Pregenerated sensors for ALPP (Homo sapiens)
Ensembl gene IDs: ENSG00000163283Ensembl transcript IDs: ENST00000392027.3, ENST00000474529.1
Found 53 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGTCCAGATGTCTGGGGAGGGACCTTTGGCTCTCGACCAGTGTCCTaGACCCAGGGCTTCCCAGGAGCTCCTCGGATCTCAGTTGGGTGC | + |
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Preference number: 1 (lower is better) Translates to: CPDVWGGTFGSRPVS*TQGFPGAPRISVGC Trigger: GCACCCAACTGAGATCCGAGGAGCTCCTGGGAAGCCCTGGGTGCAGGACACTGGTCGAGAGCCAAAGGTCCCTCCCCAGACATCTGGACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392027.3 |
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| 3UTR CCA 90 bp | CCGCCCGGGTTCAAGCGATTATCCTGCTTCAGCCTCCTGGGTAGCTaGGACTACAGGCGCATAGATAAGGGGTTTCACCGTGTTAGCCAG | + |
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Preference number: 1 (lower is better) Translates to: PPGFKRLSCFSLLGS*DYRRIDKGFHRVSQ Trigger: CTGGCTAACACGGTGAAACCCCTTATCTATGCGCCTGTAGTCCCAGCTACCCAGGAGGCTGAAGCAGGATAATCGCTTGAACCCGGGCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392027.3 |
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| 3UTR-3UTR GCA 90 bp | CCCACAGGTGATTCAAGGACTGAAGCAAAGATCAGCGGGGCGCGGGGTCTGGGTCCCAGGAAGGGAGCCTaGCTGGTACCCACTGGGCTG | + |
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Preference number: 2 (lower is better) Translates to: PTGDSRTEAKISGARGLGPRKGA*LVPTGL Trigger: CAGCCCAGTGGGTACCAGGCAGGCTCCCTTCCTGGG...ACCCAGACCCCGCGCCCCGCTGATCTTTGCTTCAGTCCTTGAATCACCTGTGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000392027.3 |
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| 3UTR-3UTR GCA 90 bp | CCCACAGGTGATTCAAGGACTGAAGCAAAGATCAGCGGGGCGCGGGGTCTGGGTCCTCCTTTCCTGGGGTaGAGGCAGCCACAGGGCACA | + |
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Preference number: 2 (lower is better) Translates to: PTGDSRTEAKISGARGLGPPFLG*RQPQGT Trigger: TGTGCCCTGTGGCTGCCTGCACCCCAGGAAAGGAGG...ACCCAGACCCCGCGCCCCGCTGATCTTTGCTTCAGTCCTTGAATCACCTGTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000392027.3 |
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| 3UTR-3UTR CCA 90 bp | CCCACAGGTGATTCAAGGACTGAAGCAAAGATCAGCGGGGCGCGGGGTCTGGGTCAGGACGACAGGAGGTaGGGAGCAGGAGAACTCCGG | + |
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Preference number: 2 (lower is better) Translates to: PTGDSRTEAKISGARGLGQDDRR*GAGELR Trigger: CCGGAGTTCTCCTGCTCCCCACCTCCTGTCGTCCTG...ACCCAGACCCCGCGCCCCGCTGATCTTTGCTTCAGTCCTTGAATCACCTGTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000392027.3 |
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| 3UTR-3UTR CCA 90 bp | TCAAGTCCCACAGGTGATTCAAGGACTGAAGCAAAGATCAGCGGGGCGCGGGGTAGCCCCCTCCTTTCCTaGGGTGCAGGCAGCCACAGG | + |
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Preference number: 2 (lower is better) Translates to: SSPTGDSRTEAKISGARGSPLLS*GAGSHR Trigger: CCTGTGGCTGCCTGCACCCCAGGAAAGGAGGGGGCT...ACCCCGCGCCCCGCTGATCTTTGCTTCAGTCCTTGAATCACCTGTGGGACTTGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000392027.3 |
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| 3UTR-3UTR CCA 90 bp | TCAAGTCCCACAGGTGATTCAAGGACTGAAGCAAAGATCAGCGGGGCGCGGGGTGATGACGACTCGGGCTaGAGGCCAGGCAGGACGACA | + |
