RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AMER2 (Homo sapiens)

Ensembl gene IDs: ENSG00000165566

Ensembl transcript IDs: ENST00000357816.2, ENST00000515384.2

Found 574 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGAAACCCCCGTGTAGCATCCCTCTTTCTGGTGTTATCCGGTCCCTaGTCAGGGCACAAAGACCTCCTCGGTCCACGCTCTGGAGCAGGG +
Preference number: 1 (lower is better)
Translates to: RNPRVASLFLVLSGP*SGHKDLLGPRSGAG
Trigger: CCCTGCTCCAGAGCGTGGACCGAGGAGGTCTTTGTGCCCTGAGCAGGGACCGGATAACACCAGAAAGAGGGATGCTACACGGGGGTTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR CCA 90 bp ATCCGGTCCCTGCTCAGGGCACAAAGACCTCCTCGGTCCACGCTCTaGAGCAGGGCGGGGGACGGGTGGTGTCCTAAAAGACTTTCTTTA +
Preference number: 1 (lower is better)
Translates to: IRSLLRAQRPPRSTL*SRAGDGWCPKRLSL
Trigger: TAAAGAAAGTCTTTTAGGACACCACCCGTCCCCCGCCCTGCTCCAGAGCGTGGACCGAGGAGGTCTTTGTGCCCTGAGCAGGGACCGGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR CCA 90 bp AGATCTCCTCTGGTTCTTCAGCGGTTCCTTCAGGCCTCTAGACACTaGCTTATCCCAATATCCAGGCATGACTCTTACTTAGGTTTGGCT +
Preference number: 1 (lower is better)
Translates to: RSPLVLQRFLQASRH*LIPISRHDSYLGLA
Trigger: AGCCAAACCTAAGTAAGAGTCATGCCTGGATATTGGGATAAGCCAGTGTCTAGAGGCCTGAAGGAACCGCTGAAGAACCAGAGGAGATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR CCA 90 bp CGTCACTGCTGTCTGAGGGCACTTAGGAGACATGAGCTGCCTGAGTaGATCTCTTCACACCAAGCTAACAGTCAAGAGTTGCCTTTAAAA +
Preference number: 1 (lower is better)
Translates to: RHCCLRALRRHELPE*ISSHQANSQELPLK
Trigger: TTTTAAAGGCAACTCTTGACTGTTAGCTTGGTGTGAAGAGATCCACTCAGGCAGCTCATGTCTCCTAAGTGCCCTCAGACAGCAGTGACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR TCA 90 bp GCCATAAGCAACAACATGGCTAAACTTGGGGGTCGTTATGCTCAATaGAATAAGCCAGTCACAGAAGGACAAATACTGCGCGTTTCCACT +
Preference number: 1 (lower is better)
Translates to: AISNNMAKLGGRYAQ*NKPVTEGQILRVST
Trigger: AGTGGAAACGCGCAGTATTTGTCCTTCTGTGACTGGCTTATTTCATTGAGCATAACGACCCCCAAGTTTAGCCATGTTGTTGCTTATGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR TCA 90 bp GCACAAGAAAGCAACTATGATCCCTTTTCTATGGTTGGAAAAAGTTaGGAATCTACTCTTCCTGCCACTCCAGGGATTTCCCATCAAGTG +
Preference number: 1 (lower is better)
Translates to: AQESNYDPFSMVGKS*ESTLPATPGISHQV
Trigger: CACTTGATGGGAAATCCCTGGAGTGGCAGGAAGAGTAGATTCTCAACTTTTTCCAACCATAGAAAAGGGATCATAGTTGCTTTCTTGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR CCA 90 bp TCAGAATCGCTTCCCATTACAGTACATAACAGAACATCAATGGTTTaGGGACCATCATCATGTCTAGCTATAAGACCAGATTTTATATTC +
Preference number: 1 (lower is better)
Translates to: SESLPITVHNRTSMV*GPSSCLAIRPDFIF
Trigger: GAATATAAAATCTGGTCTTATAGCTAGACATGATGATGGTCCCCAAACCATTGATGTTCTGTTATGTACTGTAATGGGAAGCGATTCTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR TCA 90 bp TTGTGCAGAGCTATTAAACCAACCGATAAATTTTCGCCCAACAATTaGTTTGACTTTTTCCTGTCTAATTTGGGCAGCCTTTCAACTAAA +
Preference number: 1 (lower is better)
Translates to: LCRAIKPTDKFSPNN*FDFFLSNLGSLSTK
Trigger: TTTAGTTGAAAGGCTGCCCAAATTAGACAGGAAAAAGTCAAATCAATTGTTGGGCGAAAATTTATCGGTTGGTTTAATAGCTCTGCACAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR GCA 90 bp CAACATAACTTTGCCATGGATTCATGCAAAGGAGAATATAACCCTTaGAGGAAAATGTACAACAAGGAAATCAAGATCCTTTGTTTTACA +
Preference number: 1 (lower is better)
Translates to: QHNFAMDSCKGEYNP*RKMYNKEIKILCFT
Trigger: TGTAAAACAAAGGATCTTGATTTCCTTGTTGTACATTTTCCTGCAAGGGTTATATTCTCCTTTGCATGAATCCATGGCAAAGTTATGTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR GCA 90 bp TGTACAATTGAACAAATGAACCAACATAACTTTGCCATGGATTCATaGAAAGGAGAATATAACCCTTGCAGGAAAATGTACAACAAGGAA +
Preference number: 1 (lower is better)
Translates to: CTIEQMNQHNFAMDS*KGEYNPCRKMYNKE
Trigger: TTCCTTGTTGTACATTTTCCTGCAAGGGTTATATTCTCCTTTGCATGAATCCATGGCAAAGTTATGTTGGTTCATTTGTTCAATTGTACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR-3UTR CCA 90 bp GCTAATGGCAGGATAAACGCATCAACCACCATCTGTACTAAAGCAGAGTGTTTCCCTCGGTCCACGCTCTaGAGCAGGGCGGGGGACGGG +
Preference number: 2 (lower is better)
Translates to: ANGRINASTTICTKAECFPRSTL*SRAGDG
Trigger: CCCGTCCCCCGCCCTGCTCCAGAGCGTGGACCGAGG...GAAACACTCTGCTTTAGTACAGATGGTGGTTGATGCGTTTATCCTGCCATTAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR-3UTR CCA 90 bp TTCCCATTACAGTACATAACAGAACATCAATGGTTTGGGGACCATCATCATGTCCCTCGGTCCACGCTCTaGAGCAGGGCGGGGGACGGG +
Preference number: 2 (lower is better)
Translates to: FPLQYITEHQWFGDHHHVPRSTL*SRAGDG
Trigger: CCCGTCCCCCGCCCTGCTCCAGAGCGTGGACCGAGG...GACATGATGATGGTCCCCAAACCATTGATGTTCTGTTATGTACTGTAATGGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR-3UTR CCA 90 bp GACTCTTACCCAAAACAAGGCAGAGCCATTCCTCTGGGACACCAGCACAATAGAAGGGCGGGGGACGGGTaGTGTCCTAAAAGACTTTCT +
Preference number: 2 (lower is better)
Translates to: DSYPKQGRAIPLGHQHNRRAGDG*CPKRLS
Trigger: AGAAAGTCTTTTAGGACACCACCCGTCCCCCGCCCT...TCTATTGTGCTGGTGTCCCAGAGGAATGGCTCTGCCTTGTTTTGGGTAAGAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR-3UTR TCA 90 bp TTAACAATGAAGGGGAGCAAAGCATACGTGAATGTACTGGAACAGGTCTCAGCACCCGTCACTGCTGTCTaGGGGCACTTAGGAGACATG +
Preference number: 2 (lower is better)
Translates to: LTMKGSKAYVNVLEQVSAPVTAV*GHLGDM
Trigger: CATGTCTCCTAAGTGCCCTCAGACAGCAGTGACGGG...TGCTGAGACCTGTTCCAGTACATTCACGTATGCTTTGCTCCCCTTCATTGTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR-3UTR GCA 90 bp GACTCTTACCCAAAACAAGGCAGAGCCATTCCTCTGGGACACCAGCACAATAGACGTAGGGAAGTTTTCTaGCAATCAGTGGTCCCCTCT +
Preference number: 2 (lower is better)
Translates to: DSYPKQGRAIPLGHQHNRRREVF*QSVVPS
Trigger: AGAGGGGACCACTGATTGGCAGAAAACTTCCCTACG...TCTATTGTGCTGGTGTCCCAGAGGAATGGCTCTGCCTTGTTTTGGGTAAGAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR-3UTR CCA 90 bp TTAACAATGAAGGGGAGCAAAGCATACGTGAATGTACTGGAACAGGTCTCAGCATTGTATTCCTTGGCATaGGGCCCATCCACCTTGGCC +
Preference number: 2 (lower is better)
Translates to: LTMKGSKAYVNVLEQVSALYSLA*GPSTLA
Trigger: GGCCAAGGTGGATGGGCCCCATGCCAAGGAATACAA...TGCTGAGACCTGTTCCAGTACATTCACGTATGCTTTGCTCCCCTTCATTGTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR-3UTR CCA 90 bp GACTCTTACCCAAAACAAGGCAGAGCCATTCCTCTGGGACACCAGCACAATAGAAAAAGTTGTATTCCTTaGCATGGGGCCCATCCACCT +
Preference number: 2 (lower is better)
Translates to: DSYPKQGRAIPLGHQHNRKSCIP*HGAHPP
Trigger: AGGTGGATGGGCCCCATGCCAAGGAATACAACTTTT...TCTATTGTGCTGGTGTCCCAGAGGAATGGCTCTGCCTTGTTTTGGGTAAGAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR-3UTR TCA 90 bp GCTAATGGCAGGATAAACGCATCAACCACCATCTGTACTAAAGCAGAGTGTTTCCTCAGGGACTTATCTTaGGAGGAGAAACCCCCGTGT +
Preference number: 2 (lower is better)
Translates to: ANGRINASTTICTKAECFLRDLS*EEKPPC
Trigger: ACACGGGGGTTTCTCCTCTCAAGATAAGTCCCTGAG...GAAACACTCTGCTTTAGTACAGATGGTGGTTGATGCGTTTATCCTGCCATTAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR-3UTR GCA 90 bp CAAACACAGATAACAAGTTGGCAAAGATGTGGAGAAATTGGAACCCTTGTGCACGTGTTATCCGGTCCCTaGTCAGGGCACAAAGACCTC +
Preference number: 2 (lower is better)
Translates to: QTQITSWQRCGEIGTLVHVLSGP*SGHKDL
Trigger: GAGGTCTTTGTGCCCTGAGCAGGGACCGGATAACAC...GTGCACAAGGGTTCCAATTTCTCCACATCTTTGCCAACTTGTTATCTGTGTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR-3UTR GCA 90 bp CAAACACAGATAACAAGTTGGCAAAGATGTGGAGAAATTGGAACCCTTGTGCACGAAGTGTCCCGTCACTaGTGTCTGAGGGCACTTAGG +
Preference number: 2 (lower is better)
Translates to: QTQITSWQRCGEIGTLVHEVSRH*CLRALR
Trigger: CCTAAGTGCCCTCAGACAGCAGTGACGGGACACTTC...GTGCACAAGGGTTCCAATTTCTCCACATCTTTGCCAACTTGTTATCTGTGTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR-3UTR GCA 90 bp TTAACAATGAAGGGGAGCAAAGCATACGTGAATGTACTGGAACAGGTCTCAGCACCTGATCCTGATTTCTaGACTGGGTGGGGGAAGAAA +
Preference number: 2 (lower is better)
Translates to: LTMKGSKAYVNVLEQVSAPDPDF*TGWGKK
Trigger: TTTCTTCCCCCACCCAGTGCAGAAATCAGGATCAGG...TGCTGAGACCTGTTCCAGTACATTCACGTATGCTTTGCTCCCCTTCATTGTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR-3UTR GCA 90 bp CAAACACAGATAACAAGTTGGCAAAGATGTGGAGAAATTGGAACCCTTGTGCACGAATGCATTCCGCCATaGGGACAGAGCCAACATGCT +
Preference number: 2 (lower is better)
Translates to: QTQITSWQRCGEIGTLVHECIPP*GQSQHA
Trigger: AGCATGTTGGCTCTGTCCGCATGGCGGAATGCATTC...GTGCACAAGGGTTCCAATTTCTCCACATCTTTGCCAACTTGTTATCTGTGTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR-3UTR GCA 90 bp CAAACACAGATAACAAGTTGGCAAAGATGTGGAGAAATTGGAACCCTTGTGCACTTCTTTTCCTTGCTCTaGCTGGAGGAGGGGAAAGGG +
Preference number: 2 (lower is better)
Translates to: QTQITSWQRCGEIGTLVHFFSLL*LEEGKG
Trigger: CCCTTTCCCCTCCTCCAGGCAGAGCAAGGAAAAGAA...GTGCACAAGGGTTCCAATTTCTCCACATCTTTGCCAACTTGTTATCTGTGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR-3UTR CCA 90 bp GCTAATGGCAGGATAAACGCATCAACCACCATCTGTACTAAAGCAGAGTGTTTCTTTTCTGCCAATCAGTaGTCCCCTCTGCTCATCAGG +
Preference number: 2 (lower is better)
Translates to: ANGRINASTTICTKAECFFSANQ*SPLLIR
Trigger: CCTGATGAGCAGAGGGGACCACTGATTGGCAGAAAA...GAAACACTCTGCTTTAGTACAGATGGTGGTTGATGCGTTTATCCTGCCATTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR-3UTR GCA 90 bp CAGTGTATGTGTAATATAGACATTCAAGTCAGGCTGTCTTTGTGCAGAGCTATTGTGTTATCCGGTCCCTaGTCAGGGCACAAAGACCTC +
Preference number: 2 (lower is better)
Translates to: QCMCNIDIQVRLSLCRAIVLSGP*SGHKDL
Trigger: GAGGTCTTTGTGCCCTGAGCAGGGACCGGATAACAC...AATAGCTCTGCACAAAGACAGCCTGACTTGAATGTCTATATTACACATACACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR-3UTR GCA 90 bp GCTAATGGCAGGATAAACGCATCAACCACCATCTGTACTAAAGCAGAGTGTTTCATCAGTGGTCCCCTCTaGTCATCAGGTAAATACCTG +
Preference number: 2 (lower is better)
Translates to: ANGRINASTTICTKAECFISGPL*SSGKYL
Trigger: CAGGTATTTACCTGATGAGCAGAGGGGACCACTGAT...GAAACACTCTGCTTTAGTACAGATGGTGGTTGATGCGTTTATCCTGCCATTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR-3UTR CCA 90 bp CAAACACAGATAACAAGTTGGCAAAGATGTGGAGAAATTGGAACCCTTGTGCACCAGGCCTCTAGACACTaGCTTATCCCAATATCCAGG +
Preference number: 2 (lower is better)
Translates to: QTQITSWQRCGEIGTLVHQASRH*LIPISR
Trigger: CCTGGATATTGGGATAAGCCAGTGTCTAGAGGCCTG...GTGCACAAGGGTTCCAATTTCTCCACATCTTTGCCAACTTGTTATCTGTGTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR-3UTR TCA 90 bp CAAACACAGATAACAAGTTGGCAAAGATGTGGAGAAATTGGAACCCTTGTGCACAAACAGGGTTTGGGGTaGGAAACAGACTCTTACCCA +
Preference number: 2 (lower is better)
Translates to: QTQITSWQRCGEIGTLVHKQGLG*ETDSYP
Trigger: TGGGTAAGAGTCTGTTTCTCACCCCAAACCCTGTTT...GTGCACAAGGGTTCCAATTTCTCCACATCTTTGCCAACTTGTTATCTGTGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR-3UTR GCA 90 bp CAAACACAGATAACAAGTTGGCAAAGATGTGGAGAAATTGGAACCCTTGTGCACATCAGTGGTCCCCTCTaGTCATCAGGTAAATACCTG +
Preference number: 2 (lower is better)
Translates to: QTQITSWQRCGEIGTLVHISGPL*SSGKYL
Trigger: CAGGTATTTACCTGATGAGCAGAGGGGACCACTGAT...GTGCACAAGGGTTCCAATTTCTCCACATCTTTGCCAACTTGTTATCTGTGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR-3UTR GCA 90 bp TTAACAATGAAGGGGAGCAAAGCATACGTGAATGTACTGGAACAGGTCTCAGCAGTCAGGCTGTCTTTGTaGAGAGCTATTAAACCAACC +
Preference number: 2 (lower is better)
Translates to: LTMKGSKAYVNVLEQVSAVRLSL*RAIKPT
Trigger: GGTTGGTTTAATAGCTCTGCACAAAGACAGCCTGAC...TGCTGAGACCTGTTCCAGTACATTCACGTATGCTTTGCTCCCCTTCATTGTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR-3UTR CCA 90 bp TGGCACAAGAAAGCAACTATGATCCCTTTTCTATGGTTGGAAAAAGTTGAGAATTTGTATTCCTTGGCATaGGGCCCATCCACCTTGGCC +
Preference number: 2 (lower is better)
Translates to: WHKKATMIPFLWLEKVENLYSLA*GPSTLA
Trigger: GGCCAAGGTGGATGGGCCCCATGCCAAGGAATACAA...ATTCTCAACTTTTTCCAACCATAGAAAAGGGATCATAGTTGCTTTCTTGTGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR-3UTR CCA 90 bp TTAACAATGAAGGGGAGCAAAGCATACGTGAATGTACTGGAACAGGTCTCAGCACATCAGGTAAATACCTaGCTCTTTCAGCTTTGGAGG +
Preference number: 2 (lower is better)
Translates to: LTMKGSKAYVNVLEQVSAHQVNT*LFQLWR
Trigger: CCTCCAAAGCTGAAAGAGCCAGGTATTTACCTGATG...TGCTGAGACCTGTTCCAGTACATTCACGTATGCTTTGCTCCCCTTCATTGTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR CAA 90 bp AGACACTGGCTTATCCCAATATCCAGGCATGACTCTTACTTAGGTTaGGCTAAGTTCTGTTTTCTGCAAAGGCAAGTAAAGGTGACTTCC +
Preference number: 2 (lower is better)
Translates to: RHWLIPISRHDSYLG*AKFCFLQRQVKVTS
Trigger: GGAAGTCACCTTTACTTGCCTTTGCAGAAAACAGAACTTAGCCAAACCTAAGTAAGAGTCATGCCTGGATATTGGGATAAGCCAGTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR CAA 90 bp AGTAGCCCTTGGCACAAGAAAGCAACTATGATCCCTTTTCTATGGTaGGAAAAAGTTGAGAATCTACTCTTCCTGCCACTCCAGGGATTT +
Preference number: 2 (lower is better)
Translates to: SSPWHKKATMIPFLW*EKVENLLFLPLQGF
Trigger: AAATCCCTGGAGTGGCAGGAAGAGTAGATTCTCAACTTTTTCCAACCATAGAAAAGGGATCATAGTTGCTTTCTTGTGCCAAGGGCTACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR-3UTR TCA 90 bp TTCCCATTACAGTACATAACAGAACATCAATGGTTTGGGGACCATCATCATGTCCCCAATATCCAGGCATaGCTCTTACTTAGGTTTGGC +
Preference number: 2 (lower is better)
Translates to: FPLQYITEHQWFGDHHHVPNIQA*LLLRFG
Trigger: GCCAAACCTAAGTAAGAGTCATGCCTGGATATTGGG...GACATGATGATGGTCCCCAAACCATTGATGTTCTGTTATGTACTGTAATGGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR-3UTR TCA 90 bp TTAACAATGAAGGGGAGCAAAGCATACGTGAATGTACTGGAACAGGTCTCAGCACAGCAAATATGGGCCTaGATAATCTTCACAAGGTCA +
Preference number: 2 (lower is better)
Translates to: LTMKGSKAYVNVLEQVSAQQIWA*IIFTRS
Trigger: TGACCTTGTGAAGATTATTCAGGCCCATATTTGCTG...TGCTGAGACCTGTTCCAGTACATTCACGTATGCTTTGCTCCCCTTCATTGTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR-3UTR GCA 90 bp CAAACACAGATAACAAGTTGGCAAAGATGTGGAGAAATTGGAACCCTTGTGCACGTCAGGCTGTCTTTGTaGAGAGCTATTAAACCAACC +
Preference number: 2 (lower is better)
Translates to: QTQITSWQRCGEIGTLVHVRLSL*RAIKPT
Trigger: GGTTGGTTTAATAGCTCTGCACAAAGACAGCCTGAC...GTGCACAAGGGTTCCAATTTCTCCACATCTTTGCCAACTTGTTATCTGTGTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR-3UTR CCA 90 bp CAGTGTATGTGTAATATAGACATTCAAGTCAGGCTGTCTTTGTGCAGAGCTATTTTTTCTGCCAATCAGTaGTCCCCTCTGCTCATCAGG +
Preference number: 2 (lower is better)
Translates to: QCMCNIDIQVRLSLCRAIFSANQ*SPLLIR
Trigger: CCTGATGAGCAGAGGGGACCACTGATTGGCAGAAAA...AATAGCTCTGCACAAAGACAGCCTGACTTGAATGTCTATATTACACATACACTG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR CAA 90 bp TGGGCACAGAGTTTCAGTTACGCAGGATGCATAGGTGAGAGAGATTaGCTGTACAACACTGTGGCTATAGTTAACAATACTGTATTGTGT +
Preference number: 2 (lower is better)
Translates to: WAQSFSYAGCIGERD*LYNTVAIVNNTVLC
Trigger: ACACAATACAGTATTGTTAACTATAGCCACAGTGTTGTACAGCAAATCTCTCTCACCTATGCATCCTGCGTAACTGAAACTCTGTGCCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR-3UTR TCA 90 bp CAGTGTATGTGTAATATAGACATTCAAGTCAGGCTGTCTTTGTGCAGAGCTATTCCCAATATCCAGGCATaGCTCTTACTTAGGTTTGGC +
Preference number: 2 (lower is better)
Translates to: QCMCNIDIQVRLSLCRAIPNIQA*LLLRFG
Trigger: GCCAAACCTAAGTAAGAGTCATGCCTGGATATTGGG...AATAGCTCTGCACAAAGACAGCCTGACTTGAATGTCTATATTACACATACACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR-3UTR TCA 90 bp CAAACACAGATAACAAGTTGGCAAAGATGTGGAGAAATTGGAACCCTTGTGCACCCCCAAACAAATGACTaGAACCAACCAAACCAAAAC +
Preference number: 2 (lower is better)
Translates to: QTQITSWQRCGEIGTLVHPQTND*NQPNQN
Trigger: GTTTTGGTTTGGTTGGTTTCAGTCATTTGTTTGGGG...GTGCACAAGGGTTCCAATTTCTCCACATCTTTGCCAACTTGTTATCTGTGTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR-3UTR TCA 90 bp TGGCACAAGAAAGCAACTATGATCCCTTTTCTATGGTTGGAAAAAGTTGAGAATACACAGTTGAGTGCATaGGCACGTGAGTGTGAGATG +
Preference number: 2 (lower is better)
Translates to: WHKKATMIPFLWLEKVENTQLSA*ARECEM
Trigger: CATCTCACACTCACGTGCTCATGCACTCAACTGTGT...ATTCTCAACTTTTTCCAACCATAGAAAAGGGATCATAGTTGCTTTCTTGTGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR-3UTR TCA 90 bp ACATTCAAGTCAGGCTGTCTTTGTGCAGAGCTATTAAACCAACCGATAAATTTTACACAGTTGAGTGCATaGGCACGTGAGTGTGAGATG +
Preference number: 2 (lower is better)
Translates to: TFKSGCLCAELLNQPINFTQLSA*ARECEM
Trigger: CATCTCACACTCACGTGCTCATGCACTCAACTGTGT...AAAATTTATCGGTTGGTTTAATAGCTCTGCACAAAGACAGCCTGACTTGAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR-3UTR TCA 90 bp CAAACACAGATAACAAGTTGGCAAAGATGTGGAGAAATTGGAACCCTTGTGCACTCCTCAGTGATGAGATaGGGCAATTGTGATGCTTAT +
Preference number: 2 (lower is better)
Translates to: QTQITSWQRCGEIGTLVHSSVMR*GNCDAY
Trigger: ATAAGCATCACAATTGCCTCATCTCATCACTGAGGA...GTGCACAAGGGTTCCAATTTCTCCACATCTTTGCCAACTTGTTATCTGTGTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR-3UTR GCA 90 bp ACATTCAAGTCAGGCTGTCTTTGTGCAGAGCTATTAAACCAACCGATAAATTTTCCTGATCCTGATTTCTaGACTGGGTGGGGGAAGAAA +
Preference number: 2 (lower is better)
Translates to: TFKSGCLCAELLNQPINFPDPDF*TGWGKK
Trigger: TTTCTTCCCCCACCCAGTGCAGAAATCAGGATCAGG...AAAATTTATCGGTTGGTTTAATAGCTCTGCACAAAGACAGCCTGACTTGAATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR-3UTR CCA 90 bp TGGCACAAGAAAGCAACTATGATCCCTTTTCTATGGTTGGAAAAAGTTGAGAATCAGGCCTCTAGACACTaGCTTATCCCAATATCCAGG +
Preference number: 2 (lower is better)
Translates to: WHKKATMIPFLWLEKVENQASRH*LIPISR
Trigger: CCTGGATATTGGGATAAGCCAGTGTCTAGAGGCCTG...ATTCTCAACTTTTTCCAACCATAGAAAAGGGATCATAGTTGCTTTCTTGTGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR-3UTR CCA 90 bp TTAACAATGAAGGGGAGCAAAGCATACGTGAATGTACTGGAACAGGTCTCAGCAAGAACATCAATGGTTTaGGGACCATCATCATGTCTA +
Preference number: 2 (lower is better)
Translates to: LTMKGSKAYVNVLEQVSARTSMV*GPSSCL
Trigger: TAGACATGATGATGGTCCCCAAACCATTGATGTTCT...TGCTGAGACCTGTTCCAGTACATTCACGTATGCTTTGCTCCCCTTCATTGTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR-3UTR CCA 90 bp TGGCACAAGAAAGCAACTATGATCCCTTTTCTATGGTTGGAAAAAGTTGAGAATGCAGAGCCATTCCTCTaGGACACCAGCACAATAGAT +
Preference number: 2 (lower is better)
Translates to: WHKKATMIPFLWLEKVENAEPFL*DTSTID
Trigger: ATCTATTGTGCTGGTGTCCCAGAGGAATGGCTCTGC...ATTCTCAACTTTTTCCAACCATAGAAAAGGGATCATAGTTGCTTTCTTGTGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR-3UTR TCA 90 bp TTCCCATTACAGTACATAACAGAACATCAATGGTTTGGGGACCATCATCATGTCATCTCCCCAAACAAATaGCTGAAACCAACCAAACCA +
Preference number: 2 (lower is better)
Translates to: FPLQYITEHQWFGDHHHVISPNK*LKPTKP
Trigger: TGGTTTGGTTGGTTTCAGTCATTTGTTTGGGGAGAT...GACATGATGATGGTCCCCAAACCATTGATGTTCTGTTATGTACTGTAATGGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR-3UTR TCA 90 bp TTAACAATGAAGGGGAGCAAAGCATACGTGAATGTACTGGAACAGGTCTCAGCATTGCACTCATTATATTaGGGAATGGTTGGATCTGAA +
Preference number: 2 (lower is better)
Translates to: LTMKGSKAYVNVLEQVSALHSLY*GMVGSE
Trigger: TTCAGATCCAACCATTCCTCAATATAATGAGTGCAA...TGCTGAGACCTGTTCCAGTACATTCACGTATGCTTTGCTCCCCTTCATTGTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR-3UTR TCA 90 bp TTAACAATGAAGGGGAGCAAAGCATACGTGAATGTACTGGAACAGGTCTCAGCAGAAGCTCTGGTCTTTTaGTTAAATACACTGAAGTGT +
Preference number: 2 (lower is better)
Translates to: LTMKGSKAYVNVLEQVSAEALVF*LNTLKC
Trigger: ACACTTCAGTGTATTTAATCAAAAGACCAGAGCTTC...TGCTGAGACCTGTTCCAGTACATTCACGTATGCTTTGCTCCCCTTCATTGTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR-3UTR TCA 90 bp TTAACAATGAAGGGGAGCAAAGCATACGTGAATGTACTGGAACAGGTCTCAGCACAATCTCTCTGGAAATaGGACTTATACAGAAGTGTT +
Preference number: 2 (lower is better)
Translates to: LTMKGSKAYVNVLEQVSAQSLWK*DLYRSV
Trigger: AACACTTCTGTATAAGTCTCATTTCCAGAGAGATTG...TGCTGAGACCTGTTCCAGTACATTCACGTATGCTTTGCTCCCCTTCATTGTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR-3UTR TCA 90 bp GCTAATGGCAGGATAAACGCATCAACCACCATCTGTACTAAAGCAGAGTGTTTCTGTGAGATGCTTATATaGATTCTTGGTAGTGTGTTC +
Preference number: 2 (lower is better)
Translates to: ANGRINASTTICTKAECFCEMLI*ILGSVF
Trigger: GAACACACTACCAAGAATTCATATAAGCATCTCACA...GAAACACTCTGCTTTAGTACAGATGGTGGTTGATGCGTTTATCCTGCCATTAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR-3UTR TCA 90 bp TTAACAATGAAGGGGAGCAAAGCATACGTGAATGTACTGGAACAGGTCTCAGCACTTGAAGACTACCTCTaGGATGAAGAAATAAATCCT +
Preference number: 2 (lower is better)
Translates to: LTMKGSKAYVNVLEQVSALEDYL*DEEINP
Trigger: AGGATTTATTTCTTCATCTCAGAGGTAGTCTTCAAG...TGCTGAGACCTGTTCCAGTACATTCACGTATGCTTTGCTCCCCTTCATTGTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR-3UTR GCA 90 bp TTTGACTTTTTCCTGTCTAATTTGGGCAGCCTTTCAACTAAAGGAAGTCAATCAAGAATCTACTCTTCCTaGCACTCCAGGGATTTCCCA +
Preference number: 2 (lower is better)
Translates to: FDFFLSNLGSLSTKGSQSRIYSS*HSRDFP
Trigger: TGGGAAATCCCTGGAGTGGCAGGAAGAGTAGATTCT...TGATTGACTTCCTTTAGTTGAAAGGCTGCCCAAATTAGACAGGAAAAAGTCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR-3UTR CCA 90 bp TGGCACAAGAAAGCAACTATGATCCCTTTTCTATGGTTGGAAAAAGTTGAGAATAAAAGTTGTATTCCTTaGCATGGGGCCCATCCACCT +
Preference number: 2 (lower is better)
Translates to: WHKKATMIPFLWLEKVENKSCIP*HGAHPP
Trigger: AGGTGGATGGGCCCCATGCCAAGGAATACAACTTTT...ATTCTCAACTTTTTCCAACCATAGAAAAGGGATCATAGTTGCTTTCTTGTGCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR-3UTR CCA 90 bp TTTAAAATGGGGAATGGCCTACTTTCTGCTACTGGCTCAATTTGCTTTCCTTTGTGGCTCTTTCAGCTTTaGAGGTATTTTCCACACAGT +
Preference number: 2 (lower is better)
Translates to: FKMGNGLLSATGSICFPLWLFQL*RYFPHS
Trigger: ACTGTGTGGAAAATACCTCCAAAGCTGAAAGAGCCA...CAAAGGAAAGCAAATTGAGCCAGTAGCAGAAAGTAGGCCATTCCCCATTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR-3UTR TCA 90 bp TTTGACTTTTTCCTGTCTAATTTGGGCAGCCTTTCAACTAAAGGAAGTCAATCAGAATGCTTAAGGCTATaGCTGCATATAGGGCCTCAT +
Preference number: 2 (lower is better)
Translates to: FDFFLSNLGSLSTKGSQSECLRL*LHIGPH
Trigger: ATGAGGCCCTATATGCAGTCATAGCCTTAAGCATTC...TGATTGACTTCCTTTAGTTGAAAGGCTGCCCAAATTAGACAGGAAAAAGTCAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR-3UTR TCA 90 bp TGGCACAAGAAAGCAACTATGATCCCTTTTCTATGGTTGGAAAAAGTTGAGAATGAATGCTTAAGGCTATaGCTGCATATAGGGCCTCAT +
Preference number: 2 (lower is better)
Translates to: WHKKATMIPFLWLEKVENECLRL*LHIGPH
Trigger: ATGAGGCCCTATATGCAGTCATAGCCTTAAGCATTC...ATTCTCAACTTTTTCCAACCATAGAAAAGGGATCATAGTTGCTTTCTTGTGCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR-3UTR TCA 90 bp CAAACACAGATAACAAGTTGGCAAAGATGTGGAGAAATTGGAACCCTTGTGCACTTCACTAGGGGAAGATaGATGTATTTTGAGCCTAAA +
Preference number: 2 (lower is better)
Translates to: QTQITSWQRCGEIGTLVHFTRGR*MYFEPK
Trigger: TTTAGGCTCAAAATACATTCATCTTCCCCTAGTGAA...GTGCACAAGGGTTCCAATTTCTCCACATCTTTGCCAACTTGTTATCTGTGTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR-3UTR TCA 90 bp CAGTGTATGTGTAATATAGACATTCAAGTCAGGCTGTCTTTGTGCAGAGCTATTCCCAAATCCTTTATTTaGTTGGTGTGGGTGCAATTC +
Preference number: 2 (lower is better)
Translates to: QCMCNIDIQVRLSLCRAIPKSFI*LVWVQF
Trigger: GAATTGCACCCACACCAATCAAATAAAGGATTTGGG...AATAGCTCTGCACAAAGACAGCCTGACTTGAATGTCTATATTACACATACACTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR-3UTR TCA 90 bp CAGTGTATGTGTAATATAGACATTCAAGTCAGGCTGTCTTTGTGCAGAGCTATTATGGTTGGAAAAAGTTaGGAATCTACTCTTCCTGCC +
Preference number: 2 (lower is better)
Translates to: QCMCNIDIQVRLSLCRAIMVGKS*ESTLPA
Trigger: GGCAGGAAGAGTAGATTCTCAACTTTTTCCAACCAT...AATAGCTCTGCACAAAGACAGCCTGACTTGAATGTCTATATTACACATACACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR-3UTR CCA 90 bp TTTGACTTTTTCCTGTCTAATTTGGGCAGCCTTTCAACTAAAGGAAGTCAATCACATCAGGTAAATACCTaGCTCTTTCAGCTTTGGAGG +
Preference number: 2 (lower is better)
Translates to: FDFFLSNLGSLSTKGSQSHQVNT*LFQLWR
Trigger: CCTCCAAAGCTGAAAGAGCCAGGTATTTACCTGATG...TGATTGACTTCCTTTAGTTGAAAGGCTGCCCAAATTAGACAGGAAAAAGTCAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR-3UTR CCA 90 bp CAAACACAGATAACAAGTTGGCAAAGATGTGGAGAAATTGGAACCCTTGTGCACTTTTCCTGTCTAATTTaGGCAGCCTTTCAACTAAAG +
Preference number: 2 (lower is better)
Translates to: QTQITSWQRCGEIGTLVHFSCLI*AAFQLK
Trigger: CTTTAGTTGAAAGGCTGCCCAAATTAGACAGGAAAA...GTGCACAAGGGTTCCAATTTCTCCACATCTTTGCCAACTTGTTATCTGTGTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR-3UTR TCA 90 bp CAGTGTATGTGTAATATAGACATTCAAGTCAGGCTGTCTTTGTGCAGAGCTATTGTATTTTCCACACAGTaGTACAGCAAAGGGTTTTGT +
Preference number: 2 (lower is better)
Translates to: QCMCNIDIQVRLSLCRAIVFSTQ*YSKGFC
Trigger: ACAAAACCCTTTGCTGTATCACTGTGTGGAAAATAC...AATAGCTCTGCACAAAGACAGCCTGACTTGAATGTCTATATTACACATACACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR-3UTR TCA 90 bp TGGCACAAGAAAGCAACTATGATCCCTTTTCTATGGTTGGAAAAAGTTGAGAATATCTCCCCAAACAAATaGCTGAAACCAACCAAACCA +
Preference number: 2 (lower is better)
Translates to: WHKKATMIPFLWLEKVENISPNK*LKPTKP
Trigger: TGGTTTGGTTGGTTTCAGTCATTTGTTTGGGGAGAT...ATTCTCAACTTTTTCCAACCATAGAAAAGGGATCATAGTTGCTTTCTTGTGCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR-3UTR TCA 90 bp TGGCACAAGAAAGCAACTATGATCCCTTTTCTATGGTTGGAAAAAGTTGAGAATGCCAGTGTCATATTCTaGACACACTTGTCTTTGTCA +
Preference number: 2 (lower is better)
Translates to: WHKKATMIPFLWLEKVENASVIF*THLSLS
Trigger: TGACAAAGACAAGTGTGTTCAGAATATGACACTGGC...ATTCTCAACTTTTTCCAACCATAGAAAAGGGATCATAGTTGCTTTCTTGTGCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR-3UTR GCA 90 bp ACATTCAAGTCAGGCTGTCTTTGTGCAGAGCTATTAAACCAACCGATAAATTTTGAATGGCCTACTTTCTaGTACTGGCTCAATTTGCTT +
Preference number: 2 (lower is better)
Translates to: TFKSGCLCAELLNQPINFEWPTF*YWLNLL
Trigger: AAGCAAATTGAGCCAGTAGCAGAAAGTAGGCCATTC...AAAATTTATCGGTTGGTTTAATAGCTCTGCACAAAGACAGCCTGACTTGAATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR-3UTR CCA 90 bp TGGCACAAGAAAGCAACTATGATCCCTTTTCTATGGTTGGAAAAAGTTGAGAATTGGCTCTTTCAGCTTTaGAGGTATTTTCCACACAGT +
Preference number: 2 (lower is better)
Translates to: WHKKATMIPFLWLEKVENWLFQL*RYFPHS
Trigger: ACTGTGTGGAAAATACCTCCAAAGCTGAAAGAGCCA...ATTCTCAACTTTTTCCAACCATAGAAAAGGGATCATAGTTGCTTTCTTGTGCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR-3UTR CCA 90 bp TTTGACTTTTTCCTGTCTAATTTGGGCAGCCTTTCAACTAAAGGAAGTCAATCAAGAGAAAGTAGCCCTTaGCACAAGAAAGCAACTATG +
