Pregenerated sensors for AMELY (Homo sapiens)

Ensembl gene IDs: ENSG00000099721

Ensembl transcript IDs: ENST00000215479.10, ENST00000383036.1, ENST00000651267.2

Found 2 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	CATGGGTTGCACAGGTGGCTGGGGCTGCATGGGCTGGTGAGGCTGTaGCTGAACAGGCTGGGGCTGGAAGGGCTGCTGGGCAGGCAGAGG	+
Preference number: 5 (lower is better) Translates to: HGLHRWLGLHGLVRL*LNRLGLEGLLGRQR Trigger: CCTCTGCCTGCCCAGCAGCCCTTCCAGCCCCAGCCTGTTCAGCCACAGCCTCACCAGCCCATGCAGCCCCAGCCACCTGTGCAACCCATG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000215479.10 ENST00000383036.1 ENST00000651267.2
CDS CCA 72 bp	TTTATATCCTTCAAGGTATCTGTTGATCCTAGGTTCTaGCGGGTCGGGGTCTGGCAGATCCTGGGTCCGGCC	+
Preference number: 6 (lower is better) Translates to: FISFKVSVDPRF*RVGVWQILGPA Trigger: GGCCGGACCCAGGATCTGCCAGACCCCGACCCGCCAGAACCTAGGATCAACAGATACCTTGAAGGATATAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651267.2

---

If you would like us to post a table for your organism of interest, or have questions, please reach out to eerik at stanford dot edu or xjgao at stanford.edu