RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ALX4 (Homo sapiens)

Ensembl gene IDs: ENSG00000052850

Ensembl transcript IDs: ENST00000652299.1

Found 345 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GAGGCATTGGAGAGGGGAGCTCCATGCAGCACCGGCCGCCCCTGGTaGCAACGAAGCCCAGGCCCTCACACCCTGGGTGGCACGTCCCAG +
Preference number: 1 (lower is better)
Translates to: EALERGAPCSTGRPW*QRSPGPHTLGGTSQ
Trigger: CTGGGACGTGCCACCCAGGGTGTGAGGGCCTGGGCTTCGTTGGCACCAGGGGCGGCCGGTGCTGCATGGAGCTCCCCTCTCCAATGCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR GCA 90 bp TCTGGATGGAGAACAAAGCTGCCCAGACCTCCCCGCTGTACCAGATaGCAGGCAGGCCGGAGAGCGGGAGGACTGCCCGGGCCCACGCCC +
Preference number: 1 (lower is better)
Translates to: SGWRTKLPRPPRCTR*QAGRRAGGLPGPTP
Trigger: GGGCGTGGGCCCGGGCAGTCCTCCCGCTCTCCGGCCTGCCTGGCATCTGGTACAGCGGGGAGGTCTGGGCAGCTTTGTTCTCCATCCAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR CCA 90 bp CATGAGGCATTGGAGAGGGGAGCTCCATGCAGCACCGGCCGCCCCTaGTGCCAACGAAGCCCAGGCCCTCACACCCTGGGTGGCACGTCC +
Preference number: 1 (lower is better)
Translates to: HEALERGAPCSTGRP*CQRSPGPHTLGGTS
Trigger: GGACGTGCCACCCAGGGTGTGAGGGCCTGGGCTTCGTTGGCACCAGGGGCGGCCGGTGCTGCATGGAGCTCCCCTCTCCAATGCCTCATG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR TCA 90 bp GGGCAGGGAAGAGACGAGCCCCTCCGCATCCTCCTGGAGGGAACCTaGCTGGGCTCTGGATGGAGAACAAAGCTGCCCAGACCTCCCCGC +
Preference number: 1 (lower is better)
Translates to: GQGRDEPLRILLEGT*LGSGWRTKLPRPPR
Trigger: GCGGGGAGGTCTGGGCAGCTTTGTTCTCCATCCAGAGCCCAGTCAGGTTCCCTCCAGGAGGATGCGGAGGGGCTCGTCTCTTCCCTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR TCA 90 bp GGGTCTGACAGGCCTGCCTCTGGACGGTTACTGTGTACTCCCAGCTaGGGTGAGGGCTGGGGCTCAGGGCCAGACCCAAGCTACAGGGGT +
Preference number: 1 (lower is better)
Translates to: GSDRPASGRLLCTPS*GEGWGSGPDPSYRG
Trigger: ACCCCTGTAGCTTGGGTCTGGCCCTGAGCCCCAGCCCTCACCTCAGCTGGGAGTACACAGTAACCGTCCAGAGGCAGGCCTGTCAGACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR GCA 90 bp TCCTCCTGGAGGGAACCTGACTGGGCTCTGGATGGAGAACAAAGCTaGCCAGACCTCCCCGCTGTACCAGATGCCAGGCAGGCCGGAGAG +
Preference number: 1 (lower is better)
Translates to: SSWREPDWALDGEQS*PDLPAVPDARQAGE
Trigger: CTCTCCGGCCTGCCTGGCATCTGGTACAGCGGGGAGGTCTGGGCAGCTTTGTTCTCCATCCAGAGCCCAGTCAGGTTCCCTCCAGGAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR TCA 90 bp TCTGCCACCCGGCCCCCAAGCTCTAGCTTATGTGTTCCGAAGTTGTaGGTCCTTCCATGCCGGGACACTGCTGAGCAGCCCCAGGGAGGG +
Preference number: 1 (lower is better)
Translates to: SATRPPSSSLCVPKL*VLPCRDTAEQPQGG
Trigger: CCCTCCCTGGGGCTGCTCAGCAGTGTCCCGGCATGGAAGGACTCACAACTTCGGAACACATAAGCTAGAGCTTGGGGGCCGGGTGGCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR GCA 90 bp CTTGGGTCTAGCCCAGCCAGAGAGCAGACGCATGGAGGAACTGAGTaGCGGGGGCCACTGCGGAAGAGCCCCCTTAAAGCTCTCACTCTC +
Preference number: 1 (lower is better)
Translates to: LGSSPAREQTHGGTE*RGPLRKSPLKALTL
Trigger: GAGAGTGAGAGCTTTAAGGGGGCTCTTCCGCAGTGGCCCCCGGCACTCAGTTCCTCCATGCGTCTGCTCTCTGGCTGGGCTAGACCCAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR TCA 90 bp CCCAAGGTTCTCTTCTGGAGAACTGAGCTGCTGAGTGAATGCCCATaGGGCATTGGAGAGGGGAGCTCCATGCAGCACCGGCCGCCCCTG +
Preference number: 1 (lower is better)
Translates to: PKVLFWRTELLSECP*GIGEGSSMQHRPPL
Trigger: CAGGGGCGGCCGGTGCTGCATGGAGCTCCCCTCTCCAATGCCTCATGGGCATTCACTCAGCAGCTCAGTTCTCCAGAAGAGAACCTTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR GCA 90 bp GAGGCAGGAAGCCTGGTTTCAGGAGGGCATCCTGACAGCCCCATTTaGAATAGCAAAGCCACACCGAGGAGCCCAGGCCAGGAGCCCTTC +
Preference number: 1 (lower is better)
Translates to: EAGSLVSGGHPDSPI*NSKATPRSPGQEPF
Trigger: GAAGGGCTCCTGGCCTGGGCTCCTCGGTGTGGCTTTGCTATTGCAAATGGGGCTGTCAGGATGCCCTCCTGAAACCAGGCTTCCTGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR CCA 90 bp CAACACCTCCTAGTGCCTGGAGGGACACAGAGCCCCCATCTGCCGTaGAAGGCTCTGGGCAGCGATGACACTGACAGATATGGCAGGGAG +
Preference number: 1 (lower is better)
Translates to: QHLLVPGGTQSPHLP*KALGSDDTDRYGRE
Trigger: CTCCCTGCCATATCTGTCAGTGTCATCGCTGCCCAGAGCCTTCCACGGCAGATGGGGGCTCTGTGTCCCTCCAGGCACTAGGAGGTGTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR CCA 90 bp GGAGTGTGGAAAGCTGTGTGGAGAAGAGCAACACCTCCTAGTGCCTaGAGGGACACAGAGCCCCCATCTGCCGTGGAAGGCTCTGGGCAG +
Preference number: 1 (lower is better)
Translates to: GVWKAVWRRATPPSA*RDTEPPSAVEGSGQ
Trigger: CTGCCCAGAGCCTTCCACGGCAGATGGGGGCTCTGTGTCCCTCCAGGCACTAGGAGGTGTTGCTCTTCTCCACACAGCTTTCCACACTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR CCA 90 bp TCGGGCAGGCAGGCACAGAGCCCCGCTTCCTGGAGGCAGGAAGCCTaGTTTCAGGAGGGCATCCTGACAGCCCCATTTGCAATAGCAAAG +
Preference number: 1 (lower is better)
Translates to: SGRQAQSPASWRQEA*FQEGILTAPFAIAK
Trigger: CTTTGCTATTGCAAATGGGGCTGTCAGGATGCCCTCCTGAAACCAGGCTTCCTGCCTCCAGGAAGCGGGGCTCTGTGCCTGCCTGCCCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR GCA 90 bp CTGACTTGCTCAGTCATCCTAGGAGCTGACACGGCAGTGGCCCCCTaGTCTGCAGTGCAGAAGGTTGGGCCTAGCCACCTGTCTTGGAAG +
Preference number: 1 (lower is better)
Translates to: LTCSVILGADTAVAP*SAVQKVGPSHLSWK
Trigger: CTTCCAAGACAGGTGGCTAGGCCCAACCTTCTGCACTGCAGAGCAGGGGGCCACTGCCGTGTCAGCTCCTAGGATGACTGAGCAAGTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR CCA 90 bp CGCTTTCAGCTTATCATGGATGCGAAGCTGAAAAACGTGGCCACCTaGCTTTCTCCACTGCCTGTGGCCGGGAGCAGGGGTCAGGGCCTC +
Preference number: 1 (lower is better)
Translates to: RFQLIMDAKLKNVAT*LSPLPVAGSRGQGL
Trigger: GAGGCCCTGACCCCTGCTCCCGGCCACAGGCAGTGGAGAAAGCCAGGTGGCCACGTTTTTCAGCTTCGCATCCATGATAAGCTGAAAGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR CCA 90 bp CGGATGCCTCCCCCTCTCCCAGGACCTTTCCTTCTTCTAGCACCATaGGAGCCCTTGTGGCATCTGTGTTCTCAGCCTCCCTCAGGTCTG +
Preference number: 1 (lower is better)
Translates to: RMPPPLPGPFLLLAP*EPLWHLCSQPPSGL
Trigger: CAGACCTGAGGGAGGCTGAGAACACAGATGCCACAAGGGCTCCCATGGTGCTAGAAGAAGGAAAGGTCCTGGGAGAGGGGGAGGCATCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR TCA 90 bp GGAAGGGACTGGGCCCCAAGGTTCTCTTCTGGAGAACTGAGCTGCTaGGTGAATGCCCATGAGGCATTGGAGAGGGGAGCTCCATGCAGC +
Preference number: 1 (lower is better)
Translates to: GRDWAPRFSSGELSC*VNAHEALERGAPCS
Trigger: GCTGCATGGAGCTCCCCTCTCCAATGCCTCATGGGCATTCACTCAGCAGCTCAGTTCTCCAGAAGAGAACCTTGGGGCCCAGTCCCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR GCA 90 bp TTCATGAGCTTTAGCTCCAGATGGCCTTGGGCAGCTGCCCTGACTTaGTCAGTCATCCTAGGAGCTGACACGGCAGTGGCCCCCTGCTCT +
Preference number: 1 (lower is better)
Translates to: FMSFSSRWPWAAALT*SVILGADTAVAPCS
Trigger: AGAGCAGGGGGCCACTGCCGTGTCAGCTCCTAGGATGACTGAGCAAGTCAGGGCAGCTGCCCAAGGCCATCTGGAGCTAAAGCTCATGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR CCA 90 bp GCTGGTGAGGCTGCTGGGTCTGCATGGAAATCTAGCATTGACTCATaGTCAACTAGGCAGAGCAGAGGAGTGGGCGGGAGCAAGAAAGCG +
Preference number: 1 (lower is better)
Translates to: AGEAAGSAWKSSIDS*STRQSRGVGGSKKA
Trigger: CGCTTTCTTGCTCCCGCCCACTCCTCTGCTCTGCCTAGTTGACCATGAGTCAATGCTAGATTTCCATGCAGACCCAGCAGCCTCACCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR CCA 90 bp TGGTCCCTGTGGAAGAAGTGTAAGGACGGAGTGTGGAAAGCTGTGTaGAGAAGAGCAACACCTCCTAGTGCCTGGAGGGACACAGAGCCC +
Preference number: 1 (lower is better)
Translates to: WSLWKKCKDGVWKAV*RRATPPSAWRDTEP
Trigger: GGGCTCTGTGTCCCTCCAGGCACTAGGAGGTGTTGCTCTTCTCCACACAGCTTTCCACACTCCGTCCTTACACTTCTTCCACAGGGACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR CCA 90 bp GGCAGAGAGTCCTGGTCCCTGTGGAAGAAGTGTAAGGACGGAGTGTaGAAAGCTGTGTGGAGAAGAGCAACACCTCCTAGTGCCTGGAGG +
Preference number: 1 (lower is better)
Translates to: GRESWSLWKKCKDGV*KAVWRRATPPSAWR
Trigger: CCTCCAGGCACTAGGAGGTGTTGCTCTTCTCCACACAGCTTTCCACACTCCGTCCTTACACTTCTTCCACAGGGACCAGGACTCTCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR CCA 90 bp GGTAGATGCTTCTCTCCACCTGCCTTCATGAGCTTTAGCTCCAGATaGCCTTGGGCAGCTGCCCTGACTTGCTCAGTCATCCTAGGAGCT +
Preference number: 1 (lower is better)
Translates to: GRCFSPPAFMSFSSR*PWAAALTCSVILGA
Trigger: AGCTCCTAGGATGACTGAGCAAGTCAGGGCAGCTGCCCAAGGCCATCTGGAGCTAAAGCTCATGAAGGCAGGTGGAGAGAAGCATCTACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR CCA 90 bp ATAACAACAACCAAACAGTTTGGGCTGGGCCAGCAAAGGGTGTTCTaGGAGTGCCCGGCTACCTCTGCACTCCATTTTGCCCCATGCCTG +
Preference number: 1 (lower is better)
Translates to: ITTTKQFGLGQQRVF*ECPATSALHFAPCL
Trigger: CAGGCATGGGGCAAAATGGAGTGCAGAGGTAGCCGGGCACTCCCAGAACACCCTTTGCTGGCCCAGCCCAAACTGTTTGGTTGTTGTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR GCA 90 bp AGAGGAGTGGGCGGGAGCAAGAAAGCGCTTTCAGCTTATCATGGATaGGAAGCTGAAAAACGTGGCCACCTGGCTTTCTCCACTGCCTGT +
Preference number: 1 (lower is better)
Translates to: RGVGGSKKALSAYHG*EAEKRGHLAFSTAC
Trigger: ACAGGCAGTGGAGAAAGCCAGGTGGCCACGTTTTTCAGCTTCGCATCCATGATAAGCTGAAAGCGCTTTCTTGCTCCCGCCCACTCCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR CCA 90 bp GGAAATCTAGCATTGACTCATGGTCAACTAGGCAGAGCAGAGGAGTaGGCGGGAGCAAGAAAGCGCTTTCAGCTTATCATGGATGCGAAG +
Preference number: 1 (lower is better)
Translates to: GNLALTHGQLGRAEE*AGARKRFQLIMDAK
Trigger: CTTCGCATCCATGATAAGCTGAAAGCGCTTTCTTGCTCCCGCCCACTCCTCTGCTCTGCCTAGTTGACCATGAGTCAATGCTAGATTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR TCA 90 bp AGCCACAGAGGACAGGCCTGGGGTACGTGGCTGCCTTTGACGAGATaGACAGGAATGTTTCACATTGGCATGTTTAATCCTAGACACTTC +
Preference number: 1 (lower is better)
Translates to: SHRGQAWGTWLPLTR*TGMFHIGMFNPRHF
Trigger: GAAGTGTCTAGGATTAAACATGCCAATGTGAAACATTCCTGTTCATCTCGTCAAAGGCAGCCACGTACCCCAGGCCTGTCCTCTGTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR TCA 90 bp CTAATAGACGCCTTTTCTTCTCAAGCTTTTGGGTTGAAATTTGCCTaGCTTGGGTCTAGCCCAGCCAGAGAGCAGACGCATGGAGGAACT +
Preference number: 1 (lower is better)
Translates to: LIDAFSSQAFGLKFA*LGSSPAREQTHGGT
Trigger: AGTTCCTCCATGCGTCTGCTCTCTGGCTGGGCTAGACCCAAGTCAGGCAAATTTCAACCCAAAAGCTTGAGAAGAAAAGGCGTCTATTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR-3UTR CCA 90 bp GGGGAGCTCCATGCAGCACCGGCCGCCCCTGGTGCCAACGAAGCCCAGGCCCTCACACCTCCTAGTGCCTaGAGGGACACAGAGCCCCCA +
Preference number: 2 (lower is better)
Translates to: GELHAAPAAPGANEAQALTPPSA*RDTEPP
Trigger: TGGGGGCTCTGTGTCCCTCCAGGCACTAGGAGGTGT...GAGGGCCTGGGCTTCGTTGGCACCAGGGGCGGCCGGTGCTGCATGGAGCTCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR-3UTR CCA 90 bp GGGGAGCTCCATGCAGCACCGGCCGCCCCTGGTGCCAACGAAGCCCAGGCCCTCAAGGATGGACAAGACTaGGCTGGTGAGGCTGCTGGG +
Preference number: 2 (lower is better)
Translates to: GELHAAPAAPGANEAQALKDGQD*AGEAAG
Trigger: CCCAGCAGCCTCACCAGCCCAGTCTTGTCCATCCTT...GAGGGCCTGGGCTTCGTTGGCACCAGGGGCGGCCGGTGCTGCATGGAGCTCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR-3UTR GCA 90 bp GCAAAGGGTGTTCTGGGAGTGCCCGGCTACCTCTGCACTCCATTTTGCCCCATGGGGTCAGGGCCTCAGTaGCAGGGAGGGGCCAGGGGC +
Preference number: 2 (lower is better)
Translates to: AKGVLGVPGYLCTPFCPMGSGPQ*QGGARG
Trigger: GCCCCTGGCCCCTCCCTGGCACTGAGGCCCTGACCC...CATGGGGCAAAATGGAGTGCAGAGGTAGCCGGGCACTCCCAGAACACCCTTTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR-3UTR GCA 90 bp GGCTGTCAGTGTGGGGAGGCTGCCCATCCATCTGCCGGCTACCCACGACTTTATCACGCCCCACCCGGATaGCTCCCCCTCTCCCAGGAC +
Preference number: 2 (lower is better)
Translates to: GCQCGEAAHPSAGYPRLYHAPPG*LPLSQD
Trigger: GTCCTGGGAGAGGGGGAGGCATCCGGGTGGGGCGTG...ATAAAGTCGTGGGTAGCCGGCAGATGGATGGGCAGCCTCCCCACACTGACAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR-3UTR GCA 90 bp GGCTGTCAGTGTGGGGAGGCTGCCCATCCATCTGCCGGCTACCCACGACTTTATGAGAGGGGAGCTCCATaGAGCACCGGCCGCCCCTGG +
Preference number: 2 (lower is better)
Translates to: GCQCGEAAHPSAGYPRLYERGAP*STGRPW
Trigger: CCAGGGGCGGCCGGTGCTGCATGGAGCTCCCCTCTC...ATAAAGTCGTGGGTAGCCGGCAGATGGATGGGCAGCCTCCCCACACTGACAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR-3UTR CCA 90 bp ACAGGCCTGCCTCTGGACGGTTACTGTGTACTCCCAGCTGAGGTGAGGGCTGGGCATGGGCGTGGCCCATaGTGTCCCGAGGTGGGGACG +
Preference number: 2 (lower is better)
Translates to: TGLPLDGYCVLPAEVRAGHGRGP*CPEVGT
Trigger: CGTCCCCACCTCGGGACACCATGGGCCACGCCCATG...CCCAGCCCTCACCTCAGCTGGGAGTACACAGTAACCGTCCAGAGGCAGGCCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR-3UTR GCA 90 bp TGGGCAGCTGCCCTGACTTGCTCAGTCATCCTAGGAGCTGACACGGCAGTGGCCCCTGGCTTTCTCCACTaGCTGTGGCCGGGAGCAGGG +
Preference number: 2 (lower is better)
Translates to: WAAALTCSVILGADTAVAPGFLH*LWPGAG
Trigger: CCCTGCTCCCGGCCACAGGCAGTGGAGAAAGCCAGG...GGCCACTGCCGTGTCAGCTCCTAGGATGACTGAGCAAGTCAGGGCAGCTGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR-3UTR CCA 90 bp TGTCATCCTCTGCCCACTCTCTCCAGGTGTATCCAGCCTAGGGGACAGCCAGGACATGGTGTCCCGAGGTaGGGACGGGGCAGGGGTGCC +
Preference number: 2 (lower is better)
Translates to: CHPLPTLSRCIQPRGQPGHGVPR*GRGRGA
Trigger: GGCACCCCTGCCCCGTCCCCACCTCGGGACACCATG...TCCTGGCTGTCCCCTAGGCTGGATACACCTGGAGAGAGTGGGCAGAGGATGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR-3UTR GCA 90 bp ACAGGCCTGCCTCTGGACGGTTACTGTGTACTCCCAGCTGAGGTGAGGGCTGGGGCAGGAGGCTGGCTCTaGAGGGCAGCCTGTGCTTCA +
Preference number: 2 (lower is better)
Translates to: TGLPLDGYCVLPAEVRAGAGGWL*RAACAS
Trigger: TGAAGCACAGGCTGCCCTGCAGAGCCAGCCTCCTGC...CCCAGCCCTCACCTCAGCTGGGAGTACACAGTAACCGTCCAGAGGCAGGCCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR-3UTR GCA 90 bp ACAGGCCTGCCTCTGGACGGTTACTGTGTACTCCCAGCTGAGGTGAGGGCTGGGCAGCTTTTGACCCTCTaGCACCCGGCCCCCAAGCTC +
Preference number: 2 (lower is better)
Translates to: TGLPLDGYCVLPAEVRAGQLLTL*HPAPKL
Trigger: GAGCTTGGGGGCCGGGTGGCAGAGGGTCAAAAGCTG...CCCAGCCCTCACCTCAGCTGGGAGTACACAGTAACCGTCCAGAGGCAGGCCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR-3UTR CCA 90 bp TCAGTGTGGGGAGGCTGCCCATCCATCTGCCGGCTACCCACGACTTTATTTTTAGGGGGAGGTGGAGGCTaGCGCCTTGGCCCCAGCAGG +
Preference number: 2 (lower is better)
Translates to: SVWGGCPSICRLPTTLFLGGGGG*RLGPSR
Trigger: CCTGCTGGGGCCAAGGCGCCAGCCTCCACCTCCCCC...TAAAAATAAAGTCGTGGGTAGCCGGCAGATGGATGGGCAGCCTCCCCACACTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR CAA 90 bp CCCCCTCTCCCAGGACCTTTCCTTCTTCTAGCACCATGGGAGCCCTaGTGGCATCTGTGTTCTCAGCCTCCCTCAGGTCTGGCTCCTCCC +
Preference number: 2 (lower is better)
Translates to: PPLPGPFLLLAPWEP*WHLCSQPPSGLAPP
Trigger: GGGAGGAGCCAGACCTGAGGGAGGCTGAGAACACAGATGCCACAAGGGCTCCCATGGTGCTAGAAGAAGGAAAGGTCCTGGGAGAGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR-3UTR GCA 90 bp GAGGGCAGTAGCAGCACCTTAGTGTCAAGCCTTGCCATGCTGAGACCTGTGCCCCACAGAGCCCCCATCTaGCGTGGAAGGCTCTGGGCA +
Preference number: 2 (lower is better)
Translates to: EGSSSTLVSSLAMLRPVPHRAPI*RGRLWA
Trigger: TGCCCAGAGCCTTCCACGGCAGATGGGGGCTCTGTG...GGGCACAGGTCTCAGCATGGCAAGGCTTGACACTAAGGTGCTGCTACTGCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR-3UTR GCA 90 bp GAGGGCAGTAGCAGCACCTTAGTGTCAAGCCTTGCCATGCTGAGACCTGTGCCCAGTGGCCCCCTGCTCTaGAGTGCAGAAGGTTGGGCC +
Preference number: 2 (lower is better)
Translates to: EGSSSTLVSSLAMLRPVPSGPLL*SAEGWA
Trigger: GGCCCAACCTTCTGCACTGCAGAGCAGGGGGCCACT...GGGCACAGGTCTCAGCATGGCAAGGCTTGACACTAAGGTGCTGCTACTGCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR-3UTR CCA 90 bp ACCCCAGAGACCCTCATTCAACAACACCAAGTTTACCCTCCGCCCAACCCAGGAGGGAGGCTGGGGGCCTaGAAAACATGGGCGTGGCCC +
Preference number: 2 (lower is better)
Translates to: TPETLIQQHQVYPPPNPGGRLGA*KTWAWP