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Preference number: 2 (lower is better) Translates to: SSPTGDSRTEAKISGARGDDDSG*RPGRTT Trigger: TGTCGTCCTGCCTGGCCTCCAGCCCGAGTCGTCATC...ACCCCGCGCCCCGCTGATCTTTGCTTCAGTCCTTGAATCACCTGTGGGACTTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000392027.3 |
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| 3UTR-3UTR CCA 90 bp | AAGCGATTATCCTGCTTCAGCCTCCTGGGTAGCTGGGACTACAGGCGCATAGATTGCAGTCCCTGGGGTTaGGGTAGGGAGTCCGAGAGC | + |
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Preference number: 2 (lower is better) Translates to: KRLSCFSLLGSWDYRRIDCSPWG*GRESES Trigger: GCTCTCGGACTCCCTACCCCAACCCCAGGGACTGCA...ATCTATGCGCCTGTAGTCCCAGCTACCCAGGAGGCTGAAGCAGGATAATCGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392027.3 |
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| 3UTR-3UTR CCA 90 bp | AAGCGATTATCCTGCTTCAGCCTCCTGGGTAGCTGGGACTACAGGCGCATAGATCTGCCTGGTACCCACTaGGCTGTAGGTGGTGGCTGG | + |
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Preference number: 2 (lower is better) Translates to: KRLSCFSLLGSWDYRRIDLPGTH*AVGGGW Trigger: CCAGCCACCACCTACAGCCCAGTGGGTACCAGGCAG...ATCTATGCGCCTGTAGTCCCAGCTACCCAGGAGGCTGAAGCAGGATAATCGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392027.3 |
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| 3UTR-3UTR CCA 90 bp | AAGCGATTATCCTGCTTCAGCCTCCTGGGTAGCTGGGACTACAGGCGCATAGATACAACCTGCAGTCCCTaGGGTTGGGGTAGGGAGTCC | + |
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Preference number: 2 (lower is better) Translates to: KRLSCFSLLGSWDYRRIDTTCSP*GWGRES Trigger: GGACTCCCTACCCCAACCCCAGGGACTGCAGGTTGT...ATCTATGCGCCTGTAGTCCCAGCTACCCAGGAGGCTGAAGCAGGATAATCGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392027.3 |
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| 3UTR-3UTR CCA 90 bp | AAGCGATTATCCTGCTTCAGCCTCCTGGGTAGCTGGGACTACAGGCGCATAGATCCTTGGCCAGCAGGGTaGCAGGAAACCACCCTTCTC | + |
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Preference number: 2 (lower is better) Translates to: KRLSCFSLLGSWDYRRIDPWPAG*QETTLL Trigger: GAGAAGGGTGGTTTCCTGCCACCCTGCTGGCCAAGG...ATCTATGCGCCTGTAGTCCCAGCTACCCAGGAGGCTGAAGCAGGATAATCGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392027.3 |
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| 3UTR GCA 72 bp | GTCTGGGGAGGGACCTTTGGCTCTCGACCAGTGTCCTaGACCCAGGGCTTCCCAGGAGCTCCTCGGATCTCA | + |
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Preference number: 3 (lower is better) Translates to: VWGGTFGSRPVS*TQGFPGAPRIS Trigger: TGAGATCCGAGGAGCTCCTGGGAAGCCCTGGGTGCAGGACACTGGTCGAGAGCCAAAGGTCCCTCCCCAGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392027.3 |
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| 3UTR TCA 72 bp | AAATTGGCATGTGGGGGTATGGAACGTCTGAGAAGTTaGGATTTGGGGCAAGCCTTTGCCATGAGGCAGAGG | + |
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Preference number: 3 (lower is better) Translates to: KLACGGMERLRS*DLGQAFAMRQR Trigger: CCTCTGCCTCATGGCAAAGGCTTGCCCCAAATCTCAACTTCTCAGACGTTCCATACCCCCACATGCCAATTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000392027.3 |
