RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AMBRA1 (Homo sapiens)

Ensembl gene IDs: ENSG00000110497

Ensembl transcript IDs: ENST00000314845.7, ENST00000458649.6, ENST00000524783.1, ENST00000526545.5, ENST00000526606.1, ENST00000528950.1, ENST00000529553.1, ENST00000529558.1, ENST00000529963.1, ENST00000531542.1, ENST00000533727.5, ENST00000534300.5, ENST00000683756.1

Found 1086 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GATGCAGCCAGCAGCTCTTCCACATGTCCAGTTCCCAGTCAGCTGTaGGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGC +
Preference number: 1 (lower is better)
Translates to: DAASSSSTCPVPSQL*GPVSAWRFEGRHQC
Trigger: GCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGACTGGGAACTGGACATGTGGAAGAGCTGCTGGCTGCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
3UTR GCA 90 bp GCTAGCTTTGGCCTAGGCTCAGGTAATACTGACACCCACAGGCGCTaGTCTGAGGGCCTTGCGGGGAGAAGACTGGTGGACAAGCCCTGG +
Preference number: 1 (lower is better)
Translates to: ASFGLGSGNTDTHRR*SEGLAGRRLVDKPW
Trigger: CCAGGGCTTGTCCACCAGTCTTCTCCCCGCAAGGCCCTCAGAGCAGCGCCTGTGGGTGTCAGTATTACCTGAGCCTAGGCCAAAGCTAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
3UTR CCA 90 bp CTGAAGCTCTGGAAGGCTCAGAGTTGGAGGTGGTGTCTGGGTTCCTaGTGGCTCTGCCCACCCAACAGGTGGACAGGGCAAAGCTGCCTC +
Preference number: 1 (lower is better)
Translates to: LKLWKAQSWRWCLGS*WLCPPNRWTGQSCL
Trigger: GAGGCAGCTTTGCCCTGTCCACCTGTTGGGTGGGCAGAGCCACCAGGAACCCAGACACCACCTCCAACTCTGAGCCTTCCAGAGCTTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
3UTR CCA 90 bp GGTGGACAGGGCAAAGCTGCCTCGCGGGCCTCTGTCCAGGATGATTaGCCCAGATCTGGAAGACTGTTCACTCTCTGGAGGCTCTCTGTC +
Preference number: 1 (lower is better)
Translates to: GGQGKAASRASVQDD*PRSGRLFTLWRLSV
Trigger: GACAGAGAGCCTCCAGAGAGTGAACAGTCTTCCAGATCTGGGCCAATCATCCTGGACAGAGGCCCGCGAGGCAGCTTTGCCCTGTCCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
3UTR TCA 90 bp CCCGATCCCTGTTGGTTTCAGTGGGGTAAGACGACGAAGAGAGGCTaGAGCTCTGGAAGGCTCAGAGTTGGAGGTGGTGTCTGGGTTCCT +
Preference number: 1 (lower is better)
Translates to: PDPCWFQWGKTTKRG*SSGRLRVGGGVWVP
Trigger: AGGAACCCAGACACCACCTCCAACTCTGAGCCTTCCAGAGCTTCAGCCTCTCTTCGTCGTCTTACCCCACTGAAACCAACAGGGATCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
3UTR CCA 90 bp CCATTAGTAAATGCCGAAGTCCCTGTCCTCAAGAATCTGGGAGCCTaGCCCGATCCCTGTTGGTTTCAGTGGGGTAAGACGACGAAGAGA +
Preference number: 1 (lower is better)
Translates to: PLVNAEVPVLKNLGA*PDPCWFQWGKTTKR
Trigger: TCTCTTCGTCGTCTTACCCCACTGAAACCAACAGGGATCGGGCCAGGCTCCCAGATTCTTGAGGACAGGGACTTCGGCATTTACTAATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
3UTR-3UTR TCA 90 bp GGAGGTGGTGTCTGGGTTCCTGGTGGCTCTGCCCACCCAACAGGTGGACAGGGCGTTCCCAGTCAGCTGTaGGGTCCGGTTTCTGCTTGG +
Preference number: 2 (lower is better)
Translates to: GGGVWVPGGSAHPTGGQGVPSQL*GPVSAW
Trigger: CCAAGCAGAAACCGGACCTCACAGCTGACTGGGAAC...GCCCTGTCCACCTGTTGGGTGGGCAGAGCCACCAGGAACCCAGACACCACCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
3UTR-3UTR CCA 90 bp GGAGGTGGTGTCTGGGTTCCTGGTGGCTCTGCCCACCCAACAGGTGGACAGGGCCCGGGCTCCAGATCCTaGAAGGTTCTAGTTCCCCGA +
Preference number: 2 (lower is better)
Translates to: GGGVWVPGGSAHPTGGQGPGSRS*KVLVPR
Trigger: TCGGGGAACTAGAACCTTCCAGGATCTGGAGCCCGG...GCCCTGTCCACCTGTTGGGTGGGCAGAGCCACCAGGAACCCAGACACCACCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
3UTR-3UTR TCA 90 bp GAGTTGGAGGTGGTGTCTGGGTTCCTGGTGGCTCTGCCCACCCAACAGGTGGACCCTCCTCCTGTTCCCTaGTGCAGCCAGCAGCTCTTC +
Preference number: 2 (lower is better)
Translates to: ELEVVSGFLVALPTQQVDPPPVP*CSQQLF
Trigger: GAAGAGCTGCTGGCTGCATCAGGGAACAGGAGGAGG...GTCCACCTGTTGGGTGGGCAGAGCCACCAGGAACCCAGACACCACCTCCAACTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
3UTR-3UTR GCA 90 bp GAGTTGGAGGTGGTGTCTGGGTTCCTGGTGGCTCTGCCCACCCAACAGGTGGACGTGAGGTCCGGTTTCTaGTTGGCGGTTCGAGGGGAG +
Preference number: 2 (lower is better)
Translates to: ELEVVSGFLVALPTQQVDVRSGF*LAVRGE
Trigger: CTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCAC...GTCCACCTGTTGGGTGGGCAGAGCCACCAGGAACCCAGACACCACCTCCAACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
3UTR-3UTR TCA 90 bp GTGGTGTCTGGGTTCCTGGTGGCTCTGCCCACCCAACAGGTGGACAGGGCAAAGGTTCCCAGTCAGCTGTaGGGTCCGGTTTCTGCTTGG +
Preference number: 2 (lower is better)
Translates to: VVSGFLVALPTQQVDRAKVPSQL*GPVSAW
Trigger: CCAAGCAGAAACCGGACCTCACAGCTGACTGGGAAC...CTTTGCCCTGTCCACCTGTTGGGTGGGCAGAGCCACCAGGAACCCAGACACCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
3UTR-3UTR CCA 90 bp GCTCAGGTAATACTGACACCCACAGGCGCTGCTCTGAGGGCCTTGCGGGGAGAAGTTGGAGGTGGTGTCTaGGTTCCTGGTGGCTCTGCC +
Preference number: 2 (lower is better)
Translates to: AQVILTPTGAALRALRGEVGGGV*VPGGSA
Trigger: GGCAGAGCCACCAGGAACCCAGACACCACCTCCAAC...TTCTCCCCGCAAGGCCCTCAGAGCAGCGCCTGTGGGTGTCAGTATTACCTGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
3UTR CAA 90 bp GGGGTAAGACGACGAAGAGAGGCTGAAGCTCTGGAAGGCTCAGAGTaGGAGGTGGTGTCTGGGTTCCTGGTGGCTCTGCCCACCCAACAG +
Preference number: 2 (lower is better)
Translates to: GVRRRREAEALEGSE*EVVSGFLVALPTQQ
Trigger: CTGTTGGGTGGGCAGAGCCACCAGGAACCCAGACACCACCTCCAACTCTGAGCCTTCCAGAGCTTCAGCCTCTCTTCGTCGTCTTACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
3UTR-3UTR TCA 90 bp AAATCACAGACTGAGACCTCACATTCTGACCTGGAGTCTCCTCCCCTTCCCCAGCCACAGGCGCTGCTCTaGGGGCCTTGCGGGGAGAAG +
Preference number: 2 (lower is better)
Translates to: KSQTETSHSDLESPPLPQPQALL*GPCGEK
Trigger: CTTCTCCCCGCAAGGCCCTCAGAGCAGCGCCTGTGG...CTGGGGAAGGGGAGGAGACTCCAGGTCAGAATGTGAGGTCTCAGTCTGTGATTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
3UTR-3UTR GCA 90 bp CTGCCTCGCGGGCCTCTGTCCAGGATGATTGGCCCAGATCTGGAAGACTGTTCAGTGAGGTCCGGTTTCTaGTTGGCGGTTCGAGGGGAG +
Preference number: 2 (lower is better)
Translates to: LPRGPLSRMIGPDLEDCSVRSGF*LAVRGE
Trigger: CTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCAC...TGAACAGTCTTCCAGATCTGGGCCAATCATCCTGGACAGAGGCCCGCGAGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
3UTR-3UTR CCA 90 bp AAATGCCGAAGTCCCTGTCCTCAAGAATCTGGGAGCCTGGCCCGATCCCTGTTGGGTCCGGTTTCTGCTTaGCGGTTCGAGGGGAGGCAC +
Preference number: 2 (lower is better)
Translates to: KCRSPCPQESGSLARSLLGPVSA*RFEGRH
Trigger: GTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACC...CAACAGGGATCGGGCCAGGCTCCCAGATTCTTGAGGACAGGGACTTCGGCATTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
3UTR-3UTR TCA 90 bp ATGCCGAAGTCCCTGTCCTCAAGAATCTGGGAGCCTGGCCCGATCCCTGTTGGTGGCCTCTGTCCAGGATaGTTGGCCCAGATCTGGAAG +
Preference number: 2 (lower is better)
Translates to: MPKSLSSRIWEPGPIPVGGLCPG*LAQIWK
Trigger: CTTCCAGATCTGGGCCAATCATCCTGGACAGAGGCC...ACCAACAGGGATCGGGCCAGGCTCCCAGATTCTTGAGGACAGGGACTTCGGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
3UTR-3UTR TCA 90 bp CTGCCTCGCGGGCCTCTGTCCAGGATGATTGGCCCAGATCTGGAAGACTGTTCACTGTCTTGTGCCCACTaGCTGATCTTCCTCTCCACC +
Preference number: 2 (lower is better)
Translates to: LPRGPLSRMIGPDLEDCSLSCAH*LIFLST
Trigger: GGTGGAGAGGAAGATCAGTCAGTGGGCACAAGACAG...TGAACAGTCTTCCAGATCTGGGCCAATCATCCTGGACAGAGGCCCGCGAGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
3UTR-3UTR CCA 90 bp ATGCCGAAGTCCCTGTCCTCAAGAATCTGGGAGCCTGGCCCGATCCCTGTTGGTATTAAGCCCACAGTGTaGCTCTCCCGGGCTCCAGAT +
Preference number: 2 (lower is better)
Translates to: MPKSLSSRIWEPGPIPVGIKPTV*LSRAPD
Trigger: ATCTGGAGCCCGGGAGAGCCACACTGTGGGCTTAAT...ACCAACAGGGATCGGGCCAGGCTCCCAGATTCTTGAGGACAGGGACTTCGGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
3UTR-3UTR CCA 90 bp AAGTCCCTGTCCTCAAGAATCTGGGAGCCTGGCCCGATCCCTGTTGGTTTCAGTGTTGGAGGTGGTGTCTaGGTTCCTGGTGGCTCTGCC +
Preference number: 2 (lower is better)
Translates to: KSLSSRIWEPGPIPVGFSVGGGV*VPGGSA
Trigger: GGCAGAGCCACCAGGAACCCAGACACCACCTCCAAC...ACTGAAACCAACAGGGATCGGGCCAGGCTCCCAGATTCTTGAGGACAGGGACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
3UTR-3UTR GCA 90 bp AAATCACAGACTGAGACCTCACATTCTGACCTGGAGTCTCCTCCCCTTCCCCAGGGTTCCTGGTGGCTCTaGCCACCCAACAGGTGGACA +
Preference number: 2 (lower is better)
Translates to: KSQTETSHSDLESPPLPQGSWWL*PPNRWT
Trigger: TGTCCACCTGTTGGGTGGGCAGAGCCACCAGGAACC...CTGGGGAAGGGGAGGAGACTCCAGGTCAGAATGTGAGGTCTCAGTCTGTGATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
3UTR-3UTR CCA 90 bp AAATCACAGACTGAGACCTCACATTCTGACCTGGAGTCTCCTCCCCTTCCCCAGTGTCTGGGTTCCTGGTaGCTCTGCCCACCCAACAGG +
Preference number: 2 (lower is better)
Translates to: KSQTETSHSDLESPPLPQCLGSW*LCPPNR
Trigger: CCTGTTGGGTGGGCAGAGCCACCAGGAACCCAGACA...CTGGGGAAGGGGAGGAGACTCCAGGTCAGAATGTGAGGTCTCAGTCTGTGATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
3UTR-3UTR CCA 90 bp ATCCCTGTTGGTTTCAGTGGGGTAAGACGACGAAGAGAGGCTGAAGCTCTGGAATGCCCACCCAACAGGTaGACAGGGCAAAGCTGCCTC +
Preference number: 2 (lower is better)
Translates to: IPVGFSGVRRRREAEALECPPNR*TGQSCL
Trigger: GAGGCAGCTTTGCCCTGTCCACCTGTTGGGTGGGCA...TTCCAGAGCTTCAGCCTCTCTTCGTCGTCTTACCCCACTGAAACCAACAGGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
3UTR-3UTR GCA 90 bp GCTCAGGTAATACTGACACCCACAGGCGCTGCTCTGAGGGCCTTGCGGGGAGAACATTTGACTGTCTTGTaGCCACTGACTGATCTTCCT +
Preference number: 2 (lower is better)
Translates to: AQVILTPTGAALRALRGEHLTVL*PLTDLP
Trigger: AGGAAGATCAGTCAGTGGGCACAAGACAGTCAAATG...TTCTCCCCGCAAGGCCCTCAGAGCAGCGCCTGTGGGTGTCAGTATTACCTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
3UTR-3UTR CCA 90 bp AAATGCCGAAGTCCCTGTCCTCAAGAATCTGGGAGCCTGGCCCGATCCCTGTTGGTTACTAGGAGAAAGTaGGGTGCCTGGCAGAGATAC +
Preference number: 2 (lower is better)
Translates to: KCRSPCPQESGSLARSLLVTRRK*GAWQRY
Trigger: GTATCTCTGCCAGGCACCCCACTTTCTCCTAGTAAC...CAACAGGGATCGGGCCAGGCTCCCAGATTCTTGAGGACAGGGACTTCGGCATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
3UTR-3UTR CCA 90 bp AAATCACAGACTGAGACCTCACATTCTGACCTGGAGTCTCCTCCCCTTCCCCAGAGACTGTTCACTCTCTaGAGGCTCTCTGTCCAGGGC +
Preference number: 2 (lower is better)
Translates to: KSQTETSHSDLESPPLPQRLFTL*RLSVQG
Trigger: GCCCTGGACAGAGAGCCTCCAGAGAGTGAACAGTCT...CTGGGGAAGGGGAGGAGACTCCAGGTCAGAATGTGAGGTCTCAGTCTGTGATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
3UTR-3UTR CCA 90 bp AAATCACAGACTGAGACCTCACATTCTGACCTGGAGTCTCCTCCCCTTCCCCAGTGGCCCGATCCCTGTTaGTTTCAGTGGGGTAAGACG +
Preference number: 2 (lower is better)
Translates to: KSQTETSHSDLESPPLPQWPDPC*FQWGKT
Trigger: CGTCTTACCCCACTGAAACCAACAGGGATCGGGCCA...CTGGGGAAGGGGAGGAGACTCCAGGTCAGAATGTGAGGTCTCAGTCTGTGATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
3UTR-3UTR CCA 90 bp AAGTCCCTGTCCTCAAGAATCTGGGAGCCTGGCCCGATCCCTGTTGGTTTCAGTTCTGTCCAGGATGATTaGCCCAGATCTGGAAGACTG +
Preference number: 2 (lower is better)
Translates to: KSLSSRIWEPGPIPVGFSSVQDD*PRSGRL
Trigger: CAGTCTTCCAGATCTGGGCCAATCATCCTGGACAGA...ACTGAAACCAACAGGGATCGGGCCAGGCTCCCAGATTCTTGAGGACAGGGACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
3UTR-3UTR CCA 90 bp AAATCACAGACTGAGACCTCACATTCTGACCTGGAGTCTCCTCCCCTTCCCCAGAAGAATCTGGGAGCCTaGCCCGATCCCTGTTGGTTT +
Preference number: 2 (lower is better)
Translates to: KSQTETSHSDLESPPLPQKNLGA*PDPCWF
Trigger: AAACCAACAGGGATCGGGCCAGGCTCCCAGATTCTT...CTGGGGAAGGGGAGGAGACTCCAGGTCAGAATGTGAGGTCTCAGTCTGTGATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
3UTR-3UTR GCA 90 bp TGTAGACTATCCCCTCTCCTCCCACCACAATGTTTCTATGATGAGTTACAAACATGGACAGGGCAAAGCTaGCTCGCGGGCCTCTGTCCA +
Preference number: 2 (lower is better)
Translates to: CRLSPLLPPQCFYDELQTWTGQS*LAGLCP
Trigger: TGGACAGAGGCCCGCGAGGCAGCTTTGCCCTGTCCA...TGTTTGTAACTCATCATAGAAACATTGTGGTGGGAGGAGAGGGGATAGTCTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
3UTR-3UTR CCA 90 bp GTACAGTTAAGAGTCCACATGCAACACCTTAAATCACAGACTGAGACCTCACATGGTCCGGTTTCTGCTTaGCGGTTCGAGGGGAGGCAC +
Preference number: 2 (lower is better)
Translates to: VQLRVHMQHLKSQTETSHGPVSA*RFEGRH
Trigger: GTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACC...ATGTGAGGTCTCAGTCTGTGATTTAAGGTGTTGCATGTGGACTCTTAACTGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
3UTR-3UTR GCA 90 bp GTACAGTTAAGAGTCCACATGCAACACCTTAAATCACAGACTGAGACCTCACATGTGAGGTCCGGTTTCTaGTTGGCGGTTCGAGGGGAG +
Preference number: 2 (lower is better)
Translates to: VQLRVHMQHLKSQTETSHVRSGF*LAVRGE
Trigger: CTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCAC...ATGTGAGGTCTCAGTCTGTGATTTAAGGTGTTGCATGTGGACTCTTAACTGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
3UTR-3UTR TCA 90 bp TGTAGACTATCCCCTCTCCTCCCACCACAATGTTTCTATGATGAGTTACAAACAGTTCCCAGTCAGCTGTaGGGTCCGGTTTCTGCTTGG +
Preference number: 2 (lower is better)
Translates to: CRLSPLLPPQCFYDELQTVPSQL*GPVSAW
Trigger: CCAAGCAGAAACCGGACCTCACAGCTGACTGGGAAC...TGTTTGTAACTCATCATAGAAACATTGTGGTGGGAGGAGAGGGGATAGTCTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
3UTR-3UTR TCA 90 bp GTACAGTTAAGAGTCCACATGCAACACCTTAAATCACAGACTGAGACCTCACATGTTCCCAGTCAGCTGTaGGGTCCGGTTTCTGCTTGG +
Preference number: 2 (lower is better)
Translates to: VQLRVHMQHLKSQTETSHVPSQL*GPVSAW
Trigger: CCAAGCAGAAACCGGACCTCACAGCTGACTGGGAAC...ATGTGAGGTCTCAGTCTGTGATTTAAGGTGTTGCATGTGGACTCTTAACTGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
3UTR-3UTR TCA 90 bp TGTAGACTATCCCCTCTCCTCCCACCACAATGTTTCTATGATGAGTTACAAACAGGCCTCTGTCCAGGATaGTTGGCCCAGATCTGGAAG +
Preference number: 2 (lower is better)
Translates to: CRLSPLLPPQCFYDELQTGLCPG*LAQIWK
Trigger: CTTCCAGATCTGGGCCAATCATCCTGGACAGAGGCC...TGTTTGTAACTCATCATAGAAACATTGTGGTGGGAGGAGAGGGGATAGTCTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
3UTR-3UTR GCA 90 bp TGTAGACTATCCCCTCTCCTCCCACCACAATGTTTCTATGATGAGTTACAAACACCCCGAGGCAGGCCTTaGCCATTTGACTGTCTTGTG +
Preference number: 2 (lower is better)
Translates to: CRLSPLLPPQCFYDELQTPRGRP*PFDCLV
Trigger: CACAAGACAGTCAAATGGGCAAGGCCTGCCTCGGGG...TGTTTGTAACTCATCATAGAAACATTGTGGTGGGAGGAGAGGGGATAGTCTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
3UTR-3UTR CCA 90 bp TGTAGACTATCCCCTCTCCTCCCACCACAATGTTTCTATGATGAGTTACAAACACCGGGCTCCAGATCCTaGAAGGTTCTAGTTCCCCGA +
Preference number: 2 (lower is better)
Translates to: CRLSPLLPPQCFYDELQTPGSRS*KVLVPR
Trigger: TCGGGGAACTAGAACCTTCCAGGATCTGGAGCCCGG...TGTTTGTAACTCATCATAGAAACATTGTGGTGGGAGGAGAGGGGATAGTCTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
3UTR-3UTR CCA 90 bp GTACAGTTAAGAGTCCACATGCAACACCTTAAATCACAGACTGAGACCTCACATCCCTGTTGGTTTCAGTaGGGTAAGACGACGAAGAGA +
Preference number: 2 (lower is better)
Translates to: VQLRVHMQHLKSQTETSHPCWFQ*GKTTKR
Trigger: TCTCTTCGTCGTCTTACCCCACTGAAACCAACAGGG...ATGTGAGGTCTCAGTCTGTGATTTAAGGTGTTGCATGTGGACTCTTAACTGTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
3UTR CCA 72 bp GGCGCTGCTCTGAGGGCCTTGCGGGGAGAAGACTGGTaGACAAGCCCTGGGGGCTGGCCAGCCTACACCCCC +
Preference number: 3 (lower is better)
Translates to: GAALRALRGEDW*TSPGGWPAYTP
Trigger: GGGGGTGTAGGCTGGCCAGCCCCCAGGGCTTGTCCACCAGTCTTCTCCCCGCAAGGCCCTCAGAGCAGCGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
3UTR CCA 72 bp ACAGGCGCTGCTCTGAGGGCCTTGCGGGGAGAAGACTaGTGGACAAGCCCTGGGGGCTGGCCAGCCTACACC +
Preference number: 3 (lower is better)
Translates to: TGAALRALRGED*WTSPGGWPAYT
Trigger: GGTGTAGGCTGGCCAGCCCCCAGGGCTTGTCCACCAGTCTTCTCCCCGCAAGGCCCTCAGAGCAGCGCCTGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
3UTR CCA 72 bp TGGAAGGCTCAGAGTTGGAGGTGGTGTCTGGGTTCCTaGTGGCTCTGCCCACCCAACAGGTGGACAGGGCAA +
Preference number: 3 (lower is better)
Translates to: WKAQSWRWCLGS*WLCPPNRWTGQ
Trigger: TTGCCCTGTCCACCTGTTGGGTGGGCAGAGCCACCAGGAACCCAGACACCACCTCCAACTCTGAGCCTTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
3UTR-3UTR CAA 90 bp GGAGGTGGTGTCTGGGTTCCTGGTGGCTCTGCCCACCCAACAGGTGGACAGGGCGCCCATTTGACTGTCTaGTGCCCACTGACTGATCTT +
Preference number: 3 (lower is better)
Translates to: GGGVWVPGGSAHPTGGQGAHLTV*CPLTDL
Trigger: AAGATCAGTCAGTGGGCACAAGACAGTCAAATGGGC...GCCCTGTCCACCTGTTGGGTGGGCAGAGCCACCAGGAACCCAGACACCACCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
3UTR-3UTR CAA 90 bp GCTCAGGTAATACTGACACCCACAGGCGCTGCTCTGAGGGCCTTGCGGGGAGAACTGGAAGGCTCAGAGTaGGAGGTGGTGTCTGGGTTC +
Preference number: 3 (lower is better)
Translates to: AQVILTPTGAALRALRGELEGSE*EVVSGF
Trigger: GAACCCAGACACCACCTCCAACTCTGAGCCTTCCAG...TTCTCCCCGCAAGGCCCTCAGAGCAGCGCCTGTGGGTGTCAGTATTACCTGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
3UTR TCA 72 bp AGCAGCTCTTCCACATGTCCAGTTCCCAGTCAGCTGTaGGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGG +
Preference number: 3 (lower is better)
Translates to: SSSSTCPVPSQL*GPVSAWRFEGR
Trigger: CCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGACTGGGAACTGGACATGTGGAAGAGCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
3UTR GCA 72 bp ATGTCCAGTTCCCAGTCAGCTGTGAGGTCCGGTTTCTaGTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGT +
Preference number: 3 (lower is better)
Translates to: MSSSQSAVRSGF*LAVRGEAPVQR
Trigger: ACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGACTGGGAACTGGACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
3UTR-3UTR CAA 90 bp ATGCCGAAGTCCCTGTCCTCAAGAATCTGGGAGCCTGGCCCGATCCCTGTTGGTGCAGGCCTTGCCCATTaGACTGTCTTGTGCCCACTG +
Preference number: 3 (lower is better)
Translates to: MPKSLSSRIWEPGPIPVGAGLAH*TVLCPL
Trigger: CAGTGGGCACAAGACAGTCAAATGGGCAAGGCCTGC...ACCAACAGGGATCGGGCCAGGCTCCCAGATTCTTGAGGACAGGGACTTCGGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
3UTR CCA 72 bp AATGCCGAAGTCCCTGTCCTCAAGAATCTGGGAGCCTaGCCCGATCCCTGTTGGTTTCAGTGGGGTAAGACG +
Preference number: 3 (lower is better)
Translates to: NAEVPVLKNLGA*PDPCWFQWGKT
Trigger: CGTCTTACCCCACTGAAACCAACAGGGATCGGGCCAGGCTCCCAGATTCTTGAGGACAGGGACTTCGGCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
3UTR-3UTR CAA 90 bp GAGATACCCACTTGTTCCTCTATTCACATTAAGCCCACAGTGTGGCTCTCCCGGGCAGGCCTTGCCCATTaGACTGTCTTGTGCCCACTG +
Preference number: 3 (lower is better)
Translates to: EIPTCSSIHIKPTVWLSRAGLAH*TVLCPL
Trigger: CAGTGGGCACAAGACAGTCAAATGGGCAAGGCCTGC...CCGGGAGAGCCACACTGTGGGCTTAATGTGAATAGAGGAACAAGTGGGTATCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
3UTR TCA 72 bp TGTTGGTTTCAGTGGGGTAAGACGACGAAGAGAGGCTaGAGCTCTGGAAGGCTCAGAGTTGGAGGTGGTGTC +
Preference number: 3 (lower is better)
Translates to: CWFQWGKTTKRG*SSGRLRVGGGV
Trigger: GACACCACCTCCAACTCTGAGCCTTCCAGAGCTTCAGCCTCTCTTCGTCGTCTTACCCCACTGAAACCAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
3UTR-3UTR CAA 90 bp AAGTCCCTGTCCTCAAGAATCTGGGAGCCTGGCCCGATCCCTGTTGGTTTCAGTGCCCATTTGACTGTCTaGTGCCCACTGACTGATCTT +
Preference number: 3 (lower is better)
Translates to: KSLSSRIWEPGPIPVGFSAHLTV*CPLTDL
Trigger: AAGATCAGTCAGTGGGCACAAGACAGTCAAATGGGC...ACTGAAACCAACAGGGATCGGGCCAGGCTCCCAGATTCTTGAGGACAGGGACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
3UTR-3UTR CAA 90 bp TGTAGACTATCCCCTCTCCTCCCACCACAATGTTTCTATGATGAGTTACAAACAAAAATGATCAGAGCCTaGATTTCTCCACTAGAAACT +
Preference number: 3 (lower is better)
Translates to: CRLSPLLPPQCFYDELQTKMIRA*ISPLET
Trigger: AGTTTCTAGTGGAGAAATCAAGGCTCTGATCATTTT...TGTTTGTAACTCATCATAGAAACATTGTGGTGGGAGGAGAGGGGATAGTCTACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp GTGGTGTCTGGGTTCCTGGTGGCTCTGCCCACCCAACAGGTGGACAGGGCAAAGCAGGAGAAGGCGGCTTaGGCGCGGGGCCTCGCGGAC +
Preference number: 4 (lower is better)
Translates to: VVSGFLVALPTQQVDRAKQEKAA*ARGLAD
Trigger: GTCCGCGAGGCCCCGCGCTCAAGCCGCCTTCTCCTG...CTTTGCCCTGTCCACCTGTTGGGTGGGCAGAGCCACCAGGAACCCAGACACCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534300.5
CDS-3UTR GCA 90 bp GGAGGTGGTGTCTGGGTTCCTGGTGGCTCTGCCCACCCAACAGGTGGACAGGGCGACACCCACAGGCGCTaGTCTGAGGGCCTTGCGGGG +
Preference number: 4 (lower is better)
Translates to: GGGVWVPGGSAHPTGGQGDTHRR*SEGLAG
Trigger: CCCCGCAAGGCCCTCAGAGCAGCGCCTGTGGGTGTC...GCCCTGTCCACCTGTTGGGTGGGCAGAGCCACCAGGAACCCAGACACCACCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GGAGGTGGTGTCTGGGTTCCTGGTGGCTCTGCCCACCCAACAGGTGGACAGGGCGGAAGAGGGCAGGGTTaGCTGGGTTGGCTCCCGCCC +
Preference number: 4 (lower is better)
Translates to: GGGVWVPGGSAHPTGGQGGRGQG*LGWLPP
Trigger: GGGCGGGAGCCAACCCAGCCAACCCTGCCCTCTTCC...GCCCTGTCCACCTGTTGGGTGGGCAGAGCCACCAGGAACCCAGACACCACCTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp AGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGCTGGTCCTGCTGCGTTaGCGAGGCCTGCTCCGGGGG +
Preference number: 4 (lower is better)
Translates to: SCEVRFLLGGSRGGTSATLVLLR*RGLLRG
Trigger: CCCCCGGAGCAGGCCTCGTCAACGCAGCAGGACCAG...CGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp CAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGGAGGGCAGGGTTGGCTaGGTTGGCTCCCGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: QSAVRSGFCLAVRGEAPVEGRVG*VGSRPG
Trigger: CCCTGGGCGGGAGCCAACCCAGCCAACCCTGCCCTC...CACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGACTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000526545.5
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp TCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACTGGTCCTGCTGCGTTaGCGAGGCCTGCTCCGGGGG +
Preference number: 4 (lower is better)
Translates to: SAVRSGFCLAVRGEAPVQLVLLR*RGLLRG
Trigger: CCCCCGGAGCAGGCCTCGTCAACGCAGCAGGACCAG...TTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp GGAGGTGGTGTCTGGGTTCCTGGTGGCTCTGCCCACCCAACAGGTGGACAGGGCTCTGGCTGCTGGGGATaGAAGCTGCCAGGAGCTGGC +
Preference number: 4 (lower is better)
Translates to: GGGVWVPGGSAHPTGGQGSGCWG*KLPGAG
Trigger: GCCAGCTCCTGGCAGCTTTCATCCCCAGCAGCCAGA...GCCCTGTCCACCTGTTGGGTGGGCAGAGCCACCAGGAACCCAGACACCACCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp CAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCCACAGGCGCTGCTCTaGGGGCCTTGCGGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: QSAVRSGFCLAVRGEAPVPQALL*GPCGEK
Trigger: CTTCTCCCCGCAAGGCCCTCAGAGCAGCGCCTGTGG...CACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGACTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp AGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGGCACCACGGCTGTCATaGCGCCCTCCGCCATCAGCC +
Preference number: 4 (lower is better)
Translates to: SCEVRFLLGGSRGGTSATAPRLS*RPPPSA
Trigger: GGCTGATGGCGGAGGGCGGCATGACAGCCGTGGTGC...CGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000526545.5
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GGAGGTGGTGTCTGGGTTCCTGGTGGCTCTGCCCACCCAACAGGTGGACAGGGCTCACCGAAGAGGCACTaGTTCTGGGCGGGGGCATGG +
Preference number: 4 (lower is better)
Translates to: GGGVWVPGGSAHPTGGQGSPKRH*FWAGAW
Trigger: CCATGCCCCCGCCCAGAACCAGTGCCTCTTCGGTGA...GCCCTGTCCACCTGTTGGGTGGGCAGAGCCACCAGGAACCCAGACACCACCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp TCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAAGAGGGCAGGGTTGGCTaGGTTGGCTCCCGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: SAVRSGFCLAVRGEAPVQEGRVG*VGSRPG
Trigger: CCCTGGGCGGGAGCCAACCCAGCCAACCCTGCCCTC...TTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000526545.5
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAGGAAGAGGGCAGGGTTaGCTGGGTTGGCTCCCGCCC +
Preference number: 4 (lower is better)
Translates to: VSCEVRFLLGGSRGGTSAGRGQG*LGWLPP
Trigger: GGGCGGGAGCCAACCCAGCCAACCCTGCCCTCTTCC...TGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000526545.5
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp GTGGTGTCTGGGTTCCTGGTGGCTCTGCCCACCCAACAGGTGGACAGGGCAAAGTCCTGCAGAAGCCGCTaGGCTCCCATGGCCCGAGCA +
Preference number: 4 (lower is better)
Translates to: VVSGFLVALPTQQVDRAKSCRSR*APMARA
Trigger: TGCTCGGGCCATGGGAGCTCAGCGGCTTCTGCAGGA...CTTTGCCCTGTCCACCTGTTGGGTGGGCAGAGCCACCAGGAACCCAGACACCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp GTGGTGTCTGGGTTCCTGGTGGCTCTGCCCACCCAACAGGTGGACAGGGCAAAGCCGGCGAACTGGCTGTaGTTGCAGGAGGGCACGCTG +
Preference number: 4 (lower is better)
Translates to: VVSGFLVALPTQQVDRAKPANWL*LQEGTL
Trigger: CAGCGTGCCCTCCTGCAATCACAGCCAGTTCGCCGG...CTTTGCCCTGTCCACCTGTTGGGTGGGCAGAGCCACCAGGAACCCAGACACCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp GGAGGTGGTGTCTGGGTTCCTGGTGGCTCTGCCCACCCAACAGGTGGACAGGGCCTCAGTTGCCAACCCTaGTGCCGGAAAACCCCTCCC +
Preference number: 4 (lower is better)
Translates to: GGGVWVPGGSAHPTGGQGLSCQP*CRKTPP
Trigger: GGGAGGGGTTTTCCGGCATCAGGGTTGGCAACTGAG...GCCCTGTCCACCTGTTGGGTGGGCAGAGCCACCAGGAACCCAGACACCACCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp GGAGGTGGTGTCTGGGTTCCTGGTGGCTCTGCCCACCCAACAGGTGGACAGGGCAGGGCTCGGTCTGGATaGCAGAAGAGCGGGAGGACA +
Preference number: 4 (lower is better)
Translates to: GGGVWVPGGSAHPTGGQGRARSG*QKSGRT
Trigger: TGTCCTCCCGCTCTTCTGGCATCCAGACCGAGCCCT...GCCCTGTCCACCTGTTGGGTGGGCAGAGCCACCAGGAACCCAGACACCACCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314845.7
ENST00000533727.5
CDS-3UTR GCA 90 bp GTGGTGTCTGGGTTCCTGGTGGCTCTGCCCACCCAACAGGTGGACAGGGCAAAGTGCGTTGACGAGGCCTaGTCCGGGGGATGGAAGGGC +
Preference number: 4 (lower is better)
Translates to: VVSGFLVALPTQQVDRAKCVDEA*SGGWKG
Trigger: GCCCTTCCATCCCCCGGAGCAGGCCTCGTCAACGCA...CTTTGCCCTGTCCACCTGTTGGGTGGGCAGAGCCACCAGGAACCCAGACACCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp GCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTGCGTTGACGAGGCCTaGTCCGGGGGATGGAAGGGC +
Preference number: 4 (lower is better)
Translates to: AVRSGFCLAVRGEAPVQRCVDEA*SGGWKG
Trigger: GCCCTTCCATCCCCCGGAGCAGGCCTCGTCAACGCA...ACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp AGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGAGGCCCTGGTCCTGCTaGGTTGACGAGGCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: SCEVRFLLGGSRGGTSATRPWSC*VDEACS
Trigger: GGAGCAGGCCTCGTCAACGCAGCAGGACCAGGGCCT...CGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp AGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGAGGAGGCCCTGGTCCTaGTGCGTTGACGAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: SCEVRFLLGGSRGGTSATRRPWS*CVDEAC
Trigger: GCAGGCCTCGTCAACGCAGCAGGACCAGGGCCTCCT...CGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp TCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAAGCACCACGGCTGTCATaGCGCCCTCCGCCATCAGCC +
Preference number: 4 (lower is better)
Translates to: SAVRSGFCLAVRGEAPVQAPRLS*RPPPSA
Trigger: GGCTGATGGCGGAGGGCGGCATGACAGCCGTGGTGC...TTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000526545.5
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp GCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTCCTCGCTCTGCCAGTTaGCCGGCCTCTGGGAGCAGT +
Preference number: 4 (lower is better)
Translates to: AVRSGFCLAVRGEAPVQRPRSAS*PASGSS
Trigger: ACTGCTCCCAGAGGCCGGGCAACTGGCAGAGCGAGG...ACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000526545.5
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp AGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGCCTCGCTCTGCCAGTTaGCCGGCCTCTGGGAGCAGT +
Preference number: 4 (lower is better)
Translates to: SCEVRFLLGGSRGGTSATPRSAS*PASGSS
Trigger: ACTGCTCCCAGAGGCCGGGCAACTGGCAGAGCGAGG...CGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000526545.5
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp GCTCAGGTAATACTGACACCCACAGGCGCTGCTCTGAGGGCCTTGCGGGGAGAAGACACCCACAGGCGCTaGTCTGAGGGCCTTGCGGGG +
Preference number: 4 (lower is better)
Translates to: AQVILTPTGAALRALRGEDTHRR*SEGLAG
Trigger: CCCCGCAAGGCCCTCAGAGCAGCGCCTGTGGGTGTC...TTCTCCCCGCAAGGCCCTCAGAGCAGCGCCTGTGGGTGTCAGTATTACCTGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAGCCTGCTCCGGGGGATaGAAGGGCTCGGTCTGGATG +
Preference number: 4 (lower is better)
Translates to: VSCEVRFLLGGSRGGTSAACSGG*KGSVWM
Trigger: CATCCAGACCGAGCCCTTCCATCCCCCGGAGCAGGC...TGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314845.7
ENST00000533727.5
CDS-3UTR CCA 90 bp GTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCATTCTGGGCGGGGGCATaGATTCCGCCTCAGAGCGGG +
Preference number: 4 (lower is better)
Translates to: VSCEVRFLLGGSRGGTSAFWAGA*IPPQSG
Trigger: CCCGCTCTGAGGCGGAATCCATGCCCCCGCCCAGAA...TGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp AGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGCCAGCCTGCTGGAGCTaGGCGTTTGGCCCTCAGTCC +
Preference number: 4 (lower is better)
Translates to: SCEVRFLLGGSRGGTSATPACWS*AFGPQS
Trigger: GGACTGAGGGCCAAACGCCCAGCTCCAGCAGGCTGG...CGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GGAGGTGGTGTCTGGGTTCCTGGTGGCTCTGCCCACCCAACAGGTGGACAGGGCTCAACTCCAGCCTGCTaGAGCTGGGCGTTTGGCCCT +
Preference number: 4 (lower is better)
Translates to: GGGVWVPGGSAHPTGGQGSTPAC*SWAFGP
Trigger: AGGGCCAAACGCCCAGCTCCAGCAGGCTGGAGTTGA...GCCCTGTCCACCTGTTGGGTGGGCAGAGCCACCAGGAACCCAGACACCACCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp CCAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTCGCCCATGGAGGCCATaGTGGTGCTCTGCTCCCGCT +
Preference number: 4 (lower is better)
Translates to: PVSCEVRFLLGGSRGGTSRPWRP*WCSAPA
Trigger: AGCGGGAGCAGAGCACCACCATGGCCTCCATGGGCG...ACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGACTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GTGGTGTCTGGGTTCCTGGTGGCTCTGCCCACCCAACAGGTGGACAGGGCAAAGCGCCCATGGAGGCCATaGTGGTGCTCTGCTCCCGCT +
Preference number: 4 (lower is better)
Translates to: VVSGFLVALPTQQVDRAKRPWRP*WCSAPA
Trigger: AGCGGGAGCAGAGCACCACCATGGCCTCCATGGGCG...CTTTGCCCTGTCCACCTGTTGGGTGGGCAGAGCCACCAGGAACCCAGACACCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GTGGTGTCTGGGTTCCTGGTGGCTCTGCCCACCCAACAGGTGGACAGGGCAAAGCCAGGGGTACCAGGCTaGTCCCAGGAAGCTGTCCGG +
Preference number: 4 (lower is better)
Translates to: VVSGFLVALPTQQVDRAKPGVPG*SQEAVR
Trigger: CCGGACAGCTTCCTGGGACCAGCCTGGTACCCCTGG...CTTTGCCCTGTCCACCTGTTGGGTGGGCAGAGCCACCAGGAACCCAGACACCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGCAGGGTTGGCTGGGTTaGCTCCCGCCCAGGGGTACC +
Preference number: 4 (lower is better)
Translates to: VRSGFCLAVRGEAPVQRLQGWLG*LPPRGT
Trigger: GGTACCCCTGGGCGGGAGCCAACCCAGCCAACCCTG...CAAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000526545.5
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GTGGTGTCTGGGTTCCTGGTGGCTCTGCCCACCCAACAGGTGGACAGGGCAAAGCTGGTGGACAAGCCCTaGGGGCTGGCCAGCCTACAC +
Preference number: 4 (lower is better)
Translates to: VVSGFLVALPTQQVDRAKLVDKP*GLASLH
Trigger: GTGTAGGCTGGCCAGCCCCCAGGGCTTGTCCACCAG...CTTTGCCCTGTCCACCTGTTGGGTGGGCAGAGCCACCAGGAACCCAGACACCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp AAATGCCGAAGTCCCTGTCCTCAAGAATCTGGGAGCCTGGCCCGATCCCTGTTGTCCTGGGGCGCTCCGTaGAGGGCTGAGGGGGAGGCG +
Preference number: 4 (lower is better)
Translates to: KCRSPCPQESGSLARSLLSWGAP*RAEGEA
Trigger: CGCCTCCCCCTCAGCCCTCCACGGAGCGCCCCAGGA...CAACAGGGATCGGGCCAGGCTCCCAGATTCTTGAGGACAGGGACTTCGGCATTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000458649.6
ENST00000534300.5
CDS-3UTR TCA 90 bp CCAGCAGCTCTTCCACATGTCCAGTTCCCAGTCAGCTGTGAGGTCCGGTTTCTGCTGGTCCTGCTGCGTTaGCGAGGCCTGCTCCGGGGG +
Preference number: 4 (lower is better)
Translates to: PAALPHVQFPVSCEVRFLLVLLR*RGLLRG
Trigger: CCCCCGGAGCAGGCCTCGTCAACGCAGCAGGACCAG...CAGAAACCGGACCTCACAGCTGACTGGGAACTGGACATGTGGAAGAGCTGCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp GTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCATCTGGCTGCTGGGGATaGAAGCTGCCAGGAGCTGGC +
Preference number: 4 (lower is better)
Translates to: VSCEVRFLLGGSRGGTSASGCWG*KLPGAG
Trigger: GCCAGCTCCTGGCAGCTTTCATCCCCAGCAGCCAGA...TGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp CCAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGGGCCTGTTGCAGCCTaGAGACCTGGGCCACCATGT +
Preference number: 4 (lower is better)
Translates to: PVSCEVRFLLGGSRGGTSGPVAA*RPGPPC
Trigger: ACATGGTGGCCCAGGTCTTCAGGCTGCAACAGGCCC...ACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGACTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp GAGTTGGAGGTGGTGTCTGGGTTCCTGGTGGCTCTGCCCACCCAACAGGTGGACGGGCCTGTTGCAGCCTaGAGACCTGGGCCACCATGT +
Preference number: 4 (lower is better)
Translates to: ELEVVSGFLVALPTQQVDGPVAA*RPGPPC
Trigger: ACATGGTGGCCCAGGTCTTCAGGCTGCAACAGGCCC...GTCCACCTGTTGGGTGGGCAGAGCCACCAGGAACCCAGACACCACCTCCAACTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp CTGCCTCGCGGGCCTCTGTCCAGGATGATTGGCCCAGATCTGGAAGACTGTTCACCACAGGCGCTGCTCTaGGGGCCTTGCGGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: LPRGPLSRMIGPDLEDCSPQALL*GPCGEK
Trigger: CTTCTCCCCGCAAGGCCCTCAGAGCAGCGCCTGTGG...TGAACAGTCTTCCAGATCTGGGCCAATCATCCTGGACAGAGGCCCGCGAGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp GAGTTGGAGGTGGTGTCTGGGTTCCTGGTGGCTCTGCCCACCCAACAGGTGGACCCCGCTGTCGGAGCCTaGTGTAAGCGGAAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: ELEVVSGFLVALPTQQVDPAVGA*CKRKSW
Trigger: CCAGGACTTCCGCTTACATCAGGCTCCGACAGCGGG...GTCCACCTGTTGGGTGGGCAGAGCCACCAGGAACCCAGACACCACCTCCAACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458649.6
ENST00000534300.5
CDS-3UTR TCA 90 bp CCAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTCCCGCTGTCGGAGCCTaGTGTAAGCGGAAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: PVSCEVRFLLGGSRGGTSPAVGA*CKRKSW
Trigger: CCAGGACTTCCGCTTACATCAGGCTCCGACAGCGGG...ACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGACTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458649.6
ENST00000534300.5
