RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AMMECR1 (Homo sapiens)

Ensembl gene IDs: ENSG00000101935

Ensembl transcript IDs: ENST00000262844.10, ENST00000372057.1, ENST00000372059.6, ENST00000473662.1, ENST00000496695.1, ENST00000680410.1

Found 271 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AAGGGTGAGGGGAAGCAAGCCTTGCACTTCCTCCATCAATTTCACTaGCCTCTCGTGTTAGGGGAGACTACAGAGGGTAGTAGCACATTC +
Preference number: 1 (lower is better)
Translates to: KGEGKQALHFLHQFH*PLVLGETTEGSSTF
Trigger: GAATGTGCTACTACCCTCTGTAGTCTCCCCTAACACGAGAGGTCAGTGAAATTGATGGAGGAAGTGCAAGGCTTGCTTCCCCTCACCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262844.10
3UTR GCA 90 bp GGCCAGTATACAAACTTCCGGTGTGCTGGGCACTGGGACTGTATGTaGTGGACTGAAAATCTTACAACTGCTTTAAGCTTTAAGGGTGAG +
Preference number: 1 (lower is better)
Translates to: GQYTNFRCAGHWDCM*WTENLTTALSFKGE
Trigger: CTCACCCTTAAAGCTTAAAGCAGTTGTAAGATTTTCAGTCCAGCACATACAGTCCCAGTGCCCAGCACACCGGAAGTTTGTATACTGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262844.10
3UTR CCA 90 bp CAGTATACAAACTTCCGGTGTGCTGGGCACTGGGACTGTATGTGCTaGACTGAAAATCTTACAACTGCTTTAAGCTTTAAGGGTGAGGGG +
Preference number: 1 (lower is better)
Translates to: QYTNFRCAGHWDCMC*TENLTTALSFKGEG
Trigger: CCCCTCACCCTTAAAGCTTAAAGCAGTTGTAAGATTTTCAGTCCAGCACATACAGTCCCAGTGCCCAGCACACCGGAAGTTTGTATACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262844.10
3UTR TCA 90 bp CTTTTCCCCCAAGCCATGTTGGGAAATATTGCTGACCTCGTCCTTTaGAGCCTGCAGGATGGTTATTTCTTCAGTTTAACGTTATTACAC +
Preference number: 1 (lower is better)
Translates to: LFPQAMLGNIADLVL*SLQDGYFFSLTLLH
Trigger: GTGTAATAACGTTAAACTGAAGAAATAACCATCCTGCAGGCTTCAAAGGACGAGGTCAGCAATATTTCCCAACATGGCTTGGGGGAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262844.10
3UTR TCA 90 bp AGATGGAACCTATTCCAGATGACAGTTTCAAATTTCCTGCACATTTaGAGACAAGATAAGAGGCCAGTATACAAACTTCCGGTGTGCTGG +
Preference number: 1 (lower is better)
Translates to: RWNLFQMTVSNFLHI*RQDKRPVYKLPVCW
Trigger: CCAGCACACCGGAAGTTTGTATACTGGCCTCTTATCTTGTCTTCAAATGTGCAGGAAATTTGAAACTGTCATCTGGAATAGGTTCCATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262844.10
3UTR TCA 90 bp CTTAACAAATGCCATTTTTCTACCCGTTACCATGATGATCTTAGTTaGCGATGTCGAAGCTTCACCATGGCAACGGAAACTATCATCATA +
Preference number: 1 (lower is better)
Translates to: LNKCHFSTRYHDDLS*RCRSFTMATETIII
Trigger: TATGATGATAGTTTCCGTTGCCATGGTGAAGCTTCGACATCGTCAACTAAGATCATCATGGTAACGGGTAGAAAAATGGCATTTGTTAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262844.10
ENST00000372057.1
ENST00000372059.6
3UTR CCA 90 bp GTTATCTTTGTATGCATCATGGGAAGACTATACTTGCAGATGAGCTaGGCTCTAACTATAGCATATCTGAATGCCAACTCCATTTTCACA +
Preference number: 1 (lower is better)
Translates to: VIFVCIMGRLYLQMS*ALTIAYLNANSIFT
Trigger: TGTGAAAATGGAGTTGGCATTCAGATATGCTATAGTTAGAGCCCAGCTCATCTGCAAGTATAGTCTTCCCATGATGCATACAAAGATAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262844.10
ENST00000372057.1
ENST00000372059.6
3UTR TCA 90 bp ATAAATGATTTCTCTCTCTCTGTGACAAGCCCTATCACGGACCTTTaGATGCTCACTACTAGAACTAAAGTTCATGTATTTTCACCATGG +
Preference number: 1 (lower is better)
Translates to: INDFSLSVTSPITDL*MLTTRTKVHVFSPW
Trigger: CCATGGTGAAAATACATGAACTTTAGTTCTAGTAGTGAGCATTCAAAGGTCCGTGATAGGGCTTGTCACAGAGAGAGAGAAATCATTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262844.10
ENST00000372057.1
ENST00000372059.6
3UTR GCA 90 bp ACTATACTTGCAGATGAGCTGGGCTCTAACTATAGCATATCTGAATaGCAACTCCATTTTCACAGGTGTGACATAACATCTTATCAATGT +
Preference number: 1 (lower is better)
Translates to: TILADELGSNYSISE*QLHFHRCDITSYQC
Trigger: ACATTGATAAGATGTTATGTCACACCTGTGAAAATGGAGTTGGCATTCAGATATGCTATAGTTAGAGCCCAGCTCATCTGCAAGTATAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262844.10
ENST00000372057.1
ENST00000372059.6
3UTR-3UTR TCA 90 bp TTGCTCAGTGCGTCTATGTACCAGCGCAGTTACTGGGTAGAGCAAAATAAAAGGATTTCTCTCTCTCTGTaGCAAGCCCTATCACGGACC +
Preference number: 2 (lower is better)
Translates to: LLSASMYQRSYWVEQNKRISLSL*QALSRT
Trigger: GGTCCGTGATAGGGCTTGTCACAGAGAGAGAGAAAT...CCTTTTATTTTGCTCTACCCAGTAACTGCGCTGGTACATAGACGCACTGAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262844.10
3UTR-3UTR TCA 90 bp TTGCTCAGTGCGTCTATGTACCAGCGCAGTTACTGGGTAGAGCAAAATAAAAGGCTCCATCAATTTCACTaGCCTCTCGTGTTAGGGGAG +
Preference number: 2 (lower is better)
Translates to: LLSASMYQRSYWVEQNKRLHQFH*PLVLGE
Trigger: CTCCCCTAACACGAGAGGTCAGTGAAATTGATGGAG...CCTTTTATTTTGCTCTACCCAGTAACTGCGCTGGTACATAGACGCACTGAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262844.10
3UTR-3UTR CCA 90 bp TTGCTCAGTGCGTCTATGTACCAGCGCAGTTACTGGGTAGAGCAAAATAAAAGGGCATTTGGGCATGGCTaGGGGCTTCTTTGGTTTGAT +
Preference number: 2 (lower is better)
Translates to: LLSASMYQRSYWVEQNKRAFGHG*GLLWFD
Trigger: ATCAAACCAAAGAAGCCCCCAGCCATGCCCAAATGC...CCTTTTATTTTGCTCTACCCAGTAACTGCGCTGGTACATAGACGCACTGAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262844.10
3UTR-3UTR TCA 90 bp TCGACATCAGTAAGTTATCTTTGTATGCATCATGGGAAGACTATACTTGCAGATTGCAGAGAGGCCCAGTaGCTGGTTGTGCGGCTCAGT +
Preference number: 2 (lower is better)
Translates to: STSVSYLCMHHGKTILADCREAQ*LVVRLS
Trigger: ACTGAGCCGCACAACCAGTCACTGGGCCTCTCTGCA...ATCTGCAAGTATAGTCTTCCCATGATGCATACAAAGATAACTTACTGATGTCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262844.10
ENST00000372057.1
ENST00000372059.6
3UTR-3UTR TCA 90 bp TTGCTCAGTGCGTCTATGTACCAGCGCAGTTACTGGGTAGAGCAAAATAAAAGGGTTGGGAAATATTGCTaGCCTCGTCCTTTGAAGCCT +
Preference number: 2 (lower is better)
Translates to: LLSASMYQRSYWVEQNKRVGKYC*PRPLKP
Trigger: AGGCTTCAAAGGACGAGGTCAGCAATATTTCCCAAC...CCTTTTATTTTGCTCTACCCAGTAACTGCGCTGGTACATAGACGCACTGAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262844.10
3UTR-3UTR CCA 90 bp TTGCTCAGTGCGTCTATGTACCAGCGCAGTTACTGGGTAGAGCAAAATAAAAGGAGGCCACTTGAGGGGTaGGGGACAATTTGTTCTTTT +
Preference number: 2 (lower is better)
Translates to: LLSASMYQRSYWVEQNKRRPLEG*GTICSF
Trigger: AAAAGAACAAATTGTCCCCCACCCCTCAAGTGGCCT...CCTTTTATTTTGCTCTACCCAGTAACTGCGCTGGTACATAGACGCACTGAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000262844.10
3UTR-3UTR TCA 90 bp TTAGTTAAGGCATCACAACTGAAAATGGTTATTTCAACAATGGATGCTGTGGATTGCAGAGAGGCCCAGTaGCTGGTTGTGCGGCTCAGT +
Preference number: 2 (lower is better)
Translates to: LVKASQLKMVISTMDAVDCREAQ*LVVRLS
Trigger: ACTGAGCCGCACAACCAGTCACTGGGCCTCTCTGCA...ATCCACAGCATCCATTGTTGAAATAACCATTTTCAGTTGTGATGCCTTAACTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262844.10
ENST00000372057.1
ENST00000372059.6
3UTR-3UTR TCA 90 bp AGTCAGAGGTGGTTACAAAAGTTTGTTTGCTCAGTGCGTCTATGTACCAGCGCACCTATCACGGACCTTTaGATGCTCACTACTAGAACT +
Preference number: 2 (lower is better)
Translates to: SQRWLQKFVCSVRLCTSAPITDL*MLTTRT
Trigger: AGTTCTAGTAGTGAGCATTCAAAGGTCCGTGATAGG...TGCGCTGGTACATAGACGCACTGAGCAAACAAACTTTTGTAACCACCTCTGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262844.10
3UTR-3UTR CCA 90 bp TTGCTCAGTGCGTCTATGTACCAGCGCAGTTACTGGGTAGAGCAAAATAAAAGGGGCTGGGGGCTTCTTTaGTTTGATCTAACACACATA +
Preference number: 2 (lower is better)
Translates to: LLSASMYQRSYWVEQNKRGWGLL*FDLTHI
Trigger: TATGTGTGTTAGATCAAACCAAAGAAGCCCCCAGCC...CCTTTTATTTTGCTCTACCCAGTAACTGCGCTGGTACATAGACGCACTGAGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000262844.10
3UTR-3UTR TCA 90 bp ATTACAAGTCTCACCATTGTATCACCAAGAACTCATTATGCTGGTGACAGATTCGCTGACCTCGTCCTTTaGAGCCTGCAGGATGGTTAT +
Preference number: 2 (lower is better)
Translates to: ITSLTIVSPRTHYAGDRFADLVL*SLQDGY
Trigger: ATAACCATCCTGCAGGCTTCAAAGGACGAGGTCAGC...GAATCTGTCACCAGCATAATGAGTTCTTGGTGATACAATGGTGAGACTTGTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262844.10
3UTR-3UTR TCA 90 bp TTGCTCAGTGCGTCTATGTACCAGCGCAGTTACTGGGTAGAGCAAAATAAAAGGGGGGCTTCTTTGGTTTaGTCTAACACACATAAGAGA +
Preference number: 2 (lower is better)
Translates to: LLSASMYQRSYWVEQNKRGASLV*SNTHKR
Trigger: TCTCTTATGTGTGTTAGATCAAACCAAAGAAGCCCC...CCTTTTATTTTGCTCTACCCAGTAACTGCGCTGGTACATAGACGCACTGAGCAA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000262844.10
3UTR-3UTR GCA 90 bp AGTCAGAGGTGGTTACAAAAGTTTGTTTGCTCAGTGCGTCTATGTACCAGCGCACTAGAACACAACCTGTaGAATCAGAATCTTCGTCTG +
Preference number: 2 (lower is better)
Translates to: SQRWLQKFVCSVRLCTSALEHNL*NQNLRL
Trigger: CAGACGAAGATTCTGATTGCACAGGTTGTGTTCTAG...TGCGCTGGTACATAGACGCACTGAGCAAACAAACTTTTGTAACCACCTCTGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262844.10
3UTR-3UTR CCA 90 bp TCGACATCAGTAAGTTATCTTTGTATGCATCATGGGAAGACTATACTTGCAGATAGGTGTAGGGTCTCCTaGGAAGAGGTCTGCAGAGAG +
Preference number: 2 (lower is better)
Translates to: STSVSYLCMHHGKTILADRCRVS*EEVCRE
Trigger: CTCTCTGCAGACCTCTTCCCAGGAGACCCTACACCT...ATCTGCAAGTATAGTCTTCCCATGATGCATACAAAGATAACTTACTGATGTCGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262844.10
ENST00000372057.1
ENST00000372059.6
3UTR-3UTR CCA 90 bp ATTACAAGTCTCACCATTGTATCACCAAGAACTCATTATGCTGGTGACAGATTCAGCAGCATTTGGGCATaGCTGGGGGCTTCTTTGGTT +
Preference number: 2 (lower is better)
Translates to: ITSLTIVSPRTHYAGDRFSSIWA*LGASLV
Trigger: AACCAAAGAAGCCCCCAGCCATGCCCAAATGCTGCT...GAATCTGTCACCAGCATAATGAGTTCTTGGTGATACAATGGTGAGACTTGTAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262844.10
3UTR-3UTR TCA 90 bp AGTCAGAGGTGGTTACAAAAGTTTGTTTGCTCAGTGCGTCTATGTACCAGCGCAAAACAGAAACCTGACTaGGACAGCAAAGCAAAATTC +
Preference number: 2 (lower is better)
Translates to: SQRWLQKFVCSVRLCTSAKQKPD*DSKAKF
Trigger: GAATTTTGCTTTGCTGTCTCAGTCAGGTTTCTGTTT...TGCGCTGGTACATAGACGCACTGAGCAAACAAACTTTTGTAACCACCTCTGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262844.10
3UTR-3UTR TCA 90 bp TTGCTCAGTGCGTCTATGTACCAGCGCAGTTACTGGGTAGAGCAAAATAAAAGGCACAATAGGGATAAATaGTTTCTCTCTCTCTGTGAC +
Preference number: 2 (lower is better)
Translates to: LLSASMYQRSYWVEQNKRHNRDK*FLSLCD
Trigger: GTCACAGAGAGAGAGAAATCATTTATCCCTATTGTG...CCTTTTATTTTGCTCTACCCAGTAACTGCGCTGGTACATAGACGCACTGAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262844.10
3UTR-3UTR TCA 90 bp AGTCAGAGGTGGTTACAAAAGTTTGTTTGCTCAGTGCGTCTATGTACCAGCGCAAATGGATGCTGTGGATaGAGGAATACCAACAAACTT +
Preference number: 2 (lower is better)
Translates to: SQRWLQKFVCSVRLCTSANGCCG*RNTNKL
Trigger: AAGTTTGTTGGTATTCCTTCATCCACAGCATCCATT...TGCGCTGGTACATAGACGCACTGAGCAAACAAACTTTTGTAACCACCTCTGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262844.10
3UTR-3UTR TCA 90 bp TTGCTCAGTGCGTCTATGTACCAGCGCAGTTACTGGGTAGAGCAAAATAAAAGGGGTCTAGCATTTGTTTaGAGCACACCATTACAGTTT +
Preference number: 2 (lower is better)
Translates to: LLSASMYQRSYWVEQNKRGLAFV*STPLQF
Trigger: AAACTGTAATGGTGTGCTTCAAACAAATGCTAGACC...CCTTTTATTTTGCTCTACCCAGTAACTGCGCTGGTACATAGACGCACTGAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262844.10
3UTR-3UTR TCA 90 bp AGTCAGAGGTGGTTACAAAAGTTTGTTTGCTCAGTGCGTCTATGTACCAGCGCACTGTATGTGCTGGACTaGAAATCTTACAACTGCTTT +
Preference number: 2 (lower is better)
Translates to: SQRWLQKFVCSVRLCTSALYVLD*KSYNCF
Trigger: AAAGCAGTTGTAAGATTTTCAGTCCAGCACATACAG...TGCGCTGGTACATAGACGCACTGAGCAAACAAACTTTTGTAACCACCTCTGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262844.10
3UTR-3UTR GCA 90 bp AGTCAGAGGTGGTTACAAAAGTTTGTTTGCTCAGTGCGTCTATGTACCAGCGCATTTAAATGGAGGAGGTaGTCACACCCCTCAAATAAA +
Preference number: 2 (lower is better)
Translates to: SQRWLQKFVCSVRLCTSAFKWRR*SHPSNK
Trigger: TTTATTTGAGGGGTGTGAGCACCTCCTCCATTTAAA...TGCGCTGGTACATAGACGCACTGAGCAAACAAACTTTTGTAACCACCTCTGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262844.10
3UTR-3UTR CCA 90 bp TTAGTTAAGGCATCACAACTGAAAATGGTTATTTCAACAATGGATGCTGTGGATAGGTGTAGGGTCTCCTaGGAAGAGGTCTGCAGAGAG +
Preference number: 2 (lower is better)
Translates to: LVKASQLKMVISTMDAVDRCRVS*EEVCRE
Trigger: CTCTCTGCAGACCTCTTCCCAGGAGACCCTACACCT...ATCCACAGCATCCATTGTTGAAATAACCATTTTCAGTTGTGATGCCTTAACTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262844.10
ENST00000372057.1
ENST00000372059.6
3UTR-3UTR CCA 90 bp ATTACAAGTCTCACCATTGTATCACCAAGAACTCATTATGCTGGTGACAGATTCTCCCCCAAGCCATGTTaGGAAATATTGCTGACCTCG +
Preference number: 2 (lower is better)
Translates to: ITSLTIVSPRTHYAGDRFSPKPC*EILLTS
Trigger: CGAGGTCAGCAATATTTCCCAACATGGCTTGGGGGA...GAATCTGTCACCAGCATAATGAGTTCTTGGTGATACAATGGTGAGACTTGTAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262844.10
3UTR-3UTR CCA 90 bp AGTCAGAGGTGGTTACAAAAGTTTGTTTGCTCAGTGCGTCTATGTACCAGCGCATGGGACTGTATGTGCTaGACTGAAAATCTTACAACT +
Preference number: 2 (lower is better)
Translates to: SQRWLQKFVCSVRLCTSAWDCMC*TENLTT
Trigger: AGTTGTAAGATTTTCAGTCCAGCACATACAGTCCCA...TGCGCTGGTACATAGACGCACTGAGCAAACAAACTTTTGTAACCACCTCTGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262844.10
3UTR-3UTR TCA 90 bp TCGACATCAGTAAGTTATCTTTGTATGCATCATGGGAAGACTATACTTGCAGATATTTCTCTCTCTCTGTaGCAAGCCCTATCACGGACC +
Preference number: 2 (lower is better)
Translates to: STSVSYLCMHHGKTILADISLSL*QALSRT
Trigger: GGTCCGTGATAGGGCTTGTCACAGAGAGAGAGAAAT...ATCTGCAAGTATAGTCTTCCCATGATGCATACAAAGATAACTTACTGATGTCGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262844.10
ENST00000372057.1
ENST00000372059.6
3UTR-3UTR TCA 90 bp TTAGTTAAGGCATCACAACTGAAAATGGTTATTTCAACAATGGATGCTGTGGATATTTCTCTCTCTCTGTaGCAAGCCCTATCACGGACC +