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| CDS-3UTR GCA 90 bp | GACCTCTGTATAGGGACTCCGGGGATGACGACTCGGGCTGGAGGCCAGGCAGGACCCAGGAAGGGAGCCTaGCTGGTACCCACTGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: DLCIGTPGMTTRAGGQAGPRKGA*LVPTGL Trigger: CAGCCCAGTGGGTACCAGGCAGGCTCCCTTCCTGGG...TCCTGCCTGGCCTCCAGCCCGAGTCGTCATCCCCGGAGTCCCTATACAGAGGTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392027.3 |
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| CDS-3UTR CCA 90 bp | GACCTCTGTATAGGGACTCCGGGGATGACGACTCGGGCTGGAGGCCAGGCAGGAAGCCCCCTCCTTTCCTaGGGTGCAGGCAGCCACAGG | + |
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Preference number: 4 (lower is better) Translates to: DLCIGTPGMTTRAGGQAGSPLLS*GAGSHR Trigger: CCTGTGGCTGCCTGCACCCCAGGAAAGGAGGGGGCT...TCCTGCCTGGCCTCCAGCCCGAGTCGTCATCCCCGGAGTCCCTATACAGAGGTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000392027.3 |
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| CDS-3UTR CCA 90 bp | GACCTCTGTATAGGGACTCCGGGGATGACGACTCGGGCTGGAGGCCAGGCAGGATGCAGTCCCTGGGGTTaGGGTAGGGAGTCCGAGAGC | + |
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Preference number: 4 (lower is better) Translates to: DLCIGTPGMTTRAGGQAGCSPWG*GRESES Trigger: GCTCTCGGACTCCCTACCCCAACCCCAGGGACTGCA...TCCTGCCTGGCCTCCAGCCCGAGTCGTCATCCCCGGAGTCCCTATACAGAGGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000392027.3 |
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| CDS-3UTR GCA 90 bp | GACCTCTGTATAGGGACTCCGGGGATGACGACTCGGGCTGGAGGCCAGGCAGGATCTCGACCAGTGTCCTaGACCCAGGGCTTCCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: DLCIGTPGMTTRAGGQAGSRPVS*TQGFPG Trigger: TCCTGGGAAGCCCTGGGTGCAGGACACTGGTCGAGA...TCCTGCCTGGCCTCCAGCCCGAGTCGTCATCCCCGGAGTCCCTATACAGAGGTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392027.3 |
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| CDS-3UTR CCA 90 bp | GACCTCTGTATAGGGACTCCGGGGATGACGACTCGGGCTGGAGGCCAGGCAGGAGCCAAGGGGCAGGTTTaGTGTCATGGGCTCAGTCCC | + |
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Preference number: 4 (lower is better) Translates to: DLCIGTPGMTTRAGGQAGAKGQV*CHGLSP Trigger: GGGACTGAGCCCATGACACCAAACCTGCCCCTTGGC...TCCTGCCTGGCCTCCAGCCCGAGTCGTCATCCCCGGAGTCCCTATACAGAGGTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000392027.3 |
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| CDS-3UTR GCA 90 bp | CCCACAGGTGATTCAAGGACTGAAGCAAAGATCAGCGGGGCGCGGGGTCTGGGTCCACAGGGCACAACCTaGAGTCCCTGGGGTTGGGGT | + |
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Preference number: 4 (lower is better) Translates to: PTGDSRTEAKISGARGLGPQGTT*SPWGWG Trigger: ACCCCAACCCCAGGGACTGCAGGTTGTGCCCTGTGG...ACCCAGACCCCGCGCCCCGCTGATCTTTGCTTCAGTCCTTGAATCACCTGTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000392027.3 |
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| CDS-3UTR CCA 90 bp | CCCACAGGTGATTCAAGGACTGAAGCAAAGATCAGCGGGGCGCGGGGTCTGGGTGCAGGTTTGGTGTCATaGGCTCAGTCCCCAGAGCGC | + |
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Preference number: 4 (lower is better) Translates to: PTGDSRTEAKISGARGLGAGLVS*AQSPER Trigger: GCGCTCTGGGGACTGAGCCCATGACACCAAACCTGC...ACCCAGACCCCGCGCCCCGCTGATCTTTGCTTCAGTCCTTGAATCACCTGTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000392027.3 |
