RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ALPK1 (Homo sapiens)

Ensembl gene IDs: ENSG00000073331

Ensembl transcript IDs: ENST00000177648.13, ENST00000458497.6, ENST00000502366.5, ENST00000504176.6, ENST00000504745.1, ENST00000505127.5, ENST00000505176.5, ENST00000505912.1, ENST00000508589.1, ENST00000509209.1, ENST00000509688.5, ENST00000509722.5, ENST00000512847.1, ENST00000514594.1, ENST00000515106.1, ENST00000515330.5, ENST00000650871.1

Found 1211 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGGGAACATCCATGCTGTCGAGCAGTTGCCCCTCCTCATCCACTGTaGAGGCATCAGGGTCGATGCCCTGCTCTGCGACTGGGCCACCAC +
Preference number: 1 (lower is better)
Translates to: REHPCCRAVAPPHPL*RHQGRCPALRLGHH
Trigger: GTGGTGGCCCAGTCGCAGAGCAGGGCATCGACCCTGATGCCTCCACAGTGGATGAGGAGGGGCAACTGCTCGACAGCATGGATGTTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR GCA 90 bp GAGCCGTGCCCATTTGTGCAGGGAACATCCATGCTGTCGAGCAGTTaGCCCTCCTCATCCACTGTGGAGGCATCAGGGTCGATGCCCTGC +
Preference number: 1 (lower is better)
Translates to: EPCPFVQGTSMLSSS*PSSSTVEASGSMPC
Trigger: GCAGGGCATCGACCCTGATGCCTCCACAGTGGATGAGGAGGGGCAACTGCTCGACAGCATGGATGTTCCCTGCACAAATGGGCACGGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR GCA 90 bp CGAGCAGTTGCCCCTCCTCATCCACTGTGGAGGCATCAGGGTCGATaGCCTGCTCTGCGACTGGGCCACCACTTTTTCTGGAGTCAGGAT +
Preference number: 1 (lower is better)
Translates to: RAVAPPHPLWRHQGR*PALRLGHHFFWSQD
Trigger: ATCCTGACTCCAGAAAAAGTGGTGGCCCAGTCGCAGAGCAGGGCATCGACCCTGATGCCTCCACAGTGGATGAGGAGGGGCAACTGCTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR GCA 90 bp GAGCGGCGTATAGGCACTGAAGGCAGCTGCCAGCTTGCAGGCTTCTaGAGCGGACAGCAAATGGTGGTCAAACTCCTTCAGCAGGCTCAA +
Preference number: 1 (lower is better)
Translates to: ERRIGTEGSCQLAGF*SGQQMVVKLLQQAQ
Trigger: TTGAGCCTGCTGAAGGAGTTTGACCACCATTTGCTGTCCGCTGCAGAAGCCTGCAAGCTGGCAGCTGCCTTCAGTGCCTATACGCCGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR GCA 90 bp CACAGCTGTGAGCACGAAGAGCGGCGTATAGGCACTGAAGGCAGCTaGCAGCTTGCAGGCTTCTGCAGCGGACAGCAAATGGTGGTCAAA +
Preference number: 1 (lower is better)
Translates to: HSCEHEERRIGTEGS*QLAGFCSGQQMVVK
Trigger: TTTGACCACCATTTGCTGTCCGCTGCAGAAGCCTGCAAGCTGGCAGCTGCCTTCAGTGCCTATACGCCGCTCTTCGTGCTCACAGCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR GCA 90 bp AGGAATTGGGGGTCTCCGCCCTCTGACCAGGCGGCTGTCTCAGAATaGACAGTCTATGAGAGCCGTGCCCATTTGTGCAGGGAACATCCA +
Preference number: 1 (lower is better)
Translates to: RNWGSPPSDQAAVSE*TVYESRAHLCREHP
Trigger: TGGATGTTCCCTGCACAAATGGGCACGGCTCTCATAGACTGTGCATTCTGAGACAGCCGCCTGGTCAGAGGGCGGAGACCCCCAATTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR GCA 90 bp TGCACAGTCTATGAGAGCCGTGCCCATTTGTGCAGGGAACATCCATaGTGTCGAGCAGTTGCCCCTCCTCATCCACTGTGGAGGCATCAG +
Preference number: 1 (lower is better)
Translates to: CTVYESRAHLCREHP*CRAVAPPHPLWRHQ
Trigger: CTGATGCCTCCACAGTGGATGAGGAGGGGCAACTGCTCGACAGCATGGATGTTCCCTGCACAAATGGGCACGGCTCTCATAGACTGTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR GCA 90 bp GCGGCTGTCTCAGAATGCACAGTCTATGAGAGCCGTGCCCATTTGTaGAGGGAACATCCATGCTGTCGAGCAGTTGCCCCTCCTCATCCA +
Preference number: 1 (lower is better)
Translates to: AAVSECTVYESRAHL*REHPCCRAVAPPHP
Trigger: TGGATGAGGAGGGGCAACTGCTCGACAGCATGGATGTTCCCTGCACAAATGGGCACGGCTCTCATAGACTGTGCATTCTGAGACAGCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR TCA 90 bp GAGGATGAGCTGGAGTTCTGGCTGCAGTTTAGCATGTTTCCAGGCTaGTTTCCTTCCTCTGTGGTAGTGCAGTCCTCGCTGAGGACAGGG +
Preference number: 1 (lower is better)
Translates to: EDELEFWLQFSMFPG*FPSSVVVQSSLRTG
Trigger: CCCTGTCCTCAGCGAGGACTGCACTACCACAGAGGAAGGAAATCAGCCTGGAAACATGCTAAACTGCAGCCAGAACTCCAGCTCATCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR GCA 90 bp GAAATTGTACAGCTTCCCCATTGCTTCCTTACAGAGCTGACTTGCTaGATGGACCGTCCCTGTCTCCCCATGGAGCCTTCTGTGCACTGT +
Preference number: 1 (lower is better)
Translates to: EIVQLPHCFLTELTC*MDRPCLPMEPSVHC
Trigger: ACAGTGCACAGAAGGCTCCATGGGGAGACAGGGACGGTCCATGCAGCAAGTCAGCTCTGTAAGGAAGCAATGGGGAAGCTGTACAATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR TCA 90 bp CTGGCATTTCCCCTGCTGGCACTCATTCTCTCTCCTGCTACCCTATaGAGAGGTGCCTTCTGCCATGATTGTAAGTTTCCTGAGGTCTCC +
Preference number: 1 (lower is better)
Translates to: LAFPLLALILSPATL*RGAFCHDCKFPEVS
Trigger: GGAGACCTCAGGAAACTTACAATCATGGCAGAAGGCACCTCTTCATAGGGTAGCAGGAGAGAGAATGAGTGCCAGCAGGGGAAATGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
3UTR TCA 90 bp ATTCTGTCACATAGTGCTGTGCGGTCATCTGTCGCTCCACATCAGTaGAGTGGTGCCAGAGCCCCTTCTGCTCCTTATAGTCTTTCCCAA +
Preference number: 1 (lower is better)
Translates to: ILSHSAVRSSVAPHQ*SGARAPSAPYSLSQ
Trigger: TTGGGAAAGACTATAAGGAGCAGAAGGGGCTCTGGCACCACTTCACTGATGTGGAGCGACAGATGACCGCACAGCACTATGTGACAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505127.5
ENST00000509722.5
3UTR CCA 90 bp CTGAAGGCAGCTGCCAGCTTGCAGGCTTCTGCAGCGGACAGCAAATaGTGGTCAAACTCCTTCAGCAGGCTCAAATTAATTTGTGGATTG +
Preference number: 1 (lower is better)
Translates to: LKAAASLQASAADSK*WSNSFSRLKLICGL
Trigger: CAATCCACAAATTAATTTGAGCCTGCTGAAGGAGTTTGACCACCATTTGCTGTCCGCTGCAGAAGCCTGCAAGCTGGCAGCTGCCTTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR CCA 90 bp TCTCTTTCCTCATCTTTCCCGGCAATGAAACCCAAGAACTCCCACTaGAATTCAGATAGGACCAAGGGCTGTCCCCCTCAGAAGAACCAC +
Preference number: 1 (lower is better)
Translates to: SLSSSFPAMKPKNSH*NSDRTKGCPPQKNH
Trigger: GTGGTTCTTCTGAGGGGGACAGCCCTTGGTCCTATCTGAATTCCAGTGGGAGTTCTTGGGTTTCATTGCCGGGAAAGATGAGGAAAGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR GCA 90 bp TGGCTCAGTCTCAGTCTCCACATCTTGATCCAAGGAGACTCGAAATaGATCAGAATGGGTCCAGTTTCTCCTTCCTCCCCTTCTGAGTTC +
Preference number: 1 (lower is better)
Translates to: WLSLSLHILIQGDSK*IRMGPVSPSSPSEF
Trigger: GAACTCAGAAGGGGAGGAAGGAGAAACTGGACCCATTCTGATGCATTTCGAGTCTCCTTGGATCAAGATGTGGAGACTGAGACTGAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR GCA 90 bp CCTCAGACAAGGCAGTGGAACACTGAGTGTCCACCAGATGTTCTTTaGCAGGCTCTTTTCTGGCTGACCTGTCGTCAACGTGATAATTCA +
Preference number: 1 (lower is better)
Translates to: PQTRQWNTECPPDVL*QALFWLTCRQRDNS
Trigger: TGAATTATCACGTTGACGACAGGTCAGCCAGAAAAGAGCCTGGCAAAGAACATCTGGTGGACACTCAGTGTTCCACTGCCTTGTCTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR CCA 90 bp AGAGGCCCTTTTTATCCGGCTGAGGAAGTGCCAAATATCCTACAATaGAGGCCCATATTAACTCTGCTGCTTCGTACCACATCCCCAGCT +
Preference number: 1 (lower is better)
Translates to: RGPFYPAEEVPNILQ*RPILTLLLRTTSPA
Trigger: AGCTGGGGATGTGGTACGAAGCAGCAGAGTTAATATGGGCCTCCATTGTAGGATATTTGGCACTTCCTCAGCCGGATAAAAAGGGCCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR CCA 90 bp GCAGAGGAACTAAACCCTGATAAGTTGCTCCAAGCACTGGAAGTCTaGCTGCCACTCAGAGACTTGTTGAAAACAGCTCCCTCACCATTG +
Preference number: 1 (lower is better)
Translates to: AEELNPDKLLQALEV*LPLRDLLKTAPSPL
Trigger: CAATGGTGAGGGAGCTGTTTTCAACAAGTCTCTGAGTGGCAGCCAGACTTCCAGTGCTTGGAGCAACTTATCAGGGTTTAGTTCCTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR CCA 90 bp TGGAACACTGAGTGTCCACCAGATGTTCTTTGCCAGGCTCTTTTCTaGCTGACCTGTCGTCAACGTGATAATTCACTTCCTCCCAGCTTG +
Preference number: 1 (lower is better)
Translates to: WNTECPPDVLCQALF*LTCRQRDNSLPPSL
Trigger: CAAGCTGGGAGGAAGTGAATTATCACGTTGACGACAGGTCAGCCAGAAAAGAGCCTGGCAAAGAACATCTGGTGGACACTCAGTGTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR TCA 90 bp CTTCTGTGCACTGTGGTGAGACCGAAAGCAGCTTTGACAAAGCTGTaGAGCTCCTGTTTTCCAGTAACAGGCTCATCATCTCTCTTGGTG +
Preference number: 1 (lower is better)
Translates to: LLCTVVRPKAALTKL*SSCFPVTGSSSLLV
Trigger: CACCAAGAGAGATGATGAGCCTGTTACTGGAAAACAGGAGCTTCACAGCTTTGTCAAAGCTGCTTTCGGTCTCACCACAGTGCACAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR CCA 90 bp TGGGGTATTATGAGGCGAGAAGGGTGTCAAGGGCATCTGTTGCTGTaGCTGATTTTGAGAAGGCTCCAAATTGTCATTGTTGGGTTCCTG +
Preference number: 1 (lower is better)
Translates to: WGIMRREGCQGHLLL*LILRRLQIVIVGFL
Trigger: CAGGAACCCAACAATGACAATTTGGAGCCTTCTCAAAATCAGCCACAGCAACAGATGCCCTTGACACCCTTCTCGCCTCATAATACCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR CCA 90 bp CACTGGAAAATGCAGGTGATTTCAGCCACCACACTGAGGATGAGCTaGAGTTCTGGCTGCAGTTTAGCATGTTTCCAGGCTGATTTCCTT +
Preference number: 1 (lower is better)
Translates to: HWKMQVISATTLRMS*SSGCSLACFQADFL
Trigger: AAGGAAATCAGCCTGGAAACATGCTAAACTGCAGCCAGAACTCCAGCTCATCCTCAGTGTGGTGGCTGAAATCACCTGCATTTTCCAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR TCA 90 bp CTTCTTGAGACAGAGCTTCTCTGTCCTGACTTCTGGAGGAAGTGCTaGAATTGTACAGCTTCCCCATTGCTTCCTTACAGAGCTGACTTG +
Preference number: 1 (lower is better)
Translates to: LLETELLCPDFWRKC*NCTASPLLPYRADL
Trigger: CAAGTCAGCTCTGTAAGGAAGCAATGGGGAAGCTGTACAATTTCAGCACTTCCTCCAGAAGTCAGGACAGAGAAGCTCTGTCTCAAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR GCA 90 bp TGCCAATTAAATGCAGGACTTAAAGTGATACTGATCAATTCCTCTTaGAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCC +
Preference number: 1 (lower is better)
Translates to: CQLNAGLKVILINSS*KSLARTCVTALPKP
Trigger: GGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAGTATCACTTTAAGTCCTGCATTTAATTGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
3UTR GCA 90 bp ATTCTCACAAGATCTGATGGCTTTATAAGCATCTGGCATTTCCCCTaGTGGCACTCATTCTCTCTCCTGCTACCCTATGAAGAGGTGCCT +
Preference number: 1 (lower is better)
Translates to: ILTRSDGFISIWHFP*WHSFSLLLPYEEVP
Trigger: AGGCACCTCTTCATAGGGTAGCAGGAGAGAGAATGAGTGCCAGCAGGGGAAATGCCAGATGCTTATAAAGCCATCAGATCTTGTGAGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
3UTR GCA 90 bp GTTTTGTTCATAGAGTCTCTTGTTAAATTCTGTCACATAGTGCTGTaGGGTCATCTGTCGCTCCACATCAGTGAAGTGGTGCCAGAGCCC +
Preference number: 1 (lower is better)
Translates to: VLFIESLVKFCHIVL*GHLSLHISEVVPEP
Trigger: GGGCTCTGGCACCACTTCACTGATGTGGAGCGACAGATGACCGCACAGCACTATGTGACAGAATTTAACAAGAGACTCTATGAACAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505127.5
ENST00000509722.5
3UTR TCA 90 bp TCAGAATGGGTCCAGTTTCTCCTTCCTCCCCTTCTGAGTTCCCTCTaGACATTCTTACCCATTAGGGAGGAAGATATTCCTGTGTCTCTT +
Preference number: 1 (lower is better)
Translates to: SEWVQFLLPPLLSSL*TFLPIREEDIPVSL
Trigger: AAGAGACACAGGAATATCTTCCTCCCTAATGGGTAAGAATGTTCAGAGGGAACTCAGAAGGGGAGGAAGGAGAAACTGGACCCATTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR TCA 90 bp CCAGAATCAGAAGACCAAGAAGCAGAACGATATGAGGGTCTGGAGTaGGCAGAAGTATTTCTGGGTCCCATATTTCTGACTTCCTGGATA +
Preference number: 1 (lower is better)
Translates to: PESEDQEAERYEGLE*AEVFLGPIFLTSWI
Trigger: TATCCAGGAAGTCAGAAATATGGGACCCAGAAATACTTCTGCTCACTCCAGACCCTCATATCGTTCTGCTTCTTGGTCTTCTGATTCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR TCA 90 bp ATTCTTGGGCCTACCAGAATCAGAAGACCAAGAAGCAGAACGATATaGGGGTCTGGAGTGAGCAGAAGTATTTCTGGGTCCCATATTTCT +
Preference number: 1 (lower is better)
Translates to: ILGPTRIRRPRSRTI*GSGVSRSISGSHIS
Trigger: AGAAATATGGGACCCAGAAATACTTCTGCTCACTCCAGACCCTCATATCGTTCTGCTTCTTGGTCTTCTGATTCTGGTAGGCCCAAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR CCA 90 bp CAAAGGCTTCTTCTTTTTGGACTGAAGGATGTGTGCCCATATTCTTaGGCCTACCAGAATCAGAAGACCAAGAAGCAGAACGATATGAGG +
Preference number: 1 (lower is better)
Translates to: QRLLLFGLKDVCPYS*AYQNQKTKKQNDMR
Trigger: CCTCATATCGTTCTGCTTCTTGGTCTTCTGATTCTGGTAGGCCCAAGAATATGGGCACACATCCTTCAGTCCAAAAAGAAGAAGCCTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR GCA 90 bp TTGATAACTGTGGCAGAGGGAAAGAGGCTCTGCAGGATCTTGTGCTaGCAATTAAATGCAGGACTTAAAGTGATACTGATCAATTCCTCT +
Preference number: 1 (lower is better)
Translates to: LITVAEGKRLCRILC*QLNAGLKVILINSS
Trigger: AGAGGAATTGATCAGTATCACTTTAAGTCCTGCATTTAATTGGCAGCACAAGATCCTGCAGAGCCTCTTTCCCTCTGCCACAGTTATCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
3UTR GCA 90 bp TTCTTGATAACTGTGGCAGAGGGAAAGAGGCTCTGCAGGATCTTGTaGTGCCAATTAAATGCAGGACTTAAAGTGATACTGATCAATTCC +
Preference number: 1 (lower is better)
Translates to: FLITVAEGKRLCRIL*CQLNAGLKVILINS
Trigger: GGAATTGATCAGTATCACTTTAAGTCCTGCATTTAATTGGCAGCACAAGATCCTGCAGAGCCTCTTTCCCTCTGCCACAGTTATCAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000650871.1
3UTR TCA 90 bp CAAAGGACCAGACTGTGCCGTATTCTATGTGCATGGTTTCTCCATTaGAGGTCTAGTCAAAGAAAGACGATGGCAGATTTCATTACATTC +
Preference number: 1 (lower is better)
Translates to: QRTRLCRILCAWFLH*RSSQRKTMADFITF
Trigger: GAATGTAATGAAATCTGCCATCGTCTTTCTTTGACTAGACCTTCAATGGAGAAACCATGCACATAGAATACGGCACAGTCTGGTCCTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505127.5
ENST00000509722.5
3UTR GCA 90 bp CAACAATTATTTCAAAGGCTTCTTCTTTTTGGACTGAAGGATGTGTaGCCATATTCTTGGGCCTACCAGAATCAGAAGACCAAGAAGCAG +
Preference number: 1 (lower is better)
Translates to: QQLFQRLLLFGLKDV*PYSWAYQNQKTKKQ
Trigger: CTGCTTCTTGGTCTTCTGATTCTGGTAGGCCCAAGAATATGGGCACACATCCTTCAGTCCAAAAAGAAGAAGCCTTTGAAATAATTGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR CCA 90 bp TCTGTTGCTGTGGCTGATTTTGAGAAGGCTCCAAATTGTCATTGTTaGGTTCCTGAAGAGAGAGATCATGAAGCTGTGAATGCAATGAAT +
Preference number: 1 (lower is better)
Translates to: SVAVADFEKAPNCHC*VPEERDHEAVNAMN
Trigger: ATTCATTGCATTCACAGCTTCATGATCTCTCTCTTCAGGAACCCAACAATGACAATTTGGAGCCTTCTCAAAATCAGCCACAGCAACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR GCA 90 bp CCATGGTGTATATGTACCACATTTTCTTTATCCAGTCTACCTAAATaGCCATCAAGGACAGACTGGATAAAGAAAACTGTACCACTCTTC +
Preference number: 1 (lower is better)
Translates to: PWCICTTFSLSSLPK*PSRTDWIKKTVPLF
Trigger: GAAGAGTGGTACAGTTTTCTTTATCCAGTCTGTCCTTGATGGGCATTTAGGTAGACTGGATAAAGAAAATGTGGTACATATACACCATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
3UTR CAA 90 bp AGAGCCGTGCCCATTTGTGCAGGGAACATCCATGCTGTCGAGCAGTaGCCCCTCCTCATCCACTGTGGAGGCATCAGGGTCGATGCCCTG +
Preference number: 2 (lower is better)
Translates to: RAVPICAGNIHAVEQ*PLLIHCGGIRVDAL
Trigger: CAGGGCATCGACCCTGATGCCTCCACAGTGGATGAGGAGGGGCAACTGCTCGACAGCATGGATGTTCCCTGCACAAATGGGCACGGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR-3UTR CCA 90 bp GCCCCTCCTCATCCACTGTGGAGGCATCAGGGTCGATGCCCTGCTCTGCGACTGCCTCTTGCAAATCATTaGCCAGAACCTGTGTCACGG +
Preference number: 2 (lower is better)
Translates to: APPHPLWRHQGRCPALRLPLANH*PEPVSR
Trigger: CCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGG...CAGTCGCAGAGCAGGGCATCGACCCTGATGCCTCCACAGTGGATGAGGAGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR-3UTR CCA 90 bp GCTTACAGAGGAATTGGGGGTCTCCGCCCTCTGACCAGGCGGCTGTCTCAGAATGTCCCTGTCTCCCCATaGAGCCTTCTGTGCACTGTG +
Preference number: 2 (lower is better)
Translates to: AYRGIGGLRPLTRRLSQNVPVSP*SLLCTV
Trigger: CACAGTGCACAGAAGGCTCCATGGGGAGACAGGGAC...ATTCTGAGACAGCCGCCTGGTCAGAGGGCGGAGACCCCCAATTCCTCTGTAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR CAA 90 bp CAGGCGGCTGTCTCAGAATGCACAGTCTATGAGAGCCGTGCCCATTaGTGCAGGGAACATCCATGCTGTCGAGCAGTTGCCCCTCCTCAT +
Preference number: 2 (lower is better)
Translates to: QAAVSECTVYESRAH*CREHPCCRAVAPPH
Trigger: ATGAGGAGGGGCAACTGCTCGACAGCATGGATGTTCCCTGCACAAATGGGCACGGCTCTCATAGACTGTGCATTCTGAGACAGCCGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR-3UTR GCA 90 bp TTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACACAGAGCTGACTTGCTaGATGGACCGTCCCTGTCTC +
Preference number: 2 (lower is better)
Translates to: LQIIGQNLCHGPAQAPKDTELTC*MDRPCL
Trigger: GAGACAGGGACGGTCCATGCAGCAAGTCAGCTCTGT...GTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR-3UTR TCA 90 bp CATTGCTGTAGTCCGATGGCTCAGTCTCAGTCTCCACATCTTGATCCAAGGAGAGCGGCGTATAGGCACTaGAGGCAGCTGCCAGCTTGC +
Preference number: 2 (lower is better)
Translates to: HCCSPMAQSQSPHLDPRRAAYRH*RQLPAC
Trigger: GCAAGCTGGCAGCTGCCTTCAGTGCCTATACGCCGC...TCTCCTTGGATCAAGATGTGGAGACTGAGACTGAGCCATCGGACTACAGCAATG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR-3UTR TCA 90 bp GCTTACAGAGGAATTGGGGGTCTCCGCCCTCTGACCAGGCGGCTGTCTCAGAATGACCGAAAGCAGCTTTaGCAAAGCTGTGAAGCTCCT +
Preference number: 2 (lower is better)
Translates to: AYRGIGGLRPLTRRLSQNDRKQL*QSCEAP
Trigger: AGGAGCTTCACAGCTTTGTCAAAGCTGCTTTCGGTC...ATTCTGAGACAGCCGCCTGGTCAGAGGGCGGAGACCCCCAATTCCTCTGTAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR-3UTR TCA 90 bp CCCAAGAACTCCCACTGGAATTCAGATAGGACCAAGGGCTGTCCCCCTCAGAAGGCTTCCTTACAGAGCTaGCTTGCTGCATGGACCGTC +
Preference number: 2 (lower is better)
Translates to: PKNSHWNSDRTKGCPPQKASLQS*LAAWTV
Trigger: GACGGTCCATGCAGCAAGTCAGCTCTGTAAGGAAGC...CTTCTGAGGGGGACAGCCCTTGGTCCTATCTGAATTCCAGTGGGAGTTCTTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR-3UTR CCA 90 bp TTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACGCAGCGGACAGCAAATaGTGGTCAAACTCCTTCAGC +
Preference number: 2 (lower is better)
Translates to: LQIIGQNLCHGPAQAPKDAADSK*WSNSFS
Trigger: GCTGAAGGAGTTTGACCACCATTTGCTGTCCGCTGC...GTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR CAA 90 bp CCTTGCAGGACTTATGCCCAGAAGCAGCGGTCTCCTGACCCATTCTaGATAACTGTGGCAGAGGGAAAGAGGCTCTGCAGGATCTTGTGC +
Preference number: 2 (lower is better)
Translates to: PCRTYAQKQRSPDPF*ITVAEGKRLCRILC
Trigger: GCACAAGATCCTGCAGAGCCTCTTTCCCTCTGCCACAGTTATCAAGAATGGGTCAGGAGACCGCTGCTTCTGGGCATAAGTCCTGCAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000650871.1
3UTR CAA 90 bp GCCCTGCTCTGCGACTGGGCCACCACTTTTTCTGGAGTCAGGATTTaGAACAGGCCAATTAGGGGTGAAGGAGCTACATGGCAGCATGGA +
Preference number: 2 (lower is better)
Translates to: ALLCDWATTFSGVRI*NRPIRGEGATWQHG
Trigger: TCCATGCTGCCATGTAGCTCCTTCACCCCTAATTGGCCTGTTCAAAATCCTGACTCCAGAAAAAGTGGTGGCCCAGTCGCAGAGCAGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR-3UTR TCA 90 bp CATTGCTGTAGTCCGATGGCTCAGTCTCAGTCTCCACATCTTGATCCAAGGAGAGTCGCTCCACATCAGTaGAGTGGTGCCAGAGCCCCT +
Preference number: 2 (lower is better)
Translates to: HCCSPMAQSQSPHLDPRRVAPHQ*SGARAP
Trigger: AGGGGCTCTGGCACCACTTCACTGATGTGGAGCGAC...TCTCCTTGGATCAAGATGTGGAGACTGAGACTGAGCCATCGGACTACAGCAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR-3UTR TCA 90 bp GCTTACAGAGGAATTGGGGGTCTCCGCCCTCTGACCAGGCGGCTGTCTCAGAATCACTCAGAGACTTGTTaGAAACAGCTCCCTCACCAT +
Preference number: 2 (lower is better)
Translates to: AYRGIGGLRPLTRRLSQNHSETC*KQLPHH
Trigger: ATGGTGAGGGAGCTGTTTTCAACAAGTCTCTGAGTG...ATTCTGAGACAGCCGCCTGGTCAGAGGGCGGAGACCCCCAATTCCTCTGTAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR-3UTR TCA 90 bp CCTCTGACCAGGCGGCTGTCTCAGAATGCACAGTCTATGAGAGCCGTGCCCATTTTGTGCAGGACCCTGTaGAAGTCTAAGGGTGCATCT +
Preference number: 2 (lower is better)
Translates to: PLTRRLSQNAQSMRAVPILCRTL*KSKGAS
Trigger: AGATGCACCCTTAGACTTTCACAGGGTCCTGCACAA...AATGGGCACGGCTCTCATAGACTGTGCATTCTGAGACAGCCGCCTGGTCAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR-3UTR GCA 90 bp GCAGAGGGAAAGAGGCTCTGCAGGATCTTGTGCTGCCAATTAAATGCAGGACTTGGCACTGAAGGCAGCTaGCAGCTTGCAGGCTTCTGC +
Preference number: 2 (lower is better)
Translates to: AEGKRLCRILCCQLNAGLGTEGS*QLAGFC
Trigger: GCAGAAGCCTGCAAGCTGGCAGCTGCCTTCAGTGCC...AAGTCCTGCATTTAATTGGCAGCACAAGATCCTGCAGAGCCTCTTTCCCTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR-3UTR GCA 90 bp GCTTACAGAGGAATTGGGGGTCTCCGCCCTCTGACCAGGCGGCTGTCTCAGAATGTACAGCTTCCCCATTaGTTCCTTACAGAGCTGACT +
Preference number: 2 (lower is better)
Translates to: AYRGIGGLRPLTRRLSQNVQLPH*FLTELT
Trigger: AGTCAGCTCTGTAAGGAAGCAATGGGGAAGCTGTAC...ATTCTGAGACAGCCGCCTGGTCAGAGGGCGGAGACCCCCAATTCCTCTGTAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR-3UTR CCA 90 bp CCCACTGTCCACCCTCTGATAAGCCCTGGTGTGTGTTGTTCCCTCTATGTGTCCTGGCATTTCCCCTGCTaGCACTCATTCTCTCTCCTG +
Preference number: 2 (lower is better)
Translates to: PTVHPLISPGVCCSLYVSWHFPC*HSFSLL
Trigger: CAGGAGAGAGAATGAGTGCCAGCAGGGGAAATGCCA...GGACACATAGAGGGAACAACACACACCAGGGCTTATCAGAGGGTGGACAGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
3UTR CAA 90 bp TCTCCCTCCTCCCACTGTCCACCCTCTGATAAGCCCTGGTGTGTGTaGTTCCCTCTATGTGTCCACCTACTCTCATCACTTAGCTCTCAC +
Preference number: 2 (lower is better)
Translates to: SPSSHCPPSDKPWCV*FPLCVHLLSSLSSH
Trigger: GTGAGAGCTAAGTGATGAGAGTAGGTGGACACATAGAGGGAACAACACACACCAGGGCTTATCAGAGGGTGGACAGTGGGAGGAGGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
3UTR-3UTR TCA 90 bp CCCAAGAACTCCCACTGGAATTCAGATAGGACCAAGGGCTGTCCCCCTCAGAAGCATCATCTCTCTTGGTaGGGAGGCCAATCTCAAAGG +
Preference number: 2 (lower is better)
Translates to: PKNSHWNSDRTKGCPPQKHHLSW*GGQSQR
Trigger: CCTTTGAGATTGGCCTCCTCACCAAGAGAGATGATG...CTTCTGAGGGGGACAGCCCTTGGTCCTATCTGAATTCCAGTGGGAGTTCTTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR-3UTR GCA 90 bp AAGCAGCGGTCTCCTGACCCATTCTTGATAACTGTGGCAGAGGGAAAGAGGCTCGAGGGAAAGAGGCTCTaGAGGATCTTGTGCTGCCAA +
Preference number: 2 (lower is better)
Translates to: KQRSPDPFLITVAEGKRLEGKRL*RILCCQ
Trigger: TTGGCAGCACAAGATCCTGCAGAGCCTCTTTCCCTC...GAGCCTCTTTCCCTCTGCCACAGTTATCAAGAATGGGTCAGGAGACCGCTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000650871.1
3UTR-3UTR GCA 90 bp TTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCCATGTTGCTTTCCTTaGAGGACTTATGCCCAGAAG +
Preference number: 2 (lower is better)
Translates to: LQIIGQNLCHGPAQAPKDPCCFP*RTYAQK
Trigger: CTTCTGGGCATAAGTCCTGCAAGGAAAGCAACATGG...GTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000650871.1
3UTR-3UTR TCA 90 bp CTCCGCCCTCTGACCAGGCGGCTGTCTCAGAATGCACAGTCTATGAGAGCCGTGTTCTTCTTTTTGGACTaGAGGATGTGTGCCCATATT +
Preference number: 2 (lower is better)
Translates to: LRPLTRRLSQNAQSMRAVFFFLD*RMCAHI
Trigger: AATATGGGCACACATCCTTCAGTCCAAAAAGAAGAA...CACGGCTCTCATAGACTGTGCATTCTGAGACAGCCGCCTGGTCAGAGGGCGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR-3UTR CCA 90 bp AATTCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCGTGTGCCCATATTCTTaGGCCTACCAGAATCAGAAG +
Preference number: 2 (lower is better)
Translates to: NSSCKSLARTCVTALPKPVCPYS*AYQNQK
Trigger: CTTCTGATTCTGGTAGGCCCAAGAATATGGGCACAC...GGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR-3UTR TCA 90 bp AATTCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCGCTTTGACAAAGCTGTaGAGCTCCTGTTTTCCAGTA +
Preference number: 2 (lower is better)
Translates to: NSSCKSLARTCVTALPKPALTKL*SSCFPV
Trigger: TACTGGAAAACAGGAGCTTCACAGCTTTGTCAAAGC...GGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR-3UTR TCA 90 bp CATAAGAAAAATGGCCATAGGCCAAGCCATATTCTGTGGCTTTGTATTCTGTTTGGGGTCTCCGCCCTCTaGCCAGGCGGCTGTCTCAGA +
Preference number: 2 (lower is better)
Translates to: HKKNGHRPSHILWLCILFGVSAL*PGGCLR
Trigger: TCTGAGACAGCCGCCTGGTCAGAGGGCGGAGACCCC...AAACAGAATACAAAGCCACAGAATATGGCTTGGCCTATGGCCATTTTTCTTATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR-3UTR GCA 90 bp TTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCTGATCAATTCCTCTTaGAAATCATTGGCCAGAACC +
Preference number: 2 (lower is better)
Translates to: LQIIGQNLCHGPAQAPKDLINSS*KSLART
Trigger: GGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAG...GTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
3UTR-3UTR GCA 90 bp TTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACTGCAGGATCTTGTGCTaGCAATTAAATGCAGGACTT +
Preference number: 2 (lower is better)
Translates to: LQIIGQNLCHGPAQAPKDCRILC*QLNAGL
Trigger: AAGTCCTGCATTTAATTGGCAGCACAAGATCCTGCA...GTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
3UTR-3UTR GCA 90 bp CCCAAGAACTCCCACTGGAATTCAGATAGGACCAAGGGCTGTCCCCCTCAGAAGAGGACAATAAACACGTaGCACGGATATTCACAGCTG +
Preference number: 2 (lower is better)
Translates to: PKNSHWNSDRTKGCPPQKRTINT*HGYSQL
Trigger: CAGCTGTGAATATCCGTGGCACGTGTTTATTGTCCT...CTTCTGAGGGGGACAGCCCTTGGTCCTATCTGAATTCCAGTGGGAGTTCTTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR-3UTR CCA 90 bp TTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACTCTCAAAGGCCTCTTTaGCTTCACACAGATGTAAGT +
Preference number: 2 (lower is better)
Translates to: LQIIGQNLCHGPAQAPKDSQRPL*LHTDVS
Trigger: ACTTACATCTGTGTGAAGCCAAAGAGGCCTTTGAGA...GTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR CAA 90 bp AATGCAGGACTTAAAGTGATACTGATCAATTCCTCTTGCAAATCATaGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACC +
Preference number: 2 (lower is better)
Translates to: NAGLKVILINSSCKS*ARTCVTALPKPQRT
Trigger: GGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAGTATCACTTTAAGTCCTGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
3UTR-3UTR TCA 90 bp GCCCCTTCTGCTCCTTATAGTCTTTCCCAACATACCTCCCCAGAATTTCTTCTTTGTGCTCGGTGGAGTTaGCTGGGCTTAAAAACCCCC +
Preference number: 2 (lower is better)
Translates to: APSAPYSLSQHTSPEFLLCARWS*LGLKTP
Trigger: GGGGGTTTTTAAGCCCAGTCAACTCCACCGAGCACA...AAGAAGAAATTCTGGGGAGGTATGTTGGGAAAGACTATAAGGAGCAGAAGGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR-3UTR GCA 90 bp AAGCAGCGGTCTCCTGACCCATTCTTGATAACTGTGGCAGAGGGAAAGAGGCTCTGCCTTTCTCAAGAGTaGTTTTCATCCCTCATGGGT +
Preference number: 2 (lower is better)
Translates to: KQRSPDPFLITVAEGKRLCLSQE*FSSLMG
Trigger: ACCCATGAGGGATGAAAAGCACTCTTGAGAAAGGCA...GAGCCTCTTTCCCTCTGCCACAGTTATCAAGAATGGGTCAGGAGACCGCTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000650871.1
3UTR-3UTR CCA 90 bp GCAGAGGGAAAGAGGCTCTGCAGGATCTTGTGCTGCCAATTAAATGCAGGACTTCCTCTTGCAAATCATTaGCCAGAACCTGTGTCACGG +
Preference number: 2 (lower is better)
Translates to: AEGKRLCRILCCQLNAGLPLANH*PEPVSR
Trigger: CCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGG...AAGTCCTGCATTTAATTGGCAGCACAAGATCCTGCAGAGCCTCTTTCCCTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
3UTR-3UTR CCA 90 bp TTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACAAATGTTCCTTCACCTaGGCAATCACAGACATAACT +
Preference number: 2 (lower is better)
Translates to: LQIIGQNLCHGPAQAPKDKCSFT*AITDIT
Trigger: AGTTATGTCTGTGATTGCCCAGGTGAAGGAACATTT...GTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR CAA 90 bp CTCACCATTGCTGTAGTCCGATGGCTCAGTCTCAGTCTCCACATCTaGATCCAAGGAGACTCGAAATGCATCAGAATGGGTCCAGTTTCT +
Preference number: 2 (lower is better)
Translates to: LTIAVVRWLSLSLHI*IQGDSKCIRMGPVS
Trigger: AGAAACTGGACCCATTCTGATGCATTTCGAGTCTCCTTGGATCAAGATGTGGAGACTGAGACTGAGCCATCGGACTACAGCAATGGTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR CAA 90 bp ATGAGGCGAGAAGGGTGTCAAGGGCATCTGTTGCTGTGGCTGATTTaGAGAAGGCTCCAAATTGTCATTGTTGGGTTCCTGAAGAGAGAG +
Preference number: 2 (lower is better)
Translates to: MRREGCQGHLLLWLI*RRLQIVIVGFLKRE
Trigger: CTCTCTCTTCAGGAACCCAACAATGACAATTTGGAGCCTTCTCAAAATCAGCCACAGCAACAGATGCCCTTGACACCCTTCTCGCCTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR CAA 90 bp AATGCCTGGGGTATTATGAGGCGAGAAGGGTGTCAAGGGCATCTGTaGCTGTGGCTGATTTTGAGAAGGCTCCAAATTGTCATTGTTGGG +
Preference number: 2 (lower is better)
Translates to: NAWGIMRREGCQGHL*LWLILRRLQIVIVG
Trigger: CCCAACAATGACAATTTGGAGCCTTCTCAAAATCAGCCACAGCAACAGATGCCCTTGACACCCTTCTCGCCTCATAATACCCCAGGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR-3UTR TCA 90 bp GCCCCTTCTGCTCCTTATAGTCTTTCCCAACATACCTCCCCAGAATTTCTTCTTGGATATTCACAGCTGTaGGCACGAAGAGCGGCGTAT +
Preference number: 2 (lower is better)
Translates to: APSAPYSLSQHTSPEFLLGYSQL*ARRAAY
Trigger: ATACGCCGCTCTTCGTGCTCACAGCTGTGAATATCC...AAGAAGAAATTCTGGGGAGGTATGTTGGGAAAGACTATAAGGAGCAGAAGGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR-3UTR GCA 90 bp TGGGGCTGTTTTCCATGTTGCTTTCCTTGCAGGACTTATGCCCAGAAGCAGCGGTGCAGGATCTTGTGCTaGCAATTAAATGCAGGACTT +
Preference number: 2 (lower is better)
Translates to: WGCFPCCFPCRTYAQKQRCRILC*QLNAGL
Trigger: AAGTCCTGCATTTAATTGGCAGCACAAGATCCTGCA...CCGCTGCTTCTGGGCATAAGTCCTGCAAGGAAAGCAACATGGAAAACAGCCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000650871.1
3UTR-3UTR GCA 90 bp TGGCTTTATAAGCATCTGGCATTTCCCCTGCTGGCACTCATTCTCTCTCCTGCTCCATGTTGCTTTCCTTaGAGGACTTATGCCCAGAAG +
Preference number: 2 (lower is better)
Translates to: WLYKHLAFPLLALILSPAPCCFP*RTYAQK
Trigger: CTTCTGGGCATAAGTCCTGCAAGGAAAGCAACATGG...AGCAGGAGAGAGAATGAGTGCCAGCAGGGGAAATGCCAGATGCTTATAAAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
3UTR-3UTR GCA 90 bp AATTCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCGGCTTAAACAACACATaGCTTTCTCAAGAGTGCTTT +
Preference number: 2 (lower is better)
Translates to: NSSCKSLARTCVTALPKPGLNNT*LSQECF
Trigger: AAAGCACTCTTGAGAAAGGCATGTGTTGTTTAAGCC...GGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000650871.1
3UTR-3UTR GCA 90 bp TGGAAATCCCCTTGCCCATGCAAGATAAGTTTATCCAACCTGCACTCGAAACTCCCATGGAGCCTTCTGTaGACTGTGGTGAGACCGAAA +
Preference number: 2 (lower is better)
Translates to: WKSPCPCKISLSNLHSKLPWSLL*TVVRPK
Trigger: TTTCGGTCTCACCACAGTGCACAGAAGGCTCCATGG...GAGTTTCGAGTGCAGGTTGGATAAACTTATCTTGCATGGGCAAGGGGATTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR-3UTR CCA 90 bp TTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACGTCAAAGAAAGACGATaGCAGATTTCATTACATTCC +
Preference number: 2 (lower is better)
Translates to: LQIIGQNLCHGPAQAPKDVKERR*QISLHS
Trigger: GGAATGTAATGAAATCTGCCATCGTCTTTCTTTGAC...GTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505127.5
ENST00000509722.5
3UTR-3UTR GCA 90 bp TTGTGTCCCCACCCAAATCTCATCTCGAATTGTAGTCCCATAATTCCCATGTGTGAGGGAAAGAGGCTCTaGAGGATCTTGTGCTGCCAA +
Preference number: 2 (lower is better)
Translates to: LCPHPNLISNCSPIIPMCEGKRL*RILCCQ
Trigger: TTGGCAGCACAAGATCCTGCAGAGCCTCTTTCCCTC...ACACATGGGAATTATGGGACTACAATTCGAGATGAGATTTGGGTGGGGACACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
