RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ALPL (Homo sapiens)

Ensembl gene IDs: ENSG00000162551

Ensembl transcript IDs: ENST00000374829.2, ENST00000374830.2, ENST00000374832.5, ENST00000374840.8, ENST00000468526.1, ENST00000539907.5, ENST00000540617.5

Found 539 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCAGAGCCCAGGAGTGTGAGCCCTGCCAGGTGGCTCTTCCCGGCCTaGGCCACGCTGGGTAGGATGGCCACCCAGGCACCGGCTTCCTGG +
Preference number: 1 (lower is better)
Translates to: SEPRSVSPARWLFPA*ATLGRMATQAPASW
Trigger: CCAGGAAGCCGGTGCCTGGGTGGCCATCCTACCCAGCGTGGCCCAGGCCGGGAAGAGCCACCTGGCAGGGCTCACACTCCTGGGCTCTGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374840.8
ENST00000539907.5
3UTR CCA 90 bp AGCTGGCGTGTGTGTTCAGAGCCCAGGAGTGTGAGCCCTGCCAGGTaGCTCTTCCCGGCCTGGGCCACGCTGGGTAGGATGGCCACCCAG +
Preference number: 1 (lower is better)
Translates to: SWRVCSEPRSVSPAR*LFPAWATLGRMATQ
Trigger: CTGGGTGGCCATCCTACCCAGCGTGGCCCAGGCCGGGAAGAGCCACCTGGCAGGGCTCACACTCCTGGGCTCTGAACACACACGCCAGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374840.8
ENST00000539907.5
3UTR TCA 90 bp CAGGCACCGGCTTCCTGGGACCCTGGTGGTCTTGGAGTGAGTGAGTaGGCAAGGCCTTGTCCTGAGGAGAAAGACCTCAACTCCCCTGAA +
Preference number: 1 (lower is better)
Translates to: QAPASWDPGGLGVSE*ARPCPEEKDLNSPE
Trigger: TTCAGGGGAGTTGAGGTCTTTCTCCTCAGGACAAGGCCTTGCTCACTCACTCACTCCAAGACCACCAGGGTCCCAGGAAGCCGGTGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374840.8
ENST00000539907.5
3UTR GCA 90 bp TGGAGAAATACGTTCGCTAGAAAAATAAGAGGCTTTGAGAATGTCTaGAGTCTGTACTCTCTGCCTGCCCAAGAGAAATCTACCCTGTTG +
Preference number: 1 (lower is better)
Translates to: WRNTFARKIRGFENV*SLYSLPAQEKSTLL
Trigger: CAACAGGGTAGATTTCTCTTGGGCAGGCAGAGAGTACAGACTGCAGACATTCTCAAAGCCTCTTATTTTTCTAGCGAACGTATTTCTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
3UTR-3UTR CCA 90 bp AGAAGTGGGTTTGGCCCTTGGGGAAGATTCCAGAGGGGAGCGAGGTGGGCGGCATGCCGTGTGGGAAGTTaGCATCTGTCACGGGCTTGT +
Preference number: 2 (lower is better)
Translates to: RSGFGPWGRFQRGARWAACRVGS*HLSRAC
Trigger: ACAAGCCCGTGACAGATGCCAACTTCCCACACGGCA...TGCCGCCCACCTCGCTCCCCTCTGGAATCTTCCCCAAGGGCCAAACCCACTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
3UTR-3UTR CCA 90 bp GCAAGGCCTTGTCCTGAGGAGAAAGACCTCAACTCCCCTGAAGGAGGGCTGGGCTGCCGTGTGGGAAGTTaGCATCTGTCACGGGCTTGT +
Preference number: 2 (lower is better)
Translates to: ARPCPEEKDLNSPEGGLGCRVGS*HLSRAC
Trigger: ACAAGCCCGTGACAGATGCCAACTTCCCACACGGCA...GCCCAGCCCTCCTTCAGGGGAGTTGAGGTCTTTCTCCTCAGGACAAGGCCTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
3UTR-3UTR CCA 90 bp GGAGGGTCAGATCCAGAATGTTCCACGGAGGCTTCAGGGCCTCTGGGTCTGGAGGGCCAGAAGTGGGTTTaGCCCTTGGGGAAGATTCCA +
Preference number: 2 (lower is better)
Translates to: GGSDPECSTEASGPLGLEGQKWV*PLGKIP
Trigger: TGGAATCTTCCCCAAGGGCCAAACCCACTTCTGGCC...CTCCAGACCCAGAGGCCCTGAAGCCTCCGTGGAACATTCTGGATCTGACCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
3UTR-3UTR CCA 90 bp GCAAGGCCTTGTCCTGAGGAGAAAGACCTCAACTCCCCTGAAGGAGGGCTGGGCAGAAATCTACCCTGTTaGCCAAAGGGCAGCGGGGAG +
Preference number: 2 (lower is better)
Translates to: ARPCPEEKDLNSPEGGLGRNLPC*PKGSGE
Trigger: CTCCCCGCTGCCCTTTGGCCAACAGGGTAGATTTCT...GCCCAGCCCTCCTTCAGGGGAGTTGAGGTCTTTCTCCTCAGGACAAGGCCTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
3UTR-3UTR CCA 90 bp TGCCCAAGAGAAATCTACCCTGTTGGCCAAAGGGCAGCGGGGAGGGAGCAAAGGGTGGGCGGCAGACTTTaGTTTCTTGGGTCCCCTTTC +
Preference number: 2 (lower is better)
Translates to: CPREIYPVGQRAAGREQRVGGRL*FLGSPF
Trigger: GAAAGGGGACCCAAGAAACCAAAGTCTGCCGCCCAC...CCTTTGCTCCCTCCCCGCTGCCCTTTGGCCAACAGGGTAGATTTCTCTTGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
3UTR-3UTR CCA 90 bp CCAGAATGTTCCACGGAGGCTTCAGGGCCTCTGGGTCTGGAGAAATACGTTCGCTGCCGTGTGGGAAGTTaGCATCTGTCACGGGCTTGT +
Preference number: 2 (lower is better)
Translates to: PECSTEASGPLGLEKYVRCRVGS*HLSRAC
Trigger: ACAAGCCCGTGACAGATGCCAACTTCCCACACGGCA...GCGAACGTATTTCTCCAGACCCAGAGGCCCTGAAGCCTCCGTGGAACATTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
3UTR-3UTR CCA 90 bp CCAGAATGTTCCACGGAGGCTTCAGGGCCTCTGGGTCTGGAGAAATACGTTCGCGGCCAGAAGTGGGTTTaGCCCTTGGGGAAGATTCCA +
Preference number: 2 (lower is better)
Translates to: PECSTEASGPLGLEKYVRGQKWV*PLGKIP
Trigger: TGGAATCTTCCCCAAGGGCCAAACCCACTTCTGGCC...GCGAACGTATTTCTCCAGACCCAGAGGCCCTGAAGCCTCCGTGGAACATTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
3UTR-3UTR CCA 90 bp TTCCACGGAGGCTTCAGGGCCTCTGGGTCTGGAGAAATACGTTCGCTAGAAAAAGCTGGAGGCCAGAAGTaGGTTTGGCCCTTGGGGAAG +
Preference number: 2 (lower is better)
Translates to: FHGGFRASGSGEIRSLEKAGGQK*VWPLGK
Trigger: CTTCCCCAAGGGCCAAACCCACTTCTGGCCTCCAGC...TTTTTCTAGCGAACGTATTTCTCCAGACCCAGAGGCCCTGAAGCCTCCGTGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
3UTR-3UTR CCA 90 bp GATCCAGAATGTTCCACGGAGGCTTCAGGGCCTCTGGGTCTGGAGAAATACGTTGGAGGGAGCAAAGGCTaGAGGCCAGAAGTGGGTTTG +
Preference number: 2 (lower is better)
Translates to: DPECSTEASGPLGLEKYVGGSKG*RPEVGL
Trigger: CAAACCCACTTCTGGCCTCCAGCCTTTGCTCCCTCC...AACGTATTTCTCCAGACCCAGAGGCCCTGAAGCCTCCGTGGAACATTCTGGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
3UTR-3UTR CCA 90 bp AGTGAGCAAGGCCTTGTCCTGAGGAGAAAGACCTCAACTCCCCTGAAGGAGGGCAGGCTTCAGGGCCTCTaGGTCTGGAGAAATACGTTC +
Preference number: 2 (lower is better)
Translates to: SEQGLVLRRKTSTPLKEGRLQGL*VWRNTF
Trigger: GAACGTATTTCTCCAGACCCAGAGGCCCTGAAGCCT...GCCCTCCTTCAGGGGAGTTGAGGTCTTTCTCCTCAGGACAAGGCCTTGCTCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
3UTR-3UTR GCA 90 bp AGTGAGCAAGGCCTTGTCCTGAGGAGAAAGACCTCAACTCCCCTGAAGGAGGGCTCTGTACTCTCTGCCTaGCCAAGAGAAATCTACCCT +
Preference number: 2 (lower is better)
Translates to: SEQGLVLRRKTSTPLKEGSVLSA*PREIYP
Trigger: AGGGTAGATTTCTCTTGGGCAGGCAGAGAGTACAGA...GCCCTCCTTCAGGGGAGTTGAGGTCTTTCTCCTCAGGACAAGGCCTTGCTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
3UTR-3UTR CCA 90 bp CCACGGAGGCTTCAGGGCCTCTGGGTCTGGAGAAATACGTTCGCTAGAAAAATAAGTGGGTTTGGCCCTTaGGGAAGATTCCAGAGGGGA +
Preference number: 2 (lower is better)
Translates to: PRRLQGLWVWRNTFARKISGFGP*GRFQRG
Trigger: TCCCCTCTGGAATCTTCCCCAAGGGCCAAACCCACT...TATTTTTCTAGCGAACGTATTTCTCCAGACCCAGAGGCCCTGAAGCCTCCGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
3UTR-3UTR CCA 90 bp GTCTGGAGAAATACGTTCGCTAGAAAAATAAGAGGCTTTGAGAATGTCTGCAGTGGCCAGAAGTGGGTTTaGCCCTTGGGGAAGATTCCA +
Preference number: 2 (lower is better)
Translates to: VWRNTFARKIRGFENVCSGQKWV*PLGKIP
Trigger: TGGAATCTTCCCCAAGGGCCAAACCCACTTCTGGCC...ACTGCAGACATTCTCAAAGCCTCTTATTTTTCTAGCGAACGTATTTCTCCAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
3UTR-3UTR CCA 90 bp AGAAATACGTTCGCTAGAAAAATAAGAGGCTTTGAGAATGTCTGCAGTCTGTACAGAAATCTACCCTGTTaGCCAAAGGGCAGCGGGGAG +
Preference number: 2 (lower is better)
Translates to: RNTFARKIRGFENVCSLYRNLPC*PKGSGE
Trigger: CTCCCCGCTGCCCTTTGGCCAACAGGGTAGATTTCT...GTACAGACTGCAGACATTCTCAAAGCCTCTTATTTTTCTAGCGAACGTATTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
3UTR CCA 72 bp GTGTGTTCAGAGCCCAGGAGTGTGAGCCCTGCCAGGTaGCTCTTCCCGGCCTGGGCCACGCTGGGTAGGATG +
Preference number: 3 (lower is better)
Translates to: VCSEPRSVSPAR*LFPAWATLGRM
Trigger: CATCCTACCCAGCGTGGCCCAGGCCGGGAAGAGCCACCTGGCAGGGCTCACACTCCTGGGCTCTGAACACAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374840.8
ENST00000539907.5
3UTR-3UTR CAA 90 bp TTGGCCCTTGGGGAAGATTCCAGAGGGGAGCGAGGTGGGCGGCAGACTTTGGTTGCATCTGTCACGGGCTaGTGGGTGCCCGGGCCCTGG +
Preference number: 3 (lower is better)
Translates to: LALGEDSRGERGGRQTLVASVTG*WVPGPW
Trigger: CCAGGGCCCGGGCACCCACAAGCCCGTGACAGATGC...AACCAAAGTCTGCCGCCCACCTCGCTCCCCTCTGGAATCTTCCCCAAGGGCCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
3UTR-3UTR CAA 90 bp AGGGGAGCGAGGTGGGCGGCAGACTTTGGTTTCTTGGGTCCCCTTTCTTGCAGTGCATCTGTCACGGGCTaGTGGGTGCCCGGGCCCTGG +
Preference number: 3 (lower is better)
Translates to: RGARWAADFGFLGPLSCSASVTG*WVPGPW
Trigger: CCAGGGCCCGGGCACCCACAAGCCCGTGACAGATGC...ACTGCAAGAAAGGGGACCCAAGAAACCAAAGTCTGCCGCCCACCTCGCTCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
3UTR-3UTR CAA 90 bp TTGGTTTCTTGGGTCCCCTTTCTTGCAGTTGCAGAGGCTGAGGAGGCCCCCACCGCATCTGTCACGGGCTaGTGGGTGCCCGGGCCCTGG +
Preference number: 3 (lower is better)
Translates to: LVSWVPFLAVAEAEEAPTASVTG*WVPGPW
Trigger: CCAGGGCCCGGGCACCCACAAGCCCGTGACAGATGC...GGTGGGGGCCTCCTCAGCCTCTGCAACTGCAAGAAAGGGGACCCAAGAAACCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
3UTR-3UTR CAA 90 bp GTGGGTTTGGCCCTTGGGGAAGATTCCAGAGGGGAGCGAGGTGGGCGGCAGACTCTTGGGTCCCCTTTCTaGCAGTTGCAGAGGCTGAGG +
Preference number: 3 (lower is better)
Translates to: VGLALGEDSRGERGGRQTLGSPF*QLQRLR
Trigger: CCTCAGCCTCTGCAACTGCAAGAAAGGGGACCCAAG...AGTCTGCCGCCCACCTCGCTCCCCTCTGGAATCTTCCCCAAGGGCCAAACCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
3UTR-3UTR CAA 90 bp TCAGATCCAGAATGTTCCACGGAGGCTTCAGGGCCTCTGGGTCTGGAGAAATACGCATCTGTCACGGGCTaGTGGGTGCCCGGGCCCTGG +
Preference number: 3 (lower is better)
Translates to: SDPECSTEASGPLGLEKYASVTG*WVPGPW
Trigger: CCAGGGCCCGGGCACCCACAAGCCCGTGACAGATGC...GTATTTCTCCAGACCCAGAGGCCCTGAAGCCTCCGTGGAACATTCTGGATCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
3UTR-3UTR CAA 90 bp GGAGCGAGGTGGGCGGCAGACTTTGGTTTCTTGGGTCCCCTTTCTTGCAGTTGCCTGCCGTGTGGGAAGTaGGCATCTGTCACGGGCTTG +
Preference number: 3 (lower is better)
Translates to: GARWAADFGFLGPLSCSCLPCGK*ASVTGL
Trigger: CAAGCCCGTGACAGATGCCAACTTCCCACACGGCAG...GCAACTGCAAGAAAGGGGACCCAAGAAACCAAAGTCTGCCGCCCACCTCGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
3UTR-3UTR CAA 90 bp AAGGCTGGAGGCCAGAAGTGGGTTTGGCCCTTGGGGAAGATTCCAGAGGGGAGCGGTGGGCGGCAGACTTaGGTTTCTTGGGTCCCCTTT +
Preference number: 3 (lower is better)
Translates to: KAGGQKWVWPLGKIPEGSGGRQT*VSWVPF
Trigger: AAAGGGGACCCAAGAAACCAAAGTCTGCCGCCCACC...GCTCCCCTCTGGAATCTTCCCCAAGGGCCAAACCCACTTCTGGCCTCCAGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
3UTR-3UTR CAA 90 bp GCCCAAGAGAAATCTACCCTGTTGGCCAAAGGGCAGCGGGGAGGGAGCAAAGGCAGGCCAGAAGTGGGTTaGGCCCTTGGGGAAGATTCC +
Preference number: 3 (lower is better)
Translates to: AQEKSTLLAKGQRGGSKGRPEVG*ALGEDS
Trigger: GGAATCTTCCCCAAGGGCCAAACCCACTTCTGGCCT...GCCTTTGCTCCCTCCCCGCTGCCCTTTGGCCAACAGGGTAGATTTCTCTTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
3UTR CCA 72 bp GCCGTTCCAAACAGGAGAGTCGCTTCAGAGAGGAGCTaGCGTGTGTGTTCAGAGCCCAGGAGTGTGAGCCCT +
Preference number: 3 (lower is better)
Translates to: AVPNRRVASERS*RVCSEPRSVSP
Trigger: AGGGCTCACACTCCTGGGCTCTGAACACACACGCCAGCTCCTCTCTGAAGCGACTCTCCTGTTTGGAACGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374840.8
ENST00000539907.5
3UTR CCA 72 bp TGTACTCTCTGCCTGCCCAAGAGAAATCTACCCTGTTaGCCAAAGGGCAGCGGGGAGGGAGCAAAGGCTGGA +
Preference number: 3 (lower is better)
Translates to: CTLCLPKRNLPC*PKGSGEGAKAG
Trigger: TCCAGCCTTTGCTCCCTCCCCGCTGCCCTTTGGCCAACAGGGTAGATTTCTCTTGGGCAGGCAGAGAGTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
3UTR-3UTR CAA 90 bp CAGATCCAGAATGTTCCACGGAGGCTTCAGGGCCTCTGGGTCTGGAGAAATACGCTTGGGTCCCCTTTCTaGCAGTTGCAGAGGCTGAGG +
Preference number: 3 (lower is better)
Translates to: QIQNVPRRLQGLWVWRNTLGSPF*QLQRLR
Trigger: CCTCAGCCTCTGCAACTGCAAGAAAGGGGACCCAAG...CGTATTTCTCCAGACCCAGAGGCCCTGAAGCCTCCGTGGAACATTCTGGATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
3UTR CCA 72 bp AAGATTCCAGAGGGGAGCGAGGTGGGCGGCAGACTTTaGTTTCTTGGGTCCCCTTTCTTGCAGTTGCAGAGG +
Preference number: 3 (lower is better)
Translates to: KIPEGSEVGGRL*FLGSPFLQLQR
Trigger: CCTCTGCAACTGCAAGAAAGGGGACCCAAGAAACCAAAGTCTGCCGCCCACCTCGCTCCCCTCTGGAATCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
3UTR-3UTR CAA 90 bp GATCCAGAATGTTCCACGGAGGCTTCAGGGCCTCTGGGTCTGGAGAAATACGTTCTTGGGTCCCCTTTCTaGCAGTTGCAGAGGCTGAGG +
Preference number: 3 (lower is better)
Translates to: DPECSTEASGPLGLEKYVLGSPF*QLQRLR
Trigger: CCTCAGCCTCTGCAACTGCAAGAAAGGGGACCCAAG...AACGTATTTCTCCAGACCCAGAGGCCCTGAAGCCTCCGTGGAACATTCTGGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
3UTR-3UTR CAA 90 bp TCAGATCCAGAATGTTCCACGGAGGCTTCAGGGCCTCTGGGTCTGGAGAAATACAGGCCAGAAGTGGGTTaGGCCCTTGGGGAAGATTCC +
Preference number: 3 (lower is better)
Translates to: SDPECSTEASGPLGLEKYRPEVG*ALGEDS
Trigger: GGAATCTTCCCCAAGGGCCAAACCCACTTCTGGCCT...GTATTTCTCCAGACCCAGAGGCCCTGAAGCCTCCGTGGAACATTCTGGATCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
3UTR-3UTR CAA 90 bp CCACGGAGGCTTCAGGGCCTCTGGGTCTGGAGAAATACGTTCGCTAGAAAAATAAAGTGGGTTTGGCCCTaGGGGAAGATTCCAGAGGGG +
Preference number: 3 (lower is better)
Translates to: PRRLQGLWVWRNTFARKIKWVWP*GKIPEG
Trigger: CCCCTCTGGAATCTTCCCCAAGGGCCAAACCCACTT...TATTTTTCTAGCGAACGTATTTCTCCAGACCCAGAGGCCCTGAAGCCTCCGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
3UTR-3UTR CAA 90 bp CCACGGAGGCTTCAGGGCCTCTGGGTCTGGAGAAATACGTTCGCTAGAAAAATAGAGAAATCTACCCTGTaGGCCAAAGGGCAGCGGGGA +
Preference number: 3 (lower is better)
Translates to: PRRLQGLWVWRNTFARKIEKSTL*AKGQRG
Trigger: TCCCCGCTGCCCTTTGGCCAACAGGGTAGATTTCTC...TATTTTTCTAGCGAACGTATTTCTCCAGACCCAGAGGCCCTGAAGCCTCCGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
3UTR CCA 72 bp CAGATCCAGAATGTTCCACGGAGGCTTCAGGGCCTCTaGGTCTGGAGAAATACGTTCGCTAGAAAAATAAGA +
Preference number: 3 (lower is better)
Translates to: QIQNVPRRLQGL*VWRNTFARKIR
Trigger: TCTTATTTTTCTAGCGAACGTATTTCTCCAGACCCAGAGGCCCTGAAGCCTCCGTGGAACATTCTGGATCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
3UTR GCA 72 bp ACGTTCGCTAGAAAAATAAGAGGCTTTGAGAATGTCTaGAGTCTGTACTCTCTGCCTGCCCAAGAGAAATCT +
Preference number: 3 (lower is better)
Translates to: TFARKIRGFENV*SLYSLPAQEKS
Trigger: AGATTTCTCTTGGGCAGGCAGAGAGTACAGACTGCAGACATTCTCAAAGCCTCTTATTTTTCTAGCGAACGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp GGGGCTGCCGTGTGGGAAGTTGGCATCTGTCACGGGCTTGTGGGTGCCCGGGCCACGTCCTCCCCGCCGTaGGTCTCGTGGCGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: GAAVWEVGICHGLVGARATSSPP*VSWRRG
Trigger: GCCCCTGCGCCACGAGACCCACGGCGGGGAGGACGT...GGCCCGGGCACCCACAAGCCCGTGACAGATGCCAACTTCCCACACGGCAGCCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000374830.2
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR GCA 90 bp GGGGGCTGCCGTGTGGGAAGTTGGCATCTGTCACGGGCTTGTGGGTGCCCGGGCTCACGGGCTTGTGGGTaGCCGGGCCCTGGGCCCTCA +
Preference number: 4 (lower is better)
Translates to: GGCRVGSWHLSRACGCPGSRACG*PGPGPS
Trigger: TGAGGGCCCAGGGCCCGGGCACCCACAAGCCCGTGA...GCCCGGGCACCCACAAGCCCGTGACAGATGCCAACTTCCCACACGGCAGCCCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374830.2
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR GCA 90 bp GGGGCTGCCGTGTGGGAAGTTGGCATCTGTCACGGGCTTGTGGGTGCCCGGGCCTCACGGGCTTGTGGGTaGCCGGGCCCTGGGCCCTCA +
Preference number: 4 (lower is better)
Translates to: GAAVWEVGICHGLVGARASRACG*PGPGPS
Trigger: TGAGGGCCCAGGGCCCGGGCACCCACAAGCCCGTGA...GGCCCGGGCACCCACAAGCCCGTGACAGATGCCAACTTCCCACACGGCAGCCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374830.2
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp GGGGCTGCCGTGTGGGAAGTTGGCATCTGTCACGGGCTTGTGGGTGCCCGGGCCCCGCCGTGGGTCTCGTaGCGCAGGGGCACAGCAGAC +
Preference number: 4 (lower is better)
Translates to: GAAVWEVGICHGLVGARAPPWVS*RRGTAD
Trigger: GTCTGCTGTGCCCCTGCGCCACGAGACCCACGGCGG...GGCCCGGGCACCCACAAGCCCGTGACAGATGCCAACTTCCCACACGGCAGCCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000374830.2
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR GCA 90 bp GGGGGCTGCCGTGTGGGAAGTTGGCATCTGTCACGGGCTTGTGGGTGCCCGGGCGGAGGTCAAGCTGCCTaGCTGCCCGATGGCCCGGTC +
Preference number: 4 (lower is better)
Translates to: GGCRVGSWHLSRACGCPGGGQAA*LPDGPV
Trigger: GACCGGGCCATCGGGCAGGCAGGCAGCTTGACCTCC...GCCCGGGCACCCACAAGCCCGTGACAGATGCCAACTTCCCACACGGCAGCCCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374830.2
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR GCA 90 bp GGGGCTGCCGTGTGGGAAGTTGGCATCTGTCACGGGCTTGTGGGTGCCCGGGCCGGAGGTCAAGCTGCCTaGCTGCCCGATGGCCCGGTC +
Preference number: 4 (lower is better)
Translates to: GAAVWEVGICHGLVGARAGGQAA*LPDGPV
Trigger: GACCGGGCCATCGGGCAGGCAGGCAGCTTGACCTCC...GGCCCGGGCACCCACAAGCCCGTGACAGATGCCAACTTCCCACACGGCAGCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374830.2
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR GCA 90 bp GGGGGCTGCCGTGTGGGAAGTTGGCATCTGTCACGGGCTTGTGGGTGCCCGGGCCCGAGGAGGTCAAGCTaGCTGCCTGCCCGATGGCCC +
Preference number: 4 (lower is better)
Translates to: GGCRVGSWHLSRACGCPGPRRSS*LPARWP
Trigger: GGGCCATCGGGCAGGCAGGCAGCTTGACCTCCTCGG...GCCCGGGCACCCACAAGCCCGTGACAGATGCCAACTTCCCACACGGCAGCCCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374830.2
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR GCA 90 bp GGGGGCTGCCGTGTGGGAAGTTGGCATCTGTCACGGGCTTGTGGGTGCCCGGGCACGCCGTGCAGCAGGTaGGCCATGGGGCCCTTGGAG +
Preference number: 4 (lower is better)
Translates to: GGCRVGSWHLSRACGCPGTPCSR*AMGPLE
Trigger: CTCCAAGGGCCCCATGGCGCACCTGCTGCACGGCGT...GCCCGGGCACCCACAAGCCCGTGACAGATGCCAACTTCCCACACGGCAGCCCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000374830.2
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp GGGCTGCCGTGTGGGAAGTTGGCATCTGTCACGGGCTTGTGGGTGCCCGGGCCCGGGCGTAGGCGGCGCTaGGGGTGGCATGGTTCACTC +
Preference number: 4 (lower is better)
Translates to: GLPCGKLASVTGLWVPGPGRRRR*GWHGSL
Trigger: GAGTGAACCATGCCACCCCCAGCGCCGCCTACGCCC...GGGCCCGGGCACCCACAAGCCCGTGACAGATGCCAACTTCCCACACGGCAGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp GGGCTGCCGTGTGGGAAGTTGGCATCTGTCACGGGCTTGTGGGTGCCCGGGCCCTGCCTGCCTGCCCGATaGCCCGGTCCATCTCCACCG +
Preference number: 4 (lower is better)
Translates to: GLPCGKLASVTGLWVPGPCLPAR*PGPSPP
Trigger: CGGTGGAGATGGACCGGGCCATCGGGCAGGCAGGCA...GGGCCCGGGCACCCACAAGCCCGTGACAGATGCCAACTTCCCACACGGCAGCCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374830.2
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp GGGGCTGCCGTGTGGGAAGTTGGCATCTGTCACGGGCTTGTGGGTGCCCGGGCCGGCTGCCTGCCGAGCTaGCAGGAGCACAGTGGCCGA +
Preference number: 4 (lower is better)
Translates to: GAAVWEVGICHGLVGARAGCLPS*QEHSGR
Trigger: TCGGCCACTGTGCTCCTGCCAGCTCGGCAGGCAGCC...GGCCCGGGCACCCACAAGCCCGTGACAGATGCCAACTTCCCACACGGCAGCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374830.2
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR GCA 90 bp GGGGCTGCCGTGTGGGAAGTTGGCATCTGTCACGGGCTTGTGGGTGCCCGGGCCGGCCGTCCAGCCTCGTaGCCCTGGCTTTCTCGTCAC +
Preference number: 4 (lower is better)
Translates to: GAAVWEVGICHGLVGARAGRPAS*PWLSRH
Trigger: GTGACGAGAAAGCCAGGGGCACGAGGCTGGACGGCC...GGCCCGGGCACCCACAAGCCCGTGACAGATGCCAACTTCCCACACGGCAGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR GCA 90 bp GGGCTGCCGTGTGGGAAGTTGGCATCTGTCACGGGCTTGTGGGTGCCCGGGCCCGTCAAGCTGCCTGCCTaGCCGATGGCCCGGTCCATC +
Preference number: 4 (lower is better)
Translates to: GLPCGKLASVTGLWVPGPVKLPA*PMARSI
Trigger: GATGGACCGGGCCATCGGGCAGGCAGGCAGCTTGAC...GGGCCCGGGCACCCACAAGCCCGTGACAGATGCCAACTTCCCACACGGCAGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374830.2
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR GCA 90 bp GGGGGCTGCCGTGTGGGAAGTTGGCATCTGTCACGGGCTTGTGGGTGCCCGGGCGTCAAGCTGCCTGCCTaGCCGATGGCCCGGTCCATC +
Preference number: 4 (lower is better)
Translates to: GGCRVGSWHLSRACGCPGVKLPA*PMARSI
Trigger: GATGGACCGGGCCATCGGGCAGGCAGGCAGCTTGAC...GCCCGGGCACCCACAAGCCCGTGACAGATGCCAACTTCCCACACGGCAGCCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374830.2
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR GCA 90 bp GCTGCCGTGTGGGAAGTTGGCATCTGTCACGGGCTTGTGGGTGCCCGGGCCCTGACGCCGTGCAGCAGGTaGGCCATGGGGCCCTTGGAG +
Preference number: 4 (lower is better)
Translates to: AAVWEVGICHGLVGARALTPCSR*AMGPLE
Trigger: CTCCAAGGGCCCCATGGCGCACCTGCTGCACGGCGT...CAGGGCCCGGGCACCCACAAGCCCGTGACAGATGCCAACTTCCCACACGGCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374830.2
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR GCA 90 bp GCTGCCGTGTGGGAAGTTGGCATCTGTCACGGGCTTGTGGGTGCCCGGGCCCTGTGCTCGTGGACGCCGTaGAGCAGGTGCGCCATGGGG +
Preference number: 4 (lower is better)
Translates to: AAVWEVGICHGLVGARALCSWTP*SRCAMG
Trigger: CCCCATGGCGCACCTGCTGCACGGCGTCCACGAGCA...CAGGGCCCGGGCACCCACAAGCCCGTGACAGATGCCAACTTCCCACACGGCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374830.2
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR GCA 90 bp GGGCTGCCGTGTGGGAAGTTGGCATCTGTCACGGGCTTGTGGGTGCCCGGGCCCGGCCCCGATGCAGGCTaGATACGCCATCACGTGGGG +
Preference number: 4 (lower is better)
Translates to: GLPCGKLASVTGLWVPGPGPDAG*IRHHVG
Trigger: CCCCACGTGATGGCGTATGCAGCCTGCATCGGGGCC...GGGCCCGGGCACCCACAAGCCCGTGACAGATGCCAACTTCCCACACGGCAGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374830.2
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp GCTGCCGTGTGGGAAGTTGGCATCTGTCACGGGCTTGTGGGTGCCCGGGCCCTGGGGCGTAGGCGGCGCTaGGGGTGGCATGGTTCACTC +
Preference number: 4 (lower is better)
Translates to: AAVWEVGICHGLVGARALGRRRR*GWHGSL
Trigger: GAGTGAACCATGCCACCCCCAGCGCCGCCTACGCCC...CAGGGCCCGGGCACCCACAAGCCCGTGACAGATGCCAACTTCCCACACGGCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp GGGGCTGCCGTGTGGGAAGTTGGCATCTGTCACGGGCTTGTGGGTGCCCGGGCCGCGCCATGGGGCCCTTaGAGAAGACGGCCACGTCCT +
Preference number: 4 (lower is better)
Translates to: GAAVWEVGICHGLVGARAAPWGP*RRRPRP
Trigger: AGGACGTGGCCGTCTTCTCCAAGGGCCCCATGGCGC...GGCCCGGGCACCCACAAGCCCGTGACAGATGCCAACTTCCCACACGGCAGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000374830.2
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp GGGCTGCCGTGTGGGAAGTTGGCATCTGTCACGGGCTTGTGGGTGCCCGGGCCCGCAGCAGGTGCGCCATaGGGCCCTTGGAGAAGACGG +
Preference number: 4 (lower is better)
Translates to: GLPCGKLASVTGLWVPGPAAGAP*GPWRRR
Trigger: CCGTCTTCTCCAAGGGCCCCATGGCGCACCTGCTGC...GGGCCCGGGCACCCACAAGCCCGTGACAGATGCCAACTTCCCACACGGCAGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374830.2
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp GGGGCTGCCGTGTGGGAAGTTGGCATCTGTCACGGGCTTGTGGGTGCCCGGGCCCTGGCAGGAGCACAGTaGCCGAGGTTGGCCCCGATG +
Preference number: 4 (lower is better)
Translates to: GAAVWEVGICHGLVGARALAGAQ*PRLAPM
Trigger: CATCGGGGCCAACCTCGGCCACTGTGCTCCTGCCAG...GGCCCGGGCACCCACAAGCCCGTGACAGATGCCAACTTCCCACACGGCAGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000374830.2
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp GGCTGCCGTGTGGGAAGTTGGCATCTGTCACGGGCTTGTGGGTGCCCGGGCCCTGGCTGCCTGCCGAGCTaGCAGGAGCACAGTGGCCGA +
Preference number: 4 (lower is better)
Translates to: GCRVGSWHLSRACGCPGPGCLPS*QEHSGR
Trigger: TCGGCCACTGTGCTCCTGCCAGCTCGGCAGGCAGCC...AGGGCCCGGGCACCCACAAGCCCGTGACAGATGCCAACTTCCCACACGGCAGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374830.2
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp GCTGCCGTGTGGGAAGTTGGCATCTGTCACGGGCTTGTGGGTGCCCGGGCCCTGGGCTGCCTGCCGAGCTaGCAGGAGCACAGTGGCCGA +
Preference number: 4 (lower is better)
Translates to: AAVWEVGICHGLVGARALGCLPS*QEHSGR
Trigger: TCGGCCACTGTGCTCCTGCCAGCTCGGCAGGCAGCC...CAGGGCCCGGGCACCCACAAGCCCGTGACAGATGCCAACTTCCCACACGGCAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374830.2
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR TCA 90 bp GGGCTGCCGTGTGGGAAGTTGGCATCTGTCACGGGCTTGTGGGTGCCCGGGCCCGGGTTGTGGTGGAGCTaGCCCTTGAGGATGCGGGCA +
Preference number: 4 (lower is better)
Translates to: GLPCGKLASVTGLWVPGPGLWWS*PLRMRA
Trigger: TGCCCGCATCCTCAAGGGTCAGCTCCACCACAACCC...GGGCCCGGGCACCCACAAGCCCGTGACAGATGCCAACTTCCCACACGGCAGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000540617.5
CDS-3UTR TCA 90 bp GGCTGCCGTGTGGGAAGTTGGCATCTGTCACGGGCTTGTGGGTGCCCGGGCCCTAGCGCAGGATGGAGGTaGCCTCGTTCCCCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: GCRVGSWHLSRACGCPGPSAGWR*PRSPGW
Trigger: CCACCCAGGGGAACGAGGTCACCTCCATCCTGCGCT...AGGGCCCGGGCACCCACAAGCCCGTGACAGATGCCAACTTCCCACACGGCAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR GCA 90 bp GGGGCTGCCGTGTGGGAAGTTGGCATCTGTCACGGGCTTGTGGGTGCCCGGGCCCGCTTACCCCCACGGTaGCCTCATTGGCCTTCACCC +
Preference number: 4 (lower is better)
Translates to: GAAVWEVGICHGLVGARARLPPR*PHWPSP
Trigger: GGGTGAAGGCCAATGAGGGCACCGTGGGGGTAAGCG...GGCCCGGGCACCCACAAGCCCGTGACAGATGCCAACTTCCCACACGGCAGCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR GCA 90 bp GGGGGCTGCCGTGTGGGAAGTTGGCATCTGTCACGGGCTTGTGGGTGCCCGGGCTCCCCTGGGTGGTGTTaGACCGGGAACGCTCAGTGG +
Preference number: 4 (lower is better)
Translates to: GGCRVGSWHLSRACGCPGSPGWC*TGNAQW
Trigger: CCACTGAGCGTTCCCGGTGCAACACCACCCAGGGGA...GCCCGGGCACCCACAAGCCCGTGACAGATGCCAACTTCCCACACGGCAGCCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp GGCTGCCGTGTGGGAAGTTGGCATCTGTCACGGGCTTGTGGGTGCCCGGGCCCTCACACAGGTAGGCGGTaGCGGTGCCGGCACTGTCAG +