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| CDS-3UTR CCA 90 bp | TCAAGTCCCACAGGTGATTCAAGGACTGAAGCAAAGATCAGCGGGGCGCGGGGTCCCCAGGAGCCTCCTTaGCCAGCAGGGTGGCAGGAA | + |
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Preference number: 4 (lower is better) Translates to: SSPTGDSRTEAKISGARGPQEPP*PAGWQE Trigger: TTCCTGCCACCCTGCTGGCCAAGGAGGCTCCTGGGG...ACCCCGCGCCCCGCTGATCTTTGCTTCAGTCCTTGAATCACCTGTGGGACTTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000392027.3 |
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| CDS-3UTR CCA 90 bp | GACCTCTGTATAGGGACTCCGGGGATGACGACTCGGGCTGGAGGCCAGGCAGGAAGCCTCCTGGGTAGCTaGGACTACAGGCGCATAGAT | + |
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Preference number: 4 (lower is better) Translates to: DLCIGTPGMTTRAGGQAGSLLGS*DYRRID Trigger: ATCTATGCGCCTGTAGTCCCAGCTACCCAGGAGGCT...TCCTGCCTGGCCTCCAGCCCGAGTCGTCATCCCCGGAGTCCCTATACAGAGGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392027.3 |
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| CDS-3UTR TCA 90 bp | AAGCGATTATCCTGCTTCAGCCTCCTGGGTAGCTGGGACTACAGGCGCATAGATGGCAAGCCTTTGCCATaGGGCAGAGGGCCCCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: KRLSCFSLLGSWDYRRIDGKPLP*GRGPPG Trigger: CCCAGGGGGCCCTCTGCCTCATGGCAAAGGCTTGCC...ATCTATGCGCCTGTAGTCCCAGCTACCCAGGAGGCTGAAGCAGGATAATCGCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000392027.3 |
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| CDS-3UTR CCA 90 bp | TCAAGTCCCACAGGTGATTCAAGGACTGAAGCAAAGATCAGCGGGGCGCGGGGTCAGGACGACAGGAGGTaGGGAGCAGGAGAACTCCGG | + |
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Preference number: 4 (lower is better) Translates to: SSPTGDSRTEAKISGARGQDDRR*GAGELR Trigger: CCGGAGTTCTCCTGCTCCCCACCTCCTGTCGTCCTG...ACCCCGCGCCCCGCTGATCTTTGCTTCAGTCCTTGAATCACCTGTGGGACTTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000392027.3 |
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| 3UTR CAA 72 bp | GCACCCAGGGCTTCCCAGGAGCTCCTCGGATCTCAGTaGGGTGCTGAAATTGGCATGTGGGGGTATGGAACG | + |
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Preference number: 4 (lower is better) Translates to: APRASQELLGSQ*GAEIGMWGYGT Trigger: CGTTCCATACCCCCACATGCCAATTTCAGCACCCAACTGAGATCCGAGGAGCTCCTGGGAAGCCCTGGGTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000392027.3 |
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| CDS-3UTR CCA 90 bp | GAGCTCCTCGGATCTCAGTTGGGTGCTGAAATTGGCATGTGGGGGTATGGAACGACATACCGGGCACCCTaGCGCTTCGCCAGCCATTCC | + |
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Preference number: 4 (lower is better) Translates to: ELLGSQLGAEIGMWGYGTTYRAP*RFASHS Trigger: GGAATGGCTGGCGAAGCGCCAGGGTGCCCGGTATGT...CGTTCCATACCCCCACATGCCAATTTCAGCACCCAACTGAGATCCGAGGAGCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000392027.3 |
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| CDS-3UTR CCA 90 bp | GTGATTCAAGGACTGAAGCAAAGATCAGCGGGGCGCGGGGTCTGGGTGCTTCTTCCTTGGCCAGCAGGGTaGCAGGAAACCACCCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: VIQGLKQRSAGRGVWVLLPWPAG*QETTLL Trigger: GAGAAGGGTGGTTTCCTGCCACCCTGCTGGCCAAGG...AAGAAGCACCCAGACCCCGCGCCCCGCTGATCTTTGCTTCAGTCCTTGAATCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000392027.3 |