3UTR-3UTR GCA 90 bp CCAGATGTTCTTTGCCAGGCTCTTTTCTGGCTGACCTGTCGTCAACGTGATAATTGTATACAGACCGACTaGACCAGGACCTTGTCACTT +
Preference number: 2 (lower is better)
Translates to: PDVLCQALFWLTCRQRDNCIQTD*TRTLSL
Trigger: AAGTGACAAGGTCCTGGTGCAGTCGGTCTGTATACA...ATTATCACGTTGACGACAGGTCAGCCAGAAAAGAGCCTGGCAAAGAACATCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR-3UTR CCA 90 bp GCCCCTTCTGCTCCTTATAGTCTTTCCCAACATACCTCCCCAGAATTTCTTCTTCCTCTTGCAAATCATTaGCCAGAACCTGTGTCACGG +
Preference number: 2 (lower is better)
Translates to: APSAPYSLSQHTSPEFLLPLANH*PEPVSR
Trigger: CCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGG...AAGAAGAAATTCTGGGGAGGTATGTTGGGAAAGACTATAAGGAGCAGAAGGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505127.5
ENST00000509722.5
3UTR-3UTR CCA 90 bp TGGCATTTCCCCTGCTGGCACTCATTCTCTCTCCTGCTACCCTATGAAGAGGTGCCATCAAGGACAGACTaGATAAAGAAAACTGTACCA +
Preference number: 2 (lower is better)
Translates to: WHFPCWHSFSLLLPYEEVPSRTD*IKKTVP
Trigger: TGGTACAGTTTTCTTTATCCAGTCTGTCCTTGATGG...CACCTCTTCATAGGGTAGCAGGAGAGAGAATGAGTGCCAGCAGGGGAAATGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
3UTR-3UTR CCA 90 bp AAGCAGCGGTCTCCTGACCCATTCTTGATAACTGTGGCAGAGGGAAAGAGGCTCCCATCAAGGACAGACTaGATAAAGAAAACTGTACCA +
Preference number: 2 (lower is better)
Translates to: KQRSPDPFLITVAEGKRLPSRTD*IKKTVP
Trigger: TGGTACAGTTTTCTTTATCCAGTCTGTCCTTGATGG...GAGCCTCTTTCCCTCTGCCACAGTTATCAAGAATGGGTCAGGAGACCGCTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
3UTR-3UTR CCA 90 bp TTCATAGAGTCTCTTGTTAAATTCTGTCACATAGTGCTGTGCGGTCATCTGTCGTCCACATCAGTGAAGTaGTGCCAGAGCCCCTTCTGC +
Preference number: 2 (lower is better)
Translates to: FIESLVKFCHIVLCGHLSSTSVK*CQSPFC
Trigger: GCAGAAGGGGCTCTGGCACCACTTCACTGATGTGGA...CGACAGATGACCGCACAGCACTATGTGACAGAATTTAACAAGAGACTCTATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505127.5
ENST00000509722.5
3UTR CAA 90 bp GGCTCATCATCTCTCTTGGTGAGGAGGCCAATCTCAAAGGCCTCTTaGGCTTCACACAGATGTAAGTTTTTCAATTCTGGAGGACAGTCA +
Preference number: 2 (lower is better)
Translates to: GSSSLLVRRPISKAS*ASHRCKFFNSGGQS
Trigger: TGACTGTCCTCCAGAATTGAAAAACTTACATCTGTGTGAAGCCAAAGAGGCCTTTGAGATTGGCCTCCTCACCAAGAGAGATGATGAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR-3UTR GCA 90 bp GCAGAGGGAAAGAGGCTCTGCAGGATCTTGTGCTGCCAATTAAATGCAGGACTTTGCAGGATCTTGTGCTaGCAATTAAATGCAGGACTT +
Preference number: 2 (lower is better)
Translates to: AEGKRLCRILCCQLNAGLCRILC*QLNAGL
Trigger: AAGTCCTGCATTTAATTGGCAGCACAAGATCCTGCA...AAGTCCTGCATTTAATTGGCAGCACAAGATCCTGCAGAGCCTCTTTCCCTCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
3UTR-3UTR GCA 90 bp TGTAGTCCGATGGCTCAGTCTCAGTCTCCACATCTTGATCCAAGGAGACTCGAATGCAGGATCTTGTGCTaGCAATTAAATGCAGGACTT +
Preference number: 2 (lower is better)
Translates to: CSPMAQSQSPHLDPRRLECRILC*QLNAGL
Trigger: AAGTCCTGCATTTAATTGGCAGCACAAGATCCTGCA...TTCGAGTCTCCTTGGATCAAGATGTGGAGACTGAGACTGAGCCATCGGACTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR-3UTR GCA 90 bp TTGTGTCCCCACCCAAATCTCATCTCGAATTGTAGTCCCATAATTCCCATGTGTATCTGGCATTTCCCCTaGTGGCACTCATTCTCTCTC +
Preference number: 2 (lower is better)
Translates to: LCPHPNLISNCSPIIPMCIWHFP*WHSFSL
Trigger: GAGAGAGAATGAGTGCCAGCAGGGGAAATGCCAGAT...ACACATGGGAATTATGGGACTACAATTCGAGATGAGATTTGGGTGGGGACACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
3UTR-3UTR CCA 90 bp AAGCAGCGGTCTCCTGACCCATTCTTGATAACTGTGGCAGAGGGAAAGAGGCTCGCTCTAAAATCTCAATaGCTTAAACAACACATGCCT +
Preference number: 2 (lower is better)
Translates to: KQRSPDPFLITVAEGKRLALKSQ*LKQHMP
Trigger: AGGCATGTGTTGTTTAAGCCATTGAGATTTTAGAGC...GAGCCTCTTTCCCTCTGCCACAGTTATCAAGAATGGGTCAGGAGACCGCTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000650871.1
3UTR-3UTR CCA 90 bp TTCATAGAGTCTCTTGTTAAATTCTGTCACATAGTGCTGTGCGGTCATCTGTCGGTATACCTAGCGACGTaGAGAGGCCCTTTTTATCCG +
Preference number: 2 (lower is better)
Translates to: FIESLVKFCHIVLCGHLSVYLAT*RGPFYP
Trigger: CGGATAAAAAGGGCCTCTCCACGTCGCTAGGTATAC...CGACAGATGACCGCACAGCACTATGTGACAGAATTTAACAAGAGACTCTATGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR-3UTR CCA 90 bp GCCCCTTCTGCTCCTTATAGTCTTTCCCAACATACCTCCCCAGAATTTCTTCTTAAGGCTTCTTCTTTTTaGACTGAAGGATGTGTGCCC +
Preference number: 2 (lower is better)
Translates to: APSAPYSLSQHTSPEFLLKASSF*TEGCVP
Trigger: GGGCACACATCCTTCAGTCCAAAAAGAAGAAGCCTT...AAGAAGAAATTCTGGGGAGGTATGTTGGGAAAGACTATAAGGAGCAGAAGGGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR CAA 90 bp TCAAAGGCTTCTTCTTTTTGGACTGAAGGATGTGTGCCCATATTCTaGGGCCTACCAGAATCAGAAGACCAAGAAGCAGAACGATATGAG +
Preference number: 2 (lower is better)
Translates to: SKASSFWTEGCVPIF*GLPESEDQEAERYE
Trigger: CTCATATCGTTCTGCTTCTTGGTCTTCTGATTCTGGTAGGCCCAAGAATATGGGCACACATCCTTCAGTCCAAAAAGAAGAAGCCTTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR-3UTR TCA 90 bp TGGCTTTATAAGCATCTGGCATTTCCCCTGCTGGCACTCATTCTCTCTCCTGCTGACAGGAAAACAAATTaGATTCGTATCACAAAGGCT +
Preference number: 2 (lower is better)
Translates to: WLYKHLAFPLLALILSPADRKTN*IRITKA
Trigger: AGCCTTTGTGATACGAATTCAATTTGTTTTCCTGTC...AGCAGGAGAGAGAATGAGTGCCAGCAGGGGAAATGCCAGATGCTTATAAAGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
3UTR-3UTR TCA 90 bp GACTGTGCCGTATTCTATGTGCATGGTTTCTCCATTGAAGGTCTAGTCAAAGAACCCTTTTTATCCGGCTaGGGAAGTGCCAAATATCCT +
Preference number: 2 (lower is better)
Translates to: DCAVFYVHGFSIEGLVKEPFLSG*GSAKYP
Trigger: AGGATATTTGGCACTTCCTCAGCCGGATAAAAAGGG...TTCTTTGACTAGACCTTCAATGGAGAAACCATGCACATAGAATACGGCACAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR-3UTR GCA 90 bp CTAAAATCAGTAGTATTGTGGATGGGATGTAGAATATCTGGGTGGGAATGTTTTATGCTGTCGAGCAGTTaGCCCTCCTCATCCACTGTG +
Preference number: 2 (lower is better)
Translates to: LKSVVLWMGCRISGWECFMLSSS*PSSSTV
Trigger: CACAGTGGATGAGGAGGGGCAACTGCTCGACAGCAT...AAAACATTCCCACCCAGATATTCTACATCCCATCCACAATACTACTGATTTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR-3UTR GCA 90 bp TTGTGTCCCCACCCAAATCTCATCTCGAATTGTAGTCCCATAATTCCCATGTGTGGCTGTTTTCCATGTTaGTTTCCTTGCAGGACTTAT +
Preference number: 2 (lower is better)
Translates to: LCPHPNLISNCSPIIPMCGCFPC*FPCRTY
Trigger: ATAAGTCCTGCAAGGAAAGCAACATGGAAAACAGCC...ACACATGGGAATTATGGGACTACAATTCGAGATGAGATTTGGGTGGGGACACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
3UTR-3UTR GCA 90 bp GCCCCTTCTGCTCCTTATAGTCTTTCCCAACATACCTCCCCAGAATTTCTTCTTAAATCCCCTTGCCCATaGAAGATAAGTTTATCCAAC +
Preference number: 2 (lower is better)
Translates to: APSAPYSLSQHTSPEFLLKSPCP*KISLSN
Trigger: GTTGGATAAACTTATCTTGCATGGGCAAGGGGATTT...AAGAAGAAATTCTGGGGAGGTATGTTGGGAAAGACTATAAGGAGCAGAAGGGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR-3UTR GCA 90 bp CATTTCTGTACAGCCAGGTACCCGTTGCTCCATTGTTGCTTATTAGACTGCTCACTAAGACTGATATATTaGAGCAGGAACTGTAACCTC +
Preference number: 2 (lower is better)
Translates to: HFCTARYPLLHCCLLDCSLRLIY*SRNCNL
Trigger: GAGGTTACAGTTCCTGCTGCAATATATCAGTCTTAG...TGAGCAGTCTAATAAGCAACAATGGAGCAACGGGTACCTGGCTGTACAGAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515330.5
3UTR-3UTR CCA 90 bp TGGCTTTATAAGCATCTGGCATTTCCCCTGCTGGCACTCATTCTCTCTCCTGCTACACATAGTGTTCCATaGTGTATATGTACCACATTT +
Preference number: 2 (lower is better)
Translates to: WLYKHLAFPLLALILSPATHSVP*CICTTF
Trigger: AAATGTGGTACATATACACCATGGAACACTATGTGT...AGCAGGAGAGAGAATGAGTGCCAGCAGGGGAAATGCCAGATGCTTATAAAGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
3UTR CAA 90 bp ACCTGCACTCGAAACTCTCGGGAACATAAGATCTGTCATCTACATTaGAGAAGCTTTGAACTTGTAAATGTTCCTTCACCTGGGCAATCA +
Preference number: 2 (lower is better)
Translates to: TCTRNSREHKICHLH*RSFELVNVPSPGQS
Trigger: TGATTGCCCAGGTGAAGGAACATTTACAAGTTCAAAGCTTCTCAAATGTAGATGACAGATCTTATGTTCCCGAGAGTTTCGAGTGCAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR-3UTR GCA 90 bp TCATTTCTGTACAGCCAGGTACCCGTTGCTCCATTGTTGCTTATTAGACTGCTCAAAGCAGCAACCAAATaGCACACAATTAGCTTTGAA +
Preference number: 2 (lower is better)
Translates to: SFLYSQVPVAPLLLIRLLKAATK*HTISFE
Trigger: TTCAAAGCTAATTGTGTGGCATTTGGTTGCTGCTTT...GAGCAGTCTAATAAGCAACAATGGAGCAACGGGTACCTGGCTGTACAGAAATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515330.5
3UTR-3UTR TCA 90 bp CCTGAGGTCTCCCCAGCCATGTGGAACTGTGAGTTAATTAAACCTCTTTTCTTTGACAGGAAAACAAATTaGATTCGTATCACAAAGGCT +
Preference number: 2 (lower is better)
Translates to: PEVSPAMWNCELIKPLFFDRKTN*IRITKA
Trigger: AGCCTTTGTGATACGAATTCAATTTGTTTTCCTGTC...AAAGAAAAGAGGTTTAATTAACTCACAGTTCCACATGGCTGGGGAGACCTCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
3UTR-3UTR TCA 90 bp TATTGTGGATGGGATGTAGAATATCTGGGTGGGAATGTTTTGTTCATAGAGTCTTCAGTCTCCACATCTTaGTCCAAGGAGACTCGAAAT +
Preference number: 2 (lower is better)
Translates to: YCGWDVEYLGGNVLFIESSVSTS*SKETRN
Trigger: ATTTCGAGTCTCCTTGGATCAAGATGTGGAGACTGA...AGACTCTATGAACAAAACATTCCCACCCAGATATTCTACATCCCATCCACAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR-3UTR GCA 90 bp AAACTCATAAGAAAAATGGCCATAGGCCAAGCCATATTCTGTGGCTTTGTATTCTGCCTTTCTCAAGAGTaGTTTTCATCCCTCATGGGT +
Preference number: 2 (lower is better)
Translates to: KLIRKMAIGQAIFCGFVFCLSQE*FSSLMG
Trigger: ACCCATGAGGGATGAAAAGCACTCTTGAGAAAGGCA...GAATACAAAGCCACAGAATATGGCTTGGCCTATGGCCATTTTTCTTATGAGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505127.5
3UTR-3UTR GCA 90 bp CATAAGAAAAATGGCCATAGGCCAAGCCATATTCTGTGGCTTTGTATTCTGTTTTGTGAATGCAATGAATaGATAGCTCTGCCTTCCCTG +
Preference number: 2 (lower is better)
Translates to: HKKNGHRPSHILWLCILFCECNE*IALPSL
Trigger: CAGGGAAGGCAGAGCTATGCATTCATTGCATTCACA...AAACAGAATACAAAGCCACAGAATATGGCTTGGCCTATGGCCATTTTTCTTATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR-3UTR TCA 90 bp TATTGTGGATGGGATGTAGAATATCTGGGTGGGAATGTTTTGTTCATAGAGTCTTGTAAGGCTCCACACTaGTACATCCCTTTATTGTCT +
Preference number: 2 (lower is better)
Translates to: YCGWDVEYLGGNVLFIESCKAPH*YIPLLS
Trigger: AGACAATAAAGGGATGTATCAGTGTGGAGCCTTACA...AGACTCTATGAACAAAACATTCCCACCCAGATATTCTACATCCCATCCACAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505127.5
ENST00000509722.5
3UTR-3UTR CCA 90 bp CCTGAGGTCTCCCCAGCCATGTGGAACTGTGAGTTAATTAAACCTCTTTTCTTTACACATAGTGTTCCATaGTGTATATGTACCACATTT +
Preference number: 2 (lower is better)
Translates to: PEVSPAMWNCELIKPLFFTHSVP*CICTTF
Trigger: AAATGTGGTACATATACACCATGGAACACTATGTGT...AAAGAAAAGAGGTTTAATTAACTCACAGTTCCACATGGCTGGGGAGACCTCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
3UTR-3UTR CCA 90 bp TATTGTGGATGGGATGTAGAATATCTGGGTGGGAATGTTTTGTTCATAGAGTCTATATTTCTGACTTCCTaGATACCTTCTGGAGCTCCT +
Preference number: 2 (lower is better)
Translates to: YCGWDVEYLGGNVLFIESIFLTS*IPSGAP
Trigger: AGGAGCTCCAGAAGGTATCCAGGAAGTCAGAAATAT...AGACTCTATGAACAAAACATTCCCACCCAGATATTCTACATCCCATCCACAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR-3UTR CCA 90 bp CATAAGAAAAATGGCCATAGGCCAAGCCATATTCTGTGGCTTTGTATTCTGTTTGCTCTAAAATCTCAATaGCTTAAACAACACATGCCT +
Preference number: 2 (lower is better)
Translates to: HKKNGHRPSHILWLCILFALKSQ*LKQHMP
Trigger: AGGCATGTGTTGTTTAAGCCATTGAGATTTTAGAGC...AAACAGAATACAAAGCCACAGAATATGGCTTGGCCTATGGCCATTTTTCTTATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505127.5
3UTR-3UTR CCA 90 bp CATAAGAAAAATGGCCATAGGCCAAGCCATATTCTGTGGCTTTGTATTCTGTTTGTCTCTTTGACAATGTaGCTTTTCTTGAGTAGTACT +
Preference number: 2 (lower is better)
Translates to: HKKNGHRPSHILWLCILFVSLTM*LFLSST
Trigger: AGTACTACTCAAGAAAAGCCACATTGTCAAAGAGAC...AAACAGAATACAAAGCCACAGAATATGGCTTGGCCTATGGCCATTTTTCTTATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR-3UTR CCA 90 bp CTAAAATCAGTAGTATTGTGGATGGGATGTAGAATATCTGGGTGGGAATGTTTTCCAAGCCATATTCTGTaGCTTTGTATTCTGTTTTCA +
Preference number: 2 (lower is better)
Translates to: LKSVVLWMGCRISGWECFPSHIL*LCILFS
Trigger: TGAAAACAGAATACAAAGCCACAGAATATGGCTTGG...AAAACATTCCCACCCAGATATTCTACATCCCATCCACAATACTACTGATTTTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000505127.5
ENST00000509722.5
3UTR GCA 72 bp GCCCCTCCTCATCCACTGTGGAGGCATCAGGGTCGATaGCCTGCTCTGCGACTGGGCCACCACTTTTTCTGG +
Preference number: 3 (lower is better)
Translates to: APPHPLWRHQGR*PALRLGHHFFW
Trigger: CCAGAAAAAGTGGTGGCCCAGTCGCAGAGCAGGGCATCGACCCTGATGCCTCCACAGTGGATGAGGAGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR CCA 72 bp CCATGCTGTCGAGCAGTTGCCCCTCCTCATCCACTGTaGAGGCATCAGGGTCGATGCCCTGCTCTGCGACTG +
Preference number: 3 (lower is better)
Translates to: PCCRAVAPPHPL*RHQGRCPALRL
Trigger: CAGTCGCAGAGCAGGGCATCGACCCTGATGCCTCCACAGTGGATGAGGAGGGGCAACTGCTCGACAGCATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR GCA 72 bp GGGTCTCCGCCCTCTGACCAGGCGGCTGTCTCAGAATaGACAGTCTATGAGAGCCGTGCCCATTTGTGCAGG +
Preference number: 3 (lower is better)
Translates to: GSPPSDQAAVSE*TVYESRAHLCR
Trigger: CCTGCACAAATGGGCACGGCTCTCATAGACTGTGCATTCTGAGACAGCCGCCTGGTCAGAGGGCGGAGACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR GCA 72 bp GAGCACGAAGAGCGGCGTATAGGCACTGAAGGCAGCTaGCAGCTTGCAGGCTTCTGCAGCGGACAGCAAATG +
Preference number: 3 (lower is better)
Translates to: EHEERRIGTEGS*QLAGFCSGQQM
Trigger: CATTTGCTGTCCGCTGCAGAAGCCTGCAAGCTGGCAGCTGCCTTCAGTGCCTATACGCCGCTCTTCGTGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR GCA 72 bp CCATTTGTGCAGGGAACATCCATGCTGTCGAGCAGTTaGCCCTCCTCATCCACTGTGGAGGCATCAGGGTCG +
Preference number: 3 (lower is better)
Translates to: PFVQGTSMLSSS*PSSSTVEASGS
Trigger: CGACCCTGATGCCTCCACAGTGGATGAGGAGGGGCAACTGCTCGACAGCATGGATGTTCCCTGCACAAATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR GCA 72 bp CTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTaGCCAAGCCCCAAAGGACCAGACTGTGCCGTATTC +
Preference number: 3 (lower is better)
Translates to: LANHWPEPVSRP*PSPKGPDCAVF
Trigger: GAATACGGCACAGTCTGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505127.5
ENST00000509722.5
3UTR GCA 72 bp TATGAGAGCCGTGCCCATTTGTGCAGGGAACATCCATaGTGTCGAGCAGTTGCCCCTCCTCATCCACTGTGG +
Preference number: 3 (lower is better)
Translates to: YESRAHLCREHP*CRAVAPPHPLW
Trigger: CCACAGTGGATGAGGAGGGGCAACTGCTCGACAGCATGGATGTTCCCTGCACAAATGGGCACGGCTCTCATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR-3UTR CAA 90 bp GCTTACAGAGGAATTGGGGGTCTCCGCCCTCTGACCAGGCGGCTGTCTCAGAATTTCCCCTGCCTGTCTTaGACATCGCAGTTGGTTTCT +
Preference number: 3 (lower is better)
Translates to: AYRGIGGLRPLTRRLSQNFPCLS*TSQLVS
Trigger: AGAAACCAACTGCGATGTCAAAGACAGGCAGGGGAA...ATTCTGAGACAGCCGCCTGGTCAGAGGGCGGAGACCCCCAATTCCTCTGTAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR GCA 72 bp ATAGGCACTGAAGGCAGCTGCCAGCTTGCAGGCTTCTaGAGCGGACAGCAAATGGTGGTCAAACTCCTTCAG +
Preference number: 3 (lower is better)
Translates to: IGTEGSCQLAGF*SGQQMVVKLLQ
Trigger: CTGAAGGAGTTTGACCACCATTTGCTGTCCGCTGCAGAAGCCTGCAAGCTGGCAGCTGCCTTCAGTGCCTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR CCA 72 bp TCTCCCTCCTCCCACTGTCCACCCTCTGATAAGCCCTaGTGTGTGTTGTTCCCTCTATGTGTCCACCTACTC +
Preference number: 3 (lower is better)
Translates to: SPSSHCPPSDKP*CVLFPLCVHLL
Trigger: GAGTAGGTGGACACATAGAGGGAACAACACACACCAGGGCTTATCAGAGGGTGGACAGTGGGAGGAGGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
3UTR-3UTR CAA 90 bp CCTCTGACCAGGCGGCTGTCTCAGAATGCACAGTCTATGAGAGCCGTGCCCATTTCCACCAGATGTTCTTaGCCAGGCTCTTTTCTGGCT +
Preference number: 3 (lower is better)
Translates to: PLTRRLSQNAQSMRAVPISTRCS*PGSFLA
Trigger: AGCCAGAAAAGAGCCTGGCAAAGAACATCTGGTGGA...AATGGGCACGGCTCTCATAGACTGTGCATTCTGAGACAGCCGCCTGGTCAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR TCA 72 bp CATAGTGCTGTGCGGTCATCTGTCGCTCCACATCAGTaGAGTGGTGCCAGAGCCCCTTCTGCTCCTTATAGT +
Preference number: 3 (lower is better)
Translates to: HSAVRSSVAPHQ*SGARAPSAPYS
Trigger: ACTATAAGGAGCAGAAGGGGCTCTGGCACCACTTCACTGATGTGGAGCGACAGATGACCGCACAGCACTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505127.5
ENST00000509722.5
3UTR GCA 72 bp TGGGTGAGTTGGGGCTGTTTTCCATGTTGCTTTCCTTaGAGGACTTATGCCCAGAAGCAGCGGTCTCCTGAC +
Preference number: 3 (lower is better)
Translates to: WVSWGCFPCCFP*RTYAQKQRSPD
Trigger: GTCAGGAGACCGCTGCTTCTGGGCATAAGTCCTGCAAGGAAAGCAACATGGAAAACAGCCCCAACTCACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000650871.1
3UTR GCA 72 bp TCAGAATGCACAGTCTATGAGAGCCGTGCCCATTTGTaGAGGGAACATCCATGCTGTCGAGCAGTTGCCCCT +
Preference number: 3 (lower is better)
Translates to: SECTVYESRAHL*REHPCCRAVAP
Trigger: AGGGGCAACTGCTCGACAGCATGGATGTTCCCTGCACAAATGGGCACGGCTCTCATAGACTGTGCATTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR-3UTR CAA 90 bp AATTCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCTCCTCTTGCAAATCATaGGCCAGAACCTGTGTCACG +
Preference number: 3 (lower is better)
Translates to: NSSCKSLARTCVTALPKPSSCKS*ARTCVT
Trigger: CGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGA...GGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
3UTR-3UTR CAA 90 bp CAGCTTGCAGGCTTCTGCAGCGGACAGCAAATGGTGGTCAAACTCCTTCAGCAGTCCTCTTGCAAATCATaGGCCAGAACCTGTGTCACG +
Preference number: 3 (lower is better)
Translates to: QLAGFCSGQQMVVKLLQQSSCKS*ARTCVT
Trigger: CGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGA...CTGCTGAAGGAGTTTGACCACCATTTGCTGTCCGCTGCAGAAGCCTGCAAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR-3UTR CAA 90 bp GCTTACAGAGGAATTGGGGGTCTCCGCCCTCTGACCAGGCGGCTGTCTCAGAATATCTCAAAGGCCTCTTaGGCTTCACACAGATGTAAG +
Preference number: 3 (lower is better)
Translates to: AYRGIGGLRPLTRRLSQNISKAS*ASHRCK
Trigger: CTTACATCTGTGTGAAGCCAAAGAGGCCTTTGAGAT...ATTCTGAGACAGCCGCCTGGTCAGAGGGCGGAGACCCCCAATTCCTCTGTAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR TCA 72 bp TCCTTGCAGGACTTATGCCCAGAAGCAGCGGTCTCCTaGCCCATTCTTGATAACTGTGGCAGAGGGAAAGAG +
Preference number: 3 (lower is better)
Translates to: SLQDLCPEAAVS*PILDNCGRGKE
Trigger: CTCTTTCCCTCTGCCACAGTTATCAAGAATGGGTCAGGAGACCGCTGCTTCTGGGCATAAGTCCTGCAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000650871.1
3UTR TCA 72 bp CGTACCACATCCCCAGCTTTTGCAGAATCTGCCCTCTaGTCTGTATACAGACCGACTGCACCAGGACCTTGT +
Preference number: 3 (lower is better)
Translates to: RTTSPAFAESAL*SVYRPTAPGPC
Trigger: ACAAGGTCCTGGTGCAGTCGGTCTGTATACAGATCAGAGGGCAGATTCTGCAAAAGCTGGGGATGTGGTACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR TCA 72 bp AAATTGTACAGCTTCCCCATTGCTTCCTTACAGAGCTaGCTTGCTGCATGGACCGTCCCTGTCTCCCCATGG +
Preference number: 3 (lower is better)
Translates to: KLYSFPIASLQS*LAAWTVPVSPW
Trigger: CCATGGGGAGACAGGGACGGTCCATGCAGCAAGTCAGCTCTGTAAGGAAGCAATGGGGAAGCTGTACAATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR GCA 72 bp AGGCAGTGGAACACTGAGTGTCCACCAGATGTTCTTTaGCAGGCTCTTTTCTGGCTGACCTGTCGTCAACGT +
Preference number: 3 (lower is better)
Translates to: RQWNTECPPDVL*QALFWLTCRQR
Trigger: ACGTTGACGACAGGTCAGCCAGAAAAGAGCCTGGCAAAGAACATCTGGTGGACACTCAGTGTTCCACTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR CCA 72 bp TCATCTTTCCCGGCAATGAAACCCAAGAACTCCCACTaGAATTCAGATAGGACCAAGGGCTGTCCCCCTCAG +
Preference number: 3 (lower is better)
Translates to: SSFPAMKPKNSH*NSDRTKGCPPQ
Trigger: CTGAGGGGGACAGCCCTTGGTCCTATCTGAATTCCAGTGGGAGTTCTTGGGTTTCATTGCCGGGAAAGATGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR-3UTR CAA 90 bp TGGCATTTCCCCTGCTGGCACTCATTCTCTCTCCTGCTACCCTATGAAGAGGTGTCTCCTGACCCATTCTaGATAACTGTGGCAGAGGGA +
Preference number: 3 (lower is better)
Translates to: WHFPCWHSFSLLLPYEEVSPDPF*ITVAEG
Trigger: TCCCTCTGCCACAGTTATCAAGAATGGGTCAGGAGA...CACCTCTTCATAGGGTAGCAGGAGAGAGAATGAGTGCCAGCAGGGGAAATGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
3UTR-3UTR CAA 90 bp AATTCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCGGGCTGTTTTCCATGTaGCTTTCCTTGCAGGACTTA +
Preference number: 3 (lower is better)
Translates to: NSSCKSLARTCVTALPKPGLFSM*LSLQDL
Trigger: TAAGTCCTGCAAGGAAAGCAACATGGAAAACAGCCC...GGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000650871.1
3UTR-3UTR CAA 90 bp GCAGAGGGAAAGAGGCTCTGCAGGATCTTGTGCTGCCAATTAAATGCAGGACTTTCCCTCATGGGTGAGTaGGGGCTGTTTTCCATGTTG +
Preference number: 3 (lower is better)
Translates to: AEGKRLCRILCCQLNAGLSLMGE*GLFSML
Trigger: CAACATGGAAAACAGCCCCAACTCACCCATGAGGGA...AAGTCCTGCATTTAATTGGCAGCACAAGATCCTGCAGAGCCTCTTTCCCTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000650871.1
3UTR-3UTR CAA 90 bp GAAGAACCACTGGAAAATGCAGGTGATTTCAGCCACCACACTGAGGATGAGCTGCCACATCCCCAGCTTTaGCAGAATCTGCCCTCTGAT +
Preference number: 3 (lower is better)
Translates to: EEPLENAGDFSHHTEDELPHPQL*QNLPSD
Trigger: ATCAGAGGGCAGATTCTGCAAAAGCTGGGGATGTGG...CAGCTCATCCTCAGTGTGGTGGCTGAAATCACCTGCATTTTCCAGTGGTTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR TCA 72 bp CCCCTGCTGGCACTCATTCTCTCTCCTGCTACCCTATaGAGAGGTGCCTTCTGCCATGATTGTAAGTTTCCT +
Preference number: 3 (lower is better)
Translates to: PLLALILSPATL*RGAFCHDCKFP
Trigger: AGGAAACTTACAATCATGGCAGAAGGCACCTCTTCATAGGGTAGCAGGAGAGAGAATGAGTGCCAGCAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
3UTR TCA 72 bp CCCATGTGTCATGGGAAGGACCTGGTAGGAGGTAATTaGGGCAGTTTTTCCCATGCTGTTCTCGTGAGAGTG +
Preference number: 3 (lower is better)
Translates to: PMCHGKDLVGGN*GSFSHAVLVRV
Trigger: CACTCTCACGAGAACAGCATGGGAAAAACTGCCTCAATTACCTCCTACCAGGTCCTTCCCATGACACATGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
3UTR GCA 72 bp TCAGCCACCACACTGAGGATGAGCTGGAGTTCTGGCTaGAGTTTAGCATGTTTCCAGGCTGATTTCCTTCCT +
Preference number: 3 (lower is better)
Translates to: SATTLRMSWSSG*SLACFQADFLP
Trigger: AGGAAGGAAATCAGCCTGGAAACATGCTAAACTGCAGCCAGAACTCCAGCTCATCCTCAGTGTGGTGGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR CCA 72 bp GCTGCCAGCTTGCAGGCTTCTGCAGCGGACAGCAAATaGTGGTCAAACTCCTTCAGCAGGCTCAAATTAATT +
Preference number: 3 (lower is better)
Translates to: AASLQASAADSK*WSNSFSRLKLI
Trigger: AATTAATTTGAGCCTGCTGAAGGAGTTTGACCACCATTTGCTGTCCGCTGCAGAAGCCTGCAAGCTGGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR CCA 72 bp CTTCCCTGTCATTCTCTAGCTCCTCAGACAAGGCAGTaGAACACTGAGTGTCCACCAGATGTTCTTTGCCAG +
Preference number: 3 (lower is better)
Translates to: LPCHSLAPQTRQ*NTECPPDVLCQ
Trigger: CTGGCAAAGAACATCTGGTGGACACTCAGTGTTCCACTGCCTTGTCTGAGGAGCTAGAGAATGACAGGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR GCA 72 bp CTGCCAACAGCTTTTCAAAGTCATCAGGTTGCAAGGTaGGAGCCTCAAGGATCTCTTTCCTCATCTTTCCCG +
Preference number: 3 (lower is better)
Translates to: LPTAFQSHQVAR*EPQGSLSSSFP
Trigger: CGGGAAAGATGAGGAAAGAGATCCTTGAGGCTCGCACCTTGCAACCTGATGACTTTGAAAAGCTGTTGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR GCA 72 bp CTCACTCCTGCCAACAGCTTTTCAAAGTCATCAGGTTaGAAGGTGCGAGCCTCAAGGATCTCTTTCCTCATC +
Preference number: 3 (lower is better)
Translates to: LTPANSFSKSSG*KVRASRISFLI
Trigger: GATGAGGAAAGAGATCCTTGAGGCTCGCACCTTGCAACCTGATGACTTTGAAAAGCTGTTGGCAGGAGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR CCA 72 bp GCCAGCTTGCAGGCTTCTGCAGCGGACAGCAAATGGTaGTCAAACTCCTTCAGCAGGCTCAAATTAATTTGT +
Preference number: 3 (lower is better)
Translates to: ASLQASAADSKW*SNSFSRLKLIC
Trigger: ACAAATTAATTTGAGCCTGCTGAAGGAGTTTGACCACCATTTGCTGTCCGCTGCAGAAGCCTGCAAGCTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR-3UTR CAA 90 bp GAAGAACCACTGGAAAATGCAGGTGATTTCAGCCACCACACTGAGGATGAGCTGTGTGTGCCCATATTCTaGGGCCTACCAGAATCAGAA +
Preference number: 3 (lower is better)
Translates to: EEPLENAGDFSHHTEDELCVPIF*GLPESE
Trigger: TTCTGATTCTGGTAGGCCCAAGAATATGGGCACACA...CAGCTCATCCTCAGTGTGGTGGCTGAAATCACCTGCATTTTCCAGTGGTTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR-3UTR CAA 90 bp GCCAACAGCTTTTCAAAGTCATCAGGTTGCAAGGTGCGAGCCTCAAGGATCTCTTCTGGAGTCAGGATTTaGAACAGGCCAATTAGGGGT +
Preference number: 3 (lower is better)
Translates to: ANSFSKSSGCKVRASRISSGVRI*NRPIRG
Trigger: ACCCCTAATTGGCCTGTTCAAAATCCTGACTCCAGA...AGAGATCCTTGAGGCTCGCACCTTGCAACCTGATGACTTTGAAAAGCTGTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR TCA 72 bp TCATTCTCTAGCTCCTCAGACAAGGCAGTGGAACACTaGGTGTCCACCAGATGTTCTTTGCCAGGCTCTTTT +
Preference number: 3 (lower is better)
Translates to: SFSSSSDKAVEH*VSTRCSLPGSF
Trigger: AAAAGAGCCTGGCAAAGAACATCTGGTGGACACTCAGTGTTCCACTGCCTTGTCTGAGGAGCTAGAGAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR TCA 72 bp CCTACCAGAATCAGAAGACCAAGAAGCAGAACGATATaGGGGTCTGGAGTGAGCAGAAGTATTTCTGGGTCC +
Preference number: 3 (lower is better)
Translates to: PTRIRRPRSRTI*GSGVSRSISGS
Trigger: GGACCCAGAAATACTTCTGCTCACTCCAGACCCTCATATCGTTCTGCTTCTTGGTCTTCTGATTCTGGTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR-3UTR CAA 90 bp AATTCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCAGACAGGAAAACAAATaGAATTCGTATCACAAAGGC +
Preference number: 3 (lower is better)
Translates to: NSSCKSLARTCVTALPKPRQENK*NSYHKG
Trigger: GCCTTTGTGATACGAATTCAATTTGTTTTCCTGTCT...GGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000650871.1
3UTR-3UTR CAA 90 bp AAGTTTCCTGAGGTCTCCCCAGCCATGTGGAACTGTGAGTTAATTAAACCTCTTTCCTCTTGCAAATCATaGGCCAGAACCTGTGTCACG +
Preference number: 3 (lower is better)
Translates to: KFPEVSPAMWNCELIKPLSSCKS*ARTCVT
Trigger: CGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGA...AAGAGGTTTAATTAACTCACAGTTCCACATGGCTGGGGAGACCTCAGGAAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
3UTR-3UTR CAA 90 bp TGGCATTTCCCCTGCTGGCACTCATTCTCTCTCCTGCTACCCTATGAAGAGGTGAGACAGGAAAACAAATaGAATTCGTATCACAAAGGC +
Preference number: 3 (lower is better)
Translates to: WHFPCWHSFSLLLPYEEVRQENK*NSYHKG
Trigger: GCCTTTGTGATACGAATTCAATTTGTTTTCCTGTCT...CACCTCTTCATAGGGTAGCAGGAGAGAGAATGAGTGCCAGCAGGGGAAATGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
3UTR-3UTR CAA 90 bp CCAGATGTTCTTTGCCAGGCTCTTTTCTGGCTGACCTGTCGTCAACGTGATAATCACAGACATAACTTCTaGAGACAGAGCTTCTCTGTC +
Preference number: 3 (lower is better)
Translates to: PDVLCQALFWLTCRQRDNHRHNF*RQSFSV
Trigger: GACAGAGAAGCTCTGTCTCAAGAAGTTATGTCTGTG...ATTATCACGTTGACGACAGGTCAGCCAGAAAAGAGCCTGGCAAAGAACATCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR TCA 72 bp ACTGTGGTGAGACCGAAAGCAGCTTTGACAAAGCTGTaGAGCTCCTGTTTTCCAGTAACAGGCTCATCATCT +
Preference number: 3 (lower is better)
Translates to: TVVRPKAALTKL*SSCFPVTGSSS
Trigger: AGATGATGAGCCTGTTACTGGAAAACAGGAGCTTCACAGCTTTGTCAAAGCTGCTTTCGGTCTCACCACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR GCA 72 bp ACTGTGGCAGAGGGAAAGAGGCTCTGCAGGATCTTGTaGTGCCAATTAAATGCAGGACTTAAAGTGATACTG +
Preference number: 3 (lower is better)
Translates to: TVAEGKRLCRIL*CQLNAGLKVIL
Trigger: CAGTATCACTTTAAGTCCTGCATTTAATTGGCAGCACAAGATCCTGCAGAGCCTCTTTCCCTCTGCCACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
3UTR GCA 72 bp CCATTCTTGATAACTGTGGCAGAGGGAAAGAGGCTCTaGAGGATCTTGTGCTGCCAATTAAATGCAGGACTT +
Preference number: 3 (lower is better)
Translates to: PFLITVAEGKRL*RILCCQLNAGL
Trigger: AAGTCCTGCATTTAATTGGCAGCACAAGATCCTGCAGAGCCTCTTTCCCTCTGCCACAGTTATCAAGAATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000650871.1
3UTR GCA 72 bp AGATCTGATGGCTTTATAAGCATCTGGCATTTCCCCTaGTGGCACTCATTCTCTCTCCTGCTACCCTATGAA +
Preference number: 3 (lower is better)
Translates to: RSDGFISIWHFP*WHSFSLLLPYE
Trigger: TTCATAGGGTAGCAGGAGAGAGAATGAGTGCCAGCAGGGGAAATGCCAGATGCTTATAAAGCCATCAGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
3UTR GCA 72 bp GGTACATGTGCAGGTTTGTGTCATGGGGGTTTGTTGTaGGAATTACTTCATCACCCAGGTATTCAGCCTAGT +
Preference number: 3 (lower is better)
Translates to: GTCAGLCHGGLL*ELLHHPGIQPS
Trigger: ACTAGGCTGAATACCTGGGTGATGAAGTAATTCGCACAACAAACCCCCATGACACAAACCTGCACATGTACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
3UTR CCA 72 bp TTTCTCAAGAGTGCTTTTCATCCCTCATGGGTGAGTTaGGGCTGTTTTCCATGTTGCTTTCCTTGCAGGACT +
Preference number: 3 (lower is better)
Translates to: FLKSAFHPSWVS*GCFPCCFPCRT
Trigger: AGTCCTGCAAGGAAAGCAACATGGAAAACAGCCCCAACTCACCCATGAGGGATGAAAAGCACTCTTGAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000650871.1
3UTR CCA 72 bp ATGAGGCGAGAAGGGTGTCAAGGGCATCTGTTGCTGTaGCTGATTTTGAGAAGGCTCCAAATTGTCATTGTT +
Preference number: 3 (lower is better)
Translates to: MRREGCQGHLLL*LILRRLQIVIV
Trigger: AACAATGACAATTTGGAGCCTTCTCAAAATCAGCCACAGCAACAGATGCCCTTGACACCCTTCTCGCCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR GCA 72 bp AATGCAGGACTTAAAGTGATACTGATCAATTCCTCTTaGAAATCATTGGCCAGAACCTGTGTCACGGCCCTG +
Preference number: 3 (lower is better)
Translates to: NAGLKVILINSS*KSLARTCVTAL
Trigger: CAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAGTATCACTTTAAGTCCTGCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
3UTR GCA 72 bp CTCAATGGCTTAAACAACACATGCCTTTCTCAAGAGTaGTTTTCATCCCTCATGGGTGAGTTGGGGCTGTTT +
Preference number: 3 (lower is better)
Translates to: LNGLNNTCLSQE*FSSLMGELGLF
Trigger: AAACAGCCCCAACTCACCCATGAGGGATGAAAAGCACTCTTGAGAAAGGCATGTGTTGTTTAAGCCATTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000650871.1
3UTR GCA 72 bp ATAGAGTCTCTTGTTAAATTCTGTCACATAGTGCTGTaGGGTCATCTGTCGCTCCACATCAGTGAAGTGGTG +
Preference number: 3 (lower is better)
Translates to: IESLVKFCHIVL*GHLSLHISEVV
Trigger: CACCACTTCACTGATGTGGAGCGACAGATGACCGCACAGCACTATGTGACAGAATTTAACAAGAGACTCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505127.5
ENST00000509722.5