CDS-3UTR GCA 90 bp TCCAGTTCCCAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGAGGCCCTGGTCCTGCTaGGTTGACGAGGCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: SSSQSAVRSGFCLAVRGERPWSC*VDEACS
Trigger: GGAGCAGGCCTCGTCAACGCAGCAGGACCAGGGCCT...CTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGACTGGGAACTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp GCTCAGGTAATACTGACACCCACAGGCGCTGCTCTGAGGGCCTTGCGGGGAGAAAGGAGGCCCTGGTCCTaGTGCGTTGACGAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: AQVILTPTGAALRALRGERRPWS*CVDEAC
Trigger: GCAGGCCTCGTCAACGCAGCAGGACCAGGGCCTCCT...TTCTCCCCGCAAGGCCCTCAGAGCAGCGCCTGTGGGTGTCAGTATTACCTGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp GAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGTCAGGAGGCCCTGGTCCTaGTGCGTTGACGAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: EVRFLLGGSRGGTSATFVRRPWS*CVDEAC
Trigger: GCAGGCCTCGTCAACGCAGCAGGACCAGGGCCTCCT...GACAAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp GTGGTGTCTGGGTTCCTGGTGGCTCTGCCCACCCAACAGGTGGACAGGGCAAAGGGTTGCGGAGCGTGTTaGCGGCAGTGCTGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: VVSGFLVALPTQQVDRAKGCGAC*RQCCSG
Trigger: TCCAGAGCAGCACTGCCGGCAACACGCTCCGCAACC...CTTTGCCCTGTCCACCTGTTGGGTGGGCAGAGCCACCAGGAACCCAGACACCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp CCAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGGTTGCGGAGCGTGTTaGCGGCAGTGCTGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: PVSCEVRFLLGGSRGGTSGCGAC*RQCCSG
Trigger: TCCAGAGCAGCACTGCCGGCAACACGCTCCGCAACC...ACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGACTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp GTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCACAGACATCCGGGCATTaGGTGGAGCTCGGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: VSCEVRFLLGGSRGGTSAQTSGH*VELGAW
Trigger: CCAGGCACCGAGCTCCACGCAATGCCCGGATGTCTG...TGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp GTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACCTGGGCCACCATGTaGTCTGTGGAGGGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: VSCEVRFLLGGSRGGTSATWATM*SVEGCS
Trigger: GCTGCACCCCTCCACAGAGCACATGGTGGCCCAGGT...TGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp GTGGTGTCTGGGTTCCTGGTGGCTCTGCCCACCCAACAGGTGGACAGGGCAAAGACCTGGGCCACCATGTaGTCTGTGGAGGGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: VVSGFLVALPTQQVDRAKTWATM*SVEGCS
Trigger: GCTGCACCCCTCCACAGAGCACATGGTGGCCCAGGT...CTTTGCCCTGTCCACCTGTTGGGTGGGCAGAGCCACCAGGAACCCAGACACCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp GTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCACCACCATGGGCCTGTTaGAGCCTGAAGACCTGGGCC +
Preference number: 4 (lower is better)
Translates to: VSCEVRFLLGGSRGGTSAPPWAC*SLKTWA
Trigger: GGCCCAGGTCTTCAGGCTGCAACAGGCCCATGGTGG...TGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp GTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCATCCTCCATGTGGCTCTaGTGGTTCCAGGCCGCTCGC +
Preference number: 4 (lower is better)
Translates to: VSCEVRFLLGGSRGGTSASSMWL*WFQAAR
Trigger: GCGAGCGGCCTGGAACCAGCAGAGCCACATGGAGGA...TGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp AGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGTCTGCACCACGGCTGTCATaGCGCCCTCCGCCATCAGCC +
Preference number: 4 (lower is better)
Translates to: RSGFCLAVRGEAPVQRLSAPRLS*RPPPSA
Trigger: GGCTGATGGCGGAGGGCGGCATGACAGCCGTGGTGC...AGACAAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000526545.5
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp TCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAAGTGCTCTGCTCCCGCTaGACCACGGCTGTCATGCCG +
Preference number: 4 (lower is better)
Translates to: SAVRSGFCLAVRGEAPVQVLCSR*TTAVMP
Trigger: CGGCATGACAGCCGTGGTGCAGCGGGAGCAGAGCAC...TTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000526545.5
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp CCAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTTGGAGGCCATGGTGGTaGTCTGCTCCCGCTGCACCA +
Preference number: 4 (lower is better)
Translates to: PVSCEVRFLLGGSRGGTSWRPWW*SAPAAP
Trigger: TGGTGCAGCGGGAGCAGAGCACCACCATGGCCTCCA...ACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGACTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp GTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCACGGCACCAGGTTCAGTaGCCGTCTGAGAGCTGCGGT +
Preference number: 4 (lower is better)
Translates to: VSCEVRFLLGGSRGGTSARHQVQ*PSESCG
Trigger: ACCGCAGCTCTCAGACGGGCACTGAACCTGGTGCCG...TGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000526545.5
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp CAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCGGCACCAGGTTCAGTaGCCGTCTGAGAGCTGCGGT +
Preference number: 4 (lower is better)
Translates to: QSAVRSGFCLAVRGEAPVRHQVQ*PSESCG
Trigger: ACCGCAGCTCTCAGACGGGCACTGAACCTGGTGCCG...CACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000526545.5
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp TCCAGTTCCCAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGCCTCGCTCTGCCAGTTaGCCGGCCTCTGGGAGCAGT +
Preference number: 4 (lower is better)
Translates to: SSSQSAVRSGFCLAVRGEPRSAS*PASGSS
Trigger: ACTGCTCCCAGAGGCCGGGCAACTGGCAGAGCGAGG...CTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGACTGGGAACTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp GAGTTGGAGGTGGTGTCTGGGTTCCTGGTGGCTCTGCCCACCCAACAGGTGGACTGGACAGGGCAAAGCTaGCTCGCGGGCCTCTGTCCA +
Preference number: 4 (lower is better)
Translates to: ELEVVSGFLVALPTQQVDWTGQS*LAGLCP
Trigger: TGGACAGAGGCCCGCGAGGCAGCTTTGCCCTGTCCA...GTCCACCTGTTGGGTGGGCAGAGCCACCAGGAACCCAGACACCACCTCCAACTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp CTGCCTCGCGGGCCTCTGTCCAGGATGATTGGCCCAGATCTGGAAGACTGTTCAGACACCCACAGGCGCTaGTCTGAGGGCCTTGCGGGG +
Preference number: 4 (lower is better)
Translates to: LPRGPLSRMIGPDLEDCSDTHRR*SEGLAG
Trigger: CCCCGCAAGGCCCTCAGAGCAGCGCCTGTGGGTGTC...TGAACAGTCTTCCAGATCTGGGCCAATCATCCTGGACAGAGGCCCGCGAGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp GCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTGACGGGAGCTCGGTTTaGAGTCCAGCGAACGGGCTG +
Preference number: 4 (lower is better)
Translates to: AVRSGFCLAVRGEAPVQRDGSSV*SPANGL
Trigger: CAGCCCGTTCGCTGGACTGCAAACCGAGCTCCCGTC...ACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTCGGTTCAGGAGGCCCTaGTCCTGCTGCGTTGACGAG +
Preference number: 4 (lower is better)
Translates to: AVRSGFCLAVRGEAPVQRRFRRP*SCCVDE
Trigger: CTCGTCAACGCAGCAGGACCAGGGCCTCCTGAACCG...ACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GTGGTGTCTGGGTTCCTGGTGGCTCTGCCCACCCAACAGGTGGACAGGGCAAAGCGGTTCAGGAGGCCCTaGTCCTGCTGCGTTGACGAG +
Preference number: 4 (lower is better)
Translates to: VVSGFLVALPTQQVDRAKRFRRP*SCCVDE
Trigger: CTCGTCAACGCAGCAGGACCAGGGCCTCCTGAACCG...CTTTGCCCTGTCCACCTGTTGGGTGGGCAGAGCCACCAGGAACCCAGACACCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp TCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAATTCTGGGCGGGGGCATaGATTCCGCCTCAGAGCGGG +
Preference number: 4 (lower is better)
Translates to: SAVRSGFCLAVRGEAPVQFWAGA*IPPQSG
Trigger: CCCGCTCTGAGGCGGAATCCATGCCCCCGCCCAGAA...TTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GGAGGTGGTGTCTGGGTTCCTGGTGGCTCTGCCCACCCAACAGGTGGACAGGGCATTTCCTGGGCCTGTTaGGTCTGGGGAGCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: GGGVWVPGGSAHPTGGQGISWAC*VWGASP
Trigger: TGGGGAAGCTCCCCAGACCCAACAGGCCCAGGAAAT...GCCCTGTCCACCTGTTGGGTGGGCAGAGCCACCAGGAACCCAGACACCACCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp CCAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTCTGGAGCTGGGCGTTTaGCCCTCAGTCCGCTCGAGA +
Preference number: 4 (lower is better)
Translates to: PVSCEVRFLLGGSRGGTSLELGV*PSVRSR
Trigger: TCTCGAGCGGACTGAGGGCCAAACGCCCAGCTCCAG...ACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGACTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp CTGCCTCGCGGGCCTCTGTCCAGGATGATTGGCCCAGATCTGGAAGACTGTTCAGGCCAAGCCAAGCCCTaGCTCAGGCAGCCAACGGGC +
Preference number: 4 (lower is better)
Translates to: LPRGPLSRMIGPDLEDCSGQAKP*LRQPTG
Trigger: GCCCGTTGGCTGCCTGAGCCAGGGCTTGGCTTGGCC...TGAACAGTCTTCCAGATCTGGGCCAATCATCCTGGACAGAGGCCCGCGAGGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp ATGCCGAAGTCCCTGTCCTCAAGAATCTGGGAGCCTGGCCCGATCCCTGTTGGTGGCCAAGCCAAGCCCTaGCTCAGGCAGCCAACGGGC +
Preference number: 4 (lower is better)
Translates to: MPKSLSSRIWEPGPIPVGGQAKP*LRQPTG
Trigger: GCCCGTTGGCTGCCTGAGCCAGGGCTTGGCTTGGCC...ACCAACAGGGATCGGGCCAGGCTCCCAGATTCTTGAGGACAGGGACTTCGGCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp AGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGTCTGGCCAAGCCAAGCCCTaGCTCAGGCAGCCAACGGGC +
Preference number: 4 (lower is better)
Translates to: RSGFCLAVRGEAPVQRLSGQAKP*LRQPTG
Trigger: GCCCGTTGGCTGCCTGAGCCAGGGCTTGGCTTGGCC...AGACAAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000526545.5
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp AGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTCCATGTGGCTCTGCTaGTTCCAGGCCGCTCGCTGC +
Preference number: 4 (lower is better)
Translates to: SCEVRFLLGGSRGGTSATSMWLC*FQAARC
Trigger: GCAGCGAGCGGCCTGGAACCAGCAGAGCCACATGGA...CGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp CCAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTTCCATGTGGCTCTGCTaGTTCCAGGCCGCTCGCTGC +
Preference number: 4 (lower is better)
Translates to: PVSCEVRFLLGGSRGGTSSMWLC*FQAARC
Trigger: GCAGCGAGCGGCCTGGAACCAGCAGAGCCACATGGA...ACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGACTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GCTCAGGTAATACTGACACCCACAGGCGCTGCTCTGAGGGCCTTGCGGGGAGAACGCCCATGGAGGCCATaGTGGTGCTCTGCTCCCGCT +
Preference number: 4 (lower is better)
Translates to: AQVILTPTGAALRALRGERPWRP*WCSAPA
Trigger: AGCGGGAGCAGAGCACCACCATGGCCTCCATGGGCG...TTCTCCCCGCAAGGCCCTCAGAGCAGCGCCTGTGGGTGTCAGTATTACCTGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCATGCCGAAGCCGCCCATaGAGGCCATGGTGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: VSCEVRFLLGGSRGGTSACRSRP*RPWWCS
Trigger: AGAGCACCACCATGGCCTCCATGGGCGGCTTCGGCA...TGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000526545.5
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp AGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTGCCGAAGCCGCCCATaGAGGCCATGGTGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: SCEVRFLLGGSRGGTSATCRSRP*RPWWCS
Trigger: AGAGCACCACCATGGCCTCCATGGGCGGCTTCGGCA...CGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000526545.5
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp CCAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTTGGGGTGAGGAGGTGTaGGCGGCACCAGGTTCAGTG +
Preference number: 4 (lower is better)
Translates to: PVSCEVRFLLGGSRGGTSWGEEV*AAPGSV
Trigger: CACTGAACCTGGTGCCGCCCACACCTCCTCACCCCA...ACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGACTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCATGGGGTGAGGAGGTGTaGGCGGCACCAGGTTCAGTG +
Preference number: 4 (lower is better)
Translates to: VSCEVRFLLGGSRGGTSAWGEEV*AAPGSV
Trigger: CACTGAACCTGGTGCCGCCCACACCTCCTCACCCCA...TGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000526545.5
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTGGGGTGAGGAGGTGTaGGCGGCACCAGGTTCAGTG +
Preference number: 4 (lower is better)
Translates to: AVRSGFCLAVRGEAPVQRWGEEV*AAPGSV
Trigger: CACTGAACCTGGTGCCGCCCACACCTCCTCACCCCA...ACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000526545.5
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGCAGTTGCCCGGCCTCTaGGAGCAGTCCCCGAGAGGT +
Preference number: 4 (lower is better)
Translates to: VRSGFCLAVRGEAPVQRLQLPGL*EQSPRG
Trigger: ACCTCTCGGGGACTGCTCCCAGAGGCCGGGCAACTG...CAAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000526545.5
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp ATGCCGAAGTCCCTGTCCTCAAGAATCTGGGAGCCTGGCCCGATCCCTGTTGGTCAGGGTTGGCTGGGTTaGCTCCCGCCCAGGGGTACC +
Preference number: 4 (lower is better)
Translates to: MPKSLSSRIWEPGPIPVGQGWLG*LPPRGT
Trigger: GGTACCCCTGGGCGGGAGCCAACCCAGCCAACCCTG...ACCAACAGGGATCGGGCCAGGCTCCCAGATTCTTGAGGACAGGGACTTCGGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp TGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGGAAGAGGGCAGGGTTaGCTGGGTTGGCTCCCGCCC +
Preference number: 4 (lower is better)
Translates to: CEVRFLLGGSRGGTSATFGRGQG*LGWLPP
Trigger: GGGCGGGAGCCAACCCAGCCAACCCTGCCCTCTTCC...AAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000526545.5
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAGGTCCGGTTTCTGCTTaGCGGTTCGAGGGGAGGCAC +
Preference number: 4 (lower is better)
Translates to: VSCEVRFLLGGSRGGTSAGPVSA*RFEGRH
Trigger: GTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACC...TGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000526545.5
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp CAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGGGTCCGGTTTCTGCTTaGCGGTTCGAGGGGAGGCAC +
Preference number: 4 (lower is better)
Translates to: QSAVRSGFCLAVRGEAPVGPVSA*RFEGRH
Trigger: GTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACC...CACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000526545.5
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GGAGGTGGTGTCTGGGTTCCTGGTGGCTCTGCCCACCCAACAGGTGGACAGGGCCCTCACATTCTGACCTaGAGTCTCCTCCCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: GGGVWVPGGSAHPTGGQGPHILT*SLLPFP
Trigger: GGGGAAGGGGAGGAGACTCCAGGTCAGAATGTGAGG...GCCCTGTCCACCTGTTGGGTGGGCAGAGCCACCAGGAACCCAGACACCACCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAGCCTGCTCCGGGGGATaGAAGGGCTCGGTCTGTACA +
Preference number: 4 (lower is better)
Translates to: VSCEVRFLLGGSRGGTSAACSGG*KGSVCT
Trigger: TGTACAGACCGAGCCCTTCCATCCCCCGGAGCAGGC...TGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000458649.6
ENST00000534300.5
CDS-3UTR TCA 90 bp CTGCCTCGCGGGCCTCTGTCCAGGATGATTGGCCCAGATCTGGAAGACTGTTCATCCTGCAGAAGCCGCTaGGCTCCCATGGCCCGAGCA +
Preference number: 4 (lower is better)
Translates to: LPRGPLSRMIGPDLEDCSSCRSR*APMARA
Trigger: TGCTCGGGCCATGGGAGCTCAGCGGCTTCTGCAGGA...TGAACAGTCTTCCAGATCTGGGCCAATCATCCTGGACAGAGGCCCGCGAGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp ATGCCGAAGTCCCTGTCCTCAAGAATCTGGGAGCCTGGCCCGATCCCTGTTGGTCCGGCGAACTGGCTGTaGTTGCAGGAGGGCACGCTG +
Preference number: 4 (lower is better)
Translates to: MPKSLSSRIWEPGPIPVGPANWL*LQEGTL
Trigger: CAGCGTGCCCTCCTGCAATCACAGCCAGTTCGCCGG...ACCAACAGGGATCGGGCCAGGCTCCCAGATTCTTGAGGACAGGGACTTCGGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp AGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGTCTCCGGCGAACTGGCTGTaGTTGCAGGAGGGCACGCTG +
Preference number: 4 (lower is better)
Translates to: RSGFCLAVRGEAPVQRLSPANWL*LQEGTL
Trigger: CAGCGTGCCCTCCTGCAATCACAGCCAGTTCGCCGG...AGACAAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp CTGCCTCGCGGGCCTCTGTCCAGGATGATTGGCCCAGATCTGGAAGACTGTTCACCGGCGAACTGGCTGTaGTTGCAGGAGGGCACGCTG +
Preference number: 4 (lower is better)
Translates to: LPRGPLSRMIGPDLEDCSPANWL*LQEGTL
Trigger: CAGCGTGCCCTCCTGCAATCACAGCCAGTTCGCCGG...TGAACAGTCTTCCAGATCTGGGCCAATCATCCTGGACAGAGGCCCGCGAGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp AGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGCTCAGTTGCCAACCCTaGTGCCGGAAAACCCCTCCC +
Preference number: 4 (lower is better)
Translates to: SCEVRFLLGGSRGGTSATLSCQP*CRKTPP
Trigger: GGGAGGGGTTTTCCGGCATCAGGGTTGGCAACTGAG...CGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp GTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGGGGCCTGTTGCAGCCTaGAGACCTGGGCCACCATGT +
Preference number: 4 (lower is better)
Translates to: VRSGFCLAVRGEAPVQRLGPVAA*RPGPPC
Trigger: ACATGGTGGCCCAGGTCTTCAGGCTGCAACAGGCCC...CAAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp AGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGGCAGGGTTCCGGGGCTaGAGCCCAATGGCATTCATC +
Preference number: 4 (lower is better)
Translates to: SCEVRFLLGGSRGGTSATAGFRG*SPMAFI
Trigger: GATGAATGCCATTGGGCTTCAGCCCCGGAACCCTGC...CGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000526545.5
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp CAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGGCAGGGTTCCGGGGCTaGAGCCCAATGGCATTCATC +
Preference number: 4 (lower is better)
Translates to: QSAVRSGFCLAVRGEAPVAGFRG*SPMAFI
Trigger: GATGAATGCCATTGGGCTTCAGCCCCGGAACCCTGC...CACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000526545.5
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp GCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTCGGCATTCTGCAGCTaGAGGGCCAGAGTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: AVRSGFCLAVRGEAPVQRSAFCS*RARVWV
Trigger: CACCCAGACTCTGGCCCTTCAGCTGCAGAATGCCGA...ACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000526545.5
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp GAGTTGGAGGTGGTGTCTGGGTTCCTGGTGGCTCTGCCCACCCAACAGGTGGACTCGGCATTCTGCAGCTaGAGGGCCAGAGTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: ELEVVSGFLVALPTQQVDSAFCS*RARVWV
Trigger: CACCCAGACTCTGGCCCTTCAGCTGCAGAATGCCGA...GTCCACCTGTTGGGTGGGCAGAGCCACCAGGAACCCAGACACCACCTCCAACTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp ATGCCGAAGTCCCTGTCCTCAAGAATCTGGGAGCCTGGCCCGATCCCTGTTGGTACCTTCACCAGGACCTaGGGCGGCTGTCCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: MPKSLSSRIWEPGPIPVGTFTRT*GGCPWL
Trigger: GAGCCAGGGACAGCCGCCTCAGGTCCTGGTGAAGGT...ACCAACAGGGATCGGGCCAGGCTCCCAGATTCTTGAGGACAGGGACTTCGGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp AGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGTCTACCTTCACCAGGACCTaGGGCGGCTGTCCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: RSGFCLAVRGEAPVQRLSTFTRT*GGCPWL
Trigger: GAGCCAGGGACAGCCGCCTCAGGTCCTGGTGAAGGT...AGACAAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000526545.5
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp GTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCACTGCCCACTGTCCCTTaGCCCCATCCTGTATCAGGC +
Preference number: 4 (lower is better)
Translates to: VSCEVRFLLGGSRGGTSALPTVP*PHPVSG
Trigger: GCCTGATACAGGATGGGGTCAAGGGACAGTGGGCAG...TGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp GGAGGTGGTGTCTGGGTTCCTGGTGGCTCTGCCCACCCAACAGGTGGACAGGGCGTCCAGCGAACGGGCTaGGCCACAGGGAAAAAGAAA +
Preference number: 4 (lower is better)
Translates to: GGGVWVPGGSAHPTGGQGVQRTG*ATGKKK
Trigger: TTTCTTTTTCCCTGTGGCTCAGCCCGTTCGCTGGAC...GCCCTGTCCACCTGTTGGGTGGGCAGAGCCACCAGGAACCCAGACACCACCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp CTGCCTCGCGGGCCTCTGTCCAGGATGATTGGCCCAGATCTGGAAGACTGTTCAAGGCCCTGGTCCTGCTaGGTTGACGAGGCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: LPRGPLSRMIGPDLEDCSRPWSC*VDEACS
Trigger: GGAGCAGGCCTCGTCAACGCAGCAGGACCAGGGCCT...TGAACAGTCTTCCAGATCTGGGCCAATCATCCTGGACAGAGGCCCGCGAGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp ATGCCGAAGTCCCTGTCCTCAAGAATCTGGGAGCCTGGCCCGATCCCTGTTGGTAGGAGGCCCTGGTCCTaGTGCGTTGACGAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: MPKSLSSRIWEPGPIPVGRRPWS*CVDEAC
Trigger: GCAGGCCTCGTCAACGCAGCAGGACCAGGGCCTCCT...ACCAACAGGGATCGGGCCAGGCTCCCAGATTCTTGAGGACAGGGACTTCGGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp GAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGTCGGTTGCGGAGCGTGTTaGCGGCAGTGCTGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: EVRFLLGGSRGGTSATFVGCGAC*RQCCSG
Trigger: TCCAGAGCAGCACTGCCGGCAACACGCTCCGCAACC...GACAAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp GAGTTGGAGGTGGTGTCTGGGTTCCTGGTGGCTCTGCCCACCCAACAGGTGGACTGCTCAACTCCAGCCTaGTGGAGCTGGGCGTTTGGC +
Preference number: 4 (lower is better)
Translates to: ELEVVSGFLVALPTQQVDCSTPA*WSWAFG
Trigger: GCCAAACGCCCAGCTCCAGCAGGCTGGAGTTGAGCA...GTCCACCTGTTGGGTGGGCAGAGCCACCAGGAACCCAGACACCACCTCCAACTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp AGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGGCGTCCAAGCGAAGGTaGAGACATCCGGGCATTGCG +
Preference number: 4 (lower is better)
Translates to: SCEVRFLLGGSRGGTSATASKRR*RHPGIA
Trigger: CGCAATGCCCGGATGTCTGCACCTTCGCTTGGACGC...CGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp GCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTGCGTCCAAGCGAAGGTaGAGACATCCGGGCATTGCG +
Preference number: 4 (lower is better)
Translates to: AVRSGFCLAVRGEAPVQRASKRR*RHPGIA
Trigger: CGCAATGCCCGGATGTCTGCACCTTCGCTTGGACGC...ACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp AGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGGCTGGGGATGAAAGCTaGCAGGAGCTGGCCATCTGC +
Preference number: 4 (lower is better)
Translates to: SCEVRFLLGGSRGGTSATAGDES*QELAIC
Trigger: GCAGATGGCCAGCTCCTGGCAGCTTTCATCCCCAGC...CGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp CCAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCTGGGGATGAAAGCTaGCAGGAGCTGGCCATCTGC +
Preference number: 4 (lower is better)
Translates to: PVSCEVRFLLGGSRGGTSAGDES*QELAIC
Trigger: GCAGATGGCCAGCTCCTGGCAGCTTTCATCCCCAGC...ACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp GCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTGCTGGGGATGAAAGCTaGCAGGAGCTGGCCATCTGC +
Preference number: 4 (lower is better)
Translates to: AVRSGFCLAVRGEAPVQRAGDES*QELAIC
Trigger: GCAGATGGCCAGCTCCTGGCAGCTTTCATCCCCAGC...ACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp TCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACCACCATGGGCCTGTTaGAGCCTGAAGACCTGGGCC +
Preference number: 4 (lower is better)
Translates to: SAVRSGFCLAVRGEAPVQPPWAC*SLKTWA
Trigger: GGCCCAGGTCTTCAGGCTGCAACAGGCCCATGGTGG...TTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp TCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAATCCTCCATGTGGCTCTaGTGGTTCCAGGCCGCTCGC +
Preference number: 4 (lower is better)
Translates to: SAVRSGFCLAVRGEAPVQSSMWL*WFQAAR
Trigger: GCGAGCGGCCTGGAACCAGCAGAGCCACATGGAGGA...TTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp GCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTGGGCCAGAGTCTGGGTaGCCTGAGATGTCACTGAGG +
Preference number: 4 (lower is better)
Translates to: AVRSGFCLAVRGEAPVQRGPESG*PEMSLR
Trigger: CCTCAGTGACATCTCAGGGCACCCAGACTCTGGCCC...ACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000526545.5
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp CCAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGGGCCAGAGTCTGGGTaGCCTGAGATGTCACTGAGG +
Preference number: 4 (lower is better)
Translates to: PVSCEVRFLLGGSRGGTSGPESG*PEMSLR
Trigger: CCTCAGTGACATCTCAGGGCACCCAGACTCTGGCCC...ACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp TGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGTGCTCTGCTCCCGCTaGACCACGGCTGTCATGCCG +
Preference number: 4 (lower is better)
Translates to: CEVRFLLGGSRGGTSATFVLCSR*TTAVMP
Trigger: CGGCATGACAGCCGTGGTGCAGCGGGAGCAGAGCAC...AAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000526545.5
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp TCCAGTTCCCAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGCGGCACCAGGTTCAGTaGCCGTCTGAGAGCTGCGGT +
Preference number: 4 (lower is better)
Translates to: SSSQSAVRSGFCLAVRGERHQVQ*PSESCG
Trigger: ACCGCAGCTCTCAGACGGGCACTGAACCTGGTGCCG...CTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGACTGGGAACTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp CTGCCTCGCGGGCCTCTGTCCAGGATGATTGGCCCAGATCTGGAAGACTGTTCACCTCGCTCTGCCAGTTaGCCGGCCTCTGGGAGCAGT +
Preference number: 4 (lower is better)
Translates to: LPRGPLSRMIGPDLEDCSPRSAS*PASGSS
Trigger: ACTGCTCCCAGAGGCCGGGCAACTGGCAGAGCGAGG...TGAACAGTCTTCCAGATCTGGGCCAATCATCCTGGACAGAGGCCCGCGAGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp GAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGTCTGGACAGGGCAAAGCTaGCTCGCGGGCCTCTGTCCA +
Preference number: 4 (lower is better)
Translates to: EVRFLLGGSRGGTSATFVWTGQS*LAGLCP
Trigger: TGGACAGAGGCCCGCGAGGCAGCTTTGCCCTGTCCA...GACAAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp GTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAGGTTCCTGGTGGCTCTaGCCACCCAACAGGTGGACA +
Preference number: 4 (lower is better)
Translates to: VSCEVRFLLGGSRGGTSAGSWWL*PPNRWT
Trigger: TGTCCACCTGTTGGGTGGGCAGAGCCACCAGGAACC...TGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp GAGTTGGAGGTGGTGTCTGGGTTCCTGGTGGCTCTGCCCACCCAACAGGTGGACGCTCTCCCACCTGGATaGCAGAAGAGCGGGAGGACA +
Preference number: 4 (lower is better)
Translates to: ELEVVSGFLVALPTQQVDALPPG*QKSGRT
Trigger: TGTCCTCCCGCTCTTCTGGCATCCAGGTGGGAGAGC...GTCCACCTGTTGGGTGGGCAGAGCCACCAGGAACCCAGACACCACCTCCAACTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458649.6
ENST00000534300.5
CDS-3UTR GCA 90 bp AGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGGCTCTCCCACCTGGATaGCAGAAGAGCGGGAGGACA +
Preference number: 4 (lower is better)
Translates to: SCEVRFLLGGSRGGTSATALPPG*QKSGRT
Trigger: TGTCCTCCCGCTCTTCTGGCATCCAGGTGGGAGAGC...CGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458649.6
ENST00000534300.5
CDS-3UTR CCA 90 bp GGAGGTGGTGTCTGGGTTCCTGGTGGCTCTGCCCACCCAACAGGTGGACAGGGCATGTGCAGGAAATTGTaGAGGAGAGGCGTCCGGCGA +
Preference number: 4 (lower is better)
Translates to: GGGVWVPGGSAHPTGGQGMCRKL*RRGVRR
Trigger: TCGCCGGACGCCTCTCCTCCACAATTTCCTGCACAT...GCCCTGTCCACCTGTTGGGTGGGCAGAGCCACCAGGAACCCAGACACCACCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp CTGCCTCGCGGGCCTCTGTCCAGGATGATTGGCCCAGATCTGGAAGACTGTTCATTCTGGGCGGGGGCATaGATTCCGCCTCAGAGCGGG +
Preference number: 4 (lower is better)
Translates to: LPRGPLSRMIGPDLEDCSFWAGA*IPPQSG
Trigger: CCCGCTCTGAGGCGGAATCCATGCCCCCGCCCAGAA...TGAACAGTCTTCCAGATCTGGGCCAATCATCCTGGACAGAGGCCCGCGAGGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp TGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTTTCTGGGCGGGGGCATaGATTCCGCCTCAGAGCGGG +
Preference number: 4 (lower is better)
Translates to: CEVRFLLGGSRGGTSATFFWAGA*IPPQSG
Trigger: CCCGCTCTGAGGCGGAATCCATGCCCCCGCCCAGAA...AAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp CCAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTAAGAGGCACTGGTTCTaGGCGGGGGCATGGATTCCG +
Preference number: 4 (lower is better)
Translates to: PVSCEVRFLLGGSRGGTSKRHWF*AGAWIP
Trigger: CGGAATCCATGCCCCCGCCCAGAACCAGTGCCTCTT...ACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGACTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GTGGTGTCTGGGTTCCTGGTGGCTCTGCCCACCCAACAGGTGGACAGGGCAAAGAAGAGGCACTGGTTCTaGGCGGGGGCATGGATTCCG +
Preference number: 4 (lower is better)
Translates to: VVSGFLVALPTQQVDRAKKRHWF*AGAWIP
Trigger: CGGAATCCATGCCCCCGCCCAGAACCAGTGCCTCTT...CTTTGCCCTGTCCACCTGTTGGGTGGGCAGAGCCACCAGGAACCCAGACACCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGTCTCACCGAAGAGGCACTaGTTCTGGGCGGGGGCATGG +
Preference number: 4 (lower is better)
Translates to: EVRFLLGGSRGGTSATFVSPKRH*FWAGAW
Trigger: CCATGCCCCCGCCCAGAACCAGTGCCTCTTCGGTGA...GACAAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp AGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGGTTCTCACTGCTGTGTaGGGTGGGCTGGTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: SCEVRFLLGGSRGGTSATVLTAV*GGLVGR
Trigger: CCTTCCCACCAGCCCACCCCACACAGCAGTGAGAAC...CGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp CAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGGTTCTCACTGCTGTGTaGGGTGGGCTGGTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: QSAVRSGFCLAVRGEAPVVLTAV*GGLVGR
Trigger: CCTTCCCACCAGCCCACCCCACACAGCAGTGAGAAC...CACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GAGTTGGAGGTGGTGTCTGGGTTCCTGGTGGCTCTGCCCACCCAACAGGTGGACCGACAGCGATTCAGGTaGCCACGGGACAGGTTGGAG +
Preference number: 4 (lower is better)
Translates to: ELEVVSGFLVALPTQQVDRQRFR*PRDRLE
Trigger: CTCCAACCTGTCCCGTGGCCACCTGAATCGCTGTCG...GTCCACCTGTTGGGTGGGCAGAGCCACCAGGAACCCAGACACCACCTCCAACTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp CCAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTCGACAGCGATTCAGGTaGCCACGGGACAGGTTGGAG +
Preference number: 4 (lower is better)
Translates to: PVSCEVRFLLGGSRGGTSRQRFR*PRDRLE
Trigger: CTCCAACCTGTCCCGTGGCCACCTGAATCGCTGTCG...ACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GGAGGTGGTGTCTGGGTTCCTGGTGGCTCTGCCCACCCAACAGGTGGACAGGGCCACTCTCAAAGGAGCTaGGGACCTGCCAAGAGGAAC +
Preference number: 4 (lower is better)
Translates to: GGGVWVPGGSAHPTGGQGHSQRS*GPAKRN
Trigger: GTTCCTCTTGGCAGGTCCCCAGCTCCTTTGAGAGTG...GCCCTGTCCACCTGTTGGGTGGGCAGAGCCACCAGGAACCCAGACACCACCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp TCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACTGGAGCTGGGCGTTTaGCCCTCAGTCCGCTCGAGA +
Preference number: 4 (lower is better)
Translates to: SAVRSGFCLAVRGEAPVQLELGV*PSVRSR
Trigger: TCTCGAGCGGACTGAGGGCCAAACGCCCAGCTCCAG...TTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp TCCAGTTCCCAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGCTGGAGCTGGGCGTTTaGCCCTCAGTCCGCTCGAGA +
Preference number: 4 (lower is better)
Translates to: SSSQSAVRSGFCLAVRGELELGV*PSVRSR
Trigger: TCTCGAGCGGACTGAGGGCCAAACGCCCAGCTCCAG...CTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGACTGGGAACTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp AGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGTCTCCAGCCTGCTGGAGCTaGGCGTTTGGCCCTCAGTCC +
Preference number: 4 (lower is better)
Translates to: RSGFCLAVRGEAPVQRLSPACWS*AFGPQS
Trigger: GGACTGAGGGCCAAACGCCCAGCTCCAGCAGGCTGG...AGACAAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCACCACCATGTGCTCTGTaGAGGGGTGCAGCAGGATCC +
Preference number: 4 (lower is better)
Translates to: VSCEVRFLLGGSRGGTSAPPCAL*RGAAGS
Trigger: GGATCCTGCTGCACCCCTCCACAGAGCACATGGTGG...TGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp TCCAGTTCCCAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGTCCATGTGGCTCTGCTaGTTCCAGGCCGCTCGCTGC +
Preference number: 4 (lower is better)
Translates to: SSSQSAVRSGFCLAVRGESMWLC*FQAARC
Trigger: GCAGCGAGCGGCCTGGAACCAGCAGAGCCACATGGA...CTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGACTGGGAACTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp AGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGTCTCGCCCATGGAGGCCATaGTGGTGCTCTGCTCCCGCT +
Preference number: 4 (lower is better)
Translates to: RSGFCLAVRGEAPVQRLSRPWRP*WCSAPA
Trigger: AGCGGGAGCAGAGCACCACCATGGCCTCCATGGGCG...AGACAAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000526545.5
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp TGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTCAGTTGCCCGGCCTCTaGGAGCAGTCCCCGAGAGGT +
Preference number: 4 (lower is better)
Translates to: CEVRFLLGGSRGGTSATFQLPGL*EQSPRG
Trigger: ACCTCTCGGGGACTGCTCCCAGAGGCCGGGCAACTG...AAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000526545.5
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp AGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGTCTCAGTTGCCCGGCCTCTaGGAGCAGTCCCCGAGAGGT +
Preference number: 4 (lower is better)
Translates to: RSGFCLAVRGEAPVQRLSQLPGL*EQSPRG
Trigger: ACCTCTCGGGGACTGCTCCCAGAGGCCGGGCAACTG...AGACAAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000526545.5
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp AGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGTCTCCAGGGGTACCAGGCTaGTCCCAGGAAGCTGTCCGG +
Preference number: 4 (lower is better)
Translates to: RSGFCLAVRGEAPVQRLSPGVPG*SQEAVR
Trigger: CCGGACAGCTTCCTGGGACCAGCCTGGTACCCCTGG...AGACAAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000526545.5
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp TGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTCCAGGGGTACCAGGCTaGTCCCAGGAAGCTGTCCGG +
Preference number: 4 (lower is better)
Translates to: CEVRFLLGGSRGGTSATFPGVPG*SQEAVR
Trigger: CCGGACAGCTTCCTGGGACCAGCCTGGTACCCCTGG...AAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000526545.5
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GCTCTTCCACATGTCCAGTTCCCAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCCAGGGTTGGCTGGGTTaGCTCCCGCCCAGGGGTACC +
Preference number: 4 (lower is better)
Translates to: ALPHVQFPVSCEVRFLLGQGWLG*LPPRGT
Trigger: GGTACCCCTGGGCGGGAGCCAACCCAGCCAACCCTG...GCCAAGCAGAAACCGGACCTCACAGCTGACTGGGAACTGGACATGTGGAAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp CCAGCAGCTCTTCCACATGTCCAGTTCCCAGTCAGCTGTGAGGTCCGGTTTCTGCAGGGTTGGCTGGGTTaGCTCCCGCCCAGGGGTACC +
Preference number: 4 (lower is better)
Translates to: PAALPHVQFPVSCEVRFLQGWLG*LPPRGT
Trigger: GGTACCCCTGGGCGGGAGCCAACCCAGCCAACCCTG...CAGAAACCGGACCTCACAGCTGACTGGGAACTGGACATGTGGAAGAGCTGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp AAGTCCCTGTCCTCAAGAATCTGGGAGCCTGGCCCGATCCCTGTTGGTTTCAGTGAGGGCAGGGTTGGCTaGGTTGGCTCCCGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: KSLSSRIWEPGPIPVGFSEGRVG*VGSRPG
