RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AMER3 (Homo sapiens)

Ensembl gene IDs: ENSG00000178171

Ensembl transcript IDs: ENST00000321420.5, ENST00000423981.1, ENST00000431758.1, ENST00000458606.5

Found 743 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGGCAGCGAGTAGGCCAGACTGGGGCCAGATTGAGGCCGGTTCAGTaGGCCCTCCTAAGGTCGGCTCCCCCACCCGTCTCCCACCCTGAG +
Preference number: 1 (lower is better)
Translates to: GQRVGQTGARLRPVQ*ALLRSAPPPVSHPE
Trigger: CTCAGGGTGGGAGACGGGTGGGGGAGCCGACCTTAGGAGGGCCCACTGAACCGGCCTCAATCTGGCCCCAGTCTGGCCTACTCGCTGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR TCA 90 bp GAGAGGGCCACCGGAGACCAAGCGTCAGGCAGTCAGGAGAGGCACTaGCCAGCGTCCCCTGGTGGGAGGGCCACCCTCAGCTACAGATCC +
Preference number: 1 (lower is better)
Translates to: ERATGDQASGSQERH*PASPGGRATLSYRS
Trigger: GGATCTGTAGCTGAGGGTGGCCCTCCCACCAGGGGACGCTGGTCAGTGCCTCTCCTGACTGCCTGACGCTTGGTCTCCGGTGGCCCTCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR TCA 90 bp ACTTGCCCCCAGCTCGGCTCAGTGATGCTGCTGTGGTCCTGTGTGTaGGTCTTGGGAGGAGGGCTCAGATGTGGCTCCACAGGGGCTCCA +
Preference number: 1 (lower is better)
Translates to: TCPQLGSVMLLWSCV*VLGGGLRCGSTGAP
Trigger: TGGAGCCCCTGTGGAGCCACATCTGAGCCCTCCTCCCAAGACTCACACACAGGACCACAGCAGCATCACTGAGCCGAGCTGGGGGCAAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR GCA 90 bp ACCAGCGTCCCCTGGTGGGAGGGCCACCCTCAGCTACAGATCCTGTaGTGCCTTCTTCTCGAGCCAGGACAGCACAACTCACGCTCCTCT +
Preference number: 1 (lower is better)
Translates to: TSVPWWEGHPQLQIL*CLLLEPGQHNSRSS
Trigger: AGAGGAGCGTGAGTTGTGCTGTCCTGGCTCGAGAAGAAGGCAGCACAGGATCTGTAGCTGAGGGTGGCCCTCCCACCAGGGGACGCTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR GCA 90 bp CGGGCCTGGTCAGAAGCCTTGCTGCACACTTTGGAACCTGTGATGTaGAGCCTGTGTCCTGCTTGCAGCAGGCCTCAGGGAGCCCTGGTG +
Preference number: 1 (lower is better)
Translates to: RAWSEALLHTLEPVM*SLCPACSRPQGALV
Trigger: CACCAGGGCTCCCTGAGGCCTGCTGCAAGCAGGACACAGGCTGCACATCACAGGTTCCAAAGTGTGCAGCAAGGCTTCTGACCAGGCCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR CCA 90 bp GGTTGCAGCTTCGCGCTGTCTTTGGCGGTGGGCTGCCTGAGCTGGTaGGTTCAGGCAAGGATGCCTCCACATGAACATGCTACCCTCTGC +
Preference number: 1 (lower is better)
Translates to: GCSFALSLAVGCLSW*VQARMPPHEHATLC
Trigger: GCAGAGGGTAGCATGTTCATGTGGAGGCATCCTTGCCTGAACCCACCAGCTCAGGCAGCCCACCGCCAAAGACAGCGCGAAGCTGCAACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR GCA 90 bp GAGCAGCTAGGTGGTTGCAGCTTCGCGCTGTCTTTGGCGGTGGGCTaGCTGAGCTGGTGGGTTCAGGCAAGGATGCCTCCACATGAACAT +
Preference number: 1 (lower is better)
Translates to: EQLGGCSFALSLAVG*LSWWVQARMPPHEH
Trigger: ATGTTCATGTGGAGGCATCCTTGCCTGAACCCACCAGCTCAGGCAGCCCACCGCCAAAGACAGCGCGAAGCTGCAACCACCTAGCTGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR CCA 90 bp GCTAATCTTGGAGAATGTGGATGGCCCATCTGTCCCTGCACCTGCTaGCCTGACACTGGCCCAGGACGGACACCTGTCCCTCCTACAGAC +
Preference number: 1 (lower is better)
Translates to: ANLGECGWPICPCTC*PDTGPGRTPVPPTD
Trigger: GTCTGTAGGAGGGACAGGTGTCCGTCCTGGGCCAGTGTCAGGCCAGCAGGTGCAGGGACAGATGGGCCATCCACATTCTCCAAGATTAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR CCA 90 bp AGGGCTCAGATGTGGCTCCACAGGGGCTCCAGATCTGGACGGGCCTaGTCAGAAGCCTTGCTGCACACTTTGGAACCTGTGATGTGCAGC +
Preference number: 1 (lower is better)
Translates to: RAQMWLHRGSRSGRA*SEALLHTLEPVMCS
Trigger: GCTGCACATCACAGGTTCCAAAGTGTGCAGCAAGGCTTCTGACCAGGCCCGTCCAGATCTGGAGCCCCTGTGGAGCCACATCTGAGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR CCA 90 bp TCTTGGGAGGAGGGCTCAGATGTGGCTCCACAGGGGCTCCAGATCTaGACGGGCCTGGTCAGAAGCCTTGCTGCACACTTTGGAACCTGT +
Preference number: 1 (lower is better)
Translates to: SWEEGSDVAPQGLQI*TGLVRSLAAHFGTC
Trigger: ACAGGTTCCAAAGTGTGCAGCAAGGCTTCTGACCAGGCCCGTCCAGATCTGGAGCCCCTGTGGAGCCACATCTGAGCCCTCCTCCCAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR GCA 90 bp GAAGCTAATCTTGGAGAATGTGGATGGCCCATCTGTCCCTGCACCTaGTGGCCTGACACTGGCCCAGGACGGACACCTGTCCCTCCTACA +
Preference number: 1 (lower is better)
Translates to: EANLGECGWPICPCT*WPDTGPGRTPVPPT
Trigger: TGTAGGAGGGACAGGTGTCCGTCCTGGGCCAGTGTCAGGCCAGCAGGTGCAGGGACAGATGGGCCATCCACATTCTCCAAGATTAGCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR GCA 90 bp CTTCATTCTTTCAACAAGGATTTACAGAGCGGCTACTCCCTCAGGTaGAGCACAAAGCCCCAGGCTGGGGTTGAGTCAGGGCAGCCTCCC +
Preference number: 1 (lower is better)
Translates to: LHSFNKDLQSGYSLR*STKPQAGVESGQPP
Trigger: GGGAGGCTGCCCTGACTCAACCCCAGCCTGGGGCTTTGTGCTGCACCTGAGGGAGTAGCCGCTCTGTAAATCCTTGTTGAAAGAATGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR CCA 90 bp ACAGGCTTTTCTTCCACTGCCTTGACATCAGAGCTTCAGGCTCGCTaGCCTTTGGACTCTGGAACTTACACCCATGGCCCTCCTGGGTCC +
Preference number: 1 (lower is better)
Translates to: TGFSSTALTSELQAR*PLDSGTYTHGPPGS
Trigger: GGACCCAGGAGGGCCATGGGTGTAAGTTCCAGAGTCCAAAGGCCAGCGAGCCTGAAGCTCTGATGTCAAGGCAGTGGAAGAAAAGCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR CCA 90 bp TGCCTTCTTCTCGAGCCAGGACAGCACAACTCACGCTCCTCTTGGTaGGAGCTCTGCATGAGATGGGATTTCCCTAGCACTTTGCCTGCG +
Preference number: 1 (lower is better)
Translates to: CLLLEPGQHNSRSSW*ELCMRWDFPSTLPA
Trigger: CGCAGGCAAAGTGCTAGGGAAATCCCATCTCATGCAGAGCTCCCACCAAGAGGAGCGTGAGTTGTGCTGTCCTGGCTCGAGAAGAAGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR CCA 90 bp TGCTGCCTTCTTCTCGAGCCAGGACAGCACAACTCACGCTCCTCTTaGTGGGAGCTCTGCATGAGATGGGATTTCCCTAGCACTTTGCCT +
Preference number: 1 (lower is better)
Translates to: CCLLLEPGQHNSRSS*WELCMRWDFPSTLP
Trigger: AGGCAAAGTGCTAGGGAAATCCCATCTCATGCAGAGCTCCCACCAAGAGGAGCGTGAGTTGTGCTGTCCTGGCTCGAGAAGAAGGCAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR TCA 90 bp ACAACTGCATTGAGGTTGATGCAAGGATCAGGTAAGCGAATCTGGTaGAACTTGCCCCCAGCTCGGCTCAGTGATGCTGCTGTGGTCCTG +
Preference number: 1 (lower is better)
Translates to: TTALRLMQGSGKRIW*NLPPARLSDAAVVL
Trigger: CAGGACCACAGCAGCATCACTGAGCCGAGCTGGGGGCAAGTTTCACCAGATTCGCTTACCTGATCCTTGCATCAACCTCAATGCAGTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR GCA 90 bp ACATCCCAGGCAGACTCATTGGCTCTCTGCTTCCCATTTACAATGTaGAGCTCTTTCTCCCCCTCAGTTTCAAGCCCTAGCCCCTCTCTC +
Preference number: 1 (lower is better)
Translates to: TSQADSLALCFPFTM*SSFSPSVSSPSPSL
Trigger: GAGAGAGGGGCTAGGGCTTGAAACTGAGGGGGAGAAAGAGCTGCACATTGTAAATGGGAAGCAGAGAGCCAATGAGTCTGCCTGGGATGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR GCA 90 bp CGATCTGACAGCGTGGAGGGAGTGGAGTCAAAAGCCTTTGTTACTTaGAGGCAGAGCCGAGGAGAATCCATTGGCTTCTTCCCAAAAAGC +
Preference number: 1 (lower is better)
Translates to: RSDSVEGVESKAFVT*RQSRGESIGFFPKS
Trigger: GCTTTTTGGGAAGAAGCCAATGGATTCTCCTCGGCTCTGCCTGCAAGTAACAAAGGCTTTTGACTCCACTCCCTCCACGCTGTCAGATCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR TCA 90 bp AACCCATTTCATGGCTGCCTGTGGAGCCCAATCCTGGCATCTTGCTaGGGTGTGCTGGTTGAGGTAGAAGCTAATCTTGGAGAATGTGGA +
Preference number: 1 (lower is better)
Translates to: NPFHGCLWSPILASC*GVLVEVEANLGECG
Trigger: TCCACATTCTCCAAGATTAGCTTCTACCTCAACCAGCACACCTCAGCAAGATGCCAGGATTGGGCTCCACAGGCAGCCATGAAATGGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR CCA 90 bp AGGCAGAGCCGAGGAGAATCCATTGGCTTCTTCCCAAAAAGCATTTaGCCATCCATGGCTCTAGTTAGAGAGTGCAAGCGGAGGGAAATC +
Preference number: 1 (lower is better)
Translates to: RQSRGESIGFFPKSI*PSMALVRECKRREI
Trigger: GATTTCCCTCCGCTTGCACTCTCTAACTAGAGCCATGGATGGCCAAATGCTTTTTGGGAAGAAGCCAATGGATTCTCCTCGGCTCTGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR CCA 90 bp CAGGGAGAACAAATAAAGAAGGCAAACTGGTCTCTCTCTCAGAGCTaGGACAGGCTTTTCTTCCACTGCCTTGACATCAGAGCTTCAGGC +
Preference number: 1 (lower is better)
Translates to: QGEQIKKANWSLSQS*DRLFFHCLDIRASG
Trigger: GCCTGAAGCTCTGATGTCAAGGCAGTGGAAGAAAAGCCTGTCCCAGCTCTGAGAGAGAGACCAGTTTGCCTTCTTTATTTGTTCTCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR CCA 90 bp ATTCAATCTGCTGAGGCCCAGGGAGAACAAATAAAGAAGGCAAACTaGTCTCTCTCTCAGAGCTGGGACAGGCTTTTCTTCCACTGCCTT +
Preference number: 1 (lower is better)
Translates to: IQSAEAQGEQIKKAN*SLSQSWDRLFFHCL
Trigger: AAGGCAGTGGAAGAAAAGCCTGTCCCAGCTCTGAGAGAGAGACCAGTTTGCCTTCTTTATTTGTTCTCCCTGGGCCTCAGCAGATTGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR CCA 90 bp CATTTTGGGTGTGAACTCGACTGGGTTAAGGGATACCTAGAGACCTaGGAGATCATTATTCTGGGCATGTCTGTGAGGTGTTTCCAGAGA +
Preference number: 1 (lower is better)
Translates to: HFGCELDWVKGYLET*EIIILGMSVRCFQR
Trigger: TCTCTGGAAACACCTCACAGACATGCCCAGAATAATGATCTCCCAGGTCTCTAGGTATCCCTTAACCCAGTCGAGTTCACACCCAAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR TCA 90 bp CTAGTTAGAGAGTGCAAGCGGAGGGAAATCATTGTTTGTAGGGGATaGTTCGTGACAAATAATCTAGCACTGCCCATCAACAAGGGTGGG +
Preference number: 1 (lower is better)
Translates to: LVRECKRREIIVCRG*FVTNNLALPINKGG
Trigger: CCCACCCTTGTTGATGGGCAGTGCTAGATTATTTGTCACGAATCATCCCCTACAAACAATGATTTCCCTCCGCTTGCACTCTCTAACTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR GCA 90 bp TGCAAGTATAAAGCGAGGTGCACACAATTACCAAGCATAGTGACATaGATGTATACATTTCCCATTTTGACCTATTTCTTCATGAATATA +
Preference number: 1 (lower is better)
Translates to: CKYKARCTQLPSIVT*MYTFPILTYFFMNI
Trigger: TATATTCATGAAGAAATAGGTCAAAATGGGAAATGTATACATGCATGTCACTATGCTTGGTAATTGTGTGCACCTCGCTTTATACTTGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR CAA 90 bp CCCCTGCATGAGGAGCAGCTAGGTGGTTGCAGCTTCGCGCTGTCTTaGGCGGTGGGCTGCCTGAGCTGGTGGGTTCAGGCAAGGATGCCT +
Preference number: 2 (lower is better)
Translates to: PLHEEQLGGCSFALS*AVGCLSWWVQARMP
Trigger: AGGCATCCTTGCCTGAACCCACCAGCTCAGGCAGCCCACCGCCAAAGACAGCGCGAAGCTGCAACCACCTAGCTGCTCCTCATGCAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR-3UTR CCA 90 bp CCTCAGCTACAGATCCTGTGCTGCCTTCTTCTCGAGCCAGGACAGCACAACTCAGGGTCCCGCCAGCCCTaGCAGGGCGCACAGGGATGC +
Preference number: 2 (lower is better)
Translates to: PQLQILCCLLLEPGQHNSGSRQP*QGAQGC
Trigger: GCATCCCTGTGCGCCCTGCCAGGGCTGGCGGGACCC...TGAGTTGTGCTGTCCTGGCTCGAGAAGAAGGCAGCACAGGATCTGTAGCTGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR-3UTR CCA 90 bp TCCTGTGCTGCCTTCTTCTCGAGCCAGGACAGCACAACTCACGCTCCTCTTGGTGCCCATCAACAAGGGTaGGAGGGTCCCGCCAGCCCT +
Preference number: 2 (lower is better)
Translates to: SCAAFFSSQDSTTHAPLGAHQQG*EGPASP
Trigger: AGGGCTGGCGGGACCCTCCCACCCTTGTTGATGGGC...ACCAAGAGGAGCGTGAGTTGTGCTGTCCTGGCTCGAGAAGAAGGCAGCACAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR-3UTR TCA 90 bp ATCTGGACGGGCCTGGTCAGAAGCCTTGCTGCACACTTTGGAACCTGTGATGTGAGACTGGGGCCAGATTaGGGCCGGTTCAGTGGGCCC +
Preference number: 2 (lower is better)
Translates to: IWTGLVRSLAAHFGTCDVRLGPD*GRFSGP
Trigger: GGGCCCACTGAACCGGCCTCAATCTGGCCCCAGTCT...CACATCACAGGTTCCAAAGTGTGCAGCAAGGCTTCTGACCAGGCCCGTCCAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR-3UTR TCA 90 bp CCAGCCACCTTCTCCCTTCATGGTTCTGAATGTCGGGGTGCTGCACATGTGTTGAGACTGGGGCCAGATTaGGGCCGGTTCAGTGGGCCC +
Preference number: 2 (lower is better)
Translates to: PATFSLHGSECRGAAHVLRLGPD*GRFSGP
Trigger: GGGCCCACTGAACCGGCCTCAATCTGGCCCCAGTCT...CAACACATGTGCAGCACCCCGACATTCAGAACCATGAAGGGAGAAGGTGGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR-3UTR TCA 90 bp TCCTGTGCTGCCTTCTTCTCGAGCCAGGACAGCACAACTCACGCTCCTCTTGGTGCGCACAGGGATGCATaGTGCTGGCTGGCTCACTCC +
Preference number: 2 (lower is better)
Translates to: SCAAFFSSQDSTTHAPLGAHRDA*CWLAHS
Trigger: GGAGTGAGCCAGCCAGCATCATGCATCCCTGTGCGC...ACCAAGAGGAGCGTGAGTTGTGCTGTCCTGGCTCGAGAAGAAGGCAGCACAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR-3UTR GCA 90 bp CTTCGCGCTGTCTTTGGCGGTGGGCTGCCTGAGCTGGTGGGTTCAGGCAAGGATGAACATGCTACCCTCTaGATGCCTGAGTCCTGCCAC +
Preference number: 2 (lower is better)
Translates to: LRAVFGGGLPELVGSGKDEHATL*MPESCH
Trigger: GTGGCAGGACTCAGGCATGCAGAGGGTAGCATGTTC...ATCCTTGCCTGAACCCACCAGCTCAGGCAGCCCACCGCCAAAGACAGCGCGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR-3UTR CCA 90 bp TCCTGTGCTGCCTTCTTCTCGAGCCAGGACAGCACAACTCACGCTCCTCTTGGTGCGAGTAGGCCAGACTaGGGCCAGATTGAGGCCGGT +
Preference number: 2 (lower is better)
Translates to: SCAAFFSSQDSTTHAPLGASRPD*GQIEAG
Trigger: ACCGGCCTCAATCTGGCCCCAGTCTGGCCTACTCGC...ACCAAGAGGAGCGTGAGTTGTGCTGTCCTGGCTCGAGAAGAAGGCAGCACAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR-3UTR CCA 90 bp ATCTGGACGGGCCTGGTCAGAAGCCTTGCTGCACACTTTGGAACCTGTGATGTGGCCCATCAACAAGGGTaGGAGGGTCCCGCCAGCCCT +
Preference number: 2 (lower is better)
Translates to: IWTGLVRSLAAHFGTCDVAHQQG*EGPASP
Trigger: AGGGCTGGCGGGACCCTCCCACCCTTGTTGATGGGC...CACATCACAGGTTCCAAAGTGTGCAGCAAGGCTTCTGACCAGGCCCGTCCAGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR-3UTR CCA 90 bp ATCTGGACGGGCCTGGTCAGAAGCCTTGCTGCACACTTTGGAACCTGTGATGTGACCAGCGTCCCCTGGTaGGAGGGCCACCCTCAGCTA +
Preference number: 2 (lower is better)
Translates to: IWTGLVRSLAAHFGTCDVTSVPW*EGHPQL
Trigger: TAGCTGAGGGTGGCCCTCCCACCAGGGGACGCTGGT...CACATCACAGGTTCCAAAGTGTGCAGCAAGGCTTCTGACCAGGCCCGTCCAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR-3UTR TCA 90 bp GGACGCCCTTCAGGCCCTCAGCATGTTGTAGCCACCTGTCCTGGGGCAGCGAGTCAGCATTCAATCTGCTaGGGCCCAGGGAGAACAAAT +
Preference number: 2 (lower is better)
Translates to: GRPSGPQHVVATCPGAASQHSIC*GPGRTN
Trigger: ATTTGTTCTCCCTGGGCCTCAGCAGATTGAATGCTG...ACTCGCTGCCCCAGGACAGGTGGCTACAACATGCTGAGGGCCTGAAGGGCGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR-3UTR GCA 90 bp GGACGCCCTTCAGGCCCTCAGCATGTTGTAGCCACCTGTCCTGGGGCAGCGAGTGGGTTCAGGCAAGGATaGCTCCACATGAACATGCTA +
Preference number: 2 (lower is better)
Translates to: GRPSGPQHVVATCPGAASGFRQG*LHMNML
Trigger: TAGCATGTTCATGTGGAGGCATCCTTGCCTGAACCC...ACTCGCTGCCCCAGGACAGGTGGCTACAACATGCTGAGGGCCTGAAGGGCGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR-3UTR TCA 90 bp CCTCAGCTACAGATCCTGTGCTGCCTTCTTCTCGAGCCAGGACAGCACAACTCATCTCCAGCCCCTGCATaGGGAGCAGCTAGGTGGTTG +
Preference number: 2 (lower is better)
Translates to: PQLQILCCLLLEPGQHNSSPAPA*GAARWL
Trigger: CAACCACCTAGCTGCTCCTCATGCAGGGGCTGGAGA...TGAGTTGTGCTGTCCTGGCTCGAGAAGAAGGCAGCACAGGATCTGTAGCTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR-3UTR GCA 90 bp GACAGCGTGGAGGGAGTGGAGTCAAAAGCCTTTGTTACTTGCAGGCAGAGCCGATCTTTGGCGGTGGGCTaGCTGAGCTGGTGGGTTCAG +
Preference number: 2 (lower is better)
Translates to: DSVEGVESKAFVTCRQSRSLAVG*LSWWVQ
Trigger: CTGAACCCACCAGCTCAGGCAGCCCACCGCCAAAGA...TCGGCTCTGCCTGCAAGTAACAAAGGCTTTTGACTCCACTCCCTCCACGCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR-3UTR CCA 90 bp ATCTGGACGGGCCTGGTCAGAAGCCTTGCTGCACACTTTGGAACCTGTGATGTGGTGGGCTGCCTGAGCTaGTGGGTTCAGGCAAGGATG +
Preference number: 2 (lower is better)
Translates to: IWTGLVRSLAAHFGTCDVVGCLS*WVQARM
Trigger: CATCCTTGCCTGAACCCACCAGCTCAGGCAGCCCAC...CACATCACAGGTTCCAAAGTGTGCAGCAAGGCTTCTGACCAGGCCCGTCCAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR-3UTR CCA 90 bp GACAGCGTGGAGGGAGTGGAGTCAAAAGCCTTTGTTACTTGCAGGCAGAGCCGATTGAGGCCGGTTCAGTaGGCCCTCCTAAGGTCGGCT +
Preference number: 2 (lower is better)
Translates to: DSVEGVESKAFVTCRQSRLRPVQ*ALLRSA
Trigger: AGCCGACCTTAGGAGGGCCCACTGAACCGGCCTCAA...TCGGCTCTGCCTGCAAGTAACAAAGGCTTTTGACTCCACTCCCTCCACGCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR-3UTR GCA 90 bp GCTGAGGCCCAGGGAGAACAAATAAAGAAGGCAAACTGGTCTCTCTCTCAGAGCCGTCCTGAGCCACCCTaGCGGCATCCCAGGTTGACT +
Preference number: 2 (lower is better)
Translates to: AEAQGEQIKKANWSLSQSRPEPP*RHPRLT
Trigger: AGTCAACCTGGGATGCCGGCAGGGTGGCTCAGGACG...GCTCTGAGAGAGAGACCAGTTTGCCTTCTTTATTTGTTCTCCCTGGGCCTCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR-3UTR GCA 90 bp GGACGCCCTTCAGGCCCTCAGCATGTTGTAGCCACCTGTCCTGGGGCAGCGAGTAGGCTTTTCTTCCACTaGCTTGACATCAGAGCTTCA +
Preference number: 2 (lower is better)
Translates to: GRPSGPQHVVATCPGAASRLFFH*LDIRAS
Trigger: TGAAGCTCTGATGTCAAGGCAGTGGAAGAAAAGCCT...ACTCGCTGCCCCAGGACAGGTGGCTACAACATGCTGAGGGCCTGAAGGGCGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR-3UTR GCA 90 bp CCTCAGCTACAGATCCTGTGCTGCCTTCTTCTCGAGCCAGGACAGCACAACTCACCAAGACTGTGCCACTaGACTCCCATTCCCACCTGG +
Preference number: 2 (lower is better)
Translates to: PQLQILCCLLLEPGQHNSPRLCH*TPIPTW
Trigger: CCAGGTGGGAATGGGAGTGCAGTGGCACAGTCTTGG...TGAGTTGTGCTGTCCTGGCTCGAGAAGAAGGCAGCACAGGATCTGTAGCTGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR-3UTR CCA 90 bp TCCTGTGCTGCCTTCTTCTCGAGCCAGGACAGCACAACTCACGCTCCTCTTGGTGGCGATCTGACAGCGTaGAGGGAGTGGAGTCAAAAG +
Preference number: 2 (lower is better)
Translates to: SCAAFFSSQDSTTHAPLGGDLTA*REWSQK
Trigger: CTTTTGACTCCACTCCCTCCACGCTGTCAGATCGCC...ACCAAGAGGAGCGTGAGTTGTGCTGTCCTGGCTCGAGAAGAAGGCAGCACAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR-3UTR TCA 90 bp AAGGGATACCTAGAGACCTGGGAGATCATTATTCTGGGCATGTCTGTGAGGTGTTGGCGGTGGGCTGCCTaGGCTGGTGGGTTCAGGCAA +
Preference number: 2 (lower is better)
Translates to: KGYLETWEIIILGMSVRCWRWAA*AGGFRQ
Trigger: TTGCCTGAACCCACCAGCTCAGGCAGCCCACCGCCA...ACACCTCACAGACATGCCCAGAATAATGATCTCCCAGGTCTCTAGGTATCCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR-3UTR TCA 90 bp GGACGCCCTTCAGGCCCTCAGCATGTTGTAGCCACCTGTCCTGGGGCAGCGAGTACTGGTCCCCAACATTaGAATACTGAAAGACGCAAA +
Preference number: 2 (lower is better)
Translates to: GRPSGPQHVVATCPGAASTGPQH*NTERRK
Trigger: TTTGCGTCTTTCAGTATTTCAATGTTGGGGACCAGT...ACTCGCTGCCCCAGGACAGGTGGCTACAACATGCTGAGGGCCTGAAGGGCGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR-3UTR TCA 90 bp GACAGCGTGGAGGGAGTGGAGTCAAAAGCCTTTGTTACTTGCAGGCAGAGCCGAGTAATACAATGTTCCTaGGGGGACGCCCTTCAGGCC +
Preference number: 2 (lower is better)
Translates to: DSVEGVESKAFVTCRQSRVIQCS*GDALQA
Trigger: GGCCTGAAGGGCGTCCCCTCAGGAACATTGTATTAC...TCGGCTCTGCCTGCAAGTAACAAAGGCTTTTGACTCCACTCCCTCCACGCTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR-3UTR TCA 90 bp CCTCAGCTACAGATCCTGTGCTGCCTTCTTCTCGAGCCAGGACAGCACAACTCAACTTTGCCTGCGACCTaGCTGACCCCTTTTCCTGTG +
Preference number: 2 (lower is better)
Translates to: PQLQILCCLLLEPGQHNSTLPAT*LTPFPV
Trigger: CACAGGAAAAGGGGTCAGTCAGGTCGCAGGCAAAGT...TGAGTTGTGCTGTCCTGGCTCGAGAAGAAGGCAGCACAGGATCTGTAGCTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR-3UTR GCA 90 bp CTAGGTGTGGAAGATCCACCCTCAATGTTGGTGGGCAGCATTCAATCTGCTGAGATGCTACCCTCTGCATaGCTGAGTCCTGCCACCCCC +
Preference number: 2 (lower is better)
Translates to: LGVEDPPSMLVGSIQSAEMLPSA*LSPATP
Trigger: GGGGGTGGCAGGACTCAGGCATGCAGAGGGTAGCAT...CTCAGCAGATTGAATGCTGCCCACCAACATTGAGGGTGGATCTTCCACACCTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR-3UTR CCA 90 bp GCTGAGGCCCAGGGAGAACAAATAAAGAAGGCAAACTGGTCTCTCTCTCAGAGCGTGGGCTGCCTGAGCTaGTGGGTTCAGGCAAGGATG +
Preference number: 2 (lower is better)
Translates to: AEAQGEQIKKANWSLSQSVGCLS*WVQARM
Trigger: CATCCTTGCCTGAACCCACCAGCTCAGGCAGCCCAC...GCTCTGAGAGAGAGACCAGTTTGCCTTCTTTATTTGTTCTCCCTGGGCCTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR-3UTR CCA 90 bp TCCTGTGCTGCCTTCTTCTCGAGCCAGGACAGCACAACTCACGCTCCTCTTGGTTTTCCTGAAGGGGAATaGCGATCTGACAGCGTGGAG +
Preference number: 2 (lower is better)
Translates to: SCAAFFSSQDSTTHAPLGFPEGE*RSDSVE
Trigger: CTCCACGCTGTCAGATCGCCATTCCCCTTCAGGAAA...ACCAAGAGGAGCGTGAGTTGTGCTGTCCTGGCTCGAGAAGAAGGCAGCACAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR-3UTR TCA 90 bp TCCTGTGCTGCCTTCTTCTCGAGCCAGGACAGCACAACTCACGCTCCTCTTGGTAAGGATGCCTCCACATaGACATGCTACCCTCTGCAT +
Preference number: 2 (lower is better)
Translates to: SCAAFFSSQDSTTHAPLGKDAST*TCYPLH
Trigger: ATGCAGAGGGTAGCATGTTCATGTGGAGGCATCCTT...ACCAAGAGGAGCGTGAGTTGTGCTGTCCTGGCTCGAGAAGAAGGCAGCACAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR-3UTR TCA 90 bp CCTCAGCTACAGATCCTGTGCTGCCTTCTTCTCGAGCCAGGACAGCACAACTCACCCCTTTTCCTGTGCTaGTCTTTCCTCCAGAAACCC +
Preference number: 2 (lower is better)
Translates to: PQLQILCCLLLEPGQHNSPLFLC*SFLQKP
Trigger: GGGTTTCTGGAGGAAAGATCAGCACAGGAAAAGGGG...TGAGTTGTGCTGTCCTGGCTCGAGAAGAAGGCAGCACAGGATCTGTAGCTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR-3UTR GCA 90 bp CTTGGGACTATGGCATTTGGGATTGCGTCTTTTGGGATTCACACACATCCCAGGTCTTTGGCGGTGGGCTaGCTGAGCTGGTGGGTTCAG +
Preference number: 2 (lower is better)
Translates to: LGTMAFGIASFGIHTHPRSLAVG*LSWWVQ
Trigger: CTGAACCCACCAGCTCAGGCAGCCCACCGCCAAAGA...CCTGGGATGTGTGTGAATCCCAAAAGACGCAATCCCAAATGCCATAGTCCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR-3UTR GCA 90 bp ATCTGGACGGGCCTGGTCAGAAGCCTTGCTGCACACTTTGGAACCTGTGATGTGCTACAGATCCTGTGCTaGCTTCTTCTCGAGCCAGGA +
Preference number: 2 (lower is better)
Translates to: IWTGLVRSLAAHFGTCDVLQILC*LLLEPG
Trigger: TCCTGGCTCGAGAAGAAGGCAGCACAGGATCTGTAG...CACATCACAGGTTCCAAAGTGTGCAGCAAGGCTTCTGACCAGGCCCGTCCAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR-3UTR CCA 90 bp ATCTGGACGGGCCTGGTCAGAAGCCTTGCTGCACACTTTGGAACCTGTGATGTGATGCATGATGCTGGCTaGCTCACTCCTGTCATCCAG +
Preference number: 2 (lower is better)
Translates to: IWTGLVRSLAAHFGTCDVMHDAG*LTPVIQ
Trigger: CTGGATGACAGGAGTGAGCCAGCCAGCATCATGCAT...CACATCACAGGTTCCAAAGTGTGCAGCAAGGCTTCTGACCAGGCCCGTCCAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR-3UTR CCA 90 bp ATCTGGACGGGCCTGGTCAGAAGCCTTGCTGCACACTTTGGAACCTGTGATGTGTTTCCTGAAGGGGAATaGCGATCTGACAGCGTGGAG +
Preference number: 2 (lower is better)
Translates to: IWTGLVRSLAAHFGTCDVFPEGE*RSDSVE
Trigger: CTCCACGCTGTCAGATCGCCATTCCCCTTCAGGAAA...CACATCACAGGTTCCAAAGTGTGCAGCAAGGCTTCTGACCAGGCCCGTCCAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR-3UTR CCA 90 bp TCCTGTGCTGCCTTCTTCTCGAGCCAGGACAGCACAACTCACGCTCCTCTTGGTTGTGTTGTGACATTTTaGGGAGTGAGGTCCACAGCC +
Preference number: 2 (lower is better)
Translates to: SCAAFFSSQDSTTHAPLGCVVTF*GVRSTA
Trigger: GGCTGTGGACCTCACTCCCCAAAATGTCACAACACA...ACCAAGAGGAGCGTGAGTTGTGCTGTCCTGGCTCGAGAAGAAGGCAGCACAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR-3UTR CCA 90 bp CCTCAGCTACAGATCCTGTGCTGCCTTCTTCTCGAGCCAGGACAGCACAACTCATTTCATGGCTGCCTGTaGAGCCCAATCCTGGCATCT +
Preference number: 2 (lower is better)
Translates to: PQLQILCCLLLEPGQHNSFHGCL*SPILAS
Trigger: AGATGCCAGGATTGGGCTCCACAGGCAGCCATGAAA...TGAGTTGTGCTGTCCTGGCTCGAGAAGAAGGCAGCACAGGATCTGTAGCTGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR-3UTR CCA 90 bp TCCTGTGCTGCCTTCTTCTCGAGCCAGGACAGCACAACTCACGCTCCTCTTGGTCAGAAACCCATTTCATaGCTGCCTGTGGAGCCCAAT +
Preference number: 2 (lower is better)
Translates to: SCAAFFSSQDSTTHAPLGQKPIS*LPVEPN
Trigger: ATTGGGCTCCACAGGCAGCCATGAAATGGGTTTCTG...ACCAAGAGGAGCGTGAGTTGTGCTGTCCTGGCTCGAGAAGAAGGCAGCACAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR-3UTR TCA 90 bp GACAGCGTGGAGGGAGTGGAGTCAAAAGCCTTTGTTACTTGCAGGCAGAGCCGACAGCATTCAATCTGCTaGGGCCCAGGGAGAACAAAT +
Preference number: 2 (lower is better)
Translates to: DSVEGVESKAFVTCRQSRQHSIC*GPGRTN
Trigger: ATTTGTTCTCCCTGGGCCTCAGCAGATTGAATGCTG...TCGGCTCTGCCTGCAAGTAACAAAGGCTTTTGACTCCACTCCCTCCACGCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR-3UTR GCA 90 bp GCTGAGGCCCAGGGAGAACAAATAAAGAAGGCAAACTGGTCTCTCTCTCAGAGCGAACATGCTACCCTCTaGATGCCTGAGTCCTGCCAC +
Preference number: 2 (lower is better)
Translates to: AEAQGEQIKKANWSLSQSEHATL*MPESCH
Trigger: GTGGCAGGACTCAGGCATGCAGAGGGTAGCATGTTC...GCTCTGAGAGAGAGACCAGTTTGCCTTCTTTATTTGTTCTCCCTGGGCCTCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR-3UTR GCA 90 bp ATCTGGACGGGCCTGGTCAGAAGCCTTGCTGCACACTTTGGAACCTGTGATGTGGGGTTCAGGCAAGGATaGCTCCACATGAACATGCTA +
Preference number: 2 (lower is better)
Translates to: IWTGLVRSLAAHFGTCDVGFRQG*LHMNML
Trigger: TAGCATGTTCATGTGGAGGCATCCTTGCCTGAACCC...CACATCACAGGTTCCAAAGTGTGCAGCAAGGCTTCTGACCAGGCCCGTCCAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR-3UTR GCA 90 bp GGACGCCCTTCAGGCCCTCAGCATGTTGTAGCCACCTGTCCTGGGGCAGCGAGTCCAAGCATAGTGACATaGATGTATACATTTCCCATT +
Preference number: 2 (lower is better)
Translates to: GRPSGPQHVVATCPGAASPSIVT*MYTFPI
Trigger: AATGGGAAATGTATACATGCATGTCACTATGCTTGG...ACTCGCTGCCCCAGGACAGGTGGCTACAACATGCTGAGGGCCTGAAGGGCGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR-3UTR GCA 90 bp CCTCAGCTACAGATCCTGTGCTGCCTTCTTCTCGAGCCAGGACAGCACAACTCAGTGGAGCTACTGCCTTaGTTGGGGCTTTATTTGGAG +
Preference number: 2 (lower is better)
Translates to: PQLQILCCLLLEPGQHNSVELLP*LGLYLE
Trigger: CTCCAAATAAAGCCCCAAGCAAGGCAGTAGCTCCAC...TGAGTTGTGCTGTCCTGGCTCGAGAAGAAGGCAGCACAGGATCTGTAGCTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR-3UTR CCA 90 bp TCCTGTGCTGCCTTCTTCTCGAGCCAGGACAGCACAACTCACGCTCCTCTTGGTTGGGATTGCGTCTTTTaGGATTCACACACATCCCAG +
Preference number: 2 (lower is better)
Translates to: SCAAFFSSQDSTTHAPLGWDCVF*DSHTSQ
Trigger: CTGGGATGTGTGTGAATCCCAAAAGACGCAATCCCA...ACCAAGAGGAGCGTGAGTTGTGCTGTCCTGGCTCGAGAAGAAGGCAGCACAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR-3UTR CCA 90 bp ATCTGGACGGGCCTGGTCAGAAGCCTTGCTGCACACTTTGGAACCTGTGATGTGTCTCTCTCTCAGAGCTaGGACAGGCTTTTCTTCCAC +
Preference number: 2 (lower is better)
Translates to: IWTGLVRSLAAHFGTCDVSLSQS*DRLFFH
Trigger: GTGGAAGAAAAGCCTGTCCCAGCTCTGAGAGAGAGA...CACATCACAGGTTCCAAAGTGTGCAGCAAGGCTTCTGACCAGGCCCGTCCAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR-3UTR CCA 90 bp TCCTGTGCTGCCTTCTTCTCGAGCCAGGACAGCACAACTCACGCTCCTCTTGGTGGATACCTAGAGACCTaGGAGATCATTATTCTGGGC +
Preference number: 2 (lower is better)
Translates to: SCAAFFSSQDSTTHAPLGGYLET*EIIILG
Trigger: GCCCAGAATAATGATCTCCCAGGTCTCTAGGTATCC...ACCAAGAGGAGCGTGAGTTGTGCTGTCCTGGCTCGAGAAGAAGGCAGCACAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR-3UTR CCA 90 bp TCCTGTGCTGCCTTCTTCTCGAGCCAGGACAGCACAACTCACGCTCCTCTTGGTTGTCATCCAGCACTGTaGGAGGCTGAGATTTTGAGA +
Preference number: 2 (lower is better)
Translates to: SCAAFFSSQDSTTHAPLGCHPAL*EAEILR
Trigger: TCTCAAAATCTCAGCCTCCCACAGTGCTGGATGACA...ACCAAGAGGAGCGTGAGTTGTGCTGTCCTGGCTCGAGAAGAAGGCAGCACAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR-3UTR CCA 90 bp TCCTGTGCTGCCTTCTTCTCGAGCCAGGACAGCACAACTCACGCTCCTCTTGGTACAGCGTGGAGGGAGTaGAGTCAAAAGCCTTTGTTA +
Preference number: 2 (lower is better)
Translates to: SCAAFFSSQDSTTHAPLGTAWRE*SQKPLL
Trigger: TAACAAAGGCTTTTGACTCCACTCCCTCCACGCTGT...ACCAAGAGGAGCGTGAGTTGTGCTGTCCTGGCTCGAGAAGAAGGCAGCACAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR-3UTR CCA 90 bp CCTCAGCTACAGATCCTGTGCTGCCTTCTTCTCGAGCCAGGACAGCACAACTCATGTGTTGTGACATTTTaGGGAGTGAGGTCCACAGCC +
Preference number: 2 (lower is better)
Translates to: PQLQILCCLLLEPGQHNSCVVTF*GVRSTA
Trigger: GGCTGTGGACCTCACTCCCCAAAATGTCACAACACA...TGAGTTGTGCTGTCCTGGCTCGAGAAGAAGGCAGCACAGGATCTGTAGCTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR-3UTR CCA 90 bp TTGACACTTCATTCTTTCAACAAGGATTTACAGAGCGGCTACTCCCTCAGGTGCTGTCCCTGCACCTGCTaGCCTGACACTGGCCCAGGA +
Preference number: 2 (lower is better)
Translates to: LTLHSFNKDLQSGYSLRCCPCTC*PDTGPG
Trigger: TCCTGGGCCAGTGTCAGGCCAGCAGGTGCAGGGACA...GCACCTGAGGGAGTAGCCGCTCTGTAAATCCTTGTTGAAAGAATGAAGTGTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR-3UTR GCA 90 bp CTTGGGACTATGGCATTTGGGATTGCGTCTTTTGGGATTCACACACATCCCAGGGAGCAGCTAGGTGGTTaGAGCTTCGCGCTGTCTTTG +
Preference number: 2 (lower is better)
Translates to: LGTMAFGIASFGIHTHPREQLGG*SFALSL
Trigger: CAAAGACAGCGCGAAGCTGCAACCACCTAGCTGCTC...CCTGGGATGTGTGTGAATCCCAAAAGACGCAATCCCAAATGCCATAGTCCCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR-3UTR GCA 90 bp CCAGCCACCTTCTCCCTTCATGGTTCTGAATGTCGGGGTGCTGCACATGTGTTGAGAGATGAAAGTTCTTaGCATCTCCGCTCTTTGGGC +
Preference number: 2 (lower is better)
Translates to: PATFSLHGSECRGAAHVLRDESS*HLRSLG
Trigger: GCCCAAAGAGCGGAGATGGCAAGAACTTTCATCTCT...CAACACATGTGCAGCACCCCGACATTCAGAACCATGAAGGGAGAAGGTGGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR-3UTR GCA 90 bp CCTCAGCTACAGATCCTGTGCTGCCTTCTTCTCGAGCCAGGACAGCACAACTCAAGAGATGAAAGTTCTTaGCATCTCCGCTCTTTGGGC +
Preference number: 2 (lower is better)
Translates to: PQLQILCCLLLEPGQHNSRDESS*HLRSLG
Trigger: GCCCAAAGAGCGGAGATGGCAAGAACTTTCATCTCT...TGAGTTGTGCTGTCCTGGCTCGAGAAGAAGGCAGCACAGGATCTGTAGCTGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR-3UTR CCA 90 bp ATCTGGACGGGCCTGGTCAGAAGCCTTGCTGCACACTTTGGAACCTGTGATGTGTGGGATTGCGTCTTTTaGGATTCACACACATCCCAG +
Preference number: 2 (lower is better)
Translates to: IWTGLVRSLAAHFGTCDVWDCVF*DSHTSQ
Trigger: CTGGGATGTGTGTGAATCCCAAAAGACGCAATCCCA...CACATCACAGGTTCCAAAGTGTGCAGCAAGGCTTCTGACCAGGCCCGTCCAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR-3UTR CCA 90 bp ATCTGGACGGGCCTGGTCAGAAGCCTTGCTGCACACTTTGGAACCTGTGATGTGTGTCATCCAGCACTGTaGGAGGCTGAGATTTTGAGA +
Preference number: 2 (lower is better)
Translates to: IWTGLVRSLAAHFGTCDVCHPAL*EAEILR
Trigger: TCTCAAAATCTCAGCCTCCCACAGTGCTGGATGACA...CACATCACAGGTTCCAAAGTGTGCAGCAAGGCTTCTGACCAGGCCCGTCCAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR-3UTR CCA 90 bp TTGACACTTCATTCTTTCAACAAGGATTTACAGAGCGGCTACTCCCTCAGGTGCAGGAGGGCTCAGATGTaGCTCCACAGGGGCTCCAGA +
Preference number: 2 (lower is better)
Translates to: LTLHSFNKDLQSGYSLRCRRAQM*LHRGSR
Trigger: TCTGGAGCCCCTGTGGAGCCACATCTGAGCCCTCCT...GCACCTGAGGGAGTAGCCGCTCTGTAAATCCTTGTTGAAAGAATGAAGTGTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR CAA 90 bp TGGGATTGCGTCTTTTGGGATTCACACACATCCCAGGCAGACTCATaGGCTCTCTGCTTCCCATTTACAATGTGCAGCTCTTTCTCCCCC +
Preference number: 2 (lower is better)
Translates to: WDCVFWDSHTSQADS*ALCFPFTMCSSFSP
Trigger: GGGGGAGAAAGAGCTGCACATTGTAAATGGGAAGCAGAGAGCCAATGAGTCTGCCTGGGATGTGTGTGAATCCCAAAAGACGCAATCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR-3UTR TCA 90 bp GCTGAGGCCCAGGGAGAACAAATAAAGAAGGCAAACTGGTCTCTCTCTCAGAGCAAGGATGCCTCCACATaGACATGCTACCCTCTGCAT +
Preference number: 2 (lower is better)
Translates to: AEAQGEQIKKANWSLSQSKDAST*TCYPLH
Trigger: ATGCAGAGGGTAGCATGTTCATGTGGAGGCATCCTT...GCTCTGAGAGAGAGACCAGTTTGCCTTCTTTATTTGTTCTCCCTGGGCCTCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR-3UTR GCA 90 bp AAGGGATACCTAGAGACCTGGGAGATCATTATTCTGGGCATGTCTGTGAGGTGTGAGCAGCTAGGTGGTTaGAGCTTCGCGCTGTCTTTG +
Preference number: 2 (lower is better)
Translates to: KGYLETWEIIILGMSVRCEQLGG*SFALSL
Trigger: CAAAGACAGCGCGAAGCTGCAACCACCTAGCTGCTC...ACACCTCACAGACATGCCCAGAATAATGATCTCCCAGGTCTCTAGGTATCCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR-3UTR GCA 90 bp ATCTGGACGGGCCTGGTCAGAAGCCTTGCTGCACACTTTGGAACCTGTGATGTGAGGCTTTTCTTCCACTaGCTTGACATCAGAGCTTCA +
Preference number: 2 (lower is better)
Translates to: IWTGLVRSLAAHFGTCDVRLFFH*LDIRAS
Trigger: TGAAGCTCTGATGTCAAGGCAGTGGAAGAAAAGCCT...CACATCACAGGTTCCAAAGTGTGCAGCAAGGCTTCTGACCAGGCCCGTCCAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR-3UTR CCA 90 bp CTAGGTGTGGAAGATCCACCCTCAATGTTGGTGGGCAGCATTCAATCTGCTGAGTCTCTCTCTCAGAGCTaGGACAGGCTTTTCTTCCAC +
Preference number: 2 (lower is better)
Translates to: LGVEDPPSMLVGSIQSAESLSQS*DRLFFH
Trigger: GTGGAAGAAAAGCCTGTCCCAGCTCTGAGAGAGAGA...CTCAGCAGATTGAATGCTGCCCACCAACATTGAGGGTGGATCTTCCACACCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR-3UTR CCA 90 bp CCAGCCACCTTCTCCCTTCATGGTTCTGAATGTCGGGGTGCTGCACATGTGTTGATAAAGAAGGCAAACTaGTCTCTCTCTCAGAGCTGG +
Preference number: 2 (lower is better)
Translates to: PATFSLHGSECRGAAHVLIKKAN*SLSQSW
Trigger: CCAGCTCTGAGAGAGAGACCAGTTTGCCTTCTTTAT...CAACACATGTGCAGCACCCCGACATTCAGAACCATGAAGGGAGAAGGTGGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR-3UTR TCA 90 bp CCTCAGCTACAGATCCTGTGCTGCCTTCTTCTCGAGCCAGGACAGCACAACTCAACTGGTCCCCAACATTaGAATACTGAAAGACGCAAA +
Preference number: 2 (lower is better)
Translates to: PQLQILCCLLLEPGQHNSTGPQH*NTERRK
Trigger: TTTGCGTCTTTCAGTATTTCAATGTTGGGGACCAGT...TGAGTTGTGCTGTCCTGGCTCGAGAAGAAGGCAGCACAGGATCTGTAGCTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR-3UTR TCA 90 bp TTGACACTTCATTCTTTCAACAAGGATTTACAGAGCGGCTACTCCCTCAGGTGCAGAGGTTCTGGAGCTTaGGGAAGAGCAGGGCCTTTG +
Preference number: 2 (lower is better)
Translates to: LTLHSFNKDLQSGYSLRCRGSGA*GRAGPL
Trigger: CAAAGGCCCTGCTCTTCCTCAAGCTCCAGAACCTCT...GCACCTGAGGGAGTAGCCGCTCTGTAAATCCTTGTTGAAAGAATGAAGTGTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR-3UTR GCA 90 bp GACAGCGTGGAGGGAGTGGAGTCAAAAGCCTTTGTTACTTGCAGGCAGAGCCGATATGGCATTTGGGATTaGGTCTTTTGGGATTCACAC +
Preference number: 2 (lower is better)
Translates to: DSVEGVESKAFVTCRQSRYGIWD*VFWDSH
Trigger: GTGTGAATCCCAAAAGACGCAATCCCAAATGCCATA...TCGGCTCTGCCTGCAAGTAACAAAGGCTTTTGACTCCACTCCCTCCACGCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR-3UTR CCA 90 bp CCTCAGCTACAGATCCTGTGCTGCCTTCTTCTCGAGCCAGGACAGCACAACTCATTCCCAAAAAGCATTTaGCCATCCATGGCTCTAGTT +
Preference number: 2 (lower is better)
Translates to: PQLQILCCLLLEPGQHNSFPKSI*PSMALV
Trigger: AACTAGAGCCATGGATGGCCAAATGCTTTTTGGGAA...TGAGTTGTGCTGTCCTGGCTCGAGAAGAAGGCAGCACAGGATCTGTAGCTGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR-3UTR CCA 90 bp TTGACACTTCATTCTTTCAACAAGGATTTACAGAGCGGCTACTCCCTCAGGTGCGGGTGCTCTGACATCTaGAGCCTGAAAGCAGGAAGG +