3UTR CCA 72 bp TTTTATCCGGCTGAGGAAGTGCCAAATATCCTACAATaGAGGCCCATATTAACTCTGCTGCTTCGTACCACA +
Preference number: 3 (lower is better)
Translates to: FYPAEEVPNILQ*RPILTLLLRTT
Trigger: TGTGGTACGAAGCAGCAGAGTTAATATGGGCCTCCATTGTAGGATATTTGGCACTTCCTCAGCCGGATAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR CCA 72 bp CTTCTTTTTGGACTGAAGGATGTGTGCCCATATTCTTaGGCCTACCAGAATCAGAAGACCAAGAAGCAGAAC +
Preference number: 3 (lower is better)
Translates to: LLFGLKDVCPYS*AYQNQKTKKQN
Trigger: GTTCTGCTTCTTGGTCTTCTGATTCTGGTAGGCCCAAGAATATGGGCACACATCCTTCAGTCCAAAAAGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR-3UTR CAA 90 bp GACTGTGCCGTATTCTATGTGCATGGTTTCTCCATTGAAGGTCTAGTCAAAGAAGAGGAAGTGCTGAAATaGTACAGCTTCCCCATTGCT +
Preference number: 3 (lower is better)
Translates to: DCAVFYVHGFSIEGLVKEEEVLK*YSFPIA
Trigger: AGCAATGGGGAAGCTGTACAATTTCAGCACTTCCTC...TTCTTTGACTAGACCTTCAATGGAGAAACCATGCACATAGAATACGGCACAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR CCA 72 bp AATCAGAAGACCAAGAAGCAGAACGATATGAGGGTCTaGAGTGAGCAGAAGTATTTCTGGGTCCCATATTTC +
Preference number: 3 (lower is better)
Translates to: NQKTKKQNDMRV*SEQKYFWVPYF
Trigger: GAAATATGGGACCCAGAAATACTTCTGCTCACTCCAGACCCTCATATCGTTCTGCTTCTTGGTCTTCTGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR-3UTR CAA 90 bp AAAATAATGGCCTCCAGCTCTATCCATGTCCCTGCAAAGGACATGATCTCATTCCCAGTAGTATCAGTCTaGACAGATAGTGACAAAAAG +
Preference number: 3 (lower is better)
Translates to: KIMASSSIHVPAKDMISFPVVSV*TDSDKK
Trigger: CTTTTTGTCACTATCTGTCAAGACTGATACTACTGG...GAATGAGATCATGTCCTTTGCAGGGACATGGATAGAGCTGGAGGCCATTATTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
3UTR-3UTR CAA 90 bp CATTTCTGTACAGCCAGGTACCCGTTGCTCCATTGTTGCTTATTAGACTGCTCAGCCACACAATTAGCTTaGAACATGCACTTAACAATT +
Preference number: 3 (lower is better)
Translates to: HFCTARYPLLHCCLLDCSATQLA*NMHLTI
Trigger: AATTGTTAAGTGCATGTTCAAAGCTAATTGTGTGGC...TGAGCAGTCTAATAAGCAACAATGGAGCAACGGGTACCTGGCTGTACAGAAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515330.5
3UTR GCA 72 bp CATTTCTGTACAGCCAGGTACCCGTTGCTCCATTGTTaGTTATTAGACTGCTCAGAATATACTCTGCTTTTA +
Preference number: 3 (lower is better)
Translates to: HFCTARYPLLHC*LLDCSEYTLLL
Trigger: TAAAAGCAGAGTATATTCTGAGCAGTCTAATAAGCAACAATGGAGCAACGGGTACCTGGCTGTACAGAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515330.5
3UTR-3UTR CAA 90 bp GATTGTAAGTTTCCTGAGGTCTCCCCAGCCATGTGGAACTGTGAGTTAATTAAACCAGTAGTATCAGTCTaGACAGATAGTGACAAAAAG +
Preference number: 3 (lower is better)
Translates to: DCKFPEVSPAMWNCELIKPVVSV*TDSDKK
Trigger: CTTTTTGTCACTATCTGTCAAGACTGATACTACTGG...TTTAATTAACTCACAGTTCCACATGGCTGGGGAGACCTCAGGAAACTTACAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
3UTR CCA 72 bp TTATCCAGTCTACCTAAATGCCCATCAAGGACAGACTaGATAAAGAAAACTGTACCACTCTTCCATCTTACT +
Preference number: 3 (lower is better)
Translates to: LSSLPKCPSRTD*IKKTVPLFHLT
Trigger: AGTAAGATGGAAGAGTGGTACAGTTTTCTTTATCCAGTCTGTCCTTGATGGGCATTTAGGTAGACTGGATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
3UTR CCA 72 bp CATGATTGTAAGTTTCCTGAGGTCTCCCCAGCCATGTaGAACTGTGAGTTAATTAAACCTCTTTTCTTTCTA +
Preference number: 3 (lower is better)
Translates to: HDCKFPEVSPAM*NCELIKPLFFL
Trigger: TAGAAAGAAAAGAGGTTTAATTAACTCACAGTTCCACATGGCTGGGGAGACCTCAGGAAACTTACAATCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
3UTR TCA 72 bp TCCACCTACTCTCATCACTTAGCTCTCACCTATAAGTaGGAACAAGTGGTATTTAGTTTTCTGTTCTTGCAT +
Preference number: 3 (lower is better)
Translates to: STYSHHLALTYK*EQVVFSFLFLH
Trigger: ATGCAAGAACAGAAAACTAAATACCACTTGTTCTCACTTATAGGTGAGAGCTAAGTGATGAGAGTAGGTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR TCA 90 bp CAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGGGGGTCTCCGCCCTCTaGCCAGGCGGCTGTCTCAGA +
Preference number: 4 (lower is better)
Translates to: QIIGQNLCHGPAQAPKDQGVSAL*PGGCLR
Trigger: TCTGAGACAGCCGCCTGGTCAGAGGGCGGAGACCCC...CTGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR TCA 90 bp CAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGACTGTGCCGTATGCGGCGTATAGGCACTaGAGGCAGCTGCCAGCTTGC +
Preference number: 4 (lower is better)
Translates to: QNLCHGPAQAPKDQTVPYAAYRH*RQLPAC
Trigger: GCAAGCTGGCAGCTGCCTTCAGTGCCTATACGCCGC...ATACGGCACAGTCTGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR TCA 90 bp TTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACGGGGTCTCCGCCCTCTaGCCAGGCGGCTGTCTCAGA +
Preference number: 4 (lower is better)
Translates to: LQIIGQNLCHGPAQAPKDGVSAL*PGGCLR
Trigger: TCTGAGACAGCCGCCTGGTCAGAGGGCGGAGACCCC...GTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR TCA 90 bp TCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAGGGGTCTCCGCCCTCTaGCCAGGCGGCTGTCTCAGA +
Preference number: 4 (lower is better)
Translates to: SSCKSLARTCVTALPKPQGVSAL*PGGCLR
Trigger: TCTGAGACAGCCGCCTGGTCAGAGGGCGGAGACCCC...TTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp GCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCATCAGGGTCGATGCCCTaGTCTGCGACTGGGCCACCA +
Preference number: 4 (lower is better)
Translates to: ANHWPEPVSRPCPSPKGPSGSMP*SATGPP
Trigger: TGGTGGCCCAGTCGCAGAGCAGGGCATCGACCCTGA...TGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp CAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGTCAGGGTCGATGCCCTaGTCTGCGACTGGGCCACCA +
Preference number: 4 (lower is better)
Translates to: QIIGQNLCHGPAQAPKDQSGSMP*SATGPP
Trigger: TGGTGGCCCAGTCGCAGAGCAGGGCATCGACCCTGA...CTGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR TCA 90 bp CCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGCGGCGTATAGGCACTaGAGGCAGCTGCCAGCTTGC +
Preference number: 4 (lower is better)
Translates to: PLANHWPEPVSRPCPSPKAAYRH*RQLPAC
Trigger: GCAAGCTGGCAGCTGCCTTCAGTGCCTATACGCCGC...TTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR TCA 90 bp TGGGGCTGTTTTCCATGTTGCTTTCCTTGCAGGACTTATGCCCAGAAGCAGCGGGGGGTCTCCGCCCTCTaGCCAGGCGGCTGTCTCAGA +
Preference number: 4 (lower is better)
Translates to: WGCFPCCFPCRTYAQKQRGVSAL*PGGCLR
Trigger: TCTGAGACAGCCGCCTGGTCAGAGGGCGGAGACCCC...CCGCTGCTTCTGGGCATAAGTCCTGCAAGGAAAGCAACATGGAAAACAGCCCCA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000650871.1
CDS-3UTR TCA 90 bp TGCGGTCATCTGTCGCTCCACATCAGTGAAGTGGTGCCAGAGCCCCTTCTGCTCGTCGCTCCACATCAGTaGAGTGGTGCCAGAGCCCCT +
Preference number: 4 (lower is better)
Translates to: CGHLSLHISEVVPEPLLLVAPHQ*SGARAP
Trigger: AGGGGCTCTGGCACCACTTCACTGATGTGGAGCGAC...GAGCAGAAGGGGCTCTGGCACCACTTCACTGATGTGGAGCGACAGATGACCGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505127.5
ENST00000509722.5
CDS-3UTR TCA 90 bp GGGAACATCCATGCTGTCGAGCAGTTGCCCCTCCTCATCCACTGTGGAGGCATCGTCGCTCCACATCAGTaGAGTGGTGCCAGAGCCCCT +
Preference number: 4 (lower is better)
Translates to: GNIHAVEQLPLLIHCGGIVAPHQ*SGARAP
Trigger: AGGGGCTCTGGCACCACTTCACTGATGTGGAGCGAC...GATGCCTCCACAGTGGATGAGGAGGGGCAACTGCTCGACAGCATGGATGTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509722.5
CDS-3UTR GCA 90 bp CAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGACTGTGCCGTATGACGCCAGTAACTGCTaGAACCCGGCGCCAATCACA +
Preference number: 4 (lower is better)
Translates to: QNLCHGPAQAPKDQTVPYDASNC*NPAPIT
Trigger: TGTGATTGGCGCCGGGTTGCAGCAGTTACTGGCGTC...ATACGGCACAGTCTGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000505127.5
ENST00000650871.1
CDS-3UTR GCA 90 bp CAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGAGGCAGCTGCCAGCTTaGAGGCTTCTGCAGCGGACA +
Preference number: 4 (lower is better)
Translates to: QIIGQNLCHGPAQAPKDQRQLPA*RLLQRT
Trigger: TGTCCGCTGCAGAAGCCTGCAAGCTGGCAGCTGCCT...CTGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp TTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACTCAGGGTCGATGCCCTaGTCTGCGACTGGGCCACCA +
Preference number: 4 (lower is better)
Translates to: LQIIGQNLCHGPAQAPKDSGSMP*SATGPP
Trigger: TGGTGGCCCAGTCGCAGAGCAGGGCATCGACCCTGA...GTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp CCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAAGGCATCAGGGTCGATaGCCTGCTCTGCGACTGGGC +
Preference number: 4 (lower is better)
Translates to: PLANHWPEPVSRPCPSPKRHQGR*PALRLG
Trigger: GCCCAGTCGCAGAGCAGGGCATCGACCCTGATGCCT...TTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp GCCCCTCCTCATCCACTGTGGAGGCATCAGGGTCGATGCCCTGCTCTGCGACTGGCGGCTGTCTCAGAATaGACAGTCTATGAGAGCCGT +
Preference number: 4 (lower is better)
Translates to: APPHPLWRHQGRCPALRLAAVSE*TVYESR
Trigger: ACGGCTCTCATAGACTGTGCATTCTGAGACAGCCGC...CAGTCGCAGAGCAGGGCATCGACCCTGATGCCTCCACAGTGGATGAGGAGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509722.5
CDS-3UTR CCA 90 bp GCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGCGGGGCAATTGGCGTaGCTGGCTGCAACTTGTGGA +
Preference number: 4 (lower is better)
Translates to: ANHWPEPVSRPCPSPKGPAGQLA*LAATCG
Trigger: TCCACAAGTTGCAGCCAGCCACGCCAATTGCCCCGC...TGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp TGCTGTGCGGTCATCTGTCGCTCCACATCAGTGAAGTGGTGCCAGAGCCCCTTCGCGGGGCAATTGGCGTaGCTGGCTGCAACTTGTGGA +
Preference number: 4 (lower is better)
Translates to: CCAVICRSTSVKWCQSPFAGQLA*LAATCG
Trigger: TCCACAAGTTGCAGCCAGCCACGCCAATTGCCCCGC...GAAGGGGCTCTGGCACCACTTCACTGATGTGGAGCGACAGATGACCGCACAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505127.5
ENST00000509722.5
CDS-3UTR CCA 90 bp GCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCACACCTGCGGGGCAATTaGCGTGGCTGGCTGCAACTT +
Preference number: 4 (lower is better)
Translates to: ANHWPEPVSRPCPSPKGPHLRGN*RGWLQL
Trigger: AAGTTGCAGCCAGCCACGCCAATTGCCCCGCAGGTG...TGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp CAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGACTGTGCCGTATACGGAGATTCGGGCTTaGCGAATAACCACCTGCGGG +
Preference number: 4 (lower is better)
Translates to: QNLCHGPAQAPKDQTVPYTEIRA*RITTCG
Trigger: CCCGCAGGTGGTTATTCGCCAAGCCCGAATCTCCGT...ATACGGCACAGTCTGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp GCCCCTCCTCATCCACTGTGGAGGCATCAGGGTCGATGCCCTGCTCTGCGACTGCCTCAGACAAGGCAGTaGAACACTGAGTGTCCACCA +
Preference number: 4 (lower is better)
Translates to: APPHPLWRHQGRCPALRLPQTRQ*NTECPP
Trigger: TGGTGGACACTCAGTGTTCCACTGCCTTGTCTGAGG...CAGTCGCAGAGCAGGGCATCGACCCTGATGCCTCCACAGTGGATGAGGAGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509722.5
CDS-3UTR CCA 90 bp CAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGACGCCTCTGCAGCGCTaGTCCTCGCTCTTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: QIIGQNLCHGPAQAPKDQTPLQR*SSLLSS
Trigger: AGAGGACAAGAGCGAGGACCAGCGCTGCAGAGGCGT...CTGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000509722.5
CDS-3UTR TCA 90 bp CCCAAGAACTCCCACTGGAATTCAGATAGGACCAAGGGCTGTCCCCCTCAGAAGGCGGCGTATAGGCACTaGAGGCAGCTGCCAGCTTGC +
Preference number: 4 (lower is better)
Translates to: PKNSHWNSDRTKGCPPQKAAYRH*RQLPAC
Trigger: GCAAGCTGGCAGCTGCCTTCAGTGCCTATACGCCGC...CTTCTGAGGGGGACAGCCCTTGGTCCTATCTGAATTCCAGTGGGAGTTCTTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509722.5
CDS-3UTR TCA 90 bp GCCCCTCCTCATCCACTGTGGAGGCATCAGGGTCGATGCCCTGCTCTGCGACTGCATCATCTCTCTTGGTaGGGAGGCCAATCTCAAAGG +
Preference number: 4 (lower is better)
Translates to: APPHPLWRHQGRCPALRLHHLSW*GGQSQR
Trigger: CCTTTGAGATTGGCCTCCTCACCAAGAGAGATGATG...CAGTCGCAGAGCAGGGCATCGACCCTGATGCCTCCACAGTGGATGAGGAGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509722.5
CDS-3UTR TCA 90 bp CAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGACTGTGCCGTATTGTGCTCGGTGGAGTTaGCTGGGCTTAAAAACCCCC +
Preference number: 4 (lower is better)
Translates to: QNLCHGPAQAPKDQTVPYCARWS*LGLKTP
Trigger: GGGGGTTTTTAAGCCCAGTCAACTCCACCGAGCACA...ATACGGCACAGTCTGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR TCA 90 bp TCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAGTCGCTCCACATCAGTaGAGTGGTGCCAGAGCCCCT +
Preference number: 4 (lower is better)
Translates to: SSCKSLARTCVTALPKPQVAPHQ*SGARAP
Trigger: AGGGGCTCTGGCACCACTTCACTGATGTGGAGCGAC...TTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp GCCCCTCCTCATCCACTGTGGAGGCATCAGGGTCGATGCCCTGCTCTGCGACTGAGACCTTTGGCGACCTaGAGAAGTTTTCCAGAGACG +
Preference number: 4 (lower is better)
Translates to: APPHPLWRHQGRCPALRLRPLAT*RSFPET
Trigger: CGTCTCTGGAAAACTTCTGCAGGTCGCCAAAGGTCT...CAGTCGCAGAGCAGGGCATCGACCCTGATGCCTCCACAGTGGATGAGGAGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509722.5
CDS-3UTR GCA 90 bp CAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGACTGTGCCGTATCAGCTTGCAGGCTTCTaGAGCGGACAGCAAATGGTG +
Preference number: 4 (lower is better)
Translates to: QNLCHGPAQAPKDQTVPYQLAGF*SGQQMV
Trigger: CACCATTTGCTGTCCGCTGCAGAAGCCTGCAAGCTG...ATACGGCACAGTCTGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp TTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACGGCACTGAAGGCAGCTaGCAGCTTGCAGGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: LQIIGQNLCHGPAQAPKDGTEGS*QLAGFC
Trigger: GCAGAAGCCTGCAAGCTGGCAGCTGCCTTCAGTGCC...GTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp CAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGACTGTGCCGTATCCCTGCTCTTTCCCCTaGCTGTCTTTGACATCGCAG +
Preference number: 4 (lower is better)
Translates to: QNLCHGPAQAPKDQTVPYPCSFP*LSLTSQ
Trigger: CTGCGATGTCAAAGACAGGCAGGGGAAAGAGCAGGG...ATACGGCACAGTCTGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp CAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGCTGGCCCCTCTCCTTTaGTGCAATCTCTTGGCCCAC +
Preference number: 4 (lower is better)
Translates to: QIIGQNLCHGPAQAPKDQLAPLL*CNLLAH
Trigger: GTGGGCCAAGAGATTGCAGCAAAGGAGAGGGGCCAG...CTGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458497.6
CDS-3UTR CCA 90 bp CAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGGGCAATTGGCGTGGCTaGCTGCAACTTGTGGAGACC +
Preference number: 4 (lower is better)
Translates to: QIIGQNLCHGPAQAPKDQGNWRG*LQLVET
Trigger: GGTCTCCACAAGTTGCAGCCAGCCACGCCAATTGCC...CTGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp GCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGGCAATTGGCGTGGCTaGCTGCAACTTGTGGAGACC +
Preference number: 4 (lower is better)
Translates to: ANHWPEPVSRPCPSPKGPGNWRG*LQLVET
Trigger: GGTCTCCACAAGTTGCAGCCAGCCACGCCAATTGCC...TGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp CCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGCGGGGCAATTGGCGTaGCTGGCTGCAACTTGTGGA +
Preference number: 4 (lower is better)
Translates to: PLANHWPEPVSRPCPSPKAGQLA*LAATCG
Trigger: TCCACAAGTTGCAGCCAGCCACGCCAATTGCCCCGC...TTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp GCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAACGGAGATTCGGGCTTaGCGAATAACCACCTGCGGG +
Preference number: 4 (lower is better)
Translates to: ANHWPEPVSRPCPSPKGPTEIRA*RITTCG
Trigger: CCCGCAGGTGGTTATTCGCCAAGCCCGAATCTCCGT...TGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp TGCTGTGCGGTCATCTGTCGCTCCACATCAGTGAAGTGGTGCCAGAGCCCCTTCACGGAGATTCGGGCTTaGCGAATAACCACCTGCGGG +
Preference number: 4 (lower is better)
Translates to: CCAVICRSTSVKWCQSPFTEIRA*RITTCG
Trigger: CCCGCAGGTGGTTATTCGCCAAGCCCGAATCTCCGT...GAAGGGGCTCTGGCACCACTTCACTGATGTGGAGCGACAGATGACCGCACAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505127.5
ENST00000509722.5
CDS-3UTR CCA 90 bp GCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCACCTCCTCATCCACTGTaGAGGCATCAGGGTCGATGC +
Preference number: 4 (lower is better)
Translates to: ANHWPEPVSRPCPSPKGPPPHPL*RHQGRC
Trigger: GCATCGACCCTGATGCCTCCACAGTGGATGAGGAGG...TGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp GCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCACGCTTACAGAGGAATTaGGGGTCTCCGCCCTCTGAC +
Preference number: 4 (lower is better)
Translates to: ANHWPEPVSRPCPSPKGPRLQRN*GSPPSD
Trigger: GTCAGAGGGCGGAGACCCCCAATTCCTCTGTAAGCG...TGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp CAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGCGCTTACAGAGGAATTaGGGGTCTCCGCCCTCTGAC +
Preference number: 4 (lower is better)
Translates to: QIIGQNLCHGPAQAPKDQRLQRN*GSPPSD
Trigger: GTCAGAGGGCGGAGACCCCCAATTCCTCTGTAAGCG...CTGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp CAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGACTGTGCCGTATTCCACATCAGTGAAGTaGTGCCAGAGCCCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: QNLCHGPAQAPKDQTVPYSTSVK*CQSPFC
Trigger: GCAGAAGGGGCTCTGGCACCACTTCACTGATGTGGA...ATACGGCACAGTCTGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR TCA 90 bp CAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGACTGTGCCGTATAGAGCTTCTCTGTCCTaGCTTCTGGAGGAAGTGCTG +
Preference number: 4 (lower is better)
Translates to: QNLCHGPAQAPKDQTVPYRASLS*LLEEVL
Trigger: CAGCACTTCCTCCAGAAGTCAGGACAGAGAAGCTCT...ATACGGCACAGTCTGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR TCA 90 bp AGACAAGGCAGTGGAACACTGAGTGTCCACCAGATGTTCTTTGCCAGGCTCTTTGGGGTCTCCGCCCTCTaGCCAGGCGGCTGTCTCAGA +
Preference number: 4 (lower is better)
Translates to: RQGSGTLSVHQMFFARLFGVSAL*PGGCLR
Trigger: TCTGAGACAGCCGCCTGGTCAGAGGGCGGAGACCCC...AAAGAGCCTGGCAAAGAACATCTGGTGGACACTCAGTGTTCCACTGCCTTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509722.5
CDS-3UTR GCA 90 bp CCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAATGGGGAGTAAAGCTCTaGAGCGCTGGTCCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: PLANHWPEPVSRPCPSPKWGVKL*SAGPRS
Trigger: AGAGCGAGGACCAGCGCTGCAGAGCTTTACTCCCCA...TTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000505127.5
ENST00000650871.1
CDS-3UTR GCA 90 bp TCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAATGGGGAGTAAAGCTCTaGAGCGCTGGTCCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: SSCKSLARTCVTALPKPQWGVKL*SAGPRS
Trigger: AGAGCGAGGACCAGCGCTGCAGAGCTTTACTCCCCA...TTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000505127.5
ENST00000650871.1
CDS-3UTR GCA 90 bp TTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACGACGCCAGTAACTGCTaGAACCCGGCGCCAATCACA +
Preference number: 4 (lower is better)
Translates to: LQIIGQNLCHGPAQAPKDDASNC*NPAPIT
Trigger: TGTGATTGGCGCCGGGTTGCAGCAGTTACTGGCGTC...GTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000505127.5
ENST00000650871.1
CDS-3UTR GCA 90 bp AATTCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCAGGGACGCCAGTAACTaGTGCAACCCGGCGCCAATC +
Preference number: 4 (lower is better)
Translates to: NSSCKSLARTCVTALPKPRDASN*CNPAPI
Trigger: GATTGGCGCCGGGTTGCAGCAGTTACTGGCGTCCCT...GGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGAATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000505127.5
ENST00000650871.1
CDS-3UTR GCA 90 bp TTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACTGGCGAATAACCACCTaGGGGGCAATTGGCGTGGCT +
Preference number: 4 (lower is better)
Translates to: LQIIGQNLCHGPAQAPKDWRITT*GAIGVA
Trigger: AGCCACGCCAATTGCCCCGCAGGTGGTTATTCGCCA...GTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp TCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAATGGCGAATAACCACCTaGGGGGCAATTGGCGTGGCT +
Preference number: 4 (lower is better)
Translates to: SSCKSLARTCVTALPKPQWRITT*GAIGVA
Trigger: AGCCACGCCAATTGCCCCGCAGGTGGTTATTCGCCA...TTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp CCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAATGGCGAATAACCACCTaGGGGGCAATTGGCGTGGCT +
Preference number: 4 (lower is better)
Translates to: PLANHWPEPVSRPCPSPKWRITT*GAIGVA
Trigger: AGCCACGCCAATTGCCCCGCAGGTGGTTATTCGCCA...TTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp TGCGGTCATCTGTCGCTCCACATCAGTGAAGTGGTGCCAGAGCCCCTTCTGCTCCAGCTTGCAGGCTTCTaGAGCGGACAGCAAATGGTG +
Preference number: 4 (lower is better)
Translates to: CGHLSLHISEVVPEPLLLQLAGF*SGQQMV
Trigger: CACCATTTGCTGTCCGCTGCAGAAGCCTGCAAGCTG...GAGCAGAAGGGGCTCTGGCACCACTTCACTGATGTGGAGCGACAGATGACCGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505127.5
ENST00000509722.5
CDS-3UTR GCA 90 bp CAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGCAGCTTGCAGGCTTCTaGAGCGGACAGCAAATGGTG +
Preference number: 4 (lower is better)
Translates to: QIIGQNLCHGPAQAPKDQQLAGF*SGQQMV
Trigger: CACCATTTGCTGTCCGCTGCAGAAGCCTGCAAGCTG...CTGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp CAGCTTGCAGGCTTCTGCAGCGGACAGCAAATGGTGGTCAAACTCCTTCAGCAGGGCACTGAAGGCAGCTaGCAGCTTGCAGGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: QLAGFCSGQQMVVKLLQQGTEGS*QLAGFC
Trigger: GCAGAAGCCTGCAAGCTGGCAGCTGCCTTCAGTGCC...CTGCTGAAGGAGTTTGACCACCATTTGCTGTCCGCTGCAGAAGCCTGCAAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509722.5
CDS-3UTR GCA 90 bp CAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGACAGAGCTGACTTGCTaGATGGACCGTCCCTGTCTC +
Preference number: 4 (lower is better)
Translates to: QIIGQNLCHGPAQAPKDQTELTC*MDRPCL
Trigger: GAGACAGGGACGGTCCATGCAGCAAGTCAGCTCTGT...CTGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp CAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGCCCTGCTCTTTCCCCTaGCTGTCTTTGACATCGCAG +
Preference number: 4 (lower is better)
Translates to: QIIGQNLCHGPAQAPKDQPCSFP*LSLTSQ
Trigger: CTGCGATGTCAAAGACAGGCAGGGGAAAGAGCAGGG...CTGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp TCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAGTCGATGCCCTGCTCTaGGACTGGGCCACCACTTTT +
Preference number: 4 (lower is better)
Translates to: SSCKSLARTCVTALPKPQVDALL*DWATTF
Trigger: AAAAGTGGTGGCCCAGTCGCAGAGCAGGGCATCGAC...TTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp CCCTGCTGGCACTCATTCTCTCTCCTGCTACCCTATGAAGAGGTGCCTTCTGCCGTCGATGCCCTGCTCTaGGACTGGGCCACCACTTTT +
Preference number: 4 (lower is better)
Translates to: PCWHSFSLLLPYEEVPSAVDALL*DWATTF
Trigger: AAAAGTGGTGGCCCAGTCGCAGAGCAGGGCATCGAC...GGCAGAAGGCACCTCTTCATAGGGTAGCAGGAGAGAGAATGAGTGCCAGCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR GCA 90 bp CAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGATGCTGTCGAGCAGTTaGCCCTCCTCATCCACTGTG +
Preference number: 4 (lower is better)
Translates to: QIIGQNLCHGPAQAPKDQMLSSS*PSSSTV
Trigger: CACAGTGGATGAGGAGGGGCAACTGCTCGACAGCAT...CTGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp CTCCGCCCTCTGACCAGGCGGCTGTCTCAGAATGCACAGTCTATGAGAGCCGTGCTCTTCCGACACATCTaGCGCTTCCAACAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: LRPLTRRLSQNAQSMRAVLFRHI*RFQQEL
Trigger: CAGCTCTTGTTGGAAGCGCCAGATGTGTCGGAAGAG...CACGGCTCTCATAGACTGTGCATTCTGAGACAGCCGCCTGGTCAGAGGGCGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509722.5
CDS-3UTR CCA 90 bp CAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGAAAGCTCTGCAGCGCTaGTCCTCGCTCTTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: QIIGQNLCHGPAQAPKDQKALQR*SSLLSS
Trigger: AGAGGACAAGAGCGAGGACCAGCGCTGCAGAGCTTT...CTGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000505127.5
ENST00000650871.1
CDS-3UTR CCA 90 bp GCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGGGTCCTTAACTCGCTaGGGAGTAAAGCTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: ANHWPEPVSRPCPSPKGPGSLTR*GVKLCS
Trigger: GCTGCAGAGCTTTACTCCCCAGCGAGTTAAGGACCC...TGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000505127.5
ENST00000650871.1
CDS-3UTR CCA 90 bp CAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGGGGTCCTTAACTCGCTaGGGAGTAAAGCTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: QIIGQNLCHGPAQAPKDQGSLTR*GVKLCS
Trigger: GCTGCAGAGCTTTACTCCCCAGCGAGTTAAGGACCC...CTGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000505127.5
ENST00000650871.1
CDS-3UTR CCA 90 bp TTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACGCTGGCTGCAACTTGTaGAGACCTTTGGCGACCTGC +
Preference number: 4 (lower is better)
Translates to: LQIIGQNLCHGPAQAPKDAGCNL*RPLATC
Trigger: GCAGGTCGCCAAAGGTCTCCACAAGTTGCAGCCAGC...GTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp TCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAGGCAATTGGCGTGGCTaGCTGCAACTTGTGGAGACC +
Preference number: 4 (lower is better)
Translates to: SSCKSLARTCVTALPKPQGNWRG*LQLVET
Trigger: GGTCTCCACAAGTTGCAGCCAGCCACGCCAATTGCC...TTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp TCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAACGGAGATTCGGGCTTaGCGAATAACCACCTGCGGG +
Preference number: 4 (lower is better)
Translates to: SSCKSLARTCVTALPKPQTEIRA*RITTCG
Trigger: CCCGCAGGTGGTTATTCGCCAAGCCCGAATCTCCGT...TTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp CAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGACTGTGCCGTATGCGGACAGCAAATGGTaGTCAAACTCCTTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: QNLCHGPAQAPKDQTVPYADSKW*SNSFSR
Trigger: CCTGCTGAAGGAGTTTGACCACCATTTGCTGTCCGC...ATACGGCACAGTCTGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp TCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAGTCCCTGTCTCCCCATaGAGCCTTCTGTGCACTGTG +
Preference number: 4 (lower is better)
Translates to: SSCKSLARTCVTALPKPQVPVSP*SLLCTV
Trigger: CACAGTGCACAGAAGGCTCCATGGGGAGACAGGGAC...TTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp CAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGACTGTGCCGTATCAAGCACTGGAAGTCTaGCTGCCACTCAGAGACTTG +
Preference number: 4 (lower is better)
Translates to: QNLCHGPAQAPKDQTVPYQALEV*LPLRDL
Trigger: CAAGTCTCTGAGTGGCAGCCAGACTTCCAGTGCTTG...ATACGGCACAGTCTGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp CAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGACTGTGCCGTATCCTCAGACAAGGCAGTaGAACACTGAGTGTCCACCA +
Preference number: 4 (lower is better)
Translates to: QNLCHGPAQAPKDQTVPYPQTRQ*NTECPP
Trigger: TGGTGGACACTCAGTGTTCCACTGCCTTGTCTGAGG...ATACGGCACAGTCTGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp TCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAGCCCTGCTCTGCGACTaGGCCACCACTTTTTCTGGA +
Preference number: 4 (lower is better)
Translates to: SSCKSLARTCVTALPKPQALLCD*ATTFSG
Trigger: TCCAGAAAAAGTGGTGGCCCAGTCGCAGAGCAGGGC...TTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp TCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAACCTCCTCATCCACTGTaGAGGCATCAGGGTCGATGC +
Preference number: 4 (lower is better)
Translates to: SSCKSLARTCVTALPKPQPPHPL*RHQGRC
Trigger: GCATCGACCCTGATGCCTCCACAGTGGATGAGGAGG...TTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp CCCTGCTGGCACTCATTCTCTCTCCTGCTACCCTATGAAGAGGTGCCTTCTGCCCCTCCTCATCCACTGTaGAGGCATCAGGGTCGATGC +
Preference number: 4 (lower is better)
Translates to: PCWHSFSLLLPYEEVPSAPPHPL*RHQGRC
Trigger: GCATCGACCCTGATGCCTCCACAGTGGATGAGGAGG...GGCAGAAGGCACCTCTTCATAGGGTAGCAGGAGAGAGAATGAGTGCCAGCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CCA 90 bp TTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCGCTTACAGAGGAATTaGGGGTCTCCGCCCTCTGAC +
Preference number: 4 (lower is better)
Translates to: LQIIGQNLCHGPAQAPKDRLQRN*GSPPSD
Trigger: GTCAGAGGGCGGAGACCCCCAATTCCTCTGTAAGCG...GTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp CAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGTCCACATCAGTGAAGTaGTGCCAGAGCCCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: QIIGQNLCHGPAQAPKDQSTSVK*CQSPFC
Trigger: GCAGAAGGGGCTCTGGCACCACTTCACTGATGTGGA...CTGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
3UTR CAA 72 bp CCCATTTGTGCAGGGAACATCCATGCTGTCGAGCAGTaGCCCCTCCTCATCCACTGTGGAGGCATCAGGGTC +
Preference number: 4 (lower is better)
Translates to: PICAGNIHAVEQ*PLLIHCGGIRV
Trigger: GACCCTGATGCCTCCACAGTGGATGAGGAGGGGCAACTGCTCGACAGCATGGATGTTCCCTGCACAAATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509722.5
CDS-3UTR TCA 90 bp GCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGCTTCCAACAAGAGCTaGTCCAGCACTTGCTTGCAC +
Preference number: 4 (lower is better)
Translates to: ANHWPEPVSRPCPSPKGPASNKS*SSTCLH
Trigger: GTGCAAGCAAGTGCTGGATCAGCTCTTGTTGGAAGC...TGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR TCA 90 bp CCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGCTTCCTTACAGAGCTaGCTTGCTGCATGGACCGTC +
Preference number: 4 (lower is better)
Translates to: PLANHWPEPVSRPCPSPKASLQS*LAAWTV
Trigger: GACGGTCCATGCAGCAAGTCAGCTCTGTAAGGAAGC...TTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR TCA 90 bp TTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACTGTGCTCGGTGGAGTTaGCTGGGCTTAAAAACCCCC +
Preference number: 4 (lower is better)
Translates to: LQIIGQNLCHGPAQAPKDCARWS*LGLKTP
Trigger: GGGGGTTTTTAAGCCCAGTCAACTCCACCGAGCACA...GTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR TCA 90 bp AAGCAGCGGTCTCCTGACCCATTCTTGATAACTGTGGCAGAGGGAAAGAGGCTCGTCGCTCCACATCAGTaGAGTGGTGCCAGAGCCCCT +
Preference number: 4 (lower is better)
Translates to: KQRSPDPFLITVAEGKRLVAPHQ*SGARAP
Trigger: AGGGGCTCTGGCACCACTTCACTGATGTGGAGCGAC...GAGCCTCTTTCCCTCTGCCACAGTTATCAAGAATGGGTCAGGAGACCGCTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000650871.1
CDS-3UTR TCA 90 bp AATTCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCAGAGCACCACAGCTGTaGGCACGAAGAGCGGCGTAT +
Preference number: 4 (lower is better)
Translates to: NSSCKSLARTCVTALPKPRAPQL*ARRAAY