Preference number: 2 (lower is better)
Translates to: FDFFLSNLGSLSTKGSQSRESSP*HKKATM
Trigger: CATAGTTGCTTTCTTGTGCCAAGGGCTACTTTCTCT...TGATTGACTTCCTTTAGTTGAAAGGCTGCCCAAATTAGACAGGAAAAAGTCAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR CAA 90 bp GCAGAGCTATTAAACCAACCGATAAATTTTCGCCCAACAATTGATTaGACTTTTTCCTGTCTAATTTGGGCAGCCTTTCAACTAAAGGAA +
Preference number: 2 (lower is better)
Translates to: AELLNQPINFRPTID*TFSCLIWAAFQLKE
Trigger: TTCCTTTAGTTGAAAGGCTGCCCAAATTAGACAGGAAAAAGTCAAATCAATTGTTGGGCGAAAATTTATCGGTTGGTTTAATAGCTCTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR-3UTR TCA 90 bp TTTGACTTTTTCCTGTCTAATTTGGGCAGCCTTTCAACTAAAGGAAGTCAATCATTCCCATCAAGTGATTaGGGCTGTTTAATTCATTGC +
Preference number: 2 (lower is better)
Translates to: FDFFLSNLGSLSTKGSQSFPSSD*GCLIHC
Trigger: GCAATGAATTAAACAGCCTCAATCACTTGATGGGAA...TGATTGACTTCCTTTAGTTGAAAGGCTGCCCAAATTAGACAGGAAAAAGTCAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR-3UTR TCA 90 bp TGGCACAAGAAAGCAACTATGATCCCTTTTCTATGGTTGGAAAAAGTTGAGAATGGATTTCCCATCAAGTaGTTGAGGCTGTTTAATTCA +
Preference number: 2 (lower is better)
Translates to: WHKKATMIPFLWLEKVENGFPIK*LRLFNS
Trigger: TGAATTAAACAGCCTCAATCACTTGATGGGAAATCC...ATTCTCAACTTTTTCCAACCATAGAAAAGGGATCATAGTTGCTTTCTTGTGCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR-3UTR TCA 90 bp ACATTCAAGTCAGGCTGTCTTTGTGCAGAGCTATTAAACCAACCGATAAATTTTACAAGAAAGCAACTATaGTCCCTTTTCTATGGTTGG +
Preference number: 2 (lower is better)
Translates to: TFKSGCLCAELLNQPINFTRKQL*SLFYGW
Trigger: CCAACCATAGAAAAGGGATCATAGTTGCTTTCTTGT...AAAATTTATCGGTTGGTTTAATAGCTCTGCACAAAGACAGCCTGACTTGAATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR-3UTR GCA 90 bp TTTGACTTTTTCCTGTCTAATTTGGGCAGCCTTTCAACTAAAGGAAGTCAATCAGCTACTGGCTCAATTTaGTTTCCTTTGATGTCCATT +
Preference number: 2 (lower is better)
Translates to: FDFFLSNLGSLSTKGSQSATGSI*FPLMSI
Trigger: AATGGACATCAAAGGAAAGCAAATTGAGCCAGTAGC...TGATTGACTTCCTTTAGTTGAAAGGCTGCCCAAATTAGACAGGAAAAAGTCAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR-3UTR CCA 90 bp TGGCACAAGAAAGCAACTATGATCCCTTTTCTATGGTTGGAAAAAGTTGAGAATAGAACATCAATGGTTTaGGGACCATCATCATGTCTA +
Preference number: 2 (lower is better)
Translates to: WHKKATMIPFLWLEKVENRTSMV*GPSSCL
Trigger: TAGACATGATGATGGTCCCCAAACCATTGATGTTCT...ATTCTCAACTTTTTCCAACCATAGAAAAGGGATCATAGTTGCTTTCTTGTGCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR-3UTR CCA 90 bp CAGTGTATGTGTAATATAGACATTCAAGTCAGGCTGTCTTTGTGCAGAGCTATTATAACAGAACATCAATaGTTTGGGGACCATCATCAT +
Preference number: 2 (lower is better)
Translates to: QCMCNIDIQVRLSLCRAIITEHQ*FGDHHH
Trigger: ATGATGATGGTCCCCAAACCATTGATGTTCTGTTAT...AATAGCTCTGCACAAAGACAGCCTGACTTGAATGTCTATATTACACATACACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR-3UTR CCA 90 bp TTTGACTTTTTCCTGTCTAATTTGGGCAGCCTTTCAACTAAAGGAAGTCAATCACCTACTTTCTGCTACTaGCTCAATTTGCTTTCCTTT +
Preference number: 2 (lower is better)
Translates to: FDFFLSNLGSLSTKGSQSPTFCY*LNLLSF
Trigger: AAAGGAAAGCAAATTGAGCCAGTAGCAGAAAGTAGG...TGATTGACTTCCTTTAGTTGAAAGGCTGCCCAAATTAGACAGGAAAAAGTCAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR-3UTR TCA 90 bp ATGTCATTTACATATGTGCAGTTTCACGTGAATATGCATAATCTTCCTGGTATGGTATTTTCCACACAGTaGTACAGCAAAGGGTTTTGT +
Preference number: 2 (lower is better)
Translates to: MSFTYVQFHVNMHNLPGMVFSTQ*YSKGFC
Trigger: ACAAAACCCTTTGCTGTATCACTGTGTGGAAAATAC...CATACCAGGAAGATTATGCATATTCACGTGAAACTGCACATATGTAAATGACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR-3UTR TCA 90 bp ACATTCAAGTCAGGCTGTCTTTGTGCAGAGCTATTAAACCAACCGATAAATTTTTTGCACTCATTATATTaGGGAATGGTTGGATCTGAA +
Preference number: 2 (lower is better)
Translates to: TFKSGCLCAELLNQPINFLHSLY*GMVGSE
Trigger: TTCAGATCCAACCATTCCTCAATATAATGAGTGCAA...AAAATTTATCGGTTGGTTTAATAGCTCTGCACAAAGACAGCCTGACTTGAATGT
37% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR-3UTR TCA 90 bp TGGCACAAGAAAGCAACTATGATCCCTTTTCTATGGTTGGAAAAAGTTGAGAATGAAGCTCTGGTCTTTTaGTTAAATACACTGAAGTGT +
Preference number: 2 (lower is better)
Translates to: WHKKATMIPFLWLEKVENEALVF*LNTLKC
Trigger: ACACTTCAGTGTATTTAATCAAAAGACCAGAGCTTC...ATTCTCAACTTTTTCCAACCATAGAAAAGGGATCATAGTTGCTTTCTTGTGCCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR-3UTR TCA 90 bp TGGCACAAGAAAGCAACTATGATCCCTTTTCTATGGTTGGAAAAAGTTGAGAATTGTGAGATGCTTATATaGATTCTTGGTAGTGTGTTC +
Preference number: 2 (lower is better)
Translates to: WHKKATMIPFLWLEKVENCEMLI*ILGSVF
Trigger: GAACACACTACCAAGAATTCATATAAGCATCTCACA...ATTCTCAACTTTTTCCAACCATAGAAAAGGGATCATAGTTGCTTTCTTGTGCCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR-3UTR GCA 90 bp TGGCACAAGAAAGCAACTATGATCCCTTTTCTATGGTTGGAAAAAGTTGAGAATCACGTGAGTGTGAGATaGTTATATGAATTCTTGGTA +
Preference number: 2 (lower is better)
Translates to: WHKKATMIPFLWLEKVENHVSVR*LYEFLV
Trigger: TACCAAGAATTCATATAAGCATCTCACACTCACGTG...ATTCTCAACTTTTTCCAACCATAGAAAAGGGATCATAGTTGCTTTCTTGTGCCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR-3UTR GCA 90 bp ACATTCAAGTCAGGCTGTCTTTGTGCAGAGCTATTAAACCAACCGATAAATTTTCACGTGAGTGTGAGATaGTTATATGAATTCTTGGTA +
Preference number: 2 (lower is better)
Translates to: TFKSGCLCAELLNQPINFHVSVR*LYEFLV
Trigger: TACCAAGAATTCATATAAGCATCTCACACTCACGTG...AAAATTTATCGGTTGGTTTAATAGCTCTGCACAAAGACAGCCTGACTTGAATGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR-3UTR CCA 90 bp ACATTCAAGTCAGGCTGTCTTTGTGCAGAGCTATTAAACCAACCGATAAATTTTTTTTCCTGTCTAATTTaGGCAGCCTTTCAACTAAAG +
Preference number: 2 (lower is better)
Translates to: TFKSGCLCAELLNQPINFFSCLI*AAFQLK
Trigger: CTTTAGTTGAAAGGCTGCCCAAATTAGACAGGAAAA...AAAATTTATCGGTTGGTTTAATAGCTCTGCACAAAGACAGCCTGACTTGAATGT
37% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR CCA 72 bp CTGCTCAGGGCACAAAGACCTCCTCGGTCCACGCTCTaGAGCAGGGCGGGGGACGGGTGGTGTCCTAAAAGA +
Preference number: 3 (lower is better)
Translates to: LLRAQRPPRSTL*SRAGDGWCPKR
Trigger: TCTTTTAGGACACCACCCGTCCCCCGCCCTGCTCCAGAGCGTGGACCGAGGAGGTCTTTGTGCCCTGAGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR GCA 72 bp CGTGTAGCATCCCTCTTTCTGGTGTTATCCGGTCCCTaGTCAGGGCACAAAGACCTCCTCGGTCCACGCTCT +
Preference number: 3 (lower is better)
Translates to: RVASLFLVLSGP*SGHKDLLGPRS
Trigger: AGAGCGTGGACCGAGGAGGTCTTTGTGCCCTGAGCAGGGACCGGATAACACCAGAAAGAGGGATGCTACACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR GCA 72 bp GCCAACATGCTAGCGTCATGTGAAGTGTCCCGTCACTaGTGTCTGAGGGCACTTAGGAGACATGAGCTGCCT +
Preference number: 3 (lower is better)
Translates to: ANMLASCEVSRH*CLRALRRHELP
Trigger: AGGCAGCTCATGTCTCCTAAGTGCCCTCAGACAGCAGTGACGGGACACTTCACATGACGCTAGCATGTTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR-3UTR CAA 90 bp GACTCTTACCCAAAACAAGGCAGAGCCATTCCTCTGGGACACCAGCACAATAGAGAAAAGTTGTATTCCTaGGCATGGGGCCCATCCACC +
Preference number: 3 (lower is better)
Translates to: DSYPKQGRAIPLGHQHNREKLYS*AWGPST
Trigger: GGTGGATGGGCCCCATGCCAAGGAATACAACTTTTC...TCTATTGTGCTGGTGTCCCAGAGGAATGGCTCTGCCTTGTTTTGGGTAAGAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR CCA 72 bp TGTCTGAGGGCACTTAGGAGACATGAGCTGCCTGAGTaGATCTCTTCACACCAAGCTAACAGTCAAGAGTTG +
Preference number: 3 (lower is better)
Translates to: CLRALRRHELPE*ISSHQANSQEL
Trigger: CAACTCTTGACTGTTAGCTTGGTGTGAAGAGATCCACTCAGGCAGCTCATGTCTCCTAAGTGCCCTCAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR CCA 72 bp CTGGTTCTTCAGCGGTTCCTTCAGGCCTCTAGACACTaGCTTATCCCAATATCCAGGCATGACTCTTACTTA +
Preference number: 3 (lower is better)
Translates to: LVLQRFLQASRH*LIPISRHDSYL
Trigger: TAAGTAAGAGTCATGCCTGGATATTGGGATAAGCCAGTGTCTAGAGGCCTGAAGGAACCGCTGAAGAACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR-3UTR CAA 90 bp TTAACAATGAAGGGGAGCAAAGCATACGTGAATGTACTGGAACAGGTCTCAGCAGAAAAGTTGTATTCCTaGGCATGGGGCCCATCCACC +
Preference number: 3 (lower is better)
Translates to: LTMKGSKAYVNVLEQVSAEKLYS*AWGPST
Trigger: GGTGGATGGGCCCCATGCCAAGGAATACAACTTTTC...TGCTGAGACCTGTTCCAGTACATTCACGTATGCTTTGCTCCCCTTCATTGTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR-3UTR CAA 90 bp TTAACAATGAAGGGGAGCAAAGCATACGTGAATGTACTGGAACAGGTCTCAGCATCTCAGGGACTTATCTaGAGAGGAGAAACCCCCGTG +
Preference number: 3 (lower is better)
Translates to: LTMKGSKAYVNVLEQVSASQGLI*RGETPV
Trigger: CACGGGGGTTTCTCCTCTCAAGATAAGTCCCTGAGA...TGCTGAGACCTGTTCCAGTACATTCACGTATGCTTTGCTCCCCTTCATTGTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR-3UTR CAA 90 bp GCTAATGGCAGGATAAACGCATCAACCACCATCTGTACTAAAGCAGAGTGTTTCGGAAGGAAACGTGTCTaGGAAGAGGAGATCTCCTCT +
Preference number: 3 (lower is better)
Translates to: ANGRINASTTICTKAECFGRKRV*EEEISS
Trigger: AGAGGAGATCTCCTCTTCCAAGACACGTTTCCTTCC...GAAACACTCTGCTTTAGTACAGATGGTGGTTGATGCGTTTATCCTGCCATTAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR GCA 72 bp GCTGTTCAATGGGCACAGAGTTTCAGTTACGCAGGATaGATAGGTGAGAGAGATTTGCTGTACAACACTGTG +
Preference number: 3 (lower is better)
Translates to: AVQWAQSFSYAG*IGERDLLYNTV
Trigger: CACAGTGTTGTACAGCAAATCTCTCTCACCTATGCATCCTGCGTAACTGAAACTCTGTGCCCATTGAACAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR CCA 72 bp CAATCAGTGGTCCCCTCTGCTCATCAGGTAAATACCTaGCTCTTTCAGCTTTGGAGGTATTTTCCACACAGT +
Preference number: 3 (lower is better)
Translates to: QSVVPSAHQVNT*LFQLWRYFPHS
Trigger: ACTGTGTGGAAAATACCTCCAAAGCTGAAAGAGCCAGGTATTTACCTGATGAGCAGAGGGGACCACTGATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR TCA 72 bp ATGGGCACAGAGTTTCAGTTACGCAGGATGCATAGGTaGGAGAGATTTGCTGTACAACACTGTGGCTATAGT +
Preference number: 3 (lower is better)
Translates to: MGTEFQLRRMHR*ERFAVQHCGYS
Trigger: ACTATAGCCACAGTGTTGTACAGCAAATCTCTCTCACCTATGCATCCTGCGTAACTGAAACTCTGTGCCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR TCA 72 bp CTACTCTTCCTGCCACTCCAGGGATTTCCCATCAAGTaGTTGAGGCTGTTTAATTCATTGCCCAAATCCTTT +
Preference number: 3 (lower is better)
Translates to: LLFLPLQGFPIK*LRLFNSLPKSF
Trigger: AAAGGATTTGGGCAATGAATTAAACAGCCTCAATCACTTGATGGGAAATCCCTGGAGTGGCAGGAAGAGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR GCA 72 bp GAACCCTTGTGCACCATTGGTAAGTATGTAAACAGATaGAACCACTGTGGAAAGCAGCACAGAAGTTTCTCA +
Preference number: 3 (lower is better)
Translates to: EPLCTIGKYVNR*NHCGKQHRSFS
Trigger: TGAGAAACTTCTGTGCTGCTTTCCACAGTGGTTGCATCTGTTTACATACTTACCAATGGTGCACAAGGGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR CCA 72 bp TCTGCTCATCAGGTAAATACCTGGCTCTTTCAGCTTTaGAGGTATTTTCCACACAGTGATACAGCAAAGGGT +
Preference number: 3 (lower is better)
Translates to: SAHQVNTWLFQL*RYFPHSDTAKG
Trigger: ACCCTTTGCTGTATCACTGTGTGGAAAATACCTCCAAAGCTGAAAGAGCCAGGTATTTACCTGATGAGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR-3UTR CAA 90 bp ACATTCAAGTCAGGCTGTCTTTGTGCAGAGCTATTAAACCAACCGATAAATTTTTCTCAGGGACTTATCTaGAGAGGAGAAACCCCCGTG +
Preference number: 3 (lower is better)
Translates to: TFKSGCLCAELLNQPINFSQGLI*RGETPV
Trigger: CACGGGGGTTTCTCCTCTCAAGATAAGTCCCTGAGA...AAAATTTATCGGTTGGTTTAATAGCTCTGCACAAAGACAGCCTGACTTGAATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR-3UTR CAA 90 bp GCTAATGGCAGGATAAACGCATCAACCACCATCTGTACTAAAGCAGAGTGTTTCTGCTACTGGCTCAATTaGCTTTCCTTTGATGTCCAT +
Preference number: 3 (lower is better)
Translates to: ANGRINASTTICTKAECFCYWLN*LSFDVH
Trigger: ATGGACATCAAAGGAAAGCAAATTGAGCCAGTAGCA...GAAACACTCTGCTTTAGTACAGATGGTGGTTGATGCGTTTATCCTGCCATTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR-3UTR CAA 90 bp CAAACACAGATAACAAGTTGGCAAAGATGTGGAGAAATTGGAACCCTTGTGCACCAAGTCAGGCTGTCTTaGTGCAGAGCTATTAAACCA +
Preference number: 3 (lower is better)
Translates to: QTQITSWQRCGEIGTLVHQVRLS*CRAIKP
Trigger: TGGTTTAATAGCTCTGCACAAAGACAGCCTGACTTG...GTGCACAAGGGTTCCAATTTCTCCACATCTTTGCCAACTTGTTATCTGTGTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR-3UTR CAA 90 bp ATGTCATTTACATATGTGCAGTTTCACGTGAATATGCATAATCTTCCTGGTATGGGAAGGAAACGTGTCTaGGAAGAGGAGATCTCCTCT +
Preference number: 3 (lower is better)
Translates to: MSFTYVQFHVNMHNLPGMGRKRV*EEEISS
Trigger: AGAGGAGATCTCCTCTTCCAAGACACGTTTCCTTCC...CATACCAGGAAGATTATGCATATTCACGTGAAACTGCACATATGTAAATGACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR-3UTR CAA 90 bp CAGTGTATGTGTAATATAGACATTCAAGTCAGGCTGTCTTTGTGCAGAGCTATTCAGAACATCAATGGTTaGGGGACCATCATCATGTCT +
Preference number: 3 (lower is better)
Translates to: QCMCNIDIQVRLSLCRAIQNING*GTIIMS
Trigger: AGACATGATGATGGTCCCCAAACCATTGATGTTCTG...AATAGCTCTGCACAAAGACAGCCTGACTTGAATGTCTATATTACACATACACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR-3UTR CAA 90 bp GCTAATGGCAGGATAAACGCATCAACCACCATCTGTACTAAAGCAGAGTGTTTCTTTTTCCTGTCTAATTaGGGCAGCCTTTCAACTAAA +
Preference number: 3 (lower is better)
Translates to: ANGRINASTTICTKAECFFFLSN*GSLSTK
Trigger: TTTAGTTGAAAGGCTGCCCAAATTAGACAGGAAAAA...GAAACACTCTGCTTTAGTACAGATGGTGGTTGATGCGTTTATCCTGCCATTAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR CCA 72 bp CTTCCCATTACAGTACATAACAGAACATCAATGGTTTaGGGACCATCATCATGTCTAGCTATAAGACCAGAT +
Preference number: 3 (lower is better)
Translates to: LPITVHNRTSMV*GPSSCLAIRPD
Trigger: ATCTGGTCTTATAGCTAGACATGATGATGGTCCCCAAACCATTGATGTTCTGTTATGTACTGTAATGGGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR-3UTR CAA 90 bp ACATTCAAGTCAGGCTGTCTTTGTGCAGAGCTATTAAACCAACCGATAAATTTTTGCTACTGGCTCAATTaGCTTTCCTTTGATGTCCAT +
Preference number: 3 (lower is better)
Translates to: TFKSGCLCAELLNQPINFCYWLN*LSFDVH
Trigger: ATGGACATCAAAGGAAAGCAAATTGAGCCAGTAGCA...AAAATTTATCGGTTGGTTTAATAGCTCTGCACAAAGACAGCCTGACTTGAATGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR-3UTR CAA 90 bp TTTGACTTTTTCCTGTCTAATTTGGGCAGCCTTTCAACTAAAGGAAGTCAATCAGACTCTTACTTAGGTTaGGCTAAGTTCTGTTTTCTG +
Preference number: 3 (lower is better)
Translates to: FDFFLSNLGSLSTKGSQSDSYLG*AKFCFL
Trigger: CAGAAAACAGAACTTAGCCAAACCTAAGTAAGAGTC...TGATTGACTTCCTTTAGTTGAAAGGCTGCCCAAATTAGACAGGAAAAAGTCAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR-3UTR CAA 90 bp CAGTGTATGTGTAATATAGACATTCAAGTCAGGCTGTCTTTGTGCAGAGCTATTAGAAGCTCTGGTCTTTaGATTAAATACACTGAAGTG +
Preference number: 3 (lower is better)
Translates to: QCMCNIDIQVRLSLCRAIRSSGL*IKYTEV
Trigger: CACTTCAGTGTATTTAATCAAAAGACCAGAGCTTCT...AATAGCTCTGCACAAAGACAGCCTGACTTGAATGTCTATATTACACATACACTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR-3UTR CAA 90 bp TTTGACTTTTTCCTGTCTAATTTGGGCAGCCTTTCAACTAAAGGAAGTCAATCATATGGTTGGAAAAAGTaGAGAATCTACTCTTCCTGC +
Preference number: 3 (lower is better)
Translates to: FDFFLSNLGSLSTKGSQSYGWKK*RIYSSC
Trigger: GCAGGAAGAGTAGATTCTCAACTTTTTCCAACCATA...TGATTGACTTCCTTTAGTTGAAAGGCTGCCCAAATTAGACAGGAAAAAGTCAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR-3UTR CAA 90 bp ACATTCAAGTCAGGCTGTCTTTGTGCAGAGCTATTAAACCAACCGATAAATTTTTATGGTTGGAAAAAGTaGAGAATCTACTCTTCCTGC +
Preference number: 3 (lower is better)
Translates to: TFKSGCLCAELLNQPINFYGWKK*RIYSSC
Trigger: GCAGGAAGAGTAGATTCTCAACTTTTTCCAACCATA...AAAATTTATCGGTTGGTTTAATAGCTCTGCACAAAGACAGCCTGACTTGAATGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR TCA 72 bp GCTATTAAACCAACCGATAAATTTTCGCCCAACAATTaGTTTGACTTTTTCCTGTCTAATTTGGGCAGCCTT +
Preference number: 3 (lower is better)
Translates to: AIKPTDKFSPNN*FDFFLSNLGSL
Trigger: AAGGCTGCCCAAATTAGACAGGAAAAAGTCAAATCAATTGTTGGGCGAAAATTTATCGGTTGGTTTAATAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR-3UTR CAA 90 bp ACATTCAAGTCAGGCTGTCTTTGTGCAGAGCTATTAAACCAACCGATAAATTTTTGCTTATATGAATTCTaGGTAGTGTGTTCAGAATGC +
Preference number: 3 (lower is better)
Translates to: TFKSGCLCAELLNQPINFCLYEF*VVCSEC
Trigger: GCATTCTGAACACACTACCAAGAATTCATATAAGCA...AAAATTTATCGGTTGGTTTAATAGCTCTGCACAAAGACAGCCTGACTTGAATGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR TCA 72 bp TCAGATACTTTAAACCAGCTTTCCTCAGTGATGAGATaGGGCAATTGTGATGCTTATTCCTTATGTTTAACA +
Preference number: 3 (lower is better)
Translates to: SDTLNQLSSVMR*GNCDAYSLCLT
Trigger: TGTTAAACATAAGGAATAAGCATCACAATTGCCTCATCTCATCACTGAGGAAAGCTGGTTTAAAGTATCTGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR TCA 72 bp CCAATCCTTCCCTTAAAAAGTCAGCAAATATGGGCCTaGATAATCTTCACAAGGTCATTAGATATAATGTAT +
Preference number: 3 (lower is better)
Translates to: PILPLKSQQIWA*IIFTRSLDIMY
Trigger: ATACATTATATCTAATGACCTTGTGAAGATTATTCAGGCCCATATTTGCTGACTTTTTAAGGGAAGGATTGG
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp TTCTGGTGTTATCCGGTCCCTGCTCAGGGCACAAAGACCTCCTCGGTCCACGCTTCTCGCGGGGCGTCCTaGCTGGGCTCCTCCGGCTCG +
Preference number: 4 (lower is better)
Translates to: FWCYPVPAQGTKTSSVHASRGAS*LGSSGS
Trigger: CGAGCCGGAGGAGCCCAGCCAGGACGCCCCGCGAGA...AGCGTGGACCGAGGAGGTCTTTGTGCCCTGAGCAGGGACCGGATAACACCAGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp TTCTGGTGTTATCCGGTCCCTGCTCAGGGCACAAAGACCTCCTCGGTCCACGCTCCTCGGTCCACGCTCTaGAGCAGGGCGGGGGACGGG +
Preference number: 4 (lower is better)
Translates to: FWCYPVPAQGTKTSSVHAPRSTL*SRAGDG
Trigger: CCCGTCCCCCGCCCTGCTCCAGAGCGTGGACCGAGG...AGCGTGGACCGAGGAGGTCTTTGTGCCCTGAGCAGGGACCGGATAACACCAGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp TTCTGGTGTTATCCGGTCCCTGCTCAGGGCACAAAGACCTCCTCGGTCCACGCTTGCGGGCTCACCTGCTaGGTCTCGCGGGGCGTCCTG +
Preference number: 4 (lower is better)
Translates to: FWCYPVPAQGTKTSSVHACGLTC*VSRGVL
Trigger: CAGGACGCCCCGCGAGACCCAGCAGGTGAGCCCGCA...AGCGTGGACCGAGGAGGTCTTTGTGCCCTGAGCAGGGACCGGATAACACCAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515384.2
CDS-3UTR GCA 90 bp TTCTGGTGTTATCCGGTCCCTGCTCAGGGCACAAAGACCTCCTCGGTCCACGCTTGGGGCTCGGGTCCCTaGTCCTCGGTCTGGGAGAGC +
Preference number: 4 (lower is better)
Translates to: FWCYPVPAQGTKTSSVHAWGSGP*SSVWES
Trigger: GCTCTCCCAGACCGAGGAGCAGGGACCCGAGCCCCA...AGCGTGGACCGAGGAGGTCTTTGTGCCCTGAGCAGGGACCGGATAACACCAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR TCA 90 bp TTCTGGTGTTATCCGGTCCCTGCTCAGGGCACAAAGACCTCCTCGGTCCACGCTGGCAGGCCGTTGCTCTaGTGGTGGTCCCAGCCAAGC +
Preference number: 4 (lower is better)
Translates to: FWCYPVPAQGTKTSSVHAGRPLL*WWSQPS
Trigger: GCTTGGCTGGGACCACCATCAGAGCAACGGCCTGCC...AGCGTGGACCGAGGAGGTCTTTGTGCCCTGAGCAGGGACCGGATAACACCAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR TCA 90 bp TTCTGGTGTTATCCGGTCCCTGCTCAGGGCACAAAGACCTCCTCGGTCCACGCTCCAAGCCCCGGTTGCTaGCTCTGCGGACCAGCACTT +
Preference number: 4 (lower is better)
Translates to: FWCYPVPAQGTKTSSVHAPSPGC*LCGPAL
Trigger: AAGTGCTGGTCCGCAGAGTCAGCAACCGGGGCTTGG...AGCGTGGACCGAGGAGGTCTTTGTGCCCTGAGCAGGGACCGGATAACACCAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR GCA 90 bp TTCTGGTGTTATCCGGTCCCTGCTCAGGGCACAAAGACCTCCTCGGTCCACGCTCCGCCTTCTTCCCGCTaGTCGAGCTGTCTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: FWCYPVPAQGTKTSSVHAPPSSR*SSCLPL
Trigger: CAGAGGAAGACAGCTCGAGCAGCGGGAAGAAGGCGG...AGCGTGGACCGAGGAGGTCTTTGTGCCCTGAGCAGGGACCGGATAACACCAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR GCA 90 bp GACTCTTACCCAAAACAAGGCAGAGCCATTCCTCTGGGACACCAGCACAATAGACCGGTGTCGCCGGGGTaGGCGAGGCCCTCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: DSYPKQGRAIPLGHQHNRPVSPG*ARPSAS
Trigger: AGAGGCAGAGGGCCTCGCGCACCCCGGCGACACCGG...TCTATTGTGCTGGTGTCCCAGAGGAATGGCTCTGCCTTGTTTTGGGTAAGAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515384.2
CDS-3UTR CCA 90 bp TTCTGGTGTTATCCGGTCCCTGCTCAGGGCACAAAGACCTCCTCGGTCCACGCTAGAAGCTGTGCGACTTaGCCACCGAGCTGCTGGCGA +
Preference number: 4 (lower is better)
Translates to: FWCYPVPAQGTKTSSVHARSCAT*PPSCWR
Trigger: TCGCCAGCAGCTCGGTGGCCAAGTCGCACAGCTTCT...AGCGTGGACCGAGGAGGTCTTTGTGCCCTGAGCAGGGACCGGATAACACCAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp TTCTGGTGTTATCCGGTCCCTGCTCAGGGCACAAAGACCTCCTCGGTCCACGCTTGGCTCGGCGCTGCATaGCGTTTTTGTGGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: FWCYPVPAQGTKTSSVHAWLGAA*RFCGRS
Trigger: GCTCCTGCCACAAAAACGCCATGCAGCGCCGAGCCA...AGCGTGGACCGAGGAGGTCTTTGTGCCCTGAGCAGGGACCGGATAACACCAGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515384.2
CDS-3UTR GCA 90 bp TTCTGGTGTTATCCGGTCCCTGCTCAGGGCACAAAGACCTCCTCGGTCCACGCTGACTTGGCTCGGCGCTaGATGGCGTTTTTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: FWCYPVPAQGTKTSSVHADLARR*MAFLWQ
Trigger: CTGCCACAAAAACGCCATGCAGCGCCGAGCCAAGTC...AGCGTGGACCGAGGAGGTCTTTGTGCCCTGAGCAGGGACCGGATAACACCAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515384.2
CDS-3UTR TCA 90 bp GCTAATGGCAGGATAAACGCATCAACCACCATCTGTACTAAAGCAGAGTGTTTCGCCAGCGCATGCCGCTaGACAGCCCCCGCAGCCCCC +
Preference number: 4 (lower is better)
Translates to: ANGRINASTTICTKAECFASACR*TAPAAP
Trigger: GGGGGCTGCGGGGGCTGTTCAGCGGCATGCGCTGGC...GAAACACTCTGCTTTAGTACAGATGGTGGTTGATGCGTTTATCCTGCCATTAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR GCA 90 bp TTCTGGTGTTATCCGGTCCCTGCTCAGGGCACAAAGACCTCCTCGGTCCACGCTAGTCCTTCAGCAAGCTaGCTGGTGTTCGCAGTGGAC +
Preference number: 4 (lower is better)
Translates to: FWCYPVPAQGTKTSSVHASPSAS*LVFAVD
Trigger: GTCCACTGCGAACACCAGGCAGCTTGCTGAAGGACT...AGCGTGGACCGAGGAGGTCTTTGTGCCCTGAGCAGGGACCGGATAACACCAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp GACTCTTACCCAAAACAAGGCAGAGCCATTCCTCTGGGACACCAGCACAATAGAGAACGGCCCCCGTCCTaGAAGCGTCCTCTGCCGTGC +
Preference number: 4 (lower is better)
Translates to: DSYPKQGRAIPLGHQHNRERPPS*KRPLPC
Trigger: GCACGGCAGAGGACGCTTCCAGGACGGGGGCCGTTC...TCTATTGTGCTGGTGTCCCAGAGGAATGGCTCTGCCTTGTTTTGGGTAAGAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515384.2
CDS-3UTR TCA 90 bp TTCTGGTGTTATCCGGTCCCTGCTCAGGGCACAAAGACCTCCTCGGTCCACGCTCTCAGGGACTTATCTTaGGAGGAGAAACCCCCGTGT +
Preference number: 4 (lower is better)
Translates to: FWCYPVPAQGTKTSSVHALRDLS*EEKPPC
Trigger: ACACGGGGGTTTCTCCTCTCAAGATAAGTCCCTGAG...AGCGTGGACCGAGGAGGTCTTTGTGCCCTGAGCAGGGACCGGATAACACCAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR GCA 90 bp GACTCTTACCCAAAACAAGGCAGAGCCATTCCTCTGGGACACCAGCACAATAGAGGTTTCCAGCGCAGCTaGCACCTTAGCCGCGCCCTC +
Preference number: 4 (lower is better)
Translates to: DSYPKQGRAIPLGHQHNRGFQRS*HLSRAL
Trigger: GAGGGCGCGGCTAAGGTGGCAGCTGCGCTGGAAACC...TCTATTGTGCTGGTGTCCCAGAGGAATGGCTCTGCCTTGTTTTGGGTAAGAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR GCA 90 bp TTCTGGTGTTATCCGGTCCCTGCTCAGGGCACAAAGACCTCCTCGGTCCACGCTTTCTTTTCCTTGCTCTaGCTGGAGGAGGGGAAAGGG +
Preference number: 4 (lower is better)
Translates to: FWCYPVPAQGTKTSSVHAFFSLL*LEEGKG
Trigger: CCCTTTCCCCTCCTCCAGGCAGAGCAAGGAAAAGAA...AGCGTGGACCGAGGAGGTCTTTGTGCCCTGAGCAGGGACCGGATAACACCAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR GCA 90 bp GCTAATGGCAGGATAAACGCATCAACCACCATCTGTACTAAAGCAGAGTGTTTCCCCTGCGGGCTCACCTaGTGGGTCTCGCGGGGCGTC +
Preference number: 4 (lower is better)
Translates to: ANGRINASTTICTKAECFPCGLT*WVSRGV
Trigger: GACGCCCCGCGAGACCCAGCAGGTGAGCCCGCAGGG...GAAACACTCTGCTTTAGTACAGATGGTGGTTGATGCGTTTATCCTGCCATTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515384.2
CDS-3UTR GCA 90 bp TTAACAATGAAGGGGAGCAAAGCATACGTGAATGTACTGGAACAGGTCTCAGCACGGGCGCCCGGCCGCTaGCGCCTTCGGAGTCGACAA +
Preference number: 4 (lower is better)
Translates to: LTMKGSKAYVNVLEQVSARAPGR*RLRSRQ
Trigger: TTGTCGACTCCGAAGGCGGCAGCGGCCGGGCGCCCG...TGCTGAGACCTGTTCCAGTACATTCACGTATGCTTTGCTCCCCTTCATTGTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515384.2
CDS-3UTR CCA 90 bp GCTAATGGCAGGATAAACGCATCAACCACCATCTGTACTAAAGCAGAGTGTTTCTCTCGCGGGGCGTCCTaGCTGGGCTCCTCCGGCTCG +
Preference number: 4 (lower is better)
Translates to: ANGRINASTTICTKAECFSRGAS*LGSSGS
Trigger: CGAGCCGGAGGAGCCCAGCCAGGACGCCCCGCGAGA...GAAACACTCTGCTTTAGTACAGATGGTGGTTGATGCGTTTATCCTGCCATTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp TTCTGGTGTTATCCGGTCCCTGCTCAGGGCACAAAGACCTCCTCGGTCCACGCTCATGCTTGTCACAGCTaGGACCTGCCTCTTCCTCTT +
Preference number: 4 (lower is better)
Translates to: FWCYPVPAQGTKTSSVHAHACHS*DLPLPL
Trigger: AAGAGGAAGAGGCAGGTCCCAGCTGTGACAAGCATG...AGCGTGGACCGAGGAGGTCTTTGTGCCCTGAGCAGGGACCGGATAACACCAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp GACTCTTACCCAAAACAAGGCAGAGCCATTCCTCTGGGACACCAGCACAATAGACCGAGGACGCGTCCTTaGCCGCTTCCACACACCTGG +
Preference number: 4 (lower is better)
Translates to: DSYPKQGRAIPLGHQHNRPRTRP*PLPHTW
Trigger: CCAGGTGTGTGGAAGCGGCCAAGGACGCGTCCTCGG...TCTATTGTGCTGGTGTCCCAGAGGAATGGCTCTGCCTTGTTTTGGGTAAGAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR GCA 90 bp GACTCTTACCCAAAACAAGGCAGAGCCATTCCTCTGGGACACCAGCACAATAGAATGCAAGTCCATGTCTaGCGCGAGGGTCCCGGTCCC +
Preference number: 4 (lower is better)
Translates to: DSYPKQGRAIPLGHQHNRMQVHV*REGPGP
Trigger: GGGACCGGGACCCTCGCGGCAGACATGGACTTGCAT...TCTATTGTGCTGGTGTCCCAGAGGAATGGCTCTGCCTTGTTTTGGGTAAGAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR GCA 90 bp TTAACAATGAAGGGGAGCAAAGCATACGTGAATGTACTGGAACAGGTCTCAGCAACTTGGCCACCGAGCTaGTGGCGAGGGAGCCCCCGC +
Preference number: 4 (lower is better)
Translates to: LTMKGSKAYVNVLEQVSATWPPS*WRGSPR
Trigger: GCGGGGGCTCCCTCGCCAGCAGCTCGGTGGCCAAGT...TGCTGAGACCTGTTCCAGTACATTCACGTATGCTTTGCTCCCCTTCATTGTTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR GCA 90 bp TTCTGGTGTTATCCGGTCCCTGCTCAGGGCACAAAGACCTCCTCGGTCCACGCTCGTAGGGAAGTTTTCTaGCAATCAGTGGTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: FWCYPVPAQGTKTSSVHARREVF*QSVVPS
Trigger: AGAGGGGACCACTGATTGGCAGAAAACTTCCCTACG...AGCGTGGACCGAGGAGGTCTTTGTGCCCTGAGCAGGGACCGGATAACACCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp TTCTGGTGTTATCCGGTCCCTGCTCAGGGCACAAAGACCTCCTCGGTCCACGCTCAGGCCTCTAGACACTaGCTTATCCCAATATCCAGG +
