSTYRRSGC*SRASRG
Trigger: GCCTCTGCTTGCTCTCGATCAGCATCCAGACCTCCG...GTAAGTGGAGCATGCTTCTCTGTGTTCTCTGAATGATCTTGCACTCCTCTTAAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp GCCCTCGATGCTTCTTCTCACTGCCACACTCACACTCACGGGACACCCCATGGTAAACCCGGAAAAACCTaGCAACACTGTATATACAAC +
Preference number: 4 (lower is better)
Translates to: ALDASSHCHTHTHGTPHGKPGKT*QHCIYN
Trigger: GTTGTATATACAGTGTTGTCAGGTTTTTCCGGGTTT...ACCATGGGGTGTCCCGTGAGTGTGAGTGTGGCAGTGAGAAGAAGCATCGAGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp CTTAAGAGGAGTGCAAGATCATTCAGAGAACACAGAGAAGCATGCTCCACTTACCCTTTCCCCCATGGATaGGGCCTCCTGTGCCCTCTT +
Preference number: 4 (lower is better)
Translates to: LKRSARSFREHREACSTYPFPHG*GLLCPL
Trigger: AAGAGGGCACAGGAGGCCTCATCCATGGGGGAAAGG...GTAAGTGGAGCATGCTTCTCTGTGTTCTCTGAATGATCTTGCACTCCTCTTAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp CTCAGTTTTCCTGTCTGCACAACAGGTACTCCGATGCTCAGTGTGAGACTAGAGCTCTCCCCTTCATCCTaGGATAGGACCCTCAAGTTC +
Preference number: 4 (lower is better)
Translates to: LSFPVCTTGTPMLSVRLELSPSS*DRTLKF
Trigger: GAACTTGAGGGTCCTATCTCAGGATGAAGGGGAGAG...CTCTAGTCTCACACTGAGCATCGGAGTACCTGTTGTGCAGACAGGAAAACTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp TCACCTCAATTTGGGGAGGCTATAACTTCACCGGGGTTACACACCCAAGACCAGCTAGCTTCAGAGACCTaGCTCCAACTTCTCCAGTTC +
Preference number: 4 (lower is better)
Translates to: SPQFGEAITSPGLHTQDQLASET*LQLLQF
Trigger: GAACTGGAGAAGTTGGAGTCAGGTCTCTGAAGCTAG...CTGGTCTTGGGTGTGTAACCCCGGTGAAGTTATAGCCTCCCCAAATTGAGGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp TATCCACTGCTTCTGAGGTCCGCAGCCTCACCTGAAGTCTGTGTCCCTAAGTCTATGGTTAGAACATGCTaGACTCTGCAGTGTCACTGG +
Preference number: 4 (lower is better)
Translates to: YPLLLRSAASPEVCVPKSMVRTC*TLQCHW
Trigger: CCAGTGACACTGCAGAGTTCAGCATGTTCTAACCAT...AGACTTAGGGACACAGACTTCAGGTGAGGCTGCGGACCTCAGAAGCAGTGGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp GTTTCCTGGAGTGCTGTCCTAAGTCTTCCCCAAACAGAGCAATGGAATTTGGAATCTCAGCACCTGGCATaGAGGTGCTACAGCCACTGC +
Preference number: 4 (lower is better)
Translates to: VSWSAVLSLPQTEQWNLESQHLA*RCYSHC
Trigger: GCAGTGGCTGTAGCACCTTCATGCCAGGTGCTGAGA...TTCCAAATTCCATTGCTCTGTTTGGGGAAGACTTAGGACAGCACTCCAGGAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp TATAATCAGGCTCCACTGGGAAAGTTTGAAGTCCAGGTCTCTGGGAAGTGCAGATCCTGGATCAGCCGCTaGAATACTGTTCCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: YNQAPLGKFEVQVSGKCRSWISR*NTVPAA
Trigger: GGCAGCTGGAACAGTATTGCAGCGGCTGATCCAGGA...TCTGCACTTCCCAGAGACCTGGACTTCAAACTTTCCCAGTGGAGCCTGATTATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp AGCGATCCAGCTGACCTGGAGGTACAAAAACATCAGGACCCTGTAGGAGCATCTGAAGAACTGCGACTGTaGTTTGGCCTCCTCGTAAGT +
Preference number: 4 (lower is better)
Translates to: SDPADLEVQKHQDPVGASEELRL*FGLLVS
Trigger: ACTTACGAGGAGGCCAAAGCACAGTCGCAGTTCTTC...AGATGCTCCTACAGGGTCCTGATGTTTTTGTACCTCCAGGTCAGCTGGATCGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp GAAGCCCTGAAACATGGCGATGTGTCTGTTTACAATGAAAACACTTGGCAGCTCAGCGCCTCGTCCTTATaGGCCTGTCCACTGTTGGCA +
Preference number: 4 (lower is better)
Translates to: EALKHGDVSVYNENTWQLSASSL*ACPLLA
Trigger: TGCCAACAGTGGACAGGCGCATAAGGACGAGGCGCT...GAGCTGCCAAGTGTTTTCATTGTAAACAGACACATCGCCATGTTTCAGGGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp TATCCACTGCTTCTGAGGTCCGCAGCCTCACCTGAAGTCTGTGTCCCTAAGTCTAATATCTCCACCATTTaGTGGGCTCGCTCCACAATC +
Preference number: 4 (lower is better)
Translates to: YPLLLRSAASPEVCVPKSNISTI*WARSTI
Trigger: GATTGTGGAGCGAGCCCAGCAAATGGTGGAGATATT...AGACTTAGGGACACAGACTTCAGGTGAGGCTGCGGACCTCAGAAGCAGTGGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp CTCAGTTTTCCTGTCTGCACAACAGGTACTCCGATGCTCAGTGTGAGACTAGAGTGGGTCAGGGCCTGCTaGAGCTTCTCAACTTTCTCA +
Preference number: 4 (lower is better)
Translates to: LSFPVCTTGTPMLSVRLEWVRAC*SFSTFS
Trigger: TGAGAAAGTTGAGAAGCTGCAGCAGGCCCTGACCCA...CTCTAGTCTCACACTGAGCATCGGAGTACCTGTTGTGCAGACAGGAAAACTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp GTTTCCTGGAGTGCTGTCCTAAGTCTTCCCCAAACAGAGCAATGGAATTTGGAAGTCCCTCTCAGCTGCTaGAGTGGCTGCGGCATTCAT +
Preference number: 4 (lower is better)
Translates to: VSWSAVLSLPQTEQWNLEVPLSC*SGCGIH
Trigger: ATGAATGCCGCAGCCACTGCAGCAGCTGAGAGGGAC...TTCCAAATTCCATTGCTCTGTTTGGGGAAGACTTAGGACAGCACTCCAGGAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp AGACCCATTTGGCTGTATGGCCATGTACATCACCCCTCAATACAGACTGGCAATTGTCCCAGTAGCTGCTaGTATGGATGGAACGGAGCG +
Preference number: 4 (lower is better)
Translates to: RPIWLYGHVHHPSIQTGNCPSSC*YGWNGA
Trigger: CGCTCCGTTCCATCCATAGCAGCAGCTACTGGGACA...ATTGCCAGTCTGTATTGAGGGGTGATGTACATGGCCATACAGCCAAATGGGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp TCCCCAAACAGAGCAATGGAATTTGGAAATGTCAAGCTCCTTGCAAGACAGCCGGAGGCATGCTCATGGTaGTCCTTCCCCAGCAGCAAT +
Preference number: 4 (lower is better)
Translates to: SPNRAMEFGNVKLLARQPEACSW*SFPSSN
Trigger: ATTGCTGCTGGGGAAGGAGCACCATGAGCATGCCTC...CGGCTGTCTTGCAAGGAGCTTGACATTTCCAAATTCCATTGCTCTGTTTGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp ACTCAGGTCAATGGGGAGGAAGAATTTCCCATTCTCTCAGCACCTGGCATGAAGGATGCTTCTTCTCACTaGCACACTCACACTCACGGG +
Preference number: 4 (lower is better)
Translates to: TQVNGEEEFPILSAPGMKDASSH*HTHTHG
Trigger: CCCGTGAGTGTGAGTGTGGCAGTGAGAAGAAGCATC...CTTCATGCCAGGTGCTGAGAGAATGGGAAATTCTTCCTCCCCATTGACCTGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp ACTGCCAAGATGCAGTGCCGCATGTTAGAGGCTGTACAGCCAGGGTCTATGCCCAAATGTCAAGCTCCTTaGAAGACAGCCGATGTGAAA +
Preference number: 4 (lower is better)
Translates to: TAKMQCRMLEAVQPGSMPKCQAP*KTADVK
Trigger: TTTCACATCGGCTGTCTTGCAAGGAGCTTGACATTT...GGGCATAGACCCTGGCTGTACAGCCTCTAACATGCGGCACTGCATCTTGGCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp AGCATCAATATTTGCTGTGGGGGACAGGCAGTGTTCTTGGAATCCCCACACTGGCACCTAACACACTCCTaGCTCTTTTCCGTGGCACTT +
Preference number: 4 (lower is better)
Translates to: SINICCGGQAVFLESPHWHLTHS*LFSVAL
Trigger: AAGTGCCACGGAAAAGAGGCAGGAGTGTGTTAGGTG...CCAGTGTGGGGATTCCAAGAACACTGCCTGTCCCCCACAGCAAATATTGATGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp GTTTCCTGGAGTGCTGTCCTAAGTCTTCCCCAAACAGAGCAATGGAATTTGGAAGAAGGGCTCCACCACTaGCTGCTCTCCCAACGAAAG +
Preference number: 4 (lower is better)
Translates to: VSWSAVLSLPQTEQWNLEEGLHH*LLSQRK
Trigger: CTTTCGTTGGGAGAGCAGGCAGTGGTGGAGCCCTTC...TTCCAAATTCCATTGCTCTGTTTGGGGAAGACTTAGGACAGCACTCCAGGAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp AGCATCAATATTTGCTGTGGGGGACAGGCAGTGTTCTTGGAATCCCCACACTGGCTCAGCATAACTCCCTaGAGTCAAAACATGAGCCCC +
Preference number: 4 (lower is better)
Translates to: SINICCGGQAVFLESPHWLSITP*SQNMSP
Trigger: GGGGCTCATGTTTTGACTGCAGGGAGTTATGCTGAG...CCAGTGTGGGGATTCCAAGAACACTGCCTGTCCCCCACAGCAAATATTGATGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp TCACCTCAATTTGGGGAGGCTATAACTTCACCGGGGTTACACACCCAAGACCAGAAGTTGTTTGTAGGATaGGCTGGTCCTGCACTCCCT +
Preference number: 4 (lower is better)
Translates to: SPQFGEAITSPGLHTQDQKLFVG*AGPALP
Trigger: AGGGAGTGCAGGACCAGCCCATCCTACAAACAACTT...CTGGTCTTGGGTGTGTAACCCCGGTGAAGTTATAGCCTCCCCAAATTGAGGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp TATAATCAGGCTCCACTGGGAAAGTTTGAAGTCCAGGTCTCTGGGAAGTGCAGAACTGCGACTGTGCTTTaGCCTCCTCGTAAGTGGGCA +
Preference number: 4 (lower is better)
Translates to: YNQAPLGKFEVQVSGKCRTATVL*PPRKWA
Trigger: TGCCCACTTACGAGGAGGCCAAAGCACAGTCGCAGT...TCTGCACTTCCCAGAGACCTGGACTTCAAACTTTCCCAGTGGAGCCTGATTATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp CTTAAGAGGAGTGCAAGATCATTCAGAGAACACAGAGAAGCATGCTCCACTTACCTGAGCGAGCGGACGTaGCCCTGCTTCAGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: LKRSARSFREHREACSTYLSERT*PCFSSF
Trigger: GAAGGAACTGAAGCAGGGCCACGTCCGCTCGCTCAG...GTAAGTGGAGCATGCTTCTCTGTGTTCTCTGAATGATCTTGCACTCCTCTTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp AGCATCAATATTTGCTGTGGGGGACAGGCAGTGTTCTTGGAATCCCCACACTGGCTGGGTCTTGCTGACTaGGGACATCATTTGCTTGGT +
Preference number: 4 (lower is better)
Translates to: SINICCGGQAVFLESPHWLGLAD*GHHLLG
Trigger: ACCAAGCAAATGATGTCCCCAGTCAGCAAGACCCAG...CCAGTGTGGGGATTCCAAGAACACTGCCTGTCCCCCACAGCAAATATTGATGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp TTTACAATGAAAACACTTGGCAGCTCAGGGGGACCTCGAAGAGCAAGCAAGTCTGAACGGAAGTTGGCATaGGCGGCTCGTTACCCCATA +
Preference number: 4 (lower is better)
Translates to: FTMKTLGSSGGPRRASKSERKLA*AARYPI
Trigger: TATGGGGTAACGAGCCGCCCATGCCAACTTCCGTTC...AGACTTGCTTGCTCTTCGAGGTCCCCCTGAGCTGCCAAGTGTTTTCATTGTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp TATCCACTGCTTCTGAGGTCCGCAGCCTCACCTGAAGTCTGTGTCCCTAAGTCTTTTCCATGTTTCTGCTaGGTTCTCAGTGCATCCAGC +
Preference number: 4 (lower is better)
Translates to: YPLLLRSAASPEVCVPKSFPCFC*VLSASS
Trigger: GCTGGATGCACTGAGAACCCAGCAGAAACATGGAAA...AGACTTAGGGACACAGACTTCAGGTGAGGCTGCGGACCTCAGAAGCAGTGGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp ACTCAGGTCAATGGGGAGGAAGAATTTCCCATTCTCTCAGCACCTGGCATGAAGAAGTTCCAGGAGGGCTaGGGCATTGTATTCCGGCAT +
Preference number: 4 (lower is better)
Translates to: TQVNGEEEFPILSAPGMKKFQEG*GIVFRH
Trigger: ATGCCGGAATACAATGCCCCAGCCCTCCTGGAACTT...CTTCATGCCAGGTGCTGAGAGAATGGGAAATTCTTCCTCCCCATTGACCTGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp GCACAATCACATGTAAACACAACACCGGGCATCCAGACTTTGGGGGCTGATACACTGGTAAGAGAGGTCTaGCGAGAGTGTGTCCCAGTA +
Preference number: 4 (lower is better)
Translates to: AQSHVNTTPGIQTLGADTLVREV*RECVPV
Trigger: TACTGGGACACACTCTCGCCAGACCTCTCTTACCAG...TGTATCAGCCCCCAAAGTCTGGATGCCCGGTGTTGTGTTTACATGTGATTGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp GTTTCCTGGAGTGCTGTCCTAAGTCTTCCCCAAACAGAGCAATGGAATTTGGAATCACGGGACACCCCATaGTTGGCACAGGTGACACTG +
Preference number: 4 (lower is better)
Translates to: VSWSAVLSLPQTEQWNLESRDTP*LAQVTL
Trigger: CAGTGTCACCTGTGCCAACCATGGGGTGTCCCGTGA...TTCCAAATTCCATTGCTCTGTTTGGGGAAGACTTAGGACAGCACTCCAGGAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp AGCGATCCAGCTGACCTGGAGGTACAAAAACATCAGGACCCTGTAGGAGCATCTCCTGCCTCTTTTCCGTaGCACTTCTGTCTCACTTTG +
Preference number: 4 (lower is better)
Translates to: SDPADLEVQKHQDPVGASPASFP*HFCLTL
Trigger: CAAAGTGAGACAGAAGTGCCACGGAAAAGAGGCAGG...AGATGCTCCTACAGGGTCCTGATGTTTTTGTACCTCCAGGTCAGCTGGATCGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp TATAATCAGGCTCCACTGGGAAAGTTTGAAGTCCAGGTCTCTGGGAAGTGCAGAGGGCAATCAGGTGTCTaGGGCATGAAGACGAGGCTT +
Preference number: 4 (lower is better)
Translates to: YNQAPLGKFEVQVSGKCRGQSGV*GMKTRL
Trigger: AAGCCTCGTCTTCATGCCCCAGACACCTGATTGCCC...TCTGCACTTCCCAGAGACCTGGACTTCAAACTTTCCCAGTGGAGCCTGATTATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp GAAGCCCTGAAACATGGCGATGTGTCTGTTTACAATGAAAACACTTGGCAGCTCCTGGCTGCCAGCCTCTaGGAGGCAGAGAAAATGCTG +
Preference number: 4 (lower is better)
Translates to: EALKHGDVSVYNENTWQLLAASL*EAEKML
Trigger: CAGCATTTTCTCTGCCTCCCAGAGGCTGGCAGCCAG...GAGCTGCCAAGTGTTTTCATTGTAAACAGACACATCGCCATGTTTCAGGGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp TCACCTCAATTTGGGGAGGCTATAACTTCACCGGGGTTACACACCCAAGACCAGCGGGCATCCAGACTTTaGGGGCTGATACAAGAAAAC +
Preference number: 4 (lower is better)
Translates to: SPQFGEAITSPGLHTQDQRASRL*GLIQEN
Trigger: GTTTTCTTGTATCAGCCCCCAAAGTCTGGATGCCCG...CTGGTCTTGGGTGTGTAACCCCGGTGAAGTTATAGCCTCCCCAAATTGAGGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR CAA 72 bp GCAAAGGTGAAGCAGCCAGGAAGTCGGCACGTGGCTTaGTCCTACTGGTCACTATCAAACACAGTAGGAATG +
Preference number: 4 (lower is better)
Translates to: AKVKQPGSRHVA*SYWSLSNTVGM
Trigger: CATTCCTACTGTGTTTGATAGTGACCAGTAGGACAAAGCCACGTGCCGACTTCCTGGCTGCTTCACCTTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp AGCGATCCAGCTGACCTGGAGGTACAAAAACATCAGGACCCTGTAGGAGCATCTGTGGGTCTTCTTGAGTaGGGTTTTCCGTGGAAGAAA +
Preference number: 4 (lower is better)
Translates to: SDPADLEVQKHQDPVGASVGLLE*GFPWKK
Trigger: TTTCTTCCACGGAAAACCTCACTCAAGAAGACCCAC...AGATGCTCCTACAGGGTCCTGATGTTTTTGTACCTCCAGGTCAGCTGGATCGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp CGTGAAGCCAGGGCCTCTCCCCTTCATCCTGAGATAGGACCCTCAAGTTCTATAATTTGTGGGTCTTCTTaGGTGAGGTTTTCCGTGGAA +
Preference number: 4 (lower is better)
Translates to: REARASPLHPEIGPSSSIICGSS*VRFSVE
Trigger: TTCCACGGAAAACCTCACTCAAGAAGACCCACAAAT...TATAGAACTTGAGGGTCCTATCTCAGGATGAAGGGGAGAGGCCCTGGCTTCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp AGCGATCCAGCTGACCTGGAGGTACAAAAACATCAGGACCCTGTAGGAGCATCTGTCAGTGTTCTGTACTaGAATTCCACAGGGATGGCA +
Preference number: 4 (lower is better)
Translates to: SDPADLEVQKHQDPVGASVSVLY*NSTGMA
Trigger: TGCCATCCCTGTGGAATTTCAGTACAGAACACTGAC...AGATGCTCCTACAGGGTCCTGATGTTTTTGTACCTCCAGGTCAGCTGGATCGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp AGCGATCCAGCTGACCTGGAGGTACAAAAACATCAGGACCCTGTAGGAGCATCTAAACAGCGATCCAGCTaGCCTGGAGGTACAAAAACA +
Preference number: 4 (lower is better)
Translates to: SDPADLEVQKHQDPVGASKQRSS*PGGTKT
Trigger: TGTTTTTGTACCTCCAGGTCAGCTGGATCGCTGTTT...AGATGCTCCTACAGGGTCCTGATGTTTTTGTACCTCCAGGTCAGCTGGATCGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp GCACAATCACATGTAAACACAACACCGGGCATCCAGACTTTGGGGGCTGATACAAAGAGCAAGCAAGTCTaGCACCTGATTGGGGCAATC +
Preference number: 4 (lower is better)
Translates to: AQSHVNTTPGIQTLGADTKSKQV*HLIGAI
Trigger: GATTGCCCCAATCAGGTGTCAGACTTGCTTGCTCTT...TGTATCAGCCCCCAAAGTCTGGATGCCCGGTGTTGTGTTTACATGTGATTGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp TATAATCAGGCTCCACTGGGAAAGTTTGAAGTCCAGGTCTCTGGGAAGTGCAGACTCTCCCCTTCATCCTaGGATAGGACCCTCAAGTTC +
Preference number: 4 (lower is better)
Translates to: YNQAPLGKFEVQVSGKCRLSPSS*DRTLKF
Trigger: GAACTTGAGGGTCCTATCTCAGGATGAAGGGGAGAG...TCTGCACTTCCCAGAGACCTGGACTTCAAACTTTCCCAGTGGAGCCTGATTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp TCTGGGACTCAGGTCAATGGGGAGGAAGAATTTCCCATTCTCTCAGCACCTGGCAGTCAAACTCATACATaGGTTCCAAAGAGCAACCCC +
Preference number: 4 (lower is better)
Translates to: SGTQVNGEEEFPILSAPGSQTHT*VPKSNP
Trigger: GGGGTTGCTCTTTGGAACTCATGTATGAGTTTGACT...GCCAGGTGCTGAGAGAATGGGAAATTCTTCCTCCCCATTGACCTGAGTCCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp CTCAGTTTTCCTGTCTGCACAACAGGTACTCCGATGCTCAGTGTGAGACTAGAGCACTTTGAGAGGCTCTaGGGCCAAAGACTCATTCCA +
Preference number: 4 (lower is better)
Translates to: LSFPVCTTGTPMLSVRLEHFERL*GQRLIP
Trigger: TGGAATGAGTCTTTGGCCTCAGAGCCTCTCAAAGTG...CTCTAGTCTCACACTGAGCATCGGAGTACCTGTTGTGCAGACAGGAAAACTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp GAAGCCCTGAAACATGGCGATGTGTCTGTTTACAATGAAAACACTTGGCAGCTCAAACCCGACAACCGCTaGTGGGTCCTAGAGCTTCTC +
Preference number: 4 (lower is better)
Translates to: EALKHGDVSVYNENTWQLKPDNR*WVLELL
Trigger: GAGAAGCTCTAGGACCCAGCAGCGGTTGTCGGGTTT...GAGCTGCCAAGTGTTTTCATTGTAAACAGACACATCGCCATGTTTCAGGGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp CTTAAGAGGAGTGCAAGATCATTCAGAGAACACAGAGAAGCATGCTCCACTTACCTGACTGGTGCCCCCTaGCATGTAGTAACCATGGCC +
Preference number: 4 (lower is better)
Translates to: LKRSARSFREHREACSTYLTGAP*HVVTMA
Trigger: GGCCATGGTTACTACATGGCAGGGGGCACCAGTCAG...GTAAGTGGAGCATGCTTCTCTGTGTTCTCTGAATGATCTTGCACTCCTCTTAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp TCACCTCAATTTGGGGAGGCTATAACTTCACCGGGGTTACACACCCAAGACCAGACTGGGGACATCATTTaGTTGGTCTTGAAGGGGTAC +
Preference number: 4 (lower is better)
Translates to: SPQFGEAITSPGLHTQDQTGDII*LVLKGY
Trigger: GTACCCCTTCAAGACCAAGCAAATGATGTCCCCAGT...CTGGTCTTGGGTGTGTAACCCCGGTGAAGTTATAGCCTCCCCAAATTGAGGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp TATAATCAGGCTCCACTGGGAAAGTTTGAAGTCCAGGTCTCTGGGAAGTGCAGATTCTCGCTTCTCACATaGAGACTGCAGCTGGGTCAG +
Preference number: 4 (lower is better)
Translates to: YNQAPLGKFEVQVSGKCRFSLLT*RLQLGQ
Trigger: CTGACCCAGCTGCAGTCTGCATGTGAGAAGCGAGAA...TCTGCACTTCCCAGAGACCTGGACTTCAAACTTTCCCAGTGGAGCCTGATTATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp AGCATCAATATTTGCTGTGGGGGACAGGCAGTGTTCTTGGAATCCCCACACTGGCCATTTCCATGTTTCTaGTGGGTTCTCAGTGCATCC +
Preference number: 4 (lower is better)
Translates to: SINICCGGQAVFLESPHWPFPCF*WVLSAS
Trigger: GGATGCACTGAGAACCCAGCAGAAACATGGAAATGG...CCAGTGTGGGGATTCCAAGAACACTGCCTGTCCCCCACAGCAAATATTGATGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp CTCAGTTTTCCTGTCTGCACAACAGGTACTCCGATGCTCAGTGTGAGACTAGAGCAAAGTGTCGGATGGTaGTCTCCTCCAGGTACTTCT +
Preference number: 4 (lower is better)
Translates to: LSFPVCTTGTPMLSVRLEQSVGW*SPPGTS
Trigger: AGAAGTACCTGGAGGAGAGCACCATCCGACACTTTG...CTCTAGTCTCACACTGAGCATCGGAGTACCTGTTGTGCAGACAGGAAAACTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp TTTACAATGAAAACACTTGGCAGCTCAGGGGGACCTCGAAGAGCAAGCAAGTCTTCTTGTCAGTCTGTGTaGTGCTGTCCTTGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: FTMKTLGSSGGPRRASKSSCQSV*CCPCCL
Trigger: CAGGCAGCAAGGACAGCAGCACACAGACTGACAAGA...AGACTTGCTTGCTCTTCGAGGTCCCCCTGAGCTGCCAAGTGTTTTCATTGTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp ACTCAGGTCAATGGGGAGGAAGAATTTCCCATTCTCTCAGCACCTGGCATGAAGACCCACGGAATCTCCTaGCTCCTCAAAGCTTGCTTA +
Preference number: 4 (lower is better)
Translates to: TQVNGEEEFPILSAPGMKTHGIS*LLKACL
Trigger: TAAGCAAGCTTTGAGGAGGCAGGAGATTCCGTGGGT...CTTCATGCCAGGTGCTGAGAGAATGGGAAATTCTTCCTCCCCATTGACCTGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp TTTACAATGAAAACACTTGGCAGCTCAGGGGGACCTCGAAGAGCAAGCAAGTCTAGAGTAATGACTGGCTaGTCTGCACGGGGCATTCTG +
Preference number: 4 (lower is better)
Translates to: FTMKTLGSSGGPRRASKSRVMTG*SARGIL
Trigger: CAGAATGCCCCGTGCAGAGCAGCCAGTCATTACTCT...AGACTTGCTTGCTCTTCGAGGTCCCCCTGAGCTGCCAAGTGTTTTCATTGTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp TCACCTCAATTTGGGGAGGCTATAACTTCACCGGGGTTACACACCCAAGACCAGGAAATCGGGTGCCCATaGTTACCACTGTTTCACAGA +
Preference number: 4 (lower is better)
Translates to: SPQFGEAITSPGLHTQDQEIGCP*LPLFHR
Trigger: TCTGTGAAACAGTGGTAAGCATGGGCACCCGATTTC...CTGGTCTTGGGTGTGTAACCCCGGTGAAGTTATAGCCTCCCCAAATTGAGGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp AGCGATCCAGCTGACCTGGAGGTACAAAAACATCAGGACCCTGTAGGAGCATCTACAGCTGAAATCGGGTaGCCATGCTTACCACTGTTT +
Preference number: 4 (lower is better)
Translates to: SDPADLEVQKHQDPVGASTAEIG*PCLPLF
Trigger: AAACAGTGGTAAGCATGGGCACCCGATTTCAGCTGT...AGATGCTCCTACAGGGTCCTGATGTTTTTGTACCTCCAGGTCAGCTGGATCGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp CGTGAAGCCAGGGCCTCTCCCCTTCATCCTGAGATAGGACCCTCAAGTTCTATAATAGAGCTGAAAGTCTaGGGAAAAGTAGGTGGAGTC +
Preference number: 4 (lower is better)
Translates to: REARASPLHPEIGPSSSIIELKV*GKVGGV