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| CDS-3UTR CCA 90 bp | GTGATTCAAGGACTGAAGCAAAGATCAGCGGGGCGCGGGGTCTGGGTGCTTCTTCCTGCTTCAGCCTCCTaGGTAGCTGGGACTACAGGC | + |
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Preference number: 4 (lower is better) Translates to: VIQGLKQRSAGRGVWVLLPASAS*VAGTTG Trigger: GCCTGTAGTCCCAGCTACCCAGGAGGCTGAAGCAGG...AAGAAGCACCCAGACCCCGCGCCCCGCTGATCTTTGCTTCAGTCCTTGAATCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000392027.3 |
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| CDS-3UTR TCA 90 bp | TCAAGTCCCACAGGTGATTCAAGGACTGAAGCAAAGATCAGCGGGGCGCGGGGTCTTCTCCAGGCGTCCTaGAGATCCCGAGTCCTCAAG | + |
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Preference number: 4 (lower is better) Translates to: SSPTGDSRTEAKISGARGLLQAS*RSRVLK Trigger: CTTGAGGACTCGGGATCTTCAGGACGCCTGGAGAAG...ACCCCGCGCCCCGCTGATCTTTGCTTCAGTCCTTGAATCACCTGTGGGACTTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000392027.3 |
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| CDS-3UTR GCA 90 bp | AAGCGATTATCCTGCTTCAGCCTCCTGGGTAGCTGGGACTACAGGCGCATAGATCCTCCTTTCCTGGGGTaGAGGCAGCCACAGGGCACA | + |
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Preference number: 4 (lower is better) Translates to: KRLSCFSLLGSWDYRRIDPPFLG*RQPQGT Trigger: TGTGCCCTGTGGCTGCCTGCACCCCAGGAAAGGAGG...ATCTATGCGCCTGTAGTCCCAGCTACCCAGGAGGCTGAAGCAGGATAATCGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392027.3 |
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| CDS-3UTR GCA 90 bp | GAGCTCCTCGGATCTCAGTTGGGTGCTGAAATTGGCATGTGGGGGTATGGAACGTTTGGGGCAAGCCTTTaGCATGAGGCAGAGGGCCCC | + |
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Preference number: 4 (lower is better) Translates to: ELLGSQLGAEIGMWGYGTFGASL*HEAEGP Trigger: GGGGCCCTCTGCCTCATGGCAAAGGCTTGCCCCAAA...CGTTCCATACCCCCACATGCCAATTTCAGCACCCAACTGAGATCCGAGGAGCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000392027.3 |
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| CDS-3UTR GCA 90 bp | AAGCGATTATCCTGCTTCAGCCTCCTGGGTAGCTGGGACTACAGGCGCATAGATATGACCTCGGCTCACTaGAATCTCCGCCGCCCGGGT | + |
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Preference number: 4 (lower is better) Translates to: KRLSCFSLLGSWDYRRIDMTSAH*NLRRPG Trigger: ACCCGGGCGGCGGAGATTGCAGTGAGCCGAGGTCAT...ATCTATGCGCCTGTAGTCCCAGCTACCCAGGAGGCTGAAGCAGGATAATCGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392027.3 |
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| CDS-3UTR CCA 90 bp | AAGCGATTATCCTGCTTCAGCCTCCTGGGTAGCTGGGACTACAGGCGCATAGATGATGACGACTCGGGCTaGAGGCCAGGCAGGACGACA | + |
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Preference number: 4 (lower is better) Translates to: KRLSCFSLLGSWDYRRIDDDDSG*RPGRTT Trigger: TGTCGTCCTGCCTGGCCTCCAGCCCGAGTCGTCATC...ATCTATGCGCCTGTAGTCCCAGCTACCCAGGAGGCTGAAGCAGGATAATCGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392027.3 |
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| CDS-3UTR CCA 90 bp | GAGCTCCTCGGATCTCAGTTGGGTGCTGAAATTGGCATGTGGGGGTATGGAACGACAACCTGCAGTCCCTaGGGTTGGGGTAGGGAGTCC | + |