Trigger: GGGCCACGCCCATGTTTTCCAGGCCCCCAGCCTCCC...TCCTGGGTTGGGCGGAGGGTAAACTTGGTGTTGTTGAATGAGGGTCTCTGGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR-3UTR CCA 90 bp GGCGCCTTGGCCCCAGCAGGTCGGATTCCGTGTGCTTTCAGGGAGAGAAAGATGAGTCGAGTGGGAGGCTaGGGGCCTGGAAAACATGGG +
Preference number: 2 (lower is better)
Translates to: GALAPAGRIPCAFRERKMSRVGG*GPGKHG
Trigger: CCCATGTTTTCCAGGCCCCCAGCCTCCCACTCGACT...CATCTTTCTCTCCCTGAAAGCACACGGAATCCGACCTGCTGGGGCCAAGGCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR CAA 90 bp AGCAAAGGGTGTTCTGGGAGTGCCCGGCTACCTCTGCACTCCATTTaGCCCCATGCCTGGGCCCCTACATCTCCTTCCCATCCGTGTTCC +
Preference number: 2 (lower is better)
Translates to: SKGCSGSARLPLHSI*PHAWAPTSPSHPCS
Trigger: GGAACACGGATGGGAAGGAGATGTAGGGGCCCAGGCATGGGGCAAAATGGAGTGCAGAGGTAGCCGGGCACTCCCAGAACACCCTTTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR-3UTR TCA 90 bp TCAGGAGGGCATCCTGACAGCCCCATTTGCAATAGCAAAGCCACACCGAGGAGCCCCTATAGTGTCCAGTaGGGGGCTGGCCCGTGTCTC +
Preference number: 2 (lower is better)
Translates to: SGGHPDSPICNSKATPRSPYSVQ*GAGPCL
Trigger: GAGACACGGGCCAGCCCCTCACTGGACACTATAGGG...GCTCCTCGGTGTGGCTTTGCTATTGCAAATGGGGCTGTCAGGATGCCCTCCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR-3UTR TCA 90 bp TCAGTGTGGGGAGGCTGCCCATCCATCTGCCGGCTACCCACGACTTTATTTTTACCTGCACGCAGCTTTTaGCCCTCTGCCACCCGGCCC +
Preference number: 2 (lower is better)
Translates to: SVWGGCPSICRLPTTLFLPARSF*PSATRP
Trigger: GGGCCGGGTGGCAGAGGGTCAAAAGCTGCGTGCAGG...TAAAAATAAAGTCGTGGGTAGCCGGCAGATGGATGGGCAGCCTCCCCACACTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR-3UTR CCA 90 bp TCAGTGTGGGGAGGCTGCCCATCCATCTGCCGGCTACCCACGACTTTATTTTTATGTCCAGTGAGGGGCTaGCCCGTGTCTCCCCTGGGG +
Preference number: 2 (lower is better)
Translates to: SVWGGCPSICRLPTTLFLCPVRG*PVSPLG
Trigger: CCCCAGGGGAGACACGGGCCAGCCCCTCACTGGACA...TAAAAATAAAGTCGTGGGTAGCCGGCAGATGGATGGGCAGCCTCCCCACACTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR-3UTR CCA 90 bp CGAAGTTGTGAGTCCTTCCATGCCGGGACACTGCTGAGCAGCCCCAGGGAGGGGCTTCTTCTAGCACCATaGGAGCCCTTGTGGCATCTG +
Preference number: 2 (lower is better)
Translates to: RSCESFHAGTLLSSPREGLLLAP*EPLWHL
Trigger: CAGATGCCACAAGGGCTCCCATGGTGCTAGAAGAAG...CCCCTCCCTGGGGCTGCTCAGCAGTGTCCCGGCATGGAAGGACTCACAACTTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR-3UTR TCA 90 bp TTCTTCCTTTCCCTGGCTAGATTTTGGGGGAGTCTGGGTCATTTCAGCGAACCTCAGCCACCGGCCTGGTaGCCAGGGGACCCCACTAGG +
Preference number: 2 (lower is better)
Translates to: FFLSLARFWGSLGHFSEPQPPAW*PGDPTR
Trigger: CCTAGTGGGGTCCCCTGGTCACCAGGCCGGTGGCTG...AGGTTCGCTGAAATGACCCAGACTCCCCCAAAATCTAGCCAGGGAAAGGAAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR-3UTR TCA 90 bp AAGGGAGAAGGTAGAAAAGGCGAGCGCTTCAATGCGGGGCGCTGCCTGCTGGAGTGTGTTCCGAAGTTGTaGGTCCTTCCATGCCGGGAC +
Preference number: 2 (lower is better)
Translates to: KGEGRKGERFNAGRCLLECVPKL*VLPCRD
Trigger: GTCCCGGCATGGAAGGACTCACAACTTCGGAACACA...CTCCAGCAGGCAGCGCCCCGCATTGAAGCGCTCGCCTTTTCTACCTTCTCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR-3UTR GCA 90 bp TGGGCAGCTGCCCTGACTTGCTCAGTCATCCTAGGAGCTGACACGGCAGTGGCCTCCTCTAGCAAAGCCTaGACGCAGCTTTTGACCCTC +
Preference number: 2 (lower is better)
Translates to: WAAALTCSVILGADTAVASSSKA*TQLLTL
Trigger: GAGGGTCAAAAGCTGCGTGCAGGCTTTGCTAGAGGA...GGCCACTGCCGTGTCAGCTCCTAGGATGACTGAGCAAGTCAGGGCAGCTGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR-3UTR CCA 90 bp ACCCCAGAGACCCTCATTCAACAACACCAAGTTTACCCTCCGCCCAACCCAGGAGGGGCCTGGAAAACATaGGCGTGGCCCATGGTGTCC +
Preference number: 2 (lower is better)
Translates to: TPETLIQQHQVYPPPNPGGAWKT*AWPMVS
Trigger: GGACACCATGGGCCACGCCCATGTTTTCCAGGCCCC...TCCTGGGTTGGGCGGAGGGTAAACTTGGTGTTGTTGAATGAGGGTCTCTGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR-3UTR CCA 90 bp TGGGCAGCTGCCCTGACTTGCTCAGTCATCCTAGGAGCTGACACGGCAGTGGCCAAAAACGTGGCCACCTaGCTTTCTCCACTGCCTGTG +
Preference number: 2 (lower is better)
Translates to: WAAALTCSVILGADTAVAKNVAT*LSPLPV
Trigger: CACAGGCAGTGGAGAAAGCCAGGTGGCCACGTTTTT...GGCCACTGCCGTGTCAGCTCCTAGGATGACTGAGCAAGTCAGGGCAGCTGCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR-3UTR CCA 90 bp AGCAGACGCATGGAGGAACTGAGTGCCGGGGGCCACTGCGGAAGAGCCCCCTTAGTGTGGAAAGCTGTGTaGAGAAGAGCAACACCTCCT +
Preference number: 2 (lower is better)
Translates to: SRRMEELSAGGHCGRAPLVWKAV*RRATPP
Trigger: AGGAGGTGTTGCTCTTCTCCACACAGCTTTCCACAC...TAAGGGGGCTCTTCCGCAGTGGCCCCCGGCACTCAGTTCCTCCATGCGTCTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR-3UTR TCA 90 bp TGGGCAGCTGCCCTGACTTGCTCAGTCATCCTAGGAGCTGACACGGCAGTGGCCGTTCACAAAGAGGTCTaGCTCATTAAGGGAGGCCAC +
Preference number: 2 (lower is better)
Translates to: WAAALTCSVILGADTAVAVHKEV*LIKGGH
Trigger: GTGGCCTCCCTTAATGAGTCAGACCTCTTTGTGAAC...GGCCACTGCCGTGTCAGCTCCTAGGATGACTGAGCAAGTCAGGGCAGCTGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR-3UTR GCA 90 bp GCAAAGGGTGTTCTGGGAGTGCCCGGCTACCTCTGCACTCCATTTTGCCCCATGGATGGAGAACAAAGCTaGCCAGACCTCCCCGCTGTA +
Preference number: 2 (lower is better)
Translates to: AKGVLGVPGYLCTPFCPMDGEQS*PDLPAV
Trigger: TACAGCGGGGAGGTCTGGGCAGCTTTGTTCTCCATC...CATGGGGCAAAATGGAGTGCAGAGGTAGCCGGGCACTCCCAGAACACCCTTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR-3UTR GCA 90 bp CAGCTAGGCCTGTTTGCCTTTGCACTGGACAGTAAGGGCCATGAAACAGACCAGAGTGCCGGGGGCCACTaGGGAAGAGCCCCCTTAAAG +
Preference number: 2 (lower is better)
Translates to: QLGLFAFALDSKGHETDQSAGGH*GRAPLK
Trigger: CTTTAAGGGGGCTCTTCCGCAGTGGCCCCCGGCACT...CTGGTCTGTTTCATGGCCCTTACTGTCCAGTGCAAAGGCAAACAGGCCTAGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR-3UTR CCA 90 bp AGCAGACGCATGGAGGAACTGAGTGCCGGGGGCCACTGCGGAAGAGCCCCCTTAAGTTCTTCCTTTCCCTaGCTAGATTTTGGGGGAGTC +
Preference number: 2 (lower is better)
Translates to: SRRMEELSAGGHCGRAPLSSSFP*LDFGGV
Trigger: GACTCCCCCAAAATCTAGCCAGGGAAAGGAAGAACT...TAAGGGGGCTCTTCCGCAGTGGCCCCCGGCACTCAGTTCCTCCATGCGTCTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR CAA 90 bp AAGACTGGGCTGGTGAGGCTGCTGGGTCTGCATGGAAATCTAGCATaGACTCATGGTCAACTAGGCAGAGCAGAGGAGTGGGCGGGAGCA +
Preference number: 2 (lower is better)
Translates to: KTGLVRLLGLHGNLA*THGQLGRAEEWAGA
Trigger: TGCTCCCGCCCACTCCTCTGCTCTGCCTAGTTGACCATGAGTCAATGCTAGATTTCCATGCAGACCCAGCAGCCTCACCAGCCCAGTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR-3UTR TCA 90 bp CAGCTAGGCCTGTTTGCCTTTGCACTGGACAGTAAGGGCCATGAAACAGACCAGCTCCTGGAGGGAACCTaGCTGGGCTCTGGATGGAGA +
Preference number: 2 (lower is better)
Translates to: QLGLFAFALDSKGHETDQLLEGT*LGSGWR
Trigger: TCTCCATCCAGAGCCCAGTCAGGTTCCCTCCAGGAG...CTGGTCTGTTTCATGGCCCTTACTGTCCAGTGCAAAGGCAAACAGGCCTAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR-3UTR GCA 90 bp AGCAGACGCATGGAGGAACTGAGTGCCGGGGGCCACTGCGGAAGAGCCCCCTTATCAGCTTATCATGGATaGGAAGCTGAAAAACGTGGC +
Preference number: 2 (lower is better)
Translates to: SRRMEELSAGGHCGRAPLSAYHG*EAEKRG
Trigger: GCCACGTTTTTCAGCTTCGCATCCATGATAAGCTGA...TAAGGGGGCTCTTCCGCAGTGGCCCCCGGCACTCAGTTCCTCCATGCGTCTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR-3UTR CCA 90 bp AGCTCCAGATGGCCTTGGGCAGCTGCCCTGACTTGCTCAGTCATCCTAGGAGCTAACCTGACTGGGCTCTaGATGGAGAACAAAGCTGCC +
Preference number: 2 (lower is better)
Translates to: SSRWPWAAALTCSVILGANLTGL*MENKAA
Trigger: GGCAGCTTTGTTCTCCATCCAGAGCCCAGTCAGGTT...AGCTCCTAGGATGACTGAGCAAGTCAGGGCAGCTGCCCAAGGCCATCTGGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR-3UTR CCA 90 bp TCAGTGTGGGGAGGCTGCCCATCCATCTGCCGGCTACCCACGACTTTATTTTTATGGAAAACATGGGCGTaGCCCATGGTGTCCCGAGGT +
Preference number: 2 (lower is better)
Translates to: SVWGGCPSICRLPTTLFLWKTWA*PMVSRG
Trigger: ACCTCGGGACACCATGGGCCACGCCCATGTTTTCCA...TAAAAATAAAGTCGTGGGTAGCCGGCAGATGGATGGGCAGCCTCCCCACACTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR-3UTR CCA 90 bp TGGGCAGCTGCCCTGACTTGCTCAGTCATCCTAGGAGCTGACACGGCAGTGGCCTCTAGCATTGACTCATaGTCAACTAGGCAGAGCAGA +
Preference number: 2 (lower is better)
Translates to: WAAALTCSVILGADTAVASSIDS*STRQSR
Trigger: TCTGCTCTGCCTAGTTGACCATGAGTCAATGCTAGA...GGCCACTGCCGTGTCAGCTCCTAGGATGACTGAGCAAGTCAGGGCAGCTGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR-3UTR CCA 90 bp TCAGTGTGGGGAGGCTGCCCATCCATCTGCCGGCTACCCACGACTTTATTTTTAAGCCTCCCTCAGGTCTaGCTCCTCCCCTATAGTGTC +
Preference number: 2 (lower is better)
Translates to: SVWGGCPSICRLPTTLFLSLPQV*LLPYSV
Trigger: GACACTATAGGGGAGGAGCCAGACCTGAGGGAGGCT...TAAAAATAAAGTCGTGGGTAGCCGGCAGATGGATGGGCAGCCTCCCCACACTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR-3UTR TCA 90 bp CAGCTAGGCCTGTTTGCCTTTGCACTGGACAGTAAGGGCCATGAAACAGACCAGTCATGGATGCGAAGCTaGAAAACGTGGCCACCTGGC +
Preference number: 2 (lower is better)
Translates to: QLGLFAFALDSKGHETDQSWMRS*KTWPPG
Trigger: GCCAGGTGGCCACGTTTTTCAGCTTCGCATCCATGA...CTGGTCTGTTTCATGGCCCTTACTGTCCAGTGCAAAGGCAAACAGGCCTAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR-3UTR TCA 90 bp GATGAACAGGAATGTTTCACATTGGCATGTTTAATCCTAGACACTTCCTGGGTGATGCCGGGACACTGCTaGGCAGCCCCAGGGAGGGGC +
Preference number: 2 (lower is better)
Translates to: DEQECFTLACLILDTSWVMPGHC*AAPGRG
Trigger: GCCCCTCCCTGGGGCTGCTCAGCAGTGTCCCGGCAT...CACCCAGGAAGTGTCTAGGATTAAACATGCCAATGTGAAACATTCCTGTTCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR-3UTR TCA 90 bp GGCTGTCAGTGTGGGGAGGCTGCCCATCCATCTGCCGGCTACCCACGACTTTATCTCAAGCTTTTGGGTTaGAATTTGCCTGACTTGGGT +
Preference number: 2 (lower is better)
Translates to: GCQCGEAAHPSAGYPRLYLKLLG*NLPDLG
Trigger: ACCCAAGTCAGGCAAATTTCAACCCAAAAGCTTGAG...ATAAAGTCGTGGGTAGCCGGCAGATGGATGGGCAGCCTCCCCACACTGACAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR-3UTR GCA 90 bp AGCTCCAGATGGCCTTGGGCAGCTGCCCTGACTTGCTCAGTCATCCTAGGAGCTAGGTCGGATTCCGTGTaGTTTCAGGGAGAGAAAGAT +
Preference number: 2 (lower is better)
Translates to: SSRWPWAAALTCSVILGARSDSV*FQGEKD
Trigger: ATCTTTCTCTCCCTGAAAGCACACGGAATCCGACCT...AGCTCCTAGGATGACTGAGCAAGTCAGGGCAGCTGCCCAAGGCCATCTGGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR-3UTR GCA 90 bp ACCCCAGAGACCCTCATTCAACAACACCAAGTTTACCCTCCGCCCAACCCAGGACCTGACAGCCCCATTTaGAATAGCAAAGCCACACCG +
Preference number: 2 (lower is better)
Translates to: TPETLIQQHQVYPPPNPGPDSPI*NSKATP
Trigger: CGGTGTGGCTTTGCTATTGCAAATGGGGCTGTCAGG...TCCTGGGTTGGGCGGAGGGTAAACTTGGTGTTGTTGAATGAGGGTCTCTGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR-3UTR GCA 90 bp TCAGTGTGGGGAGGCTGCCCATCCATCTGCCGGCTACCCACGACTTTATTTTTAGCAGCTGCCCTGACTTaGTCAGTCATCCTAGGAGCT +
Preference number: 2 (lower is better)
Translates to: SVWGGCPSICRLPTTLFLAAALT*SVILGA
Trigger: AGCTCCTAGGATGACTGAGCAAGTCAGGGCAGCTGC...TAAAAATAAAGTCGTGGGTAGCCGGCAGATGGATGGGCAGCCTCCCCACACTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR-3UTR CCA 90 bp AGCTCCAGATGGCCTTGGGCAGCTGCCCTGACTTGCTCAGTCATCCTAGGAGCTGTCCTGATTCTCTCATaGGTGAGAAAGACCCAAGGT +
Preference number: 2 (lower is better)
Translates to: SSRWPWAAALTCSVILGAVLILS*VRKTQG
Trigger: ACCTTGGGTCTTTCTCACCCATGAGAGAATCAGGAC...AGCTCCTAGGATGACTGAGCAAGTCAGGGCAGCTGCCCAAGGCCATCTGGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR-3UTR CCA 90 bp CAGCTAGGCCTGTTTGCCTTTGCACTGGACAGTAAGGGCCATGAAACAGACCAGGAGTCCTGGTCCCTGTaGAAGAAGTGTAAGGACGGA +
Preference number: 2 (lower is better)
Translates to: QLGLFAFALDSKGHETDQESWSL*KKCKDG
Trigger: TCCGTCCTTACACTTCTTCCACAGGGACCAGGACTC...CTGGTCTGTTTCATGGCCCTTACTGTCCAGTGCAAAGGCAAACAGGCCTAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR-3UTR CCA 90 bp TTCTTCCTTTCCCTGGCTAGATTTTGGGGGAGTCTGGGTCATTTCAGCGAACCTTGGAGGCAGGAAGCCTaGTTTCAGGAGGGCATCCTG +
Preference number: 2 (lower is better)
Translates to: FFLSLARFWGSLGHFSEPWRQEA*FQEGIL
Trigger: CAGGATGCCCTCCTGAAACCAGGCTTCCTGCCTCCA...AGGTTCGCTGAAATGACCCAGACTCCCCCAAAATCTAGCCAGGGAAAGGAAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR-3UTR CCA 90 bp TTCTTCCTTTCCCTGGCTAGATTTTGGGGGAGTCTGGGTCATTTCAGCGAACCTGAGGGCAGAGAGTCCTaGTCCCTGTGGAAGAAGTGT +
Preference number: 2 (lower is better)
Translates to: FFLSLARFWGSLGHFSEPEGRES*SLWKKC
Trigger: ACACTTCTTCCACAGGGACCAGGACTCTCTGCCCTC...AGGTTCGCTGAAATGACCCAGACTCCCCCAAAATCTAGCCAGGGAAAGGAAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR-3UTR CCA 90 bp CAGCTAGGCCTGTTTGCCTTTGCACTGGACAGTAAGGGCCATGAAACAGACCAGGTGCTATTTCAGCCTTaGAGACAAGCCTCTCTGTGT +
Preference number: 2 (lower is better)
Translates to: QLGLFAFALDSKGHETDQVLFQP*RQASLC
Trigger: ACACAGAGAGGCTTGTCTCCAAGGCTGAAATAGCAC...CTGGTCTGTTTCATGGCCCTTACTGTCCAGTGCAAAGGCAAACAGGCCTAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR-3UTR CCA 90 bp GATGAACAGGAATGTTTCACATTGGCATGTTTAATCCTAGACACTTCCTGGGTGCAGAGCCCCGCTTCCTaGAGGCAGGAAGCCTGGTTT +
Preference number: 2 (lower is better)
Translates to: DEQECFTLACLILDTSWVQSPAS*RQEAWF
Trigger: AAACCAGGCTTCCTGCCTCCAGGAAGCGGGGCTCTG...CACCCAGGAAGTGTCTAGGATTAAACATGCCAATGTGAAACATTCCTGTTCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR-3UTR CCA 90 bp TTCTTCCTTTCCCTGGCTAGATTTTGGGGGAGTCTGGGTCATTTCAGCGAACCTTGTAAGGACGGAGTGTaGAAAGCTGTGTGGAGAAGA +
Preference number: 2 (lower is better)
Translates to: FFLSLARFWGSLGHFSEPCKDGV*KAVWRR
Trigger: TCTTCTCCACACAGCTTTCCACACTCCGTCCTTACA...AGGTTCGCTGAAATGACCCAGACTCCCCCAAAATCTAGCCAGGGAAAGGAAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR-3UTR CCA 90 bp ACTCCAAATCCTCAAATATTTGAAACACTTAAAGCCAAGCCTCCAAGAACATTTTGGAGGCTGGCGCCTTaGCCCCAGCAGGTCGGATTC +
Preference number: 2 (lower is better)
Translates to: TPNPQIFETLKAKPPRTFWRLAP*PQQVGF
Trigger: GAATCCGACCTGCTGGGGCCAAGGCGCCAGCCTCCA...AAATGTTCTTGGAGGCTTGGCTTTAAGTGTTTCAAATATTTGAGGATTTGGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR-3UTR CCA 90 bp GATGAACAGGAATGTTTCACATTGGCATGTTTAATCCTAGACACTTCCTGGGTGCCATGGGAGCCCTTGTaGCATCTGTGTTCTCAGCCT +
Preference number: 2 (lower is better)
Translates to: DEQECFTLACLILDTSWVPWEPL*HLCSQP
Trigger: AGGCTGAGAACACAGATGCCACAAGGGCTCCCATGG...CACCCAGGAAGTGTCTAGGATTAAACATGCCAATGTGAAACATTCCTGTTCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR CAA 90 bp ATGTTTCACATTGGCATGTTTAATCCTAGACACTTCCTGGGTGTGTaGGGACAGGCAGCCATAGCCACAGAGTCTTCTAATAGACGCCTT +
Preference number: 2 (lower is better)
Translates to: MFHIGMFNPRHFLGV*GQAAIATESSNRRL
Trigger: AAGGCGTCTATTAGAAGACTCTGTGGCTATGGCTGCCTGTCCCAACACACCCAGGAAGTGTCTAGGATTAAACATGCCAATGTGAAACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR-3UTR TCA 90 bp ACTCCAAATCCTCAAATATTTGAAACACTTAAAGCCAAGCCTCCAAGAACATTTCTGTGTACTCCCAGCTaGGGTGAGGGCTGGGGCTCA +
Preference number: 2 (lower is better)
Translates to: TPNPQIFETLKAKPPRTFLCTPS*GEGWGS
Trigger: TGAGCCCCAGCCCTCACCTCAGCTGGGAGTACACAG...AAATGTTCTTGGAGGCTTGGCTTTAAGTGTTTCAAATATTTGAGGATTTGGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR-3UTR CCA 90 bp ACTCCAAATCCTCAAATATTTGAAACACTTAAAGCCAAGCCTCCAAGAACATTTGGCCCGTGTCTCCCCTaGGGACTGGCATTGCTAGAT +
Preference number: 2 (lower is better)
Translates to: TPNPQIFETLKAKPPRTFGPCLP*GLALLD
Trigger: ATCTAGCAATGCCAGTCCCCAGGGGAGACACGGGCC...AAATGTTCTTGGAGGCTTGGCTTTAAGTGTTTCAAATATTTGAGGATTTGGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR-3UTR CCA 90 bp ACTCCAAATCCTCAAATATTTGAAACACTTAAAGCCAAGCCTCCAAGAACATTTGCTGCTGGGTCTGCATaGAAATCTAGCATTGACTCA +