Preference number: 4 (lower is better)
Translates to: FWCYPVPAQGTKTSSVHAQASRH*LIPISR
Trigger: CCTGGATATTGGGATAAGCCAGTGTCTAGAGGCCTG...AGCGTGGACCGAGGAGGTCTTTGTGCCCTGAGCAGGGACCGGATAACACCAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp TTCTGGTGTTATCCGGTCCCTGCTCAGGGCACAAAGACCTCCTCGGTCCACGCTTTTTCTGCCAATCAGTaGTCCCCTCTGCTCATCAGG +
Preference number: 4 (lower is better)
Translates to: FWCYPVPAQGTKTSSVHAFSANQ*SPLLIR
Trigger: CCTGATGAGCAGAGGGGACCACTGATTGGCAGAAAA...AGCGTGGACCGAGGAGGTCTTTGTGCCCTGAGCAGGGACCGGATAACACCAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR TCA 90 bp TTCTGGTGTTATCCGGTCCCTGCTCAGGGCACAAAGACCTCCTCGGTCCACGCTGGAGCAAAGCATACGTaGATGTACTGGAACAGGTCT +
Preference number: 4 (lower is better)
Translates to: FWCYPVPAQGTKTSSVHAGAKHT*MYWNRS
Trigger: AGACCTGTTCCAGTACATTCACGTATGCTTTGCTCC...AGCGTGGACCGAGGAGGTCTTTGTGCCCTGAGCAGGGACCGGATAACACCAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR GCA 90 bp CAAACACAGATAACAAGTTGGCAAAGATGTGGAGAAATTGGAACCCTTGTGCACACTTGGCCACCGAGCTaGTGGCGAGGGAGCCCCCGC +
Preference number: 4 (lower is better)
Translates to: QTQITSWQRCGEIGTLVHTWPPS*WRGSPR
Trigger: GCGGGGGCTCCCTCGCCAGCAGCTCGGTGGCCAAGT...GTGCACAAGGGTTCCAATTTCTCCACATCTTTGCCAACTTGTTATCTGTGTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR GCA 90 bp GACTCTTACCCAAAACAAGGCAGAGCCATTCCTCTGGGACACCAGCACAATAGATCACTCCTGGAGGGTTaGTGGTGCACCACGGGATGG +
Preference number: 4 (lower is better)
Translates to: DSYPKQGRAIPLGHQHNRSLLEG*WCTTGW
Trigger: CCATCCCGTGGTGCACCAGCAACCCTCCAGGAGTGA...TCTATTGTGCTGGTGTCCCAGAGGAATGGCTCTGCCTTGTTTTGGGTAAGAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR GCA 90 bp TTCTGGTGTTATCCGGTCCCTGCTCAGGGCACAAAGACCTCCTCGGTCCACGCTCAGCCGCGAGCTGATTaGAGAAATTCGAGTCGTAAT +
Preference number: 4 (lower is better)
Translates to: FWCYPVPAQGTKTSSVHAQPRAD*RNSSRN
Trigger: ATTACGACTCGAATTTCTGCAATCAGCTCGCGGCTG...AGCGTGGACCGAGGAGGTCTTTGTGCCCTGAGCAGGGACCGGATAACACCAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515384.2
CDS-3UTR CCA 90 bp GCTAATGGCAGGATAAACGCATCAACCACCATCTGTACTAAAGCAGAGTGTTTCCCACCTCGTCCGGGCTaGCCATCTCTTCCCCGCCTC +
Preference number: 4 (lower is better)
Translates to: ANGRINASTTICTKAECFPPRPG*PSLPRL
Trigger: GAGGCGGGGAAGAGATGGCCAGCCCGGACGAGGTGG...GAAACACTCTGCTTTAGTACAGATGGTGGTTGATGCGTTTATCCTGCCATTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp GACTCTTACCCAAAACAAGGCAGAGCCATTCCTCTGGGACACCAGCACAATAGAGGCTCCTCCTTAGGATaGGGCTCGATGGGAATCCGG +
Preference number: 4 (lower is better)
Translates to: DSYPKQGRAIPLGHQHNRGSSLG*GSMGIR
Trigger: CCGGATTCCCATCGAGCCCCATCCTAAGGAGGAGCC...TCTATTGTGCTGGTGTCCCAGAGGAATGGCTCTGCCTTGTTTTGGGTAAGAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp TTCTGGTGTTATCCGGTCCCTGCTCAGGGCACAAAGACCTCCTCGGTCCACGCTTGCGGACCAGCACTTTaGAAACCGGGATTTTTGTTC +
Preference number: 4 (lower is better)
Translates to: FWCYPVPAQGTKTSSVHACGPAL*KPGFLF
Trigger: GAACAAAAATCCCGGTTTCCAAAGTGCTGGTCCGCA...AGCGTGGACCGAGGAGGTCTTTGTGCCCTGAGCAGGGACCGGATAACACCAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp TTCTGGTGTTATCCGGTCCCTGCTCAGGGCACAAAGACCTCCTCGGTCCACGCTCCATCCACCTTGGCCTaGAAGACCTCACAACTTTTT +
Preference number: 4 (lower is better)
Translates to: FWCYPVPAQGTKTSSVHAPSTLA*KTSQLF
Trigger: AAAAAGTTGTGAGGTCTTCCAGGCCAAGGTGGATGG...AGCGTGGACCGAGGAGGTCTTTGTGCCCTGAGCAGGGACCGGATAACACCAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR GCA 90 bp CAAACACAGATAACAAGTTGGCAAAGATGTGGAGAAATTGGAACCCTTGTGCACGTCCGTCGTGGGTCCTaGTCCTCACCAGCCCCGTCG +
Preference number: 4 (lower is better)
Translates to: QTQITSWQRCGEIGTLVHVRRGS*SSPAPS
Trigger: CGACGGGGCTGGTGAGGAGCAGGACCCACGACGGAC...GTGCACAAGGGTTCCAATTTCTCCACATCTTTGCCAACTTGTTATCTGTGTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR GCA 90 bp TTAACAATGAAGGGGAGCAAAGCATACGTGAATGTACTGGAACAGGTCTCAGCAGCGGCTCCTCCTTCCTaGCGCTCTCCAGCACCAGCA +
Preference number: 4 (lower is better)
Translates to: LTMKGSKAYVNVLEQVSAAAPPS*RSPAPA
Trigger: TGCTGGTGCTGGAGAGCGGCAGGAAGGAGGAGCCGC...TGCTGAGACCTGTTCCAGTACATTCACGTATGCTTTGCTCCCCTTCATTGTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR GCA 90 bp GCTAATGGCAGGATAAACGCATCAACCACCATCTGTACTAAAGCAGAGTGTTTCGCCCCCGCTTTTGTTTaGCGCCGGCCTTGCTCGCGT +
Preference number: 4 (lower is better)
Translates to: ANGRINASTTICTKAECFAPAFV*RRPCSR
Trigger: ACGCGAGCAAGGCCGGCGGCAAACAAAAGCGGGGGC...GAAACACTCTGCTTTAGTACAGATGGTGGTTGATGCGTTTATCCTGCCATTAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR GCA 90 bp CAAACACAGATAACAAGTTGGCAAAGATGTGGAGAAATTGGAACCCTTGTGCACTGGGGCTCGGGTCCCTaGTCCTCGGTCTGGGAGAGC +
Preference number: 4 (lower is better)
Translates to: QTQITSWQRCGEIGTLVHWGSGP*SSVWES
Trigger: GCTCTCCCAGACCGAGGAGCAGGGACCCGAGCCCCA...GTGCACAAGGGTTCCAATTTCTCCACATCTTTGCCAACTTGTTATCTGTGTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR GCA 90 bp CAGTGTATGTGTAATATAGACATTCAAGTCAGGCTGTCTTTGTGCAGAGCTATTAAGCGTCCTCTGCCGTaGGGACCTCCCCGGGCCCCG +
Preference number: 4 (lower is better)
Translates to: QCMCNIDIQVRLSLCRAIKRPLP*GPPRAP
Trigger: CGGGGCCCGGGGAGGTCCGCACGGCAGAGGACGCTT...AATAGCTCTGCACAAAGACAGCCTGACTTGAATGTCTATATTACACATACACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515384.2
CDS-3UTR GCA 90 bp TTTAAAATGGGGAATGGCCTACTTTCTGCTACTGGCTCAATTTGCTTTCCTTTGCCTGGAAGCGTCCTCTaGCGTGCGGACCTCCCCGGG +
Preference number: 4 (lower is better)
Translates to: FKMGNGLLSATGSICFPLPGSVL*RADLPG
Trigger: CCCGGGGAGGTCCGCACGGCAGAGGACGCTTCCAGG...CAAAGGAAAGCAAATTGAGCCAGTAGCAGAAAGTAGGCCATTCCCCATTTTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000515384.2
CDS-3UTR CCA 90 bp GCTAATGGCAGGATAAACGCATCAACCACCATCTGTACTAAAGCAGAGTGTTTCCAGAGCCGGCTTGCCTaGCCCGGGGACATGCTTGTC +
Preference number: 4 (lower is better)
Translates to: ANGRINASTTICTKAECFQSRLA*PGDMLV
Trigger: GACAAGCATGTCCCCGGGCCAGGCAAGCCGGCTCTG...GAAACACTCTGCTTTAGTACAGATGGTGGTTGATGCGTTTATCCTGCCATTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR TCA 90 bp CAAACACAGATAACAAGTTGGCAAAGATGTGGAGAAATTGGAACCCTTGTGCACACTCCAGGCTGGCGGTaGGCGAGCCGGGTAGGATCA +
Preference number: 4 (lower is better)
Translates to: QTQITSWQRCGEIGTLVHTPGWR*ASRVGS
Trigger: TGATCCTACCCGGCTCGCTCACCGCCAGCCTGGAGT...GTGCACAAGGGTTCCAATTTCTCCACATCTTTGCCAACTTGTTATCTGTGTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR TCA 90 bp GCTAATGGCAGGATAAACGCATCAACCACCATCTGTACTAAAGCAGAGTGTTTCCCAAGCCCCGGTTGCTaGCTCTGCGGACCAGCACTT +
Preference number: 4 (lower is better)
Translates to: ANGRINASTTICTKAECFPSPGC*LCGPAL
Trigger: AAGTGCTGGTCCGCAGAGTCAGCAACCGGGGCTTGG...GAAACACTCTGCTTTAGTACAGATGGTGGTTGATGCGTTTATCCTGCCATTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR TCA 90 bp CAAACACAGATAACAAGTTGGCAAAGATGTGGAGAAATTGGAACCCTTGTGCACGGCAGGCCGTTGCTCTaGTGGTGGTCCCAGCCAAGC +
Preference number: 4 (lower is better)
Translates to: QTQITSWQRCGEIGTLVHGRPLL*WWSQPS
Trigger: GCTTGGCTGGGACCACCATCAGAGCAACGGCCTGCC...GTGCACAAGGGTTCCAATTTCTCCACATCTTTGCCAACTTGTTATCTGTGTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR TCA 90 bp TTCTGGTGTTATCCGGTCCCTGCTCAGGGCACAAAGACCTCCTCGGTCCACGCTATCTCCCCAAACAAATaGCTGAAACCAACCAAACCA +
Preference number: 4 (lower is better)
Translates to: FWCYPVPAQGTKTSSVHAISPNK*LKPTKP
Trigger: TGGTTTGGTTGGTTTCAGTCATTTGTTTGGGGAGAT...AGCGTGGACCGAGGAGGTCTTTGTGCCCTGAGCAGGGACCGGATAACACCAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR GCA 90 bp CAGTGTATGTGTAATATAGACATTCAAGTCAGGCTGTCTTTGTGCAGAGCTATTCCTCCGCCTTCCTCCTaGAGACCCCCACGGACGCGC +
Preference number: 4 (lower is better)
Translates to: QCMCNIDIQVRLSLCRAIPPPSS*RPPRTR
Trigger: GCGCGTCCGTGGGGGTCTGCAGGAGGAAGGCGGAGG...AATAGCTCTGCACAAAGACAGCCTGACTTGAATGTCTATATTACACATACACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp CAAACACAGATAACAAGTTGGCAAAGATGTGGAGAAATTGGAACCCTTGTGCACCGCTTTCGTCAGCAGTaGGCTCGCGCCAGGCCACTG +
Preference number: 4 (lower is better)
Translates to: QTQITSWQRCGEIGTLVHRFRQQ*ARARPL
Trigger: CAGTGGCCTGGCGCGAGCCCACTGCTGACGAAAGCG...GTGCACAAGGGTTCCAATTTCTCCACATCTTTGCCAACTTGTTATCTGTGTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp GCTAATGGCAGGATAAACGCATCAACCACCATCTGTACTAAAGCAGAGTGTTTCTCGGCAAGTCCGTCGTaGGTCCTGCTCCTCACCAGC +
Preference number: 4 (lower is better)
Translates to: ANGRINASTTICTKAECFSASPS*VLLLTS
Trigger: GCTGGTGAGGAGCAGGACCCACGACGGACTTGCCGA...GAAACACTCTGCTTTAGTACAGATGGTGGTTGATGCGTTTATCCTGCCATTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp TTAACAATGAAGGGGAGCAAAGCATACGTGAATGTACTGGAACAGGTCTCAGCAAGCCCTCGTCGCTGTTaGGGACGCCTTCCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: LTMKGSKAYVNVLEQVSASPRRC*GRLPAA
Trigger: AGCAGCAGGAAGGCGTCCCCAACAGCGACGAGGGCT...TGCTGAGACCTGTTCCAGTACATTCACGTATGCTTTGCTCCCCTTCATTGTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp CAAACACAGATAACAAGTTGGCAAAGATGTGGAGAAATTGGAACCCTTGTGCACCTGGGCCTGGCGTGGTaGAGTCCCAGTAGCCCTCGT +
Preference number: 4 (lower is better)
Translates to: QTQITSWQRCGEIGTLVHLGLAW*SPSSPR
Trigger: ACGAGGGCTACTGGGACTCCACCACGCCAGGCCCAG...GTGCACAAGGGTTCCAATTTCTCCACATCTTTGCCAACTTGTTATCTGTGTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp GACTCTTACCCAAAACAAGGCAGAGCCATTCCTCTGGGACACCAGCACAATAGATTGTATTCCTTGGCATaGGGCCCATCCACCTTGGCC +
Preference number: 4 (lower is better)
Translates to: DSYPKQGRAIPLGHQHNRLYSLA*GPSTLA
Trigger: GGCCAAGGTGGATGGGCCCCATGCCAAGGAATACAA...TCTATTGTGCTGGTGTCCCAGAGGAATGGCTCTGCCTTGTTTTGGGTAAGAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR TCA 90 bp GCTAATGGCAGGATAAACGCATCAACCACCATCTGTACTAAAGCAGAGTGTTTCTATTCTAAATCAACCTaGGCCGCGCTCGCCGCCGCC +
Preference number: 4 (lower is better)
Translates to: ANGRINASTTICTKAECFYSKST*AALAAA
Trigger: GGCGGCGGCGAGCGCGGCTCAGGTTGATTTAGAATA...GAAACACTCTGCTTTAGTACAGATGGTGGTTGATGCGTTTATCCTGCCATTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR TCA 90 bp TTCCCATTACAGTACATAACAGAACATCAATGGTTTGGGGACCATCATCATGTCACTCCAGGCTGGCGGTaGGCGAGCCGGGTAGGATCA +
Preference number: 4 (lower is better)
Translates to: FPLQYITEHQWFGDHHHVTPGWR*ASRVGS
Trigger: TGATCCTACCCGGCTCGCTCACCGCCAGCCTGGAGT...GACATGATGATGGTCCCCAAACCATTGATGTTCTGTTATGTACTGTAATGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR TCA 90 bp CAGTGTATGTGTAATATAGACATTCAAGTCAGGCTGTCTTTGTGCAGAGCTATTTGGGCGTCTCCTCCTTaGCGCACTCCAGGCTGGCGG +
Preference number: 4 (lower is better)
Translates to: QCMCNIDIQVRLSLCRAIWASPP*RTPGWR
Trigger: CCGCCAGCCTGGAGTGCGTCAAGGAGGAGACGCCCA...AATAGCTCTGCACAAAGACAGCCTGACTTGAATGTCTATATTACACATACACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR TCA 90 bp TTCTGGTGTTATCCGGTCCCTGCTCAGGGCACAAAGACCTCCTCGGTCCACGCTATGTGCAGTTTCACGTaGATATGCATAATCTTCCTG +
Preference number: 4 (lower is better)
Translates to: FWCYPVPAQGTKTSSVHAMCSFT*ICIIFL
Trigger: CAGGAAGATTATGCATATTCACGTGAAACTGCACAT...AGCGTGGACCGAGGAGGTCTTTGTGCCCTGAGCAGGGACCGGATAACACCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR GCA 90 bp GACTCTTACCCAAAACAAGGCAGAGCCATTCCTCTGGGACACCAGCACAATAGACACACGCTAGGTCCATaGTGTGTGGCTGTCATTGTG +
Preference number: 4 (lower is better)
Translates to: DSYPKQGRAIPLGHQHNRHTLGP*CVAVIV
Trigger: CACAATGACAGCCACACAGCATGGACCTAGCGTGTG...TCTATTGTGCTGGTGTCCCAGAGGAATGGCTCTGCCTTGTTTTGGGTAAGAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR GCA 90 bp ACATTCAAGTCAGGCTGTCTTTGTGCAGAGCTATTAAACCAACCGATAAATTTTCCTCCGCCTTCCTCCTaGAGACCCCCACGGACGCGC +
Preference number: 4 (lower is better)
Translates to: TFKSGCLCAELLNQPINFPPPSS*RPPRTR
Trigger: GCGCGTCCGTGGGGGTCTGCAGGAGGAAGGCGGAGG...AAAATTTATCGGTTGGTTTAATAGCTCTGCACAAAGACAGCCTGACTTGAATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR GCA 90 bp CAAACACAGATAACAAGTTGGCAAAGATGTGGAGAAATTGGAACCCTTGTGCACATGCAAGTCCATGTCTaGCGCGAGGGTCCCGGTCCC +
Preference number: 4 (lower is better)
Translates to: QTQITSWQRCGEIGTLVHMQVHV*REGPGP
Trigger: GGGACCGGGACCCTCGCGGCAGACATGGACTTGCAT...GTGCACAAGGGTTCCAATTTCTCCACATCTTTGCCAACTTGTTATCTGTGTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR GCA 90 bp TTCCCATTACAGTACATAACAGAACATCAATGGTTTGGGGACCATCATCATGTCGCCCCCGCTTTTGTTTaGCGCCGGCCTTGCTCGCGT +
Preference number: 4 (lower is better)
Translates to: FPLQYITEHQWFGDHHHVAPAFV*RRPCSR
Trigger: ACGCGAGCAAGGCCGGCGGCAAACAAAAGCGGGGGC...GACATGATGATGGTCCCCAAACCATTGATGTTCTGTTATGTACTGTAATGGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR GCA 90 bp TTTAAAATGGGGAATGGCCTACTTTCTGCTACTGGCTCAATTTGCTTTCCTTTGGGTTTCCAGCGCAGCTaGCACCTTAGCCGCGCCCTC +
Preference number: 4 (lower is better)
Translates to: FKMGNGLLSATGSICFPLGFQRS*HLSRAL
Trigger: GAGGGCGCGGCTAAGGTGGCAGCTGCGCTGGAAACC...CAAAGGAAAGCAAATTGAGCCAGTAGCAGAAAGTAGGCCATTCCCCATTTTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR GCA 90 bp GACTCTTACCCAAAACAAGGCAGAGCCATTCCTCTGGGACACCAGCACAATAGAGAATGCATTCCGCCATaGGGACAGAGCCAACATGCT +
Preference number: 4 (lower is better)
Translates to: DSYPKQGRAIPLGHQHNRECIPP*GQSQHA
Trigger: AGCATGTTGGCTCTGTCCGCATGGCGGAATGCATTC...TCTATTGTGCTGGTGTCCCAGAGGAATGGCTCTGCCTTGTTTTGGGTAAGAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR GCA 90 bp TTCTGGTGTTATCCGGTCCCTGCTCAGGGCACAAAGACCTCCTCGGTCCACGCTAAAAGAAGGAAATCCTaGCATAAGCAACAACATGGC +
Preference number: 4 (lower is better)
Translates to: FWCYPVPAQGTKTSSVHAKRRKS*HKQQHG
Trigger: GCCATGTTGTTGCTTATGGCAGGATTTCCTTCTTTT...AGCGTGGACCGAGGAGGTCTTTGTGCCCTGAGCAGGGACCGGATAACACCAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp CAAACACAGATAACAAGTTGGCAAAGATGTGGAGAAATTGGAACCCTTGTGCACTCGGCAAGTCCGTCGTaGGTCCTGCTCCTCACCAGC +
Preference number: 4 (lower is better)
Translates to: QTQITSWQRCGEIGTLVHSASPS*VLLLTS
Trigger: GCTGGTGAGGAGCAGGACCCACGACGGACTTGCCGA...GTGCACAAGGGTTCCAATTTCTCCACATCTTTGCCAACTTGTTATCTGTGTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp TTCCCATTACAGTACATAACAGAACATCAATGGTTTGGGGACCATCATCATGTCCCGCGGCCTCCGCCTTaGCCCGCTTGTCTTTCCTGT +
Preference number: 4 (lower is better)
Translates to: FPLQYITEHQWFGDHHHVPRPPP*PACLSC
Trigger: ACAGGAAAGACAAGCGGGCCAAGGCGGAGGCCGCGG...GACATGATGATGGTCCCCAAACCATTGATGTTCTGTTATGTACTGTAATGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp GCTAATGGCAGGATAAACGCATCAACCACCATCTGTACTAAAGCAGAGTGTTTCTCTCGGGCACCACCTTaGTTTCCAGCGCAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: ANGRINASTTICTKAECFSRAPP*FPAQLP
Trigger: TGGCAGCTGCGCTGGAAACCAAGGTGGTGCCCGAGA...GAAACACTCTGCTTTAGTACAGATGGTGGTTGATGCGTTTATCCTGCCATTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp TTAACAATGAAGGGGAGCAAAGCATACGTGAATGTACTGGAACAGGTCTCAGCACACACCTGGTGTCTTTaGGGGTCTCGGGCACCACCT +
Preference number: 4 (lower is better)
Translates to: LTMKGSKAYVNVLEQVSAHTWCL*GSRAPP
Trigger: AGGTGGTGCCCGAGACCCCCAAAGACACCAGGTGTG...TGCTGAGACCTGTTCCAGTACATTCACGTATGCTTTGCTCCCCTTCATTGTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp CAAACACAGATAACAAGTTGGCAAAGATGTGGAGAAATTGGAACCCTTGTGCACAGCCCTCGTCGCTGTTaGGGACGCCTTCCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: QTQITSWQRCGEIGTLVHSPRRC*GRLPAA
Trigger: AGCAGCAGGAAGGCGTCCCCAACAGCGACGAGGGCT...GTGCACAAGGGTTCCAATTTCTCCACATCTTTGCCAACTTGTTATCTGTGTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp CAAACACAGATAACAAGTTGGCAAAGATGTGGAGAAATTGGAACCCTTGTGCACCGAGCTGTCTTCCTCTaGGCCTGGCGTGGTGGAGTC +
Preference number: 4 (lower is better)
Translates to: QTQITSWQRCGEIGTLVHRAVFL*AWRGGV
Trigger: GACTCCACCACGCCAGGCCCAGAGGAAGACAGCTCG...GTGCACAAGGGTTCCAATTTCTCCACATCTTTGCCAACTTGTTATCTGTGTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp GACTCTTACCCAAAACAAGGCAGAGCCATTCCTCTGGGACACCAGCACAATAGACACGGGATGGCTAGATaGAAGGTTGGTCAGGTGCTT +
Preference number: 4 (lower is better)
Translates to: DSYPKQGRAIPLGHQHNRHGMAR*KVGQVL
Trigger: AAGCACCTGACCAACCTTCCATCTAGCCATCCCGTG...TCTATTGTGCTGGTGTCCCAGAGGAATGGCTCTGCCTTGTTTTGGGTAAGAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp TTAACAATGAAGGGGAGCAAAGCATACGTGAATGTACTGGAACAGGTCTCAGCACTCCTGGAGGGTTGCTaGTGCACCACGGGATGGCTA +
Preference number: 4 (lower is better)
Translates to: LTMKGSKAYVNVLEQVSALLEGC*CTTGWL
Trigger: TAGCCATCCCGTGGTGCACCAGCAACCCTCCAGGAG...TGCTGAGACCTGTTCCAGTACATTCACGTATGCTTTGCTCCCCTTCATTGTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp GACTCTTACCCAAAACAAGGCAGAGCCATTCCTCTGGGACACCAGCACAATAGATTTTTGGCACTGTCGTaGCAGGCCGTTGCTCTGATG +
Preference number: 4 (lower is better)
Translates to: DSYPKQGRAIPLGHQHNRFLALS*QAVALM
Trigger: CATCAGAGCAACGGCCTGCCACGACAGTGCCAAAAA...TCTATTGTGCTGGTGTCCCAGAGGAATGGCTCTGCCTTGTTTTGGGTAAGAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp TTCTGGTGTTATCCGGTCCCTGCTCAGGGCACAAAGACCTCCTCGGTCCACGCTCCTACTTTCTGCTACTaGCTCAATTTGCTTTCCTTT +
Preference number: 4 (lower is better)
Translates to: FWCYPVPAQGTKTSSVHAPTFCY*LNLLSF
Trigger: AAAGGAAAGCAAATTGAGCCAGTAGCAGAAAGTAGG...AGCGTGGACCGAGGAGGTCTTTGTGCCCTGAGCAGGGACCGGATAACACCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp TTCTGGTGTTATCCGGTCCCTGCTCAGGGCACAAAGACCTCCTCGGTCCACGCTACACAGCATCCTCTCTaGCAACATAGTAAACATACA +
Preference number: 4 (lower is better)
Translates to: FWCYPVPAQGTKTSSVHATQHPL*QHSKHT
Trigger: TGTATGTTTACTATGTTGCCAGAGAGGATGCTGTGT...AGCGTGGACCGAGGAGGTCTTTGTGCCCTGAGCAGGGACCGGATAACACCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp GCTAATGGCAGGATAAACGCATCAACCACCATCTGTACTAAAGCAGAGTGTTTCCACTTCCATCCGACTTaGCTCGGCGCTGCATGGCGT +
Preference number: 4 (lower is better)
Translates to: ANGRINASTTICTKAECFHFHPT*LGAAWR
Trigger: ACGCCATGCAGCGCCGAGCCAAGTCGGATGGAAGTG...GAAACACTCTGCTTTAGTACAGATGGTGGTTGATGCGTTTATCCTGCCATTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515384.2
CDS-3UTR TCA 90 bp TTAACAATGAAGGGGAGCAAAGCATACGTGAATGTACTGGAACAGGTCTCAGCATTCGCAGTGGACAGGTaGTGGTGCCTGGAGATACGG +
Preference number: 4 (lower is better)
Translates to: LTMKGSKAYVNVLEQVSAFAVDR*WCLEIR
Trigger: CCGTATCTCCAGGCACCATCACCTGTCCACTGCGAA...TGCTGAGACCTGTTCCAGTACATTCACGTATGCTTTGCTCCCCTTCATTGTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR TCA 90 bp TTCTGGTGTTATCCGGTCCCTGCTCAGGGCACAAAGACCTCCTCGGTCCACGCTCAATCTCTCTGGAAATaGGACTTATACAGAAGTGTT +
Preference number: 4 (lower is better)
Translates to: FWCYPVPAQGTKTSSVHAQSLWK*DLYRSV
Trigger: AACACTTCTGTATAAGTCTCATTTCCAGAGAGATTG...AGCGTGGACCGAGGAGGTCTTTGTGCCCTGAGCAGGGACCGGATAACACCAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR GCA 90 bp GCTAATGGCAGGATAAACGCATCAACCACCATCTGTACTAAAGCAGAGTGTTTCAGCGAGAAGAAGCTGTaGGACTTGGCCACCGAGCTG +
Preference number: 4 (lower is better)
Translates to: ANGRINASTTICTKAECFSEKKL*DLATEL
Trigger: CAGCTCGGTGGCCAAGTCGCACAGCTTCTTCTCGCT...GAAACACTCTGCTTTAGTACAGATGGTGGTTGATGCGTTTATCCTGCCATTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR GCA 90 bp TTTAAAATGGGGAATGGCCTACTTTCTGCTACTGGCTCAATTTGCTTTCCTTTGCCACAGGCTCTCCCTTaGCGTTTTCCGAGCGCCCGT +
Preference number: 4 (lower is better)
Translates to: FKMGNGLLSATGSICFPLPQALP*RFPSAR
Trigger: ACGGGCGCTCGGAAAACGGCAAGGGAGAGCCTGTGG...CAAAGGAAAGCAAATTGAGCCAGTAGCAGAAAGTAGGCCATTCCCCATTTTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR GCA 90 bp TTCCCATTACAGTACATAACAGAACATCAATGGTTTGGGGACCATCATCATGTCGGGACGCCTTCCTGCTaGTCCTTCTCCGGGTGCTTG +
Preference number: 4 (lower is better)
Translates to: FPLQYITEHQWFGDHHHVGTPSC*SFSGCL
Trigger: CAAGCACCCGGAGAAGGAGCAGCAGGAAGGCGTCCC...GACATGATGATGGTCCCCAAACCATTGATGTTCTGTTATGTACTGTAATGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR GCA 90 bp CAGTGTATGTGTAATATAGACATTCAAGTCAGGCTGTCTTTGTGCAGAGCTATTAGCTATCCCGGGGGATaGCCGCCTTCTTCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: QCMCNIDIQVRLSLCRAISYPGG*PPSSRC
Trigger: GCAGCGGGAAGAAGGCGGGCATCCCCCGGGATAGCT...AATAGCTCTGCACAAAGACAGCCTGACTTGAATGTCTATATTACACATACACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR GCA 90 bp TTCCCATTACAGTACATAACAGAACATCAATGGTTTGGGGACCATCATCATGTCGTCGTGGCAGGCCGTTaGTCTGATGGTGGTCCCAGC +
Preference number: 4 (lower is better)
Translates to: FPLQYITEHQWFGDHHHVVVAGR*SDGGPS
Trigger: GCTGGGACCACCATCAGAGCAACGGCCTGCCACGAC...GACATGATGATGGTCCCCAAACCATTGATGTTCTGTTATGTACTGTAATGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp CAGTGTATGTGTAATATAGACATTCAAGTCAGGCTGTCTTTGTGCAGAGCTATTCAGAGCCGGCTTGCCTaGCCCGGGGACATGCTTGTC +
Preference number: 4 (lower is better)
Translates to: QCMCNIDIQVRLSLCRAIQSRLA*PGDMLV
Trigger: GACAAGCATGTCCCCGGGCCAGGCAAGCCGGCTCTG...AATAGCTCTGCACAAAGACAGCCTGACTTGAATGTCTATATTACACATACACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp CAAACACAGATAACAAGTTGGCAAAGATGTGGAGAAATTGGAACCCTTGTGCACGTCTTCCTCTGGGCCTaGCGTGGTGGAGTCCCAGTA +
Preference number: 4 (lower is better)
Translates to: QTQITSWQRCGEIGTLVHVFLWA*RGGVPV
Trigger: TACTGGGACTCCACCACGCCAGGCCCAGAGGAAGAC...GTGCACAAGGGTTCCAATTTCTCCACATCTTTGCCAACTTGTTATCTGTGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp CAAACACAGATAACAAGTTGGCAAAGATGTGGAGAAATTGGAACCCTTGTGCACGCCTGGTGTTCGCAGTaGACAGGTGATGGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: QTQITSWQRCGEIGTLVHAWCSQ*TGDGAW
Trigger: CCAGGCACCATCACCTGTCCACTGCGAACACCAGGC...GTGCACAAGGGTTCCAATTTCTCCACATCTTTGCCAACTTGTTATCTGTGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR TCA 90 bp ATGTCATTTACATATGTGCAGTTTCACGTGAATATGCATAATCTTCCTGGTATGTGGGCGTCTCCTCCTTaGCGCACTCCAGGCTGGCGG +
Preference number: 4 (lower is better)
Translates to: MSFTYVQFHVNMHNLPGMWASPP*RTPGWR
Trigger: CCGCCAGCCTGGAGTGCGTCAAGGAGGAGACGCCCA...CATACCAGGAAGATTATGCATATTCACGTGAAACTGCACATATGTAAATGACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR TCA 90 bp GACTCTTACCCAAAACAAGGCAGAGCCATTCCTCTGGGACACCAGCACAATAGACCCAATATCCAGGCATaGCTCTTACTTAGGTTTGGC +
Preference number: 4 (lower is better)
Translates to: DSYPKQGRAIPLGHQHNRPNIQA*LLLRFG
Trigger: GCCAAACCTAAGTAAGAGTCATGCCTGGATATTGGG...TCTATTGTGCTGGTGTCCCAGAGGAATGGCTCTGCCTTGTTTTGGGTAAGAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR GCA 90 bp TGGCACAAGAAAGCAACTATGATCCCTTTTCTATGGTTGGAAAAAGTTGAGAATGTTTGCCGCCGGCCTTaGTCGCGTCCACAGGCTCTC +
Preference number: 4 (lower is better)
Translates to: WHKKATMIPFLWLEKVENVCRRP*SRPQAL
Trigger: GAGAGCCTGTGGACGCGAGCAAGGCCGGCGGCAAAC...ATTCTCAACTTTTTCCAACCATAGAAAAGGGATCATAGTTGCTTTCTTGTGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR GCA 90 bp CAAACACAGATAACAAGTTGGCAAAGATGTGGAGAAATTGGAACCCTTGTGCACCGCTTGTCTTTCCTGTaGCAGCGCATGCCGCTGAAC +
Preference number: 4 (lower is better)
Translates to: QTQITSWQRCGEIGTLVHRLSFL*QRMPLN
Trigger: GTTCAGCGGCATGCGCTGGCACAGGAAAGACAAGCG...GTGCACAAGGGTTCCAATTTCTCCACATCTTTGCCAACTTGTTATCTGTGTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR GCA 90 bp TTTAAAATGGGGAATGGCCTACTTTCTGCTACTGGCTCAATTTGCTTTCCTTTGCCGCCTTCTTCCCGCTaGTCGAGCTGTCTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: FKMGNGLLSATGSICFPLPPSSR*SSCLPL
Trigger: CAGAGGAAGACAGCTCGAGCAGCGGGAAGAAGGCGG...CAAAGGAAAGCAAATTGAGCCAGTAGCAGAAAGTAGGCCATTCCCCATTTTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR GCA 90 bp TTTGACTTTTTCCTGTCTAATTTGGGCAGCCTTTCAACTAAAGGAAGTCAATCAAGCTATCCCGGGGGATaGCCGCCTTCTTCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: FDFFLSNLGSLSTKGSQSSYPGG*PPSSRC
Trigger: GCAGCGGGAAGAAGGCGGGCATCCCCCGGGATAGCT...TGATTGACTTCCTTTAGTTGAAAGGCTGCCCAAATTAGACAGGAAAAAGTCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR GCA 90 bp GACTCTTACCCAAAACAAGGCAGAGCCATTCCTCTGGGACACCAGCACAATAGAGGAAGGTTGGTCAGGTaGTTGATGCTAATAGGGATC +
Preference number: 4 (lower is better)
Translates to: DSYPKQGRAIPLGHQHNRGRLVR*LMLIGI
Trigger: GATCCCTATTAGCATCAAGCACCTGACCAACCTTCC...TCTATTGTGCTGGTGTCCCAGAGGAATGGCTCTGCCTTGTTTTGGGTAAGAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR GCA 90 bp GACTCTTACCCAAAACAAGGCAGAGCCATTCCTCTGGGACACCAGCACAATAGAAGAATCTACTCTTCCTaGCACTCCAGGGATTTCCCA +
Preference number: 4 (lower is better)
Translates to: DSYPKQGRAIPLGHQHNRRIYSS*HSRDFP
Trigger: TGGGAAATCCCTGGAGTGGCAGGAAGAGTAGATTCT...TCTATTGTGCTGGTGTCCCAGAGGAATGGCTCTGCCTTGTTTTGGGTAAGAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp TGGCACAAGAAAGCAACTATGATCCCTTTTCTATGGTTGGAAAAAGTTGAGAATCGCTTTCGTCAGCAGTaGGCTCGCGCCAGGCCACTG +
Preference number: 4 (lower is better)
Translates to: WHKKATMIPFLWLEKVENRFRQQ*ARARPL
Trigger: CAGTGGCCTGGCGCGAGCCCACTGCTGACGAAAGCG...ATTCTCAACTTTTTCCAACCATAGAAAAGGGATCATAGTTGCTTTCTTGTGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp ACATTCAAGTCAGGCTGTCTTTGTGCAGAGCTATTAAACCAACCGATAAATTTTATCTCCACAGCCTGCTaGGTCTCGCGGGGCGTCCTG +
Preference number: 4 (lower is better)
Translates to: TFKSGCLCAELLNQPINFISTAC*VSRGVL
Trigger: CAGGACGCCCCGCGAGACCCAGCAGGCTGTGGAGAT...AAAATTTATCGGTTGGTTTAATAGCTCTGCACAAAGACAGCCTGACTTGAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357816.2
CDS-3UTR CCA 90 bp ATGTCATTTACATATGTGCAGTTTCACGTGAATATGCATAATCTTCCTGGTATGCCACCTCGTCCGGGCTaGCCATCTCTTCCCCGCCTC +
Preference number: 4 (lower is better)
Translates to: MSFTYVQFHVNMHNLPGMPPRPG*PSLPRL
Trigger: GAGGCGGGGAAGAGATGGCCAGCCCGGACGAGGTGG...CATACCAGGAAGATTATGCATATTCACGTGAAACTGCACATATGTAAATGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp TTTAAAATGGGGAATGGCCTACTTTCTGCTACTGGCTCAATTTGCTTTCCTTTGGGCTCCTCCTTAGGATaGGGCTCGATGGGAATCCGG +
Preference number: 4 (lower is better)