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Preference number: 4 (lower is better) Translates to: ELLGSQLGAEIGMWGYGTTTCSP*GWGRES Trigger: GGACTCCCTACCCCAACCCCAGGGACTGCAGGTTGT...CGTTCCATACCCCCACATGCCAATTTCAGCACCCAACTGAGATCCGAGGAGCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000392027.3 |
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| CDS-3UTR CCA 90 bp | GAGCTCCTCGGATCTCAGTTGGGTGCTGAAATTGGCATGTGGGGGTATGGAACGCTGGGGAGGGACCTTTaGCTCTCGACCAGTGTCCTG | + |
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Preference number: 4 (lower is better) Translates to: ELLGSQLGAEIGMWGYGTLGRDL*LSTSVL Trigger: CAGGACACTGGTCGAGAGCCAAAGGTCCCTCCCCAG...CGTTCCATACCCCCACATGCCAATTTCAGCACCCAACTGAGATCCGAGGAGCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000392027.3 |
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| CDS-3UTR CCA 90 bp | GAGCTCCTCGGATCTCAGTTGGGTGCTGAAATTGGCATGTGGGGGTATGGAACGCAGGCTGCAGTGCAGTaGCATGACCTCGGCTCACTG | + |
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Preference number: 4 (lower is better) Translates to: ELLGSQLGAEIGMWGYGTQAAVQ*HDLGSL Trigger: CAGTGAGCCGAGGTCATGCCACTGCACTGCAGCCTG...CGTTCCATACCCCCACATGCCAATTTCAGCACCCAACTGAGATCCGAGGAGCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000392027.3 |
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| CDS-3UTR TCA 90 bp | GTGATTCAAGGACTGAAGCAAAGATCAGCGGGGCGCGGGGTCTGGGTGCTTCTTGGTTACCACTCCCACTaGCTTCCCTGCTTTCTTGGC | + |
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Preference number: 4 (lower is better) Translates to: VIQGLKQRSAGRGVWVLLGYHSH*LPCFLG Trigger: GCCAAGAAAGCAGGGAAGTCAGTGGGAGTGGTAACC...AAGAAGCACCCAGACCCCGCGCCCCGCTGATCTTTGCTTCAGTCCTTGAATCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000392027.3 |
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| CDS-3UTR CCA 90 bp | AAGCGATTATCCTGCTTCAGCCTCCTGGGTAGCTGGGACTACAGGCGCATAGATAGGGCAGCAGGACAGTaGCGAGGCAGGAATTCTGGG | + |
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Preference number: 4 (lower is better) Translates to: KRLSCFSLLGSWDYRRIDRAAGQ*RGRNSG Trigger: CCCAGAATTCCTGCCTCGCCACTGTCCTGCTGCCCT...ATCTATGCGCCTGTAGTCCCAGCTACCCAGGAGGCTGAAGCAGGATAATCGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392027.3 |
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| CDS-3UTR CCA 90 bp | CCCACAGGTGATTCAAGGACTGAAGCAAAGATCAGCGGGGCGCGGGGTCTGGGTGCTGAAATTGGCATGTaGGGGTATGGAACGTCTGAG | + |
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Preference number: 4 (lower is better) Translates to: PTGDSRTEAKISGARGLGAEIGM*GYGTSE Trigger: CTCAGACGTTCCATACCCCCACATGCCAATTTCAGC...ACCCAGACCCCGCGCCCCGCTGATCTTTGCTTCAGTCCTTGAATCACCTGTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000392027.3 |
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| CDS-3UTR TCA 90 bp | GTGATTCAAGGACTGAAGCAAAGATCAGCGGGGCGCGGGGTCTGGGTGCTTCTTGGGGTATGGAACGTCTaGGAAGTTGAGATTTGGGGC | + |
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Preference number: 4 (lower is better) Translates to: VIQGLKQRSAGRGVWVLLGVWNV*EVEIWG Trigger: GCCCCAAATCTCAACTTCTCAGACGTTCCATACCCC...AAGAAGCACCCAGACCCCGCGCCCCGCTGATCTTTGCTTCAGTCCTTGAATCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000392027.3 |
