RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AMACR (Homo sapiens)

Ensembl gene IDs: ENSG00000242110

Ensembl transcript IDs: ENST00000335606.11, ENST00000382068.3, ENST00000382072.6, ENST00000382085.7, ENST00000426255.6, ENST00000502637.5, ENST00000506639.5, ENST00000512079.5, ENST00000514195.1

Found 361 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TTCTCCCTGAGGTATTACTGCCAGTGTCTATGTCTCCAAGGTGGGTaGAGCAACTTTGGCTTCTGGGTCCAAGTACACCAGCTTTCCCAT +
Preference number: 1 (lower is better)
Translates to: FSLRYYCQCLCLQGG*SNFGFWVQVHQLSH
Trigger: ATGGGAAAGCTGGTGTACTTGGACCCAGAAGCCAAAGTTGCTGCACCCACCTTGGAGACATAGACACTGGCAGTAATACCTCAGGGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335606.11
3UTR GCA 90 bp GAACAACCTCCTCAAAAGTCAGAACCGGAGTCACACAGGCATCTGTaGCGTCAAAGATTTGACACCACTCTGCCTTCGTCTTCTCTGCAA +
Preference number: 1 (lower is better)
Translates to: EQPPQKSEPESHRHL*RQRFDTTLPSSSLQ
Trigger: TTGCAGAGAAGACGAAGGCAGAGTGGTGTCAAATCTTTGACGGCACAGATGCCTGTGTGACTCCGGTTCTGACTTTTGAGGAGGTTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382072.6
ENST00000506639.5
3UTR CCA 90 bp TTTCTTCTCCCTGAGGTATTACTGCCAGTGTCTATGTCTCCAAGGTaGGTGCAGCAACTTTGGCTTCTGGGTCCAAGTACACCAGCTTTC +
Preference number: 1 (lower is better)
Translates to: FLLPEVLLPVSMSPR*VQQLWLLGPSTPAF
Trigger: GAAAGCTGGTGTACTTGGACCCAGAAGCCAAAGTTGCTGCACCCACCTTGGAGACATAGACACTGGCAGTAATACCTCAGGGAGAAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335606.11
3UTR CCA 90 bp CTTCCTCTTGCGATTGTTGAACGGCAGTTGAGATACTGCGCAGAATaGACCTTATTGATGGCCTACCCAACATCCATTCTCTACTCCCTC +
Preference number: 1 (lower is better)
Translates to: LPLAIVERQLRYCAE*TLLMAYPTSILYSL
Trigger: GAGGGAGTAGAGAATGGATGTTGGGTAGGCCATCAATAAGGTCCATTCTGCGCAGTATCTCAACTGCCGTTCAACAATCGCAAGAGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335606.11
ENST00000382072.6
3UTR TCA 90 bp AAAGTCAGAACCGGAGTCACACAGGCATCTGTGCCGTCAAAGATTTaGCACCACTCTGCCTTCGTCTTCTCTGCAAATACATCTGCAAAC +
Preference number: 1 (lower is better)
Translates to: KVRTGVTQASVPSKI*HHSAFVFSANTSAN
Trigger: GTTTGCAGATGTATTTGCAGAGAAGACGAAGGCAGAGTGGTGTCAAATCTTTGACGGCACAGATGCCTGTGTGACTCCGGTTCTGACTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382072.6
ENST00000506639.5
3UTR TCA 90 bp GAAGGAAAGAAGCCAGGATATTTCCCTAGATTTCTTTCTTCTCCCTaGGGTATTACTGCCAGTGTCTATGTCTCCAAGGTGGGTGCAGCA +
Preference number: 1 (lower is better)
Translates to: EGKKPGYFPRFLSSP*GITASVYVSKVGAA
Trigger: TGCTGCACCCACCTTGGAGACATAGACACTGGCAGTAATACCTCAGGGAGAAGAAAGAAATCTAGGGAAATATCCTGGCTTCTTTCCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335606.11
3UTR CCA 90 bp ACACACTGCATTTTGTGCTGCCTGTCTGCTCAGATCTATTTCCTTTaGTGCTCTTTATCTTATGGGGCTACATTTCCAGGGTTCCCTTGT +
Preference number: 1 (lower is better)
Translates to: THCILCCLSAQIYFL*CSLSYGATFPGFPC
Trigger: ACAAGGGAACCCTGGAAATGTAGCCCCATAAGATAAAGAGCACCAAAGGAAATAGATCTGAGCAGACAGGCAGCACAAAATGCAGTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335606.11
3UTR GCA 90 bp CACTGCATTTTGTGCTGCCTGTCTGCTCAGATCTATTTCCTTTGGTaGTCTTTATCTTATGGGGCTACATTTCCAGGGTTCCCTTGTTTT +
Preference number: 1 (lower is better)
Translates to: HCILCCLSAQIYFLW*SLSYGATFPGFPCF
Trigger: AAAACAAGGGAACCCTGGAAATGTAGCCCCATAAGATAAAGAGCACCAAAGGAAATAGATCTGAGCAGACAGGCAGCACAAAATGCAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335606.11
3UTR GCA 90 bp ATCTGTGCCGTCAAAGATTTGACACCACTCTGCCTTCGTCTTCTCTaGAAATACATCTGCAAACTTCTTCTTCATTTCTGGCCAATCATC +
Preference number: 1 (lower is better)
Translates to: ICAVKDLTPLCLRLL*KYICKLLLHFWPII
Trigger: GATGATTGGCCAGAAATGAAGAAGAAGTTTGCAGATGTATTTGCAGAGAAGACGAAGGCAGAGTGGTGTCAAATCTTTGACGGCACAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382072.6
ENST00000506639.5
3UTR TCA 90 bp GTGATAACTGTTGCTAAAGTTTGGAATGTGCTTAGAGGGAGATCATaGACACCAAGACAAAAGGCCTGGATGCAACCAATCACTCTGTTT +
Preference number: 1 (lower is better)
Translates to: VITVAKVWNVLRGRS*TPRQKAWMQPITLF
Trigger: AAACAGAGTGATTGGTTGCATCCAGGCCTTTTGTCTTGGTGTTCATGATCTCCCTCTAAGCACATTCCAAACTTTAGCAACAGTTATCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000506639.5
3UTR GCA 90 bp TTTATTTCTGGATGTTGCTGTGTGTTGGGTATAAGATCCAGAACTTaGTACCAGCCTGAGGAGAAATCAAACACATGGAGAAAGGAAAGC +
Preference number: 1 (lower is better)
Translates to: FISGCCCVLGIRSRT*YQPEEKSNTWRKES
Trigger: GCTTTCCTTTCTCCATGTGTTTGATTTCTCCTCAGGCTGGTAGCAAGTTCTGGATCTTATACCCAACACACAGCAACATCCAGAAATAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000506639.5
3UTR GCA 90 bp AAAGATTTGACACCACTCTGCCTTCGTCTTCTCTGCAAATACATCTaGAAACTTCTTCTTCATTTCTGGCCAATCATCCATGCTCATCTG +
Preference number: 1 (lower is better)
Translates to: KDLTPLCLRLLCKYI*KLLLHFWPIIHAHL
Trigger: CAGATGAGCATGGATGATTGGCCAGAAATGAAGAAGAAGTTTGCAGATGTATTTGCAGAGAAGACGAAGGCAGAGTGGTGTCAAATCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382072.6
ENST00000506639.5
3UTR TCA 90 bp TCTGCAAACTTCTTCTTCATTTCTGGCCAATCATCCATGCTCATCTaGTTGGGAAGTTCATCAGACTTTAGTCCAAGTCCTGATTGTACT +
Preference number: 1 (lower is better)
Translates to: SANFFFISGQSSMLI*LGSSSDFSPSPDCT
Trigger: AGTACAATCAGGACTTGGACTAAAGTCTGATGAACTTCCCAATCAGATGAGCATGGATGATTGGCCAGAAATGAAGAAGAAGTTTGCAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506639.5
3UTR-3UTR GCA 90 bp GGGATGGCTGGGGTGTTTAACAGCAGAGGTGCAGGGCGGGGGCTCACGTCCTGCCTGGCCAATCATCCATaGTCATCTGATTGGGAAGTT +
Preference number: 2 (lower is better)
Translates to: GMAGVFNSRGAGRGLTSCLANHP*SSDWEV
Trigger: AACTTCCCAATCAGATGAGCATGGATGATTGGCCAG...GCAGGACGTGAGCCCCCGCCCTGCACCTCTGCTGTTAAACACCCCAGCCATCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382072.6
ENST00000506639.5
3UTR-3UTR TCA 90 bp GAGAAAGGAAAGCTGACAGCCCAGAGACCCACGGGGAAACAGGCCCCGAGTTACGTGCCGTCAAAGATTTaGCACCACTCTGCCTTCGTC +
Preference number: 2 (lower is better)
Translates to: EKGKLTAQRPTGKQAPSYVPSKI*HHSAFV
Trigger: GACGAAGGCAGAGTGGTGTCAAATCTTTGACGGCAC...GTAACTCGGGGCCTGTTTCCCCGTGGGTCTCTGGGCTGTCAGCTTTCCTTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382072.6
ENST00000506639.5
3UTR-3UTR GCA 90 bp GGATGGCTGGGGTGTTTAACAGCAGAGGTGCAGGGCGGGGGCTCACGTCCTGCTCTGGCCAATCATCCATaGTCATCTGATTGGGAAGTT +
Preference number: 2 (lower is better)
Translates to: GWLGCLTAEVQGGGSRPALANHP*SSDWEV
Trigger: AACTTCCCAATCAGATGAGCATGGATGATTGGCCAG...AGCAGGACGTGAGCCCCCGCCCTGCACCTCTGCTGTTAAACACCCCAGCCATCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382072.6
ENST00000506639.5
3UTR-3UTR TCA 90 bp GAGAAAGGAAAGCTGACAGCCCAGAGACCCACGGGGAAACAGGCCCCGAGTTACCTTAGAGGGAGATCATaGACACCAAGACAAAAGGCC +
Preference number: 2 (lower is better)
Translates to: EKGKLTAQRPTGKQAPSYLRGRS*TPRQKA
Trigger: GGCCTTTTGTCTTGGTGTTCATGATCTCCCTCTAAG...GTAACTCGGGGCCTGTTTCCCCGTGGGTCTCTGGGCTGTCAGCTTTCCTTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000506639.5
3UTR-3UTR GCA 90 bp AAGCTGACAGCCCAGAGACCCACGGGGAAACAGGCCCCGAGTTACTGGATACAGTCACACAGGCATCTGTaGCGTCAAAGATTTGACACC +
Preference number: 2 (lower is better)
Translates to: KLTAQRPTGKQAPSYWIQSHRHL*RQRFDT
Trigger: GGTGTCAAATCTTTGACGGCACAGATGCCTGTGTGA...CTGTATCCAGTAACTCGGGGCCTGTTTCCCCGTGGGTCTCTGGGCTGTCAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382072.6
ENST00000506639.5
3UTR-3UTR GCA 90 bp TTATTGATGGCCTACCCAACATCCATTCTCTACTCCCTCTACTCTGATGGCACCCGGGGGCTCACGTCCTaGTCCTCACTGGTGATAAAC +
Preference number: 2 (lower is better)
Translates to: LLMAYPTSILYSLYSDGTRGLTS*SSLVIN
Trigger: GTTTATCACCAGTGAGGAGCAGGACGTGAGCCCCCG...GGTGCCATCAGAGTAGAGGGAGTAGAGAATGGATGTTGGGTAGGCCATCAATAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382072.6
3UTR-3UTR GCA 90 bp CTCAGTGTGTTCTCCTATGAAAGGATCCCTTTTGAAAGAAGGGATGGCTGGGGTCGGGGGCTCACGTCCTaGTCCTCACTGGTGATAAAC +
Preference number: 2 (lower is better)
Translates to: LSVFSYERIPFERRDGWGRGLTS*SSLVIN
Trigger: GTTTATCACCAGTGAGGAGCAGGACGTGAGCCCCCG...ACCCCAGCCATCCCTTCTTTCAAAAGGGATCCTTTCATAGGAGAACACACTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000382072.6
ENST00000506639.5
3UTR-3UTR TCA 90 bp AAAGGAAAGCTGACAGCCCAGAGACCCACGGGGAAACAGGCCCCGAGTTACTGGCAGTTGAAGGCATTCTaGTTCAATACAGGTGAAACT +
Preference number: 2 (lower is better)
Translates to: KGKLTAQRPTGKQAPSYWQLKAF*FNTGET
Trigger: AGTTTCACCTGTATTGAATCAGAATGCCTTCAACTG...CCAGTAACTCGGGGCCTGTTTCCCCGTGGGTCTCTGGGCTGTCAGCTTTCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000506639.5
3UTR-3UTR TCA 90 bp AAGTCAGAACCGGAGTCACACAGGCATCTGTGCCGTCAAAGATTTGACACCACTGTGCCGTCAAAGATTTaGCACCACTCTGCCTTCGTC +
Preference number: 2 (lower is better)
Translates to: KSEPESHRHLCRQRFDTTVPSKI*HHSAFV
Trigger: GACGAAGGCAGAGTGGTGTCAAATCTTTGACGGCAC...AGTGGTGTCAAATCTTTGACGGCACAGATGCCTGTGTGACTCCGGTTCTGACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382072.6
ENST00000506639.5
3UTR-3UTR CCA 90 bp GAGAAAGGAAAGCTGACAGCCCAGAGACCCACGGGGAAACAGGCCCCGAGTTACACTGTTGCTAAAGTTTaGAATGTGCTTAGAGGGAGA +
Preference number: 2 (lower is better)
Translates to: EKGKLTAQRPTGKQAPSYTVAKV*NVLRGR
Trigger: TCTCCCTCTAAGCACATTCCAAACTTTAGCAACAGT...GTAACTCGGGGCCTGTTTCCCCGTGGGTCTCTGGGCTGTCAGCTTTCCTTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000506639.5
3UTR-3UTR CCA 90 bp GTTGAGTCCAGGGAAGCTCCAGGAGCAGGCTGGTTTTATGTAAAGACAATCCCGCTTGAGCCGTGGGCCTaGAAGTTAGAGACTAGCTTT +
Preference number: 2 (lower is better)
Translates to: VESREAPGAGWFYVKTIPLEPWA*KLETSF
Trigger: AAAGCTAGTCTCTAACTTCCAGGCCCACGGCTCAAG...CGGGATTGTCTTTACATAAAACCAGCCTGCTCCTGGAGCTTCCCTGGACTCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382072.6
ENST00000506639.5
3UTR-3UTR TCA 90 bp CCCGAGTTACTGGATACAGGCAACCCTAAAACTGACTGTCCCTCTGGACTCTACGTATTCAAATTCACTTaGGCCGTGGGCCTGGAAGTT +
Preference number: 2 (lower is better)
Translates to: PELLDTGNPKTDCPSGLYVFKFT*AVGLEV
Trigger: AACTTCCAGGCCCACGGCTCAAGTGAATTTGAATAC...GTAGAGTCCAGAGGGACAGTCAGTTTTAGGGTTGCCTGTATCCAGTAACTCGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382072.6
ENST00000506639.5
3UTR-3UTR GCA 90 bp GCCCAGAGACCCACGGGGAAACAGGCCCCGAGTTACTGGATACAGGCAACCCTATCCTCCATGTTTCCATaGATACAATGTTATGTGTTA +
Preference number: 2 (lower is better)
Translates to: AQRPTGKQAPSYWIQATLSSMFP*IQCYVL
Trigger: TAACACATAACATTGTATGCATGGAAACATGGAGGA...TAGGGTTGCCTGTATCCAGTAACTCGGGGCCTGTTTCCCCGTGGGTCTCTGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000506639.5
3UTR-3UTR CCA 90 bp GGCAACCCTAAAACTGACTGTCCCTCTGGACTCTACGTAGTGAGCCAACACATTCCAAGACAAAAGGCCTaGATGCAACCAATCACTCTG +
Preference number: 2 (lower is better)
Translates to: GNPKTDCPSGLYVVSQHIPRQKA*MQPITL
Trigger: CAGAGTGATTGGTTGCATCCAGGCCTTTTGTCTTGG...AATGTGTTGGCTCACTACGTAGAGTCCAGAGGGACAGTCAGTTTTAGGGTTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000506639.5
3UTR-3UTR CCA 90 bp GTTGAGTCCAGGGAAGCTCCAGGAGCAGGCTGGTTTTATGTAAAGACAATCCCGGCTCCAGGAGCAGGCTaGTTTTATGTAAAGACAATC +
Preference number: 2 (lower is better)
Translates to: VESREAPGAGWFYVKTIPAPGAG*FYVKTI
Trigger: GATTGTCTTTACATAAAACCAGCCTGCTCCTGGAGC...CGGGATTGTCTTTACATAAAACCAGCCTGCTCCTGGAGCTTCCCTGGACTCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000506639.5
3UTR-3UTR CCA 90 bp GGGGGTCCTGAGATCTTTATTTCTGGATGTTGCTGTGTGTTGGGTATAAGATCCCAGGCCCCGAGTTACTaGATACAGGCAACCCTAAAA +
Preference number: 2 (lower is better)
Translates to: GGPEIFISGCCCVLGIRSQAPSY*IQATLK
Trigger: TTTTAGGGTTGCCTGTATCCAGTAACTCGGGGCCTG...GGATCTTATACCCAACACACAGCAACATCCAGAAATAAAGATCTCAGGACCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000506639.5
3UTR CAA 90 bp AAAAGTCAGAACCGGAGTCACACAGGCATCTGTGCCGTCAAAGATTaGACACCACTCTGCCTTCGTCTTCTCTGCAAATACATCTGCAAA +
Preference number: 2 (lower is better)
Translates to: KSQNRSHTGICAVKD*TPLCLRLLCKYICK
Trigger: TTTGCAGATGTATTTGCAGAGAAGACGAAGGCAGAGTGGTGTCAAATCTTTGACGGCACAGATGCCTGTGTGACTCCGGTTCTGACTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382072.6
ENST00000506639.5
3UTR-3UTR TCA 90 bp AAAATCAAGTACTATATGGACACCAACATGGAGCAGAAAATGAGGGCAGCAGTGATGCCTTTAGGAAGTTaGGTCCAGGGAAGCTCCAGG +
Preference number: 2 (lower is better)
Translates to: KIKYYMDTNMEQKMRAAVMPLGS*VQGSSR
Trigger: CCTGGAGCTTCCCTGGACTCAACTTCCTAAAGGCAT...CACTGCTGCCCTCATTTTCTGCTCCATGTTGGTGTCCATATAGTACTTGATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335606.11
ENST00000382072.6
3UTR-3UTR GCA 90 bp TGGCCTCAAGTGATCCTCCATGCCTGGGCTGGAAAACATAACCTTATGGGAAAGCTGCCCCTTCCTAGTTaGATATTCCTGAGCAAATAT +
Preference number: 2 (lower is better)
Translates to: WPQVILHAWAGKHNLMGKLPLPS*IFLSKY
Trigger: ATATTTGCTCAGGAATATGCAACTAGGAAGGGGCAG...CTTTCCCATAAGGTTATGTTTTCCAGCCCAGGCATGGAGGATCACTTGAGGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335606.11
ENST00000382072.6
3UTR-3UTR GCA 90 bp CTCAGTGTGTTCTCCTATGAAAGGATCCCTTTTGAAAGAAGGGATGGCTGGGGTGATTTGACACCACTCTaGCTTCGTCTTCTCTGCAAA +
Preference number: 2 (lower is better)
Translates to: LSVFSYERIPFERRDGWGDLTPL*LRLLCK
Trigger: TTTGCAGAGAAGACGAAGGCAGAGTGGTGTCAAATC...ACCCCAGCCATCCCTTCTTTCAAAAGGGATCCTTTCATAGGAGAACACACTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382072.6
ENST00000506639.5
3UTR-3UTR CCA 90 bp TTACTGGATACAGGCAACCCTAAAACTGACTGTCCCTCTGGACTCTACGTAGTGGCTCCAGGAGCAGGCTaGTTTTATGTAAAGACAATC +
Preference number: 2 (lower is better)
Translates to: LLDTGNPKTDCPSGLYVVAPGAG*FYVKTI
Trigger: GATTGTCTTTACATAAAACCAGCCTGCTCCTGGAGC...CACTACGTAGAGTCCAGAGGGACAGTCAGTTTTAGGGTTGCCTGTATCCAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000506639.5
3UTR CAA 90 bp TACACACTGCATTTTGTGCTGCCTGTCTGCTCAGATCTATTTCCTTaGGTGCTCTTTATCTTATGGGGCTACATTTCCAGGGTTCCCTTG +
Preference number: 2 (lower is better)
Translates to: YTLHFVLPVCSDLFP*VLFILWGYISRVPL
Trigger: CAAGGGAACCCTGGAAATGTAGCCCCATAAGATAAAGAGCACCAAAGGAAATAGATCTGAGCAGACAGGCAGCACAAAATGCAGTGTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335606.11
3UTR-3UTR TCA 90 bp TATTTCGTAGAAACGGAGGTCCAGCCAAGTTCCCCAGGCTGGTCTCGAACTCTTTCACTCTGTTTCACGTaGCTTTTATCACCATACAAT +
Preference number: 2 (lower is better)
Translates to: YFVETEVQPSSPGWSRTLSLCFT*LLSPYN
Trigger: ATTGTATGGTGATAAAAGTCACGTGAAACAGAGTGA...AAGAGTTCGAGACCAGCCTGGGGAACTTGGCTGGACCTCCGTTTCTACGAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335606.11
ENST00000382072.6
3UTR-3UTR TCA 90 bp ATGGACACCAACATGGAGCAGAAAATGAGGGCAGCAGTGTCCAATCTCATTCCAACTAAGAAGCCCTTCTaGGTCTCTGTTTTCTCAACT +
Preference number: 2 (lower is better)
Translates to: MDTNMEQKMRAAVSNLIPTKKPF*VSVFST
Trigger: AGTTGAGAAAACAGAGACTCAGAAGGGCTTCTTAGT...TGGAATGAGATTGGACACTGCTGCCCTCATTTTCTGCTCCATGTTGGTGTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335606.11
ENST00000382072.6
3UTR-3UTR TCA 90 bp ACACCAAGACAAAAGGCCTGGATGCAACCAATCACTCTGTTTCACGTGACTTTTGTATTCAAATTCACTTaGGCCGTGGGCCTGGAAGTT +
Preference number: 2 (lower is better)
Translates to: TPRQKAWMQPITLFHVTFVFKFT*AVGLEV
Trigger: AACTTCCAGGCCCACGGCTCAAGTGAATTTGAATAC...AAAAGTCACGTGAAACAGAGTGATTGGTTGCATCCAGGCCTTTTGTCTTGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382072.6
ENST00000506639.5
3UTR-3UTR TCA 90 bp GCTCCAGGAGCAGGCTGGTTTTATGTAAAGACAATCCCGTCTTCTTTGTCAAAGTCATCCATGCTCATCTaGTTGGGAAGTTCATCAGAC +
Preference number: 2 (lower is better)
Translates to: APGAGWFYVKTIPSSLSKSSMLI*LGSSSD
Trigger: GTCTGATGAACTTCCCAATCAGATGAGCATGGATGA...CTTTGACAAAGAAGACGGGATTGTCTTTACATAAAACCAGCCTGCTCCTGGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506639.5
3UTR-3UTR GCA 90 bp TTCCTTGTTGTGATCATGATGAACAACCTCCTCAAAAGTCAGAACCGGAGTCACTCACACAGGCATCTGTaGCGTCAAAGATTTGACACC +
Preference number: 2 (lower is better)
Translates to: FLVVIMMNNLLKSQNRSHSHRHL*RQRFDT
Trigger: GGTGTCAAATCTTTGACGGCACAGATGCCTGTGTGA...GTGACTCCGGTTCTGACTTTTGAGGAGGTTGTTCATCATGATCACAACAAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382072.6
ENST00000506639.5
3UTR-3UTR CCA 90 bp TGGCCTCAAGTGATCCTCCATGCCTGGGCTGGAAAACATAACCTTATGGGAAAGACTGTTGCTAAAGTTTaGAATGTGCTTAGAGGGAGA +
Preference number: 2 (lower is better)
Translates to: WPQVILHAWAGKHNLMGKTVAKV*NVLRGR
Trigger: TCTCCCTCTAAGCACATTCCAAACTTTAGCAACAGT...CTTTCCCATAAGGTTATGTTTTCCAGCCCAGGCATGGAGGATCACTTGAGGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335606.11
ENST00000382072.6
3UTR CAA 90 bp CTGTGTTTGTCTTTGATTTCCTCAAGAGCGGAGAACAGGTCTGTTTaGTTCATTATGGTATCCCCAGCAAGTATCATGATACCTGGCACC +
Preference number: 2 (lower is better)
Translates to: LCLSLISSRAENRSV*FIMVSPASIMIPGT
Trigger: GGTGCCAGGTATCATGATACTTGCTGGGGATACCATAATGAACAAAACAGACCTGTTCTCCGCTCTTGAGGAAATCAAAGACAAACACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335606.11
3UTR-3UTR GCA 90 bp TATTTCGTAGAAACGGAGGTCCAGCCAAGTTCCCCAGGCTGGTCTCGAACTCTTTCCTCCATGTTTCCATaGATACAATGTTATGTGTTA +
Preference number: 2 (lower is better)
Translates to: YFVETEVQPSSPGWSRTLSSMFP*IQCYVL
Trigger: TAACACATAACATTGTATGCATGGAAACATGGAGGA...AAGAGTTCGAGACCAGCCTGGGGAACTTGGCTGGACCTCCGTTTCTACGAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335606.11
ENST00000382072.6
3UTR-3UTR GCA 90 bp GTTGAGTCCAGGGAAGCTCCAGGAGCAGGCTGGTTTTATGTAAAGACAATCCCGTCCTCCATGTTTCCATaGATACAATGTTATGTGTTA +
Preference number: 2 (lower is better)
Translates to: VESREAPGAGWFYVKTIPSSMFP*IQCYVL
Trigger: TAACACATAACATTGTATGCATGGAAACATGGAGGA...CGGGATTGTCTTTACATAAAACCAGCCTGCTCCTGGAGCTTCCCTGGACTCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000506639.5
3UTR-3UTR GCA 90 bp TTCCTTGTTGTGATCATGATGAACAACCTCCTCAAAAGTCAGAACCGGAGTCACGATTTGACACCACTCTaGCTTCGTCTTCTCTGCAAA +
Preference number: 2 (lower is better)
Translates to: FLVVIMMNNLLKSQNRSHDLTPL*LRLLCK
Trigger: TTTGCAGAGAAGACGAAGGCAGAGTGGTGTCAAATC...GTGACTCCGGTTCTGACTTTTGAGGAGGTTGTTCATCATGATCACAACAAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382072.6
ENST00000506639.5
3UTR-3UTR CCA 90 bp GGTATAAGAAAGGCTTGTAACTTAACTCAGTCCAAGGAGACACAAAACGACTTGCCAAGACAAAAGGCCTaGATGCAACCAATCACTCTG +
Preference number: 2 (lower is better)
Translates to: GIRKACNLTQSKETQNDLPRQKA*MQPITL
Trigger: CAGAGTGATTGGTTGCATCCAGGCCTTTTGTCTTGG...CAAGTCGTTTTGTGTCTCCTTGGACTGAGTTAAGTTACAAGCCTTTCTTATACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000506639.5
3UTR-3UTR TCA 90 bp TTAGAGGGAGATCATGAACACCAAGACAAAAGGCCTGGATGCAACCAATCACTCTCACTCTGTTTCACGTaGCTTTTATCACCATACAAT +
Preference number: 2 (lower is better)
Translates to: LEGDHEHQDKRPGCNQSLSLCFT*LLSPYN
Trigger: ATTGTATGGTGATAAAAGTCACGTGAAACAGAGTGA...GAGTGATTGGTTGCATCCAGGCCTTTTGTCTTGGTGTTCATGATCTCCCTCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000506639.5
3UTR-3UTR TCA 90 bp GGGGGTCCTGAGATCTTTATTTCTGGATGTTGCTGTGTGTTGGGTATAAGATCCTCACTCTGTTTCACGTaGCTTTTATCACCATACAAT +
Preference number: 2 (lower is better)
Translates to: GGPEIFISGCCCVLGIRSSLCFT*LLSPYN
Trigger: ATTGTATGGTGATAAAAGTCACGTGAAACAGAGTGA...GGATCTTATACCCAACACACAGCAACATCCAGAAATAAAGATCTCAGGACCCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000506639.5
3UTR-3UTR TCA 90 bp ACACCAAGACAAAAGGCCTGGATGCAACCAATCACTCTGTTTCACGTGACTTTTAAATCTCTTCGCGGCTaGATCCAAATTCTTCAAGTA +
Preference number: 2 (lower is better)
Translates to: TPRQKAWMQPITLFHVTFKSLRG*IQILQV
Trigger: TACTTGAAGAATTTGGATTCAGCCGCGAAGAGATTT...AAAAGTCACGTGAAACAGAGTGATTGGTTGCATCCAGGCCTTTTGTCTTGGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382072.6
ENST00000506639.5
3UTR-3UTR GCA 90 bp GGGGGTCCTGAGATCTTTATTTCTGGATGTTGCTGTGTGTTGGGTATAAGATCCCTAAAGTTTGGAATGTaGTTAGAGGGAGATCATGAA +
Preference number: 2 (lower is better)
Translates to: GGPEIFISGCCCVLGIRSLKFGM*LEGDHE
Trigger: TTCATGATCTCCCTCTAAGCACATTCCAAACTTTAG...GGATCTTATACCCAACACACAGCAACATCCAGAAATAAAGATCTCAGGACCCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000506639.5
3UTR-3UTR CCA 90 bp TGGATGCAACCAATCACTCTGTTTCACGTGACTTTTATCACCATACAATTTGTGCCAAGACAAAAGGCCTaGATGCAACCAATCACTCTG +
Preference number: 2 (lower is better)
Translates to: WMQPITLFHVTFITIQFVPRQKA*MQPITL
Trigger: CAGAGTGATTGGTTGCATCCAGGCCTTTTGTCTTGG...CACAAATTGTATGGTGATAAAAGTCACGTGAAACAGAGTGATTGGTTGCATCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000506639.5
3UTR-3UTR GCA 90 bp TGGATGCAACCAATCACTCTGTTTCACGTGACTTTTATCACCATACAATTTGTGGACAAAAGGCCTGGATaGAACCAATCACTCTGTTTC +
Preference number: 2 (lower is better)
Translates to: WMQPITLFHVTFITIQFVDKRPG*NQSLCF
Trigger: GAAACAGAGTGATTGGTTGCATCCAGGCCTTTTGTC...CACAAATTGTATGGTGATAAAAGTCACGTGAAACAGAGTGATTGGTTGCATCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000506639.5
3UTR-3UTR CCA 90 bp CTGGTTTTATGTAAAGACAATCCCGTCTTCTTTGTCAAAGACAGGTATAAGAAACTTGAGCCGTGGGCCTaGAAGTTAGAGACTAGCTTT +
Preference number: 2 (lower is better)
Translates to: LVLCKDNPVFFVKDRYKKLEPWA*KLETSF
Trigger: AAAGCTAGTCTCTAACTTCCAGGCCCACGGCTCAAG...TTTCTTATACCTGTCTTTGACAAAGAAGACGGGATTGTCTTTACATAAAACCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382072.6
ENST00000506639.5
3UTR-3UTR CCA 90 bp AAAATCAAGTACTATATGGACACCAACATGGAGCAGAAAATGAGGGCAGCAGTGAAATCAAGTACTATATaGACACCAACATGGAGCAGA +
Preference number: 2 (lower is better)
Translates to: KIKYYMDTNMEQKMRAAVKSSTI*TPTWSR
Trigger: TCTGCTCCATGTTGGTGTCCATATAGTACTTGATTT...CACTGCTGCCCTCATTTTCTGCTCCATGTTGGTGTCCATATAGTACTTGATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335606.11
ENST00000382072.6
3UTR-3UTR CCA 90 bp AAGTATCTCCTCAGTGTGTTCTCCTATGAAAGGATCCCTTTTGAAAGAAGGGATCCATGCTCATCTGATTaGGAAGTTCATCAGACTTTA +
Preference number: 2 (lower is better)
Translates to: KYLLSVFSYERIPFERRDPCSSD*EVHQTL
Trigger: TAAAGTCTGATGAACTTCCCAATCAGATGAGCATGG...ATCCCTTCTTTCAAAAGGGATCCTTTCATAGGAGAACACACTGAGGAGATACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506639.5
3UTR CAA 90 bp ACATTTTACAATGAGATAATTCTGGGTTTATTCCATATCCTGTGTTaGTCTTTGATTTCCTCAAGAGCGGAGAACAGGTCTGTTTTGTTC +
Preference number: 2 (lower is better)
Translates to: TFYNEIILGLFHILC*SLISSRAENRSVLF
Trigger: GAACAAAACAGACCTGTTCTCCGCTCTTGAGGAAATCAAAGACAAACACAGGATATGGAATAAACCCAGAATTATCTCATTGTAAAATGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335606.11
3UTR-3UTR GCA 90 bp CTGGTTTTATGTAAAGACAATCCCGTCTTCTTTGTCAAAGACAGGTATAAGAAATGCCTTCGTCTTCTCTaGAAATACATCTGCAAACTT +
Preference number: 2 (lower is better)
Translates to: LVLCKDNPVFFVKDRYKKCLRLL*KYICKL
Trigger: AAGTTTGCAGATGTATTTGCAGAGAAGACGAAGGCA...TTTCTTATACCTGTCTTTGACAAAGAAGACGGGATTGTCTTTACATAAAACCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382072.6
ENST00000506639.5
3UTR GCA 72 bp TTTAACAGCAGAGGTGCAGGGCGGGGGCTCACGTCCTaGTCCTCACTGGTGATAAACGAGCCCCGTTCCTTG +
Preference number: 3 (lower is better)
Translates to: FNSRGAGRGLTS*SSLVINEPRSL
Trigger: CAAGGAACGGGGCTCGTTTATCACCAGTGAGGAGCAGGACGTGAGCCCCCGCCCTGCACCTCTGCTGTTAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382072.6
ENST00000506639.5
3UTR-3UTR CAA 90 bp GCCCAGAGACCCACGGGGAAACAGGCCCCGAGTTACTGGATACAGGCAACCCTAATGAAAGGATCCCTTTaGAAAGAAGGGATGGCTGGG +
Preference number: 3 (lower is better)
Translates to: AQRPTGKQAPSYWIQATLMKGSL*KEGMAG
Trigger: CCCAGCCATCCCTTCTTTCAAAAGGGATCCTTTCAT...TAGGGTTGCCTGTATCCAGTAACTCGGGGCCTGTTTCCCCGTGGGTCTCTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382072.6
ENST00000506639.5
3UTR CCA 72 bp CTATGTCTCCAAGGTGGGTGCAGCAACTTTGGCTTCTaGGTCCAAGTACACCAGCTTTCCCATCACCCCTGC +
Preference number: 3 (lower is better)
Translates to: LCLQGGCSNFGF*VQVHQLSHHPC
Trigger: GCAGGGGTGATGGGAAAGCTGGTGTACTTGGACCCAGAAGCCAAAGTTGCTGCACCCACCTTGGAGACATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335606.11
3UTR-3UTR CAA 90 bp AAAGGAAAGCTGACAGCCCAGAGACCCACGGGGAAACAGGCCCCGAGTTACTGGACAATCCCGTCTTCTTaGTCAAAGACAGGTATAAGA +
Preference number: 3 (lower is better)
Translates to: KGKLTAQRPTGKQAPSYWTIPSS*SKTGIR
Trigger: TCTTATACCTGTCTTTGACAAAGAAGACGGGATTGT...CCAGTAACTCGGGGCCTGTTTCCCCGTGGGTCTCTGGGCTGTCAGCTTTCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000506639.5
3UTR-3UTR CAA 90 bp CCCGAGTTACTGGATACAGGCAACCCTAAAACTGACTGTCCCTCTGGACTCTACTGTGCCGTCAAAGATTaGACACCACTCTGCCTTCGT +
Preference number: 3 (lower is better)
Translates to: PELLDTGNPKTDCPSGLYCAVKD*TPLCLR
Trigger: ACGAAGGCAGAGTGGTGTCAAATCTTTGACGGCACA...GTAGAGTCCAGAGGGACAGTCAGTTTTAGGGTTGCCTGTATCCAGTAACTCGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382072.6
ENST00000506639.5
3UTR GCA 72 bp TTCTGGGTCCAAGTACACCAGCTTTCCCATCACCCCTaGAACCATAGGAGTGGTCTTGGCTTCCTAGTTATG +
Preference number: 3 (lower is better)
Translates to: FWVQVHQLSHHP*NHRSGLGFLVM
Trigger: CATAACTAGGAAGCCAAGACCACTCCTATGGTTGCAGGGGTGATGGGAAAGCTGGTGTACTTGGACCCAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335606.11
3UTR GCA 72 bp CCTCAAAAGTCAGAACCGGAGTCACACAGGCATCTGTaGCGTCAAAGATTTGACACCACTCTGCCTTCGTCT +
Preference number: 3 (lower is better)
Translates to: PQKSEPESHRHL*RQRFDTTLPSS
Trigger: AGACGAAGGCAGAGTGGTGTCAAATCTTTGACGGCACAGATGCCTGTGTGACTCCGGTTCTGACTTTTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382072.6
ENST00000506639.5
3UTR CCA 72 bp CCTGAGGTATTACTGCCAGTGTCTATGTCTCCAAGGTaGGTGCAGCAACTTTGGCTTCTGGGTCCAAGTACA +
Preference number: 3 (lower is better)
Translates to: PEVLLPVSMSPR*VQQLWLLGPST
Trigger: TGTACTTGGACCCAGAAGCCAAAGTTGCTGCACCCACCTTGGAGACATAGACACTGGCAGTAATACCTCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335606.11
3UTR TCA 72 bp ACCGGAGTCACACAGGCATCTGTGCCGTCAAAGATTTaGCACCACTCTGCCTTCGTCTTCTCTGCAAATACA +
Preference number: 3 (lower is better)
Translates to: TGVTQASVPSKI*HHSAFVFSANT
Trigger: TGTATTTGCAGAGAAGACGAAGGCAGAGTGGTGTCAAATCTTTGACGGCACAGATGCCTGTGTGACTCCGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382072.6
ENST00000506639.5
3UTR TCA 72 bp ATGAAGAAACCTGCTCCACCTTCCTCTTGCGATTGTTaGACGGCAGTTGAGATACTGCGCAGAATGGACCTT +
Preference number: 3 (lower is better)
Translates to: MKKPAPPSSCDC*TAVEILRRMDL
Trigger: AAGGTCCATTCTGCGCAGTATCTCAACTGCCGTTCAACAATCGCAAGAGGAAGGTGGAGCAGGTTTCTTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335606.11
ENST00000382072.6
3UTR GCA 72 bp GGGCAGCAGTGTCCAATCTCATTCCAGGTGAGAAGTTaGACAGTGTCCAATAGGTGCATACATCTCCTTAGT +
Preference number: 3 (lower is better)
Translates to: GQQCPISFQVRS*TVSNRCIHLLS
Trigger: ACTAAGGAGATGTATGCACCTATTGGACACTGTGCAACTTCTCACCTGGAATGAGATTGGACACTGCTGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335606.11
ENST00000382072.6
3UTR CCA 72 bp GCGATTGTTGAACGGCAGTTGAGATACTGCGCAGAATaGACCTTATTGATGGCCTACCCAACATCCATTCTC +
Preference number: 3 (lower is better)
Translates to: AIVERQLRYCAE*TLLMAYPTSIL
Trigger: GAGAATGGATGTTGGGTAGGCCATCAATAAGGTCCATTCTGCGCAGTATCTCAACTGCCGTTCAACAATCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335606.11
ENST00000382072.6
3UTR-3UTR CAA 90 bp CAGCTTTCCCATCACCCCTGCAACCATAGGAGTGGTCTTGGCTTCCTAGTTATGTGGGTTATATTTTCCTaGCTGGACCGAGTTCAAATG +
Preference number: 3 (lower is better)
Translates to: QLSHHPCNHRSGLGFLVMWVIFS*LDRVQM
Trigger: CATTTGAACTCGGTCCAGCAAGGAAAATATAACCCA...CATAACTAGGAAGCCAAGACCACTCCTATGGTTGCAGGGGTGATGGGAAAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335606.11
3UTR-3UTR CAA 90 bp TTCCTTGTTGTGATCATGATGAACAACCTCCTCAAAAGTCAGAACCGGAGTCACTGTGCCGTCAAAGATTaGACACCACTCTGCCTTCGT +
Preference number: 3 (lower is better)
Translates to: FLVVIMMNNLLKSQNRSHCAVKD*TPLCLR
Trigger: ACGAAGGCAGAGTGGTGTCAAATCTTTGACGGCACA...GTGACTCCGGTTCTGACTTTTGAGGAGGTTGTTCATCATGATCACAACAAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382072.6
ENST00000506639.5
3UTR TCA 72 bp TCAAGTACTATATGGACACCAACATGGAGCAGAAAATaGGGGCAGCAGTGTCCAATCTCATTCCAGGTGAGA +
Preference number: 3 (lower is better)
Translates to: SSTIWTPTWSRK*GQQCPISFQVR
Trigger: TCTCACCTGGAATGAGATTGGACACTGCTGCCCTCATTTTCTGCTCCATGTTGGTGTCCATATAGTACTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335606.11
ENST00000382072.6
3UTR GCA 72 bp TTGTGCTGCCTGTCTGCTCAGATCTATTTCCTTTGGTaGTCTTTATCTTATGGGGCTACATTTCCAGGGTTC +
Preference number: 3 (lower is better)
Translates to: LCCLSAQIYFLW*SLSYGATFPGF
Trigger: GAACCCTGGAAATGTAGCCCCATAAGATAAAGAGCACCAAAGGAAATAGATCTGAGCAGACAGGCAGCACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335606.11
3UTR TCA 72 bp AAGCCAGGATATTTCCCTAGATTTCTTTCTTCTCCCTaGGGTATTACTGCCAGTGTCTATGTCTCCAAGGTG +
Preference number: 3 (lower is better)
Translates to: KPGYFPRFLSSP*GITASVYVSKV
Trigger: CACCTTGGAGACATAGACACTGGCAGTAATACCTCAGGGAGAAGAAAGAAATCTAGGGAAATATCCTGGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335606.11
3UTR CCA 72 bp ATTTTGTGCTGCCTGTCTGCTCAGATCTATTTCCTTTaGTGCTCTTTATCTTATGGGGCTACATTTCCAGGG +
Preference number: 3 (lower is better)
Translates to: ILCCLSAQIYFL*CSLSYGATFPG
Trigger: CCCTGGAAATGTAGCCCCATAAGATAAAGAGCACCAAAGGAAATAGATCTGAGCAGACAGGCAGCACAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335606.11
3UTR-3UTR CAA 90 bp TTACTGGATACAGGCAACCCTAAAACTGACTGTCCCTCTGGACTCTACGTAGTGTCTGTAATTCTTTTCTaGATTAGAGTGGTAGGACAC +
Preference number: 3 (lower is better)
Translates to: LLDTGNPKTDCPSGLYVVSVILF*IRVVGH
Trigger: GTGTCCTACCACTCTAATCAAGAAAAGAATTACAGA...CACTACGTAGAGTCCAGAGGGACAGTCAGTTTTAGGGTTGCCTGTATCCAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000506639.5
3UTR GCA 72 bp CCTATCAGGGTTGCCTCACTATCTTCTGGGCTTCTCTaGTCTTTCGTCACCAGTGGAATTCTTTATATTAAA +
Preference number: 3 (lower is better)
Translates to: PIRVASLSSGLL*SFVTSGILYIK
Trigger: TTTAATATAAAGAATTCCACTGGTGACGAAAGAGCAGAGAAGCCCAGAAGATAGTGAGGCAACCCTGATAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335606.11
3UTR-3UTR CAA 90 bp TTAGAGGGAGATCATGAACACCAAGACAAAAGGCCTGGATGCAACCAATCACTCTCTGTAATTCTTTTCTaGATTAGAGTGGTAGGACAC +
Preference number: 3 (lower is better)
Translates to: LEGDHEHQDKRPGCNQSLSVILF*IRVVGH
Trigger: GTGTCCTACCACTCTAATCAAGAAAAGAATTACAGA...GAGTGATTGGTTGCATCCAGGCCTTTTGTCTTGGTGTTCATGATCTCCCTCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000506639.5
3UTR TCA 72 bp AAAAGGCCTGGATGCAACCAATCACTCTGTTTCACGTaGCTTTTATCACCATACAATTTGTGGCATTTCCTC +
Preference number: 3 (lower is better)
Translates to: KRPGCNQSLCFT*LLSPYNLWHFL
Trigger: GAGGAAATGCCACAAATTGTATGGTGATAAAAGTCACGTGAAACAGAGTGATTGGTTGCATCCAGGCCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000506639.5
3UTR TCA 72 bp TTCTTCTTCATTTCTGGCCAATCATCCATGCTCATCTaGTTGGGAAGTTCATCAGACTTTAGTCCAAGTCCT +
Preference number: 3 (lower is better)
Translates to: FFFISGQSSMLI*LGSSSDFSPSP
Trigger: AGGACTTGGACTAAAGTCTGATGAACTTCCCAATCAGATGAGCATGGATGATTGGCCAGAAATGAAGAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506639.5
3UTR-3UTR CAA 90 bp GGCTTCTCTGCTCTTTCGTCACCAGTGGAATTCTTTATATTAAATTTCCTCTGTGGATGTTGCTGTGTGTaGGGTATAAGATCCAGAACT +
Preference number: 3 (lower is better)
Translates to: GFSALSSPVEFFILNFLCGCCCV*GIRSRT
Trigger: AGTTCTGGATCTTATACCCAACACACAGCAACATCC...ACAGAGGAAATTTAATATAAAGAATTCCACTGGTGACGAAAGAGCAGAGAAGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335606.11
3UTR-3UTR CAA 90 bp GGTATAAGAAAGGCTTGTAACTTAACTCAGTCCAAGGAGACACAAAACGACTTGCTTTATTTCTGGATGTaGCTGTGTGTTGGGTATAAG +
Preference number: 3 (lower is better)
Translates to: GIRKACNLTQSKETQNDLLYFWM*LCVGYK
Trigger: CTTATACCCAACACACAGCAACATCCAGAAATAAAG...CAAGTCGTTTTGTGTCTCCTTGGACTGAGTTAAGTTACAAGCCTTTCTTATACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000506639.5
3UTR TCA 72 bp ACCCTTCTTCAAATCATTAGCTGTGTCAGATCGCCCTaGTATTTCTCCTCGTGGTACTTAACACATTTTACA +
Preference number: 3 (lower is better)
Translates to: TLLQIISCVRSP*YFSSWYLTHFT
Trigger: TGTAAAATGTGTTAAGTACCACGAGGAGAAATATCAGGGCGATCTGACACAGCTAATGATTTGAAGAAGGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335606.11
3UTR TCA 72 bp CTGTCACCAGCATTAGCGACTAATTCATTAGCTTCTTaGTCCTTTCTTTATTGGTCCGGATTCCCACTATTT +
Preference number: 3 (lower is better)
Translates to: LSPALATNSLAS*SFLYWSGFPLF
Trigger: AAATAGTGGGAATCCGGACCAATAAAGAAAGGATCAAGAAGCTAATGAATTAGTCGCTAATGCTGGTGACAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426255.6
3UTR-3UTR CAA 90 bp CTGGTTTTATGTAAAGACAATCCCGTCTTCTTTGTCAAAGACAGGTATAAGAAAGGATGTTGCTGTGTGTaGGGTATAAGATCCAGAACT +
Preference number: 3 (lower is better)
Translates to: LVLCKDNPVFFVKDRYKKGCCCV*GIRSRT
Trigger: AGTTCTGGATCTTATACCCAACACACAGCAACATCC...TTTCTTATACCTGTCTTTGACAAAGAAGACGGGATTGTCTTTACATAAAACCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000506639.5
3UTR-3UTR CAA 90 bp ATTCTTTTCTTGATTAGAGTGGTAGGACACTGTAATACTGTTCCTCCATGTTTCTCTGTAATTCTTTTCTaGATTAGAGTGGTAGGACAC +
Preference number: 3 (lower is better)
Translates to: ILFLIRVVGHCNTVPPCFSVILF*IRVVGH
Trigger: GTGTCCTACCACTCTAATCAAGAAAAGAATTACAGA...GAAACATGGAGGAACAGTATTACAGTGTCCTACCACTCTAATCAAGAAAAGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000502637.5
ENST00000506639.5
3UTR TCA 72 bp AAACACAATGAAACTCAACATCTGTCAGACATCACGTaGACTACTAGTGAGGTAGTTCATTCTTTCAACATA +
Preference number: 3 (lower is better)
Translates to: KHNETQHLSDIT*TTSEVVHSFNI
Trigger: TATGTTGAAAGAATGAACTACCTCACTAGTAGTTCACGTGATGTCTGACAGATGTTGAGTTTCATTGTGTTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335606.11
ENST00000382072.6
CDS-3UTR GCA 90 bp GCCCAGAGACCCACGGGGAAACAGGCCCCGAGTTACTGGATACAGGCAACCCTAACGACCGAGATGCCCTaGAGTGCCATGGCGCTTCCC +
Preference number: 4 (lower is better)
Translates to: AQRPTGKQAPSYWIQATLTTEMP*SAMALP
Trigger: GGGAAGCGCCATGGCACTGCAGGGCATCTCGGTCGT...TAGGGTTGCCTGTATCCAGTAACTCGGGGCCTGTTTCCCCGTGGGTCTCTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000506639.5
CDS-3UTR CCA 90 bp GGGATGGCTGGGGTGTTTAACAGCAGAGGTGCAGGGCGGGGGCTCACGTCCTGCATCTCTGGGCCCAGCTaGAGTTTCTCCATGACACCG +
Preference number: 4 (lower is better)
Translates to: GMAGVFNSRGAGRGLTSCISGPS*SFSMTP
Trigger: CGGTGTCATGGAGAAACTCCAGCTGGGCCCAGAGAT...GCAGGACGTGAGCCCCCGCCCTGCACCTCTGCTGTTAAACACCCCAGCCATCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382072.6
ENST00000506639.5
CDS-3UTR CCA 90 bp GGGATGGCTGGGGTGTTTAACAGCAGAGGTGCAGGGCGGGGGCTCACGTCCTGCCAGAAGCTTCCTGACTaGCCAAATCCACTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: GMAGVFNSRGAGRGLTSCQKLPD*PNPLSL
Trigger: CAGGCTGAGTGGATTTGGCCAGTCAGGAAGCTTCTG...GCAGGACGTGAGCCCCCGCCCTGCACCTCTGCTGTTAAACACCCCAGCCATCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382072.6
ENST00000506639.5
CDS-3UTR TCA 90 bp TGCAGGGCGGGGGCTCACGTCCTGCTCCTCACTGGTGATAAACGAGCCCCGTTCATGCCTTTAGGAAGTTaGGTCCAGGGAAGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: CRAGAHVLLLTGDKRAPFMPLGS*VQGSSR
Trigger: CCTGGAGCTTCCCTGGACTCAACTTCCTAAAGGCAT...GAACGGGGCTCGTTTATCACCAGTGAGGAGCAGGACGTGAGCCCCCGCCCTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382072.6
ENST00000506639.5
CDS-3UTR TCA 90 bp GGGATGGCTGGGGTGTTTAACAGCAGAGGTGCAGGGCGGGGGCTCACGTCCTGCCAATCTCATTCCAGGTaGGAAGTTGCACAGTGTCCA +
Preference number: 4 (lower is better)
Translates to: GMAGVFNSRGAGRGLTSCQSHSR*EVAQCP
Trigger: TGGACACTGTGCAACTTCTCACCTGGAATGAGATTG...GCAGGACGTGAGCCCCCGCCCTGCACCTCTGCTGTTAAACACCCCAGCCATCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382072.6
CDS-3UTR GCA 90 bp GAGAAAGGAAAGCTGACAGCCCAGAGACCCACGGGGAAACAGGCCCCGAGTTACCGGGGGCTCACGTCCTaGTCCTCACTGGTGATAAAC +
Preference number: 4 (lower is better)
Translates to: EKGKLTAQRPTGKQAPSYRGLTS*SSLVIN
Trigger: GTTTATCACCAGTGAGGAGCAGGACGTGAGCCCCCG...GTAACTCGGGGCCTGTTTCCCCGTGGGTCTCTGGGCTGTCAGCTTTCCTTTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000506639.5
CDS-3UTR CCA 90 bp GGATGGCTGGGGTGTTTAACAGCAGAGGTGCAGGGCGGGGGCTCACGTCCTGCTCTTGAGCCGTGGGCCTaGAAGTTAGAGACTAGCTTT +
Preference number: 4 (lower is better)
Translates to: GWLGCLTAEVQGGGSRPALEPWA*KLETSF
Trigger: AAAGCTAGTCTCTAACTTCCAGGCCCACGGCTCAAG...AGCAGGACGTGAGCCCCCGCCCTGCACCTCTGCTGTTAAACACCCCAGCCATCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382072.6
ENST00000506639.5
CDS-3UTR GCA 90 bp GGCAACCCTAAAACTGACTGTCCCTCTGGACTCTACGTAGTGAGCCAACACATTGCGGCTCCCCGCGGCTaGTTCAGGTCCAGCACTAGC +
Preference number: 4 (lower is better)
Translates to: GNPKTDCPSGLYVVSQHIAAPRG*FRSSTS
Trigger: GCTAGTGCTGGACCTGAAGCAGCCGCGGGGAGCCGC...AATGTGTTGGCTCACTACGTAGAGTCCAGAGGGACAGTCAGTTTTAGGGTTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000506639.5
CDS-3UTR GCA 90 bp TGGCCTCAAGTGATCCTCCATGCCTGGGCTGGAAAACATAACCTTATGGGAAAGGCGGCTCCCCGCGGCTaGTTCAGGTCCAGCACTAGC +
Preference number: 4 (lower is better)
Translates to: WPQVILHAWAGKHNLMGKAAPRG*FRSSTS
Trigger: GCTAGTGCTGGACCTGAAGCAGCCGCGGGGAGCCGC...CTTTCCCATAAGGTTATGTTTTCCAGCCCAGGCATGGAGGATCACTTGAGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335606.11
ENST00000382072.6
CDS-3UTR GCA 90 bp AAAGGAAAGCTGACAGCCCAGAGACCCACGGGGAAACAGGCCCCGAGTTACTGGCTTGGATTTTCCCGCTaGAGAATCTCTGGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: KGKLTAQRPTGKQAPSYWLGFSR*RISGPS
Trigger: GCTGGGCCCAGAGATTCTGCAGCGGGAAAATCCAAG...CCAGTAACTCGGGGCCTGTTTCCCCGTGGGTCTCTGGGCTGTCAGCTTTCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000506639.5
CDS-3UTR CCA 90 bp GCCCAGAGACCCACGGGGAAACAGGCCCCGAGTTACTGGATACAGGCAACCCTACAGAAGCTTCCTGACTaGCCAAATCCACTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: AQRPTGKQAPSYWIQATLQKLPD*PNPLSL
Trigger: CAGGCTGAGTGGATTTGGCCAGTCAGGAAGCTTCTG...TAGGGTTGCCTGTATCCAGTAACTCGGGGCCTGTTTCCCCGTGGGTCTCTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000506639.5
CDS-3UTR GCA 90 bp TGGCCTCAAGTGATCCTCCATGCCTGGGCTGGAAAACATAACCTTATGGGAAAGGCTCCACGACCGAGATaGCCTGCAGTGCCATGGCGC +
Preference number: 4 (lower is better)
Translates to: WPQVILHAWAGKHNLMGKAPRPR*PAVPWR
Trigger: GCGCCATGGCACTGCAGGGCATCTCGGTCGTGGAGC...CTTTCCCATAAGGTTATGTTTTCCAGCCCAGGCATGGAGGATCACTTGAGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335606.11
ENST00000382072.6
CDS-3UTR GCA 90 bp GTGTTTAACAGCAGAGGTGCAGGGCGGGGGCTCACGTCCTGCTCCTCACTGGTGGTTCTGTCCTCGAGGTaGTTCCCACAGACTCAATTT +
Preference number: 4 (lower is better)
Translates to: VFNSRGAGRGLTSCSSLVVLSSR*FPQTQF
Trigger: AAATTGAGTCTGTGGGAAGCACCTCGAGGACAGAAC...CACCAGTGAGGAGCAGGACGTGAGCCCCCGCCCTGCACCTCTGCTGTTAAACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382072.6
ENST00000506639.5
CDS-3UTR GCA 90 bp GGATGGCTGGGGTGTTTAACAGCAGAGGTGCAGGGCGGGGGCTCACGTCCTGCTGATTTGACACCACTCTaGCTTCGTCTTCTCTGCAAA +
Preference number: 4 (lower is better)
Translates to: GWLGCLTAEVQGGGSRPADLTPL*LRLLCK
Trigger: TTTGCAGAGAAGACGAAGGCAGAGTGGTGTCAAATC...AGCAGGACGTGAGCCCCCGCCCTGCACCTCTGCTGTTAAACACCCCAGCCATCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382072.6
ENST00000506639.5
CDS-3UTR TCA 90 bp GGGATGGCTGGGGTGTTTAACAGCAGAGGTGCAGGGCGGGGGCTCACGTCCTGCAATTTCATATTTTTGTaGGACTGGGTTTTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: GMAGVFNSRGAGRGLTSCNFIFL*DWVFQA
Trigger: GGCCTGGAAAACCCAGTCTCACAAAAATATGAAATT...GCAGGACGTGAGCCCCCGCCCTGCACCTCTGCTGTTAAACACCCCAGCCATCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000382072.6
CDS-3UTR GCA 90 bp TGGCCTCAAGTGATCCTCCATGCCTGGGCTGGAAAACATAACCTTATGGGAAAGACGACCGAGATGCCCTaGAGTGCCATGGCGCTTCCC +
Preference number: 4 (lower is better)
Translates to: WPQVILHAWAGKHNLMGKTTEMP*SAMALP
Trigger: GGGAAGCGCCATGGCACTGCAGGGCATCTCGGTCGT...CTTTCCCATAAGGTTATGTTTTCCAGCCCAGGCATGGAGGATCACTTGAGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335606.11
ENST00000382072.6
CDS-3UTR GCA 90 bp ATGGACACCAACATGGAGCAGAAAATGAGGGCAGCAGTGTCCAATCTCATTCCAGCACATCCGACCGCTTaGACAGACGCCGCAGCACGG +
Preference number: 4 (lower is better)
Translates to: MDTNMEQKMRAAVSNLIPAHPTA*TDAAAR
Trigger: CCGTGCTGCGGCGTCTGTGCAAGCGGTCGGATGTGC...TGGAATGAGATTGGACACTGCTGCCCTCATTTTCTGCTCCATGTTGGTGTCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335606.11
ENST00000382072.6
CDS-3UTR GCA 90 bp TTATTGATGGCCTACCCAACATCCATTCTCTACTCCCTCTACTCTGATGGCACCGCACATCCGACCGCTTaGACAGACGCCGCAGCACGG +
Preference number: 4 (lower is better)
Translates to: LLMAYPTSILYSLYSDGTAHPTA*TDAAAR
Trigger: CCGTGCTGCGGCGTCTGTGCAAGCGGTCGGATGTGC...GGTGCCATCAGAGTAGAGGGAGTAGAGAATGGATGTTGGGTAGGCCATCAATAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335606.11
ENST00000382072.6
CDS-3UTR GCA 90 bp GGATGGCTGGGGTGTTTAACAGCAGAGGTGCAGGGCGGGGGCTCACGTCCTGCTCATGAATTCCCCATCTaGTGTCCTGTAAGTCGTATA +
Preference number: 4 (lower is better)
Translates to: GWLGCLTAEVQGGGSRPAHEFPI*CPVSRI
Trigger: TATACGACTTACAGGACAGCAGATGGGGAATTCATG...AGCAGGACGTGAGCCCCCGCCCTGCACCTCTGCTGTTAAACACCCCAGCCATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000382072.6
ENST00000506639.5
CDS-3UTR GCA 90 bp TCCAAGTACACCAGCTTTCCCATCACCCCTGCAACCATAGGAGTGGTCTTGGCTCGGGGGCTCACGTCCTaGTCCTCACTGGTGATAAAC +
Preference number: 4 (lower is better)
Translates to: SKYTSFPITPATIGVVLARGLTS*SSLVIN
Trigger: GTTTATCACCAGTGAGGAGCAGGACGTGAGCCCCCG...AGCCAAGACCACTCCTATGGTTGCAGGGGTGATGGGAAAGCTGGTGTACTTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335606.11
CDS-3UTR CCA 90 bp AAAGGAAAGCTGACAGCCCAGAGACCCACGGGGAAACAGGCCCCGAGTTACTGGCAGGCCCCGAGTTACTaGATACAGGCAACCCTAAAA +
Preference number: 4 (lower is better)
Translates to: KGKLTAQRPTGKQAPSYWQAPSY*IQATLK
Trigger: TTTTAGGGTTGCCTGTATCCAGTAACTCGGGGCCTG...CCAGTAACTCGGGGCCTGTTTCCCCGTGGGTCTCTGGGCTGTCAGCTTTCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000506639.5
CDS-3UTR TCA 90 bp AAAGGAAAGCTGACAGCCCAGAGACCCACGGGGAAACAGGCCCCGAGTTACTGGCTTAGAGGGAGATCATaGACACCAAGACAAAAGGCC +
Preference number: 4 (lower is better)
Translates to: KGKLTAQRPTGKQAPSYWLRGRS*TPRQKA
Trigger: GGCCTTTTGTCTTGGTGTTCATGATCTCCCTCTAAG...CCAGTAACTCGGGGCCTGTTTCCCCGTGGGTCTCTGGGCTGTCAGCTTTCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000506639.5
CDS-3UTR GCA 90 bp CCCGTTCCTTGTTGTGATCATGATGAACAACCTCCTCAAAAGTCAGAACCGGAGACGACCGAGATGCCCTaGAGTGCCATGGCGCTTCCC +
Preference number: 4 (lower is better)
Translates to: PVPCCDHDEQPPQKSEPETTEMP*SAMALP
Trigger: GGGAAGCGCCATGGCACTGCAGGGCATCTCGGTCGT...CTCCGGTTCTGACTTTTGAGGAGGTTGTTCATCATGATCACAACAAGGAACGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382072.6
ENST00000506639.5
CDS-3UTR GCA 90 bp GATAAACGAGCCCCGTTCCTTGTTGTGATCATGATGAACAACCTCCTCAAAAGTGCACTAGCGAGCGCTTaGCCCGGCCCAAGCGGCTCA +
Preference number: 4 (lower is better)
Translates to: DKRAPFLVVIMMNNLLKSALASA*PGPSGS
Trigger: TGAGCCGCTTGGGCCGGGGCAAGCGCTCGCTAGTGC...ACTTTTGAGGAGGTTGTTCATCATGATCACAACAAGGAACGGGGCTCGTTTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382072.6
ENST00000506639.5
CDS-3UTR GCA 90 bp GCCCAGAGACCCACGGGGAAACAGGCCCCGAGTTACTGGATACAGGCAACCCTACTGGCCAATCATCCATaGTCATCTGATTGGGAAGTT +
Preference number: 4 (lower is better)
Translates to: AQRPTGKQAPSYWIQATLLANHP*SSDWEV
Trigger: AACTTCCCAATCAGATGAGCATGGATGATTGGCCAG...TAGGGTTGCCTGTATCCAGTAACTCGGGGCCTGTTTCCCCGTGGGTCTCTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000506639.5
CDS-3UTR CCA 90 bp AAAGGAAAGCTGACAGCCCAGAGACCCACGGGGAAACAGGCCCCGAGTTACTGGTGCCTCACTATCTTCTaGGCTTCTCTGCTCTTTCGT +
Preference number: 4 (lower is better)
Translates to: KGKLTAQRPTGKQAPSYWCLTIF*ASLLFR
Trigger: ACGAAAGAGCAGAGAAGCCCAGAAGATAGTGAGGCA...CCAGTAACTCGGGGCCTGTTTCCCCGTGGGTCTCTGGGCTGTCAGCTTTCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335606.11
3UTR CAA 72 bp GCCAGTGTCTATGTCTCCAAGGTGGGTGCAGCAACTTaGGCTTCTGGGTCCAAGTACACCAGCTTTCCCATC +
Preference number: 4 (lower is better)
Translates to: ASVYVSKVGAAT*ASGSKYTSFPI
Trigger: GATGGGAAAGCTGGTGTACTTGGACCCAGAAGCCAAAGTTGCTGCACCCACCTTGGAGACATAGACACTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335606.11
CDS-3UTR TCA 90 bp AAGCTGACAGCCCAGAGACCCACGGGGAAACAGGCCCCGAGTTACTGGATACAGGCTGTTCCTTCCACCTaGCAAAGCCAAATAGTTGAT +
Preference number: 4 (lower is better)
Translates to: KLTAQRPTGKQAPSYWIQAVPST*QSQIVD
Trigger: ATCAACTATTTGGCTTTGTCAGGTGGAAGGAACAGC...CTGTATCCAGTAACTCGGGGCCTGTTTCCCCGTGGGTCTCTGGGCTGTCAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382072.6
ENST00000506639.5
CDS-3UTR GCA 90 bp AAAGGAAAGCTGACAGCCCAGAGACCCACGGGGAAACAGGCCCCGAGTTACTGGGATTTGACACCACTCTaGCTTCGTCTTCTCTGCAAA +
Preference number: 4 (lower is better)
Translates to: KGKLTAQRPTGKQAPSYWDLTPL*LRLLCK
Trigger: TTTGCAGAGAAGACGAAGGCAGAGTGGTGTCAAATC...CCAGTAACTCGGGGCCTGTTTCCCCGTGGGTCTCTGGGCTGTCAGCTTTCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000506639.5
CDS-3UTR GCA 90 bp GAGAAAGGAAAGCTGACAGCCCAGAGACCCACGGGGAAACAGGCCCCGAGTTACGACAAAAGGCCTGGATaGAACCAATCACTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: EKGKLTAQRPTGKQAPSYDKRPG*NQSLCF
Trigger: GAAACAGAGTGATTGGTTGCATCCAGGCCTTTTGTC...GTAACTCGGGGCCTGTTTCCCCGTGGGTCTCTGGGCTGTCAGCTTTCCTTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000506639.5
CDS-3UTR GCA 90 bp GAGAAAGGAAAGCTGACAGCCCAGAGACCCACGGGGAAACAGGCCCCGAGTTACCACTGCATTTTGTGCTaGCTGTCTGCTCAGATCTAT +
Preference number: 4 (lower is better)
Translates to: EKGKLTAQRPTGKQAPSYHCILC*LSAQIY
Trigger: ATAGATCTGAGCAGACAGGCAGCACAAAATGCAGTG...GTAACTCGGGGCCTGTTTCCCCGTGGGTCTCTGGGCTGTCAGCTTTCCTTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000335606.11
3UTR CAA 72 bp GTGGAATCTACCCCTTCCTCACATGCCTTTAGGAAGTaGAGTCCAGGGAAGCTCCAGGAGCAGGCTGGTTTT +
Preference number: 4 (lower is better)
Translates to: VESTPSSHAFRK*SPGKLQEQAGF
Trigger: AAAACCAGCCTGCTCCTGGAGCTTCCCTGGACTCAACTTCCTAAAGGCATGTGAGGAAGGGGTAGATTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000506639.5
CDS-3UTR TCA 90 bp CCCGAGTTACTGGATACAGGCAACCCTAAAACTGACTGTCCCTCTGGACTCTACGTGCCGTCAAAGATTTaGCACCACTCTGCCTTCGTC +
Preference number: 4 (lower is better)
Translates to: PELLDTGNPKTDCPSGLYVPSKI*HHSAFV
Trigger: GACGAAGGCAGAGTGGTGTCAAATCTTTGACGGCAC...GTAGAGTCCAGAGGGACAGTCAGTTTTAGGGTTGCCTGTATCCAGTAACTCGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000506639.5
CDS-3UTR GCA 90 bp GGTATAAGAAAGGCTTGTAACTTAACTCAGTCCAAGGAGACACAAAACGACTTGGCGGCTCCCCGCGGCTaGTTCAGGTCCAGCACTAGC +
Preference number: 4 (lower is better)
Translates to: GIRKACNLTQSKETQNDLAAPRG*FRSSTS
Trigger: GCTAGTGCTGGACCTGAAGCAGCCGCGGGGAGCCGC...CAAGTCGTTTTGTGTCTCCTTGGACTGAGTTAAGTTACAAGCCTTTCTTATACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000506639.5
CDS-3UTR CCA 90 bp GCCCAGAGACCCACGGGGAAACAGGCCCCGAGTTACTGGATACAGGCAACCCTACCATGCTCATCTGATTaGGAAGTTCATCAGACTTTA +
Preference number: 4 (lower is better)
Translates to: AQRPTGKQAPSYWIQATLPCSSD*EVHQTL
Trigger: TAAAGTCTGATGAACTTCCCAATCAGATGAGCATGG...TAGGGTTGCCTGTATCCAGTAACTCGGGGCCTGTTTCCCCGTGGGTCTCTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000506639.5
CDS-3UTR TCA 90 bp GAGAAAGGAAAGCTGACAGCCCAGAGACCCACGGGGAAACAGGCCCCGAGTTACCAGTTGAAGGCATTCTaGTTCAATACAGGTGAAACT +
Preference number: 4 (lower is better)
Translates to: EKGKLTAQRPTGKQAPSYQLKAF*FNTGET
Trigger: AGTTTCACCTGTATTGAATCAGAATGCCTTCAACTG...GTAACTCGGGGCCTGTTTCCCCGTGGGTCTCTGGGCTGTCAGCTTTCCTTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000506639.5
CDS-3UTR TCA 90 bp AAAGGAAAGCTGACAGCCCAGAGACCCACGGGGAAACAGGCCCCGAGTTACTGGGTTCCTAAAAATGGTTaGAGAACAAGACTGAAGGCT +
Preference number: 4 (lower is better)
Translates to: KGKLTAQRPTGKQAPSYWVPKNG*RTRLKA
Trigger: AGCCTTCAGTCTTGTTCTTCAACCATTTTTAGGAAC...CCAGTAACTCGGGGCCTGTTTCCCCGTGGGTCTCTGGGCTGTCAGCTTTCCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335606.11
ENST00000382072.6
CDS-3UTR TCA 90 bp GAGAAAGGAAAGCTGACAGCCCAGAGACCCACGGGGAAACAGGCCCCGAGTTACGTTCCTAAAAATGGTTaGAGAACAAGACTGAAGGCT +
Preference number: 4 (lower is better)
Translates to: EKGKLTAQRPTGKQAPSYVPKNG*RTRLKA
Trigger: AGCCTTCAGTCTTGTTCTTCAACCATTTTTAGGAAC...GTAACTCGGGGCCTGTTTCCCCGTGGGTCTCTGGGCTGTCAGCTTTCCTTTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335606.11
ENST00000382072.6
CDS-3UTR GCA 90 bp GCAACCAATCACTCTGTTTCACGTGACTTTTATCACCATACAATTTGTGGCATTGCACTAGCGAGCGCTTaGCCCGGCCCAAGCGGCTCA +
Preference number: 4 (lower is better)
Translates to: ATNHSVSRDFYHHTICGIALASA*PGPSGS
Trigger: TGAGCCGCTTGGGCCGGGGCAAGCGCTCGCTAGTGC...AATGCCACAAATTGTATGGTGATAAAAGTCACGTGAAACAGAGTGATTGGTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000506639.5
CDS-3UTR GCA 90 bp GGTATAAGAAAGGCTTGTAACTTAACTCAGTCCAAGGAGACACAAAACGACTTGGCACATCCGACCGCTTaGACAGACGCCGCAGCACGG +
Preference number: 4 (lower is better)
Translates to: GIRKACNLTQSKETQNDLAHPTA*TDAAAR
Trigger: CCGTGCTGCGGCGTCTGTGCAAGCGGTCGGATGTGC...CAAGTCGTTTTGTGTCTCCTTGGACTGAGTTAAGTTACAAGCCTTTCTTATACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000506639.5
CDS-3UTR GCA 90 bp TATTTCGTAGAAACGGAGGTCCAGCCAAGTTCCCCAGGCTGGTCTCGAACTCTTCCTTGCCAGTGCGTGTaGGGTCAAAAAGAGCCATTA +
Preference number: 4 (lower is better)
Translates to: YFVETEVQPSSPGWSRTLPCQCV*GQKEPL
Trigger: TAATGGCTCTTTTTGACCGCACACGCACTGGCAAGG...AAGAGTTCGAGACCAGCCTGGGGAACTTGGCTGGACCTCCGTTTCTACGAAATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335606.11
CDS-3UTR GCA 90 bp ATGGACACCAACATGGAGCAGAAAATGAGGGCAGCAGTGTCCAATCTCATTCCACCTGACCCTTGCCAGTaGGTGTGCGGTCAAAAAGAG +
Preference number: 4 (lower is better)
Translates to: MDTNMEQKMRAAVSNLIPPDPCQ*VCGQKE
Trigger: CTCTTTTTGACCGCACACGCACTGGCAAGGGTCAGG...TGGAATGAGATTGGACACTGCTGCCCTCATTTTCTGCTCCATGTTGGTGTCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335606.11
CDS-3UTR GCA 90 bp AAGCTGACAGCCCAGAGACCCACGGGGAAACAGGCCCCGAGTTACTGGATACAGTGCCTTCGTCTTCTCTaGAAATACATCTGCAAACTT +
Preference number: 4 (lower is better)
Translates to: KLTAQRPTGKQAPSYWIQCLRLL*KYICKL
Trigger: AAGTTTGCAGATGTATTTGCAGAGAAGACGAAGGCA...CTGTATCCAGTAACTCGGGGCCTGTTTCCCCGTGGGTCTCTGGGCTGTCAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000506639.5
CDS-3UTR GCA 90 bp GCCCAGAGACCCACGGGGAAACAGGCCCCGAGTTACTGGATACAGGCAACCCTACTAAAGTTTGGAATGTaGTTAGAGGGAGATCATGAA +
Preference number: 4 (lower is better)
Translates to: AQRPTGKQAPSYWIQATLLKFGM*LEGDHE
Trigger: TTCATGATCTCCCTCTAAGCACATTCCAAACTTTAG...TAGGGTTGCCTGTATCCAGTAACTCGGGGCCTGTTTCCCCGTGGGTCTCTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000506639.5
CDS-3UTR GCA 90 bp CCCGAGTTACTGGATACAGGCAACCCTAAAACTGACTGTCCCTCTGGACTCTACTCTTCTGGGCTTCTCTaGTCTTTCGTCACCAGTGGA +
Preference number: 4 (lower is better)
Translates to: PELLDTGNPKTDCPSGLYSSGLL*SFVTSG
Trigger: TCCACTGGTGACGAAAGAGCAGAGAAGCCCAGAAGA...GTAGAGTCCAGAGGGACAGTCAGTTTTAGGGTTGCCTGTATCCAGTAACTCGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335606.11
CDS-3UTR CCA 90 bp CCCGAGTTACTGGATACAGGCAACCCTAAAACTGACTGTCCCTCTGGACTCTACCAGGCCCCGAGTTACTaGATACAGGCAACCCTAAAA +
Preference number: 4 (lower is better)
Translates to: PELLDTGNPKTDCPSGLYQAPSY*IQATLK
Trigger: TTTTAGGGTTGCCTGTATCCAGTAACTCGGGGCCTG...GTAGAGTCCAGAGGGACAGTCAGTTTTAGGGTTGCCTGTATCCAGTAACTCGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000506639.5
CDS-3UTR TCA 90 bp GAGAAAGGAAAGCTGACAGCCCAGAGACCCACGGGGAAACAGGCCCCGAGTTACTCACTCTGTTTCACGTaGCTTTTATCACCATACAAT +
Preference number: 4 (lower is better)
Translates to: EKGKLTAQRPTGKQAPSYSLCFT*LLSPYN
Trigger: ATTGTATGGTGATAAAAGTCACGTGAAACAGAGTGA...GTAACTCGGGGCCTGTTTCCCCGTGGGTCTCTGGGCTGTCAGCTTTCCTTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000506639.5
CDS-3UTR TCA 90 bp AAAGGAAAGCTGACAGCCCAGAGACCCACGGGGAAACAGGCCCCGAGTTACTGGAACACACAAACACAATaGAACTCAACATCTGTCAGA +
Preference number: 4 (lower is better)
Translates to: KGKLTAQRPTGKQAPSYWNTQTQ*NSTSVR
Trigger: TCTGACAGATGTTGAGTTTCATTGTGTTTGTGTGTT...CCAGTAACTCGGGGCCTGTTTCCCCGTGGGTCTCTGGGCTGTCAGCTTTCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335606.11
ENST00000382072.6
CDS-3UTR TCA 90 bp GAGAAAGGAAAGCTGACAGCCCAGAGACCCACGGGGAAACAGGCCCCGAGTTACAAAGGAATTACTGAGTaGATAAACCATACACACTGC +
Preference number: 4 (lower is better)
Translates to: EKGKLTAQRPTGKQAPSYKGITE*INHTHC
Trigger: GCAGTGTGTATGGTTTATTCACTCAGTAATTCCTTT...GTAACTCGGGGCCTGTTTCCCCGTGGGTCTCTGGGCTGTCAGCTTTCCTTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335606.11
CDS-3UTR TCA 90 bp TGGCCTCAAGTGATCCTCCATGCCTGGGCTGGAAAACATAACCTTATGGGAAAGCCCCAGCAAGTATCATaGTACCTGGCACCTAGTAGA +
Preference number: 4 (lower is better)
Translates to: WPQVILHAWAGKHNLMGKPQQVS*YLAPSR
Trigger: TCTACTAGGTGCCAGGTATCATGATACTTGCTGGGG...CTTTCCCATAAGGTTATGTTTTCCAGCCCAGGCATGGAGGATCACTTGAGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335606.11
CDS-3UTR GCA 90 bp ATTCTTTTCTTGATTAGAGTGGTAGGACACTGTAATACTGTTCCTCCATGTTTCGCGGCTCCCCGCGGCTaGTTCAGGTCCAGCACTAGC +
Preference number: 4 (lower is better)
Translates to: ILFLIRVVGHCNTVPPCFAAPRG*FRSSTS
Trigger: GCTAGTGCTGGACCTGAAGCAGCCGCGGGGAGCCGC...GAAACATGGAGGAACAGTATTACAGTGTCCTACCACTCTAATCAAGAAAAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000502637.5
ENST00000506639.5
CDS-3UTR GCA 90 bp GTTGAGTCCAGGGAAGCTCCAGGAGCAGGCTGGTTTTATGTAAAGACAATCCCGACACACTGCATTTTGTaGTGCCTGTCTGCTCAGATC +
Preference number: 4 (lower is better)
Translates to: VESREAPGAGWFYVKTIPTHCIL*CLSAQI
Trigger: GATCTGAGCAGACAGGCAGCACAAAATGCAGTGTGT...CGGGATTGTCTTTACATAAAACCAGCCTGCTCCTGGAGCTTCCCTGGACTCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335606.11
CDS-3UTR CCA 90 bp GCTCCAGGAGCAGGCTGGTTTTATGTAAAGACAATCCCGTCTTCTTTGTCAAAGATCTCTGGGCCCAGCTaGAGTTTCTCCATGACACCG +
Preference number: 4 (lower is better)
Translates to: APGAGWFYVKTIPSSLSKISGPS*SFSMTP
Trigger: CGGTGTCATGGAGAAACTCCAGCTGGGCCCAGAGAT...CTTTGACAAAGAAGACGGGATTGTCTTTACATAAAACCAGCCTGCTCCTGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000506639.5
CDS-3UTR CCA 90 bp TGGCCTCAAGTGATCCTCCATGCCTGGGCTGGAAAACATAACCTTATGGGAAAGCTTGAGCCGTGGGCCTaGAAGTTAGAGACTAGCTTT +
Preference number: 4 (lower is better)
Translates to: WPQVILHAWAGKHNLMGKLEPWA*KLETSF
Trigger: AAAGCTAGTCTCTAACTTCCAGGCCCACGGCTCAAG...CTTTCCCATAAGGTTATGTTTTCCAGCCCAGGCATGGAGGATCACTTGAGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335606.11
ENST00000382072.6
CDS-3UTR CCA 90 bp CCCGAGTTACTGGATACAGGCAACCCTAAAACTGACTGTCCCTCTGGACTCTACAATTCACTTGAGCCGTaGGCCTGGAAGTTAGAGACT +
Preference number: 4 (lower is better)
Translates to: PELLDTGNPKTDCPSGLYNSLEP*AWKLET
Trigger: AGTCTCTAACTTCCAGGCCCACGGCTCAAGTGAATT...GTAGAGTCCAGAGGGACAGTCAGTTTTAGGGTTGCCTGTATCCAGTAACTCGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000506639.5
CDS-3UTR CCA 90 bp GTTGAGTCCAGGGAAGCTCCAGGAGCAGGCTGGTTTTATGTAAAGACAATCCCGAGCAACTTTGGCTTCTaGGTCCAAGTACACCAGCTT +
Preference number: 4 (lower is better)
Translates to: VESREAPGAGWFYVKTIPSNFGF*VQVHQL
Trigger: AAGCTGGTGTACTTGGACCCAGAAGCCAAAGTTGCT...CGGGATTGTCTTTACATAAAACCAGCCTGCTCCTGGAGCTTCCCTGGACTCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335606.11
3UTR CAA 72 bp GAACGGCAGTTGAGATACTGCGCAGAATGGACCTTATaGATGGCCTACCCAACATCCATTCTCTACTCCCTC +
Preference number: 4 (lower is better)
Translates to: ERQLRYCAEWTL*MAYPTSILYSL
Trigger: GAGGGAGTAGAGAATGGATGTTGGGTAGGCCATCAATAAGGTCCATTCTGCGCAGTATCTCAACTGCCGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335606.11
ENST00000382072.6
3UTR CAA 72 bp AACCGGAGTCACACAGGCATCTGTGCCGTCAAAGATTaGACACCACTCTGCCTTCGTCTTCTCTGCAAATAC +
Preference number: 4 (lower is better)
Translates to: NRSHTGICAVKD*TPLCLRLLCKY
Trigger: GTATTTGCAGAGAAGACGAAGGCAGAGTGGTGTCAAATCTTTGACGGCACAGATGCCTGTGTGACTCCGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382072.6
ENST00000506639.5
CDS-3UTR TCA 90 bp TTAGAGGGAGATCATGAACACCAAGACAAAAGGCCTGGATGCAACCAATCACTCTTTGCATCAATGACCTaGCCCTTGCCAGTGCGTGTG +
Preference number: 4 (lower is better)
Translates to: LEGDHEHQDKRPGCNQSLFASMT*PLPVRV
Trigger: CACACGCACTGGCAAGGGTCAGGTCATTGATGCAAA...GAGTGATTGGTTGCATCCAGGCCTTTTGTCTTGGTGTTCATGATCTCCCTCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335606.11
CDS-3UTR TCA 90 bp GCTCCAGGAGCAGGCTGGTTTTATGTAAAGACAATCCCGTCTTCTTTGTCAAAGTTGCTCCAACAGCCATaGATTCCCCATCTGCTGTCC +
Preference number: 4 (lower is better)
Translates to: APGAGWFYVKTIPSSLSKLLQQP*IPHLLS
Trigger: GGACAGCAGATGGGGAATTCATGGCTGTTGGAGCAA...CTTTGACAAAGAAGACGGGATTGTCTTTACATAAAACCAGCCTGCTCCTGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000506639.5
CDS-3UTR TCA 90 bp GGCAACCCTAAAACTGACTGTCCCTCTGGACTCTACGTAGTGAGCCAACACATTGTATTCAAATTCACTTaGGCCGTGGGCCTGGAAGTT +
Preference number: 4 (lower is better)
Translates to: GNPKTDCPSGLYVVSQHIVFKFT*AVGLEV
Trigger: AACTTCCAGGCCCACGGCTCAAGTGAATTTGAATAC...AATGTGTTGGCTCACTACGTAGAGTCCAGAGGGACAGTCAGTTTTAGGGTTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000506639.5
CDS-3UTR TCA 90 bp TATTTCGTAGAAACGGAGGTCCAGCCAAGTTCCCCAGGCTGGTCTCGAACTCTTTTTCTTTCTTCTCCCTaGGGTATTACTGCCAGTGTC +
Preference number: 4 (lower is better)
Translates to: YFVETEVQPSSPGWSRTLFLSSP*GITASV
Trigger: GACACTGGCAGTAATACCTCAGGGAGAAGAAAGAAA...AAGAGTTCGAGACCAGCCTGGGGAACTTGGCTGGACCTCCGTTTCTACGAAATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335606.11
CDS-3UTR TCA 90 bp CCCGAGTTACTGGATACAGGCAACCCTAAAACTGACTGTCCCTCTGGACTCTACGCTGTTCCTTCCACCTaGCAAAGCCAAATAGTTGAT +
Preference number: 4 (lower is better)
Translates to: PELLDTGNPKTDCPSGLYAVPST*QSQIVD
Trigger: ATCAACTATTTGGCTTTGTCAGGTGGAAGGAACAGC...GTAGAGTCCAGAGGGACAGTCAGTTTTAGGGTTGCCTGTATCCAGTAACTCGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382072.6
ENST00000506639.5
CDS-3UTR GCA 90 bp TCAGAGTCTGTAATTCTTTTCTTGATTAGAGTGGTAGGACACTGTAATACTGTTGCACTAGCGAGCGCTTaGCCCGGCCCAAGCGGCTCA +
Preference number: 4 (lower is better)
Translates to: SESVILFLIRVVGHCNTVALASA*PGPSGS
Trigger: TGAGCCGCTTGGGCCGGGGCAAGCGCTCGCTAGTGC...AACAGTATTACAGTGTCCTACCACTCTAATCAAGAAAAGAATTACAGACTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000502637.5
ENST00000506639.5
CDS-3UTR GCA 90 bp ATTCTTTTCTTGATTAGAGTGGTAGGACACTGTAATACTGTTCCTCCATGTTTCGCACATCCGACCGCTTaGACAGACGCCGCAGCACGG +
Preference number: 4 (lower is better)
Translates to: ILFLIRVVGHCNTVPPCFAHPTA*TDAAAR
Trigger: CCGTGCTGCGGCGTCTGTGCAAGCGGTCGGATGTGC...GAAACATGGAGGAACAGTATTACAGTGTCCTACCACTCTAATCAAGAAAAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000502637.5
ENST00000506639.5
CDS-3UTR GCA 90 bp ACACCAAGACAAAAGGCCTGGATGCAACCAATCACTCTGTTTCACGTGACTTTTCTTGGATTTTCCCGCTaGAGAATCTCTGGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: TPRQKAWMQPITLFHVTFLGFSR*RISGPS
Trigger: GCTGGGCCCAGAGATTCTGCAGCGGGAAAATCCAAG...AAAAGTCACGTGAAACAGAGTGATTGGTTGCATCCAGGCCTTTTGTCTTGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000506639.5
CDS-3UTR GCA 90 bp GGCAACCCTAAAACTGACTGTCCCTCTGGACTCTACGTAGTGAGCCAACACATTGTTCTGTCCTCGAGGTaGTTCCCACAGACTCAATTT +
Preference number: 4 (lower is better)
Translates to: GNPKTDCPSGLYVVSQHIVLSSR*FPQTQF
Trigger: AAATTGAGTCTGTGGGAAGCACCTCGAGGACAGAAC...AATGTGTTGGCTCACTACGTAGAGTCCAGAGGGACAGTCAGTTTTAGGGTTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000506639.5
CDS-3UTR GCA 90 bp CAGCTTTCCCATCACCCCTGCAACCATAGGAGTGGTCTTGGCTTCCTAGTTATGGAACTGGGGTTCTATTaGTCCAACAGCCATGAATTC +
Preference number: 4 (lower is better)
Translates to: QLSHHPCNHRSGLGFLVMELGFY*SNSHEF
Trigger: GAATTCATGGCTGTTGGAGCAATAGAACCCCAGTTC...CATAACTAGGAAGCCAAGACCACTCCTATGGTTGCAGGGGTGATGGGAAAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335606.11
CDS-3UTR TCA 90 bp TTAGAGGGAGATCATGAACACCAAGACAAAAGGCCTGGATGCAACCAATCACTCCCATATTTGCATCAATaGCCTGACCCTTGCCAGTGC +
Preference number: 4 (lower is better)
Translates to: LEGDHEHQDKRPGCNQSLPYLHQ*PDPCQC
Trigger: GCACTGGCAAGGGTCAGGTCATTGATGCAAATATGG...GAGTGATTGGTTGCATCCAGGCCTTTTGTCTTGGTGTTCATGATCTCCCTCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335606.11
CDS-3UTR TCA 90 bp TGGCCTCAAGTGATCCTCCATGCCTGGGCTGGAAAACATAACCTTATGGGAAAGTTAGTCCAAGTCCTTTaGTCAGCAGCTCGTAGAACT +
Preference number: 4 (lower is better)
Translates to: WPQVILHAWAGKHNLMGKLVQVL*SAARRT
Trigger: AGTTCTACGAGCTGCTGATCAAAGGACTTGGACTAA...CTTTCCCATAAGGTTATGTTTTCCAGCCCAGGCATGGAGGATCACTTGAGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335606.11
ENST00000382072.6
CDS-3UTR TCA 90 bp ACACCAAGACAAAAGGCCTGGATGCAACCAATCACTCTGTTTCACGTGACTTTTGTGCCGTCAAAGATTTaGCACCACTCTGCCTTCGTC +
Preference number: 4 (lower is better)
Translates to: TPRQKAWMQPITLFHVTFVPSKI*HHSAFV
Trigger: GACGAAGGCAGAGTGGTGTCAAATCTTTGACGGCAC...AAAAGTCACGTGAAACAGAGTGATTGGTTGCATCCAGGCCTTTTGTCTTGGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000506639.5
CDS-3UTR TCA 90 bp TTATTGATGGCCTACCCAACATCCATTCTCTACTCCCTCTACTCTGATGGCACCGTATTCAAATTCACTTaGGCCGTGGGCCTGGAAGTT +
Preference number: 4 (lower is better)
Translates to: LLMAYPTSILYSLYSDGTVFKFT*AVGLEV
Trigger: AACTTCCAGGCCCACGGCTCAAGTGAATTTGAATAC...GGTGCCATCAGAGTAGAGGGAGTAGAGAATGGATGTTGGGTAGGCCATCAATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335606.11
ENST00000382072.6
CDS-3UTR TCA 90 bp ACACCAAGACAAAAGGCCTGGATGCAACCAATCACTCTGTTTCACGTGACTTTTATGCCTTTAGGAAGTTaGGTCCAGGGAAGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: TPRQKAWMQPITLFHVTFMPLGS*VQGSSR
Trigger: CCTGGAGCTTCCCTGGACTCAACTTCCTAAAGGCAT...AAAAGTCACGTGAAACAGAGTGATTGGTTGCATCCAGGCCTTTTGTCTTGGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000506639.5
CDS-3UTR TCA 90 bp GATAAACGAGCCCCGTTCCTTGTTGTGATCATGATGAACAACCTCCTCAAAAGTATGCCTTTAGGAAGTTaGGTCCAGGGAAGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: DKRAPFLVVIMMNNLLKSMPLGS*VQGSSR
Trigger: CCTGGAGCTTCCCTGGACTCAACTTCCTAAAGGCAT...ACTTTTGAGGAGGTTGTTCATCATGATCACAACAAGGAACGGGGCTCGTTTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382072.6
ENST00000506639.5
CDS-3UTR GCA 90 bp ATTCTTTTCTTGATTAGAGTGGTAGGACACTGTAATACTGTTCCTCCATGTTTCACGACCGAGATGCCCTaGAGTGCCATGGCGCTTCCC +
Preference number: 4 (lower is better)
Translates to: ILFLIRVVGHCNTVPPCFTTEMP*SAMALP
Trigger: GGGAAGCGCCATGGCACTGCAGGGCATCTCGGTCGT...GAAACATGGAGGAACAGTATTACAGTGTCCTACCACTCTAATCAAGAAAAGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000502637.5
ENST00000506639.5
CDS-3UTR GCA 90 bp GTTGAGTCCAGGGAAGCTCCAGGAGCAGGCTGGTTTTATGTAAAGACAATCCCGTCCTTCCACCATATTTaGATCAATGACCTGACCCTT +
Preference number: 4 (lower is better)
Translates to: VESREAPGAGWFYVKTIPSFHHI*INDLTL
Trigger: AAGGGTCAGGTCATTGATGCAAATATGGTGGAAGGA...CGGGATTGTCTTTACATAAAACCAGCCTGCTCCTGGAGCTTCCCTGGACTCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335606.11
CDS-3UTR GCA 90 bp TTATTGATGGCCTACCCAACATCCATTCTCTACTCCCTCTACTCTGATGGCACCGTTCTGTCCTCGAGGTaGTTCCCACAGACTCAATTT +
Preference number: 4 (lower is better)
Translates to: LLMAYPTSILYSLYSDGTVLSSR*FPQTQF
Trigger: AAATTGAGTCTGTGGGAAGCACCTCGAGGACAGAAC...GGTGCCATCAGAGTAGAGGGAGTAGAGAATGGATGTTGGGTAGGCCATCAATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335606.11
ENST00000382072.6
CDS-3UTR GCA 90 bp TATTTCGTAGAAACGGAGGTCCAGCCAAGTTCCCCAGGCTGGTCTCGAACTCTTATAAGATCCAGAACTTaGTACCAGCCTGAGGAGAAA +
Preference number: 4 (lower is better)
Translates to: YFVETEVQPSSPGWSRTLIRSRT*YQPEEK
Trigger: TTTCTCCTCAGGCTGGTAGCAAGTTCTGGATCTTAT...AAGAGTTCGAGACCAGCCTGGGGAACTTGGCTGGACCTCCGTTTCTACGAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335606.11
ENST00000382072.6
CDS-3UTR CCA 90 bp CAGCTTTCCCATCACCCCTGCAACCATAGGAGTGGTCTTGGCTTCCTAGTTATGGGCATAAATAAGCCTTaGATTTTCCCGCTGCAGAAT +
Preference number: 4 (lower is better)
Translates to: QLSHHPCNHRSGLGFLVMGINKP*IFPLQN
Trigger: ATTCTGCAGCGGGAAAATCCAAGGCTTATTTATGCC...CATAACTAGGAAGCCAAGACCACTCCTATGGTTGCAGGGGTGATGGGAAAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335606.11
CDS-3UTR CCA 90 bp GGGGGTCCTGAGATCTTTATTTCTGGATGTTGCTGTGTGTTGGGTATAAGATCCCTTGAGCCGTGGGCCTaGAAGTTAGAGACTAGCTTT +
Preference number: 4 (lower is better)
Translates to: GGPEIFISGCCCVLGIRSLEPWA*KLETSF
Trigger: AAAGCTAGTCTCTAACTTCCAGGCCCACGGCTCAAG...GGATCTTATACCCAACACACAGCAACATCCAGAAATAAAGATCTCAGGACCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000506639.5
CDS-3UTR CCA 90 bp TTATTGATGGCCTACCCAACATCCATTCTCTACTCCCTCTACTCTGATGGCACCAATTCACTTGAGCCGTaGGCCTGGAAGTTAGAGACT +
Preference number: 4 (lower is better)
Translates to: LLMAYPTSILYSLYSDGTNSLEP*AWKLET
Trigger: AGTCTCTAACTTCCAGGCCCACGGCTCAAGTGAATT...GGTGCCATCAGAGTAGAGGGAGTAGAGAATGGATGTTGGGTAGGCCATCAATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335606.11
ENST00000382072.6
CDS-3UTR CCA 90 bp CTCAGTGTGTTCTCCTATGAAAGGATCCCTTTTGAAAGAAGGGATGGCTGGGGTCCAAGACAAAAGGCCTaGATGCAACCAATCACTCTG +
Preference number: 4 (lower is better)
Translates to: LSVFSYERIPFERRDGWGPRQKA*MQPITL
Trigger: CAGAGTGATTGGTTGCATCCAGGCCTTTTGTCTTGG...ACCCCAGCCATCCCTTCTTTCAAAAGGGATCCTTTCATAGGAGAACACACTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000382072.6
ENST00000506639.5
CDS-3UTR CCA 90 bp GCTCCAGGAGCAGGCTGGTTTTATGTAAAGACAATCCCGTCTTCTTTGTCAAAGCAGGCCCCGAGTTACTaGATACAGGCAACCCTAAAA +
Preference number: 4 (lower is better)
Translates to: APGAGWFYVKTIPSSLSKQAPSY*IQATLK
Trigger: TTTTAGGGTTGCCTGTATCCAGTAACTCGGGGCCTG...CTTTGACAAAGAAGACGGGATTGTCTTTACATAAAACCAGCCTGCTCCTGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000506639.5
CDS-3UTR CCA 90 bp TGGCCTCAAGTGATCCTCCATGCCTGGGCTGGAAAACATAACCTTATGGGAAAGGCTCCAGGAGCAGGCTaGTTTTATGTAAAGACAATC +
Preference number: 4 (lower is better)
Translates to: WPQVILHAWAGKHNLMGKAPGAG*FYVKTI
Trigger: GATTGTCTTTACATAAAACCAGCCTGCTCCTGGAGC...CTTTCCCATAAGGTTATGTTTTCCAGCCCAGGCATGGAGGATCACTTGAGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335606.11
ENST00000382072.6
CDS-3UTR CCA 90 bp GTTGAGTCCAGGGAAGCTCCAGGAGCAGGCTGGTTTTATGTAAAGACAATCCCGGTGCTCTTTATCTTATaGGGCTACATTTCCAGGGTT +
Preference number: 4 (lower is better)
Translates to: VESREAPGAGWFYVKTIPVLFIL*GYISRV
Trigger: AACCCTGGAAATGTAGCCCCATAAGATAAAGAGCAC...CGGGATTGTCTTTACATAAAACCAGCCTGCTCCTGGAGCTTCCCTGGACTCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335606.11
CDS-3UTR TCA 90 bp GCAACCAATCACTCTGTTTCACGTGACTTTTATCACCATACAATTTGTGGCATTCCGGCAGAAGCTTCCTaGCTGGCCAAATCCACTCAG +
Preference number: 4 (lower is better)
Translates to: ATNHSVSRDFYHHTICGIPAEAS*LAKSTQ
Trigger: CTGAGTGGATTTGGCCAGTCAGGAAGCTTCTGCCGG...AATGCCACAAATTGTATGGTGATAAAAGTCACGTGAAACAGAGTGATTGGTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000506639.5
CDS-3UTR TCA 90 bp TTACTGGATACAGGCAACCCTAAAACTGACTGTCCCTCTGGACTCTACGTAGTGACAAAGCCAAATAGTTaGTATCGTGGCCAGCTAACC +
Preference number: 4 (lower is better)
Translates to: LLDTGNPKTDCPSGLYVVTKPNS*YRGQLT
Trigger: GGTTAGCTGGCCACGATATCAACTATTTGGCTTTGT...CACTACGTAGAGTCCAGAGGGACAGTCAGTTTTAGGGTTGCCTGTATCCAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000506639.5
CDS-3UTR TCA 90 bp CTCAGTGTGTTCTCCTATGAAAGGATCCCTTTTGAAAGAAGGGATGGCTGGGGTACAAAGCCAAATAGTTaGTATCGTGGCCAGCTAACC +
Preference number: 4 (lower is better)
Translates to: LSVFSYERIPFERRDGWGTKPNS*YRGQLT
Trigger: GGTTAGCTGGCCACGATATCAACTATTTGGCTTTGT...ACCCCAGCCATCCCTTCTTTCAAAAGGGATCCTTTCATAGGAGAACACACTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382072.6
ENST00000506639.5
CDS-3UTR TCA 90 bp ATGGACACCAACATGGAGCAGAAAATGAGGGCAGCAGTGTCCAATCTCATTCCATTAGTCCAAGTCCTTTaGTCAGCAGCTCGTAGAACT +
Preference number: 4 (lower is better)
Translates to: MDTNMEQKMRAAVSNLIPLVQVL*SAARRT
Trigger: AGTTCTACGAGCTGCTGATCAAAGGACTTGGACTAA...TGGAATGAGATTGGACACTGCTGCCCTCATTTTCTGCTCCATGTTGGTGTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335606.11
ENST00000382072.6
CDS-3UTR TCA 90 bp ATGGACACCAACATGGAGCAGAAAATGAGGGCAGCAGTGTCCAATCTCATTCCATCATCCATGCTCATCTaGTTGGGAAGTTCATCAGAC +
Preference number: 4 (lower is better)
Translates to: MDTNMEQKMRAAVSNLIPSSMLI*LGSSSD
Trigger: GTCTGATGAACTTCCCAATCAGATGAGCATGGATGA...TGGAATGAGATTGGACACTGCTGCCCTCATTTTCTGCTCCATGTTGGTGTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335606.11
ENST00000382072.6
CDS-3UTR TCA 90 bp TTACTGGATACAGGCAACCCTAAAACTGACTGTCCCTCTGGACTCTACGTAGTGTCATCCATGCTCATCTaGTTGGGAAGTTCATCAGAC +
Preference number: 4 (lower is better)
Translates to: LLDTGNPKTDCPSGLYVVSSMLI*LGSSSD
Trigger: GTCTGATGAACTTCCCAATCAGATGAGCATGGATGA...CACTACGTAGAGTCCAGAGGGACAGTCAGTTTTAGGGTTGCCTGTATCCAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000506639.5
CDS-3UTR TCA 90 bp ATCATGATGAACAACCTCCTCAAAAGTCAGAACCGGAGTCACACAGGCATCTGTGTATTCAAATTCACTTaGGCCGTGGGCCTGGAAGTT +
Preference number: 4 (lower is better)
Translates to: IMMNNLLKSQNRSHTGICVFKFT*AVGLEV
Trigger: AACTTCCAGGCCCACGGCTCAAGTGAATTTGAATAC...ACAGATGCCTGTGTGACTCCGGTTCTGACTTTTGAGGAGGTTGTTCATCATGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382072.6
ENST00000506639.5
CDS-3UTR TCA 90 bp GGGGGTCCTGAGATCTTTATTTCTGGATGTTGCTGTGTGTTGGGTATAAGATCCCTTAGAGGGAGATCATaGACACCAAGACAAAAGGCC +
Preference number: 4 (lower is better)
Translates to: GGPEIFISGCCCVLGIRSLRGRS*TPRQKA
Trigger: GGCCTTTTGTCTTGGTGTTCATGATCTCCCTCTAAG...GGATCTTATACCCAACACACAGCAACATCCAGAAATAAAGATCTCAGGACCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000506639.5
CDS-3UTR TCA 90 bp GTTGAGTCCAGGGAAGCTCCAGGAGCAGGCTGGTTTTATGTAAAGACAATCCCGCAGTTGAAGGCATTCTaGTTCAATACAGGTGAAACT +
Preference number: 4 (lower is better)
Translates to: VESREAPGAGWFYVKTIPQLKAF*FNTGET
Trigger: AGTTTCACCTGTATTGAATCAGAATGCCTTCAACTG...CGGGATTGTCTTTACATAAAACCAGCCTGCTCCTGGAGCTTCCCTGGACTCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000506639.5
CDS-3UTR TCA 90 bp GGCATCTGTGCCGTCAAAGATTTGACACCACTCTGCCTTCGTCTTCTCTGCAAAACTAAGAAGCCCTTCTaGGTCTCTGTTTTCTCAACT +
Preference number: 4 (lower is better)
Translates to: GICAVKDLTPLCLRLLCKTKKPF*VSVFST
Trigger: AGTTGAGAAAACAGAGACTCAGAAGGGCTTCTTAGT...TTTGCAGAGAAGACGAAGGCAGAGTGGTGTCAAATCTTTGACGGCACAGATGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382072.6
CDS-3UTR GCA 90 bp CTCAGTGTGTTCTCCTATGAAAGGATCCCTTTTGAAAGAAGGGATGGCTGGGGTGACAAAAGGCCTGGATaGAACCAATCACTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: LSVFSYERIPFERRDGWGDKRPG*NQSLCF
Trigger: GAAACAGAGTGATTGGTTGCATCCAGGCCTTTTGTC...ACCCCAGCCATCCCTTCTTTCAAAAGGGATCCTTTCATAGGAGAACACACTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000382072.6
ENST00000506639.5
CDS-3UTR GCA 90 bp GGGGGTCCTGAGATCTTTATTTCTGGATGTTGCTGTGTGTTGGGTATAAGATCCTGTTCCTATCAGGGTTaGCTCACTATCTTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: GGPEIFISGCCCVLGIRSCSYQG*LTIFWA
Trigger: AGCCCAGAAGATAGTGAGGCAACCCTGATAGGAACA...GGATCTTATACCCAACACACAGCAACATCCAGAAATAAAGATCTCAGGACCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000335606.11
CDS-3UTR GCA 90 bp TCAGAGTCTGTAATTCTTTTCTTGATTAGAGTGGTAGGACACTGTAATACTGTTCCCAGCCCAGCAGCCTaGAAGAAGCCCTCCCAATCC +
Preference number: 4 (lower is better)
Translates to: SESVILFLIRVVGHCNTVPSPAA*KKPSQS
Trigger: GGATTGGGAGGGCTTCTTGCAGGCTGCTGGGCTGGG...AACAGTATTACAGTGTCCTACCACTCTAATCAAGAAAAGAATTACAGACTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502637.5
CDS-3UTR CCA 90 bp TTAGAGGGAGATCATGAACACCAAGACAAAAGGCCTGGATGCAACCAATCACTCTCTATGTCTCCAAGGTaGGTGCAGCAACTTTGGCTT +
Preference number: 4 (lower is better)
Translates to: LEGDHEHQDKRPGCNQSLSMSPR*VQQLWL
Trigger: AAGCCAAAGTTGCTGCACCCACCTTGGAGACATAGA...GAGTGATTGGTTGCATCCAGGCCTTTTGTCTTGGTGTTCATGATCTCCCTCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335606.11
CDS-3UTR CCA 90 bp ATGGACACCAACATGGAGCAGAAAATGAGGGCAGCAGTGTCCAATCTCATTCCAGGTTCCCTTGTTTTCTaGCTTCTAGGTAGATTTGGC +
Preference number: 4 (lower is better)
Translates to: MDTNMEQKMRAAVSNLIPGSLVF*LLGRFG
Trigger: GCCAAATCTACCTAGAAGCCAGAAAACAAGGGAACC...TGGAATGAGATTGGACACTGCTGCCCTCATTTTCTGCTCCATGTTGGTGTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335606.11
CDS-3UTR TCA 90 bp ATTCTTTTCTTGATTAGAGTGGTAGGACACTGTAATACTGTTCCTCCATGTTTCCCGGCAGAAGCTTCCTaGCTGGCCAAATCCACTCAG +
Preference number: 4 (lower is better)
Translates to: ILFLIRVVGHCNTVPPCFPAEAS*LAKSTQ
Trigger: CTGAGTGGATTTGGCCAGTCAGGAAGCTTCTGCCGG...GAAACATGGAGGAACAGTATTACAGTGTCCTACCACTCTAATCAAGAAAAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000502637.5
ENST00000506639.5
CDS-3UTR TCA 90 bp GGTATAAGAAAGGCTTGTAACTTAACTCAGTCCAAGGAGACACAAAACGACTTGTTGCTCCAACAGCCATaGATTCCCCATCTGCTGTCC +
Preference number: 4 (lower is better)
Translates to: GIRKACNLTQSKETQNDLLLQQP*IPHLLS
Trigger: GGACAGCAGATGGGGAATTCATGGCTGTTGGAGCAA...CAAGTCGTTTTGTGTCTCCTTGGACTGAGTTAAGTTACAAGCCTTTCTTATACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000506639.5
CDS-3UTR TCA 90 bp GGCAACCCTAAAACTGACTGTCCCTCTGGACTCTACGTAGTGAGCCAACACATTAAATCTCTTCGCGGCTaGATCCAAATTCTTCAAGTA +
Preference number: 4 (lower is better)
Translates to: GNPKTDCPSGLYVVSQHIKSLRG*IQILQV
Trigger: TACTTGAAGAATTTGGATTCAGCCGCGAAGAGATTT...AATGTGTTGGCTCACTACGTAGAGTCCAGAGGGACAGTCAGTTTTAGGGTTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000506639.5
CDS-3UTR TCA 90 bp CATGATGAACAACCTCCTCAAAAGTCAGAACCGGAGTCACACAGGCATCTGTGCAAATCTCTTCGCGGCTaGATCCAAATTCTTCAAGTA +
Preference number: 4 (lower is better)
Translates to: HDEQPPQKSEPESHRHLCKSLRG*IQILQV
Trigger: TACTTGAAGAATTTGGATTCAGCCGCGAAGAGATTT...GCACAGATGCCTGTGTGACTCCGGTTCTGACTTTTGAGGAGGTTGTTCATCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382072.6
ENST00000506639.5
CDS-3UTR GCA 90 bp TGGATGCAACCAATCACTCTGTTTCACGTGACTTTTATCACCATACAATTTGTGCTTGGATTTTCCCGCTaGAGAATCTCTGGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: WMQPITLFHVTFITIQFVLGFSR*RISGPS
Trigger: GCTGGGCCCAGAGATTCTGCAGCGGGAAAATCCAAG...CACAAATTGTATGGTGATAAAAGTCACGTGAAACAGAGTGATTGGTTGCATCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000506639.5
CDS-3UTR GCA 90 bp TTATTGATGGCCTACCCAACATCCATTCTCTACTCCCTCTACTCTGATGGCACCAGTCGTATAGAAAGGTaGTCCACCATCCAACATGTT +
Preference number: 4 (lower is better)
Translates to: LLMAYPTSILYSLYSDGTSRIER*STIQHV
Trigger: AACATGTTGGATGGTGGAGCACCTTTCTATACGACT...GGTGCCATCAGAGTAGAGGGAGTAGAGAATGGATGTTGGGTAGGCCATCAATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335606.11
ENST00000382072.6
CDS-3UTR GCA 90 bp TCCAAGTACACCAGCTTTCCCATCACCCCTGCAACCATAGGAGTGGTCTTGGCTTCCTCCATGTTTCCATaGATACAATGTTATGTGTTA +
Preference number: 4 (lower is better)
Translates to: SKYTSFPITPATIGVVLASSMFP*IQCYVL
Trigger: TAACACATAACATTGTATGCATGGAAACATGGAGGA...AGCCAAGACCACTCCTATGGTTGCAGGGGTGATGGGAAAGCTGGTGTACTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335606.11
CDS-3UTR GCA 90 bp ATCATGATGAACAACCTCCTCAAAAGTCAGAACCGGAGTCACACAGGCATCTGTGACAAAAGGCCTGGATaGAACCAATCACTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: IMMNNLLKSQNRSHTGICDKRPG*NQSLCF
Trigger: GAAACAGAGTGATTGGTTGCATCCAGGCCTTTTGTC...ACAGATGCCTGTGTGACTCCGGTTCTGACTTTTGAGGAGGTTGTTCATCATGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382072.6
ENST00000506639.5
CDS-3UTR GCA 90 bp TATTTCGTAGAAACGGAGGTCCAGCCAAGTTCCCCAGGCTGGTCTCGAACTCTTCTAAAGTTTGGAATGTaGTTAGAGGGAGATCATGAA +
Preference number: 4 (lower is better)
Translates to: YFVETEVQPSSPGWSRTLLKFGM*LEGDHE
Trigger: TTCATGATCTCCCTCTAAGCACATTCCAAACTTTAG...AAGAGTTCGAGACCAGCCTGGGGAACTTGGCTGGACCTCCGTTTCTACGAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335606.11
ENST00000382072.6
CDS-3UTR GCA 90 bp TTATTGATGGCCTACCCAACATCCATTCTCTACTCCCTCTACTCTGATGGCACCCTGCCCCTTCCTAGTTaGATATTCCTGAGCAAATAT +
Preference number: 4 (lower is better)
Translates to: LLMAYPTSILYSLYSDGTLPLPS*IFLSKY
Trigger: ATATTTGCTCAGGAATATGCAACTAGGAAGGGGCAG...GGTGCCATCAGAGTAGAGGGAGTAGAGAATGGATGTTGGGTAGGCCATCAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335606.11
ENST00000382072.6
CDS-3UTR GCA 90 bp CCCGTTCCTTGTTGTGATCATGATGAACAACCTCCTCAAAAGTCAGAACCGGAGGGACGCAGCAGAGTATaGACCTTAAAAAGATTTTGC +
Preference number: 4 (lower is better)
Translates to: PVPCCDHDEQPPQKSEPEGRSRV*TLKRFC
Trigger: GCAAAATCTTTTTAAGGTGCATACTCTGCTGCGTCC...CTCCGGTTCTGACTTTTGAGGAGGTTGTTCATCATGATCACAACAAGGAACGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000506639.5
CDS-3UTR CCA 90 bp GCAACCAATCACTCTGTTTCACGTGACTTTTATCACCATACAATTTGTGGCATTATCTCTGGGCCCAGCTaGAGTTTCTCCATGACACCG +
Preference number: 4 (lower is better)
Translates to: ATNHSVSRDFYHHTICGIISGPS*SFSMTP
Trigger: CGGTGTCATGGAGAAACTCCAGCTGGGCCCAGAGAT...AATGCCACAAATTGTATGGTGATAAAAGTCACGTGAAACAGAGTGATTGGTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000506639.5
CDS-3UTR CCA 90 bp GGCATCTGTGCCGTCAAAGATTTGACACCACTCTGCCTTCGTCTTCTCTGCAAACCATGCTCATCTGATTaGGAAGTTCATCAGACTTTA +
Preference number: 4 (lower is better)
Translates to: GICAVKDLTPLCLRLLCKPCSSD*EVHQTL
Trigger: TAAAGTCTGATGAACTTCCCAATCAGATGAGCATGG...TTTGCAGAGAAGACGAAGGCAGAGTGGTGTCAAATCTTTGACGGCACAGATGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382072.6
ENST00000506639.5
CDS-3UTR CCA 90 bp ACACCAAGACAAAAGGCCTGGATGCAACCAATCACTCTGTTTCACGTGACTTTTAATTCACTTGAGCCGTaGGCCTGGAAGTTAGAGACT +
Preference number: 4 (lower is better)
Translates to: TPRQKAWMQPITLFHVTFNSLEP*AWKLET
Trigger: AGTCTCTAACTTCCAGGCCCACGGCTCAAGTGAATT...AAAAGTCACGTGAAACAGAGTGATTGGTTGCATCCAGGCCTTTTGTCTTGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000506639.5
CDS-3UTR CCA 90 bp GGCATCTGTGCCGTCAAAGATTTGACACCACTCTGCCTTCGTCTTCTCTGCAAAACTGTTGCTAAAGTTTaGAATGTGCTTAGAGGGAGA +
Preference number: 4 (lower is better)
Translates to: GICAVKDLTPLCLRLLCKTVAKV*NVLRGR
Trigger: TCTCCCTCTAAGCACATTCCAAACTTTAGCAACAGT...TTTGCAGAGAAGACGAAGGCAGAGTGGTGTCAAATCTTTGACGGCACAGATGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382072.6
ENST00000506639.5
CDS-3UTR CCA 90 bp ATGGACACCAACATGGAGCAGAAAATGAGGGCAGCAGTGTCCAATCTCATTCCACTAGATTTAAAATGGTaGCAGGTCACACCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: MDTNMEQKMRAAVSNLIPLDLKW*QVTPFF
Trigger: GAAGAAGGGTGTGACCTGCCACCATTTTAAATCTAG...TGGAATGAGATTGGACACTGCTGCCCTCATTTTCTGCTCCATGTTGGTGTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335606.11
3UTR CAA 72 bp GGTCCTGAGATCTTTATTTCTGGATGTTGCTGTGTGTaGGGTATAAGATCCAGAACTTGCTACCAGCCTGAG +
Preference number: 4 (lower is better)
Translates to: GPEIFISGCCCV*GIRSRTCYQPE
Trigger: CTCAGGCTGGTAGCAAGTTCTGGATCTTATACCCAACACACAGCAACATCCAGAAATAAAGATCTCAGGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000506639.5
3UTR CAA 72 bp ATCTCCTCAGTGTGTTCTCCTATGAAAGGATCCCTTTaGAAAGAAGGGATGGCTGGGGTGTTTAACAGCAGA +
Preference number: 4 (lower is better)
Translates to: ISSVCSPMKGSL*KEGMAGVFNSR
Trigger: TCTGCTGTTAAACACCCCAGCCATCCCTTCTTTCAAAAGGGATCCTTTCATAGGAGAACACACTGAGGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382072.6
ENST00000506639.5
CDS-3UTR TCA 90 bp TCAGAGTCTGTAATTCTTTTCTTGATTAGAGTGGTAGGACACTGTAATACTGTTCCGGCAGAAGCTTCCTaGCTGGCCAAATCCACTCAG +
Preference number: 4 (lower is better)
Translates to: SESVILFLIRVVGHCNTVPAEAS*LAKSTQ
Trigger: CTGAGTGGATTTGGCCAGTCAGGAAGCTTCTGCCGG...AACAGTATTACAGTGTCCTACCACTCTAATCAAGAAAAGAATTACAGACTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000502637.5
ENST00000506639.5
CDS-3UTR TCA 90 bp GCAACCAATCACTCTGTTTCACGTGACTTTTATCACCATACAATTTGTGGCATTTTGCTCCAACAGCCATaGATTCCCCATCTGCTGTCC +
Preference number: 4 (lower is better)
Translates to: ATNHSVSRDFYHHTICGILLQQP*IPHLLS
Trigger: GGACAGCAGATGGGGAATTCATGGCTGTTGGAGCAA...AATGCCACAAATTGTATGGTGATAAAAGTCACGTGAAACAGAGTGATTGGTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000506639.5
CDS-3UTR GCA 90 bp ATTCTTTTCTTGATTAGAGTGGTAGGACACTGTAATACTGTTCCTCCATGTTTCCCTGACCCTTGCCAGTaGGTGTGCGGTCAAAAAGAG +
Preference number: 4 (lower is better)
Translates to: ILFLIRVVGHCNTVPPCFPDPCQ*VCGQKE
Trigger: CTCTTTTTGACCGCACACGCACTGGCAAGGGTCAGG...GAAACATGGAGGAACAGTATTACAGTGTCCTACCACTCTAATCAAGAAAAGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335606.11
ENST00000502637.5
CDS-3UTR GCA 90 bp TCAGAGTCTGTAATTCTTTTCTTGATTAGAGTGGTAGGACACTGTAATACTGTTCGGGGGCTCACGTCCTaGTCCTCACTGGTGATAAAC +
Preference number: 4 (lower is better)
Translates to: SESVILFLIRVVGHCNTVRGLTS*SSLVIN
Trigger: GTTTATCACCAGTGAGGAGCAGGACGTGAGCCCCCG...AACAGTATTACAGTGTCCTACCACTCTAATCAAGAAAAGAATTACAGACTCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000502637.5
ENST00000506639.5
CDS-3UTR GCA 90 bp CTGGTTTTATGTAAAGACAATCCCGTCTTCTTTGTCAAAGACAGGTATAAGAAACGGGGGCTCACGTCCTaGTCCTCACTGGTGATAAAC +
Preference number: 4 (lower is better)
Translates to: LVLCKDNPVFFVKDRYKKRGLTS*SSLVIN
Trigger: GTTTATCACCAGTGAGGAGCAGGACGTGAGCCCCCG...TTTCTTATACCTGTCTTTGACAAAGAAGACGGGATTGTCTTTACATAAAACCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000506639.5
CDS-3UTR GCA 90 bp TTACTGGATACAGGCAACCCTAAAACTGACTGTCCCTCTGGACTCTACGTAGTGACAGTGTCCAATAGGTaGATACATCTCCTTAGTAAG +
Preference number: 4 (lower is better)
Translates to: LLDTGNPKTDCPSGLYVVTVSNR*IHLLSK
Trigger: CTTACTAAGGAGATGTATGCACCTATTGGACACTGT...CACTACGTAGAGTCCAGAGGGACAGTCAGTTTTAGGGTTGCCTGTATCCAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335606.11
ENST00000382072.6
CDS-3UTR GCA 90 bp TTACTGGATACAGGCAACCCTAAAACTGACTGTCCCTCTGGACTCTACGTAGTGATAAACCATACACACTaGATTTTGTGCTGCCTGTCT +
Preference number: 4 (lower is better)
Translates to: LLDTGNPKTDCPSGLYVVINHTH*ILCCLS
Trigger: AGACAGGCAGCACAAAATGCAGTGTGTATGGTTTAT...CACTACGTAGAGTCCAGAGGGACAGTCAGTTTTAGGGTTGCCTGTATCCAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335606.11
CDS-3UTR CCA 90 bp AAAATCAAGTACTATATGGACACCAACATGGAGCAGAAAATGAGGGCAGCAGTGCCAAGACAAAAGGCCTaGATGCAACCAATCACTCTG +
Preference number: 4 (lower is better)
Translates to: KIKYYMDTNMEQKMRAAVPRQKA*MQPITL
Trigger: CAGAGTGATTGGTTGCATCCAGGCCTTTTGTCTTGG...CACTGCTGCCCTCATTTTCTGCTCCATGTTGGTGTCCATATAGTACTTGATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335606.11
ENST00000382072.6
CDS-3UTR CCA 90 bp ACACCAAGACAAAAGGCCTGGATGCAACCAATCACTCTGTTTCACGTGACTTTTGCTCCAGGAGCAGGCTaGTTTTATGTAAAGACAATC +
Preference number: 4 (lower is better)
Translates to: TPRQKAWMQPITLFHVTFAPGAG*FYVKTI
Trigger: GATTGTCTTTACATAAAACCAGCCTGCTCCTGGAGC...AAAAGTCACGTGAAACAGAGTGATTGGTTGCATCCAGGCCTTTTGTCTTGGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000506639.5
CDS-3UTR CCA 90 bp TTCCTTGTTGTGATCATGATGAACAACCTCCTCAAAAGTCAGAACCGGAGTCACGCTCCAGGAGCAGGCTaGTTTTATGTAAAGACAATC +
Preference number: 4 (lower is better)
Translates to: FLVVIMMNNLLKSQNRSHAPGAG*FYVKTI
Trigger: GATTGTCTTTACATAAAACCAGCCTGCTCCTGGAGC...GTGACTCCGGTTCTGACTTTTGAGGAGGTTGTTCATCATGATCACAACAAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382072.6
ENST00000506639.5
CDS-3UTR TCA 90 bp ATTCTTTTCTTGATTAGAGTGGTAGGACACTGTAATACTGTTCCTCCATGTTTCTTGCTCCAACAGCCATaGATTCCCCATCTGCTGTCC +
Preference number: 4 (lower is better)
Translates to: ILFLIRVVGHCNTVPPCFLLQQP*IPHLLS
Trigger: GGACAGCAGATGGGGAATTCATGGCTGTTGGAGCAA...GAAACATGGAGGAACAGTATTACAGTGTCCTACCACTCTAATCAAGAAAAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000502637.5
ENST00000506639.5
CDS-3UTR TCA 90 bp ATTCTTTTCTTGATTAGAGTGGTAGGACACTGTAATACTGTTCCTCCATGTTTCGTGCCGTCAAAGATTTaGCACCACTCTGCCTTCGTC +
Preference number: 4 (lower is better)
Translates to: ILFLIRVVGHCNTVPPCFVPSKI*HHSAFV
Trigger: GACGAAGGCAGAGTGGTGTCAAATCTTTGACGGCAC...GAAACATGGAGGAACAGTATTACAGTGTCCTACCACTCTAATCAAGAAAAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000502637.5
ENST00000506639.5
CDS-3UTR TCA 90 bp TTATTGATGGCCTACCCAACATCCATTCTCTACTCCCTCTACTCTGATGGCACCTCACTCTGTTTCACGTaGCTTTTATCACCATACAAT +
Preference number: 4 (lower is better)
Translates to: LLMAYPTSILYSLYSDGTSLCFT*LLSPYN
Trigger: ATTGTATGGTGATAAAAGTCACGTGAAACAGAGTGA...GGTGCCATCAGAGTAGAGGGAGTAGAGAATGGATGTTGGGTAGGCCATCAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335606.11
ENST00000382072.6
CDS-3UTR TCA 90 bp ACACCAAGACAAAAGGCCTGGATGCAACCAATCACTCTGTTTCACGTGACTTTTACTAAGAAGCCCTTCTaGGTCTCTGTTTTCTCAACT +
Preference number: 4 (lower is better)
Translates to: TPRQKAWMQPITLFHVTFTKKPF*VSVFST
Trigger: AGTTGAGAAAACAGAGACTCAGAAGGGCTTCTTAGT...AAAAGTCACGTGAAACAGAGTGATTGGTTGCATCCAGGCCTTTTGTCTTGGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335606.11
ENST00000382072.6
CDS-3UTR TCA 90 bp TTCCTTGTTGTGATCATGATGAACAACCTCCTCAAAAGTCAGAACCGGAGTCACGGTATCAAAGATCTTTaGTCAGCAGCTCGTAGAACT +
Preference number: 4 (lower is better)
Translates to: FLVVIMMNNLLKSQNRSHGIKDL*SAARRT
Trigger: AGTTCTACGAGCTGCTGATCAAAGATCTTTGATACC...GTGACTCCGGTTCTGACTTTTGAGGAGGTTGTTCATCATGATCACAACAAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506639.5
CDS-3UTR GCA 90 bp TCAGAGTCTGTAATTCTTTTCTTGATTAGAGTGGTAGGACACTGTAATACTGTTCTTGGATTTTCCCGCTaGAGAATCTCTGGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: SESVILFLIRVVGHCNTVLGFSR*RISGPS
Trigger: GCTGGGCCCAGAGATTCTGCAGCGGGAAAATCCAAG...AACAGTATTACAGTGTCCTACCACTCTAATCAAGAAAAGAATTACAGACTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000502637.5
ENST00000506639.5
CDS-3UTR GCA 90 bp GGTATAAGAAAGGCTTGTAACTTAACTCAGTCCAAGGAGACACAAAACGACTTGTCACACAGGCATCTGTaGCGTCAAAGATTTGACACC +
Preference number: 4 (lower is better)
Translates to: GIRKACNLTQSKETQNDLSHRHL*RQRFDT
Trigger: GGTGTCAAATCTTTGACGGCACAGATGCCTGTGTGA...CAAGTCGTTTTGTGTCTCCTTGGACTGAGTTAAGTTACAAGCCTTTCTTATACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000506639.5
CDS-3UTR GCA 90 bp AAGTATCTCCTCAGTGTGTTCTCCTATGAAAGGATCCCTTTTGAAAGAAGGGATTTCCAGGTGAGAAGTTaGACAGTGTCCAATAGGTGC +
Preference number: 4 (lower is better)
Translates to: KYLLSVFSYERIPFERRDFQVRS*TVSNRC
Trigger: GCACCTATTGGACACTGTGCAACTTCTCACCTGGAA...ATCCCTTCTTTCAAAAGGGATCCTTTCATAGGAGAACACACTGAGGAGATACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382072.6
CDS-3UTR CCA 90 bp TCAGAGTCTGTAATTCTTTTCTTGATTAGAGTGGTAGGACACTGTAATACTGTTATCTCTGGGCCCAGCTaGAGTTTCTCCATGACACCG +
Preference number: 4 (lower is better)
Translates to: SESVILFLIRVVGHCNTVISGPS*SFSMTP
Trigger: CGGTGTCATGGAGAAACTCCAGCTGGGCCCAGAGAT...AACAGTATTACAGTGTCCTACCACTCTAATCAAGAAAAGAATTACAGACTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000502637.5
ENST00000506639.5
CDS-3UTR CCA 90 bp GCTCCAGGAGCAGGCTGGTTTTATGTAAAGACAATCCCGTCTTCTTTGTCAAAGACTGTTGCTAAAGTTTaGAATGTGCTTAGAGGGAGA +
Preference number: 4 (lower is better)
Translates to: APGAGWFYVKTIPSSLSKTVAKV*NVLRGR
Trigger: TCTCCCTCTAAGCACATTCCAAACTTTAGCAACAGT...CTTTGACAAAGAAGACGGGATTGTCTTTACATAAAACCAGCCTGCTCCTGGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000506639.5
CDS-3UTR CCA 90 bp GGTATAAGAAAGGCTTGTAACTTAACTCAGTCCAAGGAGACACAAAACGACTTGTGGGCTAGAGTGCAGTaGTGCAATCCTAATTCACTG +
Preference number: 4 (lower is better)
Translates to: GIRKACNLTQSKETQNDLWARVQ*CNPNSL
Trigger: CAGTGAATTAGGATTGCACCACTGCACTCTAGCCCA...CAAGTCGTTTTGTGTCTCCTTGGACTGAGTTAAGTTACAAGCCTTTCTTATACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335606.11
CDS-3UTR CCA 90 bp ATGGACACCAACATGGAGCAGAAAATGAGGGCAGCAGTGTCCAATCTCATTCCACAGATCTATTTCCTTTaGTGCTCTTTATCTTATGGG +
Preference number: 4 (lower is better)
Translates to: MDTNMEQKMRAAVSNLIPQIYFL*CSLSYG
Trigger: CCCATAAGATAAAGAGCACCAAAGGAAATAGATCTG...TGGAATGAGATTGGACACTGCTGCCCTCATTTTCTGCTCCATGTTGGTGTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335606.11
CDS-3UTR TCA 90 bp TCAGAGTCTGTAATTCTTTTCTTGATTAGAGTGGTAGGACACTGTAATACTGTTTTTGCATCAATGACCTaGCCCTTGCCAGTGCGTGTG +
Preference number: 4 (lower is better)
Translates to: SESVILFLIRVVGHCNTVFASMT*PLPVRV
Trigger: CACACGCACTGGCAAGGGTCAGGTCATTGATGCAAA...AACAGTATTACAGTGTCCTACCACTCTAATCAAGAAAAGAATTACAGACTCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335606.11
ENST00000502637.5
CDS-3UTR TCA 90 bp ATCATGATGAACAACCTCCTCAAAAGTCAGAACCGGAGTCACACAGGCATCTGTTCACTCTGTTTCACGTaGCTTTTATCACCATACAAT +
Preference number: 4 (lower is better)
Translates to: IMMNNLLKSQNRSHTGICSLCFT*LLSPYN
Trigger: ATTGTATGGTGATAAAAGTCACGTGAAACAGAGTGA...ACAGATGCCTGTGTGACTCCGGTTCTGACTTTTGAGGAGGTTGTTCATCATGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382072.6
ENST00000506639.5
CDS-3UTR TCA 90 bp TTCCTTGTTGTGATCATGATGAACAACCTCCTCAAAAGTCAGAACCGGAGTCACCAGTTGAAGGCATTCTaGTTCAATACAGGTGAAACT +
Preference number: 4 (lower is better)
Translates to: FLVVIMMNNLLKSQNRSHQLKAF*FNTGET
Trigger: AGTTTCACCTGTATTGAATCAGAATGCCTTCAACTG...GTGACTCCGGTTCTGACTTTTGAGGAGGTTGTTCATCATGATCACAACAAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382072.6
ENST00000506639.5
CDS-3UTR TCA 90 bp ACACCAAGACAAAAGGCCTGGATGCAACCAATCACTCTGTTTCACGTGACTTTTGTTGAAGAACAAGACTaGAGGCTAGAATATGAAAGC +
Preference number: 4 (lower is better)
Translates to: TPRQKAWMQPITLFHVTFVEEQD*RLEYES
Trigger: GCTTTCATATTCTAGCCTTCAGTCTTGTTCTTCAAC...AAAAGTCACGTGAAACAGAGTGATTGGTTGCATCCAGGCCTTTTGTCTTGGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335606.11
ENST00000382072.6
CDS-3UTR TCA 90 bp GGTATAAGAAAGGCTTGTAACTTAACTCAGTCCAAGGAGACACAAAACGACTTGTCCTGTGTTTGTCTTTaGTTTCCTCAAGAGCGGAGA +
Preference number: 4 (lower is better)
Translates to: GIRKACNLTQSKETQNDLSCVCL*FPQERR
Trigger: TCTCCGCTCTTGAGGAAATCAAAGACAAACACAGGA...CAAGTCGTTTTGTGTCTCCTTGGACTGAGTTAAGTTACAAGCCTTTCTTATACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335606.11
CDS-3UTR GCA 90 bp GGCTTCTCTGCTCTTTCGTCACCAGTGGAATTCTTTATATTAAATTTCCTCTGTCATTATAATGCCCAGTaGACACATAAGGCCACCACC +
Preference number: 4 (lower is better)
Translates to: GFSALSSPVEFFILNFLCHYNAQ*THKATT
Trigger: GGTGGTGGCCTTATGTGTGCACTGGGCATTATAATG...ACAGAGGAAATTTAATATAAAGAATTCCACTGGTGACGAAAGAGCAGAGAAGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335606.11
CDS-3UTR GCA 90 bp TGGATGCAACCAATCACTCTGTTTCACGTGACTTTTATCACCATACAATTTGTGTCACACAGGCATCTGTaGCGTCAAAGATTTGACACC +
Preference number: 4 (lower is better)
Translates to: WMQPITLFHVTFITIQFVSHRHL*RQRFDT
Trigger: GGTGTCAAATCTTTGACGGCACAGATGCCTGTGTGA...CACAAATTGTATGGTGATAAAAGTCACGTGAAACAGAGTGATTGGTTGCATCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000506639.5
CDS-3UTR GCA 90 bp TTCTCTGCAAATACATCTGCAAACTTCTTCTTCATTTCTGGCCAATCATCCATGTCACACAGGCATCTGTaGCGTCAAAGATTTGACACC +
Preference number: 4 (lower is better)
Translates to: FSANTSANFFFISGQSSMSHRHL*RQRFDT
Trigger: GGTGTCAAATCTTTGACGGCACAGATGCCTGTGTGA...CATGGATGATTGGCCAGAAATGAAGAAGAAGTTTGCAGATGTATTTGCAGAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382072.6
ENST00000506639.5
CDS-3UTR GCA 90 bp TTAGAGGGAGATCATGAACACCAAGACAAAAGGCCTGGATGCAACCAATCACTCATCTATTTCCTTTGGTaGTCTTTATCTTATGGGGCT +
Preference number: 4 (lower is better)
Translates to: LEGDHEHQDKRPGCNQSLIYFLW*SLSYGA
Trigger: AGCCCCATAAGATAAAGAGCACCAAAGGAAATAGAT...GAGTGATTGGTTGCATCCAGGCCTTTTGTCTTGGTGTTCATGATCTCCCTCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335606.11
CDS-3UTR CCA 90 bp CTGGTTTTATGTAAAGACAATCCCGTCTTCTTTGTCAAAGACAGGTATAAGAAACAGAAGCTTCCTGACTaGCCAAATCCACTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: LVLCKDNPVFFVKDRYKKQKLPD*PNPLSL
Trigger: CAGGCTGAGTGGATTTGGCCAGTCAGGAAGCTTCTG...TTTCTTATACCTGTCTTTGACAAAGAAGACGGGATTGTCTTTACATAAAACCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000506639.5
CDS-3UTR CCA 90 bp TCAGAGTCTGTAATTCTTTTCTTGATTAGAGTGGTAGGACACTGTAATACTGTTCAGAAGCTTCCTGACTaGCCAAATCCACTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: SESVILFLIRVVGHCNTVQKLPD*PNPLSL
Trigger: CAGGCTGAGTGGATTTGGCCAGTCAGGAAGCTTCTG...AACAGTATTACAGTGTCCTACCACTCTAATCAAGAAAAGAATTACAGACTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000502637.5
ENST00000506639.5
CDS-3UTR CCA 90 bp ATTCTTTTCTTGATTAGAGTGGTAGGACACTGTAATACTGTTCCTCCATGTTTCCTTGAGCCGTGGGCCTaGAAGTTAGAGACTAGCTTT +
Preference number: 4 (lower is better)
Translates to: ILFLIRVVGHCNTVPPCFLEPWA*KLETSF
Trigger: AAAGCTAGTCTCTAACTTCCAGGCCCACGGCTCAAG...GAAACATGGAGGAACAGTATTACAGTGTCCTACCACTCTAATCAAGAAAAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000502637.5
ENST00000506639.5
CDS-3UTR TCA 90 bp TTCTCTGCAAATACATCTGCAAACTTCTTCTTCATTTCTGGCCAATCATCCATGTCATCCATGCTCATCTaGTTGGGAAGTTCATCAGAC +
Preference number: 4 (lower is better)
Translates to: FSANTSANFFFISGQSSMSSMLI*LGSSSD
Trigger: GTCTGATGAACTTCCCAATCAGATGAGCATGGATGA...CATGGATGATTGGCCAGAAATGAAGAAGAAGTTTGCAGATGTATTTGCAGAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382072.6
ENST00000506639.5
CDS-3UTR TCA 90 bp ATTCTTTTCTTGATTAGAGTGGTAGGACACTGTAATACTGTTCCTCCATGTTTCGTATTCAAATTCACTTaGGCCGTGGGCCTGGAAGTT +
Preference number: 4 (lower is better)
Translates to: ILFLIRVVGHCNTVPPCFVFKFT*AVGLEV
Trigger: AACTTCCAGGCCCACGGCTCAAGTGAATTTGAATAC...GAAACATGGAGGAACAGTATTACAGTGTCCTACCACTCTAATCAAGAAAAGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000502637.5
ENST00000506639.5
CDS-3UTR TCA 90 bp ATTCTTTTCTTGATTAGAGTGGTAGGACACTGTAATACTGTTCCTCCATGTTTCCAATCTCATTCCAGGTaGGAAGTTGCACAGTGTCCA +
Preference number: 4 (lower is better)
Translates to: ILFLIRVVGHCNTVPPCFQSHSR*EVAQCP
Trigger: TGGACACTGTGCAACTTCTCACCTGGAATGAGATTG...GAAACATGGAGGAACAGTATTACAGTGTCCTACCACTCTAATCAAGAAAAGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335606.11
ENST00000382072.6
CDS-3UTR TCA 90 bp ATTCTTTTCTTGATTAGAGTGGTAGGACACTGTAATACTGTTCCTCCATGTTTCTCATATTTGCATCAATaGCCTGACCCTTGCCAGTGC +
Preference number: 4 (lower is better)
Translates to: ILFLIRVVGHCNTVPPCFSYLHQ*PDPCQC
Trigger: GCACTGGCAAGGGTCAGGTCATTGATGCAAATATGA...GAAACATGGAGGAACAGTATTACAGTGTCCTACCACTCTAATCAAGAAAAGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502637.5
CDS-3UTR GCA 90 bp ATTCTTTTCTTGATTAGAGTGGTAGGACACTGTAATACTGTTCCTCCATGTTTCCATTATAATGCCCAGTaGACACATAAGGCCACCACC +
Preference number: 4 (lower is better)
Translates to: ILFLIRVVGHCNTVPPCFHYNAQ*THKATT
Trigger: GGTGGTGGCCTTATGTGTGCACTGGGCATTATAATG...GAAACATGGAGGAACAGTATTACAGTGTCCTACCACTCTAATCAAGAAAAGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335606.11
ENST00000502637.5
CDS-3UTR GCA 90 bp TCAGAGTCTGTAATTCTTTTCTTGATTAGAGTGGTAGGACACTGTAATACTGTTCCTTGCCAGTGCGTGTaGGGTCAAAAAGAGCCATTA +
Preference number: 4 (lower is better)
Translates to: SESVILFLIRVVGHCNTVPCQCV*GQKEPL
Trigger: TAATGGCTCTTTTTGACCGCACACGCACTGGCAAGG...AACAGTATTACAGTGTCCTACCACTCTAATCAAGAAAAGAATTACAGACTCTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335606.11
ENST00000502637.5
CDS-3UTR GCA 90 bp ATTCTTTTCTTGATTAGAGTGGTAGGACACTGTAATACTGTTCCTCCATGTTTCGTTCTGTCCTCGAGGTaGTTCCCACAGACTCAATTT +
Preference number: 4 (lower is better)
Translates to: ILFLIRVVGHCNTVPPCFVLSSR*FPQTQF
Trigger: AAATTGAGTCTGTGGGAAGCACCTCGAGGACAGAAC...GAAACATGGAGGAACAGTATTACAGTGTCCTACCACTCTAATCAAGAAAAGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000502637.5
ENST00000506639.5
CDS-3UTR GCA 90 bp TGGATGCAACCAATCACTCTGTTTCACGTGACTTTTATCACCATACAATTTGTGGAACTGGGGTTCTATTaGTCCAACAGCCATGAATTC +
Preference number: 4 (lower is better)
Translates to: WMQPITLFHVTFITIQFVELGFY*SNSHEF
Trigger: GAATTCATGGCTGTTGGAGCAATAGAACCCCAGTTC...CACAAATTGTATGGTGATAAAAGTCACGTGAAACAGAGTGATTGGTTGCATCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000506639.5
CDS-3UTR GCA 90 bp AAAATCAAGTACTATATGGACACCAACATGGAGCAGAAAATGAGGGCAGCAGTGTGCCTTCGTCTTCTCTaGAAATACATCTGCAAACTT +
Preference number: 4 (lower is better)
Translates to: KIKYYMDTNMEQKMRAAVCLRLL*KYICKL
Trigger: AAGTTTGCAGATGTATTTGCAGAGAAGACGAAGGCA...CACTGCTGCCCTCATTTTCTGCTCCATGTTGGTGTCCATATAGTACTTGATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335606.11
ENST00000382072.6
CDS-3UTR GCA 90 bp ATTCTTTTCTTGATTAGAGTGGTAGGACACTGTAATACTGTTCCTCCATGTTTCTCACACAGGCATCTGTaGCGTCAAAGATTTGACACC +
Preference number: 4 (lower is better)
Translates to: ILFLIRVVGHCNTVPPCFSHRHL*RQRFDT
Trigger: GGTGTCAAATCTTTGACGGCACAGATGCCTGTGTGA...GAAACATGGAGGAACAGTATTACAGTGTCCTACCACTCTAATCAAGAAAAGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000502637.5
ENST00000506639.5
CDS-3UTR GCA 90 bp GGTATAAGAAAGGCTTGTAACTTAACTCAGTCCAAGGAGACACAAAACGACTTGATAAGATCCAGAACTTaGTACCAGCCTGAGGAGAAA +
Preference number: 4 (lower is better)
Translates to: GIRKACNLTQSKETQNDLIRSRT*YQPEEK
Trigger: TTTCTCCTCAGGCTGGTAGCAAGTTCTGGATCTTAT...CAAGTCGTTTTGTGTCTCCTTGGACTGAGTTAAGTTACAAGCCTTTCTTATACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000506639.5
CDS-3UTR GCA 90 bp GGTATAAGAAAGGCTTGTAACTTAACTCAGTCCAAGGAGACACAAAACGACTTGCTGCCCCTTCCTAGTTaGATATTCCTGAGCAAATAT +
Preference number: 4 (lower is better)
Translates to: GIRKACNLTQSKETQNDLLPLPS*IFLSKY
Trigger: ATATTTGCTCAGGAATATGCAACTAGGAAGGGGCAG...CAAGTCGTTTTGTGTCTCCTTGGACTGAGTTAAGTTACAAGCCTTTCTTATACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335606.11
ENST00000382072.6
CDS-3UTR CCA 90 bp TGGATGCAACCAATCACTCTGTTTCACGTGACTTTTATCACCATACAATTTGTGAATCCTAATTCACTGTaGCCTCAAATTCCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: WMQPITLFHVTFITIQFVNPNSL*PQIPGL
Trigger: GAGCCCAGGAATTTGAGGCCACAGTGAATTAGGATT...CACAAATTGTATGGTGATAAAAGTCACGTGAAACAGAGTGATTGGTTGCATCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335606.11
CDS-3UTR TCA 90 bp AAGTATCTCCTCAGTGTGTTCTCCTATGAAAGGATCCCTTTTGAAAGAAGGGATAAATCTCTTCGCGGCTaGATCCAAATTCTTCAAGTA +
Preference number: 4 (lower is better)
Translates to: KYLLSVFSYERIPFERRDKSLRG*IQILQV
Trigger: TACTTGAAGAATTTGGATTCAGCCGCGAAGAGATTT...ATCCCTTCTTTCAAAAGGGATCCTTTCATAGGAGAACACACTGAGGAGATACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382072.6
ENST00000506639.5
CDS-3UTR TCA 90 bp GGTATAAGAAAGGCTTGTAACTTAACTCAGTCCAAGGAGACACAAAACGACTTGAATTTCATATTTTTGTaGGACTGGGTTTTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: GIRKACNLTQSKETQNDLNFIFL*DWVFQA
Trigger: GGCCTGGAAAACCCAGTCTCACAAAAATATGAAATT...CAAGTCGTTTTGTGTCTCCTTGGACTGAGTTAAGTTACAAGCCTTTCTTATACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335606.11
ENST00000382072.6
CDS-3UTR GCA 90 bp TGGATGCAACCAATCACTCTGTTTCACGTGACTTTTATCACCATACAATTTGTGAGTCGTATAGAAAGGTaGTCCACCATCCAACATGTT +
Preference number: 4 (lower is better)
Translates to: WMQPITLFHVTFITIQFVSRIER*STIQHV
Trigger: AACATGTTGGATGGTGGAGCACCTTTCTATACGACT...CACAAATTGTATGGTGATAAAAGTCACGTGAAACAGAGTGATTGGTTGCATCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000506639.5
CDS-3UTR GCA 90 bp ATTCTTTTCTTGATTAGAGTGGTAGGACACTGTAATACTGTTCCTCCATGTTTCGAACTGGGGTTCTATTaGTCCAACAGCCATGAATTC +
Preference number: 4 (lower is better)
Translates to: ILFLIRVVGHCNTVPPCFELGFY*SNSHEF
Trigger: GAATTCATGGCTGTTGGAGCAATAGAACCCCAGTTC...GAAACATGGAGGAACAGTATTACAGTGTCCTACCACTCTAATCAAGAAAAGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000502637.5
ENST00000506639.5
CDS-3UTR GCA 90 bp ATTCTTTTCTTGATTAGAGTGGTAGGACACTGTAATACTGTTCCTCCATGTTTCCTGGCCAATCATCCATaGTCATCTGATTGGGAAGTT +
Preference number: 4 (lower is better)
Translates to: ILFLIRVVGHCNTVPPCFLANHP*SSDWEV
Trigger: AACTTCCCAATCAGATGAGCATGGATGATTGGCCAG...GAAACATGGAGGAACAGTATTACAGTGTCCTACCACTCTAATCAAGAAAAGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000502637.5
ENST00000506639.5
CDS-3UTR GCA 90 bp TTCTCTGCAAATACATCTGCAAACTTCTTCTTCATTTCTGGCCAATCATCCATGATAAGATCCAGAACTTaGTACCAGCCTGAGGAGAAA +
Preference number: 4 (lower is better)
Translates to: FSANTSANFFFISGQSSMIRSRT*YQPEEK
Trigger: TTTCTCCTCAGGCTGGTAGCAAGTTCTGGATCTTAT...CATGGATGATTGGCCAGAAATGAAGAAGAAGTTTGCAGATGTATTTGCAGAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382072.6
ENST00000506639.5
CDS-3UTR GCA 90 bp TCAGAGTCTGTAATTCTTTTCTTGATTAGAGTGGTAGGACACTGTAATACTGTTTTCCAGGTGAGAAGTTaGACAGTGTCCAATAGGTGC +
Preference number: 4 (lower is better)
Translates to: SESVILFLIRVVGHCNTVFQVRS*TVSNRC
Trigger: GCACCTATTGGACACTGTGCAACTTCTCACCTGGAA...AACAGTATTACAGTGTCCTACCACTCTAATCAAGAAAAGAATTACAGACTCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335606.11
ENST00000382072.6
CDS-3UTR CCA 90 bp TCAGAGTCTGTAATTCTTTTCTTGATTAGAGTGGTAGGACACTGTAATACTGTTAATTCACTTGAGCCGTaGGCCTGGAAGTTAGAGACT +
Preference number: 4 (lower is better)
Translates to: SESVILFLIRVVGHCNTVNSLEP*AWKLET
Trigger: AGTCTCTAACTTCCAGGCCCACGGCTCAAGTGAATT...AACAGTATTACAGTGTCCTACCACTCTAATCAAGAAAAGAATTACAGACTCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000502637.5
ENST00000506639.5
CDS-3UTR CCA 90 bp AAAATCAAGTACTATATGGACACCAACATGGAGCAGAAAATGAGGGCAGCAGTGCTGTTTTGTTCATTATaGTATCCCCAGCAAGTATCA +
Preference number: 4 (lower is better)
Translates to: KIKYYMDTNMEQKMRAAVLFCSL*YPQQVS
Trigger: TGATACTTGCTGGGGATACCATAATGAACAAAACAG...CACTGCTGCCCTCATTTTCTGCTCCATGTTGGTGTCCATATAGTACTTGATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000335606.11
CDS-3UTR TCA 90 bp TCAGAGTCTGTAATTCTTTTCTTGATTAGAGTGGTAGGACACTGTAATACTGTTTTAGTCCAAGTCCTTTaGTCAGCAGCTCGTAGAACT +
Preference number: 4 (lower is better)
Translates to: SESVILFLIRVVGHCNTVLVQVL*SAARRT
Trigger: AGTTCTACGAGCTGCTGATCAAAGGACTTGGACTAA...AACAGTATTACAGTGTCCTACCACTCTAATCAAGAAAAGAATTACAGACTCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000502637.5
CDS-3UTR TCA 90 bp TCAGAGTCTGTAATTCTTTTCTTGATTAGAGTGGTAGGACACTGTAATACTGTTTCATCCATGCTCATCTaGTTGGGAAGTTCATCAGAC +
Preference number: 4 (lower is better)
Translates to: SESVILFLIRVVGHCNTVSSMLI*LGSSSD
Trigger: GTCTGATGAACTTCCCAATCAGATGAGCATGGATGA...AACAGTATTACAGTGTCCTACCACTCTAATCAAGAAAAGAATTACAGACTCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000502637.5
ENST00000506639.5
CDS-3UTR TCA 90 bp GGTATAAGAAAGGCTTGTAACTTAACTCAGTCCAAGGAGACACAAAACGACTTGCTAGTTGCATATTCCTaGGCAAATATTTTCAACTGG +
Preference number: 4 (lower is better)
Translates to: GIRKACNLTQSKETQNDLLVAYS*ANIFNW
Trigger: CCAGTTGAAAATATTTGCTCAGGAATATGCAACTAG...CAAGTCGTTTTGTGTCTCCTTGGACTGAGTTAAGTTACAAGCCTTTCTTATACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335606.11
ENST00000382072.6
CDS-3UTR TCA 90 bp GCAACCAATCACTCTGTTTCACGTGACTTTTATCACCATACAATTTGTGGCATTGTTGAAGAACAAGACTaGAGGCTAGAATATGAAAGC +
Preference number: 4 (lower is better)
Translates to: ATNHSVSRDFYHHTICGIVEEQD*RLEYES
Trigger: GCTTTCATATTCTAGCCTTCAGTCTTGTTCTTCAAC...AATGCCACAAATTGTATGGTGATAAAAGTCACGTGAAACAGAGTGATTGGTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335606.11
ENST00000382072.6
CDS-3UTR GCA 90 bp ATTCTTTTCTTGATTAGAGTGGTAGGACACTGTAATACTGTTCCTCCATGTTTCAGTCGTATAGAAAGGTaGTCCACCATCCAACATGTT +
Preference number: 4 (lower is better)
Translates to: ILFLIRVVGHCNTVPPCFSRIER*STIQHV
Trigger: AACATGTTGGATGGTGGAGCACCTTTCTATACGACT...GAAACATGGAGGAACAGTATTACAGTGTCCTACCACTCTAATCAAGAAAAGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000502637.5
ENST00000506639.5
CDS-3UTR GCA 90 bp CTGGTTTTATGTAAAGACAATCCCGTCTTCTTTGTCAAAGACAGGTATAAGAAAGAACTGGGGTTCTATTaGTCCAACAGCCATGAATTC +
Preference number: 4 (lower is better)
Translates to: LVLCKDNPVFFVKDRYKKELGFY*SNSHEF
Trigger: GAATTCATGGCTGTTGGAGCAATAGAACCCCAGTTC...TTTCTTATACCTGTCTTTGACAAAGAAGACGGGATTGTCTTTACATAAAACCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000506639.5
CDS-3UTR GCA 90 bp CTGGTTTTATGTAAAGACAATCCCGTCTTCTTTGTCAAAGACAGGTATAAGAAACTGGCCAATCATCCATaGTCATCTGATTGGGAAGTT +
Preference number: 4 (lower is better)
Translates to: LVLCKDNPVFFVKDRYKKLANHP*SSDWEV
Trigger: AACTTCCCAATCAGATGAGCATGGATGATTGGCCAG...TTTCTTATACCTGTCTTTGACAAAGAAGACGGGATTGTCTTTACATAAAACCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000506639.5
CDS-3UTR GCA 90 bp GCAACCAATCACTCTGTTTCACGTGACTTTTATCACCATACAATTTGTGGCATTTGCCTTCGTCTTCTCTaGAAATACATCTGCAAACTT +
Preference number: 4 (lower is better)
Translates to: ATNHSVSRDFYHHTICGICLRLL*KYICKL
Trigger: AAGTTTGCAGATGTATTTGCAGAGAAGACGAAGGCA...AATGCCACAAATTGTATGGTGATAAAAGTCACGTGAAACAGAGTGATTGGTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000506639.5
CDS-3UTR GCA 90 bp TCAGAGTCTGTAATTCTTTTCTTGATTAGAGTGGTAGGACACTGTAATACTGTTGATTTGACACCACTCTaGCTTCGTCTTCTCTGCAAA +
Preference number: 4 (lower is better)
Translates to: SESVILFLIRVVGHCNTVDLTPL*LRLLCK
Trigger: TTTGCAGAGAAGACGAAGGCAGAGTGGTGTCAAATC...AACAGTATTACAGTGTCCTACCACTCTAATCAAGAAAAGAATTACAGACTCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000502637.5
ENST00000506639.5
CDS-3UTR CCA 90 bp TTCTCTGCAAATACATCTGCAAACTTCTTCTTCATTTCTGGCCAATCATCCATGCCATGCTCATCTGATTaGGAAGTTCATCAGACTTTA +
Preference number: 4 (lower is better)
Translates to: FSANTSANFFFISGQSSMPCSSD*EVHQTL
Trigger: TAAAGTCTGATGAACTTCCCAATCAGATGAGCATGG...CATGGATGATTGGCCAGAAATGAAGAAGAAGTTTGCAGATGTATTTGCAGAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382072.6
ENST00000506639.5
3UTR CAA 72 bp GCAGGCTGGTTTTATGTAAAGACAATCCCGTCTTCTTaGTCAAAGACAGGTATAAGAAAGGCTTGTAACTTA +
Preference number: 4 (lower is better)
Translates to: AGWFYVKTIPSS*SKTGIRKACNL
Trigger: TAAGTTACAAGCCTTTCTTATACCTGTCTTTGACAAAGAAGACGGGATTGTCTTTACATAAAACCAGCCTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000506639.5
CDS-3UTR TCA 90 bp GCAACCAATCACTCTGTTTCACGTGACTTTTATCACCATACAATTTGTGGCATTCTAGTTGCATATTCCTaGGCAAATATTTTCAACTGG +
Preference number: 4 (lower is better)
Translates to: ATNHSVSRDFYHHTICGILVAYS*ANIFNW
Trigger: CCAGTTGAAAATATTTGCTCAGGAATATGCAACTAG...AATGCCACAAATTGTATGGTGATAAAAGTCACGTGAAACAGAGTGATTGGTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335606.11
ENST00000382072.6
CDS-3UTR GCA 90 bp TCAGAGTCTGTAATTCTTTTCTTGATTAGAGTGGTAGGACACTGTAATACTGTTCATGAATTCCCCATCTaGTGTCCTGTAAGTCGTATA +
Preference number: 4 (lower is better)
Translates to: SESVILFLIRVVGHCNTVHEFPI*CPVSRI
Trigger: TATACGACTTACAGGACAGCAGATGGGGAATTCATG...AACAGTATTACAGTGTCCTACCACTCTAATCAAGAAAAGAATTACAGACTCTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000502637.5
ENST00000506639.5
CDS-3UTR GCA 90 bp ATTCTTTTCTTGATTAGAGTGGTAGGACACTGTAATACTGTTCCTCCATGTTTCACAGTGTCCAATAGGTaGATACATCTCCTTAGTAAG +
Preference number: 4 (lower is better)
Translates to: ILFLIRVVGHCNTVPPCFTVSNR*IHLLSK
Trigger: CTTACTAAGGAGATGTATGCACCTATTGGACACTGT...GAAACATGGAGGAACAGTATTACAGTGTCCTACCACTCTAATCAAGAAAAGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335606.11
ENST00000382072.6
CDS-3UTR CCA 90 bp ATTCTTTTCTTGATTAGAGTGGTAGGACACTGTAATACTGTTCCTCCATGTTTCCCATGCTCATCTGATTaGGAAGTTCATCAGACTTTA +
Preference number: 4 (lower is better)
Translates to: ILFLIRVVGHCNTVPPCFPCSSD*EVHQTL
Trigger: TAAAGTCTGATGAACTTCCCAATCAGATGAGCATGG...GAAACATGGAGGAACAGTATTACAGTGTCCTACCACTCTAATCAAGAAAAGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000502637.5
ENST00000506639.5
CDS-3UTR CCA 90 bp TGGATGCAACCAATCACTCTGTTTCACGTGACTTTTATCACCATACAATTTGTGAAATCAAGTACTATATaGACACCAACATGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: WMQPITLFHVTFITIQFVKSSTI*TPTWSR
Trigger: TCTGCTCCATGTTGGTGTCCATATAGTACTTGATTT...CACAAATTGTATGGTGATAAAAGTCACGTGAAACAGAGTGATTGGTTGCATCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335606.11
ENST00000382072.6
CDS-3UTR TCA 90 bp TCAGAGTCTGTAATTCTTTTCTTGATTAGAGTGGTAGGACACTGTAATACTGTTAAATCTCTTCGCGGCTaGATCCAAATTCTTCAAGTA +
Preference number: 4 (lower is better)
Translates to: SESVILFLIRVVGHCNTVKSLRG*IQILQV
Trigger: TACTTGAAGAATTTGGATTCAGCCGCGAAGAGATTT...AACAGTATTACAGTGTCCTACCACTCTAATCAAGAAAAGAATTACAGACTCTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000502637.5
ENST00000506639.5
CDS-3UTR GCA 90 bp TCAGAGTCTGTAATTCTTTTCTTGATTAGAGTGGTAGGACACTGTAATACTGTTTGCCTTCGTCTTCTCTaGAAATACATCTGCAAACTT +
Preference number: 4 (lower is better)
Translates to: SESVILFLIRVVGHCNTVCLRLL*KYICKL
Trigger: AAGTTTGCAGATGTATTTGCAGAGAAGACGAAGGCA...AACAGTATTACAGTGTCCTACCACTCTAATCAAGAAAAGAATTACAGACTCTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000502637.5
ENST00000506639.5
CDS-3UTR GCA 90 bp TGGATGCAACCAATCACTCTGTTTCACGTGACTTTTATCACCATACAATTTGTGTCCTCCATGTTTCCATaGATACAATGTTATGTGTTA +
Preference number: 4 (lower is better)
Translates to: WMQPITLFHVTFITIQFVSSMFP*IQCYVL
Trigger: TAACACATAACATTGTATGCATGGAAACATGGAGGA...CACAAATTGTATGGTGATAAAAGTCACGTGAAACAGAGTGATTGGTTGCATCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000506639.5
CDS-3UTR GCA 90 bp ATTCTTTTCTTGATTAGAGTGGTAGGACACTGTAATACTGTTCCTCCATGTTTCCTAAAGTTTGGAATGTaGTTAGAGGGAGATCATGAA +
Preference number: 4 (lower is better)
Translates to: ILFLIRVVGHCNTVPPCFLKFGM*LEGDHE
Trigger: TTCATGATCTCCCTCTAAGCACATTCCAAACTTTAG...GAAACATGGAGGAACAGTATTACAGTGTCCTACCACTCTAATCAAGAAAAGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000506639.5
CDS-3UTR CCA 90 bp TCAGAGTCTGTAATTCTTTTCTTGATTAGAGTGGTAGGACACTGTAATACTGTTACTGTTGCTAAAGTTTaGAATGTGCTTAGAGGGAGA +
Preference number: 4 (lower is better)
Translates to: SESVILFLIRVVGHCNTVTVAKV*NVLRGR
Trigger: TCTCCCTCTAAGCACATTCCAAACTTTAGCAACAGT...AACAGTATTACAGTGTCCTACCACTCTAATCAAGAAAAGAATTACAGACTCTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000506639.5
CDS-3UTR TCA 90 bp CTGGTTTTATGTAAAGACAATCCCGTCTTCTTTGTCAAAGACAGGTATAAGAAAAACACACAAACACAATaGAACTCAACATCTGTCAGA +
Preference number: 4 (lower is better)
Translates to: LVLCKDNPVFFVKDRYKKNTQTQ*NSTSVR
Trigger: TCTGACAGATGTTGAGTTTCATTGTGTTTGTGTGTT...TTTCTTATACCTGTCTTTGACAAAGAAGACGGGATTGTCTTTACATAAAACCAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335606.11
ENST00000382072.6
CDS-3UTR GCA 90 bp ATTCTTTTCTTGATTAGAGTGGTAGGACACTGTAATACTGTTCCTCCATGTTTCTCCTCCATGTTTCCATaGATACAATGTTATGTGTTA +
Preference number: 4 (lower is better)
Translates to: ILFLIRVVGHCNTVPPCFSSMFP*IQCYVL
Trigger: TAACACATAACATTGTATGCATGGAAACATGGAGGA...GAAACATGGAGGAACAGTATTACAGTGTCCTACCACTCTAATCAAGAAAAGAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000502637.5
ENST00000506639.5
CDS-3UTR GCA 90 bp ATTCTTTTCTTGATTAGAGTGGTAGGACACTGTAATACTGTTCCTCCATGTTTCACTCAATTTCATATTTaGATCAATGACCTGACCCTT +
Preference number: 4 (lower is better)
Translates to: ILFLIRVVGHCNTVPPCFTQFHI*INDLTL
Trigger: AAGGGTCAGGTCATTGATGCAAATATGAAATTGAGT...GAAACATGGAGGAACAGTATTACAGTGTCCTACCACTCTAATCAAGAAAAGAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502637.5
CDS-3UTR CCA 90 bp TCAGAGTCTGTAATTCTTTTCTTGATTAGAGTGGTAGGACACTGTAATACTGTTAAATCAAGTACTATATaGACACCAACATGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: SESVILFLIRVVGHCNTVKSSTI*TPTWSR
Trigger: TCTGCTCCATGTTGGTGTCCATATAGTACTTGATTT...AACAGTATTACAGTGTCCTACCACTCTAATCAAGAAAAGAATTACAGACTCTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335606.11
ENST00000382072.6
CDS-3UTR GCA 90 bp TCAGAGTCTGTAATTCTTTTCTTGATTAGAGTGGTAGGACACTGTAATACTGTTTCCTCCATGTTTCCATaGATACAATGTTATGTGTTA +
Preference number: 4 (lower is better)
Translates to: SESVILFLIRVVGHCNTVSSMFP*IQCYVL
Trigger: TAACACATAACATTGTATGCATGGAAACATGGAGGA...AACAGTATTACAGTGTCCTACCACTCTAATCAAGAAAAGAATTACAGACTCTGA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000502637.5
ENST00000506639.5
CDS GCA 90 bp CGGCGGCTCCCCGCGGCTGCTTCAGGTCCAGCACTAGCGAGCGCTTaGCCCGGCCCAAGCGGCTCACGTCGTAGCGGGAGCCGGGCCGGT +
Preference number: 5 (lower is better)
Translates to: RRLPAAASGPALASA*PGPSGSRRSGSRAG
Trigger: ACCGGCCCGGCTCCCGCTACGACGTGAGCCGCTTGGGCCGGGGCAAGCGCTCGCTAGTGCTGGACCTGAAGCAGCCGCGGGGAGCCGCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000335606.11
ENST00000382068.3
ENST00000382072.6
ENST00000382085.7
ENST00000426255.6
ENST00000502637.5
ENST00000506639.5
ENST00000512079.5
ENST00000514195.1
CDS GCA 90 bp TCCGACCGCTTGCACAGACGCCGCAGCACGGCGGCTCCCCGCGGCTaGTTCAGGTCCAGCACTAGCGAGCGCTTGCCCCGGCCCAAGCGG +
Preference number: 5 (lower is better)
Translates to: SDRLHRRRSTAAPRG*FRSSTSERLPRPKR
Trigger: CCGCTTGGGCCGGGGCAAGCGCTCGCTAGTGCTGGACCTGAAGCAGCCGCGGGGAGCCGCCGTGCTGCGGCGTCTGTGCAAGCGGTCGGA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000335606.11
ENST00000382068.3
ENST00000382072.6
ENST00000382085.7
ENST00000426255.6
ENST00000502637.5
ENST00000506639.5
ENST00000512079.5
ENST00000514195.1
CDS GCA 90 bp AACGGGCCCGGGGCCAGGCCGGACAGCTCCACGACCGAGATGCCCTaGAGTGCCATGGCGCTTCCCAGTGCCCCGCTGAAGGAAACTGAG +
Preference number: 5 (lower is better)
Translates to: NGPGARPDSSTTEMP*SAMALPSAPLKETE
Trigger: CTCAGTTTCCTTCAGCGGGGCACTGGGAAGCGCCATGGCACTGCAGGGCATCTCGGTCGTGGAGCTGTCCGGCCTGGCCCCGGGCCCGTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426255.6
ENST00000502637.5
CDS-3UTR CAA 90 bp AAGCTGACAGCCCAGAGACCCACGGGGAAACAGGCCCCGAGTTACTGGATACAGAGCACTAGCGAGCGCTaGCCCCGGCCCAAGCGGCTC +
Preference number: 5 (lower is better)
Translates to: KLTAQRPTGKQAPSYWIQSTSER*PRPKRL
Trigger: GAGCCGCTTGGGCCGGGGCAAGCGCTCGCTAGTGCT...CTGTATCCAGTAACTCGGGGCCTGTTTCCCCGTGGGTCTCTGGGCTGTCAGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000506639.5
CDS-3UTR CAA 90 bp TCCAAGTACACCAGCTTTCCCATCACCCCTGCAACCATAGGAGTGGTCTTGGCTAGCACTAGCGAGCGCTaGCCCCGGCCCAAGCGGCTC +
Preference number: 5 (lower is better)
Translates to: SKYTSFPITPATIGVVLASTSER*PRPKRL
Trigger: GAGCCGCTTGGGCCGGGGCAAGCGCTCGCTAGTGCT...AGCCAAGACCACTCCTATGGTTGCAGGGGTGATGGGAAAGCTGGTGTACTTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335606.11
CDS-3UTR CAA 90 bp TGCAGGGCGGGGGCTCACGTCCTGCTCCTCACTGGTGATAAACGAGCCCCGTTCTGTGCCGTCAAAGATTaGACACCACTCTGCCTTCGT +
Preference number: 5 (lower is better)
Translates to: CRAGAHVLLLTGDKRAPFCAVKD*TPLCLR
Trigger: ACGAAGGCAGAGTGGTGTCAAATCTTTGACGGCACA...GAACGGGGCTCGTTTATCACCAGTGAGGAGCAGGACGTGAGCCCCCGCCCTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382072.6
ENST00000506639.5
CDS CCA 90 bp CAGCCTGGCATAAATAAGCCTTGGATTTTCCCGCTGCAGAATCTCTaGGCCCAGCTGGAGTTTCTCCATGACACCGCGGCGGAAGGGCTC +
Preference number: 5 (lower is better)
Translates to: QPGINKPWIFPLQNL*AQLEFLHDTAAEGL
Trigger: GAGCCCTTCCGCCGCGGTGTCATGGAGAAACTCCAGCTGGGCCCAGAGATTCTGCAGCGGGAAAATCCAAGGCTTATTTATGCCAGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000335606.11
ENST00000382068.3
ENST00000382072.6
ENST00000382085.7
ENST00000426255.6
ENST00000502637.5
ENST00000506639.5
ENST00000512079.5
ENST00000514195.1
CDS-3UTR CAA 90 bp GCTCCAGGAGCAGGCTGGTTTTATGTAAAGACAATCCCGTCTTCTTTGTCAAAGAGCACTAGCGAGCGCTaGCCCCGGCCCAAGCGGCTC +
Preference number: 5 (lower is better)
Translates to: APGAGWFYVKTIPSSLSKSTSER*PRPKRL
Trigger: GAGCCGCTTGGGCCGGGGCAAGCGCTCGCTAGTGCT...CTTTGACAAAGAAGACGGGATTGTCTTTACATAAAACCAGCCTGCTCCTGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000506639.5
CDS-3UTR CAA 90 bp TGCAGGGCGGGGGCTCACGTCCTGCTCCTCACTGGTGATAAACGAGCCCCGTTCGGATGTTGCTGTGTGTaGGGTATAAGATCCAGAACT +
Preference number: 5 (lower is better)
Translates to: CRAGAHVLLLTGDKRAPFGCCCV*GIRSRT
Trigger: AGTTCTGGATCTTATACCCAACACACAGCAACATCC...GAACGGGGCTCGTTTATCACCAGTGAGGAGCAGGACGTGAGCCCCCGCCCTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382072.6
ENST00000506639.5
CDS-3UTR CAA 90 bp AAAGGAAAGCTGACAGCCCAGAGACCCACGGGGAAACAGGCCCCGAGTTACTGGTGCTCCACCTTCCTCTaGCGATTGTTGAACGGCAGT +
Preference number: 5 (lower is better)
Translates to: KGKLTAQRPTGKQAPSYWCSTFL*RLLNGS
Trigger: ACTGCCGTTCAACAATCGCAAGAGGAAGGTGGAGCA...CCAGTAACTCGGGGCCTGTTTCCCCGTGGGTCTCTGGGCTGTCAGCTTTCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335606.11
ENST00000382072.6
CDS-3UTR CAA 90 bp AAAGGAAAGCTGACAGCCCAGAGACCCACGGGGAAACAGGCCCCGAGTTACTGGATGAAAGGATCCCTTTaGAAAGAAGGGATGGCTGGG +
Preference number: 5 (lower is better)
Translates to: KGKLTAQRPTGKQAPSYWMKGSL*KEGMAG
Trigger: CCCAGCCATCCCTTCTTTCAAAAGGGATCCTTTCAT...CCAGTAACTCGGGGCCTGTTTCCCCGTGGGTCTCTGGGCTGTCAGCTTTCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000506639.5
CDS GCA 90 bp CTTGCCAGTGCGTGTGCGGTCAAAAAGAGCCATTATAATGCCCAGTaGACACATAAGGCCACCACCAGCAAAGTCAGCCAGGAGATTCAG +
Preference number: 5 (lower is better)
Translates to: LASACAVKKSHYNAQ*THKATTSKVSQEIQ
Trigger: CTGAATCTCCTGGCTGACTTTGCTGGTGGTGGCCTTATGTGTGCACTGGGCATTATAATGGCTCTTTTTGACCGCACACGCACTGGCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000335606.11
ENST00000382085.7
ENST00000426255.6
ENST00000502637.5
ENST00000512079.5
CDS-3UTR CAA 90 bp AAAATCAAGTACTATATGGACACCAACATGGAGCAGAAAATGAGGGCAGCAGTGAGCACATCCGACCGCTaGCACAGACGCCGCAGCACG +
Preference number: 5 (lower is better)
Translates to: KIKYYMDTNMEQKMRAAVSTSDR*HRRRST
Trigger: CGTGCTGCGGCGTCTGTGCAAGCGGTCGGATGTGCT...CACTGCTGCCCTCATTTTCTGCTCCATGTTGGTGTCCATATAGTACTTGATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335606.11
ENST00000382072.6
CDS-3UTR CAA 90 bp CAGCTTTCCCATCACCCCTGCAACCATAGGAGTGGTCTTGGCTTCCTAGTTATGTGCTCCACCTTCCTCTaGCGATTGTTGAACGGCAGT +
Preference number: 5 (lower is better)
Translates to: QLSHHPCNHRSGLGFLVMCSTFL*RLLNGS
Trigger: ACTGCCGTTCAACAATCGCAAGAGGAAGGTGGAGCA...CATAACTAGGAAGCCAAGACCACTCCTATGGTTGCAGGGGTGATGGGAAAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335606.11
CDS GCA 90 bp AGCCATGAATTCCCCATCTGCTGTCCTGTAAGTCGTATAGAAAGGTaGTCCACCATCCAACATGTTCTGTCCTCGAGGTGCTTCCCACAG +
Preference number: 5 (lower is better)
Translates to: SHEFPICCPVSRIER*STIQHVLSSRCFPQ
Trigger: CTGTGGGAAGCACCTCGAGGACAGAACATGTTGGATGGTGGAGCACCTTTCTATACGACTTACAGGACAGCAGATGGGGAATTCATGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000335606.11
ENST00000382068.3
ENST00000382072.6
ENST00000382085.7
ENST00000426255.6
ENST00000502637.5
ENST00000506639.5
ENST00000512079.5
ENST00000514195.1
CDS-3UTR CAA 90 bp ATTCTTTTCTTGATTAGAGTGGTAGGACACTGTAATACTGTTCCTCCATGTTTCAGCACTAGCGAGCGCTaGCCCCGGCCCAAGCGGCTC +
Preference number: 5 (lower is better)
Translates to: ILFLIRVVGHCNTVPPCFSTSER*PRPKRL
Trigger: GAGCCGCTTGGGCCGGGGCAAGCGCTCGCTAGTGCT...GAAACATGGAGGAACAGTATTACAGTGTCCTACCACTCTAATCAAGAAAAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000502637.5
ENST00000506639.5
CDS GCA 90 bp TTCTCCCAGACCTTTGATCAGCAGCTCGTAGAACTGGGGTTCTATTaGTCCAACAGCCATGAATTCCCCATCTGCTGTCCTGTAAGTCGT +
Preference number: 5 (lower is better)
Translates to: FSQTFDQQLVELGFY*SNSHEFPICCPVSR
Trigger: ACGACTTACAGGACAGCAGATGGGGAATTCATGGCTGTTGGAGCAATAGAACCCCAGTTCTACGAGCTGCTGATCAAAGGTCTGGGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382068.3
ENST00000426255.6
CDS-3UTR CAA 90 bp AAAGGAAAGCTGACAGCCCAGAGACCCACGGGGAAACAGGCCCCGAGTTACTGGTCTGTAATTCTTTTCTaGATTAGAGTGGTAGGACAC +
Preference number: 5 (lower is better)
Translates to: KGKLTAQRPTGKQAPSYWSVILF*IRVVGH
Trigger: GTGTCCTACCACTCTAATCAAGAAAAGAATTACAGA...CCAGTAACTCGGGGCCTGTTTCCCCGTGGGTCTCTGGGCTGTCAGCTTTCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000506639.5
CDS-3UTR CAA 90 bp TCCAAGTACACCAGCTTTCCCATCACCCCTGCAACCATAGGAGTGGTCTTGGCTGGATGTTGCTGTGTGTaGGGTATAAGATCCAGAACT +
Preference number: 5 (lower is better)
Translates to: SKYTSFPITPATIGVVLAGCCCV*GIRSRT
Trigger: AGTTCTGGATCTTATACCCAACACACAGCAACATCC...AGCCAAGACCACTCCTATGGTTGCAGGGGTGATGGGAAAGCTGGTGTACTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335606.11
CDS-3UTR CAA 90 bp TTACTGGATACAGGCAACCCTAAAACTGACTGTCCCTCTGGACTCTACGTAGTGTGTGCCGTCAAAGATTaGACACCACTCTGCCTTCGT +
Preference number: 5 (lower is better)
Translates to: LLDTGNPKTDCPSGLYVVCAVKD*TPLCLR
Trigger: ACGAAGGCAGAGTGGTGTCAAATCTTTGACGGCACA...CACTACGTAGAGTCCAGAGGGACAGTCAGTTTTAGGGTTGCCTGTATCCAGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000506639.5
CDS-3UTR CAA 90 bp ATGGACACCAACATGGAGCAGAAAATGAGGGCAGCAGTGTCCAATCTCATTCCATGTGCCGTCAAAGATTaGACACCACTCTGCCTTCGT +
Preference number: 5 (lower is better)
Translates to: MDTNMEQKMRAAVSNLIPCAVKD*TPLCLR
Trigger: ACGAAGGCAGAGTGGTGTCAAATCTTTGACGGCACA...TGGAATGAGATTGGACACTGCTGCCCTCATTTTCTGCTCCATGTTGGTGTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335606.11
ENST00000382072.6
CDS GCA 90 bp GTAGAACTGGGGTTCTATTGCTCCAACAGCCATGAATTCCCCATCTaGTGTCCTGTAAGTCGTATAGAAAGGTGCTCCACCATCCAACAT +
Preference number: 5 (lower is better)
Translates to: VELGFYCSNSHEFPI*CPVSRIERCSTIQH
Trigger: ATGTTGGATGGTGGAGCACCTTTCTATACGACTTACAGGACAGCAGATGGGGAATTCATGGCTGTTGGAGCAATAGAACCCCAGTTCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000335606.11
ENST00000382068.3
ENST00000382072.6
ENST00000382085.7
ENST00000426255.6
ENST00000502637.5
ENST00000506639.5
ENST00000512079.5
ENST00000514195.1
CDS-3UTR CAA 90 bp TATTTCGTAGAAACGGAGGTCCAGCCAAGTTCCCCAGGCTGGTCTCGAACTCTTTGGGTTATATTTTCCTaGCTGGACCGAGTTCAAATG +
Preference number: 5 (lower is better)
Translates to: YFVETEVQPSSPGWSRTLWVIFS*LDRVQM
Trigger: CATTTGAACTCGGTCCAGCAAGGAAAATATAACCCA...AAGAGTTCGAGACCAGCCTGGGGAACTTGGCTGGACCTCCGTTTCTACGAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335606.11
CDS-3UTR CAA 90 bp CAGCTTTCCCATCACCCCTGCAACCATAGGAGTGGTCTTGGCTTCCTAGTTATGGAGAACAGGTCTGTTTaGTTCATTATGGTATCCCCA +
Preference number: 5 (lower is better)
Translates to: QLSHHPCNHRSGLGFLVMENRSV*FIMVSP
Trigger: TGGGGATACCATAATGAACAAAACAGACCTGTTCTC...CATAACTAGGAAGCCAAGACCACTCCTATGGTTGCAGGGGTGATGGGAAAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335606.11
CDS GCA 90 bp CGTATAGAAAGGTGCTCCACCATCCAACATGTTCTGTCCTCGAGGTaGTTCCCACAGACTCAATTTCATATTTGCATCAATGACCTGACC +
Preference number: 5 (lower is better)
Translates to: RIERCSTIQHVLSSR*FPQTQFHICINDLT
Trigger: GGTCAGGTCATTGATGCAAATATGAAATTGAGTCTGTGGGAAGCACCTCGAGGACAGAACATGTTGGATGGTGGAGCACCTTTCTATACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502637.5
CDS GCA 90 bp GTATCAAAGATCTTTGATCAGCAGCTCGTAGAACTGGGGTTCTATTaGTCCAACAGCCATGAATTCCCCATCTGCTGTCCTGTAAGTCGT +
Preference number: 5 (lower is better)
Translates to: VSKIFDQQLVELGFY*SNSHEFPICCPVSR
Trigger: ACGACTTACAGGACAGCAGATGGGGAATTCATGGCTGTTGGAGCAATAGAACCCCAGTTCTACGAGCTGCTGATCAAAGATCTTTGATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506639.5
ENST00000514195.1
CDS-3UTR CAA 90 bp GGGGGTCCTGAGATCTTTATTTCTGGATGTTGCTGTGTGTTGGGTATAAGATCCAGTATTCAAATTCACTaGAGCCGTGGGCCTGGAAGT +
Preference number: 5 (lower is better)
Translates to: GGPEIFISGCCCVLGIRSSIQIH*SRGPGS
Trigger: ACTTCCAGGCCCACGGCTCAAGTGAATTTGAATACT...GGATCTTATACCCAACACACAGCAACATCCAGAAATAAAGATCTCAGGACCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000506639.5
CDS-3UTR CAA 90 bp TTATTGATGGCCTACCCAACATCCATTCTCTACTCCCTCTACTCTGATGGCACCATCCTGTGTTTGTCTTaGATTTCCTCAAGAGCGGAG +
Preference number: 5 (lower is better)
Translates to: LLMAYPTSILYSLYSDGTILCLS*ISSRAE
Trigger: CTCCGCTCTTGAGGAAATCAAAGACAAACACAGGAT...GGTGCCATCAGAGTAGAGGGAGTAGAGAATGGATGTTGGGTAGGCCATCAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335606.11
CDS GCA 90 bp CGTATAGAAAGGTGCTCCACCATCCAACATGTTCTGTCCTCGAGGTaGTTCCCACAGACTCAATTTCTGAGTTTTCCACAGAAAAGAACT +
Preference number: 5 (lower is better)
Translates to: RIERCSTIQHVLSSR*FPQTQFLSFPQKRT
Trigger: AGTTCTTTTCTGTGGAAAACTCAGAAATTGAGTCTGTGGGAAGCACCTCGAGGACAGAACATGTTGGATGGTGGAGCACCTTTCTATACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000335606.11
ENST00000382068.3
ENST00000382072.6
ENST00000382085.7
ENST00000426255.6
ENST00000506639.5
ENST00000512079.5
ENST00000514195.1
CDS-3UTR CAA 90 bp ACACCAAGACAAAAGGCCTGGATGCAACCAATCACTCTGTTTCACGTGACTTTTATGAAAGGATCCCTTTaGAAAGAAGGGATGGCTGGG +
Preference number: 5 (lower is better)
Translates to: TPRQKAWMQPITLFHVTFMKGSL*KEGMAG
Trigger: CCCAGCCATCCCTTCTTTCAAAAGGGATCCTTTCAT...AAAAGTCACGTGAAACAGAGTGATTGGTTGCATCCAGGCCTTTTGTCTTGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000506639.5
CDS-3UTR CAA 90 bp GGCAACCCTAAAACTGACTGTCCCTCTGGACTCTACGTAGTGAGCCAACACATTCTTTATTTCTGGATGTaGCTGTGTGTTGGGTATAAG +
Preference number: 5 (lower is better)
Translates to: GNPKTDCPSGLYVVSQHILYFWM*LCVGYK
Trigger: CTTATACCCAACACACAGCAACATCCAGAAATAAAG...AATGTGTTGGCTCACTACGTAGAGTCCAGAGGGACAGTCAGTTTTAGGGTTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000506639.5
CDS-3UTR CAA 90 bp GTTGAGTCCAGGGAAGCTCCAGGAGCAGGCTGGTTTTATGTAAAGACAATCCCGTCAGATCTATTTCCTTaGGTGCTCTTTATCTTATGG +
Preference number: 5 (lower is better)
Translates to: VESREAPGAGWFYVKTIPSDLFP*VLFILW
Trigger: CCATAAGATAAAGAGCACCAAAGGAAATAGATCTGA...CGGGATTGTCTTTACATAAAACCAGCCTGCTCCTGGAGCTTCCCTGGACTCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335606.11
CDS-3UTR CAA 90 bp CAAAGATTTGACACCACTCTGCCTTCGTCTTCTCTGCAAATACATCTGCAAACTAGTATTCAAATTCACTaGAGCCGTGGGCCTGGAAGT +
Preference number: 5 (lower is better)
Translates to: QRFDTTLPSSSLQIHLQTSIQIH*SRGPGS
Trigger: ACTTCCAGGCCCACGGCTCAAGTGAATTTGAATACT...AGTTTGCAGATGTATTTGCAGAGAAGACGAAGGCAGAGTGGTGTCAAATCTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382072.6
ENST00000506639.5
CDS-3UTR CAA 90 bp AAGTCAGAACCGGAGTCACACAGGCATCTGTGCCGTCAAAGATTTGACACCACTTCTGTAATTCTTTTCTaGATTAGAGTGGTAGGACAC +
Preference number: 5 (lower is better)
Translates to: KSEPESHRHLCRQRFDTTSVILF*IRVVGH
Trigger: GTGTCCTACCACTCTAATCAAGAAAAGAATTACAGA...AGTGGTGTCAAATCTTTGACGGCACAGATGCCTGTGTGACTCCGGTTCTGACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382072.6
ENST00000506639.5
CDS-3UTR CAA 90 bp TTATTGATGGCCTACCCAACATCCATTCTCTACTCCCTCTACTCTGATGGCACCACAATCCCGTCTTCTTaGTCAAAGACAGGTATAAGA +
Preference number: 5 (lower is better)
Translates to: LLMAYPTSILYSLYSDGTTIPSS*SKTGIR
Trigger: TCTTATACCTGTCTTTGACAAAGAAGACGGGATTGT...GGTGCCATCAGAGTAGAGGGAGTAGAGAATGGATGTTGGGTAGGCCATCAATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335606.11
ENST00000382072.6
CDS-3UTR CAA 90 bp GCAACCAATCACTCTGTTTCACGTGACTTTTATCACCATACAATTTGTGGCATTCAGGTTCTTGTTCTGTaGCCTGGGCTAGAGTGCAGT +
Preference number: 5 (lower is better)
Translates to: ATNHSVSRDFYHHTICGIQVLVL*PGLECS
Trigger: ACTGCACTCTAGCCCAGGCAACAGAACAAGAACCTG...AATGCCACAAATTGTATGGTGATAAAAGTCACGTGAAACAGAGTGATTGGTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335606.11
CDS-3UTR CAA 90 bp GCTCCAGGAGCAGGCTGGTTTTATGTAAAGACAATCCCGTCTTCTTTGTCAAAGCTTTATTTCTGGATGTaGCTGTGTGTTGGGTATAAG +
Preference number: 5 (lower is better)
Translates to: APGAGWFYVKTIPSSLSKLYFWM*LCVGYK
Trigger: CTTATACCCAACACACAGCAACATCCAGAAATAAAG...CTTTGACAAAGAAGACGGGATTGTCTTTACATAAAACCAGCCTGCTCCTGGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000506639.5
CDS-3UTR CAA 90 bp GCTCCAGGAGCAGGCTGGTTTTATGTAAAGACAATCCCGTCTTCTTTGTCAAAGACAATCCCGTCTTCTTaGTCAAAGACAGGTATAAGA +
Preference number: 5 (lower is better)
Translates to: APGAGWFYVKTIPSSLSKTIPSS*SKTGIR
Trigger: TCTTATACCTGTCTTTGACAAAGAAGACGGGATTGT...CTTTGACAAAGAAGACGGGATTGTCTTTACATAAAACCAGCCTGCTCCTGGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000506639.5
CDS-3UTR CAA 90 bp TGGATGCAACCAATCACTCTGTTTCACGTGACTTTTATCACCATACAATTTGTGATGTTCCTATCAGGGTaGCCTCACTATCTTCTGGGC +
Preference number: 5 (lower is better)
Translates to: WMQPITLFHVTFITIQFVMFLSG*PHYLLG
Trigger: GCCCAGAAGATAGTGAGGCAACCCTGATAGGAACAT...CACAAATTGTATGGTGATAAAAGTCACGTGAAACAGAGTGATTGGTTGCATCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335606.11
CDS TCA 90 bp TCTGCAAACTTCTTCTTCATTTCTGGCCAATCATCCATGCTCATCTaGTTGGGAAGTTCATCAGACTTTAGTCCAAGTCCTTTGATCAGC +
Preference number: 5 (lower is better)
Translates to: SANFFFISGQSSMLI*LGSSSDFSPSPLIS
Trigger: GCTGATCAAAGGACTTGGACTAAAGTCTGATGAACTTCCCAATCAGATGAGCATGGATGATTGGCCAGAAATGAAGAAGAAGTTTGCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000382085.7
ENST00000502637.5
CDS-3UTR CAA 90 bp ATTCTTTTCTTGATTAGAGTGGTAGGACACTGTAATACTGTTCCTCCATGTTTCTGTGCCGTCAAAGATTaGACACCACTCTGCCTTCGT +
Preference number: 5 (lower is better)
Translates to: ILFLIRVVGHCNTVPPCFCAVKD*TPLCLR
Trigger: ACGAAGGCAGAGTGGTGTCAAATCTTTGACGGCACA...GAAACATGGAGGAACAGTATTACAGTGTCCTACCACTCTAATCAAGAAAAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000502637.5
ENST00000506639.5
CDS-3UTR CAA 90 bp GGCTTCTCTGCTCTTTCGTCACCAGTGGAATTCTTTATATTAAATTTCCTCTGTAGTATTCAAATTCACTaGAGCCGTGGGCCTGGAAGT +
Preference number: 5 (lower is better)
Translates to: GFSALSSPVEFFILNFLCSIQIH*SRGPGS
Trigger: ACTTCCAGGCCCACGGCTCAAGTGAATTTGAATACT...ACAGAGGAAATTTAATATAAAGAATTCCACTGGTGACGAAAGAGCAGAGAAGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335606.11
CDS-3UTR CAA 90 bp GCTCCAGGAGCAGGCTGGTTTTATGTAAAGACAATCCCGTCTTCTTTGTCAAAGTCTGTAATTCTTTTCTaGATTAGAGTGGTAGGACAC +
Preference number: 5 (lower is better)
Translates to: APGAGWFYVKTIPSSLSKSVILF*IRVVGH
Trigger: GTGTCCTACCACTCTAATCAAGAAAAGAATTACAGA...CTTTGACAAAGAAGACGGGATTGTCTTTACATAAAACCAGCCTGCTCCTGGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000506639.5
CDS-3UTR CAA 90 bp TTCCTTGTTGTGATCATGATGAACAACCTCCTCAAAAGTCAGAACCGGAGTCACCTTTATTTCTGGATGTaGCTGTGTGTTGGGTATAAG +
Preference number: 5 (lower is better)
Translates to: FLVVIMMNNLLKSQNRSHLYFWM*LCVGYK
Trigger: CTTATACCCAACACACAGCAACATCCAGAAATAAAG...GTGACTCCGGTTCTGACTTTTGAGGAGGTTGTTCATCATGATCACAACAAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382072.6
ENST00000506639.5
CDS TCA 90 bp TCTGCAAACTTCTTCTTCATTTCTGGCCAATCATCCATGCTCATCTaGTTGGGAAGTTCATCAGACTTTAGTCCAAGTCGTTCAGAAACT +
Preference number: 5 (lower is better)
Translates to: SANFFFISGQSSMLI*LGSSSDFSPSRSET
Trigger: AGTTTCTGAACGACTTGGACTAAAGTCTGATGAACTTCCCAATCAGATGAGCATGGATGATTGGCCAGAAATGAAGAAGAAGTTTGCAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514195.1
CDS CCA 90 bp CAAACTTCTTCTTCATTTCTGGCCAATCATCCATGCTCATCTGATTaGGAAGTTCATCAGACTTTAGTCCAAGTCGTTCAGAAACTGAAG +
Preference number: 5 (lower is better)
Translates to: QTSSSFLANHPCSSD*EVHQTLVQVVQKLK
Trigger: CTTCAGTTTCTGAACGACTTGGACTAAAGTCTGATGAACTTCCCAATCAGATGAGCATGGATGATTGGCCAGAAATGAAGAAGAAGTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514195.1
CDS-3UTR CAA 90 bp ATTCTTTTCTTGATTAGAGTGGTAGGACACTGTAATACTGTTCCTCCATGTTTCAGTATTCAAATTCACTaGAGCCGTGGGCCTGGAAGT +
Preference number: 5 (lower is better)
Translates to: ILFLIRVVGHCNTVPPCFSIQIH*SRGPGS
Trigger: ACTTCCAGGCCCACGGCTCAAGTGAATTTGAATACT...GAAACATGGAGGAACAGTATTACAGTGTCCTACCACTCTAATCAAGAAAAGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000502637.5
ENST00000506639.5
CDS-3UTR CAA 90 bp TCAGAGTCTGTAATTCTTTTCTTGATTAGAGTGGTAGGACACTGTAATACTGTTATGAAAGGATCCCTTTaGAAAGAAGGGATGGCTGGG +
Preference number: 5 (lower is better)
Translates to: SESVILFLIRVVGHCNTVMKGSL*KEGMAG
Trigger: CCCAGCCATCCCTTCTTTCAAAAGGGATCCTTTCAT...AACAGTATTACAGTGTCCTACCACTCTAATCAAGAAAAGAATTACAGACTCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000502637.5
ENST00000506639.5
CDS-3UTR CAA 90 bp AAGTATCTCCTCAGTGTGTTCTCCTATGAAAGGATCCCTTTTGAAAGAAGGGATACAATCCCGTCTTCTTaGTCAAAGACAGGTATAAGA +
Preference number: 5 (lower is better)
Translates to: KYLLSVFSYERIPFERRDTIPSS*SKTGIR
Trigger: TCTTATACCTGTCTTTGACAAAGAAGACGGGATTGT...ATCCCTTCTTTCAAAAGGGATCCTTTCATAGGAGAACACACTGAGGAGATACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382072.6
ENST00000506639.5
CDS-3UTR CAA 90 bp TCAGAGTCTGTAATTCTTTTCTTGATTAGAGTGGTAGGACACTGTAATACTGTTGGATGTTGCTGTGTGTaGGGTATAAGATCCAGAACT +
Preference number: 5 (lower is better)
Translates to: SESVILFLIRVVGHCNTVGCCCV*GIRSRT
Trigger: AGTTCTGGATCTTATACCCAACACACAGCAACATCC...AACAGTATTACAGTGTCCTACCACTCTAATCAAGAAAAGAATTACAGACTCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000506639.5
CDS-3UTR CAA 90 bp TCAGAGTCTGTAATTCTTTTCTTGATTAGAGTGGTAGGACACTGTAATACTGTTTCTGTAATTCTTTTCTaGATTAGAGTGGTAGGACAC +
Preference number: 5 (lower is better)
Translates to: SESVILFLIRVVGHCNTVSVILF*IRVVGH
Trigger: GTGTCCTACCACTCTAATCAAGAAAAGAATTACAGA...AACAGTATTACAGTGTCCTACCACTCTAATCAAGAAAAGAATTACAGACTCTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000502637.5
ENST00000506639.5
CDS-3UTR CAA 90 bp TCAGAGTCTGTAATTCTTTTCTTGATTAGAGTGGTAGGACACTGTAATACTGTTTTCCATATCCTGTGTTaGTCTTTGATTTCCTCAAGA +
Preference number: 5 (lower is better)
Translates to: SESVILFLIRVVGHCNTVFHILC*SLISSR
Trigger: TCTTGAGGAAATCAAAGACAAACACAGGATATGGAA...AACAGTATTACAGTGTCCTACCACTCTAATCAAGAAAAGAATTACAGACTCTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335606.11
CDS CAA 72 bp CCGCGGCGGAAGGGCTCCAGCAGCACATCCGACCGCTaGCACAGACGCCGCAGCACGGCGGCTCCCCGCGGC +
Preference number: 6 (lower is better)
Translates to: PRRKGSSSTSDR*HRRRSTAAPRG
Trigger: GCCGCGGGGAGCCGCCGTGCTGCGGCGTCTGTGCAAGCGGTCGGATGTGCTGCTGGAGCCCTTCCGCCGCGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000335606.11
ENST00000382068.3
ENST00000382072.6
ENST00000382085.7
ENST00000426255.6
ENST00000502637.5
ENST00000506639.5
ENST00000512079.5
ENST00000514195.1
CDS GCA 72 bp GGCCCGGGGCCAGGCCGGACAGCTCCACGACCGAGATaGCCTGCAGTGCCATGGCGCTTCCCAGTGCCCCGC +
Preference number: 6 (lower is better)
Translates to: GPGPGRTAPRPR*PAVPWRFPVPR
Trigger: GCGGGGCACTGGGAAGCGCCATGGCACTGCAGGGCATCTCGGTCGTGGAGCTGTCCGGCCTGGCCCCGGGCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000426255.6
ENST00000502637.5
CDS GCA 72 bp CGCGGCGGAAGGGCTCCAGCAGCACATCCGACCGCTTaGACAGACGCCGCAGCACGGCGGCTCCCCGCGGCT +
Preference number: 6 (lower is better)
Translates to: RGGRAPAAHPTA*TDAAARRLPAA
Trigger: AGCCGCGGGGAGCCGCCGTGCTGCGGCGTCTGTGCAAGCGGTCGGATGTGCTGCTGGAGCCCTTCCGCCGCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000335606.11
ENST00000382068.3
ENST00000382072.6
ENST00000382085.7
ENST00000426255.6
ENST00000502637.5
ENST00000506639.5
ENST00000512079.5
ENST00000514195.1
CDS GCA 72 bp CCCGCGGCTGCTTCAGGTCCAGCACTAGCGAGCGCTTaGCCCGGCCCAAGCGGCTCACGTCGTAGCGGGAGC +
Preference number: 6 (lower is better)
Translates to: PAAASGPALASA*PGPSGSRRSGS
Trigger: GCTCCCGCTACGACGTGAGCCGCTTGGGCCGGGGCAAGCGCTCGCTAGTGCTGGACCTGAAGCAGCCGCGGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000335606.11
ENST00000382068.3
ENST00000382072.6
ENST00000382085.7
ENST00000426255.6
ENST00000502637.5
ENST00000506639.5
ENST00000512079.5
ENST00000514195.1
CDS GCA 72 bp TTGCACAGACGCCGCAGCACGGCGGCTCCCCGCGGCTaGTTCAGGTCCAGCACTAGCGAGCGCTTGCCCCGG +
Preference number: 6 (lower is better)
Translates to: LHRRRSTAAPRG*FRSSTSERLPR
Trigger: CCGGGGCAAGCGCTCGCTAGTGCTGGACCTGAAGCAGCCGCGGGGAGCCGCCGTGCTGCGGCGTCTGTGCAA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000335606.11
ENST00000382068.3
ENST00000382072.6
ENST00000382085.7
ENST00000426255.6
ENST00000502637.5
ENST00000506639.5
ENST00000512079.5
ENST00000514195.1
CDS CAA 90 bp TCCATGACACCGCGGCGGAAGGGCTCCAGCAGCACATCCGACCGCTaGCACAGACGCCGCAGCACGGCGGCTCCCCGCGGCTGCTTCAGG +
Preference number: 6 (lower is better)
Translates to: SMTPRRKGSSSTSDR*HRRRSTAAPRGCFR
Trigger: CCTGAAGCAGCCGCGGGGAGCCGCCGTGCTGCGGCGTCTGTGCAAGCGGTCGGATGTGCTGCTGGAGCCCTTCCGCCGCGGTGTCATGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000335606.11
ENST00000382068.3
ENST00000382072.6
ENST00000382085.7
ENST00000426255.6
ENST00000502637.5
ENST00000506639.5
ENST00000512079.5
ENST00000514195.1
CDS GCA 72 bp GGGGCCAGGCCGGACAGCTCCACGACCGAGATGCCCTaGAGTGCCATGGCGCTTCCCAGTGCCCCGCTGAAG +
Preference number: 6 (lower is better)
Translates to: GARPDSSTTEMP*SAMALPSAPLK
Trigger: CTTCAGCGGGGCACTGGGAAGCGCCATGGCACTGCAGGGCATCTCGGTCGTGGAGCTGTCCGGCCTGGCCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335606.11
ENST00000426255.6
ENST00000502637.5
CDS CCA 72 bp CTTGGATTTTCCCGCTGCAGAATCTCTGGGCCCAGCTaGAGTTTCTCCATGACACCGCGGCGGAAGGGCTCC +
Preference number: 6 (lower is better)
Translates to: LGFSRCRISGPS*SFSMTPRRKGS
Trigger: GGAGCCCTTCCGCCGCGGTGTCATGGAGAAACTCCAGCTGGGCCCAGAGATTCTGCAGCGGGAAAATCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000335606.11
ENST00000382068.3
ENST00000382072.6
ENST00000382085.7
ENST00000426255.6
ENST00000502637.5
ENST00000506639.5
ENST00000512079.5
ENST00000514195.1
CDS CCA 72 bp ATAAATAAGCCTTGGATTTTCCCGCTGCAGAATCTCTaGGCCCAGCTGGAGTTTCTCCATGACACCGCGGCG +
Preference number: 6 (lower is better)
Translates to: INKPWIFPLQNL*AQLEFLHDTAA
Trigger: CGCCGCGGTGTCATGGAGAAACTCCAGCTGGGCCCAGAGATTCTGCAGCGGGAAAATCCAAGGCTTATTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000335606.11
ENST00000382068.3
ENST00000382072.6
ENST00000382085.7
ENST00000426255.6
ENST00000502637.5
ENST00000506639.5
ENST00000512079.5
ENST00000514195.1
CDS CCA 72 bp CTGGCCAAATCCACTCAGCCTGGCATAAATAAGCCTTaGATTTTCCCGCTGCAGAATCTCTGGGCCCAGCTG +
Preference number: 6 (lower is better)
Translates to: LAKSTQPGINKP*IFPLQNLWAQL
Trigger: CAGCTGGGCCCAGAGATTCTGCAGCGGGAAAATCCAAGGCTTATTTATGCCAGGCTGAGTGGATTTGGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000335606.11
ENST00000382068.3
ENST00000382072.6
ENST00000382085.7
ENST00000426255.6
ENST00000502637.5
ENST00000506639.5
ENST00000512079.5
ENST00000514195.1
CDS GCA 72 bp GCGTGTGCGGTCAAAAAGAGCCATTATAATGCCCAGTaGACACATAAGGCCACCACCAGCAAAGTCAGCCAG +
Preference number: 6 (lower is better)
Translates to: ACAVKKSHYNAQ*THKATTSKVSQ
Trigger: CTGGCTGACTTTGCTGGTGGTGGCCTTATGTGTGCACTGGGCATTATAATGGCTCTTTTTGACCGCACACGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000335606.11
ENST00000382085.7
ENST00000426255.6
ENST00000502637.5
ENST00000512079.5
CDS GCA 72 bp GCCTTTGATCAGCAGCTCGTAGAACTGGGGTTCTATTaGTCCAACAGCCATGAATTCCCCATCTGCTGTCCT +
Preference number: 6 (lower is better)
Translates to: AFDQQLVELGFY*SNSHEFPICCP
Trigger: AGGACAGCAGATGGGGAATTCATGGCTGTTGGAGCAATAGAACCCCAGTTCTACGAGCTGCTGATCAAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512079.5
CDS GCA 72 bp GGGTTCTATTGCTCCAACAGCCATGAATTCCCCATCTaGTGTCCTGTAAGTCGTATAGAAAGGTGCTCCACC +
Preference number: 6 (lower is better)
Translates to: GFYCSNSHEFPI*CPVSRIERCST
Trigger: GGTGGAGCACCTTTCTATACGACTTACAGGACAGCAGATGGGGAATTCATGGCTGTTGGAGCAATAGAACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000335606.11
ENST00000382068.3
ENST00000382072.6
ENST00000382085.7
ENST00000426255.6
ENST00000502637.5
ENST00000506639.5
ENST00000512079.5
ENST00000514195.1
CDS GCA 72 bp TCCTTTGATCAGCAGCTCGTAGAACTGGGGTTCTATTaGTCCAACAGCCATGAATTCCCCATCTGCTGTCCT +
Preference number: 6 (lower is better)
Translates to: SFDQQLVELGFY*SNSHEFPICCP
Trigger: AGGACAGCAGATGGGGAATTCATGGCTGTTGGAGCAATAGAACCCCAGTTCTACGAGCTGCTGATCAAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335606.11
ENST00000382072.6
ENST00000382085.7
ENST00000502637.5
CDS GCA 72 bp ACCTTTGATCAGCAGCTCGTAGAACTGGGGTTCTATTaGTCCAACAGCCATGAATTCCCCATCTGCTGTCCT +
Preference number: 6 (lower is better)
Translates to: TFDQQLVELGFY*SNSHEFPICCP
Trigger: AGGACAGCAGATGGGGAATTCATGGCTGTTGGAGCAATAGAACCCCAGTTCTACGAGCTGCTGATCAAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382068.3
ENST00000426255.6
CDS TCA 72 bp GCTCGTAGAACTGGGGTTCTATTGCTCCAACAGCCATaGATTCCCCATCTGCTGTCCTGTAAGTCGTATAGA +
Preference number: 6 (lower is better)
Translates to: ARRTGVLLLQQP*IPHLLSCKSYR
Trigger: TCTATACGACTTACAGGACAGCAGATGGGGAATTCATGGCTGTTGGAGCAATAGAACCCCAGTTCTACGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000335606.11
ENST00000382068.3
ENST00000382072.6
ENST00000382085.7
ENST00000426255.6
ENST00000502637.5
ENST00000506639.5
ENST00000512079.5
ENST00000514195.1
CDS TCA 72 bp ATATGCTGTTCCTTCCACCTGACAAAGCCAAATAGTTaGTATCGTGGCCAGCTAACCGGCAGAAGCTTCCTG +
Preference number: 6 (lower is better)
Translates to: ICCSFHLTKPNS*YRGQLTGRSFL
Trigger: CAGGAAGCTTCTGCCGGTTAGCTGGCCACGATATCAACTATTTGGCTTTGTCAGGTGGAAGGAACAGCATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382068.3
ENST00000382072.6
ENST00000506639.5
ENST00000514195.1
CDS TCA 72 bp TCCCACAGACTCAATTTCATATTTGCATCAATGACCTaGCCCTTGCCAGTGCGTGTGCGGTCAAAAAGAGCC +
Preference number: 6 (lower is better)
Translates to: SHRLNFIFASMT*PLPVRVRSKRA
Trigger: GGCTCTTTTTGACCGCACACGCACTGGCAAGGGTCAGGTCATTGATGCAAATATGAAATTGAGTCTGTGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502637.5
CDS GCA 72 bp ATCTTTGATCAGCAGCTCGTAGAACTGGGGTTCTATTaGTCCAACAGCCATGAATTCCCCATCTGCTGTCCT +
Preference number: 6 (lower is better)
Translates to: IFDQQLVELGFY*SNSHEFPICCP
Trigger: AGGACAGCAGATGGGGAATTCATGGCTGTTGGAGCAATAGAACCCCAGTTCTACGAGCTGCTGATCAAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506639.5
ENST00000514195.1
CDS TCA 72 bp GTGCTTCCCACAGACTCAATTTCATATTTGCATCAATaGCCTGACCCTTGCCAGTGCGTGTGCGGTCAAAAA +
Preference number: 6 (lower is better)
Translates to: VLPTDSISYLHQ*PDPCQCVCGQK
Trigger: TTTTTGACCGCACACGCACTGGCAAGGGTCAGGTCATTGATGCAAATATGAAATTGAGTCTGTGGGAAGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502637.5
CDS TCA 72 bp CAATTTTTGAGAGAACACCTGACAAAGCCAAATAGTTaGTATCGTGGCCAGCTAACCGGCAGAAGCTTCCTG +
Preference number: 6 (lower is better)
Translates to: QFLREHLTKPNS*YRGQLTGRSFL
Trigger: CAGGAAGCTTCTGCCGGTTAGCTGGCCACGATATCAACTATTTGGCTTTGTCAGGTGTTCTCTCAAAAATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000335606.11
ENST00000382085.7
ENST00000426255.6
ENST00000502637.5
ENST00000512079.5
CDS TCA 72 bp TTCTTCTTCATTTCTGGCCAATCATCCATGCTCATCTaGTTGGGAAGTTCATCAGACTTTAGTCCAAGTCGT +
Preference number: 6 (lower is better)
Translates to: FFFISGQSSMLI*LGSSSDFSPSR
Trigger: ACGACTTGGACTAAAGTCTGATGAACTTCCCAATCAGATGAGCATGGATGATTGGCCAGAAATGAAGAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514195.1