Translates to: FKMGNGLLSATGSICFPLGSSLG*GSMGIR
Trigger: CCGGATTCCCATCGAGCCCCATCCTAAGGAGGAGCC...CAAAGGAAAGCAAATTGAGCCAGTAGCAGAAAGTAGGCCATTCCCCATTTTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp TTTGACTTTTTCCTGTCTAATTTGGGCAGCCTTTCAACTAAAGGAAGTCAATCACTGGGCCTGGCGTGGTaGAGTCCCAGTAGCCCTCGT +
Preference number: 4 (lower is better)
Translates to: FDFFLSNLGSLSTKGSQSLGLAW*SPSSPR
Trigger: ACGAGGGCTACTGGGACTCCACCACGCCAGGCCCAG...TGATTGACTTCCTTTAGTTGAAAGGCTGCCCAAATTAGACAGGAAAAAGTCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp TGGCACAAGAAAGCAACTATGATCCCTTTTCTATGGTTGGAAAAAGTTGAGAATCCTCTGGGCCTGGCGTaGTGGAGTCCCAGTAGCCCT +
Preference number: 4 (lower is better)
Translates to: WHKKATMIPFLWLEKVENPLGLA*WSPSSP
Trigger: AGGGCTACTGGGACTCCACCACGCCAGGCCCAGAGG...ATTCTCAACTTTTTCCAACCATAGAAAAGGGATCATAGTTGCTTTCTTGTGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp TTCCCATTACAGTACATAACAGAACATCAATGGTTTGGGGACCATCATCATGTCGTCTTCCTCTGGGCCTaGCGTGGTGGAGTCCCAGTA +
Preference number: 4 (lower is better)
Translates to: FPLQYITEHQWFGDHHHVVFLWA*RGGVPV
Trigger: TACTGGGACTCCACCACGCCAGGCCCAGAGGAAGAC...GACATGATGATGGTCCCCAAACCATTGATGTTCTGTTATGTACTGTAATGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp TTCCCATTACAGTACATAACAGAACATCAATGGTTTGGGGACCATCATCATGTCTCCAGGAAGGGTTGCTaGACTTCCGTCCGGGTCAGC +
Preference number: 4 (lower is better)
Translates to: FPLQYITEHQWFGDHHHVSRKGC*TSVRVS
Trigger: GCTGACCCGGACGGAAGTCCAGCAACCCTTCCTGGA...GACATGATGATGGTCCCCAAACCATTGATGTTCTGTTATGTACTGTAATGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp TTAACAATGAAGGGGAGCAAAGCATACGTGAATGTACTGGAACAGGTCTCAGCATGGTGCACCACGGGATaGCTAGATGGAAGGTTGGTC +
Preference number: 4 (lower is better)
Translates to: LTMKGSKAYVNVLEQVSAWCTTG*LDGRLV
Trigger: GACCAACCTTCCATCTAGCCATCCCGTGGTGCACCA...TGCTGAGACCTGTTCCAGTACATTCACGTATGCTTTGCTCCCCTTCATTGTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp CAAACACAGATAACAAGTTGGCAAAGATGTGGAGAAATTGGAACCCTTGTGCACTGGGCATCTCACTCCTaGAGGGTTGCTGGTGCACCA +
Preference number: 4 (lower is better)
Translates to: QTQITSWQRCGEIGTLVHWASHS*RVAGAP
Trigger: TGGTGCACCAGCAACCCTCCAGGAGTGAGATGCCCA...GTGCACAAGGGTTCCAATTTCTCCACATCTTTGCCAACTTGTTATCTGTGTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp TTTAAAATGGGGAATGGCCTACTTTCTGCTACTGGCTCAATTTGCTTTCCTTTGGGGGCCCATCCACCTTaGCCTGGAAGACCTCACAAC +
Preference number: 4 (lower is better)
Translates to: FKMGNGLLSATGSICFPLGAHPP*PGRPHN
Trigger: GTTGTGAGGTCTTCCAGGCCAAGGTGGATGGGCCCC...CAAAGGAAAGCAAATTGAGCCAGTAGCAGAAAGTAGGCCATTCCCCATTTTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR TCA 90 bp CAAACACAGATAACAAGTTGGCAAAGATGTGGAGAAATTGGAACCCTTGTGCACTGTCTTGTCCAGAGCTaGGCACACGCTAGGTCCATG +
Preference number: 4 (lower is better)
Translates to: QTQITSWQRCGEIGTLVHCLVQS*AHARSM
Trigger: CATGGACCTAGCGTGTGCTCAGCTCTGGACAAGACA...GTGCACAAGGGTTCCAATTTCTCCACATCTTTGCCAACTTGTTATCTGTGTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR TCA 90 bp CAAACACAGATAACAAGTTGGCAAAGATGTGGAGAAATTGGAACCCTTGTGCACCATGCTAGCGTCATGTaGAGTGTCCCGTCACTGCTG +
Preference number: 4 (lower is better)
Translates to: QTQITSWQRCGEIGTLVHHASVM*SVPSLL
Trigger: CAGCAGTGACGGGACACTTCACATGACGCTAGCATG...GTGCACAAGGGTTCCAATTTCTCCACATCTTTGCCAACTTGTTATCTGTGTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR TCA 90 bp TTAACAATGAAGGGGAGCAAAGCATACGTGAATGTACTGGAACAGGTCTCAGCAGGTGGGCAGATCATTTaGGGTCAGGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: LTMKGSKAYVNVLEQVSAGGQII*GQEFET
Trigger: GGTCTCAAACTCCTGACCTCAAATGATCTGCCCACC...TGCTGAGACCTGTTCCAGTACATTCACGTATGCTTTGCTCCCCTTCATTGTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR TCA 90 bp TTTGACTTTTTCCTGTCTAATTTGGGCAGCCTTTCAACTAAAGGAAGTCAATCAATCTGCCGACGGGTCTaGGGGTGGATCGACAGAGGC +
Preference number: 4 (lower is better)
Translates to: FDFFLSNLGSLSTKGSQSICRRV*GWIDRG
Trigger: GCCTCTGTCGATCCACCCTCAGACCCGTCGGCAGAT...TGATTGACTTCCTTTAGTTGAAAGGCTGCCCAAATTAGACAGGAAAAAGTCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515384.2
CDS-3UTR GCA 90 bp TTTAAAATGGGGAATGGCCTACTTTCTGCTACTGGCTCAATTTGCTTTCCTTTGGCGGCACAGTCACAATaGAAGTCCATGTCTGCCGCG +
Preference number: 4 (lower is better)
Translates to: FKMGNGLLSATGSICFPLAAQSQ*KSMSAA
Trigger: CGCGGCAGACATGGACTTGCATTGTGACTGTGCCGC...CAAAGGAAAGCAAATTGAGCCAGTAGCAGAAAGTAGGCCATTCCCCATTTTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR GCA 90 bp TTCCCATTACAGTACATAACAGAACATCAATGGTTTGGGGACCATCATCATGTCAGCGAGAAGAAGCTGTaGGACTTGGCCACCGAGCTG +
Preference number: 4 (lower is better)
Translates to: FPLQYITEHQWFGDHHHVSEKKL*DLATEL
Trigger: CAGCTCGGTGGCCAAGTCGCACAGCTTCTTCTCGCT...GACATGATGATGGTCCCCAAACCATTGATGTTCTGTTATGTACTGTAATGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR GCA 90 bp TGGCACAAGAAAGCAACTATGATCCCTTTTCTATGGTTGGAAAAAGTTGAGAATCCACAGGCTCTCCCTTaGCGTTTTCCGAGCGCCCGT +
Preference number: 4 (lower is better)
Translates to: WHKKATMIPFLWLEKVENPQALP*RFPSAR
Trigger: ACGGGCGCTCGGAAAACGGCAAGGGAGAGCCTGTGG...ATTCTCAACTTTTTCCAACCATAGAAAAGGGATCATAGTTGCTTTCTTGTGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR GCA 90 bp ATGTCATTTACATATGTGCAGTTTCACGTGAATATGCATAATCTTCCTGGTATGGTTTGCCGCCGGCCTTaGTCGCGTCCACAGGCTCTC +
Preference number: 4 (lower is better)
Translates to: MSFTYVQFHVNMHNLPGMVCRRP*SRPQAL
Trigger: GAGAGCCTGTGGACGCGAGCAAGGCCGGCGGCAAAC...CATACCAGGAAGATTATGCATATTCACGTGAAACTGCACATATGTAAATGACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR GCA 90 bp TTTGACTTTTTCCTGTCTAATTTGGGCAGCCTTTCAACTAAAGGAAGTCAATCACCTGGCCCGGGGACATaGTTGTCACAGCTGGGACCT +
Preference number: 4 (lower is better)
Translates to: FDFFLSNLGSLSTKGSQSPGPGT*LSQLGP
Trigger: AGGTCCCAGCTGTGACAAGCATGTCCCCGGGCCAGG...TGATTGACTTCCTTTAGTTGAAAGGCTGCCCAAATTAGACAGGAAAAAGTCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR GCA 90 bp TTTGACTTTTTCCTGTCTAATTTGGGCAGCCTTTCAACTAAAGGAAGTCAATCAGGGACGCCTTCCTGCTaGTCCTTCTCCGGGTGCTTG +
Preference number: 4 (lower is better)
Translates to: FDFFLSNLGSLSTKGSQSGTPSC*SFSGCL
Trigger: CAAGCACCCGGAGAAGGAGCAGCAGGAAGGCGTCCC...TGATTGACTTCCTTTAGTTGAAAGGCTGCCCAAATTAGACAGGAAAAAGTCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR GCA 90 bp TGGCACAAGAAAGCAACTATGATCCCTTTTCTATGGTTGGAAAAAGTTGAGAATTTGGGGACGCCTTCCTaGTGCTCCTTCTCCGGGTGC +
Preference number: 4 (lower is better)
Translates to: WHKKATMIPFLWLEKVENLGTPS*CSFSGC
Trigger: GCACCCGGAGAAGGAGCAGCAGGAAGGCGTCCCCAA...ATTCTCAACTTTTTCCAACCATAGAAAAGGGATCATAGTTGCTTTCTTGTGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR GCA 90 bp ACATTCAAGTCAGGCTGTCTTTGTGCAGAGCTATTAAACCAACCGATAAATTTTTTGGGGACGCCTTCCTaGTGCTCCTTCTCCGGGTGC +
Preference number: 4 (lower is better)
Translates to: TFKSGCLCAELLNQPINFLGTPS*CSFSGC
Trigger: GCACCCGGAGAAGGAGCAGCAGGAAGGCGTCCCCAA...AAAATTTATCGGTTGGTTTAATAGCTCTGCACAAAGACAGCCTGACTTGAATGT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR GCA 90 bp ACATTCAAGTCAGGCTGTCTTTGTGCAGAGCTATTAAACCAACCGATAAATTTTGTCGTGGCAGGCCGTTaGTCTGATGGTGGTCCCAGC +
Preference number: 4 (lower is better)
Translates to: TFKSGCLCAELLNQPINFVVAGR*SDGGPS
Trigger: GCTGGGACCACCATCAGAGCAACGGCCTGCCACGAC...AAAATTTATCGGTTGGTTTAATAGCTCTGCACAAAGACAGCCTGACTTGAATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR GCA 90 bp TTAACAATGAAGGGGAGCAAAGCATACGTGAATGTACTGGAACAGGTCTCAGCAACTAACAGCAGGGAATaGATTCCGCCATGCGGACAG +
Preference number: 4 (lower is better)
Translates to: LTMKGSKAYVNVLEQVSATNSRE*IPPCGQ
Trigger: CTGTCCGCATGGCGGAATGCATTCCCTGCTGTTAGT...TGCTGAGACCTGTTCCAGTACATTCACGTATGCTTTGCTCCCCTTCATTGTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR GCA 90 bp TTAACAATGAAGGGGAGCAAAGCATACGTGAATGTACTGGAACAGGTCTCAGCATTCTTTTCCTTGCTCTaGCTGGAGGAGGGGAAAGGG +
Preference number: 4 (lower is better)
Translates to: LTMKGSKAYVNVLEQVSAFFSLL*LEEGKG
Trigger: CCCTTTCCCCTCCTCCAGGCAGAGCAAGGAAAAGAA...TGCTGAGACCTGTTCCAGTACATTCACGTATGCTTTGCTCCCCTTCATTGTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp CAGTGTATGTGTAATATAGACATTCAAGTCAGGCTGTCTTTGTGCAGAGCTATTTCCGGCTCGTCTCCATaGAAACCGCGCGGGATAAGC +
Preference number: 4 (lower is better)
Translates to: QCMCNIDIQVRLSLCRAISGSSP*KPRGIS
Trigger: GCTTATCCCGCGCGGTTTCCATGGAGACGAGCCGGA...AATAGCTCTGCACAAAGACAGCCTGACTTGAATGTCTATATTACACATACACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp ATGTCATTTACATATGTGCAGTTTCACGTGAATATGCATAATCTTCCTGGTATGCCGCGGCCTCCGCCTTaGCCCGCTTGTCTTTCCTGT +
Preference number: 4 (lower is better)
Translates to: MSFTYVQFHVNMHNLPGMPRPPP*PACLSC
Trigger: ACAGGAAAGACAAGCGGGCCAAGGCGGAGGCCGCGG...CATACCAGGAAGATTATGCATATTCACGTGAAACTGCACATATGTAAATGACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp CAGTGTATGTGTAATATAGACATTCAAGTCAGGCTGTCTTTGTGCAGAGCTATTCCCTGCTCCTCGGTCTaGGAGAGCATGTCCCAGAAC +
Preference number: 4 (lower is better)
Translates to: QCMCNIDIQVRLSLCRAIPCSSV*ESMSQN
Trigger: GTTCTGGGACATGCTCTCCCAGACCGAGGAGCAGGG...AATAGCTCTGCACAAAGACAGCCTGACTTGAATGTCTATATTACACATACACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp CAGTGTATGTGTAATATAGACATTCAAGTCAGGCTGTCTTTGTGCAGAGCTATTCACACCTGGTGTCTTTaGGGGTCTCGGGCACCACCT +
Preference number: 4 (lower is better)
Translates to: QCMCNIDIQVRLSLCRAIHTWCL*GSRAPP
Trigger: AGGTGGTGCCCGAGACCCCCAAAGACACCAGGTGTG...AATAGCTCTGCACAAAGACAGCCTGACTTGAATGTCTATATTACACATACACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp CAGTGTATGTGTAATATAGACATTCAAGTCAGGCTGTCTTTGTGCAGAGCTATTCCGCTTCCACACACCTaGTGTCTTTGGGGGTCTCGG +
Preference number: 4 (lower is better)
Translates to: QCMCNIDIQVRLSLCRAIPLPHT*CLWGSR
Trigger: CCGAGACCCCCAAAGACACCAGGTGTGTGGAAGCGG...AATAGCTCTGCACAAAGACAGCCTGACTTGAATGTCTATATTACACATACACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp ATGTCATTTACATATGTGCAGTTTCACGTGAATATGCATAATCTTCCTGGTATGCCGAGGACGCGTCCTTaGCCGCTTCCACACACCTGG +
Preference number: 4 (lower is better)
Translates to: MSFTYVQFHVNMHNLPGMPRTRP*PLPHTW
Trigger: CCAGGTGTGTGGAAGCGGCCAAGGACGCGTCCTCGG...CATACCAGGAAGATTATGCATATTCACGTGAAACTGCACATATGTAAATGACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp TTTGACTTTTTCCTGTCTAATTTGGGCAGCCTTTCAACTAAAGGAAGTCAATCACGAGCTGTCTTCCTCTaGGCCTGGCGTGGTGGAGTC +
Preference number: 4 (lower is better)
Translates to: FDFFLSNLGSLSTKGSQSRAVFL*AWRGGV
Trigger: GACTCCACCACGCCAGGCCCAGAGGAAGACAGCTCG...TGATTGACTTCCTTTAGTTGAAAGGCTGCCCAAATTAGACAGGAAAAAGTCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp CAAACACAGATAACAAGTTGGCAAAGATGTGGAGAAATTGGAACCCTTGTGCACGACCTCACAACTTTTTaGCACTGTCGTGGCAGGCCG +
Preference number: 4 (lower is better)
Translates to: QTQITSWQRCGEIGTLVHDLTTF*HCRGRP
Trigger: CGGCCTGCCACGACAGTGCCAAAAAGTTGTGAGGTC...GTGCACAAGGGTTCCAATTTCTCCACATCTTTGCCAACTTGTTATCTGTGTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp TTAACAATGAAGGGGAGCAAAGCATACGTGAATGTACTGGAACAGGTCTCAGCATTTCCTTGCTCTGCCTaGAGGAGGGGAAAGGGAAAC +
Preference number: 4 (lower is better)
Translates to: LTMKGSKAYVNVLEQVSAFPCSA*RRGKGN
Trigger: GTTTCCCTTTCCCCTCCTCCAGGCAGAGCAAGGAAA...TGCTGAGACCTGTTCCAGTACATTCACGTATGCTTTGCTCCCCTTCATTGTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR TCA 90 bp TTCCCATTACAGTACATAACAGAACATCAATGGTTTGGGGACCATCATCATGTCCATGCTAGCGTCATGTaGAGTGTCCCGTCACTGCTG +
Preference number: 4 (lower is better)
Translates to: FPLQYITEHQWFGDHHHVHASVM*SVPSLL
Trigger: CAGCAGTGACGGGACACTTCACATGACGCTAGCATG...GACATGATGATGGTCCCCAAACCATTGATGTTCTGTTATGTACTGTAATGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR TCA 90 bp CAAACACAGATAACAAGTTGGCAAAGATGTGGAGAAATTGGAACCCTTGTGCACGGTGGGCAGATCATTTaGGGTCAGGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: QTQITSWQRCGEIGTLVHGGQII*GQEFET
Trigger: GGTCTCAAACTCCTGACCTCAAATGATCTGCCCACC...GTGCACAAGGGTTCCAATTTCTCCACATCTTTGCCAACTTGTTATCTGTGTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR GCA 90 bp CAGTGTATGTGTAATATAGACATTCAAGTCAGGCTGTCTTTGTGCAGAGCTATTTCAGCAGCCCAGCAATaGAAGCACAACAGCTCCCCG +
Preference number: 4 (lower is better)
Translates to: QCMCNIDIQVRLSLCRAISAAQQ*KHNSSP
Trigger: CGGGGAGCTGTTGTGCTTGCATTGCTGGGCTGCTGA...AATAGCTCTGCACAAAGACAGCCTGACTTGAATGTCTATATTACACATACACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR GCA 90 bp TTAACAATGAAGGGGAGCAAAGCATACGTGAATGTACTGGAACAGGTCTCAGCAGGCAGGAAGCATGTCTaGCTACATCCATGTCTTGTC +
Preference number: 4 (lower is better)
Translates to: LTMKGSKAYVNVLEQVSAGRKHV*LHPCLV
Trigger: GACAAGACATGGATGTAGGCAGACATGCTTCCTGCC...TGCTGAGACCTGTTCCAGTACATTCACGTATGCTTTGCTCCCCTTCATTGTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR GCA 90 bp CAGTGTATGTGTAATATAGACATTCAAGTCAGGCTGTCTTTGTGCAGAGCTATTGCGGCACAGTCACAATaGAAGTCCATGTCTGCCGCG +
Preference number: 4 (lower is better)
Translates to: QCMCNIDIQVRLSLCRAIAAQSQ*KSMSAA
Trigger: CGCGGCAGACATGGACTTGCATTGTGACTGTGCCGC...AATAGCTCTGCACAAAGACAGCCTGACTTGAATGTCTATATTACACATACACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR GCA 90 bp ATGTCATTTACATATGTGCAGTTTCACGTGAATATGCATAATCTTCCTGGTATGCCTGGCCCGGGGACATaGTTGTCACAGCTGGGACCT +
Preference number: 4 (lower is better)
Translates to: MSFTYVQFHVNMHNLPGMPGPGT*LSQLGP
Trigger: AGGTCCCAGCTGTGACAAGCATGTCCCCGGGCCAGG...CATACCAGGAAGATTATGCATATTCACGTGAAACTGCACATATGTAAATGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR GCA 90 bp ACATTCAAGTCAGGCTGTCTTTGTGCAGAGCTATTAAACCAACCGATAAATTTTTCACTCCTGGAGGGTTaGTGGTGCACCACGGGATGG +
Preference number: 4 (lower is better)
Translates to: TFKSGCLCAELLNQPINFSLLEG*WCTTGW
Trigger: CCATCCCGTGGTGCACCAGCAACCCTCCAGGAGTGA...AAAATTTATCGGTTGGTTTAATAGCTCTGCACAAAGACAGCCTGACTTGAATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR GCA 90 bp TTTAAAATGGGGAATGGCCTACTTTCTGCTACTGGCTCAATTTGCTTTCCTTTGGAAGTGTCCCGTCACTaGTGTCTGAGGGCACTTAGG +
Preference number: 4 (lower is better)
Translates to: FKMGNGLLSATGSICFPLEVSRH*CLRALR
Trigger: CCTAAGTGCCCTCAGACAGCAGTGACGGGACACTTC...CAAAGGAAAGCAAATTGAGCCAGTAGCAGAAAGTAGGCCATTCCCCATTTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp ACATTCAAGTCAGGCTGTCTTTGTGCAGAGCTATTAAACCAACCGATAAATTTTTCCGGCTCGTCTCCATaGAAACCGCGCGGGATAAGC +
Preference number: 4 (lower is better)
Translates to: TFKSGCLCAELLNQPINFSGSSP*KPRGIS
Trigger: GCTTATCCCGCGCGGTTTCCATGGAGACGAGCCGGA...AAAATTTATCGGTTGGTTTAATAGCTCTGCACAAAGACAGCCTGACTTGAATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp TGGCACAAGAAAGCAACTATGATCCCTTTTCTATGGTTGGAAAAAGTTGAGAATCCGCTTCCACACACCTaGTGTCTTTGGGGGTCTCGG +
Preference number: 4 (lower is better)
Translates to: WHKKATMIPFLWLEKVENPLPHT*CLWGSR
Trigger: CCGAGACCCCCAAAGACACCAGGTGTGTGGAAGCGG...ATTCTCAACTTTTTCCAACCATAGAAAAGGGATCATAGTTGCTTTCTTGTGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp TGGCACAAGAAAGCAACTATGATCCCTTTTCTATGGTTGGAAAAAGTTGAGAATGCCTGGTGTTCGCAGTaGACAGGTGATGGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: WHKKATMIPFLWLEKVENAWCSQ*TGDGAW
Trigger: CCAGGCACCATCACCTGTCCACTGCGAACACCAGGC...ATTCTCAACTTTTTCCAACCATAGAAAAGGGATCATAGTTGCTTTCTTGTGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp TTTAAAATGGGGAATGGCCTACTTTCTGCTACTGGCTCAATTTGCTTTCCTTTGCTTCAGCAAGCTGCCTaGTGTTCGCAGTGGACAGGT +
Preference number: 4 (lower is better)
Translates to: FKMGNGLLSATGSICFPLLQQAA*CSQWTG
Trigger: ACCTGTCCACTGCGAACACCAGGCAGCTTGCTGAAG...CAAAGGAAAGCAAATTGAGCCAGTAGCAGAAAGTAGGCCATTCCCCATTTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp CAAACACAGATAACAAGTTGGCAAAGATGTGGAGAAATTGGAACCCTTGTGCACCACGGGATGGCTAGATaGAAGGTTGGTCAGGTGCTT +
Preference number: 4 (lower is better)
Translates to: QTQITSWQRCGEIGTLVHHGMAR*KVGQVL
Trigger: AAGCACCTGACCAACCTTCCATCTAGCCATCCCGTG...GTGCACAAGGGTTCCAATTTCTCCACATCTTTGCCAACTTGTTATCTGTGTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp CAAACACAGATAACAAGTTGGCAAAGATGTGGAGAAATTGGAACCCTTGTGCACCCGGGATTTTTGTTCTaGGCATCTCACTCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: QTQITSWQRCGEIGTLVHPGFLF*ASHSWR
Trigger: CCTCCAGGAGTGAGATGCCCAGAACAAAAATCCCGG...GTGCACAAGGGTTCCAATTTCTCCACATCTTTGCCAACTTGTTATCTGTGTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp TTCCCATTACAGTACATAACAGAACATCAATGGTTTGGGGACCATCATCATGTCGACCTCACAACTTTTTaGCACTGTCGTGGCAGGCCG +
Preference number: 4 (lower is better)
Translates to: FPLQYITEHQWFGDHHHVDLTTF*HCRGRP
Trigger: CGGCCTGCCACGACAGTGCCAAAAAGTTGTGAGGTC...GACATGATGATGGTCCCCAAACCATTGATGTTCTGTTATGTACTGTAATGGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp TTAACAATGAAGGGGAGCAAAGCATACGTGAATGTACTGGAACAGGTCTCAGCACAGGCCTCTAGACACTaGCTTATCCCAATATCCAGG +
Preference number: 4 (lower is better)
Translates to: LTMKGSKAYVNVLEQVSAQASRH*LIPISR
Trigger: CCTGGATATTGGGATAAGCCAGTGTCTAGAGGCCTG...TGCTGAGACCTGTTCCAGTACATTCACGTATGCTTTGCTCCCCTTCATTGTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp GACTCTTACCCAAAACAAGGCAGAGCCATTCCTCTGGGACACCAGCACAATAGAAGAGAAAGTAGCCCTTaGCACAAGAAAGCAACTATG +
Preference number: 4 (lower is better)
Translates to: DSYPKQGRAIPLGHQHNRRESSP*HKKATM
Trigger: CATAGTTGCTTTCTTGTGCCAAGGGCTACTTTCTCT...TCTATTGTGCTGGTGTCCCAGAGGAATGGCTCTGCCTTGTTTTGGGTAAGAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp TTAACAATGAAGGGGAGCAAAGCATACGTGAATGTACTGGAACAGGTCTCAGCACATGAGCTGCCTGAGTaGATCTCTTCACACCAAGCT +
Preference number: 4 (lower is better)
Translates to: LTMKGSKAYVNVLEQVSAHELPE*ISSHQA
Trigger: AGCTTGGTGTGAAGAGATCCACTCAGGCAGCTCATG...TGCTGAGACCTGTTCCAGTACATTCACGTATGCTTTGCTCCCCTTCATTGTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp CAAACACAGATAACAAGTTGGCAAAGATGTGGAGAAATTGGAACCCTTGTGCACAAGGTAACCCGGGCGTaGTGGCTCATTGCCTGTAAT +
Preference number: 4 (lower is better)
Translates to: QTQITSWQRCGEIGTLVHKVTRA*WLIACN
Trigger: ATTACAGGCAATGAGCCACCACGCCCGGGTTACCTT...GTGCACAAGGGTTCCAATTTCTCCACATCTTTGCCAACTTGTTATCTGTGTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR TCA 90 bp ATGTCATTTACATATGTGCAGTTTCACGTGAATATGCATAATCTTCCTGGTATGTATTCTAAATCAACCTaGGCCGCGCTCGCCGCCGCC +
Preference number: 4 (lower is better)
Translates to: MSFTYVQFHVNMHNLPGMYSKST*AALAAA
Trigger: GGCGGCGGCGAGCGCGGCTCAGGTTGATTTAGAATA...CATACCAGGAAGATTATGCATATTCACGTGAAACTGCACATATGTAAATGACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR TCA 90 bp GACTCTTACCCAAAACAAGGCAGAGCCATTCCTCTGGGACACCAGCACAATAGATTCCCATCAAGTGATTaGGGCTGTTTAATTCATTGC +
Preference number: 4 (lower is better)
Translates to: DSYPKQGRAIPLGHQHNRFPSSD*GCLIHC
Trigger: GCAATGAATTAAACAGCCTCAATCACTTGATGGGAA...TCTATTGTGCTGGTGTCCCAGAGGAATGGCTCTGCCTTGTTTTGGGTAAGAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR TCA 90 bp GACTCTTACCCAAAACAAGGCAGAGCCATTCCTCTGGGACACCAGCACAATAGAGGATTTCCCATCAAGTaGTTGAGGCTGTTTAATTCA +
Preference number: 4 (lower is better)
Translates to: DSYPKQGRAIPLGHQHNRGFPIK*LRLFNS
Trigger: TGAATTAAACAGCCTCAATCACTTGATGGGAAATCC...TCTATTGTGCTGGTGTCCCAGAGGAATGGCTCTGCCTTGTTTTGGGTAAGAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR TCA 90 bp GACTCTTACCCAAAACAAGGCAGAGCCATTCCTCTGGGACACCAGCACAATAGAAGAAATCTCAACACCTaGCATAGTCTTTTTACCTGG +
Preference number: 4 (lower is better)
Translates to: DSYPKQGRAIPLGHQHNRRNLNT*HSLFTW
Trigger: CCAGGTAAAAAGACTATGTCAGGTGTTGAGATTTCT...TCTATTGTGCTGGTGTCCCAGAGGAATGGCTCTGCCTTGTTTTGGGTAAGAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR TCA 90 bp GCTAATGGCAGGATAAACGCATCAACCACCATCTGTACTAAAGCAGAGTGTTTCGGAGCAAAGCATACGTaGATGTACTGGAACAGGTCT +
Preference number: 4 (lower is better)
Translates to: ANGRINASTTICTKAECFGAKHT*MYWNRS
Trigger: AGACCTGTTCCAGTACATTCACGTATGCTTTGCTCC...GAAACACTCTGCTTTAGTACAGATGGTGGTTGATGCGTTTATCCTGCCATTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR GCA 90 bp ACATTCAAGTCAGGCTGTCTTTGTGCAGAGCTATTAAACCAACCGATAAATTTTTCAGCAGCCCAGCAATaGAAGCACAACAGCTCCCCG +
Preference number: 4 (lower is better)
Translates to: TFKSGCLCAELLNQPINFSAAQQ*KHNSSP
Trigger: CGGGGAGCTGTTGTGCTTGCATTGCTGGGCTGCTGA...AAAATTTATCGGTTGGTTTAATAGCTCTGCACAAAGACAGCCTGACTTGAATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR GCA 90 bp TGGCACAAGAAAGCAACTATGATCCCTTTTCTATGGTTGGAAAAAGTTGAGAATCGCTTGTCTTTCCTGTaGCAGCGCATGCCGCTGAAC +
Preference number: 4 (lower is better)
Translates to: WHKKATMIPFLWLEKVENRLSFL*QRMPLN
Trigger: GTTCAGCGGCATGCGCTGGCACAGGAAAGACAAGCG...ATTCTCAACTTTTTCCAACCATAGAAAAGGGATCATAGTTGCTTTCTTGTGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR GCA 90 bp CAGTGTATGTGTAATATAGACATTCAAGTCAGGCTGTCTTTGTGCAGAGCTATTAGTCCTTCAGCAAGCTaGCTGGTGTTCGCAGTGGAC +
Preference number: 4 (lower is better)
Translates to: QCMCNIDIQVRLSLCRAISPSAS*LVFAVD
Trigger: GTCCACTGCGAACACCAGGCAGCTTGCTGAAGGACT...AATAGCTCTGCACAAAGACAGCCTGACTTGAATGTCTATATTACACATACACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR GCA 90 bp TTAACAATGAAGGGGAGCAAAGCATACGTGAATGTACTGGAACAGGTCTCAGCAGGAAGGTTGGTCAGGTaGTTGATGCTAATAGGGATC +
Preference number: 4 (lower is better)
Translates to: LTMKGSKAYVNVLEQVSAGRLVR*LMLIGI
Trigger: GATCCCTATTAGCATCAAGCACCTGACCAACCTTCC...TGCTGAGACCTGTTCCAGTACATTCACGTATGCTTTGCTCCCCTTCATTGTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR GCA 90 bp TTAACAATGAAGGGGAGCAAAGCATACGTGAATGTACTGGAACAGGTCTCAGCAAGAATCTACTCTTCCTaGCACTCCAGGGATTTCCCA +
Preference number: 4 (lower is better)
Translates to: LTMKGSKAYVNVLEQVSARIYSS*HSRDFP
Trigger: TGGGAAATCCCTGGAGTGGCAGGAAGAGTAGATTCT...TGCTGAGACCTGTTCCAGTACATTCACGTATGCTTTGCTCCCCTTCATTGTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR GCA 90 bp TTTAAAATGGGGAATGGCCTACTTTCTGCTACTGGCTCAATTTGCTTTCCTTTGGAATGCATTCCGCCATaGGGACAGAGCCAACATGCT +
Preference number: 4 (lower is better)
Translates to: FKMGNGLLSATGSICFPLECIPP*GQSQHA
Trigger: AGCATGTTGGCTCTGTCCGCATGGCGGAATGCATTC...CAAAGGAAAGCAAATTGAGCCAGTAGCAGAAAGTAGGCCATTCCCCATTTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp ATGTCATTTACATATGTGCAGTTTCACGTGAATATGCATAATCTTCCTGGTATGAGAAGCTGTGCGACTTaGCCACCGAGCTGCTGGCGA +
Preference number: 4 (lower is better)
Translates to: MSFTYVQFHVNMHNLPGMRSCAT*PPSCWR
Trigger: TCGCCAGCAGCTCGGTGGCCAAGTCGCACAGCTTCT...CATACCAGGAAGATTATGCATATTCACGTGAAACTGCACATATGTAAATGACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp ATGTCATTTACATATGTGCAGTTTCACGTGAATATGCATAATCTTCCTGGTATGCCCTGCTCCTCGGTCTaGGAGAGCATGTCCCAGAAC +
Preference number: 4 (lower is better)
Translates to: MSFTYVQFHVNMHNLPGMPCSSV*ESMSQN
Trigger: GTTCTGGGACATGCTCTCCCAGACCGAGGAGCAGGG...CATACCAGGAAGATTATGCATATTCACGTGAAACTGCACATATGTAAATGACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp ATGTCATTTACATATGTGCAGTTTCACGTGAATATGCATAATCTTCCTGGTATGTCCAGGAAGGGTTGCTaGACTTCCGTCCGGGTCAGC +
Preference number: 4 (lower is better)
Translates to: MSFTYVQFHVNMHNLPGMSRKGC*TSVRVS
Trigger: GCTGACCCGGACGGAAGTCCAGCAACCCTTCCTGGA...CATACCAGGAAGATTATGCATATTCACGTGAAACTGCACATATGTAAATGACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp TTTGACTTTTTCCTGTCTAATTTGGGCAGCCTTTCAACTAAAGGAAGTCAATCATGGGCATCTCACTCCTaGAGGGTTGCTGGTGCACCA +
Preference number: 4 (lower is better)
Translates to: FDFFLSNLGSLSTKGSQSWASHS*RVAGAP
Trigger: TGGTGCACCAGCAACCCTCCAGGAGTGAGATGCCCA...TGATTGACTTCCTTTAGTTGAAAGGCTGCCCAAATTAGACAGGAAAAAGTCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp TTCCCATTACAGTACATAACAGAACATCAATGGTTTGGGGACCATCATCATGTCTTTTTGGCACTGTCGTaGCAGGCCGTTGCTCTGATG +
Preference number: 4 (lower is better)
Translates to: FPLQYITEHQWFGDHHHVFLALS*QAVALM
Trigger: CATCAGAGCAACGGCCTGCCACGACAGTGCCAAAAA...GACATGATGATGGTCCCCAAACCATTGATGTTCTGTTATGTACTGTAATGGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp ATGTCATTTACATATGTGCAGTTTCACGTGAATATGCATAATCTTCCTGGTATGGGGGCCCATCCACCTTaGCCTGGAAGACCTCACAAC +
Preference number: 4 (lower is better)
Translates to: MSFTYVQFHVNMHNLPGMGAHPP*PGRPHN
Trigger: GTTGTGAGGTCTTCCAGGCCAAGGTGGATGGGCCCC...CATACCAGGAAGATTATGCATATTCACGTGAAACTGCACATATGTAAATGACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp TTCCCATTACAGTACATAACAGAACATCAATGGTTTGGGGACCATCATCATGTCAAGGTAACCCGGGCGTaGTGGCTCATTGCCTGTAAT +
Preference number: 4 (lower is better)
Translates to: FPLQYITEHQWFGDHHHVKVTRA*WLIACN
Trigger: ATTACAGGCAATGAGCCACCACGCCCGGGTTACCTT...GACATGATGATGGTCCCCAAACCATTGATGTTCTGTTATGTACTGTAATGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR TCA 90 bp ACATTCAAGTCAGGCTGTCTTTGTGCAGAGCTATTAAACCAACCGATAAATTTTTGTCTTGTCCAGAGCTaGGCACACGCTAGGTCCATG +
Preference number: 4 (lower is better)
Translates to: TFKSGCLCAELLNQPINFCLVQS*AHARSM
Trigger: CATGGACCTAGCGTGTGCTCAGCTCTGGACAAGACA...AAAATTTATCGGTTGGTTTAATAGCTCTGCACAAAGACAGCCTGACTTGAATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR TCA 90 bp ATGTCATTTACATATGTGCAGTTTCACGTGAATATGCATAATCTTCCTGGTATGTTCGCAGTGGACAGGTaGTGGTGCCTGGAGATACGG +
Preference number: 4 (lower is better)
Translates to: MSFTYVQFHVNMHNLPGMFAVDR*WCLEIR
Trigger: CCGTATCTCCAGGCACCATCACCTGTCCACTGCGAA...CATACCAGGAAGATTATGCATATTCACGTGAAACTGCACATATGTAAATGACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR TCA 90 bp GACTCTTACCCAAAACAAGGCAGAGCCATTCCTCTGGGACACCAGCACAATAGATTGCACTCATTATATTaGGGAATGGTTGGATCTGAA +
Preference number: 4 (lower is better)
Translates to: DSYPKQGRAIPLGHQHNRLHSLY*GMVGSE
Trigger: TTCAGATCCAACCATTCCTCAATATAATGAGTGCAA...TCTATTGTGCTGGTGTCCCAGAGGAATGGCTCTGCCTTGTTTTGGGTAAGAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR TCA 90 bp TTCCCATTACAGTACATAACAGAACATCAATGGTTTGGGGACCATCATCATGTCACACAGTTGAGTGCATaGGCACGTGAGTGTGAGATG +