Trigger: ATACGCCGCTCTTCGTGCTCACAGCTGTGGTGCTCT...GGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGAATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505127.5
CDS-3UTR GCA 90 bp TTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGCTTGCAGGCTTCTaGAGCGGACAGCAAATGGTG +
Preference number: 4 (lower is better)
Translates to: LQIIGQNLCHGPAQAPKDQLAGF*SGQQMV
Trigger: CACCATTTGCTGTCCGCTGCAGAAGCCTGCAAGCTG...GTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp TGGGGCTGTTTTCCATGTTGCTTTCCTTGCAGGACTTATGCCCAGAAGCAGCGGAGGCAGCTGCCAGCTTaGAGGCTTCTGCAGCGGACA +
Preference number: 4 (lower is better)
Translates to: WGCFPCCFPCRTYAQKQRRQLPA*RLLQRT
Trigger: TGTCCGCTGCAGAAGCCTGCAAGCTGGCAGCTGCCT...CCGCTGCTTCTGGGCATAAGTCCTGCAAGGAAAGCAACATGGAAAACAGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000650871.1
CDS-3UTR GCA 90 bp GAAGTGGTGCCAGAGCCCCTTCTGCTCCTTATAGTCTTTCCCAACATACCTCCCAGGCAGCTGCCAGCTTaGAGGCTTCTGCAGCGGACA +
Preference number: 4 (lower is better)
Translates to: EVVPEPLLLLIVFPNIPPRQLPA*RLLQRT
Trigger: TGTCCGCTGCAGAAGCCTGCAAGCTGGCAGCTGCCT...GGGAGGTATGTTGGGAAAGACTATAAGGAGCAGAAGGGGCTCTGGCACCACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505127.5
ENST00000509722.5
CDS-3UTR GCA 90 bp GGGAACATCCATGCTGTCGAGCAGTTGCCCCTCCTCATCCACTGTGGAGGCATCCCATGGAGCCTTCTGTaGACTGTGGTGAGACCGAAA +
Preference number: 4 (lower is better)
Translates to: GNIHAVEQLPLLIHCGGIPWSLL*TVVRPK
Trigger: TTTCGGTCTCACCACAGTGCACAGAAGGCTCCATGG...GATGCCTCCACAGTGGATGAGGAGGGGCAACTGCTCGACAGCATGGATGTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509722.5
CDS-3UTR GCA 90 bp CCTCTGACCAGGCGGCTGTCTCAGAATGCACAGTCTATGAGAGCCGTGCCCATTTGCAGGGAACATCCATaGTGTCGAGCAGTTGCCCCT +
Preference number: 4 (lower is better)
Translates to: PLTRRLSQNAQSMRAVPICREHP*CRAVAP
Trigger: AGGGGCAACTGCTCGACAGCATGGATGTTCCCTGCA...AATGGGCACGGCTCTCATAGACTGTGCATTCTGAGACAGCCGCCTGGTCAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509722.5
CDS-3UTR GCA 90 bp CAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGTGTCACATAGTGCTGTaGGGTCATCTGTCGCTCCAC +
Preference number: 4 (lower is better)
Translates to: QIIGQNLCHGPAQAPKDQCHIVL*GHLSLH
Trigger: GTGGAGCGACAGATGACCGCACAGCACTATGTGACA...CTGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp TGGCTTTATAAGCATCTGGCATTTCCCCTGCTGGCACTCATTCTCTCTCCTGCTCCTCAGGGACGCCTCTaGAGCGCTGGTCCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: WLYKHLAFPLLALILSPAPQGRL*SAGPRS
Trigger: AGAGCGAGGACCAGCGCTGCAGAGGCGTCCCTGAGG...AGCAGGAGAGAGAATGAGTGCCAGCAGGGGAAATGCCAGATGCTTATAAAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504176.6
CDS-3UTR GCA 90 bp AGACAAGGCAGTGGAACACTGAGTGTCCACCAGATGTTCTTTGCCAGGCTCTTTCCTCAGGGACGCCTCTaGAGCGCTGGTCCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: RQGSGTLSVHQMFFARLFPQGRL*SAGPRS
Trigger: AGAGCGAGGACCAGCGCTGCAGAGGCGTCCCTGAGG...AAAGAGCCTGGCAAAGAACATCTGGTGGACACTCAGTGTTCCACTGCCTTGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509722.5
CDS-3UTR CCA 90 bp CCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGGTCCTTAACTCGCTaGGGAGTAAAGCTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: PLANHWPEPVSRPCPSPKGSLTR*GVKLCS
Trigger: GCTGCAGAGCTTTACTCCCCAGCGAGTTAAGGACCC...TTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000505127.5
ENST00000650871.1
CDS-3UTR CCA 90 bp AATTCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCGCTGGCTGCAACTTGTaGAGACCTTTGGCGACCTGC +
Preference number: 4 (lower is better)
Translates to: NSSCKSLARTCVTALPKPAGCNL*RPLATC
Trigger: GCAGGTCGCCAAAGGTCTCCACAAGTTGCAGCCAGC...GGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGAATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp AATTCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCGGCAATTGGCGTGGCTaGCTGCAACTTGTGGAGACC +
Preference number: 4 (lower is better)
Translates to: NSSCKSLARTCVTALPKPGNWRG*LQLVET
Trigger: GGTCTCCACAAGTTGCAGCCAGCCACGCCAATTGCC...GGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGAATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp TGGGGCTGTTTTCCATGTTGCTTTCCTTGCAGGACTTATGCCCAGAAGCAGCGGCACCTGCGGGGCAATTaGCGTGGCTGGCTGCAACTT +
Preference number: 4 (lower is better)
Translates to: WGCFPCCFPCRTYAQKQRHLRGN*RGWLQL
Trigger: AAGTTGCAGCCAGCCACGCCAATTGCCCCGCAGGTG...CCGCTGCTTCTGGGCATAAGTCCTGCAAGGAAAGCAACATGGAAAACAGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000650871.1
CDS-3UTR CCA 90 bp GCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGCAGCGGACAGCAAATaGTGGTCAAACTCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: ANHWPEPVSRPCPSPKGPAADSK*WSNSFS
Trigger: GCTGAAGGAGTTTGACCACCATTTGCTGTCCGCTGC...TGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp CAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGGCAGCGGACAGCAAATaGTGGTCAAACTCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: QIIGQNLCHGPAQAPKDQAADSK*WSNSFS
Trigger: GCTGAAGGAGTTTGACCACCATTTGCTGTCCGCTGC...CTGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp GCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCATGCCAGGCTCTTTTCTaGCTGACCTGTCGTCAACGT +
Preference number: 4 (lower is better)
Translates to: ANHWPEPVSRPCPSPKGPCQALF*LTCRQR
Trigger: ACGTTGACGACAGGTCAGCCAGAAAAGAGCCTGGCA...TGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp CCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGCAGGAGACCAGGACTaGGGAGCCAAAGTTTCGGTT +
Preference number: 4 (lower is better)
Translates to: PLANHWPEPVSRPCPSPKAGDQD*GAKVSV
Trigger: AACCGAAACTTTGGCTCCCCAGTCCTGGTCTCCTGC...TTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458497.6
CDS-3UTR TCA 90 bp CAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGGACCGAAAGCAGCTTTaGCAAAGCTGTGAAGCTCCT +
Preference number: 4 (lower is better)
Translates to: QIIGQNLCHGPAQAPKDQDRKQL*QSCEAP
Trigger: AGGAGCTTCACAGCTTTGTCAAAGCTGCTTTCGGTC...CTGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR TCA 90 bp CCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAAGAGCTTCTCTGTCCTaGCTTCTGGAGGAAGTGCTG +
Preference number: 4 (lower is better)
Translates to: PLANHWPEPVSRPCPSPKRASLS*LLEEVL
Trigger: CAGCACTTCCTCCAGAAGTCAGGACAGAGAAGCTCT...TTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR TCA 90 bp CCTCTGACCAGGCGGCTGTCTCAGAATGCACAGTCTATGAGAGCCGTGCCCATTAGAGCTTCTCTGTCCTaGCTTCTGGAGGAAGTGCTG +
Preference number: 4 (lower is better)
Translates to: PLTRRLSQNAQSMRAVPIRASLS*LLEEVL
Trigger: CAGCACTTCCTCCAGAAGTCAGGACAGAGAAGCTCT...AATGGGCACGGCTCTCATAGACTGTGCATTCTGAGACAGCCGCCTGGTCAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509722.5
CDS-3UTR TCA 90 bp CAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGAGGCTCTTTTCTGGCTaGCCTGTCGTCAACGTGATA +
Preference number: 4 (lower is better)
Translates to: QIIGQNLCHGPAQAPKDQRLFSG*PVVNVI
Trigger: TATCACGTTGACGACAGGTCAGCCAGAAAAGAGCCT...CTGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR TCA 90 bp GCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAAAGGCAGTGGAACACTaGGTGTCCACCAGATGTTCT +
Preference number: 4 (lower is better)
Translates to: ANHWPEPVSRPCPSPKGPKAVEH*VSTRCS
Trigger: AGAACATCTGGTGGACACTCAGTGTTCCACTGCCTT...TGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR TCA 90 bp TCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAATGCCTGGGGTATTATaGGGCGAGAAGGGTGTCAAG +
Preference number: 4 (lower is better)
Translates to: SSCKSLARTCVTALPKPQMPGVL*GEKGVK
Trigger: CTTGACACCCTTCTCGCCTCATAATACCCCAGGCAT...TTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR TCA 90 bp CCCTGCTGGCACTCATTCTCTCTCCTGCTACCCTATGAAGAGGTGCCTTCTGCCATGCCTGGGGTATTATaGGGCGAGAAGGGTGTCAAG +
Preference number: 4 (lower is better)
Translates to: PCWHSFSLLLPYEEVPSAMPGVL*GEKGVK
Trigger: CTTGACACCCTTCTCGCCTCATAATACCCCAGGCAT...GGCAGAAGGCACCTCTTCATAGGGTAGCAGGAGAGAGAATGAGTGCCAGCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR TCA 90 bp CAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGAGAAGCAGAACGATATaGGGGTCTGGAGTGAGCAGA +
Preference number: 4 (lower is better)
Translates to: QIIGQNLCHGPAQAPKDQRSRTI*GSGVSR
Trigger: TCTGCTCACTCCAGACCCTCATATCGTTCTGCTTCT...CTGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR TCA 90 bp CAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGCATCTTTCCCGGCAATaGAACCCAAGAACTCCCACT +
Preference number: 4 (lower is better)
Translates to: QIIGQNLCHGPAQAPKDQHLSRQ*NPRTPT
Trigger: AGTGGGAGTTCTTGGGTTTCATTGCCGGGAAAGATG...CTGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR TCA 90 bp GCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCACATCTTTCCCGGCAATaGAACCCAAGAACTCCCACT +
Preference number: 4 (lower is better)
Translates to: ANHWPEPVSRPCPSPKGPHLSRQ*NPRTPT
Trigger: AGTGGGAGTTCTTGGGTTTCATTGCCGGGAAAGATG...TGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR TCA 90 bp GCTTACAGAGGAATTGGGGGTCTCCGCCCTCTGACCAGGCGGCTGTCTCAGAATCATCTTTCCCGGCAATaGAACCCAAGAACTCCCACT +
Preference number: 4 (lower is better)
Translates to: AYRGIGGLRPLTRRLSQNHLSRQ*NPRTPT
Trigger: AGTGGGAGTTCTTGGGTTTCATTGCCGGGAAAGATG...ATTCTGAGACAGCCGCCTGGTCAGAGGGCGGAGACCCCCAATTCCTCTGTAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509722.5
CDS-3UTR GCA 90 bp CAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGACTGTGCCGTATACTTGCTTGCACTCTTaGAGTAGCACAGCTACCACT +
Preference number: 4 (lower is better)
Translates to: QNLCHGPAQAPKDQTVPYTCLHS*SSTATT
Trigger: AGTGGTAGCTGTGCTACTGCAAGAGTGCAAGCAAGT...ATACGGCACAGTCTGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp TGGGGCTGTTTTCCATGTTGCTTTCCTTGCAGGACTTATGCCCAGAAGCAGCGGTGGGGAGTAAAGCTCTaGAGCGCTGGTCCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: WGCFPCCFPCRTYAQKQRWGVKL*SAGPRS
Trigger: AGAGCGAGGACCAGCGCTGCAGAGCTTTACTCCCCA...CCGCTGCTTCTGGGCATAAGTCCTGCAAGGAAAGCAACATGGAAAACAGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000505127.5
ENST00000650871.1
CDS-3UTR GCA 90 bp TGGGGCTGTTTTCCATGTTGCTTTCCTTGCAGGACTTATGCCCAGAAGCAGCGGGACGCCAGTAACTGCTaGAACCCGGCGCCAATCACA +
Preference number: 4 (lower is better)
Translates to: WGCFPCCFPCRTYAQKQRDASNC*NPAPIT
Trigger: TGTGATTGGCGCCGGGTTGCAGCAGTTACTGGCGTC...CCGCTGCTTCTGGGCATAAGTCCTGCAAGGAAAGCAACATGGAAAACAGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000505127.5
ENST00000650871.1
CDS-3UTR GCA 90 bp CAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGAGACCTTTGGCGACCTaGAGAAGTTTTCCAGAGACG +
Preference number: 4 (lower is better)
Translates to: QIIGQNLCHGPAQAPKDQRPLAT*RSFPET
Trigger: CGTCTCTGGAAAACTTCTGCAGGTCGCCAAAGGTCT...CTGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp GCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAAGACCTTTGGCGACCTaGAGAAGTTTTCCAGAGACG +
Preference number: 4 (lower is better)
Translates to: ANHWPEPVSRPCPSPKGPRPLAT*RSFPET
Trigger: CGTCTCTGGAAAACTTCTGCAGGTCGCCAAAGGTCT...TGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp TTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACATTGGCGTGGCTGGCTaGAACTTGTGGAGACCTTTG +
Preference number: 4 (lower is better)
Translates to: LQIIGQNLCHGPAQAPKDIGVAG*NLWRPL
Trigger: CAAAGGTCTCCACAAGTTGCAGCCAGCCACGCCAAT...GTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp AAGCAGCGGTCTCCTGACCCATTCTTGATAACTGTGGCAGAGGGAAAGAGGCTCTGGCGAATAACCACCTaGGGGGCAATTGGCGTGGCT +
Preference number: 4 (lower is better)
Translates to: KQRSPDPFLITVAEGKRLWRITT*GAIGVA
Trigger: AGCCACGCCAATTGCCCCGCAGGTGGTTATTCGCCA...GAGCCTCTTTCCCTCTGCCACAGTTATCAAGAATGGGTCAGGAGACCGCTGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000650871.1
CDS-3UTR GCA 90 bp TGGGGCTGTTTTCCATGTTGCTTTCCTTGCAGGACTTATGCCCAGAAGCAGCGGTGGCGAATAACCACCTaGGGGGCAATTGGCGTGGCT +
Preference number: 4 (lower is better)
Translates to: WGCFPCCFPCRTYAQKQRWRITT*GAIGVA
Trigger: AGCCACGCCAATTGCCCCGCAGGTGGTTATTCGCCA...CCGCTGCTTCTGGGCATAAGTCCTGCAAGGAAAGCAACATGGAAAACAGCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000650871.1
CDS-3UTR GCA 90 bp AATTCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCACAGAGCTGACTTGCTaGATGGACCGTCCCTGTCTC +
Preference number: 4 (lower is better)
Translates to: NSSCKSLARTCVTALPKPTELTC*MDRPCL
Trigger: GAGACAGGGACGGTCCATGCAGCAAGTCAGCTCTGT...GGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGAATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp GCAGAGGGAAAGAGGCTCTGCAGGATCTTGTGCTGCCAATTAAATGCAGGACTTAGGCATCAGGGTCGATaGCCTGCTCTGCGACTGGGC +
Preference number: 4 (lower is better)
Translates to: AEGKRLCRILCCQLNAGLRHQGR*PALRLG
Trigger: GCCCAGTCGCAGAGCAGGGCATCGACCCTGATGCCT...AAGTCCTGCATTTAATTGGCAGCACAAGATCCTGCAGAGCCTCTTTCCCTCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp AGACAAGGCAGTGGAACACTGAGTGTCCACCAGATGTTCTTTGCCAGGCTCTTTAGGCATCAGGGTCGATaGCCTGCTCTGCGACTGGGC +
Preference number: 4 (lower is better)
Translates to: RQGSGTLSVHQMFFARLFRHQGR*PALRLG
Trigger: GCCCAGTCGCAGAGCAGGGCATCGACCCTGATGCCT...AAAGAGCCTGGCAAAGAACATCTGGTGGACACTCAGTGTTCCACTGCCTTGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509722.5
CDS-3UTR GCA 90 bp CCCACTGTCCACCCTCTGATAAGCCCTGGTGTGTGTTGTTCCCTCTATGTGTCCATGCTGTCGAGCAGTTaGCCCTCCTCATCCACTGTG +
Preference number: 4 (lower is better)
Translates to: PTVHPLISPGVCCSLYVSMLSSS*PSSSTV
Trigger: CACAGTGGATGAGGAGGGGCAACTGCTCGACAGCAT...GGACACATAGAGGGAACAACACACACCAGGGCTTATCAGAGGGTGGACAGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR GCA 90 bp AATTCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCATGCTGTCGAGCAGTTaGCCCTCCTCATCCACTGTG +
Preference number: 4 (lower is better)
Translates to: NSSCKSLARTCVTALPKPMLSSS*PSSSTV
Trigger: CACAGTGGATGAGGAGGGGCAACTGCTCGACAGCAT...GGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGAATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp CCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGCGGCTGTCTCAGAATaGACAGTCTATGAGAGCCGT +
Preference number: 4 (lower is better)
Translates to: PLANHWPEPVSRPCPSPKAAVSE*TVYESR
Trigger: ACGGCTCTCATAGACTGTGCATTCTGAGACAGCCGC...TTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp CAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGACTGTGCCGTATAGCTGGAGTTCTGGCTaGAGTTTAGCATGTTTCCAG +
Preference number: 4 (lower is better)
Translates to: QNLCHGPAQAPKDQTVPYSWSSG*SLACFQ
Trigger: CTGGAAACATGCTAAACTGCAGCCAGAACTCCAGCT...ATACGGCACAGTCTGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp CCCTGCTGGCACTCATTCTCTCTCCTGCTACCCTATGAAGAGGTGCCTTCTGCCGAGGGAAAGAGGCTCTaGAGGATCTTGTGCTGCCAA +
Preference number: 4 (lower is better)
Translates to: PCWHSFSLLLPYEEVPSAEGKRL*RILCCQ
Trigger: TTGGCAGCACAAGATCCTGCAGAGCCTCTTTCCCTC...GGCAGAAGGCACCTCTTCATAGGGTAGCAGGAGAGAGAATGAGTGCCAGCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR GCA 90 bp TTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACATCTCTTGGCCCACTTaGTTGGACTGTGTAGGGCAG +
Preference number: 4 (lower is better)
Translates to: LQIIGQNLCHGPAQAPKDISWPT*LDCVGQ
Trigger: CTGCCCTACACAGTCCAAGCAAGTGGGCCAAGAGAT...GTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458497.6
CDS-3UTR GCA 90 bp AATTCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCGCCCCTCTCCTTTGCTaGAATCTCTTGGCCCACTTG +
Preference number: 4 (lower is better)
Translates to: NSSCKSLARTCVTALPKPAPLLC*NLLAHL
Trigger: CAAGTGGGCCAAGAGATTGCAGCAAAGGAGAGGGGC...GGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGAATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458497.6
CDS-3UTR GCA 90 bp TCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAGTTCAGGGGTACATGTaGAGGTTTGTGTCATGGGGG +
Preference number: 4 (lower is better)
Translates to: SSCKSLARTCVTALPKPQVQGYM*RFVSWG
Trigger: CCCCCATGACACAAACCTGCACATGTACCCCTGAAC...TTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CCA 90 bp TGCTGTGCGGTCATCTGTCGCTCCACATCAGTGAAGTGGTGCCAGAGCCCCTTCGTATACCTAGCGACGTaGAGAGGCCCTTTTTATCCG +
Preference number: 4 (lower is better)
Translates to: CCAVICRSTSVKWCQSPFVYLAT*RGPFYP
Trigger: CGGATAAAAAGGGCCTCTCCACGTCGCTAGGTATAC...GAAGGGGCTCTGGCACCACTTCACTGATGTGGAGCGACAGATGACCGCACAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000505127.5
ENST00000509722.5
CDS-3UTR CCA 90 bp CCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGCGGACAGCAAATGGTaGTCAAACTCCTTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: PLANHWPEPVSRPCPSPKADSKW*SNSFSR
Trigger: CCTGCTGAAGGAGTTTGACCACCATTTGCTGTCCGC...TTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp AAGCAGCGGTCTCCTGACCCATTCTTGATAACTGTGGCAGAGGGAAAGAGGCTCGTCCCTGTCTCCCCATaGAGCCTTCTGTGCACTGTG +
Preference number: 4 (lower is better)
Translates to: KQRSPDPFLITVAEGKRLVPVSP*SLLCTV
Trigger: CACAGTGCACAGAAGGCTCCATGGGGAGACAGGGAC...GAGCCTCTTTCCCTCTGCCACAGTTATCAAGAATGGGTCAGGAGACCGCTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CCA 90 bp TTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAAGCACTGGAAGTCTaGCTGCCACTCAGAGACTTG +
Preference number: 4 (lower is better)
Translates to: LQIIGQNLCHGPAQAPKDQALEV*LPLRDL
Trigger: CAAGTCTCTGAGTGGCAGCCAGACTTCCAGTGCTTG...GTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp CCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAACAAGCACTGGAAGTCTaGCTGCCACTCAGAGACTTG +
Preference number: 4 (lower is better)
Translates to: PLANHWPEPVSRPCPSPKQALEV*LPLRDL
Trigger: CAAGTCTCTGAGTGGCAGCCAGACTTCCAGTGCTTG...TTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp CCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAAGTTGCTCCAAGCACTaGAAGTCTGGCTGCCACTCA +
Preference number: 4 (lower is better)
Translates to: PLANHWPEPVSRPCPSPKSCSKH*KSGCHS
Trigger: TGAGTGGCAGCCAGACTTCCAGTGCTTGGAGCAACT...TTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp TCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAATGCCAGGCTCTTTTCTaGCTGACCTGTCGTCAACGT +
Preference number: 4 (lower is better)
Translates to: SSCKSLARTCVTALPKPQCQALF*LTCRQR
Trigger: ACGTTGACGACAGGTCAGCCAGAAAAGAGCCTGGCA...TTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp GCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGGGCATCTGTTGCTGTaGCTGATTTTGAGAAGGCTC +
Preference number: 4 (lower is better)
Translates to: ANHWPEPVSRPCPSPKGPGHLLL*LILRRL
Trigger: GAGCCTTCTCAAAATCAGCCACAGCAACAGATGCCC...TGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp CAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGGGGCATCTGTTGCTGTaGCTGATTTTGAGAAGGCTC +
Preference number: 4 (lower is better)
Translates to: QIIGQNLCHGPAQAPKDQGHLLL*LILRRL
Trigger: GAGCCTTCTCAAAATCAGCCACAGCAACAGATGCCC...CTGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp CAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGACTGTGCCGTATGTGTGCCCATATTCTTaGGCCTACCAGAATCAGAAG +
Preference number: 4 (lower is better)
Translates to: QNLCHGPAQAPKDQTVPYVCPYS*AYQNQK
Trigger: CTTCTGATTCTGGTAGGCCCAAGAATATGGGCACAC...ATACGGCACAGTCTGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp TGGGGCTGTTTTCCATGTTGCTTTCCTTGCAGGACTTATGCCCAGAAGCAGCGGGCCCTGCTCTGCGACTaGGCCACCACTTTTTCTGGA +
Preference number: 4 (lower is better)
Translates to: WGCFPCCFPCRTYAQKQRALLCD*ATTFSG
Trigger: TCCAGAAAAAGTGGTGGCCCAGTCGCAGAGCAGGGC...CCGCTGCTTCTGGGCATAAGTCCTGCAAGGAAAGCAACATGGAAAACAGCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CCA 90 bp CAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGACTGTGCCGTATCCCAAGAACTCCCACTaGAATTCAGATAGGACCAAG +
Preference number: 4 (lower is better)
Translates to: QNLCHGPAQAPKDQTVPYPKNSH*NSDRTK
Trigger: CTTGGTCCTATCTGAATTCCAGTGGGAGTTCTTGGG...ATACGGCACAGTCTGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp GCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCACCTCTTGCAAATCATTaGCCAGAACCTGTGTCACGG +
Preference number: 4 (lower is better)
Translates to: ANHWPEPVSRPCPSPKGPPLANH*PEPVSR
Trigger: CCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGG...TGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp TCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAATGGCATTTCCCCTGCTaGCACTCATTCTCTCTCCTG +
Preference number: 4 (lower is better)
Translates to: SSCKSLARTCVTALPKPQWHFPC*HSFSLL
Trigger: CAGGAGAGAGAATGAGTGCCAGCAGGGGAAATGCCA...TTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CCA 90 bp CAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGAATTCCCATGTGTCATaGGAAGGACCTGGTAGGAGG +
Preference number: 4 (lower is better)
Translates to: QIIGQNLCHGPAQAPKDQNSHVS*EGPGRR
Trigger: CCTCCTACCAGGTCCTTCCCATGACACATGGGAATT...CTGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR TCA 90 bp GCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCACCCTTTTTATCCGGCTaGGGAAGTGCCAAATATCCT +
Preference number: 4 (lower is better)
Translates to: ANHWPEPVSRPCPSPKGPPFLSG*GSAKYP
Trigger: AGGATATTTGGCACTTCCTCAGCCGGATAAAAAGGG...TGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR TCA 90 bp GATACTGATCAATTCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCGGCGTATAGGCACTaGAGGCAGCTGCCAGCTTGC +
Preference number: 4 (lower is better)
Translates to: DTDQFLLQIIGQNLCHGPAAYRH*RQLPAC
Trigger: GCAAGCTGGCAGCTGCCTTCAGTGCCTATACGCCGC...AGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAGTATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR TCA 90 bp AATTCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCGGATATTCACAGCTGTaGGCACGAAGAGCGGCGTAT +
Preference number: 4 (lower is better)
Translates to: NSSCKSLARTCVTALPKPGYSQL*ARRAAY
Trigger: ATACGCCGCTCTTCGTGCTCACAGCTGTGAATATCC...GGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR TCA 90 bp TCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAGACCGAAAGCAGCTTTaGCAAAGCTGTGAAGCTCCT +
Preference number: 4 (lower is better)
Translates to: SSCKSLARTCVTALPKPQDRKQL*QSCEAP
Trigger: AGGAGCTTCACAGCTTTGTCAAAGCTGCTTTCGGTC...TTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR TCA 90 bp AAGCAGCGGTCTCCTGACCCATTCTTGATAACTGTGGCAGAGGGAAAGAGGCTCGCTTCCTTACAGAGCTaGCTTGCTGCATGGACCGTC +
Preference number: 4 (lower is better)
Translates to: KQRSPDPFLITVAEGKRLASLQS*LAAWTV
Trigger: GACGGTCCATGCAGCAAGTCAGCTCTGTAAGGAAGC...GAGCCTCTTTCCCTCTGCCACAGTTATCAAGAATGGGTCAGGAGACCGCTGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000650871.1
CDS-3UTR TCA 90 bp CTCTGCTGCTTCGTACCACATCCCCAGCTTTTGCAGAATCTGCCCTCTGATCTGGCTTCCTTACAGAGCTaGCTTGCTGCATGGACCGTC +
Preference number: 4 (lower is better)
Translates to: LCCFVPHPQLLQNLPSDLASLQS*LAAWTV
Trigger: GACGGTCCATGCAGCAAGTCAGCTCTGTAAGGAAGC...CAGATCAGAGGGCAGATTCTGCAAAAGCTGGGGATGTGGTACGAAGCAGCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509722.5
CDS-3UTR TCA 90 bp CCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAAAGGCAGTGGAACACTaGGTGTCCACCAGATGTTCT +
Preference number: 4 (lower is better)
Translates to: PLANHWPEPVSRPCPSPKKAVEH*VSTRCS
Trigger: AGAACATCTGGTGGACACTCAGTGTTCCACTGCCTT...TTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR TCA 90 bp AATTCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCATGCCTGGGGTATTATaGGGCGAGAAGGGTGTCAAG +
Preference number: 4 (lower is better)
Translates to: NSSCKSLARTCVTALPKPMPGVL*GEKGVK
Trigger: CTTGACACCCTTCTCGCCTCATAATACCCCAGGCAT...GGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR TCA 90 bp CAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGTGGGTCCCATATTTCTaGCTTCCTGGATACCTTCTG +
Preference number: 4 (lower is better)
Translates to: QIIGQNLCHGPAQAPKDQWVPYF*LPGYLL
Trigger: CAGAAGGTATCCAGGAAGTCAGAAATATGGGACCCA...CTGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR TCA 90 bp TTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACAGAAGCAGAACGATATaGGGGTCTGGAGTGAGCAGA +
Preference number: 4 (lower is better)
Translates to: LQIIGQNLCHGPAQAPKDRSRTI*GSGVSR
Trigger: TCTGCTCACTCCAGACCCTCATATCGTTCTGCTTCT...GTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR TCA 90 bp AATTCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCTCCCCTGCCTGTCTTTaGCATCGCAGTTGGTTTCTG +
Preference number: 4 (lower is better)
Translates to: NSSCKSLARTCVTALPKPSPACL*HRSWFL
Trigger: CAGAAACCAACTGCGATGTCAAAGACAGGCAGGGGA...GGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR TCA 90 bp TCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAACTGGAGTCAGGATTTTaGACAGGCCAATTAGGGGTG +
Preference number: 4 (lower is better)
Translates to: SSCKSLARTCVTALPKPQLESGF*TGQLGV
Trigger: CACCCCTAATTGGCCTGTTCAAAATCCTGACTCCAG...TTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR TCA 90 bp ACTGTGGCAGAGGGAAAGAGGCTCTGCAGGATCTTGTGCTGCCAATTAAATGCAGTCGCTCCACATCAGTaGAGTGGTGCCAGAGCCCCT +
Preference number: 4 (lower is better)
Translates to: TVAEGKRLCRILCCQLNAVAPHQ*SGARAP
Trigger: AGGGGCTCTGGCACCACTTCACTGATGTGGAGCGAC...TGCATTTAATTGGCAGCACAAGATCCTGCAGAGCCTCTTTCCCTCTGCCACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR TCA 90 bp TGGCTTTATAAGCATCTGGCATTTCCCCTGCTGGCACTCATTCTCTCTCCTGCTGTCGCTCCACATCAGTaGAGTGGTGCCAGAGCCCCT +
Preference number: 4 (lower is better)
Translates to: WLYKHLAFPLLALILSPAVAPHQ*SGARAP
Trigger: AGGGGCTCTGGCACCACTTCACTGATGTGGAGCGAC...AGCAGGAGAGAGAATGAGTGCCAGCAGGGGAAATGCCAGATGCTTATAAAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR TCA 90 bp CAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGCTGGTAGGAGGTAATTaGGGCAGTTTTTCCCATGCT +
Preference number: 4 (lower is better)
Translates to: QIIGQNLCHGPAQAPKDQLVGGN*GSFSHA
Trigger: AGCATGGGAAAAACTGCCTCAATTACCTCCTACCAG...CTGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR GCA 90 bp GCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAACGGCTTGTTTGTACTaGCACTTTTCAGGCACGAAG +
Preference number: 4 (lower is better)
Translates to: ANHWPEPVSRPCPSPKGPTACLY*HFSGTK
Trigger: CTTCGTGCCTGAAAAGTGGCAGTACAAACAAGCCGT...TGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000505127.5
ENST00000650871.1
CDS-3UTR GCA 90 bp CCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAAGACCTTTGGCGACCTaGAGAAGTTTTCCAGAGACG +
Preference number: 4 (lower is better)
Translates to: PLANHWPEPVSRPCPSPKRPLAT*RSFPET
Trigger: CGTCTCTGGAAAACTTCTGCAGGTCGCCAAAGGTCT...TTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp AATTCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCATTGGCGTGGCTGGCTaGAACTTGTGGAGACCTTTG +
Preference number: 4 (lower is better)
Translates to: NSSCKSLARTCVTALPKPIGVAG*NLWRPL
Trigger: CAAAGGTCTCCACAAGTTGCAGCCAGCCACGCCAAT...GGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp TGCTGTGCGGTCATCTGTCGCTCCACATCAGTGAAGTGGTGCCAGAGCCCCTTCTGTATACAGACCGACTaGACCAGGACCTTGTCACTT +
Preference number: 4 (lower is better)
Translates to: CCAVICRSTSVKWCQSPFCIQTD*TRTLSL
Trigger: AAGTGACAAGGTCCTGGTGCAGTCGGTCTGTATACA...GAAGGGGCTCTGGCACCACTTCACTGATGTGGAGCGACAGATGACCGCACAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505127.5
ENST00000509722.5
CDS-3UTR GCA 90 bp TGGGGCTGTTTTCCATGTTGCTTTCCTTGCAGGACTTATGCCCAGAAGCAGCGGCAGCTTGCAGGCTTCTaGAGCGGACAGCAAATGGTG +
Preference number: 4 (lower is better)
Translates to: WGCFPCCFPCRTYAQKQRQLAGF*SGQQMV
Trigger: CACCATTTGCTGTCCGCTGCAGAAGCCTGCAAGCTG...CCGCTGCTTCTGGGCATAAGTCCTGCAAGGAAAGCAACATGGAAAACAGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000650871.1
CDS-3UTR GCA 90 bp AATTCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCCATGGAGCCTTCTGTaGACTGTGGTGAGACCGAAA +
Preference number: 4 (lower is better)
Translates to: NSSCKSLARTCVTALPKPPWSLL*TVVRPK
Trigger: TTTCGGTCTCACCACAGTGCACAGAAGGCTCCATGG...GGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGAATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp CCCACTGTCCACCCTCTGATAAGCCCTGGTGTGTGTTGTTCCCTCTATGTGTCCCCATGGAGCCTTCTGTaGACTGTGGTGAGACCGAAA +
Preference number: 4 (lower is better)
Translates to: PTVHPLISPGVCCSLYVSPWSLL*TVVRPK
Trigger: TTTCGGTCTCACCACAGTGCACAGAAGGCTCCATGG...GGACACATAGAGGGAACAACACACACCAGGGCTTATCAGAGGGTGGACAGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR GCA 90 bp AAGCAGCGGTCTCCTGACCCATTCTTGATAACTGTGGCAGAGGGAAAGAGGCTCACAGAGCTGACTTGCTaGATGGACCGTCCCTGTCTC +
Preference number: 4 (lower is better)
Translates to: KQRSPDPFLITVAEGKRLTELTC*MDRPCL
Trigger: GAGACAGGGACGGTCCATGCAGCAAGTCAGCTCTGT...GAGCCTCTTTCCCTCTGCCACAGTTATCAAGAATGGGTCAGGAGACCGCTGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000650871.1
CDS-3UTR GCA 90 bp CAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGGTACAGCTTCCCCATTaGTTCCTTACAGAGCTGACT +
Preference number: 4 (lower is better)
Translates to: QIIGQNLCHGPAQAPKDQVQLPH*FLTELT
Trigger: AGTCAGCTCTGTAAGGAAGCAATGGGGAAGCTGTAC...CTGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp TGGCATTTCCCCTGCTGGCACTCATTCTCTCTCCTGCTACCCTATGAAGAGGTGCCCTGCTCTTTCCCCTaGCTGTCTTTGACATCGCAG +
Preference number: 4 (lower is better)
Translates to: WHFPCWHSFSLLLPYEEVPCSFP*LSLTSQ
Trigger: CTGCGATGTCAAAGACAGGCAGGGGAAAGAGCAGGG...CACCTCTTCATAGGGTAGCAGGAGAGAGAATGAGTGCCAGCAGGGGAAATGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR GCA 90 bp AAGCAGCGGTCTCCTGACCCATTCTTGATAACTGTGGCAGAGGGAAAGAGGCTCATGCTGTCGAGCAGTTaGCCCTCCTCATCCACTGTG +