Preference number: 2 (lower is better)
Translates to: TPNPQIFETLKAKPPRTFAAGSA*KSSIDS
Trigger: TGAGTCAATGCTAGATTTCCATGCAGACCCAGCAGC...AAATGTTCTTGGAGGCTTGGCTTTAAGTGTTTCAAATATTTGAGGATTTGGAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR CCA 72 bp TTGGAGAGGGGAGCTCCATGCAGCACCGGCCGCCCCTaGTGCCAACGAAGCCCAGGCCCTCACACCCTGGGT +
Preference number: 3 (lower is better)
Translates to: LERGAPCSTGRP*CQRSPGPHTLG
Trigger: ACCCAGGGTGTGAGGGCCTGGGCTTCGTTGGCACCAGGGGCGGCCGGTGCTGCATGGAGCTCCCCTCTCCAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR GCA 72 bp AGAACAAAGCTGCCCAGACCTCCCCGCTGTACCAGATaGCAGGCAGGCCGGAGAGCGGGAGGACTGCCCGGG +
Preference number: 3 (lower is better)
Translates to: RTKLPRPPRCTR*QAGRRAGGLPG
Trigger: CCCGGGCAGTCCTCCCGCTCTCCGGCCTGCCTGGCATCTGGTACAGCGGGGAGGTCTGGGCAGCTTTGTTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR GCA 72 bp GAGGCCGAGCATGGCCACACGTCCTCTAGCAAAGCCTaGACGCAGCTTTTGACCCTCTGCCACCCGGCCCCC +
Preference number: 3 (lower is better)
Translates to: EAEHGHTSSSKA*TQLLTLCHPAP
Trigger: GGGGGCCGGGTGGCAGAGGGTCAAAAGCTGCGTGCAGGCTTTGCTAGAGGACGTGTGGCCATGCTCGGCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR GCA 72 bp GGCTGGCGCCTTGGCCCCAGCAGGTCGGATTCCGTGTaGTTTCAGGGAGAGAAAGATGGGAGGGCAGGAGGC +
Preference number: 3 (lower is better)
Translates to: GWRLGPSRSDSV*FQGEKDGRAGG
Trigger: GCCTCCTGCCCTCCCATCTTTCTCTCCCTGAAAGCACACGGAATCCGACCTGCTGGGGCCAAGGCGCCAGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR GCA 72 bp GTGAATGCCCATGAGGCATTGGAGAGGGGAGCTCCATaGAGCACCGGCCGCCCCTGGTGCCAACGAAGCCCA +
Preference number: 3 (lower is better)
Translates to: VNAHEALERGAP*STGRPWCQRSP
Trigger: TGGGCTTCGTTGGCACCAGGGGCGGCCGGTGCTGCATGGAGCTCCCCTCTCCAATGCCTCATGGGCATTCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR-3UTR CAA 90 bp ACACAGAGCCCCCATCTGCCGTGGAAGGCTCTGGGCAGCGATGACACTGACAGAGCCTGCACGCAGCTTTaGACCCTCTGCCACCCGGCC +
Preference number: 3 (lower is better)
Translates to: TQSPHLPWKALGSDDTDRACTQL*TLCHPA
Trigger: GGCCGGGTGGCAGAGGGTCAAAAGCTGCGTGCAGGC...TCTGTCAGTGTCATCGCTGCCCAGAGCCTTCCACGGCAGATGGGGGCTCTGTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR GCA 72 bp AGCCCAGCCAGAGAGCAGACGCATGGAGGAACTGAGTaGCGGGGGCCACTGCGGAAGAGCCCCCTTAAAGCT +
Preference number: 3 (lower is better)
Translates to: SPAREQTHGGTE*RGPLRKSPLKA
Trigger: AGCTTTAAGGGGGCTCTTCCGCAGTGGCCCCCGGCACTCAGTTCCTCCATGCGTCTGCTCTCTGGCTGGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR-3UTR CAA 90 bp GGCGCCTTGGCCCCAGCAGGTCGGATTCCGTGTGCTTTCAGGGAGAGAAAGATGCACGGGGCCTCAGACTaGGGGCGGCTGAAAGTGCTG +
Preference number: 3 (lower is better)
Translates to: GALAPAGRIPCAFRERKMHGASD*GRLKVL
Trigger: CAGCACTTTCAGCCGCCCCAAGTCTGAGGCCCCGTG...CATCTTTCTCTCCCTGAAAGCACACGGAATCCGACCTGCTGGGGCCAAGGCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR-3UTR CAA 90 bp TGGGCAGCTGCCCTGACTTGCTCAGTCATCCTAGGAGCTGACACGGCAGTGGCCCCCTGGGGACTGGCATaGCTAGATGGCAGCAGGGGT +
Preference number: 3 (lower is better)
Translates to: WAAALTCSVILGADTAVAPWGLA*LDGSRG
Trigger: ACCCCTGCTGCCATCTAGCAATGCCAGTCCCCAGGG...GGCCACTGCCGTGTCAGCTCCTAGGATGACTGAGCAAGTCAGGGCAGCTGCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR TCA 72 bp GGCAGCTGCCCTGACTTGCTCAGTCATCCTAGGAGCTaGCACGGCAGTGGCCCCCTGCTCTGCAGTGCAGAA +
Preference number: 3 (lower is better)
Translates to: GSCPDLLSHPRS*HGSGPLLCSAE
Trigger: TTCTGCACTGCAGAGCAGGGGGCCACTGCCGTGTCAGCTCCTAGGATGACTGAGCAAGTCAGGGCAGCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR GCA 72 bp TCAGTCATCCTAGGAGCTGACACGGCAGTGGCCCCCTaGTCTGCAGTGCAGAAGGTTGGGCCTAGCCACCTG +
Preference number: 3 (lower is better)
Translates to: SVILGADTAVAP*SAVQKVGPSHL
Trigger: CAGGTGGCTAGGCCCAACCTTCTGCACTGCAGAGCAGGGGGCCACTGCCGTGTCAGCTCCTAGGATGACTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR CCA 72 bp GAGGGACACAGAGCCCCCATCTGCCGTGGAAGGCTCTaGGCAGCGATGACACTGACAGATATGGCAGGGAGG +
Preference number: 3 (lower is better)
Translates to: EGHRAPICRGRL*AAMTLTDMAGR
Trigger: CCTCCCTGCCATATCTGTCAGTGTCATCGCTGCCCAGAGCCTTCCACGGCAGATGGGGGCTCTGTGTCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR CCA 72 bp CAGGCACAGAGCCCCGCTTCCTGGAGGCAGGAAGCCTaGTTTCAGGAGGGCATCCTGACAGCCCCATTTGCA +
Preference number: 3 (lower is better)
Translates to: QAQSPASWRQEA*FQEGILTAPFA
Trigger: TGCAAATGGGGCTGTCAGGATGCCCTCCTGAAACCAGGCTTCCTGCCTCCAGGAAGCGGGGCTCTGTGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR TCA 72 bp AGAGACGAGCCCCTCCGCATCCTCCTGGAGGGAACCTaGCTGGGCTCTGGATGGAGAACAAAGCTGCCCAGA +
Preference number: 3 (lower is better)
Translates to: RDEPLRILLEGT*LGSGWRTKLPR
Trigger: TCTGGGCAGCTTTGTTCTCCATCCAGAGCCCAGTCAGGTTCCCTCCAGGAGGATGCGGAGGGGCTCGTCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR GCA 72 bp AGGGAACCTGACTGGGCTCTGGATGGAGAACAAAGCTaGCCAGACCTCCCCGCTGTACCAGATGCCAGGCAG +
Preference number: 3 (lower is better)
Translates to: REPDWALDGEQS*PDLPAVPDARQ
Trigger: CTGCCTGGCATCTGGTACAGCGGGGAGGTCTGGGCAGCTTTGTTCTCCATCCAGAGCCCAGTCAGGTTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR CCA 72 bp TTCCTAAGAGGAAAGTCGAGTGGGAGGCTGGGGGCCTaGAAAACATGGGCGTGGCCCATGGTGTCCCGAGGT +
Preference number: 3 (lower is better)
Translates to: FLRGKSSGRLGA*KTWAWPMVSRG
Trigger: ACCTCGGGACACCATGGGCCACGCCCATGTTTTCCAGGCCCCCAGCCTCCCACTCGACTTTCCTCTTAGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR CCA 72 bp GGGGACCCCACTAGGAGCGGGAAGGATGGACAAGACTaGGCTGGTGAGGCTGCTGGGTCTGCATGGAAATCT +
Preference number: 3 (lower is better)
Translates to: GDPTRSGKDGQD*AGEAAGSAWKS
Trigger: AGATTTCCATGCAGACCCAGCAGCCTCACCAGCCCAGTCTTGTCCATCCTTCCCGCTCCTAGTGGGGTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR TCA 72 bp CGGCCCCCAAGCTCTAGCTTATGTGTTCCGAAGTTGTaGGTCCTTCCATGCCGGGACACTGCTGAGCAGCCC +
Preference number: 3 (lower is better)
Translates to: RPPSSSLCVPKL*VLPCRDTAEQP
Trigger: GGGCTGCTCAGCAGTGTCCCGGCATGGAAGGACTCACAACTTCGGAACACATAAGCTAGAGCTTGGGGGCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR GCA 72 bp AGCCTGGTTTCAGGAGGGCATCCTGACAGCCCCATTTaGAATAGCAAAGCCACACCGAGGAGCCCAGGCCAG +
Preference number: 3 (lower is better)
Translates to: SLVSGGHPDSPI*NSKATPRSPGQ
Trigger: CTGGCCTGGGCTCCTCGGTGTGGCTTTGCTATTGCAAATGGGGCTGTCAGGATGCCCTCCTGAAACCAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR GCA 72 bp GCAGGGTACGTAGTTTTCATGGAAGCGTCCCTCGTCTaGCCAGCCGAAATGACAGGAGATGGGGCACGGAGC +
Preference number: 3 (lower is better)
Translates to: AGYVVFMEASLV*PAEMTGDGARS
Trigger: GCTCCGTGCCCCATCTCCTGTCATTTCGGCTGGGCAGACGAGGGACGCTTCCATGAAAACTACGTACCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR CCA 72 bp CCCCCTCTCCCAGGACCTTTCCTTCTTCTAGCACCATaGGAGCCCTTGTGGCATCTGTGTTCTCAGCCTCCC +
Preference number: 3 (lower is better)
Translates to: PPLPGPFLLLAP*EPLWHLCSQPP
Trigger: GGGAGGCTGAGAACACAGATGCCACAAGGGCTCCCATGGTGCTAGAAGAAGGAAAGGTCCTGGGAGAGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR CCA 72 bp AAAGCTGTGTGGAGAAGAGCAACACCTCCTAGTGCCTaGAGGGACACAGAGCCCCCATCTGCCGTGGAAGGC +
Preference number: 3 (lower is better)
Translates to: KAVWRRATPPSA*RDTEPPSAVEG
Trigger: GCCTTCCACGGCAGATGGGGGCTCTGTGTCCCTCCAGGCACTAGGAGGTGTTGCTCTTCTCCACACAGCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR-3UTR CAA 90 bp AGCTCCAGATGGCCTTGGGCAGCTGCCCTGACTTGCTCAGTCATCCTAGGAGCTTTTGTCCTGATTCCCTaGCTCTCCCTCCTGGCCCAC +
Preference number: 3 (lower is better)
Translates to: SSRWPWAAALTCSVILGAFVLIP*LSLLAH
Trigger: GTGGGCCAGGAGGGAGAGCAAGGGAATCAGGACAAA...AGCTCCTAGGATGACTGAGCAAGTCAGGGCAGCTGCCCAAGGCCATCTGGAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR CCA 72 bp CTTATCATGGATGCGAAGCTGAAAAACGTGGCCACCTaGCTTTCTCCACTGCCTGTGGCCGGGAGCAGGGGT +
Preference number: 3 (lower is better)
Translates to: LIMDAKLKNVAT*LSPLPVAGSRG
Trigger: ACCCCTGCTCCCGGCCACAGGCAGTGGAGAAAGCCAGGTGGCCACGTTTTTCAGCTTCGCATCCATGATAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR CCA 72 bp GCAGGCTGGAGAGAGGGCAGAGAGTCCTGGTCCCTGTaGAAGAAGTGTAAGGACGGAGTGTGGAAAGCTGTG +
Preference number: 3 (lower is better)
Translates to: AGWREGRESWSL*KKCKDGVWKAV
Trigger: CACAGCTTTCCACACTCCGTCCTTACACTTCTTCCACAGGGACCAGGACTCTCTGCCCTCTCTCCAGCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR CCA 72 bp GGGCAAGTACAGGTCAGGGCAGTCATGTCTCCACTCTaGGCCAGGGTCTTCTCTGTTGTGAAGGGACTGGAC +
Preference number: 3 (lower is better)
Translates to: GQVQVRAVMSPL*ARVFSVVKGLD
Trigger: GTCCAGTCCCTTCACAACAGAGAAGACCCTGGCCCAGAGTGGAGACATGACTGCCCTGACCTGTACTTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR CCA 72 bp AGAAGGTTGGGCCTAGCCACCTGTCTTGGAAGGGACTaGGCCCCAAGGTTCTCTTCTGGAGAACTGAGCTGC +
Preference number: 3 (lower is better)
Translates to: RRLGLATCLGRD*APRFSSGELSC
Trigger: GCAGCTCAGTTCTCCAGAAGAGAACCTTGGGGCCCAGTCCCTTCCAAGACAGGTGGCTAGGCCCAACCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR CCA 72 bp ACCAAACAGTTTGGGCTGGGCCAGCAAAGGGTGTTCTaGGAGTGCCCGGCTACCTCTGCACTCCATTTTGCC +
Preference number: 3 (lower is better)
Translates to: TKQFGLGQQRVF*ECPATSALHFA
Trigger: GGCAAAATGGAGTGCAGAGGTAGCCGGGCACTCCCAGAACACCCTTTGCTGGCCCAGCCCAAACTGTTTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR TCA 72 bp TGGGCCCCAAGGTTCTCTTCTGGAGAACTGAGCTGCTaGGTGAATGCCCATGAGGCATTGGAGAGGGGAGCT +
Preference number: 3 (lower is better)
Translates to: WAPRFSSGELSC*VNAHEALERGA
Trigger: AGCTCCCCTCTCCAATGCCTCATGGGCATTCACTCAGCAGCTCAGTTCTCCAGAAGAGAACCTTGGGGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR CCA 72 bp GCTGCTGGGTCTGCATGGAAATCTAGCATTGACTCATaGTCAACTAGGCAGAGCAGAGGAGTGGGCGGGAGC +
Preference number: 3 (lower is better)
Translates to: AAGSAWKSSIDS*STRQSRGVGGS
Trigger: GCTCCCGCCCACTCCTCTGCTCTGCCTAGTTGACCATGAGTCAATGCTAGATTTCCATGCAGACCCAGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR CCA 72 bp TTCTCTCCACCTGCCTTCATGAGCTTTAGCTCCAGATaGCCTTGGGCAGCTGCCCTGACTTGCTCAGTCATC +
Preference number: 3 (lower is better)
Translates to: FSPPAFMSFSSR*PWAAALTCSVI
Trigger: GATGACTGAGCAAGTCAGGGCAGCTGCCCAAGGCCATCTGGAGCTAAAGCTCATGAAGGCAGGTGGAGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR GCA 72 bp GGCGGGAGCAAGAAAGCGCTTTCAGCTTATCATGGATaGGAAGCTGAAAAACGTGGCCACCTGGCTTTCTCC +
Preference number: 3 (lower is better)
Translates to: GGSKKALSAYHG*EAEKRGHLAFS
Trigger: GGAGAAAGCCAGGTGGCCACGTTTTTCAGCTTCGCATCCATGATAAGCTGAAAGCGCTTTCTTGCTCCCGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR CCA 72 bp GGACAAGACTGGGCTGGTGAGGCTGCTGGGTCTGCATaGAAATCTAGCATTGACTCATGGTCAACTAGGCAG +
Preference number: 3 (lower is better)
Translates to: GQDWAGEAAGSA*KSSIDSWSTRQ
Trigger: CTGCCTAGTTGACCATGAGTCAATGCTAGATTTCCATGCAGACCCAGCAGCCTCACCAGCCCAGTCTTGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR CCA 72 bp TGGAAGAAGTGTAAGGACGGAGTGTGGAAAGCTGTGTaGAGAAGAGCAACACCTCCTAGTGCCTGGAGGGAC +
Preference number: 3 (lower is better)
Translates to: WKKCKDGVWKAV*RRATPPSAWRD
Trigger: GTCCCTCCAGGCACTAGGAGGTGTTGCTCTTCTCCACACAGCTTTCCACACTCCGTCCTTACACTTCTTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR CCA 72 bp GCATTGACTCATGGTCAACTAGGCAGAGCAGAGGAGTaGGCGGGAGCAAGAAAGCGCTTTCAGCTTATCATG +
Preference number: 3 (lower is better)
Translates to: ALTHGQLGRAEE*AGARKRFQLIM
Trigger: CATGATAAGCTGAAAGCGCTTTCTTGCTCCCGCCCACTCCTCTGCTCTGCCTAGTTGACCATGAGTCAATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR CCA 72 bp TCCTGGTCCCTGTGGAAGAAGTGTAAGGACGGAGTGTaGAAAGCTGTGTGGAGAAGAGCAACACCTCCTAGT +
Preference number: 3 (lower is better)
Translates to: SWSLWKKCKDGV*KAVWRRATPPS
Trigger: ACTAGGAGGTGTTGCTCTTCTCCACACAGCTTTCCACACTCCGTCCTTACACTTCTTCCACAGGGACCAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR CCA 72 bp CCCAGCCTTAAGTTCTTCCTTTCCCTGGCTAGATTTTaGGGGAGTCTGGGTCATTTCAGCGAACCTCAGAAC +
Preference number: 3 (lower is better)
Translates to: PSLKFFLSLARF*GSLGHFSEPQN
Trigger: GTTCTGAGGTTCGCTGAAATGACCCAGACTCCCCCAAAATCTAGCCAGGGAAAGGAAGAACTTAAGGCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR CCA 72 bp GGGAAACTGTTCCCAGCCTTAAGTTCTTCCTTTCCCTaGCTAGATTTTGGGGGAGTCTGGGTCATTTCAGCG +
Preference number: 3 (lower is better)
Translates to: GKLFPALSSSFP*LDFGGVWVISA
Trigger: CGCTGAAATGACCCAGACTCCCCCAAAATCTAGCCAGGGAAAGGAAGAACTTAAGGCTGGGAACAGTTTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR TCA 72 bp GCCTTTTCTTCTCAAGCTTTTGGGTTGAAATTTGCCTaGCTTGGGTCTAGCCCAGCCAGAGAGCAGACGCAT +
Preference number: 3 (lower is better)
Translates to: AFSSQAFGLKFA*LGSSPAREQTH
Trigger: ATGCGTCTGCTCTCTGGCTGGGCTAGACCCAAGTCAGGCAAATTTCAACCCAAAAGCTTGAGAAGAAAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR TCA 72 bp GGACAGGCCTGGGGTACGTGGCTGCCTTTGACGAGATaGACAGGAATGTTTCACATTGGCATGTTTAATCCT +
Preference number: 3 (lower is better)
Translates to: GQAWGTWLPLTR*TGMFHIGMFNP
Trigger: AGGATTAAACATGCCAATGTGAAACATTCCTGTTCATCTCGTCAAAGGCAGCCACGTACCCCAGGCCTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR TCA 72 bp AAGATCCATTTTAGAGCTACGGTTCACAAAGAGGTCTaGCTCATTAAGGGAGGCCACAGCCAGACCCTTCCT +
Preference number: 3 (lower is better)
Translates to: KIHFRATVHKEV*LIKGGHSQTLP
Trigger: AGGAAGGGTCTGGCTGTGGCCTCCCTTAATGAGTCAGACCTCTTTGTGAACCGTAGCTCTAAAATGGATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR TCA 72 bp CGTGCTTCCCGAAGCTGGAGGCACGGTAGTGAGCGCTaGGAATCAAGTATAGTTAAAAGAATTCAAGGAAAG +
Preference number: 3 (lower is better)
Translates to: RASRSWRHGSER*ESSIVKRIQGK
Trigger: CTTTCCTTGAATTCTTTTAACTATACTTGATTCTCAGCGCTCACTACCGTGCCTCCAGCTTCGGGAAGCACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR GCA 90 bp GGGGAGCTCCATGCAGCACCGGCCGCCCCTGGTGCCAACGAAGCCCAGGCCCTCCCTGGCTTTCTCCACTaGCTGTGGCCGGGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: GELHAAPAAPGANEAQALPGFLH*LWPGAG
Trigger: CCCTGCTCCCGGCCACAGGCAGTGGAGAAAGCCAGG...GAGGGCCTGGGCTTCGTTGGCACCAGGGGCGGCCGGTGCTGCATGGAGCTCCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR GCA 90 bp TGGCCACCTGGCTTTCTCCACTGCCTGTGGCCGGGAGCAGGGGTCAGGGCCTCACACGCCCCACCCGGATaGCTCCCCCTCTCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: WPPGFLHCLWPGAGVRASHAPPG*LPLSQD
Trigger: GTCCTGGGAGAGGGGGAGGCATCCGGGTGGGGCGTG...TGAGGCCCTGACCCCTGCTCCCGGCCACAGGCAGTGGAGAAAGCCAGGTGGCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR CCA 90 bp TGGCCACCTGGCTTTCTCCACTGCCTGTGGCCGGGAGCAGGGGTCAGGGCCTCACATGGTGTCCCGAGGTaGGGACGGGGCAGGGGTGCC +
Preference number: 4 (lower is better)
Translates to: WPPGFLHCLWPGAGVRASHGVPR*GRGRGA
Trigger: GGCACCCCTGCCCCGTCCCCACCTCGGGACACCATG...TGAGGCCCTGACCCCTGCTCCCGGCCACAGGCAGTGGAGAAAGCCAGGTGGCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR GCA 90 bp TGGCCACCTGGCTTTCTCCACTGCCTGTGGCCGGGAGCAGGGGTCAGGGCCTCACCCCGCTGTACCAGATaGCAGGCAGGCCGGAGAGCG +
Preference number: 4 (lower is better)
Translates to: WPPGFLHCLWPGAGVRASPRCTR*QAGRRA
Trigger: CGCTCTCCGGCCTGCCTGGCATCTGGTACAGCGGGG...TGAGGCCCTGACCCCTGCTCCCGGCCACAGGCAGTGGAGAAAGCCAGGTGGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR CCA 90 bp GGGGAGCTCCATGCAGCACCGGCCGCCCCTGGTGCCAACGAAGCCCAGGCCCTCCGAATCCCTGTGCTTTaGCGGCGGCCGACAGGAAAG +
Preference number: 4 (lower is better)
Translates to: GELHAAPAAPGANEAQALRIPVL*RRPTGK