Preference number: 4 (lower is better)
Translates to: FPLQYITEHQWFGDHHHVTQLSA*ARECEM
Trigger: CATCTCACACTCACGTGCTCATGCACTCAACTGTGT...GACATGATGATGGTCCCCAAACCATTGATGTTCTGTTATGTACTGTAATGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR TCA 90 bp CAGTGTATGTGTAATATAGACATTCAAGTCAGGCTGTCTTTGTGCAGAGCTATTAACACAGCCGCGAGCTaGTTGCAGAAATTCGAGTCG +
Preference number: 4 (lower is better)
Translates to: QCMCNIDIQVRLSLCRAINTAAS*LQKFES
Trigger: CGACTCGAATTTCTGCAATCAGCTCGCGGCTGTGTT...AATAGCTCTGCACAAAGACAGCCTGACTTGAATGTCTATATTACACATACACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515384.2
CDS-3UTR GCA 90 bp CAGTGTATGTGTAATATAGACATTCAAGTCAGGCTGTCTTTGTGCAGAGCTATTCACACGCTAGGTCCATaGTGTGTGGCTGTCATTGTG +
Preference number: 4 (lower is better)
Translates to: QCMCNIDIQVRLSLCRAIHTLGP*CVAVIV
Trigger: CACAATGACAGCCACACAGCATGGACCTAGCGTGTG...AATAGCTCTGCACAAAGACAGCCTGACTTGAATGTCTATATTACACATACACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR GCA 90 bp GCTAATGGCAGGATAAACGCATCAACCACCATCTGTACTAAAGCAGAGTGTTTCCTCTTCCTCTTGGTCTaGAATAATATCTCCACAGCC +
Preference number: 4 (lower is better)
Translates to: ANGRINASTTICTKAECFLFLLV*NNISTA
Trigger: GGCTGTGGAGATATTATTGCAGACCAAGAGGAAGAG...GAAACACTCTGCTTTAGTACAGATGGTGGTTGATGCGTTTATCCTGCCATTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR GCA 90 bp TTTGACTTTTTCCTGTCTAATTTGGGCAGCCTTTCAACTAAAGGAAGTCAATCAGTGTTATCCGGTCCCTaGTCAGGGCACAAAGACCTC +
Preference number: 4 (lower is better)
Translates to: FDFFLSNLGSLSTKGSQSVLSGP*SGHKDL
Trigger: GAGGTCTTTGTGCCCTGAGCAGGGACCGGATAACAC...TGATTGACTTCCTTTAGTTGAAAGGCTGCCCAAATTAGACAGGAAAAAGTCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR GCA 90 bp TTTGACTTTTTCCTGTCTAATTTGGGCAGCCTTTCAACTAAAGGAAGTCAATCAGAAGTGTCCCGTCACTaGTGTCTGAGGGCACTTAGG +
Preference number: 4 (lower is better)
Translates to: FDFFLSNLGSLSTKGSQSEVSRH*CLRALR
Trigger: CCTAAGTGCCCTCAGACAGCAGTGACGGGACACTTC...TGATTGACTTCCTTTAGTTGAAAGGCTGCCCAAATTAGACAGGAAAAAGTCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR GCA 90 bp TTTAAAATGGGGAATGGCCTACTTTCTGCTACTGGCTCAATTTGCTTTCCTTTGGAGGAAATGAGGAGCTaGTGTTCAATGGGCACAGAG +
Preference number: 4 (lower is better)
Translates to: FKMGNGLLSATGSICFPLEEMRS*CSMGTE
Trigger: CTCTGTGCCCATTGAACAGCAGCTCCTCATTTCCTC...CAAAGGAAAGCAAATTGAGCCAGTAGCAGAAAGTAGGCCATTCCCCATTTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp TTTGACTTTTTCCTGTCTAATTTGGGCAGCCTTTCAACTAAAGGAAGTCAATCACTTCAGCAAGCTGCCTaGTGTTCGCAGTGGACAGGT +
Preference number: 4 (lower is better)
Translates to: FDFFLSNLGSLSTKGSQSLQQAA*CSQWTG
Trigger: ACCTGTCCACTGCGAACACCAGGCAGCTTGCTGAAG...TGATTGACTTCCTTTAGTTGAAAGGCTGCCCAAATTAGACAGGAAAAAGTCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp CAAACACAGATAACAAGTTGGCAAAGATGTGGAGAAATTGGAACCCTTGTGCACAAAAGTTGTATTCCTTaGCATGGGGCCCATCCACCT +
Preference number: 4 (lower is better)
Translates to: QTQITSWQRCGEIGTLVHKSCIP*HGAHPP
Trigger: AGGTGGATGGGCCCCATGCCAAGGAATACAACTTTT...GTGCACAAGGGTTCCAATTTCTCCACATCTTTGCCAACTTGTTATCTGTGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp TTTGACTTTTTCCTGTCTAATTTGGGCAGCCTTTCAACTAAAGGAAGTCAATCAAGGGCGGGGGACGGGTaGTGTCCTAAAAGACTTTCT +
Preference number: 4 (lower is better)
Translates to: FDFFLSNLGSLSTKGSQSRAGDG*CPKRLS
Trigger: AGAAAGTCTTTTAGGACACCACCCGTCCCCCGCCCT...TGATTGACTTCCTTTAGTTGAAAGGCTGCCCAAATTAGACAGGAAAAAGTCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp TGGCACAAGAAAGCAACTATGATCCCTTTTCTATGGTTGGAAAAAGTTGAGAATAGGGCGGGGGACGGGTaGTGTCCTAAAAGACTTTCT +
Preference number: 4 (lower is better)
Translates to: WHKKATMIPFLWLEKVENRAGDG*CPKRLS
Trigger: AGAAAGTCTTTTAGGACACCACCCGTCCCCCGCCCT...ATTCTCAACTTTTTCCAACCATAGAAAAGGGATCATAGTTGCTTTCTTGTGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp TTTAAAATGGGGAATGGCCTACTTTCTGCTACTGGCTCAATTTGCTTTCCTTTGTTTTCTGCCAATCAGTaGTCCCCTCTGCTCATCAGG +
Preference number: 4 (lower is better)
Translates to: FKMGNGLLSATGSICFPLFSANQ*SPLLIR
Trigger: CCTGATGAGCAGAGGGGACCACTGATTGGCAGAAAA...CAAAGGAAAGCAAATTGAGCCAGTAGCAGAAAGTAGGCCATTCCCCATTTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp TTTAAAATGGGGAATGGCCTACTTTCTGCTACTGGCTCAATTTGCTTTCCTTTGCATGAGCTGCCTGAGTaGATCTCTTCACACCAAGCT +
Preference number: 4 (lower is better)
Translates to: FKMGNGLLSATGSICFPLHELPE*ISSHQA
Trigger: AGCTTGGTGTGAAGAGATCCACTCAGGCAGCTCATG...CAAAGGAAAGCAAATTGAGCCAGTAGCAGAAAGTAGGCCATTCCCCATTTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp CAGTGTATGTGTAATATAGACATTCAAGTCAGGCTGTCTTTGTGCAGAGCTATTTTTCCTTGCTCTGCCTaGAGGAGGGGAAAGGGAAAC +
Preference number: 4 (lower is better)
Translates to: QCMCNIDIQVRLSLCRAIFPCSA*RRGKGN
Trigger: GTTTCCCTTTCCCCTCCTCCAGGCAGAGCAAGGAAA...AATAGCTCTGCACAAAGACAGCCTGACTTGAATGTCTATATTACACATACACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR TCA 90 bp GCTAATGGCAGGATAAACGCATCAACCACCATCTGTACTAAAGCAGAGTGTTTCATCTCCCCAAACAAATaGCTGAAACCAACCAAACCA +
Preference number: 4 (lower is better)
Translates to: ANGRINASTTICTKAECFISPNK*LKPTKP
Trigger: TGGTTTGGTTGGTTTCAGTCATTTGTTTGGGGAGAT...GAAACACTCTGCTTTAGTACAGATGGTGGTTGATGCGTTTATCCTGCCATTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR TCA 90 bp TTAACAATGAAGGGGAGCAAAGCATACGTGAATGTACTGGAACAGGTCTCAGCAGCCAGTGTCATATTCTaGACACACTTGTCTTTGTCA +
Preference number: 4 (lower is better)
Translates to: LTMKGSKAYVNVLEQVSAASVIF*THLSLS
Trigger: TGACAAAGACAAGTGTGTTCAGAATATGACACTGGC...TGCTGAGACCTGTTCCAGTACATTCACGTATGCTTTGCTCCCCTTCATTGTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR TCA 90 bp CAAACACAGATAACAAGTTGGCAAAGATGTGGAGAAATTGGAACCCTTGTGCACGAATGCTTAAGGCTATaGCTGCATATAGGGCCTCAT +
Preference number: 4 (lower is better)
Translates to: QTQITSWQRCGEIGTLVHECLRL*LHIGPH
Trigger: ATGAGGCCCTATATGCAGTCATAGCCTTAAGCATTC...GTGCACAAGGGTTCCAATTTCTCCACATCTTTGCCAACTTGTTATCTGTGTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR TCA 90 bp GCTAATGGCAGGATAAACGCATCAACCACCATCTGTACTAAAGCAGAGTGTTTCATGGTTGGAAAAAGTTaGGAATCTACTCTTCCTGCC +
Preference number: 4 (lower is better)
Translates to: ANGRINASTTICTKAECFMVGKS*ESTLPA
Trigger: GGCAGGAAGAGTAGATTCTCAACTTTTTCCAACCAT...GAAACACTCTGCTTTAGTACAGATGGTGGTTGATGCGTTTATCCTGCCATTAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR TCA 90 bp GCTAATGGCAGGATAAACGCATCAACCACCATCTGTACTAAAGCAGAGTGTTTCCAGCAAATATGGGCCTaGATAATCTTCACAAGGTCA +
Preference number: 4 (lower is better)
Translates to: ANGRINASTTICTKAECFQQIWA*IIFTRS
Trigger: TGACCTTGTGAAGATTATTCAGGCCCATATTTGCTG...GAAACACTCTGCTTTAGTACAGATGGTGGTTGATGCGTTTATCCTGCCATTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR TCA 90 bp GCTAATGGCAGGATAAACGCATCAACCACCATCTGTACTAAAGCAGAGTGTTTCTCCTCAGTGATGAGATaGGGCAATTGTGATGCTTAT +
Preference number: 4 (lower is better)
Translates to: ANGRINASTTICTKAECFSSVMR*GNCDAY
Trigger: ATAAGCATCACAATTGCCTCATCTCATCACTGAGGA...GAAACACTCTGCTTTAGTACAGATGGTGGTTGATGCGTTTATCCTGCCATTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR TCA 90 bp TTAACAATGAAGGGGAGCAAAGCATACGTGAATGTACTGGAACAGGTCTCAGCAAGGTCTGAGAGTATCTaGGAAGGTATAGTATGTCTC +
Preference number: 4 (lower is better)
Translates to: LTMKGSKAYVNVLEQVSARSESI*EGIVCL
Trigger: GAGACATACTATACCTTCTCAGATACTCTCAGACCT...TGCTGAGACCTGTTCCAGTACATTCACGTATGCTTTGCTCCCCTTCATTGTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR GCA 90 bp ACATTCAAGTCAGGCTGTCTTTGTGCAGAGCTATTAAACCAACCGATAAATTTTACTAACAGCAGGGAATaGATTCCGCCATGCGGACAG +
Preference number: 4 (lower is better)
Translates to: TFKSGCLCAELLNQPINFTNSRE*IPPCGQ
Trigger: CTGTCCGCATGGCGGAATGCATTCCCTGCTGTTAGT...AAAATTTATCGGTTGGTTTAATAGCTCTGCACAAAGACAGCCTGACTTGAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp ACATTCAAGTCAGGCTGTCTTTGTGCAGAGCTATTAAACCAACCGATAAATTTTCATGCTTGTCACAGCTaGGACCTGCCTCTTCCTCTT +
Preference number: 4 (lower is better)
Translates to: TFKSGCLCAELLNQPINFHACHS*DLPLPL
Trigger: AAGAGGAAGAGGCAGGTCCCAGCTGTGACAAGCATG...AAAATTTATCGGTTGGTTTAATAGCTCTGCACAAAGACAGCCTGACTTGAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp TTCCCATTACAGTACATAACAGAACATCAATGGTTTGGGGACCATCATCATGTCTGCGGACCAGCACTTTaGAAACCGGGATTTTTGTTC +
Preference number: 4 (lower is better)
Translates to: FPLQYITEHQWFGDHHHVCGPAL*KPGFLF
Trigger: GAACAAAAATCCCGGTTTCCAAAGTGCTGGTCCGCA...GACATGATGATGGTCCCCAAACCATTGATGTTCTGTTATGTACTGTAATGGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp ATGTCATTTACATATGTGCAGTTTCACGTGAATATGCATAATCTTCCTGGTATGTTGTATTCCTTGGCATaGGGCCCATCCACCTTGGCC +
Preference number: 4 (lower is better)
Translates to: MSFTYVQFHVNMHNLPGMLYSLA*GPSTLA
Trigger: GGCCAAGGTGGATGGGCCCCATGCCAAGGAATACAA...CATACCAGGAAGATTATGCATATTCACGTGAAACTGCACATATGTAAATGACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp ACATTCAAGTCAGGCTGTCTTTGTGCAGAGCTATTAAACCAACCGATAAATTTTTGCATGGCGTTTTTGTaGCAGGAGCAGGCAACACAG +
Preference number: 4 (lower is better)
Translates to: TFKSGCLCAELLNQPINFCMAFL*QEQATQ
Trigger: CTGTGTTGCCTGCTCCTGCCACAAAAACGCCATGCA...AAAATTTATCGGTTGGTTTAATAGCTCTGCACAAAGACAGCCTGACTTGAATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000515384.2
CDS-3UTR TCA 90 bp CAAACACAGATAACAAGTTGGCAAAGATGTGGAGAAATTGGAACCCTTGTGCACCCCAAATCCTTTATTTaGTTGGTGTGGGTGCAATTC +
Preference number: 4 (lower is better)
Translates to: QTQITSWQRCGEIGTLVHPKSFI*LVWVQF
Trigger: GAATTGCACCCACACCAATCAAATAAAGGATTTGGG...GTGCACAAGGGTTCCAATTTCTCCACATCTTTGCCAACTTGTTATCTGTGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR TCA 90 bp CAAACACAGATAACAAGTTGGCAAAGATGTGGAGAAATTGGAACCCTTGTGCACCAGCAAATATGGGCCTaGATAATCTTCACAAGGTCA +
Preference number: 4 (lower is better)
Translates to: QTQITSWQRCGEIGTLVHQQIWA*IIFTRS
Trigger: TGACCTTGTGAAGATTATTCAGGCCCATATTTGCTG...GTGCACAAGGGTTCCAATTTCTCCACATCTTTGCCAACTTGTTATCTGTGTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR TCA 90 bp GCTAATGGCAGGATAAACGCATCAACCACCATCTGTACTAAAGCAGAGTGTTTCAGAAATCTCAACACCTaGCATAGTCTTTTTACCTGG +
Preference number: 4 (lower is better)
Translates to: ANGRINASTTICTKAECFRNLNT*HSLFTW
Trigger: CCAGGTAAAAAGACTATGTCAGGTGTTGAGATTTCT...GAAACACTCTGCTTTAGTACAGATGGTGGTTGATGCGTTTATCCTGCCATTAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR GCA 90 bp TTTGACTTTTTCCTGTCTAATTTGGGCAGCCTTTCAACTAAAGGAAGTCAATCAAAATGCTGGGCATGGTaGCACCCGATTTCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: FDFFLSNLGSLSTKGSQSKCWAW*HPISSS
Trigger: AGAAGAGGAAATCGGGTGGCACCATGCCCAGCATTT...TGATTGACTTCCTTTAGTTGAAAGGCTGCCCAAATTAGACAGGAAAAAGTCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR GCA 90 bp TGGCACAAGAAAGCAACTATGATCCCTTTTCTATGGTTGGAAAAAGTTGAGAATCGTAGGGAAGTTTTCTaGCAATCAGTGGTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: WHKKATMIPFLWLEKVENRREVF*QSVVPS
Trigger: AGAGGGGACCACTGATTGGCAGAAAACTTCCCTACG...ATTCTCAACTTTTTCCAACCATAGAAAAGGGATCATAGTTGCTTTCTTGTGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR GCA 90 bp TTTGACTTTTTCCTGTCTAATTTGGGCAGCCTTTCAACTAAAGGAAGTCAATCACCTGATCCTGATTTCTaGACTGGGTGGGGGAAGAAA +
Preference number: 4 (lower is better)
Translates to: FDFFLSNLGSLSTKGSQSPDPDF*TGWGKK
Trigger: TTTCTTCCCCCACCCAGTGCAGAAATCAGGATCAGG...TGATTGACTTCCTTTAGTTGAAAGGCTGCCCAAATTAGACAGGAAAAAGTCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR GCA 90 bp TTAACAATGAAGGGGAGCAAAGCATACGTGAATGTACTGGAACAGGTCTCAGCAGCTACTGGCTCAATTTaGTTTCCTTTGATGTCCATT +
Preference number: 4 (lower is better)
Translates to: LTMKGSKAYVNVLEQVSAATGSI*FPLMSI
Trigger: AATGGACATCAAAGGAAAGCAAATTGAGCCAGTAGC...TGCTGAGACCTGTTCCAGTACATTCACGTATGCTTTGCTCCCCTTCATTGTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR GCA 90 bp TTCCCATTACAGTACATAACAGAACATCAATGGTTTGGGGACCATCATCATGTCGTCAGGCTGTCTTTGTaGAGAGCTATTAAACCAACC +
Preference number: 4 (lower is better)
Translates to: FPLQYITEHQWFGDHHHVVRLSL*RAIKPT
Trigger: GGTTGGTTTAATAGCTCTGCACAAAGACAGCCTGAC...GACATGATGATGGTCCCCAAACCATTGATGTTCTGTTATGTACTGTAATGGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR GCA 90 bp CAGTGTATGTGTAATATAGACATTCAAGTCAGGCTGTCTTTGTGCAGAGCTATTTTAGGAGACATGAGCTaGCTGAGTGGATCTCTTCAC +
Preference number: 4 (lower is better)
Translates to: QCMCNIDIQVRLSLCRAILGDMS*LSGSLH
Trigger: GTGAAGAGATCCACTCAGGCAGCTCATGTCTCCTAA...AATAGCTCTGCACAAAGACAGCCTGACTTGAATGTCTATATTACACATACACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR GCA 90 bp TGGCACAAGAAAGCAACTATGATCCCTTTTCTATGGTTGGAAAAAGTTGAGAATGAGGAAATGAGGAGCTaGTGTTCAATGGGCACAGAG +
Preference number: 4 (lower is better)
Translates to: WHKKATMIPFLWLEKVENEEMRS*CSMGTE
Trigger: CTCTGTGCCCATTGAACAGCAGCTCCTCATTTCCTC...ATTCTCAACTTTTTCCAACCATAGAAAAGGGATCATAGTTGCTTTCTTGTGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR GCA 90 bp ATGTCATTTACATATGTGCAGTTTCACGTGAATATGCATAATCTTCCTGGTATGGCTCGCCGCCGCCGCTaGAAAAGAAACACACATAAA +
Preference number: 4 (lower is better)
Translates to: MSFTYVQFHVNMHNLPGMARRRR*KRNTHK
Trigger: TTTATGTGTGTTTCTTTTGCAGCGGCGGCGGCGAGC...CATACCAGGAAGATTATGCATATTCACGTGAAACTGCACATATGTAAATGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515384.2
CDS-3UTR CCA 90 bp TTTGACTTTTTCCTGTCTAATTTGGGCAGCCTTTCAACTAAAGGAAGTCAATCACAAAAATGCTGGGCATaGTGCCACCCGATTTCCTCT +
Preference number: 4 (lower is better)
Translates to: FDFFLSNLGSLSTKGSQSQKCWA*CHPISS
Trigger: AGAGGAAATCGGGTGGCACCATGCCCAGCATTTTTG...TGATTGACTTCCTTTAGTTGAAAGGCTGCCCAAATTAGACAGGAAAAAGTCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp TTTAAAATGGGGAATGGCCTACTTTCTGCTACTGGCTCAATTTGCTTTCCTTTGCCTGCCTCTTCCTCTTaGTCTGCAATAATATCTCCA +
Preference number: 4 (lower is better)
Translates to: FKMGNGLLSATGSICFPLPASSS*SAIISP
Trigger: TGGAGATATTATTGCAGACCAAGAGGAAGAGGCAGG...CAAAGGAAAGCAAATTGAGCCAGTAGCAGAAAGTAGGCCATTCCCCATTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp CAGTGTATGTGTAATATAGACATTCAAGTCAGGCTGTCTTTGTGCAGAGCTATTCCATCCACCTTGGCCTaGAAGACCTCACAACTTTTT +
Preference number: 4 (lower is better)
Translates to: QCMCNIDIQVRLSLCRAIPSTLA*KTSQLF
Trigger: AAAAAGTTGTGAGGTCTTCCAGGCCAAGGTGGATGG...AATAGCTCTGCACAAAGACAGCCTGACTTGAATGTCTATATTACACATACACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp TTCCCATTACAGTACATAACAGAACATCAATGGTTTGGGGACCATCATCATGTCCATCAGGTAAATACCTaGCTCTTTCAGCTTTGGAGG +
Preference number: 4 (lower is better)
Translates to: FPLQYITEHQWFGDHHHVHQVNT*LFQLWR
Trigger: CCTCCAAAGCTGAAAGAGCCAGGTATTTACCTGATG...GACATGATGATGGTCCCCAAACCATTGATGTTCTGTTATGTACTGTAATGGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp GCTAATGGCAGGATAAACGCATCAACCACCATCTGTACTAAAGCAGAGTGTTTCAGAACATCAATGGTTTaGGGACCATCATCATGTCTA +
Preference number: 4 (lower is better)
Translates to: ANGRINASTTICTKAECFRTSMV*GPSSCL
Trigger: TAGACATGATGATGGTCCCCAAACCATTGATGTTCT...GAAACACTCTGCTTTAGTACAGATGGTGGTTGATGCGTTTATCCTGCCATTAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR TCA 90 bp TTCCCATTACAGTACATAACAGAACATCAATGGTTTGGGGACCATCATCATGTCCCCCAAACAAATGACTaGAACCAACCAAACCAAAAC +
Preference number: 4 (lower is better)
Translates to: FPLQYITEHQWFGDHHHVPQTND*NQPNQN
Trigger: GTTTTGGTTTGGTTGGTTTCAGTCATTTGTTTGGGG...GACATGATGATGGTCCCCAAACCATTGATGTTCTGTTATGTACTGTAATGGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR TCA 90 bp TGGCACAAGAAAGCAACTATGATCCCTTTTCTATGGTTGGAAAAAGTTGAGAATAAACAGGGTTTGGGGTaGGAAACAGACTCTTACCCA +
Preference number: 4 (lower is better)
Translates to: WHKKATMIPFLWLEKVENKQGLG*ETDSYP
Trigger: TGGGTAAGAGTCTGTTTCTCACCCCAAACCCTGTTT...ATTCTCAACTTTTTCCAACCATAGAAAAGGGATCATAGTTGCTTTCTTGTGCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR TCA 90 bp ACATTCAAGTCAGGCTGTCTTTGTGCAGAGCTATTAAACCAACCGATAAATTTTAAACAGGGTTTGGGGTaGGAAACAGACTCTTACCCA +
Preference number: 4 (lower is better)
Translates to: TFKSGCLCAELLNQPINFKQGLG*ETDSYP
Trigger: TGGGTAAGAGTCTGTTTCTCACCCCAAACCCTGTTT...AAAATTTATCGGTTGGTTTAATAGCTCTGCACAAAGACAGCCTGACTTGAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR TCA 90 bp GCTAATGGCAGGATAAACGCATCAACCACCATCTGTACTAAAGCAGAGTGTTTCGAAGCTCTGGTCTTTTaGTTAAATACACTGAAGTGT +
Preference number: 4 (lower is better)
Translates to: ANGRINASTTICTKAECFEALVF*LNTLKC
Trigger: ACACTTCAGTGTATTTAATCAAAAGACCAGAGCTTC...GAAACACTCTGCTTTAGTACAGATGGTGGTTGATGCGTTTATCCTGCCATTAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR TCA 90 bp CAGTGTATGTGTAATATAGACATTCAAGTCAGGCTGTCTTTGTGCAGAGCTATTGAATGCTTAAGGCTATaGCTGCATATAGGGCCTCAT +
Preference number: 4 (lower is better)
Translates to: QCMCNIDIQVRLSLCRAIECLRL*LHIGPH
Trigger: ATGAGGCCCTATATGCAGTCATAGCCTTAAGCATTC...AATAGCTCTGCACAAAGACAGCCTGACTTGAATGTCTATATTACACATACACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR TCA 90 bp GCTAATGGCAGGATAAACGCATCAACCACCATCTGTACTAAAGCAGAGTGTTTCTTCACTAGGGGAAGATaGATGTATTTTGAGCCTAAA +
Preference number: 4 (lower is better)
Translates to: ANGRINASTTICTKAECFFTRGR*MYFEPK
Trigger: TTTAGGCTCAAAATACATTCATCTTCCCCTAGTGAA...GAAACACTCTGCTTTAGTACAGATGGTGGTTGATGCGTTTATCCTGCCATTAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR TCA 90 bp CAAACACAGATAACAAGTTGGCAAAGATGTGGAGAAATTGGAACCCTTGTGCACGGATTTCCCATCAAGTaGTTGAGGCTGTTTAATTCA +
Preference number: 4 (lower is better)
Translates to: QTQITSWQRCGEIGTLVHGFPIK*LRLFNS
Trigger: TGAATTAAACAGCCTCAATCACTTGATGGGAAATCC...GTGCACAAGGGTTCCAATTTCTCCACATCTTTGCCAACTTGTTATCTGTGTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR TCA 90 bp CAAACACAGATAACAAGTTGGCAAAGATGTGGAGAAATTGGAACCCTTGTGCACGTCAAAGCTTTTCAGTaGAGTCACGTCAGAAAACAT +
Preference number: 4 (lower is better)
Translates to: QTQITSWQRCGEIGTLVHVKAFQ*SHVRKH
Trigger: ATGTTTTCTGACGTGACTTCACTGAAAAGCTTTGAC...GTGCACAAGGGTTCCAATTTCTCCACATCTTTGCCAACTTGTTATCTGTGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515384.2
CDS-3UTR GCA 90 bp ATGTCATTTACATATGTGCAGTTTCACGTGAATATGCATAATCTTCCTGGTATGAAATGCTGGGCATGGTaGCACCCGATTTCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: MSFTYVQFHVNMHNLPGMKCWAW*HPISSS
Trigger: AGAAGAGGAAATCGGGTGGCACCATGCCCAGCATTT...CATACCAGGAAGATTATGCATATTCACGTGAAACTGCACATATGTAAATGACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR GCA 90 bp TTTGACTTTTTCCTGTCTAATTTGGGCAGCCTTTCAACTAAAGGAAGTCAATCAATCAGTGGTCCCCTCTaGTCATCAGGTAAATACCTG +
Preference number: 4 (lower is better)
Translates to: FDFFLSNLGSLSTKGSQSISGPL*SSGKYL
Trigger: CAGGTATTTACCTGATGAGCAGAGGGGACCACTGAT...TGATTGACTTCCTTTAGTTGAAAGGCTGCCCAAATTAGACAGGAAAAAGTCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR GCA 90 bp TTTAAAATGGGGAATGGCCTACTTTCTGCTACTGGCTCAATTTGCTTTCCTTTGGAATGGCCTACTTTCTaGTACTGGCTCAATTTGCTT +
Preference number: 4 (lower is better)
Translates to: FKMGNGLLSATGSICFPLEWPTF*YWLNLL
Trigger: AAGCAAATTGAGCCAGTAGCAGAAAGTAGGCCATTC...CAAAGGAAAGCAAATTGAGCCAGTAGCAGAAAGTAGGCCATTCCCCATTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR GCA 90 bp CAAACACAGATAACAAGTTGGCAAAGATGTGGAGAAATTGGAACCCTTGTGCACAAAAGAAGGAAATCCTaGCATAAGCAACAACATGGC +
Preference number: 4 (lower is better)
Translates to: QTQITSWQRCGEIGTLVHKRRKS*HKQQHG
Trigger: GCCATGTTGTTGCTTATGGCAGGATTTCCTTCTTTT...GTGCACAAGGGTTCCAATTTCTCCACATCTTTGCCAACTTGTTATCTGTGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp ATGTCATTTACATATGTGCAGTTTCACGTGAATATGCATAATCTTCCTGGTATGGCAGAGCCATTCCTCTaGGACACCAGCACAATAGAT +
Preference number: 4 (lower is better)
Translates to: MSFTYVQFHVNMHNLPGMAEPFL*DTSTID
Trigger: ATCTATTGTGCTGGTGTCCCAGAGGAATGGCTCTGC...CATACCAGGAAGATTATGCATATTCACGTGAAACTGCACATATGTAAATGACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp TTCCCATTACAGTACATAACAGAACATCAATGGTTTGGGGACCATCATCATGTCATTACCTACCCCACATaGCTGTTAAGAGGACTAAGT +
Preference number: 4 (lower is better)
Translates to: FPLQYITEHQWFGDHHHVITYPT*LLRGLS
Trigger: ACTTAGTCCTCTTAACAGCCATGTGGGGTAGGTAAT...GACATGATGATGGTCCCCAAACCATTGATGTTCTGTTATGTACTGTAATGGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR TCA 90 bp TTTAAAATGGGGAATGGCCTACTTTCTGCTACTGGCTCAATTTGCTTTCCTTTGGTATTTTCCACACAGTaGTACAGCAAAGGGTTTTGT +
Preference number: 4 (lower is better)
Translates to: FKMGNGLLSATGSICFPLVFSTQ*YSKGFC
Trigger: ACAAAACCCTTTGCTGTATCACTGTGTGGAAAATAC...CAAAGGAAAGCAAATTGAGCCAGTAGCAGAAAGTAGGCCATTCCCCATTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR TCA 90 bp TTCCCATTACAGTACATAACAGAACATCAATGGTTTGGGGACCATCATCATGTCTTCCCATCAAGTGATTaGGGCTGTTTAATTCATTGC +
Preference number: 4 (lower is better)
Translates to: FPLQYITEHQWFGDHHHVFPSSD*GCLIHC
Trigger: GCAATGAATTAAACAGCCTCAATCACTTGATGGGAA...GACATGATGATGGTCCCCAAACCATTGATGTTCTGTTATGTACTGTAATGGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR TCA 90 bp TTTAAAATGGGGAATGGCCTACTTTCTGCTACTGGCTCAATTTGCTTTCCTTTGACAAGAAAGCAACTATaGTCCCTTTTCTATGGTTGG +
Preference number: 4 (lower is better)
Translates to: FKMGNGLLSATGSICFPLTRKQL*SLFYGW
Trigger: CCAACCATAGAAAAGGGATCATAGTTGCTTTCTTGT...CAAAGGAAAGCAAATTGAGCCAGTAGCAGAAAGTAGGCCATTCCCCATTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR TCA 90 bp TTCCCATTACAGTACATAACAGAACATCAATGGTTTGGGGACCATCATCATGTCACAAGAAAGCAACTATaGTCCCTTTTCTATGGTTGG +
Preference number: 4 (lower is better)
Translates to: FPLQYITEHQWFGDHHHVTRKQL*SLFYGW
Trigger: CCAACCATAGAAAAGGGATCATAGTTGCTTTCTTGT...GACATGATGATGGTCCCCAAACCATTGATGTTCTGTTATGTACTGTAATGGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR TCA 90 bp TTCCCATTACAGTACATAACAGAACATCAATGGTTTGGGGACCATCATCATGTCTATGCTTTGAATGAATaGTACCCTGTCAGGGAAGAA +
Preference number: 4 (lower is better)
Translates to: FPLQYITEHQWFGDHHHVYALNE*YPVREE
Trigger: TTCTTCCCTGACAGGGTATCATTCATTCAAAGCATA...GACATGATGATGGTCCCCAAACCATTGATGTTCTGTTATGTACTGTAATGGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR TCA 90 bp CAGTGTATGTGTAATATAGACATTCAAGTCAGGCTGTCTTTGTGCAGAGCTATTAGGTCTGAGAGTATCTaGGAAGGTATAGTATGTCTC +
Preference number: 4 (lower is better)
Translates to: QCMCNIDIQVRLSLCRAIRSESI*EGIVCL
Trigger: GAGACATACTATACCTTCTCAGATACTCTCAGACCT...AATAGCTCTGCACAAAGACAGCCTGACTTGAATGTCTATATTACACATACACTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR GCA 90 bp ACATTCAAGTCAGGCTGTCTTTGTGCAGAGCTATTAAACCAACCGATAAATTTTCTCTTCCTCTTGGTCTaGAATAATATCTCCACAGCC +
Preference number: 4 (lower is better)
Translates to: TFKSGCLCAELLNQPINFLFLLV*NNISTA
Trigger: GGCTGTGGAGATATTATTGCAGACCAAGAGGAAGAG...AAAATTTATCGGTTGGTTTAATAGCTCTGCACAAAGACAGCCTGACTTGAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR GCA 90 bp ATGTCATTTACATATGTGCAGTTTCACGTGAATATGCATAATCTTCCTGGTATGATCAGTGGTCCCCTCTaGTCATCAGGTAAATACCTG +
Preference number: 4 (lower is better)
Translates to: MSFTYVQFHVNMHNLPGMISGPL*SSGKYL
Trigger: CAGGTATTTACCTGATGAGCAGAGGGGACCACTGAT...CATACCAGGAAGATTATGCATATTCACGTGAAACTGCACATATGTAAATGACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR GCA 90 bp TTAACAATGAAGGGGAGCAAAGCATACGTGAATGTACTGGAACAGGTCTCAGCAATGGATCTGAGACAATaGAATAAAAGCCAGTCATAT +
Preference number: 4 (lower is better)
Translates to: LTMKGSKAYVNVLEQVSAMDLRQ*NKSQSY
Trigger: ATATGACTGGCTTTTATTGCATTGTCTCAGATCCAT...TGCTGAGACCTGTTCCAGTACATTCACGTATGCTTTGCTCCCCTTCATTGTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR GCA 90 bp ATGTCATTTACATATGTGCAGTTTCACGTGAATATGCATAATCTTCCTGGTATGTTAGGAGACATGAGCTaGCTGAGTGGATCTCTTCAC +
Preference number: 4 (lower is better)
Translates to: MSFTYVQFHVNMHNLPGMLGDMS*LSGSLH
Trigger: GTGAAGAGATCCACTCAGGCAGCTCATGTCTCCTAA...CATACCAGGAAGATTATGCATATTCACGTGAAACTGCACATATGTAAATGACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp ACATTCAAGTCAGGCTGTCTTTGTGCAGAGCTATTAAACCAACCGATAAATTTTCCTGCCTCTTCCTCTTaGTCTGCAATAATATCTCCA +
Preference number: 4 (lower is better)
Translates to: TFKSGCLCAELLNQPINFPASSS*SAIISP
Trigger: TGGAGATATTATTGCAGACCAAGAGGAAGAGGCAGG...AAAATTTATCGGTTGGTTTAATAGCTCTGCACAAAGACAGCCTGACTTGAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp ATGTCATTTACATATGTGCAGTTTCACGTGAATATGCATAATCTTCCTGGTATGAAAAGTTGTATTCCTTaGCATGGGGCCCATCCACCT +
Preference number: 4 (lower is better)
Translates to: MSFTYVQFHVNMHNLPGMKSCIP*HGAHPP
Trigger: AGGTGGATGGGCCCCATGCCAAGGAATACAACTTTT...CATACCAGGAAGATTATGCATATTCACGTGAAACTGCACATATGTAAATGACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp CAAACACAGATAACAAGTTGGCAAAGATGTGGAGAAATTGGAACCCTTGTGCACATAACAGAACATCAATaGTTTGGGGACCATCATCAT +
Preference number: 4 (lower is better)
Translates to: QTQITSWQRCGEIGTLVHITEHQ*FGDHHH
Trigger: ATGATGATGGTCCCCAAACCATTGATGTTCTGTTAT...GTGCACAAGGGTTCCAATTTCTCCACATCTTTGCCAACTTGTTATCTGTGTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp TTCCCATTACAGTACATAACAGAACATCAATGGTTTGGGGACCATCATCATGTCCCTACTTTCTGCTACTaGCTCAATTTGCTTTCCTTT +
Preference number: 4 (lower is better)
Translates to: FPLQYITEHQWFGDHHHVPTFCY*LNLLSF
Trigger: AAAGGAAAGCAAATTGAGCCAGTAGCAGAAAGTAGG...GACATGATGATGGTCCCCAAACCATTGATGTTCTGTTATGTACTGTAATGGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp ACATTCAAGTCAGGCTGTCTTTGTGCAGAGCTATTAAACCAACCGATAAATTTTCAGATGCAACCACTGTaGAAAGCAGCACAGAAGTTT +
Preference number: 4 (lower is better)
Translates to: TFKSGCLCAELLNQPINFQMQPL*KAAQKF
Trigger: AAACTTCTGTGCTGCTTTCCACAGTGGTTGCATCTG...AAAATTTATCGGTTGGTTTAATAGCTCTGCACAAAGACAGCCTGACTTGAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp TTTAAAATGGGGAATGGCCTACTTTCTGCTACTGGCTCAATTTGCTTTCCTTTGAAGTTGGCAAAGATGTaGAGAAATTGGAACCCTTGT +