Preference number: 4 (lower is better)
Translates to: KQRSPDPFLITVAEGKRLMLSSS*PSSSTV
Trigger: CACAGTGGATGAGGAGGGGCAACTGCTCGACAGCAT...GAGCCTCTTTCCCTCTGCCACAGTTATCAAGAATGGGTCAGGAGACCGCTGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000650871.1
CDS-3UTR GCA 90 bp CAGCTTGCAGGCTTCTGCAGCGGACAGCAAATGGTGGTCAAACTCCTTCAGCAGAGCCGTGCCCATTTGTaGAGGGAACATCCATGCTGT +
Preference number: 4 (lower is better)
Translates to: QLAGFCSGQQMVVKLLQQSRAHL*REHPCC
Trigger: ACAGCATGGATGTTCCCTGCACAAATGGGCACGGCT...CTGCTGAAGGAGTTTGACCACCATTTGCTGTCCGCTGCAGAAGCCTGCAAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509722.5
CDS-3UTR GCA 90 bp AATTCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCGCGGCTGTCTCAGAATaGACAGTCTATGAGAGCCGT +
Preference number: 4 (lower is better)
Translates to: NSSCKSLARTCVTALPKPAAVSE*TVYESR
Trigger: ACGGCTCTCATAGACTGTGCATTCTGAGACAGCCGC...GGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp CCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAACAAAAGAGCACTATGTaGTCGGTGGAGTTGACTGGG +
Preference number: 4 (lower is better)
Translates to: PLANHWPEPVSRPCPSPKQKSTM*SVELTG
Trigger: CCCAGTCAACTCCACCGAGCACATAGTGCTCTTTTG...TTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp TCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAACAAAAGAGCACTATGTaGTCGGTGGAGTTGACTGGG +
Preference number: 4 (lower is better)
Translates to: SSCKSLARTCVTALPKPQQKSTM*SVELTG
Trigger: CCCAGTCAACTCCACCGAGCACATAGTGCTCTTTTG...TTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp AAGCAGCGGTCTCCTGACCCATTCTTGATAACTGTGGCAGAGGGAAAGAGGCTCACATCAGTGAAGTGGTaGCAGAGCCCCTTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: KQRSPDPFLITVAEGKRLTSVKW*QSPFCS
Trigger: GGAGCAGAAGGGGCTCTGGCACCACTTCACTGATGT...GAGCCTCTTTCCCTCTGCCACAGTTATCAAGAATGGGTCAGGAGACCGCTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000650871.1
CDS-3UTR GCA 90 bp AATTCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCGAGGGAAAGAGGCTCTaGAGGATCTTGTGCTGCCAA +
Preference number: 4 (lower is better)
Translates to: NSSCKSLARTCVTALPKPEGKRL*RILCCQ
Trigger: TTGGCAGCACAAGATCCTGCAGAGCCTCTTTCCCTC...GGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp CAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGACTGTGCCGTATTGCCTTTCTCAAGAGTaGTTTTCATCCCTCATGGGT +
Preference number: 4 (lower is better)
Translates to: QNLCHGPAQAPKDQTVPYCLSQE*FSSLMG
Trigger: ACCCATGAGGGATGAAAAGCACTCTTGAGAAAGGCA...ATACGGCACAGTCTGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000650871.1
CDS-3UTR GCA 90 bp CAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGACTCATTCTCTCTCCTaGTACCCTATGAAGAGGTGC +
Preference number: 4 (lower is better)
Translates to: QIIGQNLCHGPAQAPKDQTHSLS*YPMKRC
Trigger: GCACCTCTTCATAGGGTAGCAGGAGAGAGAATGAGT...CTGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CCA 90 bp GCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAATGATTACGATGAATTaGGTGTCCCTGGGTCTAGGG +
Preference number: 4 (lower is better)
Translates to: ANHWPEPVSRPCPSPKGPMITMN*VSLGLG
Trigger: CCCTAGACCCAGGGACACCCAATTCATCGTAATCAT...TGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp CAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGATGATTACGATGAATTaGGTGTCCCTGGGTCTAGGG +
Preference number: 4 (lower is better)
Translates to: QIIGQNLCHGPAQAPKDQMITMN*VSLGLG
Trigger: CCCTAGACCCAGGGACACCCAATTCATCGTAATCAT...CTGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp CAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGATTTCCTTTGCCTCCTaGATCAGGGTCCTTAACTCG +
Preference number: 4 (lower is better)
Translates to: QIIGQNLCHGPAQAPKDQISFAS*IRVLNS
Trigger: CGAGTTAAGGACCCTGATCCAGGAGGCAAAGGAAAT...CTGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000505127.5
ENST00000650871.1
CDS-3UTR CCA 90 bp CAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGGTTTGTTTTGTCCTCTaGGCCCACGGCTTGTTTGTA +
Preference number: 4 (lower is better)
Translates to: QIIGQNLCHGPAQAPKDQVCFVL*AHGLFV
Trigger: TACAAACAAGCCGTGGGCCCAGAGGACAAAACAAAC...CTGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000505127.5
ENST00000650871.1
CDS-3UTR CCA 90 bp ACTGTGGCAGAGGGAAAGAGGCTCTGCAGGATCTTGTGCTGCCAATTAAATGCACACCTGCGGGGCAATTaGCGTGGCTGGCTGCAACTT +
Preference number: 4 (lower is better)
Translates to: TVAEGKRLCRILCCQLNAHLRGN*RGWLQL
Trigger: AAGTTGCAGCCAGCCACGCCAATTGCCCCGCAGGTG...TGCATTTAATTGGCAGCACAAGATCCTGCAGAGCCTCTTTCCCTCTGCCACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp CCTCTGACCAGGCGGCTGTCTCAGAATGCACAGTCTATGAGAGCCGTGCCCATTGTATACCTAGCGACGTaGAGAGGCCCTTTTTATCCG +
Preference number: 4 (lower is better)
Translates to: PLTRRLSQNAQSMRAVPIVYLAT*RGPFYP
Trigger: CGGATAAAAAGGGCCTCTCCACGTCGCTAGGTATAC...AATGGGCACGGCTCTCATAGACTGTGCATTCTGAGACAGCCGCCTGGTCAGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509722.5
CDS-3UTR CCA 90 bp CCCAAGAACTCCCACTGGAATTCAGATAGGACCAAGGGCTGTCCCCCTCAGAAGGCAGCGGACAGCAAATaGTGGTCAAACTCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: PKNSHWNSDRTKGCPPQKAADSK*WSNSFS
Trigger: GCTGAAGGAGTTTGACCACCATTTGCTGTCCGCTGC...CTTCTGAGGGGGACAGCCCTTGGTCCTATCTGAATTCCAGTGGGAGTTCTTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509722.5
CDS-3UTR CCA 90 bp CCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAATTGCTGTAGTCCGATaGCTCAGTCTCAGTCTCCAC +
Preference number: 4 (lower is better)
Translates to: PLANHWPEPVSRPCPSPKIAVVR*LSLSLH
Trigger: GTGGAGACTGAGACTGAGCCATCGGACTACAGCAAT...TTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp CCCACTGTCCACCCTCTGATAAGCCCTGGTGTGTGTTGTTCCCTCTATGTGTCCTGCCAGGCTCTTTTCTaGCTGACCTGTCGTCAACGT +
Preference number: 4 (lower is better)
Translates to: PTVHPLISPGVCCSLYVSCQALF*LTCRQR
Trigger: ACGTTGACGACAGGTCAGCCAGAAAAGAGCCTGGCA...GGACACATAGAGGGAACAACACACACCAGGGCTTATCAGAGGGTGGACAGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CCA 90 bp AATTCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCTGCCAGGCTCTTTTCTaGCTGACCTGTCGTCAACGT +
Preference number: 4 (lower is better)
Translates to: NSSCKSLARTCVTALPKPCQALF*LTCRQR
Trigger: ACGTTGACGACAGGTCAGCCAGAAAAGAGCCTGGCA...GGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp TGCTGTGCGGTCATCTGTCGCTCCACATCAGTGAAGTGGTGCCAGAGCCCCTTCGGTGAAGGAGCTACATaGCAGCATGGAAATGTTTCC +
Preference number: 4 (lower is better)
Translates to: CCAVICRSTSVKWCQSPFGEGAT*QHGNVS
Trigger: GGAAACATTTCCATGCTGCCATGTAGCTCCTTCACC...GAAGGGGCTCTGGCACCACTTCACTGATGTGGAGCGACAGATGACCGCACAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509722.5
CDS-3UTR CCA 90 bp CAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGACTGTGCCGTATGGCCACCACTTTTTCTaGAGTCAGGATTTTGAACAG +
Preference number: 4 (lower is better)
Translates to: QNLCHGPAQAPKDQTVPYGHHFF*SQDFEQ
Trigger: CTGTTCAAAATCCTGACTCCAGAAAAAGTGGTGGCC...ATACGGCACAGTCTGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp GGGAACATCCATGCTGTCGAGCAGTTGCCCCTCCTCATCCACTGTGGAGGCATCACACTGAGGATGAGCTaGAGTTCTGGCTGCAGTTTA +
Preference number: 4 (lower is better)
Translates to: GNIHAVEQLPLLIHCGGITLRMS*SSGCSL
Trigger: TAAACTGCAGCCAGAACTCCAGCTCATCCTCAGTGT...GATGCCTCCACAGTGGATGAGGAGGGGCAACTGCTCGACAGCATGGATGTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509722.5
CDS-3UTR CCA 90 bp GCTTACAGAGGAATTGGGGGTCTCCGCCCTCTGACCAGGCGGCTGTCTCAGAATCCCAAGAACTCCCACTaGAATTCAGATAGGACCAAG +
Preference number: 4 (lower is better)
Translates to: AYRGIGGLRPLTRRLSQNPKNSH*NSDRTK
Trigger: CTTGGTCCTATCTGAATTCCAGTGGGAGTTCTTGGG...ATTCTGAGACAGCCGCCTGGTCAGAGGGCGGAGACCCCCAATTCCTCTGTAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509722.5
CDS-3UTR CCA 90 bp CCCTGCTGGCACTCATTCTCTCTCCTGCTACCCTATGAAGAGGTGCCTTCTGCCCCTCTTGCAAATCATTaGCCAGAACCTGTGTCACGG +
Preference number: 4 (lower is better)
Translates to: PCWHSFSLLLPYEEVPSAPLANH*PEPVSR
Trigger: CCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGG...GGCAGAAGGCACCTCTTCATAGGGTAGCAGGAGAGAGAATGAGTGCCAGCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CCA 90 bp TCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGCAGGAGGAAAACTaGAGAAGCCAGGACAGAAGA +
Preference number: 4 (lower is better)
Translates to: SSCKSLARTCVTALPKPQRQEEN*RSQDRR
Trigger: TCTTCTGTCCTGGCTTCTCCAGTTTTCCTCCTGCCT...TTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458497.6
CDS-3UTR CCA 90 bp TGGCTTTATAAGCATCTGGCATTTCCCCTGCTGGCACTCATTCTCTCTCCTGCTACGCCTCTGCAGCGCTaGTCCTCGCTCTTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: WLYKHLAFPLLALILSPATPLQR*SSLLSS
Trigger: AGAGGACAAGAGCGAGGACCAGCGCTGCAGAGGCGT...AGCAGGAGAGAGAATGAGTGCCAGCAGGGGAAATGCCAGATGCTTATAAAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504176.6
3UTR CAA 72 bp GTCTCAGAATGCACAGTCTATGAGAGCCGTGCCCATTaGTGCAGGGAACATCCATGCTGTCGAGCAGTTGCC +
Preference number: 4 (lower is better)
Translates to: VSECTVYESRAH*CREHPCCRAVA
Trigger: GGCAACTGCTCGACAGCATGGATGTTCCCTGCACAAATGGGCACGGCTCTCATAGACTGTGCATTCTGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509722.5
CDS-3UTR TCA 90 bp AAGCAGCGGTCTCCTGACCCATTCTTGATAACTGTGGCAGAGGGAAAGAGGCTCGCTTCCAACAAGAGCTaGTCCAGCACTTGCTTGCAC +
Preference number: 4 (lower is better)
Translates to: KQRSPDPFLITVAEGKRLASNKS*SSTCLH
Trigger: GTGCAAGCAAGTGCTGGATCAGCTCTTGTTGGAAGC...GAGCCTCTTTCCCTCTGCCACAGTTATCAAGAATGGGTCAGGAGACCGCTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000650871.1
CDS-3UTR TCA 90 bp TGGGGCTGTTTTCCATGTTGCTTTCCTTGCAGGACTTATGCCCAGAAGCAGCGGGCTTCCAACAAGAGCTaGTCCAGCACTTGCTTGCAC +
Preference number: 4 (lower is better)
Translates to: WGCFPCCFPCRTYAQKQRASNKS*SSTCLH
Trigger: GTGCAAGCAAGTGCTGGATCAGCTCTTGTTGGAAGC...CCGCTGCTTCTGGGCATAAGTCCTGCAAGGAAAGCAACATGGAAAACAGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000650871.1
CDS-3UTR TCA 90 bp AAGCAGCGGTCTCCTGACCCATTCTTGATAACTGTGGCAGAGGGAAAGAGGCTCGGATATTCACAGCTGTaGGCACGAAGAGCGGCGTAT +
Preference number: 4 (lower is better)
Translates to: KQRSPDPFLITVAEGKRLGYSQL*ARRAAY
Trigger: ATACGCCGCTCTTCGTGCTCACAGCTGTGAATATCC...GAGCCTCTTTCCCTCTGCCACAGTTATCAAGAATGGGTCAGGAGACCGCTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000650871.1
CDS-3UTR TCA 90 bp GCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGCTTTGACAAAGCTGTaGAGCTCCTGTTTTCCAGTA +
Preference number: 4 (lower is better)
Translates to: ANHWPEPVSRPCPSPKGPALTKL*SSCFPV
Trigger: TACTGGAAAACAGGAGCTTCACAGCTTTGTCAAAGC...TGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR TCA 90 bp CAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGGCTTTGACAAAGCTGTaGAGCTCCTGTTTTCCAGTA +
Preference number: 4 (lower is better)
Translates to: QIIGQNLCHGPAQAPKDQALTKL*SSCFPV
Trigger: TACTGGAAAACAGGAGCTTCACAGCTTTGTCAAAGC...CTGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR TCA 90 bp AATTCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCTCCTTCCTCCCCTTCTaGGTTCCCTCTGAACATTCT +
Preference number: 4 (lower is better)
Translates to: NSSCKSLARTCVTALPKPSFLPF*VPSEHS
Trigger: AGAATGTTCAGAGGGAACTCAGAAGGGGAGGAAGGA...GGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR TCA 90 bp GCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCATCAGTCTCCACATCTTaGTCCAAGGAGACTCGAAAT +
Preference number: 4 (lower is better)
Translates to: ANHWPEPVSRPCPSPKGPSVSTS*SKETRN
Trigger: ATTTCGAGTCTCCTTGGATCAAGATGTGGAGACTGA...TGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR TCA 90 bp CCCAAGAACTCCCACTGGAATTCAGATAGGACCAAGGGCTGTCCCCCTCAGAAGAAGGCAGTGGAACACTaGGTGTCCACCAGATGTTCT +
Preference number: 4 (lower is better)
Translates to: PKNSHWNSDRTKGCPPQKKAVEH*VSTRCS
Trigger: AGAACATCTGGTGGACACTCAGTGTTCCACTGCCTT...CTTCTGAGGGGGACAGCCCTTGGTCCTATCTGAATTCCAGTGGGAGTTCTTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509722.5
CDS-3UTR TCA 90 bp CCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAATGGGTCCCATATTTCTaGCTTCCTGGATACCTTCTG +
Preference number: 4 (lower is better)
Translates to: PLANHWPEPVSRPCPSPKWVPYF*LPGYLL
Trigger: CAGAAGGTATCCAGGAAGTCAGAAATATGGGACCCA...TTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR TCA 90 bp CCTCTGACCAGGCGGCTGTCTCAGAATGCACAGTCTATGAGAGCCGTGCCCATTTGGGTCCCATATTTCTaGCTTCCTGGATACCTTCTG +
Preference number: 4 (lower is better)
Translates to: PLTRRLSQNAQSMRAVPIWVPYF*LPGYLL
Trigger: CAGAAGGTATCCAGGAAGTCAGAAATATGGGACCCA...AATGGGCACGGCTCTCATAGACTGTGCATTCTGAGACAGCCGCCTGGTCAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509722.5
CDS-3UTR TCA 90 bp TTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACTGGGTCCCATATTTCTaGCTTCCTGGATACCTTCTG +
Preference number: 4 (lower is better)
Translates to: LQIIGQNLCHGPAQAPKDWVPYF*LPGYLL
Trigger: CAGAAGGTATCCAGGAAGTCAGAAATATGGGACCCA...GTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR TCA 90 bp AAGCAGCGGTCTCCTGACCCATTCTTGATAACTGTGGCAGAGGGAAAGAGGCTCTCCCCTGCCTGTCTTTaGCATCGCAGTTGGTTTCTG +
Preference number: 4 (lower is better)
Translates to: KQRSPDPFLITVAEGKRLSPACL*HRSWFL
Trigger: CAGAAACCAACTGCGATGTCAAAGACAGGCAGGGGA...GAGCCTCTTTCCCTCTGCCACAGTTATCAAGAATGGGTCAGGAGACCGCTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000650871.1
CDS-3UTR TCA 90 bp CAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGGTATTCTCTAGTCTCTaGAACAGCCAATCATGCCTC +
Preference number: 4 (lower is better)
Translates to: QIIGQNLCHGPAQAPKDQVFSSL*NSQSCL
Trigger: GAGGCATGATTGGCTGTTTCAGAGACTAGAGAATAC...CTGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR TCA 90 bp AATTCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCAATAAAGGAGCCCCTTaGAGGCCGAAGTACCCAAAG +
Preference number: 4 (lower is better)
Translates to: NSSCKSLARTCVTALPKPNKGAP*RPKYPK
Trigger: CTTTGGGTACTTCGGCCTTCAAGGGGCTCCTTTATT...GGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505127.5
ENST00000650871.1
CDS-3UTR GCA 90 bp GATACTGATCAATTCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTAGGGACGCCAGTAACTaGTGCAACCCGGCGCCAATC +
Preference number: 4 (lower is better)
Translates to: DTDQFLLQIIGQNLCHGPRDASN*CNPAPI
Trigger: GATTGGCGCCGGGTTGCAGCAGTTACTGGCGTCCCT...AGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAGTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000505127.5
ENST00000650871.1
CDS-3UTR GCA 90 bp GCAGAGGGAAAGAGGCTCTGCAGGATCTTGTGCTGCCAATTAAATGCAGGACTTTGGCGAATAACCACCTaGGGGGCAATTGGCGTGGCT +
Preference number: 4 (lower is better)
Translates to: AEGKRLCRILCCQLNAGLWRITT*GAIGVA
Trigger: AGCCACGCCAATTGCCCCGCAGGTGGTTATTCGCCA...AAGTCCTGCATTTAATTGGCAGCACAAGATCCTGCAGAGCCTCTTTCCCTCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp TTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACTGTATACAGACCGACTaGACCAGGACCTTGTCACTT +
Preference number: 4 (lower is better)
Translates to: LQIIGQNLCHGPAQAPKDCIQTD*TRTLSL
Trigger: AAGTGACAAGGTCCTGGTGCAGTCGGTCTGTATACA...GTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp GCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAATCCGGCTGAGGAAGTaGCAAATATCCTACAATGGA +
Preference number: 4 (lower is better)
Translates to: ANHWPEPVSRPCPSPKGPIRLRK*QISYNG
Trigger: TCCATTGTAGGATATTTGGCACTTCCTCAGCCGGAT...TGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp GATACTGATCAATTCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTAGGCAGCTGCCAGCTTaGAGGCTTCTGCAGCGGACA +
Preference number: 4 (lower is better)
Translates to: DTDQFLLQIIGQNLCHGPRQLPA*RLLQRT
Trigger: TGTCCGCTGCAGAAGCCTGCAAGCTGGCAGCTGCCT...AGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAGTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp GATACTGATCAATTCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGGCACTGAAGGCAGCTaGCAGCTTGCAGGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: DTDQFLLQIIGQNLCHGPGTEGS*QLAGFC
Trigger: GCAGAAGCCTGCAAGCTGGCAGCTGCCTTCAGTGCC...AGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAGTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp GCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAAGGACAATAAACACGTaGCACGGATATTCACAGCTG +
Preference number: 4 (lower is better)
Translates to: ANHWPEPVSRPCPSPKGPRTINT*HGYSQL
Trigger: CAGCTGTGAATATCCGTGGCACGTGTTTATTGTCCT...TGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp TGGGGCTGTTTTCCATGTTGCTTTCCTTGCAGGACTTATGCCCAGAAGCAGCGGCCATGGAGCCTTCTGTaGACTGTGGTGAGACCGAAA +
Preference number: 4 (lower is better)
Translates to: WGCFPCCFPCRTYAQKQRPWSLL*TVVRPK
Trigger: TTTCGGTCTCACCACAGTGCACAGAAGGCTCCATGG...CCGCTGCTTCTGGGCATAAGTCCTGCAAGGAAAGCAACATGGAAAACAGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000650871.1
CDS-3UTR GCA 90 bp TTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACGTACAGCTTCCCCATTaGTTCCTTACAGAGCTGACT +
Preference number: 4 (lower is better)
Translates to: LQIIGQNLCHGPAQAPKDVQLPH*FLTELT
Trigger: AGTCAGCTCTGTAAGGAAGCAATGGGGAAGCTGTAC...GTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp GGGAACATCCATGCTGTCGAGCAGTTGCCCCTCCTCATCCACTGTGGAGGCATCTGTGAATGCAATGAATaGATAGCTCTGCCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: GNIHAVEQLPLLIHCGGICECNE*IALPSL
Trigger: CAGGGAAGGCAGAGCTATGCATTCATTGCATTCACA...GATGCCTCCACAGTGGATGAGGAGGGGCAACTGCTCGACAGCATGGATGTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509722.5
CDS-3UTR GCA 90 bp GCAGAGGGAAAGAGGCTCTGCAGGATCTTGTGCTGCCAATTAAATGCAGGACTTGTCGATGCCCTGCTCTaGGACTGGGCCACCACTTTT +
Preference number: 4 (lower is better)
Translates to: AEGKRLCRILCCQLNAGLVDALL*DWATTF
Trigger: AAAAGTGGTGGCCCAGTCGCAGAGCAGGGCATCGAC...AAGTCCTGCATTTAATTGGCAGCACAAGATCCTGCAGAGCCTCTTTCCCTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp TGGGGCTGTTTTCCATGTTGCTTTCCTTGCAGGACTTATGCCCAGAAGCAGCGGAGCCGTGCCCATTTGTaGAGGGAACATCCATGCTGT +
Preference number: 4 (lower is better)
Translates to: WGCFPCCFPCRTYAQKQRSRAHL*REHPCC
Trigger: ACAGCATGGATGTTCCCTGCACAAATGGGCACGGCT...CCGCTGCTTCTGGGCATAAGTCCTGCAAGGAAAGCAACATGGAAAACAGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000650871.1
CDS-3UTR GCA 90 bp TCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGCTGGAGTTCTGGCTaGAGTTTAGCATGTTTCCAG +
Preference number: 4 (lower is better)
Translates to: SSCKSLARTCVTALPKPQSWSSG*SLACFQ
Trigger: CTGGAAACATGCTAAACTGCAGCCAGAACTCCAGCT...TTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp CCCTGCTGGCACTCATTCTCTCTCCTGCTACCCTATGAAGAGGTGCCTTCTGCCAGCTGGAGTTCTGGCTaGAGTTTAGCATGTTTCCAG +
Preference number: 4 (lower is better)
Translates to: PCWHSFSLLLPYEEVPSASWSSG*SLACFQ
Trigger: CTGGAAACATGCTAAACTGCAGCCAGAACTCCAGCT...GGCAGAAGGCACCTCTTCATAGGGTAGCAGGAGAGAGAATGAGTGCCAGCAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR GCA 90 bp AATTCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCTCAAAGTCATCAGGTTaGAAGGTGCGAGCCTCAAGG +
Preference number: 4 (lower is better)
Translates to: NSSCKSLARTCVTALPKPSKSSG*KVRASR
Trigger: CCTTGAGGCTCGCACCTTGCAACCTGATGACTTTGA...GGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp CAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGACTGTGCCGTATTGCAGGATCTTGTGCTaGCAATTAAATGCAGGACTT +
Preference number: 4 (lower is better)
Translates to: QNLCHGPAQAPKDQTVPYCRILC*QLNAGL
Trigger: AAGTCCTGCATTTAATTGGCAGCACAAGATCCTGCA...ATACGGCACAGTCTGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp GAAGTGGTGCCAGAGCCCCTTCTGCTCCTTATAGTCTTTCCCAACATACCTCCCGAGGGAAAGAGGCTCTaGAGGATCTTGTGCTGCCAA +
Preference number: 4 (lower is better)
Translates to: EVVPEPLLLLIVFPNIPPEGKRL*RILCCQ
Trigger: TTGGCAGCACAAGATCCTGCAGAGCCTCTTTCCCTC...GGGAGGTATGTTGGGAAAGACTATAAGGAGCAGAAGGGGCTCTGGCACCACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505127.5
ENST00000509722.5
CDS-3UTR GCA 90 bp TGCTGTGCGGTCATCTGTCGCTCCACATCAGTGAAGTGGTGCCAGAGCCCCTTCTGCCTTTCTCAAGAGTaGTTTTCATCCCTCATGGGT +
Preference number: 4 (lower is better)
Translates to: CCAVICRSTSVKWCQSPFCLSQE*FSSLMG
Trigger: ACCCATGAGGGATGAAAAGCACTCTTGAGAAAGGCA...GAAGGGGCTCTGGCACCACTTCACTGATGTGGAGCGACAGATGACCGCACAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505127.5
CDS-3UTR GCA 90 bp AAGCAGCGGTCTCCTGACCCATTCTTGATAACTGTGGCAGAGGGAAAGAGGCTCGTTCAGGGGTACATGTaGAGGTTTGTGTCATGGGGG +
Preference number: 4 (lower is better)
Translates to: KQRSPDPFLITVAEGKRLVQGYM*RFVSWG
Trigger: CCCCCATGACACAAACCTGCACATGTACCCCTGAAC...GAGCCTCTTTCCCTCTGCCACAGTTATCAAGAATGGGTCAGGAGACCGCTGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CCA 90 bp AAGCAGCGGTCTCCTGACCCATTCTTGATAACTGTGGCAGAGGGAAAGAGGCTCCTCTTCCGACACATCTaGCGCTTCCAACAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: KQRSPDPFLITVAEGKRLLFRHI*RFQQEL
Trigger: CAGCTCTTGTTGGAAGCGCCAGATGTGTCGGAAGAG...GAGCCTCTTTCCCTCTGCCACAGTTATCAAGAATGGGTCAGGAGACCGCTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000650871.1
CDS-3UTR CCA 90 bp TCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAATTTCCTTTGCCTCCTaGATCAGGGTCCTTAACTCG +
Preference number: 4 (lower is better)
Translates to: SSCKSLARTCVTALPKPQISFAS*IRVLNS
Trigger: CGAGTTAAGGACCCTGATCCAGGAGGCAAAGGAAAT...TTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000505127.5
ENST00000650871.1
CDS-3UTR CCA 90 bp CCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAATTTCCTTTGCCTCCTaGATCAGGGTCCTTAACTCG +
Preference number: 4 (lower is better)
Translates to: PLANHWPEPVSRPCPSPKISFAS*IRVLNS
Trigger: CGAGTTAAGGACCCTGATCCAGGAGGCAAAGGAAAT...TTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000505127.5
ENST00000650871.1
CDS-3UTR CCA 90 bp TCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAGTTTGTTTTGTCCTCTaGGCCCACGGCTTGTTTGTA +
Preference number: 4 (lower is better)
Translates to: SSCKSLARTCVTALPKPQVCFVL*AHGLFV
Trigger: TACAAACAAGCCGTGGGCCCAGAGGACAAAACAAAC...TTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000505127.5
ENST00000650871.1
CDS-3UTR CCA 90 bp TCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAACTTGTGGAGACCTTTaGCGACCTGCAGAAGTTTTC +
Preference number: 4 (lower is better)
Translates to: SSCKSLARTCVTALPKPQTCGDL*RPAEVF
Trigger: GAAAACTTCTGCAGGTCGCCAAAGGTCTCCACAAGT...TTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp GCAGAGGGAAAGAGGCTCTGCAGGATCTTGTGCTGCCAATTAAATGCAGGACTTGCTGGCTGCAACTTGTaGAGACCTTTGGCGACCTGC +
Preference number: 4 (lower is better)
Translates to: AEGKRLCRILCCQLNAGLAGCNL*RPLATC
Trigger: GCAGGTCGCCAAAGGTCTCCACAAGTTGCAGCCAGC...AAGTCCTGCATTTAATTGGCAGCACAAGATCCTGCAGAGCCTCTTTCCCTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp GATACTGATCAATTCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCGGGGCAATTGGCGTaGCTGGCTGCAACTTGTGGA +
Preference number: 4 (lower is better)
Translates to: DTDQFLLQIIGQNLCHGPAGQLA*LAATCG
Trigger: TCCACAAGTTGCAGCCAGCCACGCCAATTGCCCCGC...AGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAGTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp GATACTGATCAATTCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTCACCTGCGGGGCAATTaGCGTGGCTGGCTGCAACTT +
Preference number: 4 (lower is better)
Translates to: DTDQFLLQIIGQNLCHGPHLRGN*RGWLQL
Trigger: AAGTTGCAGCCAGCCACGCCAATTGCCCCGCAGGTG...AGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAGTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp ACTGTGGCAGAGGGAAAGAGGCTCTGCAGGATCTTGTGCTGCCAATTAAATGCAACGGAGATTCGGGCTTaGCGAATAACCACCTGCGGG +
Preference number: 4 (lower is better)
Translates to: TVAEGKRLCRILCCQLNATEIRA*RITTCG
Trigger: CCCGCAGGTGGTTATTCGCCAAGCCCGAATCTCCGT...TGCATTTAATTGGCAGCACAAGATCCTGCAGAGCCTCTTTCCCTCTGCCACAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp AAGCAGCGGTCTCCTGACCCATTCTTGATAACTGTGGCAGAGGGAAAGAGGCTCGCGGACAGCAAATGGTaGTCAAACTCCTTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: KQRSPDPFLITVAEGKRLADSKW*SNSFSR
Trigger: CCTGCTGAAGGAGTTTGACCACCATTTGCTGTCCGC...GAGCCTCTTTCCCTCTGCCACAGTTATCAAGAATGGGTCAGGAGACCGCTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000650871.1
CDS-3UTR CCA 90 bp TGGGGCTGTTTTCCATGTTGCTTTCCTTGCAGGACTTATGCCCAGAAGCAGCGGGCGGACAGCAAATGGTaGTCAAACTCCTTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: WGCFPCCFPCRTYAQKQRADSKW*SNSFSR
Trigger: CCTGCTGAAGGAGTTTGACCACCATTTGCTGTCCGC...CCGCTGCTTCTGGGCATAAGTCCTGCAAGGAAAGCAACATGGAAAACAGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000650871.1
CDS-3UTR CCA 90 bp AAGCAGCGGTCTCCTGACCCATTCTTGATAACTGTGGCAGAGGGAAAGAGGCTCGCAGCGGACAGCAAATaGTGGTCAAACTCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: KQRSPDPFLITVAEGKRLAADSK*WSNSFS
Trigger: GCTGAAGGAGTTTGACCACCATTTGCTGTCCGCTGC...GAGCCTCTTTCCCTCTGCCACAGTTATCAAGAATGGGTCAGGAGACCGCTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000650871.1
CDS-3UTR CCA 90 bp ACTGTGGCAGAGGGAAAGAGGCTCTGCAGGATCTTGTGCTGCCAATTAAATGCAGTCCCTGTCTCCCCATaGAGCCTTCTGTGCACTGTG +
Preference number: 4 (lower is better)
Translates to: TVAEGKRLCRILCCQLNAVPVSP*SLLCTV
Trigger: CACAGTGCACAGAAGGCTCCATGGGGAGACAGGGAC...TGCATTTAATTGGCAGCACAAGATCCTGCAGAGCCTCTTTCCCTCTGCCACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp GCAGAGGGAAAGAGGCTCTGCAGGATCTTGTGCTGCCAATTAAATGCAGGACTTGTCCCTGTCTCCCCATaGAGCCTTCTGTGCACTGTG +
Preference number: 4 (lower is better)
Translates to: AEGKRLCRILCCQLNAGLVPVSP*SLLCTV
Trigger: CACAGTGCACAGAAGGCTCCATGGGGAGACAGGGAC...AAGTCCTGCATTTAATTGGCAGCACAAGATCCTGCAGAGCCTCTTTCCCTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp AAGCAGCGGTCTCCTGACCCATTCTTGATAACTGTGGCAGAGGGAAAGAGGCTCCAAGCACTGGAAGTCTaGCTGCCACTCAGAGACTTG +
Preference number: 4 (lower is better)
Translates to: KQRSPDPFLITVAEGKRLQALEV*LPLRDL
Trigger: CAAGTCTCTGAGTGGCAGCCAGACTTCCAGTGCTTG...GAGCCTCTTTCCCTCTGCCACAGTTATCAAGAATGGGTCAGGAGACCGCTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CCA 90 bp AAGCAGCGGTCTCCTGACCCATTCTTGATAACTGTGGCAGAGGGAAAGAGGCTCAGTTGCTCCAAGCACTaGAAGTCTGGCTGCCACTCA +
Preference number: 4 (lower is better)
Translates to: KQRSPDPFLITVAEGKRLSCSKH*KSGCHS
Trigger: TGAGTGGCAGCCAGACTTCCAGTGCTTGGAGCAACT...GAGCCTCTTTCCCTCTGCCACAGTTATCAAGAATGGGTCAGGAGACCGCTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CCA 90 bp TGGGGCTGTTTTCCATGTTGCTTTCCTTGCAGGACTTATGCCCAGAAGCAGCGGAGTTGCTCCAAGCACTaGAAGTCTGGCTGCCACTCA +
Preference number: 4 (lower is better)
Translates to: WGCFPCCFPCRTYAQKQRSCSKH*KSGCHS
Trigger: TGAGTGGCAGCCAGACTTCCAGTGCTTGGAGCAACT...CCGCTGCTTCTGGGCATAAGTCCTGCAAGGAAAGCAACATGGAAAACAGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CCA 90 bp TGGGGCTGTTTTCCATGTTGCTTTCCTTGCAGGACTTATGCCCAGAAGCAGCGGCCTCAGACAAGGCAGTaGAACACTGAGTGTCCACCA +
Preference number: 4 (lower is better)
Translates to: WGCFPCCFPCRTYAQKQRPQTRQ*NTECPP
Trigger: TGGTGGACACTCAGTGTTCCACTGCCTTGTCTGAGG...CCGCTGCTTCTGGGCATAAGTCCTGCAAGGAAAGCAACATGGAAAACAGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CCA 90 bp TCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAGGCCAAGAAAATGCCTaGGGTATTATGAGGCGAGAA +
Preference number: 4 (lower is better)
Translates to: SSCKSLARTCVTALPKPQGQENA*GIMRRE
Trigger: TTCTCGCCTCATAATACCCCAGGCATTTTCTTGGCC...TTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp TTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACGGCCAAGAAAATGCCTaGGGTATTATGAGGCGAGAA +
Preference number: 4 (lower is better)
Translates to: LQIIGQNLCHGPAQAPKDGQENA*GIMRRE
Trigger: TTCTCGCCTCATAATACCCCAGGCATTTTCTTGGCC...GTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp CAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGACTGTGCCGTATAACGATATGAGGGTCTaGAGTGAGCAGAAGTATTTC +
Preference number: 4 (lower is better)
Translates to: QNLCHGPAQAPKDQTVPYNDMRV*SEQKYF
Trigger: GAAATACTTCTGCTCACTCCAGACCCTCATATCGTT...ATACGGCACAGTCTGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp CCCTGCTGGCACTCATTCTCTCTCCTGCTACCCTATGAAGAGGTGCCTTCTGCCGTGTGCCCATATTCTTaGGCCTACCAGAATCAGAAG +
Preference number: 4 (lower is better)
Translates to: PCWHSFSLLLPYEEVPSAVCPYS*AYQNQK
Trigger: CTTCTGATTCTGGTAGGCCCAAGAATATGGGCACAC...GGCAGAAGGCACCTCTTCATAGGGTAGCAGGAGAGAGAATGAGTGCCAGCAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CCA 90 bp CAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGAAGGCTTCTTCTTTTTaGACTGAAGGATGTGTGCCC +
Preference number: 4 (lower is better)
Translates to: QIIGQNLCHGPAQAPKDQKASSF*TEGCVP
Trigger: GGGCACACATCCTTCAGTCCAAAAAGAAGAAGCCTT...CTGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp GCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGGCCACCACTTTTTCTaGAGTCAGGATTTTGAACAG +
Preference number: 4 (lower is better)
Translates to: ANHWPEPVSRPCPSPKGPGHHFF*SQDFEQ
Trigger: CTGTTCAAAATCCTGACTCCAGAAAAAGTGGTGGCC...TGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp CAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGGGCCACCACTTTTTCTaGAGTCAGGATTTTGAACAG +
Preference number: 4 (lower is better)
Translates to: QIIGQNLCHGPAQAPKDQGHHFF*SQDFEQ
Trigger: CTGTTCAAAATCCTGACTCCAGAAAAAGTGGTGGCC...CTGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp ACTGTGGCAGAGGGAAAGAGGCTCTGCAGGATCTTGTGCTGCCAATTAAATGCAGCCCTGCTCTGCGACTaGGCCACCACTTTTTCTGGA +