Preference number: 2 (lower is better)
Translates to: LVKASQLKMVISTMDAVDISLSL*QALSRT
Trigger: GGTCCGTGATAGGGCTTGTCACAGAGAGAGAGAAAT...ATCCACAGCATCCATTGTTGAAATAACCATTTTCAGTTGTGATGCCTTAACTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262844.10
ENST00000372057.1
ENST00000372059.6
3UTR-3UTR TCA 90 bp TCGACATCAGTAAGTTATCTTTGTATGCATCATGGGAAGACTATACTTGCAGATCATGATGATCTTAGTTaGCGATGTCGAAGCTTCACC +
Preference number: 2 (lower is better)
Translates to: STSVSYLCMHHGKTILADHDDLS*RCRSFT
Trigger: GGTGAAGCTTCGACATCGTCAACTAAGATCATCATG...ATCTGCAAGTATAGTCTTCCCATGATGCATACAAAGATAACTTACTGATGTCGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262844.10
ENST00000372057.1
ENST00000372059.6
3UTR-3UTR TCA 90 bp TCGACATCAGTAAGTTATCTTTGTATGCATCATGGGAAGACTATACTTGCAGATCCTATCACGGACCTTTaGATGCTCACTACTAGAACT +
Preference number: 2 (lower is better)
Translates to: STSVSYLCMHHGKTILADPITDL*MLTTRT
Trigger: AGTTCTAGTAGTGAGCATTCAAAGGTCCGTGATAGG...ATCTGCAAGTATAGTCTTCCCATGATGCATACAAAGATAACTTACTGATGTCGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262844.10
ENST00000372057.1
ENST00000372059.6
3UTR-3UTR TCA 90 bp ATTACAAGTCTCACCATTGTATCACCAAGAACTCATTATGCTGGTGACAGATTCGGTTCTATAAAGTGGTaGGGCAGTCTCTTCTATGAT +
Preference number: 2 (lower is better)
Translates to: ITSLTIVSPRTHYAGDRFGSIKW*GSLFYD
Trigger: ATCATAGAAGAGACTGCCTCACCACTTTATAGAACC...GAATCTGTCACCAGCATAATGAGTTCTTGGTGATACAATGGTGAGACTTGTAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262844.10
3UTR-3UTR GCA 90 bp ATTACAAGTCTCACCATTGTATCACCAAGAACTCATTATGCTGGTGACAGATTCCACTGGGACTGTATGTaGTGGACTGAAAATCTTACA +
Preference number: 2 (lower is better)
Translates to: ITSLTIVSPRTHYAGDRFHWDCM*WTENLT
Trigger: TGTAAGATTTTCAGTCCAGCACATACAGTCCCAGTG...GAATCTGTCACCAGCATAATGAGTTCTTGGTGATACAATGGTGAGACTTGTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262844.10
3UTR-3UTR CCA 90 bp TCGACATCAGTAAGTTATCTTTGTATGCATCATGGGAAGACTATACTTGCAGATGTCGAAGCTTCACCATaGCAACGGAAACTATCATCA +
Preference number: 2 (lower is better)
Translates to: STSVSYLCMHHGKTILADVEASP*QRKLSS
Trigger: TGATGATAGTTTCCGTTGCCATGGTGAAGCTTCGAC...ATCTGCAAGTATAGTCTTCCCATGATGCATACAAAGATAACTTACTGATGTCGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262844.10
ENST00000372057.1
ENST00000372059.6
3UTR-3UTR CCA 90 bp ATTACAAGTCTCACCATTGTATCACCAAGAACTCATTATGCTGGTGACAGATTCTACCAGCGCAGTTACTaGGTAGAGCAAAATAAAAGG +
Preference number: 2 (lower is better)
Translates to: ITSLTIVSPRTHYAGDRFYQRSY*VEQNKR
Trigger: CCTTTTATTTTGCTCTACCCAGTAACTGCGCTGGTA...GAATCTGTCACCAGCATAATGAGTTCTTGGTGATACAATGGTGAGACTTGTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262844.10
3UTR-3UTR TCA 90 bp TTAGTTAAGGCATCACAACTGAAAATGGTTATTTCAACAATGGATGCTGTGGATCATGATGATCTTAGTTaGCGATGTCGAAGCTTCACC +
Preference number: 2 (lower is better)
Translates to: LVKASQLKMVISTMDAVDHDDLS*RCRSFT
Trigger: GGTGAAGCTTCGACATCGTCAACTAAGATCATCATG...ATCCACAGCATCCATTGTTGAAATAACCATTTTCAGTTGTGATGCCTTAACTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262844.10
ENST00000372057.1
ENST00000372059.6
3UTR-3UTR TCA 90 bp TTAGTTAAGGCATCACAACTGAAAATGGTTATTTCAACAATGGATGCTGTGGATCCTATCACGGACCTTTaGATGCTCACTACTAGAACT +
Preference number: 2 (lower is better)
Translates to: LVKASQLKMVISTMDAVDPITDL*MLTTRT
Trigger: AGTTCTAGTAGTGAGCATTCAAAGGTCCGTGATAGG...ATCCACAGCATCCATTGTTGAAATAACCATTTTCAGTTGTGATGCCTTAACTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262844.10
ENST00000372057.1
ENST00000372059.6
3UTR-3UTR TCA 90 bp TCGACATCAGTAAGTTATCTTTGTATGCATCATGGGAAGACTATACTTGCAGATGGTTCTATAAAGTGGTaGGGCAGTCTCTTCTATGAT +
Preference number: 2 (lower is better)
Translates to: STSVSYLCMHHGKTILADGSIKW*GSLFYD
Trigger: ATCATAGAAGAGACTGCCTCACCACTTTATAGAACC...ATCTGCAAGTATAGTCTTCCCATGATGCATACAAAGATAACTTACTGATGTCGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262844.10
ENST00000372057.1
ENST00000372059.6
3UTR-3UTR TCA 90 bp ATTACAAGTCTCACCATTGTATCACCAAGAACTCATTATGCTGGTGACAGATTCAATTTCCTGCACATTTaGAGACAAGATAAGAGGCCA +
Preference number: 2 (lower is better)
Translates to: ITSLTIVSPRTHYAGDRFNFLHI*RQDKRP
Trigger: TGGCCTCTTATCTTGTCTTCAAATGTGCAGGAAATT...GAATCTGTCACCAGCATAATGAGTTCTTGGTGATACAATGGTGAGACTTGTAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262844.10
3UTR-3UTR GCA 90 bp TTAGTTAAGGCATCACAACTGAAAATGGTTATTTCAACAATGGATGCTGTGGATAAAACTAAAGCAATTTaGTTTGCCCCAGTGGCAGGC +
Preference number: 2 (lower is better)
Translates to: LVKASQLKMVISTMDAVDKTKAI*FAPVAG
Trigger: GCCTGCCACTGGGGCAAAGCAAATTGCTTTAGTTTT...ATCCACAGCATCCATTGTTGAAATAACCATTTTCAGTTGTGATGCCTTAACTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262844.10
ENST00000372057.1
ENST00000372059.6
3UTR-3UTR CCA 90 bp TTAGTTAAGGCATCACAACTGAAAATGGTTATTTCAACAATGGATGCTGTGGATGTCGAAGCTTCACCATaGCAACGGAAACTATCATCA +
Preference number: 2 (lower is better)
Translates to: LVKASQLKMVISTMDAVDVEASP*QRKLSS
Trigger: TGATGATAGTTTCCGTTGCCATGGTGAAGCTTCGAC...ATCCACAGCATCCATTGTTGAAATAACCATTTTCAGTTGTGATGCCTTAACTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262844.10
ENST00000372057.1
ENST00000372059.6
3UTR-3UTR CCA 90 bp TTAGTTAAGGCATCACAACTGAAAATGGTTATTTCAACAATGGATGCTGTGGATCTGGGGATATATGTATaGACCTCCTATCGACATCAG +
Preference number: 2 (lower is better)
Translates to: LVKASQLKMVISTMDAVDLGIYV*TSYRHQ
Trigger: CTGATGTCGATAGGAGGTCCATACATATATCCCCAG...ATCCACAGCATCCATTGTTGAAATAACCATTTTCAGTTGTGATGCCTTAACTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262844.10
ENST00000372057.1
ENST00000372059.6
3UTR-3UTR TCA 90 bp TCGACATCAGTAAGTTATCTTTGTATGCATCATGGGAAGACTATACTTGCAGATCACAATAGGGATAAATaGTTTCTCTCTCTCTGTGAC +
Preference number: 2 (lower is better)
Translates to: STSVSYLCMHHGKTILADHNRDK*FLSLCD
Trigger: GTCACAGAGAGAGAGAAATCATTTATCCCTATTGTG...ATCTGCAAGTATAGTCTTCCCATGATGCATACAAAGATAACTTACTGATGTCGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262844.10
ENST00000372057.1
ENST00000372059.6
3UTR-3UTR TCA 90 bp TTAGTTAAGGCATCACAACTGAAAATGGTTATTTCAACAATGGATGCTGTGGATGGTTCTATAAAGTGGTaGGGCAGTCTCTTCTATGAT +
Preference number: 2 (lower is better)
Translates to: LVKASQLKMVISTMDAVDGSIKW*GSLFYD
Trigger: ATCATAGAAGAGACTGCCTCACCACTTTATAGAACC...ATCCACAGCATCCATTGTTGAAATAACCATTTTCAGTTGTGATGCCTTAACTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262844.10
ENST00000372057.1
ENST00000372059.6
3UTR-3UTR TCA 90 bp ATTACAAGTCTCACCATTGTATCACCAAGAACTCATTATGCTGGTGACAGATTCAGGATTTTTGAATTCTaGACTAGCAGTCTGTCACTT +
Preference number: 2 (lower is better)
Translates to: ITSLTIVSPRTHYAGDRFRIFEF*TSSLSL
Trigger: AAGTGACAGACTGCTAGTTCAGAATTCAAAAATCCT...GAATCTGTCACCAGCATAATGAGTTCTTGGTGATACAATGGTGAGACTTGTAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262844.10
3UTR-3UTR TCA 90 bp ATTACAAGTCTCACCATTGTATCACCAAGAACTCATTATGCTGGTGACAGATTCTATATACGACAAAGGTaGAAGGGTCTAGCATTTGTT +
Preference number: 2 (lower is better)
Translates to: ITSLTIVSPRTHYAGDRFYIRQR*KGLAFV
Trigger: AACAAATGCTAGACCCTTTCACCTTTGTCGTATATA...GAATCTGTCACCAGCATAATGAGTTCTTGGTGATACAATGGTGAGACTTGTAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262844.10
3UTR-3UTR GCA 90 bp ATTACAAGTCTCACCATTGTATCACCAAGAACTCATTATGCTGGTGACAGATTCCAGGATCTTAACAAATaGCATTTTTCTACCCGTTAC +
Preference number: 2 (lower is better)
Translates to: ITSLTIVSPRTHYAGDRFQDLNK*HFSTRY
Trigger: GTAACGGGTAGAAAAATGGCATTTGTTAAGATCCTG...GAATCTGTCACCAGCATAATGAGTTCTTGGTGATACAATGGTGAGACTTGTAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262844.10
3UTR-3UTR GCA 90 bp TCGACATCAGTAAGTTATCTTTGTATGCATCATGGGAAGACTATACTTGCAGATTCACGGACCTTTGAATaGTCACTACTAGAACTAAAG +
Preference number: 2 (lower is better)
Translates to: STSVSYLCMHHGKTILADSRTFE*SLLELK
Trigger: CTTTAGTTCTAGTAGTGAGCATTCAAAGGTCCGTGA...ATCTGCAAGTATAGTCTTCCCATGATGCATACAAAGATAACTTACTGATGTCGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262844.10
ENST00000372057.1
ENST00000372059.6
3UTR-3UTR GCA 90 bp ATTACAAGTCTCACCATTGTATCACCAAGAACTCATTATGCTGGTGACAGATTCTATAGCATATCTGAATaGCAACTCCATTTTCACAGG +
Preference number: 2 (lower is better)
Translates to: ITSLTIVSPRTHYAGDRFYSISE*QLHFHR
Trigger: CCTGTGAAAATGGAGTTGGCATTCAGATATGCTATA...GAATCTGTCACCAGCATAATGAGTTCTTGGTGATACAATGGTGAGACTTGTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262844.10
3UTR-3UTR GCA 90 bp ATTACAAGTCTCACCATTGTATCACCAAGAACTCATTATGCTGGTGACAGATTCGAAATGGAAGCCTTTTaGTACATACCAAAGCAAAGT +
Preference number: 2 (lower is better)
Translates to: ITSLTIVSPRTHYAGDRFEMEAF*YIPKQS
Trigger: ACTTTGCTTTGGTATGTAGCAAAAGGCTTCCATTTC...GAATCTGTCACCAGCATAATGAGTTCTTGGTGATACAATGGTGAGACTTGTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262844.10
3UTR-3UTR TCA 90 bp TTAGTTAAGGCATCACAACTGAAAATGGTTATTTCAACAATGGATGCTGTGGATCACAATAGGGATAAATaGTTTCTCTCTCTCTGTGAC +
Preference number: 2 (lower is better)
Translates to: LVKASQLKMVISTMDAVDHNRDK*FLSLCD
Trigger: GTCACAGAGAGAGAGAAATCATTTATCCCTATTGTG...ATCCACAGCATCCATTGTTGAAATAACCATTTTCAGTTGTGATGCCTTAACTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262844.10
ENST00000372057.1
ENST00000372059.6
3UTR-3UTR TCA 90 bp TCGACATCAGTAAGTTATCTTTGTATGCATCATGGGAAGACTATACTTGCAGATCCATTTTCACAGGTGTaGCATAACATCTTATCAATG +
Preference number: 2 (lower is better)
Translates to: STSVSYLCMHHGKTILADPFSQV*HNILSM
Trigger: CATTGATAAGATGTTATGTCACACCTGTGAAAATGG...ATCTGCAAGTATAGTCTTCCCATGATGCATACAAAGATAACTTACTGATGTCGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262844.10
ENST00000372057.1
ENST00000372059.6
3UTR-3UTR GCA 90 bp TCGACATCAGTAAGTTATCTTTGTATGCATCATGGGAAGACTATACTTGCAGATCAGGATCTTAACAAATaGCATTTTTCTACCCGTTAC +
Preference number: 2 (lower is better)
Translates to: STSVSYLCMHHGKTILADQDLNK*HFSTRY
Trigger: GTAACGGGTAGAAAAATGGCATTTGTTAAGATCCTG...ATCTGCAAGTATAGTCTTCCCATGATGCATACAAAGATAACTTACTGATGTCGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262844.10
ENST00000372057.1
ENST00000372059.6
3UTR-3UTR GCA 90 bp TCGACATCAGTAAGTTATCTTTGTATGCATCATGGGAAGACTATACTTGCAGATAAAATCCCTAAAAACTaGACACTTTCTTCCATCCAC +
Preference number: 2 (lower is better)
Translates to: STSVSYLCMHHGKTILADKIPKN*TLSSIH
Trigger: GTGGATGGAAGAAAGTGTGCAGTTTTTAGGGATTTT...ATCTGCAAGTATAGTCTTCCCATGATGCATACAAAGATAACTTACTGATGTCGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262844.10
ENST00000372057.1
ENST00000372059.6
3UTR-3UTR GCA 90 bp TTAGTTAAGGCATCACAACTGAAAATGGTTATTTCAACAATGGATGCTGTGGATTCACGGACCTTTGAATaGTCACTACTAGAACTAAAG +
Preference number: 2 (lower is better)
Translates to: LVKASQLKMVISTMDAVDSRTFE*SLLELK
Trigger: CTTTAGTTCTAGTAGTGAGCATTCAAAGGTCCGTGA...ATCCACAGCATCCATTGTTGAAATAACCATTTTCAGTTGTGATGCCTTAACTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262844.10
ENST00000372057.1
ENST00000372059.6
3UTR-3UTR GCA 90 bp TCGACATCAGTAAGTTATCTTTGTATGCATCATGGGAAGACTATACTTGCAGATTATAGCATATCTGAATaGCAACTCCATTTTCACAGG +
Preference number: 2 (lower is better)
Translates to: STSVSYLCMHHGKTILADYSISE*QLHFHR
Trigger: CCTGTGAAAATGGAGTTGGCATTCAGATATGCTATA...ATCTGCAAGTATAGTCTTCCCATGATGCATACAAAGATAACTTACTGATGTCGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262844.10
ENST00000372057.1
ENST00000372059.6
3UTR-3UTR CCA 90 bp TTAGTTAAGGCATCACAACTGAAAATGGTTATTTCAACAATGGATGCTGTGGATTACTTGCAGATGAGCTaGGCTCTAACTATAGCATAT +
Preference number: 2 (lower is better)
Translates to: LVKASQLKMVISTMDAVDYLQMS*ALTIAY
Trigger: ATATGCTATAGTTAGAGCCCAGCTCATCTGCAAGTA...ATCCACAGCATCCATTGTTGAAATAACCATTTTCAGTTGTGATGCCTTAACTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262844.10
ENST00000372057.1
ENST00000372059.6
3UTR-3UTR TCA 90 bp TTAGTTAAGGCATCACAACTGAAAATGGTTATTTCAACAATGGATGCTGTGGATCCATTTTCACAGGTGTaGCATAACATCTTATCAATG +
Preference number: 2 (lower is better)
Translates to: LVKASQLKMVISTMDAVDPFSQV*HNILSM
Trigger: CATTGATAAGATGTTATGTCACACCTGTGAAAATGG...ATCCACAGCATCCATTGTTGAAATAACCATTTTCAGTTGTGATGCCTTAACTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262844.10
ENST00000372057.1
ENST00000372059.6
3UTR-3UTR GCA 90 bp TTAGTTAAGGCATCACAACTGAAAATGGTTATTTCAACAATGGATGCTGTGGATCAGGATCTTAACAAATaGCATTTTTCTACCCGTTAC +
Preference number: 2 (lower is better)
Translates to: LVKASQLKMVISTMDAVDQDLNK*HFSTRY
Trigger: GTAACGGGTAGAAAAATGGCATTTGTTAAGATCCTG...ATCCACAGCATCCATTGTTGAAATAACCATTTTCAGTTGTGATGCCTTAACTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262844.10
ENST00000372057.1
ENST00000372059.6
3UTR-3UTR GCA 90 bp TTAGTTAAGGCATCACAACTGAAAATGGTTATTTCAACAATGGATGCTGTGGATAAAATCCCTAAAAACTaGACACTTTCTTCCATCCAC +
Preference number: 2 (lower is better)
Translates to: LVKASQLKMVISTMDAVDKIPKN*TLSSIH
Trigger: GTGGATGGAAGAAAGTGTGCAGTTTTTAGGGATTTT...ATCCACAGCATCCATTGTTGAAATAACCATTTTCAGTTGTGATGCCTTAACTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262844.10
ENST00000372057.1
ENST00000372059.6
3UTR-3UTR CCA 90 bp TTAGTTAAGGCATCACAACTGAAAATGGTTATTTCAACAATGGATGCTGTGGATTCTTTGTATGCATCATaGGAAGACTATACTTGCAGA +
Preference number: 2 (lower is better)
Translates to: LVKASQLKMVISTMDAVDSLYAS*EDYTCR