Preference number: 4 (lower is better)
Translates to: GCRVGSWHLSRACGCPGPHTGRR*RCRHCQ
Trigger: CTGACAGTGCCGGCACCGCCACCGCCTACCTGTGTG...AGGGCCCGGGCACCCACAAGCCCGTGACAGATGCCAACTTCCCACACGGCAGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp GCTGCCGTGTGGGAAGTTGGCATCTGTCACGGGCTTGTGGGTGCCCGGGCCCTGAGGCGGCGCTGGGGGTaGCATGGTTCACTCTCGTGG +
Preference number: 4 (lower is better)
Translates to: AAVWEVGICHGLVGARALRRRWG*HGSLSW
Trigger: CCACGAGAGTGAACCATGCCACCCCCAGCGCCGCCT...CAGGGCCCGGGCACCCACAAGCCCGTGACAGATGCCAACTTCCCACACGGCAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp GCTGCCGTGTGGGAAGTTGGCATCTGTCACGGGCTTGTGGGTGCCCGGGCCCTGGCGCCATGGGGCCCTTaGAGAAGACGGCCACGTCCT +
Preference number: 4 (lower is better)
Translates to: AAVWEVGICHGLVGARALAPWGP*RRRPRP
Trigger: AGGACGTGGCCGTCTTCTCCAAGGGCCCCATGGCGC...CAGGGCCCGGGCACCCACAAGCCCGTGACAGATGCCAACTTCCCACACGGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374830.2
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp GCTGCCGTGTGGGAAGTTGGCATCTGTCACGGGCTTGTGGGTGCCCGGGCCCTGCTGGCAGGAGCACAGTaGCCGAGGTTGGCCCCGATG +
Preference number: 4 (lower is better)
Translates to: AAVWEVGICHGLVGARALLAGAQ*PRLAPM
Trigger: CATCGGGGCCAACCTCGGCCACTGTGCTCCTGCCAG...CAGGGCCCGGGCACCCACAAGCCCGTGACAGATGCCAACTTCCCACACGGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374830.2
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp GGGGGCTGCCGTGTGGGAAGTTGGCATCTGTCACGGGCTTGTGGGTGCCCGGGCCAGGCACCGGCTTCCTaGGACCCTGGTGGTCTTGGA +
Preference number: 4 (lower is better)
Translates to: GGCRVGSWHLSRACGCPGQAPAS*DPGGLG
Trigger: TCCAAGACCACCAGGGTCCCAGGAAGCCGGTGCCTG...GCCCGGGCACCCACAAGCCCGTGACAGATGCCAACTTCCCACACGGCAGCCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374840.8
ENST00000539907.5
CDS-3UTR GCA 90 bp GGCTGCCGTGTGGGAAGTTGGCATCTGTCACGGGCTTGTGGGTGCCCGGGCCCTCGCTTACCCCCACGGTaGCCTCATTGGCCTTCACCC +
Preference number: 4 (lower is better)
Translates to: GCRVGSWHLSRACGCPGPRLPPR*PHWPSP
Trigger: GGGTGAAGGCCAATGAGGGCACCGTGGGGGTAAGCG...AGGGCCCGGGCACCCACAAGCCCGTGACAGATGCCAACTTCCCACACGGCAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR GCA 90 bp TGGGTCCCCTTTCTTGCAGTTGCAGAGGCTGAGGAGGCCCCCACCTCCCTGCCCGGCCCCGATGCAGGCTaGATACGCCATCACGTGGGG +
Preference number: 4 (lower is better)
Translates to: WVPFLAVAEAEEAPTSLPGPDAG*IRHHVG
Trigger: CCCCACGTGATGGCGTATGCAGCCTGCATCGGGGCC...GGGCAGGGAGGTGGGGGCCTCCTCAGCCTCTGCAACTGCAAGAAAGGGGACCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR GCA 90 bp GGGCTGCCGTGTGGGAAGTTGGCATCTGTCACGGGCTTGTGGGTGCCCGGGCCCCGAGGTTGGCCCCGATaGAGGCTGCATACGCCATCA +
Preference number: 4 (lower is better)
Translates to: GLPCGKLASVTGLWVPGPRGWPR*RLHTPS
Trigger: TGATGGCGTATGCAGCCTGCATCGGGGCCAACCTCG...GGGCCCGGGCACCCACAAGCCCGTGACAGATGCCAACTTCCCACACGGCAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000374830.2
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR GCA 90 bp GCTGCCGTGTGGGAAGTTGGCATCTGTCACGGGCTTGTGGGTGCCCGGGCCCTGTGCAGCAAGGCTGCCTaGCGAGCTGGCAGGAGCACA +
Preference number: 4 (lower is better)
Translates to: AAVWEVGICHGLVGARALCSKAA*RAGRST
Trigger: TGTGCTCCTGCCAGCTCGGCAGGCAGCCTTGCTGCA...CAGGGCCCGGGCACCCACAAGCCCGTGACAGATGCCAACTTCCCACACGGCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374830.2
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR GCA 90 bp GGCTGGAGGCCAGAAGTGGGTTTGGCCCTTGGGGAAGATTCCAGAGGGGAGCGATCACGGGCTTGTGGGTaGCCGGGCCCTGGGCCCTCA +
Preference number: 4 (lower is better)
Translates to: GWRPEVGLALGEDSRGERSRACG*PGPGPS
Trigger: TGAGGGCCCAGGGCCCGGGCACCCACAAGCCCGTGA...TCGCTCCCCTCTGGAATCTTCCCCAAGGGCCAAACCCACTTCTGGCCTCCAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR GCA 90 bp AGAAGTGGGTTTGGCCCTTGGGGAAGATTCCAGAGGGGAGCGAGGTGGGCGGCATCACGGGCTTGTGGGTaGCCGGGCCCTGGGCCCTCA +
Preference number: 4 (lower is better)
Translates to: RSGFGPWGRFQRGARWAASRACG*PGPGPS
Trigger: TGAGGGCCCAGGGCCCGGGCACCCACAAGCCCGTGA...TGCCGCCCACCTCGCTCCCCTCTGGAATCTTCCCCAAGGGCCAAACCCACTTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp GGGCTGCCGTGTGGGAAGTTGGCATCTGTCACGGGCTTGTGGGTGCCCGGGCCCGTGACCTCGTTCCCCTaGGTGGTGTTGCACCGGGAA +
Preference number: 4 (lower is better)
Translates to: GLPCGKLASVTGLWVPGPVTSFP*VVLHRE
Trigger: TTCCCGGTGCAACACCACCCAGGGGAACGAGGTCAC...GGGCCCGGGCACCCACAAGCCCGTGACAGATGCCAACTTCCCACACGGCAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp GGGCTGCCGTGTGGGAAGTTGGCATCTGTCACGGGCTTGTGGGTGCCCGGGCCCATGTCCTTACAGCCCTaGCTCAAGGCCTCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: GLPCGKLASVTGLWVPGPMSLQP*LKASGG
Trigger: GCCCCCTGAGGCCTTGAGCCAGGGCTGTAAGGACAT...GGGCCCGGGCACCCACAAGCCCGTGACAGATGCCAACTTCCCACACGGCAGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp TCTGCCTGCCCAAGAGAAATCTACCCTGTTGGCCAAAGGGCAGCGGGGAGGGAGACGTCCTCCCCGCCGTaGGTCTCGTGGCGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: SACPREIYPVGQRAAGRETSSPP*VSWRRG
Trigger: GCCCCTGCGCCACGAGACCCACGGCGGGGAGGACGT...CTCCCTCCCCGCTGCCCTTTGGCCAACAGGGTAGATTTCTCTTGGGCAGGCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp TTGGCCCTTGGGGAAGATTCCAGAGGGGAGCGAGGTGGGCGGCAGACTTTGGTTACGTCCTCCCCGCCGTaGGTCTCGTGGCGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: LALGEDSRGERGGRQTLVTSSPP*VSWRRG
Trigger: GCCCCTGCGCCACGAGACCCACGGCGGGGAGGACGT...AACCAAAGTCTGCCGCCCACCTCGCTCCCCTCTGGAATCTTCCCCAAGGGCCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR TCA 90 bp GGGGCTGCCGTGTGGGAAGTTGGCATCTGTCACGGGCTTGTGGGTGCCCGGGCCCACCATCTCGGAGAGTaGCGGGTCCGTCACGTTGTT +
Preference number: 4 (lower is better)
Translates to: GAAVWEVGICHGLVGARAHHLGE*RVRHVV
Trigger: AACAACGTGACGGACCCGTCACTCTCCGAGATGGTG...GGCCCGGGCACCCACAAGCCCGTGACAGATGCCAACTTCCCACACGGCAGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR TCA 90 bp GGGGGCTGCCGTGTGGGAAGTTGGCATCTGTCACGGGCTTGTGGGTGCCCGGGCGGGAATGGTCCGCAGTaGCCACGGTCAGAGTGTCTT +
Preference number: 4 (lower is better)
Translates to: GGCRVGSWHLSRACGCPGGNGPQ*PRSECL
Trigger: AAGACACTCTGACCGTGGTCACTGCGGACCATTCCC...GCCCGGGCACCCACAAGCCCGTGACAGATGCCAACTTCCCACACGGCAGCCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374830.2
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR GCA 90 bp GTGGGTTTGGCCCTTGGGGAAGATTCCAGAGGGGAGCGAGGTGGGCGGCAGACTGGAACGCTCAGTGGCTaGGCTTACCCCCACGGTGCC +
Preference number: 4 (lower is better)
Translates to: VGLALGEDSRGERGGRQTGTLSG*AYPHGA
Trigger: GGCACCGTGGGGGTAAGCGCAGCCACTGAGCGTTCC...AGTCTGCCGCCCACCTCGCTCCCCTCTGGAATCTTCCCCAAGGGCCAAACCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR GCA 90 bp TGCCTGCCCAAGAGAAATCTACCCTGTTGGCCAAAGGGCAGCGGGGAGGGAGCATCACGGGCTTGTGGGTaGCCGGGCCCTGGGCCCTCA +
Preference number: 4 (lower is better)
Translates to: CLPKRNLPCWPKGSGEGASRACG*PGPGPS
Trigger: TGAGGGCCCAGGGCCCGGGCACCCACAAGCCCGTGA...TGCTCCCTCCCCGCTGCCCTTTGGCCAACAGGGTAGATTTCTCTTGGGCAGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp GTTTGGCCCTTGGGGAAGATTCCAGAGGGGAGCGAGGTGGGCGGCAGACTTTGGTGCCTGCCTGCCCGATaGCCCGGTCCATCTCCACCG +
Preference number: 4 (lower is better)
Translates to: VWPLGKIPEGSEVGGRLWCLPAR*PGPSPP
Trigger: CGGTGGAGATGGACCGGGCCATCGGGCAGGCAGGCA...CCAAAGTCTGCCGCCCACCTCGCTCCCCTCTGGAATCTTCCCCAAGGGCCAAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp GCAAGGCCTTGTCCTGAGGAGAAAGACCTCAACTCCCCTGAAGGAGGGCTGGGCCCGCCGTGGGTCTCGTaGCGCAGGGGCACAGCAGAC +
Preference number: 4 (lower is better)
Translates to: ARPCPEEKDLNSPEGGLGPPWVS*RRGTAD
Trigger: GTCTGCTGTGCCCCTGCGCCACGAGACCCACGGCGG...GCCCAGCCCTCCTTCAGGGGAGTTGAGGTCTTTCTCCTCAGGACAAGGCCTTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp AGGGGAGCGAGGTGGGCGGCAGACTTTGGTTTCTTGGGTCCCCTTTCTTGCAGTACGTCCTCCCCGCCGTaGGTCTCGTGGCGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: RGARWAADFGFLGPLSCSTSSPP*VSWRRG
Trigger: GCCCCTGCGCCACGAGACCCACGGCGGGGAGGACGT...ACTGCAAGAAAGGGGACCCAAGAAACCAAAGTCTGCCGCCCACCTCGCTCCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR TCA 90 bp GGGGGCTGCCGTGTGGGAAGTTGGCATCTGTCACGGGCTTGTGGGTGCCCGGGCCCGTGCGGTTCCAGATaGAGTGGGAGTGCTTGTATC +
Preference number: 4 (lower is better)
Translates to: GGCRVGSWHLSRACGCPGPCGSR*SGSACI
Trigger: GATACAAGCACTCCCACTTCATCTGGAACCGCACGG...GCCCGGGCACCCACAAGCCCGTGACAGATGCCAACTTCCCACACGGCAGCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR TCA 90 bp GGCTGCCGTGTGGGAAGTTGGCATCTGTCACGGGCTTGTGGGTGCCCGGGCCCTGGGAATGGTCCGCAGTaGCCACGGTCAGAGTGTCTT +
Preference number: 4 (lower is better)
Translates to: GCRVGSWHLSRACGCPGPGNGPQ*PRSECL
Trigger: AAGACACTCTGACCGTGGTCACTGCGGACCATTCCC...AGGGCCCGGGCACCCACAAGCCCGTGACAGATGCCAACTTCCCACACGGCAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374830.2
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR TCA 90 bp GTTTGGCCCTTGGGGAAGATTCCAGAGGGGAGCGAGGTGGGCGGCAGACTTTGGCAGAGCCCAGGAGTGTaGGCCCTGCCAGGTGGCTCT +
Preference number: 4 (lower is better)
Translates to: VWPLGKIPEGSEVGGRLWQSPGV*ALPGGS
Trigger: AGAGCCACCTGGCAGGGCTCACACTCCTGGGCTCTG...CCAAAGTCTGCCGCCCACCTCGCTCCCCTCTGGAATCTTCCCCAAGGGCCAAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374840.8
ENST00000539907.5
CDS-3UTR GCA 90 bp AGAAGTGGGTTTGGCCCTTGGGGAAGATTCCAGAGGGGAGCGAGGTGGGCGGCAGGCCGTCCAGCCTCGTaGCCCTGGCTTTCTCGTCAC +
Preference number: 4 (lower is better)
Translates to: RSGFGPWGRFQRGARWAAGRPAS*PWLSRH
Trigger: GTGACGAGAAAGCCAGGGGCACGAGGCTGGACGGCC...TGCCGCCCACCTCGCTCCCCTCTGGAATCTTCCCCAAGGGCCAAACCCACTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR GCA 90 bp TGCCTGCCCAAGAGAAATCTACCCTGTTGGCCAAAGGGCAGCGGGGAGGGAGCACCGAGGAGGTCAAGCTaGCTGCCTGCCCGATGGCCC +
Preference number: 4 (lower is better)
Translates to: CLPKRNLPCWPKGSGEGAPRRSS*LPARWP
Trigger: GGGCCATCGGGCAGGCAGGCAGCTTGACCTCCTCGG...TGCTCCCTCCCCGCTGCCCTTTGGCCAACAGGGTAGATTTCTCTTGGGCAGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR GCA 90 bp TTGGCCCTTGGGGAAGATTCCAGAGGGGAGCGAGGTGGGCGGCAGACTTTGGTTTGCTCGTGGACGCCGTaGAGCAGGTGCGCCATGGGG +
Preference number: 4 (lower is better)
Translates to: LALGEDSRGERGGRQTLVCSWTP*SRCAMG
Trigger: CCCCATGGCGCACCTGCTGCACGGCGTCCACGAGCA...AACCAAAGTCTGCCGCCCACCTCGCTCCCCTCTGGAATCTTCCCCAAGGGCCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR GCA 90 bp AGAAGTGGGTTTGGCCCTTGGGGAAGATTCCAGAGGGGAGCGAGGTGGGCGGCAGGCCCCGATGCAGGCTaGATACGCCATCACGTGGGG +
Preference number: 4 (lower is better)
Translates to: RSGFGPWGRFQRGARWAAGPDAG*IRHHVG
Trigger: CCCCACGTGATGGCGTATGCAGCCTGCATCGGGGCC...TGCCGCCCACCTCGCTCCCCTCTGGAATCTTCCCCAAGGGCCAAACCCACTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR GCA 90 bp AGAAGTGGGTTTGGCCCTTGGGGAAGATTCCAGAGGGGAGCGAGGTGGGCGGCACAGGAGTGTGAGCCCTaGCAGGTGGCTCTTCCCGGC +
Preference number: 4 (lower is better)
Translates to: RSGFGPWGRFQRGARWAAQECEP*QVALPG
Trigger: GCCGGGAAGAGCCACCTGGCAGGGCTCACACTCCTG...TGCCGCCCACCTCGCTCCCCTCTGGAATCTTCCCCAAGGGCCAAACCCACTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374840.8
ENST00000539907.5
CDS-3UTR CCA 90 bp GGGGGCTGCCGTGTGGGAAGTTGGCATCTGTCACGGGCTTGTGGGTGCCCGGGCGCACTGTCAGGGACCTaGGCATTGGTGTTGTACGTC +
Preference number: 4 (lower is better)
Translates to: GGCRVGSWHLSRACGCPGALSGT*ALVLYV
Trigger: GACGTACAACACCAATGCCCAGGTCCCTGACAGTGC...GCCCGGGCACCCACAAGCCCGTGACAGATGCCAACTTCCCACACGGCAGCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp GTTTGGCCCTTGGGGAAGATTCCAGAGGGGAGCGAGGTGGGCGGCAGACTTTGGCACACAGGTAGGCGGTaGCGGTGCCGGCACTGTCAG +
Preference number: 4 (lower is better)
Translates to: VWPLGKIPEGSEVGGRLWHTGRR*RCRHCQ
Trigger: CTGACAGTGCCGGCACCGCCACCGCCTACCTGTGTG...CCAAAGTCTGCCGCCCACCTCGCTCCCCTCTGGAATCTTCCCCAAGGGCCAAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp AAGGCTGGAGGCCAGAAGTGGGTTTGGCCCTTGGGGAAGATTCCAGAGGGGAGCGGGCGTAGGCGGCGCTaGGGGTGGCATGGTTCACTC +
Preference number: 4 (lower is better)
Translates to: KAGGQKWVWPLGKIPEGSGRRRR*GWHGSL
Trigger: GAGTGAACCATGCCACCCCCAGCGCCGCCTACGCCC...GCTCCCCTCTGGAATCTTCCCCAAGGGCCAAACCCACTTCTGGCCTCCAGCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp GGGGGCTGCCGTGTGGGAAGTTGGCATCTGTCACGGGCTTGTGGGTGCCCGGGCTTCTTCCGCAGGATCTaGATGGCCACCACCACCATC +
Preference number: 4 (lower is better)
Translates to: GGCRVGSWHLSRACGCPGFFRRI*MATTTI
Trigger: GATGGTGGTGGTGGCCATCCAGATCCTGCGGAAGAA...GCCCGGGCACCCACAAGCCCGTGACAGATGCCAACTTCCCACACGGCAGCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp GGCTGCCGTGTGGGAAGTTGGCATCTGTCACGGGCTTGTGGGTGCCCGGGCCCTGTGAAGACGTGGGAATaGTCCGCAGTGACCACGGTC +
Preference number: 4 (lower is better)
Translates to: GCRVGSWHLSRACGCPGPVKTWE*SAVTTV
Trigger: GACCGTGGTCACTGCGGACCATTCCCACGTCTTCAC...AGGGCCCGGGCACCCACAAGCCCGTGACAGATGCCAACTTCCCACACGGCAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374830.2
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp CCAGAATGTTCCACGGAGGCTTCAGGGCCTCTGGGTCTGGAGAAATACGTTCGCACGTCCTCCCCGCCGTaGGTCTCGTGGCGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: PECSTEASGPLGLEKYVRTSSPP*VSWRRG
Trigger: GCCCCTGCGCCACGAGACCCACGGCGGGGAGGACGT...GCGAACGTATTTCTCCAGACCCAGAGGCCCTGAAGCCTCCGTGGAACATTCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp GTTTGGCCCTTGGGGAAGATTCCAGAGGGGAGCGAGGTGGGCGGCAGACTTTGGGCAGCAGGTGCGCCATaGGGCCCTTGGAGAAGACGG +
Preference number: 4 (lower is better)
Translates to: VWPLGKIPEGSEVGGRLWAAGAP*GPWRRR
Trigger: CCGTCTTCTCCAAGGGCCCCATGGCGCACCTGCTGC...CCAAAGTCTGCCGCCCACCTCGCTCCCCTCTGGAATCTTCCCCAAGGGCCAAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp GGGGCTGCCGTGTGGGAAGTTGGCATCTGTCACGGGCTTGTGGGTGCCCGGGCCTGCCGTGTGGGAAGTTaGCATCTGTCACGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: GAAVWEVGICHGLVGARACRVGS*HLSRAC
Trigger: ACAAGCCCGTGACAGATGCCAACTTCCCACACGGCA...GGCCCGGGCACCCACAAGCCCGTGACAGATGCCAACTTCCCACACGGCAGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374830.2
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp AGGGGAGCGAGGTGGGCGGCAGACTTTGGTTTCTTGGGTCCCCTTTCTTGCAGTCGGCCTGGGCCACGCTaGGTAGGATGGCCACCCAGG +
Preference number: 4 (lower is better)
Translates to: RGARWAADFGFLGPLSCSRPGPR*VGWPPR
Trigger: CCTGGGTGGCCATCCTACCCAGCGTGGCCCAGGCCG...ACTGCAAGAAAGGGGACCCAAGAAACCAAAGTCTGCCGCCCACCTCGCTCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374840.8
ENST00000539907.5
CDS-3UTR CCA 90 bp GGGGCTGCCGTGTGGGAAGTTGGCATCTGTCACGGGCTTGTGGGTGCCCGGGCCCAGGGACCTGGGCATTaGTGTTGTACGTCATCTCCC +
Preference number: 4 (lower is better)
Translates to: GAAVWEVGICHGLVGARAQGPGH*CCTSSP
Trigger: GGGAGATGACGTACAACACCAATGCCCAGGTCCCTG...GGCCCGGGCACCCACAAGCCCGTGACAGATGCCAACTTCCCACACGGCAGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539907.5
CDS-3UTR TCA 90 bp GTTTGGCCCTTGGGGAAGATTCCAGAGGGGAGCGAGGTGGGCGGCAGACTTTGGGGGTTGTGGTGGAGCTaGCCCTTGAGGATGCGGGCA +
Preference number: 4 (lower is better)
Translates to: VWPLGKIPEGSEVGGRLWGLWWS*PLRMRA
Trigger: TGCCCGCATCCTCAAGGGTCAGCTCCACCACAACCC...CCAAAGTCTGCCGCCCACCTCGCTCCCCTCTGGAATCTTCCCCAAGGGCCAAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000540617.5
CDS-3UTR TCA 90 bp GGAGGGTCAGATCCAGAATGTTCCACGGAGGCTTCAGGGCCTCTGGGTCTGGAGAGACCTCAACTCCCCTaGAGGAGGGCTGGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: GGSDPECSTEASGPLGLERPQLP*RRAGPG
Trigger: CCCAGGCCCAGCCCTCCTTCAGGGGAGTTGAGGTCT...CTCCAGACCCAGAGGCCCTGAAGCCTCCGTGGAACATTCTGGATCTGACCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR TCA 90 bp TCTGCCTGCCCAAGAGAAATCTACCCTGTTGGCCAAAGGGCAGCGGGGAGGGAGCAGAGCCCAGGAGTGTaGGCCCTGCCAGGTGGCTCT +
Preference number: 4 (lower is better)
Translates to: SACPREIYPVGQRAAGREQSPGV*ALPGGS
Trigger: AGAGCCACCTGGCAGGGCTCACACTCCTGGGCTCTG...CTCCCTCCCCGCTGCCCTTTGGCCAACAGGGTAGATTTCTCTTGGGCAGGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374840.8
ENST00000539907.5
CDS-3UTR GCA 90 bp TCTGCCTGCCCAAGAGAAATCTACCCTGTTGGCCAAAGGGCAGCGGGGAGGGAGGGAACGCTCAGTGGCTaGGCTTACCCCCACGGTGCC +
Preference number: 4 (lower is better)
Translates to: SACPREIYPVGQRAAGREGTLSG*AYPHGA
Trigger: GGCACCGTGGGGGTAAGCGCAGCCACTGAGCGTTCC...CTCCCTCCCCGCTGCCCTTTGGCCAACAGGGTAGATTTCTCTTGGGCAGGCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR GCA 90 bp AGAAGTGGGTTTGGCCCTTGGGGAAGATTCCAGAGGGGAGCGAGGTGGGCGGCATCCCCTGGGTGGTGTTaGACCGGGAACGCTCAGTGG +
Preference number: 4 (lower is better)
Translates to: RSGFGPWGRFQRGARWAASPGWC*TGNAQW
Trigger: CCACTGAGCGTTCCCGGTGCAACACCACCCAGGGGA...TGCCGCCCACCTCGCTCCCCTCTGGAATCTTCCCCAAGGGCCAAACCCACTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR GCA 90 bp GCTGCCGTGTGGGAAGTTGGCATCTGTCACGGGCTTGTGGGTGCCCGGGCCCTGATCTCCACCGCCTCATaGAGGGCCTGCTTGGCTTTT +
Preference number: 4 (lower is better)
Translates to: AAVWEVGICHGLVGARALISTAS*RACLAF
Trigger: AAAAGCCAAGCAGGCCCTGCATGAGGCGGTGGAGAT...CAGGGCCCGGGCACCCACAAGCCCGTGACAGATGCCAACTTCCCACACGGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374830.2
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR GCA 90 bp GAGGGGAGCGAGGTGGGCGGCAGACTTTGGTTTCTTGGGTCCCCTTTCTTGCAGGTCAAGCTGCCTGCCTaGCCGATGGCCCGGTCCATC +
Preference number: 4 (lower is better)
Translates to: EGSEVGGRLWFLGSPFLQVKLPA*PMARSI
Trigger: GATGGACCGGGCCATCGGGCAGGCAGGCAGCTTGAC...CTGCAAGAAAGGGGACCCAAGAAACCAAAGTCTGCCGCCCACCTCGCTCCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR GCA 90 bp GGAGCGAGGTGGGCGGCAGACTTTGGTTTCTTGGGTCCCCTTTCTTGCAGTTGCGGAGGTCAAGCTGCCTaGCTGCCCGATGGCCCGGTC +
Preference number: 4 (lower is better)
Translates to: GARWAADFGFLGPLSCSCGGQAA*LPDGPV
Trigger: GACCGGGCCATCGGGCAGGCAGGCAGCTTGACCTCC...GCAACTGCAAGAAAGGGGACCCAAGAAACCAAAGTCTGCCGCCCACCTCGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR GCA 90 bp TGCCCAAGAGAAATCTACCCTGTTGGCCAAAGGGCAGCGGGGAGGGAGCAAAGGACGCCGTGCAGCAGGTaGGCCATGGGGCCCTTGGAG +
Preference number: 4 (lower is better)
Translates to: CPREIYPVGQRAAGREQRTPCSR*AMGPLE
Trigger: CTCCAAGGGCCCCATGGCGCACCTGCTGCACGGCGT...CCTTTGCTCCCTCCCCGCTGCCCTTTGGCCAACAGGGTAGATTTCTCTTGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR GCA 90 bp GGAGCGAGGTGGGCGGCAGACTTTGGTTTCTTGGGTCCCCTTTCTTGCAGTTGCTGCTCGTGGACGCCGTaGAGCAGGTGCGCCATGGGG +
Preference number: 4 (lower is better)
Translates to: GARWAADFGFLGPLSCSCCSWTP*SRCAMG
Trigger: CCCCATGGCGCACCTGCTGCACGGCGTCCACGAGCA...GCAACTGCAAGAAAGGGGACCCAAGAAACCAAAGTCTGCCGCCCACCTCGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR GCA 90 bp GGAGGGTCAGATCCAGAATGTTCCACGGAGGCTTCAGGGCCTCTGGGTCTGGAGGGCCCCGATGCAGGCTaGATACGCCATCACGTGGGG +
Preference number: 4 (lower is better)
Translates to: GGSDPECSTEASGPLGLEGPDAG*IRHHVG
Trigger: CCCCACGTGATGGCGTATGCAGCCTGCATCGGGGCC...CTCCAGACCCAGAGGCCCTGAAGCCTCCGTGGAACATTCTGGATCTGACCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp TGCCTGCCCAAGAGAAATCTACCCTGTTGGCCAAAGGGCAGCGGGGAGGGAGCATGCAATCGACGTGGGTaGGAGGGGGTGGGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: CLPKRNLPCWPKGSGEGACNRRG*EGVGWQ
Trigger: CTGCCAGCCCACCCCCTCCCACCCACGTCGATTGCA...TGCTCCCTCCCCGCTGCCCTTTGGCCAACAGGGTAGATTTCTCTTGGGCAGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374832.5
ENST00000374840.8
CDS-3UTR CCA 90 bp AAGGCTGGAGGCCAGAAGTGGGTTTGGCCCTTGGGGAAGATTCCAGAGGGGAGCTGCAATCGACGTGGGTaGGAGGGGGTGGGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: KAGGQKWVWPLGKIPEGSCNRRG*EGVGWQ
Trigger: CTGCCAGCCCACCCCCTCCCACCCACGTCGATTGCA...GCTCCCCTCTGGAATCTTCCCCAAGGGCCAAACCCACTTCTGGCCTCCAGCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374832.5
ENST00000374840.8
CDS-3UTR CCA 90 bp GAGGGGAGCGAGGTGGGCGGCAGACTTTGGTTTCTTGGGTCCCCTTTCTTGCAGCACACAGGTAGGCGGTaGCGGTGCCGGCACTGTCAG +
Preference number: 4 (lower is better)
Translates to: EGSEVGGRLWFLGSPFLQHTGRR*RCRHCQ
Trigger: CTGACAGTGCCGGCACCGCCACCGCCTACCTGTGTG...CTGCAAGAAAGGGGACCCAAGAAACCAAAGTCTGCCGCCCACCTCGCTCCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp AAGGCTGGAGGCCAGAAGTGGGTTTGGCCCTTGGGGAAGATTCCAGAGGGGAGCACCGGGAACGCTCAGTaGCTGCGCTTACCCCCACGG +
Preference number: 4 (lower is better)
Translates to: KAGGQKWVWPLGKIPEGSTGNAQ*LRLPPR
Trigger: CCGTGGGGGTAAGCGCAGCCACTGAGCGTTCCCGGT...GCTCCCCTCTGGAATCTTCCCCAAGGGCCAAACCCACTTCTGGCCTCCAGCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp GGCTGGAGGCCAGAAGTGGGTTTGGCCCTTGGGGAAGATTCCAGAGGGGAGCGACCTCGTTCCCCTGGGTaGTGTTGCACCGGGAACGCT +
Preference number: 4 (lower is better)
Translates to: GWRPEVGLALGEDSRGERPRSPG*CCTGNA
Trigger: AGCGTTCCCGGTGCAACACCACCCAGGGGAACGAGG...TCGCTCCCCTCTGGAATCTTCCCCAAGGGCCAAACCCACTTCTGGCCTCCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp GGCTGGAGGCCAGAAGTGGGTTTGGCCCTTGGGGAAGATTCCAGAGGGGAGCGAGCGCTGGGGGTGGCATaGTTCACTCTCGTGGTGGTC +
Preference number: 4 (lower is better)
Translates to: GWRPEVGLALGEDSRGERALGVA*FTLVVV
Trigger: GACCACCACGAGAGTGAACCATGCCACCCCCAGCGC...TCGCTCCCCTCTGGAATCTTCCCCAAGGGCCAAACCCACTTCTGGCCTCCAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp GCAAGGCCTTGTCCTGAGGAGAAAGACCTCAACTCCCCTGAAGGAGGGCTGGGCAGGCGGCGCTGGGGGTaGCATGGTTCACTCTCGTGG +
Preference number: 4 (lower is better)
Translates to: ARPCPEEKDLNSPEGGLGRRRWG*HGSLSW
Trigger: CCACGAGAGTGAACCATGCCACCCCCAGCGCCGCCT...GCCCAGCCCTCCTTCAGGGGAGTTGAGGTCTTTCTCCTCAGGACAAGGCCTTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp GTGGGTTTGGCCCTTGGGGAAGATTCCAGAGGGGAGCGAGGTGGGCGGCAGACTTCCGCAGGATCTGGATaGCCACCACCACCATCTCGG +
Preference number: 4 (lower is better)
Translates to: VGLALGEDSRGERGGRQTSAGSG*PPPPSR
Trigger: CCGAGATGGTGGTGGTGGCCATCCAGATCCTGCGGA...AGTCTGCCGCCCACCTCGCTCCCCTCTGGAATCTTCCCCAAGGGCCAAACCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp GGGGGCTGCCGTGTGGGAAGTTGGCATCTGTCACGGGCTTGTGGGTGCCCGGGCCCAAATGTGAAGACGTaGGAATGGTCCGCAGTGACC +
Preference number: 4 (lower is better)
Translates to: GGCRVGSWHLSRACGCPGPNVKT*EWSAVT
Trigger: GGTCACTGCGGACCATTCCCACGTCTTCACATTTGG...GCCCGGGCACCCACAAGCCCGTGACAGATGCCAACTTCCCACACGGCAGCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374830.2
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp GGCGGCAGACTTTGGTTTCTTGGGTCCCCTTTCTTGCAGTTGCAGAGGCTGAGGCCGCCGTGGGTCTCGTaGCGCAGGGGCACAGCAGAC +
Preference number: 4 (lower is better)
Translates to: GGRLWFLGSPFLQLQRLRPPWVS*RRGTAD
Trigger: GTCTGCTGTGCCCCTGCGCCACGAGACCCACGGCGG...CCTCAGCCTCTGCAACTGCAAGAAAGGGGACCCAAGAAACCAAAGTCTGCCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp AGTGAGCAAGGCCTTGTCCTGAGGAGAAAGACCTCAACTCCCCTGAAGGAGGGCCCGCCGTGGGTCTCGTaGCGCAGGGGCACAGCAGAC +
Preference number: 4 (lower is better)
Translates to: SEQGLVLRRKTSTPLKEGPPWVS*RRGTAD
Trigger: GTCTGCTGTGCCCCTGCGCCACGAGACCCACGGCGG...GCCCTCCTTCAGGGGAGTTGAGGTCTTTCTCCTCAGGACAAGGCCTTGCTCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp GCCCAAGAGAAATCTACCCTGTTGGCCAAAGGGCAGCGGGGAGGGAGCAAAGGCGCGCCATGGGGCCCTTaGAGAAGACGGCCACGTCCT +
Preference number: 4 (lower is better)
Translates to: AQEKSTLLAKGQRGGSKGAPWGP*RRRPRP
Trigger: AGGACGTGGCCGTCTTCTCCAAGGGCCCCATGGCGC...GCCTTTGCTCCCTCCCCGCTGCCCTTTGGCCAACAGGGTAGATTTCTCTTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp TGCCTGCCCAAGAGAAATCTACCCTGTTGGCCAAAGGGCAGCGGGGAGGGAGCAGCGCCATGGGGCCCTTaGAGAAGACGGCCACGTCCT +
Preference number: 4 (lower is better)
Translates to: CLPKRNLPCWPKGSGEGAAPWGP*RRRPRP
Trigger: AGGACGTGGCCGTCTTCTCCAAGGGCCCCATGGCGC...TGCTCCCTCCCCGCTGCCCTTTGGCCAACAGGGTAGATTTCTCTTGGGCAGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp GGAGGGTCAGATCCAGAATGTTCCACGGAGGCTTCAGGGCCTCTGGGTCTGGAGGCAGCAGGTGCGCCATaGGGCCCTTGGAGAAGACGG +
Preference number: 4 (lower is better)
Translates to: GGSDPECSTEASGPLGLEAAGAP*GPWRRR
Trigger: CCGTCTTCTCCAAGGGCCCCATGGCGCACCTGCTGC...CTCCAGACCCAGAGGCCCTGAAGCCTCCGTGGAACATTCTGGATCTGACCCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp GAGGGGAGCGAGGTGGGCGGCAGACTTTGGTTTCTTGGGTCCCCTTTCTTGCAGGCAGCAGGTGCGCCATaGGGCCCTTGGAGAAGACGG +
Preference number: 4 (lower is better)
Translates to: EGSEVGGRLWFLGSPFLQAAGAP*GPWRRR
Trigger: CCGTCTTCTCCAAGGGCCCCATGGCGCACCTGCTGC...CTGCAAGAAAGGGGACCCAAGAAACCAAAGTCTGCCGCCCACCTCGCTCCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp TTGGCCCTTGGGGAAGATTCCAGAGGGGAGCGAGGTGGGCGGCAGACTTTGGTTGCAGCAGGTGCGCCATaGGGCCCTTGGAGAAGACGG +
Preference number: 4 (lower is better)
Translates to: LALGEDSRGERGGRQTLVAAGAP*GPWRRR
Trigger: CCGTCTTCTCCAAGGGCCCCATGGCGCACCTGCTGC...AACCAAAGTCTGCCGCCCACCTCGCTCCCCTCTGGAATCTTCCCCAAGGGCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp TGCCTGCCCAAGAGAAATCTACCCTGTTGGCCAAAGGGCAGCGGGGAGGGAGCACTGGCAGGAGCACAGTaGCCGAGGTTGGCCCCGATG +
Preference number: 4 (lower is better)
Translates to: CLPKRNLPCWPKGSGEGALAGAQ*PRLAPM