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| CDS-3UTR TCA 90 bp | AAGCGATTATCCTGCTTCAGCCTCCTGGGTAGCTGGGACTACAGGCGCATAGATGCTCAAAGAGACCCATaGGATGGGTCACAGACGGGT | + |
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Preference number: 4 (lower is better) Translates to: KRLSCFSLLGSWDYRRIDAQRDP*DGSQTG Trigger: ACCCGTCTGTGACCCATCTCATGGGTCTCTTTGAGC...ATCTATGCGCCTGTAGTCCCAGCTACCCAGGAGGCTGAAGCAGGATAATCGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392027.3 |
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| CDS-3UTR TCA 90 bp | GTGATTCAAGGACTGAAGCAAAGATCAGCGGGGCGCGGGGTCTGGGTGCTTCTTGAACGTCTGAGAAGTTaGGATTTGGGGCAAGCCTTT | + |
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Preference number: 4 (lower is better) Translates to: VIQGLKQRSAGRGVWVLLERLRS*DLGQAF Trigger: AAAGGCTTGCCCCAAATCTCAACTTCTCAGACGTTC...AAGAAGCACCCAGACCCCGCGCCCCGCTGATCTTTGCTTCAGTCCTTGAATCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000392027.3 |
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| CDS-3UTR TCA 90 bp | AAGCGATTATCCTGCTTCAGCCTCCTGGGTAGCTGGGACTACAGGCGCATAGATATCTCAGTTGGGTGCTaGAATTGGCATGTGGGGGTA | + |
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Preference number: 4 (lower is better) Translates to: KRLSCFSLLGSWDYRRIDISVGC*NWHVGV Trigger: TACCCCCACATGCCAATTTCAGCACCCAACTGAGAT...ATCTATGCGCCTGTAGTCCCAGCTACCCAGGAGGCTGAAGCAGGATAATCGCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000392027.3 |
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| CDS-3UTR GCA 90 bp | AAGCGATTATCCTGCTTCAGCCTCCTGGGTAGCTGGGACTACAGGCGCATAGATTTCAAGCGATTATCCTaGTTCAGCCTCCTGGGTAGC | + |
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Preference number: 4 (lower is better) Translates to: KRLSCFSLLGSWDYRRIDFKRLS*FSLLGS Trigger: GCTACCCAGGAGGCTGAAGCAGGATAATCGCTTGAA...ATCTATGCGCCTGTAGTCCCAGCTACCCAGGAGGCTGAAGCAGGATAATCGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392027.3 |
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| CDS-3UTR CCA 90 bp | TCAAGTCCCACAGGTGATTCAAGGACTGAAGCAAAGATCAGCGGGGCGCGGGGTCTACATTGTATGTCTTaGACAGAGCCACATATGGGA | + |
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Preference number: 4 (lower is better) Translates to: SSPTGDSRTEAKISGARGLHCMS*TEPHMG Trigger: TCCCATATGTGGCTCTGTCCAAGACATACAATGTAG...ACCCCGCGCCCCGCTGATCTTTGCTTCAGTCCTTGAATCACCTGTGGGACTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000392027.3 |
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| CDS-3UTR CCA 90 bp | AAGCGATTATCCTGCTTCAGCCTCCTGGGTAGCTGGGACTACAGGCGCATAGATTCCTCGGATCTCAGTTaGGTGCTGAAATTGGCATGT | + |
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Preference number: 4 (lower is better) Translates to: KRLSCFSLLGSWDYRRIDSSDLS*VLKLAC Trigger: ACATGCCAATTTCAGCACCCAACTGAGATCCGAGGA...ATCTATGCGCCTGTAGTCCCAGCTACCCAGGAGGCTGAAGCAGGATAATCGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392027.3 |
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| CDS CCA 90 bp | GCCCAGCAGCAGCAGCAGCAGCAGCATGCAGGGCCCCAGCATGTCTaGAGGGCAGCAGGACAGTGGCGAGGCAGGAATTCTGGGCATGGA | + |