Trigger: TCTGCAAGTATAGTCTTCCCATGATGCATACAAAGA...ATCCACAGCATCCATTGTTGAAATAACCATTTTCAGTTGTGATGCCTTAACTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262844.10
ENST00000372057.1
ENST00000372059.6
3UTR-3UTR CCA 90 bp TTAGTTAAGGCATCACAACTGAAAATGGTTATTTCAACAATGGATGCTGTGGATATCTGTCATTTTTCCTaGGGATATATGTATGGACCT +
Preference number: 2 (lower is better)
Translates to: LVKASQLKMVISTMDAVDICHFS*GYMYGP
Trigger: AGGTCCATACATATATCCCCAGGAAAAATGACAGAT...ATCCACAGCATCCATTGTTGAAATAACCATTTTCAGTTGTGATGCCTTAACTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262844.10
ENST00000372057.1
ENST00000372059.6
3UTR-3UTR CAA 90 bp TTGCTCAGTGCGTCTATGTACCAGCGCAGTTACTGGGTAGAGCAAAATAAAAGGCTAAAGCAATTTGCTTaGCCCCAGTGGCAGGCAGAA +
Preference number: 3 (lower is better)
Translates to: LLSASMYQRSYWVEQNKRLKQFA*PQWQAE
Trigger: TTCTGCCTGCCACTGGGGCAAAGCAAATTGCTTTAG...CCTTTTATTTTGCTCTACCCAGTAACTGCGCTGGTACATAGACGCACTGAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262844.10
3UTR-3UTR CAA 90 bp AGTCAGAGGTGGTTACAAAAGTTTGTTTGCTCAGTGCGTCTATGTACCAGCGCATTCCCCCAAGCCATGTaGGGAAATATTGCTGACCTC +
Preference number: 3 (lower is better)
Translates to: SQRWLQKFVCSVRLCTSAFPQAM*GNIADL
Trigger: GAGGTCAGCAATATTTCCCAACATGGCTTGGGGGAA...TGCGCTGGTACATAGACGCACTGAGCAAACAAACTTTTGTAACCACCTCTGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262844.10
3UTR TCA 72 bp AGCAGCATTTGGGCATGGCTGGGGGCTTCTTTGGTTTaGTCTAACACACATAAGAGATGGAACCTATTCCAG +
Preference number: 3 (lower is better)
Translates to: SSIWAWLGASLV*SNTHKRWNLFQ
Trigger: CTGGAATAGGTTCCATCTCTTATGTGTGTTAGATCAAACCAAAGAAGCCCCCAGCCATGCCCAAATGCTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262844.10
3UTR GCA 72 bp GTAGTCAGAGGTGGTTACAAAAGTTTGTTTGCTCAGTaGGTCTATGTACCAGCGCAGTTACTGGGTAGAGCA +
Preference number: 3 (lower is better)
Translates to: VVRGGYKSLFAQ*VYVPAQLLGRA
Trigger: TGCTCTACCCAGTAACTGCGCTGGTACATAGACGCACTGAGCAAACAAACTTTTGTAACCACCTCTGACTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262844.10
3UTR-3UTR CAA 90 bp ATTACAAGTCTCACCATTGTATCACCAAGAACTCATTATGCTGGTGACAGATTCCAGTCAGAAGGCCACTaGAGGGGTGGGGGACAATTT +
Preference number: 3 (lower is better)
Translates to: ITSLTIVSPRTHYAGDRFQSEGH*RGGGQF
Trigger: AAATTGTCCCCCACCCCTCAAGTGGCCTTCTGACTG...GAATCTGTCACCAGCATAATGAGTTCTTGGTGATACAATGGTGAGACTTGTAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262844.10
3UTR-3UTR CAA 90 bp ATTACAAGTCTCACCATTGTATCACCAAGAACTCATTATGCTGGTGACAGATTCCTTTTGAAGCAGCATTaGGGCATGGCTGGGGGCTTC +
Preference number: 3 (lower is better)
Translates to: ITSLTIVSPRTHYAGDRFLLKQH*GMAGGF
Trigger: GAAGCCCCCAGCCATGCCCAAATGCTGCTTCAAAAG...GAATCTGTCACCAGCATAATGAGTTCTTGGTGATACAATGGTGAGACTTGTAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262844.10
3UTR TCA 72 bp TATCCTTTTCCCCCAAGCCATGTTGGGAAATATTGCTaGCCTCGTCCTTTGAAGCCTGCAGGATGGTTATTT +
Preference number: 3 (lower is better)
Translates to: YPFPPSHVGKYC*PRPLKPAGWLF
Trigger: AAATAACCATCCTGCAGGCTTCAAAGGACGAGGTCAGCAATATTTCCCAACATGGCTTGGGGGAAAAGGATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262844.10
3UTR-3UTR CAA 90 bp TTGCTCAGTGCGTCTATGTACCAGCGCAGTTACTGGGTAGAGCAAAATAAAAGGGGGTCTAGCATTTGTTaGAAGCACACCATTACAGTT +
Preference number: 3 (lower is better)
Translates to: LLSASMYQRSYWVEQNKRGSSIC*KHTITV
Trigger: AACTGTAATGGTGTGCTTCAAACAAATGCTAGACCC...CCTTTTATTTTGCTCTACCCAGTAACTGCGCTGGTACATAGACGCACTGAGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262844.10
3UTR TCA 72 bp TGCCATTTTTCTACCCGTTACCATGATGATCTTAGTTaGCGATGTCGAAGCTTCACCATGGCAACGGAAACT +
Preference number: 3 (lower is better)
Translates to: CHFSTRYHDDLS*RCRSFTMATET
Trigger: AGTTTCCGTTGCCATGGTGAAGCTTCGACATCGTCAACTAAGATCATCATGGTAACGGGTAGAAAAATGGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262844.10
ENST00000372057.1
ENST00000372059.6
3UTR TCA 72 bp CAAGCCATGTTGGGAAATATTGCTGACCTCGTCCTTTaGAGCCTGCAGGATGGTTATTTCTTCAGTTTAACG +
Preference number: 3 (lower is better)
Translates to: QAMLGNIADLVL*SLQDGYFFSLT
Trigger: CGTTAAACTGAAGAAATAACCATCCTGCAGGCTTCAAAGGACGAGGTCAGCAATATTTCCCAACATGGCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262844.10
3UTR GCA 72 bp TACAAAAGTAGTCAGAGGTGGTTACAAAAGTTTGTTTaGTCAGTGCGTCTATGTACCAGCGCAGTTACTGGG +
Preference number: 3 (lower is better)
Translates to: YKSSQRWLQKFV*SVRLCTSAVTG
Trigger: CCCAGTAACTGCGCTGGTACATAGACGCACTGAGCAAACAAACTTTTGTAACCACCTCTGACTACTTTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262844.10
3UTR CCA 72 bp TTTGAAGCAGCATTTGGGCATGGCTGGGGGCTTCTTTaGTTTGATCTAACACACATAAGAGATGGAACCTAT +
Preference number: 3 (lower is better)
Translates to: FEAAFGHGWGLL*FDLTHIRDGTY
Trigger: ATAGGTTCCATCTCTTATGTGTGTTAGATCAAACCAAAGAAGCCCCCAGCCATGCCCAAATGCTGCTTCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262844.10
3UTR-3UTR CAA 90 bp AGTCAGAGGTGGTTACAAAAGTTTGTTTGCTCAGTGCGTCTATGTACCAGCGCAAACTGGCTACCAAGATaGCATTTCAGGCTAACAATT +
Preference number: 3 (lower is better)
Translates to: SQRWLQKFVCSVRLCTSANWLPR*HFRLTI
Trigger: AATTGTTAGCCTGAAATGCAATCTTGGTAGCCAGTT...TGCGCTGGTACATAGACGCACTGAGCAAACAAACTTTTGTAACCACCTCTGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262844.10
3UTR-3UTR CAA 90 bp TTGCTCAGTGCGTCTATGTACCAGCGCAGTTACTGGGTAGAGCAAAATAAAAGGGCACACCATTACAGTTaGTATAACACCCTTTACACT +
Preference number: 3 (lower is better)
Translates to: LLSASMYQRSYWVEQNKRAHHYS*YNTLYT
Trigger: AGTGTAAAGGGTGTTATACAAACTGTAATGGTGTGC...CCTTTTATTTTGCTCTACCCAGTAACTGCGCTGGTACATAGACGCACTGAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262844.10
3UTR-3UTR CAA 90 bp AGTCAGAGGTGGTTACAAAAGTTTGTTTGCTCAGTGCGTCTATGTACCAGCGCAAGAAATGGAAGCCTTTaGCTACATACCAAAGCAAAG +
Preference number: 3 (lower is better)
Translates to: SQRWLQKFVCSVRLCTSARNGSL*LHTKAK
Trigger: CTTTGCTTTGGTATGTAGCAAAAGGCTTCCATTTCT...TGCGCTGGTACATAGACGCACTGAGCAAACAAACTTTTGTAACCACCTCTGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262844.10
3UTR GCA 72 bp GCAGATGAGCTGGGCTCTAACTATAGCATATCTGAATaGCAACTCCATTTTCACAGGTGTGACATAACATCT +
Preference number: 3 (lower is better)
Translates to: ADELGSNYSISE*QLHFHRCDITS
Trigger: AGATGTTATGTCACACCTGTGAAAATGGAGTTGGCATTCAGATATGCTATAGTTAGAGCCCAGCTCATCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262844.10
ENST00000372057.1
ENST00000372059.6
3UTR-3UTR CAA 90 bp ATTACAAGTCTCACCATTGTATCACCAAGAACTCATTATGCTGGTGACAGATTCATGGGAAGACTATACTaGCAGATGAGCTGGGCTCTA +
Preference number: 3 (lower is better)
Translates to: ITSLTIVSPRTHYAGDRFMGRLY*QMSWAL
Trigger: TAGAGCCCAGCTCATCTGCAAGTATAGTCTTCCCAT...GAATCTGTCACCAGCATAATGAGTTCTTGGTGATACAATGGTGAGACTTGTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262844.10
3UTR TCA 72 bp AGTCTCTTCTATGATAACCAGCACAATAGGGATAAATaGTTTCTCTCTCTCTGTGACAAGCCCTATCACGGA +
Preference number: 3 (lower is better)
Translates to: SLFYDNQHNRDK*FLSLCDKPYHG
Trigger: TCCGTGATAGGGCTTGTCACAGAGAGAGAGAAATCATTTATCCCTATTGTGCTGGTTATCATAGAAGAGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262844.10
ENST00000372057.1
ENST00000372059.6
3UTR-3UTR CAA 90 bp ATTACAAGTCTCACCATTGTATCACCAAGAACTCATTATGCTGGTGACAGATTCGGTGGTTACAAAAGTTaGTTTGCTCAGTGCGTCTAT +
Preference number: 3 (lower is better)
Translates to: ITSLTIVSPRTHYAGDRFGGYKS*FAQCVY
Trigger: ATAGACGCACTGAGCAAACAAACTTTTGTAACCACC...GAATCTGTCACCAGCATAATGAGTTCTTGGTGATACAATGGTGAGACTTGTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262844.10
3UTR TCA 72 bp TTCTCTCTCTCTGTGACAAGCCCTATCACGGACCTTTaGATGCTCACTACTAGAACTAAAGTTCATGTATTT +
Preference number: 3 (lower is better)
Translates to: FSLSVTSPITDL*MLTTRTKVHVF
Trigger: AAATACATGAACTTTAGTTCTAGTAGTGAGCATTCAAAGGTCCGTGATAGGGCTTGTCACAGAGAGAGAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262844.10
ENST00000372057.1
ENST00000372059.6
3UTR-3UTR CAA 90 bp ATTACAAGTCTCACCATTGTATCACCAAGAACTCATTATGCTGGTGACAGATTCGTTACAAAAGTTTGTTaGCTCAGTGCGTCTATGTAC +
Preference number: 3 (lower is better)
Translates to: ITSLTIVSPRTHYAGDRFVTKVC*LSASMY
Trigger: GTACATAGACGCACTGAGCAAACAAACTTTTGTAAC...GAATCTGTCACCAGCATAATGAGTTCTTGGTGATACAATGGTGAGACTTGTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262844.10
3UTR GCA 72 bp AAACTAAAGACGAACCTAAGTAAAATCCCTAAAAACTaGACACTTTCTTCCATCCACAGTCAAAGGAAGGGA +
Preference number: 3 (lower is better)
Translates to: KLKTNLSKIPKN*TLSSIHSQRKG
Trigger: TCCCTTCCTTTGACTGTGGATGGAAGAAAGTGTGCAGTTTTTAGGGATTTTACTTAGGTTCGTCTTTAGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262844.10
ENST00000372057.1
ENST00000372059.6
3UTR-3UTR CAA 90 bp TTAGTTAAGGCATCACAACTGAAAATGGTTATTTCAACAATGGATGCTGTGGATATCAGTAAGTTATCTTaGTATGCATCATGGGAAGAC +
Preference number: 3 (lower is better)
Translates to: LVKASQLKMVISTMDAVDISKLS*YASWED
Trigger: GTCTTCCCATGATGCATACAAAGATAACTTACTGAT...ATCCACAGCATCCATTGTTGAAATAACCATTTTCAGTTGTGATGCCTTAACTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262844.10
ENST00000372057.1
ENST00000372059.6
CDS-3UTR CCA 90 bp TTGCTCAGTGCGTCTATGTACCAGCGCAGTTACTGGGTAGAGCAAAATAAAAGGCTCTCTCCGCTGCAGTaGGAGGAGGAGGAGGCGCCA +
Preference number: 4 (lower is better)
Translates to: LLSASMYQRSYWVEQNKRLSPLQ*EEEEAP
Trigger: TGGCGCCTCCTCCTCCTCCCACTGCAGCGGAGAGAG...CCTTTTATTTTGCTCTACCCAGTAACTGCGCTGGTACATAGACGCACTGAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262844.10
CDS-3UTR TCA 90 bp TCGACATCAGTAAGTTATCTTTGTATGCATCATGGGAAGACTATACTTGCAGATGACCTCCCAGCCCGTTaGGCCGCGTACCGGCGCCTC +
Preference number: 4 (lower is better)
Translates to: STSVSYLCMHHGKTILADDLPAR*AAYRRL
Trigger: GAGGCGCCGGTACGCGGCTCAACGGGCTGGGAGGTC...ATCTGCAAGTATAGTCTTCCCATGATGCATACAAAGATAACTTACTGATGTCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262844.10
ENST00000372059.6
CDS-3UTR TCA 90 bp TTGCTCAGTGCGTCTATGTACCAGCGCAGTTACTGGGTAGAGCAAAATAAAAGGTGCAGAGAGGCCCAGTaGCTGGTTGTGCGGCTCAGT +
Preference number: 4 (lower is better)
Translates to: LLSASMYQRSYWVEQNKRCREAQ*LVVRLS
Trigger: ACTGAGCCGCACAACCAGTCACTGGGCCTCTCTGCA...CCTTTTATTTTGCTCTACCCAGTAACTGCGCTGGTACATAGACGCACTGAGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262844.10
CDS-3UTR TCA 90 bp TTAGTTAAGGCATCACAACTGAAAATGGTTATTTCAACAATGGATGCTGTGGATGACCTCCCAGCCCGTTaGGCCGCGTACCGGCGCCTC +
Preference number: 4 (lower is better)
Translates to: LVKASQLKMVISTMDAVDDLPAR*AAYRRL
Trigger: GAGGCGCCGGTACGCGGCTCAACGGGCTGGGAGGTC...ATCCACAGCATCCATTGTTGAAATAACCATTTTCAGTTGTGATGCCTTAACTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262844.10
ENST00000372059.6
CDS-3UTR TCA 90 bp AGTCAGAGGTGGTTACAAAAGTTTGTTTGCTCAGTGCGTCTATGTACCAGCGCAGCAGCACATCTCTGCTaGCACCACCATCTTCCGGGA +
Preference number: 4 (lower is better)
Translates to: SQRWLQKFVCSVRLCTSAAAHLC*HHHLPG
Trigger: TCCCGGAAGATGGTGGTGTCAGCAGAGATGTGCTGC...TGCGCTGGTACATAGACGCACTGAGCAAACAAACTTTTGTAACCACCTCTGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262844.10
CDS-3UTR TCA 90 bp TCGACATCAGTAAGTTATCTTTGTATGCATCATGGGAAGACTATACTTGCAGATCCGTGCCCCTTACCGTaGGGGTGCTGGCAGCCACAC +
Preference number: 4 (lower is better)
Translates to: STSVSYLCMHHGKTILADPCPLP*GCWQPH
Trigger: GTGTGGCTGCCAGCACCCTCACGGTAAGGGGCACGG...ATCTGCAAGTATAGTCTTCCCATGATGCATACAAAGATAACTTACTGATGTCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372057.1
CDS-3UTR CCA 90 bp TTGCTCAGTGCGTCTATGTACCAGCGCAGTTACTGGGTAGAGCAAAATAAAAGGCCTCCGGTAGGTAGGTaGCGGTGCGTTTTGATCCTT +
Preference number: 4 (lower is better)
Translates to: LLSASMYQRSYWVEQNKRPPVGR*RCVLIL
Trigger: AAGGATCAAAACGCACCGCCACCTACCTACCGGAGG...CCTTTTATTTTGCTCTACCCAGTAACTGCGCTGGTACATAGACGCACTGAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262844.10
CDS-3UTR CCA 90 bp TCGACATCAGTAAGTTATCTTTGTATGCATCATGGGAAGACTATACTTGCAGATTCCCCAGCTCGGCACTaGCTCTCTCCGCTGCAGTGG +
Preference number: 4 (lower is better)
Translates to: STSVSYLCMHHGKTILADSPARH*LSPLQW
Trigger: CCACTGCAGCGGAGAGAGCCAGTGCCGAGCTGGGGA...ATCTGCAAGTATAGTCTTCCCATGATGCATACAAAGATAACTTACTGATGTCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262844.10
ENST00000372059.6
CDS-3UTR CCA 90 bp AGTCAGAGGTGGTTACAAAAGTTTGTTTGCTCAGTGCGTCTATGTACCAGCGCAAGCAGCATTTGGGCATaGCTGGGGGCTTCTTTGGTT +
Preference number: 4 (lower is better)
Translates to: SQRWLQKFVCSVRLCTSASSIWA*LGASLV
Trigger: AACCAAAGAAGCCCCCAGCCATGCCCAAATGCTGCT...TGCGCTGGTACATAGACGCACTGAGCAAACAAACTTTTGTAACCACCTCTGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262844.10
CDS-3UTR TCA 90 bp TCGACATCAGTAAGTTATCTTTGTATGCATCATGGGAAGACTATACTTGCAGATGCCACACTGCTTCTTTaGGCCTGTGGCCCGGCAAGG +
Preference number: 4 (lower is better)
Translates to: STSVSYLCMHHGKTILADATLLL*ACGPAR
Trigger: CCTTGCCGGGCCACAGGCTCAAAGAAGCAGTGTGGC...ATCTGCAAGTATAGTCTTCCCATGATGCATACAAAGATAACTTACTGATGTCGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372057.1
CDS-3UTR GCA 90 bp TTGCTCAGTGCGTCTATGTACCAGCGCAGTTACTGGGTAGAGCAAAATAAAAGGGAACTGGACAGTTTCTaGTTCTTCACCCCGCAGCAA +
Preference number: 4 (lower is better)
Translates to: LLSASMYQRSYWVEQNKRELDSF*FFTPQQ
Trigger: TTGCTGCGGGGTGAAGAAGCAGAAACTGTCCAGTTC...CCTTTTATTTTGCTCTACCCAGTAACTGCGCTGGTACATAGACGCACTGAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262844.10