Trigger: CATCGGGGCCAACCTCGGCCACTGTGCTCCTGCCAG...TGCTCCCTCCCCGCTGCCCTTTGGCCAACAGGGTAGATTTCTCTTGGGCAGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp GCTGCCGTGTGGGAAGTTGGCATCTGTCACGGGCTTGTGGGTGCCCGGGCCCTGGTGGGCGGCAGACTTTaGTTTCTTGGGTCCCCTTTC +
Preference number: 4 (lower is better)
Translates to: AAVWEVGICHGLVGARALVGGRL*FLGSPF
Trigger: GAAAGGGGACCCAAGAAACCAAAGTCTGCCGCCCAC...CAGGGCCCGGGCACCCACAAGCCCGTGACAGATGCCAACTTCCCACACGGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp GGGGGCTGCCGTGTGGGAAGTTGGCATCTGTCACGGGCTTGTGGGTGCCCGGGCAGGCTTCAGGGCCTCTaGGTCTGGAGAAATACGTTC +
Preference number: 4 (lower is better)
Translates to: GGCRVGSWHLSRACGCPGRLQGL*VWRNTF
Trigger: GAACGTATTTCTCCAGACCCAGAGGCCCTGAAGCCT...GCCCGGGCACCCACAAGCCCGTGACAGATGCCAACTTCCCACACGGCAGCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp AGAAGTGGGTTTGGCCCTTGGGGAAGATTCCAGAGGGGAGCGAGGTGGGCGGCACAGGCACCGGCTTCCTaGGACCCTGGTGGTCTTGGA +
Preference number: 4 (lower is better)
Translates to: RSGFGPWGRFQRGARWAAQAPAS*DPGGLG
Trigger: TCCAAGACCACCAGGGTCCCAGGAAGCCGGTGCCTG...TGCCGCCCACCTCGCTCCCCTCTGGAATCTTCCCCAAGGGCCAAACCCACTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374840.8
ENST00000539907.5
CDS-3UTR CCA 90 bp TTGGCCCTTGGGGAAGATTCCAGAGGGGAGCGAGGTGGGCGGCAGACTTTGGTTCCACGCTGGGTAGGATaGCCACCCAGGCACCGGCTT +
Preference number: 4 (lower is better)
Translates to: LALGEDSRGERGGRQTLVPRWVG*PPRHRL
Trigger: AAGCCGGTGCCTGGGTGGCCATCCTACCCAGCGTGG...AACCAAAGTCTGCCGCCCACCTCGCTCCCCTCTGGAATCTTCCCCAAGGGCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374840.8
ENST00000539907.5
CDS-3UTR CCA 90 bp AAACAGGAGAGTCGCTTCAGAGAGGAGCTGGCGTGTGTGTTCAGAGCCCAGGAGCGGCCTGGGCCACGCTaGGTAGGATGGCCACCCAGG +
Preference number: 4 (lower is better)
Translates to: KQESRFREELACVFRAQERPGPR*VGWPPR
Trigger: CCTGGGTGGCCATCCTACCCAGCGTGGCCCAGGCCG...CTCCTGGGCTCTGAACACACACGCCAGCTCCTCTCTGAAGCGACTCTCCTGTTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374840.8
ENST00000539907.5
CDS-3UTR CCA 90 bp GAGGGGAGCGAGGTGGGCGGCAGACTTTGGTTTCTTGGGTCCCCTTTCTTGCAGTGGCTCTTCCCGGCCTaGGCCACGCTGGGTAGGATG +
Preference number: 4 (lower is better)
Translates to: EGSEVGGRLWFLGSPFLQWLFPA*ATLGRM
Trigger: CATCCTACCCAGCGTGGCCCAGGCCGGGAAGAGCCA...CTGCAAGAAAGGGGACCCAAGAAACCAAAGTCTGCCGCCCACCTCGCTCCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374840.8
ENST00000539907.5
CDS-3UTR CCA 90 bp TACTCTCTGCCTGCCCAAGAGAAATCTACCCTGTTGGCCAAAGGGCAGCGGGGAGTGAGCCCTGCCAGGTaGCTCTTCCCGGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: YSLPAQEKSTLLAKGQRGVSPAR*LFPAWA
Trigger: GGCCCAGGCCGGGAAGAGCCACCTGGCAGGGCTCAC...TCCCCGCTGCCCTTTGGCCAACAGGGTAGATTTCTCTTGGGCAGGCAGAGAGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374840.8
ENST00000539907.5
CDS-3UTR CCA 90 bp AGTGAGCAAGGCCTTGTCCTGAGGAGAAAGACCTCAACTCCCCTGAAGGAGGGCGTGAGCCCTGCCAGGTaGCTCTTCCCGGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: SEQGLVLRRKTSTPLKEGVSPAR*LFPAWA
Trigger: GGCCCAGGCCGGGAAGAGCCACCTGGCAGGGCTCAC...GCCCTCCTTCAGGGGAGTTGAGGTCTTTCTCCTCAGGACAAGGCCTTGCTCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374840.8
ENST00000539907.5
CDS-3UTR TCA 90 bp GCCCAAGAGAAATCTACCCTGTTGGCCAAAGGGCAGCGGGGAGGGAGCAAAGGCGGGTTGTGGTGGAGCTaGCCCTTGAGGATGCGGGCA +
Preference number: 4 (lower is better)
Translates to: AQEKSTLLAKGQRGGSKGGLWWS*PLRMRA
Trigger: TGCCCGCATCCTCAAGGGTCAGCTCCACCACAACCC...GCCTTTGCTCCCTCCCCGCTGCCCTTTGGCCAACAGGGTAGATTTCTCTTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000540617.5
CDS-3UTR TCA 90 bp AGGGGAGCGAGGTGGGCGGCAGACTTTGGTTTCTTGGGTCCCCTTTCTTGCAGTAGCGCAGGATGGAGGTaGCCTCGTTCCCCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: RGARWAADFGFLGPLSCSSAGWR*PRSPGW
Trigger: CCACCCAGGGGAACGAGGTCACCTCCATCCTGCGCT...ACTGCAAGAAAGGGGACCCAAGAAACCAAAGTCTGCCGCCCACCTCGCTCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR TCA 90 bp GTGGGTTTGGCCCTTGGGGAAGATTCCAGAGGGGAGCGAGGTGGGCGGCAGACTGGGAATGGTCCGCAGTaGCCACGGTCAGAGTGTCTT +
Preference number: 4 (lower is better)
Translates to: VGLALGEDSRGERGGRQTGNGPQ*PRSECL
Trigger: AAGACACTCTGACCGTGGTCACTGCGGACCATTCCC...AGTCTGCCGCCCACCTCGCTCCCCTCTGGAATCTTCCCCAAGGGCCAAACCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR TCA 90 bp GGGGCTGCCGTGTGGGAAGTTGGCATCTGTCACGGGCTTGTGGGTGCCCGGGCCCATACAGGATGGCAGTaGAGGGCTTCTTGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: GAAVWEVGICHGLVGARAHTGWQ*RASCLC
Trigger: ACACAGACAAGAAGCCCTTCACTGCCATCCTGTATG...GGCCCGGGCACCCACAAGCCCGTGACAGATGCCAACTTCCCACACGGCAGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374830.2
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR GCA 90 bp AAGGCTGGAGGCCAGAAGTGGGTTTGGCCCTTGGGGAAGATTCCAGAGGGGAGCTCCCCTGGGTGGTGTTaGACCGGGAACGCTCAGTGG +
Preference number: 4 (lower is better)
Translates to: KAGGQKWVWPLGKIPEGSSPGWC*TGNAQW
Trigger: CCACTGAGCGTTCCCGGTGCAACACCACCCAGGGGA...GCTCCCCTCTGGAATCTTCCCCAAGGGCCAAACCCACTTCTGGCCTCCAGCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR GCA 90 bp TGCCCAAGAGAAATCTACCCTGTTGGCCAAAGGGCAGCGGGGAGGGAGCAAAGGGGCCGTCCAGCCTCGTaGCCCTGGCTTTCTCGTCAC +
Preference number: 4 (lower is better)
Translates to: CPREIYPVGQRAAGREQRGRPAS*PWLSRH
Trigger: GTGACGAGAAAGCCAGGGGCACGAGGCTGGACGGCC...CCTTTGCTCCCTCCCCGCTGCCCTTTGGCCAACAGGGTAGATTTCTCTTGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR GCA 90 bp GGAGCGAGGTGGGCGGCAGACTTTGGTTTCTTGGGTCCCCTTTCTTGCAGTTGCGGCCGTCCAGCCTCGTaGCCCTGGCTTTCTCGTCAC +
Preference number: 4 (lower is better)
Translates to: GARWAADFGFLGPLSCSCGRPAS*PWLSRH
Trigger: GTGACGAGAAAGCCAGGGGCACGAGGCTGGACGGCC...GCAACTGCAAGAAAGGGGACCCAAGAAACCAAAGTCTGCCGCCCACCTCGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR GCA 90 bp GGGCTGCCGTGTGGGAAGTTGGCATCTGTCACGGGCTTGTGGGTGCCCGGGCCCGCTTTTCCTTCATGGTaGCCGTGGTCAATTCTGCCT +
Preference number: 4 (lower is better)
Translates to: GLPCGKLASVTGLWVPGPAFPSW*PWSILP
Trigger: AGGCAGAATTGACCACGGGCACCATGAAGGAAAAGC...GGGCCCGGGCACCCACAAGCCCGTGACAGATGCCAACTTCCCACACGGCAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374830.2
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR GCA 90 bp GGCGGCAGACTTTGGTTTCTTGGGTCCCCTTTCTTGCAGTTGCAGAGGCTGAGGGGAGGTCAAGCTGCCTaGCTGCCCGATGGCCCGGTC +
Preference number: 4 (lower is better)
Translates to: GGRLWFLGSPFLQLQRLRGGQAA*LPDGPV
Trigger: GACCGGGCCATCGGGCAGGCAGGCAGCTTGACCTCC...CCTCAGCCTCTGCAACTGCAAGAAAGGGGACCCAAGAAACCAAAGTCTGCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR GCA 90 bp GGCGGCAGACTTTGGTTTCTTGGGTCCCCTTTCTTGCAGTTGCAGAGGCTGAGGCCGAGGAGGTCAAGCTaGCTGCCTGCCCGATGGCCC +
Preference number: 4 (lower is better)
Translates to: GGRLWFLGSPFLQLQRLRPRRSS*LPARWP
Trigger: GGGCCATCGGGCAGGCAGGCAGCTTGACCTCCTCGG...CCTCAGCCTCTGCAACTGCAAGAAAGGGGACCCAAGAAACCAAAGTCTGCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp GCCCAAGAGAAATCTACCCTGTTGGCCAAAGGGCAGCGGGGAGGGAGCAAAGGCCCTCGTTCCCCTGGGTaGTGTTGCACCGGGAACGCT +
Preference number: 4 (lower is better)
Translates to: AQEKSTLLAKGQRGGSKGPRSPG*CCTGNA
Trigger: AGCGTTCCCGGTGCAACACCACCCAGGGGAACGAGG...GCCTTTGCTCCCTCCCCGCTGCCCTTTGGCCAACAGGGTAGATTTCTCTTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp GGCTGGAGGCCAGAAGTGGGTTTGGCCCTTGGGGAAGATTCCAGAGGGGAGCGAATTTCCCAGCGTCCTTaGCCCAGCGCAGGATGGAGG +
Preference number: 4 (lower is better)
Translates to: GWRPEVGLALGEDSRGERISQRP*PSAGWR
Trigger: CCTCCATCCTGCGCTGGGCCAAGGACGCTGGGAAAT...TCGCTCCCCTCTGGAATCTTCCCCAAGGGCCAAACCCACTTCTGGCCTCCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp GGGCTGCCGTGTGGGAAGTTGGCATCTGTCACGGGCTTGTGGGTGCCCGGGCCCGGTTCACTCTCGTGGTaGTCACAATGCCCACAGATT +
Preference number: 4 (lower is better)
Translates to: GLPCGKLASVTGLWVPGPGSLSW*SQCPQI
Trigger: AATCTGTGGGCATTGTGACCACCACGAGAGTGAACC...GGGCCCGGGCACCCACAAGCCCGTGACAGATGCCAACTTCCCACACGGCAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp CGAGGTGGGCGGCAGACTTTGGTTTCTTGGGTCCCCTTTCTTGCAGTTGCAGAGGGGCGTAGGCGGCGCTaGGGGTGGCATGGTTCACTC +
Preference number: 4 (lower is better)
Translates to: RGGRQTLVSWVPFLAVAEGRRRR*GWHGSL
Trigger: GAGTGAACCATGCCACCCCCAGCGCCGCCTACGCCC...CTCTGCAACTGCAAGAAAGGGGACCCAAGAAACCAAAGTCTGCCGCCCACCTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp CCAGAATGTTCCACGGAGGCTTCAGGGCCTCTGGGTCTGGAGAAATACGTTCGCTGCCTGCCTGCCCGATaGCCCGGTCCATCTCCACCG +
Preference number: 4 (lower is better)
Translates to: PECSTEASGPLGLEKYVRCLPAR*PGPSPP
Trigger: CGGTGGAGATGGACCGGGCCATCGGGCAGGCAGGCA...GCGAACGTATTTCTCCAGACCCAGAGGCCCTGAAGCCTCCGTGGAACATTCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp GGCTGCCGTGTGGGAAGTTGGCATCTGTCACGGGCTTGTGGGTGCCCGGGCCCTCCAAATGTGAAGACGTaGGAATGGTCCGCAGTGACC +
Preference number: 4 (lower is better)
Translates to: GCRVGSWHLSRACGCPGPPNVKT*EWSAVT
Trigger: GGTCACTGCGGACCATTCCCACGTCTTCACATTTGG...AGGGCCCGGGCACCCACAAGCCCGTGACAGATGCCAACTTCCCACACGGCAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374830.2
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp GTCTGTACTCTCTGCCTGCCCAAGAGAAATCTACCCTGTTGGCCAAAGGGCAGCCCGCCGTGGGTCTCGTaGCGCAGGGGCACAGCAGAC +
Preference number: 4 (lower is better)
Translates to: VCTLCLPKRNLPCWPKGSPPWVS*RRGTAD
Trigger: GTCTGCTGTGCCCCTGCGCCACGAGACCCACGGCGG...GCTGCCCTTTGGCCAACAGGGTAGATTTCTCTTGGGCAGGCAGAGAGTACAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp TGCCCAAGAGAAATCTACCCTGTTGGCCAAAGGGCAGCGGGGAGGGAGCAAAGGGCGCCATGGGGCCCTTaGAGAAGACGGCCACGTCCT +
Preference number: 4 (lower is better)
Translates to: CPREIYPVGQRAAGREQRAPWGP*RRRPRP
Trigger: AGGACGTGGCCGTCTTCTCCAAGGGCCCCATGGCGC...CCTTTGCTCCCTCCCCGCTGCCCTTTGGCCAACAGGGTAGATTTCTCTTGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp AGGGTCAGATCCAGAATGTTCCACGGAGGCTTCAGGGCCTCTGGGTCTGGAGAAGGCTGCCTGCCGAGCTaGCAGGAGCACAGTGGCCGA +
Preference number: 4 (lower is better)
Translates to: RVRSRMFHGGFRASGSGEGCLPS*QEHSGR
Trigger: TCGGCCACTGTGCTCCTGCCAGCTCGGCAGGCAGCC...TTCTCCAGACCCAGAGGCCCTGAAGCCTCCGTGGAACATTCTGGATCTGACCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp TGGGTCCCCTTTCTTGCAGTTGCAGAGGCTGAGGAGGCCCCCACCTCCCTGCCCGGCCAGAAGTGGGTTTaGCCCTTGGGGAAGATTCCA +
Preference number: 4 (lower is better)
Translates to: WVPFLAVAEAEEAPTSLPGQKWV*PLGKIP
Trigger: TGGAATCTTCCCCAAGGGCCAAACCCACTTCTGGCC...GGGCAGGGAGGTGGGGGCCTCCTCAGCCTCTGCAACTGCAAGAAAGGGGACCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp GGAGCGAGGTGGGCGGCAGACTTTGGTTTCTTGGGTCCCCTTTCTTGCAGTTGCCCACGCTGGGTAGGATaGCCACCCAGGCACCGGCTT +
Preference number: 4 (lower is better)
Translates to: GARWAADFGFLGPLSCSCPRWVG*PPRHRL
Trigger: AAGCCGGTGCCTGGGTGGCCATCCTACCCAGCGTGG...GCAACTGCAAGAAAGGGGACCCAAGAAACCAAAGTCTGCCGCCCACCTCGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374840.8
ENST00000539907.5
CDS-3UTR CCA 90 bp GCTGCCGTGTGGGAAGTTGGCATCTGTCACGGGCTTGTGGGTGCCCGGGCCCTGCCTTCATGGTGCCCGTaGTCAATTCTGCCTCCCAAT +
Preference number: 4 (lower is better)
Translates to: AAVWEVGICHGLVGARALPSWCP*SILPPN
Trigger: ATTGGGAGGCAGAATTGACCACGGGCACCATGAAGG...CAGGGCCCGGGCACCCACAAGCCCGTGACAGATGCCAACTTCCCACACGGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374830.2
CDS-3UTR TCA 90 bp TACTCTCTGCCTGCCCAAGAGAAATCTACCCTGTTGGCCAAAGGGCAGCGGGGAGGTGGAGCTGACCCTTaGGGATGCGGGCAGCCGTCA +
Preference number: 4 (lower is better)
Translates to: YSLPAQEKSTLLAKGQRGGGADP*GCGQPS
Trigger: TGACGGCTGCCCGCATCCTCAAGGGTCAGCTCCACC...TCCCCGCTGCCCTTTGGCCAACAGGGTAGATTTCTCTTGGGCAGGCAGAGAGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000540617.5
CDS-3UTR TCA 90 bp CGAGGTGGGCGGCAGACTTTGGTTTCTTGGGTCCCCTTTCTTGCAGTTGCAGAGAGCGCAGGATGGAGGTaGCCTCGTTCCCCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: RGGRQTLVSWVPFLAVAESAGWR*PRSPGW
Trigger: CCACCCAGGGGAACGAGGTCACCTCCATCCTGCGCT...CTCTGCAACTGCAAGAAAGGGGACCCAAGAAACCAAAGTCTGCCGCCCACCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR TCA 90 bp GTGGGTTTGGCCCTTGGGGAAGATTCCAGAGGGGAGCGAGGTGGGCGGCAGACTCCGTGCGGTTCCAGATaGAGTGGGAGTGCTTGTATC +
Preference number: 4 (lower is better)
Translates to: VGLALGEDSRGERGGRQTPCGSR*SGSACI
Trigger: GATACAAGCACTCCCACTTCATCTGGAACCGCACGG...AGTCTGCCGCCCACCTCGCTCCCCTCTGGAATCTTCCCCAAGGGCCAAACCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR TCA 90 bp GGCTGGAGGCCAGAAGTGGGTTTGGCCCTTGGGGAAGATTCCAGAGGGGAGCGACACCATCTCGGAGAGTaGCGGGTCCGTCACGTTGTT +
Preference number: 4 (lower is better)
Translates to: GWRPEVGLALGEDSRGERHHLGE*RVRHVV
Trigger: AACAACGTGACGGACCCGTCACTCTCCGAGATGGTG...TCGCTCCCCTCTGGAATCTTCCCCAAGGGCCAAACCCACTTCTGGCCTCCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR TCA 90 bp GGCTGCCGTGTGGGAAGTTGGCATCTGTCACGGGCTTGTGGGTGCCCGGGCCCTTGTATCCACCAAATGTaGAGACGTGGGAATGGTCCG +
Preference number: 4 (lower is better)
Translates to: GCRVGSWHLSRACGCPGPCIHQM*RRGNGP
Trigger: CGGACCATTCCCACGTCTTCACATTTGGTGGATACA...AGGGCCCGGGCACCCACAAGCCCGTGACAGATGCCAACTTCCCACACGGCAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374830.2
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR TCA 90 bp GCTGCCGTGTGGGAAGTTGGCATCTGTCACGGGCTTGTGGGTGCCCGGGCCCTGTGTATCCACCAAATGTaGAGACGTGGGAATGGTCCG +
Preference number: 4 (lower is better)
Translates to: AAVWEVGICHGLVGARALCIHQM*RRGNGP
Trigger: CGGACCATTCCCACGTCTTCACATTTGGTGGATACA...CAGGGCCCGGGCACCCACAAGCCCGTGACAGATGCCAACTTCCCACACGGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374830.2
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR TCA 90 bp GCTGCCGTGTGGGAAGTTGGCATCTGTCACGGGCTTGTGGGTGCCCGGGCCCTGCATACAGGATGGCAGTaGAGGGCTTCTTGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: AAVWEVGICHGLVGARALHTGWQ*RASCLC
Trigger: ACACAGACAAGAAGCCCTTCACTGCCATCCTGTATG...CAGGGCCCGGGCACCCACAAGCCCGTGACAGATGCCAACTTCCCACACGGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374830.2
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR TCA 90 bp GCGAGGTGGGCGGCAGACTTTGGTTTCTTGGGTCCCCTTTCTTGCAGTTGCAGAAGACCTCAACTCCCCTaGAGGAGGGCTGGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: ARWAADFGFLGPLSCSCRRPQLP*RRAGPG
Trigger: CCCAGGCCCAGCCCTCCTTCAGGGGAGTTGAGGTCT...TCTGCAACTGCAAGAAAGGGGACCCAAGAAACCAAAGTCTGCCGCCCACCTCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR GCA 90 bp GCGAGGTGGGCGGCAGACTTTGGTTTCTTGGGTCCCCTTTCTTGCAGTTGCAGAGGAACGCTCAGTGGCTaGGCTTACCCCCACGGTGCC +
Preference number: 4 (lower is better)
Translates to: ARWAADFGFLGPLSCSCRGTLSG*AYPHGA
Trigger: GGCACCGTGGGGGTAAGCGCAGCCACTGAGCGTTCC...TCTGCAACTGCAAGAAAGGGGACCCAAGAAACCAAAGTCTGCCGCCCACCTCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR GCA 90 bp AGGGGAGCGAGGTGGGCGGCAGACTTTGGTTTCTTGGGTCCCCTTTCTTGCAGTTCCCCTGGGTGGTGTTaGACCGGGAACGCTCAGTGG +
Preference number: 4 (lower is better)
Translates to: RGARWAADFGFLGPLSCSSPGWC*TGNAQW
Trigger: CCACTGAGCGTTCCCGGTGCAACACCACCCAGGGGA...ACTGCAAGAAAGGGGACCCAAGAAACCAAAGTCTGCCGCCCACCTCGCTCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR GCA 90 bp TACTCTCTGCCTGCCCAAGAGAAATCTACCCTGTTGGCCAAAGGGCAGCGGGGAGTCAAGCTGCCTGCCTaGCCGATGGCCCGGTCCATC +
Preference number: 4 (lower is better)
Translates to: YSLPAQEKSTLLAKGQRGVKLPA*PMARSI
Trigger: GATGGACCGGGCCATCGGGCAGGCAGGCAGCTTGAC...TCCCCGCTGCCCTTTGGCCAACAGGGTAGATTTCTCTTGGGCAGGCAGAGAGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR GCA 90 bp GGCAGACTTTGGTTTCTTGGGTCCCCTTTCTTGCAGTTGCAGAGGCTGAGGAGGGGAGGTCAAGCTGCCTaGCTGCCCGATGGCCCGGTC +
Preference number: 4 (lower is better)
Translates to: GRLWFLGSPFLQLQRLRRGGQAA*LPDGPV
Trigger: GACCGGGCCATCGGGCAGGCAGGCAGCTTGACCTCC...CCTCCTCAGCCTCTGCAACTGCAAGAAAGGGGACCCAAGAAACCAAAGTCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR GCA 90 bp CAGATCCAGAATGTTCCACGGAGGCTTCAGGGCCTCTGGGTCTGGAGAAATACGACGCCGTGCAGCAGGTaGGCCATGGGGCCCTTGGAG +
Preference number: 4 (lower is better)
Translates to: QIQNVPRRLQGLWVWRNTTPCSR*AMGPLE
Trigger: CTCCAAGGGCCCCATGGCGCACCTGCTGCACGGCGT...CGTATTTCTCCAGACCCAGAGGCCCTGAAGCCTCCGTGGAACATTCTGGATCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR GCA 90 bp TCTGCCTGCCCAAGAGAAATCTACCCTGTTGGCCAAAGGGCAGCGGGGAGGGAGCGAGGTTGGCCCCGATaGAGGCTGCATACGCCATCA +
Preference number: 4 (lower is better)
Translates to: SACPREIYPVGQRAAGRERGWPR*RLHTPS
Trigger: TGATGGCGTATGCAGCCTGCATCGGGGCCAACCTCG...CTCCCTCCCCGCTGCCCTTTGGCCAACAGGGTAGATTTCTCTTGGGCAGGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR GCA 90 bp GGGGGCTGCCGTGTGGGAAGTTGGCATCTGTCACGGGCTTGTGGGTGCCCGGGCGCAGTCTGTACTCTCTaGCTGCCCAAGAGAAATCTA +
Preference number: 4 (lower is better)
Translates to: GGCRVGSWHLSRACGCPGAVCTL*LPKRNL
Trigger: TAGATTTCTCTTGGGCAGGCAGAGAGTACAGACTGC...GCCCGGGCACCCACAAGCCCGTGACAGATGCCAACTTCCCACACGGCAGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR GCA 90 bp TGTACTCTCTGCCTGCCCAAGAGAAATCTACCCTGTTGGCCAAAGGGCAGCGGGCAGGAGTGTGAGCCCTaGCAGGTGGCTCTTCCCGGC +
Preference number: 4 (lower is better)
Translates to: CTLCLPKRNLPCWPKGSGQECEP*QVALPG
Trigger: GCCGGGAAGAGCCACCTGGCAGGGCTCACACTCCTG...CCCGCTGCCCTTTGGCCAACAGGGTAGATTTCTCTTGGGCAGGCAGAGAGTACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374840.8
ENST00000539907.5
CDS-3UTR CCA 90 bp TGCCCAAGAGAAATCTACCCTGTTGGCCAAAGGGCAGCGGGGAGGGAGCAAAGGGAGATGCAATCGACGTaGGTGGGAGGGGGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: CPREIYPVGQRAAGREQREMQST*VGGGGL
Trigger: CAGCCCACCCCCTCCCACCCACGTCGATTGCATCTC...CCTTTGCTCCCTCCCCGCTGCCCTTTGGCCAACAGGGTAGATTTCTCTTGGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374832.5
ENST00000374840.8
CDS-3UTR CCA 90 bp AGGGGAGCGAGGTGGGCGGCAGACTTTGGTTTCTTGGGTCCCCTTTCTTGCAGTGAGATGCAATCGACGTaGGTGGGAGGGGGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: RGARWAADFGFLGPLSCSEMQST*VGGGGL
Trigger: CAGCCCACCCCCTCCCACCCACGTCGATTGCATCTC...ACTGCAAGAAAGGGGACCCAAGAAACCAAAGTCTGCCGCCCACCTCGCTCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374832.5
ENST00000374840.8
CDS-3UTR CCA 90 bp TTGGCCCTTGGGGAAGATTCCAGAGGGGAGCGAGGTGGGCGGCAGACTTTGGTTCCACGGTGCCCTCATTaGCCTTCACCCCACACAGGT +
Preference number: 4 (lower is better)
Translates to: LALGEDSRGERGGRQTLVPRCPH*PSPHTG
Trigger: ACCTGTGTGGGGTGAAGGCCAATGAGGGCACCGTGG...AACCAAAGTCTGCCGCCCACCTCGCTCCCCTCTGGAATCTTCCCCAAGGGCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp TTGGGGAAGATTCCAGAGGGGAGCGAGGTGGGCGGCAGACTTTGGTTTCTTGGGCCTCGTTCCCCTGGGTaGTGTTGCACCGGGAACGCT +
Preference number: 4 (lower is better)
Translates to: LGKIPEGSEVGGRLWFLGPRSPG*CCTGNA
Trigger: AGCGTTCCCGGTGCAACACCACCCAGGGGAACGAGG...CCCAAGAAACCAAAGTCTGCCGCCCACCTCGCTCCCCTCTGGAATCTTCCCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp TGCCTGCCCAAGAGAAATCTACCCTGTTGGCCAAAGGGCAGCGGGGAGGGAGCAGTGACCTCGTTCCCCTaGGTGGTGTTGCACCGGGAA +
Preference number: 4 (lower is better)
Translates to: CLPKRNLPCWPKGSGEGAVTSFP*VVLHRE
Trigger: TTCCCGGTGCAACACCACCCAGGGGAACGAGGTCAC...TGCTCCCTCCCCGCTGCCCTTTGGCCAACAGGGTAGATTTCTCTTGGGCAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp TCTGCCTGCCCAAGAGAAATCTACCCTGTTGGCCAAAGGGCAGCGGGGAGGGAGGTGACCTCGTTCCCCTaGGTGGTGTTGCACCGGGAA +
Preference number: 4 (lower is better)
Translates to: SACPREIYPVGQRAAGREVTSFP*VVLHRE
Trigger: TTCCCGGTGCAACACCACCCAGGGGAACGAGGTCAC...CTCCCTCCCCGCTGCCCTTTGGCCAACAGGGTAGATTTCTCTTGGGCAGGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp AAGGCTGGAGGCCAGAAGTGGGTTTGGCCCTTGGGGAAGATTCCAGAGGGGAGCATTTCCCAGCGTCCTTaGCCCAGCGCAGGATGGAGG +
Preference number: 4 (lower is better)
Translates to: KAGGQKWVWPLGKIPEGSISQRP*PSAGWR
Trigger: CCTCCATCCTGCGCTGGGCCAAGGACGCTGGGAAAT...GCTCCCCTCTGGAATCTTCCCCAAGGGCCAAACCCACTTCTGGCCTCCAGCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp AGGGGAGCGAGGTGGGCGGCAGACTTTGGTTTCTTGGGTCCCCTTTCTTGCAGTGCGCTGGGGGTGGCATaGTTCACTCTCGTGGTGGTC +
Preference number: 4 (lower is better)
Translates to: RGARWAADFGFLGPLSCSALGVA*FTLVVV
Trigger: GACCACCACGAGAGTGAACCATGCCACCCCCAGCGC...ACTGCAAGAAAGGGGACCCAAGAAACCAAAGTCTGCCGCCCACCTCGCTCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp AAACAGGAGAGTCGCTTCAGAGAGGAGCTGGCGTGTGTGTTCAGAGCCCAGGAGAGGCGGCGCTGGGGGTaGCATGGTTCACTCTCGTGG +
Preference number: 4 (lower is better)
Translates to: KQESRFREELACVFRAQERRRWG*HGSLSW
Trigger: CCACGAGAGTGAACCATGCCACCCCCAGCGCCGCCT...CTCCTGGGCTCTGAACACACACGCCAGCTCCTCTCTGAAGCGACTCTCCTGTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374840.8
ENST00000539907.5
CDS-3UTR CCA 90 bp GCCCAAGAGAAATCTACCCTGTTGGCCAAAGGGCAGCGGGGAGGGAGCAAAGGCATGTCCTTACAGCCCTaGCTCAAGGCCTCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: AQEKSTLLAKGQRGGSKGMSLQP*LKASGG
Trigger: GCCCCCTGAGGCCTTGAGCCAGGGCTGTAAGGACAT...GCCTTTGCTCCCTCCCCGCTGCCCTTTGGCCAACAGGGTAGATTTCTCTTGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp TGCCTGCCCAAGAGAAATCTACCCTGTTGGCCAAAGGGCAGCGGGGAGGGAGCAATGTCCTTACAGCCCTaGCTCAAGGCCTCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: CLPKRNLPCWPKGSGEGAMSLQP*LKASGG
Trigger: GCCCCCTGAGGCCTTGAGCCAGGGCTGTAAGGACAT...TGCTCCCTCCCCGCTGCCCTTTGGCCAACAGGGTAGATTTCTCTTGGGCAGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp AAGGCTGGAGGCCAGAAGTGGGTTTGGCCCTTGGGGAAGATTCCAGAGGGGAGCATGTCCTTACAGCCCTaGCTCAAGGCCTCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: KAGGQKWVWPLGKIPEGSMSLQP*LKASGG
Trigger: GCCCCCTGAGGCCTTGAGCCAGGGCTGTAAGGACAT...GCTCCCCTCTGGAATCTTCCCCAAGGGCCAAACCCACTTCTGGCCTCCAGCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp GCTGCCGTGTGGGAAGTTGGCATCTGTCACGGGCTTGTGGGTGCCCGGGCCCTGCGGTTCCAGATGAAGTaGGAGTGCTTGTATCTCGGT +
Preference number: 4 (lower is better)
Translates to: AAVWEVGICHGLVGARALRFQMK*ECLYLG
Trigger: ACCGAGATACAAGCACTCCCACTTCATCTGGAACCG...CAGGGCCCGGGCACCCACAAGCCCGTGACAGATGCCAACTTCCCACACGGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp GAGGGGAGCGAGGTGGGCGGCAGACTTTGGTTTCTTGGGTCCCCTTTCTTGCAGTCCGCAGGATCTGGATaGCCACCACCACCATCTCGG +
Preference number: 4 (lower is better)
Translates to: EGSEVGGRLWFLGSPFLQSAGSG*PPPPSR
Trigger: CCGAGATGGTGGTGGTGGCCATCCAGATCCTGCGGA...CTGCAAGAAAGGGGACCCAAGAAACCAAAGTCTGCCGCCCACCTCGCTCCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp GGAGGGTCAGATCCAGAATGTTCCACGGAGGCTTCAGGGCCTCTGGGTCTGGAGTCCGCAGGATCTGGATaGCCACCACCACCATCTCGG +
Preference number: 4 (lower is better)
Translates to: GGSDPECSTEASGPLGLESAGSG*PPPPSR
Trigger: CCGAGATGGTGGTGGTGGCCATCCAGATCCTGCGGA...CTCCAGACCCAGAGGCCCTGAAGCCTCCGTGGAACATTCTGGATCTGACCCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp GGGGGCTGCCGTGTGGGAAGTTGGCATCTGTCACGGGCTTGTGGGTGCCCGGGCTTGGCTTTTCCTTCATaGTGCCCGTGGTCAATTCTG +
Preference number: 4 (lower is better)
Translates to: GGCRVGSWHLSRACGCPGLAFPS*CPWSIL
Trigger: CAGAATTGACCACGGGCACCATGAAGGAAAAGCCAA...GCCCGGGCACCCACAAGCCCGTGACAGATGCCAACTTCCCACACGGCAGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000374830.2
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp GGGGCTGCCGTGTGGGAAGTTGGCATCTGTCACGGGCTTGTGGGTGCCCGGGCCTTGGCTTTTCCTTCATaGTGCCCGTGGTCAATTCTG +
Preference number: 4 (lower is better)
Translates to: GAAVWEVGICHGLVGARALAFPS*CPWSIL
Trigger: CAGAATTGACCACGGGCACCATGAAGGAAAAGCCAA...GGCCCGGGCACCCACAAGCCCGTGACAGATGCCAACTTCCCACACGGCAGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000374830.2
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp GGGCTGCCGTGTGGGAAGTTGGCATCTGTCACGGGCTTGTGGGTGCCCGGGCCCTTGGCTTTTCCTTCATaGTGCCCGTGGTCAATTCTG +
Preference number: 4 (lower is better)
Translates to: GLPCGKLASVTGLWVPGPLAFPS*CPWSIL
Trigger: CAGAATTGACCACGGGCACCATGAAGGAAAAGCCAA...GGGCCCGGGCACCCACAAGCCCGTGACAGATGCCAACTTCCCACACGGCAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374830.2
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp TCTGTACTCTCTGCCTGCCCAAGAGAAATCTACCCTGTTGGCCAAAGGGCAGCGTGCCTGCCTGCCCGATaGCCCGGTCCATCTCCACCG +
Preference number: 4 (lower is better)
Translates to: SVLSACPREIYPVGQRAACLPAR*PGPSPP
Trigger: CGGTGGAGATGGACCGGGCCATCGGGCAGGCAGGCA...CGCTGCCCTTTGGCCAACAGGGTAGATTTCTCTTGGGCAGGCAGAGAGTACAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp GTGGGTTTGGCCCTTGGGGAAGATTCCAGAGGGGAGCGAGGTGGGCGGCAGACTTGCCGTGTGGGAAGTTaGCATCTGTCACGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: VGLALGEDSRGERGGRQTCRVGS*HLSRAC
Trigger: ACAAGCCCGTGACAGATGCCAACTTCCCACACGGCA...AGTCTGCCGCCCACCTCGCTCCCCTCTGGAATCTTCCCCAAGGGCCAAACCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp TGGGTCCCCTTTCTTGCAGTTGCAGAGGCTGAGGAGGCCCCCACCTCCCTGCCCCAGGGCCTCTGGGTCTaGAGAAATACGTTCGCTAGA +
Preference number: 4 (lower is better)
Translates to: WVPFLAVAEAEEAPTSLPQGLWV*RNTFAR
Trigger: TCTAGCGAACGTATTTCTCCAGACCCAGAGGCCCTG...GGGCAGGGAGGTGGGGGCCTCCTCAGCCTCTGCAACTGCAAGAAAGGGGACCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp GGGGCTGCCGTGTGGGAAGTTGGCATCTGTCACGGGCTTGTGGGTGCCCGGGCCAGGAAGGCTCCAGGATaGTCACTCACTCATTCCAAT +
Preference number: 4 (lower is better)
Translates to: GAAVWEVGICHGLVGARARKAPG*SLTHSN
Trigger: ATTGGAATGAGTGAGTGACCATCCTGGAGCCTTCCT...GGCCCGGGCACCCACAAGCCCGTGACAGATGCCAACTTCCCACACGGCAGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374832.5
CDS-3UTR CCA 90 bp TGTACTCTCTGCCTGCCCAAGAGAAATCTACCCTGTTGGCCAAAGGGCAGCGGGCTCTGCGCAGAGCACTaGCGAGGGTCCGTCCAGGCA +
Preference number: 4 (lower is better)
Translates to: CTLCLPKRNLPCWPKGSGLCAEH*RGSVQA
Trigger: TGCCTGGACGGACCCTCGCCAGTGCTCTGCGCAGAG...CCCGCTGCCCTTTGGCCAACAGGGTAGATTTCTCTTGGGCAGGCAGAGAGTACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539907.5
ENST00000540617.5
CDS-3UTR TCA 90 bp GGCTGCCGTGTGGGAAGTTGGCATCTGTCACGGGCTTGTGGGTGCCCGGGCCCTTTGGTGTTGAGCTTCTaGAGCTCCAGGGCATATTTC +
Preference number: 4 (lower is better)
Translates to: GCRVGSWHLSRACGCPGPLVLSF*SSRAYF
Trigger: GAAATATGCCCTGGAGCTTCAGAAGCTCAACACCAA...AGGGCCCGGGCACCCACAAGCCCGTGACAGATGCCAACTTCCCACACGGCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR TCA 90 bp TCTGTACTCTCTGCCTGCCCAAGAGAAATCTACCCTGTTGGCCAAAGGGCAGCGGGTGGAGCTGACCCTTaGGGATGCGGGCAGCCGTCA +
Preference number: 4 (lower is better)
Translates to: SVLSACPREIYPVGQRAAGGADP*GCGQPS
Trigger: TGACGGCTGCCCGCATCCTCAAGGGTCAGCTCCACC...CGCTGCCCTTTGGCCAACAGGGTAGATTTCTCTTGGGCAGGCAGAGAGTACAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000540617.5
CDS-3UTR TCA 90 bp TTGGGGAAGATTCCAGAGGGGAGCGAGGTGGGCGGCAGACTTTGGTTTCTTGGGGGGCATCTCGTTGTCTaGGTACCAGTCCCGGTCAGC +
Preference number: 4 (lower is better)
Translates to: LGKIPEGSEVGGRLWFLGGHLVV*VPVPVS
Trigger: GCTGACCGGGACTGGTACTCAGACAACGAGATGCCC...CCCAAGAAACCAAAGTCTGCCGCCCACCTCGCTCCCCTCTGGAATCTTCCCCAA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR TCA 90 bp CAGATCCAGAATGTTCCACGGAGGCTTCAGGGCCTCTGGGTCTGGAGAAATACGAGACCTCAACTCCCCTaGAGGAGGGCTGGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: QIQNVPRRLQGLWVWRNTRPQLP*RRAGPG
Trigger: CCCAGGCCCAGCCCTCCTTCAGGGGAGTTGAGGTCT...CGTATTTCTCCAGACCCAGAGGCCCTGAAGCCTCCGTGGAACATTCTGGATCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR GCA 90 bp GGGGGCTGCCGTGTGGGAAGTTGGCATCTGTCACGGGCTTGTGGGTGCCCGGGCATGGTGAAATCATGGTaGACCCCAAGACCTGCTTTA +
Preference number: 4 (lower is better)
Translates to: GGCRVGSWHLSRACGCPGMVKSW*TPRPAL
Trigger: TAAAGCAGGTCTTGGGGTGCACCATGATTTCACCAT...GCCCGGGCACCCACAAGCCCGTGACAGATGCCAACTTCCCACACGGCAGCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374832.5
ENST00000374840.8
CDS-3UTR GCA 90 bp AGAAGTGGGTTTGGCCCTTGGGGAAGATTCCAGAGGGGAGCGAGGTGGGCGGCAGCCCGTGGTCAATTCTaGCTCCTTCCACCAGCAAGA +
Preference number: 4 (lower is better)
Translates to: RSGFGPWGRFQRGARWAAARGQF*LLPPAR
Trigger: TCTTGCTGGTGGAAGGAGGCAGAATTGACCACGGGC...TGCCGCCCACCTCGCTCCCCTCTGGAATCTTCCCCAAGGGCCAAACCCACTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR GCA 90 bp GTTTGGCCCTTGGGGAAGATTCCAGAGGGGAGCGAGGTGGGCGGCAGACTTTGGGCCCGTGGTCAATTCTaGCTCCTTCCACCAGCAAGA +
Preference number: 4 (lower is better)
Translates to: VWPLGKIPEGSEVGGRLWARGQF*LLPPAR
Trigger: TCTTGCTGGTGGAAGGAGGCAGAATTGACCACGGGC...CCAAAGTCTGCCGCCCACCTCGCTCCCCTCTGGAATCTTCCCCAAGGGCCAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR GCA 90 bp CAGATCCAGAATGTTCCACGGAGGCTTCAGGGCCTCTGGGTCTGGAGAAATACGGTCAAGCTGCCTGCCTaGCCGATGGCCCGGTCCATC +
Preference number: 4 (lower is better)
Translates to: QIQNVPRRLQGLWVWRNTVKLPA*PMARSI
Trigger: GATGGACCGGGCCATCGGGCAGGCAGGCAGCTTGAC...CGTATTTCTCCAGACCCAGAGGCCCTGAAGCCTCCGTGGAACATTCTGGATCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR GCA 90 bp AGGGGAGCGAGGTGGGCGGCAGACTTTGGTTTCTTGGGTCCCCTTTCTTGCAGTCGAGGTTGGCCCCGATaGAGGCTGCATACGCCATCA +
Preference number: 4 (lower is better)
Translates to: RGARWAADFGFLGPLSCSRGWPR*RLHTPS
Trigger: TGATGGCGTATGCAGCCTGCATCGGGGCCAACCTCG...ACTGCAAGAAAGGGGACCCAAGAAACCAAAGTCTGCCGCCCACCTCGCTCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR GCA 90 bp CGAGGTGGGCGGCAGACTTTGGTTTCTTGGGTCCCCTTTCTTGCAGTTGCAGAGTGCAGCAAGGCTGCCTaGCGAGCTGGCAGGAGCACA +
Preference number: 4 (lower is better)
Translates to: RGGRQTLVSWVPFLAVAECSKAA*RAGRST
Trigger: TGTGCTCCTGCCAGCTCGGCAGGCAGCCTTGCTGCA...CTCTGCAACTGCAAGAAAGGGGACCCAAGAAACCAAAGTCTGCCGCCCACCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp GGCAGACTTTGGTTTCTTGGGTCCCCTTTCTTGCAGTTGCAGAGGCTGAGGAGGTCCTGCGCAGAGCACTaGCGAGGGTCCGTCCAGGCA +
Preference number: 4 (lower is better)
Translates to: GRLWFLGSPFLQLQRLRRSCAEH*RGSVQA
Trigger: TGCCTGGACGGACCCTCGCCAGTGCTCTGCGCAGGA...CCTCCTCAGCCTCTGCAACTGCAAGAAAGGGGACCCAAGAAACCAAAGTCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374840.8
CDS-3UTR CCA 90 bp GGCTGGAGGCCAGAAGTGGGTTTGGCCCTTGGGGAAGATTCCAGAGGGGAGCGAAGTGTCTCTTGCGCTTaGTCTCGCCAGTACTTGGGG +
Preference number: 4 (lower is better)
Translates to: GWRPEVGLALGEDSRGERSVSCA*SRQYLG
Trigger: CCCCAAGTACTGGCGAGACCAAGCGCAAGAGACACT...TCGCTCCCCTCTGGAATCTTCCCCAAGGGCCAAACCCACTTCTGGCCTCCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp TTGGGGAAGATTCCAGAGGGGAGCGAGGTGGGCGGCAGACTTTGGTTTCTTGGGGGGCAGCCGTCACTGTaGAGACACCCATCCCATCTC +
Preference number: 4 (lower is better)
Translates to: LGKIPEGSEVGGRLWFLGGQPSL*RHPSHL
Trigger: GAGATGGGATGGGTGTCTCCACAGTGACGGCTGCCC...CCCAAGAAACCAAAGTCTGCCGCCCACCTCGCTCCCCTCTGGAATCTTCCCCAA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000540617.5
CDS-3UTR CCA 90 bp AGAAGTGGGTTTGGCCCTTGGGGAAGATTCCAGAGGGGAGCGAGGTGGGCGGCAGCACTGTCAGGGACCTaGGCATTGGTGTTGTACGTC +
Preference number: 4 (lower is better)
Translates to: RSGFGPWGRFQRGARWAAALSGT*ALVLYV
Trigger: GACGTACAACACCAATGCCCAGGTCCCTGACAGTGC...TGCCGCCCACCTCGCTCCCCTCTGGAATCTTCCCCAAGGGCCAAACCCACTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp TTGGGGAAGATTCCAGAGGGGAGCGAGGTGGGCGGCAGACTTTGGTTTCTTGGGCCACGGTGCCCTCATTaGCCTTCACCCCACACAGGT +
Preference number: 4 (lower is better)
Translates to: LGKIPEGSEVGGRLWFLGPRCPH*PSPHTG
Trigger: ACCTGTGTGGGGTGAAGGCCAATGAGGGCACCGTGG...CCCAAGAAACCAAAGTCTGCCGCCCACCTCGCTCCCCTCTGGAATCTTCCCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp AGGGGAGCGAGGTGGGCGGCAGACTTTGGTTTCTTGGGTCCCCTTTCTTGCAGTGTGACCTCGTTCCCCTaGGTGGTGTTGCACCGGGAA +
Preference number: 4 (lower is better)
Translates to: RGARWAADFGFLGPLSCSVTSFP*VVLHRE
Trigger: TTCCCGGTGCAACACCACCCAGGGGAACGAGGTCAC...ACTGCAAGAAAGGGGACCCAAGAAACCAAAGTCTGCCGCCCACCTCGCTCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp GGCGGCAGACTTTGGTTTCTTGGGTCCCCTTTCTTGCAGTTGCAGAGGCTGAGGGCGCTGGGGGTGGCATaGTTCACTCTCGTGGTGGTC +
Preference number: 4 (lower is better)
Translates to: GGRLWFLGSPFLQLQRLRALGVA*FTLVVV
Trigger: GACCACCACGAGAGTGAACCATGCCACCCCCAGCGC...CCTCAGCCTCTGCAACTGCAAGAAAGGGGACCCAAGAAACCAAAGTCTGCCGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp GCGAGGTGGGCGGCAGACTTTGGTTTCTTGGGTCCCCTTTCTTGCAGTTGCAGAGCGCTGGGGGTGGCATaGTTCACTCTCGTGGTGGTC +
Preference number: 4 (lower is better)
Translates to: ARWAADFGFLGPLSCSCRALGVA*FTLVVV
Trigger: GACCACCACGAGAGTGAACCATGCCACCCCCAGCGC...TCTGCAACTGCAAGAAAGGGGACCCAAGAAACCAAAGTCTGCCGCCCACCTCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp GTCTGTACTCTCTGCCTGCCCAAGAGAAATCTACCCTGTTGGCCAAAGGGCAGCAGGCGGCGCTGGGGGTaGCATGGTTCACTCTCGTGG +
Preference number: 4 (lower is better)
Translates to: VCTLCLPKRNLPCWPKGSRRRWG*HGSLSW
Trigger: CCACGAGAGTGAACCATGCCACCCCCAGCGCCGCCT...GCTGCCCTTTGGCCAACAGGGTAGATTTCTCTTGGGCAGGCAGAGAGTACAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp AGAAGTGGGTTTGGCCCTTGGGGAAGATTCCAGAGGGGAGCGAGGTGGGCGGCATTCTTCCGCAGGATCTaGATGGCCACCACCACCATC +
Preference number: 4 (lower is better)
Translates to: RSGFGPWGRFQRGARWAAFFRRI*MATTTI
Trigger: GATGGTGGTGGTGGCCATCCAGATCCTGCGGAAGAA...TGCCGCCCACCTCGCTCCCCTCTGGAATCTTCCCCAAGGGCCAAACCCACTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp GGCTGCCGTGTGGGAAGTTGGCATCTGTCACGGGCTTGTGGGTGCCCGGGCCCTGAGCATAGTCCACCATaGAGACATTCTCTCGTTCAC +
Preference number: 4 (lower is better)
Translates to: GCRVGSWHLSRACGCPGPEHSPP*RHSLVH
Trigger: GTGAACGAGAGAATGTCTCCATGGTGGACTATGCTC...AGGGCCCGGGCACCCACAAGCCCGTGACAGATGCCAACTTCCCACACGGCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374830.2
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp GCTGCCGTGTGGGAAGTTGGCATCTGTCACGGGCTTGTGGGTGCCCGGGCCCTGGAGCATAGTCCACCATaGAGACATTCTCTCGTTCAC +
Preference number: 4 (lower is better)
Translates to: AAVWEVGICHGLVGARALEHSPP*RHSLVH
Trigger: GTGAACGAGAGAATGTCTCCATGGTGGACTATGCTC...CAGGGCCCGGGCACCCACAAGCCCGTGACAGATGCCAACTTCCCACACGGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374830.2
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp GGCTGGAGGCCAGAAGTGGGTTTGGCCCTTGGGGAAGATTCCAGAGGGGAGCGATGCCGTGTGGGAAGTTaGCATCTGTCACGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: GWRPEVGLALGEDSRGERCRVGS*HLSRAC
Trigger: ACAAGCCCGTGACAGATGCCAACTTCCCACACGGCA...TCGCTCCCCTCTGGAATCTTCCCCAAGGGCCAAACCCACTTCTGGCCTCCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp GTTTGGCCCTTGGGGAAGATTCCAGAGGGGAGCGAGGTGGGCGGCAGACTTTGGGGCCAGAAGTGGGTTTaGCCCTTGGGGAAGATTCCA +
Preference number: 4 (lower is better)
Translates to: VWPLGKIPEGSEVGGRLWGQKWV*PLGKIP
Trigger: TGGAATCTTCCCCAAGGGCCAAACCCACTTCTGGCC...CCAAAGTCTGCCGCCCACCTCGCTCCCCTCTGGAATCTTCCCCAAGGGCCAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp GGCAGACTTTGGTTTCTTGGGTCCCCTTTCTTGCAGTTGCAGAGGCTGAGGAGGCTCTGCGCAGAGCACTaGCGAGGGTCCGTCCAGGCA +
Preference number: 4 (lower is better)
Translates to: GRLWFLGSPFLQLQRLRRLCAEH*RGSVQA
Trigger: TGCCTGGACGGACCCTCGCCAGTGCTCTGCGCAGAG...CCTCCTCAGCCTCTGCAACTGCAAGAAAGGGGACCCAAGAAACCAAAGTCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539907.5
ENST00000540617.5
CDS-3UTR TCA 90 bp GATCCAGAATGTTCCACGGAGGCTTCAGGGCCTCTGGGTCTGGAGAAATACGTTGGTGGAGCTGACCCTTaGGGATGCGGGCAGCCGTCA +
Preference number: 4 (lower is better)
Translates to: DPECSTEASGPLGLEKYVGGADP*GCGQPS
Trigger: TGACGGCTGCCCGCATCCTCAAGGGTCAGCTCCACC...AACGTATTTCTCCAGACCCAGAGGCCCTGAAGCCTCCGTGGAACATTCTGGATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000540617.5
CDS-3UTR TCA 90 bp GGCGGCAGACTTTGGTTTCTTGGGTCCCCTTTCTTGCAGTTGCAGAGGCTGAGGGGGCATCTCGTTGTCTaGGTACCAGTCCCGGTCAGC +
Preference number: 4 (lower is better)
Translates to: GGRLWFLGSPFLQLQRLRGHLVV*VPVPVS
Trigger: GCTGACCGGGACTGGTACTCAGACAACGAGATGCCC...CCTCAGCCTCTGCAACTGCAAGAAAGGGGACCCAAGAAACCAAAGTCTGCCGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR TCA 90 bp CGAGGTGGGCGGCAGACTTTGGTTTCTTGGGTCCCCTTTCTTGCAGTTGCAGAGGGGCATCTCGTTGTCTaGGTACCAGTCCCGGTCAGC +
Preference number: 4 (lower is better)
Translates to: RGGRQTLVSWVPFLAVAEGHLVV*VPVPVS
Trigger: GCTGACCGGGACTGGTACTCAGACAACGAGATGCCC...CTCTGCAACTGCAAGAAAGGGGACCCAAGAAACCAAAGTCTGCCGCCCACCTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR TCA 90 bp TGGGTCCCCTTTCTTGCAGTTGCAGAGGCTGAGGAGGCCCCCACCTCCCTGCCCGCTTGTATCTCGGTTTaGAGCTCTTCCAGGTGTCAA +
Preference number: 4 (lower is better)
Translates to: WVPFLAVAEAEEAPTSLPACISV*SSSRCQ
Trigger: TTGACACCTGGAAGAGCTTCAAACCGAGATACAAGC...GGGCAGGGAGGTGGGGGCCTCCTCAGCCTCTGCAACTGCAAGAAAGGGGACCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR TCA 90 bp GGAGCGAGGTGGGCGGCAGACTTTGGTTTCTTGGGTCCCCTTTCTTGCAGTTGCCACCATCTCGGAGAGTaGCGGGTCCGTCACGTTGTT +
Preference number: 4 (lower is better)
Translates to: GARWAADFGFLGPLSCSCHHLGE*RVRHVV
Trigger: AACAACGTGACGGACCCGTCACTCTCCGAGATGGTG...GCAACTGCAAGAAAGGGGACCCAAGAAACCAAAGTCTGCCGCCCACCTCGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR TCA 90 bp GGAGGGTCAGATCCAGAATGTTCCACGGAGGCTTCAGGGCCTCTGGGTCTGGAGCTGGTGGTCTTGGAGTaGGTGAGTGAGCAAGGCCTT +
Preference number: 4 (lower is better)
Translates to: GGSDPECSTEASGPLGLELVVLE*VSEQGL
Trigger: AAGGCCTTGCTCACTCACTCACTCCAAGACCACCAG...CTCCAGACCCAGAGGCCCTGAAGCCTCCGTGGAACATTCTGGATCTGACCCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374840.8
ENST00000539907.5
CDS-3UTR GCA 90 bp TACTCTCTGCCTGCCCAAGAGAAATCTACCCTGTTGGCCAAAGGGCAGCGGGGACCTGGAGCCCAGAGATaGAATCGACGTGGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: YSLPAQEKSTLLAKGQRGPGAQR*NRRGWE
Trigger: CTCCCACCCACGTCGATTGCATCTCTGGGCTCCAGG...TCCCCGCTGCCCTTTGGCCAACAGGGTAGATTTCTCTTGGGCAGGCAGAGAGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374832.5
ENST00000374840.8
CDS-3UTR GCA 90 bp TCAGATCCAGAATGTTCCACGGAGGCTTCAGGGCCTCTGGGTCTGGAGAAATACGGAACGCTCAGTGGCTaGGCTTACCCCCACGGTGCC +
Preference number: 4 (lower is better)
Translates to: SDPECSTEASGPLGLEKYGTLSG*AYPHGA
Trigger: GGCACCGTGGGGGTAAGCGCAGCCACTGAGCGTTCC...GTATTTCTCCAGACCCAGAGGCCCTGAAGCCTCCGTGGAACATTCTGGATCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR GCA 90 bp TTCCACGGAGGCTTCAGGGCCTCTGGGTCTGGAGAAATACGTTCGCTAGAAAAATGCTCGTGGACGCCGTaGAGCAGGTGCGCCATGGGG +
Preference number: 4 (lower is better)
Translates to: FHGGFRASGSGEIRSLEKCSWTP*SRCAMG
Trigger: CCCCATGGCGCACCTGCTGCACGGCGTCCACGAGCA...TTTTTCTAGCGAACGTATTTCTCCAGACCCAGAGGCCCTGAAGCCTCCGTGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR GCA 90 bp GATCCAGAATGTTCCACGGAGGCTTCAGGGCCTCTGGGTCTGGAGAAATACGTTGGCCCCGATGCAGGCTaGATACGCCATCACGTGGGG +
Preference number: 4 (lower is better)
Translates to: DPECSTEASGPLGLEKYVGPDAG*IRHHVG
Trigger: CCCCACGTGATGGCGTATGCAGCCTGCATCGGGGCC...AACGTATTTCTCCAGACCCAGAGGCCCTGAAGCCTCCGTGGAACATTCTGGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR GCA 90 bp CCAGAATGTTCCACGGAGGCTTCAGGGCCTCTGGGTCTGGAGAAATACGTTCGCCGAGGTTGGCCCCGATaGAGGCTGCATACGCCATCA +
Preference number: 4 (lower is better)
Translates to: PECSTEASGPLGLEKYVRRGWPR*RLHTPS
Trigger: TGATGGCGTATGCAGCCTGCATCGGGGCCAACCTCG...GCGAACGTATTTCTCCAGACCCAGAGGCCCTGAAGCCTCCGTGGAACATTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR GCA 90 bp GTCTGTACTCTCTGCCTGCCCAAGAGAAATCTACCCTGTTGGCCAAAGGGCAGCTGCAGCAAGGCTGCCTaGCGAGCTGGCAGGAGCACA +
Preference number: 4 (lower is better)
Translates to: VCTLCLPKRNLPCWPKGSCSKAA*RAGRST
Trigger: TGTGCTCCTGCCAGCTCGGCAGGCAGCCTTGCTGCA...GCTGCCCTTTGGCCAACAGGGTAGATTTCTCTTGGGCAGGCAGAGAGTACAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR GCA 90 bp GGCAGACTTTGGTTTCTTGGGTCCCCTTTCTTGCAGTTGCAGAGGCTGAGGAGGTGCAGCAAGGCTGCCTaGCGAGCTGGCAGGAGCACA +
Preference number: 4 (lower is better)
Translates to: GRLWFLGSPFLQLQRLRRCSKAA*RAGRST
Trigger: TGTGCTCCTGCCAGCTCGGCAGGCAGCCTTGCTGCA...CCTCCTCAGCCTCTGCAACTGCAAGAAAGGGGACCCAAGAAACCAAAGTCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR GCA 90 bp CAGATCCAGAATGTTCCACGGAGGCTTCAGGGCCTCTGGGTCTGGAGAAATACGTGCAGCAAGGCTGCCTaGCGAGCTGGCAGGAGCACA +
Preference number: 4 (lower is better)
Translates to: QIQNVPRRLQGLWVWRNTCSKAA*RAGRST
Trigger: TGTGCTCCTGCCAGCTCGGCAGGCAGCCTTGCTGCA...CGTATTTCTCCAGACCCAGAGGCCCTGAAGCCTCCGTGGAACATTCTGGATCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp TTGGCCCTTGGGGAAGATTCCAGAGGGGAGCGAGGTGGGCGGCAGACTTTGGTTAGTGTCTCTTGCGCTTaGTCTCGCCAGTACTTGGGG +
Preference number: 4 (lower is better)
Translates to: LALGEDSRGERGGRQTLVSVSCA*SRQYLG
Trigger: CCCCAAGTACTGGCGAGACCAAGCGCAAGAGACACT...AACCAAAGTCTGCCGCCCACCTCGCTCCCCTCTGGAATCTTCCCCAAGGGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp GGCGGCAGACTTTGGTTTCTTGGGTCCCCTTTCTTGCAGTTGCAGAGGCTGAGGGGGCAGCCGTCACTGTaGAGACACCCATCCCATCTC +
Preference number: 4 (lower is better)
Translates to: GGRLWFLGSPFLQLQRLRGQPSL*RHPSHL
Trigger: GAGATGGGATGGGTGTCTCCACAGTGACGGCTGCCC...CCTCAGCCTCTGCAACTGCAAGAAAGGGGACCCAAGAAACCAAAGTCTGCCGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000540617.5
CDS-3UTR CCA 90 bp TTGGCCCTTGGGGAAGATTCCAGAGGGGAGCGAGGTGGGCGGCAGACTTTGGTTTGGTGTTGTACGTCTTaGAGAGGGCCACGAAGGGGA +
Preference number: 4 (lower is better)
Translates to: LALGEDSRGERGGRQTLVWCCTS*RGPRRG
Trigger: TCCCCTTCGTGGCCCTCTCCAAGACGTACAACACCA...AACCAAAGTCTGCCGCCCACCTCGCTCCCCTCTGGAATCTTCCCCAAGGGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000540617.5
CDS-3UTR CCA 90 bp GTTTGGCCCTTGGGGAAGATTCCAGAGGGGAGCGAGGTGGGCGGCAGACTTTGGCAGGGACCTGGGCATTaGTGTTGTACGTCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: VWPLGKIPEGSEVGGRLWQGPGH*CCTSWR
Trigger: TCTCCAAGACGTACAACACCAATGCCCAGGTCCCTG...CCAAAGTCTGCCGCCCACCTCGCTCCCCTCTGGAATCTTCCCCAAGGGCCAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000540617.5
CDS-3UTR CCA 90 bp AGAAGTGGGTTTGGCCCTTGGGGAAGATTCCAGAGGGGAGCGAGGTGGGCGGCACAGGGACCTGGGCATTaGTGTTGTACGTCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: RSGFGPWGRFQRGARWAAQGPGH*CCTSWR
Trigger: TCTCCAAGACGTACAACACCAATGCCCAGGTCCCTG...TGCCGCCCACCTCGCTCCCCTCTGGAATCTTCCCCAAGGGCCAAACCCACTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000540617.5
CDS-3UTR CCA 90 bp AAACAGGAGAGTCGCTTCAGAGAGGAGCTGGCGTGTGTGTTCAGAGCCCAGGAGATTTCCCAGCGTCCTTaGCCCAGCGCAGGATGGAGG +
Preference number: 4 (lower is better)
Translates to: KQESRFREELACVFRAQEISQRP*PSAGWR
Trigger: CCTCCATCCTGCGCTGGGCCAAGGACGCTGGGAAAT...CTCCTGGGCTCTGAACACACACGCCAGCTCCTCTCTGAAGCGACTCTCCTGTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374840.8
ENST00000539907.5
CDS-3UTR CCA 90 bp GTGGGTTTGGCCCTTGGGGAAGATTCCAGAGGGGAGCGAGGTGGGCGGCAGACTCGGTTCCAGATGAAGTaGGAGTGCTTGTATCTCGGT +
Preference number: 4 (lower is better)
Translates to: VGLALGEDSRGERGGRQTRFQMK*ECLYLG
Trigger: ACCGAGATACAAGCACTCCCACTTCATCTGGAACCG...AGTCTGCCGCCCACCTCGCTCCCCTCTGGAATCTTCCCCAAGGGCCAAACCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp TGCCTGCCCAAGAGAAATCTACCCTGTTGGCCAAAGGGCAGCGGGGAGGGAGCATTCTTCCGCAGGATCTaGATGGCCACCACCACCATC +
Preference number: 4 (lower is better)
Translates to: CLPKRNLPCWPKGSGEGAFFRRI*MATTTI
Trigger: GATGGTGGTGGTGGCCATCCAGATCCTGCGGAAGAA...TGCTCCCTCCCCGCTGCCCTTTGGCCAACAGGGTAGATTTCTCTTGGGCAGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp GAGGGGAGCGAGGTGGGCGGCAGACTTTGGTTTCTTGGGTCCCCTTTCTTGCAGCCTTCATGGTGCCCGTaGTCAATTCTGCCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: EGSEVGGRLWFLGSPFLQPSWCP*SILPPS
Trigger: GGAAGGAGGCAGAATTGACCACGGGCACCATGAAGG...CTGCAAGAAAGGGGACCCAAGAAACCAAAGTCTGCCGCCCACCTCGCTCCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp TTGGCCCTTGGGGAAGATTCCAGAGGGGAGCGAGGTGGGCGGCAGACTTTGGTTCCTTCATGGTGCCCGTaGTCAATTCTGCCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: LALGEDSRGERGGRQTLVPSWCP*SILPPS
Trigger: GGAAGGAGGCAGAATTGACCACGGGCACCATGAAGG...AACCAAAGTCTGCCGCCCACCTCGCTCCCCTCTGGAATCTTCCCCAAGGGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp GGAGGGTCAGATCCAGAATGTTCCACGGAGGCTTCAGGGCCTCTGGGTCTGGAGAGTGGGTTTGGCCCTTaGGGAAGATTCCAGAGGGGA +
Preference number: 4 (lower is better)
Translates to: GGSDPECSTEASGPLGLESGFGP*GRFQRG
Trigger: TCCCCTCTGGAATCTTCCCCAAGGGCCAAACCCACT...CTCCAGACCCAGAGGCCCTGAAGCCTCCGTGGAACATTCTGGATCTGACCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp TGCCTGCCCAAGAGAAATCTACCCTGTTGGCCAAAGGGCAGCGGGGAGGGAGCAGGCCAGAAGTGGGTTTaGCCCTTGGGGAAGATTCCA +
Preference number: 4 (lower is better)
Translates to: CLPKRNLPCWPKGSGEGAGQKWV*PLGKIP
Trigger: TGGAATCTTCCCCAAGGGCCAAACCCACTTCTGGCC...TGCTCCCTCCCCGCTGCCCTTTGGCCAACAGGGTAGATTTCTCTTGGGCAGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp TACTCTCTGCCTGCCCAAGAGAAATCTACCCTGTTGGCCAAAGGGCAGCGGGGAGCTGGAGGCCAGAAGTaGGTTTGGCCCTTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: YSLPAQEKSTLLAKGQRGAGGQK*VWPLGK
Trigger: CTTCCCCAAGGGCCAAACCCACTTCTGGCCTCCAGC...TCCCCGCTGCCCTTTGGCCAACAGGGTAGATTTCTCTTGGGCAGGCAGAGAGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp AGTGAGCAAGGCCTTGTCCTGAGGAGAAAGACCTCAACTCCCCTGAAGGAGGGCGCTGGAGGCCAGAAGTaGGTTTGGCCCTTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: SEQGLVLRRKTSTPLKEGAGGQK*VWPLGK
Trigger: CTTCCCCAAGGGCCAAACCCACTTCTGGCCTCCAGC...GCCCTCCTTCAGGGGAGTTGAGGTCTTTCTCCTCAGGACAAGGCCTTGCTCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp GGAGCGAGGTGGGCGGCAGACTTTGGTTTCTTGGGTCCCCTTTCTTGCAGTTGCGGAGGGAGCAAAGGCTaGAGGCCAGAAGTGGGTTTG +
Preference number: 4 (lower is better)
Translates to: GARWAADFGFLGPLSCSCGGSKG*RPEVGL
Trigger: CAAACCCACTTCTGGCCTCCAGCCTTTGCTCCCTCC...GCAACTGCAAGAAAGGGGACCCAAGAAACCAAAGTCTGCCGCCCACCTCGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp TTGGGGAAGATTCCAGAGGGGAGCGAGGTGGGCGGCAGACTTTGGTTTCTTGGGGGAGGGAGCAAAGGCTaGAGGCCAGAAGTGGGTTTG +
Preference number: 4 (lower is better)
Translates to: LGKIPEGSEVGGRLWFLGGGSKG*RPEVGL
Trigger: CAAACCCACTTCTGGCCTCCAGCCTTTGCTCCCTCC...CCCAAGAAACCAAAGTCTGCCGCCCACCTCGCTCCCCTCTGGAATCTTCCCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp TGCCTGCCCAAGAGAAATCTACCCTGTTGGCCAAAGGGCAGCGGGGAGGGAGCAAGAAATCTACCCTGTTaGCCAAAGGGCAGCGGGGAG +
Preference number: 4 (lower is better)
Translates to: CLPKRNLPCWPKGSGEGARNLPC*PKGSGE
Trigger: CTCCCCGCTGCCCTTTGGCCAACAGGGTAGATTTCT...TGCTCCCTCCCCGCTGCCCTTTGGCCAACAGGGTAGATTTCTCTTGGGCAGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp GGAGCGAGGTGGGCGGCAGACTTTGGTTTCTTGGGTCCCCTTTCTTGCAGTTGCGAGCATTGTAGGGCCTaGGGGGTTCCAGAGGTAAGG +
Preference number: 4 (lower is better)
Translates to: GARWAADFGFLGPLSCSCEHCRA*GVPEVR
Trigger: CCTTACCTCTGGAACCCCCCAGGCCCTACAATGCTC...GCAACTGCAAGAAAGGGGACCCAAGAAACCAAAGTCTGCCGCCCACCTCGCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR TCA 90 bp GGCTGGAGGCCAGAAGTGGGTTTGGCCCTTGGGGAAGATTCCAGAGGGGAGCGATGTATCCACCAAATGTaGAGACGTGGGAATGGTCCG +
Preference number: 4 (lower is better)
Translates to: GWRPEVGLALGEDSRGERCIHQM*RRGNGP
Trigger: CGGACCATTCCCACGTCTTCACATTTGGTGGATACA...TCGCTCCCCTCTGGAATCTTCCCCAAGGGCCAAACCCACTTCTGGCCTCCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR TCA 90 bp GCAAGGCCTTGTCCTGAGGAGAAAGACCTCAACTCCCCTGAAGGAGGGCTGGGCAGCAAGGCCTTGTCCTaGGGAGAAAGACCTCAACTC +
Preference number: 4 (lower is better)
Translates to: ARPCPEEKDLNSPEGGLGSKALS*GERPQL
Trigger: GAGTTGAGGTCTTTCTCCTCAGGACAAGGCCTTGCT...GCCCAGCCCTCCTTCAGGGGAGTTGAGGTCTTTCTCCTCAGGACAAGGCCTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR TCA 90 bp GCCCAAGAGAAATCTACCCTGTTGGCCAAAGGGCAGCGGGGAGGGAGCAAAGGCAGCAAGGCCTTGTCCTaGGGAGAAAGACCTCAACTC +
Preference number: 4 (lower is better)
Translates to: AQEKSTLLAKGQRGGSKGSKALS*GERPQL
Trigger: GAGTTGAGGTCTTTCTCCTCAGGACAAGGCCTTGCT...GCCTTTGCTCCCTCCCCGCTGCCCTTTGGCCAACAGGGTAGATTTCTCTTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR GCA 90 bp GCCCAAGAGAAATCTACCCTGTTGGCCAAAGGGCAGCGGGGAGGGAGCAAAGGCTCGTGGTGGTCACAATaGCCACAGATTTCCCAGCGT +
Preference number: 4 (lower is better)
Translates to: AQEKSTLLAKGQRGGSKGSWWSQ*PQISQR
Trigger: ACGCTGGGAAATCTGTGGGCATTGTGACCACCACGA...GCCTTTGCTCCCTCCCCGCTGCCCTTTGGCCAACAGGGTAGATTTCTCTTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR GCA 90 bp TGCCCAAGAGAAATCTACCCTGTTGGCCAAAGGGCAGCGGGGAGGGAGCAAAGGATCTCCACCGCCTCATaGAGGGCCTGCTTGGCTTTT +
Preference number: 4 (lower is better)
Translates to: CPREIYPVGQRAAGREQRISTAS*RACLAF
Trigger: AAAAGCCAAGCAGGCCCTGCATGAGGCGGTGGAGAT...CCTTTGCTCCCTCCCCGCTGCCCTTTGGCCAACAGGGTAGATTTCTCTTGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR GCA 90 bp GGCAGACTTTGGTTTCTTGGGTCCCCTTTCTTGCAGTTGCAGAGGCTGAGGAGGCGAGGTTGGCCCCGATaGAGGCTGCATACGCCATCA +
Preference number: 4 (lower is better)
Translates to: GRLWFLGSPFLQLQRLRRRGWPR*RLHTPS
Trigger: TGATGGCGTATGCAGCCTGCATCGGGGCCAACCTCG...CCTCCTCAGCCTCTGCAACTGCAAGAAAGGGGACCCAAGAAACCAAAGTCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp GGAGCGAGGTGGGCGGCAGACTTTGGTTTCTTGGGTCCCCTTTCTTGCAGTTGCAGTGTCTCTTGCGCTTaGTCTCGCCAGTACTTGGGG +
Preference number: 4 (lower is better)
Translates to: GARWAADFGFLGPLSCSCSVSCA*SRQYLG
Trigger: CCCCAAGTACTGGCGAGACCAAGCGCAAGAGACACT...GCAACTGCAAGAAAGGGGACCCAAGAAACCAAAGTCTGCCGCCCACCTCGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp TTGGCCCTTGGGGAAGATTCCAGAGGGGAGCGAGGTGGGCGGCAGACTTTGGTTCAGGGACCTGGGCATTaGTGTTGTACGTCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: LALGEDSRGERGGRQTLVQGPGH*CCTSWR
Trigger: TCTCCAAGACGTACAACACCAATGCCCAGGTCCCTG...AACCAAAGTCTGCCGCCCACCTCGCTCCCCTCTGGAATCTTCCCCAAGGGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000540617.5
CDS-3UTR CCA 90 bp TTCCACGGAGGCTTCAGGGCCTCTGGGTCTGGAGAAATACGTTCGCTAGAAAAACACACAGGTAGGCGGTaGCGGTGCCGGCACTGTCAG +
Preference number: 4 (lower is better)
Translates to: FHGGFRASGSGEIRSLEKHTGRR*RCRHCQ
Trigger: CTGACAGTGCCGGCACCGCCACCGCCTACCTGTGTG...TTTTTCTAGCGAACGTATTTCTCCAGACCCAGAGGCCCTGAAGCCTCCGTGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp CCACGGAGGCTTCAGGGCCTCTGGGTCTGGAGAAATACGTTCGCTAGAAAAATAACCGGGAACGCTCAGTaGCTGCGCTTACCCCCACGG +
Preference number: 4 (lower is better)
Translates to: PRRLQGLWVWRNTFARKITGNAQ*LRLPPR
Trigger: CCGTGGGGGTAAGCGCAGCCACTGAGCGTTCCCGGT...TATTTTTCTAGCGAACGTATTTCTCCAGACCCAGAGGCCCTGAAGCCTCCGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp TTCCACGGAGGCTTCAGGGCCTCTGGGTCTGGAGAAATACGTTCGCTAGAAAAAACCGGGAACGCTCAGTaGCTGCGCTTACCCCCACGG +
Preference number: 4 (lower is better)
Translates to: FHGGFRASGSGEIRSLEKTGNAQ*LRLPPR
Trigger: CCGTGGGGGTAAGCGCAGCCACTGAGCGTTCCCGGT...TTTTTCTAGCGAACGTATTTCTCCAGACCCAGAGGCCCTGAAGCCTCCGTGGAA
58% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp GTTTGGCCCTTGGGGAAGATTCCAGAGGGGAGCGAGGTGGGCGGCAGACTTTGGGGTTCACTCTCGTGGTaGTCACAATGCCCACAGATT +
Preference number: 4 (lower is better)
Translates to: VWPLGKIPEGSEVGGRLWGSLSW*SQCPQI
Trigger: AATCTGTGGGCATTGTGACCACCACGAGAGTGAACC...CCAAAGTCTGCCGCCCACCTCGCTCCCCTCTGGAATCTTCCCCAAGGGCCAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp TGTACTCTCTGCCTGCCCAAGAGAAATCTACCCTGTTGGCCAAAGGGCAGCGGGCCAGCCTCGTGCCCCTaGCTTTCTCGTCACTCTCAT +
Preference number: 4 (lower is better)
Translates to: CTLCLPKRNLPCWPKGSGPASCP*LSRHSH
Trigger: ATGAGAGTGACGAGAAAGCCAGGGGCACGAGGCTGG...CCCGCTGCCCTTTGGCCAACAGGGTAGATTTCTCTTGGGCAGGCAGAGAGTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp GGCGGCAGACTTTGGTTTCTTGGGTCCCCTTTCTTGCAGTTGCAGAGGCTGAGGCCAGCCTCGTGCCCCTaGCTTTCTCGTCACTCTCAT +
Preference number: 4 (lower is better)
Translates to: GGRLWFLGSPFLQLQRLRPASCP*LSRHSH
Trigger: ATGAGAGTGACGAGAAAGCCAGGGGCACGAGGCTGG...CCTCAGCCTCTGCAACTGCAAGAAAGGGGACCCAAGAAACCAAAGTCTGCCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp CGAGGTGGGCGGCAGACTTTGGTTTCTTGGGTCCCCTTTCTTGCAGTTGCAGAGCCAGCCTCGTGCCCCTaGCTTTCTCGTCACTCTCAT +
Preference number: 4 (lower is better)
Translates to: RGGRQTLVSWVPFLAVAEPASCP*LSRHSH
Trigger: ATGAGAGTGACGAGAAAGCCAGGGGCACGAGGCTGG...CTCTGCAACTGCAAGAAAGGGGACCCAAGAAACCAAAGTCTGCCGCCCACCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp GAGGGGAGCGAGGTGGGCGGCAGACTTTGGTTTCTTGGGTCCCCTTTCTTGCAGCCAAATGTGAAGACGTaGGAATGGTCCGCAGTGACC +
Preference number: 4 (lower is better)
Translates to: EGSEVGGRLWFLGSPFLQPNVKT*EWSAVT
Trigger: GGTCACTGCGGACCATTCCCACGTCTTCACATTTGG...CTGCAAGAAAGGGGACCCAAGAAACCAAAGTCTGCCGCCCACCTCGCTCCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp GTGGGTTTGGCCCTTGGGGAAGATTCCAGAGGGGAGCGAGGTGGGCGGCAGACTGAGCATAGTCCACCATaGAGACATTCTCTCGTTCAC +
Preference number: 4 (lower is better)
Translates to: VGLALGEDSRGERGGRQTEHSPP*RHSLVH
Trigger: GTGAACGAGAGAATGTCTCCATGGTGGACTATGCTC...AGTCTGCCGCCCACCTCGCTCCCCTCTGGAATCTTCCCCAAGGGCCAAACCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp CCACGGAGGCTTCAGGGCCTCTGGGTCTGGAGAAATACGTTCGCTAGAAAAATACTGGCAGGAGCACAGTaGCCGAGGTTGGCCCCGATG +
Preference number: 4 (lower is better)
Translates to: PRRLQGLWVWRNTFARKILAGAQ*PRLAPM
Trigger: CATCGGGGCCAACCTCGGCCACTGTGCTCCTGCCAG...TATTTTTCTAGCGAACGTATTTCTCCAGACCCAGAGGCCCTGAAGCCTCCGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp TTGGGGAAGATTCCAGAGGGGAGCGAGGTGGGCGGCAGACTTTGGTTTCTTGGGAGTGGGTTTGGCCCTTaGGGAAGATTCCAGAGGGGA +
Preference number: 4 (lower is better)
Translates to: LGKIPEGSEVGGRLWFLGSGFGP*GRFQRG
Trigger: TCCCCTCTGGAATCTTCCCCAAGGGCCAAACCCACT...CCCAAGAAACCAAAGTCTGCCGCCCACCTCGCTCCCCTCTGGAATCTTCCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp CAGATCCAGAATGTTCCACGGAGGCTTCAGGGCCTCTGGGTCTGGAGAAATACGGCTGGAGGCCAGAAGTaGGTTTGGCCCTTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: QIQNVPRRLQGLWVWRNTAGGQK*VWPLGK
Trigger: CTTCCCCAAGGGCCAAACCCACTTCTGGCCTCCAGC...CGTATTTCTCCAGACCCAGAGGCCCTGAAGCCTCCGTGGAACATTCTGGATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp TACTCTCTGCCTGCCCAAGAGAAATCTACCCTGTTGGCCAAAGGGCAGCGGGGAGGAGGGAGCAAAGGCTaGAGGCCAGAAGTGGGTTTG +
Preference number: 4 (lower is better)
Translates to: YSLPAQEKSTLLAKGQRGGGSKG*RPEVGL
Trigger: CAAACCCACTTCTGGCCTCCAGCCTTTGCTCCCTCC...TCCCCGCTGCCCTTTGGCCAACAGGGTAGATTTCTCTTGGGCAGGCAGAGAGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp GGAGGGTCAGATCCAGAATGTTCCACGGAGGCTTCAGGGCCTCTGGGTCTGGAGCAGGGCCTCTGGGTCTaGAGAAATACGTTCGCTAGA +
Preference number: 4 (lower is better)
Translates to: GGSDPECSTEASGPLGLEQGLWV*RNTFAR
Trigger: TCTAGCGAACGTATTTCTCCAGACCCAGAGGCCCTG...CTCCAGACCCAGAGGCCCTGAAGCCTCCGTGGAACATTCTGGATCTGACCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp TTGGCCCTTGGGGAAGATTCCAGAGGGGAGCGAGGTGGGCGGCAGACTTTGGTTAGGCTTCAGGGCCTCTaGGTCTGGAGAAATACGTTC +
Preference number: 4 (lower is better)
Translates to: LALGEDSRGERGGRQTLVRLQGL*VWRNTF
Trigger: GAACGTATTTCTCCAGACCCAGAGGCCCTGAAGCCT...AACCAAAGTCTGCCGCCCACCTCGCTCCCCTCTGGAATCTTCCCCAAGGGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp TGTACTCTCTGCCTGCCCAAGAGAAATCTACCCTGTTGGCCAAAGGGCAGCGGGGAGCATTGTAGGGCCTaGGGGGTTCCAGAGGTAAGG +
Preference number: 4 (lower is better)
Translates to: CTLCLPKRNLPCWPKGSGEHCRA*GVPEVR
Trigger: CCTTACCTCTGGAACCCCCCAGGCCCTACAATGCTC...CCCGCTGCCCTTTGGCCAACAGGGTAGATTTCTCTTGGGCAGGCAGAGAGTACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp CCACGGAGGCTTCAGGGCCTCTGGGTCTGGAGAAATACGTTCGCTAGAAAAATATGGCTCTTCCCGGCCTaGGCCACGCTGGGTAGGATG +
Preference number: 4 (lower is better)
Translates to: PRRLQGLWVWRNTFARKIWLFPA*ATLGRM
Trigger: CATCCTACCCAGCGTGGCCCAGGCCGGGAAGAGCCA...TATTTTTCTAGCGAACGTATTTCTCCAGACCCAGAGGCCCTGAAGCCTCCGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374840.8
ENST00000539907.5
CDS-3UTR CCA 90 bp GGCGGCAGACTTTGGTTTCTTGGGTCCCCTTTCTTGCAGTTGCAGAGGCTGAGGGCTTCAGAGAGGAGCTaGCGTGTGTGTTCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: GGRLWFLGSPFLQLQRLRASERS*RVCSEP
Trigger: GGGCTCTGAACACACACGCCAGCTCCTCTCTGAAGC...CCTCAGCCTCTGCAACTGCAAGAAAGGGGACCCAAGAAACCAAAGTCTGCCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374840.8
ENST00000539907.5
CDS-3UTR CCA 90 bp TACTCTCTGCCTGCCCAAGAGAAATCTACCCTGTTGGCCAAAGGGCAGCGGGGAGCTTCAGAGAGGAGCTaGCGTGTGTGTTCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: YSLPAQEKSTLLAKGQRGASERS*RVCSEP
Trigger: GGGCTCTGAACACACACGCCAGCTCCTCTCTGAAGC...TCCCCGCTGCCCTTTGGCCAACAGGGTAGATTTCTCTTGGGCAGGCAGAGAGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374840.8
ENST00000539907.5
CDS-3UTR TCA 90 bp CCAGAATGTTCCACGGAGGCTTCAGGGCCTCTGGGTCTGGAGAAATACGTTCGCCCGTGCGGTTCCAGATaGAGTGGGAGTGCTTGTATC +
Preference number: 4 (lower is better)
Translates to: PECSTEASGPLGLEKYVRPCGSR*SGSACI
Trigger: GATACAAGCACTCCCACTTCATCTGGAACCGCACGG...GCGAACGTATTTCTCCAGACCCAGAGGCCCTGAAGCCTCCGTGGAACATTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR TCA 90 bp GCAAGGCCTTGTCCTGAGGAGAAAGACCTCAACTCCCCTGAAGGAGGGCTGGGCTGTATCCACCAAATGTaGAGACGTGGGAATGGTCCG +
Preference number: 4 (lower is better)
Translates to: ARPCPEEKDLNSPEGGLGCIHQM*RRGNGP
Trigger: CGGACCATTCCCACGTCTTCACATTTGGTGGATACA...GCCCAGCCCTCCTTCAGGGGAGTTGAGGTCTTTCTCCTCAGGACAAGGCCTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR TCA 90 bp GAGGGGAGCGAGGTGGGCGGCAGACTTTGGTTTCTTGGGTCCCCTTTCTTGCAGCATACAGGATGGCAGTaGAGGGCTTCTTGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: EGSEVGGRLWFLGSPFLQHTGWQ*RASCLC
Trigger: ACACAGACAAGAAGCCCTTCACTGCCATCCTGTATG...CTGCAAGAAAGGGGACCCAAGAAACCAAAGTCTGCCGCCCACCTCGCTCCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR GCA 90 bp TTCCACGGAGGCTTCAGGGCCTCTGGGTCTGGAGAAATACGTTCGCTAGAAAAACGCTTACCCCCACGGTaGCCTCATTGGCCTTCACCC +
Preference number: 4 (lower is better)
Translates to: FHGGFRASGSGEIRSLEKRLPPR*PHWPSP
Trigger: GGGTGAAGGCCAATGAGGGCACCGTGGGGGTAAGCG...TTTTTCTAGCGAACGTATTTCTCCAGACCCAGAGGCCCTGAAGCCTCCGTGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR GCA 90 bp TTGGTTTCTTGGGTCCCCTTTCTTGCAGTTGCAGAGGCTGAGGAGGCCCCCACCTCGTGGTGGTCACAATaGCCACAGATTTCCCAGCGT +
Preference number: 4 (lower is better)
Translates to: LVSWVPFLAVAEAEEAPTSWWSQ*PQISQR
Trigger: ACGCTGGGAAATCTGTGGGCATTGTGACCACCACGA...GGTGGGGGCCTCCTCAGCCTCTGCAACTGCAAGAAAGGGGACCCAAGAAACCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR GCA 90 bp GGCGGCAGACTTTGGTTTCTTGGGTCCCCTTTCTTGCAGTTGCAGAGGCTGAGGGCCCGTGGTCAATTCTaGCTCCTTCCACCAGCAAGA +
Preference number: 4 (lower is better)
Translates to: GGRLWFLGSPFLQLQRLRARGQF*LLPPAR
Trigger: TCTTGCTGGTGGAAGGAGGCAGAATTGACCACGGGC...CCTCAGCCTCTGCAACTGCAAGAAAGGGGACCCAAGAAACCAAAGTCTGCCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR GCA 90 bp GCCCAAGAGAAATCTACCCTGTTGGCCAAAGGGCAGCGGGGAGGGAGCAAAGGCGCTTTTCCTTCATGGTaGCCGTGGTCAATTCTGCCT +
Preference number: 4 (lower is better)
Translates to: AQEKSTLLAKGQRGGSKGAFPSW*PWSILP
Trigger: AGGCAGAATTGACCACGGGCACCATGAAGGAAAAGC...GCCTTTGCTCCCTCCCCGCTGCCCTTTGGCCAACAGGGTAGATTTCTCTTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR GCA 90 bp GGAGGGTCAGATCCAGAATGTTCCACGGAGGCTTCAGGGCCTCTGGGTCTGGAGGCTTTTCCTTCATGGTaGCCGTGGTCAATTCTGCCT +
Preference number: 4 (lower is better)
Translates to: GGSDPECSTEASGPLGLEAFPSW*PWSILP
Trigger: AGGCAGAATTGACCACGGGCACCATGAAGGAAAAGC...CTCCAGACCCAGAGGCCCTGAAGCCTCCGTGGAACATTCTGGATCTGACCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR GCA 90 bp TGTACTCTCTGCCTGCCCAAGAGAAATCTACCCTGTTGGCCAAAGGGCAGCGGGATCTCCACCGCCTCATaGAGGGCCTGCTTGGCTTTT +
Preference number: 4 (lower is better)
Translates to: CTLCLPKRNLPCWPKGSGISTAS*RACLAF
Trigger: AAAAGCCAAGCAGGCCCTGCATGAGGCGGTGGAGAT...CCCGCTGCCCTTTGGCCAACAGGGTAGATTTCTCTTGGGCAGGCAGAGAGTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR GCA 90 bp GGCGGCAGACTTTGGTTTCTTGGGTCCCCTTTCTTGCAGTTGCAGAGGCTGAGGATCTCCACCGCCTCATaGAGGGCCTGCTTGGCTTTT +
Preference number: 4 (lower is better)
Translates to: GGRLWFLGSPFLQLQRLRISTAS*RACLAF
Trigger: AAAAGCCAAGCAGGCCCTGCATGAGGCGGTGGAGAT...CCTCAGCCTCTGCAACTGCAAGAAAGGGGACCCAAGAAACCAAAGTCTGCCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp CGAGGTGGGCGGCAGACTTTGGTTTCTTGGGTCCCCTTTCTTGCAGTTGCAGAGAGTGTCTCTTGCGCTTaGTCTCGCCAGTACTTGGGG +
Preference number: 4 (lower is better)
Translates to: RGGRQTLVSWVPFLAVAESVSCA*SRQYLG
Trigger: CCCCAAGTACTGGCGAGACCAAGCGCAAGAGACACT...CTCTGCAACTGCAAGAAAGGGGACCCAAGAAACCAAAGTCTGCCGCCCACCTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp GCGAGGTGGGCGGCAGACTTTGGTTTCTTGGGTCCCCTTTCTTGCAGTTGCAGAGCACTGTCAGGGACCTaGGCATTGGTGTTGTACGTC +
Preference number: 4 (lower is better)
Translates to: ARWAADFGFLGPLSCSCRALSGT*ALVLYV
Trigger: GACGTACAACACCAATGCCCAGGTCCCTGACAGTGC...TCTGCAACTGCAAGAAAGGGGACCCAAGAAACCAAAGTCTGCCGCCCACCTCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp GATCCAGAATGTTCCACGGAGGCTTCAGGGCCTCTGGGTCTGGAGAAATACGTTCCACGGTGCCCTCATTaGCCTTCACCCCACACAGGT +
Preference number: 4 (lower is better)
Translates to: DPECSTEASGPLGLEKYVPRCPH*PSPHTG
Trigger: ACCTGTGTGGGGTGAAGGCCAATGAGGGCACCGTGG...AACGTATTTCTCCAGACCCAGAGGCCCTGAAGCCTCCGTGGAACATTCTGGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp TTCCACGGAGGCTTCAGGGCCTCTGGGTCTGGAGAAATACGTTCGCTAGAAAAACCTCGTTCCCCTGGGTaGTGTTGCACCGGGAACGCT +
Preference number: 4 (lower is better)
Translates to: FHGGFRASGSGEIRSLEKPRSPG*CCTGNA
Trigger: AGCGTTCCCGGTGCAACACCACCCAGGGGAACGAGG...TTTTTCTAGCGAACGTATTTCTCCAGACCCAGAGGCCCTGAAGCCTCCGTGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp GATCCAGAATGTTCCACGGAGGCTTCAGGGCCTCTGGGTCTGGAGAAATACGTTATTTCCCAGCGTCCTTaGCCCAGCGCAGGATGGAGG +
Preference number: 4 (lower is better)
Translates to: DPECSTEASGPLGLEKYVISQRP*PSAGWR
Trigger: CCTCCATCCTGCGCTGGGCCAAGGACGCTGGGAAAT...AACGTATTTCTCCAGACCCAGAGGCCCTGAAGCCTCCGTGGAACATTCTGGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp TGCCCAAGAGAAATCTACCCTGTTGGCCAAAGGGCAGCGGGGAGGGAGCAAAGGCATGGTTCACTCTCGTaGTGGTCACAATGCCCACAG +
Preference number: 4 (lower is better)
Translates to: CPREIYPVGQRAAGREQRHGSLS*WSQCPQ
Trigger: CTGTGGGCATTGTGACCACCACGAGAGTGAACCATG...CCTTTGCTCCCTCCCCGCTGCCCTTTGGCCAACAGGGTAGATTTCTCTTGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp GCAAGGCCTTGTCCTGAGGAGAAAGACCTCAACTCCCCTGAAGGAGGGCTGGGCCGGTTCCAGATGAAGTaGGAGTGCTTGTATCTCGGT +
Preference number: 4 (lower is better)
Translates to: ARPCPEEKDLNSPEGGLGRFQMK*ECLYLG
Trigger: ACCGAGATACAAGCACTCCCACTTCATCTGGAACCG...GCCCAGCCCTCCTTCAGGGGAGTTGAGGTCTTTCTCCTCAGGACAAGGCCTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp GGCGGCAGACTTTGGTTTCTTGGGTCCCCTTTCTTGCAGTTGCAGAGGCTGAGGCCTTCATGGTGCCCGTaGTCAATTCTGCCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: GGRLWFLGSPFLQLQRLRPSWCP*SILPPS
Trigger: GGAAGGAGGCAGAATTGACCACGGGCACCATGAAGG...CCTCAGCCTCTGCAACTGCAAGAAAGGGGACCCAAGAAACCAAAGTCTGCCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp TCTGTACTCTCTGCCTGCCCAAGAGAAATCTACCCTGTTGGCCAAAGGGCAGCGGTGAAGACGTGGGAATaGTCCGCAGTGACCACGGTC +
Preference number: 4 (lower is better)
Translates to: SVLSACPREIYPVGQRAAVKTWE*SAVTTV
Trigger: GACCGTGGTCACTGCGGACCATTCCCACGTCTTCAC...CGCTGCCCTTTGGCCAACAGGGTAGATTTCTCTTGGGCAGGCAGAGAGTACAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp TTGGGGAAGATTCCAGAGGGGAGCGAGGTGGGCGGCAGACTTTGGTTTCTTGGGCCAAATGTGAAGACGTaGGAATGGTCCGCAGTGACC +
Preference number: 4 (lower is better)
Translates to: LGKIPEGSEVGGRLWFLGPNVKT*EWSAVT
Trigger: GGTCACTGCGGACCATTCCCACGTCTTCACATTTGG...CCCAAGAAACCAAAGTCTGCCGCCCACCTCGCTCCCCTCTGGAATCTTCCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp AAACAGGAGAGTCGCTTCAGAGAGGAGCTGGCGTGTGTGTTCAGAGCCCAGGAGGTGGGCGGCAGACTTTaGTTTCTTGGGTCCCCTTTC +
Preference number: 4 (lower is better)
Translates to: KQESRFREELACVFRAQEVGGRL*FLGSPF
Trigger: GAAAGGGGACCCAAGAAACCAAAGTCTGCCGCCCAC...CTCCTGGGCTCTGAACACACACGCCAGCTCCTCTCTGAAGCGACTCTCCTGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374840.8
ENST00000539907.5
CDS-3UTR CCA 90 bp GCGAGGTGGGCGGCAGACTTTGGTTTCTTGGGTCCCCTTTCTTGCAGTTGCAGAAGTGGGTTTGGCCCTTaGGGAAGATTCCAGAGGGGA +
Preference number: 4 (lower is better)
Translates to: ARWAADFGFLGPLSCSCRSGFGP*GRFQRG
Trigger: TCCCCTCTGGAATCTTCCCCAAGGGCCAAACCCACT...TCTGCAACTGCAAGAAAGGGGACCCAAGAAACCAAAGTCTGCCGCCCACCTCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp CGAGGTGGGCGGCAGACTTTGGTTTCTTGGGTCCCCTTTCTTGCAGTTGCAGAGAGAAATCTACCCTGTTaGCCAAAGGGCAGCGGGGAG +
Preference number: 4 (lower is better)
Translates to: RGGRQTLVSWVPFLAVAERNLPC*PKGSGE
Trigger: CTCCCCGCTGCCCTTTGGCCAACAGGGTAGATTTCT...CTCTGCAACTGCAAGAAAGGGGACCCAAGAAACCAAAGTCTGCCGCCCACCTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp TTGGTTTCTTGGGTCCCCTTTCTTGCAGTTGCAGAGGCTGAGGAGGCCCCCACCCAGGGCCTCTGGGTCTaGAGAAATACGTTCGCTAGA +
Preference number: 4 (lower is better)
Translates to: LVSWVPFLAVAEAEEAPTQGLWV*RNTFAR
Trigger: TCTAGCGAACGTATTTCTCCAGACCCAGAGGCCCTG...GGTGGGGGCCTCCTCAGCCTCTGCAACTGCAAGAAAGGGGACCCAAGAAACCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp CAGATCCAGAATGTTCCACGGAGGCTTCAGGGCCTCTGGGTCTGGAGAAATACGGAGCATTGTAGGGCCTaGGGGGTTCCAGAGGTAAGG +
Preference number: 4 (lower is better)
Translates to: QIQNVPRRLQGLWVWRNTEHCRA*GVPEVR
Trigger: CCTTACCTCTGGAACCCCCCAGGCCCTACAATGCTC...CGTATTTCTCCAGACCCAGAGGCCCTGAAGCCTCCGTGGAACATTCTGGATCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
3UTR CAA 72 bp GAAGATTCCAGAGGGGAGCGAGGTGGGCGGCAGACTTaGGTTTCTTGGGTCCCCTTTCTTGCAGTTGCAGAG +
Preference number: 4 (lower is better)
Translates to: EDSRGERGGRQT*VSWVPFLAVAE
Trigger: CTCTGCAACTGCAAGAAAGGGGACCCAAGAAACCAAAGTCTGCCGCCCACCTCGCTCCCCTCTGGAATCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR TCA 90 bp GAGGGGAGCGAGGTGGGCGGCAGACTTTGGTTTCTTGGGTCCCCTTTCTTGCAGTGGTCAGATGTTAACTaGTGTTCCAATCCTGCGCAG +
Preference number: 4 (lower is better)
Translates to: EGSEVGGRLWFLGSPFLQWSDVN*CSNPAQ
Trigger: CTGCGCAGGATTGGAACATCAGTTAACATCTGACCA...CTGCAAGAAAGGGGACCCAAGAAACCAAAGTCTGCCGCCCACCTCGCTCCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374840.8
CDS-3UTR TCA 90 bp AAGGCTGGAGGCCAGAAGTGGGTTTGGCCCTTGGGGAAGATTCCAGAGGGGAGCTTGGTGTTGAGCTTCTaGAGCTCCAGGGCATATTTC +
Preference number: 4 (lower is better)
Translates to: KAGGQKWVWPLGKIPEGSLVLSF*SSRAYF
Trigger: GAAATATGCCCTGGAGCTTCAGAAGCTCAACACCAA...GCTCCCCTCTGGAATCTTCCCCAAGGGCCAAACCCACTTCTGGCCTCCAGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR TCA 90 bp GCCCAAGAGAAATCTACCCTGTTGGCCAAAGGGCAGCGGGGAGGGAGCAAAGGCGCTTGTATCTCGGTTTaGAGCTCTTCCAGGTGTCAA +
Preference number: 4 (lower is better)
Translates to: AQEKSTLLAKGQRGGSKGACISV*SSSRCQ
Trigger: TTGACACCTGGAAGAGCTTCAAACCGAGATACAAGC...GCCTTTGCTCCCTCCCCGCTGCCCTTTGGCCAACAGGGTAGATTTCTCTTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR TCA 90 bp GAGGGGAGCGAGGTGGGCGGCAGACTTTGGTTTCTTGGGTCCCCTTTCTTGCAGGCTTGTATCTCGGTTTaGAGCTCTTCCAGGTGTCAA +
Preference number: 4 (lower is better)
Translates to: EGSEVGGRLWFLGSPFLQACISV*SSSRCQ
Trigger: TTGACACCTGGAAGAGCTTCAAACCGAGATACAAGC...CTGCAAGAAAGGGGACCCAAGAAACCAAAGTCTGCCGCCCACCTCGCTCCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR GCA 90 bp TTCCACGGAGGCTTCAGGGCCTCTGGGTCTGGAGAAATACGTTCGCTAGAAAAACCTGGAGCCCAGAGATaGAATCGACGTGGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: FHGGFRASGSGEIRSLEKPGAQR*NRRGWE
Trigger: CTCCCACCCACGTCGATTGCATCTCTGGGCTCCAGG...TTTTTCTAGCGAACGTATTTCTCCAGACCCAGAGGCCCTGAAGCCTCCGTGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374832.5
ENST00000374840.8
CDS-3UTR GCA 90 bp AGTGAGCAAGGCCTTGTCCTGAGGAGAAAGACCTCAACTCCCCTGAAGGAGGGCTCGTGGTGGTCACAATaGCCACAGATTTCCCAGCGT +
Preference number: 4 (lower is better)
Translates to: SEQGLVLRRKTSTPLKEGSWWSQ*PQISQR
Trigger: ACGCTGGGAAATCTGTGGGCATTGTGACCACCACGA...GCCCTCCTTCAGGGGAGTTGAGGTCTTTCTCCTCAGGACAAGGCCTTGCTCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR GCA 90 bp AGGGGAGCGAGGTGGGCGGCAGACTTTGGTTTCTTGGGTCCCCTTTCTTGCAGTGCTTTTCCTTCATGGTaGCCGTGGTCAATTCTGCCT +
Preference number: 4 (lower is better)
Translates to: RGARWAADFGFLGPLSCSAFPSW*PWSILP
Trigger: AGGCAGAATTGACCACGGGCACCATGAAGGAAAAGC...ACTGCAAGAAAGGGGACCCAAGAAACCAAAGTCTGCCGCCCACCTCGCTCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR GCA 90 bp CAGATCCAGAATGTTCCACGGAGGCTTCAGGGCCTCTGGGTCTGGAGAAATACGATCTCCACCGCCTCATaGAGGGCCTGCTTGGCTTTT +
Preference number: 4 (lower is better)
Translates to: QIQNVPRRLQGLWVWRNTISTAS*RACLAF
Trigger: AAAAGCCAAGCAGGCCCTGCATGAGGCGGTGGAGAT...CGTATTTCTCCAGACCCAGAGGCCCTGAAGCCTCCGTGGAACATTCTGGATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR GCA 90 bp GCAAGGCCTTGTCCTGAGGAGAAAGACCTCAACTCCCCTGAAGGAGGGCTGGGCTCTGTACTCTCTGCCTaGCCAAGAGAAATCTACCCT +
Preference number: 4 (lower is better)
Translates to: ARPCPEEKDLNSPEGGLGSVLSA*PREIYP
Trigger: AGGGTAGATTTCTCTTGGGCAGGCAGAGAGTACAGA...GCCCAGCCCTCCTTCAGGGGAGTTGAGGTCTTTCTCCTCAGGACAAGGCCTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp CCACGGAGGCTTCAGGGCCTCTGGGTCTGGAGAAATACGTTCGCTAGAAAAATAGGGCAGCCGTCACTGTaGAGACACCCATCCCATCTC +
Preference number: 4 (lower is better)
Translates to: PRRLQGLWVWRNTFARKIGQPSL*RHPSHL
Trigger: GAGATGGGATGGGTGTCTCCACAGTGACGGCTGCCC...TATTTTTCTAGCGAACGTATTTCTCCAGACCCAGAGGCCCTGAAGCCTCCGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000540617.5
CDS-3UTR CCA 90 bp GGCAGACTTTGGTTTCTTGGGTCCCCTTTCTTGCAGTTGCAGAGGCTGAGGAGGTGGTGTTGTACGTCTTaGAGAGGGCCACGAAGGGGA +
Preference number: 4 (lower is better)
Translates to: GRLWFLGSPFLQLQRLRRWCCTS*RGPRRG
Trigger: TCCCCTTCGTGGCCCTCTCCAAGACGTACAACACCA...CCTCCTCAGCCTCTGCAACTGCAAGAAAGGGGACCCAAGAAACCAAAGTCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000540617.5
CDS-3UTR CCA 90 bp GTCTGTACTCTCTGCCTGCCCAAGAGAAATCTACCCTGTTGGCCAAAGGGCAGCTGGTGTTGTACGTCTTaGAGAGGGCCACGAAGGGGA +
Preference number: 4 (lower is better)
Translates to: VCTLCLPKRNLPCWPKGSWCCTS*RGPRRG
Trigger: TCCCCTTCGTGGCCCTCTCCAAGACGTACAACACCA...GCTGCCCTTTGGCCAACAGGGTAGATTTCTCTTGGGCAGGCAGAGAGTACAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000540617.5
CDS-3UTR CCA 90 bp GGCGGCAGACTTTGGTTTCTTGGGTCCCCTTTCTTGCAGTTGCAGAGGCTGAGGCATGGTTCACTCTCGTaGTGGTCACAATGCCCACAG +
Preference number: 4 (lower is better)
Translates to: GGRLWFLGSPFLQLQRLRHGSLS*WSQCPQ
Trigger: CTGTGGGCATTGTGACCACCACGAGAGTGAACCATG...CCTCAGCCTCTGCAACTGCAAGAAAGGGGACCCAAGAAACCAAAGTCTGCCGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp GGCGGCAGACTTTGGTTTCTTGGGTCCCCTTTCTTGCAGTTGCAGAGGCTGAGGCCAAATGTGAAGACGTaGGAATGGTCCGCAGTGACC +
Preference number: 4 (lower is better)
Translates to: GGRLWFLGSPFLQLQRLRPNVKT*EWSAVT
Trigger: GGTCACTGCGGACCATTCCCACGTCTTCACATTTGG...CCTCAGCCTCTGCAACTGCAAGAAAGGGGACCCAAGAAACCAAAGTCTGCCGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp CAGATCCAGAATGTTCCACGGAGGCTTCAGGGCCTCTGGGTCTGGAGAAATACGGTGGGCGGCAGACTTTaGTTTCTTGGGTCCCCTTTC +
Preference number: 4 (lower is better)
Translates to: QIQNVPRRLQGLWVWRNTVGGRL*FLGSPF
Trigger: GAAAGGGGACCCAAGAAACCAAAGTCTGCCGCCCAC...CGTATTTCTCCAGACCCAGAGGCCCTGAAGCCTCCGTGGAACATTCTGGATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp TCTGTACTCTCTGCCTGCCCAAGAGAAATCTACCCTGTTGGCCAAAGGGCAGCGAGTGGGTTTGGCCCTTaGGGAAGATTCCAGAGGGGA +
Preference number: 4 (lower is better)
Translates to: SVLSACPREIYPVGQRAASGFGP*GRFQRG
Trigger: TCCCCTCTGGAATCTTCCCCAAGGGCCAAACCCACT...CGCTGCCCTTTGGCCAACAGGGTAGATTTCTCTTGGGCAGGCAGAGAGTACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp CCACGGAGGCTTCAGGGCCTCTGGGTCTGGAGAAATACGTTCGCTAGAAAAATAGCTGGAGGCCAGAAGTaGGTTTGGCCCTTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: PRRLQGLWVWRNTFARKIAGGQK*VWPLGK
Trigger: CTTCCCCAAGGGCCAAACCCACTTCTGGCCTCCAGC...TATTTTTCTAGCGAACGTATTTCTCCAGACCCAGAGGCCCTGAAGCCTCCGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp GGCAGACTTTGGTTTCTTGGGTCCCCTTTCTTGCAGTTGCAGAGGCTGAGGAGGAGAAATCTACCCTGTTaGCCAAAGGGCAGCGGGGAG +
Preference number: 4 (lower is better)
Translates to: GRLWFLGSPFLQLQRLRRRNLPC*PKGSGE
Trigger: CTCCCCGCTGCCCTTTGGCCAACAGGGTAGATTTCT...CCTCCTCAGCCTCTGCAACTGCAAGAAAGGGGACCCAAGAAACCAAAGTCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp CAGATCCAGAATGTTCCACGGAGGCTTCAGGGCCTCTGGGTCTGGAGAAATACGAGAAATCTACCCTGTTaGCCAAAGGGCAGCGGGGAG +
Preference number: 4 (lower is better)
Translates to: QIQNVPRRLQGLWVWRNTRNLPC*PKGSGE
Trigger: CTCCCCGCTGCCCTTTGGCCAACAGGGTAGATTTCT...CGTATTTCTCCAGACCCAGAGGCCCTGAAGCCTCCGTGGAACATTCTGGATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR TCA 90 bp CCACGGAGGCTTCAGGGCCTCTGGGTCTGGAGAAATACGTTCGCTAGAAAAATAGGGAATGGTCCGCAGTaGCCACGGTCAGAGTGTCTT +
Preference number: 4 (lower is better)
Translates to: PRRLQGLWVWRNTFARKIGNGPQ*PRSECL
Trigger: AAGACACTCTGACCGTGGTCACTGCGGACCATTCCC...TATTTTTCTAGCGAACGTATTTCTCCAGACCCAGAGGCCCTGAAGCCTCCGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR TCA 90 bp GGCGGCAGACTTTGGTTTCTTGGGTCCCCTTTCTTGCAGTTGCAGAGGCTGAGGCATACAGGATGGCAGTaGAGGGCTTCTTGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: GGRLWFLGSPFLQLQRLRHTGWQ*RASCLC
Trigger: ACACAGACAAGAAGCCCTTCACTGCCATCCTGTATG...CCTCAGCCTCTGCAACTGCAAGAAAGGGGACCCAAGAAACCAAAGTCTGCCGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR GCA 90 bp TGCCCAAGAGAAATCTACCCTGTTGGCCAAAGGGCAGCGGGGAGGGAGCAAAGGTCTGTACTCTCTGCCTaGCCAAGAGAAATCTACCCT +
Preference number: 4 (lower is better)
Translates to: CPREIYPVGQRAAGREQRSVLSA*PREIYP
Trigger: AGGGTAGATTTCTCTTGGGCAGGCAGAGAGTACAGA...CCTTTGCTCCCTCCCCGCTGCCCTTTGGCCAACAGGGTAGATTTCTCTTGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR GCA 90 bp AGGGGAGCGAGGTGGGCGGCAGACTTTGGTTTCTTGGGTCCCCTTTCTTGCAGTGCAGTCTGTACTCTCTaGCTGCCCAAGAGAAATCTA +
Preference number: 4 (lower is better)
Translates to: RGARWAADFGFLGPLSCSAVCTL*LPKRNL
Trigger: TAGATTTCTCTTGGGCAGGCAGAGAGTACAGACTGC...ACTGCAAGAAAGGGGACCCAAGAAACCAAAGTCTGCCGCCCACCTCGCTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp GGAGCGAGGTGGGCGGCAGACTTTGGTTTCTTGGGTCCCCTTTCTTGCAGTTGCAGAATGGTGAAATCATaGTGCACCCCAAGACCTGCT +
Preference number: 4 (lower is better)
Translates to: GARWAADFGFLGPLSCSCRMVKS*CTPRPA
Trigger: AGCAGGTCTTGGGGTGCACCATGATTTCACCATTCT...GCAACTGCAAGAAAGGGGACCCAAGAAACCAAAGTCTGCCGCCCACCTCGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374832.5
ENST00000374840.8
CDS-3UTR CCA 90 bp GATCCAGAATGTTCCACGGAGGCTTCAGGGCCTCTGGGTCTGGAGAAATACGTTGCACTGTCAGGGACCTaGGCATTGGTGTTGTACGTC +
Preference number: 4 (lower is better)
Translates to: DPECSTEASGPLGLEKYVALSGT*ALVLYV
Trigger: GACGTACAACACCAATGCCCAGGTCCCTGACAGTGC...AACGTATTTCTCCAGACCCAGAGGCCCTGAAGCCTCCGTGGAACATTCTGGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp GGCAGACTTTGGTTTCTTGGGTCCCCTTTCTTGCAGTTGCAGAGGCTGAGGAGGCATGGTTCACTCTCGTaGTGGTCACAATGCCCACAG +
Preference number: 4 (lower is better)
Translates to: GRLWFLGSPFLQLQRLRRHGSLS*WSQCPQ
Trigger: CTGTGGGCATTGTGACCACCACGAGAGTGAACCATG...CCTCCTCAGCCTCTGCAACTGCAAGAAAGGGGACCCAAGAAACCAAAGTCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp GGCGGCAGACTTTGGTTTCTTGGGTCCCCTTTCTTGCAGTTGCAGAGGCTGAGGCGGTTCCAGATGAAGTaGGAGTGCTTGTATCTCGGT +
Preference number: 4 (lower is better)
Translates to: GGRLWFLGSPFLQLQRLRRFQMK*ECLYLG
Trigger: ACCGAGATACAAGCACTCCCACTTCATCTGGAACCG...CCTCAGCCTCTGCAACTGCAAGAAAGGGGACCCAAGAAACCAAAGTCTGCCGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp GATCCAGAATGTTCCACGGAGGCTTCAGGGCCTCTGGGTCTGGAGAAATACGTTTTCTTCCGCAGGATCTaGATGGCCACCACCACCATC +
Preference number: 4 (lower is better)
Translates to: DPECSTEASGPLGLEKYVFFRRI*MATTTI
Trigger: GATGGTGGTGGTGGCCATCCAGATCCTGCGGAAGAA...AACGTATTTCTCCAGACCCAGAGGCCCTGAAGCCTCCGTGGAACATTCTGGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp TCAGATCCAGAATGTTCCACGGAGGCTTCAGGGCCTCTGGGTCTGGAGAAATACCCTTCATGGTGCCCGTaGTCAATTCTGCCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: SDPECSTEASGPLGLEKYPSWCP*SILPPS
Trigger: GGAAGGAGGCAGAATTGACCACGGGCACCATGAAGG...GTATTTCTCCAGACCCAGAGGCCCTGAAGCCTCCGTGGAACATTCTGGATCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp CCACGGAGGCTTCAGGGCCTCTGGGTCTGGAGAAATACGTTCGCTAGAAAAATAGTGAAGACGTGGGAATaGTCCGCAGTGACCACGGTC +
Preference number: 4 (lower is better)
Translates to: PRRLQGLWVWRNTFARKIVKTWE*SAVTTV
Trigger: GACCGTGGTCACTGCGGACCATTCCCACGTCTTCAC...TATTTTTCTAGCGAACGTATTTCTCCAGACCCAGAGGCCCTGAAGCCTCCGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp TTCCACGGAGGCTTCAGGGCCTCTGGGTCTGGAGAAATACGTTCGCTAGAAAAAGTGAAGACGTGGGAATaGTCCGCAGTGACCACGGTC +
Preference number: 4 (lower is better)
Translates to: FHGGFRASGSGEIRSLEKVKTWE*SAVTTV
Trigger: GACCGTGGTCACTGCGGACCATTCCCACGTCTTCAC...TTTTTCTAGCGAACGTATTTCTCCAGACCCAGAGGCCCTGAAGCCTCCGTGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp GATCCAGAATGTTCCACGGAGGCTTCAGGGCCTCTGGGTCTGGAGAAATACGTTTGCCGTGTGGGAAGTTaGCATCTGTCACGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: DPECSTEASGPLGLEKYVCRVGS*HLSRAC
Trigger: ACAAGCCCGTGACAGATGCCAACTTCCCACACGGCA...AACGTATTTCTCCAGACCCAGAGGCCCTGAAGCCTCCGTGGAACATTCTGGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR TCA 90 bp TACTCTCTGCCTGCCCAAGAGAAATCTACCCTGTTGGCCAAAGGGCAGCGGGGATTGGTGTTGAGCTTCTaGAGCTCCAGGGCATATTTC +
Preference number: 4 (lower is better)
Translates to: YSLPAQEKSTLLAKGQRGLVLSF*SSRAYF
Trigger: GAAATATGCCCTGGAGCTTCAGAAGCTCAACACCAA...TCCCCGCTGCCCTTTGGCCAACAGGGTAGATTTCTCTTGGGCAGGCAGAGAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR GCA 90 bp GTCTGTACTCTCTGCCTGCCCAAGAGAAATCTACCCTGTTGGCCAAAGGGCAGCGCTTTTCCTTCATGGTaGCCGTGGTCAATTCTGCCT +
Preference number: 4 (lower is better)
Translates to: VCTLCLPKRNLPCWPKGSAFPSW*PWSILP
Trigger: AGGCAGAATTGACCACGGGCACCATGAAGGAAAAGC...GCTGCCCTTTGGCCAACAGGGTAGATTTCTCTTGGGCAGGCAGAGAGTACAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR GCA 90 bp ACGTTCGCTAGAAAAATAAGAGGCTTTGAGAATGTCTGCAGTCTGTACTCTCTGCCGAGGAGGTCAAGCTaGCTGCCTGCCCGATGGCCC +
Preference number: 4 (lower is better)
Translates to: TFARKIRGFENVCSLYSLPRRSS*LPARWP
Trigger: GGGCCATCGGGCAGGCAGGCAGCTTGACCTCCTCGG...CAGAGAGTACAGACTGCAGACATTCTCAAAGCCTCTTATTTTTCTAGCGAACGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR GCA 90 bp TGTACTCTCTGCCTGCCCAAGAGAAATCTACCCTGTTGGCCAAAGGGCAGCGGGGCAGTCTGTACTCTCTaGCTGCCCAAGAGAAATCTA +
Preference number: 4 (lower is better)
Translates to: CTLCLPKRNLPCWPKGSGAVCTL*LPKRNL
Trigger: TAGATTTCTCTTGGGCAGGCAGAGAGTACAGACTGC...CCCGCTGCCCTTTGGCCAACAGGGTAGATTTCTCTTGGGCAGGCAGAGAGTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR GCA 90 bp TACTCTCTGCCTGCCCAAGAGAAATCTACCCTGTTGGCCAAAGGGCAGCGGGGAGCAGTCTGTACTCTCTaGCTGCCCAAGAGAAATCTA +
Preference number: 4 (lower is better)
Translates to: YSLPAQEKSTLLAKGQRGAVCTL*LPKRNL
Trigger: TAGATTTCTCTTGGGCAGGCAGAGAGTACAGACTGC...TCCCCGCTGCCCTTTGGCCAACAGGGTAGATTTCTCTTGGGCAGGCAGAGAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp GGCAGACTTTGGTTTCTTGGGTCCCCTTTCTTGCAGTTGCAGAGGCTGAGGAGGGGTTCACTCTCGTGGTaGTCACAATGCCCACAGATT +
Preference number: 4 (lower is better)
Translates to: GRLWFLGSPFLQLQRLRRGSLSW*SQCPQI
Trigger: AATCTGTGGGCATTGTGACCACCACGAGAGTGAACC...CCTCCTCAGCCTCTGCAACTGCAAGAAAGGGGACCCAAGAAACCAAAGTCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp GCGAGGTGGGCGGCAGACTTTGGTTTCTTGGGTCCCCTTTCTTGCAGTTGCAGATTGGCTTTTCCTTCATaGTGCCCGTGGTCAATTCTG +
Preference number: 4 (lower is better)
Translates to: ARWAADFGFLGPLSCSCRLAFPS*CPWSIL
Trigger: CAGAATTGACCACGGGCACCATGAAGGAAAAGCCAA...TCTGCAACTGCAAGAAAGGGGACCCAAGAAACCAAAGTCTGCCGCCCACCTCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp GGCGGCAGACTTTGGTTTCTTGGGTCCCCTTTCTTGCAGTTGCAGAGGCTGAGGGAGCATAGTCCACCATaGAGACATTCTCTCGTTCAC +
Preference number: 4 (lower is better)
Translates to: GGRLWFLGSPFLQLQRLREHSPP*RHSLVH
Trigger: GTGAACGAGAGAATGTCTCCATGGTGGACTATGCTC...CCTCAGCCTCTGCAACTGCAAGAAAGGGGACCCAAGAAACCAAAGTCTGCCGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp CCACGGAGGCTTCAGGGCCTCTGGGTCTGGAGAAATACGTTCGCTAGAAAAATAGTGGGCGGCAGACTTTaGTTTCTTGGGTCCCCTTTC +
Preference number: 4 (lower is better)
Translates to: PRRLQGLWVWRNTFARKIVGGRL*FLGSPF
Trigger: GAAAGGGGACCCAAGAAACCAAAGTCTGCCGCCCAC...TATTTTTCTAGCGAACGTATTTCTCCAGACCCAGAGGCCCTGAAGCCTCCGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR TCA 90 bp GTCTGTACTCTCTGCCTGCCCAAGAGAAATCTACCCTGTTGGCCAAAGGGCAGCTTGGTGTTGAGCTTCTaGAGCTCCAGGGCATATTTC +
Preference number: 4 (lower is better)
Translates to: VCTLCLPKRNLPCWPKGSLVLSF*SSRAYF
Trigger: GAAATATGCCCTGGAGCTTCAGAAGCTCAACACCAA...GCTGCCCTTTGGCCAACAGGGTAGATTTCTCTTGGGCAGGCAGAGAGTACAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR TCA 90 bp GATCCAGAATGTTCCACGGAGGCTTCAGGGCCTCTGGGTCTGGAGAAATACGTTCATACAGGATGGCAGTaGAGGGCTTCTTGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: DPECSTEASGPLGLEKYVHTGWQ*RASCLC
Trigger: ACACAGACAAGAAGCCCTTCACTGCCATCCTGTATG...AACGTATTTCTCCAGACCCAGAGGCCCTGAAGCCTCCGTGGAACATTCTGGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR TCA 90 bp CCACGGAGGCTTCAGGGCCTCTGGGTCTGGAGAAATACGTTCGCTAGAAAAATAAGCAAGGCCTTGTCCTaGGGAGAAAGACCTCAACTC +
Preference number: 4 (lower is better)
Translates to: PRRLQGLWVWRNTFARKISKALS*GERPQL
Trigger: GAGTTGAGGTCTTTCTCCTCAGGACAAGGCCTTGCT...TATTTTTCTAGCGAACGTATTTCTCCAGACCCAGAGGCCCTGAAGCCTCCGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR TCA 90 bp GAGGGGAGCGAGGTGGGCGGCAGACTTTGGTTTCTTGGGTCCCCTTTCTTGCAGTGGTCAGATGTTAACTaGTGTTCCAATCCTCTTTCA +
Preference number: 4 (lower is better)
Translates to: EGSEVGGRLWFLGSPFLQWSDVN*CSNPLS
Trigger: TGAAAGAGGATTGGAACATCAGTTAACATCTGACCA...CTGCAAGAAAGGGGACCCAAGAAACCAAAGTCTGCCGCCCACCTCGCTCCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374832.5
CDS-3UTR GCA 90 bp GTCTGTACTCTCTGCCTGCCCAAGAGAAATCTACCCTGTTGGCCAAAGGGCAGCTATTTCAGTGTCTCTTaGGCTTGGTCTCGCCAGTAC +
Preference number: 4 (lower is better)
Translates to: VCTLCLPKRNLPCWPKGSYFSVS*AWSRQY
Trigger: GTACTGGCGAGACCAAGCGCAAGAGACACTGAAATA...GCTGCCCTTTGGCCAACAGGGTAGATTTCTCTTGGGCAGGCAGAGAGTACAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR GCA 90 bp CCACGGAGGCTTCAGGGCCTCTGGGTCTGGAGAAATACGTTCGCTAGAAAAATATCGTGGTGGTCACAATaGCCACAGATTTCCCAGCGT +
Preference number: 4 (lower is better)
Translates to: PRRLQGLWVWRNTFARKISWWSQ*PQISQR
Trigger: ACGCTGGGAAATCTGTGGGCATTGTGACCACCACGA...TATTTTTCTAGCGAACGTATTTCTCCAGACCCAGAGGCCCTGAAGCCTCCGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR GCA 90 bp GTCTGTACTCTCTGCCTGCCCAAGAGAAATCTACCCTGTTGGCCAAAGGGCAGCTCTGTACTCTCTGCCTaGCCAAGAGAAATCTACCCT +
Preference number: 4 (lower is better)
Translates to: VCTLCLPKRNLPCWPKGSSVLSA*PREIYP
Trigger: AGGGTAGATTTCTCTTGGGCAGGCAGAGAGTACAGA...GCTGCCCTTTGGCCAACAGGGTAGATTTCTCTTGGGCAGGCAGAGAGTACAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR GCA 90 bp GGCAGACTTTGGTTTCTTGGGTCCCCTTTCTTGCAGTTGCAGAGGCTGAGGAGGTCTGTACTCTCTGCCTaGCCAAGAGAAATCTACCCT +
Preference number: 4 (lower is better)
Translates to: GRLWFLGSPFLQLQRLRRSVLSA*PREIYP
Trigger: AGGGTAGATTTCTCTTGGGCAGGCAGAGAGTACAGA...CCTCCTCAGCCTCTGCAACTGCAAGAAAGGGGACCCAAGAAACCAAAGTCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp GGCAGACTTTGGTTTCTTGGGTCCCCTTTCTTGCAGTTGCAGAGGCTGAGGAGGAGAATGGTGAAATCATaGTGCACCCCAAGACCTGCT +
Preference number: 4 (lower is better)
Translates to: GRLWFLGSPFLQLQRLRRRMVKS*CTPRPA
Trigger: AGCAGGTCTTGGGGTGCACCATGATTTCACCATTCT...CCTCCTCAGCCTCTGCAACTGCAAGAAAGGGGACCCAAGAAACCAAAGTCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374832.5
ENST00000374840.8
CDS-3UTR CCA 90 bp GATCCAGAATGTTCCACGGAGGCTTCAGGGCCTCTGGGTCTGGAGAAATACGTTGGTTCACTCTCGTGGTaGTCACAATGCCCACAGATT +
Preference number: 4 (lower is better)
Translates to: DPECSTEASGPLGLEKYVGSLSW*SQCPQI
Trigger: AATCTGTGGGCATTGTGACCACCACGAGAGTGAACC...AACGTATTTCTCCAGACCCAGAGGCCCTGAAGCCTCCGTGGAACATTCTGGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp TTCCACGGAGGCTTCAGGGCCTCTGGGTCTGGAGAAATACGTTCGCTAGAAAAACATGGTTCACTCTCGTaGTGGTCACAATGCCCACAG +
Preference number: 4 (lower is better)
Translates to: FHGGFRASGSGEIRSLEKHGSLS*WSQCPQ
Trigger: CTGTGGGCATTGTGACCACCACGAGAGTGAACCATG...TTTTTCTAGCGAACGTATTTCTCCAGACCCAGAGGCCCTGAAGCCTCCGTGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp GTCTGGAGAAATACGTTCGCTAGAAAAATAAGAGGCTTTGAGAATGTCTGCAGTTGCCTGCCTGCCCGATaGCCCGGTCCATCTCCACCG +
Preference number: 4 (lower is better)
Translates to: VWRNTFARKIRGFENVCSCLPAR*PGPSPP
Trigger: CGGTGGAGATGGACCGGGCCATCGGGCAGGCAGGCA...ACTGCAGACATTCTCAAAGCCTCTTATTTTTCTAGCGAACGTATTTCTCCAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR GCA 90 bp ACGTTCGCTAGAAAAATAAGAGGCTTTGAGAATGTCTGCAGTCTGTACTCTCTGCGCTTACCCCCACGGTaGCCTCATTGGCCTTCACCC +
Preference number: 4 (lower is better)
Translates to: TFARKIRGFENVCSLYSLRLPPR*PHWPSP
Trigger: GGGTGAAGGCCAATGAGGGCACCGTGGGGGTAAGCG...CAGAGAGTACAGACTGCAGACATTCTCAAAGCCTCTTATTTTTCTAGCGAACGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp TCAGATCCAGAATGTTCCACGGAGGCTTCAGGGCCTCTGGGTCTGGAGAAATACTTGGCTTTTCCTTCATaGTGCCCGTGGTCAATTCTG +
Preference number: 4 (lower is better)
Translates to: SDPECSTEASGPLGLEKYLAFPS*CPWSIL
Trigger: CAGAATTGACCACGGGCACCATGAAGGAAAAGCCAA...GTATTTCTCCAGACCCAGAGGCCCTGAAGCCTCCGTGGAACATTCTGGATCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR TCA 90 bp CCACGGAGGCTTCAGGGCCTCTGGGTCTGGAGAAATACGTTCGCTAGAAAAATAGCTTGTATCTCGGTTTaGAGCTCTTCCAGGTGTCAA +
Preference number: 4 (lower is better)
Translates to: PRRLQGLWVWRNTFARKIACISV*SSSRCQ
Trigger: TTGACACCTGGAAGAGCTTCAAACCGAGATACAAGC...TATTTTTCTAGCGAACGTATTTCTCCAGACCCAGAGGCCCTGAAGCCTCCGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR GCA 90 bp CCACGGAGGCTTCAGGGCCTCTGGGTCTGGAGAAATACGTTCGCTAGAAAAATAATGGTGAAATCATGGTaGACCCCAAGACCTGCTTTA +
Preference number: 4 (lower is better)
Translates to: PRRLQGLWVWRNTFARKIMVKSW*TPRPAL
Trigger: TAAAGCAGGTCTTGGGGTGCACCATGATTTCACCAT...TATTTTTCTAGCGAACGTATTTCTCCAGACCCAGAGGCCCTGAAGCCTCCGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374832.5
ENST00000374840.8
CDS-3UTR CCA 90 bp ACGTTCGCTAGAAAAATAAGAGGCTTTGAGAATGTCTGCAGTCTGTACTCTCTGGTGAAGACGTGGGAATaGTCCGCAGTGACCACGGTC +
Preference number: 4 (lower is better)
Translates to: TFARKIRGFENVCSLYSLVKTWE*SAVTTV
Trigger: GACCGTGGTCACTGCGGACCATTCCCACGTCTTCAC...CAGAGAGTACAGACTGCAGACATTCTCAAAGCCTCTTATTTTTCTAGCGAACGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR TCA 90 bp AGAAATACGTTCGCTAGAAAAATAAGAGGCTTTGAGAATGTCTGCAGTCTGTACGGGCATCTCGTTGTCTaGGTACCAGTCCCGGTCAGC +
Preference number: 4 (lower is better)
Translates to: RNTFARKIRGFENVCSLYGHLVV*VPVPVS
Trigger: GCTGACCGGGACTGGTACTCAGACAACGAGATGCCC...GTACAGACTGCAGACATTCTCAAAGCCTCTTATTTTTCTAGCGAACGTATTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR TCA 90 bp ACGTTCGCTAGAAAAATAAGAGGCTTTGAGAATGTCTGCAGTCTGTACTCTCTGCCGTGCGGTTCCAGATaGAGTGGGAGTGCTTGTATC +
Preference number: 4 (lower is better)
Translates to: TFARKIRGFENVCSLYSLPCGSR*SGSACI
Trigger: GATACAAGCACTCCCACTTCATCTGGAACCGCACGG...CAGAGAGTACAGACTGCAGACATTCTCAAAGCCTCTTATTTTTCTAGCGAACGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR TCA 90 bp GTCTGGAGAAATACGTTCGCTAGAAAAATAAGAGGCTTTGAGAATGTCTGCAGTCACCATCTCGGAGAGTaGCGGGTCCGTCACGTTGTT +
Preference number: 4 (lower is better)
Translates to: VWRNTFARKIRGFENVCSHHLGE*RVRHVV
Trigger: AACAACGTGACGGACCCGTCACTCTCCGAGATGGTG...ACTGCAGACATTCTCAAAGCCTCTTATTTTTCTAGCGAACGTATTTCTCCAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR TCA 90 bp ACGTTCGCTAGAAAAATAAGAGGCTTTGAGAATGTCTGCAGTCTGTACTCTCTGCTGGTGGTCTTGGAGTaGGTGAGTGAGCAAGGCCTT +
Preference number: 4 (lower is better)
Translates to: TFARKIRGFENVCSLYSLLVVLE*VSEQGL
Trigger: AAGGCCTTGCTCACTCACTCACTCCAAGACCACCAG...CAGAGAGTACAGACTGCAGACATTCTCAAAGCCTCTTATTTTTCTAGCGAACGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374840.8
ENST00000539907.5
CDS-3UTR CCA 90 bp ACGTTCGCTAGAAAAATAAGAGGCTTTGAGAATGTCTGCAGTCTGTACTCTCTGTGCCGTGTGGGAAGTTaGCATCTGTCACGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: TFARKIRGFENVCSLYSLCRVGS*HLSRAC
Trigger: ACAAGCCCGTGACAGATGCCAACTTCCCACACGGCA...CAGAGAGTACAGACTGCAGACATTCTCAAAGCCTCTTATTTTTCTAGCGAACGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR GCA 90 bp GTCTGGAGAAATACGTTCGCTAGAAAAATAAGAGGCTTTGAGAATGTCTGCAGTGCCCGTGGTCAATTCTaGCTCCTTCCACCAGCAAGA +
Preference number: 4 (lower is better)
Translates to: VWRNTFARKIRGFENVCSARGQF*LLPPAR
Trigger: TCTTGCTGGTGGAAGGAGGCAGAATTGACCACGGGC...ACTGCAGACATTCTCAAAGCCTCTTATTTTTCTAGCGAACGTATTTCTCCAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp AGAAATACGTTCGCTAGAAAAATAAGAGGCTTTGAGAATGTCTGCAGTCTGTACCCAGCCTCGTGCCCCTaGCTTTCTCGTCACTCTCAT +
Preference number: 4 (lower is better)
Translates to: RNTFARKIRGFENVCSLYPASCP*LSRHSH
Trigger: ATGAGAGTGACGAGAAAGCCAGGGGCACGAGGCTGG...GTACAGACTGCAGACATTCTCAAAGCCTCTTATTTTTCTAGCGAACGTATTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp AGAAATACGTTCGCTAGAAAAATAAGAGGCTTTGAGAATGTCTGCAGTCTGTACGGAGGGAGCAAAGGCTaGAGGCCAGAAGTGGGTTTG +
Preference number: 4 (lower is better)
Translates to: RNTFARKIRGFENVCSLYGGSKG*RPEVGL
Trigger: CAAACCCACTTCTGGCCTCCAGCCTTTGCTCCCTCC...GTACAGACTGCAGACATTCTCAAAGCCTCTTATTTTTCTAGCGAACGTATTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp ACGTTCGCTAGAAAAATAAGAGGCTTTGAGAATGTCTGCAGTCTGTACTCTCTGAGGCTTCAGGGCCTCTaGGTCTGGAGAAATACGTTC +
Preference number: 4 (lower is better)
Translates to: TFARKIRGFENVCSLYSLRLQGL*VWRNTF
Trigger: GAACGTATTTCTCCAGACCCAGAGGCCCTGAAGCCT...CAGAGAGTACAGACTGCAGACATTCTCAAAGCCTCTTATTTTTCTAGCGAACGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CCA 90 bp GTCTGGAGAAATACGTTCGCTAGAAAAATAAGAGGCTTTGAGAATGTCTGCAGTCAGGGCCTCTGGGTCTaGAGAAATACGTTCGCTAGA +
Preference number: 4 (lower is better)
Translates to: VWRNTFARKIRGFENVCSQGLWV*RNTFAR
Trigger: TCTAGCGAACGTATTTCTCCAGACCCAGAGGCCCTG...ACTGCAGACATTCTCAAAGCCTCTTATTTTTCTAGCGAACGTATTTCTCCAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR TCA 90 bp AGAAATACGTTCGCTAGAAAAATAAGAGGCTTTGAGAATGTCTGCAGTCTGTACTGTATCCACCAAATGTaGAGACGTGGGAATGGTCCG +
Preference number: 4 (lower is better)
Translates to: RNTFARKIRGFENVCSLYCIHQM*RRGNGP
Trigger: CGGACCATTCCCACGTCTTCACATTTGGTGGATACA...GTACAGACTGCAGACATTCTCAAAGCCTCTTATTTTTCTAGCGAACGTATTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS GCA 90 bp CAGGACGCTCAGGGGGTAGAGGGCCAGCGCGAGCAGCAGGGGGCCTaGAGCAAGGCTGCCTGCCGAGCTGGCAGGAGCACAGTGGCCGAG +
Preference number: 5 (lower is better)
Translates to: QDAQGVEGQREQQGA*SKAACRAGRSTVAE
Trigger: CTCGGCCACTGTGCTCCTGCCAGCTCGGCAGGCAGCCTTGCTGCAGGCCCCCTGCTGCTCGCGCTGGCCCTCTACCCCCTGAGCGTCCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000374829.2
ENST00000374830.2
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS CCA 90 bp ATCCTGCGCAGAGCACTGGCGAGGGTCCGTCCAGGCACAAGCGCGTaGGAGCACGGAGCCAGGATAGCGGGCGCGGAGTGGCGGGAGCGC +
Preference number: 5 (lower is better)
Translates to: ILRRALARVRPGTSA*EHGARIAGAEWRER
Trigger: GCGCTCCCGCCACTCCGCGCCCGCTATCCTGGCTCCGTGCTCCCACGCGCTTGTGCCTGGACGGACCCTCGCCAGTGCTCTGCGCAGGAT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374840.8
CDS CCA 90 bp TCTCTGCGCAGAGCACTGGCGAGGGTCCGTCCAGGCACAAGCGCGTaGGAGCACGGAGCCAGGATAGCGGGCGCGGAGTGGCGGGAGCGC +
Preference number: 5 (lower is better)
Translates to: SLRRALARVRPGTSA*EHGARIAGAEWRER
Trigger: GCGCTCCCGCCACTCCGCGCCCGCTATCCTGGCTCCGTGCTCCCACGCGCTTGTGCCTGGACGGACCCTCGCCAGTGCTCTGCGCAGAGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000468526.1
ENST00000539907.5
ENST00000540617.5
CDS CCA 90 bp CCAGCGCGAGCAGCAGGGGGCCTGCAGCAAGGCTGCCTGCCGAGCTaGCAGGAGCACAGTGGCCGAGGTTGGCCCCGATGCAGGCTGCAT +
Preference number: 5 (lower is better)
Translates to: PARAAGGLQQGCLPS*QEHSGRGWPRCRLH
Trigger: ATGCAGCCTGCATCGGGGCCAACCTCGGCCACTGTGCTCCTGCCAGCTCGGCAGGCAGCCTTGCTGCAGGCCCCCTGCTGCTCGCGCTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374829.2
ENST00000374830.2
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CAA 90 bp GGGGGCTGCCGTGTGGGAAGTTGGCATCTGTCACGGGCTTGTGGGTGCCCGGGCGCATCTGTCACGGGCTaGTGGGTGCCCGGGCCCTGG +
Preference number: 5 (lower is better)
Translates to: GGCRVGSWHLSRACGCPGASVTG*WVPGPW
Trigger: CCAGGGCCCGGGCACCCACAAGCCCGTGACAGATGC...GCCCGGGCACCCACAAGCCCGTGACAGATGCCAACTTCCCACACGGCAGCCCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374830.2
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CAA 90 bp GGGGCTGCCGTGTGGGAAGTTGGCATCTGTCACGGGCTTGTGGGTGCCCGGGCCTGCGCCATGGGGCCCTaGGAGAAGACGGCCACGTCC +
Preference number: 5 (lower is better)
Translates to: GAAVWEVGICHGLVGARACAMGP*EKTATS
Trigger: GGACGTGGCCGTCTTCTCCAAGGGCCCCATGGCGCA...GGCCCGGGCACCCACAAGCCCGTGACAGATGCCAACTTCCCACACGGCAGCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000374830.2
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CAA 90 bp GGGGGCTGCCGTGTGGGAAGTTGGCATCTGTCACGGGCTTGTGGGTGCCCGGGCGCACAGTGGCCGAGGTaGGCCCCGATGCAGGCTGCA +
Preference number: 5 (lower is better)
Translates to: GGCRVGSWHLSRACGCPGAQWPR*APMQAA
Trigger: TGCAGCCTGCATCGGGGCCAACCTCGGCCACTGTGC...GCCCGGGCACCCACAAGCCCGTGACAGATGCCAACTTCCCACACGGCAGCCCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000374830.2
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS GCA 90 bp GGGGGCTGCCGTGTGGGAAGTTGGCATCTGTCACGGGCTTGTGGGTaGCCGGGCCCTGGGCCCTCAGAACAGGACGCTCAGGGGGTAGAG +
Preference number: 5 (lower is better)
Translates to: GGCRVGSWHLSRACG*PGPGPSEQDAQGVE
Trigger: CTCTACCCCCTGAGCGTCCTGTTCTGAGGGCCCAGGGCCCGGGCACCCACAAGCCCGTGACAGATGCCAACTTCCCACACGGCAGCCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000374829.2
ENST00000374830.2
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS CCA 90 bp AGGGGGCCTGCAGCAAGGCTGCCTGCCGAGCTGGCAGGAGCACAGTaGCCGAGGTTGGCCCCGATGCAGGCTGCATACGCCATCACGTGG +
Preference number: 5 (lower is better)
Translates to: RGPAARLPAELAGAQ*PRLAPMQAAYAITW
Trigger: CCACGTGATGGCGTATGCAGCCTGCATCGGGGCCAACCTCGGCCACTGTGCTCCTGCCAGCTCGGCAGGCAGCCTTGCTGCAGGCCCCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374829.2
ENST00000374830.2
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CAA 90 bp GGCTGCCGTGTGGGAAGTTGGCATCTGTCACGGGCTTGTGGGTGCCCGGGCCCTGCACAGTGGCCGAGGTaGGCCCCGATGCAGGCTGCA +
Preference number: 5 (lower is better)
Translates to: GCRVGSWHLSRACGCPGPAQWPR*APMQAA
Trigger: TGCAGCCTGCATCGGGGCCAACCTCGGCCACTGTGC...AGGGCCCGGGCACCCACAAGCCCGTGACAGATGCCAACTTCCCACACGGCAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374830.2
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS CCA 90 bp CCAGCGTCCTTGGCCCAGCGCAGGATGGAGGTGACCTCGTTCCCCTaGGTGGTGTTGCACCGGGAACGCTCAGTGGCTGCGCTTACCCCC +
Preference number: 5 (lower is better)
Translates to: PASLAQRRMEVTSFP*VVLHRERSVAALTP
Trigger: GGGGGTAAGCGCAGCCACTGAGCGTTCCCGGTGCAACACCACCCAGGGGAACGAGGTCACCTCCATCCTGCGCTGGGCCAAGGACGCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000468526.1
ENST00000539907.5
ENST00000540617.5
CDS CCA 90 bp TGTGGGAAGTTGGCATCTGTCACGGGCTTGTGGGTGCCCGGGCCCTaGGCCCTCAGAACAGGACGCTCAGGGGGTAGAGGGCCAGCGCGA +
Preference number: 5 (lower is better)
Translates to: CGKLASVTGLWVPGP*ALRTGRSGGRGPAR
Trigger: TCGCGCTGGCCCTCTACCCCCTGAGCGTCCTGTTCTGAGGGCCCAGGGCCCGGGCACCCACAAGCCCGTGACAGATGCCAACTTCCCACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374829.2
ENST00000374830.2
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS TCA 90 bp GTCCTTACAGCCCTGGCTCAAGGCCTCAGGGGGCATCTCGTTGTCTaGGTACCAGTCCCGGTCAGCCGAGTGGGCGTAGGCGGCGCTGGG +
Preference number: 5 (lower is better)
Translates to: VLTALAQGLRGHLVV*VPVPVSRVGVGGAG
Trigger: CCCAGCGCCGCCTACGCCCACTCGGCTGACCGGGACTGGTACTCAGACAACGAGATGCCCCCTGAGGCCTTGAGCCAGGGCTGTAAGGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000468526.1
ENST00000539907.5
ENST00000540617.5
CDS GCA 90 bp GTGACCACGGTCAGAGTGTCTTCCGAGGAGGTCAAGCTGCCTGCCTaGCCGATGGCCCGGTCCATCTCCACCGCCTCATGCAGGGCCTGC +
Preference number: 5 (lower is better)
Translates to: VTTVRVSSEEVKLPA*PMARSISTASCRAC
Trigger: GCAGGCCCTGCATGAGGCGGTGGAGATGGACCGGGCCATCGGGCAGGCAGGCAGCTTGACCTCCTCGGAAGACACTCTGACCGTGGTCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374829.2
ENST00000374830.2
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS GCA 90 bp CGCAGTGACCACGGTCAGAGTGTCTTCCGAGGAGGTCAAGCTGCCTaGCTGCCCGATGGCCCGGTCCATCTCCACCGCCTCATGCAGGGC +
Preference number: 5 (lower is better)
Translates to: RSDHGQSVFRGGQAA*LPDGPVHLHRLMQG
Trigger: GCCCTGCATGAGGCGGTGGAGATGGACCGGGCCATCGGGCAGGCAGGCAGCTTGACCTCCTCGGAAGACACTCTGACCGTGGTCACTGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374829.2
ENST00000374830.2
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CAA 90 bp GGGCTGCCGTGTGGGAAGTTGGCATCTGTCACGGGCTTGTGGGTGCCCGGGCCCGCCACGAAGGGGAACTaGTCCATCTCCAGCCTGGTC +
Preference number: 5 (lower is better)
Translates to: GLPCGKLASVTGLWVPGPATKGN*SISSLV
Trigger: GACCAGGCTGGAGATGGACAAGTTCCCCTTCGTGGC...GGGCCCGGGCACCCACAAGCCCGTGACAGATGCCAACTTCCCACACGGCAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000540617.5
CDS-3UTR CAA 90 bp AGAAGTGGGTTTGGCCCTTGGGGAAGATTCCAGAGGGGAGCGAGGTGGGCGGCAGCATCTGTCACGGGCTaGTGGGTGCCCGGGCCCTGG +
Preference number: 5 (lower is better)
Translates to: RSGFGPWGRFQRGARWAAASVTG*WVPGPW
Trigger: CCAGGGCCCGGGCACCCACAAGCCCGTGACAGATGC...TGCCGCCCACCTCGCTCCCCTCTGGAATCTTCCCCAAGGGCCAAACCCACTTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS CCA 90 bp CGGTCAGAGTGTCTTCCGAGGAGGTCAAGCTGCCTGCCTGCCCGATaGCCCGGTCCATCTCCACCGCCTCATGCAGGGCCTGCTTGGCTT +
Preference number: 5 (lower is better)
Translates to: RSECLPRRSSCLPAR*PGPSPPPHAGPAWL
Trigger: AAGCCAAGCAGGCCCTGCATGAGGCGGTGGAGATGGACCGGGCCATCGGGCAGGCAGGCAGCTTGACCTCCTCGGAAGACACTCTGACCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374829.2
ENST00000374830.2
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS CCA 90 bp CCCGTGGTCAATTCTGCCTCCACCGCTGGTTTCTGGCTGGCTCCTTaGCGTCAGAGGCCTGTTCGGGGCCAGGCCAAGACCGCTGTGCTC +
Preference number: 5 (lower is better)
Translates to: PVVNSASTAGFWLAP*RQRPVRGQAKTAVL
Trigger: GAGCACAGCGGTCTTGGCCTGGCCCCGAACAGGCCTCTGACGCCAAGGAGCCAGCCAGAAACCAGCGGTGGAGGCAGAATTGACCACGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374829.2
CDS-3UTR CAA 90 bp GGCTGCCGTGTGGGAAGTTGGCATCTGTCACGGGCTTGTGGGTGCCCGGGCCCTTCAGGGGGCATCTCGTaGTCTGAGTACCAGTCCCGG +
Preference number: 5 (lower is better)
Translates to: GCRVGSWHLSRACGCPGPSGGIS*SEYQSR
Trigger: CCGGGACTGGTACTCAGACAACGAGATGCCCCCTGA...AGGGCCCGGGCACCCACAAGCCCGTGACAGATGCCAACTTCCCACACGGCAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CAA 90 bp AGAAGTGGGTTTGGCCCTTGGGGAAGATTCCAGAGGGGAGCGAGGTGGGCGGCATGCGCCATGGGGCCCTaGGAGAAGACGGCCACGTCC +
Preference number: 5 (lower is better)
Translates to: RSGFGPWGRFQRGARWAACAMGP*EKTATS
Trigger: GGACGTGGCCGTCTTCTCCAAGGGCCCCATGGCGCA...TGCCGCCCACCTCGCTCCCCTCTGGAATCTTCCCCAAGGGCCAAACCCACTTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CAA 90 bp GGCTGCCGTGTGGGAAGTTGGCATCTGTCACGGGCTTGTGGGTGCCCGGGCCCTCTGCCGTGTGGGAAGTaGGCATCTGTCACGGGCTTG +
Preference number: 5 (lower is better)
Translates to: GCRVGSWHLSRACGCPGPLPCGK*ASVTGL
Trigger: CAAGCCCGTGACAGATGCCAACTTCCCACACGGCAG...AGGGCCCGGGCACCCACAAGCCCGTGACAGATGCCAACTTCCCACACGGCAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374830.2
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CAA 90 bp GGGCTGCCGTGTGGGAAGTTGGCATCTGTCACGGGCTTGTGGGTGCCCGGGCCCAAGTGGGTTTGGCCCTaGGGGAAGATTCCAGAGGGG +
Preference number: 5 (lower is better)
Translates to: GLPCGKLASVTGLWVPGPKWVWP*GKIPEG
Trigger: CCCCTCTGGAATCTTCCCCAAGGGCCAAACCCACTT...GGGCCCGGGCACCCACAAGCCCGTGACAGATGCCAACTTCCCACACGGCAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS TCA 90 bp TGCCCACAGATTTCCCAGCGTCCTTGGCCCAGCGCAGGATGGAGGTaGCCTCGTTCCCCTGGGTGGTGTTGCACCGGGAACGCTCAGTGG +
Preference number: 5 (lower is better)
Translates to: CPQISQRPWPSAGWR*PRSPGWCCTGNAQW
Trigger: CCACTGAGCGTTCCCGGTGCAACACCACCCAGGGGAACGAGGTCACCTCCATCCTGCGCTGGGCCAAGGACGCTGGGAAATCTGTGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000468526.1
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CAA 90 bp GCTGCCGTGTGGGAAGTTGGCATCTGTCACGGGCTTGTGGGTGCCCGGGCCCTGTTGGTGTTGTACGTCTaGGAGAGGGCCACGAAGGGG +
Preference number: 5 (lower is better)
Translates to: AAVWEVGICHGLVGARALLVLYV*ERATKG
Trigger: CCCCTTCGTGGCCCTCTCCAAGACGTACAACACCAA...CAGGGCCCGGGCACCCACAAGCCCGTGACAGATGCCAACTTCCCACACGGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000540617.5
CDS-3UTR CAA 90 bp GGGGCTGCCGTGTGGGAAGTTGGCATCTGTCACGGGCTTGTGGGTGCCCGGGCCTCAGGGACCTGGGCATaGGTGTTGTACGTCTTGGAG +
Preference number: 5 (lower is better)
Translates to: GAAVWEVGICHGLVGARASGTWA*VLYVLE
Trigger: CTCCAAGACGTACAACACCAATGCCCAGGTCCCTGA...GGCCCGGGCACCCACAAGCCCGTGACAGATGCCAACTTCCCACACGGCAGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000540617.5
CDS-3UTR CAA 90 bp GGCTGCCGTGTGGGAAGTTGGCATCTGTCACGGGCTTGTGGGTGCCCGGGCCCTGACGGGTCCGTCACGTaGTTCCTGTTCAGCTCGTAC +
Preference number: 5 (lower is better)
Translates to: GCRVGSWHLSRACGCPGPDGSVT*FLFSSY
Trigger: GTACGAGCTGAACAGGAACAACGTGACGGACCCGTC...AGGGCCCGGGCACCCACAAGCCCGTGACAGATGCCAACTTCCCACACGGCAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CAA 90 bp GAGGGGAGCGAGGTGGGCGGCAGACTTTGGTTTCTTGGGTCCCCTTTCTTGCAGTGCGCCATGGGGCCCTaGGAGAAGACGGCCACGTCC +
Preference number: 5 (lower is better)
Translates to: EGSEVGGRLWFLGSPFLQCAMGP*EKTATS
Trigger: GGACGTGGCCGTCTTCTCCAAGGGCCCCATGGCGCA...CTGCAAGAAAGGGGACCCAAGAAACCAAAGTCTGCCGCCCACCTCGCTCCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CAA 90 bp TCTGCCTGCCCAAGAGAAATCTACCCTGTTGGCCAAAGGGCAGCGGGGAGGGAGTGCGCCATGGGGCCCTaGGAGAAGACGGCCACGTCC +
Preference number: 5 (lower is better)
Translates to: SACPREIYPVGQRAAGRECAMGP*EKTATS
Trigger: GGACGTGGCCGTCTTCTCCAAGGGCCCCATGGCGCA...CTCCCTCCCCGCTGCCCTTTGGCCAACAGGGTAGATTTCTCTTGGGCAGGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CAA 90 bp GCTGCCGTGTGGGAAGTTGGCATCTGTCACGGGCTTGTGGGTGCCCGGGCCCTGAGGCCAGAAGTGGGTTaGGCCCTTGGGGAAGATTCC +
Preference number: 5 (lower is better)
Translates to: AAVWEVGICHGLVGARALRPEVG*ALGEDS
Trigger: GGAATCTTCCCCAAGGGCCAAACCCACTTCTGGCCT...CAGGGCCCGGGCACCCACAAGCCCGTGACAGATGCCAACTTCCCACACGGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CAA 90 bp GGGCTGCCGTGTGGGAAGTTGGCATCTGTCACGGGCTTGTGGGTGCCCGGGCCCTCAGGGACCTGGGCATaGGTGTTGTACGTCATCTCC +
Preference number: 5 (lower is better)
Translates to: GLPCGKLASVTGLWVPGPSGTWA*VLYVIS
Trigger: GGAGATGACGTACAACACCAATGCCCAGGTCCCTGA...GGGCCCGGGCACCCACAAGCCCGTGACAGATGCCAACTTCCCACACGGCAGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539907.5
CDS TCA 90 bp TCTCCAGCCTGGTCTCCTCCCCAGGGTTGTGGTGGAGCTGACCCTTaGGGATGCGGGCAGCCGTCACTGTGGAGACACCCATCCCATCTC +
Preference number: 5 (lower is better)
Translates to: SPAWSPPQGCGGADP*GCGQPSLWRHPSHL
Trigger: GAGATGGGATGGGTGTCTCCACAGTGACGGCTGCCCGCATCCTCAAGGGTCAGCTCCACCACAACCCTGGGGAGGAGACCAGGCTGGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000468526.1
ENST00000540617.5
CDS-3UTR CAA 90 bp GGCTGCCGTGTGGGAAGTTGGCATCTGTCACGGGCTTGTGGGTGCCCGGGCCCTTCAGGGACCTGGGCATaGGTGTTGTACGTCTTGGAG +
Preference number: 5 (lower is better)
Translates to: GCRVGSWHLSRACGCPGPSGTWA*VLYVLE
Trigger: CTCCAAGACGTACAACACCAATGCCCAGGTCCCTGA...AGGGCCCGGGCACCCACAAGCCCGTGACAGATGCCAACTTCCCACACGGCAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000540617.5
CDS-3UTR CAA 90 bp TTGGTTTCTTGGGTCCCCTTTCTTGCAGTTGCAGAGGCTGAGGAGGCCCCCACCGCACAGTGGCCGAGGTaGGCCCCGATGCAGGCTGCA +
Preference number: 5 (lower is better)
Translates to: LVSWVPFLAVAEAEEAPTAQWPR*APMQAA
Trigger: TGCAGCCTGCATCGGGGCCAACCTCGGCCACTGTGC...GGTGGGGGCCTCCTCAGCCTCTGCAACTGCAAGAAAGGGGACCCAAGAAACCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CAA 90 bp TACTCTCTGCCTGCCCAAGAGAAATCTACCCTGTTGGCCAAAGGGCAGCGGGGAGCATCTGTCACGGGCTaGTGGGTGCCCGGGCCCTGG +
Preference number: 5 (lower is better)
Translates to: YSLPAQEKSTLLAKGQRGASVTG*WVPGPW
Trigger: CCAGGGCCCGGGCACCCACAAGCCCGTGACAGATGC...TCCCCGCTGCCCTTTGGCCAACAGGGTAGATTTCTCTTGGGCAGGCAGAGAGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CAA 90 bp GCAAGGCCTTGTCCTGAGGAGAAAGACCTCAACTCCCCTGAAGGAGGGCTGGGCTTCCCCTGGGTGGTGTaGCACCGGGAACGCTCAGTG +
Preference number: 5 (lower is better)
Translates to: ARPCPEEKDLNSPEGGLGFPWVV*HRERSV
Trigger: CACTGAGCGTTCCCGGTGCAACACCACCCAGGGGAA...GCCCAGCCCTCCTTCAGGGGAGTTGAGGTCTTTCTCCTCAGGACAAGGCCTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CAA 90 bp TGCCTGCCCAAGAGAAATCTACCCTGTTGGCCAAAGGGCAGCGGGGAGGGAGCATTCCCCTGGGTGGTGTaGCACCGGGAACGCTCAGTG +
Preference number: 5 (lower is better)
Translates to: CLPKRNLPCWPKGSGEGAFPWVV*HRERSV
Trigger: CACTGAGCGTTCCCGGTGCAACACCACCCAGGGGAA...TGCTCCCTCCCCGCTGCCCTTTGGCCAACAGGGTAGATTTCTCTTGGGCAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CAA 90 bp GCTGCCGTGTGGGAAGTTGGCATCTGTCACGGGCTTGTGGGTGCCCGGGCCCTGAGCAAGAAGAAGCCTTaGGGGTTCTTCCGCAGGATC +
Preference number: 5 (lower is better)
Translates to: AAVWEVGICHGLVGARALSKKKP*GFFRRI
Trigger: GATCCTGCGGAAGAACCCCAAAGGCTTCTTCTTGCT...CAGGGCCCGGGCACCCACAAGCCCGTGACAGATGCCAACTTCCCACACGGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CAA 90 bp GCGAGGTGGGCGGCAGACTTTGGTTTCTTGGGTCCCCTTTCTTGCAGTTGCAGATGCGCCATGGGGCCCTaGGAGAAGACGGCCACGTCC +
Preference number: 5 (lower is better)
Translates to: ARWAADFGFLGPLSCSCRCAMGP*EKTATS
Trigger: GGACGTGGCCGTCTTCTCCAAGGGCCCCATGGCGCA...TCTGCAACTGCAAGAAAGGGGACCCAAGAAACCAAAGTCTGCCGCCCACCTCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CAA 90 bp TACTCTCTGCCTGCCCAAGAGAAATCTACCCTGTTGGCCAAAGGGCAGCGGGGAGCACAGTGGCCGAGGTaGGCCCCGATGCAGGCTGCA +
Preference number: 5 (lower is better)
Translates to: YSLPAQEKSTLLAKGQRGAQWPR*APMQAA
Trigger: TGCAGCCTGCATCGGGGCCAACCTCGGCCACTGTGC...TCCCCGCTGCCCTTTGGCCAACAGGGTAGATTTCTCTTGGGCAGGCAGAGAGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CAA 90 bp TGTACTCTCTGCCTGCCCAAGAGAAATCTACCCTGTTGGCCAAAGGGCAGCGGGGCACAGTGGCCGAGGTaGGCCCCGATGCAGGCTGCA +
Preference number: 5 (lower is better)
Translates to: CTLCLPKRNLPCWPKGSGAQWPR*APMQAA
Trigger: TGCAGCCTGCATCGGGGCCAACCTCGGCCACTGTGC...CCCGCTGCCCTTTGGCCAACAGGGTAGATTTCTCTTGGGCAGGCAGAGAGTACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CAA 90 bp AGAAGTGGGTTTGGCCCTTGGGGAAGATTCCAGAGGGGAGCGAGGTGGGCGGCACTGCCGTGTGGGAAGTaGGCATCTGTCACGGGCTTG +
Preference number: 5 (lower is better)
Translates to: RSGFGPWGRFQRGARWAALPCGK*ASVTGL
Trigger: CAAGCCCGTGACAGATGCCAACTTCCCACACGGCAG...TGCCGCCCACCTCGCTCCCCTCTGGAATCTTCCCCAAGGGCCAAACCCACTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS CCA 90 bp GTTTGGCAAGAAAGCAGCCAAGCTGGGCTGGCGGACGCTCACCTCTaGAAGGCGGAGGCGCTGAGCATGTGTGTATGCGTGGGGAGCATA +
Preference number: 5 (lower is better)
Translates to: VWQESSQAGLADAHL*KAEALSMCVCVGSI
Trigger: TATGCTCCCCACGCATACACACATGCTCAGCGCCTCCGCCTTCCAGAGGTGAGCGTCCGCCAGCCCAGCTTGGCTGCTTTCTTGCCAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374829.2
CDS-3UTR CAA 90 bp GTTTGGCCCTTGGGGAAGATTCCAGAGGGGAGCGAGGTGGGCGGCAGACTTTGGACCTGGGCATTGGTGTaGTACGTCTTGGAGAGGGCC +
Preference number: 5 (lower is better)
Translates to: VWPLGKIPEGSEVGGRLWTWALV*YVLERA
Trigger: GGCCCTCTCCAAGACGTACAACACCAATGCCCAGGT...CCAAAGTCTGCCGCCCACCTCGCTCCCCTCTGGAATCTTCCCCAAGGGCCAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000540617.5
CDS-3UTR CAA 90 bp TTGGGGAAGATTCCAGAGGGGAGCGAGGTGGGCGGCAGACTTTGGTTTCTTGGGGATTTCCCAGCGTCCTaGGCCCAGCGCAGGATGGAG +
Preference number: 5 (lower is better)
Translates to: LGKIPEGSEVGGRLWFLGDFPAS*AQRRME
Trigger: CTCCATCCTGCGCTGGGCCAAGGACGCTGGGAAATC...CCCAAGAAACCAAAGTCTGCCGCCCACCTCGCTCCCCTCTGGAATCTTCCCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CAA 90 bp AAGGCTGGAGGCCAGAAGTGGGTTTGGCCCTTGGGGAAGATTCCAGAGGGGAGCTCAGGGGGCATCTCGTaGTCTGAGTACCAGTCCCGG +
Preference number: 5 (lower is better)
Translates to: KAGGQKWVWPLGKIPEGSSGGIS*SEYQSR
Trigger: CCGGGACTGGTACTCAGACAACGAGATGCCCCCTGA...GCTCCCCTCTGGAATCTTCCCCAAGGGCCAAACCCACTTCTGGCCTCCAGCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CAA 90 bp GGGCTGCCGTGTGGGAAGTTGGCATCTGTCACGGGCTTGTGGGTGCCCGGGCCCTGCTTGTATCTCGGTTaGAAGCTCTTCCAGGTGTCA +
Preference number: 5 (lower is better)
Translates to: GLPCGKLASVTGLWVPGPCLYLG*KLFQVS
Trigger: TGACACCTGGAAGAGCTTCAAACCGAGATACAAGCA...GGGCCCGGGCACCCACAAGCCCGTGACAGATGCCAACTTCCCACACGGCAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CAA 90 bp GAGGGGAGCGAGGTGGGCGGCAGACTTTGGTTTCTTGGGTCCCCTTTCTTGCAGCTGCCGTGTGGGAAGTaGGCATCTGTCACGGGCTTG +
Preference number: 5 (lower is better)
Translates to: EGSEVGGRLWFLGSPFLQLPCGK*ASVTGL
Trigger: CAAGCCCGTGACAGATGCCAACTTCCCACACGGCAG...CTGCAAGAAAGGGGACCCAAGAAACCAAAGTCTGCCGCCCACCTCGCTCCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CAA 90 bp TGCCTGCCCAAGAGAAATCTACCCTGTTGGCCAAAGGGCAGCGGGGAGGGAGCACTGCCGTGTGGGAAGTaGGCATCTGTCACGGGCTTG +
Preference number: 5 (lower is better)
Translates to: CLPKRNLPCWPKGSGEGALPCGK*ASVTGL
Trigger: CAAGCCCGTGACAGATGCCAACTTCCCACACGGCAG...TGCTCCCTCCCCGCTGCCCTTTGGCCAACAGGGTAGATTTCTCTTGGGCAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CAA 90 bp GGCTGGAGGCCAGAAGTGGGTTTGGCCCTTGGGGAAGATTCCAGAGGGGAGCGAAAGTGGGTTTGGCCCTaGGGGAAGATTCCAGAGGGG +
Preference number: 5 (lower is better)
Translates to: GWRPEVGLALGEDSRGERKWVWP*GKIPEG
Trigger: CCCCTCTGGAATCTTCCCCAAGGGCCAAACCCACTT...TCGCTCCCCTCTGGAATCTTCCCCAAGGGCCAAACCCACTTCTGGCCTCCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS CCA 90 bp CCTTCCACCAGCAAGAAGAAGCCTTTGGGGTTCTTCCGCAGGATCTaGATGGCCACCACCACCATCTCGGAGAGTGACGGGTCCGTCACG +
Preference number: 5 (lower is better)
Translates to: PSTSKKKPLGFFRRI*MATTTISESDGSVT
Trigger: CGTGACGGACCCGTCACTCTCCGAGATGGTGGTGGTGGCCATCCAGATCCTGCGGAAGAACCCCAAAGGCTTCTTCTTGCTGGTGGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CAA 90 bp TGCCTGCCCAAGAGAAATCTACCCTGTTGGCCAAAGGGCAGCGGGGAGGGAGCATTGGTGTTGTACGTCTaGGAGAGGGCCACGAAGGGG +
Preference number: 5 (lower is better)
Translates to: CLPKRNLPCWPKGSGEGALVLYV*ERATKG
Trigger: CCCCTTCGTGGCCCTCTCCAAGACGTACAACACCAA...TGCTCCCTCCCCGCTGCCCTTTGGCCAACAGGGTAGATTTCTCTTGGGCAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000540617.5
CDS-3UTR CAA 90 bp GAGGGGAGCGAGGTGGGCGGCAGACTTTGGTTTCTTGGGTCCCCTTTCTTGCAGACCTGGGCATTGGTGTaGTACGTCTTGGAGAGGGCC +
Preference number: 5 (lower is better)
Translates to: EGSEVGGRLWFLGSPFLQTWALV*YVLERA
Trigger: GGCCCTCTCCAAGACGTACAACACCAATGCCCAGGT...CTGCAAGAAAGGGGACCCAAGAAACCAAAGTCTGCCGCCCACCTCGCTCCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000540617.5
CDS-3UTR CAA 90 bp TACTCTCTGCCTGCCCAAGAGAAATCTACCCTGTTGGCCAAAGGGCAGCGGGGATTCCCCTGGGTGGTGTaGCACCGGGAACGCTCAGTG +
Preference number: 5 (lower is better)
Translates to: YSLPAQEKSTLLAKGQRGFPWVV*HRERSV
Trigger: CACTGAGCGTTCCCGGTGCAACACCACCCAGGGGAA...TCCCCGCTGCCCTTTGGCCAACAGGGTAGATTTCTCTTGGGCAGGCAGAGAGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CAA 90 bp CCAGAATGTTCCACGGAGGCTTCAGGGCCTCTGGGTCTGGAGAAATACGTTCGCGATTTCCCAGCGTCCTaGGCCCAGCGCAGGATGGAG +
Preference number: 5 (lower is better)
Translates to: PECSTEASGPLGLEKYVRDFPAS*AQRRME
Trigger: CTCCATCCTGCGCTGGGCCAAGGACGCTGGGAAATC...GCGAACGTATTTCTCCAGACCCAGAGGCCCTGAAGCCTCCGTGGAACATTCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CAA 90 bp TGTACTCTCTGCCTGCCCAAGAGAAATCTACCCTGTTGGCCAAAGGGCAGCGGGGATTTCCCAGCGTCCTaGGCCCAGCGCAGGATGGAG +
Preference number: 5 (lower is better)
Translates to: CTLCLPKRNLPCWPKGSGDFPAS*AQRRME
Trigger: CTCCATCCTGCGCTGGGCCAAGGACGCTGGGAAATC...CCCGCTGCCCTTTGGCCAACAGGGTAGATTTCTCTTGGGCAGGCAGAGAGTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CAA 90 bp GGCTGCCGTGTGGGAAGTTGGCATCTGTCACGGGCTTGTGGGTGCCCGGGCCCTTGCTTGTATCTCGGTTaGAAGCTCTTCCAGGTGTCA +
Preference number: 5 (lower is better)
Translates to: GCRVGSWHLSRACGCPGPCLYLG*KLFQVS
Trigger: TGACACCTGGAAGAGCTTCAAACCGAGATACAAGCA...AGGGCCCGGGCACCCACAAGCCCGTGACAGATGCCAACTTCCCACACGGCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CAA 90 bp GCTGCCGTGTGGGAAGTTGGCATCTGTCACGGGCTTGTGGGTGCCCGGGCCCTGATGAAGTGGGAGTGCTaGTATCTCGGTTTGAAGCTC +
Preference number: 5 (lower is better)
Translates to: AAVWEVGICHGLVGARALMKWEC*YLGLKL
Trigger: GAGCTTCAAACCGAGATACAAGCACTCCCACTTCAT...CAGGGCCCGGGCACCCACAAGCCCGTGACAGATGCCAACTTCCCACACGGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CAA 90 bp GCAAGGCCTTGTCCTGAGGAGAAAGACCTCAACTCCCCTGAAGGAGGGCTGGGCGGTGGGCGGCAGACTTaGGTTTCTTGGGTCCCCTTT +
Preference number: 5 (lower is better)
Translates to: ARPCPEEKDLNSPEGGLGGGRQT*VSWVPF
Trigger: AAAGGGGACCCAAGAAACCAAAGTCTGCCGCCCACC...GCCCAGCCCTCCTTCAGGGGAGTTGAGGTCTTTCTCCTCAGGACAAGGCCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CAA 90 bp TCTGCCTGCCCAAGAGAAATCTACCCTGTTGGCCAAAGGGCAGCGGGGAGGGAGAAGTGGGTTTGGCCCTaGGGGAAGATTCCAGAGGGG +
Preference number: 5 (lower is better)
Translates to: SACPREIYPVGQRAAGREKWVWP*GKIPEG
Trigger: CCCCTCTGGAATCTTCCCCAAGGGCCAAACCCACTT...CTCCCTCCCCGCTGCCCTTTGGCCAACAGGGTAGATTTCTCTTGGGCAGGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CAA 90 bp TTGGCCCTTGGGGAAGATTCCAGAGGGGAGCGAGGTGGGCGGCAGACTTTGGTTGAGAAATCTACCCTGTaGGCCAAAGGGCAGCGGGGA +
Preference number: 5 (lower is better)
Translates to: LALGEDSRGERGGRQTLVEKSTL*AKGQRG
Trigger: TCCCCGCTGCCCTTTGGCCAACAGGGTAGATTTCTC...AACCAAAGTCTGCCGCCCACCTCGCTCCCCTCTGGAATCTTCCCCAAGGGCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS TCA 90 bp CGCCCACCACCTTGTAGCCAGGCCCATTGCCATACAGGATGGCAGTaGAGGGCTTCTTGTCTGTGTCACTCAGCATGGGGGCCAGACCAA +
Preference number: 5 (lower is better)
Translates to: RPPPCSQAHCHTGWQ*RASCLCHSAWGPDQ
Trigger: TTGGTCTGGCCCCCATGCTGAGTGACACAGACAAGAAGCCCTTCACTGCCATCCTGTATGGCAATGGGCCTGGCTACAAGGTGGTGGGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374829.2
ENST00000374830.2
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS CCA 90 bp CCACCAGCAAGAAGAAGCCTTTGGGGTTCTTCCGCAGGATCTGGATaGCCACCACCACCATCTCGGAGAGTGACGGGTCCGTCACGTTGT +
Preference number: 5 (lower is better)
Translates to: PPARRSLWGSSAGSG*PPPPSRRVTGPSRC
Trigger: ACAACGTGACGGACCCGTCACTCTCCGAGATGGTGGTGGTGGCCATCCAGATCCTGCGGAAGAACCCCAAAGGCTTCTTCTTGCTGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS CCA 90 bp GCCCGTGGTCAATTCTGCCTCCTTCCACCAGCAAGAAGAAGCCTTTaGGGTTCTTCCGCAGGATCTGGATGGCCACCACCACCATCTCGG +
Preference number: 5 (lower is better)
Translates to: ARGQFCLLPPARRSL*GSSAGSGWPPPPSR
Trigger: CCGAGATGGTGGTGGTGGCCATCCAGATCCTGCGGAAGAACCCCAAAGGCTTCTTCTTGCTGGTGGAAGGAGGCAGAATTGACCACGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CAA 90 bp GGCAGACTTTGGTTTCTTGGGTCCCCTTTCTTGCAGTTGCAGAGGCTGAGGAGGTTCCCCTGGGTGGTGTaGCACCGGGAACGCTCAGTG +
Preference number: 5 (lower is better)
Translates to: GRLWFLGSPFLQLQRLRRFPWVV*HRERSV
Trigger: CACTGAGCGTTCCCGGTGCAACACCACCCAGGGGAA...CCTCCTCAGCCTCTGCAACTGCAAGAAAGGGGACCCAAGAAACCAAAGTCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CAA 90 bp CGAGGTGGGCGGCAGACTTTGGTTTCTTGGGTCCCCTTTCTTGCAGTTGCAGAGTCAGGGGGCATCTCGTaGTCTGAGTACCAGTCCCGG +
Preference number: 5 (lower is better)
Translates to: RGGRQTLVSWVPFLAVAESGGIS*SEYQSR
Trigger: CCGGGACTGGTACTCAGACAACGAGATGCCCCCTGA...CTCTGCAACTGCAAGAAAGGGGACCCAAGAAACCAAAGTCTGCCGCCCACCTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CAA 90 bp TGTACTCTCTGCCTGCCCAAGAGAAATCTACCCTGTTGGCCAAAGGGCAGCGGGTCAGGGGGCATCTCGTaGTCTGAGTACCAGTCCCGG +
Preference number: 5 (lower is better)
Translates to: CTLCLPKRNLPCWPKGSGSGGIS*SEYQSR
Trigger: CCGGGACTGGTACTCAGACAACGAGATGCCCCCTGA...CCCGCTGCCCTTTGGCCAACAGGGTAGATTTCTCTTGGGCAGGCAGAGAGTACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CAA 90 bp TGCCCAAGAGAAATCTACCCTGTTGGCCAAAGGGCAGCGGGGAGGGAGCAAAGGAGGCCAGAAGTGGGTTaGGCCCTTGGGGAAGATTCC +
Preference number: 5 (lower is better)
Translates to: CPREIYPVGQRAAGREQRRPEVG*ALGEDS
Trigger: GGAATCTTCCCCAAGGGCCAAACCCACTTCTGGCCT...CCTTTGCTCCCTCCCCGCTGCCCTTTGGCCAACAGGGTAGATTTCTCTTGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CAA 90 bp AGGGGAGCGAGGTGGGCGGCAGACTTTGGTTTCTTGGGTCCCCTTTCTTGCAGTAGGCCAGAAGTGGGTTaGGCCCTTGGGGAAGATTCC +
Preference number: 5 (lower is better)
Translates to: RGARWAADFGFLGPLSCSRPEVG*ALGEDS
Trigger: GGAATCTTCCCCAAGGGCCAAACCCACTTCTGGCCT...ACTGCAAGAAAGGGGACCCAAGAAACCAAAGTCTGCCGCCCACCTCGCTCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CAA 90 bp TGCCCAAGAGAAATCTACCCTGTTGGCCAAAGGGCAGCGGGGAGGGAGCAAAGGGAGAAATCTACCCTGTaGGCCAAAGGGCAGCGGGGA +
Preference number: 5 (lower is better)
Translates to: CPREIYPVGQRAAGREQREKSTL*AKGQRG
Trigger: TCCCCGCTGCCCTTTGGCCAACAGGGTAGATTTCTC...CCTTTGCTCCCTCCCCGCTGCCCTTTGGCCAACAGGGTAGATTTCTCTTGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS TCA 90 bp GTTCTTCCGCAGGATCTGGATGGCCACCACCACCATCTCGGAGAGTaGCGGGTCCGTCACGTTGTTCCTGTTCAGCTCGTACTGCATGTC +
Preference number: 5 (lower is better)
Translates to: VLPQDLDGHHHHLGE*RVRHVVPVQLVLHV
Trigger: GACATGCAGTACGAGCTGAACAGGAACAACGTGACGGACCCGTCACTCTCCGAGATGGTGGTGGTGGCCATCCAGATCCTGCGGAAGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS CCA 90 bp TTATCCCTGGAGCCCAGAGATGCAATCGACGTGGGTGGGAGGGGGTaGGCTGGCAGTGGTCAGATGTTAACTGATGTTCCAATCCTGCGC +
Preference number: 5 (lower is better)
Translates to: LSLEPRDAIDVGGRG*AGSGQMLTDVPILR
Trigger: GCGCAGGATTGGAACATCAGTTAACATCTGACCACTGCCAGCCCACCCCCTCCCACCCACGTCGATTGCATCTCTGGGCTCCAGGGATAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374840.8
CDS-3UTR CAA 90 bp GGCTGGAGGCCAGAAGTGGGTTTGGCCCTTGGGGAAGATTCCAGAGGGGAGCGATGGTCTCGCCAGTACTaGGGGTCTTTCTCTTTCTCT +
Preference number: 5 (lower is better)
Translates to: GWRPEVGLALGEDSRGERWSRQY*GSFSFS
Trigger: AGAGAAAGAGAAAGACCCCAAGTACTGGCGAGACCA...TCGCTCCCCTCTGGAATCTTCCCCAAGGGCCAAACCCACTTCTGGCCTCCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CAA 90 bp AAACAGGAGAGTCGCTTCAGAGAGGAGCTGGCGTGTGTGTTCAGAGCCCAGGAGTTGGTGTTGTACGTCTaGGAGAGGGCCACGAAGGGG +
Preference number: 5 (lower is better)
Translates to: KQESRFREELACVFRAQELVLYV*ERATKG
Trigger: CCCCTTCGTGGCCCTCTCCAAGACGTACAACACCAA...CTCCTGGGCTCTGAACACACACGCCAGCTCCTCTCTGAAGCGACTCTCCTGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374840.8
CDS-3UTR CAA 90 bp TGTACTCTCTGCCTGCCCAAGAGAAATCTACCCTGTTGGCCAAAGGGCAGCGGGACCTGGGCATTGGTGTaGTACGTCTTGGAGAGGGCC +
Preference number: 5 (lower is better)
Translates to: CTLCLPKRNLPCWPKGSGTWALV*YVLERA
Trigger: GGCCCTCTCCAAGACGTACAACACCAATGCCCAGGT...CCCGCTGCCCTTTGGCCAACAGGGTAGATTTCTCTTGGGCAGGCAGAGAGTACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000540617.5
CDS-3UTR CAA 90 bp GATCCAGAATGTTCCACGGAGGCTTCAGGGCCTCTGGGTCTGGAGAAATACGTTGATTTCCCAGCGTCCTaGGCCCAGCGCAGGATGGAG +
Preference number: 5 (lower is better)
Translates to: DPECSTEASGPLGLEKYVDFPAS*AQRRME
Trigger: CTCCATCCTGCGCTGGGCCAAGGACGCTGGGAAATC...AACGTATTTCTCCAGACCCAGAGGCCCTGAAGCCTCCGTGGAACATTCTGGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CAA 90 bp CGAGGTGGGCGGCAGACTTTGGTTTCTTGGGTCCCCTTTCTTGCAGTTGCAGAGGACGGGTCCGTCACGTaGTTCCTGTTCAGCTCGTAC +
Preference number: 5 (lower is better)
Translates to: RGGRQTLVSWVPFLAVAEDGSVT*FLFSSY
Trigger: GTACGAGCTGAACAGGAACAACGTGACGGACCCGTC...CTCTGCAACTGCAAGAAAGGGGACCCAAGAAACCAAAGTCTGCCGCCCACCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CAA 90 bp GCAAGGCCTTGTCCTGAGGAGAAAGACCTCAACTCCCCTGAAGGAGGGCTGGGCAGCAAGAAGAAGCCTTaGGGGTTCTTCCGCAGGATC +
Preference number: 5 (lower is better)
Translates to: ARPCPEEKDLNSPEGGLGSKKKP*GFFRRI
Trigger: GATCCTGCGGAAGAACCCCAAAGGCTTCTTCTTGCT...GCCCAGCCCTCCTTCAGGGGAGTTGAGGTCTTTCTCCTCAGGACAAGGCCTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CAA 90 bp TACTCTCTGCCTGCCCAAGAGAAATCTACCCTGTTGGCCAAAGGGCAGCGGGGACTTGGGTCCCCTTTCTaGCAGTTGCAGAGGCTGAGG +
Preference number: 5 (lower is better)
Translates to: YSLPAQEKSTLLAKGQRGLGSPF*QLQRLR
Trigger: CCTCAGCCTCTGCAACTGCAAGAAAGGGGACCCAAG...TCCCCGCTGCCCTTTGGCCAACAGGGTAGATTTCTCTTGGGCAGGCAGAGAGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CAA 90 bp AGGGTCAGATCCAGAATGTTCCACGGAGGCTTCAGGGCCTCTGGGTCTGGAGAACTTGGGTCCCCTTTCTaGCAGTTGCAGAGGCTGAGG +
Preference number: 5 (lower is better)
Translates to: RVRSRMFHGGFRASGSGELGSPF*QLQRLR
Trigger: CCTCAGCCTCTGCAACTGCAAGAAAGGGGACCCAAG...TTCTCCAGACCCAGAGGCCCTGAAGCCTCCGTGGAACATTCTGGATCTGACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CAA 90 bp CGAGGTGGGCGGCAGACTTTGGTTTCTTGGGTCCCCTTTCTTGCAGTTGCAGAGGGTGGGCGGCAGACTTaGGTTTCTTGGGTCCCCTTT +
Preference number: 5 (lower is better)
Translates to: RGGRQTLVSWVPFLAVAEGGRQT*VSWVPF
Trigger: AAAGGGGACCCAAGAAACCAAAGTCTGCCGCCCACC...CTCTGCAACTGCAAGAAAGGGGACCCAAGAAACCAAAGTCTGCCGCCCACCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CAA 90 bp CGAGGTGGGCGGCAGACTTTGGTTTCTTGGGTCCCCTTTCTTGCAGTTGCAGAGGAGAAATCTACCCTGTaGGCCAAAGGGCAGCGGGGA +
Preference number: 5 (lower is better)
Translates to: RGGRQTLVSWVPFLAVAEEKSTL*AKGQRG
Trigger: TCCCCGCTGCCCTTTGGCCAACAGGGTAGATTTCTC...CTCTGCAACTGCAAGAAAGGGGACCCAAGAAACCAAAGTCTGCCGCCCACCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CAA 90 bp GGCGGCAGACTTTGGTTTCTTGGGTCCCCTTTCTTGCAGTTGCAGAGGCTGAGGGAGAAATCTACCCTGTaGGCCAAAGGGCAGCGGGGA +
Preference number: 5 (lower is better)
Translates to: GGRLWFLGSPFLQLQRLREKSTL*AKGQRG
Trigger: TCCCCGCTGCCCTTTGGCCAACAGGGTAGATTTCTC...CCTCAGCCTCTGCAACTGCAAGAAAGGGGACCCAAGAAACCAAAGTCTGCCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CAA 90 bp GCCCAAGAGAAATCTACCCTGTTGGCCAAAGGGCAGCGGGGAGGGAGCAAAGGCACCTGGGCATTGGTGTaGTACGTCATCTCCCAGGAA +
Preference number: 5 (lower is better)
Translates to: AQEKSTLLAKGQRGGSKGTWALV*YVISQE
Trigger: TTCCTGGGAGATGACGTACAACACCAATGCCCAGGT...GCCTTTGCTCCCTCCCCGCTGCCCTTTGGCCAACAGGGTAGATTTCTCTTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539907.5
CDS-3UTR CAA 90 bp GGCAGACTTTGGTTTCTTGGGTCCCCTTTCTTGCAGTTGCAGAGGCTGAGGAGGCAGTGTCTCTTGCGCTaGGTCTCGCCAGTACTTGGG +
Preference number: 5 (lower is better)
Translates to: GRLWFLGSPFLQLQRLRRQCLLR*VSPVLG
Trigger: CCCAAGTACTGGCGAGACCAAGCGCAAGAGACACTG...CCTCCTCAGCCTCTGCAACTGCAAGAAAGGGGACCCAAGAAACCAAAGTCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CAA 90 bp TCAGATCCAGAATGTTCCACGGAGGCTTCAGGGCCTCTGGGTCTGGAGAAATACGCCACGAAGGGGAACTaGTCCATCTCCAGCCTGGTC +
Preference number: 5 (lower is better)
Translates to: SDPECSTEASGPLGLEKYATKGN*SISSLV
Trigger: GACCAGGCTGGAGATGGACAAGTTCCCCTTCGTGGC...GTATTTCTCCAGACCCAGAGGCCCTGAAGCCTCCGTGGAACATTCTGGATCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000540617.5
CDS-3UTR CAA 90 bp GGCTGGAGGCCAGAAGTGGGTTTGGCCCTTGGGGAAGATTCCAGAGGGGAGCGATGCTTGTATCTCGGTTaGAAGCTCTTCCAGGTGTCA +
Preference number: 5 (lower is better)
Translates to: GWRPEVGLALGEDSRGERCLYLG*KLFQVS
Trigger: TGACACCTGGAAGAGCTTCAAACCGAGATACAAGCA...TCGCTCCCCTCTGGAATCTTCCCCAAGGGCCAAACCCACTTCTGGCCTCCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CAA 90 bp GGCAGACTTTGGTTTCTTGGGTCCCCTTTCTTGCAGTTGCAGAGGCTGAGGAGGCTTGGGTCCCCTTTCTaGCAGTTGCAGAGGCTGAGG +
Preference number: 5 (lower is better)
Translates to: GRLWFLGSPFLQLQRLRRLGSPF*QLQRLR
Trigger: CCTCAGCCTCTGCAACTGCAAGAAAGGGGACCCAAG...CCTCCTCAGCCTCTGCAACTGCAAGAAAGGGGACCCAAGAAACCAAAGTCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CAA 90 bp CAGATCCAGAATGTTCCACGGAGGCTTCAGGGCCTCTGGGTCTGGAGAAATACGGGTGGGCGGCAGACTTaGGTTTCTTGGGTCCCCTTT +
Preference number: 5 (lower is better)
Translates to: QIQNVPRRLQGLWVWRNTGGRQT*VSWVPF
Trigger: AAAGGGGACCCAAGAAACCAAAGTCTGCCGCCCACC...CGTATTTCTCCAGACCCAGAGGCCCTGAAGCCTCCGTGGAACATTCTGGATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CAA 90 bp TTGGTTTCTTGGGTCCCCTTTCTTGCAGTTGCAGAGGCTGAGGAGGCCCCCACCTGGTCTCGCCAGTACTaGGGGTCTTTCTCTTTCTCT +
Preference number: 5 (lower is better)
Translates to: LVSWVPFLAVAEAEEAPTWSRQY*GSFSFS
Trigger: AGAGAAAGAGAAAGACCCCAAGTACTGGCGAGACCA...GGTGGGGGCCTCCTCAGCCTCTGCAACTGCAAGAAAGGGGACCCAAGAAACCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CAA 90 bp GGAGGGTCAGATCCAGAATGTTCCACGGAGGCTTCAGGGCCTCTGGGTCTGGAGATATTTCAGTGTCTCTaGCGCTTGGTCTCGCCAGTA +
Preference number: 5 (lower is better)
Translates to: GGSDPECSTEASGPLGLEIFQCL*RLVSPV
Trigger: TACTGGCGAGACCAAGCGCAAGAGACACTGAAATAT...CTCCAGACCCAGAGGCCCTGAAGCCTCCGTGGAACATTCTGGATCTGACCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CAA 90 bp TTGGCCCTTGGGGAAGATTCCAGAGGGGAGCGAGGTGGGCGGCAGACTTTGGTTATGAAGTGGGAGTGCTaGTATCTCGGTTTGAAGCTC +
Preference number: 5 (lower is better)
Translates to: LALGEDSRGERGGRQTLVMKWEC*YLGLKL
Trigger: GAGCTTCAAACCGAGATACAAGCACTCCCACTTCAT...AACCAAAGTCTGCCGCCCACCTCGCTCCCCTCTGGAATCTTCCCCAAGGGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CAA 90 bp TCAGATCCAGAATGTTCCACGGAGGCTTCAGGGCCTCTGGGTCTGGAGAAATACGACGGGTCCGTCACGTaGTTCCTGTTCAGCTCGTAC +
Preference number: 5 (lower is better)
Translates to: SDPECSTEASGPLGLEKYDGSVT*FLFSSY
Trigger: GTACGAGCTGAACAGGAACAACGTGACGGACCCGTC...GTATTTCTCCAGACCCAGAGGCCCTGAAGCCTCCGTGGAACATTCTGGATCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS CCA 90 bp TCTTCCAGGTGTCAACGAGGTCCAGGCCGTCCAGCCTCGTGCCCCTaGCTTTCTCGTCACTCTCATACTCCACATCAGTTTTATTCTTGG +
Preference number: 5 (lower is better)
Translates to: SSRCQRGPGRPASCP*LSRHSHTPHQFYSW
Trigger: CCAAGAATAAAACTGATGTGGAGTATGAGAGTGACGAGAAAGCCAGGGGCACGAGGCTGGACGGCCTGGACCTCGTTGACACCTGGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS CCA 90 bp TTATCCCTGGAGCCCAGAGATGCAATCGACGTGGGTGGGAGGGGGTaGGCTGGCAGTGGTCAGATGTTAACTGATGTTCCAATCCTCTTT +
Preference number: 5 (lower is better)
Translates to: LSLEPRDAIDVGGRG*AGSGQMLTDVPILF
Trigger: AAAGAGGATTGGAACATCAGTTAACATCTGACCACTGCCAGCCCACCCCCTCCCACCCACGTCGATTGCATCTCTGGGCTCCAGGGATAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374832.5
CDS-3UTR CAA 90 bp AGGGGAGCGAGGTGGGCGGCAGACTTTGGTTTCTTGGGTCCCCTTTCTTGCAGTATATTTCAGTGTCTCTaGCGCTTGGTCTCGCCAGTA +
Preference number: 5 (lower is better)
Translates to: RGARWAADFGFLGPLSCSIFQCL*RLVSPV
Trigger: TACTGGCGAGACCAAGCGCAAGAGACACTGAAATAT...ACTGCAAGAAAGGGGACCCAAGAAACCAAAGTCTGCCGCCCACCTCGCTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CAA 90 bp GGCAGACTTTGGTTTCTTGGGTCCCCTTTCTTGCAGTTGCAGAGGCTGAGGAGGAGCAAGAAGAAGCCTTaGGGGTTCTTCCGCAGGATC +
Preference number: 5 (lower is better)
Translates to: GRLWFLGSPFLQLQRLRRSKKKP*GFFRRI
Trigger: GATCCTGCGGAAGAACCCCAAAGGCTTCTTCTTGCT...CCTCCTCAGCCTCTGCAACTGCAAGAAAGGGGACCCAAGAAACCAAAGTCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CAA 90 bp TTCCACGGAGGCTTCAGGGCCTCTGGGTCTGGAGAAATACGTTCGCTAGAAAAACTTGGGTCCCCTTTCTaGCAGTTGCAGAGGCTGAGG +
Preference number: 5 (lower is better)
Translates to: FHGGFRASGSGEIRSLEKLGSPF*QLQRLR
Trigger: CCTCAGCCTCTGCAACTGCAAGAAAGGGGACCCAAG...TTTTTCTAGCGAACGTATTTCTCCAGACCCAGAGGCCCTGAAGCCTCCGTGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CAA 90 bp CCACGGAGGCTTCAGGGCCTCTGGGTCTGGAGAAATACGTTCGCTAGAAAAATAAGGCCAGAAGTGGGTTaGGCCCTTGGGGAAGATTCC +
Preference number: 5 (lower is better)
Translates to: PRRLQGLWVWRNTFARKIRPEVG*ALGEDS
Trigger: GGAATCTTCCCCAAGGGCCAAACCCACTTCTGGCCT...TATTTTTCTAGCGAACGTATTTCTCCAGACCCAGAGGCCCTGAAGCCTCCGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CAA 90 bp GGCAGACTTTGGTTTCTTGGGTCCCCTTTCTTGCAGTTGCAGAGGCTGAGGAGGTGGTCTCGCCAGTACTaGGGGTCTTTCTCTTTCTCT +
Preference number: 5 (lower is better)
Translates to: GRLWFLGSPFLQLQRLRRWSRQY*GSFSFS
Trigger: AGAGAAAGAGAAAGACCCCAAGTACTGGCGAGACCA...CCTCCTCAGCCTCTGCAACTGCAAGAAAGGGGACCCAAGAAACCAAAGTCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CAA 90 bp GCGAGGTGGGCGGCAGACTTTGGTTTCTTGGGTCCCCTTTCTTGCAGTTGCAGAATATTTCAGTGTCTCTaGCGCTTGGTCTCGCCAGTA +
Preference number: 5 (lower is better)
Translates to: ARWAADFGFLGPLSCSCRIFQCL*RLVSPV
Trigger: TACTGGCGAGACCAAGCGCAAGAGACACTGAAATAT...TCTGCAACTGCAAGAAAGGGGACCCAAGAAACCAAAGTCTGCCGCCCACCTCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CAA 90 bp TTCCACGGAGGCTTCAGGGCCTCTGGGTCTGGAGAAATACGTTCGCTAGAAAAATCAGGGACCTGGGCATaGGTGTTGTACGTCTTGGAG +
Preference number: 5 (lower is better)
Translates to: FHGGFRASGSGEIRSLEKSGTWA*VLYVLE
Trigger: CTCCAAGACGTACAACACCAATGCCCAGGTCCCTGA...TTTTTCTAGCGAACGTATTTCTCCAGACCCAGAGGCCCTGAAGCCTCCGTGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000540617.5
CDS-3UTR CAA 90 bp AGTGAGCAAGGCCTTGTCCTGAGGAGAAAGACCTCAACTCCCCTGAAGGAGGGCATGAAGTGGGAGTGCTaGTATCTCGGTTTGAAGCTC +
Preference number: 5 (lower is better)
Translates to: SEQGLVLRRKTSTPLKEGMKWEC*YLGLKL
Trigger: GAGCTTCAAACCGAGATACAAGCACTCCCACTTCAT...GCCCTCCTTCAGGGGAGTTGAGGTCTTTCTCCTCAGGACAAGGCCTTGCTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CAA 90 bp TCTGTACTCTCTGCCTGCCCAAGAGAAATCTACCCTGTTGGCCAAAGGGCAGCGTGCTTGTATCTCGGTTaGAAGCTCTTCCAGGTGTCA +
Preference number: 5 (lower is better)
Translates to: SVLSACPREIYPVGQRAACLYLG*KLFQVS
Trigger: TGACACCTGGAAGAGCTTCAAACCGAGATACAAGCA...CGCTGCCCTTTGGCCAACAGGGTAGATTTCTCTTGGGCAGGCAGAGAGTACAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CAA 90 bp TTCCACGGAGGCTTCAGGGCCTCTGGGTCTGGAGAAATACGTTCGCTAGAAAAAAGCAAGAAGAAGCCTTaGGGGTTCTTCCGCAGGATC +
Preference number: 5 (lower is better)
Translates to: FHGGFRASGSGEIRSLEKSKKKP*GFFRRI
Trigger: GATCCTGCGGAAGAACCCCAAAGGCTTCTTCTTGCT...TTTTTCTAGCGAACGTATTTCTCCAGACCCAGAGGCCCTGAAGCCTCCGTGGAA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS TCA 90 bp CCCAGGAACATGATGACATTCTTAGCCACGTTGGTGTTGAGCTTCTaGAGCTCCAGGGCATATTTCAGTGTCTCTTGCGCTTGGTCTCGC +
Preference number: 5 (lower is better)
Translates to: PRNMMTFLATLVLSF*SSRAYFSVSCAWSR
Trigger: GCGAGACCAAGCGCAAGAGACACTGAAATATGCCCTGGAGCTTCAGAAGCTCAACACCAACGTGGCTAAGAATGTCATCATGTTCCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000468526.1
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CAA 90 bp CCACGGAGGCTTCAGGGCCTCTGGGTCTGGAGAAATACGTTCGCTAGAAAAATATGGTCTCGCCAGTACTaGGGGTCTTTCTCTTTCTCT +
Preference number: 5 (lower is better)
Translates to: PRRLQGLWVWRNTFARKIWSRQY*GSFSFS
Trigger: AGAGAAAGAGAAAGACCCCAAGTACTGGCGAGACCA...TATTTTTCTAGCGAACGTATTTCTCCAGACCCAGAGGCCCTGAAGCCTCCGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CAA 90 bp CCACGGAGGCTTCAGGGCCTCTGGGTCTGGAGAAATACGTTCGCTAGAAAAATAATGAAGTGGGAGTGCTaGTATCTCGGTTTGAAGCTC +
Preference number: 5 (lower is better)
Translates to: PRRLQGLWVWRNTFARKIMKWEC*YLGLKL
Trigger: GAGCTTCAAACCGAGATACAAGCACTCCCACTTCAT...TATTTTTCTAGCGAACGTATTTCTCCAGACCCAGAGGCCCTGAAGCCTCCGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CAA 90 bp GTCTGGAGAAATACGTTCGCTAGAAAAATAAGAGGCTTTGAGAATGTCTGCAGTGCCACGAAGGGGAACTaGTCCATCTCCAGCCTGGTC +
Preference number: 5 (lower is better)
Translates to: VWRNTFARKIRGFENVCSATKGN*SISSLV
Trigger: GACCAGGCTGGAGATGGACAAGTTCCCCTTCGTGGC...ACTGCAGACATTCTCAAAGCCTCTTATTTTTCTAGCGAACGTATTTCTCCAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000540617.5
CDS-3UTR CAA 90 bp GTCTGGAGAAATACGTTCGCTAGAAAAATAAGAGGCTTTGAGAATGTCTGCAGTGACGGGTCCGTCACGTaGTTCCTGTTCAGCTCGTAC +
Preference number: 5 (lower is better)
Translates to: VWRNTFARKIRGFENVCSDGSVT*FLFSSY
Trigger: GTACGAGCTGAACAGGAACAACGTGACGGACCCGTC...ACTGCAGACATTCTCAAAGCCTCTTATTTTTCTAGCGAACGTATTTCTCCAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS-3UTR CAA 90 bp ACGTTCGCTAGAAAAATAAGAGGCTTTGAGAATGTCTGCAGTCTGTACTCTCTGATATTTCAGTGTCTCTaGCGCTTGGTCTCGCCAGTA +
Preference number: 5 (lower is better)
Translates to: TFARKIRGFENVCSLYSLIFQCL*RLVSPV
Trigger: TACTGGCGAGACCAAGCGCAAGAGACACTGAAATAT...CAGAGAGTACAGACTGCAGACATTCTCAAAGCCTCTTATTTTTCTAGCGAACGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS GCA 72 bp CAGGGGGTAGAGGGCCAGCGCGAGCAGCAGGGGGCCTaGAGCAAGGCTGCCTGCCGAGCTGGCAGGAGCACA +
Preference number: 6 (lower is better)
Translates to: QGVEGQREQQGA*SKAACRAGRST
Trigger: TGTGCTCCTGCCAGCTCGGCAGGCAGCCTTGCTGCAGGCCCCCTGCTGCTCGCGCTGGCCCTCTACCCCCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000374829.2
ENST00000374830.2
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS CCA 72 bp GCAGCAGGGGGCCTGCAGCAAGGCTGCCTGCCGAGCTaGCAGGAGCACAGTGGCCGAGGTTGGCCCCGATGC +
Preference number: 6 (lower is better)
Translates to: AAGGLQQGCLPS*QEHSGRGWPRC
Trigger: GCATCGGGGCCAACCTCGGCCACTGTGCTCCTGCCAGCTCGGCAGGCAGCCTTGCTGCAGGCCCCCTGCTGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374829.2
ENST00000374830.2
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS CCA 72 bp AGAGCACTGGCGAGGGTCCGTCCAGGCACAAGCGCGTaGGAGCACGGAGCCAGGATAGCGGGCGCGGAGTGG +
Preference number: 6 (lower is better)
Translates to: RALARVRPGTSA*EHGARIAGAEW
Trigger: CCACTCCGCGCCCGCTATCCTGGCTCCGTGCTCCCACGCGCTTGTGCCTGGACGGACCCTCGCCAGTGCTCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374840.8
ENST00000468526.1
ENST00000539907.5
ENST00000540617.5
CDS CCA 72 bp GCAGCAAGGCTGCCTGCCGAGCTGGCAGGAGCACAGTaGCCGAGGTTGGCCCCGATGCAGGCTGCATACGCC +
Preference number: 6 (lower is better)
Translates to: AARLPAELAGAQ*PRLAPMQAAYA
Trigger: GGCGTATGCAGCCTGCATCGGGGCCAACCTCGGCCACTGTGCTCCTGCCAGCTCGGCAGGCAGCCTTGCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374829.2
ENST00000374830.2
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS CAA 90 bp TTGGCCCAGCGCAGGATGGAGGTGACCTCGTTCCCCTGGGTGGTGTaGCACCGGGAACGCTCAGTGGCTGCGCTTACCCCCACGGTGCCC +
Preference number: 6 (lower is better)
Translates to: LAQRRMEVTSFPWVV*HRERSVAALTPTVP
Trigger: GGGCACCGTGGGGGTAAGCGCAGCCACTGAGCGTTCCCGGTGCAACACCACCCAGGGGAACGAGGTCACCTCCATCCTGCGCTGGGCCAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000468526.1
ENST00000539907.5
ENST00000540617.5
CDS CCA 72 bp CTGCCGTGTGGGAAGTTGGCATCTGTCACGGGCTTGTaGGTGCCCGGGCCCTGGGCCCTCAGAACAGGACGC +
Preference number: 6 (lower is better)
Translates to: LPCGKLASVTGL*VPGPWALRTGR
Trigger: GCGTCCTGTTCTGAGGGCCCAGGGCCCGGGCACCCACAAGCCCGTGACAGATGCCAACTTCCCACACGGCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374829.2
ENST00000374830.2
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS TCA 72 bp GCCCTGGCTCAAGGCCTCAGGGGGCATCTCGTTGTCTaGGTACCAGTCCCGGTCAGCCGAGTGGGCGTAGGC +
Preference number: 6 (lower is better)
Translates to: ALAQGLRGHLVV*VPVPVSRVGVG
Trigger: GCCTACGCCCACTCGGCTGACCGGGACTGGTACTCAGACAACGAGATGCCCCCTGAGGCCTTGAGCCAGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000468526.1
ENST00000539907.5
ENST00000540617.5
CDS GCA 72 bp ACCGGGAACGCTCAGTGGCTGCGCTTACCCCCACGGTaGCCTCATTGGCCTTCACCCCACACAGGTAGGCGG +
Preference number: 6 (lower is better)
Translates to: TGNAQWLRLPPR*PHWPSPHTGRR
Trigger: CCGCCTACCTGTGTGGGGTGAAGGCCAATGAGGGCACCGTGGGGGTAAGCGCAGCCACTGAGCGTTCCCGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000468526.1
ENST00000539907.5
ENST00000540617.5
CDS GCA 72 bp CCCCTGGGTGGTGTTGCACCGGGAACGCTCAGTGGCTaGGCTTACCCCCACGGTGCCCTCATTGGCCTTCAC +
Preference number: 6 (lower is better)
Translates to: PLGGVAPGTLSG*AYPHGALIGLH
Trigger: GTGAAGGCCAATGAGGGCACCGTGGGGGTAAGCGCAGCCACTGAGCGTTCCCGGTGCAACACCACCCAGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000468526.1
ENST00000539907.5
ENST00000540617.5
CDS GCA 72 bp CACGGTCAGAGTGTCTTCCGAGGAGGTCAAGCTGCCTaGCTGCCCGATGGCCCGGTCCATCTCCACCGCCTC +
Preference number: 6 (lower is better)
Translates to: HGQSVFRGGQAA*LPDGPVHLHRL
Trigger: GAGGCGGTGGAGATGGACCGGGCCATCGGGCAGGCAGGCAGCTTGACCTCCTCGGAAGACACTCTGACCGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374829.2
ENST00000374830.2
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS GCA 72 bp CGTGTGGGAAGTTGGCATCTGTCACGGGCTTGTGGGTaGCCGGGCCCTGGGCCCTCAGAACAGGACGCTCAG +
Preference number: 6 (lower is better)
Translates to: RVGSWHLSRACG*PGPGPSEQDAQ
Trigger: CTGAGCGTCCTGTTCTGAGGGCCCAGGGCCCGGGCACCCACAAGCCCGTGACAGATGCCAACTTCCCACACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374829.2
ENST00000374830.2
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS CCA 72 bp CGTTCCCCTGGGTGGTGTTGCACCGGGAACGCTCAGTaGCTGCGCTTACCCCCACGGTGCCCTCATTGGCCT +
Preference number: 6 (lower is better)
Translates to: RSPGWCCTGNAQ*LRLPPRCPHWP
Trigger: AGGCCAATGAGGGCACCGTGGGGGTAAGCGCAGCCACTGAGCGTTCCCGGTGCAACACCACCCAGGGGAACG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000468526.1
ENST00000539907.5
ENST00000540617.5
CDS CCA 72 bp TTGGCCCAGCGCAGGATGGAGGTGACCTCGTTCCCCTaGGTGGTGTTGCACCGGGAACGCTCAGTGGCTGCG +
Preference number: 6 (lower is better)
Translates to: LAQRRMEVTSFP*VVLHRERSVAA
Trigger: CGCAGCCACTGAGCGTTCCCGGTGCAACACCACCCAGGGGAACGAGGTCACCTCCATCCTGCGCTGGGCCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000468526.1
ENST00000539907.5
ENST00000540617.5
CDS CCA 72 bp TGTCTTCCGAGGAGGTCAAGCTGCCTGCCTGCCCGATaGCCCGGTCCATCTCCACCGCCTCATGCAGGGCCT +
Preference number: 6 (lower is better)
Translates to: CLPRRSSCLPAR*PGPSPPPHAGP
Trigger: AGGCCCTGCATGAGGCGGTGGAGATGGACCGGGCCATCGGGCAGGCAGGCAGCTTGACCTCCTCGGAAGACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374829.2
ENST00000374830.2
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS CAA 72 bp GCGGTGGCGGTGCCGGCACTGTCAGGGACCTGGGCATaGGTGTTGTACGTCTTGGAGAGGGCCACGAAGGGG +
Preference number: 6 (lower is better)
Translates to: AVAVPALSGTWA*VLYVLERATKG
Trigger: CCCCTTCGTGGCCCTCTCCAAGACGTACAACACCAATGCCCAGGTCCCTGACAGTGCCGGCACCGCCACCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000468526.1
ENST00000540617.5
CDS CAA 72 bp GCCAAGACCGCTGTGCTCGAGTGGGAACCCCGGGGTTaGGCAAGAAAGCAGCCAAGCTGGGCTGGCGGACGC +
Preference number: 6 (lower is better)
Translates to: AKTAVLEWEPRG*ARKQPSWAGGR
Trigger: GCGTCCGCCAGCCCAGCTTGGCTGCTTTCTTGCCAAACCCCGGGGTTCCCACTCGAGCACAGCGGTCTTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374829.2
CDS CAA 90 bp GCCCGTGGTCAATTCTGCCTCCACCGCTGGTTTCTGGCTGGCTCCTaGGCGTCAGAGGCCTGTTCGGGGCCAGGCCAAGACCGCTGTGCT +
Preference number: 6 (lower is better)
Translates to: ARGQFCLHRWFLAGS*ASEACSGPGQDRCA
Trigger: AGCACAGCGGTCTTGGCCTGGCCCCGAACAGGCCTCTGACGCCAAGGAGCCAGCCAGAAACCAGCGGTGGAGGCAGAATTGACCACGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374829.2
CDS GCA 72 bp GTCAGAGTGTCTTCCGAGGAGGTCAAGCTGCCTGCCTaGCCGATGGCCCGGTCCATCTCCACCGCCTCATGC +
Preference number: 6 (lower is better)
Translates to: VRVSSEEVKLPA*PMARSISTASC
Trigger: GCATGAGGCGGTGGAGATGGACCGGGCCATCGGGCAGGCAGGCAGCTTGACCTCCTCGGAAGACACTCTGAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374829.2
ENST00000374830.2
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS CCA 72 bp CGGTGGCGGTGCCGGCACTGTCAGGGACCTGGGCATTaGTGTTGTACGTCTTGGAGAGGGCCACGAAGGGGA +
Preference number: 6 (lower is better)
Translates to: RWRCRHCQGPGH*CCTSWRGPRRG
Trigger: TCCCCTTCGTGGCCCTCTCCAAGACGTACAACACCAATGCCCAGGTCCCTGACAGTGCCGGCACCGCCACCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000468526.1
ENST00000540617.5
CDS CCA 72 bp CCAAGACCGCTGTGCTCGAGTGGGAACCCCGGGGTTTaGCAAGAAAGCAGCCAAGCTGGGCTGGCGGACGCT +
Preference number: 6 (lower is better)
Translates to: PRPLCSSGNPGV*QESSQAGLADA
Trigger: AGCGTCCGCCAGCCCAGCTTGGCTGCTTTCTTGCCAAACCCCGGGGTTCCCACTCGAGCACAGCGGTCTTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374829.2
CDS CCA 72 bp CCGTGGTCAATTCTGCCTCCACCGCTGGTTTCTGGCTaGCTCCTTGGCGTCAGAGGCCTGTTCGGGGCCAGG +
Preference number: 6 (lower is better)
Translates to: PWSILPPPLVSG*LLGVRGLFGAR
Trigger: CCTGGCCCCGAACAGGCCTCTGACGCCAAGGAGCCAGCCAGAAACCAGCGGTGGAGGCAGAATTGACCACGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374829.2
CDS CCA 72 bp GTGCCCGTGGTCAATTCTGCCTCCACCGCTGGTTTCTaGCTGGCTCCTTGGCGTCAGAGGCCTGTTCGGGGC +
Preference number: 6 (lower is better)
Translates to: VPVVNSASTAGF*LAPWRQRPVRG
Trigger: GCCCCGAACAGGCCTCTGACGCCAAGGAGCCAGCCAGAAACCAGCGGTGGAGGCAGAATTGACCACGGGCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374829.2
CDS TCA 72 bp TGGTCTCCTCCCCAGGGTTGTGGTGGAGCTGACCCTTaGGGATGCGGGCAGCCGTCACTGTGGAGACACCCA +
Preference number: 6 (lower is better)
Translates to: WSPPQGCGGADP*GCGQPSLWRHP
Trigger: TGGGTGTCTCCACAGTGACGGCTGCCCGCATCCTCAAGGGTCAGCTCCACCACAACCCTGGGGAGGAGACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000468526.1
ENST00000540617.5
CDS TCA 72 bp ATTTCCCAGCGTCCTTGGCCCAGCGCAGGATGGAGGTaGCCTCGTTCCCCTGGGTGGTGTTGCACCGGGAAC +
Preference number: 6 (lower is better)
Translates to: ISQRPWPSAGWR*PRSPGWCCTGN
Trigger: GTTCCCGGTGCAACACCACCCAGGGGAACGAGGTCACCTCCATCCTGCGCTGGGCCAAGGACGCTGGGAAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000468526.1
ENST00000539907.5
ENST00000540617.5
CDS GCA 72 bp AGGAGCACAGTGGCCGAGGTTGGCCCCGATGCAGGCTaGATACGCCATCACGTGGGGGACGTAGTTCTGCTC +
Preference number: 6 (lower is better)
Translates to: RSTVAEVGPDAG*IRHHVGDVVLL
Trigger: GAGCAGAACTACGTCCCCCACGTGATGGCGTATGCAGCCTGCATCGGGGCCAACCTCGGCCACTGTGCTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374829.2
ENST00000374830.2
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS CCA 72 bp GAAAGCAGCCAAGCTGGGCTGGCGGACGCTCACCTCTaGAAGGCGGAGGCGCTGAGCATGTGTGTATGCGTG +
Preference number: 6 (lower is better)
Translates to: ESSQAGLADAHL*KAEALSMCVCV
Trigger: CACGCATACACACATGCTCAGCGCCTCCGCCTTCCAGAGGTGAGCGTCCGCCAGCCCAGCTTGGCTGCTTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374829.2
CDS CCA 72 bp AATTCTGCCTCCACCGCTGGTTTCTGGCTGGCTCCTTaGCGTCAGAGGCCTGTTCGGGGCCAGGCCAAGACC +
Preference number: 6 (lower is better)
Translates to: NSASTAGFWLAP*RQRPVRGQAKT
Trigger: GGTCTTGGCCTGGCCCCGAACAGGCCTCTGACGCCAAGGAGCCAGCCAGAAACCAGCGGTGGAGGCAGAATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374829.2
CDS CAA 72 bp CAATTCTGCCTCCACCGCTGGTTTCTGGCTGGCTCCTaGGCGTCAGAGGCCTGTTCGGGGCCAGGCCAAGAC +
Preference number: 6 (lower is better)
Translates to: QFCLHRWFLAGS*ASEACSGPGQD
Trigger: GTCTTGGCCTGGCCCCGAACAGGCCTCTGACGCCAAGGAGCCAGCCAGAAACCAGCGGTGGAGGCAGAATTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374829.2
CDS CCA 72 bp AGGCGGCGCTGGGGGTGGCATGGTTCACTCTCGTGGTaGTCACAATGCCCACAGATTTCCCAGCGTCCTTGG +
Preference number: 6 (lower is better)
Translates to: RRRWGWHGSLSW*SQCPQISQRPW
Trigger: CCAAGGACGCTGGGAAATCTGTGGGCATTGTGACCACCACGAGAGTGAACCATGCCACCCCCAGCGCCGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000468526.1
ENST00000539907.5
ENST00000540617.5
CDS CCA 72 bp CGTAGGCGGCGCTGGGGGTGGCATGGTTCACTCTCGTaGTGGTCACAATGCCCACAGATTTCCCAGCGTCCT +
Preference number: 6 (lower is better)
Translates to: RRRRWGWHGSLS*WSQCPQISQRP
Trigger: AGGACGCTGGGAAATCTGTGGGCATTGTGACCACCACGAGAGTGAACCATGCCACCCCCAGCGCCGCCTACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000468526.1
ENST00000539907.5
ENST00000540617.5
CDS GCA 72 bp TGGGGGTGGCATGGTTCACTCTCGTGGTGGTCACAATaGCCACAGATTTCCCAGCGTCCTTGGCCCAGCGCA +
Preference number: 6 (lower is better)
Translates to: WGWHGSLSWWSQ*PQISQRPWPSA
Trigger: TGCGCTGGGCCAAGGACGCTGGGAAATCTGTGGGCATTGTGACCACCACGAGAGTGAACCATGCCACCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000468526.1
ENST00000539907.5
ENST00000540617.5
CDS CAA 72 bp GCGGTGGCGGTGCCGGCACTGTCAGGGACCTGGGCATaGGTGTTGTACGTCATCTCCCAGGAACATGATGAC +
Preference number: 6 (lower is better)
Translates to: AVAVPALSGTWA*VLYVISQEHDD
Trigger: GTCATCATGTTCCTGGGAGATGACGTACAACACCAATGCCCAGGTCCCTGACAGTGCCGGCACCGCCACCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539907.5
CDS TCA 72 bp TGGGAGGGGGTGGGCTGGCAGTGGTCAGATGTTAACTaGTGTTCCAATCCTGCGCAGAGCACTGGCGAGGGT +
Preference number: 6 (lower is better)
Translates to: WEGVGWQWSDVN*CSNPAQSTGEG
Trigger: ACCCTCGCCAGTGCTCTGCGCAGGATTGGAACATCAGTTAACATCTGACCACTGCCAGCCCACCCCCTCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374840.8
CDS CCA 72 bp CGGTGGCGGTGCCGGCACTGTCAGGGACCTGGGCATTaGTGTTGTACGTCATCTCCCAGGAACATGATGACA +
Preference number: 6 (lower is better)
Translates to: RWRCRHCQGPGH*CCTSSPRNMMT
Trigger: TGTCATCATGTTCCTGGGAGATGACGTACAACACCAATGCCCAGGTCCCTGACAGTGCCGGCACCGCCACCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539907.5
CDS CAA 72 bp ACCACCACCATCTCGGAGAGTGACGGGTCCGTCACGTaGTTCCTGTTCAGCTCGTACTGCATGTCCCCTGGC +
Preference number: 6 (lower is better)
Translates to: TTTISESDGSVT*FLFSSYCMSPG
Trigger: GCCAGGGGACATGCAGTACGAGCTGAACAGGAACAACGTGACGGACCCGTCACTCTCCGAGATGGTGGTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS CAA 90 bp TGGATGGCCACCACCACCATCTCGGAGAGTGACGGGTCCGTCACGTaGTTCCTGTTCAGCTCGTACTGCATGTCCCCTGGCTCGAAGAGA +
Preference number: 6 (lower is better)
Translates to: WMATTTISESDGSVT*FLFSSYCMSPGSKR
Trigger: TCTCTTCGAGCCAGGGGACATGCAGTACGAGCTGAACAGGAACAACGTGACGGACCCGTCACTCTCCGAGATGGTGGTGGTGGCCATCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS TCA 72 bp CCTTGTAGCCAGGCCCATTGCCATACAGGATGGCAGTaGAGGGCTTCTTGTCTGTGTCACTCAGCATGGGGG +
Preference number: 6 (lower is better)
Translates to: PCSQAHCHTGWQ*RASCLCHSAWG
Trigger: CCCCCATGCTGAGTGACACAGACAAGAAGCCCTTCACTGCCATCCTGTATGGCAATGGGCCTGGCTACAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374829.2
ENST00000374830.2
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS CCA 72 bp TGTCAACGAGGTCCAGGCCGTCCAGCCTCGTGCCCCTaGCTTTCTCGTCACTCTCATACTCCACATCAGTTT +
Preference number: 6 (lower is better)
Translates to: CQRGPGRPASCP*LSRHSHTPHQF
Trigger: AAACTGATGTGGAGTATGAGAGTGACGAGAAAGCCAGGGGCACGAGGCTGGACGGCCTGGACCTCGTTGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
CDS GCA 72 bp CACCTCTGGAAGGCGGAGGCGCTGAGCATGTGTGTATaGGTGGGGAGCATATGTGCAAACATGTTCACGTGT +
Preference number: 6 (lower is better)
Translates to: HLWKAEALSMCV*VGSICANMFTC
Trigger: ACACGTGAACATGTTTGCACATATGCTCCCCACGCATACACACATGCTCAGCGCCTCCGCCTTCCAGAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374829.2
CDS CCA 72 bp AGGTGCCAATGGCCAGTACTAAGAATGGTGAAATCATaGTGCACCCCAAGACCTGCTTTATCCCTGGAGCCC +
Preference number: 6 (lower is better)
Translates to: RCQWPVLRMVKS*CTPRPALSLEP
Trigger: GGGCTCCAGGGATAAAGCAGGTCTTGGGGTGCACCATGATTTCACCATTCTTAGTACTGGCCATTGGCACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374832.5
ENST00000374840.8
CDS CAA 72 bp GAGCTTCTGAAGCTCCAGGGCATATTTCAGTGTCTCTaGCGCTTGGTCTCGCCAGTACTTGGGGTCTTTCTC +
Preference number: 6 (lower is better)
Translates to: ELLKLQGIFQCL*RLVSPVLGVFL
Trigger: GAGAAAGACCCCAAGTACTGGCGAGACCAAGCGCAAGAGACACTGAAATATGCCCTGGAGCTTCAGAAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000468526.1
ENST00000539907.5
ENST00000540617.5
CDS CAA 72 bp TATTTCAGTGTCTCTTGCGCTTGGTCTCGCCAGTACTaGGGGTCTTTCTCTTTCTCTGCGCAGAGCACTGGC +
Preference number: 6 (lower is better)
Translates to: YFSVSCAWSRQY*GSFSFSAQSTG
Trigger: GCCAGTGCTCTGCGCAGAGAAAGAGAAAGACCCCAAGTACTGGCGAGACCAAGCGCAAGAGACACTGAAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000468526.1
ENST00000539907.5
ENST00000540617.5
CDS CAA 90 bp GTTGAGCTTCTGAAGCTCCAGGGCATATTTCAGTGTCTCTTGCGCTaGGTCTCGCCAGTACTTGGGGTCTTTCTCTTTCTCTGCGCAGAG +
Preference number: 6 (lower is better)
Translates to: VELLKLQGIFQCLLR*VSPVLGVFLFLCAE
Trigger: CTCTGCGCAGAGAAAGAGAAAGACCCCAAGTACTGGCGAGACCAAGCGCAAGAGACACTGAAATATGCCCTGGAGCTTCAGAAGCTCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000468526.1
ENST00000539907.5
ENST00000540617.5
CDS CAA 90 bp GTTGGTGTTGAGCTTCTGAAGCTCCAGGGCATATTTCAGTGTCTCTaGCGCTTGGTCTCGCCAGTACTTGGGGTCTTTCTCTTTCTCTGG +
Preference number: 6 (lower is better)
Translates to: VGVELLKLQGIFQCL*RLVSPVLGVFLFLW
Trigger: CCAGAGAAAGAGAAAGACCCCAAGTACTGGCGAGACCAAGCGCAAGAGACACTGAAATATGCCCTGGAGCTTCAGAAGCTCAACACCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374832.5
ENST00000374840.8
CDS CAA 90 bp GTTGGTGTTGAGCTTCTGAAGCTCCAGGGCATATTTCAGTGTCTCTaGCGCTTGGTCTCGCCAGTACTTGGGGTCTTTCTCTTTCTCTGC +
Preference number: 6 (lower is better)
Translates to: VGVELLKLQGIFQCL*RLVSPVLGVFLFLC
Trigger: GCAGAGAAAGAGAAAGACCCCAAGTACTGGCGAGACCAAGCGCAAGAGACACTGAAATATGCCCTGGAGCTTCAGAAGCTCAACACCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000468526.1
ENST00000539907.5
ENST00000540617.5
CDS GCA 72 bp TGCCAATGGCCAGTACTAAGAATGGTGAAATCATGGTaGACCCCAAGACCTGCTTTATCCCTGGAGCCCAGA +
Preference number: 6 (lower is better)
Translates to: CQWPVLRMVKSW*TPRPALSLEPR
Trigger: TCTGGGCTCCAGGGATAAAGCAGGTCTTGGGGTGCACCATGATTTCACCATTCTTAGTACTGGCCATTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374832.5
ENST00000374840.8
CDS TCA 72 bp ATGATGACATTCTTAGCCACGTTGGTGTTGAGCTTCTaGAGCTCCAGGGCATATTTCAGTGTCTCTTGCGCT +
Preference number: 6 (lower is better)
Translates to: MMTFLATLVLSF*SSRAYFSVSCA
Trigger: AGCGCAAGAGACACTGAAATATGCCCTGGAGCTTCAGAAGCTCAACACCAACGTGGCTAAGAATGTCATCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374832.5
ENST00000374840.8
ENST00000468526.1
ENST00000539907.5
ENST00000540617.5
CDS CCA 72 bp CTGATGTTCCAATCCTCTTTCAGGAAGGCTCCAGGATaGTCACTCACTCATTCCAATATAACACCACTGAGC +
Preference number: 6 (lower is better)
Translates to: LMFQSSFRKAPG*SLTHSNITPLS
Trigger: GCTCAGTGGTGTTATATTGGAATGAGTGAGTGACCATCCTGGAGCCTTCCTGAAAGAGGATTGGAACATCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374832.5