Trigger: CTTTCCTGTCGGCCGCCGCCAAAGCACAGGGATTCG...GAGGGCCTGGGCTTCGTTGGCACCAGGGGCGGCCGGTGCTGCATGGAGCTCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR TCA 90 bp CGAAGTTGTGAGTCCTTCCATGCCGGGACACTGCTGAGCAGCCCCAGGGAGGGGCCCCCACCTGGGGTCTaGCAGGCCTGCCTCTGGACG +
Preference number: 4 (lower is better)
Translates to: RSCESFHAGTLLSSPREGPPPGV*QACLWT
Trigger: CGTCCAGAGGCAGGCCTGTCAGACCCCAGGTGGGGG...CCCCTCCCTGGGGCTGCTCAGCAGTGTCCCGGCATGGAAGGACTCACAACTTCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR GCA 90 bp ACAGGCCTGCCTCTGGACGGTTACTGTGTACTCCCAGCTGAGGTGAGGGCTGGGGGGTCAGGGCCTCAGTaGCAGGGAGGGGCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: TGLPLDGYCVLPAEVRAGGSGPQ*QGGARG
Trigger: GCCCCTGGCCCCTCCCTGGCACTGAGGCCCTGACCC...CCCAGCCCTCACCTCAGCTGGGAGTACACAGTAACCGTCCAGAGGCAGGCCTGT
68% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR GCA 90 bp TGGCCACCTGGCTTTCTCCACTGCCTGTGGCCGGGAGCAGGGGTCAGGGCCTCAGAGCCCTCGCTCCCATaGCCCAGGAGTAGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: WPPGFLHCLWPGAGVRASEPSLP*PRSSAG
Trigger: GCCAGCACTACTCCTGGGGCATGGGAGCGAGGGCTC...TGAGGCCCTGACCCCTGCTCCCGGCCACAGGCAGTGGAGAAAGCCAGGTGGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR GCA 90 bp AGCAGACGCATGGAGGAACTGAGTGCCGGGGGCCACTGCGGAAGAGCCCCCTTACATTCATGCCTGGCTTaGGCAGGCGGCGGGCGGGGA +
Preference number: 4 (lower is better)
Translates to: SRRMEELSAGGHCGRAPLHSCLA*AGGGRG
Trigger: TCCCCGCCCGCCGCCTGCGCAAGCCAGGCATGAATG...TAAGGGGGCTCTTCCGCAGTGGCCCCCGGCACTCAGTTCCTCCATGCGTCTGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR CCA 90 bp GGGGAGCTCCATGCAGCACCGGCCGCCCCTGGTGCCAACGAAGCCCAGGCCCTCCCGCGCATACACGTCTaGGTAGTGGGTCTTCTGGAA +
Preference number: 4 (lower is better)
Translates to: GELHAAPAAPGANEAQALPRIHV*VVGLLE
Trigger: TTCCAGAAGACCCACTACCCAGACGTGTATGCGCGG...GAGGGCCTGGGCTTCGTTGGCACCAGGGGCGGCCGGTGCTGCATGGAGCTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR GCA 90 bp ACACAGAGCCCCCATCTGCCGTGGAAGGCTCTGGGCAGCGATGACACTGACAGAACCGGCCGCCCCTGGTaGCAACGAAGCCCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: TQSPHLPWKALGSDDTDRTGRPW*QRSPGP
Trigger: AGGGCCTGGGCTTCGTTGGCACCAGGGGCGGCCGGT...TCTGTCAGTGTCATCGCTGCCCAGAGCCTTCCACGGCAGATGGGGGCTCTGTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR CCA 90 bp GGCGCCTTGGCCCCAGCAGGTCGGATTCCGTGTGCTTTCAGGGAGAGAAAGATGAGCACCGGCCGCCCCTaGTGCCAACGAAGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: GALAPAGRIPCAFRERKMSTGRP*CQRSPG
Trigger: GCCTGGGCTTCGTTGGCACCAGGGGCGGCCGGTGCT...CATCTTTCTCTCCCTGAAAGCACACGGAATCCGACCTGCTGGGGCCAAGGCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR TCA 90 bp GGCTGTCAGTGTGGGGAGGCTGCCCATCCATCTGCCGGCTACCCACGACTTTATTGCCTTCCTGGAGTTTaGGGCTGCCGTCCGGGGGCG +
Preference number: 4 (lower is better)
Translates to: GCQCGEAAHPSAGYPRLYCLPGV*GCRPGA
Trigger: CGCCCCCGGACGGCAGCCTCAAACTCCAGGAAGGCA...ATAAAGTCGTGGGTAGCCGGCAGATGGATGGGCAGCCTCCCCACACTGACAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR TCA 90 bp TGGCCACCTGGCTTTCTCCACTGCCTGTGGCCGGGAGCAGGGGTCAGGGCCTCAGCCCTTGTTGCTCTCTaGGTCGGCCTTCTCCAATGG +
Preference number: 4 (lower is better)
Translates to: WPPGFLHCLWPGAGVRASALVAL*VGLLQW
Trigger: CCATTGGAGAAGGCCGACTCAGAGAGCAACAAGGGC...TGAGGCCCTGACCCCTGCTCCCGGCCACAGGCAGTGGAGAAAGCCAGGTGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR TCA 90 bp TGGGCAGCTGCCCTGACTTGCTCAGTCATCCTAGGAGCTGACACGGCAGTGGCCCACTCAGGAAGTCGGTaGCGCTGCTGGCCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: WAAALTCSVILGADTAVAHSGSR*RCWPQS
Trigger: GCTCTGGGGCCAGCAGCGTCACCGACTTCCTGAGTG...GGCCACTGCCGTGTCAGCTCCTAGGATGACTGAGCAAGTCAGGGCAGCTGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR GCA 90 bp GGCGCCTTGGCCCCAGCAGGTCGGATTCCGTGTGCTTTCAGGGAGAGAAAGATGCGTCCGGGGGCGTCTTaGAGGCGCCTCGCTGCAAGT +
Preference number: 4 (lower is better)
Translates to: GALAPAGRIPCAFRERKMRPGAS*RRLAAS
Trigger: ACTTGCAGCGAGGCGCCTGCAAGACGCCCCCGGACG...CATCTTTCTCTCCCTGAAAGCACACGGAATCCGACCTGCTGGGGCCAAGGCGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR GCA 90 bp GCAAAGGGTGTTCTGGGAGTGCCCGGCTACCTCTGCACTCCATTTTGCCCCATGGGGACGGGGCAGGGGTaGCCTGTCATGTGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: AKGVLGVPGYLCTPFCPMGTGQG*PVMWPR
Trigger: CCTGGGCCACATGACAGGGCACCCCTGCCCCGTCCC...CATGGGGCAAAATGGAGTGCAGAGGTAGCCGGGCACTCCCAGAACACCCTTTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR CCA 90 bp AAGGGAGAAGGTAGAAAAGGCGAGCGCTTCAATGCGGGGCGCTGCCTGCTGGAGCATGGGCGTGGCCCATaGTGTCCCGAGGTGGGGACG +
Preference number: 4 (lower is better)
Translates to: KGEGRKGERFNAGRCLLEHGRGP*CPEVGT
Trigger: CGTCCCCACCTCGGGACACCATGGGCCACGCCCATG...CTCCAGCAGGCAGCGCCCCGCATTGAAGCGCTCGCCTTTTCTACCTTCTCCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR CCA 90 bp CTGGATGGAGAACAAAGCTGCCCAGACCTCCCCGCTGTACCAGATGCCAGGCAGTGTCCAGTGAGGGGCTaGCCCGTGTCTCCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: LDGEQSCPDLPAVPDARQCPVRG*PVSPLG
Trigger: CCCCAGGGGAGACACGGGCCAGCCCCTCACTGGACA...CTGCCTGGCATCTGGTACAGCGGGGAGGTCTGGGCAGCTTTGTTCTCCATCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR GCA 90 bp CTGGATGGAGAACAAAGCTGCCCAGACCTCCCCGCTGTACCAGATGCCAGGCAGGTCCCCGAATCCCTGTaGTTTGGCGGCGGCCGACAG +
Preference number: 4 (lower is better)
Translates to: LDGEQSCPDLPAVPDARQVPESL*FGGGRQ
Trigger: CTGTCGGCCGCCGCCAAAGCACAGGGATTCGGGGAC...CTGCCTGGCATCTGGTACAGCGGGGAGGTCTGGGCAGCTTTGTTCTCCATCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR GCA 90 bp GAGGGCAGTAGCAGCACCTTAGTGTCAAGCCTTGCCATGCTGAGACCTGTGCCCGGGCATGAGGGGACATaGAGGCAGGCACCGGGTCGC +
Preference number: 4 (lower is better)
Translates to: EGSSSTLVSSLAMLRPVPGHEGT*RQAPGR
Trigger: GCGACCCGGTGCCTGCCTGCATGTCCCCTCATGCCC...GGGCACAGGTCTCAGCATGGCAAGGCTTGACACTAAGGTGCTGCTACTGCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR GCA 90 bp AGCAGACGCATGGAGGAACTGAGTGCCGGGGGCCACTGCGGAAGAGCCCCCTTAAGGGTGTTCTGGGAGTaGCCGGCTACCTCTGCACTC +
Preference number: 4 (lower is better)
Translates to: SRRMEELSAGGHCGRAPLRVFWE*PATSAL
Trigger: GAGTGCAGAGGTAGCCGGGCACTCCCAGAACACCCT...TAAGGGGGCTCTTCCGCAGTGGCCCCCGGCACTCAGTTCCTCCATGCGTCTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR CCA 90 bp GGCGCCTTGGCCCCAGCAGGTCGGATTCCGTGTGCTTTCAGGGAGAGAAAGATGCCGCACTGTGCTCCTTaGCCTTCATGCGGAGGGCCG +
Preference number: 4 (lower is better)
Translates to: GALAPAGRIPCAFRERKMPHCAP*PSCGGP
Trigger: CGGCCCTCCGCATGAAGGCCAAGGAGCACAGTGCGG...CATCTTTCTCTCCCTGAAAGCACACGGAATCCGACCTGCTGGGGCCAAGGCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR CCA 90 bp GAGGAAAGTCGAGTGGGAGGCTGGGGGCCTGGAAAACATGGGCGTGGCCCATGGAGTCGAGTGGGAGGCTaGGGGCCTGGAAAACATGGG +
Preference number: 4 (lower is better)
Translates to: EESRVGGWGPGKHGRGPWSRVGG*GPGKHG
Trigger: CCCATGTTTTCCAGGCCCCCAGCCTCCCACTCGACT...CCATGGGCCACGCCCATGTTTTCCAGGCCCCCAGCCTCCCACTCGACTTTCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR CCA 90 bp TGGGCAGCTGCCCTGACTTGCTCAGTCATCCTAGGAGCTGACACGGCAGTGGCCCCTCCTGGCCCACTCTaGAGCTACCTGGCTCTCCTC +
Preference number: 4 (lower is better)
Translates to: WAAALTCSVILGADTAVAPPGPL*SYLALL
Trigger: GAGGAGAGCCAGGTAGCTCCAGAGTGGGCCAGGAGG...GGCCACTGCCGTGTCAGCTCCTAGGATGACTGAGCAAGTCAGGGCAGCTGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR CCA 90 bp TGGCCACCTGGCTTTCTCCACTGCCTGTGGCCGGGAGCAGGGGTCAGGGCCTCAATGCCCATGAGGCATTaGAGAGGGGAGCTCCATGCA +
Preference number: 4 (lower is better)
Translates to: WPPGFLHCLWPGAGVRASMPMRH*RGELHA
Trigger: TGCATGGAGCTCCCCTCTCCAATGCCTCATGGGCAT...TGAGGCCCTGACCCCTGCTCCCGGCCACAGGCAGTGGAGAAAGCCAGGTGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR TCA 90 bp CCACCCGGCCCCCAAGCTCTAGCTTATGTGTTCCGAAGTTGTGAGTCCTTCCATCAGCCACCGGCCTGGTaGCCAGGGGACCCCACTAGG +
Preference number: 4 (lower is better)
Translates to: PPGPQALAYVFRSCESFHQPPAW*PGDPTR
Trigger: CCTAGTGGGGTCCCCTGGTCACCAGGCCGGTGGCTG...ATGGAAGGACTCACAACTTCGGAACACATAAGCTAGAGCTTGGGGGCCGGGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR TCA 90 bp ACACAGAGCCCCCATCTGCCGTGGAAGGCTCTGGGCAGCGATGACACTGACAGACCCTATAGTGTCCAGTaGGGGGCTGGCCCGTGTCTC +
Preference number: 4 (lower is better)
Translates to: TQSPHLPWKALGSDDTDRPYSVQ*GAGPCL
Trigger: GAGACACGGGCCAGCCCCTCACTGGACACTATAGGG...TCTGTCAGTGTCATCGCTGCCCAGAGCCTTCCACGGCAGATGGGGGCTCTGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR TCA 90 bp CCACCCGGCCCCCAAGCTCTAGCTTATGTGTTCCGAAGTTGTGAGTCCTTCCATATGCCGGGACACTGCTaGGCAGCCCCAGGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: PPGPQALAYVFRSCESFHMPGHC*AAPGRG
Trigger: GCCCCTCCCTGGGGCTGCTCAGCAGTGTCCCGGCAT...ATGGAAGGACTCACAACTTCGGAACACATAAGCTAGAGCTTGGGGGCCGGGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR TCA 90 bp ACACAGAGCCCCCATCTGCCGTGGAAGGCTCTGGGCAGCGATGACACTGACAGACTGTGTACTCCCAGCTaGGGTGAGGGCTGGGGCTCA +
Preference number: 4 (lower is better)
Translates to: TQSPHLPWKALGSDDTDRLCTPS*GEGWGS
Trigger: TGAGCCCCAGCCCTCACCTCAGCTGGGAGTACACAG...TCTGTCAGTGTCATCGCTGCCCAGAGCCTTCCACGGCAGATGGGGGCTCTGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR TCA 90 bp GAGGAAAGTCGAGTGGGAGGCTGGGGGCCTGGAAAACATGGGCGTGGCCCATGGCTGAGTGAATGCCCATaGGGCATTGGAGAGGGGAGC +
Preference number: 4 (lower is better)
Translates to: EESRVGGWGPGKHGRGPWLSECP*GIGEGS
Trigger: GCTCCCCTCTCCAATGCCTCATGGGCATTCACTCAG...CCATGGGCCACGCCCATGTTTTCCAGGCCCCCAGCCTCCCACTCGACTTTCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR TCA 90 bp GGCTGTCAGTGTGGGGAGGCTGCCCATCCATCTGCCGGCTACCCACGACTTTATAGTCATCCTAGGAGCTaGCACGGCAGTGGCCCCCTG +
Preference number: 4 (lower is better)
Translates to: GCQCGEAAHPSAGYPRLYSHPRS*HGSGPL
Trigger: CAGGGGGCCACTGCCGTGTCAGCTCCTAGGATGACT...ATAAAGTCGTGGGTAGCCGGCAGATGGATGGGCAGCCTCCCCACACTGACAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR GCA 90 bp AGCAGACGCATGGAGGAACTGAGTGCCGGGGGCCACTGCGGAAGAGCCCCCTTACCGACAGGAAAGTTGTaGCGAACTTGTCGCCTCCGG +
Preference number: 4 (lower is better)
Translates to: SRRMEELSAGGHCGRAPLPTGKL*RTCRLR
Trigger: CCGGAGGCGACAAGTTCGGCACAACTTTCCTGTCGG...TAAGGGGGCTCTTCCGCAGTGGCCCCCGGCACTCAGTTCCTCCATGCGTCTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR GCA 90 bp TGGGCAGCTGCCCTGACTTGCTCAGTCATCCTAGGAGCTGACACGGCAGTGGCCTCTGGCCCACGTGACTaGCAGCCCCAGACACACTCA +
Preference number: 4 (lower is better)
Translates to: WAAALTCSVILGADTAVASGPRD*QPQTHS
Trigger: TGAGTGTGTCTGGGGCTGGCAGTCACGTGGGCCAGA...GGCCACTGCCGTGTCAGCTCCTAGGATGACTGAGCAAGTCAGGGCAGCTGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR GCA 90 bp GAGGAAAGTCGAGTGGGAGGCTGGGGGCCTGGAAAACATGGGCGTGGCCCATGGGAAATGGCCGCACTGTaGTCCTTGGCCTTCATGCGG +
Preference number: 4 (lower is better)
Translates to: EESRVGGWGPGKHGRGPWEMAAL*SLAFMR
Trigger: CCGCATGAAGGCCAAGGAGCACAGTGCGGCCATTTC...CCATGGGCCACGCCCATGTTTTCCAGGCCCCCAGCCTCCCACTCGACTTTCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR GCA 90 bp AAGGGAGAAGGTAGAAAAGGCGAGCGCTTCAATGCGGGGCGCTGCCTGCTGGAGAGTGCCGGGGGCCACTaGGGAAGAGCCCCCTTAAAG +
Preference number: 4 (lower is better)
Translates to: KGEGRKGERFNAGRCLLESAGGH*GRAPLK
Trigger: CTTTAAGGGGGCTCTTCCGCAGTGGCCCCCGGCACT...CTCCAGCAGGCAGCGCCCCGCATTGAAGCGCTCGCCTTTTCTACCTTCTCCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR GCA 90 bp ACACAGAGCCCCCATCTGCCGTGGAAGGCTCTGGGCAGCGATGACACTGACAGAAGTGGCCCCCTGCTCTaGAGTGCAGAAGGTTGGGCC +
Preference number: 4 (lower is better)
Translates to: TQSPHLPWKALGSDDTDRSGPLL*SAEGWA
Trigger: GGCCCAACCTTCTGCACTGCAGAGCAGGGGGCCACT...TCTGTCAGTGTCATCGCTGCCCAGAGCCTTCCACGGCAGATGGGGGCTCTGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR GCA 90 bp ACAGGCCTGCCTCTGGACGGTTACTGTGTACTCCCAGCTGAGGTGAGGGCTGGGGACCCACCCCACACTTaGTGCACCTACCCCATCGCA +
Preference number: 4 (lower is better)
Translates to: TGLPLDGYCVLPAEVRAGDPPHT*CTYPIA
Trigger: TGCGATGGGGTAGGTGCAGCAAGTGTGGGGTGGGTC...CCCAGCCCTCACCTCAGCTGGGAGTACACAGTAACCGTCCAGAGGCAGGCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR GCA 90 bp CGAAGTTGTGAGTCCTTCCATGCCGGGACACTGCTGAGCAGCCCCAGGGAGGGGGAAGCGTCCCTCGTCTaGCCAGCCGAAATGACAGGA +
Preference number: 4 (lower is better)
Translates to: RSCESFHAGTLLSSPREGEASLV*PAEMTG
Trigger: TCCTGTCATTTCGGCTGGGCAGACGAGGGACGCTTC...CCCCTCCCTGGGGCTGCTCAGCAGTGTCCCGGCATGGAAGGACTCACAACTTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR CCA 90 bp GAGGGCAGTAGCAGCACCTTAGTGTCAAGCCTTGCCATGCTGAGACCTGTGCCCAACGGGCCCGGCTCTTaGCGTCCCCGAATCCCTGTG +
Preference number: 4 (lower is better)
Translates to: EGSSSTLVSSLAMLRPVPNGPGS*RPRIPV
Trigger: CACAGGGATTCGGGGACGCCAAGAGCCGGGCCCGTT...GGGCACAGGTCTCAGCATGGCAAGGCTTGACACTAAGGTGCTGCTACTGCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR CCA 90 bp GAGGAAAGTCGAGTGGGAGGCTGGGGGCCTGGAAAACATGGGCGTGGCCCATGGTGCGGGGTCGACGGCTaGGGCTGGAACTTGTTAAAG +
Preference number: 4 (lower is better)
Translates to: EESRVGGWGPGKHGRGPWCGVDG*GWNLLK
Trigger: CTTTAACAAGTTCCAGCCCCAGCCGTCGACCCCGCA...CCATGGGCCACGCCCATGTTTTCCAGGCCCCCAGCCTCCCACTCGACTTTCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR CCA 90 bp GGCGCCTTGGCCCCAGCAGGTCGGATTCCGTGTGCTTTCAGGGAGAGAAAGATGCCGCTGCTGCCTTCCTaGAGTTTGAGGCTGCCGTCC +
Preference number: 4 (lower is better)
Translates to: GALAPAGRIPCAFRERKMPLLPS*SLRLPS
Trigger: GGACGGCAGCCTCAAACTCCAGGAAGGCAGCAGCGG...CATCTTTCTCTCCCTGAAAGCACACGGAATCCGACCTGCTGGGGCCAAGGCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR CCA 90 bp CAGCTAGGCCTGTTTGCCTTTGCACTGGACAGTAAGGGCCATGAAACAGACCAGGAGCTGGCCCGGTCCTaGGGCCCCTTCACCCCAGCC +
Preference number: 4 (lower is better)
Translates to: QLGLFAFALDSKGHETDQELARS*GPFTPA
Trigger: GGCTGGGGTGAAGGGGCCCCAGGACCGGGCCAGCTC...CTGGTCTGTTTCATGGCCCTTACTGTCCAGTGCAAAGGCAAACAGGCCTAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR CCA 90 bp GGCTGTCAGTGTGGGGAGGCTGCCCATCCATCTGCCGGCTACCCACGACTTTATCCTTCTCCAATGGGCTaGGGAGGTCTGAGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: GCQCGEAAHPSAGYPRLYPSPMG*GGLSWP
Trigger: GGGCCAGCTCAGACCTCCCCAGCCCATTGGAGAAGG...ATAAAGTCGTGGGTAGCCGGCAGATGGATGGGCAGCCTCCCCACACTGACAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR CCA 90 bp GAGGAAAGTCGAGTGGGAGGCTGGGGGCCTGGAAAACATGGGCGTGGCCCATGGATGTGGCCCAGGAAATaGCCGCACTGTGCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: EESRVGGWGPGKHGRGPWMWPRK*PHCAPW
Trigger: CCAAGGAGCACAGTGCGGCCATTTCCTGGGCCACAT...CCATGGGCCACGCCCATGTTTTCCAGGCCCCCAGCCTCCCACTCGACTTTCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR CCA 90 bp GGCGCCTTGGCCCCAGCAGGTCGGATTCCGTGTGCTTTCAGGGAGAGAAAGATGGGGTGCCCTGTCATGTaGCCCAGGAAATGGCCGCAC +
Preference number: 4 (lower is better)
Translates to: GALAPAGRIPCAFRERKMGCPVM*PRKWPH
Trigger: GTGCGGCCATTTCCTGGGCCACATGACAGGGCACCC...CATCTTTCTCTCCCTGAAAGCACACGGAATCCGACCTGCTGGGGCCAAGGCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR CCA 90 bp TCAGGAGGGCATCCTGACAGCCCCATTTGCAATAGCAAAGCCACACCGAGGAGCGGGAGGCTGGGGGCCTaGAAAACATGGGCGTGGCCC +
Preference number: 4 (lower is better)
Translates to: SGGHPDSPICNSKATPRSGRLGA*KTWAWP
Trigger: GGGCCACGCCCATGTTTTCCAGGCCCCCAGCCTCCC...GCTCCTCGGTGTGGCTTTGCTATTGCAAATGGGGCTGTCAGGATGCCCTCCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR CCA 90 bp AGCTCCAGATGGCCTTGGGCAGCTGCCCTGACTTGCTCAGTCATCCTAGGAGCTTGGAGGCTGGCGCCTTaGCCCCAGCAGGTCGGATTC +