CDS-3UTR GCA 90 bp ATTACAAGTCTCACCATTGTATCACCAAGAACTCATTATGCTGGTGACAGATTCAGAGGGTACAGCCGCTaGCGCTACCTCCTCCGGTTA +
Preference number: 4 (lower is better)
Translates to: ITSLTIVSPRTHYAGDRFRGYSR*RYLLRL
Trigger: TAACCGGAGGAGGTAGCGGCAGCGGCTGTACCCTCT...GAATCTGTCACCAGCATAATGAGTTCTTGGTGATACAATGGTGAGACTTGTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262844.10
CDS-3UTR GCA 90 bp TTAGTTAAGGCATCACAACTGAAAATGGTTATTTCAACAATGGATGCTGTGGATCTCATCCTGCCAGACTaGCTGGTGCCTCCGTGCCCC +
Preference number: 4 (lower is better)
Translates to: LVKASQLKMVISTMDAVDLILPD*LVPPCP
Trigger: GGGGCACGGAGGCACCAGGCAGTCTGGCAGGATGAG...ATCCACAGCATCCATTGTTGAAATAACCATTTTCAGTTGTGATGCCTTAACTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372057.1
CDS-3UTR CCA 90 bp TTAGTTAAGGCATCACAACTGAAAATGGTTATTTCAACAATGGATGCTGTGGATCTCTCTCCGCTGCAGTaGGAGGAGGAGGAGGCGCCA +
Preference number: 4 (lower is better)
Translates to: LVKASQLKMVISTMDAVDLSPLQ*EEEEAP
Trigger: TGGCGCCTCCTCCTCCTCCCACTGCAGCGGAGAGAG...ATCCACAGCATCCATTGTTGAAATAACCATTTTCAGTTGTGATGCCTTAACTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262844.10
ENST00000372059.6
CDS-3UTR CCA 90 bp TTAGTTAAGGCATCACAACTGAAAATGGTTATTTCAACAATGGATGCTGTGGATTCCCCAGCTCGGCACTaGCTCTCTCCGCTGCAGTGG +
Preference number: 4 (lower is better)
Translates to: LVKASQLKMVISTMDAVDSPARH*LSPLQW
Trigger: CCACTGCAGCGGAGAGAGCCAGTGCCGAGCTGGGGA...ATCCACAGCATCCATTGTTGAAATAACCATTTTCAGTTGTGATGCCTTAACTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262844.10
ENST00000372059.6
CDS-3UTR TCA 90 bp AGTCAGAGGTGGTTACAAAAGTTTGTTTGCTCAGTGCGTCTATGTACCAGCGCAGTTGGGAAATATTGCTaGCCTCGTCCTTTGAAGCCT +
Preference number: 4 (lower is better)
Translates to: SQRWLQKFVCSVRLCTSAVGKYC*PRPLKP
Trigger: AGGCTTCAAAGGACGAGGTCAGCAATATTTCCCAAC...TGCGCTGGTACATAGACGCACTGAGCAAACAAACTTTTGTAACCACCTCTGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262844.10
CDS-3UTR GCA 90 bp AGTCAGAGGTGGTTACAAAAGTTTGTTTGCTCAGTGCGTCTATGTACCAGCGCAAGGGGAAGCAAGCCTTaGACTTCCTCCATCAATTTC +
Preference number: 4 (lower is better)
Translates to: SQRWLQKFVCSVRLCTSARGSKP*TSSINF
Trigger: GAAATTGATGGAGGAAGTGCAAGGCTTGCTTCCCCT...TGCGCTGGTACATAGACGCACTGAGCAAACAAACTTTTGTAACCACCTCTGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262844.10
CDS-3UTR GCA 90 bp AGTCAGAGGTGGTTACAAAAGTTTGTTTGCTCAGTGCGTCTATGTACCAGCGCAAGTTTGTTTGCTCAGTaGGTCTATGTACCAGCGCAG +
Preference number: 4 (lower is better)
Translates to: SQRWLQKFVCSVRLCTSASLFAQ*VYVPAQ
Trigger: CTGCGCTGGTACATAGACGCACTGAGCAAACAAACT...TGCGCTGGTACATAGACGCACTGAGCAAACAAACTTTTGTAACCACCTCTGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262844.10
CDS-3UTR GCA 90 bp TTAGTTAAGGCATCACAACTGAAAATGGTTATTTCAACAATGGATGCTGTGGATTGCCAGACTGCCTGGTaGCTCCGTGCCCCTTACCGT +
Preference number: 4 (lower is better)
Translates to: LVKASQLKMVISTMDAVDCQTAW*LRAPYR
Trigger: ACGGTAAGGGGCACGGAGGCACCAGGCAGTCTGGCA...ATCCACAGCATCCATTGTTGAAATAACCATTTTCAGTTGTGATGCCTTAACTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372057.1
CDS-3UTR CCA 90 bp TTAGTTAAGGCATCACAACTGAAAATGGTTATTTCAACAATGGATGCTGTGGATTCCTGCCAGACTGCCTaGTGCCTCCGTGCCCCTTAC +
Preference number: 4 (lower is better)
Translates to: LVKASQLKMVISTMDAVDSCQTA*CLRAPY
Trigger: GTAAGGGGCACGGAGGCACCAGGCAGTCTGGCAGGA...ATCCACAGCATCCATTGTTGAAATAACCATTTTCAGTTGTGATGCCTTAACTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372057.1
CDS-3UTR CCA 90 bp TCGACATCAGTAAGTTATCTTTGTATGCATCATGGGAAGACTATACTTGCAGATAGCAGGCTTCATACCTaGAGCTCGGGTGGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: STSVSYLCMHHGKTILADSRLHT*SSGGWP
Trigger: TGGCCACCCACCCGAGCTCCAGGTATGAAGCCTGCT...ATCTGCAAGTATAGTCTTCCCATGATGCATACAAAGATAACTTACTGATGTCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372057.1
3UTR CAA 72 bp AAACTATCCTTTTCCCCCAAGCCATGTTGGGAAATATaGCTGACCTCGTCCTTTGAAGCCTGCAGGATGGTT +
Preference number: 4 (lower is better)
Translates to: KLSFSPKPCWEI*LTSSFEACRMV
Trigger: AACCATCCTGCAGGCTTCAAAGGACGAGGTCAGCAATATTTCCCAACATGGCTTGGGGGAAAAGGATAGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262844.10
CDS-3UTR GCA 90 bp TTAGTTAAGGCATCACAACTGAAAATGGTTATTTCAACAATGGATGCTGTGGATAGAGGGTACAGCCGCTaGCGCTACCTCCTCCGGTTA +
Preference number: 4 (lower is better)
Translates to: LVKASQLKMVISTMDAVDRGYSR*RYLLRL
Trigger: TAACCGGAGGAGGTAGCGGCAGCGGCTGTACCCTCT...ATCCACAGCATCCATTGTTGAAATAACCATTTTCAGTTGTGATGCCTTAACTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262844.10
ENST00000372059.6
CDS-3UTR CCA 90 bp TCGACATCAGTAAGTTATCTTTGTATGCATCATGGGAAGACTATACTTGCAGATGAGAGGCCCAGTGACTaGTTGTGCGGCTCAGTGTCA +
Preference number: 4 (lower is better)
Translates to: STSVSYLCMHHGKTILADERPSD*LCGSVS
Trigger: TGACACTGAGCCGCACAACCAGTCACTGGGCCTCTC...ATCTGCAAGTATAGTCTTCCCATGATGCATACAAAGATAACTTACTGATGTCGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262844.10
ENST00000372057.1
ENST00000372059.6
CDS-3UTR CCA 90 bp TTGCTCAGTGCGTCTATGTACCAGCGCAGTTACTGGGTAGAGCAAAATAAAAGGCTGGGGATATATGTATaGACCTCCTATCGACATCAG +
Preference number: 4 (lower is better)
Translates to: LLSASMYQRSYWVEQNKRLGIYV*TSYRHQ
Trigger: CTGATGTCGATAGGAGGTCCATACATATATCCCCAG...CCTTTTATTTTGCTCTACCCAGTAACTGCGCTGGTACATAGACGCACTGAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262844.10
CDS-3UTR CCA 90 bp TTAGTTAAGGCATCACAACTGAAAATGGTTATTTCAACAATGGATGCTGTGGATTACCTGGAGCTCGGGTaGGTGGCCATCATGTCAGGG +
Preference number: 4 (lower is better)
Translates to: LVKASQLKMVISTMDAVDYLELG*VAIMSG
Trigger: CCCTGACATGATGGCCACCCACCCGAGCTCCAGGTA...ATCCACAGCATCCATTGTTGAAATAACCATTTTCAGTTGTGATGCCTTAACTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372057.1
CDS-3UTR TCA 90 bp TTAGTTAAGGCATCACAACTGAAAATGGTTATTTCAACAATGGATGCTGTGGATGCAGCACATCTCTGCTaGCACCACCATCTTCCGGGA +
Preference number: 4 (lower is better)
Translates to: LVKASQLKMVISTMDAVDAAHLC*HHHLPG
Trigger: TCCCGGAAGATGGTGGTGTCAGCAGAGATGTGCTGC...ATCCACAGCATCCATTGTTGAAATAACCATTTTCAGTTGTGATGCCTTAACTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262844.10
ENST00000372057.1
ENST00000372059.6
CDS-3UTR TCA 90 bp TCGACATCAGTAAGTTATCTTTGTATGCATCATGGGAAGACTATACTTGCAGATAGTGAGCAGAGACACTaGGCAGAAAAGCCGTGGCAG +
Preference number: 4 (lower is better)
Translates to: STSVSYLCMHHGKTILADSEQRH*AEKPWQ
Trigger: CTGCCACGGCTTTTCTGCTCAGTGTCTCTGCTCACT...ATCTGCAAGTATAGTCTTCCCATGATGCATACAAAGATAACTTACTGATGTCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262844.10
ENST00000372057.1
ENST00000372059.6
CDS-3UTR GCA 90 bp TTAGTTAAGGCATCACAACTGAAAATGGTTATTTCAACAATGGATGCTGTGGATGGATGTCTCTCATCCTaGCAGACTGCCTGGTGCCTC +
Preference number: 4 (lower is better)
Translates to: LVKASQLKMVISTMDAVDGCLSS*QTAWCL
Trigger: GAGGCACCAGGCAGTCTGGCAGGATGAGAGACATCC...ATCCACAGCATCCATTGTTGAAATAACCATTTTCAGTTGTGATGCCTTAACTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372057.1
CDS-3UTR CCA 90 bp TTAGTTAAGGCATCACAACTGAAAATGGTTATTTCAACAATGGATGCTGTGGATGAGAGGCCCAGTGACTaGTTGTGCGGCTCAGTGTCA +
Preference number: 4 (lower is better)
Translates to: LVKASQLKMVISTMDAVDERPSD*LCGSVS
Trigger: TGACACTGAGCCGCACAACCAGTCACTGGGCCTCTC...ATCCACAGCATCCATTGTTGAAATAACCATTTTCAGTTGTGATGCCTTAACTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262844.10
ENST00000372057.1
ENST00000372059.6
CDS-3UTR CCA 90 bp ATTACAAGTCTCACCATTGTATCACCAAGAACTCATTATGCTGGTGACAGATTCAAACTTCCGGTGTGCTaGGCACTGGGACTGTATGTG +
Preference number: 4 (lower is better)
Translates to: ITSLTIVSPRTHYAGDRFKLPVC*ALGLYV
Trigger: CACATACAGTCCCAGTGCCCAGCACACCGGAAGTTT...GAATCTGTCACCAGCATAATGAGTTCTTGGTGATACAATGGTGAGACTTGTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262844.10
CDS-3UTR CCA 90 bp TTAGTTAAGGCATCACAACTGAAAATGGTTATTTCAACAATGGATGCTGTGGATGCTTCTTTGAGCCTGTaGCCCGGCAAGGTAGTCAGG +
Preference number: 4 (lower is better)
Translates to: LVKASQLKMVISTMDAVDASLSL*PGKVVR
Trigger: CCTGACTACCTTGCCGGGCCACAGGCTCAAAGAAGC...ATCCACAGCATCCATTGTTGAAATAACCATTTTCAGTTGTGATGCCTTAACTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372057.1
CDS-3UTR CCA 90 bp TTAGTTAAGGCATCACAACTGAAAATGGTTATTTCAACAATGGATGCTGTGGATTGGAGCTCGGGTGGGTaGCCATCATGTCAGGGTAGT +
Preference number: 4 (lower is better)
Translates to: LVKASQLKMVISTMDAVDWSSGG*PSCQGS
Trigger: ACTACCCTGACATGATGGCCACCCACCCGAGCTCCA...ATCCACAGCATCCATTGTTGAAATAACCATTTTCAGTTGTGATGCCTTAACTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372057.1
CDS-3UTR TCA 90 bp AGTCAGAGGTGGTTACAAAAGTTTGTTTGCTCAGTGCGTCTATGTACCAGCGCAGTTGAACCGATGAGATaGTGGATAAGATGGATTTCA +
Preference number: 4 (lower is better)
Translates to: SQRWLQKFVCSVRLCTSAVEPMR*WIRWIS
Trigger: TGAAATCCATCTTATCCATCATCTCATCGGTTCAAC...TGCGCTGGTACATAGACGCACTGAGCAAACAAACTTTTGTAACCACCTCTGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262844.10
CDS-3UTR TCA 90 bp TTAGTTAAGGCATCACAACTGAAAATGGTTATTTCAACAATGGATGCTGTGGATAGTCAGAAGGCCACTTaGGGGGTGGGGGACAATTTG +
Preference number: 4 (lower is better)
Translates to: LVKASQLKMVISTMDAVDSQKAT*GVGDNL
Trigger: CAAATTGTCCCCCACCCCTCAAGTGGCCTTCTGACT...ATCCACAGCATCCATTGTTGAAATAACCATTTTCAGTTGTGATGCCTTAACTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000262844.10
CDS-3UTR TCA 90 bp TTGCTCAGTGCGTCTATGTACCAGCGCAGTTACTGGGTAGAGCAAAATAAAAGGCTGTATGTGCTGGACTaGAAATCTTACAACTGCTTT +
Preference number: 4 (lower is better)
Translates to: LLSASMYQRSYWVEQNKRLYVLD*KSYNCF
Trigger: AAAGCAGTTGTAAGATTTTCAGTCCAGCACATACAG...CCTTTTATTTTGCTCTACCCAGTAACTGCGCTGGTACATAGACGCACTGAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262844.10
CDS-3UTR GCA 90 bp ATTACAAGTCTCACCATTGTATCACCAAGAACTCATTATGCTGGTGACAGATTCATATGGTCCCATCCTTaGTCCTTTGCAACCTCCGGT +
Preference number: 4 (lower is better)
Translates to: ITSLTIVSPRTHYAGDRFIWSHP*SFATSG
Trigger: ACCGGAGGTTGCAAAGGAGCAAGGATGGGACCATAT...GAATCTGTCACCAGCATAATGAGTTCTTGGTGATACAATGGTGAGACTTGTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262844.10
CDS-3UTR GCA 90 bp TTGCTCAGTGCGTCTATGTACCAGCGCAGTTACTGGGTAGAGCAAAATAAAAGGTCACGGACCTTTGAATaGTCACTACTAGAACTAAAG +
Preference number: 4 (lower is better)
Translates to: LLSASMYQRSYWVEQNKRSRTFE*SLLELK
Trigger: CTTTAGTTCTAGTAGTGAGCATTCAAAGGTCCGTGA...CCTTTTATTTTGCTCTACCCAGTAACTGCGCTGGTACATAGACGCACTGAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262844.10
CDS-3UTR GCA 90 bp TTAGTTAAGGCATCACAACTGAAAATGGTTATTTCAACAATGGATGCTGTGGATAGGCTCCCGAATGCCTaGCGAGTCAGTTGCATCAGA +
Preference number: 4 (lower is better)
Translates to: LVKASQLKMVISTMDAVDRLPNA*RVSCIR
Trigger: TCTGATGCAACTGACTCGGCAGGCATTCGGGAGCCT...ATCCACAGCATCCATTGTTGAAATAACCATTTTCAGTTGTGATGCCTTAACTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372057.1
CDS-3UTR CCA 90 bp TTAGTTAAGGCATCACAACTGAAAATGGTTATTTCAACAATGGATGCTGTGGATCCTCCGGTAGGTAGGTaGCGGTGCGTTTTGATCCTT +
Preference number: 4 (lower is better)
Translates to: LVKASQLKMVISTMDAVDPPVGR*RCVLIL
Trigger: AAGGATCAAAACGCACCGCCACCTACCTACCGGAGG...ATCCACAGCATCCATTGTTGAAATAACCATTTTCAGTTGTGATGCCTTAACTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262844.10
ENST00000372057.1
ENST00000372059.6
CDS-3UTR CCA 90 bp AGTCAGAGGTGGTTACAAAAGTTTGTTTGCTCAGTGCGTCTATGTACCAGCGCATTAGAATCTGGTACCTaGCTGACCTTGTTTAAGAAC +
Preference number: 4 (lower is better)
Translates to: SQRWLQKFVCSVRLCTSALESGT*LTLFKN
Trigger: GTTCTTAAACAAGGTCAGCCAGGTACCAGATTCTAA...TGCGCTGGTACATAGACGCACTGAGCAAACAAACTTTTGTAACCACCTCTGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262844.10
CDS-3UTR CCA 90 bp TTGCTCAGTGCGTCTATGTACCAGCGCAGTTACTGGGTAGAGCAAAATAAAAGGTGGGACTGTATGTGCTaGACTGAAAATCTTACAACT +
Preference number: 4 (lower is better)
Translates to: LLSASMYQRSYWVEQNKRWDCMC*TENLTT
Trigger: AGTTGTAAGATTTTCAGTCCAGCACATACAGTCCCA...CCTTTTATTTTGCTCTACCCAGTAACTGCGCTGGTACATAGACGCACTGAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262844.10
CDS-3UTR CCA 90 bp ATTACAAGTCTCACCATTGTATCACCAAGAACTCATTATGCTGGTGACAGATTCGCATTTGGGCATGGCTaGGGGCTTCTTTGGTTTGAT +
Preference number: 4 (lower is better)
Translates to: ITSLTIVSPRTHYAGDRFAFGHG*GLLWFD
Trigger: ATCAAACCAAAGAAGCCCCCAGCCATGCCCAAATGC...GAATCTGTCACCAGCATAATGAGTTCTTGGTGATACAATGGTGAGACTTGTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262844.10
CDS-3UTR TCA 90 bp TTGCTCAGTGCGTCTATGTACCAGCGCAGTTACTGGGTAGAGCAAAATAAAAGGAGGATTTTTGAATTCTaGACTAGCAGTCTGTCACTT +
Preference number: 4 (lower is better)
Translates to: LLSASMYQRSYWVEQNKRRIFEF*TSSLSL
Trigger: AAGTGACAGACTGCTAGTTCAGAATTCAAAAATCCT...CCTTTTATTTTGCTCTACCCAGTAACTGCGCTGGTACATAGACGCACTGAGCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262844.10
CDS-3UTR TCA 90 bp TTAGTTAAGGCATCACAACTGAAAATGGTTATTTCAACAATGGATGCTGTGGATGGACGAGGAGCCTGTTaGACCGATGAGATGATGGAT +
Preference number: 4 (lower is better)
Translates to: LVKASQLKMVISTMDAVDGRGAC*TDEMMD
Trigger: ATCCATCATCTCATCGGTTCAACAGGCTCCTCGTCC...ATCCACAGCATCCATTGTTGAAATAACCATTTTCAGTTGTGATGCCTTAACTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262844.10
CDS-3UTR TCA 90 bp TTAGTTAAGGCATCACAACTGAAAATGGTTATTTCAACAATGGATGCTGTGGATGCTGACCTCGTCCTTTaGAGCCTGCAGGATGGTTAT +
Preference number: 4 (lower is better)
Translates to: LVKASQLKMVISTMDAVDADLVL*SLQDGY
Trigger: ATAACCATCCTGCAGGCTTCAAAGGACGAGGTCAGC...ATCCACAGCATCCATTGTTGAAATAACCATTTTCAGTTGTGATGCCTTAACTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262844.10
CDS-3UTR TCA 90 bp TTGCTCAGTGCGTCTATGTACCAGCGCAGTTACTGGGTAGAGCAAAATAAAAGGATCAGAATCTTCGTCTaGGTTAAAGACATGCTACAT +
Preference number: 4 (lower is better)
Translates to: LLSASMYQRSYWVEQNKRIRIFV*VKDMLH
Trigger: ATGTAGCATGTCTTTAACTCAGACGAAGATTCTGAT...CCTTTTATTTTGCTCTACCCAGTAACTGCGCTGGTACATAGACGCACTGAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262844.10
CDS-3UTR TCA 90 bp TTGCTCAGTGCGTCTATGTACCAGCGCAGTTACTGGGTAGAGCAAAATAAAAGGGTTTCAGGTAATCTGTaGTGTCTTACGGTAATCAAA +
Preference number: 4 (lower is better)
Translates to: LLSASMYQRSYWVEQNKRVSGNL*CLTVIK
Trigger: TTTGATTACCGTAAGACATCACAGATTACCTGAAAC...CCTTTTATTTTGCTCTACCCAGTAACTGCGCTGGTACATAGACGCACTGAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262844.10
CDS-3UTR GCA 90 bp TCGACATCAGTAAGTTATCTTTGTATGCATCATGGGAAGACTATACTTGCAGATATATGGTCCCATCCTTaGTCCTTTGCAACCTCCGGT +
Preference number: 4 (lower is better)
Translates to: STSVSYLCMHHGKTILADIWSHP*SFATSG
Trigger: ACCGGAGGTTGCAAAGGAGCAAGGATGGGACCATAT...ATCTGCAAGTATAGTCTTCCCATGATGCATACAAAGATAACTTACTGATGTCGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262844.10
ENST00000372057.1
ENST00000372059.6
CDS-3UTR GCA 90 bp AGTCAGAGGTGGTTACAAAAGTTTGTTTGCTCAGTGCGTCTATGTACCAGCGCAAAAATCCCTAAAAACTaGACACTTTCTTCCATCCAC +
Preference number: 4 (lower is better)
Translates to: SQRWLQKFVCSVRLCTSAKIPKN*TLSSIH
Trigger: GTGGATGGAAGAAAGTGTGCAGTTTTTAGGGATTTT...TGCGCTGGTACATAGACGCACTGAGCAAACAAACTTTTGTAACCACCTCTGACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000262844.10
CDS-3UTR GCA 90 bp AGTCAGAGGTGGTTACAAAAGTTTGTTTGCTCAGTGCGTCTATGTACCAGCGCATATAGCATATCTGAATaGCAACTCCATTTTCACAGG +
Preference number: 4 (lower is better)
Translates to: SQRWLQKFVCSVRLCTSAYSISE*QLHFHR
Trigger: CCTGTGAAAATGGAGTTGGCATTCAGATATGCTATA...TGCGCTGGTACATAGACGCACTGAGCAAACAAACTTTTGTAACCACCTCTGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262844.10
CDS-3UTR GCA 90 bp TTGCTCAGTGCGTCTATGTACCAGCGCAGTTACTGGGTAGAGCAAAATAAAAGGGAAATGGAAGCCTTTTaGTACATACCAAAGCAAAGT +
Preference number: 4 (lower is better)
Translates to: LLSASMYQRSYWVEQNKREMEAF*YIPKQS
Trigger: ACTTTGCTTTGGTATGTAGCAAAAGGCTTCCATTTC...CCTTTTATTTTGCTCTACCCAGTAACTGCGCTGGTACATAGACGCACTGAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262844.10
CDS-3UTR GCA 90 bp TCGACATCAGTAAGTTATCTTTGTATGCATCATGGGAAGACTATACTTGCAGATTACAAACTTCCGGTGTaGTGGGCACTGGGACTGTAT +
Preference number: 4 (lower is better)
Translates to: STSVSYLCMHHGKTILADYKLPV*WALGLY
Trigger: ATACAGTCCCAGTGCCCAGCACACCGGAAGTTTGTA...ATCTGCAAGTATAGTCTTCCCATGATGCATACAAAGATAACTTACTGATGTCGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262844.10
CDS-3UTR GCA 90 bp AGTCAGAGGTGGTTACAAAAGTTTGTTTGCTCAGTGCGTCTATGTACCAGCGCATTACAAAAGTTTGTTTaGTCAGTGCGTCTATGTACC +
Preference number: 4 (lower is better)
Translates to: SQRWLQKFVCSVRLCTSALQKFV*SVRLCT
Trigger: GGTACATAGACGCACTGAGCAAACAAACTTTTGTAA...TGCGCTGGTACATAGACGCACTGAGCAAACAAACTTTTGTAACCACCTCTGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262844.10
CDS-3UTR GCA 90 bp TTAGTTAAGGCATCACAACTGAAAATGGTTATTTCAACAATGGATGCTGTGGATTTACAGGCTCCCGAATaGCTGCCGAGTCAGTTGCAT +
Preference number: 4 (lower is better)
Translates to: LVKASQLKMVISTMDAVDLQAPE*LPSQLH
Trigger: ATGCAACTGACTCGGCAGGCATTCGGGAGCCTGTAA...ATCCACAGCATCCATTGTTGAAATAACCATTTTCAGTTGTGATGCCTTAACTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372057.1
CDS-3UTR CCA 90 bp TTGCTCAGTGCGTCTATGTACCAGCGCAGTTACTGGGTAGAGCAAAATAAAAGGTCTTTGTATGCATCATaGGAAGACTATACTTGCAGA +
Preference number: 4 (lower is better)
Translates to: LLSASMYQRSYWVEQNKRSLYAS*EDYTCR
Trigger: TCTGCAAGTATAGTCTTCCCATGATGCATACAAAGA...CCTTTTATTTTGCTCTACCCAGTAACTGCGCTGGTACATAGACGCACTGAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262844.10
CDS-3UTR CCA 90 bp AGTCAGAGGTGGTTACAAAAGTTTGTTTGCTCAGTGCGTCTATGTACCAGCGCAATCTGTCATTTTTCCTaGGGATATATGTATGGACCT +
Preference number: 4 (lower is better)
Translates to: SQRWLQKFVCSVRLCTSAICHFS*GYMYGP
Trigger: AGGTCCATACATATATCCCCAGGAAAAATGACAGAT...TGCGCTGGTACATAGACGCACTGAGCAAACAAACTTTTGTAACCACCTCTGACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262844.10
CDS-3UTR CCA 90 bp TTAGTTAAGGCATCACAACTGAAAATGGTTATTTCAACAATGGATGCTGTGGATCTCATGGGATTAGGTTaGCAGGAGCGACTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: LVKASQLKMVISTMDAVDLMGLG*QERLSS
Trigger: AGAGGACAGTCGCTCCTGCCAACCTAATCCCATGAG...ATCCACAGCATCCATTGTTGAAATAACCATTTTCAGTTGTGATGCCTTAACTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372057.1
3UTR CAA 72 bp CTCCAGGTAGCTTTTTGCTCATTACAAGTCTCACCATaGTATCACCAAGAACTCATTATGCTGGTGACAGAT +
Preference number: 4 (lower is better)
Translates to: LQVAFCSLQVSP*YHQELIMLVTD
Trigger: ATCTGTCACCAGCATAATGAGTTCTTGGTGATACAATGGTGAGACTTGTAATGAGCAAAAAGCTACCTGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262844.10
3UTR CAA 72 bp GAAAGAAGGAAAAGAGGAGCTACTCCAGGTAGCTTTTaGCTCATTACAAGTCTCACCATTGTATCACCAAGA +
Preference number: 4 (lower is better)
Translates to: ERRKRGATPGSF*LITSLTIVSPR
Trigger: TCTTGGTGATACAATGGTGAGACTTGTAATGAGCAAAAAGCTACCTGGAGTAGCTCCTCTTTTCCTTCTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262844.10
CDS-3UTR TCA 90 bp ATTACAAGTCTCACCATTGTATCACCAAGAACTCATTATGCTGGTGACAGATTCCATGATGATCTTAGTTaGCGATGTCGAAGCTTCACC +
Preference number: 4 (lower is better)
Translates to: ITSLTIVSPRTHYAGDRFHDDLS*RCRSFT
Trigger: GGTGAAGCTTCGACATCGTCAACTAAGATCATCATG...GAATCTGTCACCAGCATAATGAGTTCTTGGTGATACAATGGTGAGACTTGTAAT
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262844.10
CDS-3UTR GCA 90 bp TTAGTTAAGGCATCACAACTGAAAATGGTTATTTCAACAATGGATGCTGTGGATGAACTGGACAGTTTCTaGTTCTTCACCCCGCAGCAA +
Preference number: 4 (lower is better)
Translates to: LVKASQLKMVISTMDAVDELDSF*FFTPQQ
Trigger: TTGCTGCGGGGTGAAGAAGCAGAAACTGTCCAGTTC...ATCCACAGCATCCATTGTTGAAATAACCATTTTCAGTTGTGATGCCTTAACTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262844.10
ENST00000372059.6
CDS-3UTR GCA 90 bp TTAGTTAAGGCATCACAACTGAAAATGGTTATTTCAACAATGGATGCTGTGGATATATGGTCCCATCCTTaGTCCTTTGCAACCTCCGGT +
Preference number: 4 (lower is better)
Translates to: LVKASQLKMVISTMDAVDIWSHP*SFATSG
Trigger: ACCGGAGGTTGCAAAGGAGCAAGGATGGGACCATAT...ATCCACAGCATCCATTGTTGAAATAACCATTTTCAGTTGTGATGCCTTAACTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262844.10
ENST00000372057.1
ENST00000372059.6
CDS-3UTR GCA 90 bp TCGACATCAGTAAGTTATCTTTGTATGCATCATGGGAAGACTATACTTGCAGATACCAGTCACGTGACCTaGTCAAGATTGATTAGCACC +
Preference number: 4 (lower is better)
Translates to: STSVSYLCMHHGKTILADTSHVT*SRLIST
Trigger: GGTGCTAATCAATCTTGAGCAGGTCACGTGACTGGT...ATCTGCAAGTATAGTCTTCCCATGATGCATACAAAGATAACTTACTGATGTCGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262844.10
CDS-3UTR GCA 90 bp TCGACATCAGTAAGTTATCTTTGTATGCATCATGGGAAGACTATACTTGCAGATGCCTGCCGAGTCAGTTaGATCAGATTAGGAAGTGAT +
Preference number: 4 (lower is better)
Translates to: STSVSYLCMHHGKTILADACRVS*IRLGSD
Trigger: ATCACTTCCTAATCTGATGCAACTGACTCGGCAGGC...ATCTGCAAGTATAGTCTTCCCATGATGCATACAAAGATAACTTACTGATGTCGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372057.1
CDS-3UTR GCA 90 bp TCGACATCAGTAAGTTATCTTTGTATGCATCATGGGAAGACTATACTTGCAGATGGACTCATGGTGAGGTaGAGAAGAATTTGGAACAGG +
Preference number: 4 (lower is better)
Translates to: STSVSYLCMHHGKTILADGLMVR*RRIWNR
Trigger: CCTGTTCCAAATTCTTCTGCACCTCACCATGAGTCC...ATCTGCAAGTATAGTCTTCCCATGATGCATACAAAGATAACTTACTGATGTCGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372057.1
CDS-3UTR CCA 90 bp TCGACATCAGTAAGTTATCTTTGTATGCATCATGGGAAGACTATACTTGCAGATCCATGTTACAAACAGTaGGTAGGGCTCGTTGGTGAA +
Preference number: 4 (lower is better)
Translates to: STSVSYLCMHHGKTILADPCYKQ*VGLVGE
Trigger: TTCACCAACGAGCCCTACCCACTGTTTGTAACATGG...ATCTGCAAGTATAGTCTTCCCATGATGCATACAAAGATAACTTACTGATGTCGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262844.10
ENST00000372057.1
CDS-3UTR CCA 90 bp ATTACAAGTCTCACCATTGTATCACCAAGAACTCATTATGCTGGTGACAGATTCCTCATCCCTTGTCATTaGGGGAAAACGGCTATCTTT +
Preference number: 4 (lower is better)
Translates to: ITSLTIVSPRTHYAGDRFLIPCH*GKTAIF
Trigger: AAAGATAGCCGTTTTCCCCCAATGACAAGGGATGAG...GAATCTGTCACCAGCATAATGAGTTCTTGGTGATACAATGGTGAGACTTGTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262844.10
CDS-3UTR CCA 90 bp ATTACAAGTCTCACCATTGTATCACCAAGAACTCATTATGCTGGTGACAGATTCGTCGAAGCTTCACCATaGCAACGGAAACTATCATCA +
Preference number: 4 (lower is better)
Translates to: ITSLTIVSPRTHYAGDRFVEASP*QRKLSS
Trigger: TGATGATAGTTTCCGTTGCCATGGTGAAGCTTCGAC...GAATCTGTCACCAGCATAATGAGTTCTTGGTGATACAATGGTGAGACTTGTAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262844.10
CDS-3UTR GCA 90 bp TCGACATCAGTAAGTTATCTTTGTATGCATCATGGGAAGACTATACTTGCAGATGTAGGTAGGTGGCGGTaGGTTTTGATCCTTTTTCAT +
Preference number: 4 (lower is better)
Translates to: STSVSYLCMHHGKTILADVGRWR*VLILFH
Trigger: ATGAAAAAGGATCAAAACGCACCGCCACCTACCTAC...ATCTGCAAGTATAGTCTTCCCATGATGCATACAAAGATAACTTACTGATGTCGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262844.10
ENST00000372057.1
ENST00000372059.6
CDS-3UTR GCA 90 bp TTAGTTAAGGCATCACAACTGAAAATGGTTATTTCAACAATGGATGCTGTGGATTATGGCGGAAGGGGATaGCCAATGCCATTTTGGAAA +
Preference number: 4 (lower is better)
Translates to: LVKASQLKMVISTMDAVDYGGRG*PMPFWK
Trigger: TTTCCAAAATGGCATTGGGCATCCCCTTCCGCCATA...ATCCACAGCATCCATTGTTGAAATAACCATTTTCAGTTGTGATGCCTTAACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262844.10
ENST00000372057.1
ENST00000372059.6
CDS-3UTR GCA 90 bp TCGACATCAGTAAGTTATCTTTGTATGCATCATGGGAAGACTATACTTGCAGATAAAACTAAAGCAATTTaGTTTGCCCCAGTGGCAGGC +
Preference number: 4 (lower is better)
Translates to: STSVSYLCMHHGKTILADKTKAI*FAPVAG
Trigger: GCCTGCCACTGGGGCAAAGCAAATTGCTTTAGTTTT...ATCTGCAAGTATAGTCTTCCCATGATGCATACAAAGATAACTTACTGATGTCGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262844.10
ENST00000372057.1
ENST00000372059.6
CDS-3UTR GCA 90 bp ATTACAAGTCTCACCATTGTATCACCAAGAACTCATTATGCTGGTGACAGATTCTCGTCCTTTGAAGCCTaGAGGATGGTTATTTCTTCA +
Preference number: 4 (lower is better)
Translates to: ITSLTIVSPRTHYAGDRFSSFEA*RMVISS
Trigger: TGAAGAAATAACCATCCTGCAGGCTTCAAAGGACGA...GAATCTGTCACCAGCATAATGAGTTCTTGGTGATACAATGGTGAGACTTGTAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262844.10
CDS-3UTR CCA 90 bp TCGACATCAGTAAGTTATCTTTGTATGCATCATGGGAAGACTATACTTGCAGATCTCATCCCTTGTCATTaGGGGAAAACGGCTATCTTT +
Preference number: 4 (lower is better)
Translates to: STSVSYLCMHHGKTILADLIPCH*GKTAIF
Trigger: AAAGATAGCCGTTTTCCCCCAATGACAAGGGATGAG...ATCTGCAAGTATAGTCTTCCCATGATGCATACAAAGATAACTTACTGATGTCGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262844.10
ENST00000372057.1
ENST00000372059.6
CDS-3UTR CCA 90 bp ATTACAAGTCTCACCATTGTATCACCAAGAACTCATTATGCTGGTGACAGATTCTCTATGGTCTGTATATaGTCCCATCCTTGCTCCTTT +
Preference number: 4 (lower is better)
Translates to: ITSLTIVSPRTHYAGDRFSMVCI*SHPCSF
Trigger: AAAGGAGCAAGGATGGGACCATATACAGACCATAGA...GAATCTGTCACCAGCATAATGAGTTCTTGGTGATACAATGGTGAGACTTGTAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262844.10
CDS-3UTR CCA 90 bp TTAGTTAAGGCATCACAACTGAAAATGGTTATTTCAACAATGGATGCTGTGGATGGAATAATGGTTGTATaGCGGAAGGGGATGCCCAAT +
Preference number: 4 (lower is better)
Translates to: LVKASQLKMVISTMDAVDGIMVV*RKGMPN
Trigger: ATTGGGCATCCCCTTCCGCCATACAACCATTATTCC...ATCCACAGCATCCATTGTTGAAATAACCATTTTCAGTTGTGATGCCTTAACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262844.10
ENST00000372057.1
ENST00000372059.6
CDS-3UTR CCA 90 bp TCGACATCAGTAAGTTATCTTTGTATGCATCATGGGAAGACTATACTTGCAGATCTGGGGATATATGTATaGACCTCCTATCGACATCAG +
Preference number: 4 (lower is better)
Translates to: STSVSYLCMHHGKTILADLGIYV*TSYRHQ
Trigger: CTGATGTCGATAGGAGGTCCATACATATATCCCCAG...ATCTGCAAGTATAGTCTTCCCATGATGCATACAAAGATAACTTACTGATGTCGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262844.10
ENST00000372057.1
ENST00000372059.6
CDS-3UTR CCA 90 bp TTAGTTAAGGCATCACAACTGAAAATGGTTATTTCAACAATGGATGCTGTGGATAGGCCACTTGAGGGGTaGGGGACAATTTGTTCTTTT +
Preference number: 4 (lower is better)
Translates to: LVKASQLKMVISTMDAVDRPLEG*GTICSF
Trigger: AAAAGAACAAATTGTCCCCCACCCCTCAAGTGGCCT...ATCCACAGCATCCATTGTTGAAATAACCATTTTCAGTTGTGATGCCTTAACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262844.10
CDS-3UTR CCA 90 bp TCGACATCAGTAAGTTATCTTTGTATGCATCATGGGAAGACTATACTTGCAGATGGCTGGGGGCTTCTTTaGTTTGATCTAACACACATA +
Preference number: 4 (lower is better)
Translates to: STSVSYLCMHHGKTILADGWGLL*FDLTHI
Trigger: TATGTGTGTTAGATCAAACCAAAGAAGCCCCCAGCC...ATCTGCAAGTATAGTCTTCCCATGATGCATACAAAGATAACTTACTGATGTCGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262844.10
CDS-3UTR TCA 90 bp TCGACATCAGTAAGTTATCTTTGTATGCATCATGGGAAGACTATACTTGCAGATGGGGCTTCTTTGGTTTaGTCTAACACACATAAGAGA +
Preference number: 4 (lower is better)
Translates to: STSVSYLCMHHGKTILADGASLV*SNTHKR
Trigger: TCTCTTATGTGTGTTAGATCAAACCAAAGAAGCCCC...ATCTGCAAGTATAGTCTTCCCATGATGCATACAAAGATAACTTACTGATGTCGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262844.10
CDS-3UTR GCA 90 bp TTAGTTAAGGCATCACAACTGAAAATGGTTATTTCAACAATGGATGCTGTGGATGTAGGTAGGTGGCGGTaGGTTTTGATCCTTTTTCAT +
Preference number: 4 (lower is better)
Translates to: LVKASQLKMVISTMDAVDVGRWR*VLILFH
Trigger: ATGAAAAAGGATCAAAACGCACCGCCACCTACCTAC...ATCCACAGCATCCATTGTTGAAATAACCATTTTCAGTTGTGATGCCTTAACTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262844.10
ENST00000372057.1
ENST00000372059.6
CDS-3UTR GCA 90 bp TCGACATCAGTAAGTTATCTTTGTATGCATCATGGGAAGACTATACTTGCAGATCTAGAACACAACCTGTaGAATCAGAATCTTCGTCTG +
Preference number: 4 (lower is better)
Translates to: STSVSYLCMHHGKTILADLEHNL*NQNLRL
Trigger: CAGACGAAGATTCTGATTGCACAGGTTGTGTTCTAG...ATCTGCAAGTATAGTCTTCCCATGATGCATACAAAGATAACTTACTGATGTCGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262844.10
CDS-3UTR CCA 90 bp TTAGTTAAGGCATCACAACTGAAAATGGTTATTTCAACAATGGATGCTGTGGATCTCATCCCTTGTCATTaGGGGAAAACGGCTATCTTT +
Preference number: 4 (lower is better)
Translates to: LVKASQLKMVISTMDAVDLIPCH*GKTAIF
Trigger: AAAGATAGCCGTTTTCCCCCAATGACAAGGGATGAG...ATCCACAGCATCCATTGTTGAAATAACCATTTTCAGTTGTGATGCCTTAACTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262844.10
ENST00000372057.1
ENST00000372059.6
CDS-3UTR CCA 90 bp TCGACATCAGTAAGTTATCTTTGTATGCATCATGGGAAGACTATACTTGCAGATTCTATGGTCTGTATATaGTCCCATCCTTGCTCCTTT +
Preference number: 4 (lower is better)
Translates to: STSVSYLCMHHGKTILADSMVCI*SHPCSF
Trigger: AAAGGAGCAAGGATGGGACCATATACAGACCATAGA...ATCTGCAAGTATAGTCTTCCCATGATGCATACAAAGATAACTTACTGATGTCGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262844.10
ENST00000372057.1
ENST00000372059.6
CDS-3UTR CCA 90 bp TTAGTTAAGGCATCACAACTGAAAATGGTTATTTCAACAATGGATGCTGTGGATTTTGGAACAGGAAAATaGAGCTTACAGGCTCCCGAA +
Preference number: 4 (lower is better)
Translates to: LVKASQLKMVISTMDAVDFGTGK*SLQAPE
Trigger: TTCGGGAGCCTGTAAGCTCCATTTTCCTGTTCCAAA...ATCCACAGCATCCATTGTTGAAATAACCATTTTCAGTTGTGATGCCTTAACTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372057.1
CDS-3UTR TCA 90 bp TCGACATCAGTAAGTTATCTTTGTATGCATCATGGGAAGACTATACTTGCAGATAAACAGAAACCTGACTaGGACAGCAAAGCAAAATTC +
Preference number: 4 (lower is better)
Translates to: STSVSYLCMHHGKTILADKQKPD*DSKAKF
Trigger: GAATTTTGCTTTGCTGTCTCAGTCAGGTTTCTGTTT...ATCTGCAAGTATAGTCTTCCCATGATGCATACAAAGATAACTTACTGATGTCGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262844.10
ENST00000372057.1
ENST00000372059.6
CDS-3UTR TCA 90 bp TCGACATCAGTAAGTTATCTTTGTATGCATCATGGGAAGACTATACTTGCAGATAATGGATGCTGTGGATaGAGGAATACCAACAAACTT +
Preference number: 4 (lower is better)
Translates to: STSVSYLCMHHGKTILADNGCCG*RNTNKL
Trigger: AAGTTTGTTGGTATTCCTTCATCCACAGCATCCATT...ATCTGCAAGTATAGTCTTCCCATGATGCATACAAAGATAACTTACTGATGTCGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262844.10
ENST00000372057.1
ENST00000372059.6
CDS-3UTR TCA 90 bp TTAGTTAAGGCATCACAACTGAAAATGGTTATTTCAACAATGGATGCTGTGGATAATCTGGTACCTGGCTaGCCTTGTTTAAGAACAAGA +
Preference number: 4 (lower is better)
Translates to: LVKASQLKMVISTMDAVDNLVPG*PCLRTR
Trigger: TCTTGTTCTTAAACAAGGTCAGCCAGGTACCAGATT...ATCCACAGCATCCATTGTTGAAATAACCATTTTCAGTTGTGATGCCTTAACTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262844.10
CDS-3UTR TCA 90 bp TTAGTTAAGGCATCACAACTGAAAATGGTTATTTCAACAATGGATGCTGTGGATGGAACCTATTCCAGATaGCAGTTTCAAATTTCCTGC +
Preference number: 4 (lower is better)
Translates to: LVKASQLKMVISTMDAVDGTYSR*QFQISC
Trigger: GCAGGAAATTTGAAACTGTCATCTGGAATAGGTTCC...ATCCACAGCATCCATTGTTGAAATAACCATTTTCAGTTGTGATGCCTTAACTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262844.10
CDS-3UTR CCA 90 bp TTAGTTAAGGCATCACAACTGAAAATGGTTATTTCAACAATGGATGCTGTGGATTCTATGGTCTGTATATaGTCCCATCCTTGCTCCTTT +
Preference number: 4 (lower is better)
Translates to: LVKASQLKMVISTMDAVDSMVCI*SHPCSF
Trigger: AAAGGAGCAAGGATGGGACCATATACAGACCATAGA...ATCCACAGCATCCATTGTTGAAATAACCATTTTCAGTTGTGATGCCTTAACTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262844.10
ENST00000372057.1
ENST00000372059.6
CDS-3UTR CCA 90 bp TCGACATCAGTAAGTTATCTTTGTATGCATCATGGGAAGACTATACTTGCAGATTACTTGCAGATGAGCTaGGCTCTAACTATAGCATAT +
Preference number: 4 (lower is better)
Translates to: STSVSYLCMHHGKTILADYLQMS*ALTIAY
Trigger: ATATGCTATAGTTAGAGCCCAGCTCATCTGCAAGTA...ATCTGCAAGTATAGTCTTCCCATGATGCATACAAAGATAACTTACTGATGTCGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262844.10
ENST00000372057.1
ENST00000372059.6
CDS-3UTR CCA 90 bp TCGACATCAGTAAGTTATCTTTGTATGCATCATGGGAAGACTATACTTGCAGATCAAATAAATCACAACTaGCTAGAACACAACCTGTGC +
Preference number: 4 (lower is better)
Translates to: STSVSYLCMHHGKTILADQINHN*LEHNLC
Trigger: GCACAGGTTGTGTTCTAGCCAGTTGTGATTTATTTG...ATCTGCAAGTATAGTCTTCCCATGATGCATACAAAGATAACTTACTGATGTCGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262844.10
CDS-3UTR CCA 90 bp TTAGTTAAGGCATCACAACTGAAAATGGTTATTTCAACAATGGATGCTGTGGATTACCAGCGCAGTTACTaGGTAGAGCAAAATAAAAGG +
Preference number: 4 (lower is better)
Translates to: LVKASQLKMVISTMDAVDYQRSY*VEQNKR
Trigger: CCTTTTATTTTGCTCTACCCAGTAACTGCGCTGGTA...ATCCACAGCATCCATTGTTGAAATAACCATTTTCAGTTGTGATGCCTTAACTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262844.10
CDS-3UTR TCA 90 bp TTAGTTAAGGCATCACAACTGAAAATGGTTATTTCAACAATGGATGCTGTGGATAAACAGAAACCTGACTaGGACAGCAAAGCAAAATTC +
Preference number: 4 (lower is better)
Translates to: LVKASQLKMVISTMDAVDKQKPD*DSKAKF
Trigger: GAATTTTGCTTTGCTGTCTCAGTCAGGTTTCTGTTT...ATCCACAGCATCCATTGTTGAAATAACCATTTTCAGTTGTGATGCCTTAACTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262844.10
ENST00000372057.1
ENST00000372059.6
CDS-3UTR TCA 90 bp TCGACATCAGTAAGTTATCTTTGTATGCATCATGGGAAGACTATACTTGCAGATAGGATTTTTGAATTCTaGACTAGCAGTCTGTCACTT +
Preference number: 4 (lower is better)
Translates to: STSVSYLCMHHGKTILADRIFEF*TSSLSL
Trigger: AAGTGACAGACTGCTAGTTCAGAATTCAAAAATCCT...ATCTGCAAGTATAGTCTTCCCATGATGCATACAAAGATAACTTACTGATGTCGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262844.10
ENST00000372057.1
ENST00000372059.6
CDS-3UTR TCA 90 bp TTAGTTAAGGCATCACAACTGAAAATGGTTATTTCAACAATGGATGCTGTGGATAATGGATGCTGTGGATaGAGGAATACCAACAAACTT +
Preference number: 4 (lower is better)
Translates to: LVKASQLKMVISTMDAVDNGCCG*RNTNKL
Trigger: AAGTTTGTTGGTATTCCTTCATCCACAGCATCCATT...ATCCACAGCATCCATTGTTGAAATAACCATTTTCAGTTGTGATGCCTTAACTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262844.10
ENST00000372057.1
ENST00000372059.6
CDS-3UTR GCA 90 bp ATTACAAGTCTCACCATTGTATCACCAAGAACTCATTATGCTGGTGACAGATTCCAGAAAAAGTACCTATaGATCCACGTAATCTTTTGT +
Preference number: 4 (lower is better)
Translates to: ITSLTIVSPRTHYAGDRFQKKYL*IHVIFC
Trigger: ACAAAAGATTACGTGGATGCATAGGTACTTTTTCTG...GAATCTGTCACCAGCATAATGAGTTCTTGGTGATACAATGGTGAGACTTGTAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262844.10
CDS-3UTR GCA 90 bp TTAGTTAAGGCATCACAACTGAAAATGGTTATTTCAACAATGGATGCTGTGGATACTGAAAGACTAATCTaGTCCAAAATGCTCCCAAGT +
Preference number: 4 (lower is better)
Translates to: LVKASQLKMVISTMDAVDTERLI*SKMLPS
Trigger: ACTTGGGAGCATTTTGGAGCAGATTAGTCTTTCAGT...ATCCACAGCATCCATTGTTGAAATAACCATTTTCAGTTGTGATGCCTTAACTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262844.10
ENST00000372057.1
ENST00000372059.6
CDS-3UTR CCA 90 bp TCGACATCAGTAAGTTATCTTTGTATGCATCATGGGAAGACTATACTTGCAGATTTTCACTACGATACCTaGTCAGTTTTATGGTTTTCC +
Preference number: 4 (lower is better)
Translates to: STSVSYLCMHHGKTILADFHYDT*SVLWFS
Trigger: GGAAAACCATAAAACTGACCAGGTATCGTAGTGAAA...ATCTGCAAGTATAGTCTTCCCATGATGCATACAAAGATAACTTACTGATGTCGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262844.10
ENST00000372057.1
ENST00000372059.6
CDS-3UTR CCA 90 bp TCGACATCAGTAAGTTATCTTTGTATGCATCATGGGAAGACTATACTTGCAGATATCTGTCATTTTTCCTaGGGATATATGTATGGACCT +
Preference number: 4 (lower is better)
Translates to: STSVSYLCMHHGKTILADICHFS*GYMYGP
Trigger: AGGTCCATACATATATCCCCAGGAAAAATGACAGAT...ATCTGCAAGTATAGTCTTCCCATGATGCATACAAAGATAACTTACTGATGTCGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262844.10
ENST00000372057.1
ENST00000372059.6
CDS-3UTR CCA 90 bp ATTACAAGTCTCACCATTGTATCACCAAGAACTCATTATGCTGGTGACAGATTCAAAAGTAGTCAGAGGTaGTTACAAAAGTTTGTTTGC +
Preference number: 4 (lower is better)
Translates to: ITSLTIVSPRTHYAGDRFKSSQR*LQKFVC
Trigger: GCAAACAAACTTTTGTAACCACCTCTGACTACTTTT...GAATCTGTCACCAGCATAATGAGTTCTTGGTGATACAATGGTGAGACTTGTAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262844.10
CDS-3UTR TCA 90 bp TTAGTTAAGGCATCACAACTGAAAATGGTTATTTCAACAATGGATGCTGTGGATAGGATTTTTGAATTCTaGACTAGCAGTCTGTCACTT +
Preference number: 4 (lower is better)
Translates to: LVKASQLKMVISTMDAVDRIFEF*TSSLSL
Trigger: AAGTGACAGACTGCTAGTTCAGAATTCAAAAATCCT...ATCCACAGCATCCATTGTTGAAATAACCATTTTCAGTTGTGATGCCTTAACTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262844.10
ENST00000372057.1
ENST00000372059.6
CDS-3UTR GCA 90 bp TTAGTTAAGGCATCACAACTGAAAATGGTTATTTCAACAATGGATGCTGTGGATTATAGCATATCTGAATaGCAACTCCATTTTCACAGG +
Preference number: 4 (lower is better)
Translates to: LVKASQLKMVISTMDAVDYSISE*QLHFHR
Trigger: CCTGTGAAAATGGAGTTGGCATTCAGATATGCTATA...ATCCACAGCATCCATTGTTGAAATAACCATTTTCAGTTGTGATGCCTTAACTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262844.10
ENST00000372057.1
ENST00000372059.6
CDS-3UTR CCA 90 bp TTAGTTAAGGCATCACAACTGAAAATGGTTATTTCAACAATGGATGCTGTGGATTTTCACTACGATACCTaGTCAGTTTTATGGTTTTCC +
Preference number: 4 (lower is better)
Translates to: LVKASQLKMVISTMDAVDFHYDT*SVLWFS
Trigger: GGAAAACCATAAAACTGACCAGGTATCGTAGTGAAA...ATCCACAGCATCCATTGTTGAAATAACCATTTTCAGTTGTGATGCCTTAACTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000262844.10
ENST00000372057.1
ENST00000372059.6
CDS GCA 90 bp CGCCTCCTAGTCCCAGCTCCCCAGCTCGGCACTGGCTCTCTCCGCTaGAGTGGGAGGAGGAGGAGGCGCCACCACCGCCACCCGAGCCAG +
Preference number: 5 (lower is better)
Translates to: RLLVPAPQLGTGSLR*SGRRRRRHHRHPSQ
Trigger: CTGGCTCGGGTGGCGGTGGTGGCGCCTCCTCCTCCTCCCACTGCAGCGGAGAGAGCCAGTGCCGAGCTGGGGAGCTGGGACTAGGAGGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262844.10
ENST00000372059.6
CDS CCA 90 bp AGCCGCGTACCGGCGCCTCCTAGTCCCAGCTCCCCAGCTCGGCACTaGCTCTCTCCGCTGCAGTGGGAGGAGGAGGAGGCGCCACCACCG +
Preference number: 5 (lower is better)
Translates to: SRVPAPPSPSSPARH*LSPLQWEEEEAPPP
Trigger: CGGTGGTGGCGCCTCCTCCTCCTCCCACTGCAGCGGAGAGAGCCAGTGCCGAGCTGGGGAGCTGGGACTAGGAGGCGCCGGTACGCGGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262844.10
ENST00000372059.6
CDS TCA 90 bp TACAGCCGCTGCCGCTACCTCCTCCGGTTAGACCTCCCAGCCCGTTaGGCCGCGTACCGGCGCCTCCTAGTCCCAGCTCCCCAGCTCGGC +
Preference number: 5 (lower is better)
Translates to: YSRCRYLLRLDLPAR*AAYRRLLVPAPQLG
Trigger: GCCGAGCTGGGGAGCTGGGACTAGGAGGCGCCGGTACGCGGCTCAACGGGCTGGGAGGTCTAACCGGAGGAGGTAGCGGCAGCGGCTGTA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262844.10
ENST00000372059.6
CDS GCA 90 bp CTCAGACCACCCCCAGGATGTCTCTCATCCTGCCAGACTGCCTGGTaGCTCCGTGCCCCTTACCGTGAGGGTGCTGGCAGCCACACTGCT +
Preference number: 5 (lower is better)
Translates to: LRPPPGCLSSCQTAW*LRAPYREGAGSHTA
Trigger: AGCAGTGTGGCTGCCAGCACCCTCACGGTAAGGGGCACGGAGGCACCAGGCAGTCTGGCAGGATGAGAGACATCCTGGGGGTGGTCTGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372057.1
CDS GCA 90 bp CAGCCCACATCCAAACTCAGACCACCCCCAGGATGTCTCTCATCCTaGCAGACTGCCTGGTGCCTCCGTGCCCCTTACCGTGAGGGTGCT +
Preference number: 5 (lower is better)
Translates to: QPTSKLRPPPGCLSS*QTAWCLRAPYREGA
Trigger: AGCACCCTCACGGTAAGGGGCACGGAGGCACCAGGCAGTCTGGCAGGATGAGAGACATCCTGGGGGTGGTCTGAGTTTGGATGTGGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372057.1
CDS CCA 90 bp AAACTCAGACCACCCCCAGGATGTCTCTCATCCTGCCAGACTGCCTaGTGCCTCCGTGCCCCTTACCGTGAGGGTGCTGGCAGCCACACT +
Preference number: 5 (lower is better)
Translates to: KLRPPPGCLSSCQTA*CLRAPYREGAGSHT
Trigger: AGTGTGGCTGCCAGCACCCTCACGGTAAGGGGCACGGAGGCACCAGGCAGTCTGGCAGGATGAGAGACATCCTGGGGGTGGTCTGAGTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372057.1
CDS CCA 90 bp GGTGTAGGGTCTCCTGGGAAGAGGTCTGCAGAGAGGCCCAGTGACTaGTTGTGCGGCTCAGTGTCAGGAATAATGGTTGTATGGCGGAAG +
Preference number: 5 (lower is better)
Translates to: GVGSPGKRSAERPSD*LCGSVSGIMVVWRK
Trigger: CTTCCGCCATACAACCATTATTCCTGACACTGAGCCGCACAACCAGTCACTGGGCCTCTCTGCAGACCTCTTCCCAGGAGACCCTACACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262844.10
ENST00000372057.1
ENST00000372059.6
ENST00000680410.1
CDS TCA 90 bp AGAAGGTGTAGGGTCTCCTGGGAAGAGGTCTGCAGAGAGGCCCAGTaGCTGGTTGTGCGGCTCAGTGTCAGGAATAATGGTTGTATGGCG +
Preference number: 5 (lower is better)
Translates to: RRCRVSWEEVCREAQ*LVVRLSVRNNGCMA
Trigger: CGCCATACAACCATTATTCCTGACACTGAGCCGCACAACCAGTCACTGGGCCTCTCTGCAGACCTCTTCCCAGGAGACCCTACACCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262844.10
ENST00000372057.1
ENST00000372059.6
ENST00000680410.1
CDS CCA 90 bp TTGAGCCTGTGGCCCGGCAAGGTAGTCAGGCTCATGGGATTAGGTTaGCAGGAGCGACTGTCCTCTAAACGATTAGCCCAGAGAAAGAGA +
Preference number: 5 (lower is better)
Translates to: LSLWPGKVVRLMGLG*QERLSSKRLAQRKR
Trigger: TCTCTTTCTCTGGGCTAATCGTTTAGAGGACAGTCGCTCCTGCCAACCTAATCCCATGAGCCTGACTACCTTGCCGGGCCACAGGCTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680410.1
CDS-3UTR CAA 90 bp ATTACAAGTCTCACCATTGTATCACCAAGAACTCATTATGCTGGTGACAGATTCAGACCTCCCAGCCCGTaGAGCCGCGTACCGGCGCCT +
Preference number: 5 (lower is better)
Translates to: ITSLTIVSPRTHYAGDRFRPPSP*SRVPAP
Trigger: AGGCGCCGGTACGCGGCTCAACGGGCTGGGAGGTCT...GAATCTGTCACCAGCATAATGAGTTCTTGGTGATACAATGGTGAGACTTGTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262844.10
CDS-3UTR CAA 90 bp TTGCTCAGTGCGTCTATGTACCAGCGCAGTTACTGGGTAGAGCAAAATAAAAGGAGGCCCAGTGACTGGTaGTGCGGCTCAGTGTCAGGA +
Preference number: 5 (lower is better)
Translates to: LLSASMYQRSYWVEQNKRRPSDW*CGSVSG
Trigger: TCCTGACACTGAGCCGCACAACCAGTCACTGGGCCT...CCTTTTATTTTGCTCTACCCAGTAACTGCGCTGGTACATAGACGCACTGAGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262844.10
CDS-3UTR CAA 90 bp TCGACATCAGTAAGTTATCTTTGTATGCATCATGGGAAGACTATACTTGCAGATAGACCTCCCAGCCCGTaGAGCCGCGTACCGGCGCCT +
Preference number: 5 (lower is better)
Translates to: STSVSYLCMHHGKTILADRPPSP*SRVPAP
Trigger: AGGCGCCGGTACGCGGCTCAACGGGCTGGGAGGTCT...ATCTGCAAGTATAGTCTTCCCATGATGCATACAAAGATAACTTACTGATGTCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262844.10
ENST00000372059.6
CDS-3UTR CAA 90 bp AGTCAGAGGTGGTTACAAAAGTTTGTTTGCTCAGTGCGTCTATGTACCAGCGCACTTTTGAAGCAGCATTaGGGCATGGCTGGGGGCTTC +
Preference number: 5 (lower is better)
Translates to: SQRWLQKFVCSVRLCTSALLKQH*GMAGGF
Trigger: GAAGCCCCCAGCCATGCCCAAATGCTGCTTCAAAAG...TGCGCTGGTACATAGACGCACTGAGCAAACAAACTTTTGTAACCACCTCTGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262844.10
CDS-3UTR CAA 90 bp AGTCAGAGGTGGTTACAAAAGTTTGTTTGCTCAGTGCGTCTATGTACCAGCGCACTGGAAGGCAGGCTTTaGAAGCAGCATTTGGGCATG +
Preference number: 5 (lower is better)
Translates to: SQRWLQKFVCSVRLCTSALEGRL*KQHLGM
Trigger: CATGCCCAAATGCTGCTTCAAAAGCCTGCCTTCCAG...TGCGCTGGTACATAGACGCACTGAGCAAACAAACTTTTGTAACCACCTCTGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262844.10
CDS GCA 90 bp CTCAGTGTCAGGAATAATGGTTGTATGGCGGAAGGGGATGCCCAATaGCATTTTGGAAATGATGATGCTGGCGATGAGCAAGGTATTCAG +
Preference number: 5 (lower is better)
Translates to: LSVRNNGCMAEGDAQ*HFGNDDAGDEQGIQ
Trigger: CTGAATACCTTGCTCATCGCCAGCATCATCATTTCCAAAATGGCATTGGGCATCCCCTTCCGCCATACAACCATTATTCCTGACACTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262844.10
ENST00000372057.1
ENST00000372059.6
ENST00000680410.1
CDS-3UTR CAA 90 bp AGTCAGAGGTGGTTACAAAAGTTTGTTTGCTCAGTGCGTCTATGTACCAGCGCACTAAAGCAATTTGCTTaGCCCCAGTGGCAGGCAGAA +
Preference number: 5 (lower is better)
Translates to: SQRWLQKFVCSVRLCTSALKQFA*PQWQAE
Trigger: TTCTGCCTGCCACTGGGGCAAAGCAAATTGCTTTAG...TGCGCTGGTACATAGACGCACTGAGCAAACAAACTTTTGTAACCACCTCTGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262844.10
CDS-3UTR CAA 90 bp TCGACATCAGTAAGTTATCTTTGTATGCATCATGGGAAGACTATACTTGCAGATAGGCCCAGTGACTGGTaGTGCGGCTCAGTGTCAGGA +
Preference number: 5 (lower is better)
Translates to: STSVSYLCMHHGKTILADRPSDW*CGSVSG
Trigger: TCCTGACACTGAGCCGCACAACCAGTCACTGGGCCT...ATCTGCAAGTATAGTCTTCCCATGATGCATACAAAGATAACTTACTGATGTCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262844.10
ENST00000372057.1
ENST00000372059.6
CDS-3UTR CAA 90 bp TCGACATCAGTAAGTTATCTTTGTATGCATCATGGGAAGACTATACTTGCAGATAGCCACACTGCTTCTTaGAGCCTGTGGCCCGGCAAG +
Preference number: 5 (lower is better)
Translates to: STSVSYLCMHHGKTILADSHTAS*SLWPGK
Trigger: CTTGCCGGGCCACAGGCTCAAAGAAGCAGTGTGGCT...ATCTGCAAGTATAGTCTTCCCATGATGCATACAAAGATAACTTACTGATGTCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372057.1
CDS GCA 90 bp CAGGAAAATGGAGCTTACAGGCTCCCGAATGCCTGCCGAGTCAGTTaGATCAGATTAGGAAGTGATGATCCTAAGAATAAGATGTTTGGA +
Preference number: 5 (lower is better)
Translates to: QENGAYRLPNACRVS*IRLGSDDPKNKMFG
Trigger: TCCAAACATCTTATTCTTAGGATCATCACTTCCTAATCTGATGCAACTGACTCGGCAGGCATTCGGGAGCCTGTAAGCTCCATTTTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372057.1
CDS-3UTR CAA 90 bp TCGACATCAGTAAGTTATCTTTGTATGCATCATGGGAAGACTATACTTGCAGATGTGGCAGCTCATCCCTaGTCATTGGGGGAAAACGGC +
Preference number: 5 (lower is better)
Translates to: STSVSYLCMHHGKTILADVAAHP*SLGENG
Trigger: GCCGTTTTCCCCCAATGACAAGGGATGAGCTGCCAC...ATCTGCAAGTATAGTCTTCCCATGATGCATACAAAGATAACTTACTGATGTCGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262844.10
ENST00000372057.1
ENST00000372059.6
CDS-3UTR CAA 90 bp TCGACATCAGTAAGTTATCTTTGTATGCATCATGGGAAGACTATACTTGCAGATCCCATCCTTGCTCCTTaGCAACCTCCGGTAGGTAGG +
Preference number: 5 (lower is better)
Translates to: STSVSYLCMHHGKTILADPILAP*QPPVGR
Trigger: CCTACCTACCGGAGGTTGCAAAGGAGCAAGGATGGG...ATCTGCAAGTATAGTCTTCCCATGATGCATACAAAGATAACTTACTGATGTCGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262844.10
ENST00000372057.1
ENST00000372059.6
CDS-3UTR CAA 90 bp TTAGTTAAGGCATCACAACTGAAAATGGTTATTTCAACAATGGATGCTGTGGATAGGCCCAGTGACTGGTaGTGCGGCTCAGTGTCAGGA +
Preference number: 5 (lower is better)
Translates to: LVKASQLKMVISTMDAVDRPSDW*CGSVSG
Trigger: TCCTGACACTGAGCCGCACAACCAGTCACTGGGCCT...ATCCACAGCATCCATTGTTGAAATAACCATTTTCAGTTGTGATGCCTTAACTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262844.10
ENST00000372057.1
ENST00000372059.6
CDS-3UTR CAA 90 bp AGTCAGAGGTGGTTACAAAAGTTTGTTTGCTCAGTGCGTCTATGTACCAGCGCAGGTACCTGGCTGACCTaGTTTAAGAACAAGAAAACC +
Preference number: 5 (lower is better)
Translates to: SQRWLQKFVCSVRLCTSAGTWLT*FKNKKT
Trigger: GGTTTTCTTGTTCTTAAACAAGGTCAGCCAGGTACC...TGCGCTGGTACATAGACGCACTGAGCAAACAAACTTTTGTAACCACCTCTGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262844.10
CDS-3UTR CAA 90 bp TCGACATCAGTAAGTTATCTTTGTATGCATCATGGGAAGACTATACTTGCAGATCGAAAGCCCCCTGCTTaGTCTTCTCAGCCCACATCC +
Preference number: 5 (lower is better)
Translates to: STSVSYLCMHHGKTILADRKPPA*SSQPTS
Trigger: GGATGTGGGCTGAGAAGACAAAGCAGGGGGCTTTCG...ATCTGCAAGTATAGTCTTCCCATGATGCATACAAAGATAACTTACTGATGTCGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372057.1
CDS GCA 90 bp AAGAATTTGGAACAGGAAAATGGAGCTTACAGGCTCCCGAATGCCTaGCGAGTCAGTTGCATCAGATTAGGAAGTGATGATCCTAAGAAT +
Preference number: 5 (lower is better)
Translates to: KNLEQENGAYRLPNA*RVSCIRLGSDDPKN
Trigger: ATTCTTAGGATCATCACTTCCTAATCTGATGCAACTGACTCGGCAGGCATTCGGGAGCCTGTAAGCTCCATTTTCCTGTTCCAAATTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372057.1
CDS-3UTR CAA 90 bp TTAGTTAAGGCATCACAACTGAAAATGGTTATTTCAACAATGGATGCTGTGGATCCCATCCTTGCTCCTTaGCAACCTCCGGTAGGTAGG +
Preference number: 5 (lower is better)
Translates to: LVKASQLKMVISTMDAVDPILAP*QPPVGR
Trigger: CCTACCTACCGGAGGTTGCAAAGGAGCAAGGATGGG...ATCCACAGCATCCATTGTTGAAATAACCATTTTCAGTTGTGATGCCTTAACTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262844.10
ENST00000372057.1
ENST00000372059.6
CDS-3UTR CAA 90 bp TTGCTCAGTGCGTCTATGTACCAGCGCAGTTACTGGGTAGAGCAAAATAAAAGGGGTGGTTACAAAAGTTaGTTTGCTCAGTGCGTCTAT +
Preference number: 5 (lower is better)
Translates to: LLSASMYQRSYWVEQNKRGGYKS*FAQCVY
Trigger: ATAGACGCACTGAGCAAACAAACTTTTGTAACCACC...CCTTTTATTTTGCTCTACCCAGTAACTGCGCTGGTACATAGACGCACTGAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000262844.10
CDS-3UTR CAA 90 bp TTAGTTAAGGCATCACAACTGAAAATGGTTATTTCAACAATGGATGCTGTGGATGCTCATGGGATTAGGTaGGCAGGAGCGACTGTCCTC +
Preference number: 5 (lower is better)
Translates to: LVKASQLKMVISTMDAVDAHGIR*AGATVL
Trigger: GAGGACAGTCGCTCCTGCCAACCTAATCCCATGAGC...ATCCACAGCATCCATTGTTGAAATAACCATTTTCAGTTGTGATGCCTTAACTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372057.1
CDS TCA 90 bp ACTTTACTTTGTACAGCTTGCTTCCCCACTAGGCTTCTTATACATTaGCTTGTTGATGCACAGCAAACTCTTTCTAGATGGCCAGGAAGC +
Preference number: 5 (lower is better)
Translates to: TLLCTACFPTRLLIH*LVDAQQTLSRWPGS
Trigger: GCTTCCTGGCCATCTAGAAAGAGTTTGCTGTGCATCAACAAGTCAATGTATAAGAAGCCTAGTGGGGAAGCAAGCTGTACAAAGTAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680410.1
CDS-3UTR CAA 90 bp ATTACAAGTCTCACCATTGTATCACCAAGAACTCATTATGCTGGTGACAGATTCGCTCATCCCTTGTCATaGGGGGAAAACGGCTATCTT +
Preference number: 5 (lower is better)
Translates to: ITSLTIVSPRTHYAGDRFAHPLS*GENGYL
Trigger: AAGATAGCCGTTTTCCCCCAATGACAAGGGATGAGC...GAATCTGTCACCAGCATAATGAGTTCTTGGTGATACAATGGTGAGACTTGTAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262844.10
CDS-3UTR CAA 90 bp TCGACATCAGTAAGTTATCTTTGTATGCATCATGGGAAGACTATACTTGCAGATTATATGGTCCCATCCTaGCTCCTTTGCAACCTCCGG +
Preference number: 5 (lower is better)
Translates to: STSVSYLCMHHGKTILADYMVPS*LLCNLR
Trigger: CCGGAGGTTGCAAAGGAGCAAGGATGGGACCATATA...ATCTGCAAGTATAGTCTTCCCATGATGCATACAAAGATAACTTACTGATGTCGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262844.10
ENST00000372057.1
ENST00000372059.6
CDS-3UTR CAA 90 bp ATTACAAGTCTCACCATTGTATCACCAAGAACTCATTATGCTGGTGACAGATTCTTCCCCCAAGCCATGTaGGGAAATATTGCTGACCTC +
Preference number: 5 (lower is better)
Translates to: ITSLTIVSPRTHYAGDRFFPQAM*GNIADL
Trigger: GAGGTCAGCAATATTTCCCAACATGGCTTGGGGGAA...GAATCTGTCACCAGCATAATGAGTTCTTGGTGATACAATGGTGAGACTTGTAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262844.10
CDS-3UTR CAA 90 bp TTAGTTAAGGCATCACAACTGAAAATGGTTATTTCAACAATGGATGCTGTGGATCAGTCAGAAGGCCACTaGAGGGGTGGGGGACAATTT +
Preference number: 5 (lower is better)
Translates to: LVKASQLKMVISTMDAVDQSEGH*RGGGQF
Trigger: AAATTGTCCCCCACCCCTCAAGTGGCCTTCTGACTG...ATCCACAGCATCCATTGTTGAAATAACCATTTTCAGTTGTGATGCCTTAACTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262844.10
CDS-3UTR CAA 90 bp TTAGTTAAGGCATCACAACTGAAAATGGTTATTTCAACAATGGATGCTGTGGATTATATGGTCCCATCCTaGCTCCTTTGCAACCTCCGG +
Preference number: 5 (lower is better)
Translates to: LVKASQLKMVISTMDAVDYMVPS*LLCNLR
Trigger: CCGGAGGTTGCAAAGGAGCAAGGATGGGACCATATA...ATCCACAGCATCCATTGTTGAAATAACCATTTTCAGTTGTGATGCCTTAACTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262844.10
ENST00000372057.1
ENST00000372059.6
CDS-3UTR CAA 90 bp TCGACATCAGTAAGTTATCTTTGTATGCATCATGGGAAGACTATACTTGCAGATCTAAAGCAATTTGCTTaGCCCCAGTGGCAGGCAGAA +
Preference number: 5 (lower is better)
Translates to: STSVSYLCMHHGKTILADLKQFA*PQWQAE
Trigger: TTCTGCCTGCCACTGGGGCAAAGCAAATTGCTTTAG...ATCTGCAAGTATAGTCTTCCCATGATGCATACAAAGATAACTTACTGATGTCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262844.10
ENST00000372057.1
ENST00000372059.6
CDS-3UTR CAA 90 bp TCGACATCAGTAAGTTATCTTTGTATGCATCATGGGAAGACTATACTTGCAGATGAGGAGAATCCCAAGTaGATTAGGGTCAAGGTGAGG +
Preference number: 5 (lower is better)
Translates to: STSVSYLCMHHGKTILADEENPK*IRVKVR
Trigger: CCTCACCTTGACCCTAATCAACTTGGGATTCTCCTC...ATCTGCAAGTATAGTCTTCCCATGATGCATACAAAGATAACTTACTGATGTCGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372057.1
CDS-3UTR CAA 90 bp TCGACATCAGTAAGTTATCTTTGTATGCATCATGGGAAGACTATACTTGCAGATATGCCCAATGCCATTTaGGAAATGATGATGCTGGCG +
Preference number: 5 (lower is better)
Translates to: STSVSYLCMHHGKTILADMPNAI*EMMMLA
Trigger: CGCCAGCATCATCATTTCCAAAATGGCATTGGGCAT...ATCTGCAAGTATAGTCTTCCCATGATGCATACAAAGATAACTTACTGATGTCGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262844.10
ENST00000372057.1
ENST00000372059.6
CDS-3UTR CAA 90 bp TCGACATCAGTAAGTTATCTTTGTATGCATCATGGGAAGACTATACTTGCAGATATGGGAAGACTATACTaGCAGATGAGCTGGGCTCTA +
Preference number: 5 (lower is better)
Translates to: STSVSYLCMHHGKTILADMGRLY*QMSWAL
Trigger: TAGAGCCCAGCTCATCTGCAAGTATAGTCTTCCCAT...ATCTGCAAGTATAGTCTTCCCATGATGCATACAAAGATAACTTACTGATGTCGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262844.10
ENST00000372057.1
ENST00000372059.6
CDS-3UTR CAA 90 bp ATTACAAGTCTCACCATTGTATCACCAAGAACTCATTATGCTGGTGACAGATTCCCATGTTGGGAAATATaGCTGACCTCGTCCTTTGAA +
Preference number: 5 (lower is better)
Translates to: ITSLTIVSPRTHYAGDRFPCWEI*LTSSFE
Trigger: TTCAAAGGACGAGGTCAGCAATATTTCCCAACATGG...GAATCTGTCACCAGCATAATGAGTTCTTGGTGATACAATGGTGAGACTTGTAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262844.10
CDS-3UTR CAA 90 bp TTAGTTAAGGCATCACAACTGAAAATGGTTATTTCAACAATGGATGCTGTGGATATGCCCAATGCCATTTaGGAAATGATGATGCTGGCG +
Preference number: 5 (lower is better)
Translates to: LVKASQLKMVISTMDAVDMPNAI*EMMMLA
Trigger: CGCCAGCATCATCATTTCCAAAATGGCATTGGGCAT...ATCCACAGCATCCATTGTTGAAATAACCATTTTCAGTTGTGATGCCTTAACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262844.10
ENST00000372057.1
ENST00000372059.6
CDS-3UTR CAA 90 bp TTAGTTAAGGCATCACAACTGAAAATGGTTATTTCAACAATGGATGCTGTGGATATGGGAAGACTATACTaGCAGATGAGCTGGGCTCTA +
Preference number: 5 (lower is better)
Translates to: LVKASQLKMVISTMDAVDMGRLY*QMSWAL
Trigger: TAGAGCCCAGCTCATCTGCAAGTATAGTCTTCCCAT...ATCCACAGCATCCATTGTTGAAATAACCATTTTCAGTTGTGATGCCTTAACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262844.10
ENST00000372057.1
ENST00000372059.6
CDS-3UTR CAA 90 bp TCGACATCAGTAAGTTATCTTTGTATGCATCATGGGAAGACTATACTTGCAGATACTCCAGGTAGCTTTTaGCTCATTACAAGTCTCACC +
Preference number: 5 (lower is better)
Translates to: STSVSYLCMHHGKTILADTPGSF*LITSLT
Trigger: GGTGAGACTTGTAATGAGCAAAAAGCTACCTGGAGT...ATCTGCAAGTATAGTCTTCCCATGATGCATACAAAGATAACTTACTGATGTCGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262844.10
CDS-3UTR CAA 90 bp TCGACATCAGTAAGTTATCTTTGTATGCATCATGGGAAGACTATACTTGCAGATCATCCACGTAATCTTTaGTCTCGACCAATCTTCCAT +
Preference number: 5 (lower is better)
Translates to: STSVSYLCMHHGKTILADHPRNL*SRPIFH
Trigger: ATGGAAGATTGGTCGAGACAAAAGATTACGTGGATG...ATCTGCAAGTATAGTCTTCCCATGATGCATACAAAGATAACTTACTGATGTCGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262844.10
ENST00000372057.1
CDS-3UTR CAA 90 bp ATTACAAGTCTCACCATTGTATCACCAAGAACTCATTATGCTGGTGACAGATTCAACTGGCTACCAAGATaGCATTTCAGGCTAACAATT +
Preference number: 5 (lower is better)
Translates to: ITSLTIVSPRTHYAGDRFNWLPR*HFRLTI
Trigger: AATTGTTAGCCTGAAATGCAATCTTGGTAGCCAGTT...GAATCTGTCACCAGCATAATGAGTTCTTGGTGATACAATGGTGAGACTTGTAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262844.10
CDS-3UTR CAA 90 bp TTAGTTAAGGCATCACAACTGAAAATGGTTATTTCAACAATGGATGCTGTGGATCATCCACGTAATCTTTaGTCTCGACCAATCTTCCAT +
Preference number: 5 (lower is better)
Translates to: LVKASQLKMVISTMDAVDHPRNL*SRPIFH
Trigger: ATGGAAGATTGGTCGAGACAAAAGATTACGTGGATG...ATCCACAGCATCCATTGTTGAAATAACCATTTTCAGTTGTGATGCCTTAACTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262844.10
ENST00000372057.1
CDS-3UTR CAA 90 bp TCGACATCAGTAAGTTATCTTTGTATGCATCATGGGAAGACTATACTTGCAGATTTAGTAATCGGAGCTTaGTATCCTCCTTTCCTCAAT +
Preference number: 5 (lower is better)
Translates to: STSVSYLCMHHGKTILADLVIGA*YPPFLN
Trigger: ATTGAGGAAAGGAGGATACAAAGCTCCGATTACTAA...ATCTGCAAGTATAGTCTTCCCATGATGCATACAAAGATAACTTACTGATGTCGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262844.10
ENST00000372057.1
ENST00000372059.6
CDS-3UTR CAA 90 bp ATTACAAGTCTCACCATTGTATCACCAAGAACTCATTATGCTGGTGACAGATTCATCAGTAAGTTATCTTaGTATGCATCATGGGAAGAC +
Preference number: 5 (lower is better)
Translates to: ITSLTIVSPRTHYAGDRFISKLS*YASWED
Trigger: GTCTTCCCATGATGCATACAAAGATAACTTACTGAT...GAATCTGTCACCAGCATAATGAGTTCTTGGTGATACAATGGTGAGACTTGTAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262844.10
CDS-3UTR CAA 90 bp TCGACATCAGTAAGTTATCTTTGTATGCATCATGGGAAGACTATACTTGCAGATAACTGGCTACCAAGATaGCATTTCAGGCTAACAATT +
Preference number: 5 (lower is better)
Translates to: STSVSYLCMHHGKTILADNWLPR*HFRLTI
Trigger: AATTGTTAGCCTGAAATGCAATCTTGGTAGCCAGTT...ATCTGCAAGTATAGTCTTCCCATGATGCATACAAAGATAACTTACTGATGTCGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262844.10
ENST00000372057.1
ENST00000372059.6
CDS-3UTR CAA 90 bp TTAGTTAAGGCATCACAACTGAAAATGGTTATTTCAACAATGGATGCTGTGGATGGGTCTAGCATTTGTTaGAAGCACACCATTACAGTT +
Preference number: 5 (lower is better)
Translates to: LVKASQLKMVISTMDAVDGSSIC*KHTITV
Trigger: AACTGTAATGGTGTGCTTCAAACAAATGCTAGACCC...ATCCACAGCATCCATTGTTGAAATAACCATTTTCAGTTGTGATGCCTTAACTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262844.10
CDS-3UTR CAA 90 bp ATTACAAGTCTCACCATTGTATCACCAAGAACTCATTATGCTGGTGACAGATTCTTACAAGTCTCACCATaGTATCACCAAGAACTCATT +
Preference number: 5 (lower is better)
Translates to: ITSLTIVSPRTHYAGDRFLQVSP*YHQELI
Trigger: AATGAGTTCTTGGTGATACAATGGTGAGACTTGTAA...GAATCTGTCACCAGCATAATGAGTTCTTGGTGATACAATGGTGAGACTTGTAAT
38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262844.10
CDS-3UTR CAA 90 bp TCGACATCAGTAAGTTATCTTTGTATGCATCATGGGAAGACTATACTTGCAGATATCAGTAAGTTATCTTaGTATGCATCATGGGAAGAC +
Preference number: 5 (lower is better)
Translates to: STSVSYLCMHHGKTILADISKLS*YASWED
Trigger: GTCTTCCCATGATGCATACAAAGATAACTTACTGAT...ATCTGCAAGTATAGTCTTCCCATGATGCATACAAAGATAACTTACTGATGTCGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262844.10
ENST00000372057.1
ENST00000372059.6
CDS-3UTR CAA 90 bp TTAGTTAAGGCATCACAACTGAAAATGGTTATTTCAACAATGGATGCTGTGGATGCACACCATTACAGTTaGTATAACACCCTTTACACT +
Preference number: 5 (lower is better)
Translates to: LVKASQLKMVISTMDAVDAHHYS*YNTLYT
Trigger: AGTGTAAAGGGTGTTATACAAACTGTAATGGTGTGC...ATCCACAGCATCCATTGTTGAAATAACCATTTTCAGTTGTGATGCCTTAACTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262844.10
CDS-3UTR CAA 90 bp TTAGTTAAGGCATCACAACTGAAAATGGTTATTTCAACAATGGATGCTGTGGATAGAAATGGAAGCCTTTaGCTACATACCAAAGCAAAG +
Preference number: 5 (lower is better)
Translates to: LVKASQLKMVISTMDAVDRNGSL*LHTKAK
Trigger: CTTTGCTTTGGTATGTAGCAAAAGGCTTCCATTTCT...ATCCACAGCATCCATTGTTGAAATAACCATTTTCAGTTGTGATGCCTTAACTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262844.10
CDS-3UTR CAA 90 bp TTAGTTAAGGCATCACAACTGAAAATGGTTATTTCAACAATGGATGCTGTGGATGTTACAAAAGTTTGTTaGCTCAGTGCGTCTATGTAC +
Preference number: 5 (lower is better)
Translates to: LVKASQLKMVISTMDAVDVTKVC*LSASMY
Trigger: GTACATAGACGCACTGAGCAAACAAACTTTTGTAAC...ATCCACAGCATCCATTGTTGAAATAACCATTTTCAGTTGTGATGCCTTAACTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262844.10
CDS-3UTR CAA 90 bp TTAGTTAAGGCATCACAACTGAAAATGGTTATTTCAACAATGGATGCTGTGGATCTAAGAATAAGATGTTaGGAAAATCTTGTCCCCCGA +
Preference number: 5 (lower is better)
Translates to: LVKASQLKMVISTMDAVDLRIRC*ENLVPR
Trigger: TCGGGGGACAAGATTTTCCAAACATCTTATTCTTAG...ATCCACAGCATCCATTGTTGAAATAACCATTTTCAGTTGTGATGCCTTAACTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372057.1
CDS CCA 72 bp CCGGCGCCTCCTAGTCCCAGCTCCCCAGCTCGGCACTaGCTCTCTCCGCTGCAGTGGGAGGAGGAGGAGGCG +
Preference number: 6 (lower is better)
Translates to: PAPPSPSSPARH*LSPLQWEEEEA
Trigger: CGCCTCCTCCTCCTCCCACTGCAGCGGAGAGAGCCAGTGCCGAGCTGGGGAGCTGGGACTAGGAGGCGCCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262844.10
ENST00000372059.6
CDS CAA 90 bp GTACAGCCGCTGCCGCTACCTCCTCCGGTTAGACCTCCCAGCCCGTaGAGCCGCGTACCGGCGCCTCCTAGTCCCAGCTCCCCAGCTCGG +
Preference number: 6 (lower is better)
Translates to: VQPLPLPPPVRPPSP*SRVPAPPSPSSPAR
Trigger: CCGAGCTGGGGAGCTGGGACTAGGAGGCGCCGGTACGCGGCTCAACGGGCTGGGAGGTCTAACCGGAGGAGGTAGCGGCAGCGGCTGTAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262844.10
ENST00000372059.6
CDS TCA 72 bp TGCCGCTACCTCCTCCGGTTAGACCTCCCAGCCCGTTaGGCCGCGTACCGGCGCCTCCTAGTCCCAGCTCCC +
Preference number: 6 (lower is better)
Translates to: CRYLLRLDLPAR*AAYRRLLVPAP
Trigger: GGGAGCTGGGACTAGGAGGCGCCGGTACGCGGCTCAACGGGCTGGGAGGTCTAACCGGAGGAGGTAGCGGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262844.10
ENST00000372059.6
CDS CAA 72 bp CTGCCGCTACCTCCTCCGGTTAGACCTCCCAGCCCGTaGAGCCGCGTACCGGCGCCTCCTAGTCCCAGCTCC +
Preference number: 6 (lower is better)
Translates to: LPLPPPVRPPSP*SRVPAPPSPSS
Trigger: GGAGCTGGGACTAGGAGGCGCCGGTACGCGGCTCAACGGGCTGGGAGGTCTAACCGGAGGAGGTAGCGGCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262844.10
ENST00000372059.6
CDS GCA 72 bp CCCCCAGGATGTCTCTCATCCTGCCAGACTGCCTGGTaGCTCCGTGCCCCTTACCGTGAGGGTGCTGGCAGC +
Preference number: 6 (lower is better)
Translates to: PPGCLSSCQTAW*LRAPYREGAGS
Trigger: GCTGCCAGCACCCTCACGGTAAGGGGCACGGAGGCACCAGGCAGTCTGGCAGGATGAGAGACATCCTGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372057.1
CDS CAA 90 bp GTAGGGTCTCCTGGGAAGAGGTCTGCAGAGAGGCCCAGTGACTGGTaGTGCGGCTCAGTGTCAGGAATAATGGTTGTATGGCGGAAGGGG +
Preference number: 6 (lower is better)
Translates to: VGSPGKRSAERPSDW*CGSVSGIMVVWRKG
Trigger: CCCCTTCCGCCATACAACCATTATTCCTGACACTGAGCCGCACAACCAGTCACTGGGCCTCTCTGCAGACCTCTTCCCAGGAGACCCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262844.10
ENST00000372057.1
ENST00000372059.6
ENST00000680410.1
CDS TCA 72 bp AGGGTCTCCTGGGAAGAGGTCTGCAGAGAGGCCCAGTaGCTGGTTGTGCGGCTCAGTGTCAGGAATAATGGT +
Preference number: 6 (lower is better)
Translates to: RVSWEEVCREAQ*LVVRLSVRNNG
Trigger: ACCATTATTCCTGACACTGAGCCGCACAACCAGTCACTGGGCCTCTCTGCAGACCTCTTCCCAGGAGACCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262844.10
ENST00000372057.1
ENST00000372059.6
ENST00000680410.1
CDS CCA 72 bp TGGCCCGGCAAGGTAGTCAGGCTCATGGGATTAGGTTaGCAGGAGCGACTGTCCTCTAAACGATTAGCCCAG +
Preference number: 6 (lower is better)
Translates to: WPGKVVRLMGLG*QERLSSKRLAQ
Trigger: CTGGGCTAATCGTTTAGAGGACAGTCGCTCCTGCCAACCTAATCCCATGAGCCTGACTACCTTGCCGGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372057.1
ENST00000680410.1
CDS CAA 72 bp CCTGGGAAGAGGTCTGCAGAGAGGCCCAGTGACTGGTaGTGCGGCTCAGTGTCAGGAATAATGGTTGTATGG +
Preference number: 6 (lower is better)
Translates to: PGKRSAERPSDW*CGSVSGIMVVW
Trigger: CCATACAACCATTATTCCTGACACTGAGCCGCACAACCAGTCACTGGGCCTCTCTGCAGACCTCTTCCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262844.10
ENST00000372057.1
ENST00000372059.6
ENST00000680410.1
CDS CCA 72 bp TCTCCTGGGAAGAGGTCTGCAGAGAGGCCCAGTGACTaGTTGTGCGGCTCAGTGTCAGGAATAATGGTTGTA +
Preference number: 6 (lower is better)
Translates to: SPGKRSAERPSD*LCGSVSGIMVV
Trigger: TACAACCATTATTCCTGACACTGAGCCGCACAACCAGTCACTGGGCCTCTCTGCAGACCTCTTCCCAGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262844.10
ENST00000372057.1
ENST00000372059.6
ENST00000680410.1
CDS CCA 72 bp TGGTTGTGCGGCTCAGTGTCAGGAATAATGGTTGTATaGCGGAAGGGGATGCCCAATGCCATTTTGGAAATG +
Preference number: 6 (lower is better)
Translates to: WLCGSVSGIMVV*RKGMPNAILEM
Trigger: CATTTCCAAAATGGCATTGGGCATCCCCTTCCGCCATACAACCATTATTCCTGACACTGAGCCGCACAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262844.10
ENST00000372057.1
ENST00000372059.6
ENST00000680410.1
CDS CAA 72 bp ATGGTTGTATGGCGGAAGGGGATGCCCAATGCCATTTaGGAAATGATGATGCTGGCGATGAGCAAGGTATTC +
Preference number: 6 (lower is better)
Translates to: MVVWRKGMPNAI*EMMMLAMSKVF
Trigger: GAATACCTTGCTCATCGCCAGCATCATCATTTCCAAAATGGCATTGGGCATCCCCTTCCGCCATACAACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262844.10
ENST00000372057.1
ENST00000372059.6
ENST00000680410.1
CDS CAA 90 bp TCAGGAATAATGGTTGTATGGCGGAAGGGGATGCCCAATGCCATTTaGGAAATGATGATGCTGGCGATGAGCAAGGTATTCAGCATAGCT +
Preference number: 6 (lower is better)
Translates to: SGIMVVWRKGMPNAI*EMMMLAMSKVFSIA
Trigger: AGCTATGCTGAATACCTTGCTCATCGCCAGCATCATCATTTCCAAAATGGCATTGGGCATCCCCTTCCGCCATACAACCATTATTCCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262844.10
ENST00000372057.1
ENST00000372059.6
ENST00000680410.1
CDS GCA 72 bp AGGAATAATGGTTGTATGGCGGAAGGGGATGCCCAATaGCATTTTGGAAATGATGATGCTGGCGATGAGCAA +
Preference number: 6 (lower is better)
Translates to: RNNGCMAEGDAQ*HFGNDDAGDEQ
Trigger: TTGCTCATCGCCAGCATCATCATTTCCAAAATGGCATTGGGCATCCCCTTCCGCCATACAACCATTATTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262844.10
ENST00000372057.1
ENST00000372059.6
ENST00000680410.1
CDS GCA 72 bp TACTGCATAAAACAGTCAACTGTGCTCTCCCGGCACTaGATGTGGCTTTGGGTAACAATGTGGATTATTAGG +
Preference number: 6 (lower is better)
Translates to: YCIKQSTVLSRH*MWLWVTMWIIR
Trigger: CCTAATAATCCACATTGTTACCCAAAGCCACATGCAGTGCCGGGAGAGCACAGTTGACTGTTTTATGCAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496695.1
CDS CAA 72 bp CAGCTTGCTTCCCCACTAGGCTTCTTATACATTGACTaGTTGATGCACAGCAAACTCTTTCTAGATGGCCAG +
Preference number: 6 (lower is better)
Translates to: QLASPLGFLYID*LMHSKLFLDGQ
Trigger: CTGGCCATCTAGAAAGAGTTTGCTGTGCATCAACAAGTCAATGTATAAGAAGCCTAGTGGGGAAGCAAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680410.1
CDS CAA 90 bp ACCGTCTTCCTTTTCCTTTCTAAGTACTTTGAGGAGAATCCCAAGTaGATTAGGGTCAAGGTGAGGACTCATGGTGAGGTGCAGAAGAAT +
Preference number: 6 (lower is better)
Translates to: TVFLFLSKYFEENPK*IRVKVRTHGEVQKN
Trigger: ATTCTTCTGCACCTCACCATGAGTCCTCACCTTGACCCTAATCAACTTGGGATTCTCCTCAAAGTACTTAGAAAGGAAAAGGAAGACGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372057.1
ENST00000680410.1
CDS CAA 72 bp CTTGCTTCCCCACTAGGCTTCTTATACATTGACTTGTaGATGCACAGCAAACTCTTTCTAGATGGCCAGGAA +
Preference number: 6 (lower is better)
Translates to: LASPLGFLYIDL*MHSKLFLDGQE
Trigger: TTCCTGGCCATCTAGAAAGAGTTTGCTGTGCATCAACAAGTCAATGTATAAGAAGCCTAGTGGGGAAGCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680410.1
CDS TCA 72 bp CATTCCATAGGAATTACTCAAAGATCCACTAACACCTaGAGCAAAGCAGAGAATCTGTTACCACCTTGCAGC +
Preference number: 6 (lower is better)
Translates to: HSIGITQRSTNT*SKAENLLPPCS
Trigger: GCTGCAAGGTGGTAACAGATTCTCTGCTTTGCTTCAGGTGTTAGTGGATCTTTGAGTAATTCCTATGGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496695.1
CDS TCA 72 bp TGTACAGCTTGCTTCCCCACTAGGCTTCTTATACATTaGCTTGTTGATGCACAGCAAACTCTTTCTAGATGG +
Preference number: 6 (lower is better)
Translates to: CTACFPTRLLIH*LVDAQQTLSRW
Trigger: CCATCTAGAAAGAGTTTGCTGTGCATCAACAAGTCAATGTATAAGAAGCCTAGTGGGGAAGCAAGCTGTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680410.1
CDS CAA 72 bp ATGGCAGAAAAAGTACCTATGCATCCACGTAATCTTTaGTCTCGACCAATCTTCCATGTTACAAACAGTGGG +
Preference number: 6 (lower is better)
Translates to: MAEKVPMHPRNL*SRPIFHVTNSG
Trigger: CCCACTGTTTGTAACATGGAAGATTGGTCGAGACAAAAGATTACGTGGATGCATAGGTACTTTTTCTGCCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262844.10
ENST00000372057.1
ENST00000473662.1
ENST00000680410.1
CDS CCA 72 bp TTAATTCAATCTCACTACTTTCTATTACTAGAGAACTaGTCAGCATCTTCTGGCAGGATACTGCATAAAACA +
Preference number: 6 (lower is better)
Translates to: LIQSHYFLLLEN*SASSGRILHKT
Trigger: TGTTTTATGCAGTATCCTGCCAGAAGATGCTGACCAGTTCTCTAGTAATAGAAAGTAGTGAGATTGAATTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496695.1