Trigger: CCCTGGGCGGGAGCCAACCCAGCCAACCCTGCCCTC...ACTGAAACCAACAGGGATCGGGCCAGGCTCCCAGATTCTTGAGGACAGGGACTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGCTCGCAGTGGAGGGTTaGTCCCTCAGCGCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: VRSGFCLAVRGEAPVQRLLAVEG*SLSAGK
Trigger: CTTCCCAGCGCTGAGGGACCAACCCTCCACTGCGAG...CAAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000526545.5
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp TCCAGTTCCCAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGCTCGCAGTGGAGGGTTaGTCCCTCAGCGCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: SSSQSAVRSGFCLAVRGELAVEG*SLSAGK
Trigger: CTTCCCAGCGCTGAGGGACCAACCCTCCACTGCGAG...CTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGACTGGGAACTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GTGGTGTCTGGGTTCCTGGTGGCTCTGCCCACCCAACAGGTGGACAGGGCAAAGGTTGGAGGTGGTGTCTaGGTTCCTGGTGGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: VVSGFLVALPTQQVDRAKVGGGV*VPGGSA
Trigger: GGCAGAGCCACCAGGAACCCAGACACCACCTCCAAC...CTTTGCCCTGTCCACCTGTTGGGTGGGCAGAGCCACCAGGAACCCAGACACCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp ATGCCGAAGTCCCTGTCCTCAAGAATCTGGGAGCCTGGCCCGATCCCTGTTGGTCTGGTGGACAAGCCCTaGGGGCTGGCCAGCCTACAC +
Preference number: 4 (lower is better)
Translates to: MPKSLSSRIWEPGPIPVGLVDKP*GLASLH
Trigger: GTGTAGGCTGGCCAGCCCCCAGGGCTTGTCCACCAG...ACCAACAGGGATCGGGCCAGGCTCCCAGATTCTTGAGGACAGGGACTTCGGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp GCTCTTCCACATGTCCAGTTCCCAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCTCCTGCAGAAGCCGCTaGGCTCCCATGGCCCGAGCA +
Preference number: 4 (lower is better)
Translates to: ALPHVQFPVSCEVRFLLGSCRSR*APMARA
Trigger: TGCTCGGGCCATGGGAGCTCAGCGGCTTCTGCAGGA...GCCAAGCAGAAACCGGACCTCACAGCTGACTGGGAACTGGACATGTGGAAGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp GCTCAGGTAATACTGACACCCACAGGCGCTGCTCTGAGGGCCTTGCGGGGAGAAGCAATCAGCAGGAGCTaGGCCGTAGGGTGGAAAGCC +
Preference number: 4 (lower is better)
Translates to: AQVILTPTGAALRALRGEAISRS*AVGWKA
Trigger: GGCTTTCCACCCTACGGCTCAGCTCCTGCTGATTGC...TTCTCCCCGCAAGGCCCTCAGAGCAGCGCCTGTGGGTGTCAGTATTACCTGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp GCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTGCTCTGGACTGTACTaGAGGCAGACGGCCGGTTCA +
Preference number: 4 (lower is better)
Translates to: AVRSGFCLAVRGEAPVQRCSGLY*RQTAGS
Trigger: TGAACCGGCCGTCTGCCTTCAGTACAGTCCAGAGCA...ACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp GAGTTGGAGGTGGTGTCTGGGTTCCTGGTGGCTCTGCCCACCCAACAGGTGGACTGCTCTGGACTGTACTaGAGGCAGACGGCCGGTTCA +
Preference number: 4 (lower is better)
Translates to: ELEVVSGFLVALPTQQVDCSGLY*RQTAGS
Trigger: TGAACCGGCCGTCTGCCTTCAGTACAGTCCAGAGCA...GTCCACCTGTTGGGTGGGCAGAGCCACCAGGAACCCAGACACCACCTCCAACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp CAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGAGCGGGAGTTCAGACTaGGTACTGTCCGGGTCCACT +
Preference number: 4 (lower is better)
Translates to: QSAVRSGFCLAVRGEAPVSGSSD*VLSGST
Trigger: AGTGGACCCGGACAGTACTCAGTCTGAACTCCCGCT...CACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp TGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTTCTGGCTGCTGGGGATaGAAGCTGCCAGGAGCTGGC +
Preference number: 4 (lower is better)
Translates to: CEVRFLLGGSRGGTSATFSGCWG*KLPGAG
Trigger: GCCAGCTCCTGGCAGCTTTCATCCCCAGCAGCCAGA...AAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp CCAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTCAGCAGGATCCTTCGTaGGGCCAAGCCCACCATTAC +
Preference number: 4 (lower is better)
Translates to: PVSCEVRFLLGGSRGGTSQQDPS*GQAHHY
Trigger: GTAATGGTGGGCTTGGCCTCACGAAGGATCCTGCTG...ACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp TCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAAGCAGGGTTCCGGGGCTaGAGCCCAATGGCATTCATC +
Preference number: 4 (lower is better)
Translates to: SAVRSGFCLAVRGEAPVQAGFRG*SPMAFI
Trigger: GATGAATGCCATTGGGCTTCAGCCCCGGAACCCTGC...TTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000526545.5
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp GTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAAGAGTCTGGGTGCCCTaGGATGTCACTGAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: VSCEVRFLLGGSRGGTSARVWVP*DVTEVA
Trigger: TGCCACCTCAGTGACATCTCAGGGCACCCAGACTCT...TGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000526545.5
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp GAGTTGGAGGTGGTGTCTGGGTTCCTGGTGGCTCTGCCCACCCAACAGGTGGACAGAGTCTGGGTGCCCTaGGATGTCACTGAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: ELEVVSGFLVALPTQQVDRVWVP*DVTEVA
Trigger: TGCCACCTCAGTGACATCTCAGGGCACCCAGACTCT...GTCCACCTGTTGGGTGGGCAGAGCCACCAGGAACCCAGACACCACCTCCAACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp GCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTAGAGTCTGGGTGCCCTaGGATGTCACTGAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: AVRSGFCLAVRGEAPVQRRVWVP*DVTEVA
Trigger: TGCCACCTCAGTGACATCTCAGGGCACCCAGACTCT...ACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000526545.5
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp GCTCTTCCACATGTCCAGTTCCCAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCACCTTCACCAGGACCTaGGGCGGCTGTCCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: ALPHVQFPVSCEVRFLLGTFTRT*GGCPWL
Trigger: GAGCCAGGGACAGCCGCCTCAGGTCCTGGTGAAGGT...GCCAAGCAGAAACCGGACCTCACAGCTGACTGGGAACTGGACATGTGGAAGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp CAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGGTTCCCAGTCAGCTGTaGGGTCCGGTTTCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: QSAVRSGFCLAVRGEAPVVPSQL*GPVSAW
Trigger: CCAAGCAGAAACCGGACCTCACAGCTGACTGGGAAC...CACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp CCAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGTTCCCAGTCAGCTGTaGGGTCCGGTTTCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: PVSCEVRFLLGGSRGGTSVPSQL*GPVSAW
Trigger: CCAAGCAGAAACCGGACCTCACAGCTGACTGGGAAC...ACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp GTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGCCTCCTCCTGTTCCCTaGTGCAGCCAGCAGCTCTTC +
Preference number: 4 (lower is better)
Translates to: VRSGFCLAVRGEAPVQRLPPPVP*CSQQLF
Trigger: GAAGAGCTGCTGGCTGCATCAGGGAACAGGAGGAGG...CAAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp GAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGTCCCTCCTCCTGTTCCCTaGTGCAGCCAGCAGCTCTTC +
Preference number: 4 (lower is better)
Translates to: EVRFLLGGSRGGTSATFVPPPVP*CSQQLF
Trigger: GAAGAGCTGCTGGCTGCATCAGGGAACAGGAGGAGG...GACAAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp GAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGTCCTGCCCACTGTCCCTTaGCCCCATCCTGTATCAGGC +
Preference number: 4 (lower is better)
Translates to: EVRFLLGGSRGGTSATFVLPTVP*PHPVSG
Trigger: GCCTGATACAGGATGGGGTCAAGGGACAGTGGGCAG...GACAAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp GTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGCTGCCCACTGTCCCTTaGCCCCATCCTGTATCAGGC +
Preference number: 4 (lower is better)
Translates to: VRSGFCLAVRGEAPVQRLLPTVP*PHPVSG
Trigger: GCCTGATACAGGATGGGGTCAAGGGACAGTGGGCAG...CAAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp AAATGCCGAAGTCCCTGTCCTCAAGAATCTGGGAGCCTGGCCCGATCCCTGTTGTGCGTTGACGAGGCCTaGTCCGGGGGATGGAAGGGC +
Preference number: 4 (lower is better)
Translates to: KCRSPCPQESGSLARSLLCVDEA*SGGWKG
Trigger: GCCCTTCCATCCCCCGGAGCAGGCCTCGTCAACGCA...CAACAGGGATCGGGCCAGGCTCCCAGATTCTTGAGGACAGGGACTTCGGCATTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp CTGCCTCGCGGGCCTCTGTCCAGGATGATTGGCCCAGATCTGGAAGACTGTTCAGGTTGCGGAGCGTGTTaGCGGCAGTGCTGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: LPRGPLSRMIGPDLEDCSGCGAC*RQCCSG
Trigger: TCCAGAGCAGCACTGCCGGCAACACGCTCCGCAACC...TGAACAGTCTTCCAGATCTGGGCCAATCATCCTGGACAGAGGCCCGCGAGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp TCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAATGCTCAACTCCAGCCTaGTGGAGCTGGGCGTTTGGC +
Preference number: 4 (lower is better)
Translates to: SAVRSGFCLAVRGEAPVQCSTPA*WSWAFG
Trigger: GCCAAACGCCCAGCTCCAGCAGGCTGGAGTTGAGCA...TTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp AGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGGGCCAGGGAGTACACTaGCAGGATGCCTTCATCAGG +
Preference number: 4 (lower is better)
Translates to: SCEVRFLLGGSRGGTSATGQGVH*QDAFIR
Trigger: CCTGATGAAGGCATCCTGGCAGTGTACTCCCTGGCC...CGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp GTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAGGCCAGGGAGTACACTaGCAGGATGCCTTCATCAGG +
Preference number: 4 (lower is better)
Translates to: VSCEVRFLLGGSRGGTSAGQGVH*QDAFIR
Trigger: CCTGATGAAGGCATCCTGGCAGTGTACTCCCTGGCC...TGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp TGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTTCCTCCATGTGGCTCTaGTGGTTCCAGGCCGCTCGC +
Preference number: 4 (lower is better)
Translates to: CEVRFLLGGSRGGTSATFSSMWL*WFQAAR
Trigger: GCGAGCGGCCTGGAACCAGCAGAGCCACATGGAGGA...AAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp GTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGGGGCCAGAGTCTGGGTaGCCTGAGATGTCACTGAGG +
Preference number: 4 (lower is better)
Translates to: VRSGFCLAVRGEAPVQRLGPESG*PEMSLR
Trigger: CCTCAGTGACATCTCAGGGCACCCAGACTCTGGCCC...CAAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000526545.5
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp GCTCTTCCACATGTCCAGTTCCCAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGTGCTCTGCTCCCGCTaGACCACGGCTGTCATGCCG +
Preference number: 4 (lower is better)
Translates to: ALPHVQFPVSCEVRFLLGVLCSR*TTAVMP
Trigger: CGGCATGACAGCCGTGGTGCAGCGGGAGCAGAGCAC...GCCAAGCAGAAACCGGACCTCACAGCTGACTGGGAACTGGACATGTGGAAGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp CTGCCTCGCGGGCCTCTGTCCAGGATGATTGGCCCAGATCTGGAAGACTGTTCATGGAGGCCATGGTGGTaGTCTGCTCCCGCTGCACCA +
Preference number: 4 (lower is better)
Translates to: LPRGPLSRMIGPDLEDCSWRPWW*SAPAAP
Trigger: TGGTGCAGCGGGAGCAGAGCACCACCATGGCCTCCA...TGAACAGTCTTCCAGATCTGGGCCAATCATCCTGGACAGAGGCCCGCGAGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp TGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTTGGAGGCCATGGTGGTaGTCTGCTCCCGCTGCACCA +
Preference number: 4 (lower is better)
Translates to: CEVRFLLGGSRGGTSATFWRPWW*SAPAAP
Trigger: TGGTGCAGCGGGAGCAGAGCACCACCATGGCCTCCA...AAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000526545.5
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp GAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGTCGTGAGGTCCGGTTTCTaGTTGGCGGTTCGAGGGGAG +
Preference number: 4 (lower is better)
Translates to: EVRFLLGGSRGGTSATFVVRSGF*LAVRGE
Trigger: CTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCAC...GACAAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000526545.5
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp GCTCAGGTAATACTGACACCCACAGGCGCTGCTCTGAGGGCCTTGCGGGGAGAAGTGAGGTCCGGTTTCTaGTTGGCGGTTCGAGGGGAG +
Preference number: 4 (lower is better)
Translates to: AQVILTPTGAALRALRGEVRSGF*LAVRGE
Trigger: CTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCAC...TTCTCCCCGCAAGGCCCTCAGAGCAGCGCCTGTGGGTGTCAGTATTACCTGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp CTGCCTCGCGGGCCTCTGTCCAGGATGATTGGCCCAGATCTGGAAGACTGTTCATGGACAGGGCAAAGCTaGCTCGCGGGCCTCTGTCCA +
Preference number: 4 (lower is better)
Translates to: LPRGPLSRMIGPDLEDCSWTGQS*LAGLCP
Trigger: TGGACAGAGGCCCGCGAGGCAGCTTTGCCCTGTCCA...TGAACAGTCTTCCAGATCTGGGCCAATCATCCTGGACAGAGGCCCGCGAGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp GTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGGGTTCCTGGTGGCTCTaGCCACCCAACAGGTGGACA +
Preference number: 4 (lower is better)
Translates to: VRSGFCLAVRGEAPVQRLGSWWL*PPNRWT
Trigger: TGTCCACCTGTTGGGTGGGCAGAGCCACCAGGAACC...CAAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp CAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCACAGGATCCCAAGGTaGTGGCAGCACTCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: QSAVRSGFCLAVRGEAPVHRIPR*WQHSAV
Trigger: CACAGCTGAGTGCTGCCAGCACCTTGGGATCCTGTG...CACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458649.6
ENST00000534300.5
CDS-3UTR GCA 90 bp GAGTTGGAGGTGGTGTCTGGGTTCCTGGTGGCTCTGCCCACCCAACAGGTGGACGGGAAGGAACTCGAGTaGCAGAGCAGCGGCTGCAAA +
Preference number: 4 (lower is better)
Translates to: ELEVVSGFLVALPTQQVDGKELE*QSSGCK
Trigger: TTTGCAGCCGCTGCTCTGGCACTCGAGTTCCTTCCC...GTCCACCTGTTGGGTGGGCAGAGCCACCAGGAACCCAGACACCACCTCCAACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458649.6
ENST00000534300.5
CDS-3UTR GCA 90 bp GCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTGGGAAGGAACTCGAGTaGCAGAGCAGCGGCTGCAAA +
Preference number: 4 (lower is better)
Translates to: AVRSGFCLAVRGEAPVQRGKELE*QSSGCK
Trigger: TTTGCAGCCGCTGCTCTGGCACTCGAGTTCCTTCCC...ACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458649.6
ENST00000534300.5
CDS-3UTR GCA 90 bp ATGCCGAAGTCCCTGTCCTCAAGAATCTGGGAGCCTGGCCCGATCCCTGTTGGTGACGGGAGCTCGGTTTaGAGTCCAGCGAACGGGCTG +
Preference number: 4 (lower is better)
Translates to: MPKSLSSRIWEPGPIPVGDGSSV*SPANGL
Trigger: CAGCCCGTTCGCTGGACTGCAAACCGAGCTCCCGTC...ACCAACAGGGATCGGGCCAGGCTCCCAGATTCTTGAGGACAGGGACTTCGGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GGAGGTGGTGTCTGGGTTCCTGGTGGCTCTGCCCACCCAACAGGTGGACAGGGCCTCCAGTCCCAGAAGTaGATCTCATTGGCAGTGGCA +
Preference number: 4 (lower is better)
Translates to: GGGVWVPGGSAHPTGGQGLQSQK*ISLAVA
Trigger: TGCCACTGCCAATGAGATCCACTTCTGGGACTGGAG...GCCCTGTCCACCTGTTGGGTGGGCAGAGCCACCAGGAACCCAGACACCACCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GAGTTGGAGGTGGTGTCTGGGTTCCTGGTGGCTCTGCCCACCCAACAGGTGGACCCGGCAGTGCTGCTCTaGACTGTACTGAAGGCAGAC +
Preference number: 4 (lower is better)
Translates to: ELEVVSGFLVALPTQQVDPAVLL*TVLKAD
Trigger: GTCTGCCTTCAGTACAGTCCAGAGCAGCACTGCCGG...GTCCACCTGTTGGGTGGGCAGAGCCACCAGGAACCCAGACACCACCTCCAACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCACCGGCAGTGCTGCTCTaGACTGTACTGAAGGCAGAC +
Preference number: 4 (lower is better)
Translates to: VSCEVRFLLGGSRGGTSAPAVLL*TVLKAD
Trigger: GTCTGCCTTCAGTACAGTCCAGAGCAGCACTGCCGG...TGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp CTGCCTCGCGGGCCTCTGTCCAGGATGATTGGCCCAGATCTGGAAGACTGTTCATCACCGAAGAGGCACTaGTTCTGGGCGGGGGCATGG +
Preference number: 4 (lower is better)
Translates to: LPRGPLSRMIGPDLEDCSSPKRH*FWAGAW
Trigger: CCATGCCCCCGCCCAGAACCAGTGCCTCTTCGGTGA...TGAACAGTCTTCCAGATCTGGGCCAATCATCCTGGACAGAGGCCCGCGAGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp ATGCCGAAGTCCCTGTCCTCAAGAATCTGGGAGCCTGGCCCGATCCCTGTTGGTCTGGAGCTGGGCGTTTaGCCCTCAGTCCGCTCGAGA +
Preference number: 4 (lower is better)
Translates to: MPKSLSSRIWEPGPIPVGLELGV*PSVRSR
Trigger: TCTCGAGCGGACTGAGGGCCAAACGCCCAGCTCCAG...ACCAACAGGGATCGGGCCAGGCTCCCAGATTCTTGAGGACAGGGACTTCGGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp TCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACATCCGGGCATTGCGTaGAGCTCGGTGCCTGGATCT +
Preference number: 4 (lower is better)
Translates to: SAVRSGFCLAVRGEAPVQHPGIA*SSVPGS
Trigger: AGATCCAGGCACCGAGCTCCACGCAATGCCCGGATG...TTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GGAGGTGGTGTCTGGGTTCCTGGTGGCTCTGCCCACCCAACAGGTGGACAGGGCCAGCAAGAAACGCCTTaGGACAAAGCGTCCAAGCGA +
Preference number: 4 (lower is better)
Translates to: GGGVWVPGGSAHPTGGQGQQETP*DKASKR
Trigger: TCGCTTGGACGCTTTGTCCCAAGGCGTTTCTTGCTG...GCCCTGTCCACCTGTTGGGTGGGCAGAGCCACCAGGAACCCAGACACCACCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp AGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGGAGGTCTCTCCACCATaGGCCTGTTGCAGCCTGAAG +
Preference number: 4 (lower is better)
Translates to: SCEVRFLLGGSRGGTSATEVSPP*ACCSLK
Trigger: CTTCAGGCTGCAACAGGCCCATGGTGGAGAGACCTC...CGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp AGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTGTCTGTCCTCCATGTaGCTCTGCTGGTTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: SCEVRFLLGGSRGGTSATCLSSM*LCWFQA
Trigger: GGCCTGGAACCAGCAGAGCCACATGGAGGACAGACA...CGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTGAGATGTCACTGAGGTaGCAGGGTTCCGGGGCTGAA +
Preference number: 4 (lower is better)
Translates to: AVRSGFCLAVRGEAPVQREMSLR*QGSGAE
Trigger: TTCAGCCCCGGAACCCTGCCACCTCAGTGACATCTC...ACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000526545.5
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAGAGATGTCACTGAGGTaGCAGGGTTCCGGGGCTGAA +
Preference number: 4 (lower is better)
Translates to: VSCEVRFLLGGSRGGTSAEMSLR*QGSGAE
Trigger: TTCAGCCCCGGAACCCTGCCACCTCAGTGACATCTC...TGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000526545.5
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GGAGGTGGTGTCTGGGTTCCTGGTGGCTCTGCCCACCCAACAGGTGGACAGGGCGCGCATCTTCTCCACTaGCACCATACTCTGAACCCT +
Preference number: 4 (lower is better)
Translates to: GGGVWVPGGSAHPTGGQGAHLLH*HHTLNP
Trigger: AGGGTTCAGAGTATGGTGCCAGTGGAGAAGATGCGC...GCCCTGTCCACCTGTTGGGTGGGCAGAGCCACCAGGAACCCAGACACCACCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp CAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGTCCGCCATCAGCCTCTaGATCCTGCTGAGCGCATCT +
Preference number: 4 (lower is better)
Translates to: QSAVRSGFCLAVRGEAPVSAISL*ILLSAS
Trigger: AGATGCGCTCAGCAGGATCCAGAGGCTGATGGCGGA...CACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000526545.5
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp AGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGTCTTGCCGAAGCCGCCCATaGAGGCCATGGTGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: RSGFCLAVRGEAPVQRLSCRSRP*RPWWCS
Trigger: AGAGCACCACCATGGCCTCCATGGGCGGCTTCGGCA...AGACAAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000526545.5
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp CTGCCTCGCGGGCCTCTGTCCAGGATGATTGGCCCAGATCTGGAAGACTGTTCATGGGGTGAGGAGGTGTaGGCGGCACCAGGTTCAGTG +
Preference number: 4 (lower is better)
Translates to: LPRGPLSRMIGPDLEDCSWGEEV*AAPGSV
Trigger: CACTGAACCTGGTGCCGCCCACACCTCCTCACCCCA...TGAACAGTCTTCCAGATCTGGGCCAATCATCCTGGACAGAGGCCCGCGAGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp AAATCACAGACTGAGACCTCACATTCTGACCTGGAGTCTCCTCCCCTTCCCCAGGAGGGCAGGGTTGGCTaGGTTGGCTCCCGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: KSQTETSHSDLESPPLPQEGRVG*VGSRPG
Trigger: CCCTGGGCGGGAGCCAACCCAGCCAACCCTGCCCTC...CTGGGGAAGGGGAGGAGACTCCAGGTCAGAATGTGAGGTCTCAGTCTGTGATTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp TGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTCTCGCAGTGGAGGGTTaGTCCCTCAGCGCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: CEVRFLLGGSRGGTSATFLAVEG*SLSAGK
Trigger: CTTCCCAGCGCTGAGGGACCAACCCTCCACTGCGAG...AAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000526545.5
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp CTGCCTCGCGGGCCTCTGTCCAGGATGATTGGCCCAGATCTGGAAGACTGTTCACTCGCAGTGGAGGGTTaGTCCCTCAGCGCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: LPRGPLSRMIGPDLEDCSLAVEG*SLSAGK
Trigger: CTTCCCAGCGCTGAGGGACCAACCCTCCACTGCGAG...TGAACAGTCTTCCAGATCTGGGCCAATCATCCTGGACAGAGGCCCGCGAGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp AGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTGGTCAACTCGCAGTaGAGGGTTGGTCCCTCAGCG +
Preference number: 4 (lower is better)
Translates to: SCEVRFLLGGSRGGTSATLVNSQ*RVGPSA
Trigger: CGCTGAGGGACCAACCCTCCACTGCGAGTTGACCAA...CGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000526545.5
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GAGTTGGAGGTGGTGTCTGGGTTCCTGGTGGCTCTGCCCACCCAACAGGTGGACTTGGTCAACTCGCAGTaGAGGGTTGGTCCCTCAGCG +
Preference number: 4 (lower is better)
Translates to: ELEVVSGFLVALPTQQVDLVNSQ*RVGPSA
Trigger: CGCTGAGGGACCAACCCTCCACTGCGAGTTGACCAA...GTCCACCTGTTGGGTGGGCAGAGCCACCAGGAACCCAGACACCACCTCCAACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp CAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGTCTCTACCTGTTCCGTaGTTCTCCCCTAGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: QSAVRSGFCLAVRGEAPVSLPVP*FSPRAC
Trigger: GCAGGCCCTAGGGGAGAACCACGGAACAGGTAGAGA...CACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000526545.5
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTCTCTACCTGTTCCGTaGTTCTCCCCTAGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: AVRSGFCLAVRGEAPVQRSLPVP*FSPRAC
Trigger: GCAGGCCCTAGGGGAGAACCACGGAACAGGTAGAGA...ACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000526545.5
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp ATGCCGAAGTCCCTGTCCTCAAGAATCTGGGAGCCTGGCCCGATCCCTGTTGGTGGTCCGGTTTCTGCTTaGCGGTTCGAGGGGAGGCAC +
Preference number: 4 (lower is better)
Translates to: MPKSLSSRIWEPGPIPVGGPVSA*RFEGRH
Trigger: GTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACC...ACCAACAGGGATCGGGCCAGGCTCCCAGATTCTTGAGGACAGGGACTTCGGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp TCCAGTTCCCAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGTGTCTGGGTTCCTGGTaGCTCTGCCCACCCAACAGG +
Preference number: 4 (lower is better)
Translates to: SSSQSAVRSGFCLAVRGECLGSW*LCPPNR
Trigger: CCTGTTGGGTGGGCAGAGCCACCAGGAACCCAGACA...CTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGACTGGGAACTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGGTTGGAGGTGGTGTCTaGGTTCCTGGTGGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: VRSGFCLAVRGEAPVQRLVGGGV*VPGGSA
Trigger: GGCAGAGCCACCAGGAACCCAGACACCACCTCCAAC...CAAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp CCAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTCTGTCCTCAAGAATCTaGGAGCCTGGCCCGATCCCT +
Preference number: 4 (lower is better)
Translates to: PVSCEVRFLLGGSRGGTSLSSRI*EPGPIP
Trigger: AGGGATCGGGCCAGGCTCCCAGATTCTTGAGGACAG...ACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp CCAGCAGCTCTTCCACATGTCCAGTTCCCAGTCAGCTGTGAGGTCCGGTTTCTGCTGGTGGACAAGCCCTaGGGGCTGGCCAGCCTACAC +
Preference number: 4 (lower is better)
Translates to: PAALPHVQFPVSCEVRFLLVDKP*GLASLH
Trigger: GTGTAGGCTGGCCAGCCCCCAGGGCTTGTCCACCAG...CAGAAACCGGACCTCACAGCTGACTGGGAACTGGACATGTGGAAGAGCTGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp AGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGTCTTTGCGGGGAGAAGACTaGTGGACAAGCCCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: RSGFCLAVRGEAPVQRLSLRGED*WTSPGG
Trigger: GCCCCCAGGGCTTGTCCACCAGTCTTCTCCCCGCAA...AGACAAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp TGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTTTGCGGGGAGAAGACTaGTGGACAAGCCCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: CEVRFLLGGSRGGTSATFLRGED*WTSPGG
Trigger: GCCCCCAGGGCTTGTCCACCAGTCTTCTCCCCGCAA...AAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GAGATACCCACTTGTTCCTCTATTCACATTAAGCCCACAGTGTGGCTCTCCCGGTCCTGGGGCGCTCCGTaGAGGGCTGAGGGGGAGGCG +
Preference number: 4 (lower is better)
Translates to: EIPTCSSIHIKPTVWLSRSWGAP*RAEGEA
Trigger: CGCCTCCCCCTCAGCCCTCCACGGAGCGCCCCAGGA...CCGGGAGAGCCACACTGTGGGCTTAATGTGAATAGAGGAACAAGTGGGTATCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000458649.6
ENST00000534300.5
CDS-3UTR CCA 90 bp AGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGTCTTGTAAGCGGAAGTCCTaGGGCGCTCCGTGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: RSGFCLAVRGEAPVQRLSCKRKS*GAPWRA
Trigger: AGCCCTCCACGGAGCGCCCCAGGACTTCCGCTTACA...AGACAAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458649.6
ENST00000534300.5
CDS-3UTR CCA 90 bp AGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGTCTGCCTGCTCCGGGGGATaGAAGGGCTCGGTCTGTACA +
Preference number: 4 (lower is better)
Translates to: RSGFCLAVRGEAPVQRLSACSGG*KGSVCT
Trigger: TGTACAGACCGAGCCCTTCCATCCCCCGGAGCAGGC...AGACAAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000458649.6
ENST00000534300.5
CDS-3UTR TCA 90 bp CTGCCTCGCGGGCCTCTGTCCAGGATGATTGGCCCAGATCTGGAAGACTGTTCAGCAATCAGCAGGAGCTaGGCCGTAGGGTGGAAAGCC +
Preference number: 4 (lower is better)
Translates to: LPRGPLSRMIGPDLEDCSAISRS*AVGWKA
Trigger: GGCTTTCCACCCTACGGCTCAGCTCCTGCTGATTGC...TGAACAGTCTTCCAGATCTGGGCCAATCATCCTGGACAGAGGCCCGCGAGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp GCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTGTGTACACAGATGCCTaGGAGCCACCTTCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: AVRSGFCLAVRGEAPVQRVYTDA*EPPSCC
Trigger: ACAGCAGGAAGGTGGCTCTCAGGCATCTGTGTACAC...ACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp GAGTTGGAGGTGGTGTCTGGGTTCCTGGTGGCTCTGCCCACCCAACAGGTGGACGTGTACACAGATGCCTaGGAGCCACCTTCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: ELEVVSGFLVALPTQQVDVYTDA*EPPSCC
Trigger: ACAGCAGGAAGGTGGCTCTCAGGCATCTGTGTACAC...GTCCACCTGTTGGGTGGGCAGAGCCACCAGGAACCCAGACACCACCTCCAACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp GTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAGTGTACACAGATGCCTaGGAGCCACCTTCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: VSCEVRFLLGGSRGGTSAVYTDA*EPPSCC
Trigger: ACAGCAGGAAGGTGGCTCTCAGGCATCTGTGTACAC...TGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp CCAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTCCTCCCTTCTGTGGCTaGAGTGTACACAGATGCCTG +
Preference number: 4 (lower is better)
Translates to: PVSCEVRFLLGGSRGGTSPPFCG*SVHRCL
Trigger: CAGGCATCTGTGTACACTTCAGCCACAGAAGGGAGG...ACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp AGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGTCTCTCAGTTGCCAACCCTaGTGCCGGAAAACCCCTCCC +
Preference number: 4 (lower is better)
Translates to: RSGFCLAVRGEAPVQRLSLSCQP*CRKTPP
Trigger: GGGAGGGGTTTTCCGGCATCAGGGTTGGCAACTGAG...AGACAAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp CCAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTCGTCTCAGGTCACACTaGAGCTCATGGCGAATGCTG +
Preference number: 4 (lower is better)
Translates to: PVSCEVRFLLGGSRGGTSRLRSH*SSWRML
Trigger: CAGCATTCGCCATGAGCTTCAGTGTGACCTGAGACG...ACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp GAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGTCCAGCCTCCTCCTGAGTaGATCCTCCTCAGAGCTCTC +
Preference number: 4 (lower is better)
Translates to: EVRFLLGGSRGGTSATFVQPPPE*ILLRAL
Trigger: GAGAGCTCTGAGGAGGATTCACTCAGGAGGAGGCTG...GACAAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000534300.5
CDS-3UTR TCA 90 bp ATGCCGAAGTCCCTGTCCTCAAGAATCTGGGAGCCTGGCCCGATCCCTGTTGGTCCAGCAGCCTCCTCCTaGGTGAATCCTCCTCAGAGC +
Preference number: 4 (lower is better)
Translates to: MPKSLSSRIWEPGPIPVGPAASS*VNPPQS
Trigger: GCTCTGAGGAGGATTCACTCAGGAGGAGGCTGCTGG...ACCAACAGGGATCGGGCCAGGCTCCCAGATTCTTGAGGACAGGGACTTCGGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000534300.5
CDS-3UTR TCA 90 bp GCTCTTCCACATGTCCAGTTCCCAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCTCTGGCTGCTGGGGATaGAAGCTGCCAGGAGCTGGC +
Preference number: 4 (lower is better)
Translates to: ALPHVQFPVSCEVRFLLGSGCWG*KLPGAG
Trigger: GCCAGCTCCTGGCAGCTTTCATCCCCAGCAGCCAGA...GCCAAGCAGAAACCGGACCTCACAGCTGACTGGGAACTGGACATGTGGAAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp CTGCCTCGCGGGCCTCTGTCCAGGATGATTGGCCCAGATCTGGAAGACTGTTCATCGGCATTCTGCAGCTaGAGGGCCAGAGTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: LPRGPLSRMIGPDLEDCSSAFCS*RARVWV
Trigger: CACCCAGACTCTGGCCCTTCAGCTGCAGAATGCCGA...TGAACAGTCTTCCAGATCTGGGCCAATCATCCTGGACAGAGGCCCGCGAGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp TGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTTCGGCATTCTGCAGCTaGAGGGCCAGAGTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: CEVRFLLGGSRGGTSATFSAFCS*RARVWV
Trigger: CACCCAGACTCTGGCCCTTCAGCTGCAGAATGCCGA...AAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000526545.5
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp AAGTCCCTGTCCTCAAGAATCTGGGAGCCTGGCCCGATCCCTGTTGGTTTCAGTACCTTCACCAGGACCTaGGGCGGCTGTCCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: KSLSSRIWEPGPIPVGFSTFTRT*GGCPWL
Trigger: GAGCCAGGGACAGCCGCCTCAGGTCCTGGTGAAGGT...ACTGAAACCAACAGGGATCGGGCCAGGCTCCCAGATTCTTGAGGACAGGGACTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp AGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGACTGGCACCATACTCTaGACCCTCACCTTCACCAGG +
Preference number: 4 (lower is better)
Translates to: SCEVRFLLGGSRGGTSATTGTIL*TLTFTR
Trigger: CCTGGTGAAGGTGAGGGTTCAGAGTATGGTGCCAGT...CGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000526545.5
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp CAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGACTGGCACCATACTCTaGACCCTCACCTTCACCAGG +
Preference number: 4 (lower is better)
Translates to: QSAVRSGFCLAVRGEAPVTGTIL*TLTFTR
Trigger: CCTGGTGAAGGTGAGGGTTCAGAGTATGGTGCCAGT...CACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000526545.5
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp CAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCTGTCTTGTGCCCACTaGCTGATCTTCCTCTCCACC +
Preference number: 4 (lower is better)
Translates to: QSAVRSGFCLAVRGEAPVLSCAH*LIFLST
Trigger: GGTGGAGAGGAAGATCAGTCAGTGGGCACAAGACAG...CACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp GCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTACGACGAAGAGAGGCTaGAGCTCTGGAAGGCTCAGA +
Preference number: 4 (lower is better)
Translates to: AVRSGFCLAVRGEAPVQRTTKRG*SSGRLR
Trigger: TCTGAGCCTTCCAGAGCTTCAGCCTCTCTTCGTCGT...ACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp GCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTGTCCAGCGAACGGGCTaGGCCACAGGGAAAAAGAAA +
Preference number: 4 (lower is better)
Translates to: AVRSGFCLAVRGEAPVQRVQRTG*ATGKKK
Trigger: TTTCTTTTTCCCTGTGGCTCAGCCCGTTCGCTGGAC...ACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp GTGGTGTCTGGGTTCCTGGTGGCTCTGCCCACCCAACAGGTGGACAGGGCAAAGTGGAGTTGTTCTCACTaGTGTGTGGGGTGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: VVSGFLVALPTQQVDRAKWSCSH*CVGWAG
Trigger: ACCAGCCCACCCCACACAGCAGTGAGAACAACTCCA...CTTTGCCCTGTCCACCTGTTGGGTGGGCAGAGCCACCAGGAACCCAGACACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp AGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTGCGTGGAGCTCGGTaGCTGGATCTGTCACCATTG +
Preference number: 4 (lower is better)
Translates to: SCEVRFLLGGSRGGTSATLRGAR*LDLSPL
Trigger: CAATGGTGACAGATCCAGGCACCGAGCTCCACGCAA...CGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp CCAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTTTGCGTGGAGCTCGGTaGCTGGATCTGTCACCATTG +
Preference number: 4 (lower is better)
Translates to: PVSCEVRFLLGGSRGGTSLRGAR*LDLSPL
Trigger: CAATGGTGACAGATCCAGGCACCGAGCTCCACGCAA...ACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp CCAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTCAGGAGCTGGCCATCTaGAGAAATGTCACAGCTGGC +
Preference number: 4 (lower is better)
Translates to: PVSCEVRFLLGGSRGGTSQELAI*RNVTAG
Trigger: GCCAGCTGTGACATTTCTGCAGATGGCCAGCTCCTG...ACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp TCCAGTTCCCAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGTTCCAGGCCGCTCGCTaGTCCTGCTGTTGGAATGGA +
Preference number: 4 (lower is better)
Translates to: SSSQSAVRSGFCLAVRGEFQAAR*SCCWNG
Trigger: TCCATTCCAACAGCAGGAGCAGCGAGCGGCCTGGAA...CTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGACTGGGAACTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp AAATCACAGACTGAGACCTCACATTCTGACCTGGAGTCTCCTCCCCTTCCCCAGGCACCACGGCTGTCATaGCGCCCTCCGCCATCAGCC +
Preference number: 4 (lower is better)
Translates to: KSQTETSHSDLESPPLPQAPRLS*RPPPSA
Trigger: GGCTGATGGCGGAGGGCGGCATGACAGCCGTGGTGC...CTGGGGAAGGGGAGGAGACTCCAGGTCAGAATGTGAGGTCTCAGTCTGTGATTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp AAGTCCCTGTCCTCAAGAATCTGGGAGCCTGGCCCGATCCCTGTTGGTTTCAGTGTGCTCTGCTCCCGCTaGACCACGGCTGTCATGCCG +
Preference number: 4 (lower is better)
Translates to: KSLSSRIWEPGPIPVGFSVLCSR*TTAVMP
Trigger: CGGCATGACAGCCGTGGTGCAGCGGGAGCAGAGCAC...ACTGAAACCAACAGGGATCGGGCCAGGCTCCCAGATTCTTGAGGACAGGGACTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp GCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTGAGGGGAGGCACCAGTaGAACGTTTGTCTCTACCTG +
Preference number: 4 (lower is better)
Translates to: AVRSGFCLAVRGEAPVQREGRHQ*NVCLYL
Trigger: CAGGTAGAGACAAACGTTGCACTGGTGCCTCCCCTC...ACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000526545.5
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp CTGCCTCGCGGGCCTCTGTCCAGGATGATTGGCCCAGATCTGGAAGACTGTTCAGGTTCCTGGTGGCTCTaGCCACCCAACAGGTGGACA +
Preference number: 4 (lower is better)
Translates to: LPRGPLSRMIGPDLEDCSGSWWL*PPNRWT
Trigger: TGTCCACCTGTTGGGTGGGCAGAGCCACCAGGAACC...TGAACAGTCTTCCAGATCTGGGCCAATCATCCTGGACAGAGGCCCGCGAGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp TGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGGTTCCTGGTGGCTCTaGCCACCCAACAGGTGGACA +