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Preference number: 5 (lower is better) Translates to: AQQQQQQQHAGPQHV*RAAGQWRGRNSGHG Trigger: TCCATGCCCAGAATTCCTGCCTCGCCACTGTCCTGCTGCCCTCCAGACATGCTGGGGCCCTGCATGCTGCTGCTGCTGCTGCTGCTGGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000392027.3 ENST00000474529.1 |
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| CDS-3UTR CAA 90 bp | GACCTCTGTATAGGGACTCCGGGGATGACGACTCGGGCTGGAGGCCAGGCAGGATCTGGGGAGGGACCTTaGGCTCTCGACCAGTGTCCT | + |
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Preference number: 5 (lower is better) Translates to: DLCIGTPGMTTRAGGQAGSGEGP*ALDQCP Trigger: AGGACACTGGTCGAGAGCCAAAGGTCCCTCCCCAGA...TCCTGCCTGGCCTCCAGCCCGAGTCGTCATCCCCGGAGTCCCTATACAGAGGTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000392027.3 |
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| CDS-3UTR CAA 90 bp | GTGATTCAAGGACTGAAGCAAAGATCAGCGGGGCGCGGGGTCTGGGTGCTTCTTAGCCAAGGGGCAGGTTaGGTGTCATGGGCTCAGTCC | + |
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Preference number: 5 (lower is better) Translates to: VIQGLKQRSAGRGVWVLLSQGAG*VSWAQS Trigger: GGACTGAGCCCATGACACCAAACCTGCCCCTTGGCT...AAGAAGCACCCAGACCCCGCGCCCCGCTGATCTTTGCTTCAGTCCTTGAATCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000392027.3 |
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| CDS-3UTR CAA 90 bp | CCCACAGGTGATTCAAGGACTGAAGCAAAGATCAGCGGGGCGCGGGGTCTGGGTGGAACGTCTGAGAAGTaGAGATTTGGGGCAAGCCTT | + |
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Preference number: 5 (lower is better) Translates to: PTGDSRTEAKISGARGLGGTSEK*RFGASL Trigger: AAGGCTTGCCCCAAATCTCAACTTCTCAGACGTTCC...ACCCAGACCCCGCGCCCCGCTGATCTTTGCTTCAGTCCTTGAATCACCTGTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000392027.3 |
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| CDS-3UTR CAA 90 bp | AAGCGATTATCCTGCTTCAGCCTCCTGGGTAGCTGGGACTACAGGCGCATAGATCTCCTCGGATCTCAGTaGGGTGCTGAAATTGGCATG | + |
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Preference number: 5 (lower is better) Translates to: KRLSCFSLLGSWDYRRIDLLGSQ*GAEIGM Trigger: CATGCCAATTTCAGCACCCAACTGAGATCCGAGGAG...ATCTATGCGCCTGTAGTCCCAGCTACCCAGGAGGCTGAAGCAGGATAATCGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392027.3 |
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| CDS-3UTR CAA 90 bp | GTGATTCAAGGACTGAAGCAAAGATCAGCGGGGCGCGGGGTCTGGGTGCTTCTTTCTACATTGTATGTCTaGGACAGAGCCACATATGGG | + |
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Preference number: 5 (lower is better) Translates to: VIQGLKQRSAGRGVWVLLSTLYV*DRATYG Trigger: CCCATATGTGGCTCTGTCCAAGACATACAATGTAGA...AAGAAGCACCCAGACCCCGCGCCCCGCTGATCTTTGCTTCAGTCCTTGAATCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000392027.3 |
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| CDS-3UTR CAA 90 bp | GTGATTCAAGGACTGAAGCAAAGATCAGCGGGGCGCGGGGTCTGGGTGCTTCTTACATGTTTGTCTACATaGTATGTCTTGGACAGAGCC | + |
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Preference number: 5 (lower is better) Translates to: VIQGLKQRSAGRGVWVLLTCLST*YVLDRA Trigger: GGCTCTGTCCAAGACATACAATGTAGACAAACATGT...AAGAAGCACCCAGACCCCGCGCCCCGCTGATCTTTGCTTCAGTCCTTGAATCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000392027.3 |
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