Preference number: 4 (lower is better)
Translates to: TVAEGKRLCRILCCQLNAALLCD*ATTFSG
Trigger: TCCAGAAAAAGTGGTGGCCCAGTCGCAGAGCAGGGC...TGCATTTAATTGGCAGCACAAGATCCTGCAGAGCCTCTTTCCCTCTGCCACAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp TGTAGTCCGATGGCTCAGTCTCAGTCTCCACATCTTGATCCAAGGAGACTCGAACCTCCTCATCCACTGTaGAGGCATCAGGGTCGATGC +
Preference number: 4 (lower is better)
Translates to: CSPMAQSQSPHLDPRRLEPPHPL*RHQGRC
Trigger: GCATCGACCCTGATGCCTCCACAGTGGATGAGGAGG...TTCGAGTCTCCTTGGATCAAGATGTGGAGACTGAGACTGAGCCATCGGACTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509722.5
CDS-3UTR CCA 90 bp GGGAACATCCATGCTGTCGAGCAGTTGCCCCTCCTCATCCACTGTGGAGGCATCGATGAGCTGGAGTTCTaGCTGCAGTTTAGCATGTTT +
Preference number: 4 (lower is better)
Translates to: GNIHAVEQLPLLIHCGGIDELEF*LQFSMF
Trigger: AAACATGCTAAACTGCAGCCAGAACTCCAGCTCATC...GATGCCTCCACAGTGGATGAGGAGGGGCAACTGCTCGACAGCATGGATGTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509722.5
CDS-3UTR CCA 90 bp TCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAACACTGAGGATGAGCTaGAGTTCTGGCTGCAGTTTA +
Preference number: 4 (lower is better)
Translates to: SSCKSLARTCVTALPKPQTLRMS*SSGCSL
Trigger: TAAACTGCAGCCAGAACTCCAGCTCATCCTCAGTGT...TTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp TTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACACACTGAGGATGAGCTaGAGTTCTGGCTGCAGTTTA +
Preference number: 4 (lower is better)
Translates to: LQIIGQNLCHGPAQAPKDTLRMS*SSGCSL
Trigger: TAAACTGCAGCCAGAACTCCAGCTCATCCTCAGTGT...GTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
3UTR CAA 72 bp TCCTCCCAGCTTGCAGAGGAACTAAACCCTGATAAGTaGCTCCAAGCACTGGAAGTCTGGCTGCCACTCAGA +
Preference number: 4 (lower is better)
Translates to: SSQLAEELNPDK*LQALEVWLPLR
Trigger: TCTGAGTGGCAGCCAGACTTCCAGTGCTTGGAGCAACTTATCAGGGTTTAGTTCCTCTGCAAGCTGGGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509722.5
CDS-3UTR TCA 90 bp TTGTGTCCCCACCCAAATCTCATCTCGAATTGTAGTCCCATAATTCCCATGTGTGCGGCGTATAGGCACTaGAGGCAGCTGCCAGCTTGC +
Preference number: 4 (lower is better)
Translates to: LCPHPNLISNCSPIIPMCAAYRH*RQLPAC
Trigger: GCAAGCTGGCAGCTGCCTTCAGTGCCTATACGCCGC...ACACATGGGAATTATGGGACTACAATTCGAGATGAGATTTGGGTGGGGACACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR TCA 90 bp AAGCAGCGGTCTCCTGACCCATTCTTGATAACTGTGGCAGAGGGAAAGAGGCTCCATCATCTCTCTTGGTaGGGAGGCCAATCTCAAAGG +
Preference number: 4 (lower is better)
Translates to: KQRSPDPFLITVAEGKRLHHLSW*GGQSQR
Trigger: CCTTTGAGATTGGCCTCCTCACCAAGAGAGATGATG...GAGCCTCTTTCCCTCTGCCACAGTTATCAAGAATGGGTCAGGAGACCGCTGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000650871.1
CDS-3UTR TCA 90 bp AAGCAGCGGTCTCCTGACCCATTCTTGATAACTGTGGCAGAGGGAAAGAGGCTCGACCGAAAGCAGCTTTaGCAAAGCTGTGAAGCTCCT +
Preference number: 4 (lower is better)
Translates to: KQRSPDPFLITVAEGKRLDRKQL*QSCEAP
Trigger: AGGAGCTTCACAGCTTTGTCAAAGCTGCTTTCGGTC...GAGCCTCTTTCCCTCTGCCACAGTTATCAAGAATGGGTCAGGAGACCGCTGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000650871.1
CDS-3UTR TCA 90 bp CAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGCGAAGTATGGTGCTGTaGATAGGTGTCAAGGATTTT +
Preference number: 4 (lower is better)
Translates to: QIIGQNLCHGPAQAPKDQRSMVL*IGVKDF
Trigger: AAAATCCTTGACACCTATTCACAGCACCATACTTCG...CTGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR TCA 90 bp CAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGACTGTGCCGTATCAATGTGGCTTTTCTTaGGTAGTACTCACAGTATCT +
Preference number: 4 (lower is better)
Translates to: QNLCHGPAQAPKDQTVPYQCGFS*VVLTVS
Trigger: AGATACTGTGAGTACTACTCAAGAAAAGCCACATTG...ATACGGCACAGTCTGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR TCA 90 bp AAGCAGCGGTCTCCTGACCCATTCTTGATAACTGTGGCAGAGGGAAAGAGGCTCTCCTTCCTCCCCTTCTaGGTTCCCTCTGAACATTCT +
Preference number: 4 (lower is better)
Translates to: KQRSPDPFLITVAEGKRLSFLPF*VPSEHS
Trigger: AGAATGTTCAGAGGGAACTCAGAAGGGGAGGAAGGA...GAGCCTCTTTCCCTCTGCCACAGTTATCAAGAATGGGTCAGGAGACCGCTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000650871.1
CDS-3UTR TCA 90 bp AATTCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCACTCAGAGACTTGTTaGAAACAGCTCCCTCACCAT +
Preference number: 4 (lower is better)
Translates to: NSSCKSLARTCVTALPKPHSETC*KQLPHH
Trigger: ATGGTGAGGGAGCTGTTTTCAACAAGTCTCTGAGTG...GGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR TCA 90 bp TGGGGCTGTTTTCCATGTTGCTTTCCTTGCAGGACTTATGCCCAGAAGCAGCGGAAGGCAGTGGAACACTaGGTGTCCACCAGATGTTCT +
Preference number: 4 (lower is better)
Translates to: WGCFPCCFPCRTYAQKQRKAVEH*VSTRCS
Trigger: AGAACATCTGGTGGACACTCAGTGTTCCACTGCCTT...CCGCTGCTTCTGGGCATAAGTCCTGCAAGGAAAGCAACATGGAAAACAGCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000650871.1
CDS-3UTR TCA 90 bp TGGCATTTCCCCTGCTGGCACTCATTCTCTCTCCTGCTACCCTATGAAGAGGTGAGAAGCAGAACGATATaGGGGTCTGGAGTGAGCAGA +
Preference number: 4 (lower is better)
Translates to: WHFPCWHSFSLLLPYEEVRSRTI*GSGVSR
Trigger: TCTGCTCACTCCAGACCCTCATATCGTTCTGCTTCT...CACCTCTTCATAGGGTAGCAGGAGAGAGAATGAGTGCCAGCAGGGGAAATGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR TCA 90 bp TGGGGCTGTTTTCCATGTTGCTTTCCTTGCAGGACTTATGCCCAGAAGCAGCGGTTGTGCAGGACCCTGTaGAAGTCTAAGGGTGCATCT +
Preference number: 4 (lower is better)
Translates to: WGCFPCCFPCRTYAQKQRLCRTL*KSKGAS
Trigger: AGATGCACCCTTAGACTTTCACAGGGTCCTGCACAA...CCGCTGCTTCTGGGCATAAGTCCTGCAAGGAAAGCAACATGGAAAACAGCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000650871.1
CDS-3UTR TCA 90 bp CCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGTATTCTCTAGTCTCTaGAACAGCCAATCATGCCTC +
Preference number: 4 (lower is better)
Translates to: PLANHWPEPVSRPCPSPKVFSSL*NSQSCL
Trigger: GAGGCATGATTGGCTGTTTCAGAGACTAGAGAATAC...TTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR TCA 90 bp GCAGAGGGAAAGAGGCTCTGCAGGATCTTGTGCTGCCAATTAAATGCAGGACTTTGTGCTCGGTGGAGTTaGCTGGGCTTAAAAACCCCC +
Preference number: 4 (lower is better)
Translates to: AEGKRLCRILCCQLNAGLCARWS*LGLKTP
Trigger: GGGGGTTTTTAAGCCCAGTCAACTCCACCGAGCACA...AAGTCCTGCATTTAATTGGCAGCACAAGATCCTGCAGAGCCTCTTTCCCTCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR TCA 90 bp CAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGGCATGGTTTCTCCATTaGAGGTCTAGTCAAAGAAAG +
Preference number: 4 (lower is better)
Translates to: QIIGQNLCHGPAQAPKDQAWFLH*RSSQRK
Trigger: CTTTCTTTGACTAGACCTTCAATGGAGAAACCATGC...CTGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR TCA 90 bp GCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGCATGGTTTCTCCATTaGAGGTCTAGTCAAAGAAAG +
Preference number: 4 (lower is better)
Translates to: ANHWPEPVSRPCPSPKGPAWFLH*RSSQRK
Trigger: CTTTCTTTGACTAGACCTTCAATGGAGAAACCATGC...TGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR TCA 90 bp CAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGACTGTGCCGTATTCTCGTGAGAGTGAATaGATTCTCACAAGATCTGAT +
Preference number: 4 (lower is better)
Translates to: QNLCHGPAQAPKDQTVPYSRESE*ILTRSD
Trigger: ATCAGATCTTGTGAGAATTCATTCACTCTCACGAGA...ATACGGCACAGTCTGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR GCA 90 bp AATTCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCACTTGCTTGCACTCTTaGAGTAGCACAGCTACCACT +
Preference number: 4 (lower is better)
Translates to: NSSCKSLARTCVTALPKPTCLHS*SSTATT
Trigger: AGTGGTAGCTGTGCTACTGCAAGAGTGCAAGCAAGT...GGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp CAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGCCGTTGCTCCATTGTTaGTTATTAGACTGCTCAGAA +
Preference number: 4 (lower is better)
Translates to: QIIGQNLCHGPAQAPKDQPLLHC*LLDCSE
Trigger: TTCTGAGCAGTCTAATAAGCAACAATGGAGCAACGG...CTGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp AATTCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCTGTATACAGACCGACTaGACCAGGACCTTGTCACTT +
Preference number: 4 (lower is better)
Translates to: NSSCKSLARTCVTALPKPCIQTD*TRTLSL
Trigger: AAGTGACAAGGTCCTGGTGCAGTCGGTCTGTATACA...GGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp TCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAATCCGGCTGAGGAAGTaGCAAATATCCTACAATGGA +
Preference number: 4 (lower is better)
Translates to: SSCKSLARTCVTALPKPQIRLRK*QISYNG
Trigger: TCCATTGTAGGATATTTGGCACTTCCTCAGCCGGAT...TTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp TCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACAATAAACACGTaGCACGGATATTCACAGCTG +
Preference number: 4 (lower is better)
Translates to: SSCKSLARTCVTALPKPQRTINT*HGYSQL
Trigger: CAGCTGTGAATATCCGTGGCACGTGTTTATTGTCCT...TTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp ACTGTGGCAGAGGGAAAGAGGCTCTGCAGGATCTTGTGCTGCCAATTAAATGCAACAGAGCTGACTTGCTaGATGGACCGTCCCTGTCTC +
Preference number: 4 (lower is better)
Translates to: TVAEGKRLCRILCCQLNATELTC*MDRPCL
Trigger: GAGACAGGGACGGTCCATGCAGCAAGTCAGCTCTGT...TGCATTTAATTGGCAGCACAAGATCCTGCAGAGCCTCTTTCCCTCTGCCACAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp TCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAACAAGGAGACTCGAAATaGATCAGAATGGGTCCAGTT +
Preference number: 4 (lower is better)
Translates to: SSCKSLARTCVTALPKPQQGDSK*IRMGPV
Trigger: AACTGGACCCATTCTGATGCATTTCGAGTCTCCTTG...TTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp CCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAACAAGGAGACTCGAAATaGATCAGAATGGGTCCAGTT +
Preference number: 4 (lower is better)
Translates to: PLANHWPEPVSRPCPSPKQGDSK*IRMGPV
Trigger: AACTGGACCCATTCTGATGCATTTCGAGTCTCCTTG...TTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp TTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAAGGAGACTCGAAATaGATCAGAATGGGTCCAGTT +
Preference number: 4 (lower is better)
Translates to: LQIIGQNLCHGPAQAPKDQGDSK*IRMGPV
Trigger: AACTGGACCCATTCTGATGCATTTCGAGTCTCCTTG...GTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp TCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAATGTGAATGCAATGAATaGATAGCTCTGCCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: SSCKSLARTCVTALPKPQCECNE*IALPSL
Trigger: CAGGGAAGGCAGAGCTATGCATTCATTGCATTCACA...TTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp CCTGAGGTCTCCCCAGCCATGTGGAACTGTGAGTTAATTAAACCTCTTTTCTTTAGGCATCAGGGTCGATaGCCTGCTCTGCGACTGGGC +
Preference number: 4 (lower is better)
Translates to: PEVSPAMWNCELIKPLFFRHQGR*PALRLG
Trigger: GCCCAGTCGCAGAGCAGGGCATCGACCCTGATGCCT...AAAGAAAAGAGGTTTAATTAACTCACAGTTCCACATGGCTGGGGAGACCTCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR GCA 90 bp ACTGTGGCAGAGGGAAAGAGGCTCTGCAGGATCTTGTGCTGCCAATTAAATGCAATGCTGTCGAGCAGTTaGCCCTCCTCATCCACTGTG +
Preference number: 4 (lower is better)
Translates to: TVAEGKRLCRILCCQLNAMLSSS*PSSSTV
Trigger: CACAGTGGATGAGGAGGGGCAACTGCTCGACAGCAT...TGCATTTAATTGGCAGCACAAGATCCTGCAGAGCCTCTTTCCCTCTGCCACAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp ACTGTGGCAGAGGGAAAGAGGCTCTGCAGGATCTTGTGCTGCCAATTAAATGCATGCAGGGAACATCCATaGTGTCGAGCAGTTGCCCCT +
Preference number: 4 (lower is better)
Translates to: TVAEGKRLCRILCCQLNACREHP*CRAVAP
Trigger: AGGGGCAACTGCTCGACAGCATGGATGTTCCCTGCA...TGCATTTAATTGGCAGCACAAGATCCTGCAGAGCCTCTTTCCCTCTGCCACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp TGGCTTTATAAGCATCTGGCATTTCCCCTGCTGGCACTCATTCTCTCTCCTGCTTGCAGGGAACATCCATaGTGTCGAGCAGTTGCCCCT +
Preference number: 4 (lower is better)
Translates to: WLYKHLAFPLLALILSPACREHP*CRAVAP
Trigger: AGGGGCAACTGCTCGACAGCATGGATGTTCCCTGCA...AGCAGGAGAGAGAATGAGTGCCAGCAGGGGAAATGCCAGATGCTTATAAAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR GCA 90 bp AAGCAGCGGTCTCCTGACCCATTCTTGATAACTGTGGCAGAGGGAAAGAGGCTCTCAAAGTCATCAGGTTaGAAGGTGCGAGCCTCAAGG +
Preference number: 4 (lower is better)
Translates to: KQRSPDPFLITVAEGKRLSKSSG*KVRASR
Trigger: CCTTGAGGCTCGCACCTTGCAACCTGATGACTTTGA...GAGCCTCTTTCCCTCTGCCACAGTTATCAAGAATGGGTCAGGAGACCGCTGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000650871.1
CDS-3UTR GCA 90 bp TGGCATTTCCCCTGCTGGCACTCATTCTCTCTCCTGCTACCCTATGAAGAGGTGCAAAAGAGCACTATGTaGTCGGTGGAGTTGACTGGG +
Preference number: 4 (lower is better)
Translates to: WHFPCWHSFSLLLPYEEVQKSTM*SVELTG
Trigger: CCCAGTCAACTCCACCGAGCACATAGTGCTCTTTTG...CACCTCTTCATAGGGTAGCAGGAGAGAGAATGAGTGCCAGCAGGGGAAATGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR GCA 90 bp GCAGAGGGAAAGAGGCTCTGCAGGATCTTGTGCTGCCAATTAAATGCAGGACTTACATCAGTGAAGTGGTaGCAGAGCCCCTTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: AEGKRLCRILCCQLNAGLTSVKW*QSPFCS
Trigger: GGAGCAGAAGGGGCTCTGGCACCACTTCACTGATGT...AAGTCCTGCATTTAATTGGCAGCACAAGATCCTGCAGAGCCTCTTTCCCTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp GCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGGCTGTTTTCCATGTTaGTTTCCTTGCAGGACTTAT +
Preference number: 4 (lower is better)
Translates to: ANHWPEPVSRPCPSPKGPGCFPC*FPCRTY
Trigger: ATAAGTCCTGCAAGGAAAGCAACATGGAAAACAGCC...TGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000650871.1
CDS-3UTR GCA 90 bp TTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACTGCCTTTCTCAAGAGTaGTTTTCATCCCTCATGGGT +
Preference number: 4 (lower is better)
Translates to: LQIIGQNLCHGPAQAPKDCLSQE*FSSLMG
Trigger: ACCCATGAGGGATGAAAAGCACTCTTGAGAAAGGCA...GTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000650871.1
CDS-3UTR GCA 90 bp CCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAATGCCTTTCTCAAGAGTaGTTTTCATCCCTCATGGGT +
Preference number: 4 (lower is better)
Translates to: PLANHWPEPVSRPCPSPKCLSQE*FSSLMG
Trigger: ACCCATGAGGGATGAAAAGCACTCTTGAGAAAGGCA...TTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000650871.1
CDS-3UTR GCA 90 bp CCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAACATGGGGGTTTGTTGTaGGAATTACTTCATCACCCA +
Preference number: 4 (lower is better)
Translates to: PLANHWPEPVSRPCPSPKHGGLL*ELLHHP
Trigger: TGGGTGATGAAGTAATTCGCACAACAAACCCCCATG...TTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CCA 90 bp CATTTCTGTACAGCCAGGTACCCGTTGCTCCATTGTTGCTTATTAGACTGCTCACACCTGCGGGGCAATTaGCGTGGCTGGCTGCAACTT +
Preference number: 4 (lower is better)
Translates to: HFCTARYPLLHCCLLDCSHLRGN*RGWLQL
Trigger: AAGTTGCAGCCAGCCACGCCAATTGCCCCGCAGGTG...TGAGCAGTCTAATAAGCAACAATGGAGCAACGGGTACCTGGCTGTACAGAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515330.5
CDS-3UTR CCA 90 bp TGGCATTTCCCCTGCTGGCACTCATTCTCTCTCCTGCTACCCTATGAAGAGGTGGTATACCTAGCGACGTaGAGAGGCCCTTTTTATCCG +
Preference number: 4 (lower is better)
Translates to: WHFPCWHSFSLLLPYEEVVYLAT*RGPFYP
Trigger: CGGATAAAAAGGGCCTCTCCACGTCGCTAGGTATAC...CACCTCTTCATAGGGTAGCAGGAGAGAGAATGAGTGCCAGCAGGGGAAATGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CCA 90 bp CAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGACTGTGCCGTATAAATGTTCCTTCACCTaGGCAATCACAGACATAACT +
Preference number: 4 (lower is better)
Translates to: QNLCHGPAQAPKDQTVPYKCSFT*AITDIT
Trigger: AGTTATGTCTGTGATTGCCCAGGTGAAGGAACATTT...ATACGGCACAGTCTGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp GCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAATATTTCTGACTTCCTaGATACCTTCTGGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: ANHWPEPVSRPCPSPKGPIFLTS*IPSGAP
Trigger: AGGAGCTCCAGAAGGTATCCAGGAAGTCAGAAATAT...TGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp CAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGAACGATATGAGGGTCTaGAGTGAGCAGAAGTATTTC +
Preference number: 4 (lower is better)
Translates to: QIIGQNLCHGPAQAPKDQNDMRV*SEQKYF
Trigger: GAAATACTTCTGCTCACTCCAGACCCTCATATCGTT...CTGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp CAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGAGCTACATGGCAGCATaGAAATGTTTCCCAGAGAAT +
Preference number: 4 (lower is better)
Translates to: QIIGQNLCHGPAQAPKDQSYMAA*KCFPEN
Trigger: ATTCTCTGGGAAACATTTCCATGCTGCCATGTAGCT...CTGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp TCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAGGCCACCACTTTTTCTaGAGTCAGGATTTTGAACAG +
Preference number: 4 (lower is better)
Translates to: SSCKSLARTCVTALPKPQGHHFF*SQDFEQ
Trigger: CTGTTCAAAATCCTGACTCCAGAAAAAGTGGTGGCC...TTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp TTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACGATGAGCTGGAGTTCTaGCTGCAGTTTAGCATGTTT +
Preference number: 4 (lower is better)
Translates to: LQIIGQNLCHGPAQAPKDDELEF*LQFSMF
Trigger: AAACATGCTAAACTGCAGCCAGAACTCCAGCTCATC...GTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp CCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGATGAGCTGGAGTTCTaGCTGCAGTTTAGCATGTTT +
Preference number: 4 (lower is better)
Translates to: PLANHWPEPVSRPCPSPKDELEF*LQFSMF
Trigger: AAACATGCTAAACTGCAGCCAGAACTCCAGCTCATC...TTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp AATTCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCCCAAGAACTCCCACTaGAATTCAGATAGGACCAAG +
Preference number: 4 (lower is better)
Translates to: NSSCKSLARTCVTALPKPPKNSH*NSDRTK
Trigger: CTTGGTCCTATCTGAATTCCAGTGGGAGTTCTTGGG...GGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGAATT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp TGGGGCTGTTTTCCATGTTGCTTTCCTTGCAGGACTTATGCCCAGAAGCAGCGGCCTCTTGCAAATCATTaGCCAGAACCTGTGTCACGG +
Preference number: 4 (lower is better)
Translates to: WGCFPCCFPCRTYAQKQRPLANH*PEPVSR
Trigger: CCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGG...CCGCTGCTTCTGGGCATAAGTCCTGCAAGGAAAGCAACATGGAAAACAGCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000650871.1
CDS-3UTR CCA 90 bp TGGGGCTGTTTTCCATGTTGCTTTCCTTGCAGGACTTATGCCCAGAAGCAGCGGGGCTTTATAAGCATCTaGCATTTCCCCTGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: WGCFPCCFPCRTYAQKQRGFISI*HFPCWH
Trigger: GTGCCAGCAGGGGAAATGCCAGATGCTTATAAAGCC...CCGCTGCTTCTGGGCATAAGTCCTGCAAGGAAAGCAACATGGAAAACAGCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR TCA 90 bp CAAGGATCTCTTTCCTCATCTTTCCCGGCAATGAAACCCAAGAACTCCCACTGGGGATATTCACAGCTGTaGGCACGAAGAGCGGCGTAT +
Preference number: 4 (lower is better)
Translates to: QGSLSSSFPAMKPKNSHWGYSQL*ARRAAY
Trigger: ATACGCCGCTCTTCGTGCTCACAGCTGTGAATATCC...CCAGTGGGAGTTCTTGGGTTTCATTGCCGGGAAAGATGAGGAAAGAGATCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509722.5
CDS-3UTR TCA 90 bp TTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCGAAGTATGGTGCTGTaGATAGGTGTCAAGGATTTT +
Preference number: 4 (lower is better)
Translates to: LQIIGQNLCHGPAQAPKDRSMVL*IGVKDF
Trigger: AAAATCCTTGACACCTATTCACAGCACCATACTTCG...GTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR TCA 90 bp TTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCTGTTTTTAGAGCAGTaGTGCAGACTCCTGTTTTTG +
Preference number: 4 (lower is better)
Translates to: LQIIGQNLCHGPAQAPKDLFLEQ*CRLLFL
Trigger: CAAAAACAGGAGTCTGCATCACTGCTCTAAAAACAG...GTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR TCA 90 bp CCTCTGACCAGGCGGCTGTCTCAGAATGCACAGTCTATGAGAGCCGTGCCCATTCTGTTTTTAGAGCAGTaGTGCAGACTCCTGTTTTTG +
Preference number: 4 (lower is better)
Translates to: PLTRRLSQNAQSMRAVPILFLEQ*CRLLFL
Trigger: CAAAAACAGGAGTCTGCATCACTGCTCTAAAAACAG...AATGGGCACGGCTCTCATAGACTGTGCATTCTGAGACAGCCGCCTGGTCAGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000509722.5
CDS-3UTR TCA 90 bp CAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGCAATGTGGCTTTTCTTaGGTAGTACTCACAGTATCT +
Preference number: 4 (lower is better)
Translates to: QIIGQNLCHGPAQAPKDQQCGFS*VVLTVS
Trigger: AGATACTGTGAGTACTACTCAAGAAAAGCCACATTG...CTGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR TCA 90 bp GCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCACAATGTGGCTTTTCTTaGGTAGTACTCACAGTATCT +
Preference number: 4 (lower is better)
Translates to: ANHWPEPVSRPCPSPKGPQCGFS*VVLTVS
Trigger: AGATACTGTGAGTACTACTCAAGAAAAGCCACATTG...TGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR TCA 90 bp CTTCACAGTCAAGTAGTCCCCCAAATAGACAATAGTTTCCTGGGCCGTCCACAGATGCCTGGGGTATTATaGGGCGAGAAGGGTGTCAAG +
Preference number: 4 (lower is better)
Translates to: LHSQVVPQIDNSFLGRPQMPGVL*GEKGVK
Trigger: CTTGACACCCTTCTCGCCTCATAATACCCCAGGCAT...CTGTGGACGGCCCAGGAAACTATTGTCTATTTGGGGGACTACTTGACTGTGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509722.5
CDS-3UTR TCA 90 bp GCAGAGGGAAAGAGGCTCTGCAGGATCTTGTGCTGCCAATTAAATGCAGGACTTATGCCTGGGGTATTATaGGGCGAGAAGGGTGTCAAG +
Preference number: 4 (lower is better)
Translates to: AEGKRLCRILCCQLNAGLMPGVL*GEKGVK
Trigger: CTTGACACCCTTCTCGCCTCATAATACCCCAGGCAT...AAGTCCTGCATTTAATTGGCAGCACAAGATCCTGCAGAGCCTCTTTCCCTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR TCA 90 bp GCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCATTCTTCTTTTTGGACTaGAGGATGTGTGCCCATATT +
Preference number: 4 (lower is better)
Translates to: ANHWPEPVSRPCPSPKGPFFFLD*RMCAHI
Trigger: AATATGGGCACACATCCTTCAGTCCAAAAAGAAGAA...TGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR TCA 90 bp TCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAATGTAAGGCTCCACACTaGTACATCCCTTTATTGTCT +
Preference number: 4 (lower is better)
Translates to: SSCKSLARTCVTALPKPQCKAPH*YIPLLS
Trigger: AGACAATAAAGGGATGTATCAGTGTGGAGCCTTACA...TTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR TCA 90 bp CCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAATGTAAGGCTCCACACTaGTACATCCCTTTATTGTCT +
Preference number: 4 (lower is better)
Translates to: PLANHWPEPVSRPCPSPKCKAPH*YIPLLS
Trigger: AGACAATAAAGGGATGTATCAGTGTGGAGCCTTACA...TTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR TCA 90 bp CAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGACTGTGCCGTATGACAGGAAAACAAATTaGATTCGTATCACAAAGGCT +
Preference number: 4 (lower is better)
Translates to: QNLCHGPAQAPKDQTVPYDRKTN*IRITKA
Trigger: AGCCTTTGTGATACGAATTCAATTTGTTTTCCTGTC...ATACGGCACAGTCTGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000650871.1
CDS-3UTR TCA 90 bp TGGCTTTATAAGCATCTGGCATTTCCCCTGCTGGCACTCATTCTCTCTCCTGCTTCTCCTGCTACCCTATaGAGAGGTGCCTTCTGCCAT +
Preference number: 4 (lower is better)
Translates to: WLYKHLAFPLLALILSPASPATL*RGAFCH
Trigger: ATGGCAGAAGGCACCTCTTCATAGGGTAGCAGGAGA...AGCAGGAGAGAGAATGAGTGCCAGCAGGGGAAATGCCAGATGCTTATAAAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR GCA 90 bp AAGCAGCGGTCTCCTGACCCATTCTTGATAACTGTGGCAGAGGGAAAGAGGCTCACGGCTTGTTTGTACTaGCACTTTTCAGGCACGAAG +
Preference number: 4 (lower is better)
Translates to: KQRSPDPFLITVAEGKRLTACLY*HFSGTK
Trigger: CTTCGTGCCTGAAAAGTGGCAGTACAAACAAGCCGT...GAGCCTCTTTCCCTCTGCCACAGTTATCAAGAATGGGTCAGGAGACCGCTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000505127.5
ENST00000650871.1
CDS-3UTR GCA 90 bp TGGCTTTATAAGCATCTGGCATTTCCCCTGCTGGCACTCATTCTCTCTCCTGCTATTGGCGTGGCTGGCTaGAACTTGTGGAGACCTTTG +
Preference number: 4 (lower is better)
Translates to: WLYKHLAFPLLALILSPAIGVAG*NLWRPL
Trigger: CAAAGGTCTCCACAAGTTGCAGCCAGCCACGCCAAT...AGCAGGAGAGAGAATGAGTGCCAGCAGGGGAAATGCCAGATGCTTATAAAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR GCA 90 bp GAAGTGGTGCCAGAGCCCCTTCTGCTCCTTATAGTCTTTCCCAACATACCTCCCTGTATACAGACCGACTaGACCAGGACCTTGTCACTT +
Preference number: 4 (lower is better)
Translates to: EVVPEPLLLLIVFPNIPPCIQTD*TRTLSL
Trigger: AAGTGACAAGGTCCTGGTGCAGTCGGTCTGTATACA...GGGAGGTATGTTGGGAAAGACTATAAGGAGCAGAAGGGGCTCTGGCACCACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505127.5
ENST00000509722.5
CDS-3UTR GCA 90 bp CAGCTTGCAGGCTTCTGCAGCGGACAGCAAATGGTGGTCAAACTCCTTCAGCAGATCCGGCTGAGGAAGTaGCAAATATCCTACAATGGA +
Preference number: 4 (lower is better)
Translates to: QLAGFCSGQQMVVKLLQQIRLRK*QISYNG
Trigger: TCCATTGTAGGATATTTGGCACTTCCTCAGCCGGAT...CTGCTGAAGGAGTTTGACCACCATTTGCTGTCCGCTGCAGAAGCCTGCAAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509722.5
CDS-3UTR GCA 90 bp TGGGGCTGTTTTCCATGTTGCTTTCCTTGCAGGACTTATGCCCAGAAGCAGCGGGTACAGCTTCCCCATTaGTTCCTTACAGAGCTGACT +
Preference number: 4 (lower is better)
Translates to: WGCFPCCFPCRTYAQKQRVQLPH*FLTELT
Trigger: AGTCAGCTCTGTAAGGAAGCAATGGGGAAGCTGTAC...CCGCTGCTTCTGGGCATAAGTCCTGCAAGGAAAGCAACATGGAAAACAGCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000650871.1
CDS-3UTR GCA 90 bp GCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAAAATCCCCTTGCCCATaGAAGATAAGTTTATCCAAC +
Preference number: 4 (lower is better)
Translates to: ANHWPEPVSRPCPSPKGPKSPCP*KISLSN
Trigger: GTTGGATAAACTTATCTTGCATGGGCAAGGGGATTT...TGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp CAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGACTGTGCCGTATTTTTGGAAATCCCCTTaGCCATGCAAGATAAGTTTA +
Preference number: 4 (lower is better)
Translates to: QNLCHGPAQAPKDQTVPYFWKSP*PCKISL
Trigger: TAAACTTATCTTGCATGGGCAAGGGGATTTCCAAAA...ATACGGCACAGTCTGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp GATACTGATCAATTCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTCCCTGCTCTTTCCCCTaGCTGTCTTTGACATCGCAG +
Preference number: 4 (lower is better)
Translates to: DTDQFLLQIIGQNLCHGPPCSFP*LSLTSQ
Trigger: CTGCGATGTCAAAGACAGGCAGGGGAAAGAGCAGGG...AGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAGTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp GCAGGACTTAAAGTGATACTGATCAATTCCTCTTGCAAATCATTGGCCAGAACCAGGCATCAGGGTCGATaGCCTGCTCTGCGACTGGGC +
Preference number: 4 (lower is better)
Translates to: AGLKVILINSSCKSLARTRHQGR*PALRLG
Trigger: GCCCAGTCGCAGAGCAGGGCATCGACCCTGATGCCT...GGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAGTATCACTTTAAGTCCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp GATACTGATCAATTCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTTGCAGGGAACATCCATaGTGTCGAGCAGTTGCCCCT +
Preference number: 4 (lower is better)
Translates to: DTDQFLLQIIGQNLCHGPCREHP*CRAVAP
Trigger: AGGGGCAACTGCTCGACAGCATGGATGTTCCCTGCA...AGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAGTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp GCAGAGGGAAAGAGGCTCTGCAGGATCTTGTGCTGCCAATTAAATGCAGGACTTAGCCGTGCCCATTTGTaGAGGGAACATCCATGCTGT +
Preference number: 4 (lower is better)
Translates to: AEGKRLCRILCCQLNAGLSRAHL*REHPCC
Trigger: ACAGCATGGATGTTCCCTGCACAAATGGGCACGGCT...AAGTCCTGCATTTAATTGGCAGCACAAGATCCTGCAGAGCCTCTTTCCCTCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp GATACTGATCAATTCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTACATCAGTGAAGTGGTaGCAGAGCCCCTTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: DTDQFLLQIIGQNLCHGPTSVKW*QSPFCS
Trigger: GGAGCAGAAGGGGCTCTGGCACCACTTCACTGATGT...AGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAGTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp CCCTGCTGGCACTCATTCTCTCTCCTGCTACCCTATGAAGAGGTGCCTTCTGCCCTGATCAATTCCTCTTaGAAATCATTGGCCAGAACC +
Preference number: 4 (lower is better)
Translates to: PCWHSFSLLLPYEEVPSALINSS*KSLART
Trigger: GGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAG...GGCAGAAGGCACCTCTTCATAGGGTAGCAGGAGAGAGAATGAGTGCCAGCAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR GCA 90 bp CCCTGCTGGCACTCATTCTCTCTCCTGCTACCCTATGAAGAGGTGCCTTCTGCCTGCAGGATCTTGTGCTaGCAATTAAATGCAGGACTT +
Preference number: 4 (lower is better)
Translates to: PCWHSFSLLLPYEEVPSACRILC*QLNAGL
Trigger: AAGTCCTGCATTTAATTGGCAGCACAAGATCCTGCA...GGCAGAAGGCACCTCTTCATAGGGTAGCAGGAGAGAGAATGAGTGCCAGCAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR GCA 90 bp TTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACGGCTGTTTTCCATGTTaGTTTCCTTGCAGGACTTAT +
Preference number: 4 (lower is better)
Translates to: LQIIGQNLCHGPAQAPKDGCFPC*FPCRTY
Trigger: ATAAGTCCTGCAAGGAAAGCAACATGGAAAACAGCC...GTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000650871.1
CDS-3UTR GCA 90 bp CCCACTGTCCACCCTCTGATAAGCCCTGGTGTGTGTTGTTCCCTCTATGTGTCCCATGGGGGTTTGTTGTaGGAATTACTTCATCACCCA +
Preference number: 4 (lower is better)
Translates to: PTVHPLISPGVCCSLYVSHGGLL*ELLHHP
Trigger: TGGGTGATGAAGTAATTCGCACAACAAACCCCCATG...GGACACATAGAGGGAACAACACACACCAGGGCTTATCAGAGGGTGGACAGTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CCA 90 bp TGGGGCTGTTTTCCATGTTGCTTTCCTTGCAGGACTTATGCCCAGAAGCAGCGGATGATTACGATGAATTaGGTGTCCCTGGGTCTAGGG +
Preference number: 4 (lower is better)
Translates to: WGCFPCCFPCRTYAQKQRMITMN*VSLGLG
Trigger: CCCTAGACCCAGGGACACCCAATTCATCGTAATCAT...CCGCTGCTTCTGGGCATAAGTCCTGCAAGGAAAGCAACATGGAAAACAGCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000650871.1
CDS-3UTR CCA 90 bp ACTGTGGCAGAGGGAAAGAGGCTCTGCAGGATCTTGTGCTGCCAATTAAATGCACTCTTCCGACACATCTaGCGCTTCCAACAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: TVAEGKRLCRILCCQLNALFRHI*RFQQEL
Trigger: CAGCTCTTGTTGGAAGCGCCAGATGTGTCGGAAGAG...TGCATTTAATTGGCAGCACAAGATCCTGCAGAGCCTCTTTCCCTCTGCCACAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp AAGCAGCGGTCTCCTGACCCATTCTTGATAACTGTGGCAGAGGGAAAGAGGCTCACTTGTGGAGACCTTTaGCGACCTGCAGAAGTTTTC +
Preference number: 4 (lower is better)
Translates to: KQRSPDPFLITVAEGKRLTCGDL*RPAEVF