Preference number: 4 (lower is better)
Translates to: CEVRFLLGGSRGGTSATFGSWWL*PPNRWT
Trigger: TGTCCACCTGTTGGGTGGGCAGAGCCACCAGGAACC...AAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp GCTCAGGTAATACTGACACCCACAGGCGCTGCTCTGAGGGCCTTGCGGGGAGAACACAGGATCCCAAGGTaGTGGCAGCACTCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: AQVILTPTGAALRALRGEHRIPR*WQHSAV
Trigger: CACAGCTGAGTGCTGCCAGCACCTTGGGATCCTGTG...TTCTCCCCGCAAGGCCCTCAGAGCAGCGCCTGTGGGTGTCAGTATTACCTGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458649.6
ENST00000534300.5
CDS-3UTR GCA 90 bp TCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAATGCCAGAGCAGCGGCTaGAAAGGCACAGGATCCCAA +
Preference number: 4 (lower is better)
Translates to: SAVRSGFCLAVRGEAPVQCQSSG*KGTGSQ
Trigger: TTGGGATCCTGTGCCTTTGCAGCCGCTGCTCTGGCA...TTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458649.6
ENST00000534300.5
CDS-3UTR CCA 90 bp GTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAATGTGCAGGAAATTGTaGAGGAGAGGCGTCCGGCGA +
Preference number: 4 (lower is better)
Translates to: VSCEVRFLLGGSRGGTSAMCRKL*RRGVRR
Trigger: TCGCCGGACGCCTCTCCTCCACAATTTCCTGCACAT...TGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp AGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGTCTTGGAAGGGCTCGGTCTaGATGCCAGAAGAGCGGGAG +
Preference number: 4 (lower is better)
Translates to: RSGFCLAVRGEAPVQRLSWKGSV*MPEERE
Trigger: CTCCCGCTCTTCTGGCATCCAGACCGAGCCCTTCCA...AGACAAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314845.7
ENST00000533727.5
CDS-3UTR CCA 90 bp GCTCTTCCACATGTCCAGTTCCCAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCCGGTTCAGGAGGCCCTaGTCCTGCTGCGTTGACGAG +
Preference number: 4 (lower is better)
Translates to: ALPHVQFPVSCEVRFLLGRFRRP*SCCVDE
Trigger: CTCGTCAACGCAGCAGGACCAGGGCCTCCTGAACCG...GCCAAGCAGAAACCGGACCTCACAGCTGACTGGGAACTGGACATGTGGAAGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp CCAGCAGCTCTTCCACATGTCCAGTTCCCAGTCAGCTGTGAGGTCCGGTTTCTGCGGTTCAGGAGGCCCTaGTCCTGCTGCGTTGACGAG +
Preference number: 4 (lower is better)
Translates to: PAALPHVQFPVSCEVRFLRFRRP*SCCVDE
Trigger: CTCGTCAACGCAGCAGGACCAGGGCCTCCTGAACCG...CAGAAACCGGACCTCACAGCTGACTGGGAACTGGACATGTGGAAGAGCTGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp TCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACCGGCAGTGCTGCTCTaGACTGTACTGAAGGCAGAC +
Preference number: 4 (lower is better)
Translates to: SAVRSGFCLAVRGEAPVQPAVLL*TVLKAD
Trigger: GTCTGCCTTCAGTACAGTCCAGAGCAGCACTGCCGG...TTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp TCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAAATTTCCTGGGCCTGTTaGGTCTGGGGAGCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: SAVRSGFCLAVRGEAPVQISWAC*VWGASP
Trigger: TGGGGAAGCTCCCCAGACCCAACAGGCCCAGGAAAT...TTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp TCCAGTTCCCAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGATTTCCTGGGCCTGTTaGGTCTGGGGAGCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: SSSQSAVRSGFCLAVRGEISWAC*VWGASP
Trigger: TGGGGAAGCTCCCCAGACCCAACAGGCCCAGGAAAT...CTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGACTGGGAACTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp AGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGTCTGTTCTCACTGCTGTGTaGGGTGGGCTGGTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: RSGFCLAVRGEAPVQRLSVLTAV*GGLVGR
Trigger: CCTTCCCACCAGCCCACCCCACACAGCAGTGAGAAC...AGACAAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp CCAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGGCCACGGGACAGGTTaGAGTTGTTCTCACTGCTGT +
Preference number: 4 (lower is better)
Translates to: PVSCEVRFLLGGSRGGTSGHGTG*SCSHCC
Trigger: ACAGCAGTGAGAACAACTCCAACCTGTCCCGTGGCC...ACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp AGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTCGAGAGGTGGCAACTaGCTGCCACTTGATGGCACA +
Preference number: 4 (lower is better)
Translates to: SCEVRFLLGGSRGGTSATSRGGN*LPLDGT
Trigger: TGTGCCATCAAGTGGCAGCCAGTTGCCACCTCTCGA...CGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp TGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTTCAACTCCAGCCTGCTaGAGCTGGGCGTTTGGCCCT +
Preference number: 4 (lower is better)
Translates to: CEVRFLLGGSRGGTSATFSTPAC*SWAFGP
Trigger: AGGGCCAAACGCCCAGCTCCAGCAGGCTGGAGTTGA...AAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAGTGGAGCTCGGTGCCTaGATCTGTCACCATTGTCCT +
Preference number: 4 (lower is better)
Translates to: VSCEVRFLLGGSRGGTSAVELGA*ICHHCP
Trigger: AGGACAATGGTGACAGATCCAGGCACCGAGCTCCAC...TGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
CDS-3UTR CCA 90 bp GTGGTGTCTGGGTTCCTGGTGGCTCTGCCCACCCAACAGGTGGACAGGGCAAAGGTGGAGCTCGGTGCCTaGATCTGTCACCATTGTCCT +
Preference number: 4 (lower is better)
Translates to: VVSGFLVALPTQQVDRAKVELGA*ICHHCP
Trigger: AGGACAATGGTGACAGATCCAGGCACCGAGCTCCAC...CTTTGCCCTGTCCACCTGTTGGGTGGGCAGAGCCACCAGGAACCCAGACACCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
CDS-3UTR CCA 90 bp ATGCCGAAGTCCCTGTCCTCAAGAATCTGGGAGCCTGGCCCGATCCCTGTTGGTCATCCGGGCATTGCGTaGAGCTCGGTGCCTGGATCT +
Preference number: 4 (lower is better)
Translates to: MPKSLSSRIWEPGPIPVGHPGIA*SSVPGS
Trigger: AGATCCAGGCACCGAGCTCCACGCAATGCCCGGATG...ACCAACAGGGATCGGGCCAGGCTCCCAGATTCTTGAGGACAGGGACTTCGGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GAGTTGGAGGTGGTGTCTGGGTTCCTGGTGGCTCTGCCCACCCAACAGGTGGACATTTCGCCCAGGTTATaGGGGGCCAGGGAGTACACT +
Preference number: 4 (lower is better)
Translates to: ELEVVSGFLVALPTQQVDISPRL*GAREYT
Trigger: AGTGTACTCCCTGGCCCCCCATAACCTGGGCGAAAT...GTCCACCTGTTGGGTGGGCAGAGCCACCAGGAACCCAGACACCACCTCCAACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp AGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGATTTCGCCCAGGTTATaGGGGGCCAGGGAGTACACT +
Preference number: 4 (lower is better)
Translates to: SCEVRFLLGGSRGGTSATISPRL*GAREYT
Trigger: AGTGTACTCCCTGGCCCCCCATAACCTGGGCGAAAT...CGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GGAGGTGGTGTCTGGGTTCCTGGTGGCTCTGCCCACCCAACAGGTGGACAGGGCTGGGACCAAATCGCTTaGTGTAGAGCATTTCGCCCA +
Preference number: 4 (lower is better)
Translates to: GGGVWVPGGSAHPTGGQGWDQIA*CRAFRP
Trigger: TGGGCGAAATGCTCTACACCAAGCGATTTGGTCCCA...GCCCTGTCCACCTGTTGGGTGGGCAGAGCCACCAGGAACCCAGACACCACCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp AGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGTCTCCACCATGTGCTCTGTaGAGGGGTGCAGCAGGATCC +
Preference number: 4 (lower is better)
Translates to: RSGFCLAVRGEAPVQRLSPPCAL*RGAAGS
Trigger: GGATCCTGCTGCACCCCTCCACAGAGCACATGGTGG...AGACAAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GCTCAGGTAATACTGACACCCACAGGCGCTGCTCTGAGGGCCTTGCGGGGAGAAGAGGTCTCTCCACCATaGGCCTGTTGCAGCCTGAAG +
Preference number: 4 (lower is better)
Translates to: AQVILTPTGAALRALRGEEVSPP*ACCSLK
Trigger: CTTCAGGCTGCAACAGGCCCATGGTGGAGAGACCTC...TTCTCCCCGCAAGGCCCTCAGAGCAGCGCCTGTGGGTGTCAGTATTACCTGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGGAGATGTCACTGAGGTaGCAGGGTTCCGGGGCTGAA +
Preference number: 4 (lower is better)
Translates to: VRSGFCLAVRGEAPVQRLEMSLR*QGSGAE
Trigger: TTCAGCCCCGGAACCCTGCCACCTCAGTGACATCTC...CAAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000526545.5
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp AAATGCCGAAGTCCCTGTCCTCAAGAATCTGGGAGCCTGGCCCGATCCCTGTTGTGGGGTGAGGAGGTGTaGGCGGCACCAGGTTCAGTG +
Preference number: 4 (lower is better)
Translates to: KCRSPCPQESGSLARSLLWGEEV*AAPGSV
Trigger: CACTGAACCTGGTGCCGCCCACACCTCCTCACCCCA...CAACAGGGATCGGGCCAGGCTCCCAGATTCTTGAGGACAGGGACTTCGGCATTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp AAGTCCCTGTCCTCAAGAATCTGGGAGCCTGGCCCGATCCCTGTTGGTTTCAGTCAGTTGCCCGGCCTCTaGGAGCAGTCCCCGAGAGGT +
Preference number: 4 (lower is better)
Translates to: KSLSSRIWEPGPIPVGFSQLPGL*EQSPRG
Trigger: ACCTCTCGGGGACTGCTCCCAGAGGCCGGGCAACTG...ACTGAAACCAACAGGGATCGGGCCAGGCTCCCAGATTCTTGAGGACAGGGACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp TCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAATCTCTACCTGTTCCGTaGTTCTCCCCTAGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: SAVRSGFCLAVRGEAPVQSLPVP*FSPRAC
Trigger: GCAGGCCCTAGGGGAGAACCACGGAACAGGTAGAGA...TTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000526545.5
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp TCCAGTTCCCAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGTCTCTACCTGTTCCGTaGTTCTCCCCTAGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: SSSQSAVRSGFCLAVRGESLPVP*FSPRAC
Trigger: GCAGGCCCTAGGGGAGAACCACGGAACAGGTAGAGA...CTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGACTGGGAACTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GCTCAGGTAATACTGACACCCACAGGCGCTGCTCTGAGGGCCTTGCGGGGAGAACCGGGCTCCAGATCCTaGAAGGTTCTAGTTCCCCGA +
Preference number: 4 (lower is better)
Translates to: AQVILTPTGAALRALRGEPGSRS*KVLVPR
Trigger: TCGGGGAACTAGAACCTTCCAGGATCTGGAGCCCGG...TTCTCCCCGCAAGGCCCTCAGAGCAGCGCCTGTGGGTGTCAGTATTACCTGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp AGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGATTAAGCCCACAGTGTaGCTCTCCCGGGCTCCAGAT +
Preference number: 4 (lower is better)
Translates to: SCEVRFLLGGSRGGTSATIKPTV*LSRAPD
Trigger: ATCTGGAGCCCGGGAGAGCCACACTGTGGGCTTAAT...CGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp CAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGATTAAGCCCACAGTGTaGCTCTCCCGGGCTCCAGAT +
Preference number: 4 (lower is better)
Translates to: QSAVRSGFCLAVRGEAPVIKPTV*LSRAPD
Trigger: ATCTGGAGCCCGGGAGAGCCACACTGTGGGCTTAAT...CACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GGAGGTGGTGTCTGGGTTCCTGGTGGCTCTGCCCACCCAACAGGTGGACAGGGCTCTGTCCAGGATGATTaGCCCAGATCTGGAAGACTG +
Preference number: 4 (lower is better)
Translates to: GGGVWVPGGSAHPTGGQGSVQDD*PRSGRL
Trigger: CAGTCTTCCAGATCTGGGCCAATCATCCTGGACAGA...GCCCTGTCCACCTGTTGGGTGGGCAGAGCCACCAGGAACCCAGACACCACCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp ATGCCGAAGTCCCTGTCCTCAAGAATCTGGGAGCCTGGCCCGATCCCTGTTGGTTGCCCACCCAACAGGTaGACAGGGCAAAGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: MPKSLSSRIWEPGPIPVGCPPNR*TGQSCL
Trigger: GAGGCAGCTTTGCCCTGTCCACCTGTTGGGTGGGCA...ACCAACAGGGATCGGGCCAGGCTCCCAGATTCTTGAGGACAGGGACTTCGGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp AGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGTCTGTTGGAGGTGGTGTCTaGGTTCCTGGTGGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: RSGFCLAVRGEAPVQRLSVGGGV*VPGGSA
Trigger: GGCAGAGCCACCAGGAACCCAGACACCACCTCCAAC...AGACAAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp CAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGTGGCCCGATCCCTGTTaGTTTCAGTGGGGTAAGACG +
Preference number: 4 (lower is better)
Translates to: QSAVRSGFCLAVRGEAPVWPDPC*FQWGKT
Trigger: CGTCTTACCCCACTGAAACCAACAGGGATCGGGCCA...CACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGTCCTGTCCTCAAGAATCTaGGAGCCTGGCCCGATCCCT +
Preference number: 4 (lower is better)
Translates to: EVRFLLGGSRGGTSATFVLSSRI*EPGPIP
Trigger: AGGGATCGGGCCAGGCTCCCAGATTCTTGAGGACAG...GACAAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp CCAGCAGCTCTTCCACATGTCCAGTTCCCAGTCAGCTGTGAGGTCCGGTTTCTGTTGCGGGGAGAAGACTaGTGGACAAGCCCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: PAALPHVQFPVSCEVRFLLRGED*WTSPGG
Trigger: GCCCCCAGGGCTTGTCCACCAGTCTTCTCCCCGCAA...CAGAAACCGGACCTCACAGCTGACTGGGAACTGGACATGTGGAAGAGCTGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp TCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACCTCACATTCTGACCTaGAGTCTCCTCCCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: SAVRSGFCLAVRGEAPVQPHILT*SLLPFP
Trigger: GGGGAAGGGGAGGAGACTCCAGGTCAGAATGTGAGG...TTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp ATGCCGAAGTCCCTGTCCTCAAGAATCTGGGAGCCTGGCCCGATCCCTGTTGGTAGGATCCCAAGGTGCTaGCAGCACTCAGCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: MPKSLSSRIWEPGPIPVGRIPRC*QHSAVG
Trigger: CCCCACAGCTGAGTGCTGCCAGCACCTTGGGATCCT...ACCAACAGGGATCGGGCCAGGCTCCCAGATTCTTGAGGACAGGGACTTCGGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458649.6
ENST00000534300.5
CDS-3UTR CCA 90 bp GTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGGGCTCTGCTGGTTTCTaGTCGGCAGATCACCAGGTC +
Preference number: 4 (lower is better)
Translates to: VRSGFCLAVRGEAPVQRLGSAGF*SADHQV
Trigger: GACCTGGTGATCTGCCGACCAGAAACCAGCAGAGCC...CAAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526545.5
3UTR CAA 72 bp TCCAGTTCCCAGTCAGCTGTGAGGTCCGGTTTCTGCTaGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTG +
Preference number: 4 (lower is better)
Translates to: SSSQSAVRSGFC*AVRGEAPVQRL
Trigger: CAAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGACTGGGAACTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp AAATCACAGACTGAGACCTCACATTCTGACCTGGAGTCTCCTCCCCTTCCCCAGTCCTGCAGAAGCCGCTaGGCTCCCATGGCCCGAGCA +
Preference number: 4 (lower is better)
Translates to: KSQTETSHSDLESPPLPQSCRSR*APMARA
Trigger: TGCTCGGGCCATGGGAGCTCAGCGGCTTCTGCAGGA...CTGGGGAAGGGGAGGAGACTCCAGGTCAGAATGTGAGGTCTCAGTCTGTGATTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp GTGGTGTCTGGGTTCCTGGTGGCTCTGCCCACCCAACAGGTGGACAGGGCAAAGTGGTGGGATGAAAAGTaGCACACCATGGAGTACGGC +
Preference number: 4 (lower is better)
Translates to: VVSGFLVALPTQQVDRAKWWDEK*HTMEYG
Trigger: GCCGTACTCCATGGTGTGTCACTTTTCATCCCACCA...CTTTGCCCTGTCCACCTGTTGGGTGGGCAGAGCCACCAGGAACCCAGACACCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp CAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGTGGTGGGATGAAAAGTaGCACACCATGGAGTACGGC +
Preference number: 4 (lower is better)
Translates to: QSAVRSGFCLAVRGEAPVWWDEK*HTMEYG
Trigger: GCCGTACTCCATGGTGTGTCACTTTTCATCCCACCA...CACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp CCAGCAGCTCTTCCACATGTCCAGTTCCCAGTCAGCTGTGAGGTCCGGTTTCTGGCAATCAGCAGGAGCTaGGCCGTAGGGTGGAAAGCC +
Preference number: 4 (lower is better)
Translates to: PAALPHVQFPVSCEVRFLAISRS*AVGWKA
Trigger: GGCTTTCCACCCTACGGCTCAGCTCCTGCTGATTGC...CAGAAACCGGACCTCACAGCTGACTGGGAACTGGACATGTGGAAGAGCTGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp AGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGTCTAGCGGGAGTTCAGACTaGGTACTGTCCGGGTCCACT +
Preference number: 4 (lower is better)
Translates to: RSGFCLAVRGEAPVQRLSSGSSD*VLSGST
Trigger: AGTGGACCCGGACAGTACTCAGTCTGAACTCCCGCT...AGACAAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp GTGGTGTCTGGGTTCCTGGTGGCTCTGCCCACCCAACAGGTGGACAGGGCAAAGGCAGGGTATCGTTGTTaGAGGTCAGGAGATTGTGGC +
Preference number: 4 (lower is better)
Translates to: VVSGFLVALPTQQVDRAKAGYRC*RSGDCG
Trigger: GCCACAATCTCCTGACCTTCAACAACGATACCCTGC...CTTTGCCCTGTCCACCTGTTGGGTGGGCAGAGCCACCAGGAACCCAGACACCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp AGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGGCAGGGTATCGTTGTTaGAGGTCAGGAGATTGTGGC +
Preference number: 4 (lower is better)
Translates to: SCEVRFLLGGSRGGTSATAGYRC*RSGDCG
Trigger: GCCACAATCTCCTGACCTTCAACAACGATACCCTGC...CGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp GCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTCAACTGGCTGCCACTTaGTGGCACACTCTCAAAGGA +
Preference number: 4 (lower is better)
Translates to: AVRSGFCLAVRGEAPVQRQLAAT*WHTLKG
Trigger: TCCTTTGAGAGTGTGCCATCAAGTGGCAGCCAGTTG...ACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp AAATGCCGAAGTCCCTGTCCTCAAGAATCTGGGAGCCTGGCCCGATCCCTGTTGCCAGCAGCCTCCTCCTaGGTGAATCCTCCTCAGAGC +
Preference number: 4 (lower is better)
Translates to: KCRSPCPQESGSLARSLLPAASS*VNPPQS
Trigger: GCTCTGAGGAGGATTCACTCAGGAGGAGGCTGCTGG...CAACAGGGATCGGGCCAGGCTCCCAGATTCTTGAGGACAGGGACTTCGGCATTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000534300.5
CDS-3UTR TCA 90 bp AAGTCCCTGTCCTCAAGAATCTGGGAGCCTGGCCCGATCCCTGTTGGTTTCAGTGGGCCTGTTGCAGCCTaGAGACCTGGGCCACCATGT +
Preference number: 4 (lower is better)
Translates to: KSLSSRIWEPGPIPVGFSGPVAA*RPGPPC
Trigger: ACATGGTGGCCCAGGTCTTCAGGCTGCAACAGGCCC...ACTGAAACCAACAGGGATCGGGCCAGGCTCCCAGATTCTTGAGGACAGGGACTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp TCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACTGTCTTGTGCCCACTaGCTGATCTTCCTCTCCACC +
Preference number: 4 (lower is better)
Translates to: SAVRSGFCLAVRGEAPVQLSCAH*LIFLST
Trigger: GGTGGAGAGGAAGATCAGTCAGTGGGCACAAGACAG...TTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp CCAGCAGCTCTTCCACATGTCCAGTTCCCAGTCAGCTGTGAGGTCCGGTTTCTGCTGCCCACTGTCCCTTaGCCCCATCCTGTATCAGGC +
Preference number: 4 (lower is better)
Translates to: PAALPHVQFPVSCEVRFLLPTVP*PHPVSG
Trigger: GCCTGATACAGGATGGGGTCAAGGGACAGTGGGCAG...CAGAAACCGGACCTCACAGCTGACTGGGAACTGGACATGTGGAAGAGCTGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp GTGGTGTCTGGGTTCCTGGTGGCTCTGCCCACCCAACAGGTGGACAGGGCAAAGCCCTTCTGGGAGCACTaGGGTCGTGTAACTAGGAAA +
Preference number: 4 (lower is better)
Translates to: VVSGFLVALPTQQVDRAKPFWEH*GRVTRK
Trigger: TTTCCTAGTTACACGACCTCAGTGCTCCCAGAAGGG...CTTTGCCCTGTCCACCTGTTGGGTGGGCAGAGCCACCAGGAACCCAGACACCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458649.6
CDS-3UTR GCA 90 bp TCCAGTTCCCAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCTCATGGCGAATGCTaGCCGAGTTGTTTTGGCTGG +
Preference number: 4 (lower is better)
Translates to: SSSQSAVRSGFCLAVRGEAHGEC*PSCFGW
Trigger: CCAGCCAAAACAACTCGGGCAGCATTCGCCATGAGC...CTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGACTGGGAACTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp GAGTTGGAGGTGGTGTCTGGGTTCCTGGTGGCTCTGCCCACCCAACAGGTGGACGAAGCTCATGGCGAATaGTGCCCGAGTTGTTTTGGC +
Preference number: 4 (lower is better)
Translates to: ELEVVSGFLVALPTQQVDEAHGE*CPSCFG
Trigger: GCCAAAACAACTCGGGCAGCATTCGCCATGAGCTTC...GTCCACCTGTTGGGTGGGCAGAGCCACCAGGAACCCAGACACCACCTCCAACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp GTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGTGGAGTTGTTCTCACTaGTGTGTGGGGTGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: VRSGFCLAVRGEAPVQRLWSCSH*CVGWAG
Trigger: ACCAGCCCACCCCACACAGCAGTGAGAACAACTCCA...CAAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp TCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAAGAGGTGGCAACTGGCTaGCACTTGATGGCACACTCT +
Preference number: 4 (lower is better)
Translates to: SAVRSGFCLAVRGEAPVQEVATG*HLMAHS
Trigger: AGAGTGTGCCATCAAGTGGCAGCCAGTTGCCACCTC...TTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp TCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAATTGCGTGGAGCTCGGTaGCTGGATCTGTCACCATTG +
Preference number: 4 (lower is better)
Translates to: SAVRSGFCLAVRGEAPVQLRGAR*LDLSPL
Trigger: CAATGGTGACAGATCCAGGCACCGAGCTCCACGCAA...TTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp TCCAGTTCCCAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGCAGGAGCTGGCCATCTaGAGAAATGTCACAGCTGGC +
Preference number: 4 (lower is better)
Translates to: SSSQSAVRSGFCLAVRGEQELAI*RNVTAG
Trigger: GCCAGCTGTGACATTTCTGCAGATGGCCAGCTCCTG...CTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGACTGGGAACTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp GAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGTCCAGGAGCTGGCCATCTaGAGAAATGTCACAGCTGGC +
Preference number: 4 (lower is better)
Translates to: EVRFLLGGSRGGTSATFVQELAI*RNVTAG
Trigger: GCCAGCTGTGACATTTCTGCAGATGGCCAGCTCCTG...GACAAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp TGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGGCCAGGGAGTACACTaGCAGGATGCCTTCATCAGG +
Preference number: 4 (lower is better)
Translates to: CEVRFLLGGSRGGTSATFGQGVH*QDAFIR
Trigger: CCTGATGAAGGCATCCTGGCAGTGTACTCCCTGGCC...AAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp AAGTCCCTGTCCTCAAGAATCTGGGAGCCTGGCCCGATCCCTGTTGGTTTCAGTCCACCATGGGCCTGTTaGAGCCTGAAGACCTGGGCC +
Preference number: 4 (lower is better)
Translates to: KSLSSRIWEPGPIPVGFSPPWAC*SLKTWA
Trigger: GGCCCAGGTCTTCAGGCTGCAACAGGCCCATGGTGG...ACTGAAACCAACAGGGATCGGGCCAGGCTCCCAGATTCTTGAGGACAGGGACTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp TGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTTTCCAGGCCGCTCGCTaGTCCTGCTGTTGGAATGGA +
Preference number: 4 (lower is better)
Translates to: CEVRFLLGGSRGGTSATFFQAAR*SCCWNG
Trigger: TCCATTCCAACAGCAGGAGCAGCGAGCGGCCTGGAA...AAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp ATGCCGAAGTCCCTGTCCTCAAGAATCTGGGAGCCTGGCCCGATCCCTGTTGGTTTCCAGGCCGCTCGCTaGTCCTGCTGTTGGAATGGA +
Preference number: 4 (lower is better)
Translates to: MPKSLSSRIWEPGPIPVGFQAAR*SCCWNG
Trigger: TCCATTCCAACAGCAGGAGCAGCGAGCGGCCTGGAA...ACCAACAGGGATCGGGCCAGGCTCCCAGATTCTTGAGGACAGGGACTTCGGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp CCAGCAGCTCTTCCACATGTCCAGTTCCCAGTCAGCTGTGAGGTCCGGTTTCTGGGGCCAGAGTCTGGGTaGCCTGAGATGTCACTGAGG +
Preference number: 4 (lower is better)
Translates to: PAALPHVQFPVSCEVRFLGPESG*PEMSLR
Trigger: CCTCAGTGACATCTCAGGGCACCCAGACTCTGGCCC...CAGAAACCGGACCTCACAGCTGACTGGGAACTGGACATGTGGAAGAGCTGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp ATCCCTGTTGGTTTCAGTGGGGTAAGACGACGAAGAGAGGCTGAAGCTCTGGAAGCACCACGGCTGTCATaGCGCCCTCCGCCATCAGCC +
Preference number: 4 (lower is better)
Translates to: IPVGFSGVRRRREAEALEAPRLS*RPPPSA
Trigger: GGCTGATGGCGGAGGGCGGCATGACAGCCGTGGTGC...TTCCAGAGCTTCAGCCTCTCTTCGTCGTCTTACCCCACTGAAACCAACAGGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp AAGTCCCTGTCCTCAAGAATCTGGGAGCCTGGCCCGATCCCTGTTGGTTTCAGTTGGAGGCCATGGTGGTaGTCTGCTCCCGCTGCACCA +
Preference number: 4 (lower is better)
Translates to: KSLSSRIWEPGPIPVGFSWRPWW*SAPAAP
Trigger: TGGTGCAGCGGGAGCAGAGCACCACCATGGCCTCCA...ACTGAAACCAACAGGGATCGGGCCAGGCTCCCAGATTCTTGAGGACAGGGACTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp GAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGTCGAGGGGAGGCACCAGTaGAACGTTTGTCTCTACCTG +
Preference number: 4 (lower is better)
Translates to: EVRFLLGGSRGGTSATFVEGRHQ*NVCLYL
Trigger: CAGGTAGAGACAAACGTTGCACTGGTGCCTCCCCTC...GACAAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000526545.5
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp CCAGCAGCTCTTCCACATGTCCAGTTCCCAGTCAGCTGTGAGGTCCGGTTTCTGGTGAGGTCCGGTTTCTaGTTGGCGGTTCGAGGGGAG +
Preference number: 4 (lower is better)
Translates to: PAALPHVQFPVSCEVRFLVRSGF*LAVRGE
Trigger: CTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCAC...CAGAAACCGGACCTCACAGCTGACTGGGAACTGGACATGTGGAAGAGCTGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp ATGCCGAAGTCCCTGTCCTCAAGAATCTGGGAGCCTGGCCCGATCCCTGTTGGTCCCCGAGGCAGGCCTTaGCCATTTGACTGTCTTGTG +
Preference number: 4 (lower is better)
Translates to: MPKSLSSRIWEPGPIPVGPRGRP*PFDCLV
Trigger: CACAAGACAGTCAAATGGGCAAGGCCTGCCTCGGGG...ACCAACAGGGATCGGGCCAGGCTCCCAGATTCTTGAGGACAGGGACTTCGGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp GGAGGTGGTGTCTGGGTTCCTGGTGGCTCTGCCCACCCAACAGGTGGACAGGGCTCCCCCATTAGTAAATaGCGAAGTCCCTGTCCTCAA +
Preference number: 4 (lower is better)
Translates to: GGGVWVPGGSAHPTGGQGSPISK*RSPCPQ
Trigger: TTGAGGACAGGGACTTCGGCATTTACTAATGGGGGA...GCCCTGTCCACCTGTTGGGTGGGCAGAGCCACCAGGAACCCAGACACCACCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp GAGTTGGAGGTGGTGTCTGGGTTCCTGGTGGCTCTGCCCACCCAACAGGTGGACTCTTGCACTGTGCTTTaGTCTCCCACCTGGATGCCA +
Preference number: 4 (lower is better)
Translates to: ELEVVSGFLVALPTQQVDSCTVL*SPTWMP
Trigger: TGGCATCCAGGTGGGAGAGCAAAGCACAGTGCAAGA...GTCCACCTGTTGGGTGGGCAGAGCCACCAGGAACCCAGACACCACCTCCAACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458649.6
ENST00000534300.5
CDS-3UTR CCA 90 bp GTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAGGATCTCATTGGCAGTaGCAATCAGCAGGAGCTGAG +
Preference number: 4 (lower is better)
Translates to: VSCEVRFLLGGSRGGTSAGSHWQ*QSAGAE
Trigger: CTCAGCTCCTGCTGATTGCCACTGCCAATGAGATCC...TGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp AGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGGGATCTCATTGGCAGTaGCAATCAGCAGGAGCTGAG +
Preference number: 4 (lower is better)
Translates to: SCEVRFLLGGSRGGTSATGSHWQ*QSAGAE
Trigger: CTCAGCTCCTGCTGATTGCCACTGCCAATGAGATCC...CGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp CAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCTCCAGTCCCAGAAGTaGATCTCATTGGCAGTGGCA +
Preference number: 4 (lower is better)
Translates to: QSAVRSGFCLAVRGEAPVLQSQK*ISLAVA
Trigger: TGCCACTGCCAATGAGATCCACTTCTGGGACTGGAG...CACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp CCAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTCTCCAGTCCCAGAAGTaGATCTCATTGGCAGTGGCA +
Preference number: 4 (lower is better)
Translates to: PVSCEVRFLLGGSRGGTSLQSQK*ISLAVA
Trigger: TGCCACTGCCAATGAGATCCACTTCTGGGACTGGAG...ACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp AAATCACAGACTGAGACCTCACATTCTGACCTGGAGTCTCCTCCCCTTCCCCAGGCCTGCTCCGGGGGATaGAAGGGCTCGGTCTGGATG +
Preference number: 4 (lower is better)
Translates to: KSQTETSHSDLESPPLPQACSGG*KGSVWM
Trigger: CATCCAGACCGAGCCCTTCCATCCCCCGGAGCAGGC...CTGGGGAAGGGGAGGAGACTCCAGGTCAGAATGTGAGGTCTCAGTCTGTGATTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314845.7
ENST00000533727.5
CDS-3UTR CCA 90 bp CCAGCAGCTCTTCCACATGTCCAGTTCCCAGTCAGCTGTGAGGTCCGGTTTCTGAAGAGGCACTGGTTCTaGGCGGGGGCATGGATTCCG +
Preference number: 4 (lower is better)
Translates to: PAALPHVQFPVSCEVRFLKRHWF*AGAWIP
Trigger: CGGAATCCATGCCCCCGCCCAGAACCAGTGCCTCTT...CAGAAACCGGACCTCACAGCTGACTGGGAACTGGACATGTGGAAGAGCTGCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GTGGTGTCTGGGTTCCTGGTGGCTCTGCCCACCCAACAGGTGGACAGGGCAAAGCCGAGTTGTTTTGGCTaGAGCCATTCCCTCCATCTG +
Preference number: 4 (lower is better)
Translates to: VVSGFLVALPTQQVDRAKPSCFG*SHSLHL
Trigger: CAGATGGAGGGAATGGCTCCAGCCAAAACAACTCGG...CTTTGCCCTGTCCACCTGTTGGGTGGGCAGAGCCACCAGGAACCCAGACACCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp AGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGCCGAGTTGTTTTGGCTaGAGCCATTCCCTCCATCTG +
Preference number: 4 (lower is better)
Translates to: SCEVRFLLGGSRGGTSATPSCFG*SHSLHL
Trigger: CAGATGGAGGGAATGGCTCCAGCCAAAACAACTCGG...CGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp AAATGCCGAAGTCCCTGTCCTCAAGAATCTGGGAGCCTGGCCCGATCCCTGTTGCGACAGCGATTCAGGTaGCCACGGGACAGGTTGGAG +
Preference number: 4 (lower is better)
Translates to: KCRSPCPQESGSLARSLLRQRFR*PRDRLE
Trigger: CTCCAACCTGTCCCGTGGCCACCTGAATCGCTGTCG...CAACAGGGATCGGGCCAGGCTCCCAGATTCTTGAGGACAGGGACTTCGGCATTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGTCCACTCTCAAAGGAGCTaGGGACCTGCCAAGAGGAAC +
Preference number: 4 (lower is better)
Translates to: EVRFLLGGSRGGTSATFVHSQRS*GPAKRN
Trigger: GTTCCTCTTGGCAGGTCCCCAGCTCCTTTGAGAGTG...GACAAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGTCTCGAGAGGTGGCAACTaGCTGCCACTTGATGGCACA +
Preference number: 4 (lower is better)
Translates to: EVRFLLGGSRGGTSATFVSRGGN*LPLDGT
Trigger: TGTGCCATCAAGTGGCAGCCAGTTGCCACCTCTCGA...GACAAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GCTCAGGTAATACTGACACCCACAGGCGCTGCTCTGAGGGCCTTGCGGGGAGAATCGAGAGGTGGCAACTaGCTGCCACTTGATGGCACA +
Preference number: 4 (lower is better)
Translates to: AQVILTPTGAALRALRGESRGGN*LPLDGT
Trigger: TGTGCCATCAAGTGGCAGCCAGTTGCCACCTCTCGA...TTCTCCCCGCAAGGCCCTCAGAGCAGCGCCTGTGGGTGTCAGTATTACCTGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp CCAGCAGCTCTTCCACATGTCCAGTTCCCAGTCAGCTGTGAGGTCCGGTTTCTGTCAACTCCAGCCTGCTaGAGCTGGGCGTTTGGCCCT +
Preference number: 4 (lower is better)
Translates to: PAALPHVQFPVSCEVRFLSTPAC*SWAFGP
Trigger: AGGGCCAAACGCCCAGCTCCAGCAGGCTGGAGTTGA...CAGAAACCGGACCTCACAGCTGACTGGGAACTGGACATGTGGAAGAGCTGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp CAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGTGGGTCTGGGTAAATTaGGTGCTCTCTGGATCCTGC +
Preference number: 4 (lower is better)
Translates to: QSAVRSGFCLAVRGEAPVWVWVN*VLSGSC
Trigger: GCAGGATCCAGAGAGCACCCAATTTACCCAGACCCA...CACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000534300.5
CDS-3UTR CCA 90 bp GCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTGGGTCTGGGTAAATTaGGTGCTCTCTGGATCCTGC +
Preference number: 4 (lower is better)
Translates to: AVRSGFCLAVRGEAPVQRWVWVN*VLSGSC
Trigger: GCAGGATCCAGAGAGCACCCAATTTACCCAGACCCA...ACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000534300.5
CDS-3UTR CCA 90 bp GCTCTTCCACATGTCCAGTTCCCAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCCATCCGGGCATTGCGTaGAGCTCGGTGCCTGGATCT +
Preference number: 4 (lower is better)
Translates to: ALPHVQFPVSCEVRFLLGHPGIA*SSVPGS
Trigger: AGATCCAGGCACCGAGCTCCACGCAATGCCCGGATG...GCCAAGCAGAAACCGGACCTCACAGCTGACTGGGAACTGGACATGTGGAAGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GAGTTGGAGGTGGTGTCTGGGTTCCTGGTGGCTCTGCCCACCCAACAGGTGGACCAGCAAGAAACGCCTTaGGACAAAGCGTCCAAGCGA +
Preference number: 4 (lower is better)
Translates to: ELEVVSGFLVALPTQQVDQQETP*DKASKR
Trigger: TCGCTTGGACGCTTTGTCCCAAGGCGTTTCTTGCTG...GTCCACCTGTTGGGTGGGCAGAGCCACCAGGAACCCAGACACCACCTCCAACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp CTGCCTCGCGGGCCTCTGTCCAGGATGATTGGCCCAGATCTGGAAGACTGTTCATGCAGCCTGAAGACCTaGGCCACCATGTGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: LPRGPLSRMIGPDLEDCSCSLKT*ATMCSV
Trigger: CACAGAGCACATGGTGGCCCAGGTCTTCAGGCTGCA...TGAACAGTCTTCCAGATCTGGGCCAATCATCCTGGACAGAGGCCCGCGAGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp ATCCCTGTTGGTTTCAGTGGGGTAAGACGACGAAGAGAGGCTGAAGCTCTGGAAGGCCAAGCCAAGCCCTaGCTCAGGCAGCCAACGGGC +
Preference number: 4 (lower is better)
Translates to: IPVGFSGVRRRREAEALEGQAKP*LRQPTG
Trigger: GCCCGTTGGCTGCCTGAGCCAGGGCTTGGCTTGGCC...TTCCAGAGCTTCAGCCTCTCTTCGTCGTCTTACCCCACTGAAACCAACAGGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp CCAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTCTCCTGCTGTTGGAATaGACAGTGAAGACCGTCTCG +
Preference number: 4 (lower is better)
Translates to: PVSCEVRFLLGGSRGGTSLLLLE*TVKTVS
Trigger: CGAGACGGTCTTCACTGTCCATTCCAACAGCAGGAG...ACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp ATGCCGAAGTCCCTGTCCTCAAGAATCTGGGAGCCTGGCCCGATCCCTGTTGGTTGTCTGTCCTCCATGTaGCTCTGCTGGTTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: MPKSLSSRIWEPGPIPVGCLSSM*LCWFQA
Trigger: GGCCTGGAACCAGCAGAGCCACATGGAGGACAGACA...ACCAACAGGGATCGGGCCAGGCTCCCAGATTCTTGAGGACAGGGACTTCGGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp TGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGAGATGTCACTGAGGTaGCAGGGTTCCGGGGCTGAA +
Preference number: 4 (lower is better)
Translates to: CEVRFLLGGSRGGTSATFEMSLR*QGSGAE
Trigger: TTCAGCCCCGGAACCCTGCCACCTCAGTGACATCTC...AAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000526545.5
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAGCGCATCTTCTCCACTaGCACCATACTCTGAACCCT +
Preference number: 4 (lower is better)
Translates to: VSCEVRFLLGGSRGGTSAAHLLH*HHTLNP
Trigger: AGGGTTCAGAGTATGGTGCCAGTGGAGAAGATGCGC...TGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000526545.5
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp AGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGGCGCATCTTCTCCACTaGCACCATACTCTGAACCCT +
Preference number: 4 (lower is better)
Translates to: SCEVRFLLGGSRGGTSATAHLLH*HHTLNP
Trigger: AGGGTTCAGAGTATGGTGCCAGTGGAGAAGATGCGC...CGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000526545.5
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp CTGCCTCGCGGGCCTCTGTCCAGGATGATTGGCCCAGATCTGGAAGACTGTTCATCCGCCATCAGCCTCTaGATCCTGCTGAGCGCATCT +
Preference number: 4 (lower is better)
Translates to: LPRGPLSRMIGPDLEDCSSAISL*ILLSAS
Trigger: AGATGCGCTCAGCAGGATCCAGAGGCTGATGGCGGA...TGAACAGTCTTCCAGATCTGGGCCAATCATCCTGGACAGAGGCCCGCGAGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GAGATACCCACTTGTTCCTCTATTCACATTAAGCCCACAGTGTGGCTCTCCCGGGGAAGAGGGCAGGGTTaGCTGGGTTGGCTCCCGCCC +
Preference number: 4 (lower is better)
Translates to: EIPTCSSIHIKPTVWLSRGRGQG*LGWLPP
Trigger: GGGCGGGAGCCAACCCAGCCAACCCTGCCCTCTTCC...CCGGGAGAGCCACACTGTGGGCTTAATGTGAATAGAGGAACAAGTGGGTATCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp ATCCCTGTTGGTTTCAGTGGGGTAAGACGACGAAGAGAGGCTGAAGCTCTGGAAGGAAGAGGGCAGGGTTaGCTGGGTTGGCTCCCGCCC +
Preference number: 4 (lower is better)
Translates to: IPVGFSGVRRRREAEALEGRGQG*LGWLPP
Trigger: GGGCGGGAGCCAACCCAGCCAACCCTGCCCTCTTCC...TTCCAGAGCTTCAGCCTCTCTTCGTCGTCTTACCCCACTGAAACCAACAGGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGTTGGTCCCTCAGCGCTaGGAAGGGAAACAGGAATGG +
Preference number: 4 (lower is better)
Translates to: VRSGFCLAVRGEAPVQRLLVPQR*EGKQEW
Trigger: CCATTCCTGTTTCCCTTCCCAGCGCTGAGGGACCAA...CAAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000526545.5
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp CTGCCTCGCGGGCCTCTGTCCAGGATGATTGGCCCAGATCTGGAAGACTGTTCATTGGTCAACTCGCAGTaGAGGGTTGGTCCCTCAGCG +
Preference number: 4 (lower is better)