Trigger: GACTCCACCTACTTTTCCCCAGACTTTCAGCTCTAT...TATAGAACTTGAGGGTCCTATCTCAGGATGAAGGGGAGAGGCCCTGGCTTCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433060.3
CDS-3UTR CCA 90 bp GCACAATCACATGTAAACACAACACCGGGCATCCAGACTTTGGGGGCTGATACATACCGCAGTTGTTCCTaGATCAGCCGCTGCAATACT +
Preference number: 4 (lower is better)
Translates to: AQSHVNTTPGIQTLGADTYRSCS*ISRCNT
Trigger: AGTATTGCAGCGGCTGATCCAGGAACAACTGCGGTA...TGTATCAGCCCCCAAAGTCTGGATGCCCGGTGTTGTGTTTACATGTGATTGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp CTGGAGTGCTGTCCTAAGTCTTCCCCAAACAGAGCAATGGAATTTGGAAATGTCCACATGAGGCGATCATaGCTAGTTCAGTCCCTCGGC +
Preference number: 4 (lower is better)
Translates to: LECCPKSSPNRAMEFGNVHMRRS*LVQSLG
Trigger: GCCGAGGGACTGAACTAGCCATGATCGCCTCATGTG...GACATTTCCAAATTCCATTGCTCTGTTTGGGGAAGACTTAGGACAGCACTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp AGACCCATTTGGCTGTATGGCCATGTACATCACCCCTCAATACAGACTGGCAATGGCTGTGCTGCTGCATaGTTGATGGGAACGGAAGTT +
Preference number: 4 (lower is better)
Translates to: RPIWLYGHVHHPSIQTGNGCAAA*LMGTEV
Trigger: AACTTCCGTTCCCATCAACCATGCAGCAGCACAGCC...ATTGCCAGTCTGTATTGAGGGGTGATGTACATGGCCATACAGCCAAATGGGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp TCCCCAAACAGAGCAATGGAATTTGGAAATGTCAAGCTCCTTGCAAGACAGCCGATCTCCACCATTTGCTaGGCTCGCTCCACAATCGCA +
Preference number: 4 (lower is better)
Translates to: SPNRAMEFGNVKLLARQPISTIC*ARSTIA
Trigger: TGCGATTGTGGAGCGAGCCCAGCAAATGGTGGAGAT...CGGCTGTCTTGCAAGGAGCTTGACATTTCCAAATTCCATTGCTCTGTTTGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp TATCCACTGCTTCTGAGGTCCGCAGCCTCACCTGAAGTCTGTGTCCCTAAGTCTCCAATTTGTTTCTCATaGCCTTGTCCAGCGATTCTC +
Preference number: 4 (lower is better)
Translates to: YPLLLRSAASPEVCVPKSPICFS*PCPAIL
Trigger: GAGAATCGCTGGACAAGGCCATGAGAAACAAATTGG...AGACTTAGGGACACAGACTTCAGGTGAGGCTGCGGACCTCAGAAGCAGTGGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp CGTGAAGCCAGGGCCTCTCCCCTTCATCCTGAGATAGGACCCTCAAGTTCTATACCAATTTGTTTCTCATaGCCTTGTCCAGCGATTCTC +
Preference number: 4 (lower is better)
Translates to: REARASPLHPEIGPSSSIPICFS*PCPAIL
Trigger: GAGAATCGCTGGACAAGGCCATGAGAAACAAATTGG...TATAGAACTTGAGGGTCCTATCTCAGGATGAAGGGGAGAGGCCCTGGCTTCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp TCCCCAAACAGAGCAATGGAATTTGGAAATGTCAAGCTCCTTGCAAGACAGCCGGCGTTGCTCAAAGCCTaGTCCAGGATCTCGATGTGT +
Preference number: 4 (lower is better)
Translates to: SPNRAMEFGNVKLLARQPALLKA*SRISMC
Trigger: ACACATCGAGATCCTGGACCAGGCTTTGAGCAACGC...CGGCTGTCTTGCAAGGAGCTTGACATTTCCAAATTCCATTGCTCTGTTTGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp CTGGAGTGCTGTCCTAAGTCTTCCCCAAACAGAGCAATGGAATTTGGAAATGTCTCTCAGCTGCTGCAGTaGCTGCGGCATTCATGGCAA +
Preference number: 4 (lower is better)
Translates to: LECCPKSSPNRAMEFGNVSQLLQ*LRHSWQ
Trigger: TTGCCATGAATGCCGCAGCCACTGCAGCAGCTGAGA...GACATTTCCAAATTCCATTGCTCTGTTTGGGGAAGACTTAGGACAGCACTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp AGACCCATTTGGCTGTATGGCCATGTACATCACCCCTCAATACAGACTGGCAATCTGCCATTCCGTGAGTaGTTGATGATCGTGGTGTCC +
Preference number: 4 (lower is better)
Translates to: RPIWLYGHVHHPSIQTGNLPFRE*LMIVVS
Trigger: GGACACCACGATCATCAACCACTCACGGAATGGCAG...ATTGCCAGTCTGTATTGAGGGGTGATGTACATGGCCATACAGCCAAATGGGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp GAAGCCCTGAAACATGGCGATGTGTCTGTTTACAATGAAAACACTTGGCAGCTCTCAGGCGACTTCCCATaGCCAGGAGAGTTCTCCAGT +
Preference number: 4 (lower is better)
Translates to: EALKHGDVSVYNENTWQLSGDFP*PGEFSS
Trigger: ACTGGAGAACTCTCCTGGCCATGGGAAGTCGCCTGA...GAGCTGCCAAGTGTTTTCATTGTAAACAGACACATCGCCATGTTTCAGGGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp GTTTCCTGGAGTGCTGTCCTAAGTCTTCCCCAAACAGAGCAATGGAATTTGGAACAGGAAGTCGGCACGTaGCTTTGTCCTACTGGTCAC +
Preference number: 4 (lower is better)
Translates to: VSWSAVLSLPQTEQWNLEQEVGT*LCPTGH
Trigger: GTGACCAGTAGGACAAAGCCACGTGCCGACTTCCTG...TTCCAAATTCCATTGCTCTGTTTGGGGAAGACTTAGGACAGCACTCCAGGAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp TCCCCAAACAGAGCAATGGAATTTGGAAATGTCAAGCTCCTTGCAAGACAGCCGAGTCTGACACCTGATTaGGGCAATCAGGTGTCTGGG +
Preference number: 4 (lower is better)
Translates to: SPNRAMEFGNVKLLARQPSLTPD*GNQVSG
Trigger: CCCAGACACCTGATTGCCCCAATCAGGTGTCAGACT...CGGCTGTCTTGCAAGGAGCTTGACATTTCCAAATTCCATTGCTCTGTTTGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp CTCAGTTTTCCTGTCTGCACAACAGGTACTCCGATGCTCAGTGTGAGACTAGAGTACAATGAAAACACTTaGCAGCTCAGGGGGACCTCG +
Preference number: 4 (lower is better)
Translates to: LSFPVCTTGTPMLSVRLEYNENT*QLRGTS
Trigger: CGAGGTCCCCCTGAGCTGCCAAGTGTTTTCATTGTA...CTCTAGTCTCACACTGAGCATCGGAGTACCTGTTGTGCAGACAGGAAAACTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp GCACAATCACATGTAAACACAACACCGGGCATCCAGACTTTGGGGGCTGATACAAACAAGAGTAATGACTaGCTGCTCTGCACGGGGCAT +
Preference number: 4 (lower is better)
Translates to: AQSHVNTTPGIQTLGADTNKSND*LLCTGH
Trigger: ATGCCCCGTGCAGAGCAGCCAGTCATTACTCTTGTT...TGTATCAGCCCCCAAAGTCTGGATGCCCGGTGTTGTGTTTACATGTGATTGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp TATAATCAGGCTCCACTGGGAAAGTTTGAAGTCCAGGTCTCTGGGAAGTGCAGAGTGTCCCTAAGTCTCTaGGACTCAGGTCAATGGGGA +
Preference number: 4 (lower is better)
Translates to: YNQAPLGKFEVQVSGKCRVSLSL*DSGQWG
Trigger: TCCCCATTGACCTGAGTCCCAGAGACTTAGGGACAC...TCTGCACTTCCCAGAGACCTGGACTTCAAACTTTCCCAGTGGAGCCTGATTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp ACTCAGGTCAATGGGGAGGAAGAATTTCCCATTCTCTCAGCACCTGGCATGAAGCCACTTACTCCAGCGTaGACACTGGTTTTGAACCCT +
Preference number: 4 (lower is better)
Translates to: TQVNGEEEFPILSAPGMKPLTPA*TLVLNP
Trigger: AGGGTTCAAAACCAGTGTCCACGCTGGAGTAAGTGG...CTTCATGCCAGGTGCTGAGAGAATGGGAAATTCTTCCTCCCCATTGACCTGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp AGACCCATTTGGCTGTATGGCCATGTACATCACCCCTCAATACAGACTGGCAATTTTGCCTATCTCCCATaGAGCCACACGTCAGAGGCA +
Preference number: 4 (lower is better)
Translates to: RPIWLYGHVHHPSIQTGNFAYLP*SHTSEA
Trigger: TGCCTCTGACGTGTGGCTCCATGGGAGATAGGCAAA...ATTGCCAGTCTGTATTGAGGGGTGATGTACATGGCCATACAGCCAAATGGGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp ACTCAGGTCAATGGGGAGGAAGAATTTCCCATTCTCTCAGCACCTGGCATGAAGTTGGAATCCCCACACTaGTACACAGACCCATTTGGC +
Preference number: 4 (lower is better)
Translates to: TQVNGEEEFPILSAPGMKLESPH*YTDPFG
Trigger: GCCAAATGGGTCTGTGTACCAGTGTGGGGATTCCAA...CTTCATGCCAGGTGCTGAGAGAATGGGAAATTCTTCCTCCCCATTGACCTGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp GCACAATCACATGTAAACACAACACCGGGCATCCAGACTTTGGGGGCTGATACAGACAGGCAGTGTTCTTaGAATCCCCACACTGGTACA +
Preference number: 4 (lower is better)
Translates to: AQSHVNTTPGIQTLGADTDRQCS*NPHTGT
Trigger: TGTACCAGTGTGGGGATTCCAAGAACACTGCCTGTC...TGTATCAGCCCCCAAAGTCTGGATGCCCGGTGTTGTGTTTACATGTGATTGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp CTTAAGAGGAGTGCAAGATCATTCAGAGAACACAGAGAAGCATGCTCCACTTACGTGCTGCTGCATGGTTaGTGGGAACGGAAGTTGGCA +
Preference number: 4 (lower is better)
Translates to: LKRSARSFREHREACSTYVLLHG*WERKLA
Trigger: TGCCAACTTCCGTTCCCATCAACCATGCAGCAGCAC...GTAAGTGGAGCATGCTTCTCTGTGTTCTCTGAATGATCTTGCACTCCTCTTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp AGCATCAATATTTGCTGTGGGGGACAGGCAGTGTTCTTGGAATCCCCACACTGGGGGGTATTCCAAGGATaGTCCACATTTGGGTTTATC +
Preference number: 4 (lower is better)
Translates to: SINICCGGQAVFLESPHWGVFQG*STFGFI
Trigger: GATAAACCCAAATGTGGATCATCCTTGGAATACCCC...CCAGTGTGGGGATTCCAAGAACACTGCCTGTCCCCCACAGCAAATATTGATGCT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp TATAATCAGGCTCCACTGGGAAAGTTTGAAGTCCAGGTCTCTGGGAAGTGCAGACATGGTTGGCACAGGTaGCACTGCATTATGCCAAGA +
Preference number: 4 (lower is better)
Translates to: YNQAPLGKFEVQVSGKCRHGWHR*HCIMPR
Trigger: TCTTGGCATAATGCAGTGTCACCTGTGCCAACCATG...TCTGCACTTCCCAGAGACCTGGACTTCAAACTTTCCCAGTGGAGCCTGATTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp AGCGATCCAGCTGACCTGGAGGTACAAAAACATCAGGACCCTGTAGGAGCATCTAAGCAGAGACAGAGATaGACTCAGAAGTTAGGATGG +
Preference number: 4 (lower is better)
Translates to: SDPADLEVQKHQDPVGASKQRQR*TQKLGW
Trigger: CCATCCTAACTTCTGAGTTCATCTCTGTCTCTGCTT...AGATGCTCCTACAGGGTCCTGATGTTTTTGTACCTCCAGGTCAGCTGGATCGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp CTTAAGAGGAGTGCAAGATCATTCAGAGAACACAGAGAAGCATGCTCCACTTACGTAGGAGCATCTCTCTaGTGGCCCGATGAGCTTCTC +
Preference number: 4 (lower is better)
Translates to: LKRSARSFREHREACSTYVGASL*WPDELL
Trigger: GAGAAGCTCATCGGGCCATCAGAGAGATGCTCCTAC...GTAAGTGGAGCATGCTTCTCTGTGTTCTCTGAATGATCTTGCACTCCTCTTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp TCACCTCAATTTGGGGAGGCTATAACTTCACCGGGGTTACACACCCAAGACCAGCTAACTCATCTCCTATaGAATGTGGTGGGAACAGAG +
Preference number: 4 (lower is better)
Translates to: SPQFGEAITSPGLHTQDQLTHLL*NVVGTE
Trigger: CTCTGTTCCCACCACATTTCATAGGAGATGAGTTAG...CTGGTCTTGGGTGTGTAACCCCGGTGAAGTTATAGCCTCCCCAAATTGAGGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp AGCATCAATATTTGCTGTGGGGGACAGGCAGTGTTCTTGGAATCCCCACACTGGAAAATACAATGCCGTTaGAGCCCTGAAACATGGCGA +
Preference number: 4 (lower is better)
Translates to: SINICCGGQAVFLESPHWKIQCR*SPETWR
Trigger: TCGCCATGTTTCAGGGCTTCAACGGCATTGTATTTT...CCAGTGTGGGGATTCCAAGAACACTGCCTGTCCCCCACAGCAAATATTGATGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp TATAATCAGGCTCCACTGGGAAAGTTTGAAGTCCAGGTCTCTGGGAAGTGCAGACAACGCAGTCAAGGGTaGAGCAGAACAATGCTGGAA +
Preference number: 4 (lower is better)
Translates to: YNQAPLGKFEVQVSGKCRQRSQG*SRTMLE
Trigger: TTCCAGCATTGTTCTGCTTCACCCTTGACTGCGTTG...TCTGCACTTCCCAGAGACCTGGACTTCAAACTTTCCCAGTGGAGCCTGATTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp CTCAGTTTTCCTGTCTGCACAACAGGTACTCCGATGCTCAGTGTGAGACTAGAGATGGTTAGAACATGCTaGACTCTGCAGTGTCACTGG +
Preference number: 4 (lower is better)
Translates to: LSFPVCTTGTPMLSVRLEMVRTC*TLQCHW
Trigger: CCAGTGACACTGCAGAGTTCAGCATGTTCTAACCAT...CTCTAGTCTCACACTGAGCATCGGAGTACCTGTTGTGCAGACAGGAAAACTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp AGCGATCCAGCTGACCTGGAGGTACAAAAACATCAGGACCCTGTAGGAGCATCTAGTCAAACTCATACATaGGTTCCAAAGAGCAACCCC +
Preference number: 4 (lower is better)
Translates to: SDPADLEVQKHQDPVGASSQTHT*VPKSNP
Trigger: GGGGTTGCTCTTTGGAACTCATGTATGAGTTTGACT...AGATGCTCCTACAGGGTCCTGATGTTTTTGTACCTCCAGGTCAGCTGGATCGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp CTTAAGAGGAGTGCAAGATCATTCAGAGAACACAGAGAAGCATGCTCCACTTACATTATCCACTGCTTCTaGGGTCCGCAGCCTCACCTG +
Preference number: 4 (lower is better)
Translates to: LKRSARSFREHREACSTYIIHCF*GPQPHL
Trigger: CAGGTGAGGCTGCGGACCTCAGAAGCAGTGGATAAT...GTAAGTGGAGCATGCTTCTCTGTGTTCTCTGAATGATCTTGCACTCCTCTTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp ACTGCCAAGATGCAGTGCCGCATGTTAGAGGCTGTACAGCCAGGGTCTATGCCCAGGAAAATCTTTGGCTaGCCAACAGCATCAATATTT +
Preference number: 4 (lower is better)
Translates to: TAKMQCRMLEAVQPGSMPRKIFG*PTASIF
Trigger: AAATATTGATGCTGTTGGTCAGCCAAAGATTTTCCT...GGGCATAGACCCTGGCTGTACAGCCTCTAACATGCGGCACTGCATCTTGGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp CTTAAGAGGAGTGCAAGATCATTCAGAGAACACAGAGAAGCATGCTCCACTTACGGGACTTCTGACTGGTaGCCCCTGCCATGTAGTAAC +
Preference number: 4 (lower is better)
Translates to: LKRSARSFREHREACSTYGTSDW*PLPCSN
Trigger: GTTACTACATGGCAGGGGGCACCAGTCAGAAGTCCC...GTAAGTGGAGCATGCTTCTCTGTGTTCTCTGAATGATCTTGCACTCCTCTTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp CTCAGTTTTCCTGTCTGCACAACAGGTACTCCGATGCTCAGTGTGAGACTAGAGTCCCTGCTGGATAGTTaGCTGTTAGCAGTCTCTAGT +
Preference number: 4 (lower is better)
Translates to: LSFPVCTTGTPMLSVRLESLLDS*LLAVSS
Trigger: ACTAGAGACTGCTAACAGGCAACTATCCAGCAGGGA...CTCTAGTCTCACACTGAGCATCGGAGTACCTGTTGTGCAGACAGGAAAACTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp TCCCCAAACAGAGCAATGGAATTTGGAAATGTCAAGCTCCTTGCAAGACAGCCGGCAGCTTTGTCTTCATaGCCTTCGTATTCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: SPNRAMEFGNVKLLARQPAALSS*PSYSLL
Trigger: CAGCAGGGAATACGAAGGGCATGAAGACAAAGCTGC...CGGCTGTCTTGCAAGGAGCTTGACATTTCCAAATTCCATTGCTCTGTTTGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp GTTTCCTGGAGTGCTGTCCTAAGTCTTCCCCAAACAGAGCAATGGAATTTGGAATTCTCGCTTCTCACATaGAGACTGCAGCTGGGTCAG +
Preference number: 4 (lower is better)
Translates to: VSWSAVLSLPQTEQWNLEFSLLT*RLQLGQ
Trigger: CTGACCCAGCTGCAGTCTGCATGTGAGAAGCGAGAA...TTCCAAATTCCATTGCTCTGTTTGGGGAAGACTTAGGACAGCACTCCAGGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp TTTACAATGAAAACACTTGGCAGCTCAGGGGGACCTCGAAGAGCAAGCAAGTCTCAAAGTGTCGGATGGTaGTCTCCTCCAGGTACTTCT +
Preference number: 4 (lower is better)
Translates to: FTMKTLGSSGGPRRASKSQSVGW*SPPGTS
Trigger: AGAAGTACCTGGAGGAGAGCACCATCCGACACTTTG...AGACTTGCTTGCTCTTCGAGGTCCCCCTGAGCTGCCAAGTGTTTTCATTGTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp TCACCTCAATTTGGGGAGGCTATAACTTCACCGGGGTTACACACCCAAGACCAGTTACGAGATCGCTGCTaGAGGACCTTAATCATAGCA +
Preference number: 4 (lower is better)
Translates to: SPQFGEAITSPGLHTQDQLRDRC*RTLIIA
Trigger: TGCTATGATTAAGGTCCTGCAGCAGCGATCTCGTAA...CTGGTCTTGGGTGTGTAACCCCGGTGAAGTTATAGCCTCCCCAAATTGAGGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp CTGGAGTGCTGTCCTAAGTCTTCCCCAAACAGAGCAATGGAATTTGGAAATGTCTCTTGTCAGTCTGTGTaGTGCTGTCCTTGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: LECCPKSSPNRAMEFGNVSCQSV*CCPCCL
Trigger: CAGGCAGCAAGGACAGCAGCACACAGACTGACAAGA...GACATTTCCAAATTCCATTGCTCTGTTTGGGGAAGACTTAGGACAGCACTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp AGACCCATTTGGCTGTATGGCCATGTACATCACCCCTCAATACAGACTGGCAATAATGAGGTTCGCAGCTaGAACCCAGCTATGCAAAGG +
Preference number: 4 (lower is better)
Translates to: RPIWLYGHVHHPSIQTGNNEVRS*NPAMQR
Trigger: CCTTTGCATAGCTGGGTTGCAGCTGCGAACCTCATT...ATTGCCAGTCTGTATTGAGGGGTGATGTACATGGCCATACAGCCAAATGGGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp ACTCAGGTCAATGGGGAGGAAGAATTTCCCATTCTCTCAGCACCTGGCATGAAGATCTGTTTCCTGGAGTaGTGTCCTAAGTCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: TQVNGEEEFPILSAPGMKICFLE*CPKSSP
Trigger: TGGGGAAGACTTAGGACAGCACTCCAGGAAACAGAT...CTTCATGCCAGGTGCTGAGAGAATGGGAAATTCTTCCTCCCCATTGACCTGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp CTCAGTTTTCCTGTCTGCACAACAGGTACTCCGATGCTCAGTGTGAGACTAGAGCTCAGTTTTCCTGTCTaGACAACAGGTACTCCGATG +
Preference number: 4 (lower is better)
Translates to: LSFPVCTTGTPMLSVRLELSFPV*TTGTPM
Trigger: CATCGGAGTACCTGTTGTGCAGACAGGAAAACTGAG...CTCTAGTCTCACACTGAGCATCGGAGTACCTGTTGTGCAGACAGGAAAACTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp AGACCCATTTGGCTGTATGGCCATGTACATCACCCCTCAATACAGACTGGCAATACTGCCAAGATGCAGTaGCGCATGTTAGAGGCTGTA +
Preference number: 4 (lower is better)
Translates to: RPIWLYGHVHHPSIQTGNTAKMQ*RMLEAV
Trigger: TACAGCCTCTAACATGCGGCACTGCATCTTGGCAGT...ATTGCCAGTCTGTATTGAGGGGTGATGTACATGGCCATACAGCCAAATGGGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp GTTTCCTGGAGTGCTGTCCTAAGTCTTCCCCAAACAGAGCAATGGAATTTGGAAGCAGCACACAGAAACTaGCAGACAACGCAGTCAAGG +
Preference number: 4 (lower is better)
Translates to: VSWSAVLSLPQTEQWNLEAAHRN*QTTQSR
Trigger: CCTTGACTGCGTTGTCTGGCAGTTTCTGTGTGCTGC...TTCCAAATTCCATTGCTCTGTTTGGGGAAGACTTAGGACAGCACTCCAGGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp CTGGAGTGCTGTCCTAAGTCTTCCCCAAACAGAGCAATGGAATTTGGAAATGTCGAACATGCTGAACTCTaGAGTGTCACTGGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: LECCPKSSPNRAMEFGNVEHAEL*SVTGCQ
Trigger: CTGGCAGCCAGTGACACTGCAGAGTTCAGCATGTTC...GACATTTCCAAATTCCATTGCTCTGTTTGGGGAAGACTTAGGACAGCACTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp GAAGCCCTGAAACATGGCGATGTGTCTGTTTACAATGAAAACACTTGGCAGCTCAGAGTAATGACTGGCTaGTCTGCACGGGGCATTCTG +
Preference number: 4 (lower is better)
Translates to: EALKHGDVSVYNENTWQLRVMTG*SARGIL
Trigger: CAGAATGCCCCGTGCAGAGCAGCCAGTCATTACTCT...GAGCTGCCAAGTGTTTTCATTGTAAACAGACACATCGCCATGTTTCAGGGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp TATAATCAGGCTCCACTGGGAAAGTTTGAAGTCCAGGTCTCTGGGAAGTGCAGACTCAGCATAACTCCCTaGAGTCAAAACATGAGCCCC +
Preference number: 4 (lower is better)
Translates to: YNQAPLGKFEVQVSGKCRLSITP*SQNMSP
Trigger: GGGGCTCATGTTTTGACTGCAGGGAGTTATGCTGAG...TCTGCACTTCCCAGAGACCTGGACTTCAAACTTTCCCAGTGGAGCCTGATTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp GCACAATCACATGTAAACACAACACCGGGCATCCAGACTTTGGGGGCTGATACAACACAATTCTGTAAGTaGTCATGGAGGAGGAGGCTC +
Preference number: 4 (lower is better)
Translates to: AQSHVNTTPGIQTLGADTTQFCK*SWRRRL
Trigger: GAGCCTCCTCCTCCATGAGCACTTACAGAATTGTGT...TGTATCAGCCCCCAAAGTCTGGATGCCCGGTGTTGTGTTTACATGTGATTGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp CTCAGTTTTCCTGTCTGCACAACAGGTACTCCGATGCTCAGTGTGAGACTAGAGAACAGCATCAATATTTaGTGTGGGGGACAGGCAGTG +
Preference number: 4 (lower is better)
Translates to: LSFPVCTTGTPMLSVRLENSINI*CGGQAV
Trigger: CACTGCCTGTCCCCCACAGCAAATATTGATGCTGTT...CTCTAGTCTCACACTGAGCATCGGAGTACCTGTTGTGCAGACAGGAAAACTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp AGCATCAATATTTGCTGTGGGGGACAGGCAGTGTTCTTGGAATCCCCACACTGGCTGGTAGACCATTTGTaGGTCTTCTTGAGTGAGGTT +
Preference number: 4 (lower is better)
Translates to: SINICCGGQAVFLESPHWLVDHL*VFLSEV
Trigger: AACCTCACTCAAGAAGACCCACAAATGGTCTACCAG...CCAGTGTGGGGATTCCAAGAACACTGCCTGTCCCCCACAGCAAATATTGATGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp GAAGCCCTGAAACATGGCGATGTGTCTGTTTACAATGAAAACACTTGGCAGCTCTGGCAAAGTGTCGGATaGTGCTCTCCTCCAGGTACT +
Preference number: 4 (lower is better)
Translates to: EALKHGDVSVYNENTWQLWQSVG*CSPPGT
Trigger: AGTACCTGGAGGAGAGCACCATCCGACACTTTGCCA...GAGCTGCCAAGTGTTTTCATTGTAAACAGACACATCGCCATGTTTCAGGGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp GTTTCCTGGAGTGCTGTCCTAAGTCTTCCCCAAACAGAGCAATGGAATTTGGAATGGCAAAGTGTCGGATaGTGCTCTCCTCCAGGTACT +
Preference number: 4 (lower is better)
Translates to: VSWSAVLSLPQTEQWNLEWQSVG*CSPPGT
Trigger: AGTACCTGGAGGAGAGCACCATCCGACACTTTGCCA...TTCCAAATTCCATTGCTCTGTTTGGGGAAGACTTAGGACAGCACTCCAGGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp AGCGATCCAGCTGACCTGGAGGTACAAAAACATCAGGACCCTGTAGGAGCATCTGAAATTCCACAGGGATaGCAGTTAGATGAGGACTTC +
Preference number: 4 (lower is better)
Translates to: SDPADLEVQKHQDPVGASEIPQG*QLDEDF
Trigger: GAAGTCCTCATCTAACTGCCATCCCTGTGGAATTTC...AGATGCTCCTACAGGGTCCTGATGTTTTTGTACCTCCAGGTCAGCTGGATCGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp ACTCAGGTCAATGGGGAGGAAGAATTTCCCATTCTCTCAGCACCTGGCATGAAGTTTATAATCAGAGAATaGGGGTACACAGGCCCTCCC +
Preference number: 4 (lower is better)
Translates to: TQVNGEEEFPILSAPGMKFIIRE*GYTGPP
Trigger: GGGAGGGCCTGTGTACCCCCATTCTCTGATTATAAA...CTTCATGCCAGGTGCTGAGAGAATGGGAAATTCTTCCTCCCCATTGACCTGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp AGCATCAATATTTGCTGTGGGGGACAGGCAGTGTTCTTGGAATCCCCACACTGGACTCAGAAGTTAGGATaGATGGGGACCGAGATCATA +
Preference number: 4 (lower is better)
Translates to: SINICCGGQAVFLESPHWTQKLG*MGTEII
Trigger: TATGATCTCGGTCCCCATCCATCCTAACTTCTGAGT...CCAGTGTGGGGATTCCAAGAACACTGCCTGTCCCCCACAGCAAATATTGATGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp TCCCCAAACAGAGCAATGGAATTTGGAAATGTCAAGCTCCTTGCAAGACAGCCGGCGATCCAGCTGACCTaGAGGTACAAAAACATCAGG +
Preference number: 4 (lower is better)
Translates to: SPNRAMEFGNVKLLARQPAIQLT*RYKNIR
Trigger: CCTGATGTTTTTGTACCTCCAGGTCAGCTGGATCGC...CGGCTGTCTTGCAAGGAGCTTGACATTTCCAAATTCCATTGCTCTGTTTGGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp GTTTCCTGGAGTGCTGTCCTAAGTCTTCCCCAAACAGAGCAATGGAATTTGGAAAGTCTGACACCTGATTaGGGCAATCAGGTGTCTGGG +
Preference number: 4 (lower is better)
Translates to: VSWSAVLSLPQTEQWNLESLTPD*GNQVSG
Trigger: CCCAGACACCTGATTGCCCCAATCAGGTGTCAGACT...TTCCAAATTCCATTGCTCTGTTTGGGGAAGACTTAGGACAGCACTCCAGGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp AGCGATCCAGCTGACCTGGAGGTACAAAAACATCAGGACCCTGTAGGAGCATCTAAGAATTTAGTGCCCTaGCTTGGCAGGAAATTTCCC +
Preference number: 4 (lower is better)
Translates to: SDPADLEVQKHQDPVGASKNLVP*LGRKFP
Trigger: GGGAAATTTCCTGCCAAGCCAGGGCACTAAATTCTT...AGATGCTCCTACAGGGTCCTGATGTTTTTGTACCTCCAGGTCAGCTGGATCGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp GAAGCCCTGAAACATGGCGATGTGTCTGTTTACAATGAAAACACTTGGCAGCTCCCTGCCCTGCGTGCATaGTTAGAACATGCTGAACTC +
Preference number: 4 (lower is better)
Translates to: EALKHGDVSVYNENTWQLPALRA*LEHAEL
Trigger: GAGTTCAGCATGTTCTAACCATGCACGCAGGGCAGG...GAGCTGCCAAGTGTTTTCATTGTAAACAGACACATCGCCATGTTTCAGGGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp TATCCACTGCTTCTGAGGTCCGCAGCCTCACCTGAAGTCTGTGTCCCTAAGTCTTTGTTGCAACTGTTTTaGTATCCATGCCAAGCCTTG +
Preference number: 4 (lower is better)
Translates to: YPLLLRSAASPEVCVPKSLLQLF*YPCQAL
Trigger: CAAGGCTTGGCATGGATACCAAAACAGTTGCAACAA...AGACTTAGGGACACAGACTTCAGGTGAGGCTGCGGACCTCAGAAGCAGTGGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp AGACCCATTTGGCTGTATGGCCATGTACATCACCCCTCAATACAGACTGGCAATACCCATTTGGCTGTATaGCCATGTACATCACCCCTC +
Preference number: 4 (lower is better)
Translates to: RPIWLYGHVHHPSIQTGNTHLAV*PCTSPL
Trigger: GAGGGGTGATGTACATGGCCATACAGCCAAATGGGT...ATTGCCAGTCTGTATTGAGGGGTGATGTACATGGCCATACAGCCAAATGGGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp AGACCCATTTGGCTGTATGGCCATGTACATCACCCCTCAATACAGACTGGCAATCAACAACTTTTTCCCTaGTGCTACTGGTTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: RPIWLYGHVHHPSIQTGNQQLFP*CYWLPP
Trigger: TGGAGGCAACCAGTAGCATCAGGGAAAAAGTTGTTG...ATTGCCAGTCTGTATTGAGGGGTGATGTACATGGCCATACAGCCAAATGGGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433060.3
CDS-3UTR TCA 90 bp AGACCCATTTGGCTGTATGGCCATGTACATCACCCCTCAATACAGACTGGCAATTCTCATTTCCACCTCTaGGATCCTCAGGAAGTTTGG +
Preference number: 4 (lower is better)
Translates to: RPIWLYGHVHHPSIQTGNSHFHL*DPQEVW
Trigger: CCAAACTTCCTGAGGATCTCAGAGGTGGAAATGAGA...ATTGCCAGTCTGTATTGAGGGGTGATGTACATGGCCATACAGCCAAATGGGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp CTTAAGAGGAGTGCAAGATCATTCAGAGAACACAGAGAAGCATGCTCCACTTACGTAGCTGCCATTCCGTaGGTGGTTGATGATCGTGGT +
Preference number: 4 (lower is better)
Translates to: LKRSARSFREHREACSTYVAAIP*VVDDRG
Trigger: ACCACGATCATCAACCACTCACGGAATGGCAGCTAC...GTAAGTGGAGCATGCTTCTCTGTGTTCTCTGAATGATCTTGCACTCCTCTTAAG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp CTTAAGAGGAGTGCAAGATCATTCAGAGAACACAGAGAAGCATGCTCCACTTACGTGTATTCCATGTCCTaGCACCTTCTGTTGGCCTGC +
Preference number: 4 (lower is better)
Translates to: LKRSARSFREHREACSTYVYSMS*HLLLAC
Trigger: GCAGGCCAACAGAAGGTGTCAGGACATGGAATACAC...GTAAGTGGAGCATGCTTCTCTGTGTTCTCTGAATGATCTTGCACTCCTCTTAAG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp GAAGCCCTGAAACATGGCGATGTGTCTGTTTACAATGAAAACACTTGGCAGCTCGGGATGGCAGTTAGATaGGGACTTCCATCATCTCTC +
Preference number: 4 (lower is better)
Translates to: EALKHGDVSVYNENTWQLGMAVR*GLPSSL
Trigger: GAGAGATGATGGAAGTCCTCATCTAACTGCCATCCC...GAGCTGCCAAGTGTTTTCATTGTAAACAGACACATCGCCATGTTTCAGGGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp AGACCCATTTGGCTGTATGGCCATGTACATCACCCCTCAATACAGACTGGCAATGTCAGTGTTCTGTACTaGAATTCCACAGGGATGGCA +
Preference number: 4 (lower is better)
Translates to: RPIWLYGHVHHPSIQTGNVSVLY*NSTGMA
Trigger: TGCCATCCCTGTGGAATTTCAGTACAGAACACTGAC...ATTGCCAGTCTGTATTGAGGGGTGATGTACATGGCCATACAGCCAAATGGGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp TTTACAATGAAAACACTTGGCAGCTCAGGGGGACCTCGAAGAGCAAGCAAGTCTAAACAGCGATCCAGCTaGCCTGGAGGTACAAAAACA +
Preference number: 4 (lower is better)
Translates to: FTMKTLGSSGGPRRASKSKQRSS*PGGTKT
Trigger: TGTTTTTGTACCTCCAGGTCAGCTGGATCGCTGTTT...AGACTTGCTTGCTCTTCGAGGTCCCCCTGAGCTGCCAAGTGTTTTCATTGTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp CTGGAGTGCTGTCCTAAGTCTTCCCCAAACAGAGCAATGGAATTTGGAAATGTCGTGTATGCAGAGATGTaGACACATAGGAGGCATGGC +
Preference number: 4 (lower is better)
Translates to: LECCPKSSPNRAMEFGNVVYAEM*THRRHG
Trigger: GCCATGCCTCCTATGTGTTCACATCTCTGCATACAC...GACATTTCCAAATTCCATTGCTCTGTTTGGGGAAGACTTAGGACAGCACTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp TATAATCAGGCTCCACTGGGAAAGTTTGAAGTCCAGGTCTCTGGGAAGTGCAGATCCCTGCTGGATAGTTaGCTGTTAGCAGTCTCTAGT +
Preference number: 4 (lower is better)
Translates to: YNQAPLGKFEVQVSGKCRSLLDS*LLAVSS
Trigger: ACTAGAGACTGCTAACAGGCAACTATCCAGCAGGGA...TCTGCACTTCCCAGAGACCTGGACTTCAAACTTTCCCAGTGGAGCCTGATTATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp GTTTCCTGGAGTGCTGTCCTAAGTCTTCCCCAAACAGAGCAATGGAATTTGGAAGCAGCTTTGTCTTCATaGCCTTCGTATTCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: VSWSAVLSLPQTEQWNLEAALSS*PSYSLL
Trigger: CAGCAGGGAATACGAAGGGCATGAAGACAAAGCTGC...TTCCAAATTCCATTGCTCTGTTTGGGGAAGACTTAGGACAGCACTCCAGGAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp GTTTCCTGGAGTGCTGTCCTAAGTCTTCCCCAAACAGAGCAATGGAATTTGGAAAGCATAATGCCCCTCTaGAGCTTTGTCTTCATGCCC +
Preference number: 4 (lower is better)
Translates to: VSWSAVLSLPQTEQWNLESIMPL*SFVFMP
Trigger: GGGCATGAAGACAAAGCTGCAGAGGGGCATTATGCT...TTCCAAATTCCATTGCTCTGTTTGGGGAAGACTTAGGACAGCACTCCAGGAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp CGTGAAGCCAGGGCCTCTCCCCTTCATCCTGAGATAGGACCCTCAAGTTCTATATTCTCAACATATGCTTaGTTCTCTCGTAACTCCTCT +
Preference number: 4 (lower is better)
Translates to: REARASPLHPEIGPSSSIFSTYA*FSRNSS
Trigger: AGAGGAGTTACGAGAGAAGCAAGCATATGTTGAGAA...TATAGAACTTGAGGGTCCTATCTCAGGATGAAGGGGAGAGGCCCTGGCTTCACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp GAAGCCCTGAAACATGGCGATGTGTCTGTTTACAATGAAAACACTTGGCAGCTCAATGAGGTTCGCAGCTaGAACCCAGCTATGCAAAGG +
Preference number: 4 (lower is better)
Translates to: EALKHGDVSVYNENTWQLNEVRS*NPAMQR
Trigger: CCTTTGCATAGCTGGGTTGCAGCTGCGAACCTCATT...GAGCTGCCAAGTGTTTTCATTGTAAACAGACACATCGCCATGTTTCAGGGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp TCACCTCAATTTGGGGAGGCTATAACTTCACCGGGGTTACACACCCAAGACCAGAAATGTCAAGCTCCTTaGAAGACAGCCGATGTGAAA +
Preference number: 4 (lower is better)
Translates to: SPQFGEAITSPGLHTQDQKCQAP*KTADVK
Trigger: TTTCACATCGGCTGTCTTGCAAGGAGCTTGACATTT...CTGGTCTTGGGTGTGTAACCCCGGTGAAGTTATAGCCTCCCCAAATTGAGGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp GCACAATCACATGTAAACACAACACCGGGCATCCAGACTTTGGGGGCTGATACAAGGGTCTATGCCCAGTaGCTCTCCAAACTTTGTTTT +
Preference number: 4 (lower is better)
Translates to: AQSHVNTTPGIQTLGADTRVYAQ*LSKLCF
Trigger: AAAACAAAGTTTGGAGAGGCACTGGGCATAGACCCT...TGTATCAGCCCCCAAAGTCTGGATGCCCGGTGTTGTGTTTACATGTGATTGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp TCTGGGACTCAGGTCAATGGGGAGGAAGAATTTCCCATTCTCTCAGCACCTGGCAAAGGGTTCTGCACATaGTCTGAAAGTTTTGGAAGA +
Preference number: 4 (lower is better)
Translates to: SGTQVNGEEEFPILSAPGKGFCT*SESFGR
Trigger: TCTTCCAAAACTTTCAGAGCATGTGCAGAACCCTTT...GCCAGGTGCTGAGAGAATGGGAAATTCTTCCTCCCCATTGACCTGAGTCCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp ACTCAGGTCAATGGGGAGGAAGAATTTCCCATTCTCTCAGCACCTGGCATGAAGCTGTTTTGGTATCCATaGCAAGCCTTGTGGAGTCAA +
Preference number: 4 (lower is better)
Translates to: TQVNGEEEFPILSAPGMKLFWYP*QALWSQ
Trigger: TTGACTCCACAAGGCTTGGCATGGATACCAAAACAG...CTTCATGCCAGGTGCTGAGAGAATGGGAAATTCTTCCTCCCCATTGACCTGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp GAAGCCCTGAAACATGGCGATGTGTCTGTTTACAATGAAAACACTTGGCAGCTCGAACACAGAGAAGCATaGTCCACTTACTCCAGCGTG +
Preference number: 4 (lower is better)
Translates to: EALKHGDVSVYNENTWQLEHREA*STYSSV
Trigger: CACGCTGGAGTAAGTGGAGCATGCTTCTCTGTGTTC...GAGCTGCCAAGTGTTTTCATTGTAAACAGACACATCGCCATGTTTCAGGGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp TTTACAATGAAAACACTTGGCAGCTCAGGGGGACCTCGAAGAGCAAGCAAGTCTAACAGCATCAATATTTaGTGTGGGGGACAGGCAGTG +
Preference number: 4 (lower is better)
Translates to: FTMKTLGSSGGPRRASKSNSINI*CGGQAV
Trigger: CACTGCCTGTCCCCCACAGCAAATATTGATGCTGTT...AGACTTGCTTGCTCTTCGAGGTCCCCCTGAGCTGCCAAGTGTTTTCATTGTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp CTGGAGTGCTGTCCTAAGTCTTCCCCAAACAGAGCAATGGAATTTGGAAATGTCTACCGCAGTTGTTCCTaGATCAGCCGCTGCAATACT +
Preference number: 4 (lower is better)
Translates to: LECCPKSSPNRAMEFGNVYRSCS*ISRCNT
Trigger: AGTATTGCAGCGGCTGATCCAGGAACAACTGCGGTA...GACATTTCCAAATTCCATTGCTCTGTTTGGGGAAGACTTAGGACAGCACTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp CTTAAGAGGAGTGCAAGATCATTCAGAGAACACAGAGAAGCATGCTCCACTTACGTTCATGTTCTCGGTTaGGGTGCCATACCGCAGTTG +
Preference number: 4 (lower is better)
Translates to: LKRSARSFREHREACSTYVHVLG*GAIPQL
Trigger: CAACTGCGGTATGGCACCCCAACCGAGAACATGAAC...GTAAGTGGAGCATGCTTCTCTGTGTTCTCTGAATGATCTTGCACTCCTCTTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp GAAGCCCTGAAACATGGCGATGTGTCTGTTTACAATGAAAACACTTGGCAGCTCTGGCCTGGTGCTGAATaGCCAGCAAGTTCATGTTCT +
Preference number: 4 (lower is better)
Translates to: EALKHGDVSVYNENTWQLWPGAE*PASSCS
Trigger: AGAACATGAACTTGCTGGCCATTCAGCACCAGGCCA...GAGCTGCCAAGTGTTTTCATTGTAAACAGACACATCGCCATGTTTCAGGGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp GAAGCCCTGAAACATGGCGATGTGTCTGTTTACAATGAAAACACTTGGCAGCTCCTGGGTCTTGCTGACTaGGGACATCATTTGCTTGGT +
Preference number: 4 (lower is better)
Translates to: EALKHGDVSVYNENTWQLLGLAD*GHHLLG
Trigger: ACCAAGCAAATGATGTCCCCAGTCAGCAAGACCCAG...GAGCTGCCAAGTGTTTTCATTGTAAACAGACACATCGCCATGTTTCAGGGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp CTTAAGAGGAGTGCAAGATCATTCAGAGAACACAGAGAAGCATGCTCCACTTACGCGTTGCTCAAAGCCTaGTCCAGGATCTCGATGTGT +
Preference number: 4 (lower is better)
Translates to: LKRSARSFREHREACSTYALLKA*SRISMC
Trigger: ACACATCGAGATCCTGGACCAGGCTTTGAGCAACGC...GTAAGTGGAGCATGCTTCTCTGTGTTCTCTGAATGATCTTGCACTCCTCTTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp TTTACAATGAAAACACTTGGCAGCTCAGGGGGACCTCGAAGAGCAAGCAAGTCTTTTCCATGTTTCTGCTaGGTTCTCAGTGCATCCAGC +
Preference number: 4 (lower is better)
Translates to: FTMKTLGSSGGPRRASKSFPCFC*VLSASS
Trigger: GCTGGATGCACTGAGAACCCAGCAGAAACATGGAAA...AGACTTGCTTGCTCTTCGAGGTCCCCCTGAGCTGCCAAGTGTTTTCATTGTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp CTTAAGAGGAGTGCAAGATCATTCAGAGAACACAGAGAAGCATGCTCCACTTACGGCATGTTGGCTGGCTaGCCATTTCCATGTTTCTGC +
Preference number: 4 (lower is better)
Translates to: LKRSARSFREHREACSTYGMLAG*PFPCFC
Trigger: GCAGAAACATGGAAATGGCCAGCCAGCCAACATGCC...GTAAGTGGAGCATGCTTCTCTGTGTTCTCTGAATGATCTTGCACTCCTCTTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp AGCGATCCAGCTGACCTGGAGGTACAAAAACATCAGGACCCTGTAGGAGCATCTGTGGCTTTGTCCTACTaGTCACTATCAAACACAGTA +
Preference number: 4 (lower is better)
Translates to: SDPADLEVQKHQDPVGASVALSY*SLSNTV
Trigger: TACTGTGTTTGATAGTGACCAGTAGGACAAAGCCAC...AGATGCTCCTACAGGGTCCTGATGTTTTTGTACCTCCAGGTCAGCTGGATCGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp CTCAGTTTTCCTGTCTGCACAACAGGTACTCCGATGCTCAGTGTGAGACTAGAGTCTGTCACCTCAATTTaGGGAGGCTATAACTTCACC +
Preference number: 4 (lower is better)
Translates to: LSFPVCTTGTPMLSVRLESVTSI*GGYNFT
Trigger: GGTGAAGTTATAGCCTCCCCAAATTGAGGTGACAGA...CTCTAGTCTCACACTGAGCATCGGAGTACCTGTTGTGCAGACAGGAAAACTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp AGCGATCCAGCTGACCTGGAGGTACAAAAACATCAGGACCCTGTAGGAGCATCTTCCTATGAAATGTGGTaGGAACAGAGATTAGGAAGG +
Preference number: 4 (lower is better)
Translates to: SDPADLEVQKHQDPVGASSYEMW*EQRLGR
Trigger: CCTTCCTAATCTCTGTTCCCACCACATTTCATAGGA...AGATGCTCCTACAGGGTCCTGATGTTTTTGTACCTCCAGGTCAGCTGGATCGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp CTGGAGTGCTGTCCTAAGTCTTCCCCAAACAGAGCAATGGAATTTGGAAATGTCTACAATGAAAACACTTaGCAGCTCAGGGGGACCTCG +
Preference number: 4 (lower is better)
Translates to: LECCPKSSPNRAMEFGNVYNENT*QLRGTS
Trigger: CGAGGTCCCCCTGAGCTGCCAAGTGTTTTCATTGTA...GACATTTCCAAATTCCATTGCTCTGTTTGGGGAAGACTTAGGACAGCACTCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp AGCGATCCAGCTGACCTGGAGGTACAAAAACATCAGGACCCTGTAGGAGCATCTGAGCTGTGCTTCTGGTaGAACACAATAATTTCCATC +
Preference number: 4 (lower is better)
Translates to: SDPADLEVQKHQDPVGASELCFW*NTIISI
Trigger: GATGGAAATTATTGTGTTCCACCAGAAGCACAGCTC...AGATGCTCCTACAGGGTCCTGATGTTTTTGTACCTCCAGGTCAGCTGGATCGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp TATCCACTGCTTCTGAGGTCCGCAGCCTCACCTGAAGTCTGTGTCCCTAAGTCTTTTTTAGGTATAGTTTaGAGCTGTGCTTCTGGTGGA +
Preference number: 4 (lower is better)
Translates to: YPLLLRSAASPEVCVPKSFLGIV*SCASGG
Trigger: TCCACCAGAAGCACAGCTCCAAACTATACCTAAAAA...AGACTTAGGGACACAGACTTCAGGTGAGGCTGCGGACCTCAGAAGCAGTGGATA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp AGCATCAATATTTGCTGTGGGGGACAGGCAGTGTTCTTGGAATCCCCACACTGGTCTCTGTTGAAATCATaGAGTCTTCTAATCTCGCCT +
Preference number: 4 (lower is better)
Translates to: SINICCGGQAVFLESPHWSLLKS*SLLISP
Trigger: AGGCGAGATTAGAAGACTTCATGATTTCAACAGAGA...CCAGTGTGGGGATTCCAAGAACACTGCCTGTCCCCCACAGCAAATATTGATGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp GCACAATCACATGTAAACACAACACCGGGCATCCAGACTTTGGGGGCTGATACAAGCCCAATCATCTCTTaGAAATCCAAACCAAACAGG +
Preference number: 4 (lower is better)
Translates to: AQSHVNTTPGIQTLGADTSPIIS*KSKPNR
Trigger: CCTGTTTGGTTTGGATTTTCAAGAGATGATTGGGCT...TGTATCAGCCCCCAAAGTCTGGATGCCCGGTGTTGTGTTTACATGTGATTGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp TTTACAATGAAAACACTTGGCAGCTCAGGGGGACCTCGAAGAGCAAGCAAGTCTCTAACTCATCTCCTATaGAATGTGGTGGGAACAGAG +
Preference number: 4 (lower is better)
Translates to: FTMKTLGSSGGPRRASKSLTHLL*NVVGTE
Trigger: CTCTGTTCCCACCACATTTCATAGGAGATGAGTTAG...AGACTTGCTTGCTCTTCGAGGTCCCCCTGAGCTGCCAAGTGTTTTCATTGTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp GCACAATCACATGTAAACACAACACCGGGCATCCAGACTTTGGGGGCTGATACATGTGTCTGTTTACAATaGAAACACTTGGCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: AQSHVNTTPGIQTLGADTCVCLQ*KHLAAQ
Trigger: CTGAGCTGCCAAGTGTTTTCATTGTAAACAGACACA...TGTATCAGCCCCCAAAGTCTGGATGCCCGGTGTTGTGTTTACATGTGATTGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp TCTGGGACTCAGGTCAATGGGGAGGAAGAATTTCCCATTCTCTCAGCACCTGGCCCATTTCCTCATCAGTaGAATCAGAATAATAAACGC +
Preference number: 4 (lower is better)
Translates to: SGTQVNGEEEFPILSAPGPFPHQ*NQNNKR
Trigger: GCGTTTATTATTCTGATTTCACTGATGAGGAAATGG...GCCAGGTGCTGAGAGAATGGGAAATTCTTCCTCCCCATTGACCTGAGTCCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp TCACCTCAATTTGGGGAGGCTATAACTTCACCGGGGTTACACACCCAAGACCAGGTTCTGCACATGCTCTaGAAGTTTTGGAAGATAATG +
Preference number: 4 (lower is better)
Translates to: SPQFGEAITSPGLHTQDQVLHML*KFWKIM
Trigger: CATTATCTTCCAAAACTTTCAGAGCATGTGCAGAAC...CTGGTCTTGGGTGTGTAACCCCGGTGAAGTTATAGCCTCCCCAAATTGAGGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp CTGGAGTGCTGTCCTAAGTCTTCCCCAAACAGAGCAATGGAATTTGGAAATGTCTTAAGGAGGGCGGGGTaGGATGAACACTTTGATCTT +
Preference number: 4 (lower is better)
Translates to: LECCPKSSPNRAMEFGNVLRRAG*DEHFDL
Trigger: AAGATCAAAGTGTTCATCTCACCCCGCCCTCCTTAA...GACATTTCCAAATTCCATTGCTCTGTTTGGGGAAGACTTAGGACAGCACTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp GAAGCCCTGAAACATGGCGATGTGTCTGTTTACAATGAAAACACTTGGCAGCTCCCAGACTTTGGGGGCTaGTACAAGAAAACGCTGTAT +
Preference number: 4 (lower is better)
Translates to: EALKHGDVSVYNENTWQLPDFGG*YKKTLY
Trigger: ATACAGCGTTTTCTTGTATCAGCCCCCAAAGTCTGG...GAGCTGCCAAGTGTTTTCATTGTAAACAGACACATCGCCATGTTTCAGGGCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp ACTCAGGTCAATGGGGAGGAAGAATTTCCCATTCTCTCAGCACCTGGCATGAAGTACAGACTGGCAATATaGAGACGTCAAACGTTACAG +
Preference number: 4 (lower is better)
Translates to: TQVNGEEEFPILSAPGMKYRLAI*RRQTLQ
Trigger: CTGTAACGTTTGACGTCTTCATATTGCCAGTCTGTA...CTTCATGCCAGGTGCTGAGAGAATGGGAAATTCTTCCTCCCCATTGACCTGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp CTGGAGTGCTGTCCTAAGTCTTCCCCAAACAGAGCAATGGAATTTGGAAATGTCAATATCTCCACCATTTaGTGGGCTCGCTCCACAATC +
Preference number: 4 (lower is better)
Translates to: LECCPKSSPNRAMEFGNVNISTI*WARSTI
Trigger: GATTGTGGAGCGAGCCCAGCAAATGGTGGAGATATT...GACATTTCCAAATTCCATTGCTCTGTTTGGGGAAGACTTAGGACAGCACTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp ACTCAGGTCAATGGGGAGGAAGAATTTCCCATTCTCTCAGCACCTGGCATGAAGTCTTTACGAGATCGCTaGTGCAGGACCTTAATCATA +
Preference number: 4 (lower is better)
Translates to: TQVNGEEEFPILSAPGMKSLRDR*CRTLII
Trigger: TATGATTAAGGTCCTGCAGCAGCGATCTCGTAAAGA...CTTCATGCCAGGTGCTGAGAGAATGGGAAATTCTTCCTCCCCATTGACCTGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp CGTGAAGCCAGGGCCTCTCCCCTTCATCCTGAGATAGGACCCTCAAGTTCTATATTTCTTAACTTTGTTTaGAAACCTACACGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: REARASPLHPEIGPSSSIFLNFV*KPTRLF
Trigger: GAAGAGGCGTGTAGGTTTGCAAACAAAGTTAAGAAA...TATAGAACTTGAGGGTCCTATCTCAGGATGAAGGGGAGAGGCCCTGGCTTCACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp ACTCAGGTCAATGGGGAGGAAGAATTTCCCATTCTCTCAGCACCTGGCATGAAGTGCCTCCTCAAAGCTTaGTTAGTTCACAGTCAGAAT +
Preference number: 4 (lower is better)
Translates to: TQVNGEEEFPILSAPGMKCLLKA*LVHSQN
Trigger: ATTCTGACTGTGAACTAAGCAAGCTTTGAGGAGGCA...CTTCATGCCAGGTGCTGAGAGAATGGGAAATTCTTCCTCCCCATTGACCTGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp GCACAATCACATGTAAACACAACACCGGGCATCCAGACTTTGGGGGCTGATACATGCCTCCTCAAAGCTTaGTTAGTTCACAGTCAGAAT +
Preference number: 4 (lower is better)
Translates to: AQSHVNTTPGIQTLGADTCLLKA*LVHSQN
Trigger: ATTCTGACTGTGAACTAAGCAAGCTTTGAGGAGGCA...TGTATCAGCCCCCAAAGTCTGGATGCCCGGTGTTGTGTTTACATGTGATTGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp CTGGAGTGCTGTCCTAAGTCTTCCCCAAACAGAGCAATGGAATTTGGAAATGTCATCTGTTTCCTGGAGTaGTGTCCTAAGTCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: LECCPKSSPNRAMEFGNVICFLE*CPKSSP
Trigger: TGGGGAAGACTTAGGACAGCACTCCAGGAAACAGAT...GACATTTCCAAATTCCATTGCTCTGTTTGGGGAAGACTTAGGACAGCACTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp AGACCCATTTGGCTGTATGGCCATGTACATCACCCCTCAATACAGACTGGCAATAGGGTCTATGCCCAGTaGCTCTCCAAACTTTGTTTT +
Preference number: 4 (lower is better)
Translates to: RPIWLYGHVHHPSIQTGNRVYAQ*LSKLCF
Trigger: AAAACAAAGTTTGGAGAGGCACTGGGCATAGACCCT...ATTGCCAGTCTGTATTGAGGGGTGATGTACATGGCCATACAGCCAAATGGGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp TCCCCAAACAGAGCAATGGAATTTGGAAATGTCAAGCTCCTTGCAAGACAGCCGCTGTTTTGGTATCCATaGCAAGCCTTGTGGAGTCAA +
Preference number: 4 (lower is better)
Translates to: SPNRAMEFGNVKLLARQPLFWYP*QALWSQ
Trigger: TTGACTCCACAAGGCTTGGCATGGATACCAAAACAG...CGGCTGTCTTGCAAGGAGCTTGACATTTCCAAATTCCATTGCTCTGTTTGGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp GTTTCCTGGAGTGCTGTCCTAAGTCTTCCCCAAACAGAGCAATGGAATTTGGAACTGGGGAAAAGTAGGTaGAGTCTTCTAGAACCTGGA +
Preference number: 4 (lower is better)
Translates to: VSWSAVLSLPQTEQWNLELGKSR*SLLEPG
Trigger: TCCAGGTTCTAGAAGACTCCACCTACTTTTCCCCAG...TTCCAAATTCCATTGCTCTGTTTGGGGAAGACTTAGGACAGCACTCCAGGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000433060.3
CDS-3UTR CCA 90 bp CTCAGTTTTCCTGTCTGCACAACAGGTACTCCGATGCTCAGTGTGAGACTAGAGAGGAAGTTTGGGGAGTaGAAGTTACAAAGAGGATCT +
Preference number: 4 (lower is better)
Translates to: LSFPVCTTGTPMLSVRLERKFGE*KLQRGS
Trigger: AGATCCTCTTTGTAACTTCCACTCCCCAAACTTCCT...CTCTAGTCTCACACTGAGCATCGGAGTACCTGTTGTGCAGACAGGAAAACTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp ACTCAGGTCAATGGGGAGGAAGAATTTCCCATTCTCTCAGCACCTGGCATGAAGTCTTTTTCAAACTTGTaGAGCTTGTCGGCATTGTCG +
Preference number: 4 (lower is better)
Translates to: TQVNGEEEFPILSAPGMKSFSNL*SLSALS
Trigger: CGACAATGCCGACAAGCTCCACAAGTTTGAAAAAGA...CTTCATGCCAGGTGCTGAGAGAATGGGAAATTCTTCCTCCCCATTGACCTGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp TATAATCAGGCTCCACTGGGAAAGTTTGAAGTCCAGGTCTCTGGGAAGTGCAGAGAAATTCCACAGGGATaGCAGTTAGATGAGGACTTC +
Preference number: 4 (lower is better)
Translates to: YNQAPLGKFEVQVSGKCREIPQG*QLDEDF
Trigger: GAAGTCCTCATCTAACTGCCATCCCTGTGGAATTTC...TCTGCACTTCCCAGAGACCTGGACTTCAAACTTTCCCAGTGGAGCCTGATTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp CTCAGTTTTCCTGTCTGCACAACAGGTACTCCGATGCTCAGTGTGAGACTAGAGCAGAGCAATGGAATTTaGAAATGTCAAGCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: LSFPVCTTGTPMLSVRLEQSNGI*KCQAPC
Trigger: GCAAGGAGCTTGACATTTCCAAATTCCATTGCTCTG...CTCTAGTCTCACACTGAGCATCGGAGTACCTGTTGTGCAGACAGGAAAACTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp CTCAGTTTTCCTGTCTGCACAACAGGTACTCCGATGCTCAGTGTGAGACTAGAGCCCCAAACAGAGCAATaGAATTTGGAAATGTCAAGC +
Preference number: 4 (lower is better)
Translates to: LSFPVCTTGTPMLSVRLEPQTEQ*NLEMSS
Trigger: GCTTGACATTTCCAAATTCCATTGCTCTGTTTGGGG...CTCTAGTCTCACACTGAGCATCGGAGTACCTGTTGTGCAGACAGGAAAACTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp GCACAATCACATGTAAACACAACACCGGGCATCCAGACTTTGGGGGCTGATACATCCTATGAAATGTGGTaGGAACAGAGATTAGGAAGG +
Preference number: 4 (lower is better)
Translates to: AQSHVNTTPGIQTLGADTSYEMW*EQRLGR
Trigger: CCTTCCTAATCTCTGTTCCCACCACATTTCATAGGA...TGTATCAGCCCCCAAAGTCTGGATGCCCGGTGTTGTGTTTACATGTGATTGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp AGCATCAATATTTGCTGTGGGGGACAGGCAGTGTTCTTGGAATCCCCACACTGGATCCCCAACATAAACTaGGGTCAAAATGTCCTTAAG +
Preference number: 4 (lower is better)
Translates to: SINICCGGQAVFLESPHWIPNIN*GQNVLK
Trigger: CTTAAGGACATTTTGACCCCAGTTTATGTTGGGGAT...CCAGTGTGGGGATTCCAAGAACACTGCCTGTCCCCCACAGCAAATATTGATGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp AGCATCAATATTTGCTGTGGGGGACAGGCAGTGTTCTTGGAATCCCCACACTGGAGACATTTTCCTTTCTaGTCCATCCCCAACATAAAC +
Preference number: 4 (lower is better)
Translates to: SINICCGGQAVFLESPHWRHFPF*SIPNIN
Trigger: GTTTATGTTGGGGATGGACCAGAAAGGAAAATGTCT...CCAGTGTGGGGATTCCAAGAACACTGCCTGTCCCCCACAGCAAATATTGATGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp GTTTCCTGGAGTGCTGTCCTAAGTCTTCCCCAAACAGAGCAATGGAATTTGGAATTCGGGAGAAACAGCTaGGTCTCTCACTCTAACCTA +
Preference number: 4 (lower is better)
Translates to: VSWSAVLSLPQTEQWNLEFGRNS*VSHSNL
Trigger: TAGGTTAGAGTGAGAGACCCAGCTGTTTCTCCCGAA...TTCCAAATTCCATTGCTCTGTTTGGGGAAGACTTAGGACAGCACTCCAGGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp GAAGCCCTGAAACATGGCGATGTGTCTGTTTACAATGAAAACACTTGGCAGCTCTTCGGGAGAAACAGCTaGGTCTCTCACTCTAACCTA +
Preference number: 4 (lower is better)
Translates to: EALKHGDVSVYNENTWQLFGRNS*VSHSNL
Trigger: TAGGTTAGAGTGAGAGACCCAGCTGTTTCTCCCGAA...GAGCTGCCAAGTGTTTTCATTGTAAACAGACACATCGCCATGTTTCAGGGCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp GAAGCCCTGAAACATGGCGATGTGTCTGTTTACAATGAAAACACTTGGCAGCTCTGGGACTCAGGTCAATaGGGAGGAAGAATTTCCCAT +
Preference number: 4 (lower is better)
Translates to: EALKHGDVSVYNENTWQLWDSGQ*GGRISH
Trigger: ATGGGAAATTCTTCCTCCCCATTGACCTGAGTCCCA...GAGCTGCCAAGTGTTTTCATTGTAAACAGACACATCGCCATGTTTCAGGGCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp CTTAAGAGGAGTGCAAGATCATTCAGAGAACACAGAGAAGCATGCTCCACTTACTTGGAATCCCCACACTaGTACACAGACCCATTTGGC +
Preference number: 4 (lower is better)
Translates to: LKRSARSFREHREACSTYLESPH*YTDPFG
Trigger: GCCAAATGGGTCTGTGTACCAGTGTGGGGATTCCAA...GTAAGTGGAGCATGCTTCTCTGTGTTCTCTGAATGATCTTGCACTCCTCTTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp CTTAAGAGGAGTGCAAGATCATTCAGAGAACACAGAGAAGCATGCTCCACTTACGACAGGCAGTGTTCTTaGAATCCCCACACTGGTACA +
Preference number: 4 (lower is better)
Translates to: LKRSARSFREHREACSTYDRQCS*NPHTGT
Trigger: TGTACCAGTGTGGGGATTCCAAGAACACTGCCTGTC...GTAAGTGGAGCATGCTTCTCTGTGTTCTCTGAATGATCTTGCACTCCTCTTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp GCACAATCACATGTAAACACAACACCGGGCATCCAGACTTTGGGGGCTGATACAGGAGAGGAAAATCTTTaGCTGACCAACAGCATCAAT +
Preference number: 4 (lower is better)
Translates to: AQSHVNTTPGIQTLGADTGEENL*LTNSIN
Trigger: ATTGATGCTGTTGGTCAGCCAAAGATTTTCCTCTCC...TGTATCAGCCCCCAAAGTCTGGATGCCCGGTGTTGTGTTTACATGTGATTGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp GTTTCCTGGAGTGCTGTCCTAAGTCTTCCCCAAACAGAGCAATGGAATTTGGAAAAAATACAATGCCGTTaGAGCCCTGAAACATGGCGA +
Preference number: 4 (lower is better)
Translates to: VSWSAVLSLPQTEQWNLEKIQCR*SPETWR
Trigger: TCGCCATGTTTCAGGGCTTCAACGGCATTGTATTTT...TTCCAAATTCCATTGCTCTGTTTGGGGAAGACTTAGGACAGCACTCCAGGAAAC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp CTTAAGAGGAGTGCAAGATCATTCAGAGAACACAGAGAAGCATGCTCCACTTACCCAGACTTTGGGGGCTaGTACAAGAAAACGCTGTAT +
Preference number: 4 (lower is better)
Translates to: LKRSARSFREHREACSTYPDFGG*YKKTLY
Trigger: ATACAGCGTTTTCTTGTATCAGCCCCCAAAGTCTGG...GTAAGTGGAGCATGCTTCTCTGTGTTCTCTGAATGATCTTGCACTCCTCTTAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp GAAGCCCTGAAACATGGCGATGTGTCTGTTTACAATGAAAACACTTGGCAGCTCTTACGAGATCGCTGCTaGAGGACCTTAATCATAGCA +
Preference number: 4 (lower is better)
Translates to: EALKHGDVSVYNENTWQLLRDRC*RTLIIA
Trigger: TGCTATGATTAAGGTCCTGCAGCAGCGATCTCGTAA...GAGCTGCCAAGTGTTTTCATTGTAAACAGACACATCGCCATGTTTCAGGGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp AGCATCAATATTTGCTGTGGGGGACAGGCAGTGTTCTTGGAATCCCCACACTGGTTTCTTAACTTTGTTTaGAAACCTACACGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: SINICCGGQAVFLESPHWFLNFV*KPTRLF
Trigger: GAAGAGGCGTGTAGGTTTGCAAACAAAGTTAAGAAA...CCAGTGTGGGGATTCCAAGAACACTGCCTGTCCCCCACAGCAAATATTGATGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp CTTACATTCCGTTTTGTAATAAATACTTACAGGTGTCTCTATGTGAACAGACTCGGCTCCACCACTGCCTaGTCTCCCAACGAAAGCCTG +
Preference number: 4 (lower is better)
Translates to: LTFRFVINTYRCLYVNRLGSTTA*SPNESL
Trigger: CAGGCTTTCGTTGGGAGAGCAGGCAGTGGTGGAGCC...GAGTCTGTTCACATAGAGACACCTGTAAGTATTTATTACAAAACGGAATGTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp TCACCTCAATTTGGGGAGGCTATAACTTCACCGGGGTTACACACCCAAGACCAGGCTCTCAAGATTTCCTaGAGGCTTTTCTTAAATCAA +
Preference number: 4 (lower is better)
Translates to: SPQFGEAITSPGLHTQDQALKIS*RLFLNQ
Trigger: TTGATTTAAGAAAAGCCTCCAGGAAATCTTGAGAGC...CTGGTCTTGGGTGTGTAACCCCGGTGAAGTTATAGCCTCCCCAAATTGAGGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp GAAGCCCTGAAACATGGCGATGTGTCTGTTTACAATGAAAACACTTGGCAGCTCACTCAGAAGTTAGGATaGATGGGGACCGAGATCATA +
Preference number: 4 (lower is better)
Translates to: EALKHGDVSVYNENTWQLTQKLG*MGTEII
Trigger: TATGATCTCGGTCCCCATCCATCCTAACTTCTGAGT...GAGCTGCCAAGTGTTTTCATTGTAAACAGACACATCGCCATGTTTCAGGGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp TATAATCAGGCTCCACTGGGAAAGTTTGAAGTCCAGGTCTCTGGGAAGTGCAGATTGTCATCTGTTTCCTaGAGTGCTGTCCTAAGTCTT +
Preference number: 4 (lower is better)
Translates to: YNQAPLGKFEVQVSGKCRLSSVS*SAVLSL
Trigger: AAGACTTAGGACAGCACTCCAGGAAACAGATGACAA...TCTGCACTTCCCAGAGACCTGGACTTCAAACTTTCCCAGTGGAGCCTGATTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp GAAGCCCTGAAACATGGCGATGTGTCTGTTTACAATGAAAACACTTGGCAGCTCTCTGTCACCTCAATTTaGGGAGGCTATAACTTCACC +
Preference number: 4 (lower is better)
Translates to: EALKHGDVSVYNENTWQLSVTSI*GGYNFT
Trigger: GGTGAAGTTATAGCCTCCCCAAATTGAGGTGACAGA...GAGCTGCCAAGTGTTTTCATTGTAAACAGACACATCGCCATGTTTCAGGGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp GAAGCCCTGAAACATGGCGATGTGTCTGTTTACAATGAAAACACTTGGCAGCTCGTACACAGACCCATTTaGCTGTATGGCCATGTACAT +
Preference number: 4 (lower is better)
Translates to: EALKHGDVSVYNENTWQLVHRPI*LYGHVH
Trigger: ATGTACATGGCCATACAGCCAAATGGGTCTGTGTAC...GAGCTGCCAAGTGTTTTCATTGTAAACAGACACATCGCCATGTTTCAGGGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR CAA 72 bp AAGCATGCTCCACTTACTCCAGCGTGGACACTGGTTTaGAACCCTGGTTTTGAAAAACACATCTCTTTGCTC +
Preference number: 4 (lower is better)
Translates to: KHAPLTPAWTLV*NPGFEKHISLL
Trigger: GAGCAAAGAGATGTGTTTTTCAAAACCAGGGTTCAAAACCAGTGTCCACGCTGGAGTAAGTGGAGCATGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp TTTACAATGAAAACACTTGGCAGCTCAGGGGGACCTCGAAGAGCAAGCAAGTCTTCTCTGTTGAAATCATaGAGTCTTCTAATCTCGCCT +
Preference number: 4 (lower is better)
Translates to: FTMKTLGSSGGPRRASKSSLLKS*SLLISP
Trigger: AGGCGAGATTAGAAGACTTCATGATTTCAACAGAGA...AGACTTGCTTGCTCTTCGAGGTCCCCCTGAGCTGCCAAGTGTTTTCATTGTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp GAAGCCCTGAAACATGGCGATGTGTCTGTTTACAATGAAAACACTTGGCAGCTCAGCCCAATCATCTCTTaGAAATCCAAACCAAACAGG +
Preference number: 4 (lower is better)
Translates to: EALKHGDVSVYNENTWQLSPIIS*KSKPNR
Trigger: CCTGTTTGGTTTGGATTTTCAAGAGATGATTGGGCT...GAGCTGCCAAGTGTTTTCATTGTAAACAGACACATCGCCATGTTTCAGGGCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp CTGGAGTGCTGTCCTAAGTCTTCCCCAAACAGAGCAATGGAATTTGGAAATGTCTGTGTCTGTTTACAATaGAAACACTTGGCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: LECCPKSSPNRAMEFGNVCVCLQ*KHLAAQ
Trigger: CTGAGCTGCCAAGTGTTTTCATTGTAAACAGACACA...GACATTTCCAAATTCCATTGCTCTGTTTGGGGAAGACTTAGGACAGCACTCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp TTTACAATGAAAACACTTGGCAGCTCAGGGGGACCTCGAAGAGCAAGCAAGTCTGTTCTGCACATGCTCTaGAAGTTTTGGAAGATAATG +
Preference number: 4 (lower is better)
Translates to: FTMKTLGSSGGPRRASKSVLHML*KFWKIM
Trigger: CATTATCTTCCAAAACTTTCAGAGCATGTGCAGAAC...AGACTTGCTTGCTCTTCGAGGTCCCCCTGAGCTGCCAAGTGTTTTCATTGTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp ACTCAGGTCAATGGGGAGGAAGAATTTCCCATTCTCTCAGCACCTGGCATGAAGAGGAAAATCTTTGGCTaGCCAACAGCATCAATATTT +
Preference number: 4 (lower is better)
Translates to: TQVNGEEEFPILSAPGMKRKIFG*PTASIF
Trigger: AAATATTGATGCTGTTGGTCAGCCAAAGATTTTCCT...CTTCATGCCAGGTGCTGAGAGAATGGGAAATTCTTCCTCCCCATTGACCTGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp CTTACATTCCGTTTTGTAATAAATACTTACAGGTGTCTCTATGTGAACAGACTCTGTTGCTGCTGCTGCTaGCCCCTGAAGAACTGCGAC +
Preference number: 4 (lower is better)
Translates to: LTFRFVINTYRCLYVNRLCCCCC*PLKNCD
Trigger: GTCGCAGTTCTTCAGGGGGCAGCAGCAGCAGCAACA...GAGTCTGTTCACATAGAGACACCTGTAAGTATTTATTACAAAACGGAATGTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp TATAATCAGGCTCCACTGGGAAAGTTTGAAGTCCAGGTCTCTGGGAAGTGCAGATATAGTTTGGAGCTGTaGTTCTGGTGGAACACAATA +
Preference number: 4 (lower is better)
Translates to: YNQAPLGKFEVQVSGKCRYSLEL*FWWNTI
Trigger: TATTGTGTTCCACCAGAAGCACAGCTCCAAACTATA...TCTGCACTTCCCAGAGACCTGGACTTCAAACTTTCCCAGTGGAGCCTGATTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp AGCATCAATATTTGCTGTGGGGGACAGGCAGTGTTCTTGGAATCCCCACACTGGTTTTTCATCCAACTGTaGTATCAAGCACTTGAGATT +
Preference number: 4 (lower is better)
Translates to: SINICCGGQAVFLESPHWFFIQL*YQALEI
Trigger: AATCTCAAGTGCTTGATAGCACAGTTGGATGAAAAA...CCAGTGTGGGGATTCCAAGAACACTGCCTGTCCCCCACAGCAAATATTGATGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp CTTACATTCCGTTTTGTAATAAATACTTACAGGTGTCTCTATGTGAACAGACTCTCCTCTTGCCAGATGTaGGCCTCCAGCGAGCTCTCT +
Preference number: 4 (lower is better)
Translates to: LTFRFVINTYRCLYVNRLSSCQM*ASSELS
Trigger: AGAGAGCTCGCTGGAGGCCCACATCTGGCAAGAGGA...GAGTCTGTTCACATAGAGACACCTGTAAGTATTTATTACAAAACGGAATGTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp CTGGAGTGCTGTCCTAAGTCTTCCCCAAACAGAGCAATGGAATTTGGAAATGTCCCCCAAACAGAGCAATaGAATTTGGAAATGTCAAGC +
Preference number: 4 (lower is better)
Translates to: LECCPKSSPNRAMEFGNVPQTEQ*NLEMSS
Trigger: GCTTGACATTTCCAAATTCCATTGCTCTGTTTGGGG...GACATTTCCAAATTCCATTGCTCTGTTTGGGGAAGACTTAGGACAGCACTCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp TATAATCAGGCTCCACTGGGAAAGTTTGAAGTCCAGGTCTCTGGGAAGTGCAGACACTGTATATACAACTaGCCTGGTAGGTTACAAAAG +
Preference number: 4 (lower is better)
Translates to: YNQAPLGKFEVQVSGKCRHCIYN*PGRLQK
Trigger: CTTTTGTAACCTACCAGGCCAGTTGTATATACAGTG...TCTGCACTTCCCAGAGACCTGGACTTCAAACTTTCCCAGTGGAGCCTGATTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp CTGGAGTGCTGTCCTAAGTCTTCCCCAAACAGAGCAATGGAATTTGGAAATGTCGAGCTGTGCTTCTGGTaGAACACAATAATTTCCATC +
Preference number: 4 (lower is better)
Translates to: LECCPKSSPNRAMEFGNVELCFW*NTIISI
Trigger: GATGGAAATTATTGTGTTCCACCAGAAGCACAGCTC...GACATTTCCAAATTCCATTGCTCTGTTTGGGGAAGACTTAGGACAGCACTCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp GTTTCCTGGAGTGCTGTCCTAAGTCTTCCCCAAACAGAGCAATGGAATTTGGAATTCCATATAATATCCTaGCAGCACACAGAAACTGCC +
Preference number: 4 (lower is better)
Translates to: VSWSAVLSLPQTEQWNLEFHIIS*QHTETA
Trigger: GGCAGTTTCTGTGTGCTGCCAGGATATTATATGGAA...TTCCAAATTCCATTGCTCTGTTTGGGGAAGACTTAGGACAGCACTCCAGGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp CTTACATTCCGTTTTGTAATAAATACTTACAGGTGTCTCTATGTGAACAGACTCCAGATACCAGTCTGCTaGGAAGAGCCGGCACGAGCA +
Preference number: 4 (lower is better)
Translates to: LTFRFVINTYRCLYVNRLQIPVC*EEPARA
Trigger: TGCTCGTGCCGGCTCTTCCCAGCAGACTGGTATCTG...GAGTCTGTTCACATAGAGACACCTGTAAGTATTTATTACAAAACGGAATGTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp GAAGCCCTGAAACATGGCGATGTGTCTGTTTACAATGAAAACACTTGGCAGCTCGGAGAGGAAAATCTTTaGCTGACCAACAGCATCAAT +
Preference number: 4 (lower is better)
Translates to: EALKHGDVSVYNENTWQLGEENL*LTNSIN
Trigger: ATTGATGCTGTTGGTCAGCCAAAGATTTTCCTCTCC...GAGCTGCCAAGTGTTTTCATTGTAAACAGACACATCGCCATGTTTCAGGGCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR CAA 72 bp CCCTCAAGTTCTATAATCAGGCTCCACTGGGAAAGTTaGAAGTCCAGGTCTCTGGGAAGTGCAGAAATATTT +
Preference number: 4 (lower is better)
Translates to: PSSSIIRLHWES*KSRSLGSAEIF
Trigger: AAATATTTCTGCACTTCCCAGAGACCTGGACTTCAAACTTTCCCAGTGGAGCCTGATTATAGAACTTGAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR CAA 72 bp CAATCACATGTAAACACAACACCGGGCATCCAGACTTaGGGGGCTGATACAAGAAAACGCTGTATATGTAGT +
Preference number: 4 (lower is better)
Translates to: QSHVNTTPGIQT*GADTRKRCICS
Trigger: ACTACATATACAGCGTTTTCTTGTATCAGCCCCCAAAGTCTGGATGCCCGGTGTTGTGTTTACATGTGATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp CTGGAGTGCTGTCCTAAGTCTTCCCCAAACAGAGCAATGGAATTTGGAAATGTCAAACCCGGAAAAACCTaGCAACACTGTATATACAAC +
Preference number: 4 (lower is better)
Translates to: LECCPKSSPNRAMEFGNVKPGKT*QHCIYN
Trigger: GTTGTATATACAGTGTTGTCAGGTTTTTCCGGGTTT...GACATTTCCAAATTCCATTGCTCTGTTTGGGGAAGACTTAGGACAGCACTCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp CTTAAGAGGAGTGCAAGATCATTCAGAGAACACAGAGAAGCATGCTCCACTTACTACAGACTGGCAATATaGAGACGTCAAACGTTACAG +
Preference number: 4 (lower is better)
Translates to: LKRSARSFREHREACSTYYRLAI*RRQTLQ
Trigger: CTGTAACGTTTGACGTCTTCATATTGCCAGTCTGTA...GTAAGTGGAGCATGCTTCTCTGTGTTCTCTGAATGATCTTGCACTCCTCTTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp CTTAAGAGGAGTGCAAGATCATTCAGAGAACACAGAGAAGCATGCTCCACTTACTCTTTACGAGATCGCTaGTGCAGGACCTTAATCATA +
Preference number: 4 (lower is better)
Translates to: LKRSARSFREHREACSTYSLRDR*CRTLII
Trigger: TATGATTAAGGTCCTGCAGCAGCGATCTCGTAAAGA...GTAAGTGGAGCATGCTTCTCTGTGTTCTCTGAATGATCTTGCACTCCTCTTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp GTTTCCTGGAGTGCTGTCCTAAGTCTTCCCCAAACAGAGCAATGGAATTTGGAATCTTTCTTCTTTCTCTaGCGCTTTCCTTGTTTGTCA +
Preference number: 4 (lower is better)
Translates to: VSWSAVLSLPQTEQWNLESFFFL*RFPCLS
Trigger: TGACAAACAAGGAAAGCGGCAGAGAAAGAAGAAAGA...TTCCAAATTCCATTGCTCTGTTTGGGGAAGACTTAGGACAGCACTCCAGGAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp GTTTCCTGGAGTGCTGTCCTAAGTCTTCCCCAAACAGAGCAATGGAATTTGGAAAAAGGGTTCTGCACATaGTCTGAAAGTTTTGGAAGA +
Preference number: 4 (lower is better)
Translates to: VSWSAVLSLPQTEQWNLEKGFCT*SESFGR
Trigger: TCTTCCAAAACTTTCAGAGCATGTGCAGAACCCTTT...TTCCAAATTCCATTGCTCTGTTTGGGGAAGACTTAGGACAGCACTCCAGGAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp CTTACATTCCGTTTTGTAATAAATACTTACAGGTGTCTCTATGTGAACAGACTCCACATGAGGCGATCATaGCTAGTTCAGTCCCTCGGC +
Preference number: 4 (lower is better)
Translates to: LTFRFVINTYRCLYVNRLHMRRS*LVQSLG
Trigger: GCCGAGGGACTGAACTAGCCATGATCGCCTCATGTG...GAGTCTGTTCACATAGAGACACCTGTAAGTATTTATTACAAAACGGAATGTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp CTTACATTCCGTTTTGTAATAAATACTTACAGGTGTCTCTATGTGAACAGACTCGGGTGGCACAGAGGCTaGCCAAAGCCACTGATTTCT +
Preference number: 4 (lower is better)
Translates to: LTFRFVINTYRCLYVNRLGWHRG*PKPLIS
Trigger: AGAAATCAGTGGCTTTGGCCAGCCTCTGTGCCACCC...GAGTCTGTTCACATAGAGACACCTGTAAGTATTTATTACAAAACGGAATGTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp CTGGAGTGCTGTCCTAAGTCTTCCCCAAACAGAGCAATGGAATTTGGAAATGTCATCCCCAACATAAACTaGGGTCAAAATGTCCTTAAG +
Preference number: 4 (lower is better)
Translates to: LECCPKSSPNRAMEFGNVIPNIN*GQNVLK
Trigger: CTTAAGGACATTTTGACCCCAGTTTATGTTGGGGAT...GACATTTCCAAATTCCATTGCTCTGTTTGGGGAAGACTTAGGACAGCACTCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp GTTTCCTGGAGTGCTGTCCTAAGTCTTCCCCAAACAGAGCAATGGAATTTGGAATTTGAACCCTGGTTTTaGAAAACACATCTCTTTGCT +
Preference number: 4 (lower is better)
Translates to: VSWSAVLSLPQTEQWNLEFEPWF*KTHLFA
Trigger: AGCAAAGAGATGTGTTTTTCAAAACCAGGGTTCAAA...TTCCAAATTCCATTGCTCTGTTTGGGGAAGACTTAGGACAGCACTCCAGGAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp CTGGAGTGCTGTCCTAAGTCTTCCCCAAACAGAGCAATGGAATTTGGAAATGTCTTTGAACCCTGGTTTTaGAAAACACATCTCTTTGCT +
Preference number: 4 (lower is better)
Translates to: LECCPKSSPNRAMEFGNVFEPWF*KTHLFA
Trigger: AGCAAAGAGATGTGTTTTTCAAAACCAGGGTTCAAA...GACATTTCCAAATTCCATTGCTCTGTTTGGGGAAGACTTAGGACAGCACTCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp TATAATCAGGCTCCACTGGGAAAGTTTGAAGTCCAGGTCTCTGGGAAGTGCAGATTTTTCATCCAACTGTaGTATCAAGCACTTGAGATT +
Preference number: 4 (lower is better)
Translates to: YNQAPLGKFEVQVSGKCRFFIQL*YQALEI
Trigger: AATCTCAAGTGCTTGATAGCACAGTTGGATGAAAAA...TCTGCACTTCCCAGAGACCTGGACTTCAAACTTTCCCAGTGGAGCCTGATTATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp CTTACATTCCGTTTTGTAATAAATACTTACAGGTGTCTCTATGTGAACAGACTCAAGTTCCAGGAGGGCTaGGGCATTGTATTCCGGCAT +
Preference number: 4 (lower is better)
Translates to: LTFRFVINTYRCLYVNRLKFQEG*GIVFRH
Trigger: ATGCCGGAATACAATGCCCCAGCCCTCCTGGAACTT...GAGTCTGTTCACATAGAGACACCTGTAAGTATTTATTACAAAACGGAATGTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp CTTAAGAGGAGTGCAAGATCATTCAGAGAACACAGAGAAGCATGCTCCACTTACAGACATTTTCCTTTCTaGTCCATCCCCAACATAAAC +
Preference number: 4 (lower is better)
Translates to: LKRSARSFREHREACSTYRHFPF*SIPNIN
Trigger: GTTTATGTTGGGGATGGACCAGAAAGGAAAATGTCT...GTAAGTGGAGCATGCTTCTCTGTGTTCTCTGAATGATCTTGCACTCCTCTTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp CTTACATTCCGTTTTGTAATAAATACTTACAGGTGTCTCTATGTGAACAGACTCCACCTAACACACTCCTaGCTCTTTTCCGTGGCACTT +
Preference number: 4 (lower is better)
Translates to: LTFRFVINTYRCLYVNRLHLTHS*LFSVAL
Trigger: AAGTGCCACGGAAAAGAGGCAGGAGTGTGTTAGGTG...GAGTCTGTTCACATAGAGACACCTGTAAGTATTTATTACAAAACGGAATGTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp CTTACATTCCGTTTTGTAATAAATACTTACAGGTGTCTCTATGTGAACAGACTCGCGATCCAGCTGACCTaGAGGTACAAAAACATCAGG +
Preference number: 4 (lower is better)
Translates to: LTFRFVINTYRCLYVNRLAIQLT*RYKNIR
Trigger: CCTGATGTTTTTGTACCTCCAGGTCAGCTGGATCGC...GAGTCTGTTCACATAGAGACACCTGTAAGTATTTATTACAAAACGGAATGTAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR TCA 90 bp CTTACATTCCGTTTTGTAATAAATACTTACAGGTGTCTCTATGTGAACAGACTCAGGGGCTGGCAGAGTTaGTTTACCTTCCTATCTCTA +
Preference number: 4 (lower is better)
Translates to: LTFRFVINTYRCLYVNRLRGWQS*FTFLSL
Trigger: TAGAGATAGGAAGGTAAATCAACTCTGCCAGCCCCT...GAGTCTGTTCACATAGAGACACCTGTAAGTATTTATTACAAAACGGAATGTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
3UTR CAA 72 bp TTAGGATCCAAGCAAAGTTTCCTGAGTAGCACTCTCTaGAGTGTTTCATTTAGAAGGTACTTGGAAGAGGTA +
Preference number: 4 (lower is better)
Translates to: LGSKQSFLSSTL*SVSFRRYLEEV
Trigger: TACCTCTTCCAAGTACCTTCTAAATGAAACACTCAAGAGAGTGCTACTCAGGAAACTTTGCTTGGATCCTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp CTTACATTCCGTTTTGTAATAAATACTTACAGGTGTCTCTATGTGAACAGACTCATAATCAGGCTCCACTaGGAAAGTTTGAAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: LTFRFVINTYRCLYVNRLIIRLH*ESLKSR
Trigger: CCTGGACTTCAAACTTTCCCAGTGGAGCCTGATTAT...GAGTCTGTTCACATAGAGACACCTGTAAGTATTTATTACAAAACGGAATGTAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp CTTACATTCCGTTTTGTAATAAATACTTACAGGTGTCTCTATGTGAACAGACTCGTACACAGACCCATTTaGCTGTATGGCCATGTACAT +
Preference number: 4 (lower is better)
Translates to: LTFRFVINTYRCLYVNRLVHRPI*LYGHVH
Trigger: ATGTACATGGCCATACAGCCAAATGGGTCTGTGTAC...GAGTCTGTTCACATAGAGACACCTGTAAGTATTTATTACAAAACGGAATGTAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR GCA 90 bp CTTACATTCCGTTTTGTAATAAATACTTACAGGTGTCTCTATGTGAACAGACTCTTCTCAACATATGCTTaGTTCTCTCGTAACTCCTCT +
Preference number: 4 (lower is better)
Translates to: LTFRFVINTYRCLYVNRLFSTYA*FSRNSS
Trigger: AGAGGAGTTACGAGAGAAGCAAGCATATGTTGAGAA...GAGTCTGTTCACATAGAGACACCTGTAAGTATTTATTACAAAACGGAATGTAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CCA 90 bp CTTACATTCCGTTTTGTAATAAATACTTACAGGTGTCTCTATGTGAACAGACTCTTTTTAGGTATAGTTTaGAGCTGTGCTTCTGGTGGA +
Preference number: 4 (lower is better)
Translates to: LTFRFVINTYRCLYVNRLFLGIV*SCASGG
Trigger: TCCACCAGAAGCACAGCTCCAAACTATACCTAAAAA...GAGTCTGTTCACATAGAGACACCTGTAAGTATTTATTACAAAACGGAATGTAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS CCA 90 bp GGAGGCGGCAGGCGGGGGCTGTGGAGCACCCAGGGCCATCGGGAGTaGAAGCGGCAGGGAGACAGAGTGCAGTGGCCCGCTGGCGGAAGA +
Preference number: 5 (lower is better)
Translates to: GGGRRGLWSTQGHRE*KRQGDRVQWPAGGR
Trigger: TCTTCCGCCAGCGGGCCACTGCACTCTGTCTCCCTGCCGCTTCCACTCCCGATGGCCCTGGGTGCTCCACAGCCCCCGCCTGCCGCCTCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317829.12
ENST00000433060.3
ENST00000539727.1
CDS TCA 90 bp TTCTCTGCGGTCCCTTTGGCCGCTGGGTGTTTCAGGACGGGGCTGTaGGCAGGGGTCGTGCTCAGCCGGCCGCGGCTGGGAAGGGAGGCC +
Preference number: 5 (lower is better)
Translates to: FSAVPLAAGCFRTGL*AGVVLSRPRLGREA
Trigger: GGCCTCCCTTCCCAGCCGCGGCCGGCTGAGCACGACCCCTGCTCACAGCCCCGTCCTGAAACACCCAGCGGCCAAAGGGACCGCAGAGAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS GCA 90 bp CTTTGGCCGCTGGGTGTTTCAGGACGGGGCTGTGAGCAGGGGTCGTaGTCAGCCGGCCGCGGCTGGGAAGGGAGGCCATGCTGGGCCAGA +
Preference number: 5 (lower is better)
Translates to: LWPLGVSGRGCEQGS*SAGRGWEGRPCWAR
Trigger: TCTGGCCCAGCATGGCCTCCCTTCCCAGCCGCGGCCGGCTGAGCACGACCCCTGCTCACAGCCCCGTCCTGAAACACCCAGCGGCCAAAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS CCA 90 bp TTTGCCCTCCACATGAGGCGATCATGGCTAGTTCAGTCCCTCGGCTaGGGAAGACGGCTGCCGGGCAGCGCGGGGAAGTGGCGCCGGACA +
Preference number: 5 (lower is better)
Translates to: FALHMRRSWLVQSLG*GRRLPGSAGKWRRT
Trigger: TGTCCGGCGCCACTTCCCCGCGCTGCCCGGCAGCCGTCTTCCCCAGCCGAGGGACTGAACTAGCCATGATCGCCTCATGTGGAGGGCAAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS CCA 90 bp CAGGGGTCGTGCTCAGCCGGCCGCGGCTGGGAAGGGAGGCCATGCTaGGCCAGAAGAGCTCGGCACTCTTGTCAGTCTGTGTGCTGCTGT +
Preference number: 5 (lower is better)
Translates to: QGSCSAGRGWEGRPC*ARRARHSCQSVCCC
Trigger: ACAGCAGCACACAGACTGACAAGAGTGCCGAGCTCTTCTGGCCCAGCATGGCCTCCCTTCCCAGCCGCGGCCGGCTGAGCACGACCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS CCA 90 bp GCGCCTCGTCCTTATGCGCCTGTCCACTGTTGGCACGGTTCACAGTaGGCCTCCCCTCAGTTCGGGACTTCTGACTGGTGCCCCCTGCCA +
Preference number: 5 (lower is better)
Translates to: APRPYAPVHCWHGSQ*ASPQFGTSDWCPLP
Trigger: TGGCAGGGGGCACCAGTCAGAAGTCCCGAACTGAGGGGAGGCCCACTGTGAACCGTGCCAACAGTGGACAGGCGCATAAGGACGAGGCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CAA 90 bp CCAAGCAGAGCCCCAGAGGGCCAGTTCCCACTCCTCTGTCGTACTGGGTGGCACCCGGGAAGGTGTTGCTaGGCCCCATTCCTCTCCAGG +
Preference number: 5 (lower is better)
Translates to: PSRAPEGQFPLLCRTGWHPGRCC*APFLSR
Trigger: CCTGGAGAGGAATGGGGCCAAGCAACACCTTCCCGG...GTGCCACCCAGTACGACAGAGGAGTGGGAACTGGCCCTCTGGGGCTCTGCTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS GCA 90 bp GAGCGGACGTGGCCCTGCTTCAGTTCCTTCAGCGCCTCGTCCTTATaGGCCTGTCCACTGTTGGCACGGTTCACAGTGGGCCTCCCCTCA +
Preference number: 5 (lower is better)
Translates to: ERTWPCFSSFSASSL*ACPLLARFTVGLPS
Trigger: TGAGGGGAGGCCCACTGTGAACCGTGCCAACAGTGGACAGGCGCATAAGGACGAGGCGCTGAAGGAACTGAAGCAGGGCCACGTCCGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS CCA 90 bp TCACAAGTTCCCCGGCGCAACTTTGCCCTCCACATGAGGCGATCATaGCTAGTTCAGTCCCTCGGCTGGGGAAGACGGCTGCCGGGCAGC +
Preference number: 5 (lower is better)
Translates to: SQVPRRNFALHMRRS*LVQSLGWGRRLPGS
Trigger: GCTGCCCGGCAGCCGTCTTCCCCAGCCGAGGGACTGAACTAGCCATGATCGCCTCATGTGGAGGGCAAAGTTGCGCCGGGGAACTTGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS CCA 90 bp ATGGCCAGGAGAGTTCTCCAGTTTCTCTGCGGTCCCTTTGGCCGCTaGGTGTTTCAGGACGGGGCTGTGAGCAGGGGTCGTGCTCAGCCG +
Preference number: 5 (lower is better)
Translates to: MARRVLQFLCGPFGR*VFQDGAVSRGRAQP
Trigger: CGGCTGAGCACGACCCCTGCTCACAGCCCCGTCCTGAAACACCCAGCGGCCAAAGGGACCGCAGAGAAACTGGAGAACTCTCCTGGCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CAA 90 bp AGAGCCGGCACGAGCACGGCACACTGCCACCAAGCACAGCGACACACACACACAGGTGCCATACCGCAGTaGTTCCTGGATCAGCCGCTG +
Preference number: 5 (lower is better)
Translates to: RAGTSTAHCHQAQRHTHTGAIPQ*FLDQPL
Trigger: CAGCGGCTGATCCAGGAACAACTGCGGTATGGCACC...TGTGTGTGTGTGTCGCTGTGCTTGGTGGCAGTGTGCCGTGCTCGTGCCGGCTCT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS TCA 90 bp CCATCATCTCTCCATCAGGGAACTCGGGCTTGTGCAGCAAGCTGCTaGCCCGGCCTCTGTGGTCAGGCGACTTCCCATGGCCAGGAGAGT +
Preference number: 5 (lower is better)
Translates to: PSSLHQGTRACAASC*PGLCGQATSHGQES
Trigger: ACTCTCCTGGCCATGGGAAGTCGCCTGACCACAGAGGCCGGGTCAGCAGCTTGCTGCACAAGCCCGAGTTCCCTGATGGAGAGATGATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS GCA 90 bp AGGGACAGCTGCATGATTCTCTCGCTGAGCGAGCGGACGTGGCCCTaGTTCAGTTCCTTCAGCGCCTCGTCCTTATGCGCCTGTCCACTG +
Preference number: 5 (lower is better)
Translates to: RDSCMILSLSERTWP*FSSFSASSLCACPL
Trigger: CAGTGGACAGGCGCATAAGGACGAGGCGCTGAAGGAACTGAAGCAGGGCCACGTCCGCTCGCTCAGCGAGAGAATCATGCAGCTGTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS GCA 90 bp AGGGGACCCTTTCACCGCAGGCTCACAAGTTCCCCGGCGCAACTTTaGCCTCCACATGAGGCGATCATGGCTAGTTCAGTCCCTCGGCTG +
Preference number: 5 (lower is better)
Translates to: RGPFHRRLTSSPAQL*PPHEAIMASSVPRL
Trigger: CAGCCGAGGGACTGAACTAGCCATGATCGCCTCATGTGGAGGGCAAAGTTGCGCCGGGGAACTTGTGAGCCTGCGGTGAAAGGGTCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433060.3
CDS CCA 90 bp AGACAGAGTGCAGTGGCCCGCTGGCGGAAGAGGTCTGGGAGGACATaGGGCTGTGCTGCTGCATGGTTGATGGGAACGGAAGTTGGCATG +
Preference number: 5 (lower is better)
Translates to: RQSAVARWRKRSGRT*GCAAAWLMGTEVGM
Trigger: CATGCCAACTTCCGTTCCCATCAACCATGCAGCAGCACAGCCCCATGTCCTCCCAGACCTCTTCCGCCAGCGGGCCACTGCACTCTGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317829.12
ENST00000433060.3
ENST00000539727.1
CDS-3UTR CAA 90 bp TTCCCCTCGCCCTCGATGCTTCTTCTCACTGCCACACTCACACTCACGGGACACCGAGCCGGGAAGGTGTaGCTTGGCCCCATTCCTCTC +
Preference number: 5 (lower is better)
Translates to: FPSPSMLLLTATLTLTGHRAGKV*LGPIPL
Trigger: GAGAGGAATGGGGCCAAGCAACACCTTCCCGGCTCG...GTGTCCCGTGAGTGTGAGTGTGGCAGTGAGAAGAAGCATCGAGGGCGAGGGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CAA 90 bp AGAGCCGGCACGAGCACGGCACACTGCCACCAAGCACAGCGACACACACACACACCGTGCTCCTGGGTCTaGCTGACTGGGGACATCATT +
Preference number: 5 (lower is better)
Translates to: RAGTSTAHCHQAQRHTHTPCSWV*LTGDII
Trigger: AATGATGTCCCCAGTCAGCAAGACCCAGGAGCACGG...TGTGTGTGTGTGTCGCTGTGCTTGGTGGCAGTGTGCCGTGCTCGTGCCGGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CAA 90 bp ACTGCCAAGATGCAGTGCCGCATGTTAGAGGCTGTACAGCCAGGGTCTATGCCCACCCTGGCCTGGGCGTaGCTCAAAGCCTGGTCCAGG +
Preference number: 5 (lower is better)
Translates to: TAKMQCRMLEAVQPGSMPTLAWA*LKAWSR
Trigger: CCTGGACCAGGCTTTGAGCAACGCCCAGGCCAGGGT...GGGCATAGACCCTGGCTGTACAGCCTCTAACATGCGGCACTGCATCTTGGCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS CCA 90 bp GCTTCAGTTCCTTCAGCGCCTCGTCCTTATGCGCCTGTCCACTGTTaGCACGGTTCACAGTGGGCCTCCCCTCAGTTCGGGACTTCTGAC +
Preference number: 5 (lower is better)
Translates to: ASVPSAPRPYAPVHC*HGSQWASPQFGTSD
Trigger: GTCAGAAGTCCCGAACTGAGGGGAGGCCCACTGTGAACCGTGCCAACAGTGGACAGGCGCATAAGGACGAGGCGCTGAAGGAACTGAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS CCA 90 bp TCAGGGAACTCGGGCTTGTGCAGCAAGCTGCTGACCCGGCCTCTGTaGTCAGGCGACTTCCCATGGCCAGGAGAGTTCTCCAGTTTCTCT +
Preference number: 5 (lower is better)
Translates to: SGNSGLCSKLLTRPL*SGDFPWPGEFSSFS
Trigger: AGAGAAACTGGAGAACTCTCCTGGCCATGGGAAGTCGCCTGACCACAGAGGCCGGGTCAGCAGCTTGCTGCACAAGCCCGAGTTCCCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CAA 90 bp ACTGCCAAGATGCAGTGCCGCATGTTAGAGGCTGTACAGCCAGGGTCTATGCCCCGAGCCGGGAAGGTGTaGCTTGGCCCCATTCCTCTC +
Preference number: 5 (lower is better)
Translates to: TAKMQCRMLEAVQPGSMPRAGKV*LGPIPL
Trigger: GAGAGGAATGGGGCCAAGCAACACCTTCCCGGCTCG...GGGCATAGACCCTGGCTGTACAGCCTCTAACATGCGGCACTGCATCTTGGCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CAA 90 bp CAAACGTTACAGCCAGATACCAGTCTGCTGGGAAGAGCCGGCACGAGCACGGCACCGTGCTCCTGGGTCTaGCTGACTGGGGACATCATT +
Preference number: 5 (lower is better)
Translates to: QTLQPDTSLLGRAGTSTAPCSWV*LTGDII
Trigger: AATGATGTCCCCAGTCAGCAAGACCCAGGAGCACGG...TGCCGTGCTCGTGCCGGCTCTTCCCAGCAGACTGGTATCTGGCTGTAACGTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS TCA 90 bp TTGTTTGTAGGATGGGCTGGTCCTGCACTCCCTGTGGCCTGGTGCTaGATGGCCAGCAAGTTCATGTTCTCGGTTGGGGTGCCATACCGC +
Preference number: 5 (lower is better)
Translates to: LFVGWAGPALPVAWC*MASKFMFSVGVPYR
Trigger: GCGGTATGGCACCCCAACCGAGAACATGAACTTGCTGGCCATTCAGCACCAGGCCACAGGGAGTGCAGGACCAGCCCATCCTACAAACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS GCA 90 bp CCTCCTACTTTGAAGCCCTTTCCATTCCCCGAGCCGGGAAGGTGTTaGTTGGCCCCATTCCTCTCCAGGGACAGCTGCATGATTCTCTCG +
Preference number: 5 (lower is better)
Translates to: PPTLKPFPFPEPGRC*LAPFLSRDSCMILS
Trigger: CGAGAGAATCATGCAGCTGTCCCTGGAGAGGAATGGGGCCAAGCAACACCTTCCCGGCTCGGGGAATGGAAAGGGCTTCAAAGTAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CAA 90 bp AGAGCCGGCACGAGCACGGCACACTGCCACCAAGCACAGCGACACACACACACAGACTGGGGACATCATTaGCTTGGTCTTGAAGGGGTA +
Preference number: 5 (lower is better)
Translates to: RAGTSTAHCHQAQRHTHTDWGHH*LGLEGV
Trigger: TACCCCTTCAAGACCAAGCAAATGATGTCCCCAGTC...TGTGTGTGTGTGTCGCTGTGCTTGGTGGCAGTGTGCCGTGCTCGTGCCGGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CAA 90 bp TCACCTCAATTTGGGGAGGCTATAACTTCACCGGGGTTACACACCCAAGACCAGCACACACAGAGCAGGTaGGAGGGCAGCGGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: SPQFGEAITSPGLHTQDQHTQSR*EGSGSR
Trigger: CCTGCTGCCGCTGCCCTCCAACCTGCTCTGTGTGTG...CTGGTCTTGGGTGTGTAACCCCGGTGAAGTTATAGCCTCCCCAAATTGAGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CAA 90 bp GCCCTCGATGCTTCTTCTCACTGCCACACTCACACTCACGGGACACCCCATGGTGGACAGGCAGTGTTCTaGGAATCCCCACACTGGTAC +
Preference number: 5 (lower is better)
Translates to: ALDASSHCHTHTHGTPHGGQAVF*ESPHWY
Trigger: GTACCAGTGTGGGGATTCCAAGAACACTGCCTGTCC...ACCATGGGGTGTCCCGTGAGTGTGAGTGTGGCAGTGAGAAGAAGCATCGAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS GCA 90 bp TTCTCGGTTGGGGTGCCATACCGCAGTTGTTCCTGGATCAGCCGCTaGAATACTGTTCCAGCTGCCGCATCCTCGGAACCTCTCATTTCC +
Preference number: 5 (lower is better)
Translates to: FSVGVPYRSCSWISR*NTVPAAASSEPLIS
Trigger: GGAAATGAGAGGTTCCGAGGATGCGGCAGCTGGAACAGTATTGCAGCGGCTGATCCAGGAACAACTGCGGTATGGCACCCCAACCGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299004.13
ENST00000317829.12
ENST00000433060.3
CDS GCA 90 bp ATCTTCAACTTTCACCGCAGGCTCACAAGTTCCCCGGCGCAACTTTaGCCTCCACATGAGGCGATCATGGCTAGTTCAGTCCCTCGGCTG +
Preference number: 5 (lower is better)
Translates to: IFNFHRRLTSSPAQL*PPHEAIMASSVPRL
Trigger: CAGCCGAGGGACTGAACTAGCCATGATCGCCTCATGTGGAGGGCAAAGTTGCGCCGGGGAACTTGTGAGCCTGCGGTGAAAGTTGAAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317829.12
CDS CCA 90 bp CCTCCTCGTAAGTGGGCAGTTCCTCGTTGTTCTGCTGAGGCTGCGTaGACCGGACCTGTTTCTCCATCACCGTATTGTCCACCTGGTGTT +
Preference number: 5 (lower is better)
Translates to: PPRKWAVPRCSAEAA*TGPVSPSPYCPPGV
Trigger: AACACCAGGTGGACAATACGGTGATGGAGAAACAGGTCCGGTCCACGCAGCCTCAGCAGAACAACGAGGAACTGCCCACTTACGAGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS CCA 90 bp CCCGCACAAGTTCCAGGAGGGCTGGGGCATTGTATTCCGGCATGTTaGCTGGCTGGCCATTTCCATGTTTCTGCTGGGTTCTCAGTGCAT +
Preference number: 5 (lower is better)
Translates to: PAQVPGGLGHCIPAC*LAGHFHVSAGFSVH
Trigger: ATGCACTGAGAACCCAGCAGAAACATGGAAATGGCCAGCCAGCCAACATGCCGGAATACAATGCCCCAGCCCTCCTGGAACTTGTGCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CAA 90 bp AGAGCCGGCACGAGCACGGCACACTGCCACCAAGCACAGCGACACACACACACATCCGTGGAAGAAAAGTaGTTTGTAGGATGGGCTGGT +
Preference number: 5 (lower is better)
Translates to: RAGTSTAHCHQAQRHTHTSVEEK*FVGWAG
Trigger: ACCAGCCCATCCTACAAACAACTTTTCTTCCACGGA...TGTGTGTGTGTGTCGCTGTGCTTGGTGGCAGTGTGCCGTGCTCGTGCCGGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CAA 90 bp ACTGCCAAGATGCAGTGCCGCATGTTAGAGGCTGTACAGCCAGGGTCTATGCCCTGTGCTGCTGCATGGTaGATGGGAACGGAAGTTGGC +
Preference number: 5 (lower is better)
Translates to: TAKMQCRMLEAVQPGSMPCAAAW*MGTEVG
Trigger: GCCAACTTCCGTTCCCATCAACCATGCAGCAGCACA...GGGCATAGACCCTGGCTGTACAGCCTCTAACATGCGGCACTGCATCTTGGCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS GCA 90 bp TGGCCTGGTGCTGAATGGCCAGCAAGTTCATGTTCTCGGTTGGGGTaGCATACCGCAGTTGTTCCTGGATCAGCCGCTGCAATACTGTTC +
Preference number: 5 (lower is better)
Translates to: WPGAEWPASSCSRLG*HTAVVPGSAAAILF
Trigger: GAACAGTATTGCAGCGGCTGATCCAGGAACAACTGCGGTATGGCACCCCAACCGAGAACATGAACTTGCTGGCCATTCAGCACCAGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS CCA 90 bp AGCAAGTTCATGTTCTCGGTTGGGGTGCCATACCGCAGTTGTTCCTaGATCAGCCGCTGCAATACTGTTCCAGCTGCCGCATCCTCGGAA +
Preference number: 5 (lower is better)
Translates to: SKFMFSVGVPYRSCS*ISRCNTVPAAASSE
Trigger: TTCCGAGGATGCGGCAGCTGGAACAGTATTGCAGCGGCTGATCCAGGAACAACTGCGGTATGGCACCCCAACCGAGAACATGAACTTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS CCA 90 bp CACAAGTTCCAGGAGGGCTGGGGCATTGTATTCCGGCATGTTGGCTaGCTGGCCATTTCCATGTTTCTGCTGGGTTCTCAGTGCATCCAG +
Preference number: 5 (lower is better)
Translates to: HKFQEGWGIVFRHVG*LAISMFLLGSQCIQ
Trigger: CTGGATGCACTGAGAACCCAGCAGAAACATGGAAATGGCCAGCCAGCCAACATGCCGGAATACAATGCCCCAGCCCTCCTGGAACTTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS CCA 90 bp TCTTCCTTCTTTTCCTCAGCCAGCTGGCTGCTGGTAAGAGAGGTCTaGCGAGAGTGTGTCCCAGTAGCTGCTGCTATGGATGGAACGGAG +
Preference number: 5 (lower is better)
Translates to: SSFFSSASWLLVREV*RECVPVAAAMDGTE
Trigger: CTCCGTTCCATCCATAGCAGCAGCTACTGGGACACACTCTCGCCAGACCTCTCTTACCAGCAGCCAGCTGGCTGAGGAAAAGAAGGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317829.12
ENST00000433060.3
ENST00000537191.1
CDS-3UTR CAA 90 bp TCACCTCAATTTGGGGAGGCTATAACTTCACCGGGGTTACACACCCAAGACCAGGTCCACCTGGTGTTCTaGACCCTGCGGTTCTTGGCG +
Preference number: 5 (lower is better)
Translates to: SPQFGEAITSPGLHTQDQVHLVF*TLRFLA
Trigger: CGCCAAGAACCGCAGGGTCAAGAACACCAGGTGGAC...CTGGTCTTGGGTGTGTAACCCCGGTGAAGTTATAGCCTCCCCAAATTGAGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CAA 90 bp GCACAATCACATGTAAACACAACACCGGGCATCCAGACTTTGGGGGCTGATACACCGGGAAGGTGTTGCTaGGCCCCATTCCTCTCCAGG +
Preference number: 5 (lower is better)
Translates to: AQSHVNTTPGIQTLGADTPGRCC*APFLSR
Trigger: CCTGGAGAGGAATGGGGCCAAGCAACACCTTCCCGG...TGTATCAGCCCCCAAAGTCTGGATGCCCGGTGTTGTGTTTACATGTGATTGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CAA 90 bp AGACCCATTTGGCTGTATGGCCATGTACATCACCCCTCAATACAGACTGGCAATACCCTGGCCTGGGCGTaGCTCAAAGCCTGGTCCAGG +
Preference number: 5 (lower is better)
Translates to: RPIWLYGHVHHPSIQTGNTLAWA*LKAWSR
Trigger: CCTGGACCAGGCTTTGAGCAACGCCCAGGCCAGGGT...ATTGCCAGTCTGTATTGAGGGGTGATGTACATGGCCATACAGCCAAATGGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CAA 90 bp TCTGGGACTCAGGTCAATGGGGAGGAAGAATTTCCCATTCTCTCAGCACCTGGCAGGAGGGCTGGGGCATaGTATTCCGGCATGTTGGCT +
Preference number: 5 (lower is better)
Translates to: SGTQVNGEEEFPILSAPGRRAGA*YSGMLA
Trigger: AGCCAACATGCCGGAATACAATGCCCCAGCCCTCCT...GCCAGGTGCTGAGAGAATGGGAAATTCTTCCTCCCCATTGACCTGAGTCCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CAA 90 bp TTCCCCTCGCCCTCGATGCTTCTTCTCACTGCCACACTCACACTCACGGGACACCTTGAAGTGGACACTTaGAGAGGCTCTGAGGCCAAA +
Preference number: 5 (lower is better)
Translates to: FPSPSMLLLTATLTLTGHLEVDT*RGSEAK
Trigger: TTTGGCCTCAGAGCCTCTCAAAGTGTCCACTTCAAG...GTGTCCCGTGAGTGTGAGTGTGGCAGTGAGAAGAAGCATCGAGGGCGAGGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CAA 90 bp AGACCCATTTGGCTGTATGGCCATGTACATCACCCCTCAATACAGACTGGCAATCACACACAGAGCAGGTaGGAGGGCAGCGGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: RPIWLYGHVHHPSIQTGNHTQSR*EGSGSR
Trigger: CCTGCTGCCGCTGCCCTCCAACCTGCTCTGTGTGTG...ATTGCCAGTCTGTATTGAGGGGTGATGTACATGGCCATACAGCCAAATGGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CAA 90 bp AGACCCATTTGGCTGTATGGCCATGTACATCACCCCTCAATACAGACTGGCAATTGCGCCTGTCCACTGTaGGCACGGTTCACAGTGGGC +
Preference number: 5 (lower is better)
Translates to: RPIWLYGHVHHPSIQTGNCACPL*ARFTVG
Trigger: GCCCACTGTGAACCGTGCCAACAGTGGACAGGCGCA...ATTGCCAGTCTGTATTGAGGGGTGATGTACATGGCCATACAGCCAAATGGGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CAA 90 bp CAAACGTTACAGCCAGATACCAGTCTGCTGGGAAGAGCCGGCACGAGCACGGCAATCTCGCCTTCCAATTaGTTTCTCATGGCCTTGTCC +
Preference number: 5 (lower is better)
Translates to: QTLQPDTSLLGRAGTSTAISPSN*FLMALS
Trigger: GGACAAGGCCATGAGAAACAAATTGGAAGGCGAGAT...TGCCGTGCTCGTGCCGGCTCTTCCCAGCAGACTGGTATCTGGCTGTAACGTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CAA 90 bp CTCAGTTTTCCTGTCTGCACAACAGGTACTCCGATGCTCAGTGTGAGACTAGAGTGTGTGCTGCTGTCCTaGCTGCCTGTCTTGGCGTGG +
Preference number: 5 (lower is better)
Translates to: LSFPVCTTGTPMLSVRLECVLLS*LPVLAW
Trigger: CCACGCCAAGACAGGCAGCAAGGACAGCAGCACACA...CTCTAGTCTCACACTGAGCATCGGAGTACCTGTTGTGCAGACAGGAAAACTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CAA 90 bp ACTCAGGTCAATGGGGAGGAAGAATTTCCCATTCTCTCAGCACCTGGCATGAAGTTCTCTGCGGTCCCTTaGGCCGCTGGGTGTTTCAGG +
Preference number: 5 (lower is better)
Translates to: TQVNGEEEFPILSAPGMKFSAVP*AAGCFR
Trigger: CCTGAAACACCCAGCGGCCAAAGGGACCGCAGAGAA...CTTCATGCCAGGTGCTGAGAGAATGGGAAATTCTTCCTCCCCATTGACCTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CAA 90 bp TCCCCAAACAGAGCAATGGAATTTGGAAATGTCAAGCTCCTTGCAAGACAGCCGGGAGGCAGCCCAAGTTaGGGGTGGCCCAGACCTGAT +
Preference number: 5 (lower is better)
Translates to: SPNRAMEFGNVKLLARQPGGSPS*GWPRPD
Trigger: ATCAGGTCTGGGCCACCCCAAACTTGGGCTGCCTCC...CGGCTGTCTTGCAAGGAGCTTGACATTTCCAAATTCCATTGCTCTGTTTGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS GCA 90 bp GGGACATTTCCGTGTCCCATGAGTGGCAGAGAAGCTGTCTGGTCTTaGTTTTCCAATCATGGTCTGACAGAGGTGTGGGGCTCACCTATG +
Preference number: 5 (lower is better)
Translates to: GTFPCPMSGREAVWS*FSNHGLTEVWGSPM
Trigger: CATAGGTGAGCCCCACACCTCTGTCAGACCATGATTGGAAAAGCAAGACCAGACAGCTTCTCTGCCACTCATGGGACACGGAAATGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537191.1
CDS CCA 90 bp TGGGCGTTGCTCAAAGCCTGGTCCAGGATCTCGATGTGTCTCCGATaGTCCTCACTTGCAGTCCGCACTGCTGCTAACTCCATTTCTAAT +
Preference number: 5 (lower is better)
Translates to: WALLKAWSRISMCLR*SSLAVRTAANSISN
Trigger: ATTAGAAATGGAGTTAGCAGCAGTGCGGACTGCAAGTGAGGACCATCGGAGACACATCGAGATCCTGGACCAGGCTTTGAGCAACGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CAA 90 bp CGTGAAGCCAGGGCCTCTCCCCTTCATCCTGAGATAGGACCCTCAAGTTCTATAAGTTCATGTTCTCGGTaGGGGTGCCATACCGCAGTT +
Preference number: 5 (lower is better)
Translates to: REARASPLHPEIGPSSSISSCSR*GCHTAV
Trigger: AACTGCGGTATGGCACCCCAACCGAGAACATGAACT...TATAGAACTTGAGGGTCCTATCTCAGGATGAAGGGGAGAGGCCCTGGCTTCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CAA 90 bp GCACAATCACATGTAAACACAACACCGGGCATCCAGACTTTGGGGGCTGATACAAGGAGGGCTGGGGCATaGTATTCCGGCATGTTGGCT +
Preference number: 5 (lower is better)
Translates to: AQSHVNTTPGIQTLGADTRRAGA*YSGMLA
Trigger: AGCCAACATGCCGGAATACAATGCCCCAGCCCTCCT...TGTATCAGCCCCCAAAGTCTGGATGCCCGGTGTTGTGTTTACATGTGATTGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CAA 90 bp AGCGATCCAGCTGACCTGGAGGTACAAAAACATCAGGACCCTGTAGGAGCATCTCCATTCCGTGAGTGGTaGATGATCGTGGTGTCCCTC +
Preference number: 5 (lower is better)
Translates to: SDPADLEVQKHQDPVGASPFREW*MIVVSL
Trigger: GAGGGACACCACGATCATCAACCACTCACGGAATGG...AGATGCTCCTACAGGGTCCTGATGTTTTTGTACCTCCAGGTCAGCTGGATCGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CAA 90 bp AGCATCAATATTTGCTGTGGGGGACAGGCAGTGTTCTTGGAATCCCCACACTGGCCATTCCGTGAGTGGTaGATGATCGTGGTGTCCCTC +
Preference number: 5 (lower is better)
Translates to: SINICCGGQAVFLESPHWPFREW*MIVVSL
Trigger: GAGGGACACCACGATCATCAACCACTCACGGAATGG...CCAGTGTGGGGATTCCAAGAACACTGCCTGTCCCCCACAGCAAATATTGATGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CAA 90 bp AGACCCATTTGGCTGTATGGCCATGTACATCACCCCTCAATACAGACTGGCAATTCAGGGAACTCGGGCTaGTGCAGCAAGCTGCTGACC +
Preference number: 5 (lower is better)
Translates to: RPIWLYGHVHHPSIQTGNSGNSG*CSKLLT
Trigger: GGTCAGCAGCTTGCTGCACAAGCCCGAGTTCCCTGA...ATTGCCAGTCTGTATTGAGGGGTGATGTACATGGCCATACAGCCAAATGGGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CAA 90 bp TTCCCCTCGCCCTCGATGCTTCTTCTCACTGCCACACTCACACTCACGGGACACGAAAAACACATCTCTTaGCTCAGCATAACTCCCTGC +
Preference number: 5 (lower is better)
Translates to: FPSPSMLLLTATLTLTGHEKHIS*LSITPC
Trigger: GCAGGGAGTTATGCTGAGCAAAGAGATGTGTTTTTC...GTGTCCCGTGAGTGTGAGTGTGGCAGTGAGAAGAAGCATCGAGGGCGAGGGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CAA 90 bp TCTGGGACTCAGGTCAATGGGGAGGAAGAATTTCCCATTCTCTCAGCACCTGGCCCGGGCATCCAGACTTaGGGGGCTGATACAAGAAAA +
Preference number: 5 (lower is better)
Translates to: SGTQVNGEEEFPILSAPGPGIQT*GADTRK
Trigger: TTTTCTTGTATCAGCCCCCAAAGTCTGGATGCCCGG...GCCAGGTGCTGAGAGAATGGGAAATTCTTCCTCCCCATTGACCTGAGTCCCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CAA 90 bp TTCCCCTCGCCCTCGATGCTTCTTCTCACTGCCACACTCACACTCACGGGACACAGGAGAGGAAAATCTTaGGCTGACCAACAGCATCAA +
Preference number: 5 (lower is better)
Translates to: FPSPSMLLLTATLTLTGHRRGKS*ADQQHQ
Trigger: TTGATGCTGTTGGTCAGCCAAAGATTTTCCTCTCCT...GTGTCCCGTGAGTGTGAGTGTGGCAGTGAGAAGAAGCATCGAGGGCGAGGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS TCA 90 bp CGTATTGTCCACCTGGTGTTCTTGACCCTGCGGTTCTTGGCGTGCTaGCTGGTAGACCATTTGTGGGTCTTCTTGAGTGAGGTTTTCCGT +
Preference number: 5 (lower is better)
Translates to: RIVHLVFLTLRFLAC*LVDHLWVFLSEVFR
Trigger: ACGGAAAACCTCACTCAAGAAGACCCACAAATGGTCTACCAGTCAGCACGCCAAGAACCGCAGGGTCAAGAACACCAGGTGGACAATACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS GCA 90 bp GAGGTTTTCCGTGGAAGAAAAGTTGTTTGTAGGATGGGCTGGTCCTaGACTCCCTGTGGCCTGGTGCTGAATGGCCAGCAAGTTCATGTT +
Preference number: 5 (lower is better)
Translates to: EVFRGRKVVCRMGWS*TPCGLVLNGQQVHV
Trigger: AACATGAACTTGCTGGCCATTCAGCACCAGGCCACAGGGAGTGCAGGACCAGCCCATCCTACAAACAACTTTTCTTCCACGGAAAACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CAA 90 bp CTGGAGTGCTGTCCTAAGTCTTCCCCAAACAGAGCAATGGAATTTGGAAATGTCGGTGCCATACCGCAGTaGTTCCTGGATCAGCCGCTG +
Preference number: 5 (lower is better)
Translates to: LECCPKSSPNRAMEFGNVGAIPQ*FLDQPL
Trigger: CAGCGGCTGATCCAGGAACAACTGCGGTATGGCACC...GACATTTCCAAATTCCATTGCTCTGTTTGGGGAAGACTTAGGACAGCACTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CAA 90 bp CGTGAAGCCAGGGCCTCTCCCCTTCATCCTGAGATAGGACCCTCAAGTTCTATAGACTGGGGACATCATTaGCTTGGTCTTGAAGGGGTA +
Preference number: 5 (lower is better)
Translates to: REARASPLHPEIGPSSSIDWGHH*LGLEGV
Trigger: TACCCCTTCAAGACCAAGCAAATGATGTCCCCAGTC...TATAGAACTTGAGGGTCCTATCTCAGGATGAAGGGGAGAGGCCCTGGCTTCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CAA 90 bp GCACAATCACATGTAAACACAACACCGGGCATCCAGACTTTGGGGGCTGATACATGTGCTGCTGCATGGTaGATGGGAACGGAAGTTGGC +
Preference number: 5 (lower is better)
Translates to: AQSHVNTTPGIQTLGADTCAAAW*MGTEVG
Trigger: GCCAACTTCCGTTCCCATCAACCATGCAGCAGCACA...TGTATCAGCCCCCAAAGTCTGGATGCCCGGTGTTGTGTTTACATGTGATTGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CAA 90 bp AGACCCATTTGGCTGTATGGCCATGTACATCACCCCTCAATACAGACTGGCAATTCCGATGGTCCTCACTaGCAGTCCGCACTGCTGCTA +
Preference number: 5 (lower is better)
Translates to: RPIWLYGHVHHPSIQTGNSDGPH*QSALLL
Trigger: TAGCAGCAGTGCGGACTGCAAGTGAGGACCATCGGA...ATTGCCAGTCTGTATTGAGGGGTGATGTACATGGCCATACAGCCAAATGGGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CAA 90 bp AGCGATCCAGCTGACCTGGAGGTACAAAAACATCAGGACCCTGTAGGAGCATCTTTGTATTCCGGCATGTaGGCTGGCTGGCCATTTCCA +
Preference number: 5 (lower is better)
Translates to: SDPADLEVQKHQDPVGASLYSGM*AGWPFP
Trigger: TGGAAATGGCCAGCCAGCCAACATGCCGGAATACAA...AGATGCTCCTACAGGGTCCTGATGTTTTTGTACCTCCAGGTCAGCTGGATCGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CAA 90 bp TTCCCCTCGCCCTCGATGCTTCTTCTCACTGCCACACTCACACTCACGGGACACACAGAGCAATGGAATTaGGAAATGTCAAGCTCCTTG +
Preference number: 5 (lower is better)
Translates to: FPSPSMLLLTATLTLTGHTEQWN*EMSSSL
Trigger: CAAGGAGCTTGACATTTCCAAATTCCATTGCTCTGT...GTGTCCCGTGAGTGTGAGTGTGGCAGTGAGAAGAAGCATCGAGGGCGAGGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CAA 90 bp GCCCTCGATGCTTCTTCTCACTGCCACACTCACACTCACGGGACACCCCATGGTACAGAGCAATGGAATTaGGAAATGTCAAGCTCCTTG +
Preference number: 5 (lower is better)
Translates to: ALDASSHCHTHTHGTPHGTEQWN*EMSSSL
Trigger: CAAGGAGCTTGACATTTCCAAATTCCATTGCTCTGT...ACCATGGGGTGTCCCGTGAGTGTGAGTGTGGCAGTGAGAAGAAGCATCGAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CAA 90 bp TATCCACTGCTTCTGAGGTCCGCAGCCTCACCTGAAGTCTGTGTCCCTAAGTCTCAACAGCATCAATATTaGCTGTGGGGGACAGGCAGT +
Preference number: 5 (lower is better)
Translates to: YPLLLRSAASPEVCVPKSQQHQY*LWGTGS
Trigger: ACTGCCTGTCCCCCACAGCAAATATTGATGCTGTTG...AGACTTAGGGACACAGACTTCAGGTGAGGCTGCGGACCTCAGAAGCAGTGGATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS TCA 90 bp TACTGTTCCAGCTGCCGCATCCTCGGAACCTCTCATTTCCACCTCTaGGATCCTCAGGAAGTTTGGGGAGTGGAAGTTACAAAGAGGATC +
Preference number: 5 (lower is better)
Translates to: YCSSCRILGTSHFHL*DPQEVWGVEVTKRI
Trigger: GATCCTCTTTGTAACTTCCACTCCCCAAACTTCCTGAGGATCTCAGAGGTGGAAATGAGAGGTTCCGAGGATGCGGCAGCTGGAACAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299004.13
ENST00000317829.12
ENST00000433060.3
CDS CCA 90 bp TATTCAGGGACATTTCCGTGTCCCATGAGTGGCAGAGAAGCTGTCTaGTCTTGCTTTTCCAATCATGGTCTGACAGAGGTGTGGGGCTCA +
Preference number: 5 (lower is better)
Translates to: YSGTFPCPMSGREAV*SCFSNHGLTEVWGS
Trigger: TGAGCCCCACACCTCTGTCAGACCATGATTGGAAAAGCAAGACCAGACAGCTTCTCTGCCACTCATGGGACACGGAAATGTCCCTGAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537191.1
CDS-3UTR CAA 90 bp TCTGGGACTCAGGTCAATGGGGAGGAAGAATTTCCCATTCTCTCAGCACCTGGCCATTTGTGGGTCTTCTaGAGTGAGGTTTTCCGTGGA +
Preference number: 5 (lower is better)
Translates to: SGTQVNGEEEFPILSAPGHLWVF*SEVFRG
Trigger: TCCACGGAAAACCTCACTCAAGAAGACCCACAAATG...GCCAGGTGCTGAGAGAATGGGAAATTCTTCCTCCCCATTGACCTGAGTCCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CAA 90 bp GCACAATCACATGTAAACACAACACCGGGCATCCAGACTTTGGGGGCTGATACATCCAGCGATTCTCGCTaGGTGGTAGACTTGACCAGA +
Preference number: 5 (lower is better)
Translates to: AQSHVNTTPGIQTLGADTSSDSR*VVDLTR
Trigger: TCTGGTCAAGTCTACCACCAAGCGAGAATCGCTGGA...TGTATCAGCCCCCAAAGTCTGGATGCCCGGTGTTGTGTTTACATGTGATTGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CAA 90 bp GCACAATCACATGTAAACACAACACCGGGCATCCAGACTTTGGGGGCTGATACATGCCCCTCTGCAGCTTaGTCTTCATGCCCTTCGTAT +
Preference number: 5 (lower is better)
Translates to: AQSHVNTTPGIQTLGADTCPSAA*SSCPSY
Trigger: ATACGAAGGGCATGAAGACAAAGCTGCAGAGGGGCA...TGTATCAGCCCCCAAAGTCTGGATGCCCGGTGTTGTGTTTACATGTGATTGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CAA 90 bp GTTTCCTGGAGTGCTGTCCTAAGTCTTCCCCAAACAGAGCAATGGAATTTGGAATCCGATGGTCCTCACTaGCAGTCCGCACTGCTGCTA +
Preference number: 5 (lower is better)
Translates to: VSWSAVLSLPQTEQWNLESDGPH*QSALLL
Trigger: TAGCAGCAGTGCGGACTGCAAGTGAGGACCATCGGA...TTCCAAATTCCATTGCTCTGTTTGGGGAAGACTTAGGACAGCACTCCAGGAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CAA 90 bp CTTAAGAGGAGTGCAAGATCATTCAGAGAACACAGAGAAGCATGCTCCACTTACTGTGTGCTGCTGTCCTaGCTGCCTGTCTTGGCGTGG +
Preference number: 5 (lower is better)
Translates to: LKRSARSFREHREACSTYCVLLS*LPVLAW
Trigger: CCACGCCAAGACAGGCAGCAAGGACAGCAGCACACA...GTAAGTGGAGCATGCTTCTCTGTGTTCTCTGAATGATCTTGCACTCCTCTTAAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CAA 90 bp CTTAAGAGGAGTGCAAGATCATTCAGAGAACACAGAGAAGCATGCTCCACTTACTCAGGGAACTCGGGCTaGTGCAGCAAGCTGCTGACC +
Preference number: 5 (lower is better)
Translates to: LKRSARSFREHREACSTYSGNSG*CSKLLT
Trigger: GGTCAGCAGCTTGCTGCACAAGCCCGAGTTCCCTGA...GTAAGTGGAGCATGCTTCTCTGTGTTCTCTGAATGATCTTGCACTCCTCTTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CAA 90 bp TCTGGGACTCAGGTCAATGGGGAGGAAGAATTTCCCATTCTCTCAGCACCTGGCTCTCTGCCGCTTTCCTaGTTTGTCAGTGTTCTGTAC +
Preference number: 5 (lower is better)
Translates to: SGTQVNGEEEFPILSAPGSLPLS*FVSVLY
Trigger: GTACAGAACACTGACAAACAAGGAAAGCGGCAGAGA...GCCAGGTGCTGAGAGAATGGGAAATTCTTCCTCCCCATTGACCTGAGTCCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CAA 90 bp CTCAGTTTTCCTGTCTGCACAACAGGTACTCCGATGCTCAGTGTGAGACTAGAGCTCCACTGGGAAAGTTaGAAGTCCAGGTCTCTGGGA +
Preference number: 5 (lower is better)
Translates to: LSFPVCTTGTPMLSVRLELHWES*KSRSLG
Trigger: TCCCAGAGACCTGGACTTCAAACTTTCCCAGTGGAG...CTCTAGTCTCACACTGAGCATCGGAGTACCTGTTGTGCAGACAGGAAAACTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CAA 90 bp AGCATCAATATTTGCTGTGGGGGACAGGCAGTGTTCTTGGAATCCCCACACTGGGGTACACAGACCCATTaGGCTGTATGGCCATGTACA +
Preference number: 5 (lower is better)
Translates to: SINICCGGQAVFLESPHWGTQTH*AVWPCT
Trigger: TGTACATGGCCATACAGCCAAATGGGTCTGTGTACC...CCAGTGTGGGGATTCCAAGAACACTGCCTGTCCCCCACAGCAAATATTGATGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CAA 90 bp AGCATCAATATTTGCTGTGGGGGACAGGCAGTGTTCTTGGAATCCCCACACTGGTCCGTGGAAGAAAAGTaGTTTGTAGGATGGGCTGGT +
Preference number: 5 (lower is better)
Translates to: SINICCGGQAVFLESPHWSVEEK*FVGWAG
Trigger: ACCAGCCCATCCTACAAACAACTTTTCTTCCACGGA...CCAGTGTGGGGATTCCAAGAACACTGCCTGTCCCCCACAGCAAATATTGATGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CAA 90 bp AGCATCAATATTTGCTGTGGGGGACAGGCAGTGTTCTTGGAATCCCCACACTGGATCATTTGCTTGGTCTaGAAGGGGTACTCAGGTGGA +
Preference number: 5 (lower is better)
Translates to: SINICCGGQAVFLESPHWIICLV*KGYSGG
Trigger: TCCACCTGAGTACCCCTTCAAGACCAAGCAAATGAT...CCAGTGTGGGGATTCCAAGAACACTGCCTGTCCCCCACAGCAAATATTGATGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CAA 90 bp ACTCAGGTCAATGGGGAGGAAGAATTTCCCATTCTCTCAGCACCTGGCATGAAGTTGTTTCTCATGGCCTaGTCCAGCGATTCTCGCTTG +
Preference number: 5 (lower is better)
Translates to: TQVNGEEEFPILSAPGMKLFLMA*SSDSRL
Trigger: CAAGCGAGAATCGCTGGACAAGGCCATGAGAAACAA...CTTCATGCCAGGTGCTGAGAGAATGGGAAATTCTTCCTCCCCATTGACCTGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CAA 90 bp AGCATCAATATTTGCTGTGGGGGACAGGCAGTGTTCTTGGAATCCCCACACTGGATCTCGCCTTCCAATTaGTTTCTCATGGCCTTGTCC +
Preference number: 5 (lower is better)
Translates to: SINICCGGQAVFLESPHWISPSN*FLMALS
Trigger: GGACAAGGCCATGAGAAACAAATTGGAAGGCGAGAT...CCAGTGTGGGGATTCCAAGAACACTGCCTGTCCCCCACAGCAAATATTGATGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CAA 90 bp AGCGATCCAGCTGACCTGGAGGTACAAAAACATCAGGACCCTGTAGGAGCATCTCTGCCTCCTCAAAGCTaGCTTAGTTCACAGTCAGAA +
Preference number: 5 (lower is better)
Translates to: SDPADLEVQKHQDPVGASLPPQS*LSSQSE
Trigger: TTCTGACTGTGAACTAAGCAAGCTTTGAGGAGGCAG...AGATGCTCCTACAGGGTCCTGATGTTTTTGTACCTCCAGGTCAGCTGGATCGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CAA 90 bp TCCCCAAACAGAGCAATGGAATTTGGAAATGTCAAGCTCCTTGCAAGACAGCCGCTCCACTGGGAAAGTTaGAAGTCCAGGTCTCTGGGA +
Preference number: 5 (lower is better)
Translates to: SPNRAMEFGNVKLLARQPLHWES*KSRSLG
Trigger: TCCCAGAGACCTGGACTTCAAACTTTCCCAGTGGAG...CGGCTGTCTTGCAAGGAGCTTGACATTTCCAAATTCCATTGCTCTGTTTGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CAA 90 bp TATAATCAGGCTCCACTGGGAAAGTTTGAAGTCCAGGTCTCTGGGAAGTGCAGACCGGGCATCCAGACTTaGGGGGCTGATACAAGAAAA +
Preference number: 5 (lower is better)
Translates to: YNQAPLGKFEVQVSGKCRPGIQT*GADTRK
Trigger: TTTTCTTGTATCAGCCCCCAAAGTCTGGATGCCCGG...TCTGCACTTCCCAGAGACCTGGACTTCAAACTTTCCCAGTGGAGCCTGATTATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS GCA 90 bp TCTGCAGCTTTGTCTTCATGCCCTTCGTATTCCCTGCTGGATAGTTaGCTGTTAGCAGTCTCTAGTCGATCTCGGAGGTCTCTGTTGAAA +
Preference number: 5 (lower is better)
Translates to: SAALSSCPSYSLLDS*LLAVSSRSRRSLLK
Trigger: TTTCAACAGAGACCTCCGAGATCGACTAGAGACTGCTAACAGGCAACTATCCAGCAGGGAATACGAAGGGCATGAAGACAAAGCTGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS GCA 90 bp AGGCTGGAGGAGTCTGTCTTCCCGGCATCTTTACGAGATCGCTGCTaGAGGACCTTAATCATAGCATCTTTCTCTATGATTTTGGCATGG +
Preference number: 5 (lower is better)
Translates to: RLEESVFPASLRDRC*RTLIIASFSMILAW
Trigger: CCATGCCAAAATCATAGAGAAAGATGCTATGATTAAGGTCCTGCAGCAGCGATCTCGTAAAGATGCCGGGAAGACAGACTCCTCCAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317829.12
ENST00000433060.3
ENST00000537191.1
CDS GCA 90 bp CGTAGGCTGGAGGAGTCTGTCTTCCCGGCATCTTTACGAGATCGCTaGTGCAGGACCTTAATCATAGCATCTTTCTCTATGATTTTGGCA +
Preference number: 5 (lower is better)
Translates to: RRLEESVFPASLRDR*CRTLIIASFSMILA
Trigger: TGCCAAAATCATAGAGAAAGATGCTATGATTAAGGTCCTGCAGCAGCGATCTCGTAAAGATGCCGGGAAGACAGACTCCTCCAGCCTACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317829.12
ENST00000433060.3
ENST00000537191.1
CDS-3UTR CAA 90 bp TCACCTCAATTTGGGGAGGCTATAACTTCACCGGGGTTACACACCCAAGACCAGAGATCCTCAGGAAGTTaGGGGAGTGGAAGTTACAAA +
Preference number: 5 (lower is better)
Translates to: SPQFGEAITSPGLHTQDQRSSGS*GSGSYK
Trigger: TTTGTAACTTCCACTCCCCAAACTTCCTGAGGATCT...CTGGTCTTGGGTGTGTAACCCCGGTGAAGTTATAGCCTCCCCAAATTGAGGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CAA 90 bp AGCGATCCAGCTGACCTGGAGGTACAAAAACATCAGGACCCTGTAGGAGCATCTAGATCCTCAGGAAGTTaGGGGAGTGGAAGTTACAAA +
Preference number: 5 (lower is better)
Translates to: SDPADLEVQKHQDPVGASRSSGS*GSGSYK
Trigger: TTTGTAACTTCCACTCCCCAAACTTCCTGAGGATCT...AGATGCTCCTACAGGGTCCTGATGTTTTTGTACCTCCAGGTCAGCTGGATCGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CAA 90 bp CTCAGTTTTCCTGTCTGCACAACAGGTACTCCGATGCTCAGTGTGAGACTAGAGATCATTTGCTTGGTCTaGAAGGGGTACTCAGGTGGA +
Preference number: 5 (lower is better)
Translates to: LSFPVCTTGTPMLSVRLEIICLV*KGYSGG
Trigger: TCCACCTGAGTACCCCTTCAAGACCAAGCAAATGAT...CTCTAGTCTCACACTGAGCATCGGAGTACCTGTTGTGCAGACAGGAAAACTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CAA 90 bp TCTGGGACTCAGGTCAATGGGGAGGAAGAATTTCCCATTCTCTCAGCACCTGGCAGTTCTTTTTCAAACTaGTGGAGCTTGTCGGCATTG +
Preference number: 5 (lower is better)
Translates to: SGTQVNGEEEFPILSAPGSSFSN*WSLSAL
Trigger: CAATGCCGACAAGCTCCACAAGTTTGAAAAAGAACT...GCCAGGTGCTGAGAGAATGGGAAATTCTTCCTCCCCATTGACCTGAGTCCCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CAA 90 bp GTTTCCTGGAGTGCTGTCCTAAGTCTTCCCCAAACAGAGCAATGGAATTTGGAATCCAGCGATTCTCGCTaGGTGGTAGACTTGACCAGA +
Preference number: 5 (lower is better)
Translates to: VSWSAVLSLPQTEQWNLESSDSR*VVDLTR
Trigger: TCTGGTCAAGTCTACCACCAAGCGAGAATCGCTGGA...TTCCAAATTCCATTGCTCTGTTTGGGGAAGACTTAGGACAGCACTCCAGGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CAA 90 bp TTTACAATGAAAACACTTGGCAGCTCAGGGGGACCTCGAAGAGCAAGCAAGTCTTTGTTTCTCATGGCCTaGTCCAGCGATTCTCGCTTG +
Preference number: 5 (lower is better)
Translates to: FTMKTLGSSGGPRRASKSLFLMA*SSDSRL
Trigger: CAAGCGAGAATCGCTGGACAAGGCCATGAGAAACAA...AGACTTGCTTGCTCTTCGAGGTCCCCCTGAGCTGCCAAGTGTTTTCATTGTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CAA 90 bp CTGGAGTGCTGTCCTAAGTCTTCCCCAAACAGAGCAATGGAATTTGGAAATGTCTGCCCCTCTGCAGCTTaGTCTTCATGCCCTTCGTAT +
Preference number: 5 (lower is better)
Translates to: LECCPKSSPNRAMEFGNVCPSAA*SSCPSY
Trigger: ATACGAAGGGCATGAAGACAAAGCTGCAGAGGGGCA...GACATTTCCAAATTCCATTGCTCTGTTTGGGGAAGACTTAGGACAGCACTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CAA 90 bp TATAATCAGGCTCCACTGGGAAAGTTTGAAGTCCAGGTCTCTGGGAAGTGCAGACTTGAAGTGGACACTTaGAGAGGCTCTGAGGCCAAA +
Preference number: 5 (lower is better)
Translates to: YNQAPLGKFEVQVSGKCRLEVDT*RGSEAK
Trigger: TTTGGCCTCAGAGCCTCTCAAAGTGTCCACTTCAAG...TCTGCACTTCCCAGAGACCTGGACTTCAAACTTTCCCAGTGGAGCCTGATTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CAA 90 bp TATAATCAGGCTCCACTGGGAAAGTTTGAAGTCCAGGTCTCTGGGAAGTGCAGAGGTACACAGACCCATTaGGCTGTATGGCCATGTACA +
Preference number: 5 (lower is better)
Translates to: YNQAPLGKFEVQVSGKCRGTQTH*AVWPCT
Trigger: TGTACATGGCCATACAGCCAAATGGGTCTGTGTACC...TCTGCACTTCCCAGAGACCTGGACTTCAAACTTTCCCAGTGGAGCCTGATTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CAA 90 bp CTTAAGAGGAGTGCAAGATCATTCAGAGAACACAGAGAAGCATGCTCCACTTACGGACAGGCAGTGTTCTaGGAATCCCCACACTGGTAC +
Preference number: 5 (lower is better)
Translates to: LKRSARSFREHREACSTYGQAVF*ESPHWY
Trigger: GTACCAGTGTGGGGATTCCAAGAACACTGCCTGTCC...GTAAGTGGAGCATGCTTCTCTGTGTTCTCTGAATGATCTTGCACTCCTCTTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS CCA 90 bp GAACCTCTCATTTCCACCTCTGAGATCCTCAGGAAGTTTGGGGAGTaGAAGTTACAAAGAGGATCTTCAACTTTCACCGCAGGCTCACAA +
Preference number: 5 (lower is better)
Translates to: EPLISTSEILRKFGE*KLQRGSSTFTAGSQ
Trigger: TTGTGAGCCTGCGGTGAAAGTTGAAGATCCTCTTTGTAACTTCCACTCCCCAAACTTCCTGAGGATCTCAGAGGTGGAAATGAGAGGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317829.12
CDS-3UTR CAA 90 bp TATAATCAGGCTCCACTGGGAAAGTTTGAAGTCCAGGTCTCTGGGAAGTGCAGACTGCCTCCTCAAAGCTaGCTTAGTTCACAGTCAGAA +
Preference number: 5 (lower is better)
Translates to: YNQAPLGKFEVQVSGKCRLPPQS*LSSQSE
Trigger: TTCTGACTGTGAACTAAGCAAGCTTTGAGGAGGCAG...TCTGCACTTCCCAGAGACCTGGACTTCAAACTTTCCCAGTGGAGCCTGATTATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CAA 90 bp TCCCCAAACAGAGCAATGGAATTTGGAAATGTCAAGCTCCTTGCAAGACAGCCGGAAATGTCAAGCTCCTaGCAAGACAGCCGATGTGAA +
Preference number: 5 (lower is better)
Translates to: SPNRAMEFGNVKLLARQPEMSSS*QDSRCE
Trigger: TTCACATCGGCTGTCTTGCAAGGAGCTTGACATTTC...CGGCTGTCTTGCAAGGAGCTTGACATTTCCAAATTCCATTGCTCTGTTTGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CAA 90 bp AGCATCAATATTTGCTGTGGGGGACAGGCAGTGTTCTTGGAATCCCCACACTGGCTGAGTAGCACTCTCTaGAGTGTTTCATTTAGAAGG +
Preference number: 5 (lower is better)
Translates to: SINICCGGQAVFLESPHWLSSTL*SVSFRR
Trigger: CCTTCTAAATGAAACACTCAAGAGAGTGCTACTCAG...CCAGTGTGGGGATTCCAAGAACACTGCCTGTCCCCCACAGCAAATATTGATGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CAA 90 bp CTCAGTTTTCCTGTCTGCACAACAGGTACTCCGATGCTCAGTGTGAGACTAGAGGAAAAACACATCTCTTaGCTCAGCATAACTCCCTGC +
Preference number: 5 (lower is better)
Translates to: LSFPVCTTGTPMLSVRLEEKHIS*LSITPC
Trigger: GCAGGGAGTTATGCTGAGCAAAGAGATGTGTTTTTC...CTCTAGTCTCACACTGAGCATCGGAGTACCTGTTGTGCAGACAGGAAAACTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CAA 90 bp TCTGGGACTCAGGTCAATGGGGAGGAAGAATTTCCCATTCTCTCAGCACCTGGCGGTGAGATGAACACTTaGATCTTCTGTATGTTAGGA +
Preference number: 5 (lower is better)
Translates to: SGTQVNGEEEFPILSAPGGEMNT*IFCMLG
Trigger: TCCTAACATACAGAAGATCAAAGTGTTCATCTCACC...GCCAGGTGCTGAGAGAATGGGAAATTCTTCCTCCCCATTGACCTGAGTCCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CAA 90 bp CTGGAGTGCTGTCCTAAGTCTTCCCCAAACAGAGCAATGGAATTTGGAAATGTCCAACAGCATCAATATTaGCTGTGGGGGACAGGCAGT +
Preference number: 5 (lower is better)
Translates to: LECCPKSSPNRAMEFGNVQQHQY*LWGTGS
Trigger: ACTGCCTGTCCCCCACAGCAAATATTGATGCTGTTG...GACATTTCCAAATTCCATTGCTCTGTTTGGGGAAGACTTAGGACAGCACTCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CAA 90 bp GTTTCCTGGAGTGCTGTCCTAAGTCTTCCCCAAACAGAGCAATGGAATTTGGAACATTTGTGGGTCTTCTaGAGTGAGGTTTTCCGTGGA +
Preference number: 5 (lower is better)
Translates to: VSWSAVLSLPQTEQWNLEHLWVF*SEVFRG
Trigger: TCCACGGAAAACCTCACTCAAGAAGACCCACAAATG...TTCCAAATTCCATTGCTCTGTTTGGGGAAGACTTAGGACAGCACTCCAGGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CAA 90 bp CTTACATTCCGTTTTGTAATAAATACTTACAGGTGTCTCTATGTGAACAGACTCTGCGCCTGTCCACTGTaGGCACGGTTCACAGTGGGC +
Preference number: 5 (lower is better)
Translates to: LTFRFVINTYRCLYVNRLCACPL*ARFTVG
Trigger: GCCCACTGTGAACCGTGCCAACAGTGGACAGGCGCA...GAGTCTGTTCACATAGAGACACCTGTAAGTATTTATTACAAAACGGAATGTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CAA 90 bp GTTTCCTGGAGTGCTGTCCTAAGTCTTCCCCAAACAGAGCAATGGAATTTGGAATCTCTGCCGCTTTCCTaGTTTGTCAGTGTTCTGTAC +
Preference number: 5 (lower is better)
Translates to: VSWSAVLSLPQTEQWNLESLPLS*FVSVLY
Trigger: GTACAGAACACTGACAAACAAGGAAAGCGGCAGAGA...TTCCAAATTCCATTGCTCTGTTTGGGGAAGACTTAGGACAGCACTCCAGGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CAA 90 bp CTTACATTCCGTTTTGTAATAAATACTTACAGGTGTCTCTATGTGAACAGACTCGGAGGCAGCCCAAGTTaGGGGTGGCCCAGACCTGAT +
Preference number: 5 (lower is better)
Translates to: LTFRFVINTYRCLYVNRLGGSPS*GWPRPD
Trigger: ATCAGGTCTGGGCCACCCCAAACTTGGGCTGCCTCC...GAGTCTGTTCACATAGAGACACCTGTAAGTATTTATTACAAAACGGAATGTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CAA 90 bp TATCCACTGCTTCTGAGGTCCGCAGCCTCACCTGAAGTCTGTGTCCCTAAGTCTTATTTACCACACTGTTaGCATACAGTTGACACTAGA +
Preference number: 5 (lower is better)
Translates to: YPLLLRSAASPEVCVPKSYLPHC*HTVDTR
Trigger: TCTAGTGTCAACTGTATGCAAACAGTGTGGTAAATA...AGACTTAGGGACACAGACTTCAGGTGAGGCTGCGGACCTCAGAAGCAGTGGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CAA 90 bp GCACAATCACATGTAAACACAACACCGGGCATCCAGACTTTGGGGGCTGATACATTTGTTGCAACTGTTTaGGTATCCATGCCAAGCCTT +
Preference number: 5 (lower is better)
Translates to: AQSHVNTTPGIQTLGADTFVATV*VSMPSL
Trigger: AAGGCTTGGCATGGATACCAAAACAGTTGCAACAAA...TGTATCAGCCCCCAAAGTCTGGATGCCCGGTGTTGTGTTTACATGTGATTGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CAA 90 bp TCACCTCAATTTGGGGAGGCTATAACTTCACCGGGGTTACACACCCAAGACCAGGGTGAGATGAACACTTaGATCTTCTGTATGTTAGGA +
Preference number: 5 (lower is better)
Translates to: SPQFGEAITSPGLHTQDQGEMNT*IFCMLG
Trigger: TCCTAACATACAGAAGATCAAAGTGTTCATCTCACC...CTGGTCTTGGGTGTGTAACCCCGGTGAAGTTATAGCCTCCCCAAATTGAGGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CAA 90 bp TTTACAATGAAAACACTTGGCAGCTCAGGGGGACCTCGAAGAGCAAGCAAGTCTAGGAGAGGAAAATCTTaGGCTGACCAACAGCATCAA +
Preference number: 5 (lower is better)
Translates to: FTMKTLGSSGGPRRASKSRRGKS*ADQQHQ
Trigger: TTGATGCTGTTGGTCAGCCAAAGATTTTCCTCTCCT...AGACTTGCTTGCTCTTCGAGGTCCCCCTGAGCTGCCAAGTGTTTTCATTGTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS GCA 90 bp GTTACAAAGAGGATCTTCAACAACTTTTTCCCTGATGCTACTGGTTaGCTCCACCGTCAAAGCAGATGTTTCATGCCTCCCAGAATAGAG +
Preference number: 5 (lower is better)
Translates to: VTKRIFNNFFPDATG*LHRQSRCFMPPRIE
Trigger: CTCTATTCTGGGAGGCATGAAACATCTGCTTTGACGGTGGAGGCAACCAGTAGCATCAGGGAAAAAGTTGTTGAAGATCCTCTTTGTAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299004.13
ENST00000433060.3
CDS-3UTR CAA 90 bp CTTACATTCCGTTTTGTAATAAATACTTACAGGTGTCTCTATGTGAACAGACTCGTCCACCTGGTGTTCTaGACCCTGCGGTTCTTGGCG +
Preference number: 5 (lower is better)
Translates to: LTFRFVINTYRCLYVNRLVHLVF*TLRFLA
Trigger: CGCCAAGAACCGCAGGGTCAAGAACACCAGGTGGAC...GAGTCTGTTCACATAGAGACACCTGTAAGTATTTATTACAAAACGGAATGTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CAA 90 bp TTTACAATGAAAACACTTGGCAGCTCAGGGGGACCTCGAAGAGCAAGCAAGTCTAGTTCTTTTTCAAACTaGTGGAGCTTGTCGGCATTG +
Preference number: 5 (lower is better)
Translates to: FTMKTLGSSGGPRRASKSSSFSN*WSLSAL
Trigger: CAATGCCGACAAGCTCCACAAGTTTGAAAAAGAACT...AGACTTGCTTGCTCTTCGAGGTCCCCCTGAGCTGCCAAGTGTTTTCATTGTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CAA 90 bp CTTACATTCCGTTTTGTAATAAATACTTACAGGTGTCTCTATGTGAACAGACTCTTCTCTGCGGTCCCTTaGGCCGCTGGGTGTTTCAGG +
Preference number: 5 (lower is better)
Translates to: LTFRFVINTYRCLYVNRLFSAVP*AAGCFR
Trigger: CCTGAAACACCCAGCGGCCAAAGGGACCGCAGAGAA...GAGTCTGTTCACATAGAGACACCTGTAAGTATTTATTACAAAACGGAATGTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS CCA 90 bp GAACCTCTCATTTCCACCTCTGAGATCCTCAGGAAGTTTGGGGAGTaGAAGTTACAAAGAGGATCTTCAACAACTTTTTCCCTGATGCTA +
Preference number: 5 (lower is better)
Translates to: EPLISTSEILRKFGE*KLQRGSSTTFSLML
Trigger: TAGCATCAGGGAAAAAGTTGTTGAAGATCCTCTTTGTAACTTCCACTCCCCAAACTTCCTGAGGATCTCAGAGGTGGAAATGAGAGGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299004.13
ENST00000433060.3
CDS-3UTR CAA 90 bp TCCCCAAACAGAGCAATGGAATTTGGAAATGTCAAGCTCCTTGCAAGACAGCCGTCCTATTTCTTAACTTaGTTTGCAAACCTACACGCC +
Preference number: 5 (lower is better)
Translates to: SPNRAMEFGNVKLLARQPSYFLT*FANLHA
Trigger: GGCGTGTAGGTTTGCAAACAAAGTTAAGAAATAGGA...CGGCTGTCTTGCAAGGAGCTTGACATTTCCAAATTCCATTGCTCTGTTTGGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CAA 90 bp GAAGCCCTGAAACATGGCGATGTGTCTGTTTACAATGAAAACACTTGGCAGCTCCTGAGTAGCACTCTCTaGAGTGTTTCATTTAGAAGG +
Preference number: 5 (lower is better)
Translates to: EALKHGDVSVYNENTWQLLSSTL*SVSFRR
Trigger: CCTTCTAAATGAAACACTCAAGAGAGTGCTACTCAG...GAGCTGCCAAGTGTTTTCATTGTAAACAGACACATCGCCATGTTTCAGGGCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CAA 90 bp ACTCAGGTCAATGGGGAGGAAGAATTTCCCATTCTCTCAGCACCTGGCATGAAGTATTTACCACACTGTTaGCATACAGTTGACACTAGA +
Preference number: 5 (lower is better)
Translates to: TQVNGEEEFPILSAPGMKYLPHC*HTVDTR
Trigger: TCTAGTGTCAACTGTATGCAAACAGTGTGGTAAATA...CTTCATGCCAGGTGCTGAGAGAATGGGAAATTCTTCCTCCCCATTGACCTGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CAA 90 bp CTTACATTCCGTTTTGTAATAAATACTTACAGGTGTCTCTATGTGAACAGACTCAAGAGCTCGGCACTCTaGTCAGTCTGTGTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: LTFRFVINTYRCLYVNRLKSSAL*SVCVLL
Trigger: CAGCAGCACACAGACTGACAAGAGTGCCGAGCTCTT...GAGTCTGTTCACATAGAGACACCTGTAAGTATTTATTACAAAACGGAATGTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CAA 90 bp GTTTCCTGGAGTGCTGTCCTAAGTCTTCCCCAAACAGAGCAATGGAATTTGGAAACAACTGTCTGTAAATaGTCATCTGTTTCCTGGAGT +
Preference number: 5 (lower is better)
Translates to: VSWSAVLSLPQTEQWNLETTVCK*SSVSWS
Trigger: ACTCCAGGAAACAGATGACAATTTACAGACAGTTGT...TTCCAAATTCCATTGCTCTGTTTGGGGAAGACTTAGGACAGCACTCCAGGAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CAA 90 bp GAAGCCCTGAAACATGGCGATGTGTCTGTTTACAATGAAAACACTTGGCAGCTCACAACTGTCTGTAAATaGTCATCTGTTTCCTGGAGT +
Preference number: 5 (lower is better)
Translates to: EALKHGDVSVYNENTWQLTTVCK*SSVSWS
Trigger: ACTCCAGGAAACAGATGACAATTTACAGACAGTTGT...GAGCTGCCAAGTGTTTTCATTGTAAACAGACACATCGCCATGTTTCAGGGCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS-3UTR CAA 90 bp CTTACATTCCGTTTTGTAATAAATACTTACAGGTGTCTCTATGTGAACAGACTCAGTCGGCACGTGGCTTaGTCCTACTGGTCACTATCA +
Preference number: 5 (lower is better)
Translates to: LTFRFVINTYRCLYVNRLSRHVA*SYWSLS
Trigger: TGATAGTGACCAGTAGGACAAAGCCACGTGCCGACT...GAGTCTGTTCACATAGAGACACCTGTAAGTATTTATTACAAAACGGAATGTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS TCA 90 bp TCTTTAGAATTTACACAATGCTTCCACATATCTATAACTGAAGTATaGCTGATTTCCCTCCCCACTTCACAGATGAGTAAACTGAGACCA +
Preference number: 5 (lower is better)
Translates to: SLEFTQCFHISITEV*LISLPTSQMSKLRP
Trigger: TGGTCTCAGTTTACTCATCTGTGAAGTGGGGAGGGAAATCAGTCATACTTCAGTTATAGATATGTGGAAGCATTGTGTAAATTCTAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537191.1
CDS-3UTR CAA 90 bp CTTACATTCCGTTTTGTAATAAATACTTACAGGTGTCTCTATGTGAACAGACTCTCCTATTTCTTAACTTaGTTTGCAAACCTACACGCC +
Preference number: 5 (lower is better)
Translates to: LTFRFVINTYRCLYVNRLSYFLT*FANLHA
Trigger: GGCGTGTAGGTTTGCAAACAAAGTTAAGAAATAGGA...GAGTCTGTTCACATAGAGACACCTGTAAGTATTTATTACAAAACGGAATGTAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS TCA 72 bp GTCCCTTTGGCCGCTGGGTGTTTCAGGACGGGGCTGTaGGCAGGGGTCGTGCTCAGCCGGCCGCGGCTGGGA +
Preference number: 6 (lower is better)
Translates to: VPLAAGCFRTGL*AGVVLSRPRLG
Trigger: TCCCAGCCGCGGCCGGCTGAGCACGACCCCTGCTCACAGCCCCGTCCTGAAACACCCAGCGGCCAAAGGGAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS GCA 72 bp TGGCCCACCGCCCCCTGCTGCTGTTGCTGCTGCTGCTaGCCCCTGAAGAACTGCGACTGTGCTTTGGCCTCC +
Preference number: 6 (lower is better)
Translates to: WPTAPCCCCCCC*PLKNCDCALAS
Trigger: GGAGGCCAAAGCACAGTCGCAGTTCTTCAGGGGGCAGCAGCAGCAGCAACAGCAGCAGGGGGCGGTGGGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS GCA 72 bp CAGTGGGCCTCCCCTCAGTTCGGGACTTCTGACTGGTaGCCCCTGCCATGTAGTAACCATGGCCCACCGCCC +
Preference number: 6 (lower is better)
Translates to: QWASPQFGTSDW*PLPCSNHGPPP
Trigger: GGGCGGTGGGCCATGGTTACTACATGGCAGGGGGCACCAGTCAGAAGTCCCGAACTGAGGGGAGGCCCACTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS TCA 72 bp CTCCATCAGGGAACTCGGGCTTGTGCAGCAAGCTGCTaGCCCGGCCTCTGTGGTCAGGCGACTTCCCATGGC +
Preference number: 6 (lower is better)
Translates to: LHQGTRACAASC*PGLCGQATSHG
Trigger: GCCATGGGAAGTCGCCTGACCACAGAGGCCGGGTCAGCAGCTTGCTGCACAAGCCCGAGTTCCCTGATGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS CCA 72 bp CCTTCAGCGCCTCGTCCTTATGCGCCTGTCCACTGTTaGCACGGTTCACAGTGGGCCTCCCCTCAGTTCGGG +
Preference number: 6 (lower is better)
Translates to: PSAPRPYAPVHC*HGSQWASPQFG
Trigger: CCCGAACTGAGGGGAGGCCCACTGTGAACCGTGCCAACAGTGGACAGGCGCATAAGGACGAGGCGCTGAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS CCA 72 bp CATGGGCGGCTCGTTACCCCATACTCAGGGGGTGGCTaGTACCGCAGGACGGCCACATCTGTTCTCACAGGC +
Preference number: 6 (lower is better)
Translates to: HGRLVTPYSGGG*YRRTATSVLTG
Trigger: GCCTGTGAGAACAGATGTGGCCGTCCTGCGGTACCAGCCACCCCCTGAGTATGGGGTAACGAGCCGCCCATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS CCA 72 bp GCAGTGGCCCGCTGGCGGAAGAGGTCTGGGAGGACATaGGGCTGTGCTGCTGCATGGTTGATGGGAACGGAA +
Preference number: 6 (lower is better)
Translates to: AVARWRKRSGRT*GCAAAWLMGTE
Trigger: TTCCGTTCCCATCAACCATGCAGCAGCACAGCCCCATGTCCTCCCAGACCTCTTCCGCCAGCGGGCCACTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317829.12
ENST00000433060.3
ENST00000539727.1
CDS CCA 72 bp TCGGGCTTGTGCAGCAAGCTGCTGACCCGGCCTCTGTaGTCAGGCGACTTCCCATGGCCAGGAGAGTTCTCC +
Preference number: 6 (lower is better)
Translates to: SGLCSKLLTRPL*SGDFPWPGEFS
Trigger: GGAGAACTCTCCTGGCCATGGGAAGTCGCCTGACCACAGAGGCCGGGTCAGCAGCTTGCTGCACAAGCCCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS GCA 72 bp GGGCGGCTTGGAGTGTACAGAGGCCAGGGGAGGAGCTaGCTCTCCTGTGGTGTGCACAGAATGCAGTGCATG +
Preference number: 6 (lower is better)
Translates to: GRLGVYRGQGRS*LSCGVHRMQCM
Trigger: CATGCACTGCATTCTGTGCACACCACAGGAGAGGCAGCTCCTCCCCTGGCCTCTGTACACTCCAAGCCGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539727.1
CDS CCA 72 bp TCACAGTGGGCCTCCCCTCAGTTCGGGACTTCTGACTaGTGCCCCCTGCCATGTAGTAACCATGGCCCACCG +
Preference number: 6 (lower is better)
Translates to: SQWASPQFGTSD*CPLPCSNHGPP
Trigger: CGGTGGGCCATGGTTACTACATGGCAGGGGGCACCAGTCAGAAGTCCCGAACTGAGGGGAGGCCCACTGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS CCA 72 bp TTGGCATGGGCGGCTCGTTACCCCATACTCAGGGGGTaGCTGGTACCGCAGGACGGCCACATCTGTTCTCAC +
Preference number: 6 (lower is better)
Translates to: LAWAARYPILRG*LVPQDGHICSH
Trigger: GTGAGAACAGATGTGGCCGTCCTGCGGTACCAGCCACCCCCTGAGTATGGGGTAACGAGCCGCCCATGCCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS CCA 72 bp GGCCAGGAGAGTTCTCCAGTTTCTCTGCGGTCCCTTTaGCCGCTGGGTGTTTCAGGACGGGGCTGTGAGCAG +
Preference number: 6 (lower is better)
Translates to: GQESSPVSLRSL*PLGVSGRGCEQ
Trigger: CTGCTCACAGCCCCGTCCTGAAACACCCAGCGGCCAAAGGGACCGCAGAGAAACTGGAGAACTCTCCTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS CCA 72 bp CTGCTGACCCGGCCTCTGTGGTCAGGCGACTTCCCATaGCCAGGAGAGTTCTCCAGTTTCTCTGCGGTCCCT +
Preference number: 6 (lower is better)
Translates to: LLTRPLWSGDFP*PGEFSSFSAVP
Trigger: AGGGACCGCAGAGAAACTGGAGAACTCTCCTGGCCATGGGAAGTCGCCTGACCACAGAGGCCGGGTCAGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS CCA 72 bp GGGCTGTGCTGCTGCATGGTTGATGGGAACGGAAGTTaGCATGGGCGGCTTGGAGTGTACAGAGGCCAGGGG +
Preference number: 6 (lower is better)
Translates to: GLCCCMVDGNGS*HGRLGVYRGQG
Trigger: CCCCTGGCCTCTGTACACTCCAAGCCGCCCATGCCAACTTCCGTTCCCATCAACCATGCAGCAGCACAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539727.1
CDS CAA 72 bp CATGTAGTAACCATGGCCCACCGCCCCCTGCTGCTGTaGCTGCTGCTGCTGCCCCCTGAAGAACTGCGACTG +
Preference number: 6 (lower is better)
Translates to: HVVTMAHRPLLL*LLLLPPEELRL
Trigger: CAGTCGCAGTTCTTCAGGGGGCAGCAGCAGCAGCAACAGCAGCAGGGGGCGGTGGGCCATGGTTACTACATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS CAA 72 bp TCCTTCAGCGCCTCGTCCTTATGCGCCTGTCCACTGTaGGCACGGTTCACAGTGGGCCTCCCCTCAGTTCGG +
Preference number: 6 (lower is better)
Translates to: SFSASSLCACPL*ARFTVGLPSVR
Trigger: CCGAACTGAGGGGAGGCCCACTGTGAACCGTGCCAACAGTGGACAGGCGCATAAGGACGAGGCGCTGAAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS TCA 72 bp CATCTGTTCTCACAGGCTGAGGAGCAGGGTAGGGCTTaGCCATCTCGTGGAGCATCCCGGGGTGCTGGTCAC +
Preference number: 6 (lower is better)
Translates to: HLFSQAEEQGRA*PSRGASRGAGH
Trigger: GTGACCAGCACCCCGGGATGCTCCACGAGATGGTCAAGCCCTACCCTGCTCCTCAGCCTGTGAGAACAGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS TCA 72 bp GGCCTCCAGCGAGCTCTCTCCGTAGCTGCCATTCCGTaGGTGGTTGATGATCGTGGTGTCCCTCTCAGCTGC +
Preference number: 6 (lower is better)
Translates to: GLQRALSVAAIP*VVDDRGVPLSC
Trigger: GCAGCTGAGAGGGACACCACGATCATCAACCACTCACGGAATGGCAGCTACGGAGAGAGCTCGCTGGAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS GCA 72 bp TGGCCCTGCTTCAGTTCCTTCAGCGCCTCGTCCTTATaGGCCTGTCCACTGTTGGCACGGTTCACAGTGGGC +
Preference number: 6 (lower is better)
Translates to: WPCFSSFSASSL*ACPLLARFTVG
Trigger: GCCCACTGTGAACCGTGCCAACAGTGGACAGGCGCATAAGGACGAGGCGCTGAAGGAACTGAAGCAGGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS CCA 72 bp CCTTATGCGCCTGTCCACTGTTGGCACGGTTCACAGTaGGCCTCCCCTCAGTTCGGGACTTCTGACTGGTGC +
Preference number: 6 (lower is better)
Translates to: PYAPVHCWHGSQ*ASPQFGTSDWC
Trigger: GCACCAGTCAGAAGTCCCGAACTGAGGGGAGGCCCACTGTGAACCGTGCCAACAGTGGACAGGCGCATAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS CCA 72 bp GGGCTGTGCTGCTGCATGGTTGATGGGAACGGAAGTTaGCATGGGCGGCTCGTTACCCCATACTCAGGGGGT +
Preference number: 6 (lower is better)
Translates to: GLCCCMVDGNGS*HGRLVTPYSGG
Trigger: ACCCCCTGAGTATGGGGTAACGAGCCGCCCATGCCAACTTCCGTTCCCATCAACCATGCAGCAGCACAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS CCA 72 bp AGAGTTCTCCAGTTTCTCTGCGGTCCCTTTGGCCGCTaGGTGTTTCAGGACGGGGCTGTGAGCAGGGGTCGT +
Preference number: 6 (lower is better)
Translates to: RVLQFLCGPFGR*VFQDGAVSRGR
Trigger: ACGACCCCTGCTCACAGCCCCGTCCTGAAACACCCAGCGGCCAAAGGGACCGCAGAGAAACTGGAGAACTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS GCA 72 bp GGGGTGCCATACCGCAGTTGTTCCTGGATCAGCCGCTaGAATACTGTTCCAGCTGCCGCATCCTCGGAACCT +
Preference number: 6 (lower is better)
Translates to: GVPYRSCSWISR*NTVPAAASSEP
Trigger: AGGTTCCGAGGATGCGGCAGCTGGAACAGTATTGCAGCGGCTGATCCAGGAACAACTGCGGTATGGCACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299004.13
ENST00000317829.12
ENST00000433060.3
CDS GCA 72 bp ACTTCCATCATCTCTCCATCAGGGAACTCGGGCTTGTaGAGCAAGCTGCTGACCCGGCCTCTGTGGTCAGGC +
Preference number: 6 (lower is better)
Translates to: TSIISPSGNSGL*SKLLTRPLWSG
Trigger: GCCTGACCACAGAGGCCGGGTCAGCAGCTTGCTGCACAAGCCCGAGTTCCCTGATGGAGAGATGATGGAAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS CCA 72 bp GACAGCTGCATGATTCTCTCGCTGAGCGAGCGGACGTaGCCCTGCTTCAGTTCCTTCAGCGCCTCGTCCTTA +
Preference number: 6 (lower is better)
Translates to: DSCMILSLSERT*PCFSSFSASSL
Trigger: TAAGGACGAGGCGCTGAAGGAACTGAAGCAGGGCCACGTCCGCTCGCTCAGCGAGAGAATCATGCAGCTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS CAA 90 bp CCTACTTTGAAGCCCTTTCCATTCCCCGAGCCGGGAAGGTGTTGCTaGGCCCCATTCCTCTCCAGGGACAGCTGCATGATTCTCTCGCTG +
Preference number: 6 (lower is better)
Translates to: PTLKPFPFPEPGRCC*APFLSRDSCMILSL
Trigger: CAGCGAGAGAATCATGCAGCTGTCCCTGGAGAGGAATGGGGCCAAGCAACACCTTCCCGGCTCGGGGAATGGAAAGGGCTTCAAAGTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS CAA 90 bp CCCTCCTACTTTGAAGCCCTTTCCATTCCCCGAGCCGGGAAGGTGTaGCTTGGCCCCATTCCTCTCCAGGGACAGCTGCATGATTCTCTC +
Preference number: 6 (lower is better)
Translates to: PSYFEALSIPRAGKV*LGPIPLQGQLHDSL
Trigger: GAGAGAATCATGCAGCTGTCCCTGGAGAGGAATGGGGCCAAGCAACACCTTCCCGGCTCGGGGAATGGAAAGGGCTTCAAAGTAGGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS CAA 90 bp ATCCGCTCCTCCTTCTCCCGCACAAGTTCCAGGAGGGCTGGGGCATaGTATTCCGGCATGTTGGCTGGCTGGCCATTTCCATGTTTCTGC +
Preference number: 6 (lower is better)
Translates to: IRSSFSRTSSRRAGA*YSGMLAGWPFPCFC
Trigger: GCAGAAACATGGAAATGGCCAGCCAGCCAACATGCCGGAATACAATGCCCCAGCCCTCCTGGAACTTGTGCGGGAGAAGGAGGAGCGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS GCA 72 bp CCGTGCTCCTGGGTCTTGCTGACTGGGGACATCATTTaGTTGGTCTTGAAGGGGTACTCAGGTGGAGGACCC +
Preference number: 6 (lower is better)
Translates to: PCSWVLLTGDII*LVLKGYSGGGP
Trigger: GGGTCCTCCACCTGAGTACCCCTTCAAGACCAAGCAAATGATGTCCCCAGTCAGCAAGACCCAGGAGCACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS CCA 72 bp CTGCTATGGATGGAACGGAGCGGGCAGGACGTAGGCTaGAGGAGTCTGTCTTCCCGGCATCTTTACGAGATC +
Preference number: 6 (lower is better)
Translates to: LLWMERSGQDVG*RSLSSRHLYEI
Trigger: GATCTCGTAAAGATGCCGGGAAGACAGACTCCTCCAGCCTACGTCCTGCCCGCTCCGTTCCATCCATAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317829.12
ENST00000433060.3
ENST00000537191.1
CDS CAA 72 bp AAGCCCTTTCCATTCCCCGAGCCGGGAAGGTGTTGCTaGGCCCCATTCCTCTCCAGGGACAGCTGCATGATT +
Preference number: 6 (lower is better)
Translates to: KPFPFPEPGRCC*APFLSRDSCMI
Trigger: AATCATGCAGCTGTCCCTGGAGAGGAATGGGGCCAAGCAACACCTTCCCGGCTCGGGGAATGGAAAGGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS CAA 72 bp TCCTTCTCCCGCACAAGTTCCAGGAGGGCTGGGGCATaGTATTCCGGCATGTTGGCTGGCTGGCCATTTCCA +
Preference number: 6 (lower is better)
Translates to: SFSRTSSRRAGA*YSGMLAGWPFP
Trigger: TGGAAATGGCCAGCCAGCCAACATGCCGGAATACAATGCCCCAGCCCTCCTGGAACTTGTGCGGGAGAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS CAA 72 bp AGGACTTCCATCATCTCTCCATCAGGGAACTCGGGCTaGTGCAGCAAGCTGCTGACCCGGCCTCTGTGGTCA +
Preference number: 6 (lower is better)
Translates to: RTSIISPSGNSG*CSKLLTRPLWS
Trigger: TGACCACAGAGGCCGGGTCAGCAGCTTGCTGCACAAGCCCGAGTTCCCTGATGGAGAGATGATGGAAGTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS CAA 90 bp TCCCTGTGGCCTGGTGCTGAATGGCCAGCAAGTTCATGTTCTCGGTaGGGGTGCCATACCGCAGTTGTTCCTGGATCAGCCGCTGCAATA +
Preference number: 6 (lower is better)
Translates to: SLWPGAEWPASSCSR*GCHTAVVPGSAAAI
Trigger: TATTGCAGCGGCTGATCCAGGAACAACTGCGGTATGGCACCCCAACCGAGAACATGAACTTGCTGGCCATTCAGCACCAGGCCACAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS CAA 90 bp TCCCGCACAAGTTCCAGGAGGGCTGGGGCATTGTATTCCGGCATGTaGGCTGGCTGGCCATTTCCATGTTTCTGCTGGGTTCTCAGTGCA +
Preference number: 6 (lower is better)
Translates to: SRTSSRRAGALYSGM*AGWPFPCFCWVLSA
Trigger: TGCACTGAGAACCCAGCAGAAACATGGAAATGGCCAGCCAGCCAACATGCCGGAATACAATGCCCCAGCCCTCCTGGAACTTGTGCGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS GCA 72 bp TTTCACCGCAGGCTCACAAGTTCCCCGGCGCAACTTTaGCCTCCACATGAGGCGATCATGGCTAGTTCAGTC +
Preference number: 6 (lower is better)
Translates to: FHRRLTSSPAQL*PPHEAIMASSV
Trigger: GACTGAACTAGCCATGATCGCCTCATGTGGAGGGCAAAGTTGCGCCGGGGAACTTGTGAGCCTGCGGTGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS GCA 72 bp GCTGAATGGCCAGCAAGTTCATGTTCTCGGTTGGGGTaGCATACCGCAGTTGTTCCTGGATCAGCCGCTGCA +
Preference number: 6 (lower is better)
Translates to: AEWPASSCSRLG*HTAVVPGSAAA
Trigger: TGCAGCGGCTGATCCAGGAACAACTGCGGTATGGCACCCCAACCGAGAACATGAACTTGCTGGCCATTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS CCA 72 bp ATGTTCTCGGTTGGGGTGCCATACCGCAGTTGTTCCTaGATCAGCCGCTGCAATACTGTTCCAGCTGCCGCA +
Preference number: 6 (lower is better)
Translates to: MFSVGVPYRSCS*ISRCNTVPAAA
Trigger: TGCGGCAGCTGGAACAGTATTGCAGCGGCTGATCCAGGAACAACTGCGGTATGGCACCCCAACCGAGAACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299004.13
ENST00000317829.12
ENST00000433060.3
CDS CCA 72 bp CTCAAAGCCTGGTCCAGGATCTCGATGTGTCTCCGATaGTCCTCACTTGCAGTCCGCACTGCTGCTAACTCC +
Preference number: 6 (lower is better)
Translates to: LKAWSRISMCLR*SSLAVRTAANS
Trigger: GGAGTTAGCAGCAGTGCGGACTGCAAGTGAGGACCATCGGAGACACATCGAGATCCTGGACCAGGCTTTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS CCA 72 bp CAGGAGGGCTGGGGCATTGTATTCCGGCATGTTGGCTaGCTGGCCATTTCCATGTTTCTGCTGGGTTCTCAG +
Preference number: 6 (lower is better)
Translates to: QEGWGIVFRHVG*LAISMFLLGSQ
Trigger: CTGAGAACCCAGCAGAAACATGGAAATGGCCAGCCAGCCAACATGCCGGAATACAATGCCCCAGCCCTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS CCA 72 bp GTTCCAGGAGGGCTGGGGCATTGTATTCCGGCATGTTaGCTGGCTGGCCATTTCCATGTTTCTGCTGGGTTC +
Preference number: 6 (lower is better)
Translates to: VPGGLGHCIPAC*LAGHFHVSAGF
Trigger: GAACCCAGCAGAAACATGGAAATGGCCAGCCAGCCAACATGCCGGAATACAATGCCCCAGCCCTCCTGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS CAA 72 bp CCTGGTGCTGAATGGCCAGCAAGTTCATGTTCTCGGTaGGGGTGCCATACCGCAGTTGTTCCTGGATCAGCC +
Preference number: 6 (lower is better)
Translates to: PGAEWPASSCSR*GCHTAVVPGSA
Trigger: GGCTGATCCAGGAACAACTGCGGTATGGCACCCCAACCGAGAACATGAACTTGCTGGCCATTCAGCACCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS CAA 90 bp AATGGCCAGCAAGTTCATGTTCTCGGTTGGGGTGCCATACCGCAGTaGTTCCTGGATCAGCCGCTGCAATACTGTTCCAGCTGCCGCATC +
Preference number: 6 (lower is better)
Translates to: NGQQVHVLGWGAIPQ*FLDQPLQYCSSCRI
Trigger: GATGCGGCAGCTGGAACAGTATTGCAGCGGCTGATCCAGGAACAACTGCGGTATGGCACCCCAACCGAGAACATGAACTTGCTGGCCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS GCA 72 bp CGTGGAAGAAAAGTTGTTTGTAGGATGGGCTGGTCCTaGACTCCCTGTGGCCTGGTGCTGAATGGCCAGCAA +
Preference number: 6 (lower is better)
Translates to: RGRKVVCRMGWS*TPCGLVLNGQQ
Trigger: TTGCTGGCCATTCAGCACCAGGCCACAGGGAGTGCAGGACCAGCCCATCCTACAAACAACTTTTCTTCCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS GCA 72 bp TGGCTGGCCATTTCCATGTTTCTGCTGGGTTCTCAGTaGATCCAGCTCTCTCTCCAGCCAAGTCCGCAGTCT +
Preference number: 6 (lower is better)
Translates to: WLAISMFLLGSQ*IQLSLQPSPQS
Trigger: AGACTGCGGACTTGGCTGGAGAGAGAGCTGGATGCACTGAGAACCCAGCAGAAACATGGAAATGGCCAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS GCA 72 bp CCGTGTCCCATGAGTGGCAGAGAAGCTGTCTGGTCTTaGTTTTCCAATCATGGTCTGACAGAGGTGTGGGGC +
Preference number: 6 (lower is better)
Translates to: PCPMSGREAVWS*FSNHGLTEVWG
Trigger: GCCCCACACCTCTGTCAGACCATGATTGGAAAAGCAAGACCAGACAGCTTCTCTGCCACTCATGGGACACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537191.1
CDS CCA 72 bp AAGTGGGCAGTTCCTCGTTGTTCTGCTGAGGCTGCGTaGACCGGACCTGTTTCTCCATCACCGTATTGTCCA +
Preference number: 6 (lower is better)
Translates to: KWAVPRCSAEAA*TGPVSPSPYCP
Trigger: TGGACAATACGGTGATGGAGAAACAGGTCCGGTCCACGCAGCCTCAGCAGAACAACGAGGAACTGCCCACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS CCA 72 bp AGGGCTGGGGCATTGTATTCCGGCATGTTGGCTGGCTaGCCATTTCCATGTTTCTGCTGGGTTCTCAGTGCA +
Preference number: 6 (lower is better)
Translates to: RAGALYSGMLAG*PFPCFCWVLSA
Trigger: TGCACTGAGAACCCAGCAGAAACATGGAAATGGCCAGCCAGCCAACATGCCGGAATACAATGCCCCAGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS CCA 72 bp TTTTCCTCAGCCAGCTGGCTGCTGGTAAGAGAGGTCTaGCGAGAGTGTGTCCCAGTAGCTGCTGCTATGGAT +
Preference number: 6 (lower is better)
Translates to: FSSASWLLVREV*RECVPVAAAMD
Trigger: ATCCATAGCAGCAGCTACTGGGACACACTCTCGCCAGACCTCTCTTACCAGCAGCCAGCTGGCTGAGGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317829.12
ENST00000433060.3
ENST00000537191.1
CDS CAA 72 bp AGTTCCAGGAGGGCTGGGGCATTGTATTCCGGCATGTaGGCTGGCTGGCCATTTCCATGTTTCTGCTGGGTT +
Preference number: 6 (lower is better)
Translates to: SSRRAGALYSGM*AGWPFPCFCWV
Trigger: AACCCAGCAGAAACATGGAAATGGCCAGCCAGCCAACATGCCGGAATACAATGCCCCAGCCCTCCTGGAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS TCA 72 bp CACCTGGTGTTCTTGACCCTGCGGTTCTTGGCGTGCTaGCTGGTAGACCATTTGTGGGTCTTCTTGAGTGAG +
Preference number: 6 (lower is better)
Translates to: HLVFLTLRFLAC*LVDHLWVFLSE
Trigger: CTCACTCAAGAAGACCCACAAATGGTCTACCAGTCAGCACGCCAAGAACCGCAGGGTCAAGAACACCAGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS CAA 72 bp CAAGTTCATGTTCTCGGTTGGGGTGCCATACCGCAGTaGTTCCTGGATCAGCCGCTGCAATACTGTTCCAGC +
Preference number: 6 (lower is better)
Translates to: QVHVLGWGAIPQ*FLDQPLQYCSS
Trigger: GCTGGAACAGTATTGCAGCGGCTGATCCAGGAACAACTGCGGTATGGCACCCCAACCGAGAACATGAACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS CAA 72 bp TCCGTGTCCCATGAGTGGCAGAGAAGCTGTCTGGTCTaGCTTTTCCAATCATGGTCTGACAGAGGTGTGGGG +
Preference number: 6 (lower is better)
Translates to: SVSHEWQRSCLV*LFQSWSDRGVG
Trigger: CCCCACACCTCTGTCAGACCATGATTGGAAAAGCAAGACCAGACAGCTTCTCTGCCACTCATGGGACACGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537191.1
CDS TCA 72 bp AGCTGCCGCATCCTCGGAACCTCTCATTTCCACCTCTaGGATCCTCAGGAAGTTTGGGGAGTGGAAGTTACA +
Preference number: 6 (lower is better)
Translates to: SCRILGTSHFHL*DPQEVWGVEVT
Trigger: TGTAACTTCCACTCCCCAAACTTCCTGAGGATCTCAGAGGTGGAAATGAGAGGTTCCGAGGATGCGGCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299004.13
ENST00000317829.12
ENST00000433060.3
CDS GCA 72 bp AGCACCCGGTTCTCCTCTGTTAATATCTCCACCATTTaGTGGGCTCGCTCCACAATCGCAAAGGCATCTGGA +
Preference number: 6 (lower is better)
Translates to: STRFSSVNISTI*WARSTIAKASG
Trigger: TCCAGATGCCTTTGCGATTGTGGAGCGAGCCCAGCAAATGGTGGAGATATTAACAGAGGAGAACCGGGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317829.12
ENST00000433060.3
ENST00000539727.1
CDS CCA 72 bp AGTAGGTGGAGTCTTCTAGAACCTGGACAGGACTACTaGGGCTATAACAAGCAGAAGGGGACCCTTTCACCG +
Preference number: 6 (lower is better)
Translates to: SRWSLLEPGQDY*GYNKQKGTLSP
Trigger: CGGTGAAAGGGTCCCCTTCTGCTTGTTATAGCCCCAGTAGTCCTGTCCAGGTTCTAGAAGACTCCACCTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433060.3
CDS CAA 90 bp AGGGACATTTCCGTGTCCCATGAGTGGCAGAGAAGCTGTCTGGTCTaGCTTTTCCAATCATGGTCTGACAGAGGTGTGGGGCTCACCTAT +
Preference number: 6 (lower is better)
Translates to: RDISVSHEWQRSCLV*LFQSWSDRGVGLTY
Trigger: ATAGGTGAGCCCCACACCTCTGTCAGACCATGATTGGAAAAGCAAGACCAGACAGCTTCTCTGCCACTCATGGGACACGGAAATGTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537191.1
CDS CCA 72 bp AGTAGGTGGAGTCTTCTAGAACCTGGACAGGACTACTaGGGCTATAACAAGCAGAAGGGGACCCTAACTCGT +
Preference number: 6 (lower is better)
Translates to: SRWSLLEPGQDY*GYNKQKGTLTR
Trigger: ACGAGTTAGGGTCCCCTTCTGCTTGTTATAGCCCCAGTAGTCCTGTCCAGGTTCTAGAAGACTCCACCTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299004.13
CDS CAA 72 bp GGTCCAGGATCTCGATGTGTCTCCGATGGTCCTCACTaGCAGTCCGCACTGCTGCTAACTCCATTTCTAATT +
Preference number: 6 (lower is better)
Translates to: GPGSRCVSDGPH*QSALLLTPFLI
Trigger: AATTAGAAATGGAGTTAGCAGCAGTGCGGACTGCAAGTGAGGACCATCGGAGACACATCGAGATCCTGGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS TCA 72 bp AGACCAGGAACTATTCAGGGACATTTCCGTGTCCCATaGGTGGCAGAGAAGCTGTCTGGTCTTGCTTTTCCA +
Preference number: 6 (lower is better)
Translates to: RPGTIQGHFRVP*VAEKLSGLAFP
Trigger: TGGAAAAGCAAGACCAGACAGCTTCTCTGCCACTCATGGGACACGGAAATGTCCCTGAATAGTTCCTGGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537191.1
CDS GCA 72 bp TTGTCTTCATGCCCTTCGTATTCCCTGCTGGATAGTTaGCTGTTAGCAGTCTCTAGTCGATCTCGGAGGTCT +
Preference number: 6 (lower is better)
Translates to: LSSCPSYSLLDS*LLAVSSRSRRS
Trigger: AGACCTCCGAGATCGACTAGAGACTGCTAACAGGCAACTATCCAGCAGGGAATACGAAGGGCATGAAGACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS CCA 72 bp ACATTTCCGTGTCCCATGAGTGGCAGAGAAGCTGTCTaGTCTTGCTTTTCCAATCATGGTCTGACAGAGGTG +
Preference number: 6 (lower is better)
Translates to: TFPCPMSGREAV*SCFSNHGLTEV
Trigger: CACCTCTGTCAGACCATGATTGGAAAAGCAAGACCAGACAGCTTCTCTGCCACTCATGGGACACGGAAATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537191.1
CDS CAA 90 bp TCAAAGCCTGGTCCAGGATCTCGATGTGTCTCCGATGGTCCTCACTaGCAGTCCGCACTGCTGCTAACTCCATTTCTAATTTCTCCTTTT +
Preference number: 6 (lower is better)
Translates to: SKPGPGSRCVSDGPH*QSALLLTPFLISPF
Trigger: AAAAGGAGAAATTAGAAATGGAGTTAGCAGCAGTGCGGACTGCAAGTGAGGACCATCGGAGACACATCGAGATCCTGGACCAGGCTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS GCA 72 bp GAGGAGTCTGTCTTCCCGGCATCTTTACGAGATCGCTaGTGCAGGACCTTAATCATAGCATCTTTCTCTATG +
Preference number: 6 (lower is better)
Translates to: EESVFPASLRDR*CRTLIIASFSM
Trigger: CATAGAGAAAGATGCTATGATTAAGGTCCTGCAGCAGCGATCTCGTAAAGATGCCGGGAAGACAGACTCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317829.12
ENST00000433060.3
ENST00000537191.1
CDS CCA 72 bp CAGGAACTATTCAGGGACATTTCCGTGTCCCATGAGTaGCAGAGAAGCTGTCTGGTCTTGCTTTTCCAATCA +
Preference number: 6 (lower is better)
Translates to: QELFRDISVSHE*QRSCLVLLFQS
Trigger: TGATTGGAAAAGCAAGACCAGACAGCTTCTCTGCCACTCATGGGACACGGAAATGTCCCTGAATAGTTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537191.1
CDS GCA 72 bp CAAGAATTCTTTGTTCTGGGAAGCATAATGCCCCTCTaGAGCTTTGTCTTCATGCCCTTCGTATTCCCTGCT +
Preference number: 6 (lower is better)
Translates to: QEFFVLGSIMPL*SFVFMPFVFPA
Trigger: AGCAGGGAATACGAAGGGCATGAAGACAAAGCTGCAGAGGGGCATTATGCTTCCCAGAACAAAGAATTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317829.12
ENST00000433060.3
CDS CCA 72 bp TTTAAAAGAAGAAAGGTGACTTCATCCCTGGTGCCGTaGAGTTTAAAAAGAGCAACGAGTGCTGCCTGGCTG +
Preference number: 6 (lower is better)
Translates to: FKRRKVTSSLVP*SLKRATSAAWL
Trigger: CAGCCAGGCAGCACTCGTTGCTCTTTTTAAACTCCACGGCACCAGGGATGAAGTCACCTTTCTTCTTTTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299004.13
CDS CCA 72 bp ATTTCCACCTCTGAGATCCTCAGGAAGTTTGGGGAGTaGAAGTTACAAAGAGGATCTTCAACTTTCACCGCA +
Preference number: 6 (lower is better)
Translates to: ISTSEILRKFGE*KLQRGSSTFTA
Trigger: TGCGGTGAAAGTTGAAGATCCTCTTTGTAACTTCCACTCCCCAAACTTCCTGAGGATCTCAGAGGTGGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317829.12
CDS CAA 72 bp AACCTCTCATTTCCACCTCTGAGATCCTCAGGAAGTTaGGGGAGTGGAAGTTACAAAGAGGATCTTCAACAA +
Preference number: 6 (lower is better)
Translates to: NLSFPPLRSSGS*GSGSYKEDLQQ
Trigger: TTGTTGAAGATCCTCTTTGTAACTTCCACTCCCCAAACTTCCTGAGGATCTCAGAGGTGGAAATGAGAGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299004.13
ENST00000433060.3
CDS CAA 72 bp AACCTCTCATTTCCACCTCTGAGATCCTCAGGAAGTTaGGGGAGTGGAAGTTACAAAGAGGATCTTCAACTT +
Preference number: 6 (lower is better)
Translates to: NLSFPPLRSSGS*GSGSYKEDLQL
Trigger: AAGTTGAAGATCCTCTTTGTAACTTCCACTCCCCAAACTTCCTGAGGATCTCAGAGGTGGAAATGAGAGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317829.12
CDS CCA 72 bp ATTTCCACCTCTGAGATCCTCAGGAAGTTTGGGGAGTaGAAGTTACAAAGAGGATCTTCAACAACTTTTTCC +
Preference number: 6 (lower is better)
Translates to: ISTSEILRKFGE*KLQRGSSTTFS
Trigger: GGAAAAAGTTGTTGAAGATCCTCTTTGTAACTTCCACTCCCCAAACTTCCTGAGGATCTCAGAGGTGGAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299004.13
ENST00000433060.3