Trigger: GAAAACTTCTGCAGGTCGCCAAAGGTCTCCACAAGT...GAGCCTCTTTCCCTCTGCCACAGTTATCAAGAATGGGTCAGGAGACCGCTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000650871.1
CDS-3UTR CCA 90 bp CATTTCTGTACAGCCAGGTACCCGTTGCTCCATTGTTGCTTATTAGACTGCTCAGGCAATTGGCGTGGCTaGCTGCAACTTGTGGAGACC +
Preference number: 4 (lower is better)
Translates to: HFCTARYPLLHCCLLDCSGNWRG*LQLVET
Trigger: GGTCTCCACAAGTTGCAGCCAGCCACGCCAATTGCC...TGAGCAGTCTAATAAGCAACAATGGAGCAACGGGTACCTGGCTGTACAGAAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515330.5
CDS-3UTR CCA 90 bp TTGTGTCCCCACCCAAATCTCATCTCGAATTGTAGTCCCATAATTCCCATGTGTGCGGGGCAATTGGCGTaGCTGGCTGCAACTTGTGGA +
Preference number: 4 (lower is better)
Translates to: LCPHPNLISNCSPIIPMCAGQLA*LAATCG
Trigger: TCCACAAGTTGCAGCCAGCCACGCCAATTGCCCCGC...ACACATGGGAATTATGGGACTACAATTCGAGATGAGATTTGGGTGGGGACACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CCA 90 bp CATTTCTGTACAGCCAGGTACCCGTTGCTCCATTGTTGCTTATTAGACTGCTCAACGGAGATTCGGGCTTaGCGAATAACCACCTGCGGG +
Preference number: 4 (lower is better)
Translates to: HFCTARYPLLHCCLLDCSTEIRA*RITTCG
Trigger: CCCGCAGGTGGTTATTCGCCAAGCCCGAATCTCCGT...TGAGCAGTCTAATAAGCAACAATGGAGCAACGGGTACCTGGCTGTACAGAAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515330.5
CDS-3UTR CCA 90 bp GCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCACCAAATATCCTACAATaGAGGCCCATATTAACTCTG +
Preference number: 4 (lower is better)
Translates to: ANHWPEPVSRPCPSPKGPPNILQ*RPILTL
Trigger: CAGAGTTAATATGGGCCTCCATTGTAGGATATTTGG...TGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp GCTTACAGAGGAATTGGGGGTCTCCGCCCTCTGACCAGGCGGCTGTCTCAGAATCCAAATATCCTACAATaGAGGCCCATATTAACTCTG +
Preference number: 4 (lower is better)
Translates to: AYRGIGGLRPLTRRLSQNPNILQ*RPILTL
Trigger: CAGAGTTAATATGGGCCTCCATTGTAGGATATTTGG...ATTCTGAGACAGCCGCCTGGTCAGAGGGCGGAGACCCCCAATTCCTCTGTAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509722.5
CDS-3UTR CCA 90 bp TGCGGTCATCTGTCGCTCCACATCAGTGAAGTGGTGCCAGAGCCCCTTCTGCTCAATCGTTCTTGCTCATaGAAACAAAGATGTCTGCCA +
Preference number: 4 (lower is better)
Translates to: CGHLSLHISEVVPEPLLLNRSCS*KQRCLP
Trigger: TGGCAGACATCTTTGTTTCCATGAGCAAGAACGATT...GAGCAGAAGGGGCTCTGGCACCACTTCACTGATGTGGAGCGACAGATGACCGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505127.5
ENST00000509722.5
CDS-3UTR CCA 90 bp CAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGACTGTGCCGTATGTCTCTTTGACAATGTaGCTTTTCTTGAGTAGTACT +
Preference number: 4 (lower is better)
Translates to: QNLCHGPAQAPKDQTVPYVSLTM*LFLSST
Trigger: AGTACTACTCAAGAAAAGCCACATTGTCAAAGAGAC...ATACGGCACAGTCTGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp GCAGAGGGAAAGAGGCTCTGCAGGATCTTGTGCTGCCAATTAAATGCAGGACTTCAAGCACTGGAAGTCTaGCTGCCACTCAGAGACTTG +
Preference number: 4 (lower is better)
Translates to: AEGKRLCRILCCQLNAGLQALEV*LPLRDL
Trigger: CAAGTCTCTGAGTGGCAGCCAGACTTCCAGTGCTTG...AAGTCCTGCATTTAATTGGCAGCACAAGATCCTGCAGAGCCTCTTTCCCTCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp TGGGGCTGTTTTCCATGTTGCTTTCCTTGCAGGACTTATGCCCAGAAGCAGCGGGGCCAAGAAAATGCCTaGGGTATTATGAGGCGAGAA +
Preference number: 4 (lower is better)
Translates to: WGCFPCCFPCRTYAQKQRGQENA*GIMRRE
Trigger: TTCTCGCCTCATAATACCCCAGGCATTTTCTTGGCC...CCGCTGCTTCTGGGCATAAGTCCTGCAAGGAAAGCAACATGGAAAACAGCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CCA 90 bp TGGGGCTGTTTTCCATGTTGCTTTCCTTGCAGGACTTATGCCCAGAAGCAGCGGGTGTGCCCATATTCTTaGGCCTACCAGAATCAGAAG +
Preference number: 4 (lower is better)
Translates to: WGCFPCCFPCRTYAQKQRVCPYS*AYQNQK
Trigger: CTTCTGATTCTGGTAGGCCCAAGAATATGGGCACAC...CCGCTGCTTCTGGGCATAAGTCCTGCAAGGAAAGCAACATGGAAAACAGCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CCA 90 bp AATTCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCAAGGCTTCTTCTTTTTaGACTGAAGGATGTGTGCCC +
Preference number: 4 (lower is better)
Translates to: NSSCKSLARTCVTALPKPKASSF*TEGCVP
Trigger: GGGCACACATCCTTCAGTCCAAAAAGAAGAAGCCTT...GGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGAATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp TCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGCTACATGGCAGCATaGAAATGTTTCCCAGAGAAT +
Preference number: 4 (lower is better)
Translates to: SSCKSLARTCVTALPKPQSYMAA*KCFPEN
Trigger: ATTCTCTGGGAAACATTTCCATGCTGCCATGTAGCT...TTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp TGGGGCTGTTTTCCATGTTGCTTTCCTTGCAGGACTTATGCCCAGAAGCAGCGGGGTGAAGGAGCTACATaGCAGCATGGAAATGTTTCC +
Preference number: 4 (lower is better)
Translates to: WGCFPCCFPCRTYAQKQRGEGAT*QHGNVS
Trigger: GGAAACATTTCCATGCTGCCATGTAGCTCCTTCACC...CCGCTGCTTCTGGGCATAAGTCCTGCAAGGAAAGCAACATGGAAAACAGCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CCA 90 bp TGGCATTTCCCCTGCTGGCACTCATTCTCTCTCCTGCTACCCTATGAAGAGGTGGGTGAAGGAGCTACATaGCAGCATGGAAATGTTTCC +
Preference number: 4 (lower is better)
Translates to: WHFPCWHSFSLLLPYEEVGEGAT*QHGNVS
Trigger: GGAAACATTTCCATGCTGCCATGTAGCTCCTTCACC...CACCTCTTCATAGGGTAGCAGGAGAGAGAATGAGTGCCAGCAGGGGAAATGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CCA 90 bp CAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGACTGTGCCGTATGTCAAAGAAAGACGATaGCAGATTTCATTACATTCC +
Preference number: 4 (lower is better)
Translates to: QNLCHGPAQAPKDQTVPYVKERR*QISLHS
Trigger: GGAATGTAATGAAATCTGCCATCGTCTTTCTTTGAC...ATACGGCACAGTCTGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp CCCTGCTGGCACTCATTCTCTCTCCTGCTACCCTATGAAGAGGTGCCTTCTGCCGGTTACATTGTGATATaGTTTGGCTTTGTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: PCWHSFSLLLPYEEVPSAGYIVI*FGFVSP
Trigger: TGGGGACACAAAGCCAAACCATATCACAATGTAACC...GGCAGAAGGCACCTCTTCATAGGGTAGCAGGAGAGAGAATGAGTGCCAGCAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR TCA 90 bp GATACTGATCAATTCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGGATATTCACAGCTGTaGGCACGAAGAGCGGCGTAT +
Preference number: 4 (lower is better)
Translates to: DTDQFLLQIIGQNLCHGPGYSQL*ARRAAY
Trigger: ATACGCCGCTCTTCGTGCTCACAGCTGTGAATATCC...AGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAGTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR TCA 90 bp TGGGGCTGTTTTCCATGTTGCTTTCCTTGCAGGACTTATGCCCAGAAGCAGCGGGCTTTGACAAAGCTGTaGAGCTCCTGTTTTCCAGTA +
Preference number: 4 (lower is better)
Translates to: WGCFPCCFPCRTYAQKQRALTKL*SSCFPV
Trigger: TACTGGAAAACAGGAGCTTCACAGCTTTGTCAAAGC...CCGCTGCTTCTGGGCATAAGTCCTGCAAGGAAAGCAACATGGAAAACAGCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000650871.1
CDS-3UTR TCA 90 bp ACTGTGGCAGAGGGAAAGAGGCTCTGCAGGATCTTGTGCTGCCAATTAAATGCAGACCGAAAGCAGCTTTaGCAAAGCTGTGAAGCTCCT +
Preference number: 4 (lower is better)
Translates to: TVAEGKRLCRILCCQLNADRKQL*QSCEAP
Trigger: AGGAGCTTCACAGCTTTGTCAAAGCTGCTTTCGGTC...TGCATTTAATTGGCAGCACAAGATCCTGCAGAGCCTCTTTCCCTCTGCCACAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR TCA 90 bp TGGCATTTCCCCTGCTGGCACTCATTCTCTCTCCTGCTACCCTATGAAGAGGTGACAGACATAACTTCTTaGGACAGAGCTTCTCTGTCC +
Preference number: 4 (lower is better)
Translates to: WHFPCWHSFSLLLPYEEVTDITS*DRASLS
Trigger: GGACAGAGAAGCTCTGTCTCAAGAAGTTATGTCTGT...CACCTCTTCATAGGGTAGCAGGAGAGAGAATGAGTGCCAGCAGGGGAAATGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR TCA 90 bp AAGCAGCGGTCTCCTGACCCATTCTTGATAACTGTGGCAGAGGGAAAGAGGCTCCTTCTGAGTTCCCTCTaGACATTCTTACCCATTAGG +
Preference number: 4 (lower is better)
Translates to: KQRSPDPFLITVAEGKRLLLSSL*TFLPIR
Trigger: CCTAATGGGTAAGAATGTTCAGAGGGAACTCAGAAG...GAGCCTCTTTCCCTCTGCCACAGTTATCAAGAATGGGTCAGGAGACCGCTGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000650871.1
CDS-3UTR TCA 90 bp TGGGGCTGTTTTCCATGTTGCTTTCCTTGCAGGACTTATGCCCAGAAGCAGCGGCTTCTGAGTTCCCTCTaGACATTCTTACCCATTAGG +
Preference number: 4 (lower is better)
Translates to: WGCFPCCFPCRTYAQKQRLLSSL*TFLPIR
Trigger: CCTAATGGGTAAGAATGTTCAGAGGGAACTCAGAAG...CCGCTGCTTCTGGGCATAAGTCCTGCAAGGAAAGCAACATGGAAAACAGCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000650871.1
CDS-3UTR TCA 90 bp GAAGTGGTGCCAGAGCCCCTTCTGCTCCTTATAGTCTTTCCCAACATACCTCCCCTTCTGAGTTCCCTCTaGACATTCTTACCCATTAGG +
Preference number: 4 (lower is better)
Translates to: EVVPEPLLLLIVFPNIPPLLSSL*TFLPIR
Trigger: CCTAATGGGTAAGAATGTTCAGAGGGAACTCAGAAG...GGGAGGTATGTTGGGAAAGACTATAAGGAGCAGAAGGGGCTCTGGCACCACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509722.5
CDS-3UTR TCA 90 bp TGGCTTTATAAGCATCTGGCATTTCCCCTGCTGGCACTCATTCTCTCTCCTGCTAAGGCAGTGGAACACTaGGTGTCCACCAGATGTTCT +
Preference number: 4 (lower is better)
Translates to: WLYKHLAFPLLALILSPAKAVEH*VSTRCS
Trigger: AGAACATCTGGTGGACACTCAGTGTTCCACTGCCTT...AGCAGGAGAGAGAATGAGTGCCAGCAGGGGAAATGCCAGATGCTTATAAAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR TCA 90 bp AGACAAGGCAGTGGAACACTGAGTGTCCACCAGATGTTCTTTGCCAGGCTCTTTAGAAGCAGAACGATATaGGGGTCTGGAGTGAGCAGA +
Preference number: 4 (lower is better)
Translates to: RQGSGTLSVHQMFFARLFRSRTI*GSGVSR
Trigger: TCTGCTCACTCCAGACCCTCATATCGTTCTGCTTCT...AAAGAGCCTGGCAAAGAACATCTGGTGGACACTCAGTGTTCCACTGCCTTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509722.5
CDS-3UTR TCA 90 bp CCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAATTCTTCTTTTTGGACTaGAGGATGTGTGCCCATATT +
Preference number: 4 (lower is better)
Translates to: PLANHWPEPVSRPCPSPKFFFLD*RMCAHI
Trigger: AATATGGGCACACATCCTTCAGTCCAAAAAGAAGAA...TTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR TCA 90 bp GCAGAGGGAAAGAGGCTCTGCAGGATCTTGTGCTGCCAATTAAATGCAGGACTTTTGTGCAGGACCCTGTaGAAGTCTAAGGGTGCATCT +
Preference number: 4 (lower is better)
Translates to: AEGKRLCRILCCQLNAGLLCRTL*KSKGAS
Trigger: AGATGCACCCTTAGACTTTCACAGGGTCCTGCACAA...AAGTCCTGCATTTAATTGGCAGCACAAGATCCTGCAGAGCCTCTTTCCCTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR TCA 90 bp GCAGAGGGAAAGAGGCTCTGCAGGATCTTGTGCTGCCAATTAAATGCAGGACTTCTGGAGTCAGGATTTTaGACAGGCCAATTAGGGGTG +
Preference number: 4 (lower is better)
Translates to: AEGKRLCRILCCQLNAGLLESGF*TGQLGV
Trigger: CACCCCTAATTGGCCTGTTCAAAATCCTGACTCCAG...AAGTCCTGCATTTAATTGGCAGCACAAGATCCTGCAGAGCCTCTTTCCCTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR TCA 90 bp TGGCTTTATAAGCATCTGGCATTTCCCCTGCTGGCACTCATTCTCTCTCCTGCTCATCTTTCCCGGCAATaGAACCCAAGAACTCCCACT +
Preference number: 4 (lower is better)
Translates to: WLYKHLAFPLLALILSPAHLSRQ*NPRTPT
Trigger: AGTGGGAGTTCTTGGGTTTCATTGCCGGGAAAGATG...AGCAGGAGAGAGAATGAGTGCCAGCAGGGGAAATGCCAGATGCTTATAAAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR TCA 90 bp CCCACTGTCCACCCTCTGATAAGCCCTGGTGTGTGTTGTTCCCTCTATGTGTCCGCATGGTTTCTCCATTaGAGGTCTAGTCAAAGAAAG +
Preference number: 4 (lower is better)
Translates to: PTVHPLISPGVCCSLYVSAWFLH*RSSQRK
Trigger: CTTTCTTTGACTAGACCTTCAATGGAGAAACCATGC...GGACACATAGAGGGAACAACACACACCAGGGCTTATCAGAGGGTGGACAGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR GCA 90 bp GCAGGACTTAAAGTGATACTGATCAATTCCTCTTGCAAATCATTGGCCAGAACCAGGGACGCCAGTAACTaGTGCAACCCGGCGCCAATC +
Preference number: 4 (lower is better)
Translates to: AGLKVILINSSCKSLARTRDASN*CNPAPI
Trigger: GATTGGCGCCGGGTTGCAGCAGTTACTGGCGTCCCT...GGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAGTATCACTTTAAGTCCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000505127.5
ENST00000650871.1
CDS-3UTR GCA 90 bp TGGGGCTGTTTTCCATGTTGCTTTCCTTGCAGGACTTATGCCCAGAAGCAGCGGATCCGGCTGAGGAAGTaGCAAATATCCTACAATGGA +
Preference number: 4 (lower is better)
Translates to: WGCFPCCFPCRTYAQKQRIRLRK*QISYNG
Trigger: TCCATTGTAGGATATTTGGCACTTCCTCAGCCGGAT...CCGCTGCTTCTGGGCATAAGTCCTGCAAGGAAAGCAACATGGAAAACAGCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000650871.1
CDS-3UTR GCA 90 bp CAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGTTTTGGAAATCCCCTTaGCCATGCAAGATAAGTTTA +
Preference number: 4 (lower is better)
Translates to: QIIGQNLCHGPAQAPKDQFWKSP*PCKISL
Trigger: TAAACTTATCTTGCATGGGCAAGGGGATTTCCAAAA...CTGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp AAGCAGCGGTCTCCTGACCCATTCTTGATAACTGTGGCAGAGGGAAAGAGGCTCTGTGAATGCAATGAATaGATAGCTCTGCCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: KQRSPDPFLITVAEGKRLCECNE*IALPSL
Trigger: CAGGGAAGGCAGAGCTATGCATTCATTGCATTCACA...GAGCCTCTTTCCCTCTGCCACAGTTATCAAGAATGGGTCAGGAGACCGCTGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000650871.1
CDS-3UTR GCA 90 bp CCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAATTTAAATGTAGGGCCTaGGCCTCTTTCACTAATTTC +
Preference number: 4 (lower is better)
Translates to: PLANHWPEPVSRPCPSPKFKCRA*ASFTNF
Trigger: GAAATTAGTGAAAGAGGCGCAGGCCCTACATTTAAA...TTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp ACTGTGGCAGAGGGAAAGAGGCTCTGCAGGATCTTGTGCTGCCAATTAAATGCACATCAGGTTGCAAGGTaGGAGCCTCAAGGATCTCTT +
Preference number: 4 (lower is better)
Translates to: TVAEGKRLCRILCCQLNAHQVAR*EPQGSL
Trigger: AAGAGATCCTTGAGGCTCGCACCTTGCAACCTGATG...TGCATTTAATTGGCAGCACAAGATCCTGCAGAGCCTCTTTCCCTCTGCCACAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp GCAGAGGGAAAGAGGCTCTGCAGGATCTTGTGCTGCCAATTAAATGCAGGACTTTCAAAGTCATCAGGTTaGAAGGTGCGAGCCTCAAGG +
Preference number: 4 (lower is better)
Translates to: AEGKRLCRILCCQLNAGLSKSSG*KVRASR
Trigger: CCTTGAGGCTCGCACCTTGCAACCTGATGACTTTGA...AAGTCCTGCATTTAATTGGCAGCACAAGATCCTGCAGAGCCTCTTTCCCTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp ACTGTGGCAGAGGGAAAGAGGCTCTGCAGGATCTTGTGCTGCCAATTAAATGCACAAAAGAGCACTATGTaGTCGGTGGAGTTGACTGGG +
Preference number: 4 (lower is better)
Translates to: TVAEGKRLCRILCCQLNAQKSTM*SVELTG
Trigger: CCCAGTCAACTCCACCGAGCACATAGTGCTCTTTTG...TGCATTTAATTGGCAGCACAAGATCCTGCAGAGCCTCTTTCCCTCTGCCACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp GATACTGATCAATTCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTTGTCACATAGTGCTGTaGGGTCATCTGTCGCTCCAC +
Preference number: 4 (lower is better)
Translates to: DTDQFLLQIIGQNLCHGPCHIVL*GHLSLH
Trigger: GTGGAGCGACAGATGACCGCACAGCACTATGTGACA...AGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAGTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp CCCACTGTCCACCCTCTGATAAGCCCTGGTGTGTGTTGTTCCCTCTATGTGTCCGGCTGTTTTCCATGTTaGTTTCCTTGCAGGACTTAT +
Preference number: 4 (lower is better)
Translates to: PTVHPLISPGVCCSLYVSGCFPC*FPCRTY
Trigger: ATAAGTCCTGCAAGGAAAGCAACATGGAAAACAGCC...GGACACATAGAGGGAACAACACACACCAGGGCTTATCAGAGGGTGGACAGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR GCA 90 bp TTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACGGCTTAAACAACACATaGCTTTCTCAAGAGTGCTTT +
Preference number: 4 (lower is better)
Translates to: LQIIGQNLCHGPAQAPKDGLNNT*LSQECF
Trigger: AAAGCACTCTTGAGAAAGGCATGTGTTGTTTAAGCC...GTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000650871.1
CDS-3UTR GCA 90 bp CCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGCTTAAACAACACATaGCTTTCTCAAGAGTGCTTT +
Preference number: 4 (lower is better)
Translates to: PLANHWPEPVSRPCPSPKGLNNT*LSQECF
Trigger: AAAGCACTCTTGAGAAAGGCATGTGTTGTTTAAGCC...TTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000650871.1
CDS-3UTR GCA 90 bp ACTGTGGCAGAGGGAAAGAGGCTCTGCAGGATCTTGTGCTGCCAATTAAATGCAATCTGGCATTTCCCCTaGTGGCACTCATTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: TVAEGKRLCRILCCQLNAIWHFP*WHSFSL
Trigger: GAGAGAGAATGAGTGCCAGCAGGGGAAATGCCAGAT...TGCATTTAATTGGCAGCACAAGATCCTGCAGAGCCTCTTTCCCTCTGCCACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CCA 90 bp GATACTGATCAATTCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTCTCTTCCGACACATCTaGCGCTTCCAACAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: DTDQFLLQIIGQNLCHGPLFRHI*RFQQEL
Trigger: CAGCTCTTGTTGGAAGCGCCAGATGTGTCGGAAGAG...AGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAGTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp CATTTCTGTACAGCCAGGTACCCGTTGCTCCATTGTTGCTTATTAGACTGCTCAAAAGCTCTGCAGCGCTaGTCCTCGCTCTTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: HFCTARYPLLHCCLLDCSKALQR*SSLLSS
Trigger: AGAGGACAAGAGCGAGGACCAGCGCTGCAGAGCTTT...TGAGCAGTCTAATAAGCAACAATGGAGCAACGGGTACCTGGCTGTACAGAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515330.5
CDS-3UTR CCA 90 bp TCATTTCTGTACAGCCAGGTACCCGTTGCTCCATTGTTGCTTATTAGACTGCTCGGGTCCTTAACTCGCTaGGGAGTAAAGCTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: SFLYSQVPVAPLLLIRLLGSLTR*GVKLCS
Trigger: GCTGCAGAGCTTTACTCCCCAGCGAGTTAAGGACCC...GAGCAGTCTAATAAGCAACAATGGAGCAACGGGTACCTGGCTGTACAGAAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515330.5
CDS-3UTR CCA 90 bp CCTGAGGTCTCCCCAGCCATGTGGAACTGTGAGTTAATTAAACCTCTTTTCTTTGGCAATTGGCGTGGCTaGCTGCAACTTGTGGAGACC +
Preference number: 4 (lower is better)
Translates to: PEVSPAMWNCELIKPLFFGNWRG*LQLVET
Trigger: GGTCTCCACAAGTTGCAGCCAGCCACGCCAATTGCC...AAAGAAAAGAGGTTTAATTAACTCACAGTTCCACATGGCTGGGGAGACCTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CCA 90 bp GCAGGACTTAAAGTGATACTGATCAATTCCTCTTGCAAATCATTGGCCAGAACCCACCTGCGGGGCAATTaGCGTGGCTGGCTGCAACTT +
Preference number: 4 (lower is better)
Translates to: AGLKVILINSSCKSLARTHLRGN*RGWLQL
Trigger: AAGTTGCAGCCAGCCACGCCAATTGCCCCGCAGGTG...GGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAGTATCACTTTAAGTCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp TCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAACCAAATATCCTACAATaGAGGCCCATATTAACTCTG +
Preference number: 4 (lower is better)
Translates to: SSCKSLARTCVTALPKPQPNILQ*RPILTL
Trigger: CAGAGTTAATATGGGCCTCCATTGTAGGATATTTGG...TTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp GCAGAGGGAAAGAGGCTCTGCAGGATCTTGTGCTGCCAATTAAATGCAGGACTTGTATACCTAGCGACGTaGAGAGGCCCTTTTTATCCG +
Preference number: 4 (lower is better)
Translates to: AEGKRLCRILCCQLNAGLVYLAT*RGPFYP
Trigger: CGGATAAAAAGGGCCTCTCCACGTCGCTAGGTATAC...AAGTCCTGCATTTAATTGGCAGCACAAGATCCTGCAGAGCCTCTTTCCCTCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp CCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAAATCGTTCTTGCTCATaGAAACAAAGATGTCTGCCA +
Preference number: 4 (lower is better)
Translates to: PLANHWPEPVSRPCPSPKNRSCS*KQRCLP
Trigger: TGGCAGACATCTTTGTTTCCATGAGCAAGAACGATT...TTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp ACTGTGGCAGAGGGAAAGAGGCTCTGCAGGATCTTGTGCTGCCAATTAAATGCAATTGCTGTAGTCCGATaGCTCAGTCTCAGTCTCCAC +
Preference number: 4 (lower is better)
Translates to: TVAEGKRLCRILCCQLNAIAVVR*LSLSLH
Trigger: GTGGAGACTGAGACTGAGCCATCGGACTACAGCAAT...TGCATTTAATTGGCAGCACAAGATCCTGCAGAGCCTCTTTCCCTCTGCCACAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp TGGCTTTATAAGCATCTGGCATTTCCCCTGCTGGCACTCATTCTCTCTCCTGCTATTGCTGTAGTCCGATaGCTCAGTCTCAGTCTCCAC +
Preference number: 4 (lower is better)
Translates to: WLYKHLAFPLLALILSPAIAVVR*LSLSLH
Trigger: GTGGAGACTGAGACTGAGCCATCGGACTACAGCAAT...AGCAGGAGAGAGAATGAGTGCCAGCAGGGGAAATGCCAGATGCTTATAAAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CCA 90 bp CAGCTTGCAGGCTTCTGCAGCGGACAGCAAATGGTGGTCAAACTCCTTCAGCAGATATTTCTGACTTCCTaGATACCTTCTGGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: QLAGFCSGQQMVVKLLQQIFLTS*IPSGAP
Trigger: AGGAGCTCCAGAAGGTATCCAGGAAGTCAGAAATAT...CTGCTGAAGGAGTTTGACCACCATTTGCTGTCCGCTGCAGAAGCCTGCAAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509722.5
CDS-3UTR CCA 90 bp AATTCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCAACGATATGAGGGTCTaGAGTGAGCAGAAGTATTTC +
Preference number: 4 (lower is better)
Translates to: NSSCKSLARTCVTALPKPNDMRV*SEQKYF
Trigger: GAAATACTTCTGCTCACTCCAGACCCTCATATCGTT...GGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp CCCACTGTCCACCCTCTGATAAGCCCTGGTGTGTGTTGTTCCCTCTATGTGTCCAACGATATGAGGGTCTaGAGTGAGCAGAAGTATTTC +
Preference number: 4 (lower is better)
Translates to: PTVHPLISPGVCCSLYVSNDMRV*SEQKYF
Trigger: GAAATACTTCTGCTCACTCCAGACCCTCATATCGTT...GGACACATAGAGGGAACAACACACACCAGGGCTTATCAGAGGGTGGACAGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CCA 90 bp AAGCAGCGGTCTCCTGACCCATTCTTGATAACTGTGGCAGAGGGAAAGAGGCTCGGCCACCACTTTTTCTaGAGTCAGGATTTTGAACAG +
Preference number: 4 (lower is better)
Translates to: KQRSPDPFLITVAEGKRLGHHFF*SQDFEQ
Trigger: CTGTTCAAAATCCTGACTCCAGAAAAAGTGGTGGCC...GAGCCTCTTTCCCTCTGCCACAGTTATCAAGAATGGGTCAGGAGACCGCTGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CCA 90 bp AAGTTTCCTGAGGTCTCCCCAGCCATGTGGAACTGTGAGTTAATTAAACCTCTTGCCCTGCTCTGCGACTaGGCCACCACTTTTTCTGGA +
Preference number: 4 (lower is better)
Translates to: KFPEVSPAMWNCELIKPLALLCD*ATTFSG
Trigger: TCCAGAAAAAGTGGTGGCCCAGTCGCAGAGCAGGGC...AAGAGGTTTAATTAACTCACAGTTCCACATGGCTGGGGAGACCTCAGGAAACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CCA 90 bp AAGTTTCCTGAGGTCTCCCCAGCCATGTGGAACTGTGAGTTAATTAAACCTCTTCCTCCTCATCCACTGTaGAGGCATCAGGGTCGATGC +
Preference number: 4 (lower is better)
Translates to: KFPEVSPAMWNCELIKPLPPHPL*RHQGRC
Trigger: GCATCGACCCTGATGCCTCCACAGTGGATGAGGAGG...AAGAGGTTTAATTAACTCACAGTTCCACATGGCTGGGGAGACCTCAGGAAACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CCA 90 bp GCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCACCAAGCCATATTCTGTaGCTTTGTATTCTGTTTTCA +
Preference number: 4 (lower is better)
Translates to: ANHWPEPVSRPCPSPKGPPSHIL*LCILFS
Trigger: TGAAAACAGAATACAAAGCCACAGAATATGGCTTGG...TGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp CAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGCCAAGCCATATTCTGTaGCTTTGTATTCTGTTTTCA +
Preference number: 4 (lower is better)
Translates to: QIIGQNLCHGPAQAPKDQPSHIL*LCILFS
Trigger: TGAAAACAGAATACAAAGCCACAGAATATGGCTTGG...CTGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp ACTGTGGCAGAGGGAAAGAGGCTCTGCAGGATCTTGTGCTGCCAATTAAATGCACCTCTTGCAAATCATTaGCCAGAACCTGTGTCACGG +
Preference number: 4 (lower is better)
Translates to: TVAEGKRLCRILCCQLNAPLANH*PEPVSR
Trigger: CCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGG...TGCATTTAATTGGCAGCACAAGATCCTGCAGAGCCTCTTTCCCTCTGCCACAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp GCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGCTCTAAAATCTCAATaGCTTAAACAACACATGCCT +
Preference number: 4 (lower is better)
Translates to: ANHWPEPVSRPCPSPKGPALKSQ*LKQHMP
Trigger: AGGCATGTGTTGTTTAAGCCATTGAGATTTTAGAGC...TGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000650871.1
CDS-3UTR CCA 90 bp TGCTGTGCGGTCATCTGTCGCTCCACATCAGTGAAGTGGTGCCAGAGCCCCTTCGCTCTAAAATCTCAATaGCTTAAACAACACATGCCT +
Preference number: 4 (lower is better)
Translates to: CCAVICRSTSVKWCQSPFALKSQ*LKQHMP
Trigger: AGGCATGTGTTGTTTAAGCCATTGAGATTTTAGAGC...GAAGGGGCTCTGGCACCACTTCACTGATGTGGAGCGACAGATGACCGCACAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505127.5
CDS-3UTR CCA 90 bp TGGCTTTATAAGCATCTGGCATTTCCCCTGCTGGCACTCATTCTCTCTCCTGCTAATTCCCATGTGTCATaGGAAGGACCTGGTAGGAGG +
Preference number: 4 (lower is better)
Translates to: WLYKHLAFPLLALILSPANSHVS*EGPGRR
Trigger: CCTCCTACCAGGTCCTTCCCATGACACATGGGAATT...AGCAGGAGAGAGAATGAGTGCCAGCAGGGGAAATGCCAGATGCTTATAAAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CCA 90 bp CCCACTGTCCACCCTCTGATAAGCCCTGGTGTGTGTTGTTCCCTCTATGTGTCCGGTTACATTGTGATATaGTTTGGCTTTGTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: PTVHPLISPGVCCSLYVSGYIVI*FGFVSP
Trigger: TGGGGACACAAAGCCAAACCATATCACAATGTAACC...GGACACATAGAGGGAACAACACACACCAGGGCTTATCAGAGGGTGGACAGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
3UTR CAA 72 bp CTTAAAGTGATACTGATCAATTCCTCTTGCAAATCATaGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCC +
Preference number: 4 (lower is better)
Translates to: LKVILINSSCKS*ARTCVTALPKP
Trigger: GGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAGTATCACTTTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
3UTR CAA 72 bp AGCTCCTGTTTTCCAGTAACAGGCTCATCATCTCTCTaGGTGAGGAGGCCAATCTCAAAGGCCTCTTTGGCT +
Preference number: 4 (lower is better)
Translates to: SSCFPVTGSSSL*VRRPISKASLA
Trigger: AGCCAAAGAGGCCTTTGAGATTGGCCTCCTCACCAAGAGAGATGATGAGCCTGTTACTGGAAAACAGGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR CAA 72 bp GCTGTAGTCCGATGGCTCAGTCTCAGTCTCCACATCTaGATCCAAGGAGACTCGAAATGCATCAGAATGGGT +
Preference number: 4 (lower is better)
Translates to: AVVRWLSLSLHI*IQGDSKCIRMG
Trigger: ACCCATTCTGATGCATTTCGAGTCTCCTTGGATCAAGATGTGGAGACTGAGACTGAGCCATCGGACTACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509722.5
CDS-3UTR TCA 90 bp GAAGAACCACTGGAAAATGCAGGTGATTTCAGCCACCACACTGAGGATGAGCTGCCCTTTTTATCCGGCTaGGGAAGTGCCAAATATCCT +
Preference number: 4 (lower is better)
Translates to: EEPLENAGDFSHHTEDELPFLSG*GSAKYP
Trigger: AGGATATTTGGCACTTCCTCAGCCGGATAAAAAGGG...CAGCTCATCCTCAGTGTGGTGGCTGAAATCACCTGCATTTTCCAGTGGTTCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509722.5
CDS-3UTR TCA 90 bp CCTGAGGTCTCCCCAGCCATGTGGAACTGTGAGTTAATTAAACCTCTTTTCTTTGCTTCCTTACAGAGCTaGCTTGCTGCATGGACCGTC +
Preference number: 4 (lower is better)
Translates to: PEVSPAMWNCELIKPLFFASLQS*LAAWTV
Trigger: GACGGTCCATGCAGCAAGTCAGCTCTGTAAGGAAGC...AAAGAAAAGAGGTTTAATTAACTCACAGTTCCACATGGCTGGGGAGACCTCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR TCA 90 bp ACTGTGGCAGAGGGAAAGAGGCTCTGCAGGATCTTGTGCTGCCAATTAAATGCACACTCAGAGACTTGTTaGAAACAGCTCCCTCACCAT +
Preference number: 4 (lower is better)
Translates to: TVAEGKRLCRILCCQLNAHSETC*KQLPHH
Trigger: ATGGTGAGGGAGCTGTTTTCAACAAGTCTCTGAGTG...TGCATTTAATTGGCAGCACAAGATCCTGCAGAGCCTCTTTCCCTCTGCCACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR TCA 90 bp GATACTGATCAATTCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTTTGTGCAGGACCCTGTaGAAGTCTAAGGGTGCATCT +
Preference number: 4 (lower is better)
Translates to: DTDQFLLQIIGQNLCHGPLCRTL*KSKGAS
Trigger: AGATGCACCCTTAGACTTTCACAGGGTCCTGCACAA...AGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAGTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR TCA 90 bp GATACTGATCAATTCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTCTGGAGTCAGGATTTTaGACAGGCCAATTAGGGGTG +
Preference number: 4 (lower is better)
Translates to: DTDQFLLQIIGQNLCHGPLESGF*TGQLGV
Trigger: CACCCCTAATTGGCCTGTTCAAAATCCTGACTCCAG...AGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAGTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR TCA 90 bp AAGCAGCGGTCTCCTGACCCATTCTTGATAACTGTGGCAGAGGGAAAGAGGCTCGCATGGTTTCTCCATTaGAGGTCTAGTCAAAGAAAG +
Preference number: 4 (lower is better)
Translates to: KQRSPDPFLITVAEGKRLAWFLH*RSSQRK
Trigger: CTTTCTTTGACTAGACCTTCAATGGAGAAACCATGC...GAGCCTCTTTCCCTCTGCCACAGTTATCAAGAATGGGTCAGGAGACCGCTGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000650871.1
CDS-3UTR TCA 90 bp TGGGGCTGTTTTCCATGTTGCTTTCCTTGCAGGACTTATGCCCAGAAGCAGCGGGCATGGTTTCTCCATTaGAGGTCTAGTCAAAGAAAG +
Preference number: 4 (lower is better)
Translates to: WGCFPCCFPCRTYAQKQRAWFLH*RSSQRK
Trigger: CTTTCTTTGACTAGACCTTCAATGGAGAAACCATGC...CCGCTGCTTCTGGGCATAAGTCCTGCAAGGAAAGCAACATGGAAAACAGCCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000650871.1
CDS-3UTR TCA 90 bp TTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACGACAGGAAAACAAATTaGATTCGTATCACAAAGGCT +
Preference number: 4 (lower is better)
Translates to: LQIIGQNLCHGPAQAPKDDRKTN*IRITKA
Trigger: AGCCTTTGTGATACGAATTCAATTTGTTTTCCTGTC...GTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000650871.1
CDS-3UTR TCA 90 bp TCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAGACAGGAAAACAAATTaGATTCGTATCACAAAGGCT +
Preference number: 4 (lower is better)
Translates to: SSCKSLARTCVTALPKPQDRKTN*IRITKA
Trigger: AGCCTTTGTGATACGAATTCAATTTGTTTTCCTGTC...TTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000650871.1
CDS-3UTR GCA 90 bp GACTGTGCCGTATTCTATGTGCATGGTTTCTCCATTGAAGGTCTAGTCAAAGAAGACGCCAGTAACTGCTaGAACCCGGCGCCAATCACA +
Preference number: 4 (lower is better)
Translates to: DCAVFYVHGFSIEGLVKEDASNC*NPAPIT
Trigger: TGTGATTGGCGCCGGGTTGCAGCAGTTACTGGCGTC...TTCTTTGACTAGACCTTCAATGGAGAAACCATGCACATAGAATACGGCACAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505127.5
CDS-3UTR GCA 90 bp GAAAGCAGCTTTGACAAAGCTGTGAAGCTCCTGTTTTCCAGTAACAGGCTCATCATTGGCGTGGCTGGCTaGAACTTGTGGAGACCTTTG +
Preference number: 4 (lower is better)
Translates to: ESSFDKAVKLLFSSNRLIIGVAG*NLWRPL
Trigger: CAAAGGTCTCCACAAGTTGCAGCCAGCCACGCCAAT...GATGAGCCTGTTACTGGAAAACAGGAGCTTCACAGCTTTGTCAAAGCTGCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509722.5
CDS-3UTR GCA 90 bp TGCTGTGCGGTCATCTGTCGCTCCACATCAGTGAAGTGGTGCCAGAGCCCCTTCTGTTGCTTATTAGACTaGTCAGAATATACTCTGCTT +
Preference number: 4 (lower is better)
Translates to: CCAVICRSTSVKWCQSPFCCLLD*SEYTLL
Trigger: AAGCAGAGTATATTCTGAGCAGTCTAATAAGCAACA...GAAGGGGCTCTGGCACCACTTCACTGATGTGGAGCGACAGATGACCGCACAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505127.5
ENST00000509722.5
CDS-3UTR GCA 90 bp AAGCAGCGGTCTCCTGACCCATTCTTGATAACTGTGGCAGAGGGAAAGAGGCTCCCGTTGCTCCATTGTTaGTTATTAGACTGCTCAGAA +
Preference number: 4 (lower is better)
Translates to: KQRSPDPFLITVAEGKRLPLLHC*LLDCSE
Trigger: TTCTGAGCAGTCTAATAAGCAACAATGGAGCAACGG...GAGCCTCTTTCCCTCTGCCACAGTTATCAAGAATGGGTCAGGAGACCGCTGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000650871.1