Preference number: 2 (lower is better)
Translates to: LTLHSFNKDLQSGYSLRCGCSDI*SLKAGR
Trigger: CCTTCCTGCTTTCAGGCTCCAGATGTCAGAGCACCC...GCACCTGAGGGAGTAGCCGCTCTGTAAATCCTTGTTGAAAGAATGAAGTGTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR-3UTR GCA 90 bp TTGACACTTCATTCTTTCAACAAGGATTTACAGAGCGGCTACTCCCTCAGGTGCGTGGAGCTACTGCCTTaGTTGGGGCTTTATTTGGAG +
Preference number: 2 (lower is better)
Translates to: LTLHSFNKDLQSGYSLRCVELLP*LGLYLE
Trigger: CTCCAAATAAAGCCCCAAGCAAGGCAGTAGCTCCAC...GCACCTGAGGGAGTAGCCGCTCTGTAAATCCTTGTTGAAAGAATGAAGTGTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR-3UTR CCA 90 bp TCCTGTGCTGCCTTCTTCTCGAGCCAGGACAGCACAACTCACGCTCCTCTTGGTGTCCTCACACAAGTTTaGATCATTATTCTAAAAGAC +
Preference number: 2 (lower is better)
Translates to: SCAAFFSSQDSTTHAPLGVLTQV*IIILKD
Trigger: GTCTTTTAGAATAATGATCCAAACTTGTGTGAGGAC...ACCAAGAGGAGCGTGAGTTGTGCTGTCCTGGCTCGAGAAGAAGGCAGCACAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR-3UTR GCA 90 bp AAGGGATACCTAGAGACCTGGGAGATCATTATTCTGGGCATGTCTGTGAGGTGTGACTCATTGGCTCTCTaGTTCCCATTTACAATGTGC +
Preference number: 2 (lower is better)
Translates to: KGYLETWEIIILGMSVRCDSLAL*FPFTMC
Trigger: GCACATTGTAAATGGGAAGCAGAGAGCCAATGAGTC...ACACCTCACAGACATGCCCAGAATAATGATCTCCCAGGTCTCTAGGTATCCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR-3UTR CCA 90 bp TTGACACTTCATTCTTTCAACAAGGATTTACAGAGCGGCTACTCCCTCAGGTGCTTAGCTGAGGCAACATaGCGAAAACCCGTCTCTACA +
Preference number: 2 (lower is better)
Translates to: LTLHSFNKDLQSGYSLRCLAEAT*RKPVST
Trigger: TGTAGAGACGGGTTTTCGCCATGTTGCCTCAGCTAA...GCACCTGAGGGAGTAGCCGCTCTGTAAATCCTTGTTGAAAGAATGAAGTGTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR-3UTR TCA 90 bp AAGGGATACCTAGAGACCTGGGAGATCATTATTCTGGGCATGTCTGTGAGGTGTCAAAAGATAGAGATTTaGGTCCTAGGCTCTCCTGAA +
Preference number: 2 (lower is better)
Translates to: KGYLETWEIIILGMSVRCQKIEI*VLGSPE
Trigger: TTCAGGAGAGCCTAGGACTCAAATCTCTATCTTTTG...ACACCTCACAGACATGCCCAGAATAATGATCTCCCAGGTCTCTAGGTATCCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR-3UTR TCA 90 bp TTGACACTTCATTCTTTCAACAAGGATTTACAGAGCGGCTACTCCCTCAGGTGCTTGAGACATTTTAGCTaGGGCAACATGGCGAAAACC +
Preference number: 2 (lower is better)
Translates to: LTLHSFNKDLQSGYSLRCLRHFS*GNMAKT
Trigger: GGTTTTCGCCATGTTGCCTCAGCTAAAATGTCTCAA...GCACCTGAGGGAGTAGCCGCTCTGTAAATCCTTGTTGAAAGAATGAAGTGTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR-3UTR GCA 90 bp TTGACACTTCATTCTTTCAACAAGGATTTACAGAGCGGCTACTCCCTCAGGTGCGACTCATTGGCTCTCTaGTTCCCATTTACAATGTGC +
Preference number: 2 (lower is better)
Translates to: LTLHSFNKDLQSGYSLRCDSLAL*FPFTMC
Trigger: GCACATTGTAAATGGGAAGCAGAGAGCCAATGAGTC...GCACCTGAGGGAGTAGCCGCTCTGTAAATCCTTGTTGAAAGAATGAAGTGTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR-3UTR GCA 90 bp AAGGGATACCTAGAGACCTGGGAGATCATTATTCTGGGCATGTCTGTGAGGTGTTATGGCATTTGGGATTaGGTCTTTTGGGATTCACAC +
Preference number: 2 (lower is better)
Translates to: KGYLETWEIIILGMSVRCYGIWD*VFWDSH
Trigger: GTGTGAATCCCAAAAGACGCAATCCCAAATGCCATA...ACACCTCACAGACATGCCCAGAATAATGATCTCCCAGGTCTCTAGGTATCCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR-3UTR GCA 90 bp TTGACACTTCATTCTTTCAACAAGGATTTACAGAGCGGCTACTCCCTCAGGTGCGCTCTAGTTAGAGAGTaGAAGCGGAGGGAAATCATT +
Preference number: 2 (lower is better)
Translates to: LTLHSFNKDLQSGYSLRCALVRE*KRREII
Trigger: AATGATTTCCCTCCGCTTGCACTCTCTAACTAGAGC...GCACCTGAGGGAGTAGCCGCTCTGTAAATCCTTGTTGAAAGAATGAAGTGTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR-3UTR CCA 90 bp TTGACACTTCATTCTTTCAACAAGGATTTACAGAGCGGCTACTCCCTCAGGTGCCCGAGGAGAATCCATTaGCTTCTTCCCAAAAAGCAT +
Preference number: 2 (lower is better)
Translates to: LTLHSFNKDLQSGYSLRCPRRIH*LLPKKH
Trigger: ATGCTTTTTGGGAAGAAGCCAATGGATTCTCCTCGG...GCACCTGAGGGAGTAGCCGCTCTGTAAATCCTTGTTGAAAGAATGAAGTGTCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR-3UTR TCA 90 bp TTGACACTTCATTCTTTCAACAAGGATTTACAGAGCGGCTACTCCCTCAGGTGCCAAAAGATAGAGATTTaGGTCCTAGGCTCTCCTGAA +
Preference number: 2 (lower is better)
Translates to: LTLHSFNKDLQSGYSLRCQKIEI*VLGSPE
Trigger: TTCAGGAGAGCCTAGGACTCAAATCTCTATCTTTTG...GCACCTGAGGGAGTAGCCGCTCTGTAAATCCTTGTTGAAAGAATGAAGTGTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR-3UTR CCA 90 bp TTGACACTTCATTCTTTCAACAAGGATTTACAGAGCGGCTACTCCCTCAGGTGCTTCCCAAAAAGCATTTaGCCATCCATGGCTCTAGTT +
Preference number: 2 (lower is better)
Translates to: LTLHSFNKDLQSGYSLRCFPKSI*PSMALV
Trigger: AACTAGAGCCATGGATGGCCAAATGCTTTTTGGGAA...GCACCTGAGGGAGTAGCCGCTCTGTAAATCCTTGTTGAAAGAATGAAGTGTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR-3UTR CCA 90 bp TTGACACTTCATTCTTTCAACAAGGATTTACAGAGCGGCTACTCCCTCAGGTGCTTTTATTGTGTGAAGTaGCTGATGTGTTCTGTTGTG +
Preference number: 2 (lower is better)
Translates to: LTLHSFNKDLQSGYSLRCFYCVK*LMCSVV
Trigger: CACAACAGAACACATCAGCCACTTCACACAATAAAA...GCACCTGAGGGAGTAGCCGCTCTGTAAATCCTTGTTGAAAGAATGAAGTGTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR CAA 90 bp CATGTATACATTTCCCATTTTGACCTATTTCTTCATGAATATAGTTaGTCTGCTAATAACTCACACCGGTGTAACTGTCTGTATACCTGT +
Preference number: 2 (lower is better)
Translates to: HVYISHFDLFLHEYS*SANNSHRCNCLYTC
Trigger: ACAGGTATACAGACAGTTACACCGGTGTGAGTTATTAGCAGACAAACTATATTCATGAAGAAATAGGTCAAAATGGGAAATGTATACATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR TCA 72 bp ACCGGAGACCAAGCGTCAGGCAGTCAGGAGAGGCACTaGCCAGCGTCCCCTGGTGGGAGGGCCACCCTCAGC +
Preference number: 3 (lower is better)
Translates to: TGDQASGSQERH*PASPGGRATLS
Trigger: GCTGAGGGTGGCCCTCCCACCAGGGGACGCTGGTCAGTGCCTCTCCTGACTGCCTGACGCTTGGTCTCCGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR CCA 72 bp GTAGGCCAGACTGGGGCCAGATTGAGGCCGGTTCAGTaGGCCCTCCTAAGGTCGGCTCCCCCACCCGTCTCC +
Preference number: 3 (lower is better)
Translates to: VGQTGARLRPVQ*ALLRSAPPPVS
Trigger: GGAGACGGGTGGGGGAGCCGACCTTAGGAGGGCCCACTGAACCGGCCTCAATCTGGCCCCAGTCTGGCCTAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR GCA 72 bp GGTGGTTGCAGCTTCGCGCTGTCTTTGGCGGTGGGCTaGCTGAGCTGGTGGGTTCAGGCAAGGATGCCTCCA +
Preference number: 3 (lower is better)
Translates to: GGCSFALSLAVG*LSWWVQARMPP
Trigger: TGGAGGCATCCTTGCCTGAACCCACCAGCTCAGGCAGCCCACCGCCAAAGACAGCGCGAAGCTGCAACCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR GCA 72 bp CCCTGGTGGGAGGGCCACCCTCAGCTACAGATCCTGTaGTGCCTTCTTCTCGAGCCAGGACAGCACAACTCA +
Preference number: 3 (lower is better)
Translates to: PWWEGHPQLQIL*CLLLEPGQHNS
Trigger: TGAGTTGTGCTGTCCTGGCTCGAGAAGAAGGCAGCACAGGATCTGTAGCTGAGGGTGGCCCTCCCACCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR CCA 72 bp GAGGGCTCAGATGTGGCTCCACAGGGGCTCCAGATCTaGACGGGCCTGGTCAGAAGCCTTGCTGCACACTTT +
Preference number: 3 (lower is better)
Translates to: EGSDVAPQGLQI*TGLVRSLAAHF
Trigger: AAAGTGTGCAGCAAGGCTTCTGACCAGGCCCGTCCAGATCTGGAGCCCCTGTGGAGCCACATCTGAGCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR CCA 72 bp TTCGCGCTGTCTTTGGCGGTGGGCTGCCTGAGCTGGTaGGTTCAGGCAAGGATGCCTCCACATGAACATGCT +
Preference number: 3 (lower is better)
Translates to: FALSLAVGCLSW*VQARMPPHEHA
Trigger: AGCATGTTCATGTGGAGGCATCCTTGCCTGAACCCACCAGCTCAGGCAGCCCACCGCCAAAGACAGCGCGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR CCA 72 bp GACATCAGAGCTTCAGGCTCGCTGGCCTTTGGACTCTaGAACTTACACCCATGGCCCTCCTGGGTCCTGAGG +
Preference number: 3 (lower is better)
Translates to: DIRASGSLAFGL*NLHPWPSWVLR
Trigger: CCTCAGGACCCAGGAGGGCCATGGGTGTAAGTTCCAGAGTCCAAAGGCCAGCGAGCCTGAAGCTCTGATGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR CCA 72 bp ATGTGGCTCCACAGGGGCTCCAGATCTGGACGGGCCTaGTCAGAAGCCTTGCTGCACACTTTGGAACCTGTG +
Preference number: 3 (lower is better)
Translates to: MWLHRGSRSGRA*SEALLHTLEPV
Trigger: CACAGGTTCCAAAGTGTGCAGCAAGGCTTCTGACCAGGCCCGTCCAGATCTGGAGCCCCTGTGGAGCCACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR-3UTR CAA 90 bp CTAGGTGTGGAAGATCCACCCTCAATGTTGGTGGGCAGCATTCAATCTGCTGAGAGCTTCGCGCTGTCTTaGGCGGTGGGCTGCCTGAGC +
Preference number: 3 (lower is better)
Translates to: LGVEDPPSMLVGSIQSAESFALS*AVGCLS
Trigger: GCTCAGGCAGCCCACCGCCAAAGACAGCGCGAAGCT...CTCAGCAGATTGAATGCTGCCCACCAACATTGAGGGTGGATCTTCCACACCTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR-3UTR CAA 90 bp TCCTGTGCTGCCTTCTTCTCGAGCCAGGACAGCACAACTCACGCTCCTCTTGGTGGAGCAGCTAGGTGGTaGCAGCTTCGCGCTGTCTTT +
Preference number: 3 (lower is better)
Translates to: SCAAFFSSQDSTTHAPLGGAARW*QLRAVF
Trigger: AAAGACAGCGCGAAGCTGCAACCACCTAGCTGCTCC...ACCAAGAGGAGCGTGAGTTGTGCTGTCCTGGCTCGAGAAGAAGGCAGCACAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR-3UTR CAA 90 bp GGACGCCCTTCAGGCCCTCAGCATGTTGTAGCCACCTGTCCTGGGGCAGCGAGTTTTTCTTCCACTGCCTaGACATCAGAGCTTCAGGCT +
Preference number: 3 (lower is better)
Translates to: GRPSGPQHVVATCPGAASFSSTA*TSELQA
Trigger: AGCCTGAAGCTCTGATGTCAAGGCAGTGGAAGAAAA...ACTCGCTGCCCCAGGACAGGTGGCTACAACATGCTGAGGGCCTGAAGGGCGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR-3UTR CAA 90 bp GACAGCGTGGAGGGAGTGGAGTCAAAAGCCTTTGTTACTTGCAGGCAGAGCCGACAGGCTCGCTGGCCTTaGGACTCTGGAACTTACACC +
Preference number: 3 (lower is better)
Translates to: DSVEGVESKAFVTCRQSRQARWP*DSGTYT
Trigger: GGTGTAAGTTCCAGAGTCCAAAGGCCAGCGAGCCTG...TCGGCTCTGCCTGCAAGTAACAAAGGCTTTTGACTCCACTCCCTCCACGCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR GCA 72 bp GGACAGCACAACTCACGCTCCTCTTGGTGGGAGCTCTaGATGAGATGGGATTTCCCTAGCACTTTGCCTGCG +
Preference number: 3 (lower is better)
Translates to: GQHNSRSSWWEL*MRWDFPSTLPA
Trigger: CGCAGGCAAAGTGCTAGGGAAATCCCATCTCATGCAGAGCTCCCACCAAGAGGAGCGTGAGTTGTGCTGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR GCA 72 bp TCAGAAGCCTTGCTGCACACTTTGGAACCTGTGATGTaGAGCCTGTGTCCTGCTTGCAGCAGGCCTCAGGGA +
Preference number: 3 (lower is better)
Translates to: SEALLHTLEPVM*SLCPACSRPQG
Trigger: TCCCTGAGGCCTGCTGCAAGCAGGACACAGGCTGCACATCACAGGTTCCAAAGTGTGCAGCAAGGCTTCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR GCA 72 bp TTCAACAAGGATTTACAGAGCGGCTACTCCCTCAGGTaGAGCACAAAGCCCCAGGCTGGGGTTGAGTCAGGG +
Preference number: 3 (lower is better)
Translates to: FNKDLQSGYSLR*STKPQAGVESG
Trigger: CCCTGACTCAACCCCAGCCTGGGGCTTTGTGCTGCACCTGAGGGAGTAGCCGCTCTGTAAATCCTTGTTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR CCA 72 bp CTCGAGCCAGGACAGCACAACTCACGCTCCTCTTGGTaGGAGCTCTGCATGAGATGGGATTTCCCTAGCACT +
Preference number: 3 (lower is better)
Translates to: LEPGQHNSRSSW*ELCMRWDFPST
Trigger: AGTGCTAGGGAAATCCCATCTCATGCAGAGCTCCCACCAAGAGGAGCGTGAGTTGTGCTGTCCTGGCTCGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR CCA 72 bp CTTCTCGAGCCAGGACAGCACAACTCACGCTCCTCTTaGTGGGAGCTCTGCATGAGATGGGATTTCCCTAGC +
Preference number: 3 (lower is better)
Translates to: LLEPGQHNSRSS*WELCMRWDFPS
Trigger: GCTAGGGAAATCCCATCTCATGCAGAGCTCCCACCAAGAGGAGCGTGAGTTGTGCTGTCCTGGCTCGAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR-3UTR CAA 90 bp TCCTGTGCTGCCTTCTTCTCGAGCCAGGACAGCACAACTCACGCTCCTCTTGGTGGTGGAGCTACTGCCTaGCTTGGGGCTTTATTTGGA +
Preference number: 3 (lower is better)
Translates to: SCAAFFSSQDSTTHAPLGGGATA*LGALFG
Trigger: TCCAAATAAAGCCCCAAGCAAGGCAGTAGCTCCACC...ACCAAGAGGAGCGTGAGTTGTGCTGTCCTGGCTCGAGAAGAAGGCAGCACAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR TCA 72 bp CTCTCAGAGCTGGGACAGGCTTTTCTTCCACTGCCTTaGCATCAGAGCTTCAGGCTCGCTGGCCTTTGGACT +
Preference number: 3 (lower is better)
Translates to: LSELGQAFLPLP*HQSFRLAGLWT
Trigger: AGTCCAAAGGCCAGCGAGCCTGAAGCTCTGATGTCAAGGCAGTGGAAGAAAAGCCTGTCCCAGCTCTGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR TCA 72 bp AGCACAACTCACGCTCCTCTTGGTGGGAGCTCTGCATaGGATGGGATTTCCCTAGCACTTTGCCTGCGACCT +
Preference number: 3 (lower is better)
Translates to: STTHAPLGGSSA*DGISLALCLRP
Trigger: AGGTCGCAGGCAAAGTGCTAGGGAAATCCCATCTCATGCAGAGCTCCCACCAAGAGGAGCGTGAGTTGTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR CCA 72 bp TCTTCCACTGCCTTGACATCAGAGCTTCAGGCTCGCTaGCCTTTGGACTCTGGAACTTACACCCATGGCCCT +
Preference number: 3 (lower is better)
Translates to: SSTALTSELQAR*PLDSGTYTHGP
Trigger: AGGGCCATGGGTGTAAGTTCCAGAGTCCAAAGGCCAGCGAGCCTGAAGCTCTGATGTCAAGGCAGTGGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR CCA 72 bp CTGAAGGGGAATGGCGATCTGACAGCGTGGAGGGAGTaGAGTCAAAAGCCTTTGTTACTTGCAGGCAGAGCC +
Preference number: 3 (lower is better)
Translates to: LKGNGDLTAWRE*SQKPLLLAGRA
Trigger: GGCTCTGCCTGCAAGTAACAAAGGCTTTTGACTCCACTCCCTCCACGCTGTCAGATCGCCATTCCCCTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR-3UTR CAA 90 bp CTAGGTGTGGAAGATCCACCCTCAATGTTGGTGGGCAGCATTCAATCTGCTGAGCAGGCTCGCTGGCCTTaGGACTCTGGAACTTACACC +
Preference number: 3 (lower is better)
Translates to: LGVEDPPSMLVGSIQSAEQARWP*DSGTYT
Trigger: GGTGTAAGTTCCAGAGTCCAAAGGCCAGCGAGCCTG...CTCAGCAGATTGAATGCTGCCCACCAACATTGAGGGTGGATCTTCCACACCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR-3UTR CAA 90 bp CCTCAGCTACAGATCCTGTGCTGCCTTCTTCTCGAGCCAGGACAGCACAACTCAGGTGGAGCTACTGCCTaGCTTGGGGCTTTATTTGGA +
Preference number: 3 (lower is better)
Translates to: PQLQILCCLLLEPGQHNSGGATA*LGALFG
Trigger: TCCAAATAAAGCCCCAAGCAAGGCAGTAGCTCCACC...TGAGTTGTGCTGTCCTGGCTCGAGAAGAAGGCAGCACAGGATCTGTAGCTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR-3UTR CAA 90 bp TCCTGTGCTGCCTTCTTCTCGAGCCAGGACAGCACAACTCACGCTCCTCTTGGTGCCGAGGAGAATCCATaGGCTTCTTCCCAAAAAGCA +
Preference number: 3 (lower is better)
Translates to: SCAAFFSSQDSTTHAPLGAEENP*ASSQKA
Trigger: TGCTTTTTGGGAAGAAGCCAATGGATTCTCCTCGGC...ACCAAGAGGAGCGTGAGTTGTGCTGTCCTGGCTCGAGAAGAAGGCAGCACAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR TCA 72 bp CATGGCTGCCTGTGGAGCCCAATCCTGGCATCTTGCTaGGGTGTGCTGGTTGAGGTAGAAGCTAATCTTGGA +
Preference number: 3 (lower is better)
Translates to: HGCLWSPILASC*GVLVEVEANLG
Trigger: TCCAAGATTAGCTTCTACCTCAACCAGCACACCTCAGCAAGATGCCAGGATTGGGCTCCACAGGCAGCCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR GCA 72 bp TCTCTCTCTCAGAGCTGGGACAGGCTTTTCTTCCACTaGCTTGACATCAGAGCTTCAGGCTCGCTGGCCTTT +
Preference number: 3 (lower is better)
Translates to: SLSQSWDRLFFH*LDIRASGSLAF
Trigger: AAAGGCCAGCGAGCCTGAAGCTCTGATGTCAAGGCAGTGGAAGAAAAGCCTGTCCCAGCTCTGAGAGAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR-3UTR CAA 90 bp GACAGCGTGGAGGGAGTGGAGTCAAAAGCCTTTGTTACTTGCAGGCAGAGCCGAGAGCTACTGCCTTGCTaGGGGCTTTATTTGGAGACT +
Preference number: 3 (lower is better)
Translates to: DSVEGVESKAFVTCRQSRELLPC*GLYLET
Trigger: AGTCTCCAAATAAAGCCCCAAGCAAGGCAGTAGCTC...TCGGCTCTGCCTGCAAGTAACAAAGGCTTTTGACTCCACTCCCTCCACGCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR-3UTR CAA 90 bp CCTCAGCTACAGATCCTGTGCTGCCTTCTTCTCGAGCCAGGACAGCACAACTCAGCCGAGGAGAATCCATaGGCTTCTTCCCAAAAAGCA +
Preference number: 3 (lower is better)
Translates to: PQLQILCCLLLEPGQHNSAEENP*ASSQKA
Trigger: TGCTTTTTGGGAAGAAGCCAATGGATTCTCCTCGGC...TGAGTTGTGCTGTCCTGGCTCGAGAAGAAGGCAGCACAGGATCTGTAGCTGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR-3UTR CAA 90 bp CCTCAGCTACAGATCCTGTGCTGCCTTCTTCTCGAGCCAGGACAGCACAACTCAAAAAGCCTTTGTTACTaGCAGGCAGAGCCGAGGAGA +
Preference number: 3 (lower is better)
Translates to: PQLQILCCLLLEPGQHNSKSLCY*QAEPRR
Trigger: TCTCCTCGGCTCTGCCTGCAAGTAACAAAGGCTTTT...TGAGTTGTGCTGTCCTGGCTCGAGAAGAAGGCAGCACAGGATCTGTAGCTGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR TCA 72 bp TTGAGGTTGATGCAAGGATCAGGTAAGCGAATCTGGTaGAACTTGCCCCCAGCTCGGCTCAGTGATGCTGCT +
Preference number: 3 (lower is better)
Translates to: LRLMQGSGKRIW*NLPPARLSDAA
Trigger: AGCAGCATCACTGAGCCGAGCTGGGGGCAAGTTTCACCAGATTCGCTTACCTGATCCTTGCATCAACCTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR GCA 72 bp AGCGTGGAGGGAGTGGAGTCAAAAGCCTTTGTTACTTaGAGGCAGAGCCGAGGAGAATCCATTGGCTTCTTC +
Preference number: 3 (lower is better)
Translates to: SVEGVESKAFVT*RQSRGESIGFF
Trigger: GAAGAAGCCAATGGATTCTCCTCGGCTCTGCCTGCAAGTAACAAAGGCTTTTGACTCCACTCCCTCCACGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR-3UTR CAA 90 bp AAGGGATACCTAGAGACCTGGGAGATCATTATTCTGGGCATGTCTGTGAGGTGTGGAGCAGCTAGGTGGTaGCAGCTTCGCGCTGTCTTT +
Preference number: 3 (lower is better)
Translates to: KGYLETWEIIILGMSVRCGAARW*QLRAVF
Trigger: AAAGACAGCGCGAAGCTGCAACCACCTAGCTGCTCC...ACACCTCACAGACATGCCCAGAATAATGATCTCCCAGGTCTCTAGGTATCCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR-3UTR CAA 90 bp TGCCAAGTTGACAAGGGGTGGACCTGTGGACTTCATTTTGGGTGTGAACTCGACTCCCAGGCAGACTCATaGGCTCTCTGCTTCCCATTT +
Preference number: 3 (lower is better)
Translates to: CQVDKGWTCGLHFGCELDSQADS*ALCFPF
Trigger: AAATGGGAAGCAGAGAGCCAATGAGTCTGCCTGGGA...GTCGAGTTCACACCCAAAATGAAGTCCACAGGTCCACCCCTTGTCAACTTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR-3UTR CAA 90 bp GACAGCGTGGAGGGAGTGGAGTCAAAAGCCTTTGTTACTTGCAGGCAGAGCCGACTTCCCAAAAAGCATTaGGCCATCCATGGCTCTAGT +
Preference number: 3 (lower is better)
Translates to: DSVEGVESKAFVTCRQSRLPKKH*AIHGSS
Trigger: ACTAGAGCCATGGATGGCCAAATGCTTTTTGGGAAG...TCGGCTCTGCCTGCAAGTAACAAAGGCTTTTGACTCCACTCCCTCCACGCTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR-3UTR CAA 90 bp GACAGCGTGGAGGGAGTGGAGTCAAAAGCCTTTGTTACTTGCAGGCAGAGCCGACTATGGCATTTGGGATaGCGTCTTTTGGGATTCACA +
Preference number: 3 (lower is better)
Translates to: DSVEGVESKAFVTCRQSRLWHLG*RLLGFT
Trigger: TGTGAATCCCAAAAGACGCAATCCCAAATGCCATAG...TCGGCTCTGCCTGCAAGTAACAAAGGCTTTTGACTCCACTCCCTCCACGCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR TCA 72 bp CCTACAGACACCAGCCACCTTCTCCCTTCATGGTTCTaGATGTCGGGGTGCTGCACATGTGTTGTGACATTT +
Preference number: 3 (lower is better)
Translates to: PTDTSHLLPSWF*MSGCCTCVVTF
Trigger: AAATGTCACAACACATGTGCAGCACCCCGACATTCAGAACCATGAAGGGAGAAGGTGGCTGGTGTCTGTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR GCA 72 bp GCAGACTCATTGGCTCTCTGCTTCCCATTTACAATGTaGAGCTCTTTCTCCCCCTCAGTTTCAAGCCCTAGC +
Preference number: 3 (lower is better)
Translates to: ADSLALCFPFTM*SSFSPSVSSPS
Trigger: GCTAGGGCTTGAAACTGAGGGGGAGAAAGAGCTGCACATTGTAAATGGGAAGCAGAGAGCCAATGAGTCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR CCA 72 bp GCTGAGGCCCAGGGAGAACAAATAAAGAAGGCAAACTaGTCTCTCTCTCAGAGCTGGGACAGGCTTTTCTTC +
Preference number: 3 (lower is better)
Translates to: AEAQGEQIKKAN*SLSQSWDRLFF
Trigger: GAAGAAAAGCCTGTCCCAGCTCTGAGAGAGAGACCAGTTTGCCTTCTTTATTTGTTCTCCCTGGGCCTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR-3UTR CAA 90 bp TGCCAAGTTGACAAGGGGTGGACCTGTGGACTTCATTTTGGGTGTGAACTCGACTTTTCTTCCACTGCCTaGACATCAGAGCTTCAGGCT +
Preference number: 3 (lower is better)
Translates to: CQVDKGWTCGLHFGCELDFSSTA*TSELQA
Trigger: AGCCTGAAGCTCTGATGTCAAGGCAGTGGAAGAAAA...GTCGAGTTCACACCCAAAATGAAGTCCACAGGTCCACCCCTTGTCAACTTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR TCA 72 bp TCCACCCTCAATGTTGGTGGGCAGCATTCAATCTGCTaGGGCCCAGGGAGAACAAATAAAGAAGGCAAACTG +
Preference number: 3 (lower is better)
Translates to: STLNVGGQHSIC*GPGRTNKEGKL
Trigger: CAGTTTGCCTTCTTTATTTGTTCTCCCTGGGCCTCAGCAGATTGAATGCTGCCCACCAACATTGAGGGTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR CCA 72 bp CGAGGAGAATCCATTGGCTTCTTCCCAAAAAGCATTTaGCCATCCATGGCTCTAGTTAGAGAGTGCAAGCGG +
Preference number: 3 (lower is better)
Translates to: RGESIGFFPKSI*PSMALVRECKR
Trigger: CCGCTTGCACTCTCTAACTAGAGCCATGGATGGCCAAATGCTTTTTGGGAAGAAGCCAATGGATTCTCCTCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR CCA 72 bp TGTGAACTCGACTGGGTTAAGGGATACCTAGAGACCTaGGAGATCATTATTCTGGGCATGTCTGTGAGGTGT +
Preference number: 3 (lower is better)
Translates to: CELDWVKGYLET*EIIILGMSVRC
Trigger: ACACCTCACAGACATGCCCAGAATAATGATCTCCCAGGTCTCTAGGTATCCCTTAACCCAGTCGAGTTCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR TCA 72 bp ACACAGTCCCCACATCAGGGACAAAAGATAGAGATTTaGGTCCTAGGCTCTCCTGAAAGTGGTCATGAAGAC +
Preference number: 3 (lower is better)
Translates to: TQSPHQGQKIEI*VLGSPESGHED
Trigger: GTCTTCATGACCACTTTCAGGAGAGCCTAGGACTCAAATCTCTATCTTTTGTCCCTGATGTGGGGACTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR CCA 72 bp CAAATAAAGAAGGCAAACTGGTCTCTCTCTCAGAGCTaGGACAGGCTTTTCTTCCACTGCCTTGACATCAGA +
Preference number: 3 (lower is better)
Translates to: QIKKANWSLSQS*DRLFFHCLDIR
Trigger: TCTGATGTCAAGGCAGTGGAAGAAAAGCCTGTCCCAGCTCTGAGAGAGAGACCAGTTTGCCTTCTTTATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR-3UTR CAA 90 bp TTGACACTTCATTCTTTCAACAAGGATTTACAGAGCGGCTACTCCCTCAGGTGCTTGGATTCTCAACACTaGGGACTATGGCATTTGGGA +
Preference number: 3 (lower is better)
Translates to: LTLHSFNKDLQSGYSLRCLDSQH*GLWHLG
Trigger: TCCCAAATGCCATAGTCCCAAGTGTTGAGAATCCAA...GCACCTGAGGGAGTAGCCGCTCTGTAAATCCTTGTTGAAAGAATGAAGTGTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR-3UTR CAA 90 bp TTGACACTTCATTCTTTCAACAAGGATTTACAGAGCGGCTACTCCCTCAGGTGCACAACTGCATTGAGGTaGATGCAAGGATCAGGTAAG +
Preference number: 3 (lower is better)
Translates to: LTLHSFNKDLQSGYSLRCTTALR*MQGSGK
Trigger: CTTACCTGATCCTTGCATCAACCTCAATGCAGTTGT...GCACCTGAGGGAGTAGCCGCTCTGTAAATCCTTGTTGAAAGAATGAAGTGTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR TCA 72 bp GAGTGCAAGCGGAGGGAAATCATTGTTTGTAGGGGATaGTTCGTGACAAATAATCTAGCACTGCCCATCAAC +
Preference number: 3 (lower is better)
Translates to: ECKRREIIVCRG*FVTNNLALPIN
Trigger: GTTGATGGGCAGTGCTAGATTATTTGTCACGAATCATCCCCTACAAACAATGATTTCCCTCCGCTTGCACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR GCA 72 bp TTTTGTACATCTGCAATTGTGAGAGATGAAAGTTCTTaGCATCTCCGCTCTTTGGGCAACTGTGTGTGTGGT +
Preference number: 3 (lower is better)
Translates to: FCTSAIVRDESS*HLRSLGNCVCG
Trigger: ACCACACACACAGTTGCCCAAAGAGCGGAGATGGCAAGAACTTTCATCTCTCACAATTGCAGATGTACAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR GCA 72 bp AAGCAGCAGCAGATGCTGGTGCCATGCCTCTACACCTaGAGAATTACAAGCCAAATAAACTTCTTTACTTTA +
Preference number: 3 (lower is better)
Translates to: KQQQMLVPCLYT*RITSQINFFTL
Trigger: TAAAGTAAAGAAGTTTATTTGGCTTGTAATTCTGCAGGTGTAGAGGCATGGCACCAGCATCTGCTGCTGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR GCA 72 bp AAAGCGAGGTGCACACAATTACCAAGCATAGTGACATaGATGTATACATTTCCCATTTTGACCTATTTCTTC +
Preference number: 3 (lower is better)
Translates to: KARCTQLPSIVT*MYTFPILTYFF
Trigger: GAAGAAATAGGTCAAAATGGGAAATGTATACATGCATGTCACTATGCTTGGTAATTGTGTGCACCTCGCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR TCA 72 bp CTAAAAGACATAATCCCAAACACTGGTCCCCAACATTaGAATACTGAAAGACGCAAATCTCTAAAGTTTCAA +
Preference number: 3 (lower is better)
Translates to: LKDIIPNTGPQH*NTERRKSLKFQ
Trigger: TTGAAACTTTAGAGATTTGCGTCTTTCAGTATTTCAATGTTGGGGACCAGTGTTTGGGATTATGTCTTTTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp CTTCGCGCTGTCTTTGGCGGTGGGCTGCCTGAGCTGGTGGGTTCAGGCAAGGATCGATCATGCGCCGGCTaGCCGGGGAGCCCGGGAAGC +
Preference number: 4 (lower is better)
Translates to: LRAVFGGGLPELVGSGKDRSCAG*PGSPGS
Trigger: GCTTCCCGGGCTCCCCGGGCAGCCGGCGCATGATCG...ATCCTTGCCTGAACCCACCAGCTCAGGCAGCCCACCGCCAAAGACAGCGCGAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp GGACGCCCTTCAGGCCCTCAGCATGTTGTAGCCACCTGTCCTGGGGCAGCGAGTTGTCCCCTCCCTGGCTaGAGCCACGGCTGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: GRPSGPQHVVATCPGAASCPLPG*SHGCWV
Trigger: GACCCAGCAGCCGTGGCTGCAGCCAGGGAGGGGACA...ACTCGCTGCCCCAGGACAGGTGGCTACAACATGCTGAGGGCCTGAAGGGCGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp CTTCGCGCTGTCTTTGGCGGTGGGCTGCCTGAGCTGGTGGGTTCAGGCAAGGATCCCCTCCGAGGGCCTTaGTCTCTCCGGCGAGCAGGC +
Preference number: 4 (lower is better)
Translates to: LRAVFGGGLPELVGSGKDPLRGP*SLRRAG
Trigger: GCCTGCTCGCCGGAGAGAGCAAGGCCCTCGGAGGGG...ATCCTTGCCTGAACCCACCAGCTCAGGCAGCCCACCGCCAAAGACAGCGCGAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR TCA 90 bp CTTCGCGCTGTCTTTGGCGGTGGGCTGCCTGAGCTGGTGGGTTCAGGCAAGGATCCCCAGGGCCGGCCCTaGCAGACTCTCAGACACGCA +
Preference number: 4 (lower is better)
Translates to: LRAVFGGGLPELVGSGKDPQGRP*QTLRHA
Trigger: TGCGTGTCTGAGAGTCTGTCAGGGCCGGCCCTGGGG...ATCCTTGCCTGAACCCACCAGCTCAGGCAGCCCACCGCCAAAGACAGCGCGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR TCA 90 bp CTTCGCGCTGTCTTTGGCGGTGGGCTGCCTGAGCTGGTGGGTTCAGGCAAGGATCGGTGGGCTCCACCCTaGGCCAGCTCAGGTCCTGGA +
Preference number: 4 (lower is better)
Translates to: LRAVFGGGLPELVGSGKDRWAPP*ASSGPG
Trigger: TCCAGGACCTGAGCTGGCTCAGGGTGGAGCCCACCG...ATCCTTGCCTGAACCCACCAGCTCAGGCAGCCCACCGCCAAAGACAGCGCGAAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp GGACGCCCTTCAGGCCCTCAGCATGTTGTAGCCACCTGTCCTGGGGCAGCGAGTGGCTGCAGCCACGGCTaGTGGGTCTGGGGGTTTCTC +
Preference number: 4 (lower is better)
Translates to: GRPSGPQHVVATCPGAASGCSHG*WVWGFL
Trigger: GAGAAACCCCCAGACCCAGCAGCCGTGGCTGCAGCC...ACTCGCTGCCCCAGGACAGGTGGCTACAACATGCTGAGGGCCTGAAGGGCGTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp CTTCGCGCTGTCTTTGGCGGTGGGCTGCCTGAGCTGGTGGGTTCAGGCAAGGATTGTCCCCTCCCTGGCTaGAGCCACGGCTGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: LRAVFGGGLPELVGSGKDCPLPG*SHGCWV
Trigger: GACCCAGCAGCCGTGGCTGCAGCCAGGGAGGGGACA...ATCCTTGCCTGAACCCACCAGCTCAGGCAGCCCACCGCCAAAGACAGCGCGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp CTTCGCGCTGTCTTTGGCGGTGGGCTGCCTGAGCTGGTGGGTTCAGGCAAGGATGGAGCCCGGGAAGCTTaGACTGCCCACCAGCTGCCC +
Preference number: 4 (lower is better)
Translates to: LRAVFGGGLPELVGSGKDGAREA*TAHQLP
Trigger: GGGCAGCTGGTGGGCAGTGCAAGCTTCCCGGGCTCC...ATCCTTGCCTGAACCCACCAGCTCAGGCAGCCCACCGCCAAAGACAGCGCGAAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp GGACGCCCTTCAGGCCCTCAGCATGTTGTAGCCACCTGTCCTGGGGCAGCGAGTCCTGGGTGCTCAGCCTaGTGGAGGGCCACTTGTGGC +
Preference number: 4 (lower is better)
Translates to: GRPSGPQHVVATCPGAASPGCSA*WRATCG
Trigger: GCCACAAGTGGCCCTCCAGCAGGCTGAGCACCCAGG...ACTCGCTGCCCCAGGACAGGTGGCTACAACATGCTGAGGGCCTGAAGGGCGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp GGACGCCCTTCAGGCCCTCAGCATGTTGTAGCCACCTGTCCTGGGGCAGCGAGTCTGTCCAACAGGTCCTaGCACAGGCCGTCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: GRPSGPQHVVATCPGAASLSNRS*HRPSSP
Trigger: GGGGCTGGACGGCCTGTGCCAGGACCTGTTGGACAG...ACTCGCTGCCCCAGGACAGGTGGCTACAACATGCTGAGGGCCTGAAGGGCGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp CTTCGCGCTGTCTTTGGCGGTGGGCTGCCTGAGCTGGTGGGTTCAGGCAAGGATGATGGGGCTCAGCCATaGCTGGCCCAGAGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: LRAVFGGGLPELVGSGKDDGAQP*LAQRPP
Trigger: TGGGGGCCTCTGGGCCAGCCATGGCTGAGCCCCATC...ATCCTTGCCTGAACCCACCAGCTCAGGCAGCCCACCGCCAAAGACAGCGCGAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp CTTCGCGCTGTCTTTGGCGGTGGGCTGCCTGAGCTGGTGGGTTCAGGCAAGGATCTGACCAGCGTCCCCTaGTGGGAGGGCCACCCTCAG +
Preference number: 4 (lower is better)
Translates to: LRAVFGGGLPELVGSGKDLTSVP*WEGHPQ
Trigger: CTGAGGGTGGCCCTCCCACCAGGGGACGCTGGTCAG...ATCCTTGCCTGAACCCACCAGCTCAGGCAGCCCACCGCCAAAGACAGCGCGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp GGACGCCCTTCAGGCCCTCAGCATGTTGTAGCCACCTGTCCTGGGGCAGCGAGTGCACGCGTGGTTCAGTaGCTGGGGCTGGGGTGGATT +
Preference number: 4 (lower is better)
Translates to: GRPSGPQHVVATCPGAASARVVQ*LGLGWI
Trigger: AATCCACCCCAGCCCCAGGCACTGAACCACGCGTGC...ACTCGCTGCCCCAGGACAGGTGGCTACAACATGCTGAGGGCCTGAAGGGCGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000321420.5
CDS-3UTR GCA 90 bp CTTCGCGCTGTCTTTGGCGGTGGGCTGCCTGAGCTGGTGGGTTCAGGCAAGGATTGGCAGCCGTGGCCCTaGCTGCCCCAGACATGCTGT +
Preference number: 4 (lower is better)
Translates to: LRAVFGGGLPELVGSGKDWQPWP*LPQTCC
Trigger: ACAGCATGTCTGGGGCAGGCAGGGCCACGGCTGCCA...ATCCTTGCCTGAACCCACCAGCTCAGGCAGCCCACCGCCAAAGACAGCGCGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp GGACGCCCTTCAGGCCCTCAGCATGTTGTAGCCACCTGTCCTGGGGCAGCGAGTCAGCTTCTCTGTGGGTaGCCTAGGGGCTCCCTGGGA +
Preference number: 4 (lower is better)
Translates to: GRPSGPQHVVATCPGAASQLLCG*PRGSLG
Trigger: TCCCAGGGAGCCCCTAGGGCACCCACAGAGAAGCTG...ACTCGCTGCCCCAGGACAGGTGGCTACAACATGCTGAGGGCCTGAAGGGCGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp GGACGCCCTTCAGGCCCTCAGCATGTTGTAGCCACCTGTCCTGGGGCAGCGAGTCTGCCGTGTGCCACCTaGTCCACAGCCTCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: GRPSGPQHVVATCPGAASLPCAT*STASVL
Trigger: CAGCACAGAGGCTGTGGAGCAGGTGGCACACGGCAG...ACTCGCTGCCCCAGGACAGGTGGCTACAACATGCTGAGGGCCTGAAGGGCGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp GGACGCCCTTCAGGCCCTCAGCATGTTGTAGCCACCTGTCCTGGGGCAGCGAGTCAGAGTCCAGCTGGCTaGCGTGTGCCACCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: GRPSGPQHVVATCPGAASQSPAG*RVPPAP
Trigger: TGGAGCAGGTGGCACACGGCAGCCAGCTGGACTCTG...ACTCGCTGCCCCAGGACAGGTGGCTACAACATGCTGAGGGCCTGAAGGGCGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp CTTCGCGCTGTCTTTGGCGGTGGGCTGCCTGAGCTGGTGGGTTCAGGCAAGGATCTGAGCAGCCTGGGTTaGGCTCTCCGGGCCCTCGTT +
Preference number: 4 (lower is better)
Translates to: LRAVFGGGLPELVGSGKDLSSLG*ALRALV
Trigger: AACGAGGGCCCGGAGAGCCCAACCCAGGCTGCTCAG...ATCCTTGCCTGAACCCACCAGCTCAGGCAGCCCACCGCCAAAGACAGCGCGAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp CTTCGCGCTGTCTTTGGCGGTGGGCTGCCTGAGCTGGTGGGTTCAGGCAAGGATCCTGGAGAGGGCCCCTaGGAACCTTGCTCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: LRAVFGGGLPELVGSGKDPGEGP*EPCSPG
Trigger: GCCTGGAGAGCAAGGTTCCCAGGGGCCCTCTCCAGG...ATCCTTGCCTGAACCCACCAGCTCAGGCAGCCCACCGCCAAAGACAGCGCGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp CTTCGCGCTGTCTTTGGCGGTGGGCTGCCTGAGCTGGTGGGTTCAGGCAAGGATTCCCTGTCTGTCCCCTaGGGGCCTGAAAGCCACGGG +
Preference number: 4 (lower is better)
Translates to: LRAVFGGGLPELVGSGKDSLSVP*GPESHG
Trigger: CCCGTGGCTTTCAGGCCCCCAGGGGACAGACAGGGA...ATCCTTGCCTGAACCCACCAGCTCAGGCAGCCCACCGCCAAAGACAGCGCGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp CTTCGCGCTGTCTTTGGCGGTGGGCTGCCTGAGCTGGTGGGTTCAGGCAAGGATCGGGCTGCTCGCTCTTaGGGGTGCCTGTGTCGATGG +
Preference number: 4 (lower is better)
Translates to: LRAVFGGGLPELVGSGKDRAARS*GCLCRW
Trigger: CCATCGACACAGGCACCCCCAAGAGCGAGCAGCCCG...ATCCTTGCCTGAACCCACCAGCTCAGGCAGCCCACCGCCAAAGACAGCGCGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp CTTCGCGCTGTCTTTGGCGGTGGGCTGCCTGAGCTGGTGGGTTCAGGCAAGGATGCCCATCAACAAGGGTaGGAGGGTCCCGCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: LRAVFGGGLPELVGSGKDAHQQG*EGPASP
Trigger: AGGGCTGGCGGGACCCTCCCACCCTTGTTGATGGGC...ATCCTTGCCTGAACCCACCAGCTCAGGCAGCCCACCGCCAAAGACAGCGCGAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR TCA 90 bp CTTCGCGCTGTCTTTGGCGGTGGGCTGCCTGAGCTGGTGGGTTCAGGCAAGGATCCACAGCCTCTGTGCTaGGCTGCAAGGGCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: LRAVFGGGLPELVGSGKDPQPLC*AARAGP
Trigger: AGGACCAGCCCTTGCAGCTCAGCACAGAGGCTGTGG...ATCCTTGCCTGAACCCACCAGCTCAGGCAGCCCACCGCCAAAGACAGCGCGAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR TCA 90 bp GGACGCCCTTCAGGCCCTCAGCATGTTGTAGCCACCTGTCCTGGGGCAGCGAGTCTGTGGTCCTGTGTGTaGGTCTTGGGAGGAGGGCTC +
Preference number: 4 (lower is better)
Translates to: GRPSGPQHVVATCPGAASLWSCV*VLGGGL
Trigger: GAGCCCTCCTCCCAAGACTCACACACAGGACCACAG...ACTCGCTGCCCCAGGACAGGTGGCTACAACATGCTGAGGGCCTGAAGGGCGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp GGACGCCCTTCAGGCCCTCAGCATGTTGTAGCCACCTGTCCTGGGGCAGCGAGTGCCTCTGTGCTGAGCTaGAAGGGCTGGTCCTCCACA +
Preference number: 4 (lower is better)
Translates to: GRPSGPQHVVATCPGAASASVLS*KGWSST
Trigger: TGTGGAGGACCAGCCCTTGCAGCTCAGCACAGAGGC...ACTCGCTGCCCCAGGACAGGTGGCTACAACATGCTGAGGGCCTGAAGGGCGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp CTTCGCGCTGTCTTTGGCGGTGGGCTGCCTGAGCTGGTGGGTTCAGGCAAGGATCTGCCGTGTGCCACCTaGTCCACAGCCTCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: LRAVFGGGLPELVGSGKDLPCAT*STASVL
Trigger: CAGCACAGAGGCTGTGGAGCAGGTGGCACACGGCAG...ATCCTTGCCTGAACCCACCAGCTCAGGCAGCCCACCGCCAAAGACAGCGCGAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp CCAGCCACCTTCTCCCTTCATGGTTCTGAATGTCGGGGTGCTGCACATGTGTTGTGCCAGTGCCCCAGCTaGGCTGGGGGCCCGCAGTGC +
Preference number: 4 (lower is better)
Translates to: PATFSLHGSECRGAAHVLCQCPS*AGGPQC
Trigger: GCACTGCGGGCCCCCAGCGCAGCTGGGGCACTGGCA...CAACACATGTGCAGCACCCCGACATTCAGAACCATGAAGGGAGAAGGTGGCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000423981.1
CDS-3UTR CCA 90 bp GGACGCCCTTCAGGCCCTCAGCATGTTGTAGCCACCTGTCCTGGGGCAGCGAGTCACGGCTGCTGGGTCTaGGGGTTTCTCGTGGGAAAC +
Preference number: 4 (lower is better)
Translates to: GRPSGPQHVVATCPGAASHGCWV*GFLVGN
Trigger: GTTTCCCACGAGAAACCCCCAGACCCAGCAGCCGTG...ACTCGCTGCCCCAGGACAGGTGGCTACAACATGCTGAGGGCCTGAAGGGCGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp CTTCGCGCTGTCTTTGGCGGTGGGCTGCCTGAGCTGGTGGGTTCAGGCAAGGATTCAGAGGCTTCATTCTaGGCGGGCGAGGCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: LRAVFGGGLPELVGSGKDSEASF*AGEASC