Preference number: 4 (lower is better)
Translates to: SSRWPWAAALTCSVILGAWRLAP*PQQVGF
Trigger: GAATCCGACCTGCTGGGGCCAAGGCGCCAGCCTCCA...AGCTCCTAGGATGACTGAGCAAGTCAGGGCAGCTGCCCAAGGCCATCTGGAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR CCA 90 bp ACAGGCCTGCCTCTGGACGGTTACTGTGTACTCCCAGCTGAGGTGAGGGCTGGGCACAGCTGTGTGTGCTaGGGACCCACCCCACACTTG +
Preference number: 4 (lower is better)
Translates to: TGLPLDGYCVLPAEVRAGHSCVC*GPTPHL
Trigger: CAAGTGTGGGGTGGGTCCCCAGCACACACAGCTGTG...CCCAGCCCTCACCTCAGCTGGGAGTACACAGTAACCGTCCAGAGGCAGGCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR CCA 90 bp GAGGAAAGTCGAGTGGGAGGCTGGGGGCCTGGAAAACATGGGCGTGGCCCATGGCGAAATGACAGGAGATaGGGCACGGAGCTGGGTCCA +
Preference number: 4 (lower is better)
Translates to: EESRVGGWGPGKHGRGPWRNDRR*GTELGP
Trigger: TGGACCCAGCTCCGTGCCCCATCTCCTGTCATTTCG...CCATGGGCCACGCCCATGTTTTCCAGGCCCCCAGCCTCCCACTCGACTTTCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR TCA 90 bp CGAAGTTGTGAGTCCTTCCATGCCGGGACACTGCTGAGCAGCCCCAGGGAGGGGCCTGGCCCTACTCCATaGCAGGAATCAAGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: RSCESFHAGTLLSSPREGPGPTP*QESREK
Trigger: CTTCTCCCTTGATTCCTGTCATGGAGTAGGGCCAGG...CCCCTCCCTGGGGCTGCTCAGCAGTGTCCCGGCATGGAAGGACTCACAACTTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR TCA 90 bp GAGGAAAGTCGAGTGGGAGGCTGGGGGCCTGGAAAACATGGGCGTGGCCCATGGGGGTTGAAATTTGCCTaGCTTGGGTCTAGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: EESRVGGWGPGKHGRGPWGLKFA*LGSSPA
Trigger: GGCTGGGCTAGACCCAAGTCAGGCAAATTTCAACCC...CCATGGGCCACGCCCATGTTTTCCAGGCCCCCAGCCTCCCACTCGACTTTCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR TCA 90 bp TGGCCACCTGGCTTTCTCCACTGCCTGTGGCCGGGAGCAGGGGTCAGGGCCTCAGTACGTGGCTGCCTTTaGCGAGATGAACAGGAATGT +
Preference number: 4 (lower is better)
Translates to: WPPGFLHCLWPGAGVRASVRGCL*RDEQEC
Trigger: ACATTCCTGTTCATCTCGTCAAAGGCAGCCACGTAC...TGAGGCCCTGACCCCTGCTCCCGGCCACAGGCAGTGGAGAAAGCCAGGTGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR TCA 90 bp AGCAGACGCATGGAGGAACTGAGTGCCGGGGGCCACTGCGGAAGAGCCCCCTTAGGAGAACTGAGCTGCTaGGTGAATGCCCATGAGGCA +
Preference number: 4 (lower is better)
Translates to: SRRMEELSAGGHCGRAPLGELSC*VNAHEA
Trigger: TGCCTCATGGGCATTCACTCAGCAGCTCAGTTCTCC...TAAGGGGGCTCTTCCGCAGTGGCCCCCGGCACTCAGTTCCTCCATGCGTCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR GCA 90 bp CGAAGTTGTGAGTCCTTCCATGCCGGGACACTGCTGAGCAGCCCCAGGGAGGGGGGTTCCGCCGCTTCTTaGCCTTGTTGCTCTCTGAGT +
Preference number: 4 (lower is better)
Translates to: RSCESFHAGTLLSSPREGGSAAS*PCCSLS
Trigger: ACTCAGAGAGCAACAAGGGCAAGAAGCGGCGGAACC...CCCCTCCCTGGGGCTGCTCAGCAGTGTCCCGGCATGGAAGGACTCACAACTTCG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR GCA 90 bp AAGGGAGAAGGTAGAAAAGGCGAGCGCTTCAATGCGGGGCGCTGCCTGCTGGAGTTCTGGAACCAGACCTaGACGCGGGCCTCAGTGAGG +
Preference number: 4 (lower is better)
Translates to: KGEGRKGERFNAGRCLLEFWNQT*TRASVR
Trigger: CCTCACTGAGGCCCGCGTGCAGGTCTGGTTCCAGAA...CTCCAGCAGGCAGCGCCCCGCATTGAAGCGCTCGCCTTTTCTACCTTCTCCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR CCA 90 bp TGGGCAGCTGCCCTGACTTGCTCAGTCATCCTAGGAGCTGACACGGCAGTGGCCAAGGATGGACAAGACTaGGCTGGTGAGGCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: WAAALTCSVILGADTAVAKDGQD*AGEAAG
Trigger: CCCAGCAGCCTCACCAGCCCAGTCTTGTCCATCCTT...GGCCACTGCCGTGTCAGCTCCTAGGATGACTGAGCAAGTCAGGGCAGCTGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR CCA 90 bp AAGGGAGAAGGTAGAAAAGGCGAGCGCTTCAATGCGGGGCGCTGCCTGCTGGAGACACCTCCTAGTGCCTaGAGGGACACAGAGCCCCCA +
Preference number: 4 (lower is better)
Translates to: KGEGRKGERFNAGRCLLETPPSA*RDTEPP
Trigger: TGGGGGCTCTGTGTCCCTCCAGGCACTAGGAGGTGT...CTCCAGCAGGCAGCGCCCCGCATTGAAGCGCTCGCCTTTTCTACCTTCTCCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR CCA 90 bp AGCAGACGCATGGAGGAACTGAGTGCCGGGGGCCACTGCGGAAGAGCCCCCTTAGAGGGCAGAGAGTCCTaGTCCCTGTGGAAGAAGTGT +
Preference number: 4 (lower is better)
Translates to: SRRMEELSAGGHCGRAPLEGRES*SLWKKC
Trigger: ACACTTCTTCCACAGGGACCAGGACTCTCTGCCCTC...TAAGGGGGCTCTTCCGCAGTGGCCCCCGGCACTCAGTTCCTCCATGCGTCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR CCA 90 bp GGCGCCTTGGCCCCAGCAGGTCGGATTCCGTGTGCTTTCAGGGAGAGAAAGATGCAGAGCCCCGCTTCCTaGAGGCAGGAAGCCTGGTTT +
Preference number: 4 (lower is better)
Translates to: GALAPAGRIPCAFRERKMQSPAS*RQEAWF
Trigger: AAACCAGGCTTCCTGCCTCCAGGAAGCGGGGCTCTG...CATCTTTCTCTCCCTGAAAGCACACGGAATCCGACCTGCTGGGGCCAAGGCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR CCA 90 bp AAGGGAGAAGGTAGAAAAGGCGAGCGCTTCAATGCGGGGCGCTGCCTGCTGGAGCCTCCCTGCCTGCTCTaGAGCTACCTGTCTGTCCTC +
Preference number: 4 (lower is better)
Translates to: KGEGRKGERFNAGRCLLEPPCLL*SYLSVL
Trigger: GAGGACAGACAGGTAGCTCCAGAGCAGGCAGGGAGG...CTCCAGCAGGCAGCGCCCCGCATTGAAGCGCTCGCCTTTTCTACCTTCTCCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR TCA 90 bp CTGGATGGAGAACAAAGCTGCCCAGACCTCCCCGCTGTACCAGATGCCAGGCAGTCACCCCAGCCTCCTTaGCACTCAGGTAGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: LDGEQSCPDLPAVPDARQSPQPP*HSGSCC
Trigger: ACAGCAGCTACCTGAGTGTCAAGGAGGCTGGGGTGA...CTGCCTGGCATCTGGTACAGCGGGGAGGTCTGGGCAGCTTTGTTCTCCATCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR TCA 90 bp GCAAAGGGTGTTCTGGGAGTGCCCGGCTACCTCTGCACTCCATTTTGCCCCATGCTCCTGGAGGGAACCTaGCTGGGCTCTGGATGGAGA +
Preference number: 4 (lower is better)
Translates to: AKGVLGVPGYLCTPFCPMLLEGT*LGSGWR
Trigger: TCTCCATCCAGAGCCCAGTCAGGTTCCCTCCAGGAG...CATGGGGCAAAATGGAGTGCAGAGGTAGCCGGGCACTCCCAGAACACCCTTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR GCA 90 bp AAGGGAGAAGGTAGAAAAGGCGAGCGCTTCAATGCGGGGCGCTGCCTGCTGGAGCGAACCTGCTGCATCTaGCCAAAACGCTCCCGCTTC +
Preference number: 4 (lower is better)
Translates to: KGEGRKGERFNAGRCLLERTCCI*PKRSRF
Trigger: GAAGCGGGAGCGTTTTGGGCAGATGCAGCAGGTTCG...CTCCAGCAGGCAGCGCCCCGCATTGAAGCGCTCGCCTTTTCTACCTTCTCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR GCA 90 bp TCAGTGTGGGGAGGCTGCCCATCCATCTGCCGGCTACCCACGACTTTATTTTTATGCGGAGGGCCGCGATaGTCGAGGTCTTGCGGTCCG +
Preference number: 4 (lower is better)
Translates to: SVWGGCPSICRLPTTLFLCGGPR*SRSCGP
Trigger: CGGACCGCAAGACCTCGAGCATCGCGGCCCTCCGCA...TAAAAATAAAGTCGTGGGTAGCCGGCAGATGGATGGGCAGCCTCCCCACACTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR GCA 90 bp TGTCATCCTCTGCCCACTCTCTCCAGGTGTATCCAGCCTAGGGGACAGCCAGGACTGCAGGGCAGCCTGTaGTTCAGACACACAGCCACC +
Preference number: 4 (lower is better)
Translates to: CHPLPTLSRCIQPRGQPGLQGSL*FRHTAT
Trigger: GGTGGCTGTGTGTCTGAAGCACAGGCTGCCCTGCAG...TCCTGGCTGTCCCCTAGGCTGGATACACCTGGAGAGAGTGGGCAGAGGATGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR GCA 90 bp AGCTCCAGATGGCCTTGGGCAGCTGCCCTGACTTGCTCAGTCATCCTAGGAGCTACGGCAGTGGCCCCCTaGTCTGCAGTGCAGAAGGTT +
Preference number: 4 (lower is better)
Translates to: SSRWPWAAALTCSVILGATAVAP*SAVQKV
Trigger: AACCTTCTGCACTGCAGAGCAGGGGGCCACTGCCGT...AGCTCCTAGGATGACTGAGCAAGTCAGGGCAGCTGCCCAAGGCCATCTGGAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR GCA 90 bp TGGGCAGCTGCCCTGACTTGCTCAGTCATCCTAGGAGCTGACACGGCAGTGGCCCACGTGGCAGGTAGATaGTTCTCTCCACCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: WAAALTCSVILGADTAVAHVAGR*FSPPAF
Trigger: GAAGGCAGGTGGAGAGAAGCATCTACCTGCCACGTG...GGCCACTGCCGTGTCAGCTCCTAGGATGACTGAGCAAGTCAGGGCAGCTGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR GCA 90 bp GGCGCCTTGGCCCCAGCAGGTCGGATTCCGTGTGCTTTCAGGGAGAGAAAGATGGGCTGCCCATCCATCTaGCGGCTACCCACGACTTTA +
Preference number: 4 (lower is better)
Translates to: GALAPAGRIPCAFRERKMGCPSI*RLPTTL
Trigger: TAAAGTCGTGGGTAGCCGGCAGATGGATGGGCAGCC...CATCTTTCTCTCCCTGAAAGCACACGGAATCCGACCTGCTGGGGCCAAGGCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR GCA 90 bp TGTCATCCTCTGCCCACTCTCTCCAGGTGTATCCAGCCTAGGGGACAGCCAGGACTAACCTGGCCACCGTaGTTCCCGAAGCTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: CHPLPTLSRCIQPRGQPGLTWPP*FPKLEA
Trigger: TGCCTCCAGCTTCGGGAAGCACGGTGGCCAGGTTAG...TCCTGGCTGTCCCCTAGGCTGGATACACCTGGAGAGAGTGGGCAGAGGATGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR GCA 90 bp GCAAAGGGTGTTCTGGGAGTGCCCGGCTACCTCTGCACTCCATTTTGCCCCATGCCACCCCACACTTGCTaGACCTACCCCATCGCAGTG +
Preference number: 4 (lower is better)
Translates to: AKGVLGVPGYLCTPFCPMPPHTC*TYPIAV
Trigger: CACTGCGATGGGGTAGGTGCAGCAAGTGTGGGGTGG...CATGGGGCAAAATGGAGTGCAGAGGTAGCCGGGCACTCCCAGAACACCCTTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR CCA 90 bp CCACCCGGCCCCCAAGCTCTAGCTTATGTGTTCCGAAGTTGTGAGTCCTTCCATCTCAGCATTCATGCCTaGCTTGCGCAGGCGGCGGGC +
Preference number: 4 (lower is better)
Translates to: PPGPQALAYVFRSCESFHLSIHA*LAQAAG
Trigger: GCCCGCCGCCTGCGCAAGCCAGGCATGAATGCTGAG...ATGGAAGGACTCACAACTTCGGAACACATAAGCTAGAGCTTGGGGGCCGGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR CCA 90 bp ACACAGAGCCCCCATCTGCCGTGGAAGGCTCTGGGCAGCGATGACACTGACAGATGGAAAACATGGGCGTaGCCCATGGTGTCCCGAGGT +
Preference number: 4 (lower is better)
Translates to: TQSPHLPWKALGSDDTDRWKTWA*PMVSRG
Trigger: ACCTCGGGACACCATGGGCCACGCCCATGTTTTCCA...TCTGTCAGTGTCATCGCTGCCCAGAGCCTTCCACGGCAGATGGGGGCTCTGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR CCA 90 bp CTTTCAGCTTATCATGGATGCGAAGCTGAAAAACGTGGCCACCTGGCTTTCTCCGGGGGAGGTGGAGGCTaGCGCCTTGGCCCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: LSAYHGCEAEKRGHLAFSGGGGG*RLGPSR
Trigger: CCTGCTGGGGCCAAGGCGCCAGCCTCCACCTCCCCC...GGAGAAAGCCAGGTGGCCACGTTTTTCAGCTTCGCATCCATGATAAGCTGAAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR CCA 90 bp GGCGCCTTGGCCCCAGCAGGTCGGATTCCGTGTGCTTTCAGGGAGAGAAAGATGACTGGCATTGCTAGATaGCAGCAGGGGTCCTCGGCT +
Preference number: 4 (lower is better)
Translates to: GALAPAGRIPCAFRERKMTGIAR*QQGSSA
Trigger: AGCCGAGGACCCCTGCTGCCATCTAGCAATGCCAGT...CATCTTTCTCTCCCTGAAAGCACACGGAATCCGACCTGCTGGGGCCAAGGCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR CCA 90 bp AGCAGACGCATGGAGGAACTGAGTGCCGGGGGCCACTGCGGAAGAGCCCCCTTAAACCTGACTGGGCTCTaGATGGAGAACAAAGCTGCC +
Preference number: 4 (lower is better)
Translates to: SRRMEELSAGGHCGRAPLNLTGL*MENKAA
Trigger: GGCAGCTTTGTTCTCCATCCAGAGCCCAGTCAGGTT...TAAGGGGGCTCTTCCGCAGTGGCCCCCGGCACTCAGTTCCTCCATGCGTCTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR CCA 90 bp CTGGATGGAGAACAAAGCTGCCCAGACCTCCCCGCTGTACCAGATGCCAGGCAGTGGAGGCAGGAAGCCTaGTTTCAGGAGGGCATCCTG +
Preference number: 4 (lower is better)
Translates to: LDGEQSCPDLPAVPDARQWRQEA*FQEGIL
Trigger: CAGGATGCCCTCCTGAAACCAGGCTTCCTGCCTCCA...CTGCCTGGCATCTGGTACAGCGGGGAGGTCTGGGCAGCTTTGTTCTCCATCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR CCA 90 bp CAGCTAGGCCTGTTTGCCTTTGCACTGGACAGTAAGGGCCATGAAACAGACCAGCAGGCCCTCACACCCTaGGTGGCACGTCCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: QLGLFAFALDSKGHETDQQALTP*VARPRL
Trigger: GAGCCTGGGACGTGCCACCCAGGGTGTGAGGGCCTG...CTGGTCTGTTTCATGGCCCTTACTGTCCAGTGCAAAGGCAAACAGGCCTAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR CCA 90 bp GCAAAGGGTGTTCTGGGAGTGCCCGGCTACCTCTGCACTCCATTTTGCCCCATGAGCTCCAGATGGCCTTaGGCAGCTGCCCTGACTTGC +
Preference number: 4 (lower is better)
Translates to: AKGVLGVPGYLCTPFCPMSSRWP*AAALTC
Trigger: GCAAGTCAGGGCAGCTGCCCAAGGCCATCTGGAGCT...CATGGGGCAAAATGGAGTGCAGAGGTAGCCGGGCACTCCCAGAACACCCTTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR TCA 90 bp CAGCTAGGCCTGTTTGCCTTTGCACTGGACAGTAAGGGCCATGAAACAGACCAGTGCGTCTGGCCCACGTaGCTGCCAGCCCCAGACACA +
Preference number: 4 (lower is better)
Translates to: QLGLFAFALDSKGHETDQCVWPT*LPAPDT
Trigger: TGTGTCTGGGGCTGGCAGTCACGTGGGCCAGACGCA...CTGGTCTGTTTCATGGCCCTTACTGTCCAGTGCAAAGGCAAACAGGCCTAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR TCA 90 bp ACACAGAGCCCCCATCTGCCGTGGAAGGCTCTGGGCAGCGATGACACTGACAGATGTGTTCCGAAGTTGTaGGTCCTTCCATGCCGGGAC +
Preference number: 4 (lower is better)
Translates to: TQSPHLPWKALGSDDTDRCVPKL*VLPCRD
Trigger: GTCCCGGCATGGAAGGACTCACAACTTCGGAACACA...TCTGTCAGTGTCATCGCTGCCCAGAGCCTTCCACGGCAGATGGGGGCTCTGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR GCA 90 bp TCAGGAGGGCATCCTGACAGCCCCATTTGCAATAGCAAAGCCACACCGAGGAGCGTCGCCTCCGGGAAATaGCCTAAAAGGCGACGAGCC +
Preference number: 4 (lower is better)
Translates to: SGGHPDSPICNSKATPRSVASGK*PKRRRA
Trigger: GGCTCGTCGCCTTTTAGGGCATTTCCCGGAGGCGAC...GCTCCTCGGTGTGGCTTTGCTATTGCAAATGGGGCTGTCAGGATGCCCTCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR GCA 90 bp CCACCCGGCCCCCAAGCTCTAGCTTATGTGTTCCGAAGTTGTGAGTCCTTCCATAGGCAGCCCCGTTGTTaGCGAGCCAGGACGGGTTCT +
Preference number: 4 (lower is better)
Translates to: PPGPQALAYVFRSCESFHRQPRC*RARTGS
Trigger: AGAACCCGTCCTGGCTCGGCAACAACGGGGCTGCCT...ATGGAAGGACTCACAACTTCGGAACACATAAGCTAGAGCTTGGGGGCCGGGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR GCA 90 bp TCAGGAGGGCATCCTGACAGCCCCATTTGCAATAGCAAAGCCACACCGAGGAGCCTGCTCCAAACAGGCTaGCCATGTGCGTCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: SGGHPDSPICNSKATPRSLLQTG*PCASGP
Trigger: TGGGCCAGACGCACATGGGCAGCCTGTTTGGAGCAG...GCTCCTCGGTGTGGCTTTGCTATTGCAAATGGGGCTGTCAGGATGCCCTCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR GCA 90 bp CCACCCGGCCCCCAAGCTCTAGCTTATGTGTTCCGAAGTTGTGAGTCCTTCCATCAGCTTTTGACCCTCTaGCACCCGGCCCCCAAGCTC +
Preference number: 4 (lower is better)
Translates to: PPGPQALAYVFRSCESFHQLLTL*HPAPKL
Trigger: GAGCTTGGGGGCCGGGTGGCAGAGGGTCAAAAGCTG...ATGGAAGGACTCACAACTTCGGAACACATAAGCTAGAGCTTGGGGGCCGGGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR GCA 90 bp GGCGCCTTGGCCCCAGCAGGTCGGATTCCGTGTGCTTTCAGGGAGAGAAAGATGATGGCCTTGGGCAGCTaGCCTGACTTGCTCAGTCAT +
Preference number: 4 (lower is better)
Translates to: GALAPAGRIPCAFRERKMMALGS*PDLLSH
Trigger: ATGACTGAGCAAGTCAGGGCAGCTGCCCAAGGCCAT...CATCTTTCTCTCCCTGAAAGCACACGGAATCCGACCTGCTGGGGCCAAGGCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR CCA 90 bp TCAGGAGGGCATCCTGACAGCCCCATTTGCAATAGCAAAGCCACACCGAGGAGCGGCCCGTGTCTCCCCTaGGGACTGGCATTGCTAGAT +
Preference number: 4 (lower is better)
Translates to: SGGHPDSPICNSKATPRSGPCLP*GLALLD
Trigger: ATCTAGCAATGCCAGTCCCCAGGGGAGACACGGGCC...GCTCCTCGGTGTGGCTTTGCTATTGCAAATGGGGCTGTCAGGATGCCCTCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR CCA 90 bp GAGGGCAGTAGCAGCACCTTAGTGTCAAGCCTTGCCATGCTGAGACCTGTGCCCAGCCTCCCTCAGGTCTaGCTCCTCCCCTATAGTGTC +
Preference number: 4 (lower is better)
Translates to: EGSSSTLVSSLAMLRPVPSLPQV*LLPYSV
Trigger: GACACTATAGGGGAGGAGCCAGACCTGAGGGAGGCT...GGGCACAGGTCTCAGCATGGCAAGGCTTGACACTAAGGTGCTGCTACTGCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR CCA 90 bp AGCAGACGCATGGAGGAACTGAGTGCCGGGGGCCACTGCGGAAGAGCCCCCTTAGATTTTGGGGGAGTCTaGGTCATTTCAGCGAACCTC +
Preference number: 4 (lower is better)
Translates to: SRRMEELSAGGHCGRAPLDFGGV*VISANL
Trigger: GAGGTTCGCTGAAATGACCCAGACTCCCCCAAAATC...TAAGGGGGCTCTTCCGCAGTGGCCCCCGGCACTCAGTTCCTCCATGCGTCTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR CCA 90 bp ACACAGAGCCCCCATCTGCCGTGGAAGGCTCTGGGCAGCGATGACACTGACAGAAGTAGTGCTGGCATCTaGAGGGCAGTAGCAGCACCT +
Preference number: 4 (lower is better)