Translates to: LPRGPLSRMIGPDLEDCSLVNSQ*RVGPSA
Trigger: CGCTGAGGGACCAACCCTCCACTGCGAGTTGACCAA...TGAACAGTCTTCCAGATCTGGGCCAATCATCCTGGACAGAGGCCCGCGAGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp AGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGTCTTTGGTCAACTCGCAGTaGAGGGTTGGTCCCTCAGCG +
Preference number: 4 (lower is better)
Translates to: RSGFCLAVRGEAPVQRLSLVNSQ*RVGPSA
Trigger: CGCTGAGGGACCAACCCTCCACTGCGAGTTGACCAA...AGACAAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000526545.5
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp TCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAAAGACTGTTCACTCTCTaGAGGCTCTCTGTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: SAVRSGFCLAVRGEAPVQRLFTL*RLSVQG
Trigger: GCCCTGGACAGAGAGCCTCCAGAGAGTGAACAGTCT...TTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GCTCTTCCACATGTCCAGTTCCCAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCTGCCCACCCAACAGGTaGACAGGGCAAAGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: ALPHVQFPVSCEVRFLLGCPPNR*TGQSCL
Trigger: GAGGCAGCTTTGCCCTGTCCACCTGTTGGGTGGGCA...GCCAAGCAGAAACCGGACCTCACAGCTGACTGGGAACTGGACATGTGGAAGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GCTCTTCCACATGTCCAGTTCCCAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCTGTCTGGGTTCCTGGTaGCTCTGCCCACCCAACAGG +
Preference number: 4 (lower is better)
Translates to: ALPHVQFPVSCEVRFLLGCLGSW*LCPPNR
Trigger: CCTGTTGGGTGGGCAGAGCCACCAGGAACCCAGACA...GCCAAGCAGAAACCGGACCTCACAGCTGACTGGGAACTGGACATGTGGAAGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp CCAGCAGCTCTTCCACATGTCCAGTTCCCAGTCAGCTGTGAGGTCCGGTTTCTGGTTGGAGGTGGTGTCTaGGTTCCTGGTGGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: PAALPHVQFPVSCEVRFLVGGGV*VPGGSA
Trigger: GGCAGAGCCACCAGGAACCCAGACACCACCTCCAAC...CAGAAACCGGACCTCACAGCTGACTGGGAACTGGACATGTGGAAGAGCTGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp TCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAATGGCCCGATCCCTGTTaGTTTCAGTGGGGTAAGACG +
Preference number: 4 (lower is better)
Translates to: SAVRSGFCLAVRGEAPVQWPDPC*FQWGKT
Trigger: CGTCTTACCCCACTGAAACCAACAGGGATCGGGCCA...TTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp CAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGAAGAATCTGGGAGCCTaGCCCGATCCCTGTTGGTTT +
Preference number: 4 (lower is better)
Translates to: QSAVRSGFCLAVRGEAPVKNLGA*PDPCWF
Trigger: AAACCAACAGGGATCGGGCCAGGCTCCCAGATTCTT...CACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GAGTTGGAGGTGGTGTCTGGGTTCCTGGTGGCTCTGCCCACCCAACAGGTGGACAAGAATCTGGGAGCCTaGCCCGATCCCTGTTGGTTT +
Preference number: 4 (lower is better)
Translates to: ELEVVSGFLVALPTQQVDKNLGA*PDPCWF
Trigger: AAACCAACAGGGATCGGGCCAGGCTCCCAGATTCTT...GTCCACCTGTTGGGTGGGCAGAGCCACCAGGAACCCAGACACCACCTCCAACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp TGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTCTGTCCTCAAGAATCTaGGAGCCTGGCCCGATCCCT +
Preference number: 4 (lower is better)
Translates to: CEVRFLLGGSRGGTSATFLSSRI*EPGPIP
Trigger: AGGGATCGGGCCAGGCTCCCAGATTCTTGAGGACAG...AAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp AAGTCCCTGTCCTCAAGAATCTGGGAGCCTGGCCCGATCCCTGTTGGTTTCAGTTGTAAGCGGAAGTCCTaGGGCGCTCCGTGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: KSLSSRIWEPGPIPVGFSCKRKS*GAPWRA
Trigger: AGCCCTCCACGGAGCGCCCCAGGACTTCCGCTTACA...ACTGAAACCAACAGGGATCGGGCCAGGCTCCCAGATTCTTGAGGACAGGGACTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458649.6
ENST00000534300.5
CDS-3UTR CCA 90 bp GCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTCCATGTGGCTCTGCTaGTTTCTGGTCGGCAGATCA +
Preference number: 4 (lower is better)
Translates to: AVRSGFCLAVRGEAPVQRSMWLC*FLVGRS
Trigger: TGATCTGCCGACCAGAAACCAGCAGAGCCACATGGA...ACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526545.5
CDS-3UTR CCA 90 bp TCCAGTTCCCAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGTCCCTCGCTGGGTCTaGGTAAATTGGGTGCTCTCT +
Preference number: 4 (lower is better)
Translates to: SSSQSAVRSGFCLAVRGEVPRWV*VNWVLS
Trigger: AGAGAGCACCCAATTTACCCAGACCCAGCGAGGGAC...CTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGACTGGGAACTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534300.5
CDS-3UTR TCA 90 bp GTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGTGGTGGGATGAAAAGTaGCACACCATGGAGTACGGC +
Preference number: 4 (lower is better)
Translates to: VRSGFCLAVRGEAPVQRLWWDEK*HTMEYG
Trigger: GCCGTACTCCATGGTGTGTCACTTTTCATCCCACCA...CAAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp GCTCTTCCACATGTCCAGTTCCCAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCAGCGGGAGTTCAGACTaGGTACTGTCCGGGTCCACT +
Preference number: 4 (lower is better)
Translates to: ALPHVQFPVSCEVRFLLGSGSSD*VLSGST
Trigger: AGTGGACCCGGACAGTACTCAGTCTGAACTCCCGCT...GCCAAGCAGAAACCGGACCTCACAGCTGACTGGGAACTGGACATGTGGAAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp CTGCCTCGCGGGCCTCTGTCCAGGATGATTGGCCCAGATCTGGAAGACTGTTCACCTCCCTTCTGTGGCTaGAGTGTACACAGATGCCTG +
Preference number: 4 (lower is better)
Translates to: LPRGPLSRMIGPDLEDCSPPFCG*SVHRCL
Trigger: CAGGCATCTGTGTACACTTCAGCCACAGAAGGGAGG...TGAACAGTCTTCCAGATCTGGGCCAATCATCCTGGACAGAGGCCCGCGAGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp AGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGTCTCGTCTCAGGTCACACTaGAGCTCATGGCGAATGCTG +
Preference number: 4 (lower is better)
Translates to: RSGFCLAVRGEAPVQRLSRLRSH*SSWRML
Trigger: CAGCATTCGCCATGAGCTTCAGTGTGACCTGAGACG...AGACAAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp GTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGGCAGGGTATCGTTGTTaGAGGTCAGGAGATTGTGGC +
Preference number: 4 (lower is better)
Translates to: VRSGFCLAVRGEAPVQRLAGYRC*RSGDCG
Trigger: GCCACAATCTCCTGACCTTCAACAACGATACCCTGC...CAAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp GAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGTCCAACTGGCTGCCACTTaGTGGCACACTCTCAAAGGA +
Preference number: 4 (lower is better)
Translates to: EVRFLLGGSRGGTSATFVQLAAT*WHTLKG
Trigger: TCCTTTGAGAGTGTGCCATCAAGTGGCAGCCAGTTG...GACAAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp GCTCAGGTAATACTGACACCCACAGGCGCTGCTCTGAGGGCCTTGCGGGGAGAATCCTCAGGCATATCCTaGTGTAAGGCCTCCTGTGAC +
Preference number: 4 (lower is better)
Translates to: AQVILTPTGAALRALRGESSGIS*CKASCD
Trigger: GTCACAGGAGGCCTTACATCAGGATATGCCTGAGGA...TTCTCCCCGCAAGGCCCTCAGAGCAGCGCCTGTGGGTGTCAGTATTACCTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp GCTCTTCCACATGTCCAGTTCCCAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCCAGCCTCCTCCTGAGTaGATCCTCCTCAGAGCTCTC +
Preference number: 4 (lower is better)
Translates to: ALPHVQFPVSCEVRFLLGQPPPE*ILLRAL
Trigger: GAGAGCTCTGAGGAGGATTCACTCAGGAGGAGGCTG...GCCAAGCAGAAACCGGACCTCACAGCTGACTGGGAACTGGACATGTGGAAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000534300.5
CDS-3UTR TCA 90 bp CCAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTCTGTTAACAGAAGAGTaGGTAGCCAAGCCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: PVSCEVRFLLGGSRGGTSLLTEE*VAKPGC
Trigger: ACAGCCTGGCTTGGCTACTCACTCTTCTGTTAACAG...ACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp GTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCACTGTTAACAGAAGAGTaGGTAGCCAAGCCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: VSCEVRFLLGGSRGGTSALLTEE*VAKPGC
Trigger: ACAGCCTGGCTTGGCTACTCACTCTTCTGTTAACAG...TGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp GCTCTTCCACATGTCCAGTTCCCAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCCAGCAGGATCCTTCGTaGGGCCAAGCCCACCATTAC +
Preference number: 4 (lower is better)
Translates to: ALPHVQFPVSCEVRFLLGQQDPS*GQAHHY
Trigger: GTAATGGTGGGCTTGGCCTCACGAAGGATCCTGCTG...GCCAAGCAGAAACCGGACCTCACAGCTGACTGGGAACTGGACATGTGGAAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp CCAGCAGCTCTTCCACATGTCCAGTTCCCAGTCAGCTGTGAGGTCCGGTTTCTGCAGCAGGATCCTTCGTaGGGCCAAGCCCACCATTAC +
Preference number: 4 (lower is better)
Translates to: PAALPHVQFPVSCEVRFLQQDPS*GQAHHY
Trigger: GTAATGGTGGGCTTGGCCTCACGAAGGATCCTGCTG...CAGAAACCGGACCTCACAGCTGACTGGGAACTGGACATGTGGAAGAGCTGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp CCAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTTGTTGGAATGGACAGTaGAGACCGTCTCGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: PVSCEVRFLLGGSRGGTSCWNGQ*RPSRSA
Trigger: AGCTGAACGAGACGGTCTTCACTGTCCATTCCAACA...ACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp GTGGTGTCTGGGTTCCTGGTGGCTCTGCCCACCCAACAGGTGGACAGGGCAAAGTGTTGGAATGGACAGTaGAGACCGTCTCGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: VVSGFLVALPTQQVDRAKCWNGQ*RPSRSA
Trigger: AGCTGAACGAGACGGTCTTCACTGTCCATTCCAACA...CTTTGCCCTGTCCACCTGTTGGGTGGGCAGAGCCACCAGGAACCCAGACACCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp GCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTGTTGGAATGGACAGTaGAGACCGTCTCGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: AVRSGFCLAVRGEAPVQRCWNGQ*RPSRSA
Trigger: AGCTGAACGAGACGGTCTTCACTGTCCATTCCAACA...ACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp CCAGCAGCTCTTCCACATGTCCAGTTCCCAGTCAGCTGTGAGGTCCGGTTTCTGAGAGTCTGGGTGCCCTaGGATGTCACTGAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: PAALPHVQFPVSCEVRFLRVWVP*DVTEVA
Trigger: TGCCACCTCAGTGACATCTCAGGGCACCCAGACTCT...CAGAAACCGGACCTCACAGCTGACTGGGAACTGGACATGTGGAAGAGCTGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp AAGTCCCTGTCCTCAAGAATCTGGGAGCCTGGCCCGATCCCTGTTGGTTTCAGTTCGGCATTCTGCAGCTaGAGGGCCAGAGTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: KSLSSRIWEPGPIPVGFSSAFCS*RARVWV
Trigger: CACCCAGACTCTGGCCCTTCAGCTGCAGAATGCCGA...ACTGAAACCAACAGGGATCGGGCCAGGCTCCCAGATTCTTGAGGACAGGGACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp AGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGTCTACTGGCACCATACTCTaGACCCTCACCTTCACCAGG +
Preference number: 4 (lower is better)
Translates to: RSGFCLAVRGEAPVQRLSTGTIL*TLTFTR
Trigger: CCTGGTGAAGGTGAGGGTTCAGAGTATGGTGCCAGT...AGACAAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000526545.5
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp AGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGTCTCTGTCTTGTGCCCACTaGCTGATCTTCCTCTCCACC +
Preference number: 4 (lower is better)
Translates to: RSGFCLAVRGEAPVQRLSLSCAH*LIFLST
Trigger: GGTGGAGAGGAAGATCAGTCAGTGGGCACAAGACAG...AGACAAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp GCTCTTCCACATGTCCAGTTCCCAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGCCTCTGTCCAGGATaGTTGGCCCAGATCTGGAAG +
Preference number: 4 (lower is better)
Translates to: ALPHVQFPVSCEVRFLLGGLCPG*LAQIWK
Trigger: CTTCCAGATCTGGGCCAATCATCCTGGACAGAGGCC...GCCAAGCAGAAACCGGACCTCACAGCTGACTGGGAACTGGACATGTGGAAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp GAGATACCCACTTGTTCCTCTATTCACATTAAGCCCACAGTGTGGCTCTCCCGGAGGCCCTGGTCCTGCTaGGTTGACGAGGCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: EIPTCSSIHIKPTVWLSRRPWSC*VDEACS
Trigger: GGAGCAGGCCTCGTCAACGCAGCAGGACCAGGGCCT...CCGGGAGAGCCACACTGTGGGCTTAATGTGAATAGAGGAACAAGTGGGTATCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp CTGCCTCGCGGGCCTCTGTCCAGGATGATTGGCCCAGATCTGGAAGACTGTTCAGCTCATGGCGAATGCTaGCCGAGTTGTTTTGGCTGG +
Preference number: 4 (lower is better)
Translates to: LPRGPLSRMIGPDLEDCSAHGEC*PSCFGW
Trigger: CCAGCCAAAACAACTCGGGCAGCATTCGCCATGAGC...TGAACAGTCTTCCAGATCTGGGCCAATCATCCTGGACAGAGGCCCGCGAGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp GAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGTCGAAGCTCATGGCGAATaGTGCCCGAGTTGTTTTGGC +
Preference number: 4 (lower is better)
Translates to: EVRFLLGGSRGGTSATFVEAHGE*CPSCFG
Trigger: GCCAAAACAACTCGGGCAGCATTCGCCATGAGCTTC...GACAAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp GTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGGAAGCTCATGGCGAATaGTGCCCGAGTTGTTTTGGC +
Preference number: 4 (lower is better)
Translates to: VRSGFCLAVRGEAPVQRLEAHGE*CPSCFG
Trigger: GCCAAAACAACTCGGGCAGCATTCGCCATGAGCTTC...CAAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp TCCAGTTCCCAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGAAGCTCATGGCGAATaGTGCCCGAGTTGTTTTGGC +
Preference number: 4 (lower is better)
Translates to: SSSQSAVRSGFCLAVRGEEAHGE*CPSCFG
Trigger: GCCAAAACAACTCGGGCAGCATTCGCCATGAGCTTC...CTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGACTGGGAACTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp TGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTTGGAGTTGTTCTCACTaGTGTGTGGGGTGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: CEVRFLLGGSRGGTSATFWSCSH*CVGWAG
Trigger: ACCAGCCCACCCCACACAGCAGTGAGAACAACTCCA...AAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp CTGCCTCGCGGGCCTCTGTCCAGGATGATTGGCCCAGATCTGGAAGACTGTTCAGAGGTGGCAACTGGCTaGCACTTGATGGCACACTCT +
Preference number: 4 (lower is better)
Translates to: LPRGPLSRMIGPDLEDCSEVATG*HLMAHS
Trigger: AGAGTGTGCCATCAAGTGGCAGCCAGTTGCCACCTC...TGAACAGTCTTCCAGATCTGGGCCAATCATCCTGGACAGAGGCCCGCGAGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp AGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGTCTGAGGTGGCAACTGGCTaGCACTTGATGGCACACTCT +
Preference number: 4 (lower is better)
Translates to: RSGFCLAVRGEAPVQRLSEVATG*HLMAHS
Trigger: AGAGTGTGCCATCAAGTGGCAGCCAGTTGCCACCTC...AGACAAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp GGAGGTGGTGTCTGGGTTCCTGGTGGCTCTGCCCACCCAACAGGTGGACAGGGCACACAGTTCCAGATCTaGTGGACTGGGTGTAAATTC +
Preference number: 4 (lower is better)
Translates to: GGGVWVPGGSAHPTGGQGTQFQI*WTGCKF
Trigger: GAATTTACACCCAGTCCAGCAGATCTGGAACTGTGT...GCCCTGTCCACCTGTTGGGTGGGCAGAGCCACCAGGAACCCAGACACCACCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp AAGTCCCTGTCCTCAAGAATCTGGGAGCCTGGCCCGATCCCTGTTGGTTTCAGTGCGTCCAAGCGAAGGTaGAGACATCCGGGCATTGCG +
Preference number: 4 (lower is better)
Translates to: KSLSSRIWEPGPIPVGFSASKRR*RHPGIA
Trigger: CGCAATGCCCGGATGTCTGCACCTTCGCTTGGACGC...ACTGAAACCAACAGGGATCGGGCCAGGCTCCCAGATTCTTGAGGACAGGGACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp GCTCTTCCACATGTCCAGTTCCCAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGCCAGGGAGTACACTaGCAGGATGCCTTCATCAGG +
Preference number: 4 (lower is better)
Translates to: ALPHVQFPVSCEVRFLLGGQGVH*QDAFIR
Trigger: CCTGATGAAGGCATCCTGGCAGTGTACTCCCTGGCC...GCCAAGCAGAAACCGGACCTCACAGCTGACTGGGAACTGGACATGTGGAAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp CAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCCACCATTACATATCTaGCCATTGGGGACAGGCTCA +
Preference number: 4 (lower is better)
Translates to: QSAVRSGFCLAVRGEAPVPPLHI*PLGTGS
Trigger: TGAGCCTGTCCCCAATGGGCAGATATGTAATGGTGG...CACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp AGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGCCACCATTACATATCTaGCCATTGGGGACAGGCTCA +
Preference number: 4 (lower is better)
Translates to: SCEVRFLLGGSRGGTSATPPLHI*PLGTGS
Trigger: TGAGCCTGTCCCCAATGGGCAGATATGTAATGGTGG...CGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp AAATCACAGACTGAGACCTCACATTCTGACCTGGAGTCTCCTCCCCTTCCCCAGACCTGGGCCACCATGTaGTCTGTGGAGGGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: KSQTETSHSDLESPPLPQTWATM*SVEGCS
Trigger: GCTGCACCCCTCCACAGAGCACATGGTGGCCCAGGT...CTGGGGAAGGGGAGGAGACTCCAGGTCAGAATGTGAGGTCTCAGTCTGTGATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp ATCCCTGTTGGTTTCAGTGGGGTAAGACGACGAAGAGAGGCTGAAGCTCTGGAAGTGCTCTGCTCCCGCTaGACCACGGCTGTCATGCCG +
Preference number: 4 (lower is better)
Translates to: IPVGFSGVRRRREAEALEVLCSR*TTAVMP
Trigger: CGGCATGACAGCCGTGGTGCAGCGGGAGCAGAGCAC...TTCCAGAGCTTCAGCCTCTCTTCGTCGTCTTACCCCACTGAAACCAACAGGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp GAGATACCCACTTGTTCCTCTATTCACATTAAGCCCACAGTGTGGCTCTCCCGGCCTCGCTCTGCCAGTTaGCCGGCCTCTGGGAGCAGT +
Preference number: 4 (lower is better)
Translates to: EIPTCSSIHIKPTVWLSRPRSAS*PASGSS
Trigger: ACTGCTCCCAGAGGCCGGGCAACTGGCAGAGCGAGG...CCGGGAGAGCCACACTGTGGGCTTAATGTGAATAGAGGAACAAGTGGGTATCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp AGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGTCTGAGGGGAGGCACCAGTaGAACGTTTGTCTCTACCTG +
Preference number: 4 (lower is better)
Translates to: RSGFCLAVRGEAPVQRLSEGRHQ*NVCLYL
Trigger: CAGGTAGAGACAAACGTTGCACTGGTGCCTCCCCTC...AGACAAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000526545.5
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp ATGCCGAAGTCCCTGTCCTCAAGAATCTGGGAGCCTGGCCCGATCCCTGTTGGTGAGGGGAGGCACCAGTaGAACGTTTGTCTCTACCTG +
Preference number: 4 (lower is better)
Translates to: MPKSLSSRIWEPGPIPVGEGRHQ*NVCLYL
Trigger: CAGGTAGAGACAAACGTTGCACTGGTGCCTCCCCTC...ACCAACAGGGATCGGGCCAGGCTCCCAGATTCTTGAGGACAGGGACTTCGGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp GCTCTTCCACATGTCCAGTTCCCAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCCCCCGAGGCAGGCCTTaGCCATTTGACTGTCTTGTG +
Preference number: 4 (lower is better)
Translates to: ALPHVQFPVSCEVRFLLGPRGRP*PFDCLV
Trigger: CACAAGACAGTCAAATGGGCAAGGCCTGCCTCGGGG...GCCAAGCAGAAACCGGACCTCACAGCTGACTGGGAACTGGACATGTGGAAGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp CAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAGAATCTTGCACTGTaGTTTGCTCTCCCACCTGGA +
Preference number: 4 (lower is better)
Translates to: QSAVRSGFCLAVRGEAPVQNLAL*FALPPG
Trigger: TCCAGGTGGGAGAGCAAAGCACAGTGCAAGATTCTG...CACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458649.6
ENST00000534300.5
CDS-3UTR GCA 90 bp AGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGTCTTCCTCCATGTGGCTCTaGTGGTTTCTGGTCGGCAGA +
Preference number: 4 (lower is better)
Translates to: RSGFCLAVRGEAPVQRLSSSMWL*WFLVGR
Trigger: TCTGCCGACCAGAAACCAGCAGAGCCACATGGAGGA...AGACAAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526545.5
CDS-3UTR GCA 90 bp CTGCCTCGCGGGCCTCTGTCCAGGATGATTGGCCCAGATCTGGAAGACTGTTCAGTCCTCATGGAAATCTaGAAGGCAGACGGGAGCTCG +
Preference number: 4 (lower is better)
Translates to: LPRGPLSRMIGPDLEDCSVLMEI*KADGSS
Trigger: CGAGCTCCCGTCTGCCTTGCAGATTTCCATGAGGAC...TGAACAGTCTTCCAGATCTGGGCCAATCATCCTGGACAGAGGCCCGCGAGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp TCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACTCCAGTCCCAGAAGTaGATCTCATTGGCAGTGGCA +
Preference number: 4 (lower is better)
Translates to: SAVRSGFCLAVRGEAPVQLQSQK*ISLAVA
Trigger: TGCCACTGCCAATGAGATCCACTTCTGGGACTGGAG...TTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp AAATCACAGACTGAGACCTCACATTCTGACCTGGAGTCTCCTCCCCTTCCCCAGTCACCGAAGAGGCACTaGTTCTGGGCGGGGGCATGG +
Preference number: 4 (lower is better)
Translates to: KSQTETSHSDLESPPLPQSPKRH*FWAGAW
Trigger: CCATGCCCCCGCCCAGAACCAGTGCCTCTTCGGTGA...CTGGGGAAGGGGAGGAGACTCCAGGTCAGAATGTGAGGTCTCAGTCTGTGATTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GAGTTGGAGGTGGTGTCTGGGTTCCTGGTGGCTCTGCCCACCCAACAGGTGGACAACCCCTCCCTTCTGTaGCTGAAGTGTACACAGATG +
Preference number: 4 (lower is better)
Translates to: ELEVVSGFLVALPTQQVDNPSLL*LKCTQM
Trigger: CATCTGTGTACACTTCAGCCACAGAAGGGAGGGGTT...GTCCACCTGTTGGGTGGGCAGAGCCACCAGGAACCCAGACACCACCTCCAACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp TCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACCGAGTTGTTTTGGCTaGAGCCATTCCCTCCATCTG +
Preference number: 4 (lower is better)
Translates to: SAVRSGFCLAVRGEAPVQPSCFG*SHSLHL
Trigger: CAGATGGAGGGAATGGCTCCAGCCAAAACAACTCGG...TTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGTTGTTGAGCATTTCCTaGGCCTGTTGGGTCTGGGGA +
Preference number: 4 (lower is better)
Translates to: VRSGFCLAVRGEAPVQRLLLSIS*ACWVWG
Trigger: TCCCCAGACCCAACAGGCCCAGGAAATGCTCAACAA...CAAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GCTCAGGTAATACTGACACCCACAGGCGCTGCTCTGAGGGCCTTGCGGGGAGAATTGTTGAGCATTTCCTaGGCCTGTTGGGTCTGGGGA +
Preference number: 4 (lower is better)
Translates to: AQVILTPTGAALRALRGELLSIS*ACWVWG
Trigger: TCCCCAGACCCAACAGGCCCAGGAAATGCTCAACAA...TTCTCCCCGCAAGGCCCTCAGAGCAGCGCCTGTGGGTGTCAGTATTACCTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGTCTTGTTGAGCATTTCCTaGGCCTGTTGGGTCTGGGGA +
Preference number: 4 (lower is better)
Translates to: EVRFLLGGSRGGTSATFVLLSIS*ACWVWG
Trigger: TCCCCAGACCCAACAGGCCCAGGAAATGCTCAACAA...GACAAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp ATGCCGAAGTCCCTGTCCTCAAGAATCTGGGAGCCTGGCCCGATCCCTGTTGGTCACTCTCAAAGGAGCTaGGGACCTGCCAAGAGGAAC +
Preference number: 4 (lower is better)
Translates to: MPKSLSSRIWEPGPIPVGHSQRS*GPAKRN
Trigger: GTTCCTCTTGGCAGGTCCCCAGCTCCTTTGAGAGTG...ACCAACAGGGATCGGGCCAGGCTCCCAGATTCTTGAGGACAGGGACTTCGGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GAGATACCCACTTGTTCCTCTATTCACATTAAGCCCACAGTGTGGCTCTCCCGGCCAGCCTGCTGGAGCTaGGCGTTTGGCCCTCAGTCC +
Preference number: 4 (lower is better)
Translates to: EIPTCSSIHIKPTVWLSRPACWS*AFGPQS
Trigger: GGACTGAGGGCCAAACGCCCAGCTCCAGCAGGCTGG...CCGGGAGAGCCACACTGTGGGCTTAATGTGAATAGAGGAACAAGTGGGTATCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp AAATGCCGAAGTCCCTGTCCTCAAGAATCTGGGAGCCTGGCCCGATCCCTGTTGCAGTGGCCTGTCTCCTaGTTAAAGGCCACCCCCACA +
Preference number: 4 (lower is better)
Translates to: KCRSPCPQESGSLARSLLQWPVS*LKATPT
Trigger: TGTGGGGGTGGCCTTTAACCAGGAGACAGGCCACTG...CAACAGGGATCGGGCCAGGCTCCCAGATTCTTGAGGACAGGGACTTCGGCATTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp CCAGCAGCTCTTCCACATGTCCAGTTCCCAGTCAGCTGTGAGGTCCGGTTTCTGCAGTGGCCTGTCTCCTaGTTAAAGGCCACCCCCACA +
Preference number: 4 (lower is better)
Translates to: PAALPHVQFPVSCEVRFLQWPVS*LKATPT
Trigger: TGTGGGGGTGGCCTTTAACCAGGAGACAGGCCACTG...CAGAAACCGGACCTCACAGCTGACTGGGAACTGGACATGTGGAAGAGCTGCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp TGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTTCAGGAAAGCCCCTCTaGCTGCTGGGGATGAAAGCT +
Preference number: 4 (lower is better)
Translates to: CEVRFLLGGSRGGTSATFSGKPL*LLGMKA
Trigger: AGCTTTCATCCCCAGCAGCCAGAGGGGCTTTCCTGA...AAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp AGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGTCTTCAGGAAAGCCCCTCTaGCTGCTGGGGATGAAAGCT +
Preference number: 4 (lower is better)
Translates to: RSGFCLAVRGEAPVQRLSSGKPL*LLGMKA
Trigger: AGCTTTCATCCCCAGCAGCCAGAGGGGCTTTCCTGA...AGACAAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp CCAGCAGCTCTTCCACATGTCCAGTTCCCAGTCAGCTGTGAGGTCCGGTTTCTGGAGGTCTCTCCACCATaGGCCTGTTGCAGCCTGAAG +
Preference number: 4 (lower is better)
Translates to: PAALPHVQFPVSCEVRFLEVSPP*ACCSLK
Trigger: CTTCAGGCTGCAACAGGCCCATGGTGGAGAGACCTC...CAGAAACCGGACCTCACAGCTGACTGGGAACTGGACATGTGGAAGAGCTGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp AAATCACAGACTGAGACCTCACATTCTGACCTGGAGTCTCCTCCCCTTCCCCAGTCCATGTGGCTCTGCTaGTTCCAGGCCGCTCGCTGC +
Preference number: 4 (lower is better)
Translates to: KSQTETSHSDLESPPLPQSMWLC*FQAARC
Trigger: GCAGCGAGCGGCCTGGAACCAGCAGAGCCACATGGA...CTGGGGAAGGGGAGGAGACTCCAGGTCAGAATGTGAGGTCTCAGTCTGTGATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GCTCAGGTAATACTGACACCCACAGGCGCTGCTCTGAGGGCCTTGCGGGGAGAAGCGCATCTTCTCCACTaGCACCATACTCTGAACCCT +
Preference number: 4 (lower is better)
Translates to: AQVILTPTGAALRALRGEAHLLH*HHTLNP
Trigger: AGGGTTCAGAGTATGGTGCCAGTGGAGAAGATGCGC...TTCTCCCCGCAAGGCCCTCAGAGCAGCGCCTGTGGGTGTCAGTATTACCTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GAGATACCCACTTGTTCCTCTATTCACATTAAGCCCACAGTGTGGCTCTCCCGGCAGTTGCCCGGCCTCTaGGAGCAGTCCCCGAGAGGT +
Preference number: 4 (lower is better)
Translates to: EIPTCSSIHIKPTVWLSRQLPGL*EQSPRG
Trigger: ACCTCTCGGGGACTGCTCCCAGAGGCCGGGCAACTG...CCGGGAGAGCCACACTGTGGGCTTAATGTGAATAGAGGAACAAGTGGGTATCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GAGATACCCACTTGTTCCTCTATTCACATTAAGCCCACAGTGTGGCTCTCCCGGCCAGGGGTACCAGGCTaGTCCCAGGAAGCTGTCCGG +
Preference number: 4 (lower is better)
Translates to: EIPTCSSIHIKPTVWLSRPGVPG*SQEAVR
Trigger: CCGGACAGCTTCCTGGGACCAGCCTGGTACCCCTGG...CCGGGAGAGCCACACTGTGGGCTTAATGTGAATAGAGGAACAAGTGGGTATCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp ATGCCGAAGTCCCTGTCCTCAAGAATCTGGGAGCCTGGCCCGATCCCTGTTGGTTTGGTCCCTCAGCGCTaGGAAGGGAAACAGGAATGG +
Preference number: 4 (lower is better)
Translates to: MPKSLSSRIWEPGPIPVGLVPQR*EGKQEW
Trigger: CCATTCCTGTTTCCCTTCCCAGCGCTGAGGGACCAA...ACCAACAGGGATCGGGCCAGGCTCCCAGATTCTTGAGGACAGGGACTTCGGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp AGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGTCTTTGGTCCCTCAGCGCTaGGAAGGGAAACAGGAATGG +
Preference number: 4 (lower is better)
Translates to: RSGFCLAVRGEAPVQRLSLVPQR*EGKQEW
Trigger: CCATTCCTGTTTCCCTTCCCAGCGCTGAGGGACCAA...AGACAAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000526545.5
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GAGTTGGAGGTGGTGTCTGGGTTCCTGGTGGCTCTGCCCACCCAACAGGTGGACGAAGGTGGTTGTTATTaGTCAACTCGCAGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: ELEVVSGFLVALPTQQVDEGGCY*STRSGG
Trigger: CCCTCCACTGCGAGTTGACCAATAACAACCACCTTC...GTCCACCTGTTGGGTGGGCAGAGCCACCAGGAACCCAGACACCACCTCCAACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp AGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGGAAGGTGGTTGTTATTaGTCAACTCGCAGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: SCEVRFLLGGSRGGTSATEGGCY*STRSGG
Trigger: CCCTCCACTGCGAGTTGACCAATAACAACCACCTTC...CGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000526545.5
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp AAATGCCGAAGTCCCTGTCCTCAAGAATCTGGGAGCCTGGCCCGATCCCTGTTGTCTCTACCTGTTCCGTaGTTCTCCCCTAGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: KCRSPCPQESGSLARSLLSLPVP*FSPRAC
Trigger: GCAGGCCCTAGGGGAGAACCACGGAACAGGTAGAGA...CAACAGGGATCGGGCCAGGCTCCCAGATTCTTGAGGACAGGGACTTCGGCATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp CCAGCAGCTCTTCCACATGTCCAGTTCCCAGTCAGCTGTGAGGTCCGGTTTCTGCCGGGCTCCAGATCCTaGAAGGTTCTAGTTCCCCGA +
Preference number: 4 (lower is better)
Translates to: PAALPHVQFPVSCEVRFLPGSRS*KVLVPR
Trigger: TCGGGGAACTAGAACCTTCCAGGATCTGGAGCCCGG...CAGAAACCGGACCTCACAGCTGACTGGGAACTGGACATGTGGAAGAGCTGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp CAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGGTTACTAGGAGAAAGTaGGGTGCCTGGCAGAGATAC +
Preference number: 4 (lower is better)
Translates to: QSAVRSGFCLAVRGEAPVVTRRK*GAWQRY
Trigger: GTATCTCTGCCAGGCACCCCACTTTCTCCTAGTAAC...CACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp TGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTAGACTGTTCACTCTCTaGAGGCTCTCTGTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: CEVRFLLGGSRGGTSATFRLFTL*RLSVQG
Trigger: GCCCTGGACAGAGAGCCTCCAGAGAGTGAACAGTCT...AAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp CTGCCTCGCGGGCCTCTGTCCAGGATGATTGGCCCAGATCTGGAAGACTGTTCAAGACTGTTCACTCTCTaGAGGCTCTCTGTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: LPRGPLSRMIGPDLEDCSRLFTL*RLSVQG
Trigger: GCCCTGGACAGAGAGCCTCCAGAGAGTGAACAGTCT...TGAACAGTCTTCCAGATCTGGGCCAATCATCCTGGACAGAGGCCCGCGAGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp CAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCCCTGTTGGTTTCAGTaGGGTAAGACGACGAAGAGA +
Preference number: 4 (lower is better)
Translates to: QSAVRSGFCLAVRGEAPVPCWFQ*GKTTKR
Trigger: TCTCTTCGTCGTCTTACCCCACTGAAACCAACAGGG...CACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp AGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGTCTTGGCCCGATCCCTGTTaGTTTCAGTGGGGTAAGACG +
Preference number: 4 (lower is better)
Translates to: RSGFCLAVRGEAPVQRLSWPDPC*FQWGKT
Trigger: CGTCTTACCCCACTGAAACCAACAGGGATCGGGCCA...AGACAAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GCTCAGGTAATACTGACACCCACAGGCGCTGCTCTGAGGGCCTTGCGGGGAGAAAAGAATCTGGGAGCCTaGCCCGATCCCTGTTGGTTT +
Preference number: 4 (lower is better)
Translates to: AQVILTPTGAALRALRGEKNLGA*PDPCWF
Trigger: AAACCAACAGGGATCGGGCCAGGCTCCCAGATTCTT...TTCTCCCCGCAAGGCCCTCAGAGCAGCGCCTGTGGGTGTCAGTATTACCTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp AAATGCCGAAGTCCCTGTCCTCAAGAATCTGGGAGCCTGGCCCGATCCCTGTTGCTGTCCTCAAGAATCTaGGAGCCTGGCCCGATCCCT +
Preference number: 4 (lower is better)
Translates to: KCRSPCPQESGSLARSLLLSSRI*EPGPIP
Trigger: AGGGATCGGGCCAGGCTCCCAGATTCTTGAGGACAG...CAACAGGGATCGGGCCAGGCTCCCAGATTCTTGAGGACAGGGACTTCGGCATTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp ATCCCTGTTGGTTTCAGTGGGGTAAGACGACGAAGAGAGGCTGAAGCTCTGGAACTGGTGGACAAGCCCTaGGGGCTGGCCAGCCTACAC +
Preference number: 4 (lower is better)
Translates to: IPVGFSGVRRRREAEALELVDKP*GLASLH
Trigger: GTGTAGGCTGGCCAGCCCCCAGGGCTTGTCCACCAG...TTCCAGAGCTTCAGCCTCTCTTCGTCGTCTTACCCCACTGAAACCAACAGGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp AAATGCCGAAGTCCCTGTCCTCAAGAATCTGGGAGCCTGGCCCGATCCCTGTTGCCTCACATTCTGACCTaGAGTCTCCTCCCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: KCRSPCPQESGSLARSLLPHILT*SLLPFP
Trigger: GGGGAAGGGGAGGAGACTCCAGGTCAGAATGTGAGG...CAACAGGGATCGGGCCAGGCTCCCAGATTCTTGAGGACAGGGACTTCGGCATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp AAGTCCCTGTCCTCAAGAATCTGGGAGCCTGGCCCGATCCCTGTTGGTTTCAGTAGGATCCCAAGGTGCTaGCAGCACTCAGCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: KSLSSRIWEPGPIPVGFSRIPRC*QHSAVG
Trigger: CCCCACAGCTGAGTGCTGCCAGCACCTTGGGATCCT...ACTGAAACCAACAGGGATCGGGCCAGGCTCCCAGATTCTTGAGGACAGGGACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458649.6
ENST00000534300.5
CDS-3UTR TCA 90 bp AGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGCTGAAGCAGCTAAAATaGGGCCATACAGGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: SCEVRFLLGGSRGGTSATLKQLK*GHTGPC
Trigger: ACAAGGACCTGTATGGCCTCATTTTAGCTGCTTCAG...CGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp GCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTCTGAAGCAGCTAAAATaGGGCCATACAGGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: AVRSGFCLAVRGEAPVQRLKQLK*GHTGPC
Trigger: ACAAGGACCTGTATGGCCTCATTTTAGCTGCTTCAG...ACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp CCAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTTGTCCAATCAGGGAATaGACACACTTGCCAGTCTTC +
Preference number: 4 (lower is better)
Translates to: PVSCEVRFLLGGSRGGTSCPIRE*THLPVF
Trigger: GAAGACTGGCAAGTGTGTTCATTCCCTGATTGGACA...ACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp GAGTTGGAGGTGGTGTCTGGGTTCCTGGTGGCTCTGCCCACCCAACAGGTGGACTGTCCAATCAGGGAATaGACACACTTGCCAGTCTTC +
Preference number: 4 (lower is better)
Translates to: ELEVVSGFLVALPTQQVDCPIRE*THLPVF
Trigger: GAAGACTGGCAAGTGTGTTCATTCCCTGATTGGACA...GTCCACCTGTTGGGTGGGCAGAGCCACCAGGAACCCAGACACCACCTCCAACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp GCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTGTCCAATCAGGGAATaGACACACTTGCCAGTCTTC +
Preference number: 4 (lower is better)
Translates to: AVRSGFCLAVRGEAPVQRCPIRE*THLPVF
Trigger: GAAGACTGGCAAGTGTGTTCATTCCCTGATTGGACA...ACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp AGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGTCTTGGTGGGATGAAAAGTaGCACACCATGGAGTACGGC +
Preference number: 4 (lower is better)
Translates to: RSGFCLAVRGEAPVQRLSWWDEK*HTMEYG
Trigger: GCCGTACTCCATGGTGTGTCACTTTTCATCCCACCA...AGACAAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp GTGGTGTCTGGGTTCCTGGTGGCTCTGCCCACCCAACAGGTGGACAGGGCAAAGCATTGTTGCTATCTGTaGACCAGCTTTCACTGCCAC +
Preference number: 4 (lower is better)
Translates to: VVSGFLVALPTQQVDRAKHCCYL*TSFHCH
Trigger: GTGGCAGTGAAAGCTGGTTCACAGATAGCAACAATG...CTTTGCCCTGTCCACCTGTTGGGTGGGCAGAGCCACCAGGAACCCAGACACCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp AAGTCCCTGTCCTCAAGAATCTGGGAGCCTGGCCCGATCCCTGTTGGTTTCAGTTGCTCTGGACTGTACTaGAGGCAGACGGCCGGTTCA +
Preference number: 4 (lower is better)
Translates to: KSLSSRIWEPGPIPVGFSCSGLY*RQTAGS
Trigger: TGAACCGGCCGTCTGCCTTCAGTACAGTCCAGAGCA...ACTGAAACCAACAGGGATCGGGCCAGGCTCCCAGATTCTTGAGGACAGGGACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp TCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAAGGAGCTATTTCTCGGTaGTACCTAGAAGGGTGGCTA +
Preference number: 4 (lower is better)
Translates to: SAVRSGFCLAVRGEAPVQGAISR*YLEGWL
Trigger: TAGCCACCCTTCTAGGTATCACCGAGAAATAGCTCC...TTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp CTGCCTCGCGGGCCTCTGTCCAGGATGATTGGCCCAGATCTGGAAGACTGTTCACAACTGGCTGCCACTTaGTGGCACACTCTCAAAGGA +
Preference number: 4 (lower is better)
Translates to: LPRGPLSRMIGPDLEDCSQLAAT*WHTLKG
Trigger: TCCTTTGAGAGTGTGCCATCAAGTGGCAGCCAGTTG...TGAACAGTCTTCCAGATCTGGGCCAATCATCCTGGACAGAGGCCCGCGAGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp AGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGTCTTCCTCAGGCATATCCTaGTGTAAGGCCTCCTGTGAC +
Preference number: 4 (lower is better)
Translates to: RSGFCLAVRGEAPVQRLSSSGIS*CKASCD
Trigger: GTCACAGGAGGCCTTACATCAGGATATGCCTGAGGA...AGACAAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp GCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTAACGGGATAATGAAATaGGGGAAGATTCCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: AVRSGFCLAVRGEAPVQRNGIMK*GKIPAA
Trigger: GGCTGCTGGAATCTTCCCTCATTTCATTATCCCGTT...ACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000534300.5
CDS-3UTR TCA 90 bp GCTCAGGTAATACTGACACCCACAGGCGCTGCTCTGAGGGCCTTGCGGGGAGAACTGTTAACAGAAGAGTaGGTAGCCAAGCCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: AQVILTPTGAALRALRGELLTEE*VAKPGC
Trigger: ACAGCCTGGCTTGGCTACTCACTCTTCTGTTAACAG...TTCTCCCCGCAAGGCCCTCAGAGCAGCGCCTGTGGGTGTCAGTATTACCTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp AAATCACAGACTGAGACCTCACATTCTGACCTGGAGTCTCCTCCCCTTCCCCAGCCTCCTCCTGTTCCCTaGTGCAGCCAGCAGCTCTTC +
Preference number: 4 (lower is better)
Translates to: KSQTETSHSDLESPPLPQPPPVP*CSQQLF
Trigger: GAAGAGCTGCTGGCTGCATCAGGGAACAGGAGGAGG...CTGGGGAAGGGGAGGAGACTCCAGGTCAGAATGTGAGGTCTCAGTCTGTGATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp GAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGTCGCAGTTCTACTCTCTTaGCCTCCCATTTCATCCACC +
Preference number: 4 (lower is better)
Translates to: EVRFLLGGSRGGTSATFVAVLLS*PPISST
Trigger: GGTGGATGAAATGGGAGGGCAAGAGAGTAGAACTGC...GACAAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp CCAGCAGCTCTTCCACATGTCCAGTTCCCAGTCAGCTGTGAGGTCCGGTTTCTGGCTCATGGCGAATGCTaGCCGAGTTGTTTTGGCTGG +
Preference number: 4 (lower is better)
Translates to: PAALPHVQFPVSCEVRFLAHGEC*PSCFGW
Trigger: CCAGCCAAAACAACTCGGGCAGCATTCGCCATGAGC...CAGAAACCGGACCTCACAGCTGACTGGGAACTGGACATGTGGAAGAGCTGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp ATCCCTGTTGGTTTCAGTGGGGTAAGACGACGAAGAGAGGCTGAAGCTCTGGAACAGACATCCGGGCATTaGGTGGAGCTCGGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: IPVGFSGVRRRREAEALEQTSGH*VELGAW
Trigger: CCAGGCACCGAGCTCCACGCAATGCCCGGATGTCTG...TTCCAGAGCTTCAGCCTCTCTTCGTCGTCTTACCCCACTGAAACCAACAGGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp GAGATACCCACTTGTTCCTCTATTCACATTAAGCCCACAGTGTGGCTCTCCCGGCAGACATCCGGGCATTaGGTGGAGCTCGGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: EIPTCSSIHIKPTVWLSRQTSGH*VELGAW
Trigger: CCAGGCACCGAGCTCCACGCAATGCCCGGATGTCTG...CCGGGAGAGCCACACTGTGGGCTTAATGTGAATAGAGGAACAAGTGGGTATCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp AGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGTCTAGTACACTGCCAGGATaGCTTCATCAGGAAAGCCCC +
Preference number: 4 (lower is better)
Translates to: RSGFCLAVRGEAPVQRLSSTLPG*LHQESP
Trigger: GGGGCTTTCCTGATGAAGGCATCCTGGCAGTGTACT...AGACAAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp GAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGTCCCACCATTACATATCTaGCCATTGGGGACAGGCTCA +
Preference number: 4 (lower is better)
Translates to: EVRFLLGGSRGGTSATFVPPLHI*PLGTGS
Trigger: TGAGCCTGTCCCCAATGGGCAGATATGTAATGGTGG...GACAAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp TCCAGTTCCCAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGCCACCATTACATATCTaGCCATTGGGGACAGGCTCA +
Preference number: 4 (lower is better)
Translates to: SSSQSAVRSGFCLAVRGEPPLHI*PLGTGS
Trigger: TGAGCCTGTCCCCAATGGGCAGATATGTAATGGTGG...CTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGACTGGGAACTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp GAGATACCCACTTGTTCCTCTATTCACATTAAGCCCACAGTGTGGCTCTCCCGGCCACCATGGGCCTGTTaGAGCCTGAAGACCTGGGCC +
Preference number: 4 (lower is better)
Translates to: EIPTCSSIHIKPTVWLSRPPWAC*SLKTWA
Trigger: GGCCCAGGTCTTCAGGCTGCAACAGGCCCATGGTGG...CCGGGAGAGCCACACTGTGGGCTTAATGTGAATAGAGGAACAAGTGGGTATCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp ATCCCTGTTGGTTTCAGTGGGGTAAGACGACGAAGAGAGGCTGAAGCTCTGGAACGGCACCAGGTTCAGTaGCCGTCTGAGAGCTGCGGT +
Preference number: 4 (lower is better)
Translates to: IPVGFSGVRRRREAEALERHQVQ*PSESCG
Trigger: ACCGCAGCTCTCAGACGGGCACTGAACCTGGTGCCG...TTCCAGAGCTTCAGCCTCTCTTCGTCGTCTTACCCCACTGAAACCAACAGGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp GAGATACCCACTTGTTCCTCTATTCACATTAAGCCCACAGTGTGGCTCTCCCGGTGGACAGGGCAAAGCTaGCTCGCGGGCCTCTGTCCA +
Preference number: 4 (lower is better)
Translates to: EIPTCSSIHIKPTVWLSRWTGQS*LAGLCP
Trigger: TGGACAGAGGCCCGCGAGGCAGCTTTGCCCTGTCCA...CCGGGAGAGCCACACTGTGGGCTTAATGTGAATAGAGGAACAAGTGGGTATCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp GTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCATCCCCCATTAGTAAATaGCGAAGTCCCTGTCCTCAA +
Preference number: 4 (lower is better)
Translates to: VSCEVRFLLGGSRGGTSASPISK*RSPCPQ
Trigger: TTGAGGACAGGGACTTCGGCATTTACTAATGGGGGA...TGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp GCTCTTCCACATGTCCAGTTCCCAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGTCCTCATGGAAATCTaGAAGGCAGACGGGAGCTCG +
Preference number: 4 (lower is better)
Translates to: ALPHVQFPVSCEVRFLLGVLMEI*KADGSS
Trigger: CGAGCTCCCGTCTGCCTTGCAGATTTCCATGAGGAC...GCCAAGCAGAAACCGGACCTCACAGCTGACTGGGAACTGGACATGTGGAAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GCTCTTCCACATGTCCAGTTCCCAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCCTGGGACAACCTTCATaGCGCTCAGTAGCCACTGTC +
Preference number: 4 (lower is better)
Translates to: ALPHVQFPVSCEVRFLLGLGQPS*RSVATV
Trigger: GACAGTGGCTACTGAGCGCCATGAAGGTTGTCCCAG...GCCAAGCAGAAACCGGACCTCACAGCTGACTGGGAACTGGACATGTGGAAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GAGTTGGAGGTGGTGTCTGGGTTCCTGGTGGCTCTGCCCACCCAACAGGTGGACGACAGCATTCTTTTCTaGGACAACCTTCATGGCGCT +
Preference number: 4 (lower is better)
Translates to: ELEVVSGFLVALPTQQVDDSILF*DNLHGA
Trigger: AGCGCCATGAAGGTTGTCCCAGAAAAGAATGCTGTC...GTCCACCTGTTGGGTGGGCAGAGCCACCAGGAACCCAGACACCACCTCCAACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp CCAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTAAAAGTGACACACCATaGAGTACGGCGGTGTCCAAT +
Preference number: 4 (lower is better)
Translates to: PVSCEVRFLLGGSRGGTSKSDTP*STAVSN
Trigger: ATTGGACACCGCCGTACTCCATGGTGTGTCACTTTT...ACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GTGGTGTCTGGGTTCCTGGTGGCTCTGCCCACCCAACAGGTGGACAGGGCAAAGAAAAGTGACACACCATaGAGTACGGCGGTGTCCAAT +
Preference number: 4 (lower is better)
Translates to: VVSGFLVALPTQQVDRAKKSDTP*STAVSN
Trigger: ATTGGACACCGCCGTACTCCATGGTGTGTCACTTTT...CTTTGCCCTGTCCACCTGTTGGGTGGGCAGAGCCACCAGGAACCCAGACACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp AAATCACAGACTGAGACCTCACATTCTGACCTGGAGTCTCCTCCCCTTCCCCAGAAGAGGCACTGGTTCTaGGCGGGGGCATGGATTCCG +
Preference number: 4 (lower is better)
Translates to: KSQTETSHSDLESPPLPQKRHWF*AGAWIP
Trigger: CGGAATCCATGCCCCCGCCCAGAACCAGTGCCTCTT...CTGGGGAAGGGGAGGAGACTCCAGGTCAGAATGTGAGGTCTCAGTCTGTGATTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp AAGTCCCTGTCCTCAAGAATCTGGGAGCCTGGCCCGATCCCTGTTGGTTTCAGTATTTCCTGGGCCTGTTaGGTCTGGGGAGCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: KSLSSRIWEPGPIPVGFSISWAC*VWGASP
Trigger: TGGGGAAGCTCCCCAGACCCAACAGGCCCAGGAAAT...ACTGAAACCAACAGGGATCGGGCCAGGCTCCCAGATTCTTGAGGACAGGGACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp AGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGTCTCTGGTGGGAAGGGCCTaGCCTCTCAGATTCAATGTT +
Preference number: 4 (lower is better)
Translates to: RSGFCLAVRGEAPVQRLSLVGRA*PLRFNV
Trigger: AACATTGAATCTGAGAGGCCAGGCCCTTCCCACCAG...AGACAAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp AAATGCCGAAGTCCCTGTCCTCAAGAATCTGGGAGCCTGGCCCGATCCCTGTTGGGCCACGGGACAGGTTaGAGTTGTTCTCACTGCTGT +
Preference number: 4 (lower is better)
Translates to: KCRSPCPQESGSLARSLLGHGTG*SCSHCC
Trigger: ACAGCAGTGAGAACAACTCCAACCTGTCCCGTGGCC...CAACAGGGATCGGGCCAGGCTCCCAGATTCTTGAGGACAGGGACTTCGGCATTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GCTCAGGTAATACTGACACCCACAGGCGCTGCTCTGAGGGCCTTGCGGGGAGAAAAGGTCAGGAGATTGTaGCAAGCACGACAGCGATTC +
Preference number: 4 (lower is better)
Translates to: AQVILTPTGAALRALRGEKVRRL*QARQRF
Trigger: GAATCGCTGTCGTGCTTGCCACAATCTCCTGACCTT...TTCTCCCCGCAAGGCCCTCAGAGCAGCGCCTGTGGGTGTCAGTATTACCTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGTCTACTGATGGACCCTaGTTGTCTGAGGAAGAGGAG +
Preference number: 4 (lower is better)
Translates to: VRSGFCLAVRGEAPVQRLSTDGP*LSEEEE
Trigger: CTCCTCTTCCTCAGACAACCAGGGTCCATCAGTAGA...CAAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
CDS-3UTR CCA 90 bp GGAGGTGGTGTCTGGGTTCCTGGTGGCTCTGCCCACCCAACAGGTGGACAGGGCCAGAAATGTCACAGCTaGCATCATTGTAGATCTTGC +
Preference number: 4 (lower is better)
Translates to: GGGVWVPGGSAHPTGGQGQKCHS*HHCRSC
Trigger: GCAAGATCTACAATGATGCCAGCTGTGACATTTCTG...GCCCTGTCCACCTGTTGGGTGGGCAGAGCCACCAGGAACCCAGACACCACCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp TCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAATGGGACCAAATCGCTTaGTGTAGAGCATTTCGCCCA +
Preference number: 4 (lower is better)
Translates to: SAVRSGFCLAVRGEAPVQWDQIA*CRAFRP
Trigger: TGGGCGAAATGCTCTACACCAAGCGATTTGGTCCCA...TTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp TCCAGTTCCCAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGTGGGACCAAATCGCTTaGTGTAGAGCATTTCGCCCA +
Preference number: 4 (lower is better)
Translates to: SSSQSAVRSGFCLAVRGEWDQIA*CRAFRP
Trigger: TGGGCGAAATGCTCTACACCAAGCGATTTGGTCCCA...CTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGACTGGGAACTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp AGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTCACCGAAATGGCATTaGGACCAAATCGCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: SCEVRFLLGGSRGGTSATSPKWH*DQIAWC
Trigger: ACACCAAGCGATTTGGTCCCAATGCCATTTCGGTGA...CGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCATCACCGAAATGGCATTaGGACCAAATCGCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: VSCEVRFLLGGSRGGTSASPKWH*DQIAWC
Trigger: ACACCAAGCGATTTGGTCCCAATGCCATTTCGGTGA...TGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGACAGGCTCACCGAAATaGCATTGGGACCAAATCGCT +
Preference number: 4 (lower is better)
Translates to: VRSGFCLAVRGEAPVQRLTGSPK*HWDQIA
Trigger: AGCGATTTGGTCCCAATGCCATTTCGGTGAGCCTGT...CAAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp ATGCCGAAGTCCCTGTCCTCAAGAATCTGGGAGCCTGGCCCGATCCCTGTTGGTCTCCTGCTGTTGGAATaGACAGTGAAGACCGTCTCG +
Preference number: 4 (lower is better)
Translates to: MPKSLSSRIWEPGPIPVGLLLLE*TVKTVS
Trigger: CGAGACGGTCTTCACTGTCCATTCCAACAGCAGGAG...ACCAACAGGGATCGGGCCAGGCTCCCAGATTCTTGAGGACAGGGACTTCGGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GAGATACCCACTTGTTCCTCTATTCACATTAAGCCCACAGTGTGGCTCTCCCGGTGCCGAAGCCGCCCATaGAGGCCATGGTGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: EIPTCSSIHIKPTVWLSRCRSRP*RPWWCS
Trigger: AGAGCACCACCATGGCCTCCATGGGCGGCTTCGGCA...CCGGGAGAGCCACACTGTGGGCTTAATGTGAATAGAGGAACAAGTGGGTATCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GAGATACCCACTTGTTCCTCTATTCACATTAAGCCCACAGTGTGGCTCTCCCGGCTCGCAGTGGAGGGTTaGTCCCTCAGCGCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: EIPTCSSIHIKPTVWLSRLAVEG*SLSAGK
Trigger: CTTCCCAGCGCTGAGGGACCAACCCTCCACTGCGAG...CCGGGAGAGCCACACTGTGGGCTTAATGTGAATAGAGGAACAAGTGGGTATCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTCCACCATCCAGAAGGTaGTTGTTATTGGTCAACTCG +
Preference number: 4 (lower is better)
Translates to: AVRSGFCLAVRGEAPVQRPPSRR*LLLVNS
Trigger: CGAGTTGACCAATAACAACCACCTTCTGGATGGTGG...ACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000526545.5
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp AAGTCCCTGTCCTCAAGAATCTGGGAGCCTGGCCCGATCCCTGTTGGTTTCAGTCCGGGCTCCAGATCCTaGAAGGTTCTAGTTCCCCGA +
Preference number: 4 (lower is better)
Translates to: KSLSSRIWEPGPIPVGFSPGSRS*KVLVPR
Trigger: TCGGGGAACTAGAACCTTCCAGGATCTGGAGCCCGG...ACTGAAACCAACAGGGATCGGGCCAGGCTCCCAGATTCTTGAGGACAGGGACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GCTCTTCCACATGTCCAGTTCCCAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCATTAAGCCCACAGTGTaGCTCTCCCGGGCTCCAGAT +
Preference number: 4 (lower is better)
Translates to: ALPHVQFPVSCEVRFLLGIKPTV*LSRAPD
Trigger: ATCTGGAGCCCGGGAGAGCCACACTGTGGGCTTAAT...GCCAAGCAGAAACCGGACCTCACAGCTGACTGGGAACTGGACATGTGGAAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGGTTACTAGGAGAAAGTaGGGTGCCTGGCAGAGATAC +
Preference number: 4 (lower is better)
Translates to: VRSGFCLAVRGEAPVQRLVTRRK*GAWQRY
Trigger: GTATCTCTGCCAGGCACCCCACTTTCTCCTAGTAAC...CAAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp AAATCACAGACTGAGACCTCACATTCTGACCTGGAGTCTCCTCCCCTTCCCCAGTGCCCACCCAACAGGTaGACAGGGCAAAGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: KSQTETSHSDLESPPLPQCPPNR*TGQSCL
Trigger: GAGGCAGCTTTGCCCTGTCCACCTGTTGGGTGGGCA...CTGGGGAAGGGGAGGAGACTCCAGGTCAGAATGTGAGGTCTCAGTCTGTGATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGCCCTGTTGGTTTCAGTaGGGTAAGACGACGAAGAGA +
Preference number: 4 (lower is better)
Translates to: VRSGFCLAVRGEAPVQRLPCWFQ*GKTTKR
Trigger: TCTCTTCGTCGTCTTACCCCACTGAAACCAACAGGG...CAAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp TCCAGTTCCCAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGCCCTGTTGGTTTCAGTaGGGTAAGACGACGAAGAGA +
Preference number: 4 (lower is better)
Translates to: SSSQSAVRSGFCLAVRGEPCWFQ*GKTTKR
Trigger: TCTCTTCGTCGTCTTACCCCACTGAAACCAACAGGG...CTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGACTGGGAACTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp CCAGCAGCTCTTCCACATGTCCAGTTCCCAGTCAGCTGTGAGGTCCGGTTTCTGGACACTGTCCTGGTGTaGCAAGAGGGAAGGAACTCG +
Preference number: 4 (lower is better)
Translates to: PAALPHVQFPVSCEVRFLDTVLV*QEGRNS
Trigger: CGAGTTCCTTCCCTCTTGCCACACCAGGACAGTGTC...CAGAAACCGGACCTCACAGCTGACTGGGAACTGGACATGTGGAAGAGCTGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458649.6
ENST00000534300.5
CDS-3UTR CCA 90 bp AAGTCCCTGTCCTCAAGAATCTGGGAGCCTGGCCCGATCCCTGTTGGTTTCAGTGTGGAGCTCGGTGCCTaGATCTGTCACCATTGTCCC +
Preference number: 4 (lower is better)
Translates to: KSLSSRIWEPGPIPVGFSVELGA*ICHHCP
Trigger: GGGACAATGGTGACAGATCCAGGCACCGAGCTCCAC...ACTGAAACCAACAGGGATCGGGCCAGGCTCCCAGATTCTTGAGGACAGGGACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534300.5
CDS-3UTR TCA 90 bp CCAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTAGAAGCAATAAGGCCTaGGATGGTGGGATGAAAAGT +
Preference number: 4 (lower is better)
Translates to: PVSCEVRFLLGGSRGGTSRSNKA*DGGMKS
Trigger: ACTTTTCATCCCACCATCTCAGGCCTTATTGCTTCT...ACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp ATCCCTGTTGGTTTCAGTGGGGTAAGACGACGAAGAGAGGCTGAAGCTCTGGAAGCAATCAGCAGGAGCTaGGCCGTAGGGTGGAAAGCC +
Preference number: 4 (lower is better)
Translates to: IPVGFSGVRRRREAEALEAISRS*AVGWKA
Trigger: GGCTTTCCACCCTACGGCTCAGCTCCTGCTGATTGC...TTCCAGAGCTTCAGCCTCTCTTCGTCGTCTTACCCCACTGAAACCAACAGGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp AAGTCCCTGTCCTCAAGAATCTGGGAGCCTGGCCCGATCCCTGTTGGTTTCAGTCCTCCCTTCTGTGGCTaGAGTGTACACAGATGCCTG +
Preference number: 4 (lower is better)
Translates to: KSLSSRIWEPGPIPVGFSPPFCG*SVHRCL
Trigger: CAGGCATCTGTGTACACTTCAGCCACAGAAGGGAGG...ACTGAAACCAACAGGGATCGGGCCAGGCTCCCAGATTCTTGAGGACAGGGACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp GCTCTTCCACATGTCCAGTTCCCAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCTCCTCAGGCATATCCTaGTGTAAGGCCTCCTGTGAC +
Preference number: 4 (lower is better)
Translates to: ALPHVQFPVSCEVRFLLGSSGIS*CKASCD
Trigger: GTCACAGGAGGCCTTACATCAGGATATGCCTGAGGA...GCCAAGCAGAAACCGGACCTCACAGCTGACTGGGAACTGGACATGTGGAAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp ATCCCTGTTGGTTTCAGTGGGGTAAGACGACGAAGAGAGGCTGAAGCTCTGGAACCAGCAGCCTCCTCCTaGGTGAATCCTCCTCAGAGC +
Preference number: 4 (lower is better)
Translates to: IPVGFSGVRRRREAEALEPAASS*VNPPQS
Trigger: GCTCTGAGGAGGATTCACTCAGGAGGAGGCTGCTGG...TTCCAGAGCTTCAGCCTCTCTTCGTCGTCTTACCCCACTGAAACCAACAGGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000534300.5
CDS-3UTR TCA 90 bp GCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTCACGGAAGCATTACTaGTTTCAGGGAGGTCAAACT +
Preference number: 4 (lower is better)
Translates to: AVRSGFCLAVRGEAPVQRSRKHY*FQGGQT
Trigger: AGTTTGACCTCCCTGAAATCAGTAATGCTTCCGTGA...ACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp CCAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTTCACGGAAGCATTACTaGTTTCAGGGAGGTCAAACT +
Preference number: 4 (lower is better)
Translates to: PVSCEVRFLLGGSRGGTSSRKHY*FQGGQT
Trigger: AGTTTGACCTCCCTGAAATCAGTAATGCTTCCGTGA...ACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp GAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGTCTGGGATAAAGGACGTTaGAAACTCTCCTCATGGAGG +
Preference number: 4 (lower is better)
Translates to: EVRFLLGGSRGGTSATFVWDKGR*KLSSWR
Trigger: CCTCCATGAGGAGAGTTTTCAACGTCCTTTATCCCA...GACAAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp GAGATACCCACTTGTTCCTCTATTCACATTAAGCCCACAGTGTGGCTCTCCCGGGCAGGGTTCCGGGGCTaGAGCCCAATGGCATTCATC +
Preference number: 4 (lower is better)
Translates to: EIPTCSSIHIKPTVWLSRAGFRG*SPMAFI
Trigger: GATGAATGCCATTGGGCTTCAGCCCCGGAACCCTGC...CCGGGAGAGCCACACTGTGGGCTTAATGTGAATAGAGGAACAAGTGGGTATCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp AAGTCCCTGTCCTCAAGAATCTGGGAGCCTGGCCCGATCCCTGTTGGTTTCAGTACTGGCACCATACTCTaGACCCTCACCTTCACCAGG +
Preference number: 4 (lower is better)
Translates to: KSLSSRIWEPGPIPVGFSTGTIL*TLTFTR
Trigger: CCTGGTGAAGGTGAGGGTTCAGAGTATGGTGCCAGT...ACTGAAACCAACAGGGATCGGGCCAGGCTCCCAGATTCTTGAGGACAGGGACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp CTGCCTCGCGGGCCTCTGTCCAGGATGATTGGCCCAGATCTGGAAGACTGTTCAGCAGTTCTACTCTCTTaGCCTCCCATTTCATCCACC +
Preference number: 4 (lower is better)
Translates to: LPRGPLSRMIGPDLEDCSAVLLS*PPISST
Trigger: GGTGGATGAAATGGGAGGGCAAGAGAGTAGAACTGC...TGAACAGTCTTCCAGATCTGGGCCAATCATCCTGGACAGAGGCCCGCGAGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp AGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGTCTGCAGTTCTACTCTCTTaGCCTCCCATTTCATCCACC +
Preference number: 4 (lower is better)
Translates to: RSGFCLAVRGEAPVQRLSAVLLS*PPISST
Trigger: GGTGGATGAAATGGGAGGGCAAGAGAGTAGAACTGC...AGACAAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp GAGATACCCACTTGTTCCTCTATTCACATTAAGCCCACAGTGTGGCTCTCCCGGTGCTCAACTCCAGCCTaGTGGAGCTGGGCGTTTGGC +
Preference number: 4 (lower is better)
Translates to: EIPTCSSIHIKPTVWLSRCSTPA*WSWAFG
Trigger: GCCAAACGCCCAGCTCCAGCAGGCTGGAGTTGAGCA...CCGGGAGAGCCACACTGTGGGCTTAATGTGAATAGAGGAACAAGTGGGTATCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp CCAGCAGCTCTTCCACATGTCCAGTTCCCAGTCAGCTGTGAGGTCCGGTTTCTGAGTACACTGCCAGGATaGCTTCATCAGGAAAGCCCC +
Preference number: 4 (lower is better)
Translates to: PAALPHVQFPVSCEVRFLSTLPG*LHQESP
Trigger: GGGGCTTTCCTGATGAAGGCATCCTGGCAGTGTACT...CAGAAACCGGACCTCACAGCTGACTGGGAACTGGACATGTGGAAGAGCTGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp ATCCCTGTTGGTTTCAGTGGGGTAAGACGACGAAGAGAGGCTGAAGCTCTGGAAGTGAGGTCCGGTTTCTaGTTGGCGGTTCGAGGGGAG +
Preference number: 4 (lower is better)
Translates to: IPVGFSGVRRRREAEALEVRSGF*LAVRGE
Trigger: CTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCAC...TTCCAGAGCTTCAGCCTCTCTTCGTCGTCTTACCCCACTGAAACCAACAGGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp AGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGCATTTGACTGTCTTGTaGCCACTGACTGATCTTCCT +
Preference number: 4 (lower is better)
Translates to: SCEVRFLLGGSRGGTSATHLTVL*PLTDLP
Trigger: AGGAAGATCAGTCAGTGGGCACAAGACAGTCAAATG...CGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp AAATCACAGACTGAGACCTCACATTCTGACCTGGAGTCTCCTCCCCTTCCCCAGCCCCGAGGCAGGCCTTaGCCATTTGACTGTCTTGTG +
Preference number: 4 (lower is better)
Translates to: KSQTETSHSDLESPPLPQPRGRP*PFDCLV
Trigger: CACAAGACAGTCAAATGGGCAAGGCCTGCCTCGGGG...CTGGGGAAGGGGAGGAGACTCCAGGTCAGAATGTGAGGTCTCAGTCTGTGATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp TCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAATCCCCCATTAGTAAATaGCGAAGTCCCTGTCCTCAA +
Preference number: 4 (lower is better)
Translates to: SAVRSGFCLAVRGEAPVQSPISK*RSPCPQ
Trigger: TTGAGGACAGGGACTTCGGCATTTACTAATGGGGGA...TTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGTCTATGGTTCACATGGGTaGAGGCTAAGAGAGTCCTGT +
Preference number: 4 (lower is better)
Translates to: EVRFLLGGSRGGTSATFVYGSHG*RLRESC
Trigger: ACAGGACTCTCTTAGCCTCCACCCATGTGAACCATA...GACAAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGTCAAAAGTGACACACCATaGAGTACGGCGGTGTCCAAT +
Preference number: 4 (lower is better)
Translates to: EVRFLLGGSRGGTSATFVKSDTP*STAVSN
Trigger: ATTGGACACCGCCGTACTCCATGGTGTGTCACTTTT...GACAAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GCTCAGGTAATACTGACACCCACAGGCGCTGCTCTGAGGGCCTTGCGGGGAGAAAGAAGTGGATCTCATTaGCAGTGGCAATCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: AQVILTPTGAALRALRGERSGSH*QWQSAG
Trigger: TCCTGCTGATTGCCACTGCCAATGAGATCCACTTCT...TTCTCCCCGCAAGGCCCTCAGAGCAGCGCCTGTGGGTGTCAGTATTACCTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGATCTATGGGGATCTCTaGTTCGTCATCACCCTGTTG +
Preference number: 4 (lower is better)
Translates to: VRSGFCLAVRGEAPVQRLIYGDL*FVITLL
Trigger: CAACAGGGTGATGACGAACCAGAGATCCCCATAGAT...CAAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGTCATCTATGGGGATCTCTaGTTCGTCATCACCCTGTTG +
Preference number: 4 (lower is better)
Translates to: EVRFLLGGSRGGTSATFVIYGDL*FVITLL
Trigger: CAACAGGGTGATGACGAACCAGAGATCCCCATAGAT...GACAAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp AAGTCCCTGTCCTCAAGAATCTGGGAGCCTGGCCCGATCCCTGTTGGTTTCAGTATGTGCAGGAAATTGTaGAGGAGAGGCGTCCGGCGA +
Preference number: 4 (lower is better)
Translates to: KSLSSRIWEPGPIPVGFSMCRKL*RRGVRR
Trigger: TCGCCGGACGCCTCTCCTCCACAATTTCCTGCACAT...ACTGAAACCAACAGGGATCGGGCCAGGCTCCCAGATTCTTGAGGACAGGGACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GAGATACCCACTTGTTCCTCTATTCACATTAAGCCCACAGTGTGGCTCTCCCGGTGGAAGGGCTCGGTCTaGATGCCAGAAGAGCGGGAG +
Preference number: 4 (lower is better)
Translates to: EIPTCSSIHIKPTVWLSRWKGSV*MPEERE
Trigger: CTCCCGCTCTTCTGGCATCCAGACCGAGCCCTTCCA...CCGGGAGAGCCACACTGTGGGCTTAATGTGAATAGAGGAACAAGTGGGTATCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314845.7
ENST00000533727.5
CDS-3UTR CCA 90 bp GCTCTTCCACATGTCCAGTTCCCAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCCTGGTGGGAAGGGCCTaGCCTCTCAGATTCAATGTT +
Preference number: 4 (lower is better)
Translates to: ALPHVQFPVSCEVRFLLGLVGRA*PLRFNV
Trigger: AACATTGAATCTGAGAGGCCAGGCCCTTCCCACCAG...GCCAAGCAGAAACCGGACCTCACAGCTGACTGGGAACTGGACATGTGGAAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp CCAGCAGCTCTTCCACATGTCCAGTTCCCAGTCAGCTGTGAGGTCCGGTTTCTGCTGGTGGGAAGGGCCTaGCCTCTCAGATTCAATGTT +
Preference number: 4 (lower is better)
Translates to: PAALPHVQFPVSCEVRFLLVGRA*PLRFNV
Trigger: AACATTGAATCTGAGAGGCCAGGCCCTTCCCACCAG...CAGAAACCGGACCTCACAGCTGACTGGGAACTGGACATGTGGAAGAGCTGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp AAATGCCGAAGTCCCTGTCCTCAAGAATCTGGGAGCCTGGCCCGATCCCTGTTGCTGGTGGGAAGGGCCTaGCCTCTCAGATTCAATGTT +
Preference number: 4 (lower is better)
Translates to: KCRSPCPQESGSLARSLLLVGRA*PLRFNV
Trigger: AACATTGAATCTGAGAGGCCAGGCCCTTCCCACCAG...CAACAGGGATCGGGCCAGGCTCCCAGATTCTTGAGGACAGGGACTTCGGCATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GAGATACCCACTTGTTCCTCTATTCACATTAAGCCCACAGTGTGGCTCTCCCGGGTTCTCACTGCTGTGTaGGGTGGGCTGGTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: EIPTCSSIHIKPTVWLSRVLTAV*GGLVGR
Trigger: CCTTCCCACCAGCCCACCCCACACAGCAGTGAGAAC...CCGGGAGAGCCACACTGTGGGCTTAATGTGAATAGAGGAACAAGTGGGTATCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp AAGTCCCTGTCCTCAAGAATCTGGGAGCCTGGCCCGATCCCTGTTGGTTTCAGTGGCCACGGGACAGGTTaGAGTTGTTCTCACTGCTGT +
Preference number: 4 (lower is better)
Translates to: KSLSSRIWEPGPIPVGFSGHGTG*SCSHCC
Trigger: ACAGCAGTGAGAACAACTCCAACCTGTCCCGTGGCC...ACTGAAACCAACAGGGATCGGGCCAGGCTCCCAGATTCTTGAGGACAGGGACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp ATCCCTGTTGGTTTCAGTGGGGTAAGACGACGAAGAGAGGCTGAAGCTCTGGAACGACAGCGATTCAGGTaGCCACGGGACAGGTTGGAG +
Preference number: 4 (lower is better)
Translates to: IPVGFSGVRRRREAEALERQRFR*PRDRLE
Trigger: CTCCAACCTGTCCCGTGGCCACCTGAATCGCTGTCG...TTCCAGAGCTTCAGCCTCTCTTCGTCGTCTTACCCCACTGAAACCAACAGGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp AGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGTCTAAGGTCAGGAGATTGTaGCAAGCACGACAGCGATTC +
Preference number: 4 (lower is better)
Translates to: RSGFCLAVRGEAPVQRLSKVRRL*QARQRF
Trigger: GAATCGCTGTCGTGCTTGCCACAATCTCCTGACCTT...AGACAAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp AAATCACAGACTGAGACCTCACATTCTGACCTGGAGTCTCCTCCCCTTCCCCAGCAGTGGCCTGTCTCCTaGTTAAAGGCCACCCCCACA +
Preference number: 4 (lower is better)
Translates to: KSQTETSHSDLESPPLPQQWPVS*LKATPT
Trigger: TGTGGGGGTGGCCTTTAACCAGGAGACAGGCCACTG...CTGGGGAAGGGGAGGAGACTCCAGGTCAGAATGTGAGGTCTCAGTCTGTGATTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GAGTTGGAGGTGGTGTCTGGGTTCCTGGTGGCTCTGCCCACCCAACAGGTGGACAAATTGGGTGCTCTCTaGATCCTGCTCCATCATAAC +
Preference number: 4 (lower is better)
Translates to: ELEVVSGFLVALPTQQVDKLGAL*ILLHHN
Trigger: GTTATGATGGAGCAGGATCCAGAGAGCACCCAATTT...GTCCACCTGTTGGGTGGGCAGAGCCACCAGGAACCCAGACACCACCTCCAACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000534300.5
CDS-3UTR CCA 90 bp AAATGCCGAAGTCCCTGTCCTCAAGAATCTGGGAGCCTGGCCCGATCCCTGTTGTCTGTTGGTAGCGCATaGAGCGCTGGCGAATACTGT +
Preference number: 4 (lower is better)
Translates to: KCRSPCPQESGSLARSLLSVGSA*SAGEYC
Trigger: ACAGTATTCGCCAGCGCTCCATGCGCTACCAACAGA...CAACAGGGATCGGGCCAGGCTCCCAGATTCTTGAGGACAGGGACTTCGGCATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
CDS-3UTR CCA 90 bp GCTCTTCCACATGTCCAGTTCCCAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCTCTGTTGGTAGCGCATaGAGCGCTGGCGAATACTGT +
Preference number: 4 (lower is better)
Translates to: ALPHVQFPVSCEVRFLLGSVGSA*SAGEYC
Trigger: ACAGTATTCGCCAGCGCTCCATGCGCTACCAACAGA...GCCAAGCAGAAACCGGACCTCACAGCTGACTGGGAACTGGACATGTGGAAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
CDS-3UTR CCA 90 bp GAGATACCCACTTGTTCCTCTATTCACATTAAGCCCACAGTGTGGCTCTCCCGGCATCCGGGCATTGCGTaGAGCTCGGTGCCTGGATCT +
Preference number: 4 (lower is better)
Translates to: EIPTCSSIHIKPTVWLSRHPGIA*SSVPGS
Trigger: AGATCCAGGCACCGAGCTCCACGCAATGCCCGGATG...CCGGGAGAGCCACACTGTGGGCTTAATGTGAATAGAGGAACAAGTGGGTATCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GCTCTTCCACATGTCCAGTTCCCAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCCAGCAAGAAACGCCTTaGGACAAAGCGTCCAAGCGA +
Preference number: 4 (lower is better)
Translates to: ALPHVQFPVSCEVRFLLGQQETP*DKASKR
Trigger: TCGCTTGGACGCTTTGTCCCAAGGCGTTTCTTGCTG...GCCAAGCAGAAACCGGACCTCACAGCTGACTGGGAACTGGACATGTGGAAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp AGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTATTGGCAATGTTACTaGCCACAGCAGACTGTCCAT +
Preference number: 4 (lower is better)
Translates to: SCEVRFLLGGSRGGTSATYWQCY*PQQTVH
Trigger: ATGGACAGTCTGCTGTGGCCAGTAACATTGCCAATA...CGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp CTGCCTCGCGGGCCTCTGTCCAGGATGATTGGCCCAGATCTGGAAGACTGTTCAACAGGCTCACCGAAATaGCATTGGGACCAAATCGCT +
Preference number: 4 (lower is better)
Translates to: LPRGPLSRMIGPDLEDCSTGSPK*HWDQIA
Trigger: AGCGATTTGGTCCCAATGCCATTTCGGTGAGCCTGT...TGAACAGTCTTCCAGATCTGGGCCAATCATCCTGGACAGAGGCCCGCGAGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GAGATACCCACTTGTTCCTCTATTCACATTAAGCCCACAGTGTGGCTCTCCCGGCCACCATGTGCTCTGTaGAGGGGTGCAGCAGGATCC +
Preference number: 4 (lower is better)
Translates to: EIPTCSSIHIKPTVWLSRPPCAL*RGAAGS
Trigger: GGATCCTGCTGCACCCCTCCACAGAGCACATGGTGG...CCGGGAGAGCCACACTGTGGGCTTAATGTGAATAGAGGAACAAGTGGGTATCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp ATCCCTGTTGGTTTCAGTGGGGTAAGACGACGAAGAGAGGCTGAAGCTCTGGAACCACCATGTGCTCTGTaGAGGGGTGCAGCAGGATCC +
Preference number: 4 (lower is better)
Translates to: IPVGFSGVRRRREAEALEPPCAL*RGAAGS
Trigger: GGATCCTGCTGCACCCCTCCACAGAGCACATGGTGG...TTCCAGAGCTTCAGCCTCTCTTCGTCGTCTTACCCCACTGAAACCAACAGGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp AAATGCCGAAGTCCCTGTCCTCAAGAATCTGGGAGCCTGGCCCGATCCCTGTTGCTCCTGCTGTTGGAATaGACAGTGAAGACCGTCTCG +
Preference number: 4 (lower is better)
Translates to: KCRSPCPQESGSLARSLLLLLLE*TVKTVS
Trigger: CGAGACGGTCTTCACTGTCCATTCCAACAGCAGGAG...CAACAGGGATCGGGCCAGGCTCCCAGATTCTTGAGGACAGGGACTTCGGCATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GCTCTTCCACATGTCCAGTTCCCAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGCGCATCTTCTCCACTaGCACCATACTCTGAACCCT +
Preference number: 4 (lower is better)
Translates to: ALPHVQFPVSCEVRFLLGAHLLH*HHTLNP
Trigger: AGGGTTCAGAGTATGGTGCCAGTGGAGAAGATGCGC...GCCAAGCAGAAACCGGACCTCACAGCTGACTGGGAACTGGACATGTGGAAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp AAGTCCCTGTCCTCAAGAATCTGGGAGCCTGGCCCGATCCCTGTTGGTTTCAGTTTGGTCCCTCAGCGCTaGGAAGGGAAACAGGAATGG +
Preference number: 4 (lower is better)
Translates to: KSLSSRIWEPGPIPVGFSLVPQR*EGKQEW
Trigger: CCATTCCTGTTTCCCTTCCCAGCGCTGAGGGACCAA...ACTGAAACCAACAGGGATCGGGCCAGGCTCCCAGATTCTTGAGGACAGGGACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp CTGCCTCGCGGGCCTCTGTCCAGGATGATTGGCCCAGATCTGGAAGACTGTTCAGAAGGTGGTTGTTATTaGTCAACTCGCAGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: LPRGPLSRMIGPDLEDCSEGGCY*STRSGG
Trigger: CCCTCCACTGCGAGTTGACCAATAACAACCACCTTC...TGAACAGTCTTCCAGATCTGGGCCAATCATCCTGGACAGAGGCCCGCGAGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp ATGCCGAAGTCCCTGTCCTCAAGAATCTGGGAGCCTGGCCCGATCCCTGTTGGTGAAGGTGGTTGTTATTaGTCAACTCGCAGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: MPKSLSSRIWEPGPIPVGEGGCY*STRSGG
Trigger: CCCTCCACTGCGAGTTGACCAATAACAACCACCTTC...ACCAACAGGGATCGGGCCAGGCTCCCAGATTCTTGAGGACAGGGACTTCGGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp TGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGTTACTAGGAGAAAGTaGGGTGCCTGGCAGAGATAC +
Preference number: 4 (lower is better)
Translates to: CEVRFLLGGSRGGTSATFVTRRK*GAWQRY
Trigger: GTATCTCTGCCAGGCACCCCACTTTCTCCTAGTAAC...AAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp TGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTTCTGTCCAGGATGATTaGCCCAGATCTGGAAGACTG +
Preference number: 4 (lower is better)
Translates to: CEVRFLLGGSRGGTSATFSVQDD*PRSGRL
Trigger: CAGTCTTCCAGATCTGGGCCAATCATCCTGGACAGA...AAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp CCAGCAGCTCTTCCACATGTCCAGTTCCCAGTCAGCTGTGAGGTCCGGTTTCTGACCATTGTCCCTCGCTaGGTCTGGGTAAATTGGGTG +
Preference number: 4 (lower is better)
Translates to: PAALPHVQFPVSCEVRFLTIVPR*VWVNWV
Trigger: CACCCAATTTACCCAGACCCAGCGAGGGACAATGGT...CAGAAACCGGACCTCACAGCTGACTGGGAACTGGACATGTGGAAGAGCTGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534300.5
CDS-3UTR TCA 90 bp GAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGTCAGAAGCAATAAGGCCTaGGATGGTGGGATGAAAAGT +
Preference number: 4 (lower is better)
Translates to: EVRFLLGGSRGGTSATFVRSNKA*DGGMKS
Trigger: ACTTTTCATCCCACCATCTCAGGCCTTATTGCTTCT...GACAAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp AGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGTCTCATTGTTGCTATCTGTaGACCAGCTTTCACTGCCAC +
Preference number: 4 (lower is better)
Translates to: RSGFCLAVRGEAPVQRLSHCCYL*TSFHCH
Trigger: GTGGCAGTGAAAGCTGGTTCACAGATAGCAACAATG...AGACAAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp CCAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTTCGTCATCACCCTGTTaGTTAGAGGGGTTAACAATT +
Preference number: 4 (lower is better)
Translates to: PVSCEVRFLLGGSRGGTSSSSPC*LEGLTI
Trigger: AATTGTTAACCCCTCTAATCAACAGGGTGATGACGA...ACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp GCTCTTCCACATGTCCAGTTCCCAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGAGCTATTTCTCGGTaGTACCTAGAAGGGTGGCTA +
Preference number: 4 (lower is better)
Translates to: ALPHVQFPVSCEVRFLLGGAISR*YLEGWL
Trigger: TAGCCACCCTTCTAGGTATCACCGAGAAATAGCTCC...GCCAAGCAGAAACCGGACCTCACAGCTGACTGGGAACTGGACATGTGGAAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp GAGATACCCACTTGTTCCTCTATTCACATTAAGCCCACAGTGTGGCTCTCCCGGAGCGGGAGTTCAGACTaGGTACTGTCCGGGTCCACT +
Preference number: 4 (lower is better)
Translates to: EIPTCSSIHIKPTVWLSRSGSSD*VLSGST
Trigger: AGTGGACCCGGACAGTACTCAGTCTGAACTCCCGCT...CCGGGAGAGCCACACTGTGGGCTTAATGTGAATAGAGGAACAAGTGGGTATCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp ATCCCTGTTGGTTTCAGTGGGGTAAGACGACGAAGAGAGGCTGAAGCTCTGGAACAGCAGGATCCTTCGTaGGGCCAAGCCCACCATTAC +
Preference number: 4 (lower is better)
Translates to: IPVGFSGVRRRREAEALEQQDPS*GQAHHY
Trigger: GTAATGGTGGGCTTGGCCTCACGAAGGATCCTGCTG...TTCCAGAGCTTCAGCCTCTCTTCGTCGTCTTACCCCACTGAAACCAACAGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp AGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGTCTTGGGATAAAGGACGTTaGAAACTCTCCTCATGGAGG +
Preference number: 4 (lower is better)
Translates to: RSGFCLAVRGEAPVQRLSWDKGR*KLSSWR
Trigger: CCTCCATGAGGAGAGTTTTCAACGTCCTTTATCCCA...AGACAAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp ATCCCTGTTGGTTTCAGTGGGGTAAGACGACGAAGAGAGGCTGAAGCTCTGGAAGGCCTCTGTCCAGGATaGTTGGCCCAGATCTGGAAG +
Preference number: 4 (lower is better)
Translates to: IPVGFSGVRRRREAEALEGLCPG*LAQIWK
Trigger: CTTCCAGATCTGGGCCAATCATCCTGGACAGAGGCC...TTCCAGAGCTTCAGCCTCTCTTCGTCGTCTTACCCCACTGAAACCAACAGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp CCAGCAGCTCTTCCACATGTCCAGTTCCCAGTCAGCTGTGAGGTCCGGTTTCTGCAGGAGATAATCTCCTaGGTGAATCCTCCTCAGAGC +
Preference number: 4 (lower is better)
Translates to: PAALPHVQFPVSCEVRFLQEIIS*VNPPQS
Trigger: GCTCTGAGGAGGATTCACTCAGGAGATTATCTCCTG...CAGAAACCGGACCTCACAGCTGACTGGGAACTGGACATGTGGAAGAGCTGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533727.5
CDS-3UTR GCA 90 bp GAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGTCACACAGTTCCAGATCTaGTGGACTGGGTGTAAATTC +
Preference number: 4 (lower is better)
Translates to: EVRFLLGGSRGGTSATFVTQFQI*WTGCKF
Trigger: GAATTTACACCCAGTCCAGCAGATCTGGAACTGTGT...GACAAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp ATCCCTGTTGGTTTCAGTGGGGTAAGACGACGAAGAGAGGCTGAAGCTCTGGAATTCCAGGCCGCTCGCTaGTCCTGCTGTTGGAATGGA +
Preference number: 4 (lower is better)
Translates to: IPVGFSGVRRRREAEALEFQAAR*SCCWNG
Trigger: TCCATTCCAACAGCAGGAGCAGCGAGCGGCCTGGAA...TTCCAGAGCTTCAGCCTCTCTTCGTCGTCTTACCCCACTGAAACCAACAGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp GAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGTCCATTTGACTGTCTTGTaGCCACTGACTGATCTTCCT +
Preference number: 4 (lower is better)
Translates to: EVRFLLGGSRGGTSATFVHLTVL*PLTDLP
Trigger: AGGAAGATCAGTCAGTGGGCACAAGACAGTCAAATG...GACAAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp GAGATACCCACTTGTTCCTCTATTCACATTAAGCCCACAGTGTGGCTCTCCCGGTGCCAGAGCAGCGGCTaGAAAGGCACAGGATCCCAA +
Preference number: 4 (lower is better)
Translates to: EIPTCSSIHIKPTVWLSRCQSSG*KGTGSQ
Trigger: TTGGGATCCTGTGCCTTTGCAGCCGCTGCTCTGGCA...CCGGGAGAGCCACACTGTGGGCTTAATGTGAATAGAGGAACAAGTGGGTATCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458649.6
ENST00000534300.5
CDS-3UTR CCA 90 bp ATGCCGAAGTCCCTGTCCTCAAGAATCTGGGAGCCTGGCCCGATCCCTGTTGGTGACAGCATTCTTTTCTaGGACAACCTTCATGGCGCT +
Preference number: 4 (lower is better)
Translates to: MPKSLSSRIWEPGPIPVGDSILF*DNLHGA
Trigger: AGCGCCATGAAGGTTGTCCCAGAAAAGAATGCTGTC...ACCAACAGGGATCGGGCCAGGCTCCCAGATTCTTGAGGACAGGGACTTCGGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp TGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGACAGCATTCTTTTCTaGGACAACCTTCATGGCGCT +
Preference number: 4 (lower is better)
Translates to: CEVRFLLGGSRGGTSATFDSILF*DNLHGA
Trigger: AGCGCCATGAAGGTTGTCCCAGAAAAGAATGCTGTC...AAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp CAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGATATTATGGTTCACATaGGTGGAGGCTAAGAGAGTC +
Preference number: 4 (lower is better)
Translates to: QSAVRSGFCLAVRGEAPVILWFT*VEAKRV
Trigger: GACTCTCTTAGCCTCCACCCATGTGAACCATAATAT...CACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp AAGTCCCTGTCCTCAAGAATCTGGGAGCCTGGCCCGATCCCTGTTGGTTTCAGTGGATCTCATTGGCAGTaGCAATCAGCAGGAGCTGAG +
Preference number: 4 (lower is better)
Translates to: KSLSSRIWEPGPIPVGFSGSHWQ*QSAGAE
Trigger: CTCAGCTCCTGCTGATTGCCACTGCCAATGAGATCC...ACTGAAACCAACAGGGATCGGGCCAGGCTCCCAGATTCTTGAGGACAGGGACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp TGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTAGAAGTGGATCTCATTaGCAGTGGCAATCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: CEVRFLLGGSRGGTSATFRSGSH*QWQSAG
Trigger: TCCTGCTGATTGCCACTGCCAATGAGATCCACTTCT...AAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp CTGCCTCGCGGGCCTCTGTCCAGGATGATTGGCCCAGATCTGGAAGACTGTTCAAGAAGTGGATCTCATTaGCAGTGGCAATCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: LPRGPLSRMIGPDLEDCSRSGSH*QWQSAG
Trigger: TCCTGCTGATTGCCACTGCCAATGAGATCCACTTCT...TGAACAGTCTTCCAGATCTGGGCCAATCATCCTGGACAGAGGCCCGCGAGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp AGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGTCTATCTATGGGGATCTCTaGTTCGTCATCACCCTGTTG +
Preference number: 4 (lower is better)
Translates to: RSGFCLAVRGEAPVQRLSIYGDL*FVITLL
Trigger: CAACAGGGTGATGACGAACCAGAGATCCCCATAGAT...AGACAAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GTGGTGTCTGGGTTCCTGGTGGCTCTGCCCACCCAACAGGTGGACAGGGCAAAGATTCTGTTCCATCTATaGGGATCTCTGGTTCGTCAT +
Preference number: 4 (lower is better)
Translates to: VVSGFLVALPTQQVDRAKILFHL*GSLVRH
Trigger: ATGACGAACCAGAGATCCCCATAGATGGAACAGAAT...CTTTGCCCTGTCCACCTGTTGGGTGGGCAGAGCCACCAGGAACCCAGACACCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp CCAGCAGCTCTTCCACATGTCCAGTTCCCAGTCAGCTGTGAGGTCCGGTTTCTGAACCCCTCCCTTCTGTaGCTGAAGTGTACACAGATG +
Preference number: 4 (lower is better)
Translates to: PAALPHVQFPVSCEVRFLNPSLL*LKCTQM
Trigger: CATCTGTGTACACTTCAGCCACAGAAGGGAGGGGTT...CAGAAACCGGACCTCACAGCTGACTGGGAACTGGACATGTGGAAGAGCTGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTCAGTTCCAGATCTGCTaGACTGGGTGTAAATTCTTT +
Preference number: 4 (lower is better)
Translates to: AVRSGFCLAVRGEAPVQRQFQIC*TGCKFF
Trigger: AAAGAATTTACACCCAGTCCAGCAGATCTGGAACTG...ACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GCTCTTCCACATGTCCAGTTCCCAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCTCTACTGATGGACCCTaGTTGTCTGAGGAAGAGGAG +
Preference number: 4 (lower is better)
Translates to: ALPHVQFPVSCEVRFLLGSTDGP*LSEEEE
Trigger: CTCCTCTTCCTCAGACAACCAGGGTCCATCAGTAGA...GCCAAGCAGAAACCGGACCTCACAGCTGACTGGGAACTGGACATGTGGAAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
CDS-3UTR CCA 90 bp GCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTCAGAAATGTCACAGCTaGCATCATTGTAGATCTTGC +
Preference number: 4 (lower is better)
Translates to: AVRSGFCLAVRGEAPVQRQKCHS*HHCRSC
Trigger: GCAAGATCTACAATGATGCCAGCTGTGACATTTCTG...ACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp AGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGTCTTACATATCTGCCCATTaGGGACAGGCTCACCGAAAT +
Preference number: 4 (lower is better)
Translates to: RSGFCLAVRGEAPVQRLSYISAH*GQAHRN
Trigger: ATTTCGGTGAGCCTGTCCCCAATGGGCAGATATGTA...AGACAAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp ATCCCTGTTGGTTTCAGTGGGGTAAGACGACGAAGAGAGGCTGAAGCTCTGGAATGCAGCCTGAAGACCTaGGCCACCATGTGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: IPVGFSGVRRRREAEALECSLKT*ATMCSV
Trigger: CACAGAGCACATGGTGGCCCAGGTCTTCAGGCTGCA...TTCCAGAGCTTCAGCCTCTCTTCGTCGTCTTACCCCACTGAAACCAACAGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp ATCCCTGTTGGTTTCAGTGGGGTAAGACGACGAAGAGAGGCTGAAGCTCTGGAAGAGGTCTCTCCACCATaGGCCTGTTGCAGCCTGAAG +
Preference number: 4 (lower is better)
Translates to: IPVGFSGVRRRREAEALEEVSPP*ACCSLK
Trigger: CTTCAGGCTGCAACAGGCCCATGGTGGAGAGACCTC...TTCCAGAGCTTCAGCCTCTCTTCGTCGTCTTACCCCACTGAAACCAACAGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp AAGTCCCTGTCCTCAAGAATCTGGGAGCCTGGCCCGATCCCTGTTGGTTTCAGTCTCCTGCTGTTGGAATaGACAGTGAAGACCGTCTCG +
Preference number: 4 (lower is better)
Translates to: KSLSSRIWEPGPIPVGFSLLLLE*TVKTVS
Trigger: CGAGACGGTCTTCACTGTCCATTCCAACAGCAGGAG...ACTGAAACCAACAGGGATCGGGCCAGGCTCCCAGATTCTTGAGGACAGGGACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp ATCCCTGTTGGTTTCAGTGGGGTAAGACGACGAAGAGAGGCTGAAGCTCTGGAATGTCTGTCCTCCATGTaGCTCTGCTGGTTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: IPVGFSGVRRRREAEALECLSSM*LCWFQA
Trigger: GGCCTGGAACCAGCAGAGCCACATGGAGGACAGACA...TTCCAGAGCTTCAGCCTCTCTTCGTCGTCTTACCCCACTGAAACCAACAGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GAGATACCCACTTGTTCCTCTATTCACATTAAGCCCACAGTGTGGCTCTCCCGGGAGATGTCACTGAGGTaGCAGGGTTCCGGGGCTGAA +
Preference number: 4 (lower is better)
Translates to: EIPTCSSIHIKPTVWLSREMSLR*QGSGAE
Trigger: TTCAGCCCCGGAACCCTGCCACCTCAGTGACATCTC...CCGGGAGAGCCACACTGTGGGCTTAATGTGAATAGAGGAACAAGTGGGTATCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp ATCCCTGTTGGTTTCAGTGGGGTAAGACGACGAAGAGAGGCTGAAGCTCTGGAATCCGCCATCAGCCTCTaGATCCTGCTGAGCGCATCT +
Preference number: 4 (lower is better)
Translates to: IPVGFSGVRRRREAEALESAISL*ILLSAS
Trigger: AGATGCGCTCAGCAGGATCCAGAGGCTGATGGCGGA...TTCCAGAGCTTCAGCCTCTCTTCGTCGTCTTACCCCACTGAAACCAACAGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp ATCCCTGTTGGTTTCAGTGGGGTAAGACGACGAAGAGAGGCTGAAGCTCTGGAATTGGTCAACTCGCAGTaGAGGGTTGGTCCCTCAGCG +
Preference number: 4 (lower is better)
Translates to: IPVGFSGVRRRREAEALELVNSQ*RVGPSA
Trigger: CGCTGAGGGACCAACCCTCCACTGCGAGTTGACCAA...TTCCAGAGCTTCAGCCTCTCTTCGTCGTCTTACCCCACTGAAACCAACAGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp TGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTCCACCATCCAGAAGGTaGTTGTTATTGGTCAACTCG +
Preference number: 4 (lower is better)
Translates to: CEVRFLLGGSRGGTSATFPPSRR*LLLVNS
Trigger: CGAGTTGACCAATAACAACCACCTTCTGGATGGTGG...AAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000526545.5
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp AAATGCCGAAGTCCCTGTCCTCAAGAATCTGGGAGCCTGGCCCGATCCCTGTTGTCTGTCCAGGATGATTaGCCCAGATCTGGAAGACTG +
Preference number: 4 (lower is better)
Translates to: KCRSPCPQESGSLARSLLSVQDD*PRSGRL
Trigger: CAGTCTTCCAGATCTGGGCCAATCATCCTGGACAGA...CAACAGGGATCGGGCCAGGCTCCCAGATTCTTGAGGACAGGGACTTCGGCATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GAGATACCCACTTGTTCCTCTATTCACATTAAGCCCACAGTGTGGCTCTCCCGGCCTCACATTCTGACCTaGAGTCTCCTCCCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: EIPTCSSIHIKPTVWLSRPHILT*SLLPFP
Trigger: GGGGAAGGGGAGGAGACTCCAGGTCAGAATGTGAGG...CCGGGAGAGCCACACTGTGGGCTTAATGTGAATAGAGGAACAAGTGGGTATCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GCTCAGGTAATACTGACACCCACAGGCGCTGCTCTGAGGGCCTTGCGGGGAGAATGTAAGTTGTCCTCATaGAAATCTGCAAGGCAGACG +
Preference number: 4 (lower is better)
Translates to: AQVILTPTGAALRALRGECKLSS*KSARQT
Trigger: CGTCTGCCTTGCAGATTTCCATGAGGACAACTTACA...TTCTCCCCGCAAGGCCCTCAGAGCAGCGCCTGTGGGTGTCAGTATTACCTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp GCTCTTCCACATGTCCAGTTCCCAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCCTGAAGCAGCTAAAATaGGGCCATACAGGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: ALPHVQFPVSCEVRFLLGLKQLK*GHTGPC
Trigger: ACAAGGACCTGTATGGCCTCATTTTAGCTGCTTCAG...GCCAAGCAGAAACCGGACCTCACAGCTGACTGGGAACTGGACATGTGGAAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp AAATGCCGAAGTCCCTGTCCTCAAGAATCTGGGAGCCTGGCCCGATCCCTGTTGTGTCCAATCAGGGAATaGACACACTTGCCAGTCTTC +
Preference number: 4 (lower is better)
Translates to: KCRSPCPQESGSLARSLLCPIRE*THLPVF
Trigger: GAAGACTGGCAAGTGTGTTCATTCCCTGATTGGACA...CAACAGGGATCGGGCCAGGCTCCCAGATTCTTGAGGACAGGGACTTCGGCATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp AGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGTCTAGAAGCAATAAGGCCTaGGATGGTGGGATGAAAAGT +
Preference number: 4 (lower is better)
Translates to: RSGFCLAVRGEAPVQRLSRSNKA*DGGMKS
Trigger: ACTTTTCATCCCACCATCTCAGGCCTTATTGCTTCT...AGACAAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp AAATGCCGAAGTCCCTGTCCTCAAGAATCTGGGAGCCTGGCCCGATCCCTGTTGCATTGTTGCTATCTGTaGACCAGCTTTCACTGCCAC +
Preference number: 4 (lower is better)
Translates to: KCRSPCPQESGSLARSLLHCCYL*TSFHCH
Trigger: GTGGCAGTGAAAGCTGGTTCACAGATAGCAACAATG...CAACAGGGATCGGGCCAGGCTCCCAGATTCTTGAGGACAGGGACTTCGGCATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp ATCCCTGTTGGTTTCAGTGGGGTAAGACGACGAAGAGAGGCTGAAGCTCTGGAAGTGTACACAGATGCCTaGGAGCCACCTTCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: IPVGFSGVRRRREAEALEVYTDA*EPPSCC
Trigger: ACAGCAGGAAGGTGGCTCTCAGGCATCTGTGTACAC...TTCCAGAGCTTCAGCCTCTCTTCGTCGTCTTACCCCACTGAAACCAACAGGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp GAGATACCCACTTGTTCCTCTATTCACATTAAGCCCACAGTGTGGCTCTCCCGGCGTCTCAGGTCACACTaGAGCTCATGGCGAATGCTG +
Preference number: 4 (lower is better)
Translates to: EIPTCSSIHIKPTVWLSRRLRSH*SSWRML
Trigger: CAGCATTCGCCATGAGCTTCAGTGTGACCTGAGACG...CCGGGAGAGCCACACTGTGGGCTTAATGTGAATAGAGGAACAAGTGGGTATCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp AAATCACAGACTGAGACCTCACATTCTGACCTGGAGTCTCCTCCCCTTCCCCAGGCAGGGTATCGTTGTTaGAGGTCAGGAGATTGTGGC +
Preference number: 4 (lower is better)
Translates to: KSQTETSHSDLESPPLPQAGYRC*RSGDCG
Trigger: GCCACAATCTCCTGACCTTCAACAACGATACCCTGC...CTGGGGAAGGGGAGGAGACTCCAGGTCAGAATGTGAGGTCTCAGTCTGTGATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp AAATGCCGAAGTCCCTGTCCTCAAGAATCTGGGAGCCTGGCCCGATCCCTGTTGAACGGGATAATGAAATaGGGGAAGATTCCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: KCRSPCPQESGSLARSLLNGIMK*GKIPAA
Trigger: GGCTGCTGGAATCTTCCCTCATTTCATTATCCCGTT...CAACAGGGATCGGGCCAGGCTCCCAGATTCTTGAGGACAGGGACTTCGGCATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000534300.5
CDS-3UTR TCA 90 bp AGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGTCTTCACGGAAGCATTACTaGTTTCAGGGAGGTCAAACT +
Preference number: 4 (lower is better)
Translates to: RSGFCLAVRGEAPVQRLSSRKHY*FQGGQT
Trigger: AGTTTGACCTCCCTGAAATCAGTAATGCTTCCGTGA...AGACAAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp CCAGCAGCTCTTCCACATGTCCAGTTCCCAGTCAGCTGTGAGGTCCGGTTTCTGTGGGATAAAGGACGTTaGAAACTCTCCTCATGGAGG +
Preference number: 4 (lower is better)
Translates to: PAALPHVQFPVSCEVRFLWDKGR*KLSSWR
Trigger: CCTCCATGAGGAGAGTTTTCAACGTCCTTTATCCCA...CAGAAACCGGACCTCACAGCTGACTGGGAACTGGACATGTGGAAGAGCTGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp ATCCCTGTTGGTTTCAGTGGGGTAAGACGACGAAGAGAGGCTGAAGCTCTGGAAACGACGAAGAGAGGCTaGAGCTCTGGAAGGCTCAGA +
Preference number: 4 (lower is better)
Translates to: IPVGFSGVRRRREAEALETTKRG*SSGRLR
Trigger: TCTGAGCCTTCCAGAGCTTCAGCCTCTCTTCGTCGT...TTCCAGAGCTTCAGCCTCTCTTCGTCGTCTTACCCCACTGAAACCAACAGGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp GAGATACCCACTTGTTCCTCTATTCACATTAAGCCCACAGTGTGGCTCTCCCGGACGACGAAGAGAGGCTaGAGCTCTGGAAGGCTCAGA +
Preference number: 4 (lower is better)
Translates to: EIPTCSSIHIKPTVWLSRTTKRG*SSGRLR
Trigger: TCTGAGCCTTCCAGAGCTTCAGCCTCTCTTCGTCGT...CCGGGAGAGCCACACTGTGGGCTTAATGTGAATAGAGGAACAAGTGGGTATCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp GAGATACCCACTTGTTCCTCTATTCACATTAAGCCCACAGTGTGGCTCTCCCGGTGGAGTTGTTCTCACTaGTGTGTGGGGTGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: EIPTCSSIHIKPTVWLSRWSCSH*CVGWAG
Trigger: ACCAGCCCACCCCACACAGCAGTGAGAACAACTCCA...CCGGGAGAGCCACACTGTGGGCTTAATGTGAATAGAGGAACAAGTGGGTATCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp GAGATACCCACTTGTTCCTCTATTCACATTAAGCCCACAGTGTGGCTCTCCCGGGAGGTGGCAACTGGCTaGCACTTGATGGCACACTCT +
Preference number: 4 (lower is better)
Translates to: EIPTCSSIHIKPTVWLSREVATG*HLMAHS
Trigger: AGAGTGTGCCATCAAGTGGCAGCCAGTTGCCACCTC...CCGGGAGAGCCACACTGTGGGCTTAATGTGAATAGAGGAACAAGTGGGTATCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp GAGATACCCACTTGTTCCTCTATTCACATTAAGCCCACAGTGTGGCTCTCCCGGTTGCGTGGAGCTCGGTaGCTGGATCTGTCACCATTG +
Preference number: 4 (lower is better)
Translates to: EIPTCSSIHIKPTVWLSRLRGAR*LDLSPL
Trigger: CAATGGTGACAGATCCAGGCACCGAGCTCCACGCAA...CCGGGAGAGCCACACTGTGGGCTTAATGTGAATAGAGGAACAAGTGGGTATCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp GTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGCATCATTGTAGATCTTaGAGTTCTGCACCAGCACAT +
Preference number: 4 (lower is better)
Translates to: VRSGFCLAVRGEAPVQRLHHCRS*SSAPAH
Trigger: ATGTGCTGGTGCAGAACTGCAAGATCTACAATGATG...CAAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp ATCCCTGTTGGTTTCAGTGGGGTAAGACGACGAAGAGAGGCTGAAGCTCTGGAACAGGAGCTGGCCATCTaGAGAAATGTCACAGCTGGC +
Preference number: 4 (lower is better)
Translates to: IPVGFSGVRRRREAEALEQELAI*RNVTAG
Trigger: GCCAGCTGTGACATTTCTGCAGATGGCCAGCTCCTG...TTCCAGAGCTTCAGCCTCTCTTCGTCGTCTTACCCCACTGAAACCAACAGGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGATATTATGGTTCACATaGGTGGAGGCTAAGAGAGTC +
Preference number: 4 (lower is better)
Translates to: VRSGFCLAVRGEAPVQRLILWFT*VEAKRV
Trigger: GACTCTCTTAGCCTCCACCCATGTGAACCATAATAT...CAAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp CCAGCAGCTCTTCCACATGTCCAGTTCCCAGTCAGCTGTGAGGTCCGGTTTCTGAAAAGTGACACACCATaGAGTACGGCGGTGTCCAAT +
Preference number: 4 (lower is better)
Translates to: PAALPHVQFPVSCEVRFLKSDTP*STAVSN
Trigger: ATTGGACACCGCCGTACTCCATGGTGTGTCACTTTT...CAGAAACCGGACCTCACAGCTGACTGGGAACTGGACATGTGGAAGAGCTGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp CCAGCAGCTCTTCCACATGTCCAGTTCCCAGTCAGCTGTGAGGTCCGGTTTCTGAGAAGTGGATCTCATTaGCAGTGGCAATCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: PAALPHVQFPVSCEVRFLRSGSH*QWQSAG
Trigger: TCCTGCTGATTGCCACTGCCAATGAGATCCACTTCT...CAGAAACCGGACCTCACAGCTGACTGGGAACTGGACATGTGGAAGAGCTGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp TCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAAATTCTGTTCCATCTATaGGGATCTCTGGTTCGTCAT +
Preference number: 4 (lower is better)
Translates to: SAVRSGFCLAVRGEAPVQILFHL*GSLVRH
Trigger: ATGACGAACCAGAGATCCCCATAGATGGAACAGAAT...TTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp AAATCACAGACTGAGACCTCACATTCTGACCTGGAGTCTCCTCCCCTTCCCCAGCCGAGTTGTTTTGGCTaGAGCCATTCCCTCCATCTG +
Preference number: 4 (lower is better)
Translates to: KSQTETSHSDLESPPLPQPSCFG*SHSLHL
Trigger: CAGATGGAGGGAATGGCTCCAGCCAAAACAACTCGG...CTGGGGAAGGGGAGGAGACTCCAGGTCAGAATGTGAGGTCTCAGTCTGTGATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp AAGTCCCTGTCCTCAAGAATCTGGGAGCCTGGCCCGATCCCTGTTGGTTTCAGTAAGGTCAGGAGATTGTaGCAAGCACGACAGCGATTC +
Preference number: 4 (lower is better)
Translates to: KSLSSRIWEPGPIPVGFSKVRRL*QARQRF
Trigger: GAATCGCTGTCGTGCTTGCCACAATCTCCTGACCTT...ACTGAAACCAACAGGGATCGGGCCAGGCTCCCAGATTCTTGAGGACAGGGACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp TCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACAGTTCCAGATCTGCTaGACTGGGTGTAAATTCTTT +
Preference number: 4 (lower is better)
Translates to: SAVRSGFCLAVRGEAPVQQFQIC*TGCKFF
Trigger: AAAGAATTTACACCCAGTCCAGCAGATCTGGAACTG...TTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp ATGCCGAAGTCCCTGTCCTCAAGAATCTGGGAGCCTGGCCCGATCCCTGTTGGTAAATTGGGTGCTCTCTaGATCCTGCTCCATCATAAC +
Preference number: 4 (lower is better)
Translates to: MPKSLSSRIWEPGPIPVGKLGAL*ILLHHN
Trigger: GTTATGATGGAGCAGGATCCAGAGAGCACCCAATTT...ACCAACAGGGATCGGGCCAGGCTCCCAGATTCTTGAGGACAGGGACTTCGGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000534300.5
CDS-3UTR CCA 90 bp TGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTTATTGGCAATGTTACTaGCCACAGCAGACTGTCCAT +
Preference number: 4 (lower is better)
Translates to: CEVRFLLGGSRGGTSATFYWQCY*PQQTVH
Trigger: ATGGACAGTCTGCTGTGGCCAGTAACATTGCCAATA...AAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GAGATACCCACTTGTTCCTCTATTCACATTAAGCCCACAGTGTGGCTCTCCCGGATTTCGCCCAGGTTATaGGGGGCCAGGGAGTACACT +
Preference number: 4 (lower is better)
Translates to: EIPTCSSIHIKPTVWLSRISPRL*GAREYT
Trigger: AGTGTACTCCCTGGCCCCCCATAACCTGGGCGAAAT...CCGGGAGAGCCACACTGTGGGCTTAATGTGAATAGAGGAACAAGTGGGTATCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp ATCCCTGTTGGTTTCAGTGGGGTAAGACGACGAAGAGAGGCTGAAGCTCTGGAAATTTCGCCCAGGTTATaGGGGGCCAGGGAGTACACT +
Preference number: 4 (lower is better)
Translates to: IPVGFSGVRRRREAEALEISPRL*GAREYT
Trigger: AGTGTACTCCCTGGCCCCCCATAACCTGGGCGAAAT...TTCCAGAGCTTCAGCCTCTCTTCGTCGTCTTACCCCACTGAAACCAACAGGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GCTCTTCCACATGTCCAGTTCCCAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCTCACCGAAATGGCATTaGGACCAAATCGCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: ALPHVQFPVSCEVRFLLGSPKWH*DQIAWC
Trigger: ACACCAAGCGATTTGGTCCCAATGCCATTTCGGTGA...GCCAAGCAGAAACCGGACCTCACAGCTGACTGGGAACTGGACATGTGGAAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp TGTAGACTATCCCCTCTCCTCCCACCACAATGTTTCTATGATGAGTTACAAACACAGGGTTGGCTGGGTTaGCTCCCGCCCAGGGGTACC +
Preference number: 4 (lower is better)
Translates to: CRLSPLLPPQCFYDELQTQGWLG*LPPRGT
Trigger: GGTACCCCTGGGCGGGAGCCAACCCAGCCAACCCTG...TGTTTGTAACTCATCATAGAAACATTGTGGTGGGAGGAGAGGGGATAGTCTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GCTCTTCCACATGTCCAGTTCCCAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCCCACCATCCAGAAGGTaGTTGTTATTGGTCAACTCG +
Preference number: 4 (lower is better)
Translates to: ALPHVQFPVSCEVRFLLGPPSRR*LLLVNS
Trigger: CGAGTTGACCAATAACAACCACCTTCTGGATGGTGG...GCCAAGCAGAAACCGGACCTCACAGCTGACTGGGAACTGGACATGTGGAAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GAGATACCCACTTGTTCCTCTATTCACATTAAGCCCACAGTGTGGCTCTCCCGGGACACTGTCCTGGTGTaGCAAGAGGGAAGGAACTCG +
Preference number: 4 (lower is better)
Translates to: EIPTCSSIHIKPTVWLSRDTVLV*QEGRNS
Trigger: CGAGTTCCTTCCCTCTTGCCACACCAGGACAGTGTC...CCGGGAGAGCCACACTGTGGGCTTAATGTGAATAGAGGAACAAGTGGGTATCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458649.6
ENST00000534300.5
CDS-3UTR TCA 90 bp GTGGTGTCTGGGTTCCTGGTGGCTCTGCCCACCCAACAGGTGGACAGGGCAAAGTTCATTAGGAGCCAATaGGATAGTCCTTATAACTCT +
Preference number: 4 (lower is better)
Translates to: VVSGFLVALPTQQVDRAKFIRSQ*DSPYNS
Trigger: AGAGTTATAAGGACTATCTCATTGGCTCCTAATGAA...CTTTGCCCTGTCCACCTGTTGGGTGGGCAGAGCCACCAGGAACCCAGACACCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314845.7
ENST00000458649.6
CDS-3UTR TCA 90 bp AGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGTCTTCGTCATCACCCTGTTaGTTAGAGGGGTTAACAATT +
Preference number: 4 (lower is better)
Translates to: RSGFCLAVRGEAPVQRLSSSSPC*LEGLTI
Trigger: AATTGTTAACCCCTCTAATCAACAGGGTGATGACGA...AGACAAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp CTGCCTCGCGGGCCTCTGTCCAGGATGATTGGCCCAGATCTGGAAGACTGTTCATCGTCATCACCCTGTTaGTTAGAGGGGTTAACAATT +
Preference number: 4 (lower is better)
Translates to: LPRGPLSRMIGPDLEDCSSSSPC*LEGLTI
Trigger: AATTGTTAACCCCTCTAATCAACAGGGTGATGACGA...TGAACAGTCTTCCAGATCTGGGCCAATCATCCTGGACAGAGGCCCGCGAGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp AAATCACAGACTGAGACCTCACATTCTGACCTGGAGTCTCCTCCCCTTCCCCAGGGAGCTATTTCTCGGTaGTACCTAGAAGGGTGGCTA +
Preference number: 4 (lower is better)
Translates to: KSQTETSHSDLESPPLPQGAISR*YLEGWL
Trigger: TAGCCACCCTTCTAGGTATCACCGAGAAATAGCTCC...CTGGGGAAGGGGAGGAGACTCCAGGTCAGAATGTGAGGTCTCAGTCTGTGATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp GCTCTTCCACATGTCCAGTTCCCAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCTCACGGAAGCATTACTaGTTTCAGGGAGGTCAAACT +
Preference number: 4 (lower is better)
Translates to: ALPHVQFPVSCEVRFLLGSRKHY*FQGGQT
Trigger: AGTTTGACCTCCCTGAAATCAGTAATGCTTCCGTGA...GCCAAGCAGAAACCGGACCTCACAGCTGACTGGGAACTGGACATGTGGAAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp AAATCACAGACTGAGACCTCACATTCTGACCTGGAGTCTCCTCCCCTTCCCCAGTGTTGGAATGGACAGTaGAGACCGTCTCGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: KSQTETSHSDLESPPLPQCWNGQ*RPSRSA
Trigger: AGCTGAACGAGACGGTCTTCACTGTCCATTCCAACA...CTGGGGAAGGGGAGGAGACTCCAGGTCAGAATGTGAGGTCTCAGTCTGTGATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp GCTCAGGTAATACTGACACCCACAGGCGCTGCTCTGAGGGCCTTGCGGGGAGAACCCAGTGGACAATGTTaGTTTCTTCTCTACATTCTT +
Preference number: 4 (lower is better)
Translates to: AQVILTPTGAALRALRGEPSGQC*FLLYIL
Trigger: AAGAATGTAGAGAAGAAAGCAACATTGTCCACTGGG...TTCTCCCCGCAAGGCCCTCAGAGCAGCGCCTGTGGGTGTCAGTATTACCTGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314845.7
ENST00000458649.6
CDS-3UTR GCA 90 bp TGTAGACTATCCCCTCTCCTCCCACCACAATGTTTCTATGATGAGTTACAAACATGCGTTGACGAGGCCTaGTCCGGGGGATGGAAGGGC +
Preference number: 4 (lower is better)
Translates to: CRLSPLLPPQCFYDELQTCVDEA*SGGWKG
Trigger: GCCCTTCCATCCCCCGGAGCAGGCCTCGTCAACGCA...TGTTTGTAACTCATCATAGAAACATTGTGGTGGGAGGAGAGGGGATAGTCTACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp GCTCTTCCACATGTCCAGTTCCCAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCACACAGTTCCAGATCTaGTGGACTGGGTGTAAATTC +
Preference number: 4 (lower is better)
Translates to: ALPHVQFPVSCEVRFLLGTQFQI*WTGCKF
Trigger: GAATTTACACCCAGTCCAGCAGATCTGGAACTGTGT...GCCAAGCAGAAACCGGACCTCACAGCTGACTGGGAACTGGACATGTGGAAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp GCTCTTCCACATGTCCAGTTCCCAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCCATTTGACTGTCTTGTaGCCACTGACTGATCTTCCT +
Preference number: 4 (lower is better)
Translates to: ALPHVQFPVSCEVRFLLGHLTVL*PLTDLP
Trigger: AGGAAGATCAGTCAGTGGGCACAAGACAGTCAAATG...GCCAAGCAGAAACCGGACCTCACAGCTGACTGGGAACTGGACATGTGGAAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp ATCCCTGTTGGTTTCAGTGGGGTAAGACGACGAAGAGAGGCTGAAGCTCTGGAAGGATCTCATTGGCAGTaGCAATCAGCAGGAGCTGAG +
Preference number: 4 (lower is better)
Translates to: IPVGFSGVRRRREAEALEGSHWQ*QSAGAE
Trigger: CTCAGCTCCTGCTGATTGCCACTGCCAATGAGATCC...TTCCAGAGCTTCAGCCTCTCTTCGTCGTCTTACCCCACTGAAACCAACAGGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GAGATACCCACTTGTTCCTCTATTCACATTAAGCCCACAGTGTGGCTCTCCCGGTTGTTGAGCATTTCCTaGGCCTGTTGGGTCTGGGGA +
Preference number: 4 (lower is better)
Translates to: EIPTCSSIHIKPTVWLSRLLSIS*ACWVWG
Trigger: TCCCCAGACCCAACAGGCCCAGGAAATGCTCAACAA...CCGGGAGAGCCACACTGTGGGCTTAATGTGAATAGAGGAACAAGTGGGTATCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp AAATCACAGACTGAGACCTCACATTCTGACCTGGAGTCTCCTCCCCTTCCCCAGAAGGTCAGGAGATTGTaGCAAGCACGACAGCGATTC +
Preference number: 4 (lower is better)
Translates to: KSQTETSHSDLESPPLPQKVRRL*QARQRF
Trigger: GAATCGCTGTCGTGCTTGCCACAATCTCCTGACCTT...CTGGGGAAGGGGAGGAGACTCCAGGTCAGAATGTGAGGTCTCAGTCTGTGATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp ATCCCTGTTGGTTTCAGTGGGGTAAGACGACGAAGAGAGGCTGAAGCTCTGGAATGGGTCTGGGTAAATTaGGTGCTCTCTGGATCCTGC +
Preference number: 4 (lower is better)
Translates to: IPVGFSGVRRRREAEALEWVWVN*VLSGSC
Trigger: GCAGGATCCAGAGAGCACCCAATTTACCCAGACCCA...TTCCAGAGCTTCAGCCTCTCTTCGTCGTCTTACCCCACTGAAACCAACAGGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000534300.5
CDS-3UTR CCA 90 bp GAGATACCCACTTGTTCCTCTATTCACATTAAGCCCACAGTGTGGCTCTCCCGGCAGCAAGAAACGCCTTaGGACAAAGCGTCCAAGCGA +
Preference number: 4 (lower is better)
Translates to: EIPTCSSIHIKPTVWLSRQQETP*DKASKR
Trigger: TCGCTTGGACGCTTTGTCCCAAGGCGTTTCTTGCTG...CCGGGAGAGCCACACTGTGGGCTTAATGTGAATAGAGGAACAAGTGGGTATCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp CCAGCAGCTCTTCCACATGTCCAGTTCCCAGTCAGCTGTGAGGTCCGGTTTCTGTATTGGCAATGTTACTaGCCACAGCAGACTGTCCAT +
Preference number: 4 (lower is better)
Translates to: PAALPHVQFPVSCEVRFLYWQCY*PQQTVH
Trigger: ATGGACAGTCTGCTGTGGCCAGTAACATTGCCAATA...CAGAAACCGGACCTCACAGCTGACTGGGAACTGGACATGTGGAAGAGCTGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp ATGCCGAAGTCCCTGTCCTCAAGAATCTGGGAGCCTGGCCCGATCCCTGTTGGTCAGAAATGTCACAGCTaGCATCATTGTAGATCTTGC +
Preference number: 4 (lower is better)
Translates to: MPKSLSSRIWEPGPIPVGQKCHS*HHCRSC
Trigger: GCAAGATCTACAATGATGCCAGCTGTGACATTTCTG...ACCAACAGGGATCGGGCCAGGCTCCCAGATTCTTGAGGACAGGGACTTCGGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp AAGTCCCTGTCCTCAAGAATCTGGGAGCCTGGCCCGATCCCTGTTGGTTTCAGTTACATATCTGCCCATTaGGGACAGGCTCACCGAAAT +
Preference number: 4 (lower is better)
Translates to: KSLSSRIWEPGPIPVGFSYISAH*GQAHRN
Trigger: ATTTCGGTGAGCCTGTCCCCAATGGGCAGATATGTA...ACTGAAACCAACAGGGATCGGGCCAGGCTCCCAGATTCTTGAGGACAGGGACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp TGTAGACTATCCCCTCTCCTCCCACCACAATGTTTCTATGATGAGTTACAAACACGCCCATGGAGGCCATaGTGGTGCTCTGCTCCCGCT +
Preference number: 4 (lower is better)
Translates to: CRLSPLLPPQCFYDELQTRPWRP*WCSAPA
Trigger: AGCGGGAGCAGAGCACCACCATGGCCTCCATGGGCG...TGTTTGTAACTCATCATAGAAACATTGTGGTGGGAGGAGAGGGGATAGTCTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp AAGTCCCTGTCCTCAAGAATCTGGGAGCCTGGCCCGATCCCTGTTGGTTTCAGTCCACCATCCAGAAGGTaGTTGTTATTGGTCAACTCG +
Preference number: 4 (lower is better)
Translates to: KSLSSRIWEPGPIPVGFSPPSRR*LLLVNS
Trigger: CGAGTTGACCAATAACAACCACCTTCTGGATGGTGG...ACTGAAACCAACAGGGATCGGGCCAGGCTCCCAGATTCTTGAGGACAGGGACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp AAATCACAGACTGAGACCTCACATTCTGACCTGGAGTCTCCTCCCCTTCCCCAGTCTGTCCAGGATGATTaGCCCAGATCTGGAAGACTG +
Preference number: 4 (lower is better)
Translates to: KSQTETSHSDLESPPLPQSVQDD*PRSGRL
Trigger: CAGTCTTCCAGATCTGGGCCAATCATCCTGGACAGA...CTGGGGAAGGGGAGGAGACTCCAGGTCAGAATGTGAGGTCTCAGTCTGTGATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp AAATCACAGACTGAGACCTCACATTCTGACCTGGAGTCTCCTCCCCTTCCCCAGCCCTGTTGGTTTCAGTaGGGTAAGACGACGAAGAGA +
Preference number: 4 (lower is better)
Translates to: KSQTETSHSDLESPPLPQPCWFQ*GKTTKR
Trigger: TCTCTTCGTCGTCTTACCCCACTGAAACCAACAGGG...CTGGGGAAGGGGAGGAGACTCCAGGTCAGAATGTGAGGTCTCAGTCTGTGATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp ATCCCTGTTGGTTTCAGTGGGGTAAGACGACGAAGAGAGGCTGAAGCTCTGGAAAAGAATCTGGGAGCCTaGCCCGATCCCTGTTGGTTT +
Preference number: 4 (lower is better)
Translates to: IPVGFSGVRRRREAEALEKNLGA*PDPCWF
Trigger: AAACCAACAGGGATCGGGCCAGGCTCCCAGATTCTT...TTCCAGAGCTTCAGCCTCTCTTCGTCGTCTTACCCCACTGAAACCAACAGGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp GAGATACCCACTTGTTCCTCTATTCACATTAAGCCCACAGTGTGGCTCTCCCGGGGAGCTATTTCTCGGTaGTACCTAGAAGGGTGGCTA +
Preference number: 4 (lower is better)
Translates to: EIPTCSSIHIKPTVWLSRGAISR*YLEGWL
Trigger: TAGCCACCCTTCTAGGTATCACCGAGAAATAGCTCC...CCGGGAGAGCCACACTGTGGGCTTAATGTGAATAGAGGAACAAGTGGGTATCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp AAGTCCCTGTCCTCAAGAATCTGGGAGCCTGGCCCGATCCCTGTTGGTTTCAGTACACAGTTCCAGATCTaGTGGACTGGGTGTAAATTC +
Preference number: 4 (lower is better)
Translates to: KSLSSRIWEPGPIPVGFSTQFQI*WTGCKF
Trigger: GAATTTACACCCAGTCCAGCAGATCTGGAACTGTGT...ACTGAAACCAACAGGGATCGGGCCAGGCTCCCAGATTCTTGAGGACAGGGACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp TGTAGACTATCCCCTCTCCTCCCACCACAATGTTTCTATGATGAGTTACAAACACAGACATCCGGGCATTaGGTGGAGCTCGGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: CRLSPLLPPQCFYDELQTQTSGH*VELGAW
Trigger: CCAGGCACCGAGCTCCACGCAATGCCCGGATGTCTG...TGTTTGTAACTCATCATAGAAACATTGTGGTGGGAGGAGAGGGGATAGTCTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp CCAGCAGCTCTTCCACATGTCCAGTTCCCAGTCAGCTGTGAGGTCCGGTTTCTGCATCATTGTAGATCTTaGAGTTCTGCACCAGCACAT +
Preference number: 4 (lower is better)
Translates to: PAALPHVQFPVSCEVRFLHHCRS*SSAPAH
Trigger: ATGTGCTGGTGCAGAACTGCAAGATCTACAATGATG...CAGAAACCGGACCTCACAGCTGACTGGGAACTGGACATGTGGAAGAGCTGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp GTACAGTTAAGAGTCCACATGCAACACCTTAAATCACAGACTGAGACCTCACATACCTGGGCCACCATGTaGTCTGTGGAGGGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: VQLRVHMQHLKSQTETSHTWATM*SVEGCS
Trigger: GCTGCACCCCTCCACAGAGCACATGGTGGCCCAGGT...ATGTGAGGTCTCAGTCTGTGATTTAAGGTGTTGCATGTGGACTCTTAACTGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp ATCCCTGTTGGTTTCAGTGGGGTAAGACGACGAAGAGAGGCTGAAGCTCTGGAACAGAATCTTGCACTGTaGTTTGCTCTCCCACCTGGA +
Preference number: 4 (lower is better)
Translates to: IPVGFSGVRRRREAEALEQNLAL*FALPPG
Trigger: TCCAGGTGGGAGAGCAAAGCACAGTGCAAGATTCTG...TTCCAGAGCTTCAGCCTCTCTTCGTCGTCTTACCCCACTGAAACCAACAGGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458649.6
ENST00000534300.5
CDS-3UTR CCA 90 bp TCCAGTTCCCAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGCTTATCAATTCCCAGTaGACAATGTTGCTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: SSSQSAVRSGFCLAVRGELINSQ*TMLLSS
Trigger: AGAAGAAAGCAACATTGTCCACTGGGAATTGATAAG...CTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGACTGGGAACTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314845.7
ENST00000458649.6
CDS-3UTR CCA 90 bp GAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGTCCTTATCAATTCCCAGTaGACAATGTTGCTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: EVRFLLGGSRGGTSATFVLINSQ*TMLLSS
Trigger: AGAAGAAAGCAACATTGTCCACTGGGAATTGATAAG...GACAAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314845.7
ENST00000458649.6
CDS-3UTR CCA 90 bp AAATCACAGACTGAGACCTCACATTCTGACCTGGAGTCTCCTCCCCTTCCCCAGATCTATGGGGATCTCTaGTTCGTCATCACCCTGTTG +
Preference number: 4 (lower is better)
Translates to: KSQTETSHSDLESPPLPQIYGDL*FVITLL
Trigger: CAACAGGGTGATGACGAACCAGAGATCCCCATAGAT...CTGGGGAAGGGGAGGAGACTCCAGGTCAGAATGTGAGGTCTCAGTCTGTGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp CCAGCAGCTCTTCCACATGTCCAGTTCCCAGTCAGCTGTGAGGTCCGGTTTCTGATTCTGTTCCATCTATaGGGATCTCTGGTTCGTCAT +
Preference number: 4 (lower is better)
Translates to: PAALPHVQFPVSCEVRFLILFHL*GSLVRH
Trigger: ATGACGAACCAGAGATCCCCATAGATGGAACAGAAT...CAGAAACCGGACCTCACAGCTGACTGGGAACTGGACATGTGGAAGAGCTGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp ATCCCTGTTGGTTTCAGTGGGGTAAGACGACGAAGAGAGGCTGAAGCTCTGGAAAACCCCTCCCTTCTGTaGCTGAAGTGTACACAGATG +
Preference number: 4 (lower is better)
Translates to: IPVGFSGVRRRREAEALENPSLL*LKCTQM
Trigger: CATCTGTGTACACTTCAGCCACAGAAGGGAGGGGTT...TTCCAGAGCTTCAGCCTCTCTTCGTCGTCTTACCCCACTGAAACCAACAGGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp AAATGCCGAAGTCCCTGTCCTCAAGAATCTGGGAGCCTGGCCCGATCCCTGTTGCAGTTCCAGATCTGCTaGACTGGGTGTAAATTCTTT +
Preference number: 4 (lower is better)
Translates to: KCRSPCPQESGSLARSLLQFQIC*TGCKFF
Trigger: AAAGAATTTACACCCAGTCCAGCAGATCTGGAACTG...CAACAGGGATCGGGCCAGGCTCCCAGATTCTTGAGGACAGGGACTTCGGCATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp AAGTCCCTGTCCTCAAGAATCTGGGAGCCTGGCCCGATCCCTGTTGGTTTCAGTAAATTGGGTGCTCTCTaGATCCTGCTCCATCATAAC +
Preference number: 4 (lower is better)
Translates to: KSLSSRIWEPGPIPVGFSKLGAL*ILLHHN
Trigger: GTTATGATGGAGCAGGATCCAGAGAGCACCCAATTT...ACTGAAACCAACAGGGATCGGGCCAGGCTCCCAGATTCTTGAGGACAGGGACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000534300.5
CDS-3UTR CCA 90 bp ATCCCTGTTGGTTTCAGTGGGGTAAGACGACGAAGAGAGGCTGAAGCTCTGGAATGGGACCAAATCGCTTaGTGTAGAGCATTTCGCCCA +
Preference number: 4 (lower is better)
Translates to: IPVGFSGVRRRREAEALEWDQIA*CRAFRP
Trigger: TGGGCGAAATGCTCTACACCAAGCGATTTGGTCCCA...TTCCAGAGCTTCAGCCTCTCTTCGTCGTCTTACCCCACTGAAACCAACAGGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp ATCCCTGTTGGTTTCAGTGGGGTAAGACGACGAAGAGAGGCTGAAGCTCTGGAAACAGGCTCACCGAAATaGCATTGGGACCAAATCGCT +
Preference number: 4 (lower is better)
Translates to: IPVGFSGVRRRREAEALETGSPK*HWDQIA
Trigger: AGCGATTTGGTCCCAATGCCATTTCGGTGAGCCTGT...TTCCAGAGCTTCAGCCTCTCTTCGTCGTCTTACCCCACTGAAACCAACAGGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GAGATACCCACTTGTTCCTCTATTCACATTAAGCCCACAGTGTGGCTCTCCCGGACAGGCTCACCGAAATaGCATTGGGACCAAATCGCT +
Preference number: 4 (lower is better)
Translates to: EIPTCSSIHIKPTVWLSRTGSPK*HWDQIA
Trigger: AGCGATTTGGTCCCAATGCCATTTCGGTGAGCCTGT...CCGGGAGAGCCACACTGTGGGCTTAATGTGAATAGAGGAACAAGTGGGTATCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GAGATACCCACTTGTTCCTCTATTCACATTAAGCCCACAGTGTGGCTCTCCCGGGTTACTAGGAGAAAGTaGGGTGCCTGGCAGAGATAC +
Preference number: 4 (lower is better)
Translates to: EIPTCSSIHIKPTVWLSRVTRRK*GAWQRY
Trigger: GTATCTCTGCCAGGCACCCCACTTTCTCCTAGTAAC...CCGGGAGAGCCACACTGTGGGCTTAATGTGAATAGAGGAACAAGTGGGTATCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp TGTAGACTATCCCCTCTCCTCCCACCACAATGTTTCTATGATGAGTTACAAACACTCAGTTGCCAACCCTaGTGCCGGAAAACCCCTCCC +
Preference number: 4 (lower is better)
Translates to: CRLSPLLPPQCFYDELQTLSCQP*CRKTPP
Trigger: GGGAGGGGTTTTCCGGCATCAGGGTTGGCAACTGAG...TGTTTGTAACTCATCATAGAAACATTGTGGTGGGAGGAGAGGGGATAGTCTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp GCTCTTCCACATGTCCAGTTCCCAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCCCCAGTGGACAATGTTaGTTTCTTCTCTACATTCTT +
Preference number: 4 (lower is better)
Translates to: ALPHVQFPVSCEVRFLLGPSGQC*FLLYIL
Trigger: AAGAATGTAGAGAAGAAAGCAACATTGTCCACTGGG...GCCAAGCAGAAACCGGACCTCACAGCTGACTGGGAACTGGACATGTGGAAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314845.7
ENST00000458649.6
CDS-3UTR GCA 90 bp TGTAGACTATCCCCTCTCCTCCCACCACAATGTTTCTATGATGAGTTACAAACAAGGGCTCGGTCTGGATaGCAGAAGAGCGGGAGGACA +
Preference number: 4 (lower is better)
Translates to: CRLSPLLPPQCFYDELQTRARSG*QKSGRT
Trigger: TGTCCTCCCGCTCTTCTGGCATCCAGACCGAGCCCT...TGTTTGTAACTCATCATAGAAACATTGTGGTGGGAGGAGAGGGGATAGTCTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314845.7
ENST00000533727.5
CDS-3UTR GCA 90 bp GTACAGTTAAGAGTCCACATGCAACACCTTAAATCACAGACTGAGACCTCACATTGCTCAACTCCAGCCTaGTGGAGCTGGGCGTTTGGC +
Preference number: 4 (lower is better)
Translates to: VQLRVHMQHLKSQTETSHCSTPA*WSWAFG
Trigger: GCCAAACGCCCAGCTCCAGCAGGCTGGAGTTGAGCA...ATGTGAGGTCTCAGTCTGTGATTTAAGGTGTTGCATGTGGACTCTTAACTGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp AAGTCCCTGTCCTCAAGAATCTGGGAGCCTGGCCCGATCCCTGTTGGTTTCAGTCATCATTGTAGATCTTaGAGTTCTGCACCAGCACAT +
Preference number: 4 (lower is better)
Translates to: KSLSSRIWEPGPIPVGFSHHCRS*SSAPAH
Trigger: ATGTGCTGGTGCAGAACTGCAAGATCTACAATGATG...ACTGAAACCAACAGGGATCGGGCCAGGCTCCCAGATTCTTGAGGACAGGGACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp GTACAGTTAAGAGTCCACATGCAACACCTTAAATCACAGACTGAGACCTCACATGGGCCAGAGTCTGGGTaGCCTGAGATGTCACTGAGG +
Preference number: 4 (lower is better)
Translates to: VQLRVHMQHLKSQTETSHGPESG*PEMSLR
Trigger: CCTCAGTGACATCTCAGGGCACCCAGACTCTGGCCC...ATGTGAGGTCTCAGTCTGTGATTTAAGGTGTTGCATGTGGACTCTTAACTGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp ATCCCTGTTGGTTTCAGTGGGGTAAGACGACGAAGAGAGGCTGAAGCTCTGGAAGACAGCATTCTTTTCTaGGACAACCTTCATGGCGCT +
Preference number: 4 (lower is better)
Translates to: IPVGFSGVRRRREAEALEDSILF*DNLHGA
Trigger: AGCGCCATGAAGGTTGTCCCAGAAAAGAATGCTGTC...TTCCAGAGCTTCAGCCTCTCTTCGTCGTCTTACCCCACTGAAACCAACAGGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp ATCCCTGTTGGTTTCAGTGGGGTAAGACGACGAAGAGAGGCTGAAGCTCTGGAATATGGTTCACATGGGTaGAGGCTAAGAGAGTCCTGT +
Preference number: 4 (lower is better)
Translates to: IPVGFSGVRRRREAEALEYGSHG*RLRESC
Trigger: ACAGGACTCTCTTAGCCTCCACCCATGTGAACCATA...TTCCAGAGCTTCAGCCTCTCTTCGTCGTCTTACCCCACTGAAACCAACAGGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GAGATACCCACTTGTTCCTCTATTCACATTAAGCCCACAGTGTGGCTCTCCCGGTATGGTTCACATGGGTaGAGGCTAAGAGAGTCCTGT +
Preference number: 4 (lower is better)
Translates to: EIPTCSSIHIKPTVWLSRYGSHG*RLRESC
Trigger: ACAGGACTCTCTTAGCCTCCACCCATGTGAACCATA...CCGGGAGAGCCACACTGTGGGCTTAATGTGAATAGAGGAACAAGTGGGTATCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GTACAGTTAAGAGTCCACATGCAACACCTTAAATCACAGACTGAGACCTCACATTCAACTCCAGCCTGCTaGAGCTGGGCGTTTGGCCCT +
Preference number: 4 (lower is better)
Translates to: VQLRVHMQHLKSQTETSHSTPAC*SWAFGP
Trigger: AGGGCCAAACGCCCAGCTCCAGCAGGCTGGAGTTGA...ATGTGAGGTCTCAGTCTGTGATTTAAGGTGTTGCATGTGGACTCTTAACTGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp ATCCCTGTTGGTTTCAGTGGGGTAAGACGACGAAGAGAGGCTGAAGCTCTGGAATACATATCTGCCCATTaGGGACAGGCTCACCGAAAT +
Preference number: 4 (lower is better)
Translates to: IPVGFSGVRRRREAEALEYISAH*GQAHRN
Trigger: ATTTCGGTGAGCCTGTCCCCAATGGGCAGATATGTA...TTCCAGAGCTTCAGCCTCTCTTCGTCGTCTTACCCCACTGAAACCAACAGGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp TGTAGACTATCCCCTCTCCTCCCACCACAATGTTTCTATGATGAGTTACAAACATGCCCACCCAACAGGTaGACAGGGCAAAGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: CRLSPLLPPQCFYDELQTCPPNR*TGQSCL
Trigger: GAGGCAGCTTTGCCCTGTCCACCTGTTGGGTGGGCA...TGTTTGTAACTCATCATAGAAACATTGTGGTGGGAGGAGAGGGGATAGTCTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp TGTAGACTATCCCCTCTCCTCCCACCACAATGTTTCTATGATGAGTTACAAACATGTCTGGGTTCCTGGTaGCTCTGCCCACCCAACAGG +
Preference number: 4 (lower is better)
Translates to: CRLSPLLPPQCFYDELQTCLGSW*LCPPNR
Trigger: CCTGTTGGGTGGGCAGAGCCACCAGGAACCCAGACA...TGTTTGTAACTCATCATAGAAACATTGTGGTGGGAGGAGAGGGGATAGTCTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp AAATCACAGACTGAGACCTCACATTCTGACCTGGAGTCTCCTCCCCTTCCCCAGTGTAAGTTGTCCTCATaGAAATCTGCAAGGCAGACG +
Preference number: 4 (lower is better)
Translates to: KSQTETSHSDLESPPLPQCKLSS*KSARQT
Trigger: CGTCTGCCTTGCAGATTTCCATGAGGACAACTTACA...CTGGGGAAGGGGAGGAGACTCCAGGTCAGAATGTGAGGTCTCAGTCTGTGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp AAATCACAGACTGAGACCTCACATTCTGACCTGGAGTCTCCTCCCCTTCCCCAGTCGTCATCACCCTGTTaGTTAGAGGGGTTAACAATT +
Preference number: 4 (lower is better)
Translates to: KSQTETSHSDLESPPLPQSSSPC*LEGLTI
Trigger: AATTGTTAACCCCTCTAATCAACAGGGTGATGACGA...CTGGGGAAGGGGAGGAGACTCCAGGTCAGAATGTGAGGTCTCAGTCTGTGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp GTACAGTTAAGAGTCCACATGCAACACCTTAAATCACAGACTGAGACCTCACATTGCTCTGGACTGTACTaGAGGCAGACGGCCGGTTCA +
Preference number: 4 (lower is better)
Translates to: VQLRVHMQHLKSQTETSHCSGLY*RQTAGS
Trigger: TGAACCGGCCGTCTGCCTTCAGTACAGTCCAGAGCA...ATGTGAGGTCTCAGTCTGTGATTTAAGGTGTTGCATGTGGACTCTTAACTGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp GTACAGTTAAGAGTCCACATGCAACACCTTAAATCACAGACTGAGACCTCACATCAGCCTCCTCCTGAGTaGATCCTCCTCAGAGCTCTC +
Preference number: 4 (lower is better)
Translates to: VQLRVHMQHLKSQTETSHQPPPE*ILLRAL
Trigger: GAGAGCTCTGAGGAGGATTCACTCAGGAGGAGGCTG...ATGTGAGGTCTCAGTCTGTGATTTAAGGTGTTGCATGTGGACTCTTAACTGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000534300.5
CDS-3UTR TCA 90 bp TGTAGACTATCCCCTCTCCTCCCACCACAATGTTTCTATGATGAGTTACAAACAAGAGTCTGGGTGCCCTaGGATGTCACTGAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: CRLSPLLPPQCFYDELQTRVWVP*DVTEVA
Trigger: TGCCACCTCAGTGACATCTCAGGGCACCCAGACTCT...TGTTTGTAACTCATCATAGAAACATTGTGGTGGGAGGAGAGGGGATAGTCTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp GAGATACCCACTTGTTCCTCTATTCACATTAAGCCCACAGTGTGGCTCTCCCGGCATTTGACTGTCTTGTaGCCACTGACTGATCTTCCT +
Preference number: 4 (lower is better)
Translates to: EIPTCSSIHIKPTVWLSRHLTVL*PLTDLP
Trigger: AGGAAGATCAGTCAGTGGGCACAAGACAGTCAAATG...CCGGGAGAGCCACACTGTGGGCTTAATGTGAATAGAGGAACAAGTGGGTATCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GAGATACCCACTTGTTCCTCTATTCACATTAAGCCCACAGTGTGGCTCTCCCGGTATTGGCAATGTTACTaGCCACAGCAGACTGTCCAT +
Preference number: 4 (lower is better)
Translates to: EIPTCSSIHIKPTVWLSRYWQCY*PQQTVH
Trigger: ATGGACAGTCTGCTGTGGCCAGTAACATTGCCAATA...CCGGGAGAGCCACACTGTGGGCTTAATGTGAATAGAGGAACAAGTGGGTATCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GTACAGTTAAGAGTCCACATGCAACACCTTAAATCACAGACTGAGACCTCACATTGCAGCCTGAAGACCTaGGCCACCATGTGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: VQLRVHMQHLKSQTETSHCSLKT*ATMCSV
Trigger: CACAGAGCACATGGTGGCCCAGGTCTTCAGGCTGCA...ATGTGAGGTCTCAGTCTGTGATTTAAGGTGTTGCATGTGGACTCTTAACTGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GTACAGTTAAGAGTCCACATGCAACACCTTAAATCACAGACTGAGACCTCACATTGTCTGTCCTCCATGTaGCTCTGCTGGTTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: VQLRVHMQHLKSQTETSHCLSSM*LCWFQA
Trigger: GGCCTGGAACCAGCAGAGCCACATGGAGGACAGACA...ATGTGAGGTCTCAGTCTGTGATTTAAGGTGTTGCATGTGGACTCTTAACTGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GTACAGTTAAGAGTCCACATGCAACACCTTAAATCACAGACTGAGACCTCACATTCCGCCATCAGCCTCTaGATCCTGCTGAGCGCATCT +
Preference number: 4 (lower is better)
Translates to: VQLRVHMQHLKSQTETSHSAISL*ILLSAS
Trigger: AGATGCGCTCAGCAGGATCCAGAGGCTGATGGCGGA...ATGTGAGGTCTCAGTCTGTGATTTAAGGTGTTGCATGTGGACTCTTAACTGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GTACAGTTAAGAGTCCACATGCAACACCTTAAATCACAGACTGAGACCTCACATCCGGGCTCCAGATCCTaGAAGGTTCTAGTTCCCCGA +
Preference number: 4 (lower is better)
Translates to: VQLRVHMQHLKSQTETSHPGSRS*KVLVPR
Trigger: TCGGGGAACTAGAACCTTCCAGGATCTGGAGCCCGG...ATGTGAGGTCTCAGTCTGTGATTTAAGGTGTTGCATGTGGACTCTTAACTGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp TGTAGACTATCCCCTCTCCTCCCACCACAATGTTTCTATGATGAGTTACAAACACCTCCCTTCTGTGGCTaGAGTGTACACAGATGCCTG +
Preference number: 4 (lower is better)
Translates to: CRLSPLLPPQCFYDELQTPPFCG*SVHRCL
Trigger: CAGGCATCTGTGTACACTTCAGCCACAGAAGGGAGG...TGTTTGTAACTCATCATAGAAACATTGTGGTGGGAGGAGAGGGGATAGTCTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp TGTAGACTATCCCCTCTCCTCCCACCACAATGTTTCTATGATGAGTTACAAACAACGACGAAGAGAGGCTaGAGCTCTGGAAGGCTCAGA +
Preference number: 4 (lower is better)
Translates to: CRLSPLLPPQCFYDELQTTTKRG*SSGRLR
Trigger: TCTGAGCCTTCCAGAGCTTCAGCCTCTCTTCGTCGT...TGTTTGTAACTCATCATAGAAACATTGTGGTGGGAGGAGAGGGGATAGTCTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp TGTAGACTATCCCCTCTCCTCCCACCACAATGTTTCTATGATGAGTTACAAACAGCTCATGGCGAATGCTaGCCGAGTTGTTTTGGCTGG +
Preference number: 4 (lower is better)
Translates to: CRLSPLLPPQCFYDELQTAHGEC*PSCFGW
Trigger: CCAGCCAAAACAACTCGGGCAGCATTCGCCATGAGC...TGTTTGTAACTCATCATAGAAACATTGTGGTGGGAGGAGAGGGGATAGTCTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp TGTAGACTATCCCCTCTCCTCCCACCACAATGTTTCTATGATGAGTTACAAACAGAGGGGAGGCACCAGTaGAACGTTTGTCTCTACCTG +
Preference number: 4 (lower is better)
Translates to: CRLSPLLPPQCFYDELQTEGRHQ*NVCLYL
Trigger: CAGGTAGAGACAAACGTTGCACTGGTGCCTCCCCTC...TGTTTGTAACTCATCATAGAAACATTGTGGTGGGAGGAGAGGGGATAGTCTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp AAATCACAGACTGAGACCTCACATTCTGACCTGGAGTCTCCTCCCCTTCCCCAGTCCATAAAGATAGTCTaGTGGCTCTTCATTAATCCC +
Preference number: 4 (lower is better)
Translates to: KSQTETSHSDLESPPLPQSIKIV*WLFINP
Trigger: GGGATTAATGAAGAGCCACCAGACTATCTTTATGGA...CTGGGGAAGGGGAGGAGACTCCAGGTCAGAATGTGAGGTCTCAGTCTGTGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314845.7
ENST00000458649.6
CDS-3UTR CCA 90 bp ATCCCTGTTGGTTTCAGTGGGGTAAGACGACGAAGAGAGGCTGAAGCTCTGGAAATATTATGGTTCACATaGGTGGAGGCTAAGAGAGTC +
Preference number: 4 (lower is better)
Translates to: IPVGFSGVRRRREAEALEILWFT*VEAKRV
Trigger: GACTCTCTTAGCCTCCACCCATGTGAACCATAATAT...TTCCAGAGCTTCAGCCTCTCTTCGTCGTCTTACCCCACTGAAACCAACAGGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp TGTAGACTATCCCCTCTCCTCCCACCACAATGTTTCTATGATGAGTTACAAACACACTCTCAAAGGAGCTaGGGACCTGCCAAGAGGAAC +
Preference number: 4 (lower is better)
Translates to: CRLSPLLPPQCFYDELQTHSQRS*GPAKRN
Trigger: GTTCCTCTTGGCAGGTCCCCAGCTCCTTTGAGAGTG...TGTTTGTAACTCATCATAGAAACATTGTGGTGGGAGGAGAGGGGATAGTCTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GTACAGTTAAGAGTCCACATGCAACACCTTAAATCACAGACTGAGACCTCACATTCGAGAGGTGGCAACTaGCTGCCACTTGATGGCACA +
Preference number: 4 (lower is better)
Translates to: VQLRVHMQHLKSQTETSHSRGGN*LPLDGT
Trigger: TGTGCCATCAAGTGGCAGCCAGTTGCCACCTCTCGA...ATGTGAGGTCTCAGTCTGTGATTTAAGGTGTTGCATGTGGACTCTTAACTGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GAGATACCCACTTGTTCCTCTATTCACATTAAGCCCACAGTGTGGCTCTCCCGGCAGTTCCAGATCTGCTaGACTGGGTGTAAATTCTTT +
Preference number: 4 (lower is better)
Translates to: EIPTCSSIHIKPTVWLSRQFQIC*TGCKFF
Trigger: AAAGAATTTACACCCAGTCCAGCAGATCTGGAACTG...CCGGGAGAGCCACACTGTGGGCTTAATGTGAATAGAGGAACAAGTGGGTATCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp TGTAGACTATCCCCTCTCCTCCCACCACAATGTTTCTATGATGAGTTACAAACAGTGGAGCTCGGTGCCTaGATCTGTCACCATTGTCCT +
Preference number: 4 (lower is better)
Translates to: CRLSPLLPPQCFYDELQTVELGA*ICHHCP
Trigger: AGGACAATGGTGACAGATCCAGGCACCGAGCTCCAC...TGTTTGTAACTCATCATAGAAACATTGTGGTGGGAGGAGAGGGGATAGTCTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
CDS-3UTR CCA 90 bp GTACAGTTAAGAGTCCACATGCAACACCTTAAATCACAGACTGAGACCTCACATTCAGGAAAGCCCCTCTaGCTGCTGGGGATGAAAGCT +
Preference number: 4 (lower is better)
Translates to: VQLRVHMQHLKSQTETSHSGKPL*LLGMKA
Trigger: AGCTTTCATCCCCAGCAGCCAGAGGGGCTTTCCTGA...ATGTGAGGTCTCAGTCTGTGATTTAAGGTGTTGCATGTGGACTCTTAACTGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GTACAGTTAAGAGTCCACATGCAACACCTTAAATCACAGACTGAGACCTCACATTTGGTCCCTCAGCGCTaGGAAGGGAAACAGGAATGG +
Preference number: 4 (lower is better)
Translates to: VQLRVHMQHLKSQTETSHLVPQR*EGKQEW
Trigger: CCATTCCTGTTTCCCTTCCCAGCGCTGAGGGACCAA...ATGTGAGGTCTCAGTCTGTGATTTAAGGTGTTGCATGTGGACTCTTAACTGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GTACAGTTAAGAGTCCACATGCAACACCTTAAATCACAGACTGAGACCTCACATATTAAGCCCACAGTGTaGCTCTCCCGGGCTCCAGAT +
Preference number: 4 (lower is better)
Translates to: VQLRVHMQHLKSQTETSHIKPTV*LSRAPD
Trigger: ATCTGGAGCCCGGGAGAGCCACACTGTGGGCTTAAT...ATGTGAGGTCTCAGTCTGTGATTTAAGGTGTTGCATGTGGACTCTTAACTGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GTACAGTTAAGAGTCCACATGCAACACCTTAAATCACAGACTGAGACCTCACATAGACTGTTCACTCTCTaGAGGCTCTCTGTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: VQLRVHMQHLKSQTETSHRLFTL*RLSVQG
Trigger: GCCCTGGACAGAGAGCCTCCAGAGAGTGAACAGTCT...ATGTGAGGTCTCAGTCTGTGATTTAAGGTGTTGCATGTGGACTCTTAACTGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp AAATCACAGACTGAGACCTCACATTCTGACCTGGAGTCTCCTCCCCTTCCCCAGTTCATTAGGAGCCAATaGGATAGTCCTTATAACTCT +
Preference number: 4 (lower is better)
Translates to: KSQTETSHSDLESPPLPQFIRSQ*DSPYNS
Trigger: AGAGTTATAAGGACTATCTCATTGGCTCCTAATGAA...CTGGGGAAGGGGAGGAGACTCCAGGTCAGAATGTGAGGTCTCAGTCTGTGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314845.7
ENST00000458649.6
CDS-3UTR TCA 90 bp TGTAGACTATCCCCTCTCCTCCCACCACAATGTTTCTATGATGAGTTACAAACACAACTGGCTGCCACTTaGTGGCACACTCTCAAAGGA +
Preference number: 4 (lower is better)
Translates to: CRLSPLLPPQCFYDELQTQLAAT*WHTLKG
Trigger: TCCTTTGAGAGTGTGCCATCAAGTGGCAGCCAGTTG...TGTTTGTAACTCATCATAGAAACATTGTGGTGGGAGGAGAGGGGATAGTCTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp TGTAGACTATCCCCTCTCCTCCCACCACAATGTTTCTATGATGAGTTACAAACAAGTACACTGCCAGGATaGCTTCATCAGGAAAGCCCC +
Preference number: 4 (lower is better)
Translates to: CRLSPLLPPQCFYDELQTSTLPG*LHQESP
Trigger: GGGGCTTTCCTGATGAAGGCATCCTGGCAGTGTACT...TGTTTGTAACTCATCATAGAAACATTGTGGTGGGAGGAGAGGGGATAGTCTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp TGTAGACTATCCCCTCTCCTCCCACCACAATGTTTCTATGATGAGTTACAAACATCTGTTGGTAGCGCATaGAGCGCTGGCGAATACTGT +
Preference number: 4 (lower is better)
Translates to: CRLSPLLPPQCFYDELQTSVGSA*SAGEYC
Trigger: ACAGTATTCGCCAGCGCTCCATGCGCTACCAACAGA...TGTTTGTAACTCATCATAGAAACATTGTGGTGGGAGGAGAGGGGATAGTCTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
CDS-3UTR CCA 90 bp TGTAGACTATCCCCTCTCCTCCCACCACAATGTTTCTATGATGAGTTACAAACAAACCCCTCCCTTCTGTaGCTGAAGTGTACACAGATG +
Preference number: 4 (lower is better)
Translates to: CRLSPLLPPQCFYDELQTNPSLL*LKCTQM
Trigger: CATCTGTGTACACTTCAGCCACAGAAGGGAGGGGTT...TGTTTGTAACTCATCATAGAAACATTGTGGTGGGAGGAGAGGGGATAGTCTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GTACAGTTAAGAGTCCACATGCAACACCTTAAATCACAGACTGAGACCTCACATGAAGGTGGTTGTTATTaGTCAACTCGCAGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: VQLRVHMQHLKSQTETSHEGGCY*STRSGG
Trigger: CCCTCCACTGCGAGTTGACCAATAACAACCACCTTC...ATGTGAGGTCTCAGTCTGTGATTTAAGGTGTTGCATGTGGACTCTTAACTGTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp GTACAGTTAAGAGTCCACATGCAACACCTTAAATCACAGACTGAGACCTCACATAACGGGATAATGAAATaGGGGAAGATTCCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: VQLRVHMQHLKSQTETSHNGIMK*GKIPAA
Trigger: GGCTGCTGGAATCTTCCCTCATTTCATTATCCCGTT...ATGTGAGGTCTCAGTCTGTGATTTAAGGTGTTGCATGTGGACTCTTAACTGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000534300.5
CDS-3UTR TCA 90 bp TGTAGACTATCCCCTCTCCTCCCACCACAATGTTTCTATGATGAGTTACAAACATGGGATAAAGGACGTTaGAAACTCTCCTCATGGAGG +
Preference number: 4 (lower is better)
Translates to: CRLSPLLPPQCFYDELQTWDKGR*KLSSWR
Trigger: CCTCCATGAGGAGAGTTTTCAACGTCCTTTATCCCA...TGTTTGTAACTCATCATAGAAACATTGTGGTGGGAGGAGAGGGGATAGTCTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR GCA 90 bp GTACAGTTAAGAGTCCACATGCAACACCTTAAATCACAGACTGAGACCTCACATTCCCCCATTAGTAAATaGCGAAGTCCCTGTCCTCAA +
Preference number: 4 (lower is better)
Translates to: VQLRVHMQHLKSQTETSHSPISK*RSPCPQ
Trigger: TTGAGGACAGGGACTTCGGCATTTACTAATGGGGGA...ATGTGAGGTCTCAGTCTGTGATTTAAGGTGTTGCATGTGGACTCTTAACTGTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp TGTAGACTATCCCCTCTCCTCCCACCACAATGTTTCTATGATGAGTTACAAACATACATATCTGCCCATTaGGGACAGGCTCACCGAAAT +
Preference number: 4 (lower is better)
Translates to: CRLSPLLPPQCFYDELQTYISAH*GQAHRN
Trigger: ATTTCGGTGAGCCTGTCCCCAATGGGCAGATATGTA...TGTTTGTAACTCATCATAGAAACATTGTGGTGGGAGGAGAGGGGATAGTCTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GTACAGTTAAGAGTCCACATGCAACACCTTAAATCACAGACTGAGACCTCACATCCACCATCCAGAAGGTaGTTGTTATTGGTCAACTCG +
Preference number: 4 (lower is better)
Translates to: VQLRVHMQHLKSQTETSHPPSRR*LLLVNS
Trigger: CGAGTTGACCAATAACAACCACCTTCTGGATGGTGG...ATGTGAGGTCTCAGTCTGTGATTTAAGGTGTTGCATGTGGACTCTTAACTGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR TCA 90 bp TGTAGACTATCCCCTCTCCTCCCACCACAATGTTTCTATGATGAGTTACAAACAAGAAGCAATAAGGCCTaGGATGGTGGGATGAAAAGT +
Preference number: 4 (lower is better)
Translates to: CRLSPLLPPQCFYDELQTRSNKA*DGGMKS
Trigger: ACTTTTCATCCCACCATCTCAGGCCTTATTGCTTCT...TGTTTGTAACTCATCATAGAAACATTGTGGTGGGAGGAGAGGGGATAGTCTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp TGTAGACTATCCCCTCTCCTCCCACCACAATGTTTCTATGATGAGTTACAAACAATTCTGTTCCATCTATaGGGATCTCTGGTTCGTCAT +
Preference number: 4 (lower is better)
Translates to: CRLSPLLPPQCFYDELQTILFHL*GSLVRH
Trigger: ATGACGAACCAGAGATCCCCATAGATGGAACAGAAT...TGTTTGTAACTCATCATAGAAACATTGTGGTGGGAGGAGAGGGGATAGTCTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GTACAGTTAAGAGTCCACATGCAACACCTTAAATCACAGACTGAGACCTCACATCAGAAATGTCACAGCTaGCATCATTGTAGATCTTGC +
Preference number: 4 (lower is better)
Translates to: VQLRVHMQHLKSQTETSHQKCHS*HHCRSC
Trigger: GCAAGATCTACAATGATGCCAGCTGTGACATTTCTG...ATGTGAGGTCTCAGTCTGTGATTTAAGGTGTTGCATGTGGACTCTTAACTGTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CCA 90 bp GTACAGTTAAGAGTCCACATGCAACACCTTAAATCACAGACTGAGACCTCACATTCCATAAAGATAGTCTaGTGGCTCTTCATTAATCCC +
Preference number: 4 (lower is better)
Translates to: VQLRVHMQHLKSQTETSHSIKIV*WLFINP
Trigger: GGGATTAATGAAGAGCCACCAGACTATCTTTATGGA...ATGTGAGGTCTCAGTCTGTGATTTAAGGTGTTGCATGTGGACTCTTAACTGTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314845.7
ENST00000458649.6
CDS CCA 90 bp GAGGGCAGGGTTGGCTGGGTTGGCTCCCGCCCAGGGGTACCAGGCTaGTCCCAGGAAGCTGTCCGGGGGCTTAGGCCTCGCTCTGCCAGT +
Preference number: 5 (lower is better)
Translates to: EGRVGWVGSRPGVPG*SQEAVRGLRPRSAS
Trigger: ACTGGCAGAGCGAGGCCTAAGCCCCCGGACAGCTTCCTGGGACCAGCCTGGTACCCCTGGGCGGGAGCCAACCCAGCCAACCCTGCCCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000526545.5
ENST00000528950.1
ENST00000533727.5
ENST00000534300.5
ENST00000683756.1
CDS TCA 90 bp TTGCCCGGCCTCTGGGAGCAGTCCCCGAGAGGTGGAGGGCTGGGGTaGGGAGGTGTGGGCGGCACCAGGTTCAGTGCCCGTCTGAGAGCT +
Preference number: 5 (lower is better)
Translates to: LPGLWEQSPRGGGLG*GGVGGTRFSARLRA
Trigger: AGCTCTCAGACGGGCACTGAACCTGGTGCCGCCCACACCTCCTCACCCCAGCCCTCCACCTCTCGGGGACTGCTCCCAGAGGCCGGGCAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000526545.5
ENST00000528950.1
ENST00000533727.5
ENST00000534300.5
ENST00000683756.1
CDS TCA 90 bp ATAAAGGAAGGGGTCCGTTCTACCGACCGGCAGGAGAAGGCGGCTTaGGCGCGGGGCCTCGCGGACAACTCAGCCCTCGACCCGGCGCCG +
Preference number: 5 (lower is better)
Translates to: IKEGVRSTDRQEKAA*ARGLADNSALDPAP
Trigger: CGGCGCCGGGTCGAGGGCTGAGTTGTCCGCGAGGCCCCGCGCTCAAGCCGCCTTCTCCTGCCGGTCGGTAGAACGGACCCCTTCCTTTAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000526606.1
ENST00000528950.1
ENST00000531542.1
ENST00000534300.5
ENST00000683756.1
CDS GCA 90 bp GACGGCCGGTTCAGGAGGCCCTGGTCCTGCTGCGTTGACGAGGCCTaGTCCGGGGGATGGAAGGGCTCGGTCTGGATGCCAGAAGAGCGG +
Preference number: 5 (lower is better)
Translates to: DGRFRRPWSCCVDEA*SGGWKGSVWMPEER
Trigger: CCGCTCTTCTGGCATCCAGACCGAGCCCTTCCATCCCCCGGAGCAGGCCTCGTCAACGCAGCAGGACCAGGGCCTCCTGAACCGGCCGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314845.7
ENST00000533727.5
CDS-3UTR CAA 90 bp GGAGGTGGTGTCTGGGTTCCTGGTGGCTCTGCCCACCCAACAGGTGGACAGGGCCCTGGTCCTGCTGCGTaGACGAGGCCTGCTCCGGGG +
Preference number: 5 (lower is better)
Translates to: GGGVWVPGGSAHPTGGQGPGPAA*TRPAPG
Trigger: CCCCGGAGCAGGCCTCGTCAACGCAGCAGGACCAGG...GCCCTGTCCACCTGTTGGGTGGGCAGAGCCACCAGGAACCCAGACACCACCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS TCA 90 bp ACTGAAGGCAGACGGCCGGTTCAGGAGGCCCTGGTCCTGCTGCGTTaGCGAGGCCTGCTCCGGGGGATGGAAGGGCTCGGTCTGGATGCC +
Preference number: 5 (lower is better)
Translates to: TEGRRPVQEALVLLR*RGLLRGMEGLGLDA
Trigger: GGCATCCAGACCGAGCCCTTCCATCCCCCGGAGCAGGCCTCGTCAACGCAGCAGGACCAGGGCCTCCTGAACCGGCCGTCTGCCTTCAGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314845.7
ENST00000533727.5
CDS GCA 90 bp TTGCCGAAGCCGCCCATGGAGGCCATGGTGGTGCTCTGCTCCCGCTaGACCACGGCTGTCATGCCGCCCTCCGCCATCAGCCTCTGGATC +
Preference number: 5 (lower is better)
Translates to: LPKPPMEAMVVLCSR*TTAVMPPSAISLWI
Trigger: GATCCAGAGGCTGATGGCGGAGGGCGGCATGACAGCCGTGGTGCAGCGGGAGCAGAGCACCACCATGGCCTCCATGGGCGGCTTCGGCAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000526545.5
ENST00000528950.1
ENST00000533727.5
ENST00000534300.5
ENST00000683756.1
CDS-3UTR CAA 90 bp GGAGGTGGTGTCTGGGTTCCTGGTGGCTCTGCCCACCCAACAGGTGGACAGGGCGCTGGAGCTGGGCGTTaGGCCCTCAGTCCGCTCGAG +
Preference number: 5 (lower is better)
Translates to: GGGVWVPGGSAHPTGGQGAGAGR*ALSPLE
Trigger: CTCGAGCGGACTGAGGGCCAAACGCCCAGCTCCAGC...GCCCTGTCCACCTGTTGGGTGGGCAGAGCCACCAGGAACCCAGACACCACCTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CAA 90 bp GGAGGTGGTGTCTGGGTTCCTGGTGGCTCTGCCCACCCAACAGGTGGACAGGGCAGGAAGAGGGCAGGGTaGGCTGGGTTGGCTCCCGCC +
Preference number: 5 (lower is better)
Translates to: GGGVWVPGGSAHPTGGQGRKRAG*AGLAPA
Trigger: GGCGGGAGCCAACCCAGCCAACCCTGCCCTCTTCCT...GCCCTGTCCACCTGTTGGGTGGGCAGAGCCACCAGGAACCCAGACACCACCTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS GCA 90 bp ACTGTACTGAAGGCAGACGGCCGGTTCAGGAGGCCCTGGTCCTGCTaGGTTGACGAGGCCTGCTCCGGGGGATGGAAGGGCTCGGTCTGG +
Preference number: 5 (lower is better)
Translates to: TVLKADGRFRRPWSC*VDEACSGGWKGSVW
Trigger: CCAGACCGAGCCCTTCCATCCCCCGGAGCAGGCCTCGTCAACGCAGCAGGACCAGGGCCTCCTGAACCGGCCGTCTGCCTTCAGTACAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314845.7
ENST00000533727.5
CDS GCA 90 bp TGGACTGTACTGAAGGCAGACGGCCGGTTCAGGAGGCCCTGGTCCTaGTGCGTTGACGAGGCCTGCTCCGGGGGATGGAAGGGCTCGGTC +
Preference number: 5 (lower is better)
Translates to: WTVLKADGRFRRPWS*CVDEACSGGWKGSV
Trigger: GACCGAGCCCTTCCATCCCCCGGAGCAGGCCTCGTCAACGCAGCAGGACCAGGGCCTCCTGAACCGGCCGTCTGCCTTCAGTACAGTCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000528950.1
ENST00000533727.5
ENST00000534300.5
ENST00000683756.1
CDS CCA 90 bp CTGCTCTGGACTGTACTGAAGGCAGACGGCCGGTTCAGGAGGCCCTaGTCCTGCTGCGTTGACGAGGCCTGCTCCGGGGGATGGAAGGGC +
Preference number: 5 (lower is better)
Translates to: LLWTVLKADGRFRRP*SCCVDEACSGGWKG
Trigger: GCCCTTCCATCCCCCGGAGCAGGCCTCGTCAACGCAGCAGGACCAGGGCCTCCTGAACCGGCCGTCTGCCTTCAGTACAGTCCAGAGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000528950.1
ENST00000533727.5
ENST00000534300.5
ENST00000683756.1
CDS-3UTR CAA 90 bp GCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTGCCTCGCTCTGCCAGTaGCCCGGCCTCTGGGAGCAG +
Preference number: 5 (lower is better)
Translates to: AVRSGFCLAVRGEAPVQRASLCQ*PGLWEQ
Trigger: CTGCTCCCAGAGGCCGGGCAACTGGCAGAGCGAGGC...ACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000526545.5
ENST00000533727.5
ENST00000534300.5
CDS GCA 90 bp ACTGTACTGAAGGCAGACGGCCGGTTCAGGAGGCCCTGGTCCTGCTaGGTTGACGAGGCCTGCTCCGGGGGATGGAAGGGCTCGGTCTGT +
Preference number: 5 (lower is better)
Translates to: TVLKADGRFRRPWSC*VDEACSGGWKGSVC
Trigger: ACAGACCGAGCCCTTCCATCCCCCGGAGCAGGCCTCGTCAACGCAGCAGGACCAGGGCCTCCTGAACCGGCCGTCTGCCTTCAGTACAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000458649.6
ENST00000528950.1
ENST00000534300.5
ENST00000683756.1
CDS CCA 90 bp GGACCCAGACTGAGGTTGCGGAGCGTGTTGCCGGCAGTGCTGCTCTaGACTGTACTGAAGGCAGACGGCCGGTTCAGGAGGCCCTGGTCC +
Preference number: 5 (lower is better)
Translates to: GPRLRLRSVLPAVLL*TVLKADGRFRRPWS
Trigger: GGACCAGGGCCTCCTGAACCGGCCGTCTGCCTTCAGTACAGTCCAGAGCAGCACTGCCGGCAACACGCTCCGCAACCTCAGTCTGGGTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000528950.1
ENST00000533727.5
ENST00000534300.5
ENST00000683756.1
CDS-3UTR CAA 90 bp GTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGGCCTCGCTCTGCCAGTaGCCCGGCCTCTGGGAGCAG +
Preference number: 5 (lower is better)
Translates to: VRSGFCLAVRGEAPVQRLASLCQ*PGLWEQ
Trigger: CTGCTCCCAGAGGCCGGGCAACTGGCAGAGCGAGGC...CAAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000526545.5
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CAA 90 bp AGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGAGGAAGAGGGCAGGGTaGGCTGGGTTGGCTCCCGCC +
Preference number: 5 (lower is better)
Translates to: SCEVRFLLGGSRGGTSATRKRAG*AGLAPA
Trigger: GGCGGGAGCCAACCCAGCCAACCCTGCCCTCTTCCT...CGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000526545.5
ENST00000533727.5
ENST00000534300.5
CDS TCA 90 bp ACTGAAGGCAGACGGCCGGTTCAGGAGGCCCTGGTCCTGCTGCGTTaGCGAGGCCTGCTCCGGGGGATGGAAGGGCTCGGTCTGTACAAA +
Preference number: 5 (lower is better)
Translates to: TEGRRPVQEALVLLR*RGLLRGMEGLGLYK
Trigger: TTTGTACAGACCGAGCCCTTCCATCCCCCGGAGCAGGCCTCGTCAACGCAGCAGGACCAGGGCCTCCTGAACCGGCCGTCTGCCTTCAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000458649.6
ENST00000528950.1
ENST00000534300.5
ENST00000683756.1
CDS-3UTR CAA 90 bp CTGCCTCGCGGGCCTCTGTCCAGGATGATTGGCCCAGATCTGGAAGACTGTTCACCTGGTCCTGCTGCGTaGACGAGGCCTGCTCCGGGG +
Preference number: 5 (lower is better)
Translates to: LPRGPLSRMIGPDLEDCSPGPAA*TRPAPG
Trigger: CCCCGGAGCAGGCCTCGTCAACGCAGCAGGACCAGG...TGAACAGTCTTCCAGATCTGGGCCAATCATCCTGGACAGAGGCCCGCGAGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CAA 90 bp GTGGTGTCTGGGTTCCTGGTGGCTCTGCCCACCCAACAGGTGGACAGGGCAAAGGGACCCAGACTGAGGTaGCGGAGCGTGTTGCCGGCA +
Preference number: 5 (lower is better)
Translates to: VVSGFLVALPTQQVDRAKGPRLR*RSVLPA
Trigger: TGCCGGCAACACGCTCCGCAACCTCAGTCTGGGTCC...CTTTGCCCTGTCCACCTGTTGGGTGGGCAGAGCCACCAGGAACCCAGACACCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CAA 90 bp TCCAGTTCCCAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCTGGAGCTGGGCGTTaGGCCCTCAGTCCGCTCGAG +
Preference number: 5 (lower is better)
Translates to: SSSQSAVRSGFCLAVRGEAGAGR*ALSPLE
Trigger: CTCGAGCGGACTGAGGGCCAAACGCCCAGCTCCAGC...CTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGACTGGGAACTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CAA 90 bp GTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGAGGAAGAGGGCAGGGTaGGCTGGGTTGGCTCCCGCC +
Preference number: 5 (lower is better)
Translates to: VRSGFCLAVRGEAPVQRLRKRAG*AGLAPA
Trigger: GGCGGGAGCCAACCCAGCCAACCCTGCCCTCTTCCT...CAAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000526545.5
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CAA 90 bp GAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGTCAGGAAGAGGGCAGGGTaGGCTGGGTTGGCTCCCGCC +
Preference number: 5 (lower is better)
Translates to: EVRFLLGGSRGGTSATFVRKRAG*AGLAPA
Trigger: GGCGGGAGCCAACCCAGCCAACCCTGCCCTCTTCCT...GACAAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000526545.5
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CAA 90 bp GTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAGCTGCTCTGAGGGCCTaGCGGGGAGAAGACTGGTGG +
Preference number: 5 (lower is better)
Translates to: VSCEVRFLLGGSRGGTSAAALRA*RGEDWW
Trigger: CCACCAGTCTTCTCCCCGCAAGGCCCTCAGAGCAGC...TGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS GCA 90 bp TCTCCACCATGGGCCTGTTGCAGCCTGAAGACCTGGGCCACCATGTaGTCTGTGGAGGGGTGCAGCAGGATCCTTCGTGAGGCCAAGCCC +
Preference number: 5 (lower is better)
Translates to: SPPWACCSLKTWATM*SVEGCSRILREAKP
Trigger: GGGCTTGGCCTCACGAAGGATCCTGCTGCACCCCTCCACAGAGCACATGGTGGCCCAGGTCTTCAGGCTGCAACAGGCCCATGGTGGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000528950.1
ENST00000533727.5
ENST00000534300.5
ENST00000683756.1
CDS CCA 90 bp CTGGAGCTGGGCGTTTGGCCCTCAGTCCGCTCGAGAGGTGGCAACTaGCTGCCACTTGATGGCACACTCTCAAAGGAGCTGGGGACCTGC +
Preference number: 5 (lower is better)
Translates to: LELGVWPSVRSRGGN*LPLDGTLSKELGTC
Trigger: GCAGGTCCCCAGCTCCTTTGAGAGTGTGCCATCAAGTGGCAGCCAGTTGCCACCTCTCGAGCGGACTGAGGGCCAAACGCCCAGCTCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000528950.1
ENST00000533727.5
ENST00000534300.5
ENST00000683756.1
CDS-3UTR CAA 90 bp AAATGCCGAAGTCCCTGTCCTCAAGAATCTGGGAGCCTGGCCCGATCCCTGTTGCCTGGTCCTGCTGCGTaGACGAGGCCTGCTCCGGGG +
Preference number: 5 (lower is better)
Translates to: KCRSPCPQESGSLARSLLPGPAA*TRPAPG
Trigger: CCCCGGAGCAGGCCTCGTCAACGCAGCAGGACCAGG...CAACAGGGATCGGGCCAGGCTCCCAGATTCTTGAGGACAGGGACTTCGGCATTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CAA 90 bp TCAGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAAAGGTTGCGGAGCGTGTaGCCGGCAGTGCTGCTCTGG +
Preference number: 5 (lower is better)
Translates to: SAVRSGFCLAVRGEAPVQRLRSV*PAVLLW
Trigger: CCAGAGCAGCACTGCCGGCAACACGCTCCGCAACCT...TTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CAA 90 bp GTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTTTGGCAGACATCCGGGCATaGCGTGGAGCTCGGTGCCTG +
Preference number: 5 (lower is better)
Translates to: VRSGFCLAVRGEAPVQRLADIRA*RGARCL
Trigger: CAGGCACCGAGCTCCACGCAATGCCCGGATGTCTGC...CAAACGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CAA 90 bp AGCTGTGAGGTCCGGTTTCTGCTTGGCGGTTCGAGGGGAGGCACCAGTGCAACGTCCACCATGGGCCTGTaGCAGCCTGAAGACCTGGGC +
Preference number: 5 (lower is better)
Translates to: SCEVRFLLGGSRGGTSATSTMGL*QPEDLG
Trigger: GCCCAGGTCTTCAGGCTGCAACAGGCCCATGGTGGA...CGTTGCACTGGTGCCTCCCCTCGAACCGCCAAGCAGAAACCGGACCTCACAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CAA 90 bp GCTCTTCCACATGTCCAGTTCCCAGTCAGCTGTGAGGTCCGGTTTCTGCTTGGCGCCTCGCTCTGCCAGTaGCCCGGCCTCTGGGAGCAG +
Preference number: 5 (lower is better)
Translates to: ALPHVQFPVSCEVRFLLGASLCQ*PGLWEQ
Trigger: CTGCTCCCAGAGGCCGGGCAACTGGCAGAGCGAGGC...GCCAAGCAGAAACCGGACCTCACAGCTGACTGGGAACTGGACATGTGGAAGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CAA 90 bp AAATGCCGAAGTCCCTGTCCTCAAGAATCTGGGAGCCTGGCCCGATCCCTGTTGGCCTCGCTCTGCCAGTaGCCCGGCCTCTGGGAGCAG +
Preference number: 5 (lower is better)
Translates to: KCRSPCPQESGSLARSLLASLCQ*PGLWEQ
Trigger: CTGCTCCCAGAGGCCGGGCAACTGGCAGAGCGAGGC...CAACAGGGATCGGGCCAGGCTCCCAGATTCTTGAGGACAGGGACTTCGGCATTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314845.7
ENST00000458649.6
ENST00000533727.5
ENST00000534300.5
CDS-3UTR CA