Preference number: 4 (lower is better)
Translates to: FKMGNGLLSATGSICFPLKLAKM*RNWNPC
Trigger: ACAAGGGTTCCAATTTCTCCACATCTTTGCCAACTT...CAAAGGAAAGCAAATTGAGCCAGTAGCAGAAAGTAGGCCATTCCCCATTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp TTAACAATGAAGGGGAGCAAAGCATACGTGAATGTACTGGAACAGGTCTCAGCAACACAGATAACAAGTTaGCAAAGATGTGGAGAAATT +
Preference number: 4 (lower is better)
Translates to: LTMKGSKAYVNVLEQVSATQITS*QRCGEI
Trigger: AATTTCTCCACATCTTTGCCAACTTGTTATCTGTGT...TGCTGAGACCTGTTCCAGTACATTCACGTATGCTTTGCTCCCCTTCATTGTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR CAA 72 bp AGTTTCAGTTACGCAGGATGCATAGGTGAGAGAGATTaGCTGTACAACACTGTGGCTATAGTTAACAATACT +
Preference number: 4 (lower is better)
Translates to: SFSYAGCIGERD*LYNTVAIVNNT
Trigger: AGTATTGTTAACTATAGCCACAGTGTTGTACAGCAAATCTCTCTCACCTATGCATCCTGCGTAACTGAAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR TCA 90 bp ACATTCAAGTCAGGCTGTCTTTGTGCAGAGCTATTAAACCAACCGATAAATTTTCCCCAAACAAATGACTaGAACCAACCAAACCAAAAC +
Preference number: 4 (lower is better)
Translates to: TFKSGCLCAELLNQPINFPQTND*NQPNQN
Trigger: GTTTTGGTTTGGTTGGTTTCAGTCATTTGTTTGGGG...AAAATTTATCGGTTGGTTTAATAGCTCTGCACAAAGACAGCCTGACTTGAATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR TCA 90 bp ACATTCAAGTCAGGCTGTCTTTGTGCAGAGCTATTAAACCAACCGATAAATTTTGCCAGTGTCATATTCTaGACACACTTGTCTTTGTCA +
Preference number: 4 (lower is better)
Translates to: TFKSGCLCAELLNQPINFASVIF*THLSLS
Trigger: TGACAAAGACAAGTGTGTTCAGAATATGACACTGGC...AAAATTTATCGGTTGGTTTAATAGCTCTGCACAAAGACAGCCTGACTTGAATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR TCA 90 bp TTTAAAATGGGGAATGGCCTACTTTCTGCTACTGGCTCAATTTGCTTTCCTTTGTGTGAGATGCTTATATaGATTCTTGGTAGTGTGTTC +
Preference number: 4 (lower is better)
Translates to: FKMGNGLLSATGSICFPLCEMLI*ILGSVF
Trigger: GAACACACTACCAAGAATTCATATAAGCATCTCACA...CAAAGGAAAGCAAATTGAGCCAGTAGCAGAAAGTAGGCCATTCCCCATTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR TCA 90 bp TGGCACAAGAAAGCAACTATGATCCCTTTTCTATGGTTGGAAAAAGTTGAGAATCCCAAATCCTTTATTTaGTTGGTGTGGGTGCAATTC +
Preference number: 4 (lower is better)
Translates to: WHKKATMIPFLWLEKVENPKSFI*LVWVQF
Trigger: GAATTGCACCCACACCAATCAAATAAAGGATTTGGG...ATTCTCAACTTTTTCCAACCATAGAAAAGGGATCATAGTTGCTTTCTTGTGCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR TCA 90 bp TTTAAAATGGGGAATGGCCTACTTTCTGCTACTGGCTCAATTTGCTTTCCTTTGTTTTCGCCCAACAATTaGTTTGACTTTTTCCTGTCT +
Preference number: 4 (lower is better)
Translates to: FKMGNGLLSATGSICFPLFSPNN*FDFFLS
Trigger: AGACAGGAAAAAGTCAAATCAATTGTTGGGCGAAAA...CAAAGGAAAGCAAATTGAGCCAGTAGCAGAAAGTAGGCCATTCCCCATTTTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR TCA 90 bp ACATTCAAGTCAGGCTGTCTTTGTGCAGAGCTATTAAACCAACCGATAAATTTTTCCTCAGTGATGAGATaGGGCAATTGTGATGCTTAT +
Preference number: 4 (lower is better)
Translates to: TFKSGCLCAELLNQPINFSSVMR*GNCDAY
Trigger: ATAAGCATCACAATTGCCTCATCTCATCACTGAGGA...AAAATTTATCGGTTGGTTTAATAGCTCTGCACAAAGACAGCCTGACTTGAATGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR GCA 90 bp TTTAAAATGGGGAATGGCCTACTTTCTGCTACTGGCTCAATTTGCTTTCCTTTGCACGTGAGTGTGAGATaGTTATATGAATTCTTGGTA +
Preference number: 4 (lower is better)
Translates to: FKMGNGLLSATGSICFPLHVSVR*LYEFLV
Trigger: TACCAAGAATTCATATAAGCATCTCACACTCACGTG...CAAAGGAAAGCAAATTGAGCCAGTAGCAGAAAGTAGGCCATTCCCCATTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR GCA 90 bp TTCCCATTACAGTACATAACAGAACATCAATGGTTTGGGGACCATCATCATGTCCACGTGAGTGTGAGATaGTTATATGAATTCTTGGTA +
Preference number: 4 (lower is better)
Translates to: FPLQYITEHQWFGDHHHVHVSVR*LYEFLV
Trigger: TACCAAGAATTCATATAAGCATCTCACACTCACGTG...GACATGATGATGGTCCCCAAACCATTGATGTTCTGTTATGTACTGTAATGGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR GCA 90 bp TTCCCATTACAGTACATAACAGAACATCAATGGTTTGGGGACCATCATCATGTCAAATTGGAACCCTTGTaGACCATTGGTAAGTATGTA +
Preference number: 4 (lower is better)
Translates to: FPLQYITEHQWFGDHHHVKLEPL*TIGKYV
Trigger: TACATACTTACCAATGGTGCACAAGGGTTCCAATTT...GACATGATGATGGTCCCCAAACCATTGATGTTCTGTTATGTACTGTAATGGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp ACATTCAAGTCAGGCTGTCTTTGTGCAGAGCTATTAAACCAACCGATAAATTTTTGGCTCTTTCAGCTTTaGAGGTATTTTCCACACAGT +
Preference number: 4 (lower is better)
Translates to: TFKSGCLCAELLNQPINFWLFQL*RYFPHS
Trigger: ACTGTGTGGAAAATACCTCCAAAGCTGAAAGAGCCA...AAAATTTATCGGTTGGTTTAATAGCTCTGCACAAAGACAGCCTGACTTGAATGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp CAGTGTATGTGTAATATAGACATTCAAGTCAGGCTGTCTTTGTGCAGAGCTATTAGAACATCAATGGTTTaGGGACCATCATCATGTCTA +
Preference number: 4 (lower is better)
Translates to: QCMCNIDIQVRLSLCRAIRTSMV*GPSSCL
Trigger: TAGACATGATGATGGTCCCCAAACCATTGATGTTCT...AATAGCTCTGCACAAAGACAGCCTGACTTGAATGTCTATATTACACATACACTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp TTTAAAATGGGGAATGGCCTACTTTCTGCTACTGGCTCAATTTGCTTTCCTTTGATAACAGAACATCAATaGTTTGGGGACCATCATCAT +
Preference number: 4 (lower is better)
Translates to: FKMGNGLLSATGSICFPLITEHQ*FGDHHH
Trigger: ATGATGATGGTCCCCAAACCATTGATGTTCTGTTAT...CAAAGGAAAGCAAATTGAGCCAGTAGCAGAAAGTAGGCCATTCCCCATTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp TTTAAAATGGGGAATGGCCTACTTTCTGCTACTGGCTCAATTTGCTTTCCTTTGTTTTCCTGTCTAATTTaGGCAGCCTTTCAACTAAAG +
Preference number: 4 (lower is better)
Translates to: FKMGNGLLSATGSICFPLFSCLI*AAFQLK
Trigger: CTTTAGTTGAAAGGCTGCCCAAATTAGACAGGAAAA...CAAAGGAAAGCAAATTGAGCCAGTAGCAGAAAGTAGGCCATTCCCCATTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp TTTGACTTTTTCCTGTCTAATTTGGGCAGCCTTTCAACTAAAGGAAGTCAATCAATTACCTACCCCACATaGCTGTTAAGAGGACTAAGT +
Preference number: 4 (lower is better)
Translates to: FDFFLSNLGSLSTKGSQSITYPT*LLRGLS
Trigger: ACTTAGTCCTCTTAACAGCCATGTGGGGTAGGTAAT...TGATTGACTTCCTTTAGTTGAAAGGCTGCCCAAATTAGACAGGAAAAAGTCAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp ATGTCATTTACATATGTGCAGTTTCACGTGAATATGCATAATCTTCCTGGTATGCAGATGCAACCACTGTaGAAAGCAGCACAGAAGTTT +
Preference number: 4 (lower is better)
Translates to: MSFTYVQFHVNMHNLPGMQMQPL*KAAQKF
Trigger: AAACTTCTGTGCTGCTTTCCACAGTGGTTGCATCTG...CATACCAGGAAGATTATGCATATTCACGTGAAACTGCACATATGTAAATGACAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR TCA 90 bp TTTGACTTTTTCCTGTCTAATTTGGGCAGCCTTTCAACTAAAGGAAGTCAATCAGTATTTTCCACACAGTaGTACAGCAAAGGGTTTTGT +
Preference number: 4 (lower is better)
Translates to: FDFFLSNLGSLSTKGSQSVFSTQ*YSKGFC
Trigger: ACAAAACCCTTTGCTGTATCACTGTGTGGAAAATAC...TGATTGACTTCCTTTAGTTGAAAGGCTGCCCAAATTAGACAGGAAAAAGTCAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR TCA 90 bp TGGCACAAGAAAGCAACTATGATCCCTTTTCTATGGTTGGAAAAAGTTGAGAATATGTGCAGTTTCACGTaGATATGCATAATCTTCCTG +
Preference number: 4 (lower is better)
Translates to: WHKKATMIPFLWLEKVENMCSFT*ICIIFL
Trigger: CAGGAAGATTATGCATATTCACGTGAAACTGCACAT...ATTCTCAACTTTTTCCAACCATAGAAAAGGGATCATAGTTGCTTTCTTGTGCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR TCA 90 bp CAGTGTATGTGTAATATAGACATTCAAGTCAGGCTGTCTTTGTGCAGAGCTATTCAATCTCTCTGGAAATaGGACTTATACAGAAGTGTT +
Preference number: 4 (lower is better)
Translates to: QCMCNIDIQVRLSLCRAIQSLWK*DLYRSV
Trigger: AACACTTCTGTATAAGTCTCATTTCCAGAGAGATTG...AATAGCTCTGCACAAAGACAGCCTGACTTGAATGTCTATATTACACATACACTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR TCA 90 bp ACATTCAAGTCAGGCTGTCTTTGTGCAGAGCTATTAAACCAACCGATAAATTTTTATGCTTTGAATGAATaGTACCCTGTCAGGGAAGAA +
Preference number: 4 (lower is better)
Translates to: TFKSGCLCAELLNQPINFYALNE*YPVREE
Trigger: TTCTTCCCTGACAGGGTATCATTCATTCAAAGCATA...AAAATTTATCGGTTGGTTTAATAGCTCTGCACAAAGACAGCCTGACTTGAATGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR GCA 90 bp ACATTCAAGTCAGGCTGTCTTTGTGCAGAGCTATTAAACCAACCGATAAATTTTGCTACTGGCTCAATTTaGTTTCCTTTGATGTCCATT +
Preference number: 4 (lower is better)
Translates to: TFKSGCLCAELLNQPINFATGSI*FPLMSI
Trigger: AATGGACATCAAAGGAAAGCAAATTGAGCCAGTAGC...AAAATTTATCGGTTGGTTTAATAGCTCTGCACAAAGACAGCCTGACTTGAATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp TTTGACTTTTTCCTGTCTAATTTGGGCAGCCTTTCAACTAAAGGAAGTCAATCAACACAGCATCCTCTCTaGCAACATAGTAAACATACA +
Preference number: 4 (lower is better)
Translates to: FDFFLSNLGSLSTKGSQSTQHPL*QHSKHT
Trigger: TGTATGTTTACTATGTTGCCAGAGAGGATGCTGTGT...TGATTGACTTCCTTTAGTTGAAAGGCTGCCCAAATTAGACAGGAAAAAGTCAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR TCA 90 bp ACATTCAAGTCAGGCTGTCTTTGTGCAGAGCTATTAAACCAACCGATAAATTTTCTTGAAGACTACCTCTaGGATGAAGAAATAAATCCT +
Preference number: 4 (lower is better)
Translates to: TFKSGCLCAELLNQPINFLEDYL*DEEINP
Trigger: AGGATTTATTTCTTCATCTCAGAGGTAGTCTTCAAG...AAAATTTATCGGTTGGTTTAATAGCTCTGCACAAAGACAGCCTGACTTGAATGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR GCA 90 bp CAGTGTATGTGTAATATAGACATTCAAGTCAGGCTGTCTTTGTGCAGAGCTATTATGGATCTGAGACAATaGAATAAAAGCCAGTCATAT +
Preference number: 4 (lower is better)
Translates to: QCMCNIDIQVRLSLCRAIMDLRQ*NKSQSY
Trigger: ATATGACTGGCTTTTATTGCATTGTCTCAGATCCAT...AATAGCTCTGCACAAAGACAGCCTGACTTGAATGTCTATATTACACATACACTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR GCA 90 bp TTTGACTTTTTCCTGTCTAATTTGGGCAGCCTTTCAACTAAAGGAAGTCAATCAAAATTGGAACCCTTGTaGACCATTGGTAAGTATGTA +
Preference number: 4 (lower is better)
Translates to: FDFFLSNLGSLSTKGSQSKLEPL*TIGKYV
Trigger: TACATACTTACCAATGGTGCACAAGGGTTCCAATTT...TGATTGACTTCCTTTAGTTGAAAGGCTGCCCAAATTAGACAGGAAAAAGTCAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR TCA 90 bp ATGTCATTTACATATGTGCAGTTTCACGTGAATATGCATAATCTTCCTGGTATGTTTTCGCCCAACAATTaGTTTGACTTTTTCCTGTCT +
Preference number: 4 (lower is better)
Translates to: MSFTYVQFHVNMHNLPGMFSPNN*FDFFLS
Trigger: AGACAGGAAAAAGTCAAATCAATTGTTGGGCGAAAA...CATACCAGGAAGATTATGCATATTCACGTGAAACTGCACATATGTAAATGACAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR TCA 90 bp ATGTCATTTACATATGTGCAGTTTCACGTGAATATGCATAATCTTCCTGGTATGCTTGAAGACTACCTCTaGGATGAAGAAATAAATCCT +
Preference number: 4 (lower is better)
Translates to: MSFTYVQFHVNMHNLPGMLEDYL*DEEINP
Trigger: AGGATTTATTTCTTCATCTCAGAGGTAGTCTTCAAG...CATACCAGGAAGATTATGCATATTCACGTGAAACTGCACATATGTAAATGACAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR GCA 90 bp TTTGACTTTTTCCTGTCTAATTTGGGCAGCCTTTCAACTAAAGGAAGTCAATCAAAGCAAAGGGCTATTTaGATACTGTTTAACTGCAAA +
Preference number: 4 (lower is better)
Translates to: FDFFLSNLGSLSTKGSQSKQRAI*ILFNCK
Trigger: TTTGCAGTTAAACAGTATGCAAATAGCCCTTTGCTT...TGATTGACTTCCTTTAGTTGAAAGGCTGCCCAAATTAGACAGGAAAAAGTCAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp ATGTCATTTACATATGTGCAGTTTCACGTGAATATGCATAATCTTCCTGGTATGTTTTCCTGTCTAATTTaGGCAGCCTTTCAACTAAAG +
Preference number: 4 (lower is better)
Translates to: MSFTYVQFHVNMHNLPGMFSCLI*AAFQLK
Trigger: CTTTAGTTGAAAGGCTGCCCAAATTAGACAGGAAAA...CATACCAGGAAGATTATGCATATTCACGTGAAACTGCACATATGTAAATGACAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CCA 90 bp TGGCACAAGAAAGCAACTATGATCCCTTTTCTATGGTTGGAAAAAGTTGAGAATACACAGATAACAAGTTaGCAAAGATGTGGAGAAATT +
Preference number: 4 (lower is better)
Translates to: WHKKATMIPFLWLEKVENTQITS*QRCGEI
Trigger: AATTTCTCCACATCTTTGCCAACTTGTTATCTGTGT...ATTCTCAACTTTTTCCAACCATAGAAAAGGGATCATAGTTGCTTTCTTGTGCCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR CAA 72 bp TATTTTCTCCATTCACTAGGGGAAGATGAATGTATTTaGAGCCTAAATAGTACCAGCGGCATGAAATCAAAT +
Preference number: 4 (lower is better)
Translates to: YFLHSLGEDECI*SLNSTSGMKSN
Trigger: ATTTGATTTCATGCCGCTGGTACTATTTAGGCTCAAAATACATTCATCTTCCCCTAGTGAATGGAGAAAATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR CAA 72 bp TTAAACCAACCGATAAATTTTCGCCCAACAATTGATTaGACTTTTTCCTGTCTAATTTGGGCAGCCTTTCAA +
Preference number: 4 (lower is better)
Translates to: LNQPINFRPTID*TFSCLIWAAFQ
Trigger: TTGAAAGGCTGCCCAAATTAGACAGGAAAAAGTCAAATCAATTGTTGGGCGAAAATTTATCGGTTGGTTTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
3UTR CAA 72 bp TGTATGTGTAATATAGACATTCAAGTCAGGCTGTCTTaGTGCAGAGCTATTAAACCAACCGATAAATTTTCG +
Preference number: 4 (lower is better)
Translates to: CMCNIDIQVRLS*CRAIKPTDKFS
Trigger: CGAAAATTTATCGGTTGGTTTAATAGCTCTGCACAAAGACAGCCTGACTTGAATGTCTATATTACACATACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR GCA 90 bp ATGTCATTTACATATGTGCAGTTTCACGTGAATATGCATAATCTTCCTGGTATGAAGCAAAGGGCTATTTaGATACTGTTTAACTGCAAA +
Preference number: 4 (lower is better)
Translates to: MSFTYVQFHVNMHNLPGMKQRAI*ILFNCK
Trigger: TTTGCAGTTAAACAGTATGCAAATAGCCCTTTGCTT...CATACCAGGAAGATTATGCATATTCACGTGAAACTGCACATATGTAAATGACAT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS TCA 90 bp TCCTCCTGCAGACCCCCACGGACGCGCCAGCTCCGCCGCGCTCGCTaGCAGCCCCGCCGCCGCCGCGGCTCCGGCTCGTCTCCATGGAAA +
Preference number: 5 (lower is better)
Translates to: SSCRPPRTRQLRRAR*QPRRRRGSGSSPWK
Trigger: TTTCCATGGAGACGAGCCGGAGCCGCGGCGGCGGCGGGGCTGTCAGCGAGCGCGGCGGAGCTGGCGCGTCCGTGGGGGTCTGCAGGAGGA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS GCA 90 bp GGCGGCCGGCGTTTCGGCGGCACAGTCACAATGCAAGTCCATGTCTaGCGCGAGGGTCCCGGTCCCGGCCCCGGCCTCCGCCTTCCTCCT +
Preference number: 5 (lower is better)
Translates to: GGRRFGGTVTMQVHV*REGPGPGPGLRLPP
Trigger: AGGAGGAAGGCGGAGGCCGGGGCCGGGACCGGGACCCTCGCGGCAGACATGGACTTGCATTGTGACTGTGCCGCCGAAACGCCGGCCGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS GCA 90 bp GTGGATCGACAGAGGCAGGGTCTGGGGCGGCGGGCGCCCGGCCGCTaGCGCCTTCGGAGTCGACAAGGGGGACCGTCTTTACGGGAACGG +
Preference number: 5 (lower is better)
Translates to: VDRQRQGLGRRAPGR*RLRSRQGGPSLRER
Trigger: CCGTTCCCGTAAAGACGGTCCCCCTTGTCGACTCCGAAGGCGGCAGCGGCCGGGCGCCCGCCGCCCCAGACCCTGCCTCTGTCGATCCAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515384.2
CDS GCA 90 bp GGTGTCTTTGGGGGTCTCGGGCACCACCTTGGTTTCCAGCGCAGCTaGCACCTTAGCCGCGCCCTCCTGGGGCTCGGGTCCCTGCTCCTC +
Preference number: 5 (lower is better)
Translates to: GVFGGLGHHLGFQRS*HLSRALLGLGSLLL
Trigger: GAGGAGCAGGGACCCGAGCCCCAGGAGGGCGCGGCTAAGGTGGCAGCTGCGCTGGAAACCAAGGTGGTGCCCGAGACCCCCAAAGACACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS GCA 90 bp CGTCCCCGCTGTAGCTATCCCGGGGGATGCCCGCCTTCTTCCCGCTaGTCGAGCTGTCTTCCTCTGGGCCTGGCGTGGTGGAGTCCCAGT +
Preference number: 5 (lower is better)
Translates to: RPRCSYPGGCPPSSR*SSCLPLGLAWWSPS
Trigger: ACTGGGACTCCACCACGCCAGGCCCAGAGGAAGACAGCTCGAGCAGCGGGAAGAAGGCGGGCATCCCCCGGGATAGCTACAGCGGGGACG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS CCA 90 bp GATGCCCGCCTTCTTCCCGCTGCTCGAGCTGTCTTCCTCTGGGCCTaGCGTGGTGGAGTCCCAGTAGCCCTCGTCGCTGTTGGGGACGCC +
Preference number: 5 (lower is better)
Translates to: DARLLPAARAVFLWA*RGGVPVALVAVGDA
Trigger: GGCGTCCCCAACAGCGACGAGGGCTACTGGGACTCCACCACGCCAGGCCCAGAGGAAGACAGCTCGAGCAGCGGGAAGAAGGCGGGCATC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS CCA 90 bp CCGCCTTCTTCCCGCTGCTCGAGCTGTCTTCCTCTGGGCCTGGCGTaGTGGAGTCCCAGTAGCCCTCGTCGCTGTTGGGGACGCCTTCCT +
Preference number: 5 (lower is better)
Translates to: PPSSRCSSCLPLGLA*WSPSSPRRCWGRLP
Trigger: AGGAAGGCGTCCCCAACAGCGACGAGGGCTACTGGGACTCCACCACGCCAGGCCCAGAGGAAGACAGCTCGAGCAGCGGGAAGAAGGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS CCA 90 bp CCTTCTTCCCGCTGCTCGAGCTGTCTTCCTCTGGGCCTGGCGTGGTaGAGTCCCAGTAGCCCTCGTCGCTGTTGGGGACGCCTTCCTGCT +
Preference number: 5 (lower is better)
Translates to: PSSRCSSCLPLGLAW*SPSSPRRCWGRLPA
Trigger: AGCAGGAAGGCGTCCCCAACAGCGACGAGGGCTACTGGGACTCCACCACGCCAGGCCCAGAGGAAGACAGCTCGAGCAGCGGGAAGAAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS GCA 90 bp CCCTCGTCGCTGTTGGGGACGCCTTCCTGCTGCTCCTTCTCCGGGTaGTTGGGCTCCTCCTTAGGATGGGGCTCGATGGGAATCCGGTTG +
Preference number: 5 (lower is better)
Translates to: PSSLLGTPSCCSFSG*LGSSLGWGSMGIRL
Trigger: CAACCGGATTCCCATCGAGCCCCATCCTAAGGAGGAGCCCAAGCACCCGGAGAAGGAGCAGCAGGAAGGCGTCCCCAACAGCGACGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS CCA 90 bp TGTCCCAGAACTCCTGTAGATAGGTGTCGTCCACCTCGTCCGGGCTaGCCATCTCTTCCCCGCCTCCTTGGTAGGCCACCACGCCGGGGT +
Preference number: 5 (lower is better)
Translates to: CPRTPVDRCRPPRPG*PSLPRLLGRPPRRG
Trigger: ACCCCGGCGTGGTGGCCTACCAAGGAGGCGGGGAAGAGATGGCCAGCCCGGACGAGGTGGACGACACCTATCTACAGGAGTTCTGGGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CAA 90 bp TTCTGGTGTTATCCGGTCCCTGCTCAGGGCACAAAGACCTCCTCGGTCCACGCTCTCTTCCCCGCCTCCTaGGTAGGCCACCACGCCGGG +
Preference number: 5 (lower is better)
Translates to: FWCYPVPAQGTKTSSVHALFPAS*VGHHAG
Trigger: CCCGGCGTGGTGGCCTACCAAGGAGGCGGGGAAGAG...AGCGTGGACCGAGGAGGTCTTTGTGCCCTGAGCAGGGACCGGATAACACCAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS GCA 90 bp CATAGAGATCATAGAGCGCGTCCCCGCTGTAGCTATCCCGGGGGATaGCCGCCTTCTTCCCGCTGCTCGAGCTGTCTTCCTCTGGGCCTG +
Preference number: 5 (lower is better)
Translates to: HRDHRARPRCSYPGG*PPSSRCSSCLPLGL
Trigger: CAGGCCCAGAGGAAGACAGCTCGAGCAGCGGGAAGAAGGCGGGCATCCCCCGGGATAGCTACAGCGGGGACGCGCTCTATGATCTCTATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS TCA 90 bp AGTGGGCTCGCGCCAGGCCACTGTCACCCGTATTCTAAATCAACCTaGGCCGCGCTCGCCGCCGCCGCTTCGGATTCCTTCTCTAGACTC +
Preference number: 5 (lower is better)
Translates to: SGLAPGHCHPYSKST*AALAAAASDSFSRL
Trigger: GAGTCTAGAGAAGGAATCCGAAGCGGCGGCGGCGAGCGCGGCTCAGGTTGATTTAGAATACGGGTGACAGTGGCCTGGCGCGAGCCCACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357816.2
CDS-3UTR CAA 90 bp TTCTGGTGTTATCCGGTCCCTGCTCAGGGCACAAAGACCTCCTCGGTCCACGCTGTCTCGGGCACCACCTaGGTTTCCAGCGCAGCTGCC +
Preference number: 5 (lower is better)
Translates to: FWCYPVPAQGTKTSSVHAVSGTT*VSSAAA
Trigger: GGCAGCTGCGCTGGAAACCAAGGTGGTGCCCGAGAC...AGCGTGGACCGAGGAGGTCTTTGTGCCCTGAGCAGGGACCGGATAACACCAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS GCA 90 bp GCTTTTGTTTGCCGCCGGCCTTGCTCGCGTCCACAGGCTCTCCCTTaGCGTTTTCCGAGCGCCCGTTCTTCTTCAGCAGCGAGAAGAAGC +
Preference number: 5 (lower is better)
Translates to: AFVCRRPCSRPQALP*RFPSARSSSAARRS
Trigger: GCTTCTTCTCGCTGCTGAAGAAGAACGGGCGCTCGGAAAACGGCAAGGGAGAGCCTGTGGACGCGAGCAAGGCCGGCGGCAAACAAAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS CCA 90 bp CAGGGAGGACGTCTCCTCGTTGTCCTTCCCTCCAGGAAGGGTTGCTaGACTTCCGTCCGGGTCAGCATAGAGATCATAGAGCGCGTCCCC +
Preference number: 5 (lower is better)
Translates to: QGGRLLVVLPSRKGC*TSVRVSIEIIERVP
Trigger: GGGGACGCGCTCTATGATCTCTATGCTGACCCGGACGGAAGTCCAGCAACCCTTCCTGGAGGGAAGGACAACGAGGAGACGTCCTCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CAA 90 bp TTCTGGTGTTATCCGGTCCCTGCTCAGGGCACAAAGACCTCCTCGGTCCACGCTTTGAGCCTCCTGCGCTaGACCGAGGACGCGTCCTTG +
Preference number: 5 (lower is better)
Translates to: FWCYPVPAQGTKTSSVHALSLLR*TEDASL
Trigger: CAAGGACGCGTCCTCGGTCAAGCGCAGGAGGCTCAA...AGCGTGGACCGAGGAGGTCTTTGTGCCCTGAGCAGGGACCGGATAACACCAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS GCA 90 bp AGCCGGCTTGCCTGGCCCGGGGACATGCTTGTCACAGCTGGGACCTaGCTCTTCCTCTTGGTCTGCAATAATATCTCCACAGCCTGCTGG +
Preference number: 5 (lower is better)
Translates to: SRLAWPGDMLVTAGT*LFLLVCNNISTACW
Trigger: CCAGCAGGCTGTGGAGATATTATTGCAGACCAAGAGGAAGAGGCAGGTCCCAGCTGTGACAAGCATGTCCCCGGGCCAGGCAAGCCGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357816.2
CDS CCA 90 bp CATCCACCTTGGCCTGGAAGACCTCACAACTTTTTGGCACTGTCGTaGCAGGCCGTTGCTCTGATGGTGGTCCCAGCCAAGCCCCGGTTG +
Preference number: 5 (lower is better)
Translates to: HPPWPGRPHNFLALS*QAVALMVVPAKPRL
Trigger: CAACCGGGGCTTGGCTGGGACCACCATCAGAGCAACGGCCTGCCACGACAGTGCCAAAAAGTTGTGAGGTCTTCCAGGCCAAGGTGGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CAA 90 bp TTCTGGTGTTATCCGGTCCCTGCTCAGGGCACAAAGACCTCCTCGGTCCACGCTGAGGACGTCTCCTCGTaGTCCTTCCCTCCAGGAAGG +
Preference number: 5 (lower is better)
Translates to: FWCYPVPAQGTKTSSVHAEDVSS*SFPPGR
Trigger: CCTTCCTGGAGGGAAGGACAACGAGGAGACGTCCTC...AGCGTGGACCGAGGAGGTCTTTGTGCCCTGAGCAGGGACCGGATAACACCAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CAA 90 bp TTCTGGTGTTATCCGGTCCCTGCTCAGGGCACAAAGACCTCCTCGGTCCACGCTTGGGGCCCATCCACCTaGGCCTGGAAGACCTCACAA +
Preference number: 5 (lower is better)
Translates to: FWCYPVPAQGTKTSSVHAWGPST*AWKTSQ
Trigger: TTGTGAGGTCTTCCAGGCCAAGGTGGATGGGCCCCA...AGCGTGGACCGAGGAGGTCTTTGTGCCCTGAGCAGGGACCGGATAACACCAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS TCA 90 bp AGTGGGCTCGCGCCAGGCCACTGTCACCCGTATTCTAAATCAACCTaGGCCGCGCTCGCCGCCGCCGCTGCAAAAGAAACACACATAAAA +
Preference number: 5 (lower is better)
Translates to: SGLAPGHCHPYSKST*AALAAAAAKETHIK
Trigger: TTTTATGTGTGTTTCTTTTGCAGCGGCGGCGGCGAGCGCGGCTCAGGTTGATTTAGAATACGGGTGACAGTGGCCTGGCGCGAGCCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515384.2
CDS GCA 90 bp AGCCGGCTTGCCTGGCCCGGGGACATGCTTGTCACAGCTGGGACCTaGCTCTTCCTCTTGGTCTGCAATAATATCTCCACAGCCTGTAAG +
Preference number: 5 (lower is better)
Translates to: SRLAWPGDMLVTAGT*LFLLVCNNISTACK
Trigger: CTTACAGGCTGTGGAGATATTATTGCAGACCAAGAGGAAGAGGCAGGTCCCAGCTGTGACAAGCATGTCCCCGGGCCAGGCAAGCCGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515384.2
CDS CCA 90 bp AACCCACTTCCATCCGACTTGGCTCGGCGCTGCATGGCGTTTTTGTaGCAGGAGCAGGCAACACAGCCGCGAGCTGATTGCAGAAATTCG +
Preference number: 5 (lower is better)
Translates to: NPLPSDLARRCMAFL*QEQATQPRADCRNS
Trigger: CGAATTTCTGCAATCAGCTCGCGGCTGTGTTGCCTGCTCCTGCCACAAAAACGCCATGCAGCGCCGAGCCAAGTCGGATGGAAGTGGGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515384.2
CDS-3UTR CAA 90 bp TTCTGGTGTTATCCGGTCCCTGCTCAGGGCACAAAGACCTCCTCGGTCCACGCTAGACCTCACAACTTTTaGGCACTGTCGTGGCAGGCC +
Preference number: 5 (lower is better)
Translates to: FWCYPVPAQGTKTSSVHARPHNF*ALSWQA
Trigger: GGCCTGCCACGACAGTGCCAAAAAGTTGTGAGGTCT...AGCGTGGACCGAGGAGGTCTTTGTGCCCTGAGCAGGGACCGGATAACACCAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CAA 90 bp GACTCTTACCCAAAACAAGGCAGAGCCATTCCTCTGGGACACCAGCACAATAGATTAGACAGAGCCGGCTaGCCTGGCCCGGGGACATGC +
Preference number: 5 (lower is better)
Translates to: DSYPKQGRAIPLGHQHNRLDRAG*PGPGTC
Trigger: GCATGTCCCCGGGCCAGGCAAGCCGGCTCTGTCTAA...TCTATTGTGCTGGTGTCCCAGAGGAATGGCTCTGCCTTGTTTTGGGTAAGAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CAA 90 bp GACTCTTACCCAAAACAAGGCAGAGCCATTCCTCTGGGACACCAGCACAATAGAACCGAGGACGCGTCCTaGGCCGCTTCCACACACCTG +
Preference number: 5 (lower is better)
Translates to: DSYPKQGRAIPLGHQHNRTEDAS*AASTHL
Trigger: CAGGTGTGTGGAAGCGGCCAAGGACGCGTCCTCGGT...TCTATTGTGCTGGTGTCCCAGAGGAATGGCTCTGCCTTGTTTTGGGTAAGAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS GCA 90 bp TTGGAAACCGGGATTTTTGTTCTGGGCATCTCACTCCTGGAGGGTTaGTGGTGCACCACGGGATGGCTAGATGGAAGGTTGGTCAGGTGC +
Preference number: 5 (lower is better)
Translates to: LETGIFVLGISLLEG*WCTTGWLDGRLVRC
Trigger: GCACCTGACCAACCTTCCATCTAGCCATCCCGTGGTGCACCAGCAACCCTCCAGGAGTGAGATGCCCAGAACAAAAATCCCGGTTTCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS CCA 90 bp GTTCTGGGCATCTCACTCCTGGAGGGTTGCTGGTGCACCACGGGATaGCTAGATGGAAGGTTGGTCAGGTGCTTGATGCTAATAGGGATC +
Preference number: 5 (lower is better)
Translates to: VLGISLLEGCWCTTG*LDGRLVRCLMLIGI
Trigger: GATCCCTATTAGCATCAAGCACCTGACCAACCTTCCATCTAGCCATCCCGTGGTGCACCAGCAACCCTCCAGGAGTGAGATGCCCAGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS CCA 90 bp TATAATACCCTAACCCACTTCCATCCGACTTGGCTCGGCGCTGCATaGCGTTTTTGTGGCAGGAGCAGGCAACACAGCCGCGAGCTGATT +
Preference number: 5 (lower is better)
Translates to: YNTLTHFHPTWLGAA*RFCGRSRQHSRELI
Trigger: AATCAGCTCGCGGCTGTGTTGCCTGCTCCTGCCACAAAAACGCCATGCAGCGCCGAGCCAAGTCGGATGGAAGTGGGTTAGGGTATTATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515384.2
CDS CCA 90 bp TCCCGCAAGGGCTTATATAATACCCTAACCCACTTCCATCCGACTTaGCTCGGCGCTGCATGGCGTTTTTGTGGCAGGAGCAGGCAACAC +
Preference number: 5 (lower is better)
Translates to: SRKGLYNTLTHFHPT*LGAAWRFCGRSRQH
Trigger: GTGTTGCCTGCTCCTGCCACAAAAACGCCATGCAGCGCCGAGCCAAGTCGGATGGAAGTGGGTTAGGGTATTATATAAGCCCTTGCGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515384.2
CDS-3UTR CAA 90 bp TTCTGGTGTTATCCGGTCCCTGCTCAGGGCACAAAGACCTCCTCGGTCCACGCTTGGCTAGATGGAAGGTaGGTCAGGTGCTTGATGCTA +
Preference number: 5 (lower is better)
Translates to: FWCYPVPAQGTKTSSVHAWLDGR*VRCLML
Trigger: TAGCATCAAGCACCTGACCAACCTTCCATCTAGCCA...AGCGTGGACCGAGGAGGTCTTTGTGCCCTGAGCAGGGACCGGATAACACCAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CAA 90 bp TTCTGGTGTTATCCGGTCCCTGCTCAGGGCACAAAGACCTCCTCGGTCCACGCTTGGAAACCGGGATTTTaGTTCTGGGCATCTCACTCC +
Preference number: 5 (lower is better)
Translates to: FWCYPVPAQGTKTSSVHAWKPGF*FWASHS
Trigger: GGAGTGAGATGCCCAGAACAAAAATCCCGGTTTCCA...AGCGTGGACCGAGGAGGTCTTTGTGCCCTGAGCAGGGACCGGATAACACCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CAA 90 bp TTCTGGTGTTATCCGGTCCCTGCTCAGGGCACAAAGACCTCCTCGGTCCACGCTGGAAGGAAACGTGTCTaGGAAGAGGAGATCTCCTCT +
Preference number: 5 (lower is better)
Translates to: FWCYPVPAQGTKTSSVHAGRKRV*EEEISS
Trigger: AGAGGAGATCTCCTCTTCCAAGACACGTTTCCTTCC...AGCGTGGACCGAGGAGGTCTTTGTGCCCTGAGCAGGGACCGGATAACACCAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CAA 90 bp GCTAATGGCAGGATAAACGCATCAACCACCATCTGTACTAAAGCAGAGTGTTTCCCGCAGCCCCCGCTTTaGTTTGCCGCCGGCCTTGCT +
Preference number: 5 (lower is better)
Translates to: ANGRINASTTICTKAECFPQPPL*FAAGLA
Trigger: AGCAAGGCCGGCGGCAAACAAAAGCGGGGGCTGCGG...GAAACACTCTGCTTTAGTACAGATGGTGGTTGATGCGTTTATCCTGCCATTAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CAA 90 bp TTAACAATGAAGGGGAGCAAAGCATACGTGAATGTACTGGAACAGGTCTCAGCACTGGGCGTCTCCTCCTaGACGCACTCCAGGCTGGCG +
Preference number: 5 (lower is better)
Translates to: LTMKGSKAYVNVLEQVSALGVSS*THSRLA
Trigger: CGCCAGCCTGGAGTGCGTCAAGGAGGAGACGCCCAG...TGCTGAGACCTGTTCCAGTACATTCACGTATGCTTTGCTCCCCTTCATTGTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CAA 90 bp GACTCTTACCCAAAACAAGGCAGAGCCATTCCTCTGGGACACCAGCACAATAGATCGATGGGAATCCGGTaGAGCCTCCTGCGCTTGACC +
Preference number: 5 (lower is better)
Translates to: DSYPKQGRAIPLGHQHNRSMGIR*SLLRLT
Trigger: GGTCAAGCGCAGGAGGCTCAACCGGATTCCCATCGA...TCTATTGTGCTGGTGTCCCAGAGGAATGGCTCTGCCTTGTTTTGGGTAAGAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS TCA 90 bp GCAGGCAGGAAGCATGTCTGCCTACATCCATGTCTTGTCCAGAGCTaGGCACACGCTAGGTCCATGCTGTGTGGCTGTCATTGTGGTTAT +
Preference number: 5 (lower is better)
Translates to: AGRKHVCLHPCLVQS*AHARSMLCGCHCGY
Trigger: ATAACCACAATGACAGCCACACAGCATGGACCTAGCGTGTGCTCAGCTCTGGACAAGACATGGATGTAGGCAGACATGCTTCCTGCCTGC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS GCA 90 bp GGTTGCTGGTGCACCACGGGATGGCTAGATGGAAGGTTGGTCAGGTaGTTGATGCTAATAGGGATCTTAGAGTCCTTCAGCAAGCTGCCT +
Preference number: 5 (lower is better)
Translates to: GCWCTTGWLDGRLVR*LMLIGILESFSKLP
Trigger: AGGCAGCTTGCTGAAGGACTCTAAGATCCCTATTAGCATCAAGCACCTGACCAACCTTCCATCTAGCCATCCCGTGGTGCACCAGCAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS CCA 90 bp GTGCTTGATGCTAATAGGGATCTTAGAGTCCTTCAGCAAGCTGCCTaGTGTTCGCAGTGGACAGGTGATGGTGCCTGGAGATACGGGCTT +
Preference number: 5 (lower is better)
Translates to: VLDANRDLRVLQQAA*CSQWTGDGAWRYGL
Trigger: AAGCCCGTATCTCCAGGCACCATCACCTGTCCACTGCGAACACCAGGCAGCTTGCTGAAGGACTCTAAGATCCCTATTAGCATCAAGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS CCA 90 bp CATCTCACTCCTGGAGGGTTGCTGGTGCACCACGGGATGGCTAGATaGAAGGTTGGTCAGGTGCTTGATGCTAATAGGGATCTTAGAGTC +
Preference number: 5 (lower is better)
Translates to: HLTPGGLLVHHGMAR*KVGQVLDANRDLRV
Trigger: GACTCTAAGATCCCTATTAGCATCAAGCACCTGACCAACCTTCCATCTAGCCATCCCGTGGTGCACCAGCAACCCTCCAGGAGTGAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CAA 90 bp GCTAATGGCAGGATAAACGCATCAACCACCATCTGTACTAAAGCAGAGTGTTTCTGTTTGCCGCCGGCCTaGCTCGCGTCCACAGGCTCT +
Preference number: 5 (lower is better)
Translates to: ANGRINASTTICTKAECFCLPPA*LASTGS
Trigger: AGAGCCTGTGGACGCGAGCAAGGCCGGCGGCAAACA...GAAACACTCTGCTTTAGTACAGATGGTGGTTGATGCGTTTATCCTGCCATTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CAA 90 bp CAAACACAGATAACAAGTTGGCAAAGATGTGGAGAAATTGGAACCCTTGTGCACAGCCCCCGCTTTTGTTaGCCGCCGGCCTTGCTCGCG +
Preference number: 5 (lower is better)
Translates to: QTQITSWQRCGEIGTLVHSPRFC*PPALLA
Trigger: CGCGAGCAAGGCCGGCGGCAAACAAAAGCGGGGGCT...GTGCACAAGGGTTCCAATTTCTCCACATCTTTGCCAACTTGTTATCTGTGTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CAA 90 bp GCTAATGGCAGGATAAACGCATCAACCACCATCTGTACTAAAGCAGAGTGTTTCCCACTTCCATCCGACTaGGCTCGGCGCTGCATGGCG +
Preference number: 5 (lower is better)
Translates to: ANGRINASTTICTKAECFPLPSD*ARRCMA
Trigger: CGCCATGCAGCGCCGAGCCAAGTCGGATGGAAGTGG...GAAACACTCTGCTTTAGTACAGATGGTGGTTGATGCGTTTATCCTGCCATTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515384.2
CDS-3UTR CAA 90 bp GCTAATGGCAGGATAAACGCATCAACCACCATCTGTACTAAAGCAGAGTGTTTCAAGAAGCTGTGCGACTaGGCCACCGAGCTGCTGGCG +
Preference number: 5 (lower is better)
Translates to: ANGRINASTTICTKAECFKKLCD*ATELLA
Trigger: CGCCAGCAGCTCGGTGGCCAAGTCGCACAGCTTCTT...GAAACACTCTGCTTTAGTACAGATGGTGGTTGATGCGTTTATCCTGCCATTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CAA 90 bp TTCCCATTACAGTACATAACAGAACATCAATGGTTTGGGGACCATCATCATGTCAGCCCCCGCTTTTGTTaGCCGCCGGCCTTGCTCGCG +
Preference number: 5 (lower is better)
Translates to: FPLQYITEHQWFGDHHHVSPRFC*PPALLA
Trigger: CGCGAGCAAGGCCGGCGGCAAACAAAAGCGGGGGCT...GACATGATGATGGTCCCCAAACCATTGATGTTCTGTTATGTACTGTAATGGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CAA 90 bp CAAACACAGATAACAAGTTGGCAAAGATGTGGAGAAATTGGAACCCTTGTGCACTTAGACAGAGCCGGCTaGCCTGGCCCGGGGACATGC +
Preference number: 5 (lower is better)
Translates to: QTQITSWQRCGEIGTLVHLDRAG*PGPGTC
Trigger: GCATGTCCCCGGGCCAGGCAAGCCGGCTCTGTCTAA...GTGCACAAGGGTTCCAATTTCTCCACATCTTTGCCAACTTGTTATCTGTGTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CAA 90 bp GCTAATGGCAGGATAAACGCATCAACCACCATCTGTACTAAAGCAGAGTGTTTCTTGAGCCTCCTGCGCTaGACCGAGGACGCGTCCTTG +
Preference number: 5 (lower is better)
Translates to: ANGRINASTTICTKAECFLSLLR*TEDASL
Trigger: CAAGGACGCGTCCTCGGTCAAGCGCAGGAGGCTCAA...GAAACACTCTGCTTTAGTACAGATGGTGGTTGATGCGTTTATCCTGCCATTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CAA 90 bp TTAACAATGAAGGGGAGCAAAGCATACGTGAATGTACTGGAACAGGTCTCAGCATCCCTCCAGGAAGGGTaGCTGGACTTCCGTCCGGGT +
Preference number: 5 (lower is better)
Translates to: LTMKGSKAYVNVLEQVSASLQEG*LDFRPG
Trigger: ACCCGGACGGAAGTCCAGCAACCCTTCCTGGAGGGA...TGCTGAGACCTGTTCCAGTACATTCACGTATGCTTTGCTCCCCTTCATTGTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CAA 90 bp GACTCTTACCCAAAACAAGGCAGAGCCATTCCTCTGGGACACCAGCACAATAGACAACTGTTCTTTTCCTaGCTCTGCCTGGAGGAGGGG +
Preference number: 5 (lower is better)
Translates to: DSYPKQGRAIPLGHQHNRQLFFS*LCLEEG
Trigger: CCCCTCCTCCAGGCAGAGCAAGGAAAAGAACAGTTG...TCTATTGTGCTGGTGTCCCAGAGGAATGGCTCTGCCTTGTTTTGGGTAAGAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CAA 90 bp TTCCCATTACAGTACATAACAGAACATCAATGGTTTGGGGACCATCATCATGTCTGTTTGCCGCCGGCCTaGCTCGCGTCCACAGGCTCT +
Preference number: 5 (lower is better)
Translates to: FPLQYITEHQWFGDHHHVCLPPA*LASTGS
Trigger: AGAGCCTGTGGACGCGAGCAAGGCCGGCGGCAAACA...GACATGATGATGGTCCCCAAACCATTGATGTTCTGTTATGTACTGTAATGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CAA 90 bp TTCCCATTACAGTACATAACAGAACATCAATGGTTTGGGGACCATCATCATGTCTCCGCCTTGGCCCGCTaGTCTTTCCTGTGCCAGCGC +
Preference number: 5 (lower is better)
Translates to: FPLQYITEHQWFGDHHHVSALAR*SFLCQR
Trigger: GCGCTGGCACAGGAAAGACAAGCGGGCCAAGGCGGA...GACATGATGATGGTCCCCAAACCATTGATGTTCTGTTATGTACTGTAATGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CAA 90 bp CAGTGTATGTGTAATATAGACATTCAAGTCAGGCTGTCTTTGTGCAGAGCTATTTCCGCGGCCTCCGCCTaGGCCCGCTTGTCTTTCCTG +
Preference number: 5 (lower is better)
Translates to: QCMCNIDIQVRLSLCRAISAASA*ARLSFL
Trigger: CAGGAAAGACAAGCGGGCCAAGGCGGAGGCCGCGGA...AATAGCTCTGCACAAAGACAGCCTGACTTGAATGTCTATATTACACATACACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CAA 90 bp CAAACACAGATAACAAGTTGGCAAAGATGTGGAGAAATTGGAACCCTTGTGCACACACACCTGGTGTCTTaGGGGGTCTCGGGCACCACC +
Preference number: 5 (lower is better)
Translates to: QTQITSWQRCGEIGTLVHTHLVS*GVSGTT
Trigger: GGTGGTGCCCGAGACCCCCAAAGACACCAGGTGTGT...GTGCACAAGGGTTCCAATTTCTCCACATCTTTGCCAACTTGTTATCTGTGTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CAA 90 bp TTTAAAATGGGGAATGGCCTACTTTCTGCTACTGGCTCAATTTGCTTTCCTTTGACCGAGGACGCGTCCTaGGCCGCTTCCACACACCTG +
Preference number: 5 (lower is better)
Translates to: FKMGNGLLSATGSICFPLTEDAS*AASTHL
Trigger: CAGGTGTGTGGAAGCGGCCAAGGACGCGTCCTCGGT...CAAAGGAAAGCAAATTGAGCCAGTAGCAGAAAGTAGGCCATTCCCCATTTTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CAA 90 bp CAGTGTATGTGTAATATAGACATTCAAGTCAGGCTGTCTTTGTGCAGAGCTATTCCAGCCAAGCCCCGGTaGCTGACTCTGCGGACCAGC +
Preference number: 5 (lower is better)
Translates to: QCMCNIDIQVRLSLCRAIPAKPR*LTLRTS
Trigger: GCTGGTCCGCAGAGTCAGCAACCGGGGCTTGGCTGG...AATAGCTCTGCACAAAGACAGCCTGACTTGAATGTCTATATTACACATACACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CAA 90 bp TTCTGGTGTTATCCGGTCCCTGCTCAGGGCACAAAGACCTCCTCGGTCCACGCTTATGGTTGGAAAAAGTaGAGAATCTACTCTTCCTGC +
Preference number: 5 (lower is better)
Translates to: FWCYPVPAQGTKTSSVHAYGWKK*RIYSSC
Trigger: GCAGGAAGAGTAGATTCTCAACTTTTTCCAACCATA...AGCGTGGACCGAGGAGGTCTTTGTGCCCTGAGCAGGGACCGGATAACACCAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CAA 90 bp CAGTGTATGTGTAATATAGACATTCAAGTCAGGCTGTCTTTGTGCAGAGCTATTTCCACAGGCTCTCCCTaGCCGTTTTCCGAGCGCCCG +
Preference number: 5 (lower is better)
Translates to: QCMCNIDIQVRLSLCRAISTGSP*PFSERP
Trigger: CGGGCGCTCGGAAAACGGCAAGGGAGAGCCTGTGGA...AATAGCTCTGCACAAAGACAGCCTGACTTGAATGTCTATATTACACATACACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CAA 90 bp TTTGACTTTTTCCTGTCTAATTTGGGCAGCCTTTCAACTAAAGGAAGTCAATCACCGCAGCCCCCGCTTTaGTTTGCCGCCGGCCTTGCT +
Preference number: 5 (lower is better)
Translates to: FDFFLSNLGSLSTKGSQSPQPPL*FAAGLA
Trigger: AGCAAGGCCGGCGGCAAACAAAAGCGGGGGCTGCGG...TGATTGACTTCCTTTAGTTGAAAGGCTGCCCAAATTAGACAGGAAAAAGTCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CAA 90 bp ACATTCAAGTCAGGCTGTCTTTGTGCAGAGCTATTAAACCAACCGATAAATTTTTCCGCGGCCTCCGCCTaGGCCCGCTTGTCTTTCCTG +
Preference number: 5 (lower is better)
Translates to: TFKSGCLCAELLNQPINFSAASA*ARLSFL
Trigger: CAGGAAAGACAAGCGGGCCAAGGCGGAGGCCGCGGA...AAAATTTATCGGTTGGTTTAATAGCTCTGCACAAAGACAGCCTGACTTGAATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CAA 90 bp TGGCACAAGAAAGCAACTATGATCCCTTTTCTATGGTTGGAAAAAGTTGAGAATCTGGGCGTCTCCTCCTaGACGCACTCCAGGCTGGCG +
Preference number: 5 (lower is better)
Translates to: WHKKATMIPFLWLEKVENLGVSS*THSRLA
Trigger: CGCCAGCCTGGAGTGCGTCAAGGAGGAGACGCCCAG...ATTCTCAACTTTTTCCAACCATAGAAAAGGGATCATAGTTGCTTTCTTGTGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CAA 90 bp TTCCCATTACAGTACATAACAGAACATCAATGGTTTGGGGACCATCATCATGTCTCCCTCCAGGAAGGGTaGCTGGACTTCCGTCCGGGT +
Preference number: 5 (lower is better)
Translates to: FPLQYITEHQWFGDHHHVSLQEG*LDFRPG
Trigger: ACCCGGACGGAAGTCCAGCAACCCTTCCTGGAGGGA...GACATGATGATGGTCCCCAAACCATTGATGTTCTGTTATGTACTGTAATGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CAA 90 bp GACTCTTACCCAAAACAAGGCAGAGCCATTCCTCTGGGACACCAGCACAATAGACTGCGGACCAGCACTTaGGAAACCGGGATTTTTGTT +
Preference number: 5 (lower is better)
Translates to: DSYPKQGRAIPLGHQHNRLRTST*ETGIFV
Trigger: AACAAAAATCCCGGTTTCCAAAGTGCTGGTCCGCAG...TCTATTGTGCTGGTGTCCCAGAGGAATGGCTCTGCCTTGTTTTGGGTAAGAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CAA 90 bp CAAACACAGATAACAAGTTGGCAAAGATGTGGAGAAATTGGAACCCTTGTGCACTGGGGCCCATCCACCTaGGCCTGGAAGACCTCACAA +
Preference number: 5 (lower is better)
Translates to: QTQITSWQRCGEIGTLVHWGPST*AWKTSQ
Trigger: TTGTGAGGTCTTCCAGGCCAAGGTGGATGGGCCCCA...GTGCACAAGGGTTCCAATTTCTCCACATCTTTGCCAACTTGTTATCTGTGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CAA 90 bp ACATTCAAGTCAGGCTGTCTTTGTGCAGAGCTATTAAACCAACCGATAAATTTTTCCACAGGCTCTCCCTaGCCGTTTTCCGAGCGCCCG +
Preference number: 5 (lower is better)
Translates to: TFKSGCLCAELLNQPINFSTGSP*PFSERP
Trigger: CGGGCGCTCGGAAAACGGCAAGGGAGAGCCTGTGGA...AAAATTTATCGGTTGGTTTAATAGCTCTGCACAAAGACAGCCTGACTTGAATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CAA 90 bp TGGCACAAGAAAGCAACTATGATCCCTTTTCTATGGTTGGAAAAAGTTGAGAATGTCTCGGGCACCACCTaGGTTTCCAGCGCAGCTGCC +
Preference number: 5 (lower is better)
Translates to: WHKKATMIPFLWLEKVENVSGTT*VSSAAA
Trigger: GGCAGCTGCGCTGGAAACCAAGGTGGTGCCCGAGAC...ATTCTCAACTTTTTCCAACCATAGAAAAGGGATCATAGTTGCTTTCTTGTGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CAA 90 bp TTCCCATTACAGTACATAACAGAACATCAATGGTTTGGGGACCATCATCATGTCTCCTTCTCCGGGTGCTaGGGCTCCTCCTTAGGATGG +
Preference number: 5 (lower is better)
Translates to: FPLQYITEHQWFGDHHHVSFSGC*GSSLGW
Trigger: CCATCCTAAGGAGGAGCCCAAGCACCCGGAGAAGGA...GACATGATGATGGTCCCCAAACCATTGATGTTCTGTTATGTACTGTAATGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CAA 90 bp ATGTCATTTACATATGTGCAGTTTCACGTGAATATGCATAATCTTCCTGGTATGCCAGCCAAGCCCCGGTaGCTGACTCTGCGGACCAGC +
Preference number: 5 (lower is better)
Translates to: MSFTYVQFHVNMHNLPGMPAKPR*LTLRTS
Trigger: GCTGGTCCGCAGAGTCAGCAACCGGGGCTTGGCTGG...CATACCAGGAAGATTATGCATATTCACGTGAAACTGCACATATGTAAATGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS CCA 90 bp AAACTTACTTTAGTGGTTTCCAGGGAAAAGTTGTATTCCTTGGCATaGGGCCCATCCACCTTGGCCTGGAAGACCTCACAACTTTTTGGC +
Preference number: 5 (lower is better)
Translates to: KLTLVVSREKLYSLA*GPSTLAWKTSQLFG
Trigger: GCCAAAAAGTTGTGAGGTCTTCCAGGCCAAGGTGGATGGGCCCCATGCCAAGGAATACAACTTTTCCCTGGAAACCACTAAAGTAAGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CAA 90 bp ACATTCAAGTCAGGCTGTCTTTGTGCAGAGCTATTAAACCAACCGATAAATTTTACACACCTGGTGTCTTaGGGGGTCTCGGGCACCACC +
Preference number: 5 (lower is better)
Translates to: TFKSGCLCAELLNQPINFTHLVS*GVSGTT
Trigger: GGTGGTGCCCGAGACCCCCAAAGACACCAGGTGTGT...AAAATTTATCGGTTGGTTTAATAGCTCTGCACAAAGACAGCCTGACTTGAATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CAA 90 bp TTCCCATTACAGTACATAACAGAACATCAATGGTTTGGGGACCATCATCATGTCCGCTGCATGGCGTTTTaGTGGCAGGAGCAGGCAACA +
Preference number: 5 (lower is better)
Translates to: FPLQYITEHQWFGDHHHVRCMAF*WQEQAT
Trigger: TGTTGCCTGCTCCTGCCACAAAAACGCCATGCAGCG...GACATGATGATGGTCCCCAAACCATTGATGTTCTGTTATGTACTGTAATGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515384.2
CDS-3UTR CAA 90 bp TTTGACTTTTTCCTGTCTAATTTGGGCAGCCTTTCAACTAAAGGAAGTCAATCATCGATGGGAATCCGGTaGAGCCTCCTGCGCTTGACC +
Preference number: 5 (lower is better)
Translates to: FDFFLSNLGSLSTKGSQSSMGIR*SLLRLT
Trigger: GGTCAAGCGCAGGAGGCTCAACCGGATTCCCATCGA...TGATTGACTTCCTTTAGTTGAAAGGCTGCCCAAATTAGACAGGAAAAAGTCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CAA 90 bp TTTGACTTTTTCCTGTCTAATTTGGGCAGCCTTTCAACTAAAGGAAGTCAATCATCCTTCTCCGGGTGCTaGGGCTCCTCCTTAGGATGG +
Preference number: 5 (lower is better)
Translates to: FDFFLSNLGSLSTKGSQSSFSGC*GSSLGW
Trigger: CCATCCTAAGGAGGAGCCCAAGCACCCGGAGAAGGA...TGATTGACTTCCTTTAGTTGAAAGGCTGCCCAAATTAGACAGGAAAAAGTCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CAA 90 bp GACTCTTACCCAAAACAAGGCAGAGCCATTCCTCTGGGACACCAGCACAATAGATGCTACTGGCTCAATTaGCTTTCCTTTGATGTCCAT +
Preference number: 5 (lower is better)
Translates to: DSYPKQGRAIPLGHQHNRCYWLN*LSFDVH
Trigger: ATGGACATCAAAGGAAAGCAAATTGAGCCAGTAGCA...TCTATTGTGCTGGTGTCCCAGAGGAATGGCTCTGCCTTGTTTTGGGTAAGAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CAA 90 bp GACTCTTACCCAAAACAAGGCAGAGCCATTCCTCTGGGACACCAGCACAATAGAGCCCAAATCCTTTATTaGATTGGTGTGGGTGCAATT +
Preference number: 5 (lower is better)
Translates to: DSYPKQGRAIPLGHQHNRAQILY*IGVGAI
Trigger: AATTGCACCCACACCAATCAAATAAAGGATTTGGGC...TCTATTGTGCTGGTGTCCCAGAGGAATGGCTCTGCCTTGTTTTGGGTAAGAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CAA 90 bp CAAACACAGATAACAAGTTGGCAAAGATGTGGAGAAATTGGAACCCTTGTGCACTGGCTAGATGGAAGGTaGGTCAGGTGCTTGATGCTA +
Preference number: 5 (lower is better)
Translates to: QTQITSWQRCGEIGTLVHWLDGR*VRCLML
Trigger: TAGCATCAAGCACCTGACCAACCTTCCATCTAGCCA...GTGCACAAGGGTTCCAATTTCTCCACATCTTTGCCAACTTGTTATCTGTGTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CAA 90 bp TTCCCATTACAGTACATAACAGAACATCAATGGTTTGGGGACCATCATCATGTCGAAAAGTTGTATTCCTaGGCATGGGGCCCATCCACC +
Preference number: 5 (lower is better)
Translates to: FPLQYITEHQWFGDHHHVEKLYS*AWGPST
Trigger: GGTGGATGGGCCCCATGCCAAGGAATACAACTTTTC...GACATGATGATGGTCCCCAAACCATTGATGTTCTGTTATGTACTGTAATGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CAA 90 bp TTTAAAATGGGGAATGGCCTACTTTCTGCTACTGGCTCAATTTGCTTTCCTTTGTCTCAGGGACTTATCTaGAGAGGAGAAACCCCCGTG +
Preference number: 5 (lower is better)
Translates to: FKMGNGLLSATGSICFPLSQGLI*RGETPV
Trigger: CACGGGGGTTTCTCCTCTCAAGATAAGTCCCTGAGA...CAAAGGAAAGCAAATTGAGCCAGTAGCAGAAAGTAGGCCATTCCCCATTTTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CAA 90 bp CAGTGTATGTGTAATATAGACATTCAAGTCAGGCTGTCTTTGTGCAGAGCTATTCAACTGTTCTTTTCCTaGCTCTGCCTGGAGGAGGGG +
Preference number: 5 (lower is better)
Translates to: QCMCNIDIQVRLSLCRAIQLFFS*LCLEEG
Trigger: CCCCTCCTCCAGGCAGAGCAAGGAAAAGAACAGTTG...AATAGCTCTGCACAAAGACAGCCTGACTTGAATGTCTATATTACACATACACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CAA 90 bp TGGCACAAGAAAGCAACTATGATCCCTTTTCTATGGTTGGAAAAAGTTGAGAATGCCTACATCCATGTCTaGTCCAGAGCTGAGCACACG +
Preference number: 5 (lower is better)
Translates to: WHKKATMIPFLWLEKVENAYIHV*SRAEHT
Trigger: CGTGTGCTCAGCTCTGGACAAGACATGGATGTAGGC...ATTCTCAACTTTTTCCAACCATAGAAAAGGGATCATAGTTGCTTTCTTGTGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CAA 90 bp ACATTCAAGTCAGGCTGTCTTTGTGCAGAGCTATTAAACCAACCGATAAATTTTGCCTACATCCATGTCTaGTCCAGAGCTGAGCACACG +
Preference number: 5 (lower is better)
Translates to: TFKSGCLCAELLNQPINFAYIHV*SRAEHT
Trigger: CGTGTGCTCAGCTCTGGACAAGACATGGATGTAGGC...AAAATTTATCGGTTGGTTTAATAGCTCTGCACAAAGACAGCCTGACTTGAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CAA 90 bp TTCCCATTACAGTACATAACAGAACATCAATGGTTTGGGGACCATCATCATGTCCTGCGGACCAGCACTTaGGAAACCGGGATTTTTGTT +
Preference number: 5 (lower is better)
Translates to: FPLQYITEHQWFGDHHHVLRTST*ETGIFV
Trigger: AACAAAAATCCCGGTTTCCAAAGTGCTGGTCCGCAG...GACATGATGATGGTCCCCAAACCATTGATGTTCTGTTATGTACTGTAATGGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CAA 90 bp ACATTCAAGTCAGGCTGTCTTTGTGCAGAGCTATTAAACCAACCGATAAATTTTAGACCTCACAACTTTTaGGCACTGTCGTGGCAGGCC +
Preference number: 5 (lower is better)
Translates to: TFKSGCLCAELLNQPINFRPHNF*ALSWQA
Trigger: GGCCTGCCACGACAGTGCCAAAAAGTTGTGAGGTCT...AAAATTTATCGGTTGGTTTAATAGCTCTGCACAAAGACAGCCTGACTTGAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CAA 90 bp GCTAATGGCAGGATAAACGCATCAACCACCATCTGTACTAAAGCAGAGTGTTTCCAGAACATCAATGGTTaGGGGACCATCATCATGTCT +
Preference number: 5 (lower is better)
Translates to: ANGRINASTTICTKAECFQNING*GTIIMS
Trigger: AGACATGATGATGGTCCCCAAACCATTGATGTTCTG...GAAACACTCTGCTTTAGTACAGATGGTGGTTGATGCGTTTATCCTGCCATTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CAA 90 bp GCTAATGGCAGGATAAACGCATCAACCACCATCTGTACTAAAGCAGAGTGTTTCCAAGTCAGGCTGTCTTaGTGCAGAGCTATTAAACCA +
Preference number: 5 (lower is better)
Translates to: ANGRINASTTICTKAECFQVRLS*CRAIKP
Trigger: TGGTTTAATAGCTCTGCACAAAGACAGCCTGACTTG...GAAACACTCTGCTTTAGTACAGATGGTGGTTGATGCGTTTATCCTGCCATTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CAA 90 bp TTAACAATGAAGGGGAGCAAAGCATACGTGAATGTACTGGAACAGGTCTCAGCACCCGATTTCCTCTTCTaGAATAATTTGAAGGCAGCT +
Preference number: 5 (lower is better)
Translates to: LTMKGSKAYVNVLEQVSAPDFLF*NNLKAA
Trigger: AGCTGCCTTCAAATTATTCAAGAAGAGGAAATCGGG...TGCTGAGACCTGTTCCAGTACATTCACGTATGCTTTGCTCCCCTTCATTGTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CAA 90 bp TTCCCATTACAGTACATAACAGAACATCAATGGTTTGGGGACCATCATCATGTCACCTGCCTCTTCCTCTaGGTCTGCAATAATATCTCC +
Preference number: 5 (lower is better)
Translates to: FPLQYITEHQWFGDHHHVTCLFL*VCNNIS
Trigger: GGAGATATTATTGCAGACCAAGAGGAAGAGGCAGGT...GACATGATGATGGTCCCCAAACCATTGATGTTCTGTTATGTACTGTAATGGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CAA 90 bp TTAACAATGAAGGGGAGCAAAGCATACGTGAATGTACTGGAACAGGTCTCAGCAGCCCAAATCCTTTATTaGATTGGTGTGGGTGCAATT +
Preference number: 5 (lower is better)
Translates to: LTMKGSKAYVNVLEQVSAAQILY*IGVGAI
Trigger: AATTGCACCCACACCAATCAAATAAAGGATTTGGGC...TGCTGAGACCTGTTCCAGTACATTCACGTATGCTTTGCTCCCCTTCATTGTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CAA 90 bp CAGTGTATGTGTAATATAGACATTCAAGTCAGGCTGTCTTTGTGCAGAGCTATTTGTAATCCCAACACTTaGGAGGTAGAGGTGGGCAGA +
Preference number: 5 (lower is better)
Translates to: QCMCNIDIQVRLSLCRAICNPNT*EVEVGR
Trigger: TCTGCCCACCTCTACCTCCAAAGTGTTGGGATTACA...AATAGCTCTGCACAAAGACAGCCTGACTTGAATGTCTATATTACACATACACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CAA 90 bp GCTAATGGCAGGATAAACGCATCAACCACCATCTGTACTAAAGCAGAGTGTTTCAAAGATGTGGAGAAATaGGAACCCTTGTGCACCATT +
Preference number: 5 (lower is better)
Translates to: ANGRINASTTICTKAECFKDVEK*EPLCTI
Trigger: AATGGTGCACAAGGGTTCCAATTTCTCCACATCTTT...GAAACACTCTGCTTTAGTACAGATGGTGGTTGATGCGTTTATCCTGCCATTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CAA 90 bp TTTAAAATGGGGAATGGCCTACTTTCTGCTACTGGCTCAATTTGCTTTCCTTTGAGGTTGGTCAGGTGCTaGATGCTAATAGGGATCTTA +
Preference number: 5 (lower is better)
Translates to: FKMGNGLLSATGSICFPLRLVRC*MLIGIL
Trigger: TAAGATCCCTATTAGCATCAAGCACCTGACCAACCT...CAAAGGAAAGCAAATTGAGCCAGTAGCAGAAAGTAGGCCATTCCCCATTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CAA 90 bp TTTGACTTTTTCCTGTCTAATTTGGGCAGCCTTTCAACTAAAGGAAGTCAATCATGTAATCCCAACACTTaGGAGGTAGAGGTGGGCAGA +
Preference number: 5 (lower is better)
Translates to: FDFFLSNLGSLSTKGSQSCNPNT*EVEVGR
Trigger: TCTGCCCACCTCTACCTCCAAAGTGTTGGGATTACA...TGATTGACTTCCTTTAGTTGAAAGGCTGCCCAAATTAGACAGGAAAAAGTCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CAA 90 bp TTTGACTTTTTCCTGTCTAATTTGGGCAGCCTTTCAACTAAAGGAAGTCAATCAACCTGCCTCTTCCTCTaGGTCTGCAATAATATCTCC +
Preference number: 5 (lower is better)
Translates to: FDFFLSNLGSLSTKGSQSTCLFL*VCNNIS
Trigger: GGAGATATTATTGCAGACCAAGAGGAAGAGGCAGGT...TGATTGACTTCCTTTAGTTGAAAGGCTGCCCAAATTAGACAGGAAAAAGTCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CAA 90 bp ATGTCATTTACATATGTGCAGTTTCACGTGAATATGCATAATCTTCCTGGTATGTGGAAACCGGGATTTTaGTTCTGGGCATCTCACTCC +
Preference number: 5 (lower is better)
Translates to: MSFTYVQFHVNMHNLPGMWKPGF*FWASHS
Trigger: GGAGTGAGATGCCCAGAACAAAAATCCCGGTTTCCA...CATACCAGGAAGATTATGCATATTCACGTGAAACTGCACATATGTAAATGACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CAA 90 bp TTTAAAATGGGGAATGGCCTACTTTCTGCTACTGGCTCAATTTGCTTTCCTTTGTGCTACTGGCTCAATTaGCTTTCCTTTGATGTCCAT +
Preference number: 5 (lower is better)
Translates to: FKMGNGLLSATGSICFPLCYWLN*LSFDVH
Trigger: ATGGACATCAAAGGAAAGCAAATTGAGCCAGTAGCA...CAAAGGAAAGCAAATTGAGCCAGTAGCAGAAAGTAGGCCATTCCCCATTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CAA 90 bp TTAACAATGAAGGGGAGCAAAGCATACGTGAATGTACTGGAACAGGTCTCAGCATGCTTATATGAATTCTaGGTAGTGTGTTCAGAATGC +
Preference number: 5 (lower is better)
Translates to: LTMKGSKAYVNVLEQVSACLYEF*VVCSEC
Trigger: GCATTCTGAACACACTACCAAGAATTCATATAAGCA...TGCTGAGACCTGTTCCAGTACATTCACGTATGCTTTGCTCCCCTTCATTGTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CAA 90 bp TTAACAATGAAGGGGAGCAAAGCATACGTGAATGTACTGGAACAGGTCTCAGCAGAAGATGAATGTATTTaGAGCCTAAATAGTACCAGC +
Preference number: 5 (lower is better)
Translates to: LTMKGSKAYVNVLEQVSAEDECI*SLNSTS
Trigger: GCTGGTACTATTTAGGCTCAAAATACATTCATCTTC...TGCTGAGACCTGTTCCAGTACATTCACGTATGCTTTGCTCCCCTTCATTGTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CAA 90 bp TTTAAAATGGGGAATGGCCTACTTTCTGCTACTGGCTCAATTTGCTTTCCTTTGGAGAAATTGGAACCCTaGTGCACCATTGGTAAGTAT +
Preference number: 5 (lower is better)
Translates to: FKMGNGLLSATGSICFPLEKLEP*CTIGKY
Trigger: ATACTTACCAATGGTGCACAAGGGTTCCAATTTCTC...CAAAGGAAAGCAAATTGAGCCAGTAGCAGAAAGTAGGCCATTCCCCATTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CAA 90 bp TTCCCATTACAGTACATAACAGAACATCAATGGTTTGGGGACCATCATCATGTCGAGAAATTGGAACCCTaGTGCACCATTGGTAAGTAT +
Preference number: 5 (lower is better)
Translates to: FPLQYITEHQWFGDHHHVEKLEP*CTIGKY
Trigger: ATACTTACCAATGGTGCACAAGGGTTCCAATTTCTC...GACATGATGATGGTCCCCAAACCATTGATGTTCTGTTATGTACTGTAATGGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CAA 90 bp TTTGACTTTTTCCTGTCTAATTTGGGCAGCCTTTCAACTAAAGGAAGTCAATCAAGGTTGGTCAGGTGCTaGATGCTAATAGGGATCTTA +
Preference number: 5 (lower is better)
Translates to: FDFFLSNLGSLSTKGSQSRLVRC*MLIGIL
Trigger: TAAGATCCCTATTAGCATCAAGCACCTGACCAACCT...TGATTGACTTCCTTTAGTTGAAAGGCTGCCCAAATTAGACAGGAAAAAGTCAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CAA 90 bp CAAACACAGATAACAAGTTGGCAAAGATGTGGAGAAATTGGAACCCTTGTGCACAGAAGCTCTGGTCTTTaGATTAAATACACTGAAGTG +
Preference number: 5 (lower is better)
Translates to: QTQITSWQRCGEIGTLVHRSSGL*IKYTEV
Trigger: CACTTCAGTGTATTTAATCAAAAGACCAGAGCTTCT...GTGCACAAGGGTTCCAATTTCTCCACATCTTTGCCAACTTGTTATCTGTGTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CAA 90 bp TTTGACTTTTTCCTGTCTAATTTGGGCAGCCTTTCAACTAAAGGAAGTCAATCACAAGTCAGGCTGTCTTaGTGCAGAGCTATTAAACCA +
Preference number: 5 (lower is better)
Translates to: FDFFLSNLGSLSTKGSQSQVRLS*CRAIKP
Trigger: TGGTTTAATAGCTCTGCACAAAGACAGCCTGACTTG...TGATTGACTTCCTTTAGTTGAAAGGCTGCCCAAATTAGACAGGAAAAAGTCAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CAA 90 bp CAGTGTATGTGTAATATAGACATTCAAGTCAGGCTGTCTTTGTGCAGAGCTATTGACTCTTACTTAGGTTaGGCTAAGTTCTGTTTTCTG +
Preference number: 5 (lower is better)
Translates to: QCMCNIDIQVRLSLCRAIDSYLG*AKFCFL
Trigger: CAGAAAACAGAACTTAGCCAAACCTAAGTAAGAGTC...AATAGCTCTGCACAAAGACAGCCTGACTTGAATGTCTATATTACACATACACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CAA 90 bp TTCCCATTACAGTACATAACAGAACATCAATGGTTTGGGGACCATCATCATGTCAGAAGCTCTGGTCTTTaGATTAAATACACTGAAGTG +
Preference number: 5 (lower is better)
Translates to: FPLQYITEHQWFGDHHHVRSSGL*IKYTEV
Trigger: CACTTCAGTGTATTTAATCAAAAGACCAGAGCTTCT...GACATGATGATGGTCCCCAAACCATTGATGTTCTGTTATGTACTGTAATGGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CAA 90 bp TTTAAAATGGGGAATGGCCTACTTTCTGCTACTGGCTCAATTTGCTTTCCTTTGGAAGATGAATGTATTTaGAGCCTAAATAGTACCAGC +
Preference number: 5 (lower is better)
Translates to: FKMGNGLLSATGSICFPLEDECI*SLNSTS
Trigger: GCTGGTACTATTTAGGCTCAAAATACATTCATCTTC...CAAAGGAAAGCAAATTGAGCCAGTAGCAGAAAGTAGGCCATTCCCCATTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CAA 90 bp TTCCCATTACAGTACATAACAGAACATCAATGGTTTGGGGACCATCATCATGTCTTTTTCCTGTCTAATTaGGGCAGCCTTTCAACTAAA +
Preference number: 5 (lower is better)
Translates to: FPLQYITEHQWFGDHHHVFFLSN*GSLSTK
Trigger: TTTAGTTGAAAGGCTGCCCAAATTAGACAGGAAAAA...GACATGATGATGGTCCCCAAACCATTGATGTTCTGTTATGTACTGTAATGGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CAA 90 bp TTTAAAATGGGGAATGGCCTACTTTCTGCTACTGGCTCAATTTGCTTTCCTTTGTTTTTCCTGTCTAATTaGGGCAGCCTTTCAACTAAA +
Preference number: 5 (lower is better)
Translates to: FKMGNGLLSATGSICFPLFFLSN*GSLSTK
Trigger: TTTAGTTGAAAGGCTGCCCAAATTAGACAGGAAAAA...CAAAGGAAAGCAAATTGAGCCAGTAGCAGAAAGTAGGCCATTCCCCATTTTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CAA 90 bp TTTAAAATGGGGAATGGCCTACTTTCTGCTACTGGCTCAATTTGCTTTCCTTTGTTTAACTGCAAATACTaGAAGACTACCTCTGAGATG +
Preference number: 5 (lower is better)
Translates to: FKMGNGLLSATGSICFPLFNCKY*KTTSEM
Trigger: CATCTCAGAGGTAGTCTTCAAGTATTTGCAGTTAAA...CAAAGGAAAGCAAATTGAGCCAGTAGCAGAAAGTAGGCCATTCCCCATTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CAA 90 bp TTTGACTTTTTCCTGTCTAATTTGGGCAGCCTTTCAACTAAAGGAAGTCAATCAAAAGATGTGGAGAAATaGGAACCCTTGTGCACCATT +
Preference number: 5 (lower is better)
Translates to: FDFFLSNLGSLSTKGSQSKDVEK*EPLCTI
Trigger: AATGGTGCACAAGGGTTCCAATTTCTCCACATCTTT...TGATTGACTTCCTTTAGTTGAAAGGCTGCCCAAATTAGACAGGAAAAAGTCAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CAA 90 bp ATGTCATTTACATATGTGCAGTTTCACGTGAATATGCATAATCTTCCTGGTATGCCCGATTTCCTCTTCTaGAATAATTTGAAGGCAGCT +
Preference number: 5 (lower is better)
Translates to: MSFTYVQFHVNMHNLPGMPDFLF*NNLKAA
Trigger: AGCTGCCTTCAAATTATTCAAGAAGAGGAAATCGGG...CATACCAGGAAGATTATGCATATTCACGTGAAACTGCACATATGTAAATGACAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CAA 90 bp CAGTGTATGTGTAATATAGACATTCAAGTCAGGCTGTCTTTGTGCAGAGCTATTTGCTTATATGAATTCTaGGTAGTGTGTTCAGAATGC +
Preference number: 5 (lower is better)
Translates to: QCMCNIDIQVRLSLCRAICLYEF*VVCSEC
Trigger: GCATTCTGAACACACTACCAAGAATTCATATAAGCA...AATAGCTCTGCACAAAGACAGCCTGACTTGAATGTCTATATTACACATACACTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CAA 90 bp TGGCACAAGAAAGCAACTATGATCCCTTTTCTATGGTTGGAAAAAGTTGAGAATTATGGTTGGAAAAAGTaGAGAATCTACTCTTCCTGC +
Preference number: 5 (lower is better)
Translates to: WHKKATMIPFLWLEKVENYGWKK*RIYSSC
Trigger: GCAGGAAGAGTAGATTCTCAACTTTTTCCAACCATA...ATTCTCAACTTTTTCCAACCATAGAAAAGGGATCATAGTTGCTTTCTTGTGCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS-3UTR CAA 90 bp ACATTCAAGTCAGGCTGTCTTTGTGCAGAGCTATTAAACCAACCGATAAATTTTTTTAACTGCAAATACTaGAAGACTACCTCTGAGATG +
Preference number: 5 (lower is better)
Translates to: TFKSGCLCAELLNQPINFFNCKY*KTTSEM
Trigger: CATCTCAGAGGTAGTCTTCAAGTATTTGCAGTTAAA...AAAATTTATCGGTTGGTTTAATAGCTCTGCACAAAGACAGCCTGACTTGAATGT
37% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS GCA 72 bp TCCGCGGCCTCCGCCTTGGCCCGCTTGTCTTTCCTGTaGCAGCGCATGCCGCTGAACAGCCCCCGCAGCCCC +
Preference number: 6 (lower is better)
Translates to: SAASALARLSFL*QRMPLNSPRSP
Trigger: GGGGCTGCGGGGGCTGTTCAGCGGCATGCGCTGGCACAGGAAAGACAAGCGGGCCAAGGCGGAGGCCGCGGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS GCA 72 bp GGGGGTCTCGGGCACCACCTTGGTTTCCAGCGCAGCTaGCACCTTAGCCGCGCCCTCCTGGGGCTCGGGTCC +
Preference number: 6 (lower is better)
Translates to: GGLGHHLGFQRS*HLSRALLGLGS
Trigger: GGACCCGAGCCCCAGGAGGGCGCGGCTAAGGTGGCAGCTGCGCTGGAAACCAAGGTGGTGCCCGAGACCCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS CAA 90 bp TGGCTGGGCTCCTCCGGCTCGCGCGCGGCTCTGGGCGTCTCCTCCTaGACGCACTCCAGGCTGGCGGTGAGCGAGCCGGGTAGGATCAAG +
Preference number: 6 (lower is better)
Translates to: WLGSSGSRAALGVSS*THSRLAVSEPGRIK
Trigger: CTTGATCCTACCCGGCTCGCTCACCGCCAGCCTGGAGTGCGTCAAGGAGGAGACGCCCAGAGCCGCGCGCGAGCCGGAGGAGCCCAGCCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS GCA 72 bp CGTTTCGGCGGCACAGTCACAATGCAAGTCCATGTCTaGCGCGAGGGTCCCGGTCCCGGCCCCGGCCTCCGC +
Preference number: 6 (lower is better)
Translates to: RFGGTVTMQVHV*REGPGPGPGLR
Trigger: GCGGAGGCCGGGGCCGGGACCGGGACCCTCGCGGCAGACATGGACTTGCATTGTGACTGTGCCGCCGAAACG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS GCA 72 bp GGCTCGGCGGCCGGCGTTTCGGCGGCACAGTCACAATaGAAGTCCATGTCTGCCGCGAGGGTCCCGGTCCCG +
Preference number: 6 (lower is better)
Translates to: GSAAGVSAAQSQ*KSMSAARVPVP
Trigger: CGGGACCGGGACCCTCGCGGCAGACATGGACTTGCATTGTGACTGTGCCGCCGAAACGCCGGCCGCCGAGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS CAA 72 bp GCGCATGCCGCTGAACAGCCCCCGCAGCCCCCGCTTTaGTTTGCCGCCGGCCTTGCTCGCGTCCACAGGCTC +
Preference number: 6 (lower is better)
Translates to: AHAAEQPPQPPL*FAAGLARVHRL
Trigger: GAGCCTGTGGACGCGAGCAAGGCCGGCGGCAAACAAAAGCGGGGGCTGCGGGGGCTGTTCAGCGGCATGCGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS CAA 90 bp CCTGTGCCAGCGCATGCCGCTGAACAGCCCCCGCAGCCCCCGCTTTaGTTTGCCGCCGGCCTTGCTCGCGTCCACAGGCTCTCCCTTGCC +
Preference number: 6 (lower is better)
Translates to: PVPAHAAEQPPQPPL*FAAGLARVHRLSLA
Trigger: GGCAAGGGAGAGCCTGTGGACGCGAGCAAGGCCGGCGGCAAACAAAAGCGGGGGCTGCGGGGGCTGTTCAGCGGCATGCGCTGGCACAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS GCA 72 bp GCCACCTTAGCCGCGCCCTCCTGGGGCTCGGGTCCCTaGTCCTCGGTCTGGGAGAGCATGTCCCAGAACTCC +
Preference number: 6 (lower is better)
Translates to: ATLAAPSWGSGP*SSVWESMSQNS
Trigger: GGAGTTCTGGGACATGCTCTCCCAGACCGAGGAGCAGGGACCCGAGCCCCAGGAGGGCGCGGCTAAGGTGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS CAA 90 bp GCCGCTTCCACACACCTGGTGTCTTTGGGGGTCTCGGGCACCACCTaGGTTTCCAGCGCAGCTGCCACCTTAGCCGCGCCCTCCTGGGGC +
Preference number: 6 (lower is better)
Translates to: AASTHLVSLGVSGTT*VSSAAATLAAPSWG
Trigger: GCCCCAGGAGGGCGCGGCTAAGGTGGCAGCTGCGCTGGAAACCAAGGTGGTGCCCGAGACCCCCAAAGACACCAGGTGTGTGGAAGCGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS GCA 72 bp CCAGCACCAGCACCTCGGCAAGTCCGTCGTGGGTCCTaGTCCTCACCAGCCCCGTCGGACCCGAGCTTTTCC +
Preference number: 6 (lower is better)
Translates to: PAPAPRQVRRGS*SSPAPSDPSFS
Trigger: GGAAAAGCTCGGGTCCGACGGGGCTGGTGAGGAGCAGGACCCACGACGGACTTGCCGAGGTGCTGGTGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS GCA 72 bp TGCCGCCGGCCTTGCTCGCGTCCACAGGCTCTCCCTTaGCGTTTTCCGAGCGCCCGTTCTTCTTCAGCAGCG +
Preference number: 6 (lower is better)
Translates to: CRRPCSRPQALP*RFPSARSSSAA
Trigger: CGCTGCTGAAGAAGAACGGGCGCTCGGAAAACGGCAAGGGAGAGCCTGTGGACGCGAGCAAGGCCGGCGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS GCA 72 bp TGTAGCTATCCCGGGGGATGCCCGCCTTCTTCCCGCTaGTCGAGCTGTCTTCCTCTGGGCCTGGCGTGGTGG +
Preference number: 6 (lower is better)
Translates to: CSYPGGCPPSSR*SSCLPLGLAWW
Trigger: CCACCACGCCAGGCCCAGAGGAAGACAGCTCGAGCAGCGGGAAGAAGGCGGGCATCCCCCGGGATAGCTACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS CCA 72 bp CTGGCGTGGTGGAGTCCCAGTAGCCCTCGTCGCTGTTaGGGACGCCTTCCTGCTGCTCCTTCTCCGGGTGCT +
Preference number: 6 (lower is better)
Translates to: LAWWSPSSPRRC*GRLPAAPSPGA
Trigger: AGCACCCGGAGAAGGAGCAGCAGGAAGGCGTCCCCAACAGCGACGAGGGCTACTGGGACTCCACCACGCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS CAA 90 bp GGGTGCTTGGGCTCCTCCTTAGGATGGGGCTCGATGGGAATCCGGTaGAGCCTCCTGCGCTTGACCGAGGACGCGTCCTTGGCCGCTTCC +
Preference number: 6 (lower is better)
Translates to: GCLGSSLGWGSMGIR*SLLRLTEDASLAAS
Trigger: GGAAGCGGCCAAGGACGCGTCCTCGGTCAAGCGCAGGAGGCTCAACCGGATTCCCATCGAGCCCCATCCTAAGGAGGAGCCCAAGCACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS GCA 72 bp CATAGAGCGCGTCCCCGCTGTAGCTATCCCGGGGGATaGCCGCCTTCTTCCCGCTGCTCGAGCTGTCTTCCT +
Preference number: 6 (lower is better)
Translates to: HRARPRCSYPGG*PPSSRCSSCLP
Trigger: AGGAAGACAGCTCGAGCAGCGGGAAGAAGGCGGGCATCCCCCGGGATAGCTACAGCGGGGACGCGCTCTATG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS CAA 72 bp TTGCCGCCGGCCTTGCTCGCGTCCACAGGCTCTCCCTaGCCGTTTTCCGAGCGCCCGTTCTTCTTCAGCAGC +
Preference number: 6 (lower is better)
Translates to: LPPALLASTGSP*PFSERPFFFSS
Trigger: GCTGCTGAAGAAGAACGGGCGCTCGGAAAACGGCAAGGGAGAGCCTGTGGACGCGAGCAAGGCCGGCGGCAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS CAA 72 bp ACACACCTGGTGTCTTTGGGGGTCTCGGGCACCACCTaGGTTTCCAGCGCAGCTGCCACCTTAGCCGCGCCC +
Preference number: 6 (lower is better)
Translates to: THLVSLGVSGTT*VSSAAATLAAP
Trigger: GGGCGCGGCTAAGGTGGCAGCTGCGCTGGAAACCAAGGTGGTGCCCGAGACCCCCAAAGACACCAGGTGTGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS CAA 72 bp CGGTTGAGCCTCCTGCGCTTGACCGAGGACGCGTCCTaGGCCGCTTCCACACACCTGGTGTCTTTGGGGGTC +
Preference number: 6 (lower is better)
Translates to: RLSLLRLTEDAS*AASTHLVSLGV
Trigger: GACCCCCAAAGACACCAGGTGTGTGGAAGCGGCCAAGGACGCGTCCTCGGTCAAGCGCAGGAGGCTCAACCG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS CAA 72 bp TGGGGCTCGATGGGAATCCGGTTGAGCCTCCTGCGCTaGACCGAGGACGCGTCCTTGGCCGCTTCCACACAC +
Preference number: 6 (lower is better)
Translates to: WGSMGIRLSLLR*TEDASLAASTH
Trigger: GTGTGTGGAAGCGGCCAAGGACGCGTCCTCGGTCAAGCGCAGGAGGCTCAACCGGATTCCCATCGAGCCCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS CAA 90 bp ATGGGAATCCGGTTGAGCCTCCTGCGCTTGACCGAGGACGCGTCCTaGGCCGCTTCCACACACCTGGTGTCTTTGGGGGTCTCGGGCACC +
Preference number: 6 (lower is better)
Translates to: MGIRLSLLRLTEDAS*AASTHLVSLGVSGT
Trigger: GGTGCCCGAGACCCCCAAAGACACCAGGTGTGTGGAAGCGGCCAAGGACGCGTCCTCGGTCAAGCGCAGGAGGCTCAACCGGATTCCCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS TCA 72 bp GCGCCAGGCCACTGTCACCCGTATTCTAAATCAACCTaGGCCGCGCTCGCCGCCGCCGCTTCGGATTCCTTC +
Preference number: 6 (lower is better)
Translates to: APGHCHPYSKST*AALAAAASDSF
Trigger: GAAGGAATCCGAAGCGGCGGCGGCGAGCGCGGCTCAGGTTGATTTAGAATACGGGTGACAGTGGCCTGGCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357816.2
CDS GCA 72 bp CTGTTGGGGACGCCTTCCTGCTGCTCCTTCTCCGGGTaGTTGGGCTCCTCCTTAGGATGGGGCTCGATGGGA +
Preference number: 6 (lower is better)
Translates to: LLGTPSCCSFSG*LGSSLGWGSMG
Trigger: TCCCATCGAGCCCCATCCTAAGGAGGAGCCCAAGCACCCGGAGAAGGAGCAGCAGGAAGGCGTCCCCAACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS CCA 72 bp ACGCGTCCTTGGCCGCTTCCACACACCTGGTGTCTTTaGGGGTCTCGGGCACCACCTTGGTTTCCAGCGCAG +
Preference number: 6 (lower is better)
Translates to: TRPWPLPHTWCL*GSRAPPWFPAQ
Trigger: CTGCGCTGGAAACCAAGGTGGTGCCCGAGACCCCCAAAGACACCAGGTGTGTGGAAGCGGCCAAGGACGCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS CCA 72 bp TGCTCCTTCTCCGGGTGCTTGGGCTCCTCCTTAGGATaGGGCTCGATGGGAATCCGGTTGAGCCTCCTGCGC +
Preference number: 6 (lower is better)
Translates to: CSFSGCLGSSLG*GSMGIRLSLLR
Trigger: GCGCAGGAGGCTCAACCGGATTCCCATCGAGCCCCATCCTAAGGAGGAGCCCAAGCACCCGGAGAAGGAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS CCA 72 bp CTTCTTCCCGCTGCTCGAGCTGTCTTCCTCTGGGCCTaGCGTGGTGGAGTCCCAGTAGCCCTCGTCGCTGTT +
Preference number: 6 (lower is better)
Translates to: LLPAARAVFLWA*RGGVPVALVAV
Trigger: AACAGCGACGAGGGCTACTGGGACTCCACCACGCCAGGCCCAGAGGAAGACAGCTCGAGCAGCGGGAAGAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS CAA 72 bp GACGCGTCCTTGGCCGCTTCCACACACCTGGTGTCTTaGGGGGTCTCGGGCACCACCTTGGTTTCCAGCGCA +
Preference number: 6 (lower is better)
Translates to: DASLAASTHLVS*GVSGTTLVSSA
Trigger: TGCGCTGGAAACCAAGGTGGTGCCCGAGACCCCCAAAGACACCAGGTGTGTGGAAGCGGCCAAGGACGCGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS CAA 72 bp GGCTCCTCCTTAGGATGGGGCTCGATGGGAATCCGGTaGAGCCTCCTGCGCTTGACCGAGGACGCGTCCTTG +
Preference number: 6 (lower is better)
Translates to: GSSLGWGSMGIR*SLLRLTEDASL
Trigger: CAAGGACGCGTCCTCGGTCAAGCGCAGGAGGCTCAACCGGATTCCCATCGAGCCCCATCCTAAGGAGGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS CAA 72 bp GCCGTTGCTCTGATGGTGGTCCCAGCCAAGCCCCGGTaGCTGACTCTGCGGACCAGCACTTTGGAAACCGGG +
Preference number: 6 (lower is better)
Translates to: AVALMVVPAKPR*LTLRTSTLETG
Trigger: CCCGGTTTCCAAAGTGCTGGTCCGCAGAGTCAGCAACCGGGGCTTGGCTGGGACCACCATCAGAGCAACGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS CAA 90 bp TCGTCGCTGTTGGGGACGCCTTCCTGCTGCTCCTTCTCCGGGTGCTaGGGCTCCTCCTTAGGATGGGGCTCGATGGGAATCCGGTTGAGC +
Preference number: 6 (lower is better)
Translates to: SSLLGTPSCCSFSGC*GSSLGWGSMGIRLS
Trigger: GCTCAACCGGATTCCCATCGAGCCCCATCCTAAGGAGGAGCCCAAGCACCCGGAGAAGGAGCAGCAGGAAGGCGTCCCCAACAGCGACGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS CAA 90 bp TCCTTAGGATGGGGCTCGATGGGAATCCGGTTGAGCCTCCTGCGCTaGACCGAGGACGCGTCCTTGGCCGCTTCCACACACCTGGTGTCT +
Preference number: 6 (lower is better)
Translates to: SLGWGSMGIRLSLLR*TEDASLAASTHLVS
Trigger: AGACACCAGGTGTGTGGAAGCGGCCAAGGACGCGTCCTCGGTCAAGCGCAGGAGGCTCAACCGGATTCCCATCGAGCCCCATCCTAAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS CCA 72 bp ACTCCTGTAGATAGGTGTCGTCCACCTCGTCCGGGCTaGCCATCTCTTCCCCGCCTCCTTGGTAGGCCACCA +
Preference number: 6 (lower is better)
Translates to: TPVDRCRPPRPG*PSLPRLLGRPP
Trigger: TGGTGGCCTACCAAGGAGGCGGGGAAGAGATGGCCAGCCCGGACGAGGTGGACGACACCTATCTACAGGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS CCA 72 bp CCATCCGACTTGGCTCGGCGCTGCATGGCGTTTTTGTaGCAGGAGCAGGCAACACAGCCGCGAGCTGATTGC +
Preference number: 6 (lower is better)
Translates to: PSDLARRCMAFL*QEQATQPRADC
Trigger: GCAATCAGCTCGCGGCTGTGTTGCCTGCTCCTGCCACAAAAACGCCATGCAGCGCCGAGCCAAGTCGGATGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515384.2
CDS CAA 90 bp CGCTTTTGTTTGCCGCCGGCCTTGCTCGCGTCCACAGGCTCTCCCTaGCCGTTTTCCGAGCGCCCGTTCTTCTTCAGCAGCGAGAAGAAG +
Preference number: 6 (lower is better)
Translates to: RFCLPPALLASTGSP*PFSERPFFFSSEKK
Trigger: CTTCTTCTCGCTGCTGAAGAAGAACGGGCGCTCGGAAAACGGCAAGGGAGAGCCTGTGGACGCGAGCAAGGCCGGCGGCAAACAAAAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS CAA 90 bp CCTGGAGATACGGGCTTTAACCGGGACAGGGAGGACGTCTCCTCGTaGTCCTTCCCTCCAGGAAGGGTTGCTGGACTTCCGTCCGGGTCA +
Preference number: 6 (lower is better)
Translates to: PGDTGFNRDREDVSS*SFPPGRVAGLPSGS
Trigger: TGACCCGGACGGAAGTCCAGCAACCCTTCCTGGAGGGAAGGACAACGAGGAGACGTCCTCCCTGTCCCGGTTAAAGCCCGTATCTCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS CAA 90 bp TGGCATGGGGCCCATCCACCTTGGCCTGGAAGACCTCACAACTTTTaGGCACTGTCGTGGCAGGCCGTTGCTCTGATGGTGGTCCCAGCC +
Preference number: 6 (lower is better)
Translates to: WHGAHPPWPGRPHNF*ALSWQAVALMVVPA
Trigger: GGCTGGGACCACCATCAGAGCAACGGCCTGCCACGACAGTGCCAAAAAGTTGTGAGGTCTTCCAGGCCAAGGTGGATGGGCCCCATGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS TCA 72 bp GCGCCAGGCCACTGTCACCCGTATTCTAAATCAACCTaGGCCGCGCTCGCCGCCGCCGCTGCAAAAGAAACA +
Preference number: 6 (lower is better)
Translates to: APGHCHPYSKST*AALAAAAAKET
Trigger: TGTTTCTTTTGCAGCGGCGGCGGCGAGCGCGGCTCAGGTTGATTTAGAATACGGGTGACAGTGGCCTGGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515384.2
CDS CCA 72 bp CTAACCCACTTCCATCCGACTTGGCTCGGCGCTGCATaGCGTTTTTGTGGCAGGAGCAGGCAACACAGCCGC +
Preference number: 6 (lower is better)
Translates to: LTHFHPTWLGAA*RFCGRSRQHSR
Trigger: GCGGCTGTGTTGCCTGCTCCTGCCACAAAAACGCCATGCAGCGCCGAGCCAAGTCGGATGGAAGTGGGTTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515384.2
CDS CAA 72 bp TTAGACAGAGCCGGCTTGCCTGGCCCGGGGACATGCTaGTCACAGCTGGGACCTGCCTCTTCCTCTTGGTCT +
Preference number: 6 (lower is better)
Translates to: LDRAGLPGPGTC*SQLGPASSSWS
Trigger: AGACCAAGAGGAAGAGGCAGGTCCCAGCTGTGACAAGCATGTCCCCGGGCCAGGCAAGCCGGCTCTGTCTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS CAA 72 bp ACGGGCTTTAACCGGGACAGGGAGGACGTCTCCTCGTaGTCCTTCCCTCCAGGAAGGGTTGCTGGACTTCCG +
Preference number: 6 (lower is better)
Translates to: TGFNRDREDVSS*SFPPGRVAGLP
Trigger: CGGAAGTCCAGCAACCCTTCCTGGAGGGAAGGACAACGAGGAGACGTCCTCCCTGTCCCGGTTAAAGCCCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS CAA 72 bp CTTCCATCCGACTTGGCTCGGCGCTGCATGGCGTTTTaGTGGCAGGAGCAGGCAACACAGCCGCGAGCTGAT +
Preference number: 6 (lower is better)
Translates to: LPSDLARRCMAF*WQEQATQPRAD
Trigger: ATCAGCTCGCGGCTGTGTTGCCTGCTCCTGCCACAAAAACGCCATGCAGCGCCGAGCCAAGTCGGATGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515384.2
CDS CAA 90 bp GGGACAGGGAGGACGTCTCCTCGTTGTCCTTCCCTCCAGGAAGGGTaGCTGGACTTCCGTCCGGGTCAGCATAGAGATCATAGAGCGCGT +
Preference number: 6 (lower is better)
Translates to: GTGRTSPRCPSLQEG*LDFRPGQHRDHRAR
Trigger: ACGCGCTCTATGATCTCTATGCTGACCCGGACGGAAGTCCAGCAACCCTTCCTGGAGGGAAGGACAACGAGGAGACGTCCTCCCTGTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS GCA 72 bp TTTTTAGACAGAGCCGGCTTGCCTGGCCCGGGGACATaGTTGTCACAGCTGGGACCTGCCTCTTCCTCTTGG +
Preference number: 6 (lower is better)
Translates to: FLDRAGLPGPGT*LSQLGPASSSW
Trigger: CCAAGAGGAAGAGGCAGGTCCCAGCTGTGACAAGCATGTCCCCGGGCCAGGCAAGCCGGCTCTGTCTAAAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS CAA 90 bp GTGGTCCCAGCCAAGCCCCGGTTGCTGACTCTGCGGACCAGCACTTaGGAAACCGGGATTTTTGTTCTGGGCATCTCACTCCTGGAGGGT +
Preference number: 6 (lower is better)
Translates to: VVPAKPRLLTLRTST*ETGIFVLGISLLEG
Trigger: ACCCTCCAGGAGTGAGATGCCCAGAACAAAAATCCCGGTTTCCAAAGTGCTGGTCCGCAGAGTCAGCAACCGGGGCTTGGCTGGGACCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS CAA 90 bp TCGTGGCAGGCCGTTGCTCTGATGGTGGTCCCAGCCAAGCCCCGGTaGCTGACTCTGCGGACCAGCACTTTGGAAACCGGGATTTTTGTT +
Preference number: 6 (lower is better)
Translates to: SWQAVALMVVPAKPR*LTLRTSTLETGIFV
Trigger: AACAAAAATCCCGGTTTCCAAAGTGCTGGTCCGCAGAGTCAGCAACCGGGGCTTGGCTGGGACCACCATCAGAGCAACGGCCTGCCACGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS CAA 90 bp CCTAACCCACTTCCATCCGACTTGGCTCGGCGCTGCATGGCGTTTTaGTGGCAGGAGCAGGCAACACAGCCGCGAGCTGATTGCAGAAAT +
Preference number: 6 (lower is better)
Translates to: PNPLPSDLARRCMAF*WQEQATQPRADCRN
Trigger: ATTTCTGCAATCAGCTCGCGGCTGTGTTGCCTGCTCCTGCCACAAAAACGCCATGCAGCGCCGAGCCAAGTCGGATGGAAGTGGGTTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515384.2
CDS GCA 72 bp TACCCTAACCCACTTCCATCCGACTTGGCTCGGCGCTaGATGGCGTTTTTGTGGCAGGAGCAGGCAACACAG +
Preference number: 6 (lower is better)
Translates to: YPNPLPSDLARR*MAFLWQEQATQ
Trigger: CTGTGTTGCCTGCTCCTGCCACAAAAACGCCATGCAGCGCCGAGCCAAGTCGGATGGAAGTGGGTTAGGGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515384.2
CDS CCA 72 bp TGGCCTGGAAGACCTCACAACTTTTTGGCACTGTCGTaGCAGGCCGTTGCTCTGATGGTGGTCCCAGCCAAG +
Preference number: 6 (lower is better)
Translates to: WPGRPHNFLALS*QAVALMVVPAK
Trigger: CTTGGCTGGGACCACCATCAGAGCAACGGCCTGCCACGACAGTGCCAAAAAGTTGTGAGGTCTTCCAGGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS CAA 72 bp GCCCATCCACCTTGGCCTGGAAGACCTCACAACTTTTaGGCACTGTCGTGGCAGGCCGTTGCTCTGATGGTG +
Preference number: 6 (lower is better)
Translates to: AHPPWPGRPHNF*ALSWQAVALMV
Trigger: CACCATCAGAGCAACGGCCTGCCACGACAGTGCCAAAAAGTTGTGAGGTCTTCCAGGCCAAGGTGGATGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS GCA 72 bp CTTGTCACAGCTGGGACCTGCCTCTTCCTCTTGGTCTaGAATAATATCTCCACAGCCTGCTGGGTCTCGCGG +
Preference number: 6 (lower is better)
Translates to: LVTAGTCLFLLV*NNISTACWVSR
Trigger: CCGCGAGACCCAGCAGGCTGTGGAGATATTATTGCAGACCAAGAGGAAGAGGCAGGTCCCAGCTGTGACAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357816.2
CDS CCA 72 bp CGTCTCCTCGTTGTCCTTCCCTCCAGGAAGGGTTGCTaGACTTCCGTCCGGGTCAGCATAGAGATCATAGAG +
Preference number: 6 (lower is better)
Translates to: RLLVVLPSRKGC*TSVRVSIEIIE
Trigger: CTCTATGATCTCTATGCTGACCCGGACGGAAGTCCAGCAACCCTTCCTGGAGGGAAGGACAACGAGGAGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS CAA 72 bp AGGACGTCTCCTCGTTGTCCTTCCCTCCAGGAAGGGTaGCTGGACTTCCGTCCGGGTCAGCATAGAGATCAT +
Preference number: 6 (lower is better)
Translates to: RTSPRCPSLQEG*LDFRPGQHRDH
Trigger: ATGATCTCTATGCTGACCCGGACGGAAGTCCAGCAACCCTTCCTGGAGGGAAGGACAACGAGGAGACGTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS CAA 72 bp GCCAAGCCCCGGTTGCTGACTCTGCGGACCAGCACTTaGGAAACCGGGATTTTTGTTCTGGGCATCTCACTC +
Preference number: 6 (lower is better)
Translates to: AKPRLLTLRTST*ETGIFVLGISL
Trigger: GAGTGAGATGCCCAGAACAAAAATCCCGGTTTCCAAAGTGCTGGTCCGCAGAGTCAGCAACCGGGGCTTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS CAA 90 bp GGGTTCTTTTTAGACAGAGCCGGCTTGCCTGGCCCGGGGACATGCTaGTCACAGCTGGGACCTGCCTCTTCCTCTTGGTCTGCAATAATA +
Preference number: 6 (lower is better)
Translates to: GFFLDRAGLPGPGTC*SQLGPASSSWSAII
Trigger: TATTATTGCAGACCAAGAGGAAGAGGCAGGTCCCAGCTGTGACAAGCATGTCCCCGGGCCAGGCAAGCCGGCTCTGTCTAAAAAGAACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS CCA 72 bp CCTGGAGGGTTGCTGGTGCACCACGGGATGGCTAGATaGAAGGTTGGTCAGGTGCTTGATGCTAATAGGGAT +
Preference number: 6 (lower is better)
Translates to: PGGLLVHHGMAR*KVGQVLDANRD
Trigger: ATCCCTATTAGCATCAAGCACCTGACCAACCTTCCATCTAGCCATCCCGTGGTGCACCAGCAACCCTCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS CCA 72 bp ATCTCACTCCTGGAGGGTTGCTGGTGCACCACGGGATaGCTAGATGGAAGGTTGGTCAGGTGCTTGATGCTA +
Preference number: 6 (lower is better)
Translates to: ISLLEGCWCTTG*LDGRLVRCLML
Trigger: TAGCATCAAGCACCTGACCAACCTTCCATCTAGCCATCCCGTGGTGCACCAGCAACCCTCCAGGAGTGAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS CCA 72 bp TGCGGACCAGCACTTTGGAAACCGGGATTTTTGTTCTaGGCATCTCACTCCTGGAGGGTTGCTGGTGCACCA +
Preference number: 6 (lower is better)
Translates to: CGPALWKPGFLF*ASHSWRVAGAP
Trigger: TGGTGCACCAGCAACCCTCCAGGAGTGAGATGCCCAGAACAAAAATCCCGGTTTCCAAAGTGCTGGTCCGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS CAA 90 bp CTCCTGGAGGGTTGCTGGTGCACCACGGGATGGCTAGATGGAAGGTaGGTCAGGTGCTTGATGCTAATAGGGATCTTAGAGTCCTTCAGC +
Preference number: 6 (lower is better)
Translates to: LLEGCWCTTGWLDGR*VRCLMLIGILESFS
Trigger: GCTGAAGGACTCTAAGATCCCTATTAGCATCAAGCACCTGACCAACCTTCCATCTAGCCATCCCGTGGTGCACCAGCAACCCTCCAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS CAA 90 bp TTTGGAAACCGGGATTTTTGTTCTGGGCATCTCACTCCTGGAGGGTaGCTGGTGCACCACGGGATGGCTAGATGGAAGGTTGGTCAGGTG +
Preference number: 6 (lower is better)
Translates to: FGNRDFCSGHLTPGG*LVHHGMARWKVGQV
Trigger: CACCTGACCAACCTTCCATCTAGCCATCCCGTGGTGCACCAGCAACCCTCCAGGAGTGAGATGCCCAGAACAAAAATCCCGGTTTCCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS CCA 72 bp GCTAATAGGGATCTTAGAGTCCTTCAGCAAGCTGCCTaGTGTTCGCAGTGGACAGGTGATGGTGCCTGGAGA +
Preference number: 6 (lower is better)
Translates to: ANRDLRVLQQAA*CSQWTGDGAWR
Trigger: TCTCCAGGCACCATCACCTGTCCACTGCGAACACCAGGCAGCTTGCTGAAGGACTCTAAGATCCCTATTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS CCA 72 bp TTGTATTCCTTGGCATGGGGCCCATCCACCTTGGCCTaGAAGACCTCACAACTTTTTGGCACTGTCGTGGCA +
Preference number: 6 (lower is better)
Translates to: LYSLAWGPSTLA*KTSQLFGTVVA
Trigger: TGCCACGACAGTGCCAAAAAGTTGTGAGGTCTTCCAGGCCAAGGTGGATGGGCCCCATGCCAAGGAATACAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS CCA 72 bp GGCTTATATAATACCCTAACCCACTTCCATCCGACTTaGCTCGGCGCTGCATGGCGTTTTTGTGGCAGGAGC +
Preference number: 6 (lower is better)
Translates to: GLYNTLTHFHPT*LGAAWRFCGRS
Trigger: GCTCCTGCCACAAAAACGCCATGCAGCGCCGAGCCAAGTCGGATGGAAGTGGGTTAGGGTATTATATAAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515384.2
CDS CAA 72 bp GACATGCTTGTCACAGCTGGGACCTGCCTCTTCCTCTaGGTCTGCAATAATATCTCCACAGCCTGCTGGGTC +
Preference number: 6 (lower is better)
Translates to: DMLVTAGTCLFL*VCNNISTACWV
Trigger: GACCCAGCAGGCTGTGGAGATATTATTGCAGACCAAGAGGAAGAGGCAGGTCCCAGCTGTGACAAGCATGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357816.2
CDS CAA 90 bp TGCTGGTGCACCACGGGATGGCTAGATGGAAGGTTGGTCAGGTGCTaGATGCTAATAGGGATCTTAGAGTCCTTCAGCAAGCTGCCTGGT +
Preference number: 6 (lower is better)
Translates to: CWCTTGWLDGRLVRC*MLIGILESFSKLPG
Trigger: ACCAGGCAGCTTGCTGAAGGACTCTAAGATCCCTATTAGCATCAAGCACCTGACCAACCTTCCATCTAGCCATCCCGTGGTGCACCAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS TCA 72 bp AAGCATGTCTGCCTACATCCATGTCTTGTCCAGAGCTaGGCACACGCTAGGTCCATGCTGTGTGGCTGTCAT +
Preference number: 6 (lower is better)
Translates to: KHVCLHPCLVQS*AHARSMLCGCH
Trigger: ATGACAGCCACACAGCATGGACCTAGCGTGTGCTCAGCTCTGGACAAGACATGGATGTAGGCAGACATGCTT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS CAA 90 bp AAAATGCTGGGCATGGTGCCACCCGATTTCCTCTTCTTGAATAATTaGAAGGCAGCTTTATTAATCTTCCCCGACGGCGGCTCGGCGGCC +
Preference number: 6 (lower is better)
Translates to: KMLGMVPPDFLFLNN*KAALLIFPDGGSAA
Trigger: GGCCGCCGAGCCGCCGTCGGGGAAGATTAATAAAGCTGCCTTCAAATTATTCAAGAAGAGGAAATCGGGTGGCACCATGCCCAGCATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS GCA 72 bp TGCACCACGGGATGGCTAGATGGAAGGTTGGTCAGGTaGTTGATGCTAATAGGGATCTTAGAGTCCTTCAGC +
Preference number: 6 (lower is better)
Translates to: CTTGWLDGRLVR*LMLIGILESFS
Trigger: GCTGAAGGACTCTAAGATCCCTATTAGCATCAAGCACCTGACCAACCTTCCATCTAGCCATCCCGTGGTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS CCA 72 bp TTAGTGGTTTCCAGGGAAAAGTTGTATTCCTTGGCATaGGGCCCATCCACCTTGGCCTGGAAGACCTCACAA +
Preference number: 6 (lower is better)
Translates to: LVVSREKLYSLA*GPSTLAWKTSQ
Trigger: TTGTGAGGTCTTCCAGGCCAAGGTGGATGGGCCCCATGCCAAGGAATACAACTTTTCCCTGGAAACCACTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS CAA 72 bp ACCACGGGATGGCTAGATGGAAGGTTGGTCAGGTGCTaGATGCTAATAGGGATCTTAGAGTCCTTCAGCAAG +
Preference number: 6 (lower is better)
Translates to: TTGWLDGRLVRC*MLIGILESFSK
Trigger: CTTGCTGAAGGACTCTAAGATCCCTATTAGCATCAAGCACCTGACCAACCTTCCATCTAGCCATCCCGTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357816.2
ENST00000515384.2
CDS CAA 72 bp GACATGCTTGTCACAGCTGGGACCTGCCTCTTCCTCTaGGTCTGCAATAATATCTCCACAGCCTGTAAGAGA +
Preference number: 6 (lower is better)
Translates to: DMLVTAGTCLFL*VCNNISTACKR
Trigger: TCTCTTACAGGCTGTGGAGATATTATTGCAGACCAAGAGGAAGAGGCAGGTCCCAGCTGTGACAAGCATGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515384.2
CDS GCA 72 bp CTTGTCACAGCTGGGACCTGCCTCTTCCTCTTGGTCTaGAATAATATCTCCACAGCCTGTAAGAGAGTCAAA +
Preference number: 6 (lower is better)
Translates to: LVTAGTCLFLLV*NNISTACKRVK
Trigger: TTTGACTCTCTTACAGGCTGTGGAGATATTATTGCAGACCAAGAGGAAGAGGCAGGTCCCAGCTGTGACAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515384.2