Translates to: TQSPHLPWKALGSDDTDRSSAGI*RAVAAP
Trigger: AGGTGCTGCTACTGCCCTCCAGATGCCAGCACTACT...TCTGTCAGTGTCATCGCTGCCCAGAGCCTTCCACGGCAGATGGGGGCTCTGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR CCA 90 bp ACCCCAGAGACCCTCATTCAACAACACCAAGTTTACCCTCCGCCCAACCCAGGACGTGCTTCCCGAAGCTaGAGGCACGGTAGTGAGCGC +
Preference number: 4 (lower is better)
Translates to: TPETLIQQHQVYPPPNPGRASRS*RHGSER
Trigger: GCGCTCACTACCGTGCCTCCAGCTTCGGGAAGCACG...TCCTGGGTTGGGCGGAGGGTAAACTTGGTGTTGTTGAATGAGGGTCTCTGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR CCA 90 bp GGCGCCTTGGCCCCAGCAGGTCGGATTCCGTGTGCTTTCAGGGAGAGAAAGATGGTCTTTGAGCTAACCTaGCCACCGTGCTTCCCGAAG +
Preference number: 4 (lower is better)
Translates to: GALAPAGRIPCAFRERKMVFELT*PPCFPK
Trigger: CTTCGGGAAGCACGGTGGCCAGGTTAGCTCAAAGAC...CATCTTTCTCTCCCTGAAAGCACACGGAATCCGACCTGCTGGGGCCAAGGCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR TCA 90 bp TTCTTCCTTTCCCTGGCTAGATTTTGGGGGAGTCTGGGTCATTTCAGCGAACCTGCAGGCTGGCACTGGTaGGGCAGCCCCGTTGTTGCC +
Preference number: 4 (lower is better)
Translates to: FFLSLARFWGSLGHFSEPAGWHW*GSPVVA
Trigger: GGCAACAACGGGGCTGCCTCACCAGTGCCAGCCTGC...AGGTTCGCTGAAATGACCCAGACTCCCCCAAAATCTAGCCAGGGAAAGGAAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR GCA 90 bp ACACAGAGCCCCCATCTGCCGTGGAAGGCTCTGGGCAGCGATGACACTGACAGAAAGTGGGTTCGAACCTaGTGCATCTGCCCAAAACGC +
Preference number: 4 (lower is better)
Translates to: TQSPHLPWKALGSDDTDRKWVRT*CICPKR
Trigger: GCGTTTTGGGCAGATGCAGCAGGTTCGAACCCACTT...TCTGTCAGTGTCATCGCTGCCCAGAGCCTTCCACGGCAGATGGGGGCTCTGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR GCA 90 bp CCACCCGGCCCCCAAGCTCTAGCTTATGTGTTCCGAAGTTGTGAGTCCTTCCATTGGGCTGAGGCTGGCTaGTCCAAACAGGCTGCCCAT +
Preference number: 4 (lower is better)
Translates to: PPGPQALAYVFRSCESFHWAEAG*SKQAAH
Trigger: ATGGGCAGCCTGTTTGGAGCAGCCAGCCTCAGCCCA...ATGGAAGGACTCACAACTTCGGAACACATAAGCTAGAGCTTGGGGGCCGGGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR GCA 90 bp GGCTGTCAGTGTGGGGAGGCTGCCCATCCATCTGCCGGCTACCCACGACTTTATTCCTCTAGCAAAGCCTaGACGCAGCTTTTGACCCTC +
Preference number: 4 (lower is better)
Translates to: GCQCGEAAHPSAGYPRLYSSSKA*TQLLTL
Trigger: GAGGGTCAAAAGCTGCGTGCAGGCTTTGCTAGAGGA...ATAAAGTCGTGGGTAGCCGGCAGATGGATGGGCAGCCTCCCCACACTGACAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR CCA 90 bp CAGCTAGGCCTGTTTGCCTTTGCACTGGACAGTAAGGGCCATGAAACAGACCAGGGGGCCTGGAAAACATaGGCGTGGCCCATGGTGTCC +
Preference number: 4 (lower is better)
Translates to: QLGLFAFALDSKGHETDQGAWKT*AWPMVS
Trigger: GGACACCATGGGCCACGCCCATGTTTTCCAGGCCCC...CTGGTCTGTTTCATGGCCCTTACTGTCCAGTGCAAAGGCAAACAGGCCTAGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR CCA 90 bp GGCGCCTTGGCCCCAGCAGGTCGGATTCCGTGTGCTTTCAGGGAGAGAAAGATGGAGTCCTGGTCCCTGTaGAAGAAGTGTAAGGACGGA +
Preference number: 4 (lower is better)
Translates to: GALAPAGRIPCAFRERKMESWSL*KKCKDG
Trigger: TCCGTCCTTACACTTCTTCCACAGGGACCAGGACTC...CATCTTTCTCTCCCTGAAAGCACACGGAATCCGACCTGCTGGGGCCAAGGCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR CCA 90 bp AGCAGACGCATGGAGGAACTGAGTGCCGGGGGCCACTGCGGAAGAGCCCCCTTAGTCCTGATTCTCTCATaGGTGAGAAAGACCCAAGGT +
Preference number: 4 (lower is better)
Translates to: SRRMEELSAGGHCGRAPLVLILS*VRKTQG
Trigger: ACCTTGGGTCTTTCTCACCCATGAGAGAATCAGGAC...TAAGGGGGCTCTTCCGCAGTGGCCCCCGGCACTCAGTTCCTCCATGCGTCTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR CCA 90 bp ACCCCAGAGACCCTCATTCAACAACACCAAGTTTACCCTCCGCCCAACCCAGGAGATGGGGCACGGAGCTaGGTCCAGTGTGATCACAGC +
Preference number: 4 (lower is better)
Translates to: TPETLIQQHQVYPPPNPGDGARS*VQCDHS
Trigger: GCTGTGATCACACTGGACCCAGCTCCGTGCCCCATC...TCCTGGGTTGGGCGGAGGGTAAACTTGGTGTTGTTGAATGAGGGTCTCTGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR TCA 90 bp TCAGGAGGGCATCCTGACAGCCCCATTTGCAATAGCAAAGCCACACCGAGGAGCTCATGGATGCGAAGCTaGAAAACGTGGCCACCTGGC +
Preference number: 4 (lower is better)
Translates to: SGGHPDSPICNSKATPRSSWMRS*KTWPPG
Trigger: GCCAGGTGGCCACGTTTTTCAGCTTCGCATCCATGA...GCTCCTCGGTGTGGCTTTGCTATTGCAAATGGGGCTGTCAGGATGCCCTCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR TCA 90 bp CAGCTAGGCCTGTTTGCCTTTGCACTGGACAGTAAGGGCCATGAAACAGACCAGGGAGGACAGTCAGTTTaGGGCCATAGCAGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: QLGLFAFALDSKGHETDQGGQSV*GHSRAW
Trigger: CCAGGCCCTGCTATGGCCTCAAACTGACTGTCCTCC...CTGGTCTGTTTCATGGCCCTTACTGTCCAGTGCAAAGGCAAACAGGCCTAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR TCA 90 bp TGGGCAGCTGCCCTGACTTGCTCAGTCATCCTAGGAGCTGACACGGCAGTGGCCATCCTTCCTCAGCCATaGGCATTTCAGAAGGAAAGG +
Preference number: 4 (lower is better)
Translates to: WAAALTCSVILGADTAVAILPQP*AFQKER
Trigger: CCTTTCCTTCTGAAATGCTCATGGCTGAGGAAGGAT...GGCCACTGCCGTGTCAGCTCCTAGGATGACTGAGCAAGTCAGGGCAGCTGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR TCA 90 bp GGCTGTCAGTGTGGGGAGGCTGCCCATCCATCTGCCGGCTACCCACGACTTTATGAGAAAGACCCAAGGTaGAAGTTCCTTCCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: GCQCGEAAHPSAGYPRLYEKDPR*KFLPSP
Trigger: TGGGGAAGGAAGGAACTTTCACCTTGGGTCTTTCTC...ATAAAGTCGTGGGTAGCCGGCAGATGGATGGGCAGCCTCCCCACACTGACAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR GCA 90 bp CCACCCGGCCCCCAAGCTCTAGCTTATGTGTTCCGAAGTTGTGAGTCCTTCCATAAGTCTCAGCATTCATaGCTGGCTTGCGCAGGCGGC +
Preference number: 4 (lower is better)
Translates to: PPGPQALAYVFRSCESFHKSQHS*LACAGG
Trigger: GCCGCCTGCGCAAGCCAGGCATGAATGCTGAGACTT...ATGGAAGGACTCACAACTTCGGAACACATAAGCTAGAGCTTGGGGGCCGGGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR GCA 90 bp TGTCATCCTCTGCCCACTCTCTCCAGGTGTATCCAGCCTAGGGGACAGCCAGGAGCTTCTTGCCCTTGTTaGTCTCTGAGTCGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: CHPLPTLSRCIQPRGQPGASCPC*SLSRPS
Trigger: AGAAGGCCGACTCAGAGAGCAACAAGGGCAAGAAGC...TCCTGGCTGTCCCCTAGGCTGGATACACCTGGAGAGAGTGGGCAGAGGATGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR GCA 90 bp GAGGGCAGTAGCAGCACCTTAGTGTCAAGCCTTGCCATGCTGAGACCTGTGCCCCCTGACAGCCCCATTTaGAATAGCAAAGCCACACCG +
Preference number: 4 (lower is better)
Translates to: EGSSSTLVSSLAMLRPVPPDSPI*NSKATP
Trigger: CGGTGTGGCTTTGCTATTGCAAATGGGGCTGTCAGG...GGGCACAGGTCTCAGCATGGCAAGGCTTGACACTAAGGTGCTGCTACTGCCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR GCA 90 bp TCAGGAGGGCATCCTGACAGCCCCATTTGCAATAGCAAAGCCACACCGAGGAGCGCAGCTGCCCTGACTTaGTCAGTCATCCTAGGAGCT +
Preference number: 4 (lower is better)
Translates to: SGGHPDSPICNSKATPRSAAALT*SVILGA
Trigger: AGCTCCTAGGATGACTGAGCAAGTCAGGGCAGCTGC...GCTCCTCGGTGTGGCTTTGCTATTGCAAATGGGGCTGTCAGGATGCCCTCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR GCA 90 bp ACACAGAGCCCCCATCTGCCGTGGAAGGCTCTGGGCAGCGATGACACTGACAGACAGGGAGGGAATGACTaGATAAGCAGGGTACGTAGT +
Preference number: 4 (lower is better)
Translates to: TQSPHLPWKALGSDDTDRQGGND*ISRVRS
Trigger: ACTACGTACCCTGCTTATGCAGTCATTCCCTCCCTG...TCTGTCAGTGTCATCGCTGCCCAGAGCCTTCCACGGCAGATGGGGGCTCTGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR CCA 90 bp CTTTCAGCTTATCATGGATGCGAAGCTGAAAAACGTGGCCACCTGGCTTTCTCCTGTAGTAGGCGTCCATaGCAGCGGCCGGCGACTCGC +
Preference number: 4 (lower is better)
Translates to: LSAYHGCEAEKRGHLAFSCSRRP*QRPATR
Trigger: GCGAGTCGCCGGCCGCTGCCATGGACGCCTACTACA...GGAGAAAGCCAGGTGGCCACGTTTTTCAGCTTCGCATCCATGATAAGCTGAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR CCA 90 bp CCACCCGGCCCCCAAGCTCTAGCTTATGTGTTCCGAAGTTGTGAGTCCTTCCATGTCGACGGCTGGGGCTaGAACTTGTTAAAGGAGCCC +
Preference number: 4 (lower is better)
Translates to: PPGPQALAYVFRSCESFHVDGWG*NLLKEP
Trigger: GGGCTCCTTTAACAAGTTCCAGCCCCAGCCGTCGAC...ATGGAAGGACTCACAACTTCGGAACACATAAGCTAGAGCTTGGGGGCCGGGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR CCA 90 bp GAGGGCAGTAGCAGCACCTTAGTGTCAAGCCTTGCCATGCTGAGACCTGTGCCCAAAAACGTGGCCACCTaGCTTTCTCCACTGCCTGTG +
Preference number: 4 (lower is better)
Translates to: EGSSSTLVSSLAMLRPVPKNVAT*LSPLPV
Trigger: CACAGGCAGTGGAGAAAGCCAGGTGGCCACGTTTTT...GGGCACAGGTCTCAGCATGGCAAGGCTTGACACTAAGGTGCTGCTACTGCCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR CCA 90 bp TTCTTCCTTTCCCTGGCTAGATTTTGGGGGAGTCTGGGTCATTTCAGCGAACCTGGCCATAGCAGGGCCTaGAGGCCGAGCATGGCCACA +
Preference number: 4 (lower is better)
Translates to: FFLSLARFWGSLGHFSEPGHSRA*RPSMAT
Trigger: TGTGGCCATGCTCGGCCTCCAGGCCCTGCTATGGCC...AGGTTCGCTGAAATGACCCAGACTCCCCCAAAATCTAGCCAGGGAAAGGAAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR CCA 90 bp CCACCCGGCCCCCAAGCTCTAGCTTATGTGTTCCGAAGTTGTGAGTCCTTCCATTGCCGTGGAAGGCTCTaGGCAGCGATGACACTGACA +
Preference number: 4 (lower is better)
Translates to: PPGPQALAYVFRSCESFHCRGRL*AAMTLT
Trigger: TGTCAGTGTCATCGCTGCCCAGAGCCTTCCACGGCA...ATGGAAGGACTCACAACTTCGGAACACATAAGCTAGAGCTTGGGGGCCGGGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR CCA 90 bp TGGGCAGCTGCCCTGACTTGCTCAGTCATCCTAGGAGCTGACACGGCAGTGGCCTGTAAGGACGGAGTGTaGAAAGCTGTGTGGAGAAGA +
Preference number: 4 (lower is better)
Translates to: WAAALTCSVILGADTAVACKDGV*KAVWRR
Trigger: TCTTCTCCACACAGCTTTCCACACTCCGTCCTTACA...GGCCACTGCCGTGTCAGCTCCTAGGATGACTGAGCAAGTCAGGGCAGCTGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR CCA 90 bp ACAGGCCTGCCTCTGGACGGTTACTGTGTACTCCCAGCTGAGGTGAGGGCTGGGAGTTCTTCCTTTCCCTaGCTAGATTTTGGGGGAGTC +
Preference number: 4 (lower is better)
Translates to: TGLPLDGYCVLPAEVRAGSSSFP*LDFGGV
Trigger: GACTCCCCCAAAATCTAGCCAGGGAAAGGAAGAACT...CCCAGCCCTCACCTCAGCTGGGAGTACACAGTAACCGTCCAGAGGCAGGCCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR CCA 90 bp TCAGTGTGGGGAGGCTGCCCATCCATCTGCCGGCTACCCACGACTTTATTTTTACTTAGTGTGGTTAGGTaGCCCCCAAGGGCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: SVWGGCPSICRLPTTLFLLSVVR*PPRAGP
Trigger: TGGCCCAGCCCTTGGGGGCCACCTAACCACACTAAG...TAAAAATAAAGTCGTGGGTAGCCGGCAGATGGATGGGCAGCCTCCCCACACTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR CCA 90 bp GGCTGTCAGTGTGGGGAGGCTGCCCATCCATCTGCCGGCTACCCACGACTTTATCTATCATACTTAGTGTaGTTAGGTGGCCCCCAAGGG +
Preference number: 4 (lower is better)
Translates to: GCQCGEAAHPSAGYPRLYLSYLV*LGGPQG
Trigger: CCCTTGGGGGCCACCTAACCACACTAAGTATGATAG...ATAAAGTCGTGGGTAGCCGGCAGATGGATGGGCAGCCTCCCCACACTGACAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR CCA 90 bp GCAAAGGGTGTTCTGGGAGTGCCCGGCTACCTCTGCACTCCATTTTGCCCCATGTGTCTTGGAAGGGACTaGGCCCCAAGGTTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: AKGVLGVPGYLCTPFCPMCLGRD*APRFSS
Trigger: AGAAGAGAACCTTGGGGCCCAGTCCCTTCCAAGACA...CATGGGGCAAAATGGAGTGCAGAGGTAGCCGGGCACTCCCAGAACACCCTTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR CCA 90 bp ACCCCAGAGACCCTCATTCAACAACACCAAGTTTACCCTCCGCCCAACCCAGGAAGCTTTAGCTCCAGATaGCCTTGGGCAGCTGCCCTG +
Preference number: 4 (lower is better)
Translates to: TPETLIQQHQVYPPPNPGSFSSR*PWAAAL
Trigger: CAGGGCAGCTGCCCAAGGCCATCTGGAGCTAAAGCT...TCCTGGGTTGGGCGGAGGGTAAACTTGGTGTTGTTGAATGAGGGTCTCTGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR CAA 72 bp CCAGGACCTTTCCTTCTTCTAGCACCATGGGAGCCCTaGTGGCATCTGTGTTCTCAGCCTCCCTCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: PGPFLLLAPWEP*WHLCSQPPSGL
Trigger: CAGACCTGAGGGAGGCTGAGAACACAGATGCCACAAGGGCTCCCATGGTGCTAGAAGAAGGAAAGGTCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR TCA 90 bp GCAAAGGGTGTTCTGGGAGTGCCCGGCTACCTCTGCACTCCATTTTGCCCCATGGTTCACAAAGAGGTCTaGCTCATTAAGGGAGGCCAC +
Preference number: 4 (lower is better)
Translates to: AKGVLGVPGYLCTPFCPMVHKEV*LIKGGH
Trigger: GTGGCCTCCCTTAATGAGTCAGACCTCTTTGTGAAC...CATGGGGCAAAATGGAGTGCAGAGGTAGCCGGGCACTCCCAGAACACCCTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR TCA 90 bp CCACCCGGCCCCCAAGCTCTAGCTTATGTGTTCCGAAGTTGTGAGTCCTTCCATCTCCACCTGCCTTCATaGGCTTTAGCTCCAGATGGC +
Preference number: 4 (lower is better)
Translates to: PPGPQALAYVFRSCESFHLHLPS*ALAPDG
Trigger: GCCATCTGGAGCTAAAGCTCATGAAGGCAGGTGGAG...ATGGAAGGACTCACAACTTCGGAACACATAAGCTAGAGCTTGGGGGCCGGGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR TCA 90 bp CTTTCAGCTTATCATGGATGCGAAGCTGAAAAACGTGGCCACCTGGCTTTCTCCCAAGCCTTGCCATGCTaGGACCTGTGCCCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: LSAYHGCEAEKRGHLAFSQALPC*DLCPAG
Trigger: CCCTGCTGGGCACAGGTCTCAGCATGGCAAGGCTTG...GGAGAAAGCCAGGTGGCCACGTTTTTCAGCTTCGCATCCATGATAAGCTGAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR GCA 90 bp CCACCCGGCCCCCAAGCTCTAGCTTATGTGTTCCGAAGTTGTGAGTCCTTCCATTGGGTTCGAACCTGCTaGATCTGCCCAAAACGCTCC +
Preference number: 4 (lower is better)
Translates to: PPGPQALAYVFRSCESFHWVRTC*ICPKRS
Trigger: GGAGCGTTTTGGGCAGATGCAGCAGGTTCGAACCCA...ATGGAAGGACTCACAACTTCGGAACACATAAGCTAGAGCTTGGGGGCCGGGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR GCA 90 bp ACCCCAGAGACCCTCATTCAACAACACCAAGTTTACCCTCCGCCCAACCCAGGAGAGGGGCAGCTCATATaGAGTGGAGAAGTGGGTTCG +
Preference number: 4 (lower is better)
Translates to: TPETLIQQHQVYPPPNPGEGQLI*SGEVGS
Trigger: CGAACCCACTTCTCCACTGCATATGAGCTGCCCCTC...TCCTGGGTTGGGCGGAGGGTAAACTTGGTGTTGTTGAATGAGGGTCTCTGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR GCA 90 bp CTTTCAGCTTATCATGGATGCGAAGCTGAAAAACGTGGCCACCTGGCTTTCTCCGCAGGAGGCTGGCTCTaGAGGGCAGCCTGTGCTTCA +
Preference number: 4 (lower is better)
Translates to: LSAYHGCEAEKRGHLAFSAGGWL*RAACAS
Trigger: TGAAGCACAGGCTGCCCTGCAGAGCCAGCCTCCTGC...GGAGAAAGCCAGGTGGCCACGTTTTTCAGCTTCGCATCCATGATAAGCTGAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR GCA 90 bp CCACCCGGCCCCCAAGCTCTAGCTTATGTGTTCCGAAGTTGTGAGTCCTTCCATGATGGAGAACAAAGCTaGCCAGACCTCCCCGCTGTA +
Preference number: 4 (lower is better)
Translates to: PPGPQALAYVFRSCESFHDGEQS*PDLPAV
Trigger: TACAGCGGGGAGGTCTGGGCAGCTTTGTTCTCCATC...ATGGAAGGACTCACAACTTCGGAACACATAAGCTAGAGCTTGGGGGCCGGGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR GCA 90 bp TCAGGAGGGCATCCTGACAGCCCCATTTGCAATAGCAAAGCCACACCGAGGAGCCTTAGTGTCAAGCCTTaGCATGCTGAGACCTGTGCC +
Preference number: 4 (lower is better)
Translates to: SGGHPDSPICNSKATPRSLSVKP*HAETCA
Trigger: GGCACAGGTCTCAGCATGGCAAGGCTTGACACTAAG...GCTCCTCGGTGTGGCTTTGCTATTGCAAATGGGGCTGTCAGGATGCCCTCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR CCA 90 bp AAGGGAGAAGGTAGAAAAGGCGAGCGCTTCAATGCGGGGCGCTGCCTGCTGGAGGCTGCTGGGTCTGCATaGAAATCTAGCATTGACTCA +
Preference number: 4 (lower is better)
Translates to: KGEGRKGERFNAGRCLLEAAGSA*KSSIDS
Trigger: TGAGTCAATGCTAGATTTCCATGCAGACCCAGCAGC...CTCCAGCAGGCAGCGCCCCGCATTGAAGCGCTCGCCTTTTCTACCTTCTCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR CCA 90 bp AGCTCCAGATGGCCTTGGGCAGCTGCCCTGACTTGCTCAGTCATCCTAGGAGCTGTGTGGAAAGCTGTGTaGAGAAGAGCAACACCTCCT +
Preference number: 4 (lower is better)
Translates to: SSRWPWAAALTCSVILGAVWKAV*RRATPP
Trigger: AGGAGGTGTTGCTCTTCTCCACACAGCTTTCCACAC...AGCTCCTAGGATGACTGAGCAAGTCAGGGCAGCTGCCCAAGGCCATCTGGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR CCA 90 bp GGCGCCTTGGCCCCAGCAGGTCGGATTCCGTGTGCTTTCAGGGAGAGAAAGATGCACAGAGTATTATCCTaGGGGCCAGTTTACCAACCA +
Preference number: 4 (lower is better)
Translates to: GALAPAGRIPCAFRERKMHRVLS*GPVYQP
Trigger: TGGTTGGTAAACTGGCCCCCAGGATAATACTCTGTG...CATCTTTCTCTCCCTGAAAGCACACGGAATCCGACCTGCTGGGGCCAAGGCGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR CCA 90 bp CAGCTAGGCCTGTTTGCCTTTGCACTGGACAGTAAGGGCCATGAAACAGACCAGCAGCAAAGGGTGTTCTaGGAGTGCCCGGCTACCTCT +
Preference number: 4 (lower is better)
Translates to: QLGLFAFALDSKGHETDQQQRVF*ECPATS
Trigger: AGAGGTAGCCGGGCACTCCCAGAACACCCTTTGCTG...CTGGTCTGTTTCATGGCCCTTACTGTCCAGTGCAAAGGCAAACAGGCCTAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR GCA 90 bp CTTTCAGCTTATCATGGATGCGAAGCTGAAAAACGTGGCCACCTGGCTTTCTCCTCAGTGTGGGGAGGCTaGCCATCCATCTGCCGGCTA +
Preference number: 4 (lower is better)
Translates to: LSAYHGCEAEKRGHLAFSSVWGG*PSICRL
Trigger: TAGCCGGCAGATGGATGGGCAGCCTCCCCACACTGA...GGAGAAAGCCAGGTGGCCACGTTTTTCAGCTTCGCATCCATGATAAGCTGAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR CCA 90 bp TCAGGAGGGCATCCTGACAGCCCCATTTGCAATAGCAAAGCCACACCGAGGAGCTATGCAGTGGAGAAGTaGGTTCGAACCTGCTGCATC +
Preference number: 4 (lower is better)
Translates to: SGGHPDSPICNSKATPRSYAVEK*VRTCCI
Trigger: GATGCAGCAGGTTCGAACCCACTTCTCCACTGCATA...GCTCCTCGGTGTGGCTTTGCTATTGCAAATGGGGCTGTCAGGATGCCCTCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR CCA 90 bp CAGCTAGGCCTGTTTGCCTTTGCACTGGACAGTAAGGGCCATGAAACAGACCAGCCATGGGAGCCCTTGTaGCATCTGTGTTCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: QLGLFAFALDSKGHETDQPWEPL*HLCSQP
Trigger: AGGCTGAGAACACAGATGCCACAAGGGCTCCCATGG...CTGGTCTGTTTCATGGCCCTTACTGTCCAGTGCAAAGGCAAACAGGCCTAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR CCA 90 bp AGCTCCAGATGGCCTTGGGCAGCTGCCCTGACTTGCTCAGTCATCCTAGGAGCTGTGCTATTTCAGCCTTaGAGACAAGCCTCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: SSRWPWAAALTCSVILGAVLFQP*RQASLC
Trigger: ACACAGAGAGGCTTGTCTCCAAGGCTGAAATAGCAC...AGCTCCTAGGATGACTGAGCAAGTCAGGGCAGCTGCCCAAGGCCATCTGGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR CCA 90 bp ACCCCAGAGACCCTCATTCAACAACACCAAGTTTACCCTCCGCCCAACCCAGGAGCCGAGGTTAGGTCATaGAAGCACCTTTCCTCCCTA +
Preference number: 4 (lower is better)
Translates to: TPETLIQQHQVYPPPNPGAEVRS*KHLSSL
Trigger: TAGGGAGGAAAGGTGCTTCCATGACCTAACCTCGGC...TCCTGGGTTGGGCGGAGGGTAAACTTGGTGTTGTTGAATGAGGGTCTCTGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652299.1
3UTR CAA 72 bp CTGGTGAGGCTGCTGGGTCTGCATGGAAATCTAGCATaGACTCATGGTCAACTAGGCAGAGCAGAGGAGTGG +
Preference number: 4 (lower is better)
Translates to: LVRLLGLHGNLA*THGQLGRAEEW
Trigger: CCACTCCTCTGCTCTGCCTAGTTGACCATGAGTCAATGCTAGATTTCCATGCAGACCCAGCAGCCTCACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR TCA 90 bp GGCTGTCAGTGTGGGGAGGCTGCCCATCCATCTGCCGGCTACCCACGACTTTATCACGGTAGTGAGCGCTaGGAATCAAGTATAGTTAAA +
Preference number: 4 (lower is better)
Translates to: GCQCGEAAHPSAGYPRLYHGSER*ESSIVK
Trigger: TTTAACTATACTTGATTCTCAGCGCTCACTACCGTG...ATAAAGTCGTGGGTAGCCGGCAGATGGATGGGCAGCCTCCCCACACTGACAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR GCA 90 bp CTTTCAGCTTATCATGGATGCGAAGCTGAAAAACGTGGCCACCTGGCTTTCTCCCTCTGCACTCCATTTTaGCCCATGCCTGGGCCCCTA +
Preference number: 4 (lower is better)
Translates to: LSAYHGCEAEKRGHLAFSLCTPF*PMPGPL
Trigger: TAGGGGCCCAGGCATGGGGCAAAATGGAGTGCAGAG...GGAGAAAGCCAGGTGGCCACGTTTTTCAGCTTCGCATCCATGATAAGCTGAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR CCA 90 bp AGCTCCAGATGGCCTTGGGCAGCTGCCCTGACTTGCTCAGTCATCCTAGGAGCTTCTAGCATTGACTCATaGTCAACTAGGCAGAGCAGA +
Preference number: 4 (lower is better)
Translates to: SSRWPWAAALTCSVILGASSIDS*STRQSR
Trigger: TCTGCTCTGCCTAGTTGACCATGAGTCAATGCTAGA...AGCTCCTAGGATGACTGAGCAAGTCAGGGCAGCTGCCCAAGGCCATCTGGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR CCA 90 bp TGTCATCCTCTGCCCACTCTCTCCAGGTGTATCCAGCCTAGGGGACAGCCAGGATGTTTGCCTTTGCACTaGACAGTAAGGGCCATGAAA +
Preference number: 4 (lower is better)
Translates to: CHPLPTLSRCIQPRGQPGCLPLH*TVRAMK
Trigger: TTTCATGGCCCTTACTGTCCAGTGCAAAGGCAAACA...TCCTGGCTGTCCCCTAGGCTGGATACACCTGGAGAGAGTGGGCAGAGGATGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR TCA 90 bp CCACCCGGCCCCCAAGCTCTAGCTTATGTGTTCCGAAGTTGTGAGTCCTTCCATAGTTGCCATCTCTGTTaGGATCTTAGGCAGGTATCC +
Preference number: 4 (lower is better)
Translates to: PPGPQALAYVFRSCESFHSCHLC*DLRQVS
Trigger: GGATACCTGCCTAAGATCTCAACAGAGATGGCAACT...ATGGAAGGACTCACAACTTCGGAACACATAAGCTAGAGCTTGGGGGCCGGGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR GCA 90 bp CCACCCGGCCCCCAAGCTCTAGCTTATGTGTTCCGAAGTTGTGAGTCCTTCCATAGGTCGGATTCCGTGTaGTTTCAGGGAGAGAAAGAT +
Preference number: 4 (lower is better)
Translates to: PPGPQALAYVFRSCESFHRSDSV*FQGEKD
Trigger: ATCTTTCTCTCCCTGAAAGCACACGGAATCCGACCT...ATGGAAGGACTCACAACTTCGGAACACATAAGCTAGAGCTTGGGGGCCGGGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR CCA 90 bp GATGAACAGGAATGTTTCACATTGGCATGTTTAATCCTAGACACTTCCTGGGTGCCCTCACACCCTGGGTaGCACGTCCCAGGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: DEQECFTLACLILDTSWVPSHPG*HVPGSS
Trigger: AGAGGAGCCTGGGACGTGCCACCCAGGGTGTGAGGG...CACCCAGGAAGTGTCTAGGATTAAACATGCCAATGTGAAACATTCCTGTTCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR TCA 90 bp CCACCCGGCCCCCAAGCTCTAGCTTATGTGTTCCGAAGTTGTGAGTCCTTCCATCTCAAGCTTTTGGGTTaGAATTTGCCTGACTTGGGT +
Preference number: 4 (lower is better)
Translates to: PPGPQALAYVFRSCESFHLKLLG*NLPDLG
Trigger: ACCCAAGTCAGGCAAATTTCAACCCAAAAGCTTGAG...ATGGAAGGACTCACAACTTCGGAACACATAAGCTAGAGCTTGGGGGCCGGGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR GCA 90 bp GATGAACAGGAATGTTTCACATTGGCATGTTTAATCCTAGACACTTCCTGGGTGCATGGAGGAACTGAGTaGCGGGGGCCACTGCGGAAG +
Preference number: 4 (lower is better)
Translates to: DEQECFTLACLILDTSWVHGGTE*RGPLRK
Trigger: CTTCCGCAGTGGCCCCCGGCACTCAGTTCCTCCATG...CACCCAGGAAGTGTCTAGGATTAAACATGCCAATGTGAAACATTCCTGTTCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR GCA 90 bp GATGAACAGGAATGTTTCACATTGGCATGTTTAATCCTAGACACTTCCTGGGTGCTCACTCTCCCTCCCTaGCTGCTCTGGAGCTACCTG +
Preference number: 4 (lower is better)
Translates to: DEQECFTLACLILDTSWVLTLPP*LLWSYL
Trigger: CAGGTAGCTCCAGAGCAGGCAGGGAGGGAGAGTGAG...CACCCAGGAAGTGTCTAGGATTAAACATGCCAATGTGAAACATTCCTGTTCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR CCA 90 bp CTTTCAGCTTATCATGGATGCGAAGCTGAAAAACGTGGCCACCTGGCTTTCTCCGCAGCTCATATGCAGTaGAGAAGTGGGTTCGAACCT +
Preference number: 4 (lower is better)
Translates to: LSAYHGCEAEKRGHLAFSAAHMQ*RSGFEP
Trigger: AGGTTCGAACCCACTTCTCCACTGCATATGAGCTGC...GGAGAAAGCCAGGTGGCCACGTTTTTCAGCTTCGCATCCATGATAAGCTGAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR CCA 90 bp GATGAACAGGAATGTTTCACATTGGCATGTTTAATCCTAGACACTTCCTGGGTGCACAGAGGACAGGCCTaGGGTACGTGGCTGCCTTTG +
Preference number: 4 (lower is better)
Translates to: DEQECFTLACLILDTSWVHRGQA*GTWLPL
Trigger: CAAAGGCAGCCACGTACCCCAGGCCTGTCCTCTGTG...CACCCAGGAAGTGTCTAGGATTAAACATGCCAATGTGAAACATTCCTGTTCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR TCA 90 bp CAGCTAGGCCTGTTTGCCTTTGCACTGGACAGTAAGGGCCATGAAACAGACCAGCTGCCTTTGACGAGATaGACAGGAATGTTTCACATT +
Preference number: 4 (lower is better)
Translates to: QLGLFAFALDSKGHETDQLPLTR*TGMFHI
Trigger: AATGTGAAACATTCCTGTTCATCTCGTCAAAGGCAG...CTGGTCTGTTTCATGGCCCTTACTGTCCAGTGCAAAGGCAAACAGGCCTAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR TCA 90 bp GATGAACAGGAATGTTTCACATTGGCATGTTTAATCCTAGACACTTCCTGGGTGCCATCGCAGTGTCTTTaGGCTAACCTGGCCACCGTG +
Preference number: 4 (lower is better)
Translates to: DEQECFTLACLILDTSWVPSQCL*ANLATV
Trigger: CACGGTGGCCAGGTTAGCTCAAAGACACTGCGATGG...CACCCAGGAAGTGTCTAGGATTAAACATGCCAATGTGAAACATTCCTGTTCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR TCA 90 bp ACCCCAGAGACCCTCATTCAACAACACCAAGTTTACCCTCCGCCCAACCCAGGAGCACACCTAAACAGATaGTTAGACATTGAAAACTGT +
Preference number: 4 (lower is better)
Translates to: TPETLIQQHQVYPPPNPGAHLNR*LDIENC
Trigger: ACAGTTTTCAATGTCTAATCATCTGTTTAGGTGTGC...TCCTGGGTTGGGCGGAGGGTAAACTTGGTGTTGTTGAATGAGGGTCTCTGGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR GCA 90 bp TTCTTCCTTTCCCTGGCTAGATTTTGGGGGAGTCTGGGTCATTTCAGCGAACCTTCAGCTTATCATGGATaGGAAGCTGAAAAACGTGGC +
Preference number: 4 (lower is better)
Translates to: FFLSLARFWGSLGHFSEPSAYHG*EAEKRG
Trigger: GCCACGTTTTTCAGCTTCGCATCCATGATAAGCTGA...AGGTTCGCTGAAATGACCCAGACTCCCCCAAAATCTAGCCAGGGAAAGGAAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR CCA 90 bp ACTCCAAATCCTCAAATATTTGAAACACTTAAAGCCAAGCCTCCAAGAACATTTGTGCCCAGCAGGGACTaGAGGCTGTCAGTGTGGGGA +
Preference number: 4 (lower is better)
Translates to: TPNPQIFETLKAKPPRTFVPSRD*RLSVWG
Trigger: TCCCCACACTGACAGCCTCCAGTCCCTGCTGGGCAC...AAATGTTCTTGGAGGCTTGGCTTTAAGTGTTTCAAATATTTGAGGATTTGGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR GCA 90 bp ACTCCAAATCCTCAAATATTTGAAACACTTAAAGCCAAGCCTCCAAGAACATTTGTGCCCGGCTACCTCTaGACTCCATTTTGCCCCATG +
Preference number: 4 (lower is better)
Translates to: TPNPQIFETLKAKPPRTFVPGYL*TPFCPM
Trigger: CATGGGGCAAAATGGAGTGCAGAGGTAGCCGGGCAC...AAATGTTCTTGGAGGCTTGGCTTTAAGTGTTTCAAATATTTGAGGATTTGGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS GCA 90 bp CAGCGGCCGGCGACTCGCAGTAAGAGACGCAAGTCTCAGCATTCATaGCTGGCTTGCGCAGGCGGCGGGCGGGGACGCGAGCGAGGGCGC +
Preference number: 5 (lower is better)
Translates to: QRPATRSKRRKSQHS*LACAGGGRGRERGR
Trigger: GCGCCCTCGCTCGCGTCCCCGCCCGCCGCCTGCGCAAGCCAGGCATGAATGCTGAGACTTGCGTCTCTTACTGCGAGTCGCCGGCCGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS CCA 90 bp GGCCGGCGACTCGCAGTAAGAGACGCAAGTCTCAGCATTCATGCCTaGCTTGCGCAGGCGGCGGGCGGGGACGCGAGCGAGGGCGCGAGG +
Preference number: 5 (lower is better)
Translates to: GRRLAVRDASLSIHA*LAQAAGGDASEGAR
Trigger: CCTCGCGCCCTCGCTCGCGTCCCCGCCCGCCGCCTGCGCAAGCCAGGCATGAATGCTGAGACTTGCGTCTCTTACTGCGAGTCGCCGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR CAA 90 bp GGGGAGCTCCATGCAGCACCGGCCGCCCCTGGTGCCAACGAAGCCCAGGCCCTCCAAGTAAAGATGCGGTaGCGCGGGCGGCTGGGGCTG +
Preference number: 5 (lower is better)
Translates to: GELHAAPAAPGANEAQALQVKMR*RGRLGL
Trigger: CAGCCCCAGCCGCCCGCGCAACCGCATCTTTACTTG...GAGGGCCTGGGCTTCGTTGGCACCAGGGGCGGCCGGTGCTGCATGGAGCTCCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS CCA 90 bp GTGTCGCCAGGTCCTGCTGCCCAGCGCCGTAACGGGCCCGGCTCTTaGCGTCCCCGAATCCCTGTGCTTTGGCGGCGGCCGACAGGAAAG +
Preference number: 5 (lower is better)
Translates to: VSPGPAAQRRNGPGS*RPRIPVLWRRPTGK
Trigger: CTTTCCTGTCGGCCGCCGCCAAAGCACAGGGATTCGGGGACGCCAAGAGCCGGGCCCGTTACGGCGCTGGGCAGCAGGACCTGGCGACAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS TCA 90 bp GAACCTGCAAGGCCGCGCTGTGGCCGCTGCTGCCTTCCTGGAGTTTaGGGCTGCCGTCCGGGGGCGTCTTGCAGGCGCCTCGCTGCAAGT +
Preference number: 5 (lower is better)
Translates to: EPARPRCGRCCLPGV*GCRPGASCRRLAAS
Trigger: ACTTGCAGCGAGGCGCCTGCAAGACGCCCCCGGACGGCAGCCTCAAACTCCAGGAAGGCAGCAGCGGCCACAGCGCGGCCTTGCAGGTTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS TCA 90 bp GCAGGCAGGCACCGGGTCGCAGGGGACCACGCAGGCTGGCACTGGTaGGGCAGCCCCGTTGTTGCCGAGCCAGGACGGGTTCTGAATCTG +
Preference number: 5 (lower is better)
Translates to: AGRHRVAGDHAGWHW*GSPVVAEPGRVLNL
Trigger: CAGATTCAGAACCCGTCCTGGCTCGGCAACAACGGGGCTGCCTCACCAGTGCCAGCCTGCGTGGTCCCCTGCGACCCGGTGCCTGCCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR CAA 90 bp TGGCCACCTGGCTTTCTCCACTGCCTGTGGCCGGGAGCAGGGGTCAGGGCCTCAGCGATGCTCGAGGTCTaGCGGTCCGGCTCGCCGTTG +
Preference number: 5 (lower is better)
Translates to: WPPGFLHCLWPGAGVRASAMLEV*RSGSPL
Trigger: CAACGGCGAGCCGGACCGCAAGACCTCGAGCATCGC...TGAGGCCCTGACCCCTGCTCCCGGCCACAGGCAGTGGAGAAAGCCAGGTGGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS GCA 90 bp CCCAGCGCCGTAACGGGCCCGGCTCTTGGCGTCCCCGAATCCCTGTaGTTTGGCGGCGGCCGACAGGAAAGTTGTGCCGAACTTGTCGCC +
Preference number: 5 (lower is better)
Translates to: PSAVTGPALGVPESL*FGGGRQESCAELVA
Trigger: GGCGACAAGTTCGGCACAACTTTCCTGTCGGCCGCCGCCAAAGCACAGGGATTCGGGGACGCCAAGAGCCGGGCCCGTTACGGCGCTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS CCA 90 bp CGCCGTAACGGGCCCGGCTCTTGGCGTCCCCGAATCCCTGTGCTTTaGCGGCGGCCGACAGGAAAGTTGTGCCGAACTTGTCGCCTCCGG +
Preference number: 5 (lower is better)
Translates to: RRNGPGSWRPRIPVL*RRPTGKLCRTCRLR
Trigger: CCGGAGGCGACAAGTTCGGCACAACTTTCCTGTCGGCCGCCGCCAAAGCACAGGGATTCGGGGACGCCAAGAGCCGGGCCCGTTACGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR CAA 90 bp AGCAGACGCATGGAGGAACTGAGTGCCGGGGGCCACTGCGGAAGAGCCCCCTTAGCCTGCACGCAGCTTTaGACCCTCTGCCACCCGGCC +
Preference number: 5 (lower is better)
Translates to: SRRMEELSAGGHCGRAPLACTQL*TLCHPA
Trigger: GGCCGGGTGGCAGAGGGTCAAAAGCTGCGTGCAGGC...TAAGGGGGCTCTTCCGCAGTGGCCCCCGGCACTCAGTTCCTCCATGCGTCTGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS GCA 90 bp CGCAGGGGACCACGCAGGCTGGCACTGGTGAGGCAGCCCCGTTGTTaGCGAGCCAGGACGGGTTCTGAATCTGGGCGTAGTTCTCAGCTC +
Preference number: 5 (lower is better)
Translates to: RRGPRRLALVRQPRC*RARTGSESGRSSQL
Trigger: GAGCTGAGAACTACGCCCAGATTCAGAACCCGTCCTGGCTCGGCAACAACGGGGCTGCCTCACCAGTGCCAGCCTGCGTGGTCCCCTGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS GCA 90 bp CTCGCCGTTGAGCTCGTAGCCATTGAGGCCTGGGCTGAGGCTGGCTaGTCCAAACAGGCTGCCCATGTGCGTCTGGCCCACGTGACTGCC +
Preference number: 5 (lower is better)
Translates to: LAVELVAIEAWAEAG*SKQAAHVRLAHVTA
Trigger: GGCAGTCACGTGGGCCAGACGCACATGGGCAGCCTGTTTGGAGCAGCCAGCCTCAGCCCAGGCCTCAATGGCTACGAGCTCAACGGCGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR CAA 90 bp TGTCATCCTCTGCCCACTCTCTCCAGGTGTATCCAGCCTAGGGGACAGCCAGGACCGTCCGGGGGCGTCTaGCAGGCGCCTCGCTGCAAG +
Preference number: 5 (lower is better)
Translates to: CHPLPTLSRCIQPRGQPGPSGGV*QAPRCK
Trigger: CTTGCAGCGAGGCGCCTGCAAGACGCCCCCGGACGG...TCCTGGCTGTCCCCTAGGCTGGATACACCTGGAGAGAGTGGGCAGAGGATGACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS TCA 90 bp AGGCTGGCTGCTCCAAACAGGCTGCCCATGTGCGTCTGGCCCACGTaGCTGCCAGCCCCAGACACACTCAGGAAGTCGGTGACGCTGCTG +
Preference number: 5 (lower is better)
Translates to: RLAAPNRLPMCVWPT*LPAPDTLRKSVTLL
Trigger: CAGCAGCGTCACCGACTTCCTGAGTGTGTCTGGGGCTGGCAGTCACGTGGGCCAGACGCACATGGGCAGCCTGTTTGGAGCAGCCAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS GCA 90 bp GGCGGCCGACAGGAAAGTTGTGCCGAACTTGTCGCCTCCGGGAAATaGCCTAAAAGGCGACGAGCCCTCCCGACTCTGCGACACCGGGCT +
Preference number: 5 (lower is better)
Translates to: GGRQESCAELVASGK*PKRRRALPTLRHRA
Trigger: AGCCCGGTGTCGCAGAGTCGGGAGGGCTCGTCGCCTTTTAGGGCATTTCCCGGAGGCGACAAGTTCGGCACAACTTTCCTGTCGGCCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS CCA 90 bp ACGAGCCCTCCCGACTCTGCGACACCGGGCTGTAGTAGGCGTCCATaGCAGCGGCCGGCGACTCGCAGTAAGAGACGCAAGTCTCAGCAT +
Preference number: 5 (lower is better)
Translates to: TSPPDSATPGCSRRP*QRPATRSKRRKSQH
Trigger: ATGCTGAGACTTGCGTCTCTTACTGCGAGTCGCCGGCCGCTGCCATGGACGCCTACTACAGCCCGGTGTCGCAGAGTCGGGAGGGCTCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR CAA 90 bp TGGCCACCTGGCTTTCTCCACTGCCTGTGGCCGGGAGCAGGGGTCAGGGCCTCAGCACCATGGGAGCCCTaGTGGCATCTGTGTTCTCAG +
Preference number: 5 (lower is better)
Translates to: WPPGFLHCLWPGAGVRASAPWEP*WHLCSQ
Trigger: CTGAGAACACAGATGCCACAAGGGCTCCCATGGTGC...TGAGGCCCTGACCCCTGCTCCCGGCCACAGGCAGTGGAGAAAGCCAGGTGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR CAA 90 bp TGGGCAGCTGCCCTGACTTGCTCAGTCATCCTAGGAGCTGACACGGCAGTGGCCGGACCCACCCCACACTaGCTGCACCTACCCCATCGC +
Preference number: 5 (lower is better)
Translates to: WAAALTCSVILGADTAVAGPTPH*LHLPHR