CDS-3UTR GCA 90 bp GAAGTGGTGCCAGAGCCCCTTCTGCTCCTTATAGTCTTTCCCAACATACCTCCCCCGTTGCTCCATTGTTaGTTATTAGACTGCTCAGAA +
Preference number: 4 (lower is better)
Translates to: EVVPEPLLLLIVFPNIPPPLLHC*LLDCSE
Trigger: TTCTGAGCAGTCTAATAAGCAACAATGGAGCAACGG...GGGAGGTATGTTGGGAAAGACTATAAGGAGCAGAAGGGGCTCTGGCACCACTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000505127.5
ENST00000509722.5
CDS-3UTR GCA 90 bp TGGCATTTCCCCTGCTGGCACTCATTCTCTCTCCTGCTACCCTATGAAGAGGTGCCGTTGCTCCATTGTTaGTTATTAGACTGCTCAGAA +
Preference number: 4 (lower is better)
Translates to: WHFPCWHSFSLLLPYEEVPLLHC*LLDCSE
Trigger: TTCTGAGCAGTCTAATAAGCAACAATGGAGCAACGG...CACCTCTTCATAGGGTAGCAGGAGAGAGAATGAGTGCCAGCAGGGGAAATGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR GCA 90 bp ACTGTGGCAGAGGGAAAGAGGCTCTGCAGGATCTTGTGCTGCCAATTAAATGCATGTATACAGACCGACTaGACCAGGACCTTGTCACTT +
Preference number: 4 (lower is better)
Translates to: TVAEGKRLCRILCCQLNACIQTD*TRTLSL
Trigger: AAGTGACAAGGTCCTGGTGCAGTCGGTCTGTATACA...TGCATTTAATTGGCAGCACAAGATCCTGCAGAGCCTCTTTCCCTCTGCCACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp GCAGAGGGAAAGAGGCTCTGCAGGATCTTGTGCTGCCAATTAAATGCAGGACTTGTACAGCTTCCCCATTaGTTCCTTACAGAGCTGACT +
Preference number: 4 (lower is better)
Translates to: AEGKRLCRILCCQLNAGLVQLPH*FLTELT
Trigger: AGTCAGCTCTGTAAGGAAGCAATGGGGAAGCTGTAC...AAGTCCTGCATTTAATTGGCAGCACAAGATCCTGCAGAGCCTCTTTCCCTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp AGACAAGGCAGTGGAACACTGAGTGTCCACCAGATGTTCTTTGCCAGGCTCTTTGTACAGCTTCCCCATTaGTTCCTTACAGAGCTGACT +
Preference number: 4 (lower is better)
Translates to: RQGSGTLSVHQMFFARLFVQLPH*FLTELT
Trigger: AGTCAGCTCTGTAAGGAAGCAATGGGGAAGCTGTAC...AAAGAGCCTGGCAAAGAACATCTGGTGGACACTCAGTGTTCCACTGCCTTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509722.5
CDS-3UTR GCA 90 bp GCAGGACTTAAAGTGATACTGATCAATTCCTCTTGCAAATCATTGGCCAGAACCGTCGATGCCCTGCTCTaGGACTGGGCCACCACTTTT +
Preference number: 4 (lower is better)
Translates to: AGLKVILINSSCKSLARTVDALL*DWATTF
Trigger: AAAAGTGGTGGCCCAGTCGCAGAGCAGGGCATCGAC...GGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAGTATCACTTTAAGTCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp AAACTCATAAGAAAAATGGCCATAGGCCAAGCCATATTCTGTGGCTTTGTATTCTCAGGGTCGATGCCCTaGTCTGCGACTGGGCCACCA +
Preference number: 4 (lower is better)
Translates to: KLIRKMAIGQAIFCGFVFSGSMP*SATGPP
Trigger: TGGTGGCCCAGTCGCAGAGCAGGGCATCGACCCTGA...GAATACAAAGCCACAGAATATGGCTTGGCCTATGGCCATTTTTCTTATGAGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509722.5
CDS-3UTR GCA 90 bp CATTGCTGTAGTCCGATGGCTCAGTCTCAGTCTCCACATCTTGATCCAAGGAGAAGCTGGAGTTCTGGCTaGAGTTTAGCATGTTTCCAG +
Preference number: 4 (lower is better)
Translates to: HCCSPMAQSQSPHLDPRRSWSSG*SLACFQ
Trigger: CTGGAAACATGCTAAACTGCAGCCAGAACTCCAGCT...TCTCCTTGGATCAAGATGTGGAGACTGAGACTGAGCCATCGGACTACAGCAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509722.5
CDS-3UTR GCA 90 bp GATACTGATCAATTCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTCATCAGGTTGCAAGGTaGGAGCCTCAAGGATCTCTT +
Preference number: 4 (lower is better)
Translates to: DTDQFLLQIIGQNLCHGPHQVAR*EPQGSL
Trigger: AAGAGATCCTTGAGGCTCGCACCTTGCAACCTGATG...AGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAGTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp TGGCATTTCCCCTGCTGGCACTCATTCTCTCTCCTGCTACCCTATGAAGAGGTGCTGATCAATTCCTCTTaGAAATCATTGGCCAGAACC +
Preference number: 4 (lower is better)
Translates to: WHFPCWHSFSLLLPYEEVLINSS*KSLART
Trigger: GGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAG...CACCTCTTCATAGGGTAGCAGGAGAGAGAATGAGTGCCAGCAGGGGAAATGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR GCA 90 bp GAAGTGGTGCCAGAGCCCCTTCTGCTCCTTATAGTCTTTCCCAACATACCTCCCTGCAGGATCTTGTGCTaGCAATTAAATGCAGGACTT +
Preference number: 4 (lower is better)
Translates to: EVVPEPLLLLIVFPNIPPCRILC*QLNAGL
Trigger: AAGTCCTGCATTTAATTGGCAGCACAAGATCCTGCA...GGGAGGTATGTTGGGAAAGACTATAAGGAGCAGAAGGGGCTCTGGCACCACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505127.5
ENST00000509722.5
CDS-3UTR CCA 90 bp GCAGAGGGAAAGAGGCTCTGCAGGATCTTGTGCTGCCAATTAAATGCAGGACTTATGATTACGATGAATTaGGTGTCCCTGGGTCTAGGG +
Preference number: 4 (lower is better)
Translates to: AEGKRLCRILCCQLNAGLMITMN*VSLGLG
Trigger: CCCTAGACCCAGGGACACCCAATTCATCGTAATCAT...AAGTCCTGCATTTAATTGGCAGCACAAGATCCTGCAGAGCCTCTTTCCCTCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp GCCCCTTCTGCTCCTTATAGTCTTTCCCAACATACCTCCCCAGAATTTCTTCTTCTCTTCCGACACATCTaGCGCTTCCAACAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: APSAPYSLSQHTSPEFLLLFRHI*RFQQEL
Trigger: CAGCTCTTGTTGGAAGCGCCAGATGTGTCGGAAGAG...AAGAAGAAATTCTGGGGAGGTATGTTGGGAAAGACTATAAGGAGCAGAAGGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505127.5
ENST00000509722.5
CDS-3UTR CCA 90 bp CATTTCTGTACAGCCAGGTACCCGTTGCTCCATTGTTGCTTATTAGACTGCTCACTCTTCCGACACATCTaGCGCTTCCAACAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: HFCTARYPLLHCCLLDCSLFRHI*RFQQEL
Trigger: CAGCTCTTGTTGGAAGCGCCAGATGTGTCGGAAGAG...TGAGCAGTCTAATAAGCAACAATGGAGCAACGGGTACCTGGCTGTACAGAAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515330.5
CDS-3UTR CCA 90 bp ACTGTGGCAGAGGGAAAGAGGCTCTGCAGGATCTTGTGCTGCCAATTAAATGCAGTTTGTTTTGTCCTCTaGGCCCACGGCTTGTTTGTA +
Preference number: 4 (lower is better)
Translates to: TVAEGKRLCRILCCQLNAVCFVL*AHGLFV
Trigger: TACAAACAAGCCGTGGGCCCAGAGGACAAAACAAAC...TGCATTTAATTGGCAGCACAAGATCCTGCAGAGCCTCTTTCCCTCTGCCACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000505127.5
ENST00000650871.1
CDS-3UTR CCA 90 bp GCCAACAGCTTTTCAAAGTCATCAGGTTGCAAGGTGCGAGCCTCAAGGATCTCTACTTGTGGAGACCTTTaGCGACCTGCAGAAGTTTTC +
Preference number: 4 (lower is better)
Translates to: ANSFSKSSGCKVRASRISTCGDL*RPAEVF
Trigger: GAAAACTTCTGCAGGTCGCCAAAGGTCTCCACAAGT...AGAGATCCTTGAGGCTCGCACCTTGCAACCTGATGACTTTGAAAAGCTGTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509722.5
CDS-3UTR CCA 90 bp GATTGTAAGTTTCCTGAGGTCTCCCCAGCCATGTGGAACTGTGAGTTAATTAAAGCTGGCTGCAACTTGTaGAGACCTTTGGCGACCTGC +
Preference number: 4 (lower is better)
Translates to: DCKFPEVSPAMWNCELIKAGCNL*RPLATC
Trigger: GCAGGTCGCCAAAGGTCTCCACAAGTTGCAGCCAGC...TTTAATTAACTCACAGTTCCACATGGCTGGGGAGACCTCAGGAAACTTACAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CCA 90 bp AATTCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCAATCGTTCTTGCTCATaGAAACAAAGATGTCTGCCA +
Preference number: 4 (lower is better)
Translates to: NSSCKSLARTCVTALPKPNRSCS*KQRCLP
Trigger: TGGCAGACATCTTTGTTTCCATGAGCAAGAACGATT...GGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp TGGAAATCCCCTTGCCCATGCAAGATAAGTTTATCCAACCTGCACTCGAAACTCGCGGACAGCAAATGGTaGTCAAACTCCTTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: WKSPCPCKISLSNLHSKLADSKW*SNSFSR
Trigger: CCTGCTGAAGGAGTTTGACCACCATTTGCTGTCCGC...GAGTTTCGAGTGCAGGTTGGATAAACTTATCTTGCATGGGCAAGGGGATTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509722.5
CDS-3UTR CCA 90 bp TGGCATTTCCCCTGCTGGCACTCATTCTCTCTCCTGCTACCCTATGAAGAGGTGTCTCAAAGGCCTCTTTaGCTTCACACAGATGTAAGT +
Preference number: 4 (lower is better)
Translates to: WHFPCWHSFSLLLPYEEVSQRPL*LHTDVS
Trigger: ACTTACATCTGTGTGAAGCCAAAGAGGCCTTTGAGA...CACCTCTTCATAGGGTAGCAGGAGAGAGAATGAGTGCCAGCAGGGGAAATGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CCA 90 bp TTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACGTCTCTTTGACAATGTaGCTTTTCTTGAGTAGTACT +
Preference number: 4 (lower is better)
Translates to: LQIIGQNLCHGPAQAPKDVSLTM*LFLSST
Trigger: AGTACTACTCAAGAAAAGCCACATTGTCAAAGAGAC...GTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp GCCCCTTCTGCTCCTTATAGTCTTTCCCAACATACCTCCCCAGAATTTCTTCTTTGCCAGGCTCTTTTCTaGCTGACCTGTCGTCAACGT +
Preference number: 4 (lower is better)
Translates to: APSAPYSLSQHTSPEFLLCQALF*LTCRQR
Trigger: ACGTTGACGACAGGTCAGCCAGAAAAGAGCCTGGCA...AAGAAGAAATTCTGGGGAGGTATGTTGGGAAAGACTATAAGGAGCAGAAGGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000509722.5
CDS-3UTR CCA 90 bp CCCACTGTCCACCCTCTGATAAGCCCTGGTGTGTGTTGTTCCCTCTATGTGTCCCCAAATTGTCATTGTTaGGTTCCTGAAGAGAGAGAT +
Preference number: 4 (lower is better)
Translates to: PTVHPLISPGVCCSLYVSPNCHC*VPEERD
Trigger: ATCTCTCTCTTCAGGAACCCAACAATGACAATTTGG...GGACACATAGAGGGAACAACACACACCAGGGCTTATCAGAGGGTGGACAGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CCA 90 bp GATACTGATCAATTCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGGGCATCTGTTGCTGTaGCTGATTTTGAGAAGGCTC +
Preference number: 4 (lower is better)
Translates to: DTDQFLLQIIGQNLCHGPGHLLL*LILRRL
Trigger: GAGCCTTCTCAAAATCAGCCACAGCAACAGATGCCC...AGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAGTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp GCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAATCGCAGTTGGTTTCTaGAAACTCAACAATTATTTC +
Preference number: 4 (lower is better)
Translates to: ANHWPEPVSRPCPSPKGPIAVGF*KLNNYF
Trigger: GAAATAATTGTTGAGTTTCCAGAAACCAACTGCGAT...TGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp TGGGGCTGTTTTCCATGTTGCTTTCCTTGCAGGACTTATGCCCAGAAGCAGCGGAGCTACATGGCAGCATaGAAATGTTTCCCAGAGAAT +
Preference number: 4 (lower is better)
Translates to: WGCFPCCFPCRTYAQKQRSYMAA*KCFPEN
Trigger: ATTCTCTGGGAAACATTTCCATGCTGCCATGTAGCT...CCGCTGCTTCTGGGCATAAGTCCTGCAAGGAAAGCAACATGGAAAACAGCCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CCA 90 bp GCAGGACTTAAAGTGATACTGATCAATTCCTCTTGCAAATCATTGGCCAGAACCGCCCTGCTCTGCGACTaGGCCACCACTTTTTCTGGA +
Preference number: 4 (lower is better)
Translates to: AGLKVILINSSCKSLARTALLCD*ATTFSG
Trigger: TCCAGAAAAAGTGGTGGCCCAGTCGCAGAGCAGGGC...GGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAGTATCACTTTAAGTCCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp ACTGTGGCAGAGGGAAAGAGGCTCTGCAGGATCTTGTGCTGCCAATTAAATGCACCCAAGAACTCCCACTaGAATTCAGATAGGACCAAG +
Preference number: 4 (lower is better)
Translates to: TVAEGKRLCRILCCQLNAPKNSH*NSDRTK
Trigger: CTTGGTCCTATCTGAATTCCAGTGGGAGTTCTTGGG...TGCATTTAATTGGCAGCACAAGATCCTGCAGAGCCTCTTTCCCTCTGCCACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp GCAGAGGGAAAGAGGCTCTGCAGGATCTTGTGCTGCCAATTAAATGCAGGACTTCCCAAGAACTCCCACTaGAATTCAGATAGGACCAAG +
Preference number: 4 (lower is better)
Translates to: AEGKRLCRILCCQLNAGLPKNSH*NSDRTK
Trigger: CTTGGTCCTATCTGAATTCCAGTGGGAGTTCTTGGG...AAGTCCTGCATTTAATTGGCAGCACAAGATCCTGCAGAGCCTCTTTCCCTCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp AAAATAATGGCCTCCAGCTCTATCCATGTCCCTGCAAAGGACATGATCTCATTCTCCACATCAGTGAAGTaGTGCCAGAGCCCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: KIMASSSIHVPAKDMISFSTSVK*CQSPFC
Trigger: GCAGAAGGGGCTCTGGCACCACTTCACTGATGTGGA...GAATGAGATCATGTCCTTTGCAGGGACATGGATAGAGCTGGAGGCCATTATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CCA 90 bp CCCTGCTGGCACTCATTCTCTCTCCTGCTACCCTATGAAGAGGTGCCTTCTGCCGTCAAAGAAAGACGATaGCAGATTTCATTACATTCC +
Preference number: 4 (lower is better)
Translates to: PCWHSFSLLLPYEEVPSAVKERR*QISLHS
Trigger: GGAATGTAATGAAATCTGCCATCGTCTTTCTTTGAC...GGCAGAAGGCACCTCTTCATAGGGTAGCAGGAGAGAGAATGAGTGCCAGCAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CCA 90 bp TCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAGTCAAAGAAAGACGATaGCAGATTTCATTACATTCC +
Preference number: 4 (lower is better)
Translates to: SSCKSLARTCVTALPKPQVKERR*QISLHS
Trigger: GGAATGTAATGAAATCTGCCATCGTCTTTCTTTGAC...TTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp AATTCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCCATCAAGGACAGACTaGATAAAGAAAACTGTACCA +
Preference number: 4 (lower is better)
Translates to: NSSCKSLARTCVTALPKPPSRTD*IKKTVP
Trigger: TGGTACAGTTTTCTTTATCCAGTCTGTCCTTGATGG...GGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
3UTR CAA 72 bp AGGGGTACATGTGCAGGTTTGTGTCATGGGGGTTTGTaGTGCGAATTACTTCATCACCCAGGTATTCAGCCT +
Preference number: 4 (lower is better)
Translates to: RGTCAGLCHGGL*CELLHHPGIQP
Trigger: AGGCTGAATACCTGGGTGATGAAGTAATTCGCACAACAAACCCCCATGACACAAACCTGCACATGTACCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR TCA 90 bp TGGCTTTATAAGCATCTGGCATTTCCCCTGCTGGCACTCATTCTCTCTCCTGCTCTGGTACAGCCTCTCTaGAACACACTGTTTCTCATA +
Preference number: 4 (lower is better)
Translates to: WLYKHLAFPLLALILSPALVQPL*NTLFLI
Trigger: TATGAGAAACAGTGTGTTTCAGAGAGGCTGTACCAG...AGCAGGAGAGAGAATGAGTGCCAGCAGGGGAAATGCCAGATGCTTATAAAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR TCA 90 bp GATACTGATCAATTCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTCCCTTTTTATCCGGCTaGGGAAGTGCCAAATATCCT +
Preference number: 4 (lower is better)
Translates to: DTDQFLLQIIGQNLCHGPPFLSG*GSAKYP
Trigger: AGGATATTTGGCACTTCCTCAGCCGGATAAAAAGGG...AGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAGTATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR TCA 90 bp GCAGAGGGAAAGAGGCTCTGCAGGATCTTGTGCTGCCAATTAAATGCAGGACTTGCTTTGACAAAGCTGTaGAGCTCCTGTTTTCCAGTA +
Preference number: 4 (lower is better)
Translates to: AEGKRLCRILCCQLNAGLALTKL*SSCFPV
Trigger: TACTGGAAAACAGGAGCTTCACAGCTTTGTCAAAGC...AAGTCCTGCATTTAATTGGCAGCACAAGATCCTGCAGAGCCTCTTTCCCTCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR TCA 90 bp GCAGGACTTAAAGTGATACTGATCAATTCCTCTTGCAAATCATTGGCCAGAACCGCTTCCTTACAGAGCTaGCTTGCTGCATGGACCGTC +
Preference number: 4 (lower is better)
Translates to: AGLKVILINSSCKSLARTASLQS*LAAWTV
Trigger: GACGGTCCATGCAGCAAGTCAGCTCTGTAAGGAAGC...GGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAGTATCACTTTAAGTCCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR TCA 90 bp ACTGTGGCAGAGGGAAAGAGGCTCTGCAGGATCTTGTGCTGCCAATTAAATGCAACAGACATAACTTCTTaGGACAGAGCTTCTCTGTCC +
Preference number: 4 (lower is better)
Translates to: TVAEGKRLCRILCCQLNATDITS*DRASLS
Trigger: GGACAGAGAAGCTCTGTCTCAAGAAGTTATGTCTGT...TGCATTTAATTGGCAGCACAAGATCCTGCAGAGCCTCTTTCCCTCTGCCACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR TCA 90 bp ACTGTGGCAGAGGGAAAGAGGCTCTGCAGGATCTTGTGCTGCCAATTAAATGCACTTCTGAGTTCCCTCTaGACATTCTTACCCATTAGG +
Preference number: 4 (lower is better)
Translates to: TVAEGKRLCRILCCQLNALLSSL*TFLPIR
Trigger: CCTAATGGGTAAGAATGTTCAGAGGGAACTCAGAAG...TGCATTTAATTGGCAGCACAAGATCCTGCAGAGCCTCTTTCCCTCTGCCACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR TCA 90 bp GCAGAGGGAAAGAGGCTCTGCAGGATCTTGTGCTGCCAATTAAATGCAGGACTTTCAGTCTCCACATCTTaGTCCAAGGAGACTCGAAAT +
Preference number: 4 (lower is better)
Translates to: AEGKRLCRILCCQLNAGLSVSTS*SKETRN
Trigger: ATTTCGAGTCTCCTTGGATCAAGATGTGGAGACTGA...AAGTCCTGCATTTAATTGGCAGCACAAGATCCTGCAGAGCCTCTTTCCCTCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR TCA 90 bp TGGCTTTATAAGCATCTGGCATTTCCCCTGCTGGCACTCATTCTCTCTCCTGCTTCAGTCTCCACATCTTaGTCCAAGGAGACTCGAAAT +
Preference number: 4 (lower is better)
Translates to: WLYKHLAFPLLALILSPASVSTS*SKETRN
Trigger: ATTTCGAGTCTCCTTGGATCAAGATGTGGAGACTGA...AGCAGGAGAGAGAATGAGTGCCAGCAGGGGAAATGCCAGATGCTTATAAAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR TCA 90 bp CCTGAGGTCTCCCCAGCCATGTGGAACTGTGAGTTAATTAAACCTCTTTTCTTTTCCCCTGCCTGTCTTTaGCATCGCAGTTGGTTTCTG +
Preference number: 4 (lower is better)
Translates to: PEVSPAMWNCELIKPLFFSPACL*HRSWFL
Trigger: CAGAAACCAACTGCGATGTCAAAGACAGGCAGGGGA...AAAGAAAAGAGGTTTAATTAACTCACAGTTCCACATGGCTGGGGAGACCTCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR TCA 90 bp ACTGTGGCAGAGGGAAAGAGGCTCTGCAGGATCTTGTGCTGCCAATTAAATGCAGTATTCTCTAGTCTCTaGAACAGCCAATCATGCCTC +
Preference number: 4 (lower is better)
Translates to: TVAEGKRLCRILCCQLNAVFSSL*NSQSCL
Trigger: GAGGCATGATTGGCTGTTTCAGAGACTAGAGAATAC...TGCATTTAATTGGCAGCACAAGATCCTGCAGAGCCTCTTTCCCTCTGCCACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR TCA 90 bp TGGGGCTGTTTTCCATGTTGCTTTCCTTGCAGGACTTATGCCCAGAAGCAGCGGCTCTTCATAGCAGTGTaGGAGTGGATTAATACACAT +
Preference number: 4 (lower is better)
Translates to: WGCFPCCFPCRTYAQKQRLFIAV*EWINTH
Trigger: ATGTGTATTAATCCACTCTCACACTGCTATGAAGAG...CCGCTGCTTCTGGGCATAAGTCCTGCAAGGAAAGCAACATGGAAAACAGCCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR TCA 90 bp AAAATAATGGCCTCCAGCTCTATCCATGTCCCTGCAAAGGACATGATCTCATTCTCTCCTGCTACCCTATaGAGAGGTGCCTTCTGCCAT +
Preference number: 4 (lower is better)
Translates to: KIMASSSIHVPAKDMISFSPATL*RGAFCH
Trigger: ATGGCAGAAGGCACCTCTTCATAGGGTAGCAGGAGA...GAATGAGATCATGTCCTTTGCAGGGACATGGATAGAGCTGGAGGCCATTATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR GCA 90 bp GATACTGATCAATTCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTACTTGCTTGCACTCTTaGAGTAGCACAGCTACCACT +
Preference number: 4 (lower is better)
Translates to: DTDQFLLQIIGQNLCHGPTCLHS*SSTATT
Trigger: AGTGGTAGCTGTGCTACTGCAAGAGTGCAAGCAAGT...AGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAGTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp GATACTGATCAATTCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTACGGCTTGTTTGTACTaGCACTTTTCAGGCACGAAG +
Preference number: 4 (lower is better)
Translates to: DTDQFLLQIIGQNLCHGPTACLY*HFSGTK
Trigger: CTTCGTGCCTGAAAAGTGGCAGTACAAACAAGCCGT...AGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAGTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000505127.5
ENST00000650871.1
CDS-3UTR GCA 90 bp CATTTCTGTACAGCCAGGTACCCGTTGCTCCATTGTTGCTTATTAGACTGCTCAAGACCTTTGGCGACCTaGAGAAGTTTTCCAGAGACG +
Preference number: 4 (lower is better)
Translates to: HFCTARYPLLHCCLLDCSRPLAT*RSFPET
Trigger: CGTCTCTGGAAAACTTCTGCAGGTCGCCAAAGGTCT...TGAGCAGTCTAATAAGCAACAATGGAGCAACGGGTACCTGGCTGTACAGAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515330.5
CDS-3UTR GCA 90 bp TCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAATGTTGCTTATTAGACTaGTCAGAATATACTCTGCTT +
Preference number: 4 (lower is better)
Translates to: SSCKSLARTCVTALPKPQCCLLD*SEYTLL
Trigger: AAGCAGAGTATATTCTGAGCAGTCTAATAAGCAACA...TTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp GCAGGACTTAAAGTGATACTGATCAATTCCTCTTGCAAATCATTGGCCAGAACCCAGCTTGCAGGCTTCTaGAGCGGACAGCAAATGGTG +
Preference number: 4 (lower is better)
Translates to: AGLKVILINSSCKSLARTQLAGF*SGQQMV
Trigger: CACCATTTGCTGTCCGCTGCAGAAGCCTGCAAGCTG...GGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAGTATCACTTTAAGTCCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp TACCACATCCCCAGCTTTTGCAGAATCTGCCCTCTGATCTGTATACAGACCGACAGGACAATAAACACGTaGCACGGATATTCACAGCTG +
Preference number: 4 (lower is better)
Translates to: YHIPSFCRICPLICIQTDRTINT*HGYSQL
Trigger: CAGCTGTGAATATCCGTGGCACGTGTTTATTGTCCT...GTCGGTCTGTATACAGATCAGAGGGCAGATTCTGCAAAAGCTGGGGATGTGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509722.5
CDS-3UTR GCA 90 bp AAAATAATGGCCTCCAGCTCTATCCATGTCCCTGCAAAGGACATGATCTCATTCCCATGGAGCCTTCTGTaGACTGTGGTGAGACCGAAA +
Preference number: 4 (lower is better)
Translates to: KIMASSSIHVPAKDMISFPWSLL*TVVRPK
Trigger: TTTCGGTCTCACCACAGTGCACAGAAGGCTCCATGG...GAATGAGATCATGTCCTTTGCAGGGACATGGATAGAGCTGGAGGCCATTATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR GCA 90 bp GCAGGACTTAAAGTGATACTGATCAATTCCTCTTGCAAATCATTGGCCAGAACCACAGAGCTGACTTGCTaGATGGACCGTCCCTGTCTC +
Preference number: 4 (lower is better)
Translates to: AGLKVILINSSCKSLARTTELTC*MDRPCL
Trigger: GAGACAGGGACGGTCCATGCAGCAAGTCAGCTCTGT...GGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAGTATCACTTTAAGTCCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp ACTGTGGCAGAGGGAAAGAGGCTCTGCAGGATCTTGTGCTGCCAATTAAATGCACAAGGAGACTCGAAATaGATCAGAATGGGTCCAGTT +
Preference number: 4 (lower is better)
Translates to: TVAEGKRLCRILCCQLNAQGDSK*IRMGPV
Trigger: AACTGGACCCATTCTGATGCATTTCGAGTCTCCTTG...TGCATTTAATTGGCAGCACAAGATCCTGCAGAGCCTCTTTCCCTCTGCCACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp GCCAACAGCTTTTCAAAGTCATCAGGTTGCAAGGTGCGAGCCTCAAGGATCTCTCAAGGAGACTCGAAATaGATCAGAATGGGTCCAGTT +
Preference number: 4 (lower is better)
Translates to: ANSFSKSSGCKVRASRISQGDSK*IRMGPV
Trigger: AACTGGACCCATTCTGATGCATTTCGAGTCTCCTTG...AGAGATCCTTGAGGCTCGCACCTTGCAACCTGATGACTTTGAAAAGCTGTTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509722.5
CDS-3UTR GCA 90 bp CCTGAGGTCTCCCCAGCCATGTGGAACTGTGAGTTAATTAAACCTCTTTTCTTTAGCCGTGCCCATTTGTaGAGGGAACATCCATGCTGT +
Preference number: 4 (lower is better)
Translates to: PEVSPAMWNCELIKPLFFSRAHL*REHPCC
Trigger: ACAGCATGGATGTTCCCTGCACAAATGGGCACGGCT...AAAGAAAAGAGGTTTAATTAACTCACAGTTCCACATGGCTGGGGAGACCTCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR GCA 90 bp GATACTGATCAATTCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTAGCTGGAGTTCTGGCTaGAGTTTAGCATGTTTCCAG +
Preference number: 4 (lower is better)
Translates to: DTDQFLLQIIGQNLCHGPSWSSG*SLACFQ
Trigger: CTGGAAACATGCTAAACTGCAGCCAGAACTCCAGCT...AGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAGTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp GACTGTGCCGTATTCTATGTGCATGGTTTCTCCATTGAAGGTCTAGTCAAAGAAACATCAGTGAAGTGGTaGCAGAGCCCCTTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: DCAVFYVHGFSIEGLVKETSVKW*QSPFCS
Trigger: GGAGCAGAAGGGGCTCTGGCACCACTTCACTGATGT...TTCTTTGACTAGACCTTCAATGGAGAAACCATGCACATAGAATACGGCACAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505127.5
ENST00000509722.5
CDS-3UTR GCA 90 bp TTGTGTCCCCACCCAAATCTCATCTCGAATTGTAGTCCCATAATTCCCATGTGTTGTCACATAGTGCTGTaGGGTCATCTGTCGCTCCAC +
Preference number: 4 (lower is better)
Translates to: LCPHPNLISNCSPIIPMCCHIVL*GHLSLH
Trigger: GTGGAGCGACAGATGACCGCACAGCACTATGTGACA...ACACATGGGAATTATGGGACTACAATTCGAGATGAGATTTGGGTGGGGACACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CCA 90 bp GCAGGACTTAAAGTGATACTGATCAATTCCTCTTGCAAATCATTGGCCAGAACCAAAGCTCTGCAGCGCTaGTCCTCGCTCTTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: AGLKVILINSSCKSLARTKALQR*SSLLSS
Trigger: AGAGGACAAGAGCGAGGACCAGCGCTGCAGAGCTTT...GGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAGTATCACTTTAAGTCCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000505127.5
ENST00000650871.1
CDS-3UTR CCA 90 bp GATACTGATCAATTCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTATTTCCTTTGCCTCCTaGATCAGGGTCCTTAACTCG +
Preference number: 4 (lower is better)
Translates to: DTDQFLLQIIGQNLCHGPISFAS*IRVLNS
Trigger: CGAGTTAAGGACCCTGATCCAGGAGGCAAAGGAAAT...AGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAGTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000505127.5
ENST00000650871.1
CDS-3UTR CCA 90 bp TGGGGCTGTTTTCCATGTTGCTTTCCTTGCAGGACTTATGCCCAGAAGCAGCGGCCAAATATCCTACAATaGAGGCCCATATTAACTCTG +
Preference number: 4 (lower is better)
Translates to: WGCFPCCFPCRTYAQKQRPNILQ*RPILTL
Trigger: CAGAGTTAATATGGGCCTCCATTGTAGGATATTTGG...CCGCTGCTTCTGGGCATAAGTCCTGCAAGGAAAGCAACATGGAAAACAGCCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000650871.1
CDS-3UTR CCA 90 bp GAAGTGGTGCCAGAGCCCCTTCTGCTCCTTATAGTCTTTCCCAACATACCTCCCCCAAATATCCTACAATaGAGGCCCATATTAACTCTG +
Preference number: 4 (lower is better)
Translates to: EVVPEPLLLLIVFPNIPPPNILQ*RPILTL
Trigger: CAGAGTTAATATGGGCCTCCATTGTAGGATATTTGG...GGGAGGTATGTTGGGAAAGACTATAAGGAGCAGAAGGGGCTCTGGCACCACTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000505127.5
ENST00000509722.5
CDS-3UTR CCA 90 bp AAGCAGCGGTCTCCTGACCCATTCTTGATAACTGTGGCAGAGGGAAAGAGGCTCAATCGTTCTTGCTCATaGAAACAAAGATGTCTGCCA +
Preference number: 4 (lower is better)
Translates to: KQRSPDPFLITVAEGKRLNRSCS*KQRCLP
Trigger: TGGCAGACATCTTTGTTTCCATGAGCAAGAACGATT...GAGCCTCTTTCCCTCTGCCACAGTTATCAAGAATGGGTCAGGAGACCGCTGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000650871.1
CDS-3UTR CCA 90 bp AAGCAGCGGTCTCCTGACCCATTCTTGATAACTGTGGCAGAGGGAAAGAGGCTCAAATGTTCCTTCACCTaGGCAATCACAGACATAACT +
Preference number: 4 (lower is better)
Translates to: KQRSPDPFLITVAEGKRLKCSFT*AITDIT
Trigger: AGTTATGTCTGTGATTGCCCAGGTGAAGGAACATTT...GAGCCTCTTTCCCTCTGCCACAGTTATCAAGAATGGGTCAGGAGACCGCTGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CCA 90 bp AAAATAATGGCCTCCAGCTCTATCCATGTCCCTGCAAAGGACATGATCTCATTCAGTTGCTCCAAGCACTaGAAGTCTGGCTGCCACTCA +
Preference number: 4 (lower is better)
Translates to: KIMASSSIHVPAKDMISFSCSKH*KSGCHS
Trigger: TGAGTGGCAGCCAGACTTCCAGTGCTTGGAGCAACT...GAATGAGATCATGTCCTTTGCAGGGACATGGATAGAGCTGGAGGCCATTATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CCA 90 bp GCCCCTTCTGCTCCTTATAGTCTTTCCCAACATACCTCCCCAGAATTTCTTCTTGGGCATCTGTTGCTGTaGCTGATTTTGAGAAGGCTC +
Preference number: 4 (lower is better)
Translates to: APSAPYSLSQHTSPEFLLGHLLL*LILRRL
Trigger: GAGCCTTCTCAAAATCAGCCACAGCAACAGATGCCC...AAGAAGAAATTCTGGGGAGGTATGTTGGGAAAGACTATAAGGAGCAGAAGGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000509722.5
CDS-3UTR CCA 90 bp CCAGATGTTCTTTGCCAGGCTCTTTTCTGGCTGACCTGTCGTCAACGTGATAATGGCCAAGAAAATGCCTaGGGTATTATGAGGCGAGAA +
Preference number: 4 (lower is better)
Translates to: PDVLCQALFWLTCRQRDNGQENA*GIMRRE
Trigger: TTCTCGCCTCATAATACCCCAGGCATTTTCTTGGCC...ATTATCACGTTGACGACAGGTCAGCCAGAAAAGAGCCTGGCAAAGAACATCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509722.5
CDS-3UTR CCA 90 bp GATACTGATCAATTCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGTGTGCCCATATTCTTaGGCCTACCAGAATCAGAAG +
Preference number: 4 (lower is better)
Translates to: DTDQFLLQIIGQNLCHGPVCPYS*AYQNQK
Trigger: CTTCTGATTCTGGTAGGCCCAAGAATATGGGCACAC...AGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAGTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp CCAGATGTTCTTTGCCAGGCTCTTTTCTGGCTGACCTGTCGTCAACGTGATAATGTGTGCCCATATTCTTaGGCCTACCAGAATCAGAAG +
Preference number: 4 (lower is better)
Translates to: PDVLCQALFWLTCRQRDNVCPYS*AYQNQK
Trigger: CTTCTGATTCTGGTAGGCCCAAGAATATGGGCACAC...ATTATCACGTTGACGACAGGTCAGCCAGAAAAGAGCCTGGCAAAGAACATCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509722.5
CDS-3UTR CCA 90 bp GCAGAGGGAAAGAGGCTCTGCAGGATCTTGTGCTGCCAATTAAATGCAGGACTTAAGGCTTCTTCTTTTTaGACTGAAGGATGTGTGCCC +
Preference number: 4 (lower is better)
Translates to: AEGKRLCRILCCQLNAGLKASSF*TEGCVP
Trigger: GGGCACACATCCTTCAGTCCAAAAAGAAGAAGCCTT...AAGTCCTGCATTTAATTGGCAGCACAAGATCCTGCAGAGCCTCTTTCCCTCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp CCCTGCTGGCACTCATTCTCTCTCCTGCTACCCTATGAAGAGGTGCCTTCTGCCATCGCAGTTGGTTTCTaGAAACTCAACAATTATTTC +
Preference number: 4 (lower is better)
Translates to: PCWHSFSLLLPYEEVPSAIAVGF*KLNNYF
Trigger: GAAATAATTGTTGAGTTTCCAGAAACCAACTGCGAT...GGCAGAAGGCACCTCTTCATAGGGTAGCAGGAGAGAGAATGAGTGCCAGCAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CCA 90 bp GATTGTAAGTTTCCTGAGGTCTCCCCAGCCATGTGGAACTGTGAGTTAATTAAATCCACATCAGTGAAGTaGTGCCAGAGCCCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: DCKFPEVSPAMWNCELIKSTSVK*CQSPFC
Trigger: GCAGAAGGGGCTCTGGCACCACTTCACTGATGTGGA...TTTAATTAACTCACAGTTCCACATGGCTGGGGAGACCTCAGGAAACTTACAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CCA 90 bp CCCACTGTCCACCCTCTGATAAGCCCTGGTGTGTGTTGTTCCCTCTATGTGTCCGCTCTAAAATCTCAATaGCTTAAACAACACATGCCT +
Preference number: 4 (lower is better)
Translates to: PTVHPLISPGVCCSLYVSALKSQ*LKQHMP
Trigger: AGGCATGTGTTGTTTAAGCCATTGAGATTTTAGAGC...GGACACATAGAGGGAACAACACACACCAGGGCTTATCAGAGGGTGGACAGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CCA 90 bp CCCTGCTGGCACTCATTCTCTCTCCTGCTACCCTATGAAGAGGTGCCTTCTGCCACACATAGTGTTCCATaGTGTATATGTACCACATTT +
Preference number: 4 (lower is better)
Translates to: PCWHSFSLLLPYEEVPSATHSVP*CICTTF
Trigger: AAATGTGGTACATATACACCATGGAACACTATGTGT...GGCAGAAGGCACCTCTTCATAGGGTAGCAGGAGAGAGAATGAGTGCCAGCAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR TCA 90 bp GCAGGACTTAAAGTGATACTGATCAATTCCTCTTGCAAATCATTGGCCAGAACCGGATATTCACAGCTGTaGGCACGAAGAGCGGCGTAT +
Preference number: 4 (lower is better)
Translates to: AGLKVILINSSCKSLARTGYSQL*ARRAAY
Trigger: ATACGCCGCTCTTCGTGCTCACAGCTGTGAATATCC...GGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAGTATCACTTTAAGTCCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR TCA 90 bp TTGTGTCCCCACCCAAATCTCATCTCGAATTGTAGTCCCATAATTCCCATGTGTGACCGAAAGCAGCTTTaGCAAAGCTGTGAAGCTCCT +
Preference number: 4 (lower is better)
Translates to: LCPHPNLISNCSPIIPMCDRKQL*QSCEAP
Trigger: AGGAGCTTCACAGCTTTGTCAAAGCTGCTTTCGGTC...ACACATGGGAATTATGGGACTACAATTCGAGATGAGATTTGGGTGGGGACACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR TCA 90 bp GCAGGACTTAAAGTGATACTGATCAATTCCTCTTGCAAATCATTGGCCAGAACCAGAGCTTCTCTGTCCTaGCTTCTGGAGGAAGTGCTG +
Preference number: 4 (lower is better)
Translates to: AGLKVILINSSCKSLARTRASLS*LLEEVL
Trigger: CAGCACTTCCTCCAGAAGTCAGGACAGAGAAGCTCT...GGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAGTATCACTTTAAGTCCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR TCA 90 bp GATACTGATCAATTCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTACAGACATAACTTCTTaGGACAGAGCTTCTCTGTCC +
Preference number: 4 (lower is better)
Translates to: DTDQFLLQIIGQNLCHGPTDITS*DRASLS
Trigger: GGACAGAGAAGCTCTGTCTCAAGAAGTTATGTCTGT...AGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAGTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR TCA 90 bp ACTGTGGCAGAGGGAAAGAGGCTCTGCAGGATