Pregenerated sensors for AMN1 (Homo sapiens)
Ensembl gene IDs: ENSG00000151743Ensembl transcript IDs: ENST00000281471.11, ENST00000422146.6, ENST00000457428.6, ENST00000506446.6, ENST00000509386.2, ENST00000535408.5, ENST00000536761.5, ENST00000537562.5, ENST00000537960.5, ENST00000541541.5, ENST00000541931.5, ENST00000542781.5
Found 114 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | TATACATATGCACCACCTTTGCAGTGGCAACATATATATCCACACTATAAACATGCTAAATTTGGGGGTTaGTTTAAGCGTGGTATGTGT | + |
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Preference number: 2 (lower is better) Translates to: YTYAPPLQWQHIYPHYKHAKFGG*FKRGMC Trigger: ACACATACCACGCTTAAACCAACCCCCAAATTTAGC...ATGTTTATAGTGTGGATATATATGTTGCCACTGCAAAGGTGGTGCATATGTATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000281471.11 |
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| 3UTR CAA 90 bp | ATTTCGGTGAAACAAATACCTAAATTCTTTGAAGAATTAACAGGCTaGATGTTCAGGTCTGCTTTTGGCAAATGGGCATTTAAATACTCC | + |
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Preference number: 2 (lower is better) Translates to: ISVKQIPKFFEELTG*MFRSAFGKWAFKYS Trigger: GGAGTATTTAAATGCCCATTTGCCAAAAGCAGACCTGAACATCAAGCCTGTTAATTCTTCAAAGAATTTAGGTATTTGTTTCACCGAAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000281471.11 |
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| 3UTR-3UTR CCA 90 bp | TATACATATGCACCACCTTTGCAGTGGCAACATATATATCCACACTATAAACATGCAAATCTCTATAGATaGTTTCCTGGGAAAGTAGTT | + |
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Preference number: 2 (lower is better) Translates to: YTYAPPLQWQHIYPHYKHANLYR*FPGKVV Trigger: AACTACTTTCCCAGGAAACCATCTATAGAGATTTGC...ATGTTTATAGTGTGGATATATATGTTGCCACTGCAAAGGTGGTGCATATGTATA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000281471.11 |
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| 3UTR-3UTR CCA 90 bp | AACAATAGCTCAAATACCTACATAGGAGAAGGAAATCTCAAGGGAAAACAGTTAGCAAATCTCTATAGATaGTTTCCTGGGAAAGTAGTT | + |
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Preference number: 2 (lower is better) Translates to: NNSSNTYIGEGNLKGKQLANLYR*FPGKVV Trigger: AACTACTTTCCCAGGAAACCATCTATAGAGATTTGC...TAACTGTTTTCCCTTGAGATTTCCTTCTCCTATGTAGGTATTTGAGCTATTGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000281471.11 ENST00000537562.5 |
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| 3UTR-3UTR CCA 90 bp | TATACATATGCACCACCTTTGCAGTGGCAACATATATATCCACACTATAAACATTCTGCTTTTGGCAAATaGGCATTTAAATACTCCAAG | + |
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Preference number: 2 (lower is better) Translates to: YTYAPPLQWQHIYPHYKHSAFGK*AFKYSK Trigger: CTTGGAGTATTTAAATGCCCATTTGCCAAAAGCAGA...ATGTTTATAGTGTGGATATATATGTTGCCACTGCAAAGGTGGTGCATATGTATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000281471.11 |
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| 3UTR TCA 72 bp | TGTGGCTGGGCAAGAGCCTCTGTAATACTAATACGCTaGATGGCTAATAAGTCACTTCATTTCGGTGAAACA | + |
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Preference number: 3 (lower is better) Translates to: CGWARASVILIR*MANKSLHFGET Trigger: TGTTTCACCGAAATGAAGTGACTTATTAGCCATTCAGCGTATTAGTATTACAGAGGCTCTTGCCCAGCCACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000281471.11 |
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| 3UTR-3UTR CAA 90 bp | TATACATATGCACCACCTTTGCAGTGGCAACATATATATCCACACTATAAACATTGTTCAGGTCTGCTTTaGGCAAATGGGCATTTAAAT | + |
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Preference number: 3 (lower is better) Translates to: YTYAPPLQWQHIYPHYKHCSGLL*ANGHLN Trigger: ATTTAAATGCCCATTTGCCAAAAGCAGACCTGAACA...ATGTTTATAGTGTGGATATATATGTTGCCACTGCAAAGGTGGTGCATATGTATA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000281471.11 |
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| CDS-3UTR TCA 90 bp | ATGGCAACCATGACAAAGCTGGGTGGCTATAGAAGAAGGGGGAAACACTTTCCAGATCCAGGAGCTGACTaGCCCGCCGTGGGCGAGGCA | + |
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Preference number: 4 (lower is better) Translates to: MATMTKLGGYRRRGKHFPDPGAD*PAVGEA Trigger: TGCCTCGCCCACGGCGGGTCAGTCAGCTCCTGGATC...TGGAAAGTGTTTCCCCCTTCTTCTATAGCCACCCAGCTTTGTCATGGTTGCCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000542781.5 |
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| CDS-3UTR CCA 90 bp | GCAACCATGACAAAGCTGGGTGGCTATAGAAGAAGGGGGAAACACTTTCCAACTCTGACTGACCCGCCGTaGGCGAGGCATCGCTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: ATMTKLGGYRRRGKHFPTLTDPP*ARHRCS Trigger: GCTGCAGCGATGCCTCGCCCACGGCGGGTCAGTCAG...AGTTGGAAAGTGTTTCCCCCTTCTTCTATAGCCACCCAGCTTTGTCATGGTTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000542781.5 |
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| CDS-3UTR TCA 90 bp | GCAACCATGACAAAGCTGGGTGGCTATAGAAGAAGGGGGAAACACTTTCCAACTTCAAGATCCAGGAGCTaGCTGACCCGCCGTGGGCGA | + |
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Preference number: 4 (lower is better) Translates to: ATMTKLGGYRRRGKHFPTSRSRS*LTRRGR Trigger: TCGCCCACGGCGGGTCAGTCAGCTCCTGGATCTTGA...AGTTGGAAAGTGTTTCCCCCTTCTTCTATAGCCACCCAGCTTTGTCATGGTTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000542781.5 |
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| CDS-3UTR CCA 90 bp | ATGGCAACCATGACAAAGCTGGGTGGCTATAGAAGAAGGGGGAAACACTTTCCACTGGGAGCTGCAGACTaGAGCTGTTCCCATTTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: MATMTKLGGYRRRGKHFPLGAAD*SCSHLA Trigger: GGCTAAATGGGAACAGCTCCAGTCTGCAGCTCCCAG...TGGAAAGTGTTTCCCCCTTCTTCTATAGCCACCCAGCTTTGTCATGGTTGCCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000542781.5 |
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| CDS-3UTR TCA 90 bp | TGGTTTCCTGGGAAAGTAGTTTTGATAAGCTTTCCTAGCATTGATCATCTTCAAGATCCAGGAGCTGACTaGCCCGCCGTGGGCGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: WFPGKVVLISFPSIDHLQDPGAD*PAVGEA Trigger: TGCCTCGCCCACGGCGGGTCAGTCAGCTCCTGGATC...TTGAAGATGATCAATGCTAGGAAAGCTTATCAAAACTACTTTCCCAGGAAACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000281471.11 ENST00000537562.5 ENST00000541931.5 |
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| CDS-3UTR CCA 90 bp | TGGTTTCCTGGGAAAGTAGTTTTGATAAGCTTTCCTAGCATTGATCATCTTCAACTGACTGACCCGCCGTaGGCGAGGCATCGCTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: WFPGKVVLISFPSIDHLQLTDPP*ARHRCS Trigger: GCTGCAGCGATGCCTCGCCCACGGCGGGTCAGTCAG...TTGAAGATGATCAATGCTAGGAAAGCTTATCAAAACTACTTTCCCAGGAAACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000281471.11 ENST00000541931.5 |
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| CDS-3UTR CCA 90 bp | ACCATGACAAAGCTGGGTGGCTATAGAAGAAGGGGGAAACACTTTCCAACTCTTCTGCGTCAATCTTGCTaGGAGCTGCAGACTGGAGCT | + |
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Preference number: 4 (lower is better) Translates to: TMTKLGGYRRRGKHFPTLLRQSC*ELQTGA Trigger: AGCTCCAGTCTGCAGCTCCCAGCAAGATTGACGCAG...AAGAGTTGGAAAGTGTTTCCCCCTTCTTCTATAGCCACCCAGCTTTGTCATGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000542781.5 |
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| CDS-3UTR TCA 90 bp | TATAGATGGTTTCCTGGGAAAGTAGTTTTGATAAGCTTTCCTAGCATTGATCATGATCCAGGAGCTGACTaGCCCGCCGTGGGCGAGGCA | + |
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Preference number: 4 (lower is better) Translates to: YRWFPGKVVLISFPSIDHDPGAD*PAVGEA Trigger: TGCCTCGCCCACGGCGGGTCAGTCAGCTCCTGGATC...ATGATCAATGCTAGGAAAGCTTATCAAAACTACTTTCCCAGGAAACCATCTATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000281471.11 ENST00000537562.5 ENST00000541931.5 |
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| CDS-3UTR TCA 90 bp | GCAACCATGACAAAGCTGGGTGGCTATAGAAGAAGGGGGAAACACTTTCCAACTTTAGCAGCTGGCAATTaGGTGCAAGAGCAACGACTC | + |
|
Preference number: 4 (lower is better) Translates to: ATMTKLGGYRRRGKHFPTLAAGN*VQEQRL Trigger: GAGTCGTTGCTCTTGCACTCAATTGCCAGCTGCTAA...AGTTGGAAAGTGTTTCCCCCTTCTTCTATAGCCACCCAGCTTTGTCATGGTTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000542781.5 |
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| CDS-3UTR GCA 90 bp | ATGGCAACCATGACAAAGCTGGGTGGCTATAGAAGAAGGGGGAAACACTTTCCACAGCTGGCAATTGAGTaGAAGAGCAACGACTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: MATMTKLGGYRRRGKHFPQLAIE*KSNDSF Trigger: GAAGGAGTCGTTGCTCTTGCACTCAATTGCCAGCTG...TGGAAAGTGTTTCCCCCTTCTTCTATAGCCACCCAGCTTTGTCATGGTTGCCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000542781.5 |
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| CDS-3UTR CCA 90 bp | TATACATATGCACCACCTTTGCAGTGGCAACATATATATCCACACTATAAACATCTGACTGACCCGCCGTaGGCGAGGCATCGCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: YTYAPPLQWQHIYPHYKHLTDPP*ARHRCS Trigger: GCTGCAGCGATGCCTCGCCCACGGCGGGTCAGTCAG...ATGTTTATAGTGTGGATATATATGTTGCCACTGCAAAGGTGGTGCATATGTATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000281471.11 |
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| CDS-3UTR TCA 90 bp | ATGGCAACCATGACAAAGCTGGGTGGCTATAGAAGAAGGGGGAAACACTTTCCACGACTCCTTCGTCAGTaGGATTGCAGCATCTTTTCA | + |
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Preference number: 4 (lower is better) Translates to: MATMTKLGGYRRRGKHFPRLLRQ*DCSIFS Trigger: TGAAAAGATGCTGCAATCTCACTGACGAAGGAGTCG...TGGAAAGTGTTTCCCCCTTCTTCTATAGCCACCCAGCTTTGTCATGGTTGCCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000542781.5 |
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| CDS-3UTR TCA 90 bp | ATGGCAACCATGACAAAGCTGGGTGGCTATAGAAGAAGGGGGAAACACTTTCCACCACTGTCAGATACCTaGGTAGCTGAAAAGTCGACA | + |
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Preference number: 4 (lower is better) Translates to: MATMTKLGGYRRRGKHFPPLSDT*VAEKST Trigger: TGTCGACTTTTCAGCTACTCAGGTATCTGACAGTGG...TGGAAAGTGTTTCCCCCTTCTTCTATAGCCACCCAGCTTTGTCATGGTTGCCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000542781.5 |
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| CDS-3UTR TCA 90 bp | TATAGATGGTTTCCTGGGAAAGTAGTTTTGATAAGCTTTCCTAGCATTGATCATCATCGCTGCAGCGTCTaGAGCCTCTTCCGCGGTCCC | + |
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Preference number: 4 (lower is better) Translates to: YRWFPGKVVLISFPSIDHHRCSV*SLFRGP Trigger: GGGACCGCGGAAGAGGCTTCAGACGCTGCAGCGATG...ATGATCAATGCTAGGAAAGCTTATCAAAACTACTTTCCCAGGAAACCATCTATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000541931.5 |
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| CDS-3UTR TCA 90 bp | TGGTTTCCTGGGAAAGTAGTTTTGATAAGCTTTCCTAGCATTGATCATCTTCAATCAAGATCCAGGAGCTaGCTGACCCGCCGTGGGCGA | + |
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Preference number: 4 (lower is better) Translates to: WFPGKVVLISFPSIDHLQSRSRS*LTRRGR Trigger: TCGCCCACGGCGGGTCAGTCAGCTCCTGGATCTTGA...TTGAAGATGATCAATGCTAGGAAAGCTTATCAAAACTACTTTCCCAGGAAACCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000537562.5 |
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| CDS-3UTR TCA 90 bp | ATGGCAACCATGACAAAGCTGGGTGGCTATAGAAGAAGGGGGAAACACTTTCCATTCCAACTCTTTCTGTaGGGCCAGTGTTACCCTGTT | + |
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Preference number: 4 (lower is better) Translates to: MATMTKLGGYRRRGKHFPFQLFL*GQCYPV Trigger: AACAGGGTAACACTGGCCTCACAGAAAGAGTTGGAA...TGGAAAGTGTTTCCCCCTTCTTCTATAGCCACCCAGCTTTGTCATGGTTGCCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000542781.5 |
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| CDS-3UTR TCA 90 bp | AACAATAGCTCAAATACCTACATAGGAGAAGGAAATCTCAAGGGAAAACAGTTACATAGATCCAGGAGCTaGCTGACCCGCCGTGGGCGA | + |
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Preference number: 4 (lower is better) Translates to: NNSSNTYIGEGNLKGKQLHRSRS*LTRRGR Trigger: TCGCCCACGGCGGGTCAGTCAGCTCCTGGATCTATG...TAACTGTTTTCCCTTGAGATTTCCTTCTCCTATGTAGGTATTTGAGCTATTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000281471.11 |
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| CDS-3UTR TCA 90 bp | GCAACCATGACAAAGCTGGGTGGCTATAGAAGAAGGGGGAAACACTTTCCAACTAGCCACCTAAATCGATaGTCTTTAGCAGCTGGCAAT | + |
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Preference number: 4 (lower is better) Translates to: ATMTKLGGYRRRGKHFPTSHLNR*SLAAGN Trigger: ATTGCCAGCTGCTAAAGATCATCGATTTAGGTGGCT...AGTTGGAAAGTGTTTCCCCCTTCTTCTATAGCCACCCAGCTTTGTCATGGTTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000542781.5 |
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| CDS-3UTR TCA 90 bp | GCAACCATGACAAAGCTGGGTGGCTATAGAAGAAGGGGGAAACACTTTCCAACTAGATACCTGAGTAGCTaGAAAGTCGACACACTGCAA | + |
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Preference number: 4 (lower is better) Translates to: ATMTKLGGYRRRGKHFPTRYLSS*KVDTLQ Trigger: TTGCAGTGTGTCGACTTTTCAGCTACTCAGGTATCT...AGTTGGAAAGTGTTTCCCCCTTCTTCTATAGCCACCCAGCTTTGTCATGGTTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000542781.5 |
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| CDS-3UTR TCA 90 bp | TATAGATGGTTTCCTGGGAAAGTAGTTTTGATAAGCTTTCCTAGCATTGATCATAATAGATCCAGGAGCTaGCTGACCCGCCGTGGGCGA | + |
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Preference number: 4 (lower is better) Translates to: YRWFPGKVVLISFPSIDHNRSRS*LTRRGR Trigger: TCGCCCACGGCGGGTCAGTCAGCTCCTGGATCTATT...ATGATCAATGCTAGGAAAGCTTATCAAAACTACTTTCCCAGGAAACCATCTATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000541931.5 |
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| CDS-3UTR TCA 90 bp | TGGTTTCCTGGGAAAGTAGTTTTGATAAGCTTTCCTAGCATTGATCATCTTCAACTGGGATTACAGGCATaGGCCTTGTGCTCGGCCTTA | + |
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Preference number: 4 (lower is better) Translates to: WFPGKVVLISFPSIDHLQLGLQA*ALCSAL Trigger: TAAGGCCGAGCACAAGGCTCATGCCTGTAATCCCAG...TTGAAGATGATCAATGCTAGGAAAGCTTATCAAAACTACTTTCCCAGGAAACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000537562.5 |
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| CDS-3UTR TCA 90 bp | ATGGCAACCATGACAAAGCTGGGTGGCTATAGAAGAAGGGGGAAACACTTTCCAACACAATGTCCCATATaGATCTCCTCTAATTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: MATMTKLGGYRRRGKHFPTQCPI*ISSNFF Trigger: GAAGAAATTAGAGGAGATTCATATGGGACATTGTGT...TGGAAAGTGTTTCCCCCTTCTTCTATAGCCACCCAGCTTTGTCATGGTTGCCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000542781.5 |
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| CDS-3UTR CCA 90 bp | TATAGATGGTTTCCTGGGAAAGTAGTTTTGATAAGCTTTCCTAGCATTGATCATCTGGGAGCTGCAGACTaGAGCTGTTCCCATTTAGCC | + |
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Preference number: 4 (lower is better) Translates to: YRWFPGKVVLISFPSIDHLGAAD*SCSHLA Trigger: GGCTAAATGGGAACAGCTCCAGTCTGCAGCTCCCAG...ATGATCAATGCTAGGAAAGCTTATCAAAACTACTTTCCCAGGAAACCATCTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000537562.5 |
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| CDS-3UTR CCA 90 bp | AACAATAGCTCAAATACCTACATAGGAGAAGGAAATCTCAAGGGAAAACAGTTACTGCGTCAATCTTGCTaGGAGCTGCAGACTGGAGCT | + |
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Preference number: 4 (lower is better) Translates to: NNSSNTYIGEGNLKGKQLLRQSC*ELQTGA Trigger: AGCTCCAGTCTGCAGCTCCCAGCAAGATTGACGCAG...TAACTGTTTTCCCTTGAGATTTCCTTCTCCTATGTAGGTATTTGAGCTATTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000537562.5 |
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| CDS-3UTR TCA 90 bp | ACCATGACAAAGCTGGGTGGCTATAGAAGAAGGGGGAAACACTTTCCAACTCTTAGCTTTTATTCCTTCTaGAGTTACAGAAACTCGGTT | + |
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Preference number: 4 (lower is better) Translates to: TMTKLGGYRRRGKHFPTLSFYSF*SYRNSV Trigger: AACCGAGTTTCTGTAACTTCAGAAGGAATAAAAGCT...AAGAGTTGGAAAGTGTTTCCCCCTTCTTCTATAGCCACCCAGCTTTGTCATGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000542781.5 |
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| CDS-3UTR TCA 90 bp | GAATTAACAGGCTTGATGTTCAGGTCTGCTTTTGGCAAATGGGCATTTAAATACCGACTCCTTCGTCAGTaGGATTGCAGCATCTTTTCA | + |
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Preference number: 4 (lower is better) Translates to: ELTGLMFRSAFGKWAFKYRLLRQ*DCSIFS Trigger: TGAAAAGATGCTGCAATCTCACTGACGAAGGAGTCG...GTATTTAAATGCCCATTTGCCAAAAGCAGACCTGAACATCAAGCCTGTTAATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000281471.11 |
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| CDS-3UTR TCA 90 bp | TGGTTTCCTGGGAAAGTAGTTTTGATAAGCTTTCCTAGCATTGATCATCTTCAATTAGCAGCTGGCAATTaGGTGCAAGAGCAACGACTC | + |
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Preference number: 4 (lower is better) Translates to: WFPGKVVLISFPSIDHLQLAAGN*VQEQRL Trigger: GAGTCGTTGCTCTTGCACTCAATTGCCAGCTGCTAA...TTGAAGATGATCAATGCTAGGAAAGCTTATCAAAACTACTTTCCCAGGAAACCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000281471.11 ENST00000537562.5 ENST00000541931.5 |
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| CDS-3UTR GCA 90 bp | TGGTTTCCTGGGAAAGTAGTTTTGATAAGCTTTCCTAGCATTGATCATCTTCAACAGCTGGCAATTGAGTaGAAGAGCAACGACTCCTTC | + |
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Preference number: 4 (lower is better) Translates to: WFPGKVVLISFPSIDHLQQLAIE*KSNDSF Trigger: GAAGGAGTCGTTGCTCTTGCACTCAATTGCCAGCTG...TTGAAGATGATCAATGCTAGGAAAGCTTATCAAAACTACTTTCCCAGGAAACCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000281471.11 ENST00000537562.5 ENST00000541931.5 |
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| CDS-3UTR CCA 90 bp | ACCATGACAAAGCTGGGTGGCTATAGAAGAAGGGGGAAACACTTTCCAACTCTTATCAAGGGGCATCCATaGAAGAGTAATATACGTATT | + |
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Preference number: 4 (lower is better) Translates to: TMTKLGGYRRRGKHFPTLIKGHP*KSNIRI Trigger: AATACGTATATTACTCTTCCATGGATGCCCCTTGAT...AAGAGTTGGAAAGTGTTTCCCCCTTCTTCTATAGCCACCCAGCTTTGTCATGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000542781.5 |
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| CDS-3UTR CCA 90 bp | GAATTAACAGGCTTGATGTTCAGGTCTGCTTTTGGCAAATGGGCATTTAAATACATCAATGAATGGATGTaGCTGGGCAAGAGCCTCTGT | + |
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Preference number: 4 (lower is better) Translates to: ELTGLMFRSAFGKWAFKYINEWM*LGKSLC Trigger: ACAGAGGCTCTTGCCCAGCCACATCCATTCATTGAT...GTATTTAAATGCCCATTTGCCAAAAGCAGACCTGAACATCAAGCCTGTTAATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000281471.11 |
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| CDS-3UTR TCA 90 bp | TGGTTTCCTGGGAAAGTAGTTTTGATAAGCTTTCCTAGCATTGATCATCTTCAACGACTCCTTCGTCAGTaGGATTGCAGCATCTTTTCA | + |
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Preference number: 4 (lower is better) Translates to: WFPGKVVLISFPSIDHLQRLLRQ*DCSIFS Trigger: TGAAAAGATGCTGCAATCTCACTGACGAAGGAGTCG...TTGAAGATGATCAATGCTAGGAAAGCTTATCAAAACTACTTTCCCAGGAAACCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000281471.11 ENST00000537562.5 ENST00000541931.5 |
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| CDS-3UTR TCA 90 bp | TATAGATGGTTTCCTGGGAAAGTAGTTTTGATAAGCTTTCCTAGCATTGATCATTTAGCAGCTGGCAATTaGGTGCAAGAGCAACGACTC | + |
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Preference number: 4 (lower is better) Translates to: YRWFPGKVVLISFPSIDHLAAGN*VQEQRL Trigger: GAGTCGTTGCTCTTGCACTCAATTGCCAGCTGCTAA...ATGATCAATGCTAGGAAAGCTTATCAAAACTACTTTCCCAGGAAACCATCTATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000281471.11 ENST00000537562.5 ENST00000541931.5 |
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| CDS-3UTR TCA 90 bp | TGGTTTCCTGGGAAAGTAGTTTTGATAAGCTTTCCTAGCATTGATCATCTTCAACCACTGTCAGATACCTaGGTAGCTGAAAAGTCGACA | + |
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Preference number: 4 (lower is better) Translates to: WFPGKVVLISFPSIDHLQPLSDT*VAEKST Trigger: TGTCGACTTTTCAGCTACTCAGGTATCTGACAGTGG...TTGAAGATGATCAATGCTAGGAAAGCTTATCAAAACTACTTTCCCAGGAAACCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000281471.11 ENST00000537562.5 ENST00000541931.5 |
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| CDS-3UTR GCA 90 bp | AACAATAGCTCAAATACCTACATAGGAGAAGGAAATCTCAAGGGAAAACAGTTACAGCTGGCAATTGAGTaGAAGAGCAACGACTCCTTC | + |
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Preference number: 4 (lower is better) Translates to: NNSSNTYIGEGNLKGKQLQLAIE*KSNDSF Trigger: GAAGGAGTCGTTGCTCTTGCACTCAATTGCCAGCTG...TAACTGTTTTCCCTTGAGATTTCCTTCTCCTATGTAGGTATTTGAGCTATTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000281471.11 ENST00000537562.5 |
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| CDS-3UTR GCA 90 bp | TATAGATGGTTTCCTGGGAAAGTAGTTTTGATAAGCTTTCCTAGCATTGATCATCAGCTGGCAATTGAGTaGAAGAGCAACGACTCCTTC | + |
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Preference number: 4 (lower is better) Translates to: YRWFPGKVVLISFPSIDHQLAIE*KSNDSF Trigger: GAAGGAGTCGTTGCTCTTGCACTCAATTGCCAGCTG...ATGATCAATGCTAGGAAAGCTTATCAAAACTACTTTCCCAGGAAACCATCTATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000281471.11 ENST00000537562.5 ENST00000541931.5 |
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| CDS-3UTR CCA 90 bp | GAATTAACAGGCTTGATGTTCAGGTCTGCTTTTGGCAAATGGGCATTTAAATACGCACCACCTTTGCAGTaGCAACATATATATCCACAC | + |
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Preference number: 4 (lower is better) Translates to: ELTGLMFRSAFGKWAFKYAPPLQ*QHIYPH Trigger: GTGTGGATATATATGTTGCCACTGCAAAGGTGGTGC...GTATTTAAATGCCCATTTGCCAAAAGCAGACCTGAACATCAAGCCTGTTAATTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000281471.11 |
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| CDS-3UTR TCA 90 bp | TATAGATGGTTTCCTGGGAAAGTAGTTTTGATAAGCTTTCCTAGCATTGATCATCGACTCCTTCGTCAGTaGGATTGCAGCATCTTTTCA | + |
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Preference number: 4 (lower is better) Translates to: YRWFPGKVVLISFPSIDHRLLRQ*DCSIFS Trigger: TGAAAAGATGCTGCAATCTCACTGACGAAGGAGTCG...ATGATCAATGCTAGGAAAGCTTATCAAAACTACTTTCCCAGGAAACCATCTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000281471.11 ENST00000537562.5 ENST00000541931.5 |
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| CDS-3UTR TCA 90 bp | TGGTTTCCTGGGAAAGTAGTTTTGATAAGCTTTCCTAGCATTGATCATCTTCAAAGATACCTGAGTAGCTaGAAAGTCGACACACTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: WFPGKVVLISFPSIDHLQRYLSS*KVDTLQ Trigger: TTGCAGTGTGTCGACTTTTCAGCTACTCAGGTATCT...TTGAAGATGATCAATGCTAGGAAAGCTTATCAAAACTACTTTCCCAGGAAACCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000281471.11 ENST00000537562.5 ENST00000541931.5 |
||
| CDS-3UTR TCA 90 bp | TATAGATGGTTTCCTGGGAAAGTAGTTTTGATAAGCTTTCCTAGCATTGATCATCCACTGTCAGATACCTaGGTAGCTGAAAAGTCGACA | + |
|
Preference number: 4 (lower is better) Translates to: YRWFPGKVVLISFPSIDHPLSDT*VAEKST Trigger: TGTCGACTTTTCAGCTACTCAGGTATCTGACAGTGG...ATGATCAATGCTAGGAAAGCTTATCAAAACTACTTTCCCAGGAAACCATCTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000281471.11 ENST00000537562.5 ENST00000541931.5 |
||
| CDS-3UTR GCA 90 bp | TGGTTTCCTGGGAAAGTAGTTTTGATAAGCTTTCCTAGCATTGATCATCTTCAAAGGTCCACTAACAAGTaGAATCACACCACTGTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: WFPGKVVLISFPSIDHLQRSTNK*NHTTVR Trigger: TCTGACAGTGGTGTGATTGCACTTGTTAGTGGACCT...TTGAAGATGATCAATGCTAGGAAAGCTTATCAAAACTACTTTCCCAGGAAACCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000281471.11 ENST00000537562.5 ENST00000541931.5 |
||
| CDS-3UTR GCA 90 bp | TGGTTTCCTGGGAAAGTAGTTTTGATAAGCTTTCCTAGCATTGATCATCTTCAATTTGGGCCTACTAATTaGTCCAACACTTCTCGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: WFPGKVVLISFPSIDHLQFGPTN*SNTSRE Trigger: TTCCCGAGAAGTGTTGGAGCAATTAGTAGGCCCAAA...TTGAAGATGATCAATGCTAGGAAAGCTTATCAAAACTACTTTCCCAGGAAACCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000281471.11 ENST00000537562.5 ENST00000541931.5 |
||
| CDS-3UTR TCA 90 bp | TATAGATGGTTTCCTGGGAAAGTAGTTTTGATAAGCTTTCCTAGCATTGATCATAGCCACCTAAATCGATaGTCTTTAGCAGCTGGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: YRWFPGKVVLISFPSIDHSHLNR*SLAAGN Trigger: ATTGCCAGCTGCTAAAGATCATCGATTTAGGTGGCT...ATGATCAATGCTAGGAAAGCTTATCAAAACTACTTTCCCAGGAAACCATCTATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000281471.11 ENST00000537562.5 ENST00000541931.5 |
||
| CDS-3UTR TCA 90 bp | AACAATAGCTCAAATACCTACATAGGAGAAGGAAATCTCAAGGGAAAACAGTTAAGCCACCTAAATCGATaGTCTTTAGCAGCTGGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: NNSSNTYIGEGNLKGKQLSHLNR*SLAAGN Trigger: ATTGCCAGCTGCTAAAGATCATCGATTTAGGTGGCT...TAACTGTTTTCCCTTGAGATTTCCTTCTCCTATGTAGGTATTTGAGCTATTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000281471.11 ENST00000537562.5 |
||
| CDS-3UTR TCA 90 bp | AACAATAGCTCAAATACCTACATAGGAGAAGGAAATCTCAAGGGAAAACAGTTAAGATACCTGAGTAGCTaGAAAGTCGACACACTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: NNSSNTYIGEGNLKGKQLRYLSS*KVDTLQ Trigger: TTGCAGTGTGTCGACTTTTCAGCTACTCAGGTATCT...TAACTGTTTTCCCTTGAGATTTCCTTCTCCTATGTAGGTATTTGAGCTATTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000281471.11 ENST00000537562.5 |
||
| CDS-3UTR GCA 90 bp | AACAATAGCTCAAATACCTACATAGGAGAAGGAAATCTCAAGGGAAAACAGTTATTTGGGCCTACTAATTaGTCCAACACTTCTCGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: NNSSNTYIGEGNLKGKQLFGPTN*SNTSRE Trigger: TTCCCGAGAAGTGTTGGAGCAATTAGTAGGCCCAAA...TAACTGTTTTCCCTTGAGATTTCCTTCTCCTATGTAGGTATTTGAGCTATTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000281471.11 ENST00000537562.5 |
||
| CDS-3UTR GCA 90 bp | TATAGATGGTTTCCTGGGAAAGTAGTTTTGATAAGCTTTCCTAGCATTGATCATTTTGGGCCTACTAATTaGTCCAACACTTCTCGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: YRWFPGKVVLISFPSIDHFGPTN*SNTSRE Trigger: TTCCCGAGAAGTGTTGGAGCAATTAGTAGGCCCAAA...ATGATCAATGCTAGGAAAGCTTATCAAAACTACTTTCCCAGGAAACCATCTATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000281471.11 ENST00000537562.5 ENST00000541931.5 |
||
| CDS-3UTR CCA 90 bp | TATACATATGCACCACCTTTGCAGTGGCAACATATATATCCACACTATAAACATATGAATGGATGTGGCTaGGCAAGAGCCTCTGTAATA | + |
|
Preference number: 4 (lower is better) Translates to: YTYAPPLQWQHIYPHYKHMNGCG*ARASVI Trigger: TATTACAGAGGCTCTTGCCCAGCCACATCCATTCAT...ATGTTTATAGTGTGGATATATATGTTGCCACTGCAAAGGTGGTGCATATGTATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000281471.11 |
||
| CDS-3UTR TCA 90 bp | GAATTAACAGGCTTGATGTTCAGGTCTGCTTTTGGCAAATGGGCATTTAAATACACACAATGTCCCATATaGATCTCCTCTAATTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ELTGLMFRSAFGKWAFKYTQCPI*ISSNFF Trigger: GAAGAAATTAGAGGAGATTCATATGGGACATTGTGT...GTATTTAAATGCCCATTTGCCAAAAGCAGACCTGAACATCAAGCCTGTTAATTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000281471.11 |
||
| CDS-3UTR GCA 90 bp | TATACATATGCACCACCTTTGCAGTGGCAACATATATATCCACACTATAAACATACAGTCCATGTCACTTaGTTTAGTTTGTTTGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: YTYAPPLQWQHIYPHYKHTVHVT*FSLFGP Trigger: AGGCCCAAACAAACTAAAGCAAGTGACATGGACTGT...ATGTTTATAGTGTGGATATATATGTTGCCACTGCAAAGGTGGTGCATATGTATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000281471.11 |
||
| CDS-3UTR GCA 90 bp | AACAATAGCTCAAATACCTACATAGGAGAAGGAAATCTCAAGGGAAAACAGTTAACAGTCCATGTCACTTaGTTTAGTTTGTTTGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: NNSSNTYIGEGNLKGKQLTVHVT*FSLFGP Trigger: AGGCCCAAACAAACTAAAGCAAGTGACATGGACTGT...TAACTGTTTTCCCTTGAGATTTCCTTCTCCTATGTAGGTATTTGAGCTATTGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000281471.11 ENST00000537562.5 |
||
| CDS-3UTR GCA 90 bp | TATAGATGGTTTCCTGGGAAAGTAGTTTTGATAAGCTTTCCTAGCATTGATCATACAGTCCATGTCACTTaGTTTAGTTTGTTTGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: YRWFPGKVVLISFPSIDHTVHVT*FSLFGP Trigger: AGGCCCAAACAAACTAAAGCAAGTGACATGGACTGT...ATGATCAATGCTAGGAAAGCTTATCAAAACTACTTTCCCAGGAAACCATCTATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000281471.11 ENST00000537562.5 ENST00000541931.5 |
||
| CDS-3UTR GCA 90 bp | AACAATAGCTCAAATACCTACATAGGAGAAGGAAATCTCAAGGGAAAACAGTTACTTGATGTTCAGGTCTaGTTTTGGCAAATGGGCATT | + |
|
Preference number: 4 (lower is better) Translates to: NNSSNTYIGEGNLKGKQLLDVQV*FWQMGI Trigger: AATGCCCATTTGCCAAAAGCAGACCTGAACATCAAG...TAACTGTTTTCCCTTGAGATTTCCTTCTCCTATGTAGGTATTTGAGCTATTGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000281471.11 |
||
| CDS-3UTR CCA 90 bp | TATAGATGGTTTCCTGGGAAAGTAGTTTTGATAAGCTTTCCTAGCATTGATCATATGATCTTTAGCAGCTaGCAATTGAGTGCAAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: YRWFPGKVVLISFPSIDHMIFSS*QLSARA Trigger: TGCTCTTGCACTCAATTGCCAGCTGCTAAAGATCAT...ATGATCAATGCTAGGAAAGCTTATCAAAACTACTTTCCCAGGAAACCATCTATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000281471.11 ENST00000537562.5 ENST00000541931.5 |
||
| CDS-3UTR CCA 90 bp | AACAATAGCTCAAATACCTACATAGGAGAAGGAAATCTCAAGGGAAAACAGTTAATGATCTTTAGCAGCTaGCAATTGAGTGCAAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: NNSSNTYIGEGNLKGKQLMIFSS*QLSARA Trigger: TGCTCTTGCACTCAATTGCCAGCTGCTAAAGATCAT...TAACTGTTTTCCCTTGAGATTTCCTTCTCCTATGTAGGTATTTGAGCTATTGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000281471.11 ENST00000537562.5 |
||
| CDS-3UTR CCA 90 bp | GAATTAACAGGCTTGATGTTCAGGTCTGCTTTTGGCAAATGGGCATTTAAATACTCTGCTTTTGGCAAATaGGCATTTAAATACTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: ELTGLMFRSAFGKWAFKYSAFGK*AFKYSK Trigger: CTTGGAGTATTTAAATGCCCATTTGCCAAAAGCAGA...GTATTTAAATGCCCATTTGCCAAAAGCAGACCTGAACATCAAGCCTGTTAATTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000281471.11 |
||
| CDS-3UTR CCA 90 bp | TATAGATGGTTTCCTGGGAAAGTAGTTTTGATAAGCTTTCCTAGCATTGATCATGCTAAATTTGGGGGTTaGTTTAAGCGTGGTATGTGT | + |
|
Preference number: 4 (lower is better) Translates to: YRWFPGKVVLISFPSIDHAKFGG*FKRGMC Trigger: ACACATACCACGCTTAAACCAACCCCCAAATTTAGC...ATGATCAATGCTAGGAAAGCTTATCAAAACTACTTTCCCAGGAAACCATCTATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000281471.11 |
||
| CDS-3UTR TCA 90 bp | TGGTTTCCTGGGAAAGTAGTTTTGATAAGCTTTCCTAGCATTGATCATCTTCAAAGCTTTTATTCCTTCTaGAGTTACAGAAACTCGGTT | + |
|
Preference number: 4 (lower is better) Translates to: WFPGKVVLISFPSIDHLQSFYSF*SYRNSV Trigger: AACCGAGTTTCTGTAACTTCAGAAGGAATAAAAGCT...TTGAAGATGATCAATGCTAGGAAAGCTTATCAAAACTACTTTCCCAGGAAACCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000281471.11 ENST00000537562.5 ENST00000541931.5 |
||
| CDS-3UTR GCA 90 bp | TATAGATGGTTTCCTGGGAAAGTAGTTTTGATAAGCTTTCCTAGCATTGATCATCATATGCACCACCTTTaGAGTGGCAACATATATATC | + |
|
Preference number: 4 (lower is better) Translates to: YRWFPGKVVLISFPSIDHHMHHL*SGNIYI Trigger: GATATATATGTTGCCACTGCAAAGGTGGTGCATATG...ATGATCAATGCTAGGAAAGCTTATCAAAACTACTTTCCCAGGAAACCATCTATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000281471.11 |
||
| CDS-3UTR CCA 90 bp | TGGTTTCCTGGGAAAGTAGTTTTGATAAGCTTTCCTAGCATTGATCATCTTCAAGCAAATCTCTATAGATaGTTTCCTGGGAAAGTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: WFPGKVVLISFPSIDHLQANLYR*FPGKVV Trigger: AACTACTTTCCCAGGAAACCATCTATAGAGATTTGC...TTGAAGATGATCAATGCTAGGAAAGCTTATCAAAACTACTTTCCCAGGAAACCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000281471.11 ENST00000537562.5 ENST00000541931.5 |
||
| CDS-3UTR TCA 90 bp | AACAATAGCTCAAATACCTACATAGGAGAAGGAAATCTCAAGGGAAAACAGTTATGGAAATATTCTTCATaGAGCACCAAAGGCATAGAT | + |
|
Preference number: 4 (lower is better) Translates to: NNSSNTYIGEGNLKGKQLWKYSS*STKGID Trigger: ATCTATGCCTTTGGTGCTTCATGAAGAATATTTCCA...TAACTGTTTTCCCTTGAGATTTCCTTCTCCTATGTAGGTATTTGAGCTATTGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000281471.11 |
||
| CDS-3UTR TCA 90 bp | AACAATAGCTCAAATACCTACATAGGAGAAGGAAATCTCAAGGGAAAACAGTTAAGCTTTTATTCCTTCTaGAGTTACAGAAACTCGGTT | + |
|
Preference number: 4 (lower is better) Translates to: NNSSNTYIGEGNLKGKQLSFYSF*SYRNSV Trigger: AACCGAGTTTCTGTAACTTCAGAAGGAATAAAAGCT...TAACTGTTTTCCCTTGAGATTTCCTTCTCCTATGTAGGTATTTGAGCTATTGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000281471.11 ENST00000537562.5 |
||
| CDS-3UTR TCA 90 bp | TATAGATGGTTTCCTGGGAAAGTAGTTTTGATAAGCTTTCCTAGCATTGATCATAGCTTTTATTCCTTCTaGAGTTACAGAAACTCGGTT | + |
|
Preference number: 4 (lower is better) Translates to: YRWFPGKVVLISFPSIDHSFYSF*SYRNSV Trigger: AACCGAGTTTCTGTAACTTCAGAAGGAATAAAAGCT...ATGATCAATGCTAGGAAAGCTTATCAAAACTACTTTCCCAGGAAACCATCTATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000281471.11 ENST00000537562.5 ENST00000541931.5 |
||
| CDS-3UTR TCA 90 bp | AACAATAGCTCAAATACCTACATAGGAGAAGGAAATCTCAAGGGAAAACAGTTAACACAATGTCCCATATaGATCTCCTCTAATTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: NNSSNTYIGEGNLKGKQLTQCPI*ISSNFF Trigger: GAAGAAATTAGAGGAGATTCATATGGGACATTGTGT...TAACTGTTTTCCCTTGAGATTTCCTTCTCCTATGTAGGTATTTGAGCTATTGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000281471.11 ENST00000537562.5 |
||
| CDS-3UTR TCA 90 bp | TATAGATGGTTTCCTGGGAAAGTAGTTTTGATAAGCTTTCCTAGCATTGATCATACACAATGTCCCATATaGATCTCCTCTAATTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: YRWFPGKVVLISFPSIDHTQCPI*ISSNFF Trigger: GAAGAAATTAGAGGAGATTCATATGGGACATTGTGT...ATGATCAATGCTAGGAAAGCTTATCAAAACTACTTTCCCAGGAAACCATCTATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000281471.11 ENST00000537562.5 ENST00000541931.5 |
||
| CDS-3UTR CCA 90 bp | AACAATAGCTCAAATACCTACATAGGAGAAGGAAATCTCAAGGGAAAACAGTTAATCAAGGGGCATCCATaGAAGAGTAATATACGTATT | + |
|
Preference number: 4 (lower is better) Translates to: NNSSNTYIGEGNLKGKQLIKGHP*KSNIRI Trigger: AATACGTATATTACTCTTCCATGGATGCCCCTTGAT...TAACTGTTTTCCCTTGAGATTTCCTTCTCCTATGTAGGTATTTGAGCTATTGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000281471.11 ENST00000537562.5 |
||
| CDS-3UTR CCA 90 bp | TATAGATGGTTTCCTGGGAAAGTAGTTTTGATAAGCTTTCCTAGCATTGATCATATCAAGGGGCATCCATaGAAGAGTAATATACGTATT | + |
|
Preference number: 4 (lower is better) Translates to: YRWFPGKVVLISFPSIDHIKGHP*KSNIRI Trigger: AATACGTATATTACTCTTCCATGGATGCCCCTTGAT...ATGATCAATGCTAGGAAAGCTTATCAAAACTACTTTCCCAGGAAACCATCTATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000281471.11 ENST00000537562.5 ENST00000541931.5 |
||
| CDS TCA 90 bp | CAGGAGCTGACTGACCCGCCGTGGGCGAGGCATCGCTGCAGCGTCTaGAGCCTCTTCCGCGGTCCCAGGGCCTCCAGAACCCAGCCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: QELTDPPWARHRCSV*SLFRGPRASRTQPG Trigger: CCCTGGCTGGGTTCTGGAGGCCCTGGGACCGCGGAAGAGGCTTCAGACGCTGCAGCGATGCCTCGCCCACGGCGGGTCAGTCAGCTCCTG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000509386.2 ENST00000541931.5 |
||
| CDS TCA 90 bp | AAGCACCAAAGGCATCCGCCGTGGGCGAGGCATCGCTGCAGCGTCTaGAGCCTCTTCCGCGGTCCCAGGGCCTCCAGAACCCAGCCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: KHQRHPPWARHRCSV*SLFRGPRASRTQPG Trigger: CCCTGGCTGGGTTCTGGAGGCCCTGGGACCGCGGAAGAGGCTTCAGACGCTGCAGCGATGCCTCGCCCACGGCGGATGCCTTTGGTGCTT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000535408.5 |
||
| CDS GCA 90 bp | GAAATGCAGAAATCGCCCATCTTCTGCGTCAATCTTGCTGGGAGCTaGAGACTGGAGCTGTTCCCATTTAGCCATCTTGGAAGTGACCTC | + |
|
Preference number: 5 (lower is better) Translates to: EMQKSPIFCVNLAGS*RLELFPFSHLGSDL Trigger: GAGGTCACTTCCAAGATGGCTAAATGGGAACAGCTCCAGTCTGCAGCTCCCAGCAAGATTGACGCAGAAGATGGGCGATTTCTGCATTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000457428.6 ENST00000509386.2 ENST00000536761.5 ENST00000537562.5 ENST00000542781.5 |
||
| CDS-3UTR CAA 90 bp | GCAACCATGACAAAGCTGGGTGGCTATAGAAGAAGGGGGAAACACTTTCCAACTTCTTCTGCGTCAATCTaGCTGGGAGCTGCAGACTGG | + |
|
Preference number: 5 (lower is better) Translates to: ATMTKLGGYRRRGKHFPTSSASI*LGAADW Trigger: CCAGTCTGCAGCTCCCAGCAAGATTGACGCAGAAGA...AGTTGGAAAGTGTTTCCCCCTTCTTCTATAGCCACCCAGCTTTGTCATGGTTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000542781.5 |
||
| CDS GCA 90 bp | AGTCCAGTAGCATCTCAGTTGGAAATGCAGAAATCGCCCATCTTCTaGGTCAATCTTGCTGGGAGCTGCAGACTGGAGCTGTTCCCATTT | + |
|
Preference number: 5 (lower is better) Translates to: SPVASQLEMQKSPIF*VNLAGSCRLELFPF Trigger: AAATGGGAACAGCTCCAGTCTGCAGCTCCCAGCAAGATTGACGCAGAAGATGGGCGATTTCTGCATTTCCAACTGAGATGCTACTGGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000457428.6 ENST00000509386.2 ENST00000536761.5 ENST00000537562.5 ENST00000542781.5 |
||
| CDS CCA 90 bp | AGAAATCGCCCATCTTCTGCGTCAATCTTGCTGGGAGCTGCAGACTaGAGCTGTTCCCATTTAGCCATCTTGGAAGTGACCTCCCAATTT | + |
|
Preference number: 5 (lower is better) Translates to: RNRPSSASILLGAAD*SCSHLAILEVTSQF Trigger: AAATTGGGAGGTCACTTCCAAGATGGCTAAATGGGAACAGCTCCAGTCTGCAGCTCCCAGCAAGATTGACGCAGAAGATGGGCGATTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000457428.6 ENST00000509386.2 ENST00000536761.5 ENST00000537562.5 ENST00000542781.5 |
||
| CDS TCA 90 bp | TGGGTGGCTATAGAAGAAGGGGGAAACACTTTCCAACTCTTTCTGTaGGGCCAGTGTTACCCTGTTATCAAGGGGCATCCATGGAAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: WVAIEEGGNTFQLFL*GQCYPVIKGHPWKS Trigger: ACTCTTCCATGGATGCCCCTTGATAACAGGGTAACACTGGCCTCACAGAAAGAGTTGGAAAGTGTTTCCCCCTTCTTCTATAGCCACCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000542781.5 |
||
| CDS-3UTR CAA 90 bp | GCAACCATGACAAAGCTGGGTGGCTATAGAAGAAGGGGGAAACACTTTCCAACTCCAGTAGCATCTCAGTaGGAAATGCAGAAATCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: ATMTKLGGYRRRGKHFPTPVASQ*EMQKSP Trigger: GGGCGATTTCTGCATTTCCAACTGAGATGCTACTGG...AGTTGGAAAGTGTTTCCCCCTTCTTCTATAGCCACCCAGCTTTGTCATGGTTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000542781.5 |
||
| CDS-3UTR CAA 90 bp | ATGGCAACCATGACAAAGCTGGGTGGCTATAGAAGAAGGGGGAAACACTTTCCACCTTCGTCAGTGAGATaGCAGCATCTTTTCAAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: MATMTKLGGYRRRGKHFPPSSVR*QHLFKE Trigger: TTCTTTGAAAAGATGCTGCAATCTCACTGACGAAGG...TGGAAAGTGTTTCCCCCTTCTTCTATAGCCACCCAGCTTTGTCATGGTTGCCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000542781.5 |
||
| CDS-3UTR CAA 90 bp | AACAATAGCTCAAATACCTACATAGGAGAAGGAAATCTCAAGGGAAAACAGTTATTGCCCAGGCCGGTCTaGAACTCCTGGGCTGAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: NNSSNTYIGEGNLKGKQLLPRPV*NSWAEV Trigger: CACTTCAGCCCAGGAGTTCAAGACCGGCCTGGGCAA...TAACTGTTTTCCCTTGAGATTTCCTTCTCCTATGTAGGTATTTGAGCTATTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000537562.5 |
||
| CDS CCA 90 bp | TCAGTAATACTTAAGCAGCCACCTAAATCGATGATCTTTAGCAGCTaGCAATTGAGTGCAAGAGCAACGACTCCTTCGTCAGTGAGATTG | + |
|
Preference number: 5 (lower is better) Translates to: SVILKQPPKSMIFSS*QLSARATTPSSVRL Trigger: CAATCTCACTGACGAAGGAGTCGTTGCTCTTGCACTCAATTGCCAGCTGCTAAAGATCATCGATTTAGGTGGCTGCTTAAGTATTACTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000281471.11 ENST00000535408.5 ENST00000536761.5 ENST00000537562.5 ENST00000541931.5 ENST00000542781.5 |
||
| CDS-3UTR CAA 90 bp | TATAGATGGTTTCCTGGGAAAGTAGTTTTGATAAGCTTTCCTAGCATTGATCATTCTTCTGCGTCAATCTaGCTGGGAGCTGCAGACTGG | + |
|
Preference number: 5 (lower is better) Translates to: YRWFPGKVVLISFPSIDHSSASI*LGAADW Trigger: CCAGTCTGCAGCTCCCAGCAAGATTGACGCAGAAGA...ATGATCAATGCTAGGAAAGCTTATCAAAACTACTTTCCCAGGAAACCATCTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000537562.5 |
||
| CDS-3UTR CAA 90 bp | GAATTAACAGGCTTGATGTTCAGGTCTGCTTTTGGCAAATGGGCATTTAAATACTTTAGCAGCTGGCAATaGAGTGCAAGAGCAACGACT | + |
|
Preference number: 5 (lower is better) Translates to: ELTGLMFRSAFGKWAFKYFSSWQ*SARATT Trigger: AGTCGTTGCTCTTGCACTCAATTGCCAGCTGCTAAA...GTATTTAAATGCCCATTTGCCAAAAGCAGACCTGAACATCAAGCCTGTTAATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000281471.11 |
||
| CDS-3UTR CAA 90 bp | TATAGATGGTTTCCTGGGAAAGTAGTTTTGATAAGCTTTCCTAGCATTGATCATCCAGTAGCATCTCAGTaGGAAATGCAGAAATCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: YRWFPGKVVLISFPSIDHPVASQ*EMQKSP Trigger: GGGCGATTTCTGCATTTCCAACTGAGATGCTACTGG...ATGATCAATGCTAGGAAAGCTTATCAAAACTACTTTCCCAGGAAACCATCTATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000537562.5 |
||
| CDS-3UTR CAA 90 bp | TATAGATGGTTTCCTGGGAAAGTAGTTTTGATAAGCTTTCCTAGCATTGATCATTTTAGCAGCTGGCAATaGAGTGCAAGAGCAACGACT | + |
|
Preference number: 5 (lower is better) Translates to: YRWFPGKVVLISFPSIDHFSSWQ*SARATT Trigger: AGTCGTTGCTCTTGCACTCAATTGCCAGCTGCTAAA...ATGATCAATGCTAGGAAAGCTTATCAAAACTACTTTCCCAGGAAACCATCTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000281471.11 ENST00000537562.5 ENST00000541931.5 |
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| CDS-3UTR CAA 90 bp | GAATTAACAGGCTTGATGTTCAGGTCTGCTTTTGGCAAATGGGCATTTAAATACCTTGCTTTAGTTTGTTaGGGCCTACTAATTGCTCCA | + |
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Preference number: 5 (lower is better) Translates to: ELTGLMFRSAFGKWAFKYLALVC*GLLIAP Trigger: TGGAGCAATTAGTAGGCCCAAACAAACTAAAGCAAG...GTATTTAAATGCCCATTTGCCAAAAGCAGACCTGAACATCAAGCCTGTTAATTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000281471.11 |
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| CDS-3UTR CAA 90 bp | TGGTTTCCTGGGAAAGTAGTTTTGATAAGCTTTCCTAGCATTGATCATCTTCAACCTTCGTCAGTGAGATaGCAGCATCTTTTCAAAGAA | + |
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Preference number: 5 (lower is better) Translates to: WFPGKVVLISFPSIDHLQPSSVR*QHLFKE Trigger: TTCTTTGAAAAGATGCTGCAATCTCACTGACGAAGG...TTGAAGATGATCAATGCTAGGAAAGCTTATCAAAACTACTTTCCCAGGAAACCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000281471.11 ENST00000537562.5 ENST00000541931.5 |
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| CDS-3UTR CAA 90 bp | TATAGATGGTTTCCTGGGAAAGTAGTTTTGATAAGCTTTCCTAGCATTGATCATCCTTCGTCAGTGAGATaGCAGCATCTTTTCAAAGAA | + |
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Preference number: 5 (lower is better) Translates to: YRWFPGKVVLISFPSIDHPSSVR*QHLFKE Trigger: TTCTTTGAAAAGATGCTGCAATCTCACTGACGAAGG...ATGATCAATGCTAGGAAAGCTTATCAAAACTACTTTCCCAGGAAACCATCTATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000281471.11 ENST00000537562.5 ENST00000541931.5 |
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| CDS-3UTR CAA 90 bp | AACAATAGCTCAAATACCTACATAGGAGAAGGAAATCTCAAGGGAAAACAGTTACTTGCTTTAGTTTGTTaGGGCCTACTAATTGCTCCA | + |
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Preference number: 5 (lower is better) Translates to: NNSSNTYIGEGNLKGKQLLALVC*GLLIAP Trigger: TGGAGCAATTAGTAGGCCCAAACAAACTAAAGCAAG...TAACTGTTTTCCCTTGAGATTTCCTTCTCCTATGTAGGTATTTGAGCTATTGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000281471.11 ENST00000537562.5 |
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| CDS-3UTR CAA 90 bp | TATAGATGGTTTCCTGGGAAAGTAGTTTTGATAAGCTTTCCTAGCATTGATCATCTTGCTTTAGTTTGTTaGGGCCTACTAATTGCTCCA | + |
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Preference number: 5 (lower is better) Translates to: YRWFPGKVVLISFPSIDHLALVC*GLLIAP Trigger: TGGAGCAATTAGTAGGCCCAAACAAACTAAAGCAAG...ATGATCAATGCTAGGAAAGCTTATCAAAACTACTTTCCCAGGAAACCATCTATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000281471.11 ENST00000537562.5 ENST00000541931.5 |
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| CDS-3UTR CAA 90 bp | TATACATATGCACCACCTTTGCAGTGGCAACATATATATCCACACTATAAACATGTCACTTGCTTTAGTTaGTTTGGGCCTACTAATTGC | + |
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Preference number: 5 (lower is better) Translates to: YTYAPPLQWQHIYPHYKHVTCFS*FGPTNC Trigger: GCAATTAGTAGGCCCAAACAAACTAAAGCAAGTGAC...ATGTTTATAGTGTGGATATATATGTTGCCACTGCAAAGGTGGTGCATATGTATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000281471.11 |
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| CDS-3UTR CAA 90 bp | AACAATAGCTCAAATACCTACATAGGAGAAGGAAATCTCAAGGGAAAACAGTTAGTCACTTGCTTTAGTTaGTTTGGGCCTACTAATTGC | + |
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Preference number: 5 (lower is better) Translates to: NNSSNTYIGEGNLKGKQLVTCFS*FGPTNC Trigger: GCAATTAGTAGGCCCAAACAAACTAAAGCAAGTGAC...TAACTGTTTTCCCTTGAGATTTCCTTCTCCTATGTAGGTATTTGAGCTATTGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000281471.11 ENST00000537562.5 |
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| CDS-3UTR CAA 90 bp | TATAGATGGTTTCCTGGGAAAGTAGTTTTGATAAGCTTTCCTAGCATTGATCATGTCACTTGCTTTAGTTaGTTTGGGCCTACTAATTGC | + |
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Preference number: 5 (lower is better) Translates to: YRWFPGKVVLISFPSIDHVTCFS*FGPTNC Trigger: GCAATTAGTAGGCCCAAACAAACTAAAGCAAGTGAC...ATGATCAATGCTAGGAAAGCTTATCAAAACTACTTTCCCAGGAAACCATCTATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000281471.11 ENST00000537562.5 ENST00000541931.5 |
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| CDS-3UTR CAA 90 bp | TGGTTTCCTGGGAAAGTAGTTTTGATAAGCTTTCCTAGCATTGATCATCTTCAAACATATGCACCACCTTaGCAGTGGCAACATATATAT | + |
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Preference number: 5 (lower is better) Translates to: WFPGKVVLISFPSIDHLQTYAPP*QWQHIY Trigger: ATATATATGTTGCCACTGCAAAGGTGGTGCATATGT...TTGAAGATGATCAATGCTAGGAAAGCTTATCAAAACTACTTTCCCAGGAAACCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000281471.11 |
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| CDS-3UTR CAA 90 bp | AACAATAGCTCAAATACCTACATAGGAGAAGGAAATCTCAAGGGAAAACAGTTATGTTCAGGTCTGCTTTaGGCAAATGGGCATTTAAAT | + |
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Preference number: 5 (lower is better) Translates to: NNSSNTYIGEGNLKGKQLCSGLL*ANGHLN Trigger: ATTTAAATGCCCATTTGCCAAAAGCAGACCTGAACA...TAACTGTTTTCCCTTGAGATTTCCTTCTCCTATGTAGGTATTTGAGCTATTGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000281471.11 |
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| CDS TCA 72 bp | ACTGACCCGCCGTGGGCGAGGCATCGCTGCAGCGTCTaGAGCCTCTTCCGCGGTCCCAGGGCCTCCAGAACC | + |
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Preference number: 6 (lower is better) Translates to: TDPPWARHRCSV*SLFRGPRASRT Trigger: GGTTCTGGAGGCCCTGGGACCGCGGAAGAGGCTTCAGACGCTGCAGCGATGCCTCGCCCACGGCGGGTCAGT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000422146.6 ENST00000509386.2 ENST00000541931.5 |
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| CDS TCA 72 bp | AGGCATCCGCCGTGGGCGAGGCATCGCTGCAGCGTCTaGAGCCTCTTCCGCGGTCCCAGGGCCTCCAGAACC | + |
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Preference number: 6 (lower is better) Translates to: RHPPWARHRCSV*SLFRGPRASRT Trigger: GGTTCTGGAGGCCCTGGGACCGCGGAAGAGGCTTCAGACGCTGCAGCGATGCCTCGCCCACGGCGGATGCCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000535408.5 |
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| CDS TCA 72 bp | TTCTTCATGAAGCACCAAAGGCATAGATCCAGGAGCTaGCTGACCCGCCGTGGGCGAGGCATCGCTGCAGCG | + |
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Preference number: 6 (lower is better) Translates to: FFMKHQRHRSRS*LTRRGRGIAAA Trigger: CGCTGCAGCGATGCCTCGCCCACGGCGGGTCAGTCAGCTCCTGGATCTATGCCTTTGGTGCTTCATGAAGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000281471.11 ENST00000422146.6 ENST00000541541.5 |
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| CDS TCA 72 bp | TGGACTTCAGGATGTAAAATAGATCCAGGAGCTGACTaGCCCGCCGTGGGCGAGGCATCGCTGCAGCGTCTG | + |
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Preference number: 6 (lower is better) Translates to: WTSGCKIDPGAD*PAVGEASLQRL Trigger: CAGACGCTGCAGCGATGCCTCGCCCACGGCGGGTCAGTCAGCTCCTGGATCTATTTTACATCCTGAAGTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000541931.5 |
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| CDS TCA 72 bp | AAAATCTTTCCTAAGCATCAAGATCCAGGAGCTGACTaGCCCGCCGTGGGCGAGGCATCGCTGCAGCGTCTG | + |
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Preference number: 6 (lower is better) Translates to: KIFPKHQDPGAD*PAVGEASLQRL Trigger: CAGACGCTGCAGCGATGCCTCGCCCACGGCGGGTCAGTCAGCTCCTGGATCTTGATGCTTAGGAAAGATTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509386.2 |
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| CDS GCA 72 bp | GCATCTCAGTTGGAAATGCAGAAATCGCCCATCTTCTaGGTCAATCTTGCTGGGAGCTGCAGACTGGAGCTG | + |
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Preference number: 6 (lower is better) Translates to: ASQLEMQKSPIF*VNLAGSCRLEL Trigger: CAGCTCCAGTCTGCAGCTCCCAGCAAGATTGACGCAGAAGATGGGCGATTTCTGCATTTCCAACTGAGATGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000457428.6 ENST00000509386.2 ENST00000536761.5 ENST00000537562.5 ENST00000542781.5 |
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| CDS CCA 72 bp | CCATCTTCTGCGTCAATCTTGCTGGGAGCTGCAGACTaGAGCTGTTCCCATTTAGCCATCTTGGAAGTGACC | + |
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Preference number: 6 (lower is better) Translates to: PSSASILLGAAD*SCSHLAILEVT Trigger: GGTCACTTCCAAGATGGCTAAATGGGAACAGCTCCAGTCTGCAGCTCCCAGCAAGATTGACGCAGAAGATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000457428.6 ENST00000509386.2 ENST00000536761.5 ENST00000537562.5 ENST00000542781.5 |
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| CDS GCA 72 bp | AAATCGCCCATCTTCTGCGTCAATCTTGCTGGGAGCTaGAGACTGGAGCTGTTCCCATTTAGCCATCTTGGA | + |
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Preference number: 6 (lower is better) Translates to: KSPIFCVNLAGS*RLELFPFSHLG Trigger: TCCAAGATGGCTAAATGGGAACAGCTCCAGTCTGCAGCTCCCAGCAAGATTGACGCAGAAGATGGGCGATTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000457428.6 ENST00000509386.2 ENST00000536761.5 ENST00000537562.5 ENST00000542781.5 |
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| CDS CAA 72 bp | GTCACCCCCGGCGGCCCAGCTGTAAAATTCCTCTCTTaGTACTCTTTCTCTTTATTTCTCAGACCAGCCGAC | + |
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Preference number: 6 (lower is better) Translates to: VTPGGPAVKFLS*YSFSLFLRPAD Trigger: GTCGGCTGGTCTGAGAAATAAAGAGAAAGAGTACAAAGAGAGGAATTTTACAGCTGGGCCGCCGGGGGTGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000541541.5 |
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| CDS CAA 72 bp | TGGAAATGCAGAAATCGCCCATCTTCTGCGTCAATCTaGCTGGGAGCTGCAGACTGGAGCTGTTCCCATTTA | + |
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Preference number: 6 (lower is better) Translates to: WKCRNRPSSASI*LGAADWSCSHL Trigger: TAAATGGGAACAGCTCCAGTCTGCAGCTCCCAGCAAGATTGACGCAGAAGATGGGCGATTTCTGCATTTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000457428.6 ENST00000509386.2 ENST00000536761.5 ENST00000537562.5 ENST00000542781.5 |
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| CDS CAA 72 bp | CAGCCACCTAAATCGATGATCTTTAGCAGCTGGCAATaGAGTGCAAGAGCAACGACTCCTTCGTCAGTGAGA | + |
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Preference number: 6 (lower is better) Translates to: QPPKSMIFSSWQ*SARATTPSSVR Trigger: TCTCACTGACGAAGGAGTCGTTGCTCTTGCACTCAATTGCCAGCTGCTAAAGATCATCGATTTAGGTGGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000281471.11 ENST00000535408.5 ENST00000536761.5 ENST00000537562.5 ENST00000541931.5 ENST00000542781.5 |
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| CDS TCA 72 bp | ATAGAAGAAGGGGGAAACACTTTCCAACTCTTTCTGTaGGGCCAGTGTTACCCTGTTATCAAGGGGCATCCA | + |
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Preference number: 6 (lower is better) Translates to: IEEGGNTFQLFL*GQCYPVIKGHP Trigger: TGGATGCCCCTTGATAACAGGGTAACACTGGCCTCACAGAAAGAGTTGGAAAGTGTTTCCCCCTTCTTCTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000542781.5 |
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| CDS CAA 90 bp | ATACTTAAGCAGCCACCTAAATCGATGATCTTTAGCAGCTGGCAATaGAGTGCAAGAGCAACGACTCCTTCGTCAGTGAGATTGCAGCAT | + |
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Preference number: 6 (lower is better) Translates to: ILKQPPKSMIFSSWQ*SARATTPSSVRLQH Trigger: ATGCTGCAATCTCACTGACGAAGGAGTCGTTGCTCTTGCACTCAATTGCCAGCTGCTAAAGATCATCGATTTAGGTGGCTGCTTAAGTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000281471.11 ENST00000535408.5 ENST00000536761.5 ENST00000537562.5 ENST00000541931.5 ENST00000542781.5 |
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| CDS CAA 90 bp | AGCTGGCAATTGAGTGCAAGAGCAACGACTCCTTCGTCAGTGAGATaGCAGCATCTTTTCAAAGAAGCTTCGTGTAGGTATGAACAAGAT | + |
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Preference number: 6 (lower is better) Translates to: SWQLSARATTPSSVR*QHLFKEASCRYEQD Trigger: ATCTTGTTCATACCTACACGAAGCTTCTTTGAAAAGATGCTGCAATCTCACTGACGAAGGAGTCGTTGCTCTTGCACTCAATTGCCAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000281471.11 ENST00000535408.5 ENST00000536761.5 ENST00000537562.5 ENST00000541931.5 ENST00000542781.5 |
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| CDS CAA 72 bp | TTGAGTGCAAGAGCAACGACTCCTTCGTCAGTGAGATaGCAGCATCTTTTCAAAGAAGCTTCGTGTAGGTAT | + |
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Preference number: 6 (lower is better) Translates to: LSARATTPSSVR*QHLFKEASCRY Trigger: ATACCTACACGAAGCTTCTTTGAAAAGATGCTGCAATCTCACTGACGAAGGAGTCGTTGCTCTTGCACTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000281471.11 ENST00000535408.5 ENST00000536761.5 ENST00000537562.5 ENST00000541931.5 ENST00000542781.5 |
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| CDS GCA 72 bp | AAATTTAATTTCTTCAGTTTTCTACAGTTAGACAGGTaGAGGAGAGCAGCATCTGATATATCGCAGCTCCGT | + |
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Preference number: 6 (lower is better) Translates to: KFNFFSFLQLDR*RRAASDISQLR Trigger: ACGGAGCTGCGATATATCAGATGCTGCTCTCCTGCACCTGTCTAACTGTAGAAAACTGAAGAAATTAAATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000281471.11 ENST00000506446.6 ENST00000535408.5 ENST00000536761.5 ENST00000537562.5 ENST00000537960.5 ENST00000541931.5 ENST00000542781.5 |
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