Trigger: GCGATGGGGTAGGTGCAGCAAGTGTGGGGTGGGTCC...GGCCACTGCCGTGTCAGCTCCTAGGATGACTGAGCAAGTCAGGGCAGCTGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR CAA 90 bp ACCCCAGAGACCCTCATTCAACAACACCAAGTTTACCCTCCGCCCAACCCAGGAGCATTCATGCCTGGCTaGCGCAGGCGGCGGGCGGGG +
Preference number: 5 (lower is better)
Translates to: TPETLIQQHQVYPPPNPGAFMPG*RRRRAG
Trigger: CCCCGCCCGCCGCCTGCGCAAGCCAGGCATGAATGC...TCCTGGGTTGGGCGGAGGGTAAACTTGGTGTTGTTGAATGAGGGTCTCTGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR CAA 90 bp AGCAGACGCATGGAGGAACTGAGTGCCGGGGGCCACTGCGGAAGAGCCCCCTTACGGCCGACAGGAAAGTaGTGCCGAACTTGTCGCCTC +
Preference number: 5 (lower is better)
Translates to: SRRMEELSAGGHCGRAPLRPTGK*CRTCRL
Trigger: GAGGCGACAAGTTCGGCACAACTTTCCTGTCGGCCG...TAAGGGGGCTCTTCCGCAGTGGCCCCCGGCACTCAGTTCCTCCATGCGTCTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR CAA 90 bp TGTCATCCTCTGCCCACTCTCTCCAGGTGTATCCAGCCTAGGGGACAGCCAGGAGAGGCAGCCCCGTTGTaGCCGAGCCAGGACGGGTTC +
Preference number: 5 (lower is better)
Translates to: CHPLPTLSRCIQPRGQPGEAAPL*PSQDGF
Trigger: GAACCCGTCCTGGCTCGGCAACAACGGGGCTGCCTC...TCCTGGCTGTCCCCTAGGCTGGATACACCTGGAGAGAGTGGGCAGAGGATGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR CAA 90 bp ACACAGAGCCCCCATCTGCCGTGGAAGGCTCTGGGCAGCGATGACACTGACAGACCGAATCCCTGTGCTTaGGCGGCGGCCGACAGGAAA +
Preference number: 5 (lower is better)
Translates to: TQSPHLPWKALGSDDTDRPNPCA*AAADRK
Trigger: TTTCCTGTCGGCCGCCGCCAAAGCACAGGGATTCGG...TCTGTCAGTGTCATCGCTGCCCAGAGCCTTCCACGGCAGATGGGGGCTCTGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR CAA 90 bp CGAAGTTGTGAGTCCTTCCATGCCGGGACACTGCTGAGCAGCCCCAGGGAGGGGCGCTTCTTGCCCTTGTaGCTCTCTGAGTCGGCCTTC +
Preference number: 5 (lower is better)
Translates to: RSCESFHAGTLLSSPREGRFLPL*LSESAF
Trigger: GAAGGCCGACTCAGAGAGCAACAAGGGCAAGAAGCG...CCCCTCCCTGGGGCTGCTCAGCAGTGTCCCGGCATGGAAGGACTCACAACTTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR CAA 90 bp CTGGATGGAGAACAAAGCTGCCCAGACCTCCCCGCTGTACCAGATGCCAGGCAGCGCCGCTTCTTGCCCTaGTTGCTCTCTGAGTCGGCC +
Preference number: 5 (lower is better)
Translates to: LDGEQSCPDLPAVPDARQRRFLP*LLSESA
Trigger: GGCCGACTCAGAGAGCAACAAGGGCAAGAAGCGGCG...CTGCCTGGCATCTGGTACAGCGGGGAGGTCTGGGCAGCTTTGTTCTCCATCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR CAA 90 bp GAGGAAAGTCGAGTGGGAGGCTGGGGGCCTGGAAAACATGGGCGTGGCCCATGGCTGCAGTGCAGAAGGTaGGGCCTAGCCACCTGTCTT +
Preference number: 5 (lower is better)
Translates to: EESRVGGWGPGKHGRGPWLQCRR*GLATCL
Trigger: AAGACAGGTGGCTAGGCCCAACCTTCTGCACTGCAG...CCATGGGCCACGCCCATGTTTTCCAGGCCCCCAGCCTCCCACTCGACTTTCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR CAA 90 bp GAGGAAAGTCGAGTGGGAGGCTGGGGGCCTGGAAAACATGGGCGTGGCCCATGGAAAGTTGTGCCGAACTaGTCGCCTCCGGGAAATGCC +
Preference number: 5 (lower is better)
Translates to: EESRVGGWGPGKHGRGPWKVVPN*SPPGNA
Trigger: GGCATTTCCCGGAGGCGACAAGTTCGGCACAACTTT...CCATGGGCCACGCCCATGTTTTCCAGGCCCCCAGCCTCCCACTCGACTTTCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR CAA 90 bp ACCCCAGAGACCCTCATTCAACAACACCAAGTTTACCCTCCGCCCAACCCAGGACTGCCTTCCTGGAGTTaGAGGCTGCCGTCCGGGGGC +
Preference number: 5 (lower is better)
Translates to: TPETLIQQHQVYPPPNPGLPSWS*RLPSGG
Trigger: GCCCCCGGACGGCAGCCTCAAACTCCAGGAAGGCAG...TCCTGGGTTGGGCGGAGGGTAAACTTGGTGTTGTTGAATGAGGGTCTCTGGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR CAA 90 bp GGCTGTCAGTGTGGGGAGGCTGCCCATCCATCTGCCGGCTACCCACGACTTTATGGCAGCTGCCCTGACTaGCTCAGTCATCCTAGGAGC +
Preference number: 5 (lower is better)
Translates to: GCQCGEAAHPSAGYPRLYGSCPD*LSHPRS
Trigger: GCTCCTAGGATGACTGAGCAAGTCAGGGCAGCTGCC...ATAAAGTCGTGGGTAGCCGGCAGATGGATGGGCAGCCTCCCCACACTGACAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR CAA 90 bp ACACAGAGCCCCCATCTGCCGTGGAAGGCTCTGGGCAGCGATGACACTGACAGAAATGCCCATGAGGCATaGGAGAGGGGAGCTCCATGC +
Preference number: 5 (lower is better)
Translates to: TQSPHLPWKALGSDDTDRNAHEA*ERGAPC
Trigger: GCATGGAGCTCCCCTCTCCAATGCCTCATGGGCATT...TCTGTCAGTGTCATCGCTGCCCAGAGCCTTCCACGGCAGATGGGGGCTCTGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS GCA 90 bp GTGAGGAGGGGCAGCTCATATGCAGTGGAGAAGTGGGTTCGAACCTaGTGCATCTGCCCAAAACGCTCCCGCTTCCTCCACTTGGCCCTT +
Preference number: 5 (lower is better)
Translates to: VRRGSSYAVEKWVRT*CICPKRSRFLHLAL
Trigger: AAGGGCCAAGTGGAGGAAGCGGGAGCGTTTTGGGCAGATGCAGCAGGTTCGAACCCACTTCTCCACTGCATATGAGCTGCCCCTCCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS CCA 90 bp TTCTCAGCTCGGGTGAGGAGGGGCAGCTCATATGCAGTGGAGAAGTaGGTTCGAACCTGCTGCATCTGCCCAAAACGCTCCCGCTTCCTC +
Preference number: 5 (lower is better)
Translates to: FSARVRRGSSYAVEK*VRTCCICPKRSRFL
Trigger: GAGGAAGCGGGAGCGTTTTGGGCAGATGCAGCAGGTTCGAACCCACTTCTCCACTGCATATGAGCTGCCCCTCCTCACCCGAGCTGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR CAA 90 bp CAGCTAGGCCTGTTTGCCTTTGCACTGGACAGTAAGGGCCATGAAACAGACCAGCACGGGGCCTCAGACTaGGGGCGGCTGAAAGTGCTG +
Preference number: 5 (lower is better)
Translates to: QLGLFAFALDSKGHETDQHGASD*GRLKVL
Trigger: CAGCACTTTCAGCCGCCCCAAGTCTGAGGCCCCGTG...CTGGTCTGTTTCATGGCCCTTACTGTCCAGTGCAAAGGCAAACAGGCCTAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR CAA 90 bp GCAAAGGGTGTTCTGGGAGTGCCCGGCTACCTCTGCACTCCATTTTGCCCCATGTTTGTCCTGATTCCCTaGCTCTCCCTCCTGGCCCAC +
Preference number: 5 (lower is better)
Translates to: AKGVLGVPGYLCTPFCPMFVLIP*LSLLAH
Trigger: GTGGGCCAGGAGGGAGAGCAAGGGAATCAGGACAAA...CATGGGGCAAAATGGAGTGCAGAGGTAGCCGGGCACTCCCAGAACACCCTTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR CAA 90 bp CTGGATGGAGAACAAAGCTGCCCAGACCTCCCCGCTGTACCAGATGCCAGGCAGCAACAACCAAACAGTTaGGGCTGGGCCAGCAAAGGG +
Preference number: 5 (lower is better)
Translates to: LDGEQSCPDLPAVPDARQQQPNS*GWASKG
Trigger: CCCTTTGCTGGCCCAGCCCAAACTGTTTGGTTGTTG...CTGCCTGGCATCTGGTACAGCGGGGAGGTCTGGGCAGCTTTGTTCTCCATCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR CAA 90 bp TTCTTCCTTTCCCTGGCTAGATTTTGGGGGAGTCTGGGTCATTTCAGCGAACCTGCCGCACTGTGCTCCTaGGCCTTCATGCGGAGGGCC +
Preference number: 5 (lower is better)
Translates to: FFLSLARFWGSLGHFSEPAALCS*AFMRRA
Trigger: GGCCCTCCGCATGAAGGCCAAGGAGCACAGTGCGGC...AGGTTCGCTGAAATGACCCAGACTCCCCCAAAATCTAGCCAGGGAAAGGAAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS GCA 90 bp AATCTGGGCGTAGTTCTCAGCTCGGGTGAGGAGGGGCAGCTCATATaGAGTGGAGAAGTGGGTTCGAACCTGCTGCATCTGCCCAAAACG +
Preference number: 5 (lower is better)
Translates to: NLGVVLSSGEEGQLI*SGEVGSNLLHLPKT
Trigger: CGTTTTGGGCAGATGCAGCAGGTTCGAACCCACTTCTCCACTGCATATGAGCTGCCCCTCCTCACCCGAGCTGAGAACTACGCCCAGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR CAA 90 bp GAGGAAAGTCGAGTGGGAGGCTGGGGGCCTGGAAAACATGGGCGTGGCCCATGGCATGGAAATCTAGCATaGACTCATGGTCAACTAGGC +
Preference number: 5 (lower is better)
Translates to: EESRVGGWGPGKHGRGPWHGNLA*THGQLG
Trigger: GCCTAGTTGACCATGAGTCAATGCTAGATTTCCATG...CCATGGGCCACGCCCATGTTTTCCAGGCCCCCAGCCTCCCACTCGACTTTCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR CAA 90 bp GGCGCCTTGGCCCCAGCAGGTCGGATTCCGTGTGCTTTCAGGGAGAGAAAGATGAGTGCTATTTCAGCCTaGGAGACAAGCCTCTCTGTG +
Preference number: 5 (lower is better)
Translates to: GALAPAGRIPCAFRERKMSAISA*ETSLSV
Trigger: CACAGAGAGGCTTGTCTCCAAGGCTGAAATAGCACT...CATCTTTCTCTCCCTGAAAGCACACGGAATCCGACCTGCTGGGGCCAAGGCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR CAA 90 bp TTCTTCCTTTCCCTGGCTAGATTTTGGGGGAGTCTGGGTCATTTCAGCGAACCTCGGTTCCGCCGCTTCTaGCCCTTGTTGCTCTCTGAG +
Preference number: 5 (lower is better)
Translates to: FFLSLARFWGSLGHFSEPRFRRF*PLLLSE
Trigger: CTCAGAGAGCAACAAGGGCAAGAAGCGGCGGAACCG...AGGTTCGCTGAAATGACCCAGACTCCCCCAAAATCTAGCCAGGGAAAGGAAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR CAA 90 bp ACAGGCCTGCCTCTGGACGGTTACTGTGTACTCCCAGCTGAGGTGAGGGCTGGGCAGGAATGTTTCACATaGGCATGTTTAATCCTAGAC +
Preference number: 5 (lower is better)
Translates to: TGLPLDGYCVLPAEVRAGQECFT*ACLILD
Trigger: GTCTAGGATTAAACATGCCAATGTGAAACATTCCTG...CCCAGCCCTCACCTCAGCTGGGAGTACACAGTAACCGTCCAGAGGCAGGCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR CAA 90 bp ACTCCAAATCCTCAAATATTTGAAACACTTAAAGCCAAGCCTCCAAGAACATTTGGTGAGGCAGCCCCGTaGTTGCCGAGCCAGGACGGG +
Preference number: 5 (lower is better)
Translates to: TPNPQIFETLKAKPPRTFGEAAP*LPSQDG
Trigger: CCCGTCCTGGCTCGGCAACAACGGGGCTGCCTCACC...AAATGTTCTTGGAGGCTTGGCTTTAAGTGTTTCAAATATTTGAGGATTTGGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS-3UTR CAA 90 bp ACTCCAAATCCTCAAATATTTGAAACACTTAAAGCCAAGCCTCCAAGAACATTTCCCTGGGGACTGGCATaGCTAGATGGCAGCAGGGGT +
Preference number: 5 (lower is better)
Translates to: TPNPQIFETLKAKPPRTFPWGLA*LDGSRG
Trigger: ACCCCTGCTGCCATCTAGCAATGCCAGTCCCCAGGG...AAATGTTCTTGGAGGCTTGGCTTTAAGTGTTTCAAATATTTGAGGATTTGGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS CCA 72 bp GGTCCTGCTGCCCAGCGCCGTAACGGGCCCGGCTCTTaGCGTCCCCGAATCCCTGTGCTTTGGCGGCGGCCG +
Preference number: 6 (lower is better)
Translates to: GPAAQRRNGPGS*RPRIPVLWRRP
Trigger: CGGCCGCCGCCAAAGCACAGGGATTCGGGGACGCCAAGAGCCGGGCCCGTTACGGCGCTGGGCAGCAGGACC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS CAA 90 bp GTCCGGGGGCGTCTTGCAGGCGCCTCGCTGCAAGTAAAGATGCGGTaGCGCGGGCGGCTGGGGCTGCGGCTGCTGCTGCTGCGGCTGCGG +
Preference number: 6 (lower is better)
Translates to: VRGRLAGASLQVKMR*RGRLGLRLLLLRLR
Trigger: CCGCAGCCGCAGCAGCAGCAGCCGCAGCCCCAGCCGCCCGCGCAACCGCATCTTTACTTGCAGCGAGGCGCCTGCAAGACGCCCCCGGAC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS TCA 72 bp AGGCCGCGCTGTGGCCGCTGCTGCCTTCCTGGAGTTTaGGGCTGCCGTCCGGGGGCGTCTTGCAGGCGCCTC +
Preference number: 6 (lower is better)
Translates to: RPRCGRCCLPGV*GCRPGASCRRL
Trigger: GAGGCGCCTGCAAGACGCCCCCGGACGGCAGCCTCAAACTCCAGGAAGGCAGCAGCGGCCACAGCGCGGCCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS TCA 72 bp CACCGGGTCGCAGGGGACCACGCAGGCTGGCACTGGTaGGGCAGCCCCGTTGTTGCCGAGCCAGGACGGGTT +
Preference number: 6 (lower is better)
Translates to: HRVAGDHAGWHW*GSPVVAEPGRV
Trigger: AACCCGTCCTGGCTCGGCAACAACGGGGCTGCCTCACCAGTGCCAGCCTGCGTGGTCCCCTGCGACCCGGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS CAA 72 bp AAGGCCGCGCTGTGGCCGCTGCTGCCTTCCTGGAGTTaGAGGCTGCCGTCCGGGGGCGTCTTGCAGGCGCCT +
Preference number: 6 (lower is better)
Translates to: KAALWPLLPSWS*RLPSGGVLQAP
Trigger: AGGCGCCTGCAAGACGCCCCCGGACGGCAGCCTCAAACTCCAGGAAGGCAGCAGCGGCCACAGCGCGGCCTT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS CAA 90 bp GGAACCTGCAAGGCCGCGCTGTGGCCGCTGCTGCCTTCCTGGAGTTaGAGGCTGCCGTCCGGGGGCGTCTTGCAGGCGCCTCGCTGCAAG +
Preference number: 6 (lower is better)
Translates to: GTCKAALWPLLPSWS*RLPSGGVLQAPRCK
Trigger: CTTGCAGCGAGGCGCCTGCAAGACGCCCCCGGACGGCAGCCTCAAACTCCAGGAAGGCAGCAGCGGCCACAGCGCGGCCTTGCAGGTTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS CCA 72 bp ACCTGCAAGGCCGCGCTGTGGCCGCTGCTGCCTTCCTaGAGTTTGAGGCTGCCGTCCGGGGGCGTCTTGCAG +
Preference number: 6 (lower is better)
Translates to: TCKAALWPLLPS*SLRLPSGGVLQ
Trigger: CTGCAAGACGCCCCCGGACGGCAGCCTCAAACTCCAGGAAGGCAGCAGCGGCCACAGCGCGGCCTTGCAGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS GCA 72 bp GCGACTCGCAGTAAGAGACGCAAGTCTCAGCATTCATaGCTGGCTTGCGCAGGCGGCGGGCGGGGACGCGAG +
Preference number: 6 (lower is better)
Translates to: ATRSKRRKSQHS*LACAGGGRGRE
Trigger: CTCGCGTCCCCGCCCGCCGCCTGCGCAAGCCAGGCATGAATGCTGAGACTTGCGTCTCTTACTGCGAGTCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS CCA 72 bp CTCGCAGTAAGAGACGCAAGTCTCAGCATTCATGCCTaGCTTGCGCAGGCGGCGGGCGGGGACGCGAGCGAG +
Preference number: 6 (lower is better)
Translates to: LAVRDASLSIHA*LAQAAGGDASE
Trigger: CTCGCTCGCGTCCCCGCCCGCCGCCTGCGCAAGCCAGGCATGAATGCTGAGACTTGCGTCTCTTACTGCGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS CCA 72 bp CCCGACTCTGCGACACCGGGCTGTAGTAGGCGTCCATaGCAGCGGCCGGCGACTCGCAGTAAGAGACGCAAG +
Preference number: 6 (lower is better)
Translates to: PDSATPGCSRRP*QRPATRSKRRK
Trigger: CTTGCGTCTCTTACTGCGAGTCGCCGGCCGCTGCCATGGACGCCTACTACAGCCCGGTGTCGCAGAGTCGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS CAA 72 bp CGGGCCCGGCTCTTGGCGTCCCCGAATCCCTGTGCTTaGGCGGCGGCCGACAGGAAAGTTGTGCCGAACTTG +
Preference number: 6 (lower is better)
Translates to: RARLLASPNPCA*AAADRKVVPNL
Trigger: CAAGTTCGGCACAACTTTCCTGTCGGCCGCCGCCAAAGCACAGGGATTCGGGGACGCCAAGAGCCGGGCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS GCA 72 bp GTAACGGGCCCGGCTCTTGGCGTCCCCGAATCCCTGTaGTTTGGCGGCGGCCGACAGGAAAGTTGTGCCGAA +
Preference number: 6 (lower is better)
Translates to: VTGPALGVPESL*FGGGRQESCAE
Trigger: TTCGGCACAACTTTCCTGTCGGCCGCCGCCAAAGCACAGGGATTCGGGGACGCCAAGAGCCGGGCCCGTTAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS CCA 72 bp GGGCCCGGCTCTTGGCGTCCCCGAATCCCTGTGCTTTaGCGGCGGCCGACAGGAAAGTTGTGCCGAACTTGT +
Preference number: 6 (lower is better)
Translates to: GPGSWRPRIPVL*RRPTGKLCRTC
Trigger: ACAAGTTCGGCACAACTTTCCTGTCGGCCGCCGCCAAAGCACAGGGATTCGGGGACGCCAAGAGCCGGGCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS TCA 72 bp GCTCCAAACAGGCTGCCCATGTGCGTCTGGCCCACGTaGCTGCCAGCCCCAGACACACTCAGGAAGTCGGTG +
Preference number: 6 (lower is better)
Translates to: APNRLPMCVWPT*LPAPDTLRKSV
Trigger: CACCGACTTCCTGAGTGTGTCTGGGGCTGGCAGTCACGTGGGCCAGACGCACATGGGCAGCCTGTTTGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS GCA 72 bp CAGGAAAGTTGTGCCGAACTTGTCGCCTCCGGGAAATaGCCTAAAAGGCGACGAGCCCTCCCGACTCTGCGA +
Preference number: 6 (lower is better)
Translates to: QESCAELVASGK*PKRRRALPTLR
Trigger: TCGCAGAGTCGGGAGGGCTCGTCGCCTTTTAGGGCATTTCCCGGAGGCGACAAGTTCGGCACAACTTTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS CCA 72 bp CGGGTGAGGAGGGGCAGCTCATATGCAGTGGAGAAGTaGGTTCGAACCTGCTGCATCTGCCCAAAACGCTCC +
Preference number: 6 (lower is better)
Translates to: RVRRGSSYAVEK*VRTCCICPKRS
Trigger: GGAGCGTTTTGGGCAGATGCAGCAGGTTCGAACCCACTTCTCCACTGCATATGAGCTGCCCCTCCTCACCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS GCA 72 bp GGCAGCTCATATGCAGTGGAGAAGTGGGTTCGAACCTaGTGCATCTGCCCAAAACGCTCCCGCTTCCTCCAC +
Preference number: 6 (lower is better)
Translates to: GSSYAVEKWVRT*CICPKRSRFLH
Trigger: GTGGAGGAAGCGGGAGCGTTTTGGGCAGATGCAGCAGGTTCGAACCCACTTCTCCACTGCATATGAGCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS GCA 72 bp TATGCAGTGGAGAAGTGGGTTCGAACCTGCTGCATCTaGCCAAAACGCTCCCGCTTCCTCCACTTGGCCCTT +
Preference number: 6 (lower is better)
Translates to: YAVEKWVRTCCI*PKRSRFLHLAL
Trigger: AAGGGCCAAGTGGAGGAAGCGGGAGCGTTTTGGGCAGATGCAGCAGGTTCGAACCCACTTCTCCACTGCATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS GCA 72 bp GTAGTTCTCAGCTCGGGTGAGGAGGGGCAGCTCATATaGAGTGGAGAAGTGGGTTCGAACCTGCTGCATCTG +
Preference number: 6 (lower is better)
Translates to: VVLSSGEEGQLI*SGEVGSNLLHL
Trigger: CAGATGCAGCAGGTTCGAACCCACTTCTCCACTGCATATGAGCTGCCCCTCCTCACCCGAGCTGAGAACTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652299.1
CDS GCA 72 bp AGCTCATATGCAGTGGAGAAGTGGGTTCGAACCTGCTaGATCTGCCCAAAACGCTCCCGCTTCCTCCACTTG +
Preference number: 6 (lower is better)
Translates to: SSYAVEKWVRTC*ICPKRSRFLHL
Trigger: CAAGTGGAGGAAGCGGGAGCGTTTTGGGCAGATGCAGCAGGTTCGAACCCACTTCTCCACTGCATATGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652299.1