Trigger: GCAGCTGGCCTCGCCCGCCCAGAATGAAGCCTCTGA...ATCCTTGCCTGAACCCACCAGCTCAGGCAGCCCACCGCCAAAGACAGCGCGAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp CTTCGCGCTGTCTTTGGCGGTGGGCTGCCTGAGCTGGTGGGTTCAGGCAAGGATGAGCAGGTCAGGGCCTaGTGCTGGGGCCAAGTTCTC +
Preference number: 4 (lower is better)
Translates to: LRAVFGGGLPELVGSGKDEQVRA*CWGQVL
Trigger: GAGAACTTGGCCCCAGCACCAGGCCCTGACCTGCTC...ATCCTTGCCTGAACCCACCAGCTCAGGCAGCCCACCGCCAAAGACAGCGCGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp CTTCGCGCTGTCTTTGGCGGTGGGCTGCCTGAGCTGGTGGGTTCAGGCAAGGATTCTGGATGGTGGCCCTaGGAACTCCACCGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: LRAVFGGGLPELVGSGKDSGWWP*ELHRAA
Trigger: TGCTGCCCGGTGGAGTTCCCAGGGCCACCATCCAGA...ATCCTTGCCTGAACCCACCAGCTCAGGCAGCCCACCGCCAAAGACAGCGCGAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp GGACGCCCTTCAGGCCCTCAGCATGTTGTAGCCACCTGTCCTGGGGCAGCGAGTGAGGCCCAGGCTTTCTaGATGGTGGCCCTGGGAACT +
Preference number: 4 (lower is better)
Translates to: GRPSGPQHVVATCPGAASEAQAF*MVALGT
Trigger: AGTTCCCAGGGCCACCATCCAGAAAGCCTGGGCCTC...ACTCGCTGCCCCAGGACAGGTGGCTACAACATGCTGAGGGCCTGAAGGGCGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp CCAGCCACCTTCTCCCTTCATGGTTCTGAATGTCGGGGTGCTGCACATGTGTTGGGGTCCCGCCAGCCCTaGCAGGGCGCACAGGGATGC +
Preference number: 4 (lower is better)
Translates to: PATFSLHGSECRGAAHVLGSRQP*QGAQGC
Trigger: GCATCCCTGTGCGCCCTGCCAGGGCTGGCGGGACCC...CAACACATGTGCAGCACCCCGACATTCAGAACCATGAAGGGAGAAGGTGGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp CTTCGCGCTGTCTTTGGCGGTGGGCTGCCTGAGCTGGTGGGTTCAGGCAAGGATCTGGAGGGCCACTTGTaGCTGGCACCCAAGGGTGCT +
Preference number: 4 (lower is better)
Translates to: LRAVFGGGLPELVGSGKDLEGHL*LAPKGA
Trigger: AGCACCCTTGGGTGCCAGCCACAAGTGGCCCTCCAG...ATCCTTGCCTGAACCCACCAGCTCAGGCAGCCCACCGCCAAAGACAGCGCGAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp CCTCAGCTACAGATCCTGTGCTGCCTTCTTCTCGAGCCAGGACAGCACAACTCAGTGCCCCAGCTGCGCTaGGGGCCCGCAGTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: PQLQILCCLLLEPGQHNSVPQLR*GPAVQQ
Trigger: CTGCTGCACTGCGGGCCCCCAGCGCAGCTGGGGCAC...TGAGTTGTGCTGTCCTGGCTCGAGAAGAAGGCAGCACAGGATCTGTAGCTGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423981.1
CDS-3UTR TCA 90 bp GGACGCCCTTCAGGCCCTCAGCATGTTGTAGCCACCTGTCCTGGGGCAGCGAGTCTGCTGCTGACGCACTaGGCGATTCACACTGTCCCA +
Preference number: 4 (lower is better)
Translates to: GRPSGPQHVVATCPGAASLLLTH*AIHTVP
Trigger: TGGGACAGTGTGAATCGCTCAGTGCGTCAGCAGCAG...ACTCGCTGCCCCAGGACAGGTGGCTACAACATGCTGAGGGCCTGAAGGGCGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp CTTCGCGCTGTCTTTGGCGGTGGGCTGCCTGAGCTGGTGGGTTCAGGCAAGGATCTGTGGGGCCTCTGTTaGCCTCCTGGAAGGACTGAC +
Preference number: 4 (lower is better)
Translates to: LRAVFGGGLPELVGSGKDLWGLC*PPGRTD
Trigger: GTCAGTCCTTCCAGGAGGGCAACAGAGGCCCCACAG...ATCCTTGCCTGAACCCACCAGCTCAGGCAGCCCACCGCCAAAGACAGCGCGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp GACAGCGTGGAGGGAGTGGAGTCAAAAGCCTTTGTTACTTGCAGGCAGAGCCGAGGCGGTAGTCGATCATaGGCCGGCTGCCCGGGGAGC +
Preference number: 4 (lower is better)
Translates to: DSVEGVESKAFVTCRQSRGGSRS*AGCPGS
Trigger: GCTCCCCGGGCAGCCGGCGCATGATCGACTACCGCC...TCGGCTCTGCCTGCAAGTAACAAAGGCTTTTGACTCCACTCCCTCCACGCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp AGCTGGTGGGTTCAGGCAAGGATGCCTCCACATGAACATGCTACCCTCTGCATGGGCGGTAGTCGATCATaGGCCGGCTGCCCGGGGAGC +
Preference number: 4 (lower is better)
Translates to: SWWVQARMPPHEHATLCMGGSRS*AGCPGS
Trigger: GCTCCCCGGGCAGCCGGCGCATGATCGACTACCGCC...CATGCAGAGGGTAGCATGTTCATGTGGAGGCATCCTTGCCTGAACCCACCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp CCAGCCACCTTCTCCCTTCATGGTTCTGAATGTCGGGGTGCTGCACATGTGTTGCCCCTCCGAGGGCCTTaGTCTCTCCGGCGAGCAGGC +
Preference number: 4 (lower is better)
Translates to: PATFSLHGSECRGAAHVLPLRGP*SLRRAG
Trigger: GCCTGCTCGCCGGAGAGAGCAAGGCCCTCGGAGGGG...CAACACATGTGCAGCACCCCGACATTCAGAACCATGAAGGGAGAAGGTGGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp CTTCGCGCTGTCTTTGGCGGTGGGCTGCCTGAGCTGGTGGGTTCAGGCAAGGATTCTTTGGCGGTGGGCTaGCTGAGCTGGTGGGTTCAG +
Preference number: 4 (lower is better)
Translates to: LRAVFGGGLPELVGSGKDSLAVG*LSWWVQ
Trigger: CTGAACCCACCAGCTCAGGCAGCCCACCGCCAAAGA...ATCCTTGCCTGAACCCACCAGCTCAGGCAGCCCACCGCCAAAGACAGCGCGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp CTTCGCGCTGTCTTTGGCGGTGGGCTGCCTGAGCTGGTGGGTTCAGGCAAGGATGGCTACTCCCTCAGGTaGAGCACAAAGCCCCAGGCT +
Preference number: 4 (lower is better)
Translates to: LRAVFGGGLPELVGSGKDGYSLR*STKPQA
Trigger: AGCCTGGGGCTTTGTGCTGCACCTGAGGGAGTAGCC...ATCCTTGCCTGAACCCACCAGCTCAGGCAGCCCACCGCCAAAGACAGCGCGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp GACAGCGTGGAGGGAGTGGAGTCAAAAGCCTTTGTTACTTGCAGGCAGAGCCGAGCTCCATGCTGCCAGTaGCCCAGCTGCGCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: DSVEGVESKAFVTCRQSRAPCCQ*PSCAGG
Trigger: GCCCCCAGCGCAGCTGGGGCACTGGCAGCATGGAGC...TCGGCTCTGCCTGCAAGTAACAAAGGCTTTTGACTCCACTCCCTCCACGCTGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423981.1
CDS-3UTR CCA 90 bp ATCTGGACGGGCCTGGTCAGAAGCCTTGCTGCACACTTTGGAACCTGTGATGTGGCCCTGTGGCAGCCGTaGCCCTGCCTGCCCCAGACA +
Preference number: 4 (lower is better)
Translates to: IWTGLVRSLAAHFGTCDVALWQP*PCLPQT
Trigger: TGTCTGGGGCAGGCAGGGCCACGGCTGCCACAGGGC...CACATCACAGGTTCCAAAGTGTGCAGCAAGGCTTCTGACCAGGCCCGTCCAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp GGACGCCCTTCAGGCCCTCAGCATGTTGTAGCCACCTGTCCTGGGGCAGCGAGTAGCCCTCGTCACTTGTaGACACGGATTCGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: GRPSGPQHVVATCPGAASSPRHL*TRIRAA
Trigger: AGCAGCCCGAATCCGTGTCCACAAGTGACGAGGGCT...ACTCGCTGCCCCAGGACAGGTGGCTACAACATGCTGAGGGCCTGAAGGGCGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp CTTCGCGCTGTCTTTGGCGGTGGGCTGCCTGAGCTGGTGGGTTCAGGCAAGGATACTGTAGCTGTCCCGTaGGAAGGTGGCGGCAGGAGT +
Preference number: 4 (lower is better)
Translates to: LRAVFGGGLPELVGSGKDTVAVP*EGGGRS
Trigger: ACTCCTGCCGCCACCTTCCCACGGGACAGCTACAGT...ATCCTTGCCTGAACCCACCAGCTCAGGCAGCCCACCGCCAAAGACAGCGCGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp CTTCGCGCTGTCTTTGGCGGTGGGCTGCCTGAGCTGGTGGGTTCAGGCAAGGATGCACAGGTCATCATCTaGGCTGGGGCCAAGAGGACC +
Preference number: 4 (lower is better)
Translates to: LRAVFGGGLPELVGSGKDAQVII*AGAKRT
Trigger: GGTCCTCTTGGCCCCAGCCCAGATGATGACCTGTGC...ATCCTTGCCTGAACCCACCAGCTCAGGCAGCCCACCGCCAAAGACAGCGCGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp CTTCGCGCTGTCTTTGGCGGTGGGCTGCCTGAGCTGGTGGGTTCAGGCAAGGATCTCGGAAGCTGCATATaGACAGTGGCGTCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: LRAVFGGGLPELVGSGKDLGSCI*TVASPG
Trigger: CCCTGGGGACGCCACTGTCCATATGCAGCTTCCGAG...ATCCTTGCCTGAACCCACCAGCTCAGGCAGCCCACCGCCAAAGACAGCGCGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp CTTCGCGCTGTCTTTGGCGGTGGGCTGCCTGAGCTGGTGGGTTCAGGCAAGGATGTGGGCTGCCTGAGCTaGTGGGTTCAGGCAAGGATG +
Preference number: 4 (lower is better)
Translates to: LRAVFGGGLPELVGSGKDVGCLS*WVQARM
Trigger: CATCCTTGCCTGAACCCACCAGCTCAGGCAGCCCAC...ATCCTTGCCTGAACCCACCAGCTCAGGCAGCCCACCGCCAAAGACAGCGCGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp CTTCGCGCTGTCTTTGGCGGTGGGCTGCCTGAGCTGGTGGGTTCAGGCAAGGATAGGAGGGCTCAGATGTaGCTCCACAGGGGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: LRAVFGGGLPELVGSGKDRRAQM*LHRGSR
Trigger: TCTGGAGCCCCTGTGGAGCCACATCTGAGCCCTCCT...ATCCTTGCCTGAACCCACCAGCTCAGGCAGCCCACCGCCAAAGACAGCGCGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR TCA 90 bp AGCTGGTGGGTTCAGGCAAGGATGCCTCCACATGAACATGCTACCCTCTGCATGCGGTGGGCTCCACCCTaGGCCAGCTCAGGTCCTGGA +
Preference number: 4 (lower is better)
Translates to: SWWVQARMPPHEHATLCMRWAPP*ASSGPG
Trigger: TCCAGGACCTGAGCTGGCTCAGGGTGGAGCCCACCG...CATGCAGAGGGTAGCATGTTCATGTGGAGGCATCCTTGCCTGAACCCACCAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR TCA 90 bp GGACGCCCTTCAGGCCCTCAGCATGTTGTAGCCACCTGTCCTGGGGCAGCGAGTAGTTCCTGGTGCATGTaGGCCTGTCCTACAGATGGG +
Preference number: 4 (lower is better)
Translates to: GRPSGPQHVVATCPGAASSSWCM*ACPTDG
Trigger: CCCATCTGTAGGACAGGCTCACATGCACCAGGAACT...ACTCGCTGCCCCAGGACAGGTGGCTACAACATGCTGAGGGCCTGAAGGGCGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR TCA 90 bp GGACGCCCTTCAGGCCCTCAGCATGTTGTAGCCACCTGTCCTGGGGCAGCGAGTGTAATACAATGTTCCTaGGGGGACGCCCTTCAGGCC +
Preference number: 4 (lower is better)
Translates to: GRPSGPQHVVATCPGAASVIQCS*GDALQA
Trigger: GGCCTGAAGGGCGTCCCCTCAGGAACATTGTATTAC...ACTCGCTGCCCCAGGACAGGTGGCTACAACATGCTGAGGGCCTGAAGGGCGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR TCA 90 bp CCTCAGCTACAGATCCTGTGCTGCCTTCTTCTCGAGCCAGGACAGCACAACTCACTGCACCTGCTGGCCTaGCACTGGCCCAGGACGGAC +
Preference number: 4 (lower is better)
Translates to: PQLQILCCLLLEPGQHNSLHLLA*HWPRTD
Trigger: GTCCGTCCTGGGCCAGTGTCAGGCCAGCAGGTGCAG...TGAGTTGTGCTGTCCTGGCTCGAGAAGAAGGCAGCACAGGATCTGTAGCTGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR TCA 90 bp TCCTGTGCTGCCTTCTTCTCGAGCCAGGACAGCACAACTCACGCTCCTCTTGGTAGTCAGGAGAGGCACTaGCCAGCGTCCCCTGGTGGG +
Preference number: 4 (lower is better)
Translates to: SCAAFFSSQDSTTHAPLGSQERH*PASPGG
Trigger: CCCACCAGGGGACGCTGGTCAGTGCCTCTCCTGACT...ACCAAGAGGAGCGTGAGTTGTGCTGTCCTGGCTCGAGAAGAAGGCAGCACAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp GGACGCCCTTCAGGCCCTCAGCATGTTGTAGCCACCTGTCCTGGGGCAGCGAGTTGCCTGCCCCAGACATaGTGTCGTGAGTCTTGCACT +
Preference number: 4 (lower is better)
Translates to: GRPSGPQHVVATCPGAASCLPQT*CRESCT
Trigger: AGTGCAAGACTCACGACAGCATGTCTGGGGCAGGCA...ACTCGCTGCCCCAGGACAGGTGGCTACAACATGCTGAGGGCCTGAAGGGCGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp TCCTGTGCTGCCTTCTTCTCGAGCCAGGACAGCACAACTCACGCTCCTCTTGGTCCGGGAAGCTTGCACTaGCCACCAGCTGCCCTGTGG +
Preference number: 4 (lower is better)
Translates to: SCAAFFSSQDSTTHAPLGPGSLH*PPAALW
Trigger: CCACAGGGCAGCTGGTGGGCAGTGCAAGCTTCCCGG...ACCAAGAGGAGCGTGAGTTGTGCTGTCCTGGCTCGAGAAGAAGGCAGCACAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp TGCCAAGTTGACAAGGGGTGGACCTGTGGACTTCATTTTGGGTGTGAACTCGACCGATCATGCGCCGGCTaGCCGGGGAGCCCGGGAAGC +
Preference number: 4 (lower is better)
Translates to: CQVDKGWTCGLHFGCELDRSCAG*PGSPGS
Trigger: GCTTCCCGGGCTCCCCGGGCAGCCGGCGCATGATCG...GTCGAGTTCACACCCAAAATGAAGTCCACAGGTCCACCCCTTGTCAACTTGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp CTTCGCGCTGTCTTTGGCGGTGGGCTGCCTGAGCTGGTGGGTTCAGGCAAGGATTCCTCTTCCTCGGGATaGTCTTGGCCACAGCTGGCA +
Preference number: 4 (lower is better)
Translates to: LRAVFGGGLPELVGSGKDSSSSG*SWPQLA
Trigger: TGCCAGCTGTGGCCAAGAGCATCCCGAGGAAGAGGA...ATCCTTGCCTGAACCCACCAGCTCAGGCAGCCCACCGCCAAAGACAGCGCGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp GGACGCCCTTCAGGCCCTCAGCATGTTGTAGCCACCTGTCCTGGGGCAGCGAGTTCAGCAGGCACTCCTTaGCCTTCCAGGAGCTCTGTA +
Preference number: 4 (lower is better)
Translates to: GRPSGPQHVVATCPGAASSAGTP*PSRSSV
Trigger: TACAGAGCTCCTGGAAGGGCAAGGAGTGCCTGCTGA...ACTCGCTGCCCCAGGACAGGTGGCTACAACATGCTGAGGGCCTGAAGGGCGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp AGCTGGTGGGTTCAGGCAAGGATGCCTCCACATGAACATGCTACCCTCTGCATGCGAGCAGGCCTGTGGTaGCCGGGTGTGCCCACAGCT +
Preference number: 4 (lower is better)
Translates to: SWWVQARMPPHEHATLCMRAGLW*PGVPTA
Trigger: AGCTGTGGGCACACCCGGGCACCACAGGCCTGCTCG...CATGCAGAGGGTAGCATGTTCATGTGGAGGCATCCTTGCCTGAACCCACCAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp GGACGCCCTTCAGGCCCTCAGCATGTTGTAGCCACCTGTCCTGGGGCAGCGAGTTCATGCTGGGGGAGCTaGTGGACTGTTTCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: GRPSGPQHVVATCPGAASSCWGS*WTVSAP
Trigger: TGGAGCAGAAACAGTCCAGCAGCTCCCCCAGCATGA...ACTCGCTGCCCCAGGACAGGTGGCTACAACATGCTGAGGGCCTGAAGGGCGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp CTTCGCGCTGTCTTTGGCGGTGGGCTGCCTGAGCTGGTGGGTTCAGGCAAGGATCATGGATGGTGGTCATaGTGGGGGAGCTGCTGGACT +
Preference number: 4 (lower is better)
Translates to: LRAVFGGGLPELVGSGKDHGWWS*WGSCWT
Trigger: AGTCCAGCAGCTCCCCCAGCATGACCACCATCCATG...ATCCTTGCCTGAACCCACCAGCTCAGGCAGCCCACCGCCAAAGACAGCGCGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp TCCTGTGCTGCCTTCTTCTCGAGCCAGGACAGCACAACTCACGCTCCTCTTGGTCAGCTGGCTGCCGTGTaGCACCTGCTCCACAGCCTC +
Preference number: 4 (lower is better)
Translates to: SCAAFFSSQDSTTHAPLGQLAAV*HLLHSL
Trigger: GAGGCTGTGGAGCAGGTGGCACACGGCAGCCAGCTG...ACCAAGAGGAGCGTGAGTTGTGCTGTCCTGGCTCGAGAAGAAGGCAGCACAGGA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp GGACGCCCTTCAGGCCCTCAGCATGTTGTAGCCACCTGTCCTGGGGCAGCGAGTGAACATGCTACCCTCTaGATGCCTGAGTCCTGCCAC +
Preference number: 4 (lower is better)
Translates to: GRPSGPQHVVATCPGAASEHATL*MPESCH
Trigger: GTGGCAGGACTCAGGCATGCAGAGGGTAGCATGTTC...ACTCGCTGCCCCAGGACAGGTGGCTACAACATGCTGAGGGCCTGAAGGGCGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp GGACGCCCTTCAGGCCCTCAGCATGTTGTAGCCACCTGTCCTGGGGCAGCGAGTGAATCTGGTGAAACTTaGCCCCAGCTCGGCTCAGTG +
Preference number: 4 (lower is better)
Translates to: GRPSGPQHVVATCPGAASESGET*PQLGSV
Trigger: CACTGAGCCGAGCTGGGGGCAAGTTTCACCAGATTC...ACTCGCTGCCCCAGGACAGGTGGCTACAACATGCTGAGGGCCTGAAGGGCGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp TCCTGTGCTGCCTTCTTCTCGAGCCAGGACAGCACAACTCACGCTCCTCTTGGTCCTGGGTGCTCAGCCTaGTGGAGGGCCACTTGTGGC +
Preference number: 4 (lower is better)
Translates to: SCAAFFSSQDSTTHAPLGPGCSA*WRATCG
Trigger: GCCACAAGTGGCCCTCCAGCAGGCTGAGCACCCAGG...ACCAAGAGGAGCGTGAGTTGTGCTGTCCTGGCTCGAGAAGAAGGCAGCACAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp TCCTGTGCTGCCTTCTTCTCGAGCCAGGACAGCACAACTCACGCTCCTCTTGGTCGATGGAGCTGGCTTTaGAGCCGCTGCGAGGGTCCC +
Preference number: 4 (lower is better)
Translates to: SCAAFFSSQDSTTHAPLGRWSWL*SRCEGP
Trigger: GGGACCCTCGCAGCGGCTCCAAAGCCAGCTCCATCG...ACCAAGAGGAGCGTGAGTTGTGCTGTCCTGGCTCGAGAAGAAGGCAGCACAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp CCAGCCACCTTCTCCCTTCATGGTTCTGAATGTCGGGGTGCTGCACATGTGTTGGCTGCATATGGACAGTaGCGTCCCCAGGGCCGGCCC +
Preference number: 4 (lower is better)
Translates to: PATFSLHGSECRGAAHVLAAYGQ*RPQGRP
Trigger: GGGCCGGCCCTGGGGACGCCACTGTCCATATGCAGC...CAACACATGTGCAGCACCCCGACATTCAGAACCATGAAGGGAGAAGGTGGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp CTTCGCGCTGTCTTTGGCGGTGGGCTGCCTGAGCTGGTGGGTTCAGGCAAGGATCTCGAGAGGCATCCCTaGACAGTGTGCCAGTCCCTT +
Preference number: 4 (lower is better)
Translates to: LRAVFGGGLPELVGSGKDLERHP*TVCQSL
Trigger: AAGGGACTGGCACACTGTCCAGGGATGCCTCTCGAG...ATCCTTGCCTGAACCCACCAGCTCAGGCAGCCCACCGCCAAAGACAGCGCGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp TCCTGTGCTGCCTTCTTCTCGAGCCAGGACAGCACAACTCACGCTCCTCTTGGTGTCACCTCCGTGACCTaGCCTCCAGGGGCCTCGGAA +
Preference number: 4 (lower is better)
Translates to: SCAAFFSSQDSTTHAPLGVTSVT*PPGASE
Trigger: TTCCGAGGCCCCTGGAGGCCAGGTCACGGAGGTGAC...ACCAAGAGGAGCGTGAGTTGTGCTGTCCTGGCTCGAGAAGAAGGCAGCACAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp CCAGCCACCTTCTCCCTTCATGGTTCTGAATGTCGGGGTGCTGCACATGTGTTGGCCCATGTCTTGCCTTaGAGGCCATGCGGCCGGGGG +
Preference number: 4 (lower is better)
Translates to: PATFSLHGSECRGAAHVLAHVLP*RPCGRG
Trigger: CCCCCGGCCGCATGGCCTCCAAGGCAAGACATGGGC...CAACACATGTGCAGCACCCCGACATTCAGAACCATGAAGGGAGAAGGTGGCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp CTTCGCGCTGTCTTTGGCGGTGGGCTGCCTGAGCTGGTGGGTTCAGGCAAGGATCGATCTCGACACCTCTaGTCCTGTGTGCTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: LRAVFGGGLPELVGSGKDRSRHL*SCVLAE
Trigger: CTCAGCCAGCACACAGGACCAGAGGTGTCGAGATCG...ATCCTTGCCTGAACCCACCAGCTCAGGCAGCCCACCGCCAAAGACAGCGCGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp CTTCGCGCTGTCTTTGGCGGTGGGCTGCCTGAGCTGGTGGGTTCAGGCAAGGATAGCCAGCTCAGGTCCTaGACACGATCTCGACACCTC +
Preference number: 4 (lower is better)
Translates to: LRAVFGGGLPELVGSGKDSQLRS*TRSRHL
Trigger: GAGGTGTCGAGATCGTGTCCAGGACCTGAGCTGGCT...ATCCTTGCCTGAACCCACCAGCTCAGGCAGCCCACCGCCAAAGACAGCGCGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp ATCTGGACGGGCCTGGTCAGAAGCCTTGCTGCACACTTTGGAACCTGTGATGTGACAGAGGCCCAGGCCTaGACACCTAGCCCGGTGGGC +
Preference number: 4 (lower is better)
Translates to: IWTGLVRSLAAHFGTCDVTEAQA*TPSPVG
Trigger: GCCCACCGGGCTAGGTGTCCAGGCCTGGGCCTCTGT...CACATCACAGGTTCCAAAGTGTGCAGCAAGGCTTCTGACCAGGCCCGTCCAGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp ATCTGGACGGGCCTGGTCAGAAGCCTTGCTGCACACTTTGGAACCTGTGATGTGGGGCTCAGCCATGGCTaGCCCAGAGGCCCCCACTTC +
Preference number: 4 (lower is better)
Translates to: IWTGLVRSLAAHFGTCDVGLSHG*PRGPHF
Trigger: GAAGTGGGGGCCTCTGGGCCAGCCATGGCTGAGCCC...CACATCACAGGTTCCAAAGTGTGCAGCAAGGCTTCTGACCAGGCCCGTCCAGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp ATCTGGACGGGCCTGGTCAGAAGCCTTGCTGCACACTTTGGAACCTGTGATGTGGATGGGGCTCAGCCATaGCTGGCCCAGAGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: IWTGLVRSLAAHFGTCDVDGAQP*LAQRPP
Trigger: TGGGGGCCTCTGGGCCAGCCATGGCTGAGCCCCATC...CACATCACAGGTTCCAAAGTGTGCAGCAAGGCTTCTGACCAGGCCCGTCCAGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp TGCCAAGTTGACAAGGGGTGGACCTGTGGACTTCATTTTGGGTGTGAACTCGACGGGTCCCGCCAGCCCTaGCAGGGCGCACAGGGATGC +
Preference number: 4 (lower is better)
Translates to: CQVDKGWTCGLHFGCELDGSRQP*QGAQGC
Trigger: GCATCCCTGTGCGCCCTGCCAGGGCTGGCGGGACCC...GTCGAGTTCACACCCAAAATGAAGTCCACAGGTCCACCCCTTGTCAACTTGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp CCAGCCACCTTCTCCCTTCATGGTTCTGAATGTCGGGGTGCTGCACATGTGTTGCTGACCAGCGTCCCCTaGTGGGAGGGCCACCCTCAG +
Preference number: 4 (lower is better)
Translates to: PATFSLHGSECRGAAHVLLTSVP*WEGHPQ
Trigger: CTGAGGGTGGCCCTCCCACCAGGGGACGCTGGTCAG...CAACACATGTGCAGCACCCCGACATTCAGAACCATGAAGGGAGAAGGTGGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR TCA 90 bp TCCTGTGCTGCCTTCTTCTCGAGCCAGGACAGCACAACTCACGCTCCTCTTGGTCCTCCCCACAACCCGTaGGCGAGTCGAAGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: SCAAFFSSQDSTTHAPLGPPHNP*ASRSSG
Trigger: TCCAGAGCTTCGACTCGCTCACGGGTTGTGGGGAGG...ACCAAGAGGAGCGTGAGTTGTGCTGTCCTGGCTCGAGAAGAAGGCAGCACAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR TCA 90 bp CCTCAGCTACAGATCCTGTGCTGCCTTCTTCTCGAGCCAGGACAGCACAACTCATTGCTCTCCAGGCCCTaGGCAGCCTGGGTTGGGCTC +
Preference number: 4 (lower is better)
Translates to: PQLQILCCLLLEPGQHNSLLSRP*AAWVGL
Trigger: GAGCCCAACCCAGGCTGCTCAGGGCCTGGAGAGCAA...TGAGTTGTGCTGTCCTGGCTCGAGAAGAAGGCAGCACAGGATCTGTAGCTGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR TCA 90 bp ATCTGGACGGGCCTGGTCAGAAGCCTTGCTGCACACTTTGGAACCTGTGATGTGTGGCGGTGGGCTGCCTaGGCTGGTGGGTTCAGGCAA +
Preference number: 4 (lower is better)
Translates to: IWTGLVRSLAAHFGTCDVWRWAA*AGGFRQ
Trigger: TTGCCTGAACCCACCAGCTCAGGCAGCCCACCGCCA...CACATCACAGGTTCCAAAGTGTGCAGCAAGGCTTCTGACCAGGCCCGTCCAGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR TCA 90 bp CCAGCCACCTTCTCCCTTCATGGTTCTGAATGTCGGGGTGCTGCACATGTGTTGAGTCAGGAGAGGCACTaGCCAGCGTCCCCTGGTGGG +
Preference number: 4 (lower is better)
Translates to: PATFSLHGSECRGAAHVLSQERH*PASPGG
Trigger: CCCACCAGGGGACGCTGGTCAGTGCCTCTCCTGACT...CAACACATGTGCAGCACCCCGACATTCAGAACCATGAAGGGAGAAGGTGGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp CCTCAGCTACAGATCCTGTGCTGCCTTCTTCTCGAGCCAGGACAGCACAACTCAGGCTGCAGCCACGGCTaGTGGGTCTGGGGGTTTCTC +
Preference number: 4 (lower is better)
Translates to: PQLQILCCLLLEPGQHNSGCSHG*WVWGFL
Trigger: GAGAAACCCCCAGACCCAGCAGCCGTGGCTGCAGCC...TGAGTTGTGCTGTCCTGGCTCGAGAAGAAGGCAGCACAGGATCTGTAGCTGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp ATCTGGACGGGCCTGGTCAGAAGCCTTGCTGCACACTTTGGAACCTGTGATGTGCCGGGAAGCTTGCACTaGCCACCAGCTGCCCTGTGG +
Preference number: 4 (lower is better)
Translates to: IWTGLVRSLAAHFGTCDVPGSLH*PPAALW
Trigger: CCACAGGGCAGCTGGTGGGCAGTGCAAGCTTCCCGG...CACATCACAGGTTCCAAAGTGTGCAGCAAGGCTTCTGACCAGGCCCGTCCAGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp GCTGAGGCCCAGGGAGAACAAATAAAGAAGGCAAACTGGTCTCTCTCTCAGAGCCGCTGCGAGGGTCCCTaGAGGGGCAGAGGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: AEAQGEQIKKANWSLSQSRCEGP*RGRGAA
Trigger: AGCTGCCCCTCTGCCCCTGCAGGGACCCTCGCAGCG...GCTCTGAGAGAGAGACCAGTTTGCCTTCTTTATTTGTTCTCCCTGGGCCTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp TCCTGTGCTGCCTTCTTCTCGAGCCAGGACAGCACAACTCACGCTCCTCTTGGTAGGTGGCGGCAGGAGTaGCTGGGCTCTCAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: SCAAFFSSQDSTTHAPLGRWRQE*LGSQLP
Trigger: AGGAAGCTGAGAGCCCAGGCACTCCTGCCGCCACCT...ACCAAGAGGAGCGTGAGTTGTGCTGTCCTGGCTCGAGAAGAAGGCAGCACAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp TCCTGTGCTGCCTTCTTCTCGAGCCAGGACAGCACAACTCACGCTCCTCTTGGTCAGGTCAGGGCCTGGTaGTGGGGCCAAGTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: SCAAFFSSQDSTTHAPLGQVRAW*WGQVLL
Trigger: GAGGAGAACTTGGCCCCAGCACCAGGCCCTGACCTG...ACCAAGAGGAGCGTGAGTTGTGCTGTCCTGGCTCGAGAAGAAGGCAGCACAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp TCCTGTGCTGCCTTCTTCTCGAGCCAGGACAGCACAACTCACGCTCCTCTTGGTGCTGATCTTCAGGGCTaGCACACGGGCCACACAGCC +
Preference number: 4 (lower is better)
Translates to: SCAAFFSSQDSTTHAPLGADLQG*HTGHTA
Trigger: GGCTGTGTGGCCCGTGTGGCAGCCCTGAAGATCAGC...ACCAAGAGGAGCGTGAGTTGTGCTGTCCTGGCTCGAGAAGAAGGCAGCACAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp CCAGCCACCTTCTCCCTTCATGGTTCTGAATGTCGGGGTGCTGCACATGTGTTGCAGCTGGCTGCCGTGTaGCACCTGCTCCACAGCCTC +
Preference number: 4 (lower is better)
Translates to: PATFSLHGSECRGAAHVLQLAAV*HLLHSL
Trigger: GAGGCTGTGGAGCAGGTGGCACACGGCAGCCAGCTG...CAACACATGTGCAGCACCCCGACATTCAGAACCATGAAGGGAGAAGGTGGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp TCCTGTGCTGCCTTCTTCTCGAGCCAGGACAGCACAACTCACGCTCCTCTTGGTCGTCCTGAGCCACCCTaGCGGCATCCCAGGTTGACT +
Preference number: 4 (lower is better)
Translates to: SCAAFFSSQDSTTHAPLGRPEPP*RHPRLT
Trigger: AGTCAACCTGGGATGCCGGCAGGGTGGCTCAGGACG...ACCAAGAGGAGCGTGAGTTGTGCTGTCCTGGCTCGAGAAGAAGGCAGCACAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp CCAGCCACCTTCTCCCTTCATGGTTCTGAATGTCGGGGTGCTGCACATGTGTTGAGGGGTCTGCACGCGTaGTTCAGTGCCTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: PATFSLHGSECRGAAHVLRGLHA*FSAWGW
Trigger: CCAGCCCCAGGCACTGAACCACGCGTGCAGACCCCT...CAACACATGTGCAGCACCCCGACATTCAGAACCATGAAGGGAGAAGGTGGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000321420.5
CDS-3UTR CCA 90 bp CCTCAGCTACAGATCCTGTGCTGCCTTCTTCTCGAGCCAGGACAGCACAACTCAGCACTGGGGCTGGCTTaGGGGCCCTTCTCACTGTGG +
Preference number: 4 (lower is better)
Translates to: PQLQILCCLLLEPGQHNSALGLA*GPFSLW
Trigger: CCACAGTGAGAAGGGCCCCCAAGCCAGCCCCAGTGC...TGAGTTGTGCTGTCCTGGCTCGAGAAGAAGGCAGCACAGGATCTGTAGCTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp CCTCAGCTACAGATCCTGTGCTGCCTTCTTCTCGAGCCAGGACAGCACAACTCACTTGGGCACTGGGGCTaGCTTGGGGGCCCTTCTCAC +
Preference number: 4 (lower is better)
Translates to: PQLQILCCLLLEPGQHNSLGHWG*LGGPSH
Trigger: GTGAGAAGGGCCCCCAAGCCAGCCCCAGTGCCCAAG...TGAGTTGTGCTGTCCTGGCTCGAGAAGAAGGCAGCACAGGATCTGTAGCTGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp ATCTGGACGGGCCTGGTCAGAAGCCTTGCTGCACACTTTGGAACCTGTGATGTGCTGTCCAACAGGTCCTaGCACAGGCCGTCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: IWTGLVRSLAAHFGTCDVLSNRS*HRPSSP
Trigger: GGGGCTGGACGGCCTGTGCCAGGACCTGTTGGACAG...CACATCACAGGTTCCAAAGTGTGCAGCAAGGCTTCTGACCAGGCCCGTCCAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp GACAGCGTGGAGGGAGTGGAGTCAAAAGCCTTTGTTACTTGCAGGCAGAGCCGACTGAGCAGCCTGGGTTaGGCTCTCCGGGCCCTCGTT +
Preference number: 4 (lower is better)
Translates to: DSVEGVESKAFVTCRQSRLSSLG*ALRALV
Trigger: AACGAGGGCCCGGAGAGCCCAACCCAGGCTGCTCAG...TCGGCTCTGCCTGCAAGTAACAAAGGCTTTTGACTCCACTCCCTCCACGCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp GACAGCGTGGAGGGAGTGGAGTCAAAAGCCTTTGTTACTTGCAGGCAGAGCCGATGCTCCACACTGCCCTaGAGAGGGCCCCTGGGAACC +
Preference number: 4 (lower is better)
Translates to: DSVEGVESKAFVTCRQSRCSTLP*RGPLGT
Trigger: GGTTCCCAGGGGCCCTCTCCAGGGCAGTGTGGAGCA...TCGGCTCTGCCTGCAAGTAACAAAGGCTTTTGACTCCACTCCCTCCACGCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp CCTCAGCTACAGATCCTGTGCTGCCTTCTTCTCGAGCCAGGACAGCACAACTCATCCCTGTCTGTCCCCTaGGGGCCTGAAAGCCACGGG +
Preference number: 4 (lower is better)
Translates to: PQLQILCCLLLEPGQHNSSLSVP*GPESHG
Trigger: CCCGTGGCTTTCAGGCCCCCAGGGGACAGACAGGGA...TGAGTTGTGCTGTCCTGGCTCGAGAAGAAGGCAGCACAGGATCTGTAGCTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp GACAGCGTGGAGGGAGTGGAGTCAAAAGCCTTTGTTACTTGCAGGCAGAGCCGACGGGCTGCTCGCTCTTaGGGGTGCCTGTGTCGATGG +
Preference number: 4 (lower is better)
Translates to: DSVEGVESKAFVTCRQSRRAARS*GCLCRW
Trigger: CCATCGACACAGGCACCCCCAAGAGCGAGCAGCCCG...TCGGCTCTGCCTGCAAGTAACAAAGGCTTTTGACTCCACTCCCTCCACGCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp GACAGCGTGGAGGGAGTGGAGTCAAAAGCCTTTGTTACTTGCAGGCAGAGCCGAGTCAGGGCCTGGTGCTaGGGCCAAGTTCTCCTCGGC +
Preference number: 4 (lower is better)
Translates to: DSVEGVESKAFVTCRQSRVRAWC*GQVLLG
Trigger: GCCGAGGAGAACTTGGCCCCAGCACCAGGCCCTGAC...TCGGCTCTGCCTGCAAGTAACAAAGGCTTTTGACTCCACTCCCTCCACGCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp GCTGAGGCCCAGGGAGAACAAATAAAGAAGGCAAACTGGTCTCTCTCTCAGAGCCGGCGAGCAGGCCTGTaGTGCCCGGGTGTGCCCACA +
Preference number: 4 (lower is better)
Translates to: AEAQGEQIKKANWSLSQSRRAGL*CPGVPT
Trigger: TGTGGGCACACCCGGGCACCACAGGCCTGCTCGCCG...GCTCTGAGAGAGAGACCAGTTTGCCTTCTTTATTTGTTCTCCCTGGGCCTCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp ATCTGGACGGGCCTGGTCAGAAGCCTTGCTGCACACTTTGGAACCTGTGATGTGTGCCAGTCCCTTGTGTaGCCCCTCCGAGGGCCTTGC +
Preference number: 4 (lower is better)
Translates to: IWTGLVRSLAAHFGTCDVCQSLV*PLRGPC
Trigger: GCAAGGCCCTCGGAGGGGCCACACAAGGGACTGGCA...CACATCACAGGTTCCAAAGTGTGCAGCAAGGCTTCTGACCAGGCCCGTCCAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp AGCTGGTGGGTTCAGGCAAGGATGCCTCCACATGAACATGCTACCCTCTGCATGGCCCCCACTTCTGGCTaGCCACAGAGGAGGCCCTCA +
Preference number: 4 (lower is better)
Translates to: SWWVQARMPPHEHATLCMAPTSG*PQRRPS
Trigger: TGAGGGCCTCCTCTGTGGCCAGCCAGAAGTGGGGGC...CATGCAGAGGGTAGCATGTTCATGTGGAGGCATCCTTGCCTGAACCCACCAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp CCAGCCACCTTCTCCCTTCATGGTTCTGAATGTCGGGGTGCTGCACATGTGTTGGCCCCCACTTCTGGCTaGCCACAGAGGAGGCCCTCA +
Preference number: 4 (lower is better)
Translates to: PATFSLHGSECRGAAHVLAPTSG*PQRRPS
Trigger: TGAGGGCCTCCTCTGTGGCCAGCCAGAAGTGGGGGC...CAACACATGTGCAGCACCCCGACATTCAGAACCATGAAGGGAGAAGGTGGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp AGCTGGTGGGTTCAGGCAAGGATGCCTCCACATGAACATGCTACCCTCTGCATGACCAGCGTCCCCTGGTaGGAGGGCCACCCTCAGCTA +
Preference number: 4 (lower is better)
Translates to: SWWVQARMPPHEHATLCMTSVPW*EGHPQL
Trigger: TAGCTGAGGGTGGCCCTCCCACCAGGGGACGCTGGT...CATGCAGAGGGTAGCATGTTCATGTGGAGGCATCCTTGCCTGAACCCACCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp GACAGCGTGGAGGGAGTGGAGTCAAAAGCCTTTGTTACTTGCAGGCAGAGCCGAGGGTGCTCAGCCTGCTaGAGGGCCACTTGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: DSVEGVESKAFVTCRQSRGCSAC*RATCGW
Trigger: CCAGCCACAAGTGGCCCTCCAGCAGGCTGAGCACCC...TCGGCTCTGCCTGCAAGTAACAAAGGCTTTTGACTCCACTCCCTCCACGCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp ATCTGGACGGGCCTGGTCAGAAGCCTTGCTGCACACTTTGGAACCTGTGATGTGGGGTGCTCAGCCTGCTaGAGGGCCACTTGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: IWTGLVRSLAAHFGTCDVGCSAC*RATCGW
Trigger: CCAGCCACAAGTGGCCCTCCAGCAGGCTGAGCACCC...CACATCACAGGTTCCAAAGTGTGCAGCAAGGCTTCTGACCAGGCCCGTCCAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR TCA 90 bp ATCTGGACGGGCCTGGTCAGAAGCCTTGCTGCACACTTTGGAACCTGTGATGTGCTGTCTCCGCAGAACTaGGGACGAGGGGTCTGCACG +
Preference number: 4 (lower is better)
Translates to: IWTGLVRSLAAHFGTCDVLSPQN*GRGVCT
Trigger: CGTGCAGACCCCTCGTCCTCAGTTCTGCGGAGACAG...CACATCACAGGTTCCAAAGTGTGCAGCAAGGCTTCTGACCAGGCCCGTCCAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321420.5
CDS-3UTR TCA 90 bp TCCTGTGCTGCCTTCTTCTCGAGCCAGGACAGCACAACTCACGCTCCTCTTGGTAGGGCACGCTGCTGCTaGCGCACTGAGCGATTCACA +
Preference number: 4 (lower is better)
Translates to: SCAAFFSSQDSTTHAPLGRARCC*RTERFT
Trigger: TGTGAATCGCTCAGTGCGTCAGCAGCAGCGTGCCCT...ACCAAGAGGAGCGTGAGTTGTGCTGTCCTGGCTCGAGAAGAAGGCAGCACAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR TCA 90 bp CTAGGTGTGGAAGATCCACCCTCAATGTTGGTGGGCAGCATTCAATCTGCTGAGCCCCAGGGCCGGCCCTaGCAGACTCTCAGACACGCA +
Preference number: 4 (lower is better)
Translates to: LGVEDPPSMLVGSIQSAEPQGRP*QTLRHA
Trigger: TGCGTGTCTGAGAGTCTGTCAGGGCCGGCCCTGGGG...CTCAGCAGATTGAATGCTGCCCACCAACATTGAGGGTGGATCTTCCACACCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR TCA 90 bp GACAGCGTGGAGGGAGTGGAGTCAAAAGCCTTTGTTACTTGCAGGCAGAGCCGAGCGCACAGGGATGCATaGTGCTGGCTGGCTCACTCC +
Preference number: 4 (lower is better)
Translates to: DSVEGVESKAFVTCRQSRAHRDA*CWLAHS
Trigger: GGAGTGAGCCAGCCAGCATCATGCATCCCTGTGCGC...TCGGCTCTGCCTGCAAGTAACAAAGGCTTTTGACTCCACTCCCTCCACGCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR TCA 90 bp GCTGAGGCCCAGGGAGAACAAATAAAGAAGGCAAACTGGTCTCTCTCTCAGAGCCTGCACCTGCTGGCCTaGCACTGGCCCAGGACGGAC +
Preference number: 4 (lower is better)
Translates to: AEAQGEQIKKANWSLSQSLHLLA*HWPRTD
Trigger: GTCCGTCCTGGGCCAGTGTCAGGCCAGCAGGTGCAG...GCTCTGAGAGAGAGACCAGTTTGCCTTCTTTATTTGTTCTCCCTGGGCCTCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp TCCTGTGCTGCCTTCTTCTCGAGCCAGGACAGCACAACTCACGCTCCTCTTGGTCTGTGGGGCCTCTGTTaGCCTCCTGGAAGGACTGAC +
Preference number: 4 (lower is better)
Translates to: SCAAFFSSQDSTTHAPLGLWGLC*PPGRTD
Trigger: GTCAGTCCTTCCAGGAGGGCAACAGAGGCCCCACAG...ACCAAGAGGAGCGTGAGTTGTGCTGTCCTGGCTCGAGAAGAAGGCAGCACAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp TGCCAAGTTGACAAGGGGTGGACCTGTGGACTTCATTTTGGGTGTGAACTCGACGGAGCCCGGGAAGCTTaGACTGCCCACCAGCTGCCC +
Preference number: 4 (lower is better)
Translates to: CQVDKGWTCGLHFGCELDGAREA*TAHQLP
Trigger: GGGCAGCTGGTGGGCAGTGCAAGCTTCCCGGGCTCC...GTCGAGTTCACACCCAAAATGAAGTCCACAGGTCCACCCCTTGTCAACTTGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp GACAGCGTGGAGGGAGTGGAGTCAAAAGCCTTTGTTACTTGCAGGCAGAGCCGAGCTCGCTCTTGGGGGTaGCTGTGTCGATGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: DSVEGVESKAFVTCRQSRARSWG*LCRWSW
Trigger: CCAGCTCCATCGACACAGGCACCCCCAAGAGCGAGC...TCGGCTCTGCCTGCAAGTAACAAAGGCTTTTGACTCCACTCCCTCCACGCTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp CCTCAGCTACAGATCCTGTGCTGCCTTCTTCTCGAGCCAGGACAGCACAACTCAGCTCGCTCTTGGGGGTaGCTGTGTCGATGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: PQLQILCCLLLEPGQHNSARSWG*LCRWSW
Trigger: CCAGCTCCATCGACACAGGCACCCCCAAGAGCGAGC...TGAGTTGTGCTGTCCTGGCTCGAGAAGAAGGCAGCACAGGATCTGTAGCTGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp CCAGCCACCTTCTCCCTTCATGGTTCTGAATGTCGGGGTGCTGCACATGTGTTGGACACGGATTCGGGCTaGTCGCTCTTGGGGGTGCCT +
Preference number: 4 (lower is better)
Translates to: PATFSLHGSECRGAAHVLDTDSG*SLLGVP
Trigger: AGGCACCCCCAAGAGCGAGCAGCCCGAATCCGTGTC...CAACACATGTGCAGCACCCCGACATTCAGAACCATGAAGGGAGAAGGTGGCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp CCAGCCACCTTCTCCCTTCATGGTTCTGAATGTCGGGGTGCTGCACATGTGTTGCAGGTCAGGGCCTGGTaGTGGGGCCAAGTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: PATFSLHGSECRGAAHVLQVRAW*WGQVLL
Trigger: GAGGAGAACTTGGCCCCAGCACCAGGCCCTGACCTG...CAACACATGTGCAGCACCCCGACATTCAGAACCATGAAGGGAGAAGGTGGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp TCCTGTGCTGCCTTCTTCTCGAGCCAGGACAGCACAACTCACGCTCCTCTTGGTCCCACAGCTCCTGCCTaGTGGGTGCTGAGCAAACTG +
Preference number: 4 (lower is better)
Translates to: SCAAFFSSQDSTTHAPLGPTAPA*WVLSKL
Trigger: CAGTTTGCTCAGCACCCAGCAGGCAGGAGCTGTGGG...ACCAAGAGGAGCGTGAGTTGTGCTGTCCTGGCTCGAGAAGAAGGCAGCACAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp TGCCAAGTTGACAAGGGGTGGACCTGTGGACTTCATTTTGGGTGTGAACTCGACCGAGCAGGCCTGTGGTaGCCGGGTGTGCCCACAGCT +
Preference number: 4 (lower is better)
Translates to: CQVDKGWTCGLHFGCELDRAGLW*PGVPTA
Trigger: AGCTGTGGGCACACCCGGGCACCACAGGCCTGCTCG...GTCGAGTTCACACCCAAAATGAAGTCCACAGGTCCACCCCTTGTCAACTTGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp CCTCAGCTACAGATCCTGTGCTGCCTTCTTCTCGAGCCAGGACAGCACAACTCATTGCCTTGGAGGCCATaGGGCCGGGGGCTGTTCGTT +
Preference number: 4 (lower is better)
Translates to: PQLQILCCLLLEPGQHNSLPWRP*GRGLFV
Trigger: AACGAACAGCCCCCGGCCGCATGGCCTCCAAGGCAA...TGAGTTGTGCTGTCCTGGCTCGAGAAGAAGGCAGCACAGGATCTGTAGCTGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp AGCTGGTGGGTTCAGGCAAGGATGCCTCCACATGAACATGCTACCCTCTGCATGCCACTGCCCATGTCTTaGCTTGGAGGCCATGCGGCC +
Preference number: 4 (lower is better)
Translates to: SWWVQARMPPHEHATLCMPLPMS*LGGHAA
Trigger: GGCCGCATGGCCTCCAAGGCAAGACATGGGCAGTGG...CATGCAGAGGGTAGCATGTTCATGTGGAGGCATCCTTGCCTGAACCCACCAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp CCTCAGCTACAGATCCTGTGCTGCCTTCTTCTCGAGCCAGGACAGCACAACTCACCACTGCCCATGTCTTaGCTTGGAGGCCATGCGGCC +
Preference number: 4 (lower is better)
Translates to: PQLQILCCLLLEPGQHNSPLPMS*LGGHAA
Trigger: GGCCGCATGGCCTCCAAGGCAAGACATGGGCAGTGG...TGAGTTGTGCTGTCCTGGCTCGAGAAGAAGGCAGCACAGGATCTGTAGCTGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp GACAGCGTGGAGGGAGTGGAGTCAAAAGCCTTTGTTACTTGCAGGCAGAGCCGACGTCCTGAGCCACCCTaGCGGCATCCCAGGTTGACT +
Preference number: 4 (lower is better)
Translates to: DSVEGVESKAFVTCRQSRRPEPP*RHPRLT
Trigger: AGTCAACCTGGGATGCCGGCAGGGTGGCTCAGGACG...TCGGCTCTGCCTGCAAGTAACAAAGGCTTTTGACTCCACTCCCTCCACGCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp CTTCGCGCTGTCTTTGGCGGTGGGCTGCCTGAGCTGGTGGGTTCAGGCAAGGATCTACAGATCCTGTGCTaGCTTCTTCTCGAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: LRAVFGGGLPELVGSGKDLQILC*LLLEPG
Trigger: TCCTGGCTCGAGAAGAAGGCAGCACAGGATCTGTAG...ATCCTTGCCTGAACCCACCAGCTCAGGCAGCCCACCGCCAAAGACAGCGCGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp TCCTGTGCTGCCTTCTTCTCGAGCCAGGACAGCACAACTCACGCTCCTCTTGGTCTCTCTTCAGCTCCATaGTGCCAGTGCCCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: SCAAFFSSQDSTTHAPLGLSSAP*CQCPSC
Trigger: GCAGCTGGGGCACTGGCAGCATGGAGCTGAAGAGAG...ACCAAGAGGAGCGTGAGTTGTGCTGTCCTGGCTCGAGAAGAAGGCAGCACAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423981.1
CDS-3UTR GCA 90 bp TCCTGTGCTGCCTTCTTCTCGAGCCAGGACAGCACAACTCACGCTCCTCTTGGTTCTTCAGCTCCATGCTaGCAGTGCCCCAGCTGCGCT +
Preference number: 4 (lower is better)
Translates to: SCAAFFSSQDSTTHAPLGSSAPC*QCPSCA
Trigger: AGCGCAGCTGGGGCACTGGCAGCATGGAGCTGAAGA...ACCAAGAGGAGCGTGAGTTGTGCTGTCCTGGCTCGAGAAGAAGGCAGCACAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423981.1
CDS-3UTR CCA 90 bp TCCTGTGCTGCCTTCTTCTCGAGCCAGGACAGCACAACTCACGCTCCTCTTGGTGTGTGTGGGGTCTACTaGTGCTGTGCTCTGCCGCAG +
Preference number: 4 (lower is better)
Translates to: SCAAFFSSQDSTTHAPLGVCGVY*CCALPQ
Trigger: CTGCGGCAGAGCACAGCACCAGTAGACCCCACACAC...ACCAAGAGGAGCGTGAGTTGTGCTGTCCTGGCTCGAGAAGAAGGCAGCACAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321420.5
CDS-3UTR CCA 90 bp ATCTGGACGGGCCTGGTCAGAAGCCTTGCTGCACACTTTGGAACCTGTGATGTGCGTATTCTTGGGCACTaGGGCTGGCTTGGGGGCCCT +
Preference number: 4 (lower is better)
Translates to: IWTGLVRSLAAHFGTCDVRILGH*GWLGGP
Trigger: AGGGCCCCCAAGCCAGCCCCAGTGCCCAAGAATACG...CACATCACAGGTTCCAAAGTGTGCAGCAAGGCTTCTGACCAGGCCCGTCCAGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp GCTGAGGCCCAGGGAGAACAAATAAAGAAGGCAAACTGGTCTCTCTCTCAGAGCCTGCGGGTCCCCCTTTaGGGTCCAGCTGCGCCCCTT +
Preference number: 4 (lower is better)
Translates to: AEAQGEQIKKANWSLSQSLRVPL*GPAAPL
Trigger: AAGGGGCGCAGCTGGACCCCAAAGGGGGACCCGCAG...GCTCTGAGAGAGAGACCAGTTTGCCTTCTTTATTTGTTCTCCCTGGGCCTCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp CCAGCCACCTTCTCCCTTCATGGTTCTGAATGTCGGGGTGCTGCACATGTGTTGTCAGAGGCTTCATTCTaGGCGGGCGAGGCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: PATFSLHGSECRGAAHVLSEASF*AGEASC
Trigger: GCAGCTGGCCTCGCCCGCCCAGAATGAAGCCTCTGA...CAACACATGTGCAGCACCCCGACATTCAGAACCATGAAGGGAGAAGGTGGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp GACAGCGTGGAGGGAGTGGAGTCAAAAGCCTTTGTTACTTGCAGGCAGAGCCGAGTGTCCAGCCGGGATTaGTCCCTGTCTGTCCCCTGG +
Preference number: 4 (lower is better)
Translates to: DSVEGVESKAFVTCRQSRVSSRD*SLSVPW
Trigger: CCAGGGGACAGACAGGGACCAATCCCGGCTGGACAC...TCGGCTCTGCCTGCAAGTAACAAAGGCTTTTGACTCCACTCCCTCCACGCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp CCTCAGCTACAGATCCTGTGCTGCCTTCTTCTCGAGCCAGGACAGCACAACTCAGGGTGCCTGTGTCGATaGAGCTGGCTTTGGAGCCGC +
Preference number: 4 (lower is better)
Translates to: PQLQILCCLLLEPGQHNSGCLCR*SWLWSR
Trigger: GCGGCTCCAAAGCCAGCTCCATCGACACAGGCACCC...TGAGTTGTGCTGTCCTGGCTCGAGAAGAAGGCAGCACAGGATCTGTAGCTGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp CTAGGTGTGGAAGATCCACCCTCAATGTTGGTGGGCAGCATTCAATCTGCTGAGTGTCCCGTGGGAAGGTaGCGGCAGGAGTGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: LGVEDPPSMLVGSIQSAECPVGR*RQECLG
Trigger: GCCCAGGCACTCCTGCCGCCACCTTCCCACGGGACA...CTCAGCAGATTGAATGCTGCCCACCAACATTGAGGGTGGATCTTCCACACCTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp GCTGAGGCCCAGGGAGAACAAATAAAGAAGGCAAACTGGTCTCTCTCTCAGAGCTGTCCCGTGGGAAGGTaGCGGCAGGAGTGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: AEAQGEQIKKANWSLSQSCPVGR*RQECLG
Trigger: GCCCAGGCACTCCTGCCGCCACCTTCCCACGGGACA...GCTCTGAGAGAGAGACCAGTTTGCCTTCTTTATTTGTTCTCCCTGGGCCTCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp AGCTGGTGGGTTCAGGCAAGGATGCCTCCACATGAACATGCTACCCTCTGCATGGGTCATCATCTGGGCTaGGGCCAAGAGGACCCTCGC +
Preference number: 4 (lower is better)
Translates to: SWWVQARMPPHEHATLCMGHHLG*GQEDPR
Trigger: GCGAGGGTCCTCTTGGCCCCAGCCCAGATGATGACC...CATGCAGAGGGTAGCATGTTCATGTGGAGGCATCCTTGCCTGAACCCACCAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp GCTGAGGCCCAGGGAGAACAAATAAAGAAGGCAAACTGGTCTCTCTCTCAGAGCGCTGCATATGGACAGTaGCGTCCCCAGGGCCGGCCC +
Preference number: 4 (lower is better)
Translates to: AEAQGEQIKKANWSLSQSAAYGQ*RPQGRP
Trigger: GGGCCGGCCCTGGGGACGCCACTGTCCATATGCAGC...GCTCTGAGAGAGAGACCAGTTTGCCTTCTTTATTTGTTCTCCCTGGGCCTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp TCCTGTGCTGCCTTCTTCTCGAGCCAGGACAGCACAACTCACGCTCCTCTTGGTCTCGGAAGCTGCATATaGACAGTGGCGTCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: SCAAFFSSQDSTTHAPLGLGSCI*TVASPG
Trigger: CCCTGGGGACGCCACTGTCCATATGCAGCTTCCGAG...ACCAAGAGGAGCGTGAGTTGTGCTGTCCTGGCTCGAGAAGAAGGCAGCACAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp ATCTGGACGGGCCTGGTCAGAAGCCTTGCTGCACACTTTGGAACCTGTGATGTGGAGCAGGTCAGGGCCTaGTGCTGGGGCCAAGTTCTC +
Preference number: 4 (lower is better)
Translates to: IWTGLVRSLAAHFGTCDVEQVRA*CWGQVL
Trigger: GAGAACTTGGCCCCAGCACCAGGCCCTGACCTGCTC...CACATCACAGGTTCCAAAGTGTGCAGCAAGGCTTCTGACCAGGCCCGTCCAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp CCTCAGCTACAGATCCTGTGCTGCCTTCTTCTCGAGCCAGGACAGCACAACTCAGGCCCAGGCTCCTTCTaGGAGCAGGGCCAGGTAGAA +
Preference number: 4 (lower is better)
Translates to: PQLQILCCLLLEPGQHNSGPGSF*EQGQVE
Trigger: TTCTACCTGGCCCTGCTCCCAGAAGGAGCCTGGGCC...TGAGTTGTGCTGTCCTGGCTCGAGAAGAAGGCAGCACAGGATCTGTAGCTGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp GGACGCCCTTCAGGCCCTCAGCATGTTGTAGCCACCTGTCCTGGGGCAGCGAGTTCTCTCTCTCAGAGCTaGGACAGGCTTTTCTTCCAC +
Preference number: 4 (lower is better)
Translates to: GRPSGPQHVVATCPGAASSLSQS*DRLFFH
Trigger: GTGGAAGAAAAGCCTGTCCCAGCTCTGAGAGAGAGA...ACTCGCTGCCCCAGGACAGGTGGCTACAACATGCTGAGGGCCTGAAGGGCGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp GACAGCGTGGAGGGAGTGGAGTCAAAAGCCTTTGTTACTTGCAGGCAGAGCCGAGCGAGTAGGCCAGACTaGGGCCAGATTGAGGCCGGT +
Preference number: 4 (lower is better)
Translates to: DSVEGVESKAFVTCRQSRASRPD*GQIEAG
Trigger: ACCGGCCTCAATCTGGCCCCAGTCTGGCCTACTCGC...TCGGCTCTGCCTGCAAGTAACAAAGGCTTTTGACTCCACTCCCTCCACGCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp CTTCGCGCTGTCTTTGGCGGTGGGCTGCCTGAGCTGGTGGGTTCAGGCAAGGATATGCATGATGCTGGCTaGCTCACTCCTGTCATCCAG +
Preference number: 4 (lower is better)
Translates to: LRAVFGGGLPELVGSGKDMHDAG*LTPVIQ
Trigger: CTGGATGACAGGAGTGAGCCAGCCAGCATCATGCAT...ATCCTTGCCTGAACCCACCAGCTCAGGCAGCCCACCGCCAAAGACAGCGCGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp CCTCAGCTACAGATCCTGTGCTGCCTTCTTCTCGAGCCAGGACAGCACAACTCACAGGGGCTCCAGATCTaGACGGGCCTGGTCAGAAGC +
Preference number: 4 (lower is better)
Translates to: PQLQILCCLLLEPGQHNSQGLQI*TGLVRS
Trigger: GCTTCTGACCAGGCCCGTCCAGATCTGGAGCCCCTG...TGAGTTGTGCTGTCCTGGCTCGAGAAGAAGGCAGCACAGGATCTGTAGCTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp CCAGCCACCTTCTCCCTTCATGGTTCTGAATGTCGGGGTGCTGCACATGTGTTGCAGGGGCTCCAGATCTaGACGGGCCTGGTCAGAAGC +
Preference number: 4 (lower is better)
Translates to: PATFSLHGSECRGAAHVLQGLQI*TGLVRS
Trigger: GCTTCTGACCAGGCCCGTCCAGATCTGGAGCCCCTG...CAACACATGTGCAGCACCCCGACATTCAGAACCATGAAGGGAGAAGGTGGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR TCA 90 bp TCCTGTGCTGCCTTCTTCTCGAGCCAGGACAGCACAACTCACGCTCCTCTTGGTACTTTCGCACCGGTTTaGAGGTGGCTCCACAGAGGG +
Preference number: 4 (lower is better)
Translates to: SCAAFFSSQDSTTHAPLGTFAPV*RWLHRG
Trigger: CCCTCTGTGGAGCCACCTTCAAACCGGTGCGAAAGT...ACCAAGAGGAGCGTGAGTTGTGCTGTCCTGGCTCGAGAAGAAGGCAGCACAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR TCA 90 bp AGCTGGTGGGTTCAGGCAAGGATGCCTCCACATGAACATGCTACCCTCTGCATGGTCGAAGCTCTGGAGTaGGGCCACGTCCTCACACAG +
Preference number: 4 (lower is better)
Translates to: SWWVQARMPPHEHATLCMVEALE*GHVLTQ
Trigger: CTGTGTGAGGACGTGGCCTCACTCCAGAGCTTCGAC...CATGCAGAGGGTAGCATGTTCATGTGGAGGCATCCTTGCCTGAACCCACCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR TCA 90 bp CTAGGTGTGGAAGATCCACCCTCAATGTTGGTGGGCAGCATTCAATCTGCTGAGTTGCTCTCCAGGCCCTaGGCAGCCTGGGTTGGGCTC +
Preference number: 4 (lower is better)
Translates to: LGVEDPPSMLVGSIQSAELLSRP*AAWVGL
Trigger: GAGCCCAACCCAGGCTGCTCAGGGCCTGGAGAGCAA...CTCAGCAGATTGAATGCTGCCCACCAACATTGAGGGTGGATCTTCCACACCTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR TCA 90 bp AGCTGGTGGGTTCAGGCAAGGATGCCTCCACATGAACATGCTACCCTCTGCATGAGGGCACGCTGCTGCTaGCGCACTGAGCGATTCACA +
Preference number: 4 (lower is better)
Translates to: SWWVQARMPPHEHATLCMRARCC*RTERFT
Trigger: TGTGAATCGCTCAGTGCGTCAGCAGCAGCGTGCCCT...CATGCAGAGGGTAGCATGTTCATGTGGAGGCATCCTTGCCTGAACCCACCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR TCA 90 bp ATCTGGACGGGCCTGGTCAGAAGCCTTGCTGCACACTTTGGAACCTGTGATGTGTCTCCAGCCCCTGCATaGGGAGCAGCTAGGTGGTTG +
Preference number: 4 (lower is better)
Translates to: IWTGLVRSLAAHFGTCDVSPAPA*GAARWL
Trigger: CAACCACCTAGCTGCTCCTCATGCAGGGGCTGGAGA...CACATCACAGGTTCCAAAGTGTGCAGCAAGGCTTCTGACCAGGCCCGTCCAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR TCA 90 bp CTTCGCGCTGTCTTTGGCGGTGGGCTGCCTGAGCTGGTGGGTTCAGGCAAGGATCAGCATTCAATCTGCTaGGGCCCAGGGAGAACAAAT +
Preference number: 4 (lower is better)
Translates to: LRAVFGGGLPELVGSGKDQHSIC*GPGRTN
Trigger: ATTTGTTCTCCCTGGGCCTCAGCAGATTGAATGCTG...ATCCTTGCCTGAACCCACCAGCTCAGGCAGCCCACCGCCAAAGACAGCGCGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp TGCCAAGTTGACAAGGGGTGGACCTGTGGACTTCATTTTGGGTGTGAACTCGACTGGCAGCCGTGGCCCTaGCTGCCCCAGACATGCTGT +
Preference number: 4 (lower is better)
Translates to: CQVDKGWTCGLHFGCELDWQPWP*LPQTCC
Trigger: ACAGCATGTCTGGGGCAGGCAGGGCCACGGCTGCCA...GTCGAGTTCACACCCAAAATGAAGTCCACAGGTCCACCCCTTGTCAACTTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp TCCTGTGCTGCCTTCTTCTCGAGCCAGGACAGCACAACTCACGCTCCTCTTGGTTCCTCTTCCTCGGGATaGTCTTGGCCACAGCTGGCA +
Preference number: 4 (lower is better)
Translates to: SCAAFFSSQDSTTHAPLGSSSSG*SWPQLA
Trigger: TGCCAGCTGTGGCCAAGAGCATCCCGAGGAAGAGGA...ACCAAGAGGAGCGTGAGTTGTGCTGTCCTGGCTCGAGAAGAAGGCAGCACAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp AAGGGATACCTAGAGACCTGGGAGATCATTATTCTGGGCATGTCTGTGAGGTGTCGCTGCGAGGGTCCCTaGAGGGGCAGAGGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: KGYLETWEIIILGMSVRCRCEGP*RGRGAA
Trigger: AGCTGCCCCTCTGCCCCTGCAGGGACCCTCGCAGCG...ACACCTCACAGACATGCCCAGAATAATGATCTCCCAGGTCTCTAGGTATCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp GACAGCGTGGAGGGAGTGGAGTCAAAAGCCTTTGTTACTTGCAGGCAGAGCCGAGCCTCTGTGCTGAGCTaGAAGGGCTGGTCCTCCACA +
Preference number: 4 (lower is better)
Translates to: DSVEGVESKAFVTCRQSRASVLS*KGWSST
Trigger: TGTGGAGGACCAGCCCTTGCAGCTCAGCACAGAGGC...TCGGCTCTGCCTGCAAGTAACAAAGGCTTTTGACTCCACTCCCTCCACGCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp CTTGGGACTATGGCATTTGGGATTGCGTCTTTTGGGATTCACACACATCCCAGGCACGGGCCAGGAGGCTaGAGCGGCATTCTGGGGCAC +
Preference number: 4 (lower is better)
Translates to: LGTMAFGIASFGIHTHPRHGPGG*SGILGH
Trigger: GTGCCCCAGAATGCCGCTGCAGCCTCCTGGCCCGTG...CCTGGGATGTGTGTGAATCCCAAAAGACGCAATCCCAAATGCCATAGTCCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp TCCTGTGCTGCCTTCTTCTCGAGCCAGGACAGCACAACTCACGCTCCTCTTGGTCCAGGAGGTAGAGGCTaGAGTGAGCCAAGACTGTGC +
Preference number: 4 (lower is better)
Translates to: SCAAFFSSQDSTTHAPLGPGGRG*SEPRLC
Trigger: GCACAGTCTTGGCTCACTGCAGCCTCTACCTCCTGG...ACCAAGAGGAGCGTGAGTTGTGCTGTCCTGGCTCGAGAAGAAGGCAGCACAGGA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp CCAGCCACCTTCTCCCTTCATGGTTCTGAATGTCGGGGTGCTGCACATGTGTTGCAGGGCGCACAGGGATaGATGATGCTGGCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: PATFSLHGSECRGAAHVLQGAQG*MMLAGS
Trigger: TGAGCCAGCCAGCATCATGCATCCCTGTGCGCCCTG...CAACACATGTGCAGCACCCCGACATTCAGAACCATGAAGGGAGAAGGTGGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp AGCTGGTGGGTTCAGGCAAGGATGCCTCCACATGAACATGCTACCCTCTGCATGATCTGTCCCTGCACCTaGTGGCCTGACACTGGCCCA +
Preference number: 4 (lower is better)
Translates to: SWWVQARMPPHEHATLCMICPCT*WPDTGP
Trigger: TGGGCCAGTGTCAGGCCAGCAGGTGCAGGGACAGAT...CATGCAGAGGGTAGCATGTTCATGTGGAGGCATCCTTGCCTGAACCCACCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp CCAGCCACCTTCTCCCTTCATGGTTCTGAATGTCGGGGTGCTGCACATGTGTTGATCTGTCCCTGCACCTaGTGGCCTGACACTGGCCCA +
Preference number: 4 (lower is better)
Translates to: PATFSLHGSECRGAAHVLICPCT*WPDTGP
Trigger: TGGGCCAGTGTCAGGCCAGCAGGTGCAGGGACAGAT...CAACACATGTGCAGCACCCCGACATTCAGAACCATGAAGGGAGAAGGTGGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp CCAGCCACCTTCTCCCTTCATGGTTCTGAATGTCGGGGTGCTGCACATGTGTTGGGCTACTCCCTCAGGTaGAGCACAAAGCCCCAGGCT +
Preference number: 4 (lower is better)
Translates to: PATFSLHGSECRGAAHVLGYSLR*STKPQA
Trigger: AGCCTGGGGCTTTGTGCTGCACCTGAGGGAGTAGCC...CAACACATGTGCAGCACCCCGACATTCAGAACCATGAAGGGAGAAGGTGGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp GCTGAGGCCCAGGGAGAACAAATAAAGAAGGCAAACTGGTCTCTCTCTCAGAGCGCACTGGGGCTGGCTTaGGGGCCCTTCTCACTGTGG +
Preference number: 4 (lower is better)
Translates to: AEAQGEQIKKANWSLSQSALGLA*GPFSLW
Trigger: CCACAGTGAGAAGGGCCCCCAAGCCAGCCCCAGTGC...GCTCTGAGAGAGAGACCAGTTTGCCTTCTTTATTTGTTCTCCCTGGGCCTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp CTAGGTGTGGAAGATCCACCCTCAATGTTGGTGGGCAGCATTCAATCTGCTGAGCTTGGGCACTGGGGCTaGCTTGGGGGCCCTTCTCAC +
Preference number: 4 (lower is better)
Translates to: LGVEDPPSMLVGSIQSAELGHWG*LGGPSH
Trigger: GTGAGAAGGGCCCCCAAGCCAGCCCCAGTGCCCAAG...CTCAGCAGATTGAATGCTGCCCACCAACATTGAGGGTGGATCTTCCACACCTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp TCCTGTGCTGCCTTCTTCTCGAGCCAGGACAGCACAACTCACGCTCCTCTTGGTTCCTCGGGATGCTCTTaGCCACAGCTGGCACAAAGG +
Preference number: 4 (lower is better)
Translates to: SCAAFFSSQDSTTHAPLGSSGCS*PQLAQR
Trigger: CCTTTGTGCCAGCTGTGGCCAAGAGCATCCCGAGGA...ACCAAGAGGAGCGTGAGTTGTGCTGTCCTGGCTCGAGAAGAAGGCAGCACAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp GCTGAGGCCCAGGGAGAACAAATAAAGAAGGCAAACTGGTCTCTCTCTCAGAGCTGCTCCACACTGCCCTaGAGAGGGCCCCTGGGAACC +
Preference number: 4 (lower is better)
Translates to: AEAQGEQIKKANWSLSQSCSTLP*RGPLGT
Trigger: GGTTCCCAGGGGCCCTCTCCAGGGCAGTGTGGAGCA...GCTCTGAGAGAGAGACCAGTTTGCCTTCTTTATTTGTTCTCCCTGGGCCTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp TGCCAAGTTGACAAGGGGTGGACCTGTGGACTTCATTTTGGGTGTGAACTCGACCGATGGAGCTGGCTTTaGAGCCGCTGCGAGGGTCCC +
Preference number: 4 (lower is better)
Translates to: CQVDKGWTCGLHFGCELDRWSWL*SRCEGP
Trigger: GGGACCCTCGCAGCGGCTCCAAAGCCAGCTCCATCG...GTCGAGTTCACACCCAAAATGAAGTCCACAGGTCCACCCCTTGTCAACTTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp CCAGCCACCTTCTCCCTTCATGGTTCTGAATGTCGGGGTGCTGCACATGTGTTGCTGTGTCGATGGAGCTaGCTTTGGAGCCGCTGCGAG +
Preference number: 4 (lower is better)
Translates to: PATFSLHGSECRGAAHVLLCRWS*LWSRCE
Trigger: CTCGCAGCGGCTCCAAAGCCAGCTCCATCGACACAG...CAACACATGTGCAGCACCCCGACATTCAGAACCATGAAGGGAGAAGGTGGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp AGCTGGTGGGTTCAGGCAAGGATGCCTCCACATGAACATGCTACCCTCTGCATGGGCGGCAGGAGTGCCTaGGCTCTCAGCTTCCTTCTT +
Preference number: 4 (lower is better)
Translates to: SWWVQARMPPHEHATLCMGGRSA*ALSFLL
Trigger: AAGAAGGAAGCTGAGAGCCCAGGCACTCCTGCCGCC...CATGCAGAGGGTAGCATGTTCATGTGGAGGCATCCTTGCCTGAACCCACCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp AGCTGGTGGGTTCAGGCAAGGATGCCTCCACATGAACATGCTACCCTCTGCATGCAAGAGGACCCTCGCTaGGGTCGTGGAAGAGCTCGT +
Preference number: 4 (lower is better)
Translates to: SWWVQARMPPHEHATLCMQEDPR*GRGRAR
Trigger: ACGAGCTCTTCCACGACCCCAGCGAGGGTCCTCTTG...CATGCAGAGGGTAGCATGTTCATGTGGAGGCATCCTTGCCTGAACCCACCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp CTAGGTGTGGAAGATCCACCCTCAATGTTGGTGGGCAGCATTCAATCTGCTGAGGTCAGGGCCTGGTGCTaGGGCCAAGTTCTCCTCGGC +
Preference number: 4 (lower is better)
Translates to: LGVEDPPSMLVGSIQSAEVRAWC*GQVLLG
Trigger: GCCGAGGAGAACTTGGCCCCAGCACCAGGCCCTGAC...CTCAGCAGATTGAATGCTGCCCACCAACATTGAGGGTGGATCTTCCACACCTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp GACAGCGTGGAGGGAGTGGAGTCAAAAGCCTTTGTTACTTGCAGGCAGAGCCGACTCTGTAGGAAGCCCTaGCTGAGCAGGTCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: DSVEGVESKAFVTCRQSRLCRKP*LSRSGP
Trigger: AGGCCCTGACCTGCTCAGCCAGGGCTTCCTACAGAG...TCGGCTCTGCCTGCAAGTAACAAAGGCTTTTGACTCCACTCCCTCCACGCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp GCTGAGGCCCAGGGAGAACAAATAAAGAAGGCAAACTGGTCTCTCTCTCAGAGCGCCCTAGGGGCTCCCTaGGAACCAGGTGGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: AEAQGEQIKKANWSLSQSALGAP*EPGGAA
Trigger: TGCAGCTCCACCTGGTTCCCAGGGAGCCCCTAGGGC...GCTCTGAGAGAGAGACCAGTTTGCCTTCTTTATTTGTTCTCCCTGGGCCTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp GGACGCCCTTCAGGCCCTCAGCATGTTGTAGCCACCTGTCCTGGGGCAGCGAGTCCAGGTAGAAGGAACTaGGGCCTTATTTTTACCGGA +
Preference number: 4 (lower is better)
Translates to: GRPSGPQHVVATCPGAASPGRRN*GLIFTG
Trigger: TCCGGTAAAAATAAGGCCCCAGTTCCTTCTACCTGG...ACTCGCTGCCCCAGGACAGGTGGCTACAACATGCTGAGGGCCTGAAGGGCGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp GCTGAGGCCCAGGGAGAACAAATAAAGAAGGCAAACTGGTCTCTCTCTCAGAGCGTCACCTCCGTGACCTaGCCTCCAGGGGCCTCGGAA +
Preference number: 4 (lower is better)
Translates to: AEAQGEQIKKANWSLSQSVTSVT*PPGASE
Trigger: TTCCGAGGCCCCTGGAGGCCAGGTCACGGAGGTGAC...GCTCTGAGAGAGAGACCAGTTTGCCTTCTTTATTTGTTCTCCCTGGGCCTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp AGCTGGTGGGTTCAGGCAAGGATGCCTCCACATGAACATGCTACCCTCTGCATGGTAGGCCATGGATGGTaGTCATGCTGGGGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: SWWVQARMPPHEHATLCMVGHGW*SCWGSC
Trigger: GCAGCTCCCCCAGCATGACCACCATCCATGGCCTAC...CATGCAGAGGGTAGCATGTTCATGTGGAGGCATCCTTGCCTGAACCCACCAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp CCAGCCACCTTCTCCCTTCATGGTTCTGAATGTCGGGGTGCTGCACATGTGTTGAGGGTAGGCCATGGATaGTGGTCATGCTGGGGGAGC +
Preference number: 4 (lower is better)
Translates to: PATFSLHGSECRGAAHVLRVGHG*WSCWGS
Trigger: GCTCCCCCAGCATGACCACCATCCATGGCCTACCCT...CAACACATGTGCAGCACCCCGACATTCAGAACCATGAAGGGAGAAGGTGGCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp ATCTGGACGGGCCTGGTCAGAAGCCTTGCTGCACACTTTGGAACCTGTGATGTGAGGGTAGGCCATGGATaGTGGTCATGCTGGGGGAGC +
Preference number: 4 (lower is better)
Translates to: IWTGLVRSLAAHFGTCDVRVGHG*WSCWGS
Trigger: GCTCCCCCAGCATGACCACCATCCATGGCCTACCCT...CACATCACAGGTTCCAAAGTGTGCAGCAAGGCTTCTGACCAGGCCCGTCCAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp CTTGGGACTATGGCATTTGGGATTGCGTCTTTTGGGATTCACACACATCCCAGGACAGAGGCCCAGGCCTaGACACCTAGCCCGGTGGGC +
Preference number: 4 (lower is better)
Translates to: LGTMAFGIASFGIHTHPRTEAQA*TPSPVG
Trigger: GCCCACCGGGCTAGGTGTCCAGGCCTGGGCCTCTGT...CCTGGGATGTGTGTGAATCCCAAAAGACGCAATCCCAAATGCCATAGTCCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp GCTGAGGCCCAGGGAGAACAAATAAAGAAGGCAAACTGGTCTCTCTCTCAGAGCGGCTCAGAGTCCAGCTaGCTGCCGTGTGCCACCTGC +
Preference number: 4 (lower is better)
Translates to: AEAQGEQIKKANWSLSQSGSESS*LPCATC
Trigger: GCAGGTGGCACACGGCAGCCAGCTGGACTCTGAGCC...GCTCTGAGAGAGAGACCAGTTTGCCTTCTTTATTTGTTCTCCCTGGGCCTCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp TGCCAAGTTGACAAGGGGTGGACCTGTGGACTTCATTTTGGGTGTGAACTCGACGGCTCAGAGTCCAGCTaGCTGCCGTGTGCCACCTGC +
Preference number: 4 (lower is better)
Translates to: CQVDKGWTCGLHFGCELDGSESS*LPCATC
Trigger: GCAGGTGGCACACGGCAGCCAGCTGGACTCTGAGCC...GTCGAGTTCACACCCAAAATGAAGTCCACAGGTCCACCCCTTGTCAACTTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp GCTGAGGCCCAGGGAGAACAAATAAAGAAGGCAAACTGGTCTCTCTCTCAGAGCAGAGGCCCCCACTTCTaGCTGGCCACAGAGGAGGCC +
Preference number: 4 (lower is better)
Translates to: AEAQGEQIKKANWSLSQSRGPHF*LATEEA
Trigger: GGCCTCCTCTGTGGCCAGCCAGAAGTGGGGGCCTCT...GCTCTGAGAGAGAGACCAGTTTGCCTTCTTTATTTGTTCTCCCTGGGCCTCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp CTTCGCGCTGTCTTTGGCGGTGGGCTGCCTGAGCTGGTGGGTTCAGGCAAGGATCACCCTCAATGTTGGTaGGCAGCATTCAATCTGCTG +
Preference number: 4 (lower is better)
Translates to: LRAVFGGGLPELVGSGKDHPQCW*AAFNLL
Trigger: CAGCAGATTGAATGCTGCCCACCAACATTGAGGGTG...ATCCTTGCCTGAACCCACCAGCTCAGGCAGCCCACCGCCAAAGACAGCGCGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp AGCTGGTGGGTTCAGGCAAGGATGCCTCCACATGAACATGCTACCCTCTGCATGTTGAGGCCGGTTCAGTaGGCCCTCCTAAGGTCGGCT +
Preference number: 4 (lower is better)
Translates to: SWWVQARMPPHEHATLCMLRPVQ*ALLRSA
Trigger: AGCCGACCTTAGGAGGGCCCACTGAACCGGCCTCAA...CATGCAGAGGGTAGCATGTTCATGTGGAGGCATCCTTGCCTGAACCCACCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp TGCCAAGTTGACAAGGGGTGGACCTGTGGACTTCATTTTGGGTGTGAACTCGACACCAGCGTCCCCTGGTaGGAGGGCCACCCTCAGCTA +
Preference number: 4 (lower is better)
Translates to: CQVDKGWTCGLHFGCELDTSVPW*EGHPQL
Trigger: TAGCTGAGGGTGGCCCTCCCACCAGGGGACGCTGGT...GTCGAGTTCACACCCAAAATGAAGTCCACAGGTCCACCCCTTGTCAACTTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp AGCTGGTGGGTTCAGGCAAGGATGCCTCCACATGAACATGCTACCCTCTGCATGAGGAGGGCTCAGATGTaGCTCCACAGGGGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: SWWVQARMPPHEHATLCMRRAQM*LHRGSR
Trigger: TCTGGAGCCCCTGTGGAGCCACATCTGAGCCCTCCT...CATGCAGAGGGTAGCATGTTCATGTGGAGGCATCCTTGCCTGAACCCACCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR CAA 72 bp ACTGCCTTGACATCAGAGCTTCAGGCTCGCTGGCCTTaGGACTCTGGAACTTACACCCATGGCCCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: TALTSELQARWP*DSGTYTHGPPG
Trigger: CCCAGGAGGGCCATGGGTGTAAGTTCCAGAGTCCAAAGGCCAGCGAGCCTGAAGCTCTGATGTCAAGGCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR CAA 72 bp CTGAGGGGCCTAGGTGTGGAAGATCCACCCTCAATGTaGGTGGGCAGCATTCAATCTGCTGAGGCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: LRGLGVEDPPSM*VGSIQSAEAQG
Trigger: TCCCTGGGCCTCAGCAGATTGAATGCTGCCCACCAACATTGAGGGTGGATCTTCCACACCTAGGCCCCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR TCA 90 bp ATCTGGACGGGCCTGGTCAGAAGCCTTGCTGCACACTTTGGAACCTGTGATGTGGCTCTGCCGCAGTCTTaGGGGAGGAGCAGAAATGCT +
Preference number: 4 (lower is better)
Translates to: IWTGLVRSLAAHFGTCDVALPQS*GRSRNA
Trigger: AGCATTTCTGCTCCTCCCTCAAGACTGCGGCAGAGC...CACATCACAGGTTCCAAAGTGTGCAGCAAGGCTTCTGACCAGGCCCGTCCAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321420.5
CDS-3UTR TCA 90 bp AGCTGGTGGGTTCAGGCAAGGATGCCTCCACATGAACATGCTACCCTCTGCATGACTTTCGCACCGGTTTaGAGGTGGCTCCACAGAGGG +
Preference number: 4 (lower is better)
Translates to: SWWVQARMPPHEHATLCMTFAPV*RWLHRG
Trigger: CCCTCTGTGGAGCCACCTTCAAACCGGTGCGAAAGT...CATGCAGAGGGTAGCATGTTCATGTGGAGGCATCCTTGCCTGAACCCACCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR TCA 90 bp TCCTGTGCTGCCTTCTTCTCGAGCCAGGACAGCACAACTCACGCTCCTCTTGGTCCAGACATGCTGTCGTaGGTCTTGCACTTTCGCACC +
Preference number: 4 (lower is better)
Translates to: SCAAFFSSQDSTTHAPLGPDMLS*VLHFRT
Trigger: GGTGCGAAAGTGCAAGACTCACGACAGCATGTCTGG...ACCAAGAGGAGCGTGAGTTGTGCTGTCCTGGCTCGAGAAGAAGGCAGCACAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR TCA 90 bp CTTGGGACTATGGCATTTGGGATTGCGTCTTTTGGGATTCACACACATCCCAGGAGACTGGGGCCAGATTaGGGCCGGTTCAGTGGGCCC +
Preference number: 4 (lower is better)
Translates to: LGTMAFGIASFGIHTHPRRLGPD*GRFSGP
Trigger: GGGCCCACTGAACCGGCCTCAATCTGGCCCCAGTCT...CCTGGGATGTGTGTGAATCCCAAAAGACGCAATCCCAAATGCCATAGTCCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR TCA 90 bp GGACGCCCTTCAGGCCCTCAGCATGTTGTAGCCACCTGTCCTGGGGCAGCGAGTTTGAGACATTTTAGCTaGGGCAACATGGCGAAAACC +
Preference number: 4 (lower is better)
Translates to: GRPSGPQHVVATCPGAASLRHFS*GNMAKT
Trigger: GGTTTTCGCCATGTTGCCTCAGCTAAAATGTCTCAA...ACTCGCTGCCCCAGGACAGGTGGCTACAACATGCTGAGGGCCTGAAGGGCGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR TCA 90 bp CCAGCCACCTTCTCCCTTCATGGTTCTGAATGTCGGGGTGCTGCACATGTGTTGGGTAAGCGAATCTGGTaGAACTTGCCCCCAGCTCGG +
Preference number: 4 (lower is better)
Translates to: PATFSLHGSECRGAAHVLGKRIW*NLPPAR
Trigger: CCGAGCTGGGGGCAAGTTTCACCAGATTCGCTTACC...CAACACATGTGCAGCACCCCGACATTCAGAACCATGAAGGGAGAAGGTGGCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR TCA 90 bp TCCTGTGCTGCCTTCTTCTCGAGCCAGGACAGCACAACTCACGCTCCTCTTGGTAGAGGTTCTGGAGCTTaGGGAAGAGCAGGGCCTTTG +
Preference number: 4 (lower is better)
Translates to: SCAAFFSSQDSTTHAPLGRGSGA*GRAGPL
Trigger: CAAAGGCCCTGCTCTTCCTCAAGCTCCAGAACCTCT...ACCAAGAGGAGCGTGAGTTGTGCTGTCCTGGCTCGAGAAGAAGGCAGCACAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp ATCTGGACGGGCCTGGTCAGAAGCCTTGCTGCACACTTTGGAACCTGTGATGTGTGTGGGGTCTACTGGTaGTGTGCTCTGCCGCAGTCT +
Preference number: 4 (lower is better)
Translates to: IWTGLVRSLAAHFGTCDVCGVYW*CALPQS
Trigger: AGACTGCGGCAGAGCACAGCACCAGTAGACCCCACA...CACATCACAGGTTCCAAAGTGTGCAGCAAGGCTTCTGACCAGGCCCGTCCAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321420.5
CDS-3UTR GCA 90 bp TTGACACTTCATTCTTTCAACAAGGATTTACAGAGCGGCTACTCCCTCAGGTGCGCACTGCCCACCAGCTaGCCTGTGGCAGCCGTGGCC +
Preference number: 4 (lower is better)
Translates to: LTLHSFNKDLQSGYSLRCALPTS*PVAAVA
Trigger: GGCCACGGCTGCCACAGGGCAGCTGGTGGGCAGTGC...GCACCTGAGGGAGTAGCCGCTCTGTAAATCCTTGTTGAAAGAATGAAGTGTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp AGCTGGTGGGTTCAGGCAAGGATGCCTCCACATGAACATGCTACCCTCTGCATGGCAGAGACCAAAGGATaGATCGGCCAGGAGCTCGCT +
Preference number: 4 (lower is better)
Translates to: SWWVQARMPPHEHATLCMAETKG*IGQELA
Trigger: AGCGAGCTCCTGGCCGATGCATCCTTTGGTCTCTGC...CATGCAGAGGGTAGCATGTTCATGTGGAGGCATCCTTGCCTGAACCCACCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp CCAGCCACCTTCTCCCTTCATGGTTCTGAATGTCGGGGTGCTGCACATGTGTTGGCAGAGACCAAAGGATaGATCGGCCAGGAGCTCGCT +
Preference number: 4 (lower is better)
Translates to: PATFSLHGSECRGAAHVLAETKG*IGQELA
Trigger: AGCGAGCTCCTGGCCGATGCATCCTTTGGTCTCTGC...CAACACATGTGCAGCACCCCGACATTCAGAACCATGAAGGGAGAAGGTGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp AGCTGGTGGGTTCAGGCAAGGATGCCTCCACATGAACATGCTACCCTCTGCATGCACCGAGCTCTCATCTaGGAACACCTCCCCACAACC +
Preference number: 4 (lower is better)
Translates to: SWWVQARMPPHEHATLCMHRALI*EHLPTT
Trigger: GGTTGTGGGGAGGTGTTCGCAGATGAGAGCTCGGTG...CATGCAGAGGGTAGCATGTTCATGTGGAGGCATCCTTGCCTGAACCCACCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp TGCCAAGTTGACAAGGGGTGGACCTGTGGACTTCATTTTGGGTGTGAACTCGACGACACGGATTCGGGCTaGTCGCTCTTGGGGGTGCCT +
Preference number: 4 (lower is better)
Translates to: CQVDKGWTCGLHFGCELDDTDSG*SLLGVP
Trigger: AGGCACCCCCAAGAGCGAGCAGCCCGAATCCGTGTC...GTCGAGTTCACACCCAAAATGAAGTCCACAGGTCCACCCCTTGTCAACTTGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp GCTGAGGCCCAGGGAGAACAAATAAAGAAGGCAAACTGGTCTCTCTCTCAGAGCAGGTGGCGGCAGGAGTaGCTGGGCTCTCAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: AEAQGEQIKKANWSLSQSRWRQE*LGSQLP
Trigger: AGGAAGCTGAGAGCCCAGGCACTCCTGCCGCCACCT...GCTCTGAGAGAGAGACCAGTTTGCCTTCTTTATTTGTTCTCCCTGGGCCTCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp TGCCAAGTTGACAAGGGGTGGACCTGTGGACTTCATTTTGGGTGTGAACTCGACCAGCTTCTCTGTGGGTaGCCTAGGGGCTCCCTGGGA +
Preference number: 4 (lower is better)
Translates to: CQVDKGWTCGLHFGCELDQLLCG*PRGSLG
Trigger: TCCCAGGGAGCCCCTAGGGCACCCACAGAGAAGCTG...GTCGAGTTCACACCCAAAATGAAGTCCACAGGTCCACCCCTTGTCAACTTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp CTTCGCGCTGTCTTTGGCGGTGGGCTGCCTGAGCTGGTGGGTTCAGGCAAGGATTGTTGTCGAAGTGGCTaGAGACTCCATAGAGGAGAA +
Preference number: 4 (lower is better)
Translates to: LRAVFGGGLPELVGSGKDCCRSG*RLHRGE
Trigger: TTCTCCTCTATGGAGTCTGCAGCCACTTCGACAACA...ATCCTTGCCTGAACCCACCAGCTCAGGCAGCCCACCGCCAAAGACAGCGCGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp CCAGCCACCTTCTCCCTTCATGGTTCTGAATGTCGGGGTGCTGCACATGTGTTGTGCCAGCATGGGCTCTaGATCCAGAGTGTCACCTCC +
Preference number: 4 (lower is better)
Translates to: PATFSLHGSECRGAAHVLCQHGL*IQSVTS
Trigger: GGAGGTGACACTCTGGATGCAGAGCCCATGCTGGCA...CAACACATGTGCAGCACCCCGACATTCAGAACCATGAAGGGAGAAGGTGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp CCAGCCACCTTCTCCCTTCATGGTTCTGAATGTCGGGGTGCTGCACATGTGTTGGCCCAAAGAGCCCACTaGCCATGTCTTGCCTTGGAG +
Preference number: 4 (lower is better)
Translates to: PATFSLHGSECRGAAHVLAQRAH*PCLALE
Trigger: CTCCAAGGCAAGACATGGGCAGTGGGCTCTTTGGGC...CAACACATGTGCAGCACCCCGACATTCAGAACCATGAAGGGAGAAGGTGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp AGCTGGTGGGTTCAGGCAAGGATGCCTCCACATGAACATGCTACCCTCTGCATGCATGGATGGTGGTCATaGTGGGGGAGCTGCTGGACT +
Preference number: 4 (lower is better)
Translates to: SWWVQARMPPHEHATLCMHGWWS*WGSCWT
Trigger: AGTCCAGCAGCTCCCCCAGCATGACCACCATCCATG...CATGCAGAGGGTAGCATGTTCATGTGGAGGCATCCTTGCCTGAACCCACCAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp GCTGAGGCCCAGGGAGAACAAATAAAGAAGGCAAACTGGTCTCTCTCTCAGAGCCAGAGTCCAGCTGGCTaGCGTGTGCCACCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: AEAQGEQIKKANWSLSQSQSPAG*RVPPAP
Trigger: TGGAGCAGGTGGCACACGGCAGCCAGCTGGACTCTG...GCTCTGAGAGAGAGACCAGTTTGCCTTCTTTATTTGTTCTCCCTGGGCCTCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp AGCTGGTGGGTTCAGGCAAGGATGCCTCCACATGAACATGCTACCCTCTGCATGCCAAGACTGTGCCACTaGACTCCCATTCCCACCTGG +
Preference number: 4 (lower is better)
Translates to: SWWVQARMPPHEHATLCMPRLCH*TPIPTW
Trigger: CCAGGTGGGAATGGGAGTGCAGTGGCACAGTCTTGG...CATGCAGAGGGTAGCATGTTCATGTGGAGGCATCCTTGCCTGAACCCACCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp GCTGAGGCCCAGGGAGAACAAATAAAGAAGGCAAACTGGTCTCTCTCTCAGAGCTGCAGCCACGGCTGCTaGGTCTGGGGGTTTCTCGTG +
Preference number: 4 (lower is better)
Translates to: AEAQGEQIKKANWSLSQSCSHGC*VWGFLV
Trigger: CACGAGAAACCCCCAGACCCAGCAGCCGTGGCTGCA...GCTCTGAGAGAGAGACCAGTTTGCCTTCTTTATTTGTTCTCCCTGGGCCTCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp TGCCAAGTTGACAAGGGGTGGACCTGTGGACTTCATTTTGGGTGTGAACTCGACGGGCCCTTCTCACTGTaGGGCCTCTGTTGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: CQVDKGWTCGLHFGCELDGPFSL*GLCCPP
Trigger: AGGAGGGCAACAGAGGCCCCACAGTGAGAAGGGCCC...GTCGAGTTCACACCCAAAATGAAGTCCACAGGTCCACCCCTTGTCAACTTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp TCCTGTGCTGCCTTCTTCTCGAGCCAGGACAGCACAACTCACGCTCCTCTTGGTCATCTGTCGTATTCTTaGGCACTGGGGCTGGCTTGG +
Preference number: 4 (lower is better)
Translates to: SCAAFFSSQDSTTHAPLGHLSYS*ALGLAW
Trigger: CCAAGCCAGCCCCAGTGCCCAAGAATACGACAGATG...ACCAAGAGGAGCGTGAGTTGTGCTGTCCTGGCTCGAGAAGAAGGCAGCACAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp GACAGCGTGGAGGGAGTGGAGTCAAAAGCCTTTGTTACTTGCAGGCAGAGCCGATCCTCGGGATGCTCTTaGCCACAGCTGGCACAAAGG +
Preference number: 4 (lower is better)
Translates to: DSVEGVESKAFVTCRQSRSSGCS*PQLAQR
Trigger: CCTTTGTGCCAGCTGTGGCCAAGAGCATCCCGAGGA...TCGGCTCTGCCTGCAAGTAACAAAGGCTTTTGACTCCACTCCCTCCACGCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp GACAGCGTGGAGGGAGTGGAGTCAAAAGCCTTTGTTACTTGCAGGCAGAGCCGAAGCGAGTCGAAGCTCTaGAGTGAGGCCACGTCCTCA +
Preference number: 4 (lower is better)
Translates to: DSVEGVESKAFVTCRQSRSESKL*SEATSS
Trigger: TGAGGACGTGGCCTCACTCCAGAGCTTCGACTCGCT...TCGGCTCTGCCTGCAAGTAACAAAGGCTTTTGACTCCACTCCCTCCACGCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp CTTGGGACTATGGCATTTGGGATTGCGTCTTTTGGGATTCACACACATCCCAGGCCTGGAGAGGGCCCCTaGGAACCTTGCTCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: LGTMAFGIASFGIHTHPRPGEGP*EPCSPG
Trigger: GCCTGGAGAGCAAGGTTCCCAGGGGCCCTCTCCAGG...CCTGGGATGTGTGTGAATCCCAAAAGACGCAATCCCAAATGCCATAGTCCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp CTAGGTGTGGAAGATCCACCCTCAATGTTGGTGGGCAGCATTCAATCTGCTGAGGGGTGCCTGTGTCGATaGAGCTGGCTTTGGAGCCGC +
Preference number: 4 (lower is better)
Translates to: LGVEDPPSMLVGSIQSAEGCLCR*SWLWSR
Trigger: GCGGCTCCAAAGCCAGCTCCATCGACACAGGCACCC...CTCAGCAGATTGAATGCTGCCCACCAACATTGAGGGTGGATCTTCCACACCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp CTTCGCGCTGTCTTTGGCGGTGGGCTGCCTGAGCTGGTGGGTTCAGGCAAGGATGTCCTCCTCAAGTCCTaGCGAGAAGGAATCATAGTA +
Preference number: 4 (lower is better)
Translates to: LRAVFGGGLPELVGSGKDVLLKS*REGIIV
Trigger: TACTATGATTCCTTCTCGCCAGGACTTGAGGAGGAC...ATCCTTGCCTGAACCCACCAGCTCAGGCAGCCCACCGCCAAAGACAGCGCGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp CTTGGGACTATGGCATTTGGGATTGCGTCTTTTGGGATTCACACACATCCCAGGGCCCTAGGGGCTCCCTaGGAACCAGGTGGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: LGTMAFGIASFGIHTHPRALGAP*EPGGAA
Trigger: TGCAGCTCCACCTGGTTCCCAGGGAGCCCCTAGGGC...CCTGGGATGTGTGTGAATCCCAAAAGACGCAATCCCAAATGCCATAGTCCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp GACAGCGTGGAGGGAGTGGAGTCAAAAGCCTTTGTTACTTGCAGGCAGAGCCGAACAGCTCCTGCCTGCTaGGTGCTGAGCAAACTGTCG +
Preference number: 4 (lower is better)
Translates to: DSVEGVESKAFVTCRQSRTAPAC*VLSKLS
Trigger: CGACAGTTTGCTCAGCACCCAGCAGGCAGGAGCTGT...TCGGCTCTGCCTGCAAGTAACAAAGGCTTTTGACTCCACTCCCTCCACGCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp TTGACACTTCATTCTTTCAACAAGGATTTACAGAGCGGCTACTCCCTCAGGTGCCGGCGAGCAGGCCTGTaGTGCCCGGGTGTGCCCACA +
Preference number: 4 (lower is better)
Translates to: LTLHSFNKDLQSGYSLRCRRAGL*CPGVPT
Trigger: TGTGGGCACACCCGGGCACCACAGGCCTGCTCGCCG...GCACCTGAGGGAGTAGCCGCTCTGTAAATCCTTGTTGAAAGAATGAAGTGTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp CTTCGCGCTGTCTTTGGCGGTGGGCTGCCTGAGCTGGTGGGTTCAGGCAAGGATCCAGGTAGAAGGAACTaGGGCCTTATTTTTACCGGA +
Preference number: 4 (lower is better)
Translates to: LRAVFGGGLPELVGSGKDPGRRN*GLIFTG
Trigger: TCCGGTAAAAATAAGGCCCCAGTTCCTTCTACCTGG...ATCCTTGCCTGAACCCACCAGCTCAGGCAGCCCACCGCCAAAGACAGCGCGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp CCAGCCACCTTCTCCCTTCATGGTTCTGAATGTCGGGGTGCTGCACATGTGTTGTGCTGGGGGAGCTGCTaGACTGTTTCTGCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: PATFSLHGSECRGAAHVLCWGSC*TVSAPA
Trigger: TGCTGGAGCAGAAACAGTCCAGCAGCTCCCCCAGCA...CAACACATGTGCAGCACCCCGACATTCAGAACCATGAAGGGAGAAGGTGGCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp ATCTGGACGGGCCTGGTCAGAAGCCTTGCTGCACACTTTGGAACCTGTGATGTGGGATGGTGGTCATGCTaGGGGAGCTGCTGGACTGTT +
Preference number: 4 (lower is better)
Translates to: IWTGLVRSLAAHFGTCDVGWWSC*GSCWTV
Trigger: AACAGTCCAGCAGCTCCCCCAGCATGACCACCATCC...CACATCACAGGTTCCAAAGTGTGCAGCAAGGCTTCTGACCAGGCCCGTCCAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp TGCCAAGTTGACAAGGGGTGGACCTGTGGACTTCATTTTGGGTGTGAACTCGACTCTGGATGGTGGCCCTaGGAACTCCACCGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: CQVDKGWTCGLHFGCELDSGWWP*ELHRAA
Trigger: TGCTGCCCGGTGGAGTTCCCAGGGCCACCATCCAGA...GTCGAGTTCACACCCAAAATGAAGTCCACAGGTCCACCCCTTGTCAACTTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp AAGGGATACCTAGAGACCTGGGAGATCATTATTCTGGGCATGTCTGTGAGGTGTGGGCTCAGCCATGGCTaGCCCAGAGGCCCCCACTTC +
Preference number: 4 (lower is better)
Translates to: KGYLETWEIIILGMSVRCGLSHG*PRGPHF
Trigger: GAAGTGGGGGCCTCTGGGCCAGCCATGGCTGAGCCC...ACACCTCACAGACATGCCCAGAATAATGATCTCCCAGGTCTCTAGGTATCCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp CTTGGGACTATGGCATTTGGGATTGCGTCTTTTGGGATTCACACACATCCCAGGGCCCATCAACAAGGGTaGGAGGGTCCCGCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: LGTMAFGIASFGIHTHPRAHQQG*EGPASP
Trigger: AGGGCTGGCGGGACCCTCCCACCCTTGTTGATGGGC...CCTGGGATGTGTGTGAATCCCAAAAGACGCAATCCCAAATGCCATAGTCCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp TGCCAAGTTGACAAGGGGTGGACCTGTGGACTTCATTTTGGGTGTGAACTCGACTGTCCCTGCACCTGCTaGCCTGACACTGGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: CQVDKGWTCGLHFGCELDCPCTC*PDTGPG
Trigger: TCCTGGGCCAGTGTCAGGCCAGCAGGTGCAGGGACA...GTCGAGTTCACACCCAAAATGAAGTCCACAGGTCCACCCCTTGTCAACTTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp TCCTGTGCTGCCTTCTTCTCGAGCCAGGACAGCACAACTCACGCTCCTCTTGGTCTTGGAGAATGTGGATaGCCCATCTGTCCCTGCACC +
Preference number: 4 (lower is better)
Translates to: SCAAFFSSQDSTTHAPLGLGECG*PICPCT
Trigger: GGTGCAGGGACAGATGGGCCATCCACATTCTCCAAG...ACCAAGAGGAGCGTGAGTTGTGCTGTCCTGGCTCGAGAAGAAGGCAGCACAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp CTTCGCGCTGTCTTTGGCGGTGGGCTGCCTGAGCTGGTGGGTTCAGGCAAGGATGAGCTCTGCATGAGATaGGATTTCCCTAGCACTTTG +
Preference number: 4 (lower is better)
Translates to: LRAVFGGGLPELVGSGKDELCMR*DFPSTL
Trigger: CAAAGTGCTAGGGAAATCCCATCTCATGCAGAGCTC...ATCCTTGCCTGAACCCACCAGCTCAGGCAGCCCACCGCCAAAGACAGCGCGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp TCCTGTGCTGCCTTCTTCTCGAGCCAGGACAGCACAACTCACGCTCCTCTTGGTTCACGCTCCTCTTGGTaGGAGCTCTGCATGAGATGG +
Preference number: 4 (lower is better)
Translates to: SCAAFFSSQDSTTHAPLGSRSSW*ELCMRW
Trigger: CCATCTCATGCAGAGCTCCCACCAAGAGGAGCGTGA...ACCAAGAGGAGCGTGAGTTGTGCTGTCCTGGCTCGAGAAGAAGGCAGCACAGGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp AGCTGGTGGGTTCAGGCAAGGATGCCTCCACATGAACATGCTACCCTCTGCATGAGATCTGGACGGGCCTaGTCAGAAGCCTTGCTGCAC +
Preference number: 4 (lower is better)
Translates to: SWWVQARMPPHEHATLCMRSGRA*SEALLH
Trigger: GTGCAGCAAGGCTTCTGACCAGGCCCGTCCAGATCT...CATGCAGAGGGTAGCATGTTCATGTGGAGGCATCCTTGCCTGAACCCACCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR TCA 90 bp CTAGGTGTGGAAGATCCACCCTCAATGTTGGTGGGCAGCATTCAATCTGCTGAGGTCGAAGCTCTGGAGTaGGGCCACGTCCTCACACAG +
Preference number: 4 (lower is better)
Translates to: LGVEDPPSMLVGSIQSAEVEALE*GHVLTQ
Trigger: CTGTGTGAGGACGTGGCCTCACTCCAGAGCTTCGAC...CTCAGCAGATTGAATGCTGCCCACCAACATTGAGGGTGGATCTTCCACACCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR TCA 90 bp CTTGGGACTATGGCATTTGGGATTGCGTCTTTTGGGATTCACACACATCCCAGGCCACAGCCTCTGTGCTaGGCTGCAAGGGCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: LGTMAFGIASFGIHTHPRPQPLC*AARAGP
Trigger: AGGACCAGCCCTTGCAGCTCAGCACAGAGGCTGTGG...CCTGGGATGTGTGTGAATCCCAAAAGACGCAATCCCAAATGCCATAGTCCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR TCA 90 bp CCTCAGCTACAGATCCTGTGCTGCCTTCTTCTCGAGCCAGGACAGCACAACTCACTCCCTTCATGGTTCTaGATGTCGGGGTGCTGCACA +
Preference number: 4 (lower is better)
Translates to: PQLQILCCLLLEPGQHNSLPSWF*MSGCCT
Trigger: TGTGCAGCACCCCGACATTCAGAACCATGAAGGGAG...TGAGTTGTGCTGTCCTGGCTCGAGAAGAAGGCAGCACAGGATCTGTAGCTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR TCA 90 bp ATCTGGACGGGCCTGGTCAGAAGCCTTGCTGCACACTTTGGAACCTGTGATGTGACTTTGCCTGCGACCTaGCTGACCCCTTTTCCTGTG +
Preference number: 4 (lower is better)
Translates to: IWTGLVRSLAAHFGTCDVTLPAT*LTPFPV
Trigger: CACAGGAAAAGGGGTCAGTCAGGTCGCAGGCAAAGT...CACATCACAGGTTCCAAAGTGTGCAGCAAGGCTTCTGACCAGGCCCGTCCAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR TCA 90 bp CTAGGTGTGGAAGATCCACCCTCAATGTTGGTGGGCAGCATTCAATCTGCTGAGCTGTGGTCCTGTGTGTaGGTCTTGGGAGGAGGGCTC +
Preference number: 4 (lower is better)
Translates to: LGVEDPPSMLVGSIQSAELWSCV*VLGGGL
Trigger: GAGCCCTCCTCCCAAGACTCACACACAGGACCACAG...CTCAGCAGATTGAATGCTGCCCACCAACATTGAGGGTGGATCTTCCACACCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR TCA 90 bp CTTGGGACTATGGCATTTGGGATTGCGTCTTTTGGGATTCACACACATCCCAGGCCCAGCTCGGCTCAGTaGTGCTGCTGTGGTCCTGTG +
Preference number: 4 (lower is better)
Translates to: LGTMAFGIASFGIHTHPRPSSAQ*CCCGPV
Trigger: CACAGGACCACAGCAGCATCACTGAGCCGAGCTGGG...CCTGGGATGTGTGTGAATCCCAAAAGACGCAATCCCAAATGCCATAGTCCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR TCA 90 bp TCCTGTGCTGCCTTCTTCTCGAGCCAGGACAGCACAACTCACGCTCCTCTTGGTCTCCGTGTCCAGGTCTaGAAAATGGGGCTGACAACT +
Preference number: 4 (lower is better)
Translates to: SCAAFFSSQDSTTHAPLGLRVQV*KMGLTT
Trigger: AGTTGTCAGCCCCATTTTTCAGACCTGGACACGGAG...ACCAAGAGGAGCGTGAGTTGTGCTGTCCTGGCTCGAGAAGAAGGCAGCACAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR TCA 90 bp ATCTGGACGGGCCTGGTCAGAAGCCTTGCTGCACACTTTGGAACCTGTGATGTGAGAGGTTCTGGAGCTTaGGGAAGAGCAGGGCCTTTG +
Preference number: 4 (lower is better)
Translates to: IWTGLVRSLAAHFGTCDVRGSGA*GRAGPL
Trigger: CAAAGGCCCTGCTCTTCCTCAAGCTCCAGAACCTCT...CACATCACAGGTTCCAAAGTGTGCAGCAAGGCTTCTGACCAGGCCCGTCCAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR TCA 90 bp GACAGCGTGGAGGGAGTGGAGTCAAAAGCCTTTGTTACTTGCAGGCAGAGCCGAACTGCAGGAGCTCAGTaGGAGGTTCTGGAGCTTGAG +
Preference number: 4 (lower is better)
Translates to: DSVEGVESKAFVTCRQSRTAGAQ*EVLELE
Trigger: CTCAAGCTCCAGAACCTCTCACTGAGCTCCTGCAGT...TCGGCTCTGCCTGCAAGTAACAAAGGCTTTTGACTCCACTCCCTCCACGCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp AGCTGGTGGGTTCAGGCAAGGATGCCTCCACATGAACATGCTACCCTCTGCATGTGCCTGCCCCAGACATaGTGTCGTGAGTCTTGCACT +
Preference number: 4 (lower is better)
Translates to: SWWVQARMPPHEHATLCMCLPQT*CRESCT
Trigger: AGTGCAAGACTCACGACAGCATGTCTGGGGCAGGCA...CATGCAGAGGGTAGCATGTTCATGTGGAGGCATCCTTGCCTGAACCCACCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp GCTGAGGCCCAGGGAGAACAAATAAAGAAGGCAAACTGGTCTCTCTCTCAGAGCCCCCCACTCGGAAGCTaGATATGGACAGTGGCGTCC +
Preference number: 4 (lower is better)
Translates to: AEAQGEQIKKANWSLSQSPPLGS*IWTVAS
Trigger: GGACGCCACTGTCCATATGCAGCTTCCGAGTGGGGG...GCTCTGAGAGAGAGACCAGTTTGCCTTCTTTATTTGTTCTCCCTGGGCCTCAGC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp CTAGGTGTGGAAGATCCACCCTCAATGTTGGTGGGCAGCATTCAATCTGCTGAGCATCCCTGGACAGTGTaGCAGTCCCTTGTGTGGCCC +
Preference number: 4 (lower is better)
Translates to: LGVEDPPSMLVGSIQSAEHPWTV*QSLVWP
Trigger: GGGCCACACAAGGGACTGGCACACTGTCCAGGGATG...CTCAGCAGATTGAATGCTGCCCACCAACATTGAGGGTGGATCTTCCACACCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp ATCTGGACGGGCCTGGTCAGAAGCCTTGCTGCACACTTTGGAACCTGTGATGTGTCATGCTGGGGGAGCTaGTGGACTGTTTCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: IWTGLVRSLAAHFGTCDVSCWGS*WTVSAP
Trigger: TGGAGCAGAAACAGTCCAGCAGCTCCCCCAGCATGA...CACATCACAGGTTCCAAAGTGTGCAGCAAGGCTTCTGACCAGGCCCGTCCAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp TTGACACTTCATTCTTTCAACAAGGATTTACAGAGCGGCTACTCCCTCAGGTGCCACGGGCCAGGAGGCTaGAGCGGCATTCTGGGGCAC +
Preference number: 4 (lower is better)
Translates to: LTLHSFNKDLQSGYSLRCHGPGG*SGILGH
Trigger: GTGCCCCAGAATGCCGCTGCAGCCTCCTGGCCCGTG...GCACCTGAGGGAGTAGCCGCTCTGTAAATCCTTGTTGAAAGAATGAAGTGTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp GCTGAGGCCCAGGGAGAACAAATAAAGAAGGCAAACTGGTCTCTCTCTCAGAGCATGCTACCCTCTGCATaGCTGAGTCCTGCCACCCCC +
Preference number: 4 (lower is better)
Translates to: AEAQGEQIKKANWSLSQSMLPSA*LSPATP
Trigger: GGGGGTGGCAGGACTCAGGCATGCAGAGGGTAGCAT...GCTCTGAGAGAGAGACCAGTTTGCCTTCTTTATTTGTTCTCCCTGGGCCTCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp CTAGGTGTGGAAGATCCACCCTCAATGTTGGTGGGCAGCATTCAATCTGCTGAGCAGGGCGCACAGGGATaGATGATGCTGGCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: LGVEDPPSMLVGSIQSAEQGAQG*MMLAGS
Trigger: TGAGCCAGCCAGCATCATGCATCCCTGTGCGCCCTG...CTCAGCAGATTGAATGCTGCCCACCAACATTGAGGGTGGATCTTCCACACCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp CCAGCCACCTTCTCCCTTCATGGTTCTGAATGTCGGGGTGCTGCACATGTGTTGGGAGCAGAAATGCTGTaGGGACTCTGTCTCCGCAGA +
Preference number: 4 (lower is better)
Translates to: PATFSLHGSECRGAAHVLGAEML*GLCLRR
Trigger: TCTGCGGAGACAGAGTCCCCACAGCATTTCTGCTCC...CAACACATGTGCAGCACCCCGACATTCAGAACCATGAAGGGAGAAGGTGGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321420.5
CDS-3UTR CCA 90 bp TGCCAAGTTGACAAGGGGTGGACCTGTGGACTTCATTTTGGGTGTGAACTCGACTGCCCCAGCTGTGTGTaGGGTCTACTGGTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: CQVDKGWTCGLHFGCELDCPSCV*GLLVLC
Trigger: GCACAGCACCAGTAGACCCCACACACAGCTGGGGCA...GTCGAGTTCACACCCAAAATGAAGTCCACAGGTCCACCCCTTGTCAACTTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000321420.5
CDS-3UTR CCA 90 bp TTGACACTTCATTCTTTCAACAAGGATTTACAGAGCGGCTACTCCCTCAGGTGCCTGCGGGTCCCCCTTTaGGGTCCAGCTGCGCCCCTT +
Preference number: 4 (lower is better)
Translates to: LTLHSFNKDLQSGYSLRCLRVPL*GPAAPL
Trigger: AAGGGGCGCAGCTGGACCCCAAAGGGGGACCCGCAG...GCACCTGAGGGAGTAGCCGCTCTGTAAATCCTTGTTGAAAGAATGAAGTGTCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp CTTGGGACTATGGCATTTGGGATTGCGTCTTTTGGGATTCACACACATCCCAGGGTGTCCAGCCGGGATTaGTCCCTGTCTGTCCCCTGG +
Preference number: 4 (lower is better)
Translates to: LGTMAFGIASFGIHTHPRVSSRD*SLSVPW
Trigger: CCAGGGGACAGACAGGGACCAATCCCGGCTGGACAC...CCTGGGATGTGTGTGAATCCCAAAAGACGCAATCCCAAATGCCATAGTCCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp CTAGGTGTGGAAGATCCACCCTCAATGTTGGTGGGCAGCATTCAATCTGCTGAGCTGTGTCGATGGAGCTaGCTTTGGAGCCGCTGCGAG +
Preference number: 4 (lower is better)
Translates to: LGVEDPPSMLVGSIQSAELCRWS*LWSRCE
Trigger: CTCGCAGCGGCTCCAAAGCCAGCTCCATCGACACAG...CTCAGCAGATTGAATGCTGCCCACCAACATTGAGGGTGGATCTTCCACACCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp GCTGAGGCCCAGGGAGAACAAATAAAGAAGGCAAACTGGTCTCTCTCTCAGAGCGGCGGCAGGAGTGCCTaGGCTCTCAGCTTCCTTCTT +
Preference number: 4 (lower is better)
Translates to: AEAQGEQIKKANWSLSQSGGRSA*ALSFLL
Trigger: AAGAAGGAAGCTGAGAGCCCAGGCACTCCTGCCGCC...GCTCTGAGAGAGAGACCAGTTTGCCTTCTTTATTTGTTCTCCCTGGGCCTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp CTTGGGACTATGGCATTTGGGATTGCGTCTTTTGGGATTCACACACATCCCAGGGGTCATCATCTGGGCTaGGGCCAAGAGGACCCTCGC +
Preference number: 4 (lower is better)
Translates to: LGTMAFGIASFGIHTHPRGHHLG*GQEDPR
Trigger: GCGAGGGTCCTCTTGGCCCCAGCCCAGATGATGACC...CCTGGGATGTGTGTGAATCCCAAAAGACGCAATCCCAAATGCCATAGTCCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp CTAGGTGTGGAAGATCCACCCTCAATGTTGGTGGGCAGCATTCAATCTGCTGAGGCACAGGTCATCATCTaGGCTGGGGCCAAGAGGACC +
Preference number: 4 (lower is better)
Translates to: LGVEDPPSMLVGSIQSAEAQVII*AGAKRT
Trigger: GGTCCTCTTGGCCCCAGCCCAGATGATGACCTGTGC...CTCAGCAGATTGAATGCTGCCCACCAACATTGAGGGTGGATCTTCCACACCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp TTGACACTTCATTCTTTCAACAAGGATTTACAGAGCGGCTACTCCCTCAGGTGCGCCCATGTCTTGCCTTaGAGGCCATGCGGCCGGGGG +
Preference number: 4 (lower is better)
Translates to: LTLHSFNKDLQSGYSLRCAHVLP*RPCGRG
Trigger: CCCCCGGCCGCATGGCCTCCAAGGCAAGACATGGGC...GCACCTGAGGGAGTAGCCGCTCTGTAAATCCTTGTTGAAAGAATGAAGTGTCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp CTAGGTGTGGAAGATCCACCCTCAATGTTGGTGGGCAGCATTCAATCTGCTGAGGTAGGCCATGGATGGTaGTCATGCTGGGGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: LGVEDPPSMLVGSIQSAEVGHGW*SCWGSC
Trigger: GCAGCTCCCCCAGCATGACCACCATCCATGGCCTAC...CTCAGCAGATTGAATGCTGCCCACCAACATTGAGGGTGGATCTTCCACACCTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp ATCTGGACGGGCCTGGTCAGAAGCCTTGCTGCACACTTTGGAACCTGTGATGTGTCTGGTCCTGTGTGCTaGCTGAGTAGGGTAGGCCAT +
Preference number: 4 (lower is better)
Translates to: IWTGLVRSLAAHFGTCDVSGPVC*LSRVGH
Trigger: ATGGCCTACCCTACTCAGCCAGCACACAGGACCAGA...CACATCACAGGTTCCAAAGTGTGCAGCAAGGCTTCTGACCAGGCCCGTCCAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp TGCCAAGTTGACAAGGGGTGGACCTGTGGACTTCATTTTGGGTGTGAACTCGACGAGGCCCAGGCTTTCTaGATGGTGGCCCTGGGAACT +
Preference number: 4 (lower is better)
Translates to: CQVDKGWTCGLHFGCELDEAQAF*MVALGT
Trigger: AGTTCCCAGGGCCACCATCCAGAAAGCCTGGGCCTC...GTCGAGTTCACACCCAAAATGAAGTCCACAGGTCCACCCCTTGTCAACTTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp CTTGGGACTATGGCATTTGGGATTGCGTCTTTTGGGATTCACACACATCCCAGGGCTGCAGCGGCATTCTaGGGCACTTGCAGAGACCCC +
Preference number: 4 (lower is better)
Translates to: LGTMAFGIASFGIHTHPRAAAAF*GTCRDP
Trigger: GGGGTCTCTGCAAGTGCCCCAGAATGCCGCTGCAGC...CCTGGGATGTGTGTGAATCCCAAAAGACGCAATCCCAAATGCCATAGTCCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp TGCCAAGTTGACAAGGGGTGGACCTGTGGACTTCATTTTGGGTGTGAACTCGACAGCCTGTCCTACAGATaGGGCTCAGCCATGGCTGGC +
Preference number: 4 (lower is better)
Translates to: CQVDKGWTCGLHFGCELDSLSYR*GSAMAG
Trigger: GCCAGCCATGGCTGAGCCCCATCTGTAGGACAGGCT...GTCGAGTTCACACCCAAAATGAAGTCCACAGGTCCACCCCTTGTCAACTTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp CTTCGCGCTGTCTTTGGCGGTGGGCTGCCTGAGCTGGTGGGTTCAGGCAAGGATCAAGTTGACAAGGGGTaGACCTGTGGACTTCATTTT +
Preference number: 4 (lower is better)
Translates to: LRAVFGGGLPELVGSGKDQVDKG*TCGLHF
Trigger: AAAATGAAGTCCACAGGTCCACCCCTTGTCAACTTG...ATCCTTGCCTGAACCCACCAGCTCAGGCAGCCCACCGCCAAAGACAGCGCGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp ATCTGGACGGGCCTGGTCAGAAGCCTTGCTGCACACTTTGGAACCTGTGATGTGGGCGATCTGACAGCGTaGAGGGAGTGGAGTCAAAAG +
Preference number: 4 (lower is better)
Translates to: IWTGLVRSLAAHFGTCDVGDLTA*REWSQK
Trigger: CTTTTGACTCCACTCCCTCCACGCTGTCAGATCGCC...CACATCACAGGTTCCAAAGTGTGCAGCAAGGCTTCTGACCAGGCCCGTCCAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp CTTGGGACTATGGCATTTGGGATTGCGTCTTTTGGGATTCACACACATCCCAGGTGTCCCTGCACCTGCTaGCCTGACACTGGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: LGTMAFGIASFGIHTHPRCPCTC*PDTGPG
Trigger: TCCTGGGCCAGTGTCAGGCCAGCAGGTGCAGGGACA...CCTGGGATGTGTGTGAATCCCAAAAGACGCAATCCCAAATGCCATAGTCCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp ATCTGGACGGGCCTGGTCAGAAGCCTTGCTGCACACTTTGGAACCTGTGATGTGCTTGGAGAATGTGGATaGCCCATCTGTCCCTGCACC +
Preference number: 4 (lower is better)
Translates to: IWTGLVRSLAAHFGTCDVLGECG*PICPCT
Trigger: GGTGCAGGGACAGATGGGCCATCCACATTCTCCAAG...CACATCACAGGTTCCAAAGTGTGCAGCAAGGCTTCTGACCAGGCCCGTCCAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp AGCTGGTGGGTTCAGGCAAGGATGCCTCCACATGAACATGCTACCCTCTGCATGTGTGGAGCCCAATCCTaGCATCTTGCTGAGGTGTGC +
Preference number: 4 (lower is better)
Translates to: SWWVQARMPPHEHATLCMCGAQS*HLAEVC
Trigger: GCACACCTCAGCAAGATGCCAGGATTGGGCTCCACA...CATGCAGAGGGTAGCATGTTCATGTGGAGGCATCCTTGCCTGAACCCACCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp ATCTGGACGGGCCTGGTCAGAAGCCTTGCTGCACACTTTGGAACCTGTGATGTGTGTGGAGCCCAATCCTaGCATCTTGCTGAGGTGTGC +
Preference number: 4 (lower is better)
Translates to: IWTGLVRSLAAHFGTCDVCGAQS*HLAEVC
Trigger: GCACACCTCAGCAAGATGCCAGGATTGGGCTCCACA...CACATCACAGGTTCCAAAGTGTGCAGCAAGGCTTCTGACCAGGCCCGTCCAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp TCCTGTGCTGCCTTCTTCTCGAGCCAGGACAGCACAACTCACGCTCCTCTTGGTTTTCATGGCTGCCTGTaGAGCCCAATCCTGGCATCT +
Preference number: 4 (lower is better)
Translates to: SCAAFFSSQDSTTHAPLGFHGCL*SPILAS
Trigger: AGATGCCAGGATTGGGCTCCACAGGCAGCCATGAAA...ACCAAGAGGAGCGTGAGTTGTGCTGTCCTGGCTCGAGAAGAAGGCAGCACAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp CCTCAGCTACAGATCCTGTGCTGCCTTCTTCTCGAGCCAGGACAGCACAACTCATCACGCTCCTCTTGGTaGGAGCTCTGCATGAGATGG +
Preference number: 4 (lower is better)
Translates to: PQLQILCCLLLEPGQHNSSRSSW*ELCMRW
Trigger: CCATCTCATGCAGAGCTCCCACCAAGAGGAGCGTGA...TGAGTTGTGCTGTCCTGGCTCGAGAAGAAGGCAGCACAGGATCTGTAGCTGAGG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp CCTCAGCTACAGATCCTGTGCTGCCTTCTTCTCGAGCCAGGACAGCACAACTCAGGGTGCTCTGACATCTaGAGCCTGAAAGCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: PQLQILCCLLLEPGQHNSGCSDI*SLKAGR
Trigger: CCTTCCTGCTTTCAGGCTCCAGATGTCAGAGCACCC...TGAGTTGTGCTGTCCTGGCTCGAGAAGAAGGCAGCACAGGATCTGTAGCTGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR CAA 72 bp TCTCTCAGAGCTGGGACAGGCTTTTCTTCCACTGCCTaGACATCAGAGCTTCAGGCTCGCTGGCCTTTGGAC +
Preference number: 4 (lower is better)
Translates to: SLRAGTGFSSTA*TSELQARWPLD
Trigger: GTCCAAAGGCCAGCGAGCCTGAAGCTCTGATGTCAAGGCAGTGGAAGAAAAGCCTGTCCCAGCTCTGAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR TCA 90 bp AAGGGATACCTAGAGACCTGGGAGATCATTATTCTGGGCATGTCTGTGAGGTGTCCTCCCCACAACCCGTaGGCGAGTCGAAGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: KGYLETWEIIILGMSVRCPPHNP*ASRSSG
Trigger: TCCAGAGCTTCGACTCGCTCACGGGTTGTGGGGAGG...ACACCTCACAGACATGCCCAGAATAATGATCTCCCAGGTCTCTAGGTATCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR TCA 90 bp CTTGGGACTATGGCATTTGGGATTGCGTCTTTTGGGATTCACACACATCCCAGGCGGGGGCTGTTCGTTTaGGCTGATCTTCAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: LGTMAFGIASFGIHTHPRRGLFV*ADLQGC
Trigger: GCAGCCCTGAAGATCAGCTCAAACGAACAGCCCCCG...CCTGGGATGTGTGTGAATCCCAAAAGACGCAATCCCAAATGCCATAGTCCCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR TCA 90 bp TTGACACTTCATTCTTTCAACAAGGATTTACAGAGCGGCTACTCCCTCAGGTGCTGGCGGTGGGCTGCCTaGGCTGGTGGGTTCAGGCAA +
Preference number: 4 (lower is better)
Translates to: LTLHSFNKDLQSGYSLRCWRWAA*AGGFRQ
Trigger: TTGCCTGAACCCACCAGCTCAGGCAGCCCACCGCCA...GCACCTGAGGGAGTAGCCGCTCTGTAAATCCTTGTTGAAAGAATGAAGTGTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR TCA 90 bp AAGGGATACCTAGAGACCTGGGAGATCATTATTCTGGGCATGTCTGTGAGGTGTCCCAGCTCGGCTCAGTaGTGCTGCTGTGGTCCTGTG +
Preference number: 4 (lower is better)
Translates to: KGYLETWEIIILGMSVRCPSSAQ*CCCGPV
Trigger: CACAGGACCACAGCAGCATCACTGAGCCGAGCTGGG...ACACCTCACAGACATGCCCAGAATAATGATCTCCCAGGTCTCTAGGTATCCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR TCA 90 bp CTAGGTGTGGAAGATCCACCCTCAATGTTGGTGGGCAGCATTCAATCTGCTGAGCACCCAAGGGTGCTCTaGCATCTGGAGCCTGAAAGC +
Preference number: 4 (lower is better)
Translates to: LGVEDPPSMLVGSIQSAEHPRVL*HLEPES
Trigger: GCTTTCAGGCTCCAGATGTCAGAGCACCCTTGGGTG...CTCAGCAGATTGAATGCTGCCCACCAACATTGAGGGTGGATCTTCCACACCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp AAGGGATACCTAGAGACCTGGGAGATCATTATTCTGGGCATGTCTGTGAGGTGTGCTCCATGCTGCCAGTaGCCCAGCTGTGTGTGGGGT +
Preference number: 4 (lower is better)
Translates to: KGYLETWEIIILGMSVRCAPCCQ*PSCVWG
Trigger: ACCCCACACACAGCTGGGGCACTGGCAGCATGGAGC...ACACCTCACAGACATGCCCAGAATAATGATCTCCCAGGTCTCTAGGTATCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321420.5
CDS-3UTR GCA 90 bp GCTGAGGCCCAGGGAGAACAAATAAAGAAGGCAAACTGGTCTCTCTCTCAGAGCTCTTCAGCTCCATGCTaGCAGTGCCCCAGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: AEAQGEQIKKANWSLSQSSSAPC*QCPSCV
Trigger: CACACAGCTGGGGCACTGGCAGCATGGAGCTGAAGA...GCTCTGAGAGAGAGACCAGTTTGCCTTCTTTATTTGTTCTCCCTGGGCCTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321420.5
CDS-3UTR GCA 90 bp CTAGGTGTGGAAGATCCACCCTCAATGTTGGTGGGCAGCATTCAATCTGCTGAGACCTCTGGTCCTGTGTaGTGGCTGAGTAGGGTAGGC +
Preference number: 4 (lower is better)
Translates to: LGVEDPPSMLVGSIQSAETSGPV*WLSRVG
Trigger: GCCTACCCTACTCAGCCAGCACACAGGACCAGAGGT...CTCAGCAGATTGAATGCTGCCCACCAACATTGAGGGTGGATCTTCCACACCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp GCTGAGGCCCAGGGAGAACAAATAAAGAAGGCAAACTGGTCTCTCTCTCAGAGCCCAAGACTGTGCCACTaGACTCCCATTCCCACCTGG +
Preference number: 4 (lower is better)
Translates to: AEAQGEQIKKANWSLSQSPRLCH*TPIPTW
Trigger: CCAGGTGGGAATGGGAGTGCAGTGGCACAGTCTTGG...GCTCTGAGAGAGAGACCAGTTTGCCTTCTTTATTTGTTCTCCCTGGGCCTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp TGCCAAGTTGACAAGGGGTGGACCTGTGGACTTCATTTTGGGTGTGAACTCGACCCAGGAGGTAGAGGCTaGAGTGAGCCAAGACTGTGC +
Preference number: 4 (lower is better)
Translates to: CQVDKGWTCGLHFGCELDPGGRG*SEPRLC
Trigger: GCACAGTCTTGGCTCACTGCAGCCTCTACCTCCTGG...GTCGAGTTCACACCCAAAATGAAGTCCACAGGTCCACCCCTTGTCAACTTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp AGCTGGTGGGTTCAGGCAAGGATGCCTCCACATGAACATGCTACCCTCTGCATGAACCCATTTCATGGCTaGCTGTGGAGCCCAATCCTG +
Preference number: 4 (lower is better)
Translates to: SWWVQARMPPHEHATLCMNPFHG*LWSPIL
Trigger: CAGGATTGGGCTCCACAGGCAGCCATGAAATGGGTT...CATGCAGAGGGTAGCATGTTCATGTGGAGGCATCCTTGCCTGAACCCACCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp CCTCAGCTACAGATCCTGTGCTGCCTTCTTCTCGAGCCAGGACAGCACAACTCACAGCTACAGATCCTGTaGTGCCTTCTTCTCGAGCCA +
Preference number: 4 (lower is better)
Translates to: PQLQILCCLLLEPGQHNSQLQIL*CLLLEP
Trigger: TGGCTCGAGAAGAAGGCAGCACAGGATCTGTAGCTG...TGAGTTGTGCTGTCCTGGCTCGAGAAGAAGGCAGCACAGGATCTGTAGCTGAGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp CCTCAGCTACAGATCCTGTGCTGCCTTCTTCTCGAGCCAGGACAGCACAACTCACCTGGTCAGAAGCCTTaGTGCACACTTTGGAACCTG +
Preference number: 4 (lower is better)
Translates to: PQLQILCCLLLEPGQHNSPGQKP*CTLWNL
Trigger: CAGGTTCCAAAGTGTGCAGCAAGGCTTCTGACCAGG...TGAGTTGTGCTGTCCTGGCTCGAGAAGAAGGCAGCACAGGATCTGTAGCTGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp AGCTGGTGGGTTCAGGCAAGGATGCCTCCACATGAACATGCTACCCTCTGCATGGCTGCGCCCCTTTGTTaGGGCATCTGTCGTATTCTT +
Preference number: 4 (lower is better)
Translates to: SWWVQARMPPHEHATLCMAAPLC*GICRIL
Trigger: AAGAATACGACAGATGCCCCAACAAAGGGGCGCAGC...CATGCAGAGGGTAGCATGTTCATGTGGAGGCATCCTTGCCTGAACCCACCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp CTAGGTGTGGAAGATCCACCCTCAATGTTGGTGGGCAGCATTCAATCTGCTGAGAGCCCTCGTCACTTGTaGACACGGATTCGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: LGVEDPPSMLVGSIQSAESPRHL*TRIRAA
Trigger: AGCAGCCCGAATCCGTGTCCACAAGTGACGAGGGCT...CTCAGCAGATTGAATGCTGCCCACCAACATTGAGGGTGGATCTTCCACACCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp CTTGGGACTATGGCATTTGGGATTGCGTCTTTTGGGATTCACACACATCCCAGGCTCTGTAGGAAGCCCTaGCTGAGCAGGTCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: LGTMAFGIASFGIHTHPRLCRKP*LSRSGP
Trigger: AGGCCCTGACCTGCTCAGCCAGGGCTTCCTACAGAG...CCTGGGATGTGTGTGAATCCCAAAAGACGCAATCCCAAATGCCATAGTCCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp CTAGGTGTGGAAGATCCACCCTCAATGTTGGTGGGCAGCATTCAATCTGCTGAGACAGCTCCTGCCTGCTaGGTGCTGAGCAAACTGTCG +
Preference number: 4 (lower is better)
Translates to: LGVEDPPSMLVGSIQSAETAPAC*VLSKLS
Trigger: CGACAGTTTGCTCAGCACCCAGCAGGCAGGAGCTGT...CTCAGCAGATTGAATGCTGCCCACCAACATTGAGGGTGGATCTTCCACACCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp TTGACACTTCATTCTTTCAACAAGGATTTACAGAGCGGCTACTCCCTCAGGTGCTGCCAGTCCCTTGTGTaGCCCCTCCGAGGGCCTTGC +
Preference number: 4 (lower is better)
Translates to: LTLHSFNKDLQSGYSLRCCQSLV*PLRGPC
Trigger: GCAAGGCCCTCGGAGGGGCCACACAAGGGACTGGCA...GCACCTGAGGGAGTAGCCGCTCTGTAAATCCTTGTTGAAAGAATGAAGTGTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp GCTGAGGCCCAGGGAGAACAAATAAAGAAGGCAAACTGGTCTCTCTCTCAGAGCCTCGAGAGGCATCCCTaGACAGTGTGCCAGTCCCTT +
Preference number: 4 (lower is better)
Translates to: AEAQGEQIKKANWSLSQSLERHP*TVCQSL
Trigger: AAGGGACTGGCACACTGTCCAGGGATGCCTCTCGAG...GCTCTGAGAGAGAGACCAGTTTGCCTTCTTTATTTGTTCTCCCTGGGCCTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp TGCCAAGTTGACAAGGGGTGGACCTGTGGACTTCATTTTGGGTGTGAACTCGACCACAGCCTGCCAGCATaGGCTCTGCATCCAGAGTGT +
Preference number: 4 (lower is better)
Translates to: CQVDKGWTCGLHFGCELDHSLPA*ALHPEC
Trigger: ACACTCTGGATGCAGAGCCCATGCTGGCAGGCTGTG...GTCGAGTTCACACCCAAAATGAAGTCCACAGGTCCACCCCTTGTCAACTTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp TGCCAAGTTGACAAGGGGTGGACCTGTGGACTTCATTTTGGGTGTGAACTCGACTGCTGGGGGAGCTGCTaGACTGTTTCTGCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: CQVDKGWTCGLHFGCELDCWGSC*TVSAPA
Trigger: TGCTGGAGCAGAAACAGTCCAGCAGCTCCCCCAGCA...GTCGAGTTCACACCCAAAATGAAGTCCACAGGTCCACCCCTTGTCAACTTGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp TGCCAAGTTGACAAGGGGTGGACCTGTGGACTTCATTTTGGGTGTGAACTCGACGGATGGTGGTCATGCTaGGGGAGCTGCTGGACTGTT +
Preference number: 4 (lower is better)
Translates to: CQVDKGWTCGLHFGCELDGWWSC*GSCWTV
Trigger: AACAGTCCAGCAGCTCCCCCAGCATGACCACCATCC...GTCGAGTTCACACCCAAAATGAAGTCCACAGGTCCACCCCTTGTCAACTTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp GCTGAGGCCCAGGGAGAACAAATAAAGAAGGCAAACTGGTCTCTCTCTCAGAGCCGATCTCGACACCTCTaGTCCTGTGTGCTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: AEAQGEQIKKANWSLSQSRSRHL*SCVLAE
Trigger: CTCAGCCAGCACACAGGACCAGAGGTGTCGAGATCG...GCTCTGAGAGAGAGACCAGTTTGCCTTCTTTATTTGTTCTCCCTGGGCCTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp AAGGGATACCTAGAGACCTGGGAGATCATTATTCTGGGCATGTCTGTGAGGTGTGCTGCAGCGGCATTCTaGGGCACTTGCAGAGACCCC +
Preference number: 4 (lower is better)
Translates to: KGYLETWEIIILGMSVRCAAAAF*GTCRDP
Trigger: GGGGTCTCTGCAAGTGCCCCAGAATGCCGCTGCAGC...ACACCTCACAGACATGCCCAGAATAATGATCTCCCAGGTCTCTAGGTATCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp TTGACACTTCATTCTTTCAACAAGGATTTACAGAGCGGCTACTCCCTCAGGTGCAGAGGCCCCCACTTCTaGCTGGCCACAGAGGAGGCC +
Preference number: 4 (lower is better)
Translates to: LTLHSFNKDLQSGYSLRCRGPHF*LATEEA
Trigger: GGCCTCCTCTGTGGCCAGCCAGAAGTGGGGGCCTCT...GCACCTGAGGGAGTAGCCGCTCTGTAAATCCTTGTTGAAAGAATGAAGTGTCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp GACAGCGTGGAGGGAGTGGAGTCAAAAGCCTTTGTTACTTGCAGGCAGAGCCGATTTCCTGAAGGGGAATaGCGATCTGACAGCGTGGAG +
Preference number: 4 (lower is better)
Translates to: DSVEGVESKAFVTCRQSRFPEGE*RSDSVE
Trigger: CTCCACGCTGTCAGATCGCCATTCCCCTTCAGGAAA...TCGGCTCTGCCTGCAAGTAACAAAGGCTTTTGACTCCACTCCCTCCACGCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp AGCTGGTGGGTTCAGGCAAGGATGCCTCCACATGAACATGCTACCCTCTGCATGTTTCATGGCTGCCTGTaGAGCCCAATCCTGGCATCT +
Preference number: 4 (lower is better)
Translates to: SWWVQARMPPHEHATLCMFHGCL*SPILAS
Trigger: AGATGCCAGGATTGGGCTCCACAGGCAGCCATGAAA...CATGCAGAGGGTAGCATGTTCATGTGGAGGCATCCTTGCCTGAACCCACCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp TGCCAAGTTGACAAGGGGTGGACCTGTGGACTTCATTTTGGGTGTGAACTCGACAGATCTGGACGGGCCTaGTCAGAAGCCTTGCTGCAC +
Preference number: 4 (lower is better)
Translates to: CQVDKGWTCGLHFGCELDRSGRA*SEALLH
Trigger: GTGCAGCAAGGCTTCTGACCAGGCCCGTCCAGATCT...GTCGAGTTCACACCCAAAATGAAGTCCACAGGTCCACCCCTTGTCAACTTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR TCA 90 bp GACAGCGTGGAGGGAGTGGAGTCAAAAGCCTTTGTTACTTGCAGGCAGAGCCGAAACAAGCCTTCAGAGTaGCCTCGTGTCTCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: DSVEGVESKAFVTCRQSRNKPSE*PRVSSS
Trigger: AGAGGAAGAGACACGAGGTCACTCTGAAGGCTTGTT...TCGGCTCTGCCTGCAAGTAACAAAGGCTTTTGACTCCACTCCCTCCACGCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR TCA 90 bp CTAGGTGTGGAAGATCCACCCTCAATGTTGGTGGGCAGCATTCAATCTGCTGAGGCTGTTCGTTTGAGCTaGTCTTCAGGGCTGCCACAC +
Preference number: 4 (lower is better)
Translates to: LGVEDPPSMLVGSIQSAEAVRLS*SSGLPH
Trigger: GTGTGGCAGCCCTGAAGATCAGCTCAAACGAACAGC...CTCAGCAGATTGAATGCTGCCCACCAACATTGAGGGTGGATCTTCCACACCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR TCA 90 bp CTAGGTGTGGAAGATCCACCCTCAATGTTGGTGGGCAGCATTCAATCTGCTGAGGCTGGCTGTTCAAAGTaGGGCCCAGGCTTTCTGGAT +
Preference number: 4 (lower is better)
Translates to: LGVEDPPSMLVGSIQSAEAGCSK*GPGFLD
Trigger: ATCCAGAAAGCCTGGGCCTCACTTTGAACAGCCAGC...CTCAGCAGATTGAATGCTGCCCACCAACATTGAGGGTGGATCTTCCACACCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR TCA 90 bp TGCCAAGTTGACAAGGGGTGGACCTGTGGACTTCATTTTGGGTGTGAACTCGACAGTTCCTGGTGCATGTaGGCCTGTCCTACAGATGGG +
Preference number: 4 (lower is better)
Translates to: CQVDKGWTCGLHFGCELDSSWCM*ACPTDG
Trigger: CCCATCTGTAGGACAGGCTCACATGCACCAGGAACT...GTCGAGTTCACACCCAAAATGAAGTCCACAGGTCCACCCCTTGTCAACTTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR TCA 90 bp CCAGCCACCTTCTCCCTTCATGGTTCTGAATGTCGGGGTGCTGCACATGTGTTGAAGGATGCCTCCACATaGACATGCTACCCTCTGCAT +
Preference number: 4 (lower is better)
Translates to: PATFSLHGSECRGAAHVLKDAST*TCYPLH
Trigger: ATGCAGAGGGTAGCATGTTCATGTGGAGGCATCCTT...CAACACATGTGCAGCACCCCGACATTCAGAACCATGAAGGGAGAAGGTGGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR TCA 90 bp AGCTGGTGGGTTCAGGCAAGGATGCCTCCACATGAACATGCTACCCTCTGCATGCAGCATTCAATCTGCTaGGGCCCAGGGAGAACAAAT +
Preference number: 4 (lower is better)
Translates to: SWWVQARMPPHEHATLCMQHSIC*GPGRTN
Trigger: ATTTGTTCTCCCTGGGCCTCAGCAGATTGAATGCTG...CATGCAGAGGGTAGCATGTTCATGTGGAGGCATCCTTGCCTGAACCCACCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR TCA 90 bp TGCCAAGTTGACAAGGGGTGGACCTGTGGACTTCATTTTGGGTGTGAACTCGACGTAATACAATGTTCCTaGGGGGACGCCCTTCAGGCC +
Preference number: 4 (lower is better)
Translates to: CQVDKGWTCGLHFGCELDVIQCS*GDALQA
Trigger: GGCCTGAAGGGCGTCCCCTCAGGAACATTGTATTAC...GTCGAGTTCACACCCAAAATGAAGTCCACAGGTCCACCCCTTGTCAACTTGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR TCA 90 bp TGCCAAGTTGACAAGGGGTGGACCTGTGGACTTCATTTTGGGTGTGAACTCGACGGTGGGAGCTCTGCATaGGATGGGATTTCCCTAGCA +
Preference number: 4 (lower is better)
Translates to: CQVDKGWTCGLHFGCELDGGSSA*DGISLA
Trigger: TGCTAGGGAAATCCCATCTCATGCAGAGCTCCCACC...GTCGAGTTCACACCCAAAATGAAGTCCACAGGTCCACCCCTTGTCAACTTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR TCA 90 bp CTAGGTGTGGAAGATCCACCCTCAATGTTGGTGGGCAGCATTCAATCTGCTGAGACTGCAGGAGCTCAGTaGGAGGTTCTGGAGCTTGAG +
Preference number: 4 (lower is better)
Translates to: LGVEDPPSMLVGSIQSAETAGAQ*EVLELE
Trigger: CTCAAGCTCCAGAACCTCTCACTGAGCTCCTGCAGT...CTCAGCAGATTGAATGCTGCCCACCAACATTGAGGGTGGATCTTCCACACCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp CTTGGGACTATGGCATTTGGGATTGCGTCTTTTGGGATTCACACACATCCCAGGGGTCTACTGGTGCTGTaGTCTGCCGCAGTCTTGAGG +
Preference number: 4 (lower is better)
Translates to: LGTMAFGIASFGIHTHPRGLLVL*SAAVLR
Trigger: CCTCAAGACTGCGGCAGAGCACAGCACCAGTAGACC...CCTGGGATGTGTGTGAATCCCAAAAGACGCAATCCCAAATGCCATAGTCCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321420.5
CDS-3UTR GCA 90 bp TGCCAAGTTGACAAGGGGTGGACCTGTGGACTTCATTTTGGGTGTGAACTCGACTCAGCAGGCACTCCTTaGCCTTCCAGGAGCTCTGTA +
Preference number: 4 (lower is better)
Translates to: CQVDKGWTCGLHFGCELDSAGTP*PSRSSV
Trigger: TACAGAGCTCCTGGAAGGGCAAGGAGTGCCTGCTGA...GTCGAGTTCACACCCAAAATGAAGTCCACAGGTCCACCCCTTGTCAACTTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp CTTGGGACTATGGCATTTGGGATTGCGTCTTTTGGGATTCACACACATCCCAGGTGCCAGCATGGGCTCTaGATCCAGAGTGTCACCTCC +
Preference number: 4 (lower is better)
Translates to: LGTMAFGIASFGIHTHPRCQHGL*IQSVTS
Trigger: GGAGGTGACACTCTGGATGCAGAGCCCATGCTGGCA...CCTGGGATGTGTGTGAATCCCAAAAGACGCAATCCCAAATGCCATAGTCCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp TTGACACTTCATTCTTTCAACAAGGATTTACAGAGCGGCTACTCCCTCAGGTGCTTGCCTTGGAGGCCATaGGGCCGGGGGCTGTTCGTT +
Preference number: 4 (lower is better)
Translates to: LTLHSFNKDLQSGYSLRCLPWRP*GRGLFV
Trigger: AACGAACAGCCCCCGGCCGCATGGCCTCCAAGGCAA...GCACCTGAGGGAGTAGCCGCTCTGTAAATCCTTGTTGAAAGAATGAAGTGTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp CTAGGTGTGGAAGATCCACCCTCAATGTTGGTGGGCAGCATTCAATCTGCTGAGGAACATGCTACCCTCTaGATGCCTGAGTCCTGCCAC +
Preference number: 4 (lower is better)
Translates to: LGVEDPPSMLVGSIQSAEEHATL*MPESCH
Trigger: GTGGCAGGACTCAGGCATGCAGAGGGTAGCATGTTC...CTCAGCAGATTGAATGCTGCCCACCAACATTGAGGGTGGATCTTCCACACCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp GACAGCGTGGAGGGAGTGGAGTCAAAAGCCTTTGTTACTTGCAGGCAGAGCCGATCTTGGTGGGAGCTCTaGATGAGATGGGATTTCCCT +
Preference number: 4 (lower is better)
Translates to: DSVEGVESKAFVTCRQSRSWWEL*MRWDFP
Trigger: AGGGAAATCCCATCTCATGCAGAGCTCCCACCAAGA...TCGGCTCTGCCTGCAAGTAACAAAGGCTTTTGACTCCACTCCCTCCACGCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp CCTCAGCTACAGATCCTGTGCTGCCTTCTTCTCGAGCCAGGACAGCACAACTCATCTTGGTGGGAGCTCTaGATGAGATGGGATTTCCCT +
Preference number: 4 (lower is better)
Translates to: PQLQILCCLLLEPGQHNSSWWEL*MRWDFP
Trigger: AGGGAAATCCCATCTCATGCAGAGCTCCCACCAAGA...TGAGTTGTGCTGTCCTGGCTCGAGAAGAAGGCAGCACAGGATCTGTAGCTGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp TTGACACTTCATTCTTTCAACAAGGATTTACAGAGCGGCTACTCCCTCAGGTGCTGCAGCCACGGCTGCTaGGTCTGGGGGTTTCTCGTG +
Preference number: 4 (lower is better)
Translates to: LTLHSFNKDLQSGYSLRCCSHGC*VWGFLV
Trigger: CACGAGAAACCCCCAGACCCAGCAGCCGTGGCTGCA...GCACCTGAGGGAGTAGCCGCTCTGTAAATCCTTGTTGAAAGAATGAAGTGTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp TTGACACTTCATTCTTTCAACAAGGATTTACAGAGCGGCTACTCCCTCAGGTGCCGTATTCTTGGGCACTaGGGCTGGCTTGGGGGCCCT +
Preference number: 4 (lower is better)
Translates to: LTLHSFNKDLQSGYSLRCRILGH*GWLGGP
Trigger: AGGGCCCCCAAGCCAGCCCCAGTGCCCAAGAATACG...GCACCTGAGGGAGTAGCCGCTCTGTAAATCCTTGTTGAAAGAATGAAGTGTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp CTAGGTGTGGAAGATCCACCCTCAATGTTGGTGGGCAGCATTCAATCTGCTGAGCATCTGTCGTATTCTTaGGCACTGGGGCTGGCTTGG +
Preference number: 4 (lower is better)
Translates to: LGVEDPPSMLVGSIQSAEHLSYS*ALGLAW
Trigger: CCAAGCCAGCCCCAGTGCCCAAGAATACGACAGATG...CTCAGCAGATTGAATGCTGCCCACCAACATTGAGGGTGGATCTTCCACACCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp TTGACACTTCATTCTTTCAACAAGGATTTACAGAGCGGCTACTCCCTCAGGTGCGGCCCAGGCTCCTTCTaGGAGCAGGGCCAGGTAGAA +
Preference number: 4 (lower is better)
Translates to: LTLHSFNKDLQSGYSLRCGPGSF*EQGQVE
Trigger: TTCTACCTGGCCCTGCTCCCAGAAGGAGCCTGGGCC...GCACCTGAGGGAGTAGCCGCTCTGTAAATCCTTGTTGAAAGAATGAAGTGTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp AAGGGATACCTAGAGACCTGGGAGATCATTATTCTGGGCATGTCTGTGAGGTGTAGCCTGTCCTACAGATaGGGCTCAGCCATGGCTGGC +
Preference number: 4 (lower is better)
Translates to: KGYLETWEIIILGMSVRCSLSYR*GSAMAG
Trigger: GCCAGCCATGGCTGAGCCCCATCTGTAGGACAGGCT...ACACCTCACAGACATGCCCAGAATAATGATCTCCCAGGTCTCTAGGTATCCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp GACAGCGTGGAGGGAGTGGAGTCAAAAGCCTTTGTTACTTGCAGGCAGAGCCGACACCCTCAATGTTGGTaGGCAGCATTCAATCTGCTG +
Preference number: 4 (lower is better)
Translates to: DSVEGVESKAFVTCRQSRHPQCW*AAFNLL
Trigger: CAGCAGATTGAATGCTGCCCACCAACATTGAGGGTG...TCGGCTCTGCCTGCAAGTAACAAAGGCTTTTGACTCCACTCCCTCCACGCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp TTGACACTTCATTCTTTCAACAAGGATTTACAGAGCGGCTACTCCCTCAGGTGCGCGAGTAGGCCAGACTaGGGCCAGATTGAGGCCGGT +
Preference number: 4 (lower is better)
Translates to: LTLHSFNKDLQSGYSLRCASRPD*GQIEAG
Trigger: ACCGGCCTCAATCTGGCCCCAGTCTGGCCTACTCGC...GCACCTGAGGGAGTAGCCGCTCTGTAAATCCTTGTTGAAAGAATGAAGTGTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp GACAGCGTGGAGGGAGTGGAGTCAAAAGCCTTTGTTACTTGCAGGCAGAGCCGACAGAAACCCATTTCATaGCTGCCTGTGGAGCCCAAT +
Preference number: 4 (lower is better)
Translates to: DSVEGVESKAFVTCRQSRQKPIS*LPVEPN
Trigger: ATTGGGCTCCACAGGCAGCCATGAAATGGGTTTCTG...TCGGCTCTGCCTGCAAGTAACAAAGGCTTTTGACTCCACTCCCTCCACGCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp TTGACACTTCATTCTTTCAACAAGGATTTACAGAGCGGCTACTCCCTCAGGTGCCTGGAGGGCCACTTGTaGCTGGCACCCAAGGGTGCT +
Preference number: 4 (lower is better)
Translates to: LTLHSFNKDLQSGYSLRCLEGHL*LAPKGA
Trigger: AGCACCCTTGGGTGCCAGCCACAAGTGGCCCTCCAG...GCACCTGAGGGAGTAGCCGCTCTGTAAATCCTTGTTGAAAGAATGAAGTGTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR CAA 72 bp CAGCGTGGAGGGAGTGGAGTCAAAAGCCTTTGTTACTaGCAGGCAGAGCCGAGGAGAATCCATTGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: QRGGSGVKSLCY*QAEPRRIHWLL
Trigger: AAGAAGCCAATGGATTCTCCTCGGCTCTGCCTGCAAGTAACAAAGGCTTTTGACTCCACTCCCTCCACGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR TCA 90 bp TTGACACTTCATTCTTTCAACAAGGATTTACAGAGCGGCTACTCCCTCAGGTGCCGGGGGCTGTTCGTTTaGGCTGATCTTCAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: LTLHSFNKDLQSGYSLRCRGLFV*ADLQGC
Trigger: GCAGCCCTGAAGATCAGCTCAAACGAACAGCCCCCG...GCACCTGAGGGAGTAGCCGCTCTGTAAATCCTTGTTGAAAGAATGAAGTGTCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR TCA 90 bp CTTGGGACTATGGCATTTGGGATTGCGTCTTTTGGGATTCACACACATCCCAGGGCTGGCTGTTCAAAGTaGGGCCCAGGCTTTCTGGAT +
Preference number: 4 (lower is better)
Translates to: LGTMAFGIASFGIHTHPRAGCSK*GPGFLD
Trigger: ATCCAGAAAGCCTGGGCCTCACTTTGAACAGCCAGC...CCTGGGATGTGTGTGAATCCCAAAAGACGCAATCCCAAATGCCATAGTCCCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR TCA 90 bp TTGACACTTCATTCTTTCAACAAGGATTTACAGAGCGGCTACTCCCTCAGGTGCTCTCCAGCCCCTGCATaGGGAGCAGCTAGGTGGTTG +
Preference number: 4 (lower is better)
Translates to: LTLHSFNKDLQSGYSLRCSPAPA*GAARWL
Trigger: CAACCACCTAGCTGCTCCTCATGCAGGGGCTGGAGA...GCACCTGAGGGAGTAGCCGCTCTGTAAATCCTTGTTGAAAGAATGAAGTGTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR TCA 90 bp TCCTGTGCTGCCTTCTTCTCGAGCCAGGACAGCACAACTCACGCTCCTCTTGGTGGGAGGCTGAGATTTTaGGACATTTTAGTTGAGGAG +
Preference number: 4 (lower is better)
Translates to: SCAAFFSSQDSTTHAPLGGRLRF*DILVEE
Trigger: CTCCTCAACTAAAATGTCTCAAAATCTCAGCCTCCC...ACCAAGAGGAGCGTGAGTTGTGCTGTCCTGGCTCGAGAAGAAGGCAGCACAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR TCA 90 bp TTGACACTTCATTCTTTCAACAAGGATTTACAGAGCGGCTACTCCCTCAGGTGCAGGGGAATGGCGATCTaGCAGCGTGGAGGGAGTGGA +
Preference number: 4 (lower is better)
Translates to: LTLHSFNKDLQSGYSLRCRGMAI*QRGGSG
Trigger: TCCACTCCCTCCACGCTGTCAGATCGCCATTCCCCT...GCACCTGAGGGAGTAGCCGCTCTGTAAATCCTTGTTGAAAGAATGAAGTGTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR TCA 90 bp CTAGGTGTGGAAGATCCACCCTCAATGTTGGTGGGCAGCATTCAATCTGCTGAGCCCCTTTTCCTGTGCTaGTCTTTCCTCCAGAAACCC +
Preference number: 4 (lower is better)
Translates to: LGVEDPPSMLVGSIQSAEPLFLC*SFLQKP
Trigger: GGGTTTCTGGAGGAAAGATCAGCACAGGAAAAGGGG...CTCAGCAGATTGAATGCTGCCCACCAACATTGAGGGTGGATCTTCCACACCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR TCA 90 bp GCTGAGGCCCAGGGAGAACAAATAAAGAAGGCAAACTGGTCTCTCTCTCAGAGCCCCCTTTTCCTGTGCTaGTCTTTCCTCCAGAAACCC +
Preference number: 4 (lower is better)
Translates to: AEAQGEQIKKANWSLSQSPLFLC*SFLQKP
Trigger: GGGTTTCTGGAGGAAAGATCAGCACAGGAAAAGGGG...GCTCTGAGAGAGAGACCAGTTTGCCTTCTTTATTTGTTCTCCCTGGGCCTCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR TCA 90 bp AAGGGATACCTAGAGACCTGGGAGATCATTATTCTGGGCATGTCTGTGAGGTGTCACCCAAGGGTGCTCTaGCATCTGGAGCCTGAAAGC +
Preference number: 4 (lower is better)
Translates to: KGYLETWEIIILGMSVRCHPRVL*HLEPES
Trigger: GCTTTCAGGCTCCAGATGTCAGAGCACCCTTGGGTG...ACACCTCACAGACATGCCCAGAATAATGATCTCCCAGGTCTCTAGGTATCCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp AAGGGATACCTAGAGACCTGGGAGATCATTATTCTGGGCATGTCTGTGAGGTGTACTGGTGCTGTGCTCTaGCGCAGTCTTGAGGGAGGA +
Preference number: 4 (lower is better)
Translates to: KGYLETWEIIILGMSVRCTGAVL*RSLEGG
Trigger: TCCTCCCTCAAGACTGCGGCAGAGCACAGCACCAGT...ACACCTCACAGACATGCCCAGAATAATGATCTCCCAGGTCTCTAGGTATCCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321420.5
CDS-3UTR GCA 90 bp TTGACACTTCATTCTTTCAACAAGGATTTACAGAGCGGCTACTCCCTCAGGTGCCCCACAGCTCCTGCCTaGTGGGTGCTGAGCAAACTG +
Preference number: 4 (lower is better)
Translates to: LTLHSFNKDLQSGYSLRCPTAPA*WVLSKL
Trigger: CAGTTTGCTCAGCACCCAGCAGGCAGGAGCTGTGGG...GCACCTGAGGGAGTAGCCGCTCTGTAAATCCTTGTTGAAAGAATGAAGTGTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp TTGACACTTCATTCTTTCAACAAGGATTTACAGAGCGGCTACTCCCTCAGGTGCCATCCCTGGACAGTGTaGCAGTCCCTTGTGTGGCCC +
Preference number: 4 (lower is better)
Translates to: LTLHSFNKDLQSGYSLRCHPWTV*QSLVWP
Trigger: GGGCCACACAAGGGACTGGCACACTGTCCAGGGATG...GCACCTGAGGGAGTAGCCGCTCTGTAAATCCTTGTTGAAAGAATGAAGTGTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp ATCTGGACGGGCCTGGTCAGAAGCCTTGCTGCACACTTTGGAACCTGTGATGTGTGTTGTCGAAGTGGCTaGAGACTCCATAGAGGAGAA +
Preference number: 4 (lower is better)
Translates to: IWTGLVRSLAAHFGTCDVCCRSG*RLHRGE
Trigger: TTCTCCTCTATGGAGTCTGCAGCCACTTCGACAACA...CACATCACAGGTTCCAAAGTGTGCAGCAAGGCTTCTGACCAGGCCCGTCCAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp TTGACACTTCATTCTTTCAACAAGGATTTACAGAGCGGCTACTCCCTCAGGTGCATGCTACCCTCTGCATaGCTGAGTCCTGCCACCCCC +
Preference number: 4 (lower is better)
Translates to: LTLHSFNKDLQSGYSLRCMLPSA*LSPATP
Trigger: GGGGGTGGCAGGACTCAGGCATGCAGAGGGTAGCAT...GCACCTGAGGGAGTAGCCGCTCTGTAAATCCTTGTTGAAAGAATGAAGTGTCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp AGCTGGTGGGTTCAGGCAAGGATGCCTCCACATGAACATGCTACCCTCTGCATGAAAGCCTTTGTTACTTaGAGGCAGAGCCGAGGAGAA +
Preference number: 4 (lower is better)
Translates to: SWWVQARMPPHEHATLCMKAFVT*RQSRGE
Trigger: TTCTCCTCGGCTCTGCCTGCAAGTAACAAAGGCTTT...CATGCAGAGGGTAGCATGTTCATGTGGAGGCATCCTTGCCTGAACCCACCAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp GCTGAGGCCCAGGGAGAACAAATAAAGAAGGCAAACTGGTCTCTCTCTCAGAGCCAGCTACAGATCCTGTaGTGCCTTCTTCTCGAGCCA +
Preference number: 4 (lower is better)
Translates to: AEAQGEQIKKANWSLSQSQLQIL*CLLLEP
Trigger: TGGCTCGAGAAGAAGGCAGCACAGGATCTGTAGCTG...GCTCTGAGAGAGAGACCAGTTTGCCTTCTTTATTTGTTCTCCCTGGGCCTCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp GCTGAGGCCCAGGGAGAACAAATAAAGAAGGCAAACTGGTCTCTCTCTCAGAGCGCTGCGCCCCTTTGTTaGGGCATCTGTCGTATTCTT +
Preference number: 4 (lower is better)
Translates to: AEAQGEQIKKANWSLSQSAAPLC*GICRIL
Trigger: AAGAATACGACAGATGCCCCAACAAAGGGGCGCAGC...GCTCTGAGAGAGAGACCAGTTTGCCTTCTTTATTTGTTCTCCCTGGGCCTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp AGCTGGTGGGTTCAGGCAAGGATGCCTCCACATGAACATGCTACCCTCTGCATGGTCCTCCTCAAGTCCTaGCGAGAAGGAATCATAGTA +
Preference number: 4 (lower is better)
Translates to: SWWVQARMPPHEHATLCMVLLKS*REGIIV
Trigger: TACTATGATTCCTTCTCGCCAGGACTTGAGGAGGAC...CATGCAGAGGGTAGCATGTTCATGTGGAGGCATCCTTGCCTGAACCCACCAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp TTGACACTTCATTCTTTCAACAAGGATTTACAGAGCGGCTACTCCCTCAGGTGCCAAGAGGACCCTCGCTaGGGTCGTGGAAGAGCTCGT +
Preference number: 4 (lower is better)
Translates to: LTLHSFNKDLQSGYSLRCQEDPR*GRGRAR
Trigger: ACGAGCTCTTCCACGACCCCAGCGAGGGTCCTCTTG...GCACCTGAGGGAGTAGCCGCTCTGTAAATCCTTGTTGAAAGAATGAAGTGTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp GACAGCGTGGAGGGAGTGGAGTCAAAAGCCTTTGTTACTTGCAGGCAGAGCCGATGGGATTGCGTCTTTTaGGATTCACACACATCCCAG +
Preference number: 4 (lower is better)
Translates to: DSVEGVESKAFVTCRQSRWDCVF*DSHTSQ
Trigger: CTGGGATGTGTGTGAATCCCAAAAGACGCAATCCCA...TCGGCTCTGCCTGCAAGTAACAAAGGCTTTTGACTCCACTCCCTCCACGCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp CCTCAGCTACAGATCCTGTGCTGCCTTCTTCTCGAGCCAGGACAGCACAACTCATGGGATTGCGTCTTTTaGGATTCACACACATCCCAG +
Preference number: 4 (lower is better)
Translates to: PQLQILCCLLLEPGQHNSWDCVF*DSHTSQ
Trigger: CTGGGATGTGTGTGAATCCCAAAAGACGCAATCCCA...TGAGTTGTGCTGTCCTGGCTCGAGAAGAAGGCAGCACAGGATCTGTAGCTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp CTTCGCGCTGTCTTTGGCGGTGGGCTGCCTGAGCTGGTGGGTTCAGGCAAGGATTTTTATTGTGTGAAGTaGCTGATGTGTTCTGTTGTG +
Preference number: 4 (lower is better)
Translates to: LRAVFGGGLPELVGSGKDFYCVK*LMCSVV
Trigger: CACAACAGAACACATCAGCCACTTCACACAATAAAA...ATCCTTGCCTGAACCCACCAGCTCAGGCAGCCCACCGCCAAAGACAGCGCGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp TCCTGTGCTGCCTTCTTCTCGAGCCAGGACAGCACAACTCACGCTCCTCTTGGTCAAGTTGACAAGGGGTaGACCTGTGGACTTCATTTT +
Preference number: 4 (lower is better)
Translates to: SCAAFFSSQDSTTHAPLGQVDKG*TCGLHF
Trigger: AAAATGAAGTCCACAGGTCCACCCCTTGTCAACTTG...ACCAAGAGGAGCGTGAGTTGTGCTGTCCTGGCTCGAGAAGAAGGCAGCACAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp TTGACACTTCATTCTTTCAACAAGGATTTACAGAGCGGCTACTCCCTCAGGTGCTTGAGGCCGGTTCAGTaGGCCCTCCTAAGGTCGGCT +
Preference number: 4 (lower is better)
Translates to: LTLHSFNKDLQSGYSLRCLRPVQ*ALLRSA
Trigger: AGCCGACCTTAGGAGGGCCCACTGAACCGGCCTCAA...GCACCTGAGGGAGTAGCCGCTCTGTAAATCCTTGTTGAAAGAATGAAGTGTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp ATCTGGACGGGCCTGGTCAGAAGCCTTGCTGCACACTTTGGAACCTGTGATGTGTTAGCTGAGGCAACATaGCGAAAACCCGTCTCTACA +
Preference number: 4 (lower is better)
Translates to: IWTGLVRSLAAHFGTCDVLAEAT*RKPVST
Trigger: TGTAGAGACGGGTTTTCGCCATGTTGCCTCAGCTAA...CACATCACAGGTTCCAAAGTGTGCAGCAAGGCTTCTGACCAGGCCCGTCCAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp GACAGCGTGGAGGGAGTGGAGTCAAAAGCCTTTGTTACTTGCAGGCAGAGCCGATTAGCTGAGGCAACATaGCGAAAACCCGTCTCTACA +
Preference number: 4 (lower is better)
Translates to: DSVEGVESKAFVTCRQSRLAEAT*RKPVST
Trigger: TGTAGAGACGGGTTTTCGCCATGTTGCCTCAGCTAA...TCGGCTCTGCCTGCAAGTAACAAAGGCTTTTGACTCCACTCCCTCCACGCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp TGCCAAGTTGACAAGGGGTGGACCTGTGGACTTCATTTTGGGTGTGAACTCGACATGCATGATGCTGGCTaGCTCACTCCTGTCATCCAG +
Preference number: 4 (lower is better)
Translates to: CQVDKGWTCGLHFGCELDMHDAG*LTPVIQ
Trigger: CTGGATGACAGGAGTGAGCCAGCCAGCATCATGCAT...GTCGAGTTCACACCCAAAATGAAGTCCACAGGTCCACCCCTTGTCAACTTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp AGCTGGTGGGTTCAGGCAAGGATGCCTCCACATGAACATGCTACCCTCTGCATGACAGCGTGGAGGGAGTaGAGTCAAAAGCCTTTGTTA +
Preference number: 4 (lower is better)
Translates to: SWWVQARMPPHEHATLCMTAWRE*SQKPLL
Trigger: TAACAAAGGCTTTTGACTCCACTCCCTCCACGCTGT...CATGCAGAGGGTAGCATGTTCATGTGGAGGCATCCTTGCCTGAACCCACCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp CCTCAGCTACAGATCCTGTGCTGCCTTCTTCTCGAGCCAGGACAGCACAACTCAACAGCGTGGAGGGAGTaGAGTCAAAAGCCTTTGTTA +
Preference number: 4 (lower is better)
Translates to: PQLQILCCLLLEPGQHNSTAWRE*SQKPLL
Trigger: TAACAAAGGCTTTTGACTCCACTCCCTCCACGCTGT...TGAGTTGTGCTGTCCTGGCTCGAGAAGAAGGCAGCACAGGATCTGTAGCTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp GACAGCGTGGAGGGAGTGGAGTCAAAAGCCTTTGTTACTTGCAGGCAGAGCCGAGAGCTCTGCATGAGATaGGATTTCCCTAGCACTTTG +
Preference number: 4 (lower is better)
Translates to: DSVEGVESKAFVTCRQSRELCMR*DFPSTL
Trigger: CAAAGTGCTAGGGAAATCCCATCTCATGCAGAGCTC...TCGGCTCTGCCTGCAAGTAACAAAGGCTTTTGACTCCACTCCCTCCACGCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp TGCCAAGTTGACAAGGGGTGGACCTGTGGACTTCATTTTGGGTGTGAACTCGACCTCAGTGAGAGGTTCTaGAGCTTGAGGAAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: CQVDKGWTCGLHFGCELDLSERF*SLRKSR
Trigger: CCTGCTCTTCCTCAAGCTCCAGAACCTCTCACTGAG...GTCGAGTTCACACCCAAAATGAAGTCCACAGGTCCACCCCTTGTCAACTTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp CTAGGTGTGGAAGATCCACCCTCAATGTTGGTGGGCAGCATTCAATCTGCTGAGCTCAGTGAGAGGTTCTaGAGCTTGAGGAAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: LGVEDPPSMLVGSIQSAELSERF*SLRKSR
Trigger: CCTGCTCTTCCTCAAGCTCCAGAACCTCTCACTGAG...CTCAGCAGATTGAATGCTGCCCACCAACATTGAGGGTGGATCTTCCACACCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR TCA 90 bp TTGACACTTCATTCTTTCAACAAGGATTTACAGAGCGGCTACTCCCTCAGGTGCCTGCTGCTGACGCACTaGGCGATTCACACTGTCCCA +
Preference number: 4 (lower is better)
Translates to: LTLHSFNKDLQSGYSLRCLLLTH*AIHTVP
Trigger: TGGGACAGTGTGAATCGCTCAGTGCGTCAGCAGCAG...GCACCTGAGGGAGTAGCCGCTCTGTAAATCCTTGTTGAAAGAATGAAGTGTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR TCA 90 bp AAGGGATACCTAGAGACCTGGGAGATCATTATTCTGGGCATGTCTGTGAGGTGTGCTGTTCGTTTGAGCTaGTCTTCAGGGCTGCCACAC +
Preference number: 4 (lower is better)
Translates to: KGYLETWEIIILGMSVRCAVRLS*SSGLPH
Trigger: GTGTGGCAGCCCTGAAGATCAGCTCAAACGAACAGC...ACACCTCACAGACATGCCCAGAATAATGATCTCCCAGGTCTCTAGGTATCCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR TCA 90 bp ATCTGGACGGGCCTGGTCAGAAGCCTTGCTGCACACTTTGGAACCTGTGATGTGTTGAGACATTTTAGCTaGGGCAACATGGCGAAAACC +
Preference number: 4 (lower is better)
Translates to: IWTGLVRSLAAHFGTCDVLRHFS*GNMAKT
Trigger: GGTTTTCGCCATGTTGCCTCAGCTAAAATGTCTCAA...CACATCACAGGTTCCAAAGTGTGCAGCAAGGCTTCTGACCAGGCCCGTCCAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR TCA 90 bp AAGGGATACCTAGAGACCTGGGAGATCATTATTCTGGGCATGTCTGTGAGGTGTCTCCCTTCATGGTTCTaGATGTCGGGGTGCTGCACA +
Preference number: 4 (lower is better)
Translates to: KGYLETWEIIILGMSVRCLPSWF*MSGCCT
Trigger: TGTGCAGCACCCCGACATTCAGAACCATGAAGGGAG...ACACCTCACAGACATGCCCAGAATAATGATCTCCCAGGTCTCTAGGTATCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR TCA 90 bp AAGGGATACCTAGAGACCTGGGAGATCATTATTCTGGGCATGTCTGTGAGGTGTACTTTGCCTGCGACCTaGCTGACCCCTTTTCCTGTG +
Preference number: 4 (lower is better)
Translates to: KGYLETWEIIILGMSVRCTLPAT*LTPFPV
Trigger: CACAGGAAAAGGGGTCAGTCAGGTCGCAGGCAAAGT...ACACCTCACAGACATGCCCAGAATAATGATCTCCCAGGTCTCTAGGTATCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR TCA 90 bp TTGACACTTCATTCTTTCAACAAGGATTTACAGAGCGGCTACTCCCTCAGGTGCGGTAAGCGAATCTGGTaGAACTTGCCCCCAGCTCGG +
Preference number: 4 (lower is better)
Translates to: LTLHSFNKDLQSGYSLRCGKRIW*NLPPAR
Trigger: CCGAGCTGGGGGCAAGTTTCACCAGATTCGCTTACC...GCACCTGAGGGAGTAGCCGCTCTGTAAATCCTTGTTGAAAGAATGAAGTGTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp TTGACACTTCATTCTTTCAACAAGGATTTACAGAGCGGCTACTCCCTCAGGTGCCTCTCTTCAGCTCCATaGTGCCAGTGCCCCAGCTGT +
Preference number: 4 (lower is better)
Translates to: LTLHSFNKDLQSGYSLRCLSSAP*CQCPSC
Trigger: ACAGCTGGGGCACTGGCAGCATGGAGCTGAAGAGAG...GCACCTGAGGGAGTAGCCGCTCTGTAAATCCTTGTTGAAAGAATGAAGTGTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321420.5
CDS-3UTR GCA 90 bp TTGACACTTCATTCTTTCAACAAGGATTTACAGAGCGGCTACTCCCTCAGGTGCACCTCTGGTCCTGTGTaGTGGCTGAGTAGGGTAGGC +
Preference number: 4 (lower is better)
Translates to: LTLHSFNKDLQSGYSLRCTSGPV*WLSRVG
Trigger: GCCTACCCTACTCAGCCAGCACACAGGACCAGAGGT...GCACCTGAGGGAGTAGCCGCTCTGTAAATCCTTGTTGAAAGAATGAAGTGTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp CTAGGTGTGGAAGATCCACCCTCAATGTTGGTGGGCAGCATTCAATCTGCTGAGGGGTTCAGGCAAGGATaGCTCCACATGAACATGCTA +
Preference number: 4 (lower is better)
Translates to: LGVEDPPSMLVGSIQSAEGFRQG*LHMNML
Trigger: TAGCATGTTCATGTGGAGGCATCCTTGCCTGAACCC...CTCAGCAGATTGAATGCTGCCCACCAACATTGAGGGTGGATCTTCCACACCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp AGCTGGTGGGTTCAGGCAAGGATGCCTCCACATGAACATGCTACCCTCTGCATGGACTCATTGGCTCTCTaGTTCCCATTTACAATGTGC +
Preference number: 4 (lower is better)
Translates to: SWWVQARMPPHEHATLCMDSLAL*FPFTMC
Trigger: GCACATTGTAAATGGGAAGCAGAGAGCCAATGAGTC...CATGCAGAGGGTAGCATGTTCATGTGGAGGCATCCTTGCCTGAACCCACCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp GACAGCGTGGAGGGAGTGGAGTCAAAAGCCTTTGTTACTTGCAGGCAGAGCCGAGACTCATTGGCTCTCTaGTTCCCATTTACAATGTGC +
Preference number: 4 (lower is better)
Translates to: DSVEGVESKAFVTCRQSRDSLAL*FPFTMC
Trigger: GCACATTGTAAATGGGAAGCAGAGAGCCAATGAGTC...TCGGCTCTGCCTGCAAGTAACAAAGGCTTTTGACTCCACTCCCTCCACGCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp TGCCAAGTTGACAAGGGGTGGACCTGTGGACTTCATTTTGGGTGTGAACTCGACGTGGAGCTACTGCCTTaGTTGGGGCTTTATTTGGAG +
Preference number: 4 (lower is better)
Translates to: CQVDKGWTCGLHFGCELDVELLP*LGLYLE
Trigger: CTCCAAATAAAGCCCCAAGCAAGGCAGTAGCTCCAC...GTCGAGTTCACACCCAAAATGAAGTCCACAGGTCCACCCCTTGTCAACTTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp CTTGGGACTATGGCATTTGGGATTGCGTCTTTTGGGATTCACACACATCCCAGGTTGGAACCTGTGATGTaGAGCCTGTGTCCTGCTTGC +
Preference number: 4 (lower is better)
Translates to: LGTMAFGIASFGIHTHPRLEPVM*SLCPAC
Trigger: GCAAGCAGGACACAGGCTGCACATCACAGGTTCCAA...CCTGGGATGTGTGTGAATCCCAAAAGACGCAATCCCAAATGCCATAGTCCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp AAGGGATACCTAGAGACCTGGGAGATCATTATTCTGGGCATGTCTGTGAGGTGTGTTCAGCTCCAGAGATaGCACCGAGCTCTCATCTGC +
Preference number: 4 (lower is better)
Translates to: KGYLETWEIIILGMSVRCVQLQR*HRALIC
Trigger: GCAGATGAGAGCTCGGTGCCATCTCTGGAGCTGAAC...ACACCTCACAGACATGCCCAGAATAATGATCTCCCAGGTCTCTAGGTATCCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp TTGACACTTCATTCTTTCAACAAGGATTTACAGAGCGGCTACTCCCTCAGGTGCAGCCAGCTCAGGTCCTaGACACGATCTCGACACCTC +
Preference number: 4 (lower is better)
Translates to: LTLHSFNKDLQSGYSLRCSQLRS*TRSRHL
Trigger: GAGGTGTCGAGATCGTGTCCAGGACCTGAGCTGGCT...GCACCTGAGGGAGTAGCCGCTCTGTAAATCCTTGTTGAAAGAATGAAGTGTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp GCTGAGGCCCAGGGAGAACAAATAAAGAAGGCAAACTGGTCTCTCTCTCAGAGCTCTCTCTCTCAGAGCTaGGACAGGCTTTTCTTCCAC +
Preference number: 4 (lower is better)
Translates to: AEAQGEQIKKANWSLSQSSLSQS*DRLFFH
Trigger: GTGGAAGAAAAGCCTGTCCCAGCTCTGAGAGAGAGA...GCTCTGAGAGAGAGACCAGTTTGCCTTCTTTATTTGTTCTCCCTGGGCCTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp AAGGGATACCTAGAGACCTGGGAGATCATTATTCTGGGCATGTCTGTGAGGTGTGGCGATCTGACAGCGTaGAGGGAGTGGAGTCAAAAG +
Preference number: 4 (lower is better)
Translates to: KGYLETWEIIILGMSVRCGDLTA*REWSQK
Trigger: CTTTTGACTCCACTCCCTCCACGCTGTCAGATCGCC...ACACCTCACAGACATGCCCAGAATAATGATCTCCCAGGTCTCTAGGTATCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR TCA 90 bp CTTGGGACTATGGCATTTGGGATTGCGTCTTTTGGGATTCACACACATCCCAGGTGTCCCAGAACCTGGTaGAGTCAGAGGCTTCATTCT +
Preference number: 4 (lower is better)
Translates to: LGTMAFGIASFGIHTHPRCPRTW*SQRLHS
Trigger: AGAATGAAGCCTCTGACTTCACCAGGTTCTGGGACA...CCTGGGATGTGTGTGAATCCCAAAAGACGCAATCCCAAATGCCATAGTCCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR TCA 90 bp CTTGGGACTATGGCATTTGGGATTGCGTCTTTTGGGATTCACACACATCCCAGGAACAAGCCTTCAGAGTaGCCTCGTGTCTCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: LGTMAFGIASFGIHTHPRNKPSE*PRVSSS
Trigger: AGAGGAAGAGACACGAGGTCACTCTGAAGGCTTGTT...CCTGGGATGTGTGTGAATCCCAAAAGACGCAATCCCAAATGCCATAGTCCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR TCA 90 bp ATCTGGACGGGCCTGGTCAGAAGCCTTGCTGCACACTTTGGAACCTGTGATGTGCAAAAGATAGAGATTTaGGTCCTAGGCTCTCCTGAA +
Preference number: 4 (lower is better)
Translates to: IWTGLVRSLAAHFGTCDVQKIEI*VLGSPE
Trigger: TTCAGGAGAGCCTAGGACTCAAATCTCTATCTTTTG...CACATCACAGGTTCCAAAGTGTGCAGCAAGGCTTCTGACCAGGCCCGTCCAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR TCA 90 bp AAGGGATACCTAGAGACCTGGGAGATCATTATTCTGGGCATGTCTGTGAGGTGTATCCTGGCATCTTGCTaGGGTGTGCTGGTTGAGGTA +
Preference number: 4 (lower is better)
Translates to: KGYLETWEIIILGMSVRCILASC*GVLVEV
Trigger: TACCTCAACCAGCACACCTCAGCAAGATGCCAGGAT...ACACCTCACAGACATGCCCAGAATAATGATCTCCCAGGTCTCTAGGTATCCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp TTGACACTTCATTCTTTCAACAAGGATTTACAGAGCGGCTACTCCCTCAGGTGCAGGGAGGAGCAGAAATaGTGTGGGGACTCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: LTLHSFNKDLQSGYSLRCREEQK*CGDSVS
Trigger: GGAGACAGAGTCCCCACAGCATTTCTGCTCCTCCCT...GCACCTGAGGGAGTAGCCGCTCTGTAAATCCTTGTTGAAAGAATGAAGTGTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321420.5
CDS-3UTR GCA 90 bp TTGACACTTCATTCTTTCAACAAGGATTTACAGAGCGGCTACTCCCTCAGGTGCGAGCAGCTAGGTGGTTaGAGCTTCGCGCTGTCTTTG +
Preference number: 4 (lower is better)
Translates to: LTLHSFNKDLQSGYSLRCEQLGG*SFALSL
Trigger: CAAAGACAGCGCGAAGCTGCAACCACCTAGCTGCTC...GCACCTGAGGGAGTAGCCGCTCTGTAAATCCTTGTTGAAAGAATGAAGTGTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp ATCTGGACGGGCCTGGTCAGAAGCCTTGCTGCACACTTTGGAACCTGTGATGTGTATGGCATTTGGGATTaGGTCTTTTGGGATTCACAC +
Preference number: 4 (lower is better)
Translates to: IWTGLVRSLAAHFGTCDVYGIWD*VFWDSH
Trigger: GTGTGAATCCCAAAAGACGCAATCCCAAATGCCATA...CACATCACAGGTTCCAAAGTGTGCAGCAAGGCTTCTGACCAGGCCCGTCCAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp GCTGAGGCCCAGGGAGAACAAATAAAGAAGGCAAACTGGTCTCTCTCTCAGAGCAGAGATGAAAGTTCTTaGCATCTCCGCTCTTTGGGC +
Preference number: 4 (lower is better)
Translates to: AEAQGEQIKKANWSLSQSRDESS*HLRSLG
Trigger: GCCCAAAGAGCGGAGATGGCAAGAACTTTCATCTCT...GCTCTGAGAGAGAGACCAGTTTGCCTTCTTTATTTGTTCTCCCTGGGCCTCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp AGCTGGTGGGTTCAGGCAAGGATGCCTCCACATGAACATGCTACCCTCTGCATGCCATGCCTCTACACCTaGAGAATTACAAGCCAAATA +
Preference number: 4 (lower is better)
Translates to: SWWVQARMPPHEHATLCMPCLYT*RITSQI
Trigger: TATTTGGCTTGTAATTCTGCAGGTGTAGAGGCATGG...CATGCAGAGGGTAGCATGTTCATGTGGAGGCATCCTTGCCTGAACCCACCAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp GACAGCGTGGAGGGAGTGGAGTCAAAAGCCTTTGTTACTTGCAGGCAGAGCCGACCATGCCTCTACACCTaGAGAATTACAAGCCAAATA +
Preference number: 4 (lower is better)
Translates to: DSVEGVESKAFVTCRQSRPCLYT*RITSQI
Trigger: TATTTGGCTTGTAATTCTGCAGGTGTAGAGGCATGG...TCGGCTCTGCCTGCAAGTAACAAAGGCTTTTGACTCCACTCCCTCCACGCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp TGCCAAGTTGACAAGGGGTGGACCTGTGGACTTCATTTTGGGTGTGAACTCGACAAAGCCTTTGTTACTTaGAGGCAGAGCCGAGGAGAA +
Preference number: 4 (lower is better)
Translates to: CQVDKGWTCGLHFGCELDKAFVT*RQSRGE
Trigger: TTCTCCTCGGCTCTGCCTGCAAGTAACAAAGGCTTT...GTCGAGTTCACACCCAAAATGAAGTCCACAGGTCCACCCCTTGTCAACTTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp AAGGGATACCTAGAGACCTGGGAGATCATTATTCTGGGCATGTCTGTGAGGTGTAACCCATTTCATGGCTaGCTGTGGAGCCCAATCCTG +
Preference number: 4 (lower is better)
Translates to: KGYLETWEIIILGMSVRCNPFHG*LWSPIL
Trigger: CAGGATTGGGCTCCACAGGCAGCCATGAAATGGGTT...ACACCTCACAGACATGCCCAGAATAATGATCTCCCAGGTCTCTAGGTATCCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp AAGGGATACCTAGAGACCTGGGAGATCATTATTCTGGGCATGTCTGTGAGGTGTTTGGAACCTGTGATGTaGAGCCTGTGTCCTGCTTGC +
Preference number: 4 (lower is better)
Translates to: KGYLETWEIIILGMSVRCLEPVM*SLCPAC
Trigger: GCAAGCAGGACACAGGCTGCACATCACAGGTTCCAA...ACACCTCACAGACATGCCCAGAATAATGATCTCCCAGGTCTCTAGGTATCCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp CCAGCCACCTTCTCCCTTCATGGTTCTGAATGTCGGGGTGCTGCACATGTGTTGTTGTTTCTCCGAATGTaGAATAGGTTCCGAAAGCAC +
Preference number: 4 (lower is better)
Translates to: PATFSLHGSECRGAAHVLLFLRM*NRFRKH
Trigger: GTGCTTTCGGAACCTATTCCACATTCGGAGAAACAA...CAACACATGTGCAGCACCCCGACATTCAGAACCATGAAGGGAGAAGGTGGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp TTGACACTTCATTCTTTCAACAAGGATTTACAGAGCGGCTACTCCCTCAGGTGCGTTCAGCTCCAGAGATaGCACCGAGCTCTCATCTGC +
Preference number: 4 (lower is better)
Translates to: LTLHSFNKDLQSGYSLRCVQLQR*HRALIC
Trigger: GCAGATGAGAGCTCGGTGCCATCTCTGGAGCTGAAC...GCACCTGAGGGAGTAGCCGCTCTGTAAATCCTTGTTGAAAGAATGAAGTGTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp TTGACACTTCATTCTTTCAACAAGGATTTACAGAGCGGCTACTCCCTCAGGTGCTCTGGTCCTGTGTGCTaGCTGAGTAGGGTAGGCCAT +
Preference number: 4 (lower is better)
Translates to: LTLHSFNKDLQSGYSLRCSGPVC*LSRVGH
Trigger: ATGGCCTACCCTACTCAGCCAGCACACAGGACCAGA...GCACCTGAGGGAGTAGCCGCTCTGTAAATCCTTGTTGAAAGAATGAAGTGTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp TGCCAAGTTGACAAGGGGTGGACCTGTGGACTTCATTTTGGGTGTGAACTCGACGGATACCTAGAGACCTaGGAGATCATTATTCTGGGC +
Preference number: 4 (lower is better)
Translates to: CQVDKGWTCGLHFGCELDGYLET*EIIILG
Trigger: GCCCAGAATAATGATCTCCCAGGTCTCTAGGTATCC...GTCGAGTTCACACCCAAAATGAAGTCCACAGGTCCACCCCTTGTCAACTTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR CAA 72 bp CCTTTGTTACTTGCAGGCAGAGCCGAGGAGAATCCATaGGCTTCTTCCCAAAAAGCATTTGGCCATCCATGG +
Preference number: 4 (lower is better)
Translates to: PLLLAGRAEENP*ASSQKAFGHPW
Trigger: CCATGGATGGCCAAATGCTTTTTGGGAAGAAGCCAATGGATTCTCCTCGGCTCTGCCTGCAAGTAACAAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR TCA 90 bp AAGGGATACCTAGAGACCTGGGAGATCATTATTCTGGGCATGTCTGTGAGGTGTTGTCCCAGAACCTGGTaGAGTCAGAGGCTTCATTCT +
Preference number: 4 (lower is better)
Translates to: KGYLETWEIIILGMSVRCCPRTW*SQRLHS
Trigger: AGAATGAAGCCTCTGACTTCACCAGGTTCTGGGACA...ACACCTCACAGACATGCCCAGAATAATGATCTCCCAGGTCTCTAGGTATCCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR TCA 90 bp TTGACACTTCATTCTTTCAACAAGGATTTACAGAGCGGCTACTCCCTCAGGTGCATCCTGGCATCTTGCTaGGGTGTGCTGGTTGAGGTA +
Preference number: 4 (lower is better)
Translates to: LTLHSFNKDLQSGYSLRCILASC*GVLVEV
Trigger: TACCTCAACCAGCACACCTCAGCAAGATGCCAGGAT...GCACCTGAGGGAGTAGCCGCTCTGTAAATCCTTGTTGAAAGAATGAAGTGTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR TCA 90 bp TTGACACTTCATTCTTTCAACAAGGATTTACAGAGCGGCTACTCCCTCAGGTGCCTCCGTGTCCAGGTCTaGAAAATGGGGCTGACAACT +
Preference number: 4 (lower is better)
Translates to: LTLHSFNKDLQSGYSLRCLRVQV*KMGLTT
Trigger: AGTTGTCAGCCCCATTTTTCAGACCTGGACACGGAG...GCACCTGAGGGAGTAGCCGCTCTGTAAATCCTTGTTGAAAGAATGAAGTGTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp GCTGAGGCCCAGGGAGAACAAATAAAGAAGGCAAACTGGTCTCTCTCTCAGAGCAGGCTTTTCTTCCACTaGCTTGACATCAGAGCTTCA +
Preference number: 4 (lower is better)
Translates to: AEAQGEQIKKANWSLSQSRLFFH*LDIRAS
Trigger: TGAAGCTCTGATGTCAAGGCAGTGGAAGAAAAGCCT...GCTCTGAGAGAGAGACCAGTTTGCCTTCTTTATTTGTTCTCCCTGGGCCTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp GCTGAGGCCCAGGGAGAACAAATAAAGAAGGCAAACTGGTCTCTCTCTCAGAGCGCTCTAGTTAGAGAGTaGAAGCGGAGGGAAATCATT +
Preference number: 4 (lower is better)
Translates to: AEAQGEQIKKANWSLSQSALVRE*KRREII
Trigger: AATGATTTCCCTCCGCTTGCACTCTCTAACTAGAGC...GCTCTGAGAGAGAGACCAGTTTGCCTTCTTTATTTGTTCTCCCTGGGCCTCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp TTGACACTTCATTCTTTCAACAAGGATTTACAGAGCGGCTACTCCCTCAGGTGCCCTGGTCAGAAGCCTTaGTGCACACTTTGGAACCTG +
Preference number: 4 (lower is better)
Translates to: LTLHSFNKDLQSGYSLRCPGQKP*CTLWNL
Trigger: CAGGTTCCAAAGTGTGCAGCAAGGCTTCTGACCAGG...GCACCTGAGGGAGTAGCCGCTCTGTAAATCCTTGTTGAAAGAATGAAGTGTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp GCTGAGGCCCAGGGAGAACAAATAAAGAAGGCAAACTGGTCTCTCTCTCAGAGCATAAAGAAGGCAAACTaGTCTCTCTCTCAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: AEAQGEQIKKANWSLSQSIKKAN*SLSQSW
Trigger: CCAGCTCTGAGAGAGAGACCAGTTTGCCTTCTTTAT...GCTCTGAGAGAGAGACCAGTTTGCCTTCTTTATTTGTTCTCCCTGGGCCTCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp CTTGGGACTATGGCATTTGGGATTGCGTCTTTTGGGATTCACACACATCCCAGGTGTCATCCAGCACTGTaGGAGGCTGAGATTTTGAGA +
Preference number: 4 (lower is better)
Translates to: LGTMAFGIASFGIHTHPRCHPAL*EAEILR
Trigger: TCTCAAAATCTCAGCCTCCCACAGTGCTGGATGACA...CCTGGGATGTGTGTGAATCCCAAAAGACGCAATCCCAAATGCCATAGTCCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp TGCCAAGTTGACAAGGGGTGGACCTGTGGACTTCATTTTGGGTGTGAACTCGACCCGAGGAGAATCCATTaGCTTCTTCCCAAAAAGCAT +
Preference number: 4 (lower is better)
Translates to: CQVDKGWTCGLHFGCELDPRRIH*LLPKKH
Trigger: ATGCTTTTTGGGAAGAAGCCAATGGATTCTCCTCGG...GTCGAGTTCACACCCAAAATGAAGTCCACAGGTCCACCCCTTGTCAACTTGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp TTGACACTTCATTCTTTCAACAAGGATTTACAGAGCGGCTACTCCCTCAGGTGCTTTCCTGAAGGGGAATaGCGATCTGACAGCGTGGAG +
Preference number: 4 (lower is better)
Translates to: LTLHSFNKDLQSGYSLRCFPEGE*RSDSVE
Trigger: CTCCACGCTGTCAGATCGCCATTCCCCTTCAGGAAA...GCACCTGAGGGAGTAGCCGCTCTGTAAATCCTTGTTGAAAGAATGAAGTGTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp AAGGGATACCTAGAGACCTGGGAGATCATTATTCTGGGCATGTCTGTGAGGTGTTGTGTTGTGACATTTTaGGGAGTGAGGTCCACAGCC +
Preference number: 4 (lower is better)
Translates to: KGYLETWEIIILGMSVRCCVVTF*GVRSTA
Trigger: GGCTGTGGACCTCACTCCCCAAAATGTCACAACACA...ACACCTCACAGACATGCCCAGAATAATGATCTCCCAGGTCTCTAGGTATCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
3UTR CAA 72 bp GTCTTTTGGGATTCACACACATCCCAGGCAGACTCATaGGCTCTCTGCTTCCCATTTACAATGTGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: VFWDSHTSQADS*ALCFPFTMCSS
Trigger: AGAGCTGCACATTGTAAATGGGAAGCAGAGAGCCAATGAGTCTGCCTGGGATGTGTGTGAATCCCAAAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR TCA 90 bp TGCCAAGTTGACAAGGGGTGGACCTGTGGACTTCATTTTGGGTGTGAACTCGACCAAAAGATAGAGATTTaGGTCCTAGGCTCTCCTGAA +
Preference number: 4 (lower is better)
Translates to: CQVDKGWTCGLHFGCELDQKIEI*VLGSPE
Trigger: TTCAGGAGAGCCTAGGACTCAAATCTCTATCTTTTG...GTCGAGTTCACACCCAAAATGAAGTCCACAGGTCCACCCCTTGTCAACTTGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR TCA 90 bp TTGACACTTCATTCTTTCAACAAGGATTTACAGAGCGGCTACTCCCTCAGGTGCAAGGATGCCTCCACATaGACATGCTACCCTCTGCAT +
Preference number: 4 (lower is better)
Translates to: LTLHSFNKDLQSGYSLRCKDAST*TCYPLH
Trigger: ATGCAGAGGGTAGCATGTTCATGTGGAGGCATCCTT...GCACCTGAGGGAGTAGCCGCTCTGTAAATCCTTGTTGAAAGAATGAAGTGTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR TCA 90 bp TGCCAAGTTGACAAGGGGTGGACCTGTGGACTTCATTTTGGGTGTGAACTCGACACTGGTCCCCAACATTaGAATACTGAAAGACGCAAA +
Preference number: 4 (lower is better)
Translates to: CQVDKGWTCGLHFGCELDTGPQH*NTERRK
Trigger: TTTGCGTCTTTCAGTATTTCAATGTTGGGGACCAGT...GTCGAGTTCACACCCAAAATGAAGTCCACAGGTCCACCCCTTGTCAACTTGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp GCTGAGGCCCAGGGAGAACAAATAAAGAAGGCAAACTGGTCTCTCTCTCAGAGCTTCCCAAAAAGCATTTaGCCATCCATGGCTCTAGTT +
Preference number: 4 (lower is better)
Translates to: AEAQGEQIKKANWSLSQSFPKSI*PSMALV
Trigger: AACTAGAGCCATGGATGGCCAAATGCTTTTTGGGAA...GCTCTGAGAGAGAGACCAGTTTGCCTTCTTTATTTGTTCTCCCTGGGCCTCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp TTGACACTTCATTCTTTCAACAAGGATTTACAGAGCGGCTACTCCCTCAGGTGCAGAGATGAAAGTTCTTaGCATCTCCGCTCTTTGGGC +
Preference number: 4 (lower is better)
Translates to: LTLHSFNKDLQSGYSLRCRDESS*HLRSLG
Trigger: GCCCAAAGAGCGGAGATGGCAAGAACTTTCATCTCT...GCACCTGAGGGAGTAGCCGCTCTGTAAATCCTTGTTGAAAGAATGAAGTGTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp AGCTGGTGGGTTCAGGCAAGGATGCCTCCACATGAACATGCTACCCTCTGCATGGTCCTCACACAAGTTTaGATCATTATTCTAAAAGAC +
Preference number: 4 (lower is better)
Translates to: SWWVQARMPPHEHATLCMVLTQV*IIILKD
Trigger: GTCTTTTAGAATAATGATCCAAACTTGTGTGAGGAC...CATGCAGAGGGTAGCATGTTCATGTGGAGGCATCCTTGCCTGAACCCACCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp TTGACACTTCATTCTTTCAACAAGGATTTACAGAGCGGCTACTCCCTCAGGTGCTGTCATCCAGCACTGTaGGAGGCTGAGATTTTGAGA +
Preference number: 4 (lower is better)
Translates to: LTLHSFNKDLQSGYSLRCCHPAL*EAEILR
Trigger: TCTCAAAATCTCAGCCTCCCACAGTGCTGGATGACA...GCACCTGAGGGAGTAGCCGCTCTGTAAATCCTTGTTGAAAGAATGAAGTGTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp AAGGGATACCTAGAGACCTGGGAGATCATTATTCTGGGCATGTCTGTGAGGTGTCCGAGGAGAATCCATTaGCTTCTTCCCAAAAAGCAT +
Preference number: 4 (lower is better)
Translates to: KGYLETWEIIILGMSVRCPRRIH*LLPKKH
Trigger: ATGCTTTTTGGGAAGAAGCCAATGGATTCTCCTCGG...ACACCTCACAGACATGCCCAGAATAATGATCTCCCAGGTCTCTAGGTATCCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR TCA 90 bp TTGACACTTCATTCTTTCAACAAGGATTTACAGAGCGGCTACTCCCTCAGGTGCGGGAGGCTGAGATTTTaGGACATTTTAGTTGAGGAG +
Preference number: 4 (lower is better)
Translates to: LTLHSFNKDLQSGYSLRCGRLRF*DILVEE
Trigger: CTCCTCAACTAAAATGTCTCAAAATCTCAGCCTCCC...GCACCTGAGGGAGTAGCCGCTCTGTAAATCCTTGTTGAAAGAATGAAGTGTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp CTAGGTGTGGAAGATCCACCCTCAATGTTGGTGGGCAGCATTCAATCTGCTGAGCCAAGCATAGTGACATaGATGTATACATTTCCCATT +
Preference number: 4 (lower is better)
Translates to: LGVEDPPSMLVGSIQSAEPSIVT*MYTFPI
Trigger: AATGGGAAATGTATACATGCATGTCACTATGCTTGG...CTCAGCAGATTGAATGCTGCCCACCAACATTGAGGGTGGATCTTCCACACCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp TTGACACTTCATTCTTTCAACAAGGATTTACAGAGCGGCTACTCCCTCAGGTGCATAAAGAAGGCAAACTaGTCTCTCTCTCAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: LTLHSFNKDLQSGYSLRCIKKAN*SLSQSW
Trigger: CCAGCTCTGAGAGAGAGACCAGTTTGCCTTCTTTAT...GCACCTGAGGGAGTAGCCGCTCTGTAAATCCTTGTTGAAAGAATGAAGTGTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp TTGACACTTCATTCTTTCAACAAGGATTTACAGAGCGGCTACTCCCTCAGGTGCTTGTTTCTCCGAATGTaGAATAGGTTCCGAAAGCAC +
Preference number: 4 (lower is better)
Translates to: LTLHSFNKDLQSGYSLRCLFLRM*NRFRKH
Trigger: GTGCTTTCGGAACCTATTCCACATTCGGAGAAACAA...GCACCTGAGGGAGTAGCCGCTCTGTAAATCCTTGTTGAAAGAATGAAGTGTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CCA 90 bp CTTGGGACTATGGCATTTGGGATTGCGTCTTTTGGGATTCACACACATCCCAGGTTTTATTGTGTGAAGTaGCTGATGTGTTCTGTTGTG +
Preference number: 4 (lower is better)
Translates to: LGTMAFGIASFGIHTHPRFYCVK*LMCSVV
Trigger: CACAACAGAACACATCAGCCACTTCACACAATAAAA...CCTGGGATGTGTGTGAATCCCAAAAGACGCAATCCCAAATGCCATAGTCCCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR GCA 90 bp TTGACACTTCATTCTTTCAACAAGGATTTACAGAGCGGCTACTCCCTCAGGTGCCCAAGCATAGTGACATaGATGTATACATTTCCCATT +
Preference number: 4 (lower is better)
Translates to: LTLHSFNKDLQSGYSLRCPSIVT*MYTFPI
Trigger: AATGGGAAATGTATACATGCATGTCACTATGCTTGG...GCACCTGAGGGAGTAGCCGCTCTGTAAATCCTTGTTGAAAGAATGAAGTGTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS CCA 90 bp GGGCGGGCGAGGCCAGCTGCTCCACACTGCCCTGGAGAGGGCCCCTaGGAACCTTGCTCTCCAGGCCCTGAGCAGCCTGGGTTGGGCTCT +
Preference number: 5 (lower is better)
Translates to: GRARPAAPHCPGEGP*EPCSPGPEQPGLGS
Trigger: AGAGCCCAACCCAGGCTGCTCAGGGCCTGGAGAGCAAGGTTCCCAGGGGCCCTCTCCAGGGCAGTGTGGAGCAGCTGGCCTCGCCCGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS CCA 90 bp AGATGGGGCTCAGCCATGGCTGGCCCAGAGGCCCCCACTTCTGGCTaGCCACAGAGGAGGCCCTCACGGGCCAGGAGGCTGCAGCGGCAT +
Preference number: 5 (lower is better)
Translates to: RWGSAMAGPEAPTSG*PQRRPSRARRLQRH
Trigger: ATGCCGCTGCAGCCTCCTGGCCCGTGAGGGCCTCCTCTGTGGCCAGCCAGAAGTGGGGGCCTCTGGGCCAGCCATGGCTGAGCCCCATCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS CCA 90 bp CTACAGATGGGGCTCAGCCATGGCTGGCCCAGAGGCCCCCACTTCTaGCTGGCCACAGAGGAGGCCCTCACGGGCCAGGAGGCTGCAGCG +
Preference number: 5 (lower is better)
Translates to: LQMGLSHGWPRGPHF*LATEEALTGQEAAA
Trigger: CGCTGCAGCCTCCTGGCCCGTGAGGGCCTCCTCTGTGGCCAGCCAGAAGTGGGGGCCTCTGGGCCAGCCATGGCTGAGCCCCATCTGTAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS GCA 90 bp AGGGCATCTGGGGCACAAAGTGGCGGTAGTCGATCATGCGCCGGCTaGCCGGGGAGCCCGGGAAGCTTGCACTGCCCACCAGCTGCCCTG +
Preference number: 5 (lower is better)
Translates to: RASGAQSGGSRSCAG*PGSPGSLHCPPAAL
Trigger: CAGGGCAGCTGGTGGGCAGTGCAAGCTTCCCGGGCTCCCCGGGCAGCCGGCGCATGATCGACTACCGCCACTTTGTGCCCCAGATGCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321420.5
ENST00000423981.1
ENST00000431758.1
ENST00000458606.5
CDS CCA 90 bp CCGTGTGCCACCTGCTCCACAGCCTCTGTGCTGAGCTGCAAGGGCTaGTCCTCCACAGAGGCCCAGGCCTGGACACCTAGCCCGGTGGGC +
Preference number: 5 (lower is better)
Translates to: PCATCSTASVLSCKG*SSTEAQAWTPSPVG
Trigger: GCCCACCGGGCTAGGTGTCCAGGCCTGGGCCTCTGTGGAGGACCAGCCCTTGCAGCTCAGCACAGAGGCTGTGGAGCAGGTGGCACACGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS CCA 90 bp GAACTCCACCGGGCAGCAGGGGCTGAGCGGGGCTCAGAGTCCAGCTaGCTGCCGTGTGCCACCTGCTCCACAGCCTCTGTGCTGAGCTGC +
Preference number: 5 (lower is better)
Translates to: ELHRAAGAERGSESS*LPCATCSTASVLSC
Trigger: GCAGCTCAGCACAGAGGCTGTGGAGCAGGTGGCACACGGCAGCCAGCTGGACTCTGAGCCCCGCTCAGCCCCTGCTGCCCGGTGGAGTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS GCA 90 bp CTTCAGGGCTGCCACACGGGCCACACAGCCTGCCAGCATGGGCTCTaGATCCAGAGTGTCACCTCCGTGACCTGGCCTCCAGGGGCCTCG +
Preference number: 5 (lower is better)
Translates to: LQGCHTGHTACQHGL*IQSVTSVTWPPGAS
Trigger: CGAGGCCCCTGGAGGCCAGGTCACGGAGGTGACACTCTGGATGCAGAGCCCATGCTGGCAGGCTGTGTGGCCCGTGTGGCAGCCCTGAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS GCA 90 bp GGGGCTGAGCGGGGCTCAGAGTCCAGCTGGCTGCCGTGTGCCACCTaGTCCACAGCCTCTGTGCTGAGCTGCAAGGGCTGGTCCTCCACA +
Preference number: 5 (lower is better)
Translates to: GAERGSESSWLPCAT*STASVLSCKGWSST
Trigger: TGTGGAGGACCAGCCCTTGCAGCTCAGCACAGAGGCTGTGGAGCAGGTGGCACACGGCAGCCAGCTGGACTCTGAGCCCCGCTCAGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS CCA 90 bp TCTGTGCTGAGCTGCAAGGGCTGGTCCTCCACAGAGGCCCAGGCCTaGACACCTAGCCCGGTGGGCTCCACCCTGAGCCAGCTCAGGTCC +
Preference number: 5 (lower is better)
Translates to: SVLSCKGWSSTEAQA*TPSPVGSTLSQLRS
Trigger: GGACCTGAGCTGGCTCAGGGTGGAGCCCACCGGGCTAGGTGTCCAGGCCTGGGCCTCTGTGGAGGACCAGCCCTTGCAGCTCAGCACAGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS TCA 90 bp CCACAGAGGCCCAGGCCTGGACACCTAGCCCGGTGGGCTCCACCCTaGGCCAGCTCAGGTCCTGGACACGATCTCGACACCTCTGGTCCT +
Preference number: 5 (lower is better)
Translates to: PQRPRPGHLARWAPP*ASSGPGHDLDTSGP
Trigger: AGGACCAGAGGTGTCGAGATCGTGTCCAGGACCTGAGCTGGCTCAGGGTGGAGCCCACCGGGCTAGGTGTCCAGGCCTGGGCCTCTGTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS CCA 90 bp TGGACACGGATTCGGGCTGCTCGCTCTTGGGGGTGCCTGTGTCGATaGAGCTGGCTTTGGAGCCGCTGCGAGGGTCCCTGCAGGGGCAGA +
Preference number: 5 (lower is better)
Translates to: WTRIRAARSWGCLCR*SWLWSRCEGPCRGR
Trigger: TCTGCCCCTGCAGGGACCCTCGCAGCGGCTCCAAAGCCAGCTCCATCGACACAGGCACCCCCAAGAGCGAGCAGCCCGAATCCGTGTCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS CCA 90 bp CCTGGTGCATGTGAGCCTGTCCTACAGATGGGGCTCAGCCATGGCTaGCCCAGAGGCCCCCACTTCTGGCTGGCCACAGAGGAGGCCCTC +
Preference number: 5 (lower is better)
Translates to: PGACEPVLQMGLSHG*PRGPHFWLATEEAL
Trigger: GAGGGCCTCCTCTGTGGCCAGCCAGAAGTGGGGGCCTCTGGGCCAGCCATGGCTGAGCCCCATCTGTAGGACAGGCTCACATGCACCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CAA 90 bp GGACGCCCTTCAGGCCCTCAGCATGTTGTAGCCACCTGTCCTGGGGCAGCGAGTGGCACTGGGGCTGGCTaGGGGGCCCTTCTCACTGTG +
Preference number: 5 (lower is better)
Translates to: GRPSGPQHVVATCPGAASGTGAG*GALLTV
Trigger: CACAGTGAGAAGGGCCCCCAAGCCAGCCCCAGTGCC...ACTCGCTGCCCCAGGACAGGTGGCTACAACATGCTGAGGGCCTGAAGGGCGTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS TCA 90 bp GCCCATGTCTTGCCTTGGAGGCCATGCGGCCGGGGGCTGTTCGTTTaGGCTGATCTTCAGGGCTGCCACACGGGCCACACAGCCTGCCAG +
Preference number: 5 (lower is better)
Translates to: AHVLPWRPCGRGLFV*ADLQGCHTGHTACQ
Trigger: CTGGCAGGCTGTGTGGCCCGTGTGGCAGCCCTGAAGATCAGCTCAAACGAACAGCCCCCGGCCGCATGGCCTCCAAGGCAAGACATGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS GCA 90 bp GGAAGCTTGCACTGCCCACCAGCTGCCCTGTGGCAGCCGTGGCCCTaGCTGCCCCAGACATGCTGTCGTGAGTCTTGCACTTTCGCACCG +
Preference number: 5 (lower is better)
Translates to: GSLHCPPAALWQPWP*LPQTCCRESCTFAP
Trigger: CGGTGCGAAAGTGCAAGACTCACGACAGCATGTCTGGGGCAGGCAGGGCCACGGCTGCCACAGGGCAGCTGGTGGGCAGTGCAAGCTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321420.5
ENST00000423981.1
ENST00000431758.1
ENST00000458606.5
CDS GCA 90 bp CCTCGTCACTTGTGGACACGGATTCGGGCTGCTCGCTCTTGGGGGTaGCTGTGTCGATGGAGCTGGCTTTGGAGCCGCTGCGAGGGTCCC +
Preference number: 5 (lower is better)
Translates to: PRHLWTRIRAARSWG*LCRWSWLWSRCEGP
Trigger: GGGACCCTCGCAGCGGCTCCAAAGCCAGCTCCATCGACACAGGCACCCCCAAGAGCGAGCAGCCCGAATCCGTGTCCACAAGTGACGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS TCA 90 bp CACTCGGAAGCTGCATATGGACAGTGGCGTCCCCAGGGCCGGCCCTaGCAGACTCTCAGACACGCACAGGTCATCATCTGGGCTGGGGCC +
Preference number: 5 (lower is better)
Translates to: HSEAAYGQWRPQGRP*QTLRHAQVIIWAGA
Trigger: GGCCCCAGCCCAGATGATGACCTGTGCGTGTCTGAGAGTCTGTCAGGGCCGGCCCTGGGGACGCCACTGTCCATATGCAGCTTCCGAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS TCA 90 bp TGTCTTGCCTTGGAGGCCATGCGGCCGGGGGCTGTTCGTTTGAGCTaGTCTTCAGGGCTGCCACACGGGCCACACAGCCTGCCAGCATGG +
Preference number: 5 (lower is better)
Translates to: CLALEAMRPGAVRLS*SSGLPHGPHSLPAW
Trigger: CCATGCTGGCAGGCTGTGTGGCCCGTGTGGCAGCCCTGAAGATCAGCTCAAACGAACAGCCCCCGGCCGCATGGCCTCCAAGGCAAGACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS TCA 90 bp TGCCCTGTGGCAGCCGTGGCCCTGCCTGCCCCAGACATGCTGTCGTaGGTCTTGCACTTTCGCACCGGTTTGAAGGTGGCTCCACAGAGG +
Preference number: 5 (lower is better)
Translates to: CPVAAVALPAPDMLS*VLHFRTGLKVAPQR
Trigger: CCTCTGTGGAGCCACCTTCAAACCGGTGCGAAAGTGCAAGACTCACGACAGCATGTCTGGGGCAGGCAGGGCCACGGCTGCCACAGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321420.5
ENST00000423981.1
ENST00000431758.1
ENST00000458606.5
CDS GCA 90 bp CTCCGGGCCCTCGTTCAGCTCCAGAGATGGCACCGAGCTCTCATCTaGGAACACCTCCCCACAACCCGTGAGCGAGTCGAAGCTCTGGAG +
Preference number: 5 (lower is better)
Translates to: LRALVQLQRWHRALI*EHLPTTRERVEALE
Trigger: CTCCAGAGCTTCGACTCGCTCACGGGTTGTGGGGAGGTGTTCGCAGATGAGAGCTCGGTGCCATCTCTGGAGCTGAACGAGGGCCCGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS GCA 90 bp AGTGACCTCGTGTCTCTTCCTCTCGAGAGGCATCCCTGGACAGTGTaGCAGTCCCTTGTGTGGCCCCTCCGAGGGCCTTGCTCTCTCCGG +
Preference number: 5 (lower is better)
Translates to: SDLVSLPLERHPWTV*QSLVWPLRGPCSLR
Trigger: CCGGAGAGAGCAAGGCCCTCGGAGGGGCCACACAAGGGACTGGCACACTGTCCAGGGATGCCTCTCGAGAGGAAGAGACACGAGGTCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS CCA 90 bp AGTAGCCCTCGTCACTTGTGGACACGGATTCGGGCTGCTCGCTCTTaGGGGTGCCTGTGTCGATGGAGCTGGCTTTGGAGCCGCTGCGAG +
Preference number: 5 (lower is better)
Translates to: SSPRHLWTRIRAARS*GCLCRWSWLWSRCE
Trigger: CTCGCAGCGGCTCCAAAGCCAGCTCCATCGACACAGGCACCCCCAAGAGCGAGCAGCCCGAATCCGTGTCCACAAGTGACGAGGGCTACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS CCA 90 bp ACACGCACAGGTCATCATCTGGGCTGGGGCCAAGAGGACCCTCGCTaGGGTCGTGGAAGAGCTCGTAGAGGGCGTCCCCACTGTAGCTGT +
Preference number: 5 (lower is better)
Translates to: TRTGHHLGWGQEDPR*GRGRARRGRPHCSC
Trigger: ACAGCTACAGTGGGGACGCCCTCTACGAGCTCTTCCACGACCCCAGCGAGGGTCCTCTTGGCCCCAGCCCAGATGATGACCTGTGCGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS CCA 90 bp CCGGCCCTGACAGACTCTCAGACACGCACAGGTCATCATCTGGGCTaGGGCCAAGAGGACCCTCGCTGGGGTCGTGGAAGAGCTCGTAGA +
Preference number: 5 (lower is better)
Translates to: PALTDSQTRTGHHLG*GQEDPRWGRGRARR
Trigger: TCTACGAGCTCTTCCACGACCCCAGCGAGGGTCCTCTTGGCCCCAGCCCAGATGATGACCTGTGCGTGTCTGAGAGTCTGTCAGGGCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS CCA 90 bp CTGAGTAGGGTAGGCCATGGATGGTGGTCATGCTGGGGGAGCTGCTaGACTGTTTCTGCTCCAGCATGTCAGGGCCCCTGGCCCAGCGCT +
Preference number: 5 (lower is better)
Translates to: LSRVGHGWWSCWGSC*TVSAPACQGPWPSA
Trigger: AGCGCTGGGCCAGGGGCCCTGACATGCTGGAGCAGAAACAGTCCAGCAGCTCCCCCAGCATGACCACCATCCATGGCCTACCCTACTCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CAA 90 bp TCCTGTGCTGCCTTCTTCTCGAGCCAGGACAGCACAACTCACGCTCCTCTTGGTGGGAGCCCGGGAAGCTaGCACTGCCCACCAGCTGCC +
Preference number: 5 (lower is better)
Translates to: SCAAFFSSQDSTTHAPLGGSPGS*HCPPAA
Trigger: GGCAGCTGGTGGGCAGTGCAAGCTTCCCGGGCTCCC...ACCAAGAGGAGCGTGAGTTGTGCTGTCCTGGCTCGAGAAGAAGGCAGCACAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CAA 90 bp CCTCAGCTACAGATCCTGTGCTGCCTTCTTCTCGAGCCAGGACAGCACAACTCAGCCCCTCCGAGGGCCTaGCTCTCTCCGGCGAGCAGG +
Preference number: 5 (lower is better)
Translates to: PQLQILCCLLLEPGQHNSAPPRA*LSPASR
Trigger: CCTGCTCGCCGGAGAGAGCAAGGCCCTCGGAGGGGC...TGAGTTGTGCTGTCCTGGCTCGAGAAGAAGGCAGCACAGGATCTGTAGCTGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CAA 90 bp GGACGCCCTTCAGGCCCTCAGCATGTTGTAGCCACCTGTCCTGGGGCAGCGAGTGGAAGAGCAGGGCCTTaGGAGCTGGGACGGGACAAA +
Preference number: 5 (lower is better)
Translates to: GRPSGPQHVVATCPGAASGRAGP*ELGRDK
Trigger: TTTGTCCCGTCCCAGCTCCAAAGGCCCTGCTCTTCC...ACTCGCTGCCCCAGGACAGGTGGCTACAACATGCTGAGGGCCTGAAGGGCGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS TCA 90 bp TGCGAACACCTCCCCACAACCCGTGAGCGAGTCGAAGCTCTGGAGTaGGGCCACGTCCTCACACAGGGCCCTGCAGAGACCAAAGGATGC +
Preference number: 5 (lower is better)
Translates to: CEHLPTTRERVEALE*GHVLTQGPAETKGC
Trigger: GCATCCTTTGGTCTCTGCAGGGCCCTGTGTGAGGACGTGGCCTCACTCCAGAGCTTCGACTCGCTCACGGGTTGTGGGGAGGTGTTCGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS TCA 90 bp GAGATGGCACCGAGCTCTCATCTGCGAACACCTCCCCACAACCCGTaGGCGAGTCGAAGCTCTGGAGTGAGGCCACGTCCTCACACAGGG +
Preference number: 5 (lower is better)
Translates to: EMAPSSHLRTPPHNP*ASRSSGVRPRPHTG
Trigger: CCCTGTGTGAGGACGTGGCCTCACTCCAGAGCTTCGACTCGCTCACGGGTTGTGGGGAGGTGTTCGCAGATGAGAGCTCGGTGCCATCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS GCA 90 bp GCCAGCTCAGGTCCTGGACACGATCTCGACACCTCTGGTCCTGTGTaGTGGCTGAGTAGGGTAGGCCATGGATGGTGGTCATGCTGGGGG +
Preference number: 5 (lower is better)
Translates to: ASSGPGHDLDTSGPV*WLSRVGHGWWSCWG
Trigger: CCCCCAGCATGACCACCATCCATGGCCTACCCTACTCAGCCAGCACACAGGACCAGAGGTGTCGAGATCGTGTCCAGGACCTGAGCTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS CCA 90 bp AGCCTTCAGAGTGACCTCGTGTCTCTTCCTCTCGAGAGGCATCCCTaGACAGTGTGCCAGTCCCTTGTGTGGCCCCTCCGAGGGCCTTGC +
Preference number: 5 (lower is better)
Translates to: SLQSDLVSLPLERHP*TVCQSLVWPLRGPC
Trigger: GCAAGGCCCTCGGAGGGGCCACACAAGGGACTGGCACACTGTCCAGGGATGCCTCTCGAGAGGAAGAGACACGAGGTCACTCTGAAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CAA 90 bp AGCTGGTGGGTTCAGGCAAGGATGCCTCCACATGAACATGCTACCCTCTGCATGGGGAGCCCGGGAAGCTaGCACTGCCCACCAGCTGCC +
Preference number: 5 (lower is better)
Translates to: SWWVQARMPPHEHATLCMGSPGS*HCPPAA
Trigger: GGCAGCTGGTGGGCAGTGCAAGCTTCCCGGGCTCCC...CATGCAGAGGGTAGCATGTTCATGTGGAGGCATCCTTGCCTGAACCCACCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CAA 90 bp GGACGCCCTTCAGGCCCTCAGCATGTTGTAGCCACCTGTCCTGGGGCAGCGAGTCAGGCTCGCTGGCCTTaGGACTCTGGAACTTACACC +
Preference number: 5 (lower is better)
Translates to: GRPSGPQHVVATCPGAASQARWP*DSGTYT
Trigger: GGTGTAAGTTCCAGAGTCCAAAGGCCAGCGAGCCTG...ACTCGCTGCCCCAGGACAGGTGGCTACAACATGCTGAGGGCCTGAAGGGCGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CAA 90 bp GGACGCCCTTCAGGCCCTCAGCATGTTGTAGCCACCTGTCCTGGGGCAGCGAGTCAACTCACGCTCCTCTaGGTGGGAGCTCTGCATGAG +
Preference number: 5 (lower is better)
Translates to: GRPSGPQHVVATCPGAASQLTLL*VGALHE
Trigger: CTCATGCAGAGCTCCCACCAAGAGGAGCGTGAGTTG...ACTCGCTGCCCCAGGACAGGTGGCTACAACATGCTGAGGGCCTGAAGGGCGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS TCA 90 bp GCTGCTGCTGACGCACTGAGCGATTCACACTGTCCCAGAACCTGGTaGAGTCAGAGGCTTCATTCTGGGCGGGCGAGGCCAGCTGCTCCA +
Preference number: 5 (lower is better)
Translates to: AAADALSDSHCPRTW*SQRLHSGRARPAAP
Trigger: TGGAGCAGCTGGCCTCGCCCGCCCAGAATGAAGCCTCTGACTTCACCAGGTTCTGGGACAGTGTGAATCGCTCAGTGCGTCAGCAGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS CCA 90 bp CCCTCCCTGGCTGCAGCCACGGCTGCTGGGTCTGGGGGTTTCTCGTaGGAAACCTGCAGGCTGGACTTGATGAAGGTCTTTCCTCTCTTC +
Preference number: 5 (lower is better)
Translates to: PSLAAATAAGSGGFS*ETCRLDLMKVFPLF
Trigger: GAAGAGAGGAAAGACCTTCATCAAGTCCAGCCTGCAGGTTTCCCACGAGAAACCCCCAGACCCAGCAGCCGTGGCTGCAGCCAGGGAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321420.5
ENST00000423981.1
ENST00000431758.1
ENST00000458606.5
CDS CCA 90 bp AGCTCAGGTCCTGGACACGATCTCGACACCTCTGGTCCTGTGTGCTaGCTGAGTAGGGTAGGCCATGGATGGTGGTCATGCTGGGGGAGC +
Preference number: 5 (lower is better)
Translates to: SSGPGHDLDTSGPVC*LSRVGHGWWSCWGS
Trigger: GCTCCCCCAGCATGACCACCATCCATGGCCTACCCTACTCAGCCAGCACACAGGACCAGAGGTGTCGAGATCGTGTCCAGGACCTGAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CAA 90 bp AGCTGGTGGGTTCAGGCAAGGATGCCTCCACATGAACATGCTACCCTCTGCATGGGCACTGGGGCTGGCTaGGGGGCCCTTCTCACTGTG +
Preference number: 5 (lower is better)
Translates to: SWWVQARMPPHEHATLCMGTGAG*GALLTV
Trigger: CACAGTGAGAAGGGCCCCCAAGCCAGCCCCAGTGCC...CATGCAGAGGGTAGCATGTTCATGTGGAGGCATCCTTGCCTGAACCCACCAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CAA 90 bp TGCCAAGTTGACAAGGGGTGGACCTGTGGACTTCATTTTGGGTGTGAACTCGACGCCCCTCCGAGGGCCTaGCTCTCTCCGGCGAGCAGG +
Preference number: 5 (lower is better)
Translates to: CQVDKGWTCGLHFGCELDAPPRA*LSPASR
Trigger: CCTGCTCGCCGGAGAGAGCAAGGCCCTCGGAGGGGC...GTCGAGTTCACACCCAAAATGAAGTCCACAGGTCCACCCCTTGTCAACTTGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CAA 90 bp CCAGCCACCTTCTCCCTTCATGGTTCTGAATGTCGGGGTGCTGCACATGTGTTGCAGTGTGCCAGTCCCTaGTGTGGCCCCTCCGAGGGC +
Preference number: 5 (lower is better)
Translates to: PATFSLHGSECRGAAHVLQCASP*CGPSEG
Trigger: GCCCTCGGAGGGGCCACACAAGGGACTGGCACACTG...CAACACATGTGCAGCACCCCGACATTCAGAACCATGAAGGGAGAAGGTGGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CAA 90 bp AGCTGGTGGGTTCAGGCAAGGATGCCTCCACATGAACATGCTACCCTCTGCATGTGCCCATGTCTTGCCTaGGAGGCCATGCGGCCGGGG +
Preference number: 5 (lower is better)
Translates to: SWWVQARMPPHEHATLCMCPCLA*EAMRPG
Trigger: CCCCGGCCGCATGGCCTCCAAGGCAAGACATGGGCA...CATGCAGAGGGTAGCATGTTCATGTGGAGGCATCCTTGCCTGAACCCACCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CAA 90 bp TCCTGTGCTGCCTTCTTCTCGAGCCAGGACAGCACAACTCACGCTCCTCTTGGTCCCACTGCCCATGTCTaGCCTTGGAGGCCATGCGGC +
Preference number: 5 (lower is better)
Translates to: SCAAFFSSQDSTTHAPLGPTAHV*PWRPCG
Trigger: GCCGCATGGCCTCCAAGGCAAGACATGGGCAGTGGG...ACCAAGAGGAGCGTGAGTTGTGCTGTCCTGGCTCGAGAAGAAGGCAGCACAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CAA 90 bp CTTCGCGCTGTCTTTGGCGGTGGGCTGCCTGAGCTGGTGGGTTCAGGCAAGGATAGCTGCGCCCCTTTGTaGGGGCATCTGTCGTATTCT +
Preference number: 5 (lower is better)
Translates to: LRAVFGGGLPELVGSGKDSCAPL*GHLSYS
Trigger: AGAATACGACAGATGCCCCAACAAAGGGGCGCAGCT...ATCCTTGCCTGAACCCACCAGCTCAGGCAGCCCACCGCCAAAGACAGCGCGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CAA 90 bp GACAGCGTGGAGGGAGTGGAGTCAAAAGCCTTTGTTACTTGCAGGCAGAGCCGATCGGGCTGCTCGCTCTaGGGGGTGCCTGTGTCGATG +
Preference number: 5 (lower is better)
Translates to: DSVEGVESKAFVTCRQSRSGCSL*GVPVSM
Trigger: CATCGACACAGGCACCCCCAAGAGCGAGCAGCCCGA...TCGGCTCTGCCTGCAAGTAACAAAGGCTTTTGACTCCACTCCCTCCACGCTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CAA 90 bp CTTCGCGCTGTCTTTGGCGGTGGGCTGCCTGAGCTGGTGGGTTCAGGCAAGGATGCCTGGTCAGAAGCCTaGCTGCACACTTTGGAACCT +
Preference number: 5 (lower is better)
Translates to: LRAVFGGGLPELVGSGKDAWSEA*LHTLEP
Trigger: AGGTTCCAAAGTGTGCAGCAAGGCTTCTGACCAGGC...ATCCTTGCCTGAACCCACCAGCTCAGGCAGCCCACCGCCAAAGACAGCGCGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CAA 90 bp AGCTGGTGGGTTCAGGCAAGGATGCCTCCACATGAACATGCTACCCTCTGCATGCTGCTGGAGGGCCACTaGTGGCTGGCACCCAAGGGT +
Preference number: 5 (lower is better)
Translates to: SWWVQARMPPHEHATLCMLLEGH*WLAPKG
Trigger: ACCCTTGGGTGCCAGCCACAAGTGGCCCTCCAGCAG...CATGCAGAGGGTAGCATGTTCATGTGGAGGCATCCTTGCCTGAACCCACCAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CAA 90 bp ATCTGGACGGGCCTGGTCAGAAGCCTTGCTGCACACTTTGGAACCTGTGATGTGCTGCTGGAGGGCCACTaGTGGCTGGCACCCAAGGGT +
Preference number: 5 (lower is better)
Translates to: IWTGLVRSLAAHFGTCDVLLEGH*WLAPKG
Trigger: ACCCTTGGGTGCCAGCCACAAGTGGCCCTCCAGCAG...CACATCACAGGTTCCAAAGTGTGCAGCAAGGCTTCTGACCAGGCCCGTCCAGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS CCA 90 bp CCTCAAGTCCTGGCGAGAAGGAATCATAGTAGCCCTCGTCACTTGTaGACACGGATTCGGGCTGCTCGCTCTTGGGGGTGCCTGTGTCGA +
Preference number: 5 (lower is better)
Translates to: PQVLARRNHSSPRHL*TRIRAARSWGCLCR
Trigger: TCGACACAGGCACCCCCAAGAGCGAGCAGCCCGAATCCGTGTCCACAAGTGACGAGGGCTACTATGATTCCTTCTCGCCAGGACTTGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CAA 90 bp GGACGCCCTTCAGGCCCTCAGCATGTTGTAGCCACCTGTCCTGGGGCAGCGAGTTTCCGAAAGCACTTCTaGGGCCTCTTCAGGGAAATC +
Preference number: 5 (lower is better)
Translates to: GRPSGPQHVVATCPGAASFRKHF*GLFREI
Trigger: GATTTCCCTGAAGAGGCCCAAGAAGTGCTTTCGGAA...ACTCGCTGCCCCAGGACAGGTGGCTACAACATGCTGAGGGCCTGAAGGGCGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CAA 90 bp CCAGCCACCTTCTCCCTTCATGGTTCTGAATGTCGGGGTGCTGCACATGTGTTGTGTGTCCAGCCGGGATaGGTCCCTGTCTGTCCCCTG +
Preference number: 5 (lower is better)
Translates to: PATFSLHGSECRGAAHVLCVQPG*VPVCPL
Trigger: CAGGGGACAGACAGGGACCAATCCCGGCTGGACACA...CAACACATGTGCAGCACCCCGACATTCAGAACCATGAAGGGAGAAGGTGGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CAA 90 bp ATCTGGACGGGCCTGGTCAGAAGCCTTGCTGCACACTTTGGAACCTGTGATGTGTGTGTCCAGCCGGGATaGGTCCCTGTCTGTCCCCTG +
Preference number: 5 (lower is better)
Translates to: IWTGLVRSLAAHFGTCDVCVQPG*VPVCPL
Trigger: CAGGGGACAGACAGGGACCAATCCCGGCTGGACACA...CACATCACAGGTTCCAAAGTGTGCAGCAAGGCTTCTGACCAGGCCCGTCCAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CAA 90 bp GGACGCCCTTCAGGCCCTCAGCATGTTGTAGCCACCTGTCCTGGGGCAGCGAGTGAGCTACTGCCTTGCTaGGGGCTTTATTTGGAGACT +
Preference number: 5 (lower is better)
Translates to: GRPSGPQHVVATCPGAASELLPC*GLYLET
Trigger: AGTCTCCAAATAAAGCCCCAAGCAAGGCAGTAGCTC...ACTCGCTGCCCCAGGACAGGTGGCTACAACATGCTGAGGGCCTGAAGGGCGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CAA 90 bp GGACGCCCTTCAGGCCCTCAGCATGTTGTAGCCACCTGTCCTGGGGCAGCGAGTGCCGAGGAGAATCCATaGGCTTCTTCCCAAAAAGCA +
Preference number: 5 (lower is better)
Translates to: GRPSGPQHVVATCPGAASAEENP*ASSQKA
Trigger: TGCTTTTTGGGAAGAAGCCAATGGATTCTCCTCGGC...ACTCGCTGCCCCAGGACAGGTGGCTACAACATGCTGAGGGCCTGAAGGGCGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CAA 90 bp GGACGCCCTTCAGGCCCTCAGCATGTTGTAGCCACCTGTCCTGGGGCAGCGAGTGCCAAGTCCTCAGTCTaGTTTCTCCGAATGTGGAAT +
Preference number: 5 (lower is better)
Translates to: GRPSGPQHVVATCPGAASAKSSV*FLRMWN
Trigger: ATTCCACATTCGGAGAAACAAGACTGAGGACTTGGC...ACTCGCTGCCCCAGGACAGGTGGCTACAACATGCTGAGGGCCTGAAGGGCGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CAA 90 bp TGCCAAGTTGACAAGGGGTGGACCTGTGGACTTCATTTTGGGTGTGAACTCGACTCGATGGAGCTGGCTTaGGAGCCGCTGCGAGGGTCC +
Preference number: 5 (lower is better)
Translates to: CQVDKGWTCGLHFGCELDSMELA*EPLRGS
Trigger: GGACCCTCGCAGCGGCTCCAAAGCCAGCTCCATCGA...GTCGAGTTCACACCCAAAATGAAGTCCACAGGTCCACCCCTTGTCAACTTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CAA 90 bp CTTCGCGCTGTCTTTGGCGGTGGGCTGCCTGAGCTGGTGGGTTCAGGCAAGGATTACCGGAAGTATCTGTaGTCGAAGTGGCTGCAGACT +
Preference number: 5 (lower is better)
Translates to: LRAVFGGGLPELVGSGKDYRKYL*SKWLQT
Trigger: AGTCTGCAGCCACTTCGACAACAGATACTTCCGGTA...ATCCTTGCCTGAACCCACCAGCTCAGGCAGCCCACCGCCAAAGACAGCGCGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CAA 90 bp CTAGGTGTGGAAGATCCACCCTCAATGTTGGTGGGCAGCATTCAATCTGCTGAGCCCACTGCCCATGTCTaGCCTTGGAGGCCATGCGGC +
Preference number: 5 (lower is better)
Translates to: LGVEDPPSMLVGSIQSAEPTAHV*PWRPCG
Trigger: GCCGCATGGCCTCCAAGGCAAGACATGGGCAGTGGG...CTCAGCAGATTGAATGCTGCCCACCAACATTGAGGGTGGATCTTCCACACCTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CAA 90 bp GGACGCCCTTCAGGCCCTCAGCATGTTGTAGCCACCTGTCCTGGGGCAGCGAGTCTTCCCAAAAAGCATTaGGCCATCCATGGCTCTAGT +
Preference number: 5 (lower is better)
Translates to: GRPSGPQHVVATCPGAASLPKKH*AIHGSS
Trigger: ACTAGAGCCATGGATGGCCAAATGCTTTTTGGGAAG...ACTCGCTGCCCCAGGACAGGTGGCTACAACATGCTGAGGGCCTGAAGGGCGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CAA 90 bp CTTCGCGCTGTCTTTGGCGGTGGGCTGCCTGAGCTGGTGGGTTCAGGCAAGGATATGTGTTGTGACATTTaGGGGAGTGAGGTCCACAGC +
Preference number: 5 (lower is better)
Translates to: LRAVFGGGLPELVGSGKDMCCDI*GSEVHS
Trigger: GCTGTGGACCTCACTCCCCAAAATGTCACAACACAT...ATCCTTGCCTGAACCCACCAGCTCAGGCAGCCCACCGCCAAAGACAGCGCGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CAA 90 bp AGCTGGTGGGTTCAGGCAAGGATGCCTCCACATGAACATGCTACCCTCTGCATGGGAAGAGCAGGGCCTTaGGAGCTGGGACGGGACAAA +
Preference number: 5 (lower is better)
Translates to: SWWVQARMPPHEHATLCMGRAGP*ELGRDK
Trigger: TTTGTCCCGTCCCAGCTCCAAAGGCCCTGCTCTTCC...CATGCAGAGGGTAGCATGTTCATGTGGAGGCATCCTTGCCTGAACCCACCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS TCA 90 bp TCTCCTGAAAGTGGTCATGAAGACACATGCAGTTCCTGGTGCATGTaGGCCTGTCCTACAGATGGGGCTCAGCCATGGCTGGCCCAGAGG +
Preference number: 5 (lower is better)
Translates to: SPESGHEDTCSSWCM*ACPTDGAQPWLAQR
Trigger: CCTCTGGGCCAGCCATGGCTGAGCCCCATCTGTAGGACAGGCTCACATGCACCAGGAACTGCATGTGTCTTCATGACCACTTTCAGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS CCA 90 bp TGGTGGCCCAGGCTCCTTCTGGGAGCAGGGCCAGGTAGAAGGAACTaGGGCCTTATTTTTACCGGAAGTATCTGTTGTCGAAGTGGCTGC +
Preference number: 5 (lower is better)
Translates to: WWPRLLLGAGPGRRN*GLIFTGSICCRSGC
Trigger: GCAGCCACTTCGACAACAGATACTTCCGGTAAAAATAAGGCCCCAGTTCCTTCTACCTGGCCCTGCTCCCAGAAGGAGCCTGGGCCACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CAA 90 bp GACAGCGTGGAGGGAGTGGAGTCAAAAGCCTTTGTTACTTGCAGGCAGAGCCGAGCATCTGTCGTATTCTaGGGCACTGGGGCTGGCTTG +
Preference number: 5 (lower is better)
Translates to: DSVEGVESKAFVTCRQSRASVVF*GTGAGL
Trigger: CAAGCCAGCCCCAGTGCCCAAGAATACGACAGATGC...TCGGCTCTGCCTGCAAGTAACAAAGGCTTTTGACTCCACTCCCTCCACGCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CAA 90 bp CCAGCCACCTTCTCCCTTCATGGTTCTGAATGTCGGGGTGCTGCACATGTGTTGTCCAGCTGCGCCCCTTaGTTGGGGCATCTGTCGTAT +
Preference number: 5 (lower is better)
Translates to: PATFSLHGSECRGAAHVLSSCAP*LGHLSY
Trigger: ATACGACAGATGCCCCAACAAAGGGGCGCAGCTGGA...CAACACATGTGCAGCACCCCGACATTCAGAACCATGAAGGGAGAAGGTGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CAA 90 bp ATCTGGACGGGCCTGGTCAGAAGCCTTGCTGCACACTTTGGAACCTGTGATGTGTCCAGCTGCGCCCCTTaGTTGGGGCATCTGTCGTAT +
Preference number: 5 (lower is better)
Translates to: IWTGLVRSLAAHFGTCDVSSCAP*LGHLSY
Trigger: ATACGACAGATGCCCCAACAAAGGGGCGCAGCTGGA...CACATCACAGGTTCCAAAGTGTGCAGCAAGGCTTCTGACCAGGCCCGTCCAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CAA 90 bp CCTCAGCTACAGATCCTGTGCTGCCTTCTTCTCGAGCCAGGACAGCACAACTCACACTTTCGCACCGGTTaGAAGGTGGCTCCACAGAGG +
Preference number: 5 (lower is better)
Translates to: PQLQILCCLLLEPGQHNSHFRTG*KVAPQR
Trigger: CCTCTGTGGAGCCACCTTCAAACCGGTGCGAAAGTG...TGAGTTGTGCTGTCCTGGCTCGAGAAGAAGGCAGCACAGGATCTGTAGCTGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CAA 90 bp AGCTGGTGGGTTCAGGCAAGGATGCCTCCACATGAACATGCTACCCTCTGCATGCACTTTCGCACCGGTTaGAAGGTGGCTCCACAGAGG +
Preference number: 5 (lower is better)
Translates to: SWWVQARMPPHEHATLCMHFRTG*KVAPQR
Trigger: CCTCTGTGGAGCCACCTTCAAACCGGTGCGAAAGTG...CATGCAGAGGGTAGCATGTTCATGTGGAGGCATCCTTGCCTGAACCCACCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CAA 90 bp AGCTGGTGGGTTCAGGCAAGGATGCCTCCACATGAACATGCTACCCTCTGCATGTTCCTCGGGATGCTCTaGGCCACAGCTGGCACAAAG +
Preference number: 5 (lower is better)
Translates to: SWWVQARMPPHEHATLCMFLGML*ATAGTK
Trigger: CTTTGTGCCAGCTGTGGCCAAGAGCATCCCGAGGAA...CATGCAGAGGGTAGCATGTTCATGTGGAGGCATCCTTGCCTGAACCCACCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CAA 90 bp GACAGCGTGGAGGGAGTGGAGTCAAAAGCCTTTGTTACTTGCAGGCAGAGCCGATTCCTCGGGATGCTCTaGGCCACAGCTGGCACAAAG +
Preference number: 5 (lower is better)
Translates to: DSVEGVESKAFVTCRQSRFLGML*ATAGTK
Trigger: CTTTGTGCCAGCTGTGGCCAAGAGCATCCCGAGGAA...TCGGCTCTGCCTGCAAGTAACAAAGGCTTTTGACTCCACTCCCTCCACGCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CAA 90 bp AAGGGATACCTAGAGACCTGGGAGATCATTATTCTGGGCATGTCTGTGAGGTGTCAGTGTGCCAGTCCCTaGTGTGGCCCCTCCGAGGGC +
Preference number: 5 (lower is better)
Translates to: KGYLETWEIIILGMSVRCQCASP*CGPSEG
Trigger: GCCCTCGGAGGGGCCACACAAGGGACTGGCACACTG...ACACCTCACAGACATGCCCAGAATAATGATCTCCCAGGTCTCTAGGTATCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CAA 90 bp AAGGGATACCTAGAGACCTGGGAGATCATTATTCTGGGCATGTCTGTGAGGTGTTGCCCATGTCTTGCCTaGGAGGCCATGCGGCCGGGG +
Preference number: 5 (lower is better)
Translates to: KGYLETWEIIILGMSVRCCPCLA*EAMRPG
Trigger: CCCCGGCCGCATGGCCTCCAAGGCAAGACATGGGCA...ACACCTCACAGACATGCCCAGAATAATGATCTCCCAGGTCTCTAGGTATCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CAA 90 bp CTTCGCGCTGTCTTTGGCGGTGGGCTGCCTGAGCTGGTGGGTTCAGGCAAGGATTTGGGATTGCGTCTTTaGGGATTCACACACATCCCA +
Preference number: 5 (lower is better)
Translates to: LRAVFGGGLPELVGSGKDLGLRL*GFTHIP
Trigger: TGGGATGTGTGTGAATCCCAAAAGACGCAATCCCAA...ATCCTTGCCTGAACCCACCAGCTCAGGCAGCCCACCGCCAAAGACAGCGCGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CAA 90 bp ATCTGGACGGGCCTGGTCAGAAGCCTTGCTGCACACTTTGGAACCTGTGATGTGCAGGCTCGCTGGCCTTaGGACTCTGGAACTTACACC +
Preference number: 5 (lower is better)
Translates to: IWTGLVRSLAAHFGTCDVQARWP*DSGTYT
Trigger: GGTGTAAGTTCCAGAGTCCAAAGGCCAGCGAGCCTG...CACATCACAGGTTCCAAAGTGTGCAGCAAGGCTTCTGACCAGGCCCGTCCAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CAA 90 bp CCTCAGCTACAGATCCTGTGCTGCCTTCTTCTCGAGCCAGGACAGCACAACTCACAACTCACGCTCCTCTaGGTGGGAGCTCTGCATGAG +
Preference number: 5 (lower is better)
Translates to: PQLQILCCLLLEPGQHNSQLTLL*VGALHE
Trigger: CTCATGCAGAGCTCCCACCAAGAGGAGCGTGAGTTG...TGAGTTGTGCTGTCCTGGCTCGAGAAGAAGGCAGCACAGGATCTGTAGCTGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CAA 90 bp TCCTGTGCTGCCTTCTTCTCGAGCCAGGACAGCACAACTCACGCTCCTCTTGGTGCCTGGTCAGAAGCCTaGCTGCACACTTTGGAACCT +
Preference number: 5 (lower is better)
Translates to: SCAAFFSSQDSTTHAPLGAWSEA*LHTLEP
Trigger: AGGTTCCAAAGTGTGCAGCAAGGCTTCTGACCAGGC...ACCAAGAGGAGCGTGAGTTGTGCTGTCCTGGCTCGAGAAGAAGGCAGCACAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS TCA 90 bp GTCGAAGTGGCTGCAGACTCCATAGAGGAGAACAAGCCTTCAGAGTaGCCTCGTGTCTCTTCCTCTCGAGAGGCATCCCTGGACAGTGTG +
Preference number: 5 (lower is better)
Translates to: VEVAADSIEENKPSE*PRVSSSREASLDSV
Trigger: CACACTGTCCAGGGATGCCTCTCGAGAGGAAGAGACACGAGGTCACTCTGAAGGCTTGTTCTCCTCTATGGAGTCTGCAGCCACTTCGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS CCA 90 bp AGGAGTGCCTGGGCTCTCAGCTTCCTTCTTGTCCTCCTCAAGTCCTaGCGAGAAGGAATCATAGTAGCCCTCGTCACTTGTGGACACGGA +
Preference number: 5 (lower is better)
Translates to: RSAWALSFLLVLLKS*REGIIVALVTCGHG
Trigger: TCCGTGTCCACAAGTGACGAGGGCTACTATGATTCCTTCTCGCCAGGACTTGAGGAGGACAAGAAGGAAGCTGAGAGCCCAGGCACTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CAA 90 bp AGCTGGTGGGTTCAGGCAAGGATGCCTCCACATGAACATGCTACCCTCTGCATGAGCTGCGCCCCTTTGTaGGGGCATCTGTCGTATTCT +
Preference number: 5 (lower is better)
Translates to: SWWVQARMPPHEHATLCMSCAPL*GHLSYS
Trigger: AGAATACGACAGATGCCCCAACAAAGGGGCGCAGCT...CATGCAGAGGGTAGCATGTTCATGTGGAGGCATCCTTGCCTGAACCCACCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CAA 90 bp AAGGGATACCTAGAGACCTGGGAGATCATTATTCTGGGCATGTCTGTGAGGTGTTCGATGGAGCTGGCTTaGGAGCCGCTGCGAGGGTCC +
Preference number: 5 (lower is better)
Translates to: KGYLETWEIIILGMSVRCSMELA*EPLRGS
Trigger: GGACCCTCGCAGCGGCTCCAAAGCCAGCTCCATCGA...ACACCTCACAGACATGCCCAGAATAATGATCTCCCAGGTCTCTAGGTATCCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CAA 90 bp AAGGGATACCTAGAGACCTGGGAGATCATTATTCTGGGCATGTCTGTGAGGTGTTCGGGCTGCTCGCTCTaGGGGGTGCCTGTGTCGATG +
Preference number: 5 (lower is better)
Translates to: KGYLETWEIIILGMSVRCSGCSL*GVPVSM
Trigger: CATCGACACAGGCACCCCCAAGAGCGAGCAGCCCGA...ACACCTCACAGACATGCCCAGAATAATGATCTCCCAGGTCTCTAGGTATCCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CAA 90 bp AAGGGATACCTAGAGACCTGGGAGATCATTATTCTGGGCATGTCTGTGAGGTGTAGCTTCGCGCTGTCTTaGGCGGTGGGCTGCCTGAGC +
Preference number: 5 (lower is better)
Translates to: KGYLETWEIIILGMSVRCSFALS*AVGCLS
Trigger: GCTCAGGCAGCCCACCGCCAAAGACAGCGCGAAGCT...ACACCTCACAGACATGCCCAGAATAATGATCTCCCAGGTCTCTAGGTATCCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CAA 90 bp AGCTGGTGGGTTCAGGCAAGGATGCCTCCACATGAACATGCTACCCTCTGCATGGAGAGGTTCTGGAGCTaGAGGAAGAGCAGGGCCTTT +
Preference number: 5 (lower is better)
Translates to: SWWVQARMPPHEHATLCMERFWS*RKSRAF
Trigger: AAAGGCCCTGCTCTTCCTCAAGCTCCAGAACCTCTC...CATGCAGAGGGTAGCATGTTCATGTGGAGGCATCCTTGCCTGAACCCACCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS CCA 90 bp TCGGCCGCCAGCGAGGCCAAGTCCTCAGTCTTGTTTCTCCGAATGTaGAATAGGTTCCGAAAGCACTTCTTGGGCCTCTTCAGGGAAATC +
Preference number: 5 (lower is better)
Translates to: SAASEAKSSVLFLRM*NRFRKHFLGLFREI
Trigger: GATTTCCCTGAAGAGGCCCAAGAAGTGCTTTCGGAACCTATTCCACATTCGGAGAAACAAGACTGAGGACTTGGCCTCGCTGGCGGCCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321420.5
ENST00000423981.1
ENST00000458606.5
CDS-3UTR CAA 90 bp GCTGAGGCCCAGGGAGAACAAATAAAGAAGGCAAACTGGTCTCTCTCTCAGAGCGCATCTGTCGTATTCTaGGGCACTGGGGCTGGCTTG +
Preference number: 5 (lower is better)
Translates to: AEAQGEQIKKANWSLSQSASVVF*GTGAGL
Trigger: CAAGCCAGCCCCAGTGCCCAAGAATACGACAGATGC...GCTCTGAGAGAGAGACCAGTTTGCCTTCTTTATTTGTTCTCCCTGGGCCTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CAA 90 bp TGCCAAGTTGACAAGGGGTGGACCTGTGGACTTCATTTTGGGTGTGAACTCGACAGTAGCCCTCGTCACTaGTGGACACGGATTCGGGCT +
Preference number: 5 (lower is better)
Translates to: CQVDKGWTCGLHFGCELDSSPRH*WTRIRA
Trigger: AGCCCGAATCCGTGTCCACAAGTGACGAGGGCTACT...GTCGAGTTCACACCCAAAATGAAGTCCACAGGTCCACCCCTTGTCAACTTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CAA 90 bp TGCCAAGTTGACAAGGGGTGGACCTGTGGACTTCATTTTGGGTGTGAACTCGACTTCAGCAGGCACTCCTaGCCCTTCCAGGAGCTCTGT +
Preference number: 5 (lower is better)
Translates to: CQVDKGWTCGLHFGCELDFSRHS*PFQELC
Trigger: ACAGAGCTCCTGGAAGGGCAAGGAGTGCCTGCTGAA...GTCGAGTTCACACCCAAAATGAAGTCCACAGGTCCACCCCTTGTCAACTTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CAA 90 bp CTAGGTGTGGAAGATCCACCCTCAATGTTGGTGGGCAGCATTCAATCTGCTGAGTTCAGCAGGCACTCCTaGCCCTTCCAGGAGCTCTGT +
Preference number: 5 (lower is better)
Translates to: LGVEDPPSMLVGSIQSAEFSRHS*PFQELC
Trigger: ACAGAGCTCCTGGAAGGGCAAGGAGTGCCTGCTGAA...CTCAGCAGATTGAATGCTGCCCACCAACATTGAGGGTGGATCTTCCACACCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CAA 90 bp ATCTGGACGGGCCTGGTCAGAAGCCTTGCTGCACACTTTGGAACCTGTGATGTGCCTGTGGACTTCATTTaGGGTGTGAACTCGACTGGG +
Preference number: 5 (lower is better)
Translates to: IWTGLVRSLAAHFGTCDVPVDFI*GVNSTG
Trigger: CCCAGTCGAGTTCACACCCAAAATGAAGTCCACAGG...CACATCACAGGTTCCAAAGTGTGCAGCAAGGCTTCTGACCAGGCCCGTCCAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CAA 90 bp TCCTGTGCTGCCTTCTTCTCGAGCCAGGACAGCACAACTCACGCTCCTCTTGGTTGGAGTCAAAAGCCTTaGTTACTTGCAGGCAGAGCC +
Preference number: 5 (lower is better)
Translates to: SCAAFFSSQDSTTHAPLGWSQKP*LLAGRA
Trigger: GGCTCTGCCTGCAAGTAACAAAGGCTTTTGACTCCA...ACCAAGAGGAGCGTGAGTTGTGCTGTCCTGGCTCGAGAAGAAGGCAGCACAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CAA 90 bp ATCTGGACGGGCCTGGTCAGAAGCCTTGCTGCACACTTTGGAACCTGTGATGTGTACCGGAAGTATCTGTaGTCGAAGTGGCTGCAGACT +
Preference number: 5 (lower is better)
Translates to: IWTGLVRSLAAHFGTCDVYRKYL*SKWLQT
Trigger: AGTCTGCAGCCACTTCGACAACAGATACTTCCGGTA...CACATCACAGGTTCCAAAGTGTGCAGCAAGGCTTCTGACCAGGCCCGTCCAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CAA 90 bp CCAGCCACCTTCTCCCTTCATGGTTCTGAATGTCGGGGTGCTGCACATGTGTTGAAAAGCCTTTGTTACTaGCAGGCAGAGCCGAGGAGA +
Preference number: 5 (lower is better)
Translates to: PATFSLHGSECRGAAHVLKSLCY*QAEPRR
Trigger: TCTCCTCGGCTCTGCCTGCAAGTAACAAAGGCTTTT...CAACACATGTGCAGCACCCCGACATTCAGAACCATGAAGGGAGAAGGTGGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CAA 90 bp CTAGGTGTGGAAGATCCACCCTCAATGTTGGTGGGCAGCATTCAATCTGCTGAGGAGAGGTTCTGGAGCTaGAGGAAGAGCAGGGCCTTT +
Preference number: 5 (lower is better)
Translates to: LGVEDPPSMLVGSIQSAEERFWS*RKSRAF
Trigger: AAAGGCCCTGCTCTTCCTCAAGCTCCAGAACCTCTC...CTCAGCAGATTGAATGCTGCCCACCAACATTGAGGGTGGATCTTCCACACCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CAA 90 bp CTAGGTGTGGAAGATCCACCCTCAATGTTGGTGGGCAGCATTCAATCTGCTGAGACCTGCAGGCTGGACTaGATGAAGGTCTTTCCTCTC +
Preference number: 5 (lower is better)
Translates to: LGVEDPPSMLVGSIQSAETCRLD*MKVFPL
Trigger: GAGAGGAAAGACCTTCATCAAGTCCAGCCTGCAGGT...CTCAGCAGATTGAATGCTGCCCACCAACATTGAGGGTGGATCTTCCACACCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CAA 90 bp CCAGCCACCTTCTCCCTTCATGGTTCTGAATGTCGGGGTGCTGCACATGTGTTGTTGGGATTGCGTCTTTaGGGATTCACACACATCCCA +
Preference number: 5 (lower is better)
Translates to: PATFSLHGSECRGAAHVLLGLRL*GFTHIP
Trigger: TGGGATGTGTGTGAATCCCAAAAGACGCAATCCCAA...CAACACATGTGCAGCACCCCGACATTCAGAACCATGAAGGGAGAAGGTGGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CAA 90 bp TCCTGTGCTGCCTTCTTCTCGAGCCAGGACAGCACAACTCACGCTCCTCTTGGTTTGGATTCTCAACACTaGGGACTATGGCATTTGGGA +
Preference number: 5 (lower is better)
Translates to: SCAAFFSSQDSTTHAPLGLDSQH*GLWHLG
Trigger: TCCCAAATGCCATAGTCCCAAGTGTTGAGAATCCAA...ACCAAGAGGAGCGTGAGTTGTGCTGTCCTGGCTCGAGAAGAAGGCAGCACAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CAA 90 bp CCAGCCACCTTCTCCCTTCATGGTTCTGAATGTCGGGGTGCTGCACATGTGTTGTTTTCTTCCACTGCCTaGACATCAGAGCTTCAGGCT +
Preference number: 5 (lower is better)
Translates to: PATFSLHGSECRGAAHVLFSSTA*TSELQA
Trigger: AGCCTGAAGCTCTGATGTCAAGGCAGTGGAAGAAAA...CAACACATGTGCAGCACCCCGACATTCAGAACCATGAAGGGAGAAGGTGGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CAA 90 bp TGCCAAGTTGACAAGGGGTGGACCTGTGGACTTCATTTTGGGTGTGAACTCGACCCTGTGGACTTCATTTaGGGTGTGAACTCGACTGGG +
Preference number: 5 (lower is better)
Translates to: CQVDKGWTCGLHFGCELDPVDFI*GVNSTG
Trigger: CCCAGTCGAGTTCACACCCAAAATGAAGTCCACAGG...GTCGAGTTCACACCCAAAATGAAGTCCACAGGTCCACCCCTTGTCAACTTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CAA 90 bp AGCTGGTGGGTTCAGGCAAGGATGCCTCCACATGAACATGCTACCCTCTGCATGAGCGGAGGGAAATCATaGTTTGTAGGGGATGATTCG +
Preference number: 5 (lower is better)
Translates to: SWWVQARMPPHEHATLCMSGGKS*FVGDDS
Trigger: CGAATCATCCCCTACAAACAATGATTTCCCTCCGCT...CATGCAGAGGGTAGCATGTTCATGTGGAGGCATCCTTGCCTGAACCCACCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS CCA 90 bp CAGTCTTGTTTCTCCGAATGTGGAATAGGTTCCGAAAGCACTTCTTaGGCCTCTTCAGGGAAATCCTCTTCCTCGGGATGCTCTTGGCCA +
Preference number: 5 (lower is better)
Translates to: QSCFSECGIGSESTS*ASSGKSSSSGCSWP
Trigger: TGGCCAAGAGCATCCCGAGGAAGAGGATTTCCCTGAAGAGGCCCAAGAAGTGCTTTCGGAACCTATTCCACATTCGGAGAAACAAGACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321420.5
ENST00000423981.1
ENST00000458606.5
CDS-3UTR CAA 90 bp GCTGAGGCCCAGGGAGAACAAATAAAGAAGGCAAACTGGTCTCTCTCTCAGAGCTTCCGAAAGCACTTCTaGGGCCTCTTCAGGGAAATC +
Preference number: 5 (lower is better)
Translates to: AEAQGEQIKKANWSLSQSFRKHF*GLFREI
Trigger: GATTTCCCTGAAGAGGCCCAAGAAGTGCTTTCGGAA...GCTCTGAGAGAGAGACCAGTTTGCCTTCTTTATTTGTTCTCCCTGGGCCTCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CAA 90 bp TTGACACTTCATTCTTTCAACAAGGATTTACAGAGCGGCTACTCCCTCAGGTGCAGTAGCCCTCGTCACTaGTGGACACGGATTCGGGCT +
Preference number: 5 (lower is better)
Translates to: LTLHSFNKDLQSGYSLRCSSPRH*WTRIRA
Trigger: AGCCCGAATCCGTGTCCACAAGTGACGAGGGCTACT...GCACCTGAGGGAGTAGCCGCTCTGTAAATCCTTGTTGAAAGAATGAAGTGTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CAA 90 bp CTTGGGACTATGGCATTTGGGATTGCGTCTTTTGGGATTCACACACATCCCAGGTCCCAGGCAGACTCATaGGCTCTCTGCTTCCCATTT +
Preference number: 5 (lower is better)
Translates to: LGTMAFGIASFGIHTHPRSQADS*ALCFPF
Trigger: AAATGGGAAGCAGAGAGCCAATGAGTCTGCCTGGGA...CCTGGGATGTGTGTGAATCCCAAAAGACGCAATCCCAAATGCCATAGTCCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CAA 90 bp AGCTGGTGGGTTCAGGCAAGGATGCCTCCACATGAACATGCTACCCTCTGCATGCTATGGCATTTGGGATaGCGTCTTTTGGGATTCACA +
Preference number: 5 (lower is better)
Translates to: SWWVQARMPPHEHATLCMLWHLG*RLLGFT
Trigger: TGTGAATCCCAAAAGACGCAATCCCAAATGCCATAG...CATGCAGAGGGTAGCATGTTCATGTGGAGGCATCCTTGCCTGAACCCACCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CAA 90 bp GACAGCGTGGAGGGAGTGGAGTCAAAAGCCTTTGTTACTTGCAGGCAGAGCCGATTGGATTCTCAACACTaGGGACTATGGCATTTGGGA +
Preference number: 5 (lower is better)
Translates to: DSVEGVESKAFVTCRQSRLDSQH*GLWHLG
Trigger: TCCCAAATGCCATAGTCCCAAGTGTTGAGAATCCAA...TCGGCTCTGCCTGCAAGTAACAAAGGCTTTTGACTCCACTCCCTCCACGCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CAA 90 bp CTAGGTGTGGAAGATCCACCCTCAATGTTGGTGGGCAGCATTCAATCTGCTGAGGAGCTACTGCCTTGCTaGGGGCTTTATTTGGAGACT +
Preference number: 5 (lower is better)
Translates to: LGVEDPPSMLVGSIQSAEELLPC*GLYLET
Trigger: AGTCTCCAAATAAAGCCCCAAGCAAGGCAGTAGCTC...CTCAGCAGATTGAATGCTGCCCACCAACATTGAGGGTGGATCTTCCACACCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CAA 90 bp CTAGGTGTGGAAGATCCACCCTCAATGTTGGTGGGCAGCATTCAATCTGCTGAGGCCGAGGAGAATCCATaGGCTTCTTCCCAAAAAGCA +
Preference number: 5 (lower is better)
Translates to: LGVEDPPSMLVGSIQSAEAEENP*ASSQKA
Trigger: TGCTTTTTGGGAAGAAGCCAATGGATTCTCCTCGGC...CTCAGCAGATTGAATGCTGCCCACCAACATTGAGGGTGGATCTTCCACACCTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CAA 90 bp AGCTGGTGGGTTCAGGCAAGGATGCCTCCACATGAACATGCTACCCTCTGCATGACAACTGCATTGAGGTaGATGCAAGGATCAGGTAAG +
Preference number: 5 (lower is better)
Translates to: SWWVQARMPPHEHATLCMTTALR*MQGSGK
Trigger: CTTACCTGATCCTTGCATCAACCTCAATGCAGTTGT...CATGCAGAGGGTAGCATGTTCATGTGGAGGCATCCTTGCCTGAACCCACCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CAA 90 bp AAGGGATACCTAGAGACCTGGGAGATCATTATTCTGGGCATGTCTGTGAGGTGTGGTGGAGCTACTGCCTaGCTTGGGGCTTTATTTGGA +
Preference number: 5 (lower is better)
Translates to: KGYLETWEIIILGMSVRCGGATA*LGALFG
Trigger: TCCAAATAAAGCCCCAAGCAAGGCAGTAGCTCCACC...ACACCTCACAGACATGCCCAGAATAATGATCTCCCAGGTCTCTAGGTATCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CAA 90 bp CTAGGTGTGGAAGATCCACCCTCAATGTTGGTGGGCAGCATTCAATCTGCTGAGCTTCCCAAAAAGCATTaGGCCATCCATGGCTCTAGT +
Preference number: 5 (lower is better)
Translates to: LGVEDPPSMLVGSIQSAELPKKH*AIHGSS
Trigger: ACTAGAGCCATGGATGGCCAAATGCTTTTTGGGAAG...CTCAGCAGATTGAATGCTGCCCACCAACATTGAGGGTGGATCTTCCACACCTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CAA 90 bp CTTGGGACTATGGCATTTGGGATTGCGTCTTTTGGGATTCACACACATCCCAGGAAAAGCCTTTGTTACTaGCAGGCAGAGCCGAGGAGA +
Preference number: 5 (lower is better)
Translates to: LGTMAFGIASFGIHTHPRKSLCY*QAEPRR
Trigger: TCTCCTCGGCTCTGCCTGCAAGTAACAAAGGCTTTT...CCTGGGATGTGTGTGAATCCCAAAAGACGCAATCCCAAATGCCATAGTCCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS GCA 90 bp AACTGGGGCCTTATTTTTACCGGAAGTATCTGTTGTCGAAGTGGCTaGAGACTCCATAGAGGAGAACAAGCCTTCAGAGTGACCTCGTGT +
Preference number: 5 (lower is better)
Translates to: NWGLIFTGSICCRSG*RLHRGEQAFRVTSC
Trigger: ACACGAGGTCACTCTGAAGGCTTGTTCTCCTCTATGGAGTCTGCAGCCACTTCGACAACAGATACTTCCGGTAAAAATAAGGCCCCAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CAA 90 bp CTTGGGACTATGGCATTTGGGATTGCGTCTTTTGGGATTCACACACATCCCAGGGCCAAGTCCTCAGTCTaGTTTCTCCGAATGTGGAAT +
Preference number: 5 (lower is better)
Translates to: LGTMAFGIASFGIHTHPRAKSSV*FLRMWN
Trigger: ATTCCACATTCGGAGAAACAAGACTGAGGACTTGGC...CCTGGGATGTGTGTGAATCCCAAAAGACGCAATCCCAAATGCCATAGTCCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CAA 90 bp CTTGGGACTATGGCATTTGGGATTGCGTCTTTTGGGATTCACACACATCCCAGGTTTTCTTCCACTGCCTaGACATCAGAGCTTCAGGCT +
Preference number: 5 (lower is better)
Translates to: LGTMAFGIASFGIHTHPRFSSTA*TSELQA
Trigger: AGCCTGAAGCTCTGATGTCAAGGCAGTGGAAGAAAA...CCTGGGATGTGTGTGAATCCCAAAAGACGCAATCCCAAATGCCATAGTCCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CAA 90 bp CTTGGGACTATGGCATTTGGGATTGCGTCTTTTGGGATTCACACACATCCCAGGAGCGGAGGGAAATCATaGTTTGTAGGGGATGATTCG +
Preference number: 5 (lower is better)
Translates to: LGTMAFGIASFGIHTHPRSGGKS*FVGDDS
Trigger: CGAATCATCCCCTACAAACAATGATTTCCCTCCGCT...CCTGGGATGTGTGTGAATCCCAAAAGACGCAATCCCAAATGCCATAGTCCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CAA 90 bp AAGGGATACCTAGAGACCTGGGAGATCATTATTCTGGGCATGTCTGTGAGGTGTATGTGTTGTGACATTTaGGGGAGTGAGGTCCACAGC +
Preference number: 5 (lower is better)
Translates to: KGYLETWEIIILGMSVRCMCCDI*GSEVHS
Trigger: GCTGTGGACCTCACTCCCCAAAATGTCACAACACAT...ACACCTCACAGACATGCCCAGAATAATGATCTCCCAGGTCTCTAGGTATCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CAA 90 bp CTAGGTGTGGAAGATCCACCCTCAATGTTGGTGGGCAGCATTCAATCTGCTGAGACAACTGCATTGAGGTaGATGCAAGGATCAGGTAAG +
Preference number: 5 (lower is better)
Translates to: LGVEDPPSMLVGSIQSAETTALR*MQGSGK
Trigger: CTTACCTGATCCTTGCATCAACCTCAATGCAGTTGT...CTCAGCAGATTGAATGCTGCCCACCAACATTGAGGGTGGATCTTCCACACCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS-3UTR CAA 90 bp TTGACACTTCATTCTTTCAACAAGGATTTACAGAGCGGCTACTCCCTCAGGTGCTGGAGTCAAAAGCCTTaGTTACTTGCAGGCAGAGCC +
Preference number: 5 (lower is better)
Translates to: LTLHSFNKDLQSGYSLRCWSQKP*LLAGRA
Trigger: GGCTCTGCCTGCAAGTAACAAAGGCTTTTGACTCCA...GCACCTGAGGGAGTAGCCGCTCTGTAAATCCTTGTTGAAAGAATGAAGTGTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS GCA 72 bp GATCATGCGCCGGCTGCCCGGGGAGCCCGGGAAGCTTaGACTGCCCACCAGCTGCCCTGTGGCAGCCGTGGC +
Preference number: 6 (lower is better)
Translates to: DHAPAARGAREA*TAHQLPCGSRG
Trigger: GCCACGGCTGCCACAGGGCAGCTGGTGGGCAGTGCAAGCTTCCCGGGCTCCCCGGGCAGCCGGCGCATGATC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321420.5
ENST00000423981.1
ENST00000431758.1
ENST00000458606.5
CDS CAA 72 bp CGATCATGCGCCGGCTGCCCGGGGAGCCCGGGAAGCTaGCACTGCCCACCAGCTGCCCTGTGGCAGCCGTGG +
Preference number: 6 (lower is better)
Translates to: RSCAGCPGSPGS*HCPPAALWQPW
Trigger: CCACGGCTGCCACAGGGCAGCTGGTGGGCAGTGCAAGCTTCCCGGGCTCCCCGGGCAGCCGGCGCATGATCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321420.5
ENST00000423981.1
ENST00000431758.1
ENST00000458606.5
CDS GCA 72 bp CGAGGGCCTTGCTCTCTCCGGCGAGCAGGCCTGTGGTaGCCGGGTGTGCCCACAGCTCCTGCCTGCTGGGTG +
Preference number: 6 (lower is better)
Translates to: RGPCSLRRAGLW*PGVPTAPACWV
Trigger: CACCCAGCAGGCAGGAGCTGTGGGCACACCCGGGCACCACAGGCCTGCTCGCCGGAGAGAGCAAGGCCCTCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS CCA 72 bp GATGCATCGGCCAGGAGCTCGCTGTCCAACAGGTCCTaGCACAGGCCGTCCAGCCCCGGCCCCTCACCCGGG +
Preference number: 6 (lower is better)
Translates to: DASARSSLSNRS*HRPSSPGPSPG
Trigger: CCCGGGTGAGGGGCCGGGGCTGGACGGCCTGTGCCAGGACCTGTTGGACAGCGAGCTCCTGGCCGATGCATC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS CCA 72 bp CTCCGAGGGCCTTGCTCTCTCCGGCGAGCAGGCCTGTaGTGCCCGGGTGTGCCCACAGCTCCTGCCTGCTGG +
Preference number: 6 (lower is better)
Translates to: LRGPCSLRRAGL*CPGVPTAPACW
Trigger: CCAGCAGGCAGGAGCTGTGGGCACACCCGGGCACCACAGGCCTGCTCGCCGGAGAGAGCAAGGCCCTCGGAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS CCA 72 bp TCAGCCATGGCTGGCCCAGAGGCCCCCACTTCTGGCTaGCCACAGAGGAGGCCCTCACGGGCCAGGAGGCTG +
Preference number: 6 (lower is better)
Translates to: SAMAGPEAPTSG*PQRRPSRARRL
Trigger: CAGCCTCCTGGCCCGTGAGGGCCTCCTCTGTGGCCAGCCAGAAGTGGGGGCCTCTGGGCCAGCCATGGCTGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS GCA 72 bp GGGGCACAAAGTGGCGGTAGTCGATCATGCGCCGGCTaGCCGGGGAGCCCGGGAAGCTTGCACTGCCCACCA +
Preference number: 6 (lower is better)
Translates to: GAQSGGSRSCAG*PGSPGSLHCPP
Trigger: TGGTGGGCAGTGCAAGCTTCCCGGGCTCCCCGGGCAGCCGGCGCATGATCGACTACCGCCACTTTGTGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321420.5
ENST00000423981.1
ENST00000431758.1
ENST00000458606.5
CDS CCA 72 bp GCTGTGTCCAGCCGGGATTGGTCCCTGTCTGTCCCCTaGGGGCCTGAAAGCCACGGGCCTAGGAGGGCACGC +
Preference number: 6 (lower is better)
Translates to: AVSSRDWSLSVP*GPESHGPRRAR
Trigger: GCGTGCCCTCCTAGGCCCGTGGCTTTCAGGCCCCCAGGGGACAGACAGGGACCAATCCCGGCTGGACACAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS CCA 72 bp GCTGCTCGCTCTTGGGGGTGCCTGTGTCGATGGAGCTaGCTTTGGAGCCGCTGCGAGGGTCCCTGCAGGGGC +
Preference number: 6 (lower is better)
Translates to: AARSWGCLCRWS*LWSRCEGPCRG
Trigger: GCCCCTGCAGGGACCCTCGCAGCGGCTCCAAAGCCAGCTCCATCGACACAGGCACCCCCAAGAGCGAGCAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS CCA 72 bp AGCTGCAAGGGCTGGTCCTCCACAGAGGCCCAGGCCTaGACACCTAGCCCGGTGGGCTCCACCCTGAGCCAG +
Preference number: 6 (lower is better)
Translates to: SCKGWSSTEAQA*TPSPVGSTLSQ
Trigger: CTGGCTCAGGGTGGAGCCCACCGGGCTAGGTGTCCAGGCCTGGGCCTCTGTGGAGGACCAGCCCTTGCAGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS TCA 72 bp CCCAGGCCTGGACACCTAGCCCGGTGGGCTCCACCCTaGGCCAGCTCAGGTCCTGGACACGATCTCGACACC +
Preference number: 6 (lower is better)
Translates to: PRPGHLARWAPP*ASSGPGHDLDT
Trigger: GGTGTCGAGATCGTGTCCAGGACCTGAGCTGGCTCAGGGTGGAGCCCACCGGGCTAGGTGTCCAGGCCTGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS GCA 72 bp AGGGCATCTGGGGCACAAAGTGGCGGTAGTCGATCATaGGCCGGCTGCCCGGGGAGCCCGGGAAGCTTGCAC +
Preference number: 6 (lower is better)
Translates to: RASGAQSGGSRS*AGCPGSPGSLH
Trigger: GTGCAAGCTTCCCGGGCTCCCCGGGCAGCCGGCGCATGATCGACTACCGCCACTTTGTGCCCCAGATGCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321420.5
ENST00000423981.1
ENST00000431758.1
ENST00000458606.5
CDS CCA 72 bp ATTCGGGCTGCTCGCTCTTGGGGGTGCCTGTGTCGATaGAGCTGGCTTTGGAGCCGCTGCGAGGGTCCCTGC +
Preference number: 6 (lower is better)
Translates to: IRAARSWGCLCR*SWLWSRCEGPC
Trigger: GCAGGGACCCTCGCAGCGGCTCCAAAGCCAGCTCCATCGACACAGGCACCCCCAAGAGCGAGCAGCCCGAAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS CCA 72 bp GGTCATCATCTGGGCTGGGGCCAAGAGGACCCTCGCTaGGGTCGTGGAAGAGCTCGTAGAGGGCGTCCCCAC +
Preference number: 6 (lower is better)
Translates to: GHHLGWGQEDPR*GRGRARRGRPH
Trigger: GTGGGGACGCCCTCTACGAGCTCTTCCACGACCCCAGCGAGGGTCCTCTTGGCCCCAGCCCAGATGATGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS CCA 72 bp CCAAGTTCTCCTCGGCCCCCACTCGGAAGCTGCATATaGACAGTGGCGTCCCCAGGGCCGGCCCTGACAGAC +
Preference number: 6 (lower is better)
Translates to: PSSPRPPLGSCI*TVASPGPALTD
Trigger: GTCTGTCAGGGCCGGCCCTGGGGACGCCACTGTCCATATGCAGCTTCCGAGTGGGGGCCGAGGAGAACTTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS CAA 72 bp CTCTCGAGAGGCATCCCTGGACAGTGTGCCAGTCCCTaGTGTGGCCCCTCCGAGGGCCTTGCTCTCTCCGGC +
Preference number: 6 (lower is better)
Translates to: LSRGIPGQCASP*CGPSEGLALSG
Trigger: GCCGGAGAGAGCAAGGCCCTCGGAGGGGCCACACAAGGGACTGGCACACTGTCCAGGGATGCCTCTCGAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS CAA 90 bp TGTCTCTTCCTCTCGAGAGGCATCCCTGGACAGTGTGCCAGTCCCTaGTGTGGCCCCTCCGAGGGCCTTGCTCTCTCCGGCGAGCAGGCC +
Preference number: 6 (lower is better)
Translates to: CLFLSRGIPGQCASP*CGPSEGLALSGEQA
Trigger: GGCCTGCTCGCCGGAGAGAGCAAGGCCCTCGGAGGGGCCACACAAGGGACTGGCACACTGTCCAGGGATGCCTCTCGAGAGGAAGAGACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS TCA 72 bp CTCCCCACAACCCGTGAGCGAGTCGAAGCTCTGGAGTaGGGCCACGTCCTCACACAGGGCCCTGCAGAGACC +
Preference number: 6 (lower is better)
Translates to: LPTTRERVEALE*GHVLTQGPAET
Trigger: GGTCTCTGCAGGGCCCTGTGTGAGGACGTGGCCTCACTCCAGAGCTTCGACTCGCTCACGGGTTGTGGGGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS TCA 72 bp TTGGAGGCCATGCGGCCGGGGGCTGTTCGTTTGAGCTaGTCTTCAGGGCTGCCACACGGGCCACACAGCCTG +
Preference number: 6 (lower is better)
Translates to: LEAMRPGAVRLS*SSGLPHGPHSL
Trigger: CAGGCTGTGTGGCCCGTGTGGCAGCCCTGAAGATCAGCTCAAACGAACAGCCCCCGGCCGCATGGCCTCCAA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS GCA 72 bp TGCCACACGGGCCACACAGCCTGCCAGCATGGGCTCTaGATCCAGAGTGTCACCTCCGTGACCTGGCCTCCA +
Preference number: 6 (lower is better)
Translates to: CHTGHTACQHGL*IQSVTSVTWPP
Trigger: TGGAGGCCAGGTCACGGAGGTGACACTCTGGATGCAGAGCCCATGCTGGCAGGCTGTGTGGCCCGTGTGGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS CCA 72 bp AGAGGGCGTCCCCACTGTAGCTGTCCCGTGGGAAGGTaGCGGCAGGAGTGCCTGGGCTCTCAGCTTCCTTCT +
Preference number: 6 (lower is better)
Translates to: RGRPHCSCPVGR*RQECLGSQLPS
Trigger: AGAAGGAAGCTGAGAGCCCAGGCACTCCTGCCGCCACCTTCCCACGGGACAGCTACAGTGGGGACGCCCTCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS CCA 72 bp TCAGGGCTGCCACACGGGCCACACAGCCTGCCAGCATaGGCTCTGCATCCAGAGTGTCACCTCCGTGACCTG +
Preference number: 6 (lower is better)
Translates to: SGLPHGPHSLPA*ALHPECHLRDL
Trigger: CAGGTCACGGAGGTGACACTCTGGATGCAGAGCCCATGCTGGCAGGCTGTGTGGCCCGTGTGGCAGCCCTGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS TCA 72 bp TTGCCTTGGAGGCCATGCGGCCGGGGGCTGTTCGTTTaGGCTGATCTTCAGGGCTGCCACACGGGCCACACA +
Preference number: 6 (lower is better)
Translates to: LPWRPCGRGLFV*ADLQGCHTGHT
Trigger: TGTGTGGCCCGTGTGGCAGCCCTGAAGATCAGCTCAAACGAACAGCCCCCGGCCGCATGGCCTCCAAGGCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS GCA 72 bp TTGTGGACACGGATTCGGGCTGCTCGCTCTTGGGGGTaGCTGTGTCGATGGAGCTGGCTTTGGAGCCGCTGC +
Preference number: 6 (lower is better)
Translates to: LWTRIRAARSWG*LCRWSWLWSRC
Trigger: GCAGCGGCTCCAAAGCCAGCTCCATCGACACAGGCACCCCCAAGAGCGAGCAGCCCGAATCCGTGTCCACAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS CCA 72 bp GGTTGGGCTCTCCGGGCCCTCGTTCAGCTCCAGAGATaGCACCGAGCTCTCATCTGCGAACACCTCCCCACA +
Preference number: 6 (lower is better)
Translates to: GWALRALVQLQR*HRALICEHLPT
Trigger: TGTGGGGAGGTGTTCGCAGATGAGAGCTCGGTGCCATCTCTGGAGCTGAACGAGGGCCCGGAGAGCCCAACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS TCA 72 bp CCGAGCTCTCATCTGCGAACACCTCCCCACAACCCGTaGGCGAGTCGAAGCTCTGGAGTGAGGCCACGTCCT +
Preference number: 6 (lower is better)
Translates to: PSSHLRTPPHNP*ASRSSGVRPRP
Trigger: AGGACGTGGCCTCACTCCAGAGCTTCGACTCGCTCACGGGTTGTGGGGAGGTGTTCGCAGATGAGAGCTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS TCA 72 bp CCTGAAAGCCACGGGCCTAGGAGGGCACGCTGCTGCTaGCGCACTGAGCGATTCACACTGTCCCAGAACCTG +
Preference number: 6 (lower is better)
Translates to: PESHGPRRARCC*RTERFTLSQNL
Trigger: CAGGTTCTGGGACAGTGTGAATCGCTCAGTGCGTCAGCAGCAGCGTGCCCTCCTAGGCCCGTGGCTTTCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS TCA 72 bp GCTGCATATGGACAGTGGCGTCCCCAGGGCCGGCCCTaGCAGACTCTCAGACACGCACAGGTCATCATCTGG +
Preference number: 6 (lower is better)
Translates to: AAYGQWRPQGRP*QTLRHAQVIIW
Trigger: CCAGATGATGACCTGTGCGTGTCTGAGAGTCTGTCAGGGCCGGCCCTGGGGACGCCACTGTCCATATGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS CCA 72 bp CGTCACTTGTGGACACGGATTCGGGCTGCTCGCTCTTaGGGGTGCCTGTGTCGATGGAGCTGGCTTTGGAGC +
Preference number: 6 (lower is better)
Translates to: RHLWTRIRAARS*GCLCRWSWLWS
Trigger: GCTCCAAAGCCAGCTCCATCGACACAGGCACCCCCAAGAGCGAGCAGCCCGAATCCGTGTCCACAAGTGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS CCA 72 bp GTAGCTGTCCCGTGGGAAGGTGGCGGCAGGAGTGCCTaGGCTCTCAGCTTCCTTCTTGTCCTCCTCAAGTCC +
Preference number: 6 (lower is better)
Translates to: VAVPWEGGGRSA*ALSFLLVLLKS
Trigger: GGACTTGAGGAGGACAAGAAGGAAGCTGAGAGCCCAGGCACTCCTGCCGCCACCTTCCCACGGGACAGCTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS CCA 72 bp GTAGGCCATGGATGGTGGTCATGCTGGGGGAGCTGCTaGACTGTTTCTGCTCCAGCATGTCAGGGCCCCTGG +
Preference number: 6 (lower is better)
Translates to: VGHGWWSCWGSC*TVSAPACQGPW
Trigger: CCAGGGGCCCTGACATGCTGGAGCAGAAACAGTCCAGCAGCTCCCCCAGCATGACCACCATCCATGGCCTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS GCA 72 bp CAGTGCCCCAGCTGTGTGTGGGGTCTACTGGTGCTGTaGTCTGCCGCAGTCTTGAGGGAGGAGCAGAAATGC +
Preference number: 6 (lower is better)
Translates to: QCPSCVWGLLVL*SAAVLREEQKC
Trigger: GCATTTCTGCTCCTCCCTCAAGACTGCGGCAGAGCACAGCACCAGTAGACCCCACACACAGCTGGGGCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321420.5
CDS CCA 72 bp ACAGACTCTCAGACACGCACAGGTCATCATCTGGGCTaGGGCCAAGAGGACCCTCGCTGGGGTCGTGGAAGA +
Preference number: 6 (lower is better)
Translates to: TDSQTRTGHHLG*GQEDPRWGRGR
Trigger: TCTTCCACGACCCCAGCGAGGGTCCTCTTGGCCCCAGCCCAGATGATGACCTGTGCGTGTCTGAGAGTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS CCA 72 bp AGTGACCTCGTGTCTCTTCCTCTCGAGAGGCATCCCTaGACAGTGTGCCAGTCCCTTGTGTGGCCCCTCCGA +
Preference number: 6 (lower is better)
Translates to: SDLVSLPLERHP*TVCQSLVWPLR
Trigger: TCGGAGGGGCCACACAAGGGACTGGCACACTGTCCAGGGATGCCTCTCGAGAGGAAGAGACACGAGGTCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS CAA 72 bp TCGTCACTTGTGGACACGGATTCGGGCTGCTCGCTCTaGGGGGTGCCTGTGTCGATGGAGCTGGCTTTGGAG +
Preference number: 6 (lower is better)
Translates to: SSLVDTDSGCSL*GVPVSMELALE
Trigger: CTCCAAAGCCAGCTCCATCGACACAGGCACCCCCAAGAGCGAGCAGCCCGAATCCGTGTCCACAAGTGACGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS TCA 72 bp AGCAGAAATGCTGTGGGGACTCTGTCTCCGCAGAACTaGGGACGAGGGGTCTGCACGCGTGGTTCAGTGCCT +
Preference number: 6 (lower is better)
Translates to: SRNAVGTLSPQN*GRGVCTRGSVP
Trigger: AGGCACTGAACCACGCGTGCAGACCCCTCGTCCTCAGTTCTGCGGAGACAGAGTCCCCACAGCATTTCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321420.5
CDS TCA 72 bp ACATGCTGTCGTGAGTCTTGCACTTTCGCACCGGTTTaGAGGTGGCTCCACAGAGGGCTGCGGGTCCCCCTT +
Preference number: 6 (lower is better)
Translates to: TCCRESCTFAPV*RWLHRGLRVPL
Trigger: AAGGGGGACCCGCAGCCCTCTGTGGAGCCACCTTCAAACCGGTGCGAAAGTGCAAGACTCACGACAGCATGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321420.5
ENST00000423981.1
ENST00000431758.1
ENST00000458606.5
CDS TCA 72 bp GACGCACTGAGCGATTCACACTGTCCCAGAACCTGGTaGAGTCAGAGGCTTCATTCTGGGCGGGCGAGGCCA +
Preference number: 6 (lower is better)
Translates to: DALSDSHCPRTW*SQRLHSGRARP
Trigger: TGGCCTCGCCCGCCCAGAATGAAGCCTCTGACTTCACCAGGTTCTGGGACAGTGTGAATCGCTCAGTGCGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS GCA 72 bp GGTCCTGGACACGATCTCGACACCTCTGGTCCTGTGTaGTGGCTGAGTAGGGTAGGCCATGGATGGTGGTCA +
Preference number: 6 (lower is better)
Translates to: GPGHDLDTSGPV*WLSRVGHGWWS
Trigger: TGACCACCATCCATGGCCTACCCTACTCAGCCAGCACACAGGACCAGAGGTGTCGAGATCGTGTCCAGGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS CCA 72 bp CTGGCGAGAAGGAATCATAGTAGCCCTCGTCACTTGTaGACACGGATTCGGGCTGCTCGCTCTTGGGGGTGC +
Preference number: 6 (lower is better)
Translates to: LARRNHSSPRHL*TRIRAARSWGC
Trigger: GCACCCCCAAGAGCGAGCAGCCCGAATCCGTGTCCACAAGTGACGAGGGCTACTATGATTCCTTCTCGCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS CCA 72 bp CCTGTGTGCTGGCTGAGTAGGGTAGGCCATGGATGGTaGTCATGCTGGGGGAGCTGCTGGACTGTTTCTGCT +
Preference number: 6 (lower is better)
Translates to: PVCWLSRVGHGW*SCWGSCWTVSA
Trigger: AGCAGAAACAGTCCAGCAGCTCCCCCAGCATGACCACCATCCATGGCCTACCCTACTCAGCCAGCACACAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS CCA 72 bp CCTGGACACGATCTCGACACCTCTGGTCCTGTGTGCTaGCTGAGTAGGGTAGGCCATGGATGGTGGTCATGC +
Preference number: 6 (lower is better)
Translates to: PGHDLDTSGPVC*LSRVGHGWWSC
Trigger: GCATGACCACCATCCATGGCCTACCCTACTCAGCCAGCACACAGGACCAGAGGTGTCGAGATCGTGTCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS CAA 90 bp GCTGCTGGGTCTGGGGGTTTCTCGTGGGAAACCTGCAGGCTGGACTaGATGAAGGTCTTTCCTCTCTTCAGCTCCATGCTGCCAGTGCCC +
Preference number: 6 (lower is better)
Translates to: AAGSGGFSWETCRLD*MKVFPLFSSMLPVP
Trigger: GGGCACTGGCAGCATGGAGCTGAAGAGAGGAAAGACCTTCATCAAGTCCAGCCTGCAGGTTTCCCACGAGAAACCCCCAGACCCAGCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321420.5
ENST00000423981.1
ENST00000431758.1
ENST00000458606.5
CDS CAA 90 bp GGCAGGCTTTTCCCCTCGGCCGCCAGCGAGGCCAAGTCCTCAGTCTaGTTTCTCCGAATGTGGAATAGGTTCCGAAAGCACTTCTTGGGC +
Preference number: 6 (lower is better)
Translates to: GRLFPSAASEAKSSV*FLRMWNRFRKHFLG
Trigger: GCCCAAGAAGTGCTTTCGGAACCTATTCCACATTCGGAGAAACAAGACTGAGGACTTGGCCTCGCTGGCGGCCGAGGGGAAAAGCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS CAA 72 bp TTCCCCTCGGCCGCCAGCGAGGCCAAGTCCTCAGTCTaGTTTCTCCGAATGTGGAATAGGTTCCGAAAGCAC +
Preference number: 6 (lower is better)
Translates to: FPSAASEAKSSV*FLRMWNRFRKH
Trigger: GTGCTTTCGGAACCTATTCCACATTCGGAGAAACAAGACTGAGGACTTGGCCTCGCTGGCGGCCGAGGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS TCA 72 bp GCTGCAGACTCCATAGAGGAGAACAAGCCTTCAGAGTaGCCTCGTGTCTCTTCCTCTCGAGAGGCATCCCTG +
Preference number: 6 (lower is better)
Translates to: AADSIEENKPSE*PRVSSSREASL
Trigger: CAGGGATGCCTCTCGAGAGGAAGAGACACGAGGTCACTCTGAAGGCTTGTTCTCCTCTATGGAGTCTGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS TCA 72 bp AGTGGTCATGAAGACACATGCAGTTCCTGGTGCATGTaGGCCTGTCCTACAGATGGGGCTCAGCCATGGCTG +
Preference number: 6 (lower is better)
Translates to: SGHEDTCSSWCM*ACPTDGAQPWL
Trigger: CAGCCATGGCTGAGCCCCATCTGTAGGACAGGCTCACATGCACCAGGAACTGCATGTGTCTTCATGACCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS CAA 72 bp TCTGGGGGTTTCTCGTGGGAAACCTGCAGGCTGGACTaGATGAAGGTCTTTCCTCTCTTCAGCTCCATGCTG +
Preference number: 6 (lower is better)
Translates to: SGGFSWETCRLD*MKVFPLFSSML
Trigger: CAGCATGGAGCTGAAGAGAGGAAAGACCTTCATCAAGTCCAGCCTGCAGGTTTCCCACGAGAAACCCCCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321420.5
ENST00000423981.1
ENST00000431758.1
ENST00000458606.5
CDS CCA 72 bp TGGGCTCTCAGCTTCCTTCTTGTCCTCCTCAAGTCCTaGCGAGAAGGAATCATAGTAGCCCTCGTCACTTGT +
Preference number: 6 (lower is better)
Translates to: WALSFLLVLLKS*REGIIVALVTC
Trigger: ACAAGTGACGAGGGCTACTATGATTCCTTCTCGCCAGGACTTGAGGAGGACAAGAAGGAAGCTGAGAGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1
CDS CAA 90 bp TCAGTCTTGTTTCTCCGAATGTGGAATAGGTTCCGAAAGCACTTCTaGGGCCTCTTCAGGGAAATCCTCTTCCTCGGGATGCTCTTGGCC +
Preference number: 6 (lower is better)
Translates to: SVLFLRMWNRFRKHF*GLFREILFLGMLLA
Trigger: GGCCAAGAGCATCCCGAGGAAGAGGATTTCCCTGAAGAGGCCCAAGAAGTGCTTTCGGAACCTATTCCACATTCGGAGAAACAAGACTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321420.5
ENST00000423981.1
ENST00000458606.5
CDS CCA 72 bp AGCGAGGCCAAGTCCTCAGTCTTGTTTCTCCGAATGTaGAATAGGTTCCGAAAGCACTTCTTGGGCCTCTTC +
Preference number: 6 (lower is better)
Translates to: SEAKSSVLFLRM*NRFRKHFLGLF
Trigger: GAAGAGGCCCAAGAAGTGCTTTCGGAACCTATTCCACATTCGGAGAAACAAGACTGAGGACTTGGCCTCGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321420.5
ENST00000423981.1
ENST00000458606.5
CDS CAA 72 bp TTTCTCCGAATGTGGAATAGGTTCCGAAAGCACTTCTaGGGCCTCTTCAGGGAAATCCTCTTCCTCGGGATG +
Preference number: 6 (lower is better)
Translates to: FLRMWNRFRKHF*GLFREILFLGM
Trigger: CATCCCGAGGAAGAGGATTTCCCTGAAGAGGCCCAAGAAGTGCTTTCGGAACCTATTCCACATTCGGAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321420.5
ENST00000423981.1
ENST00000458606.5
CDS GCA 72 bp CTTATTTTTACCGGAAGTATCTGTTGTCGAAGTGGCTaGAGACTCCATAGAGGAGAACAAGCCTTCAGAGTG +
Preference number: 6 (lower is better)
Translates to: LIFTGSICCRSG*RLHRGEQAFRV
Trigger: CACTCTGAAGGCTTGTTCTCCTCTATGGAGTCTGCAGCCACTTCGACAACAGATACTTCCGGTAAAAATAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321420.5
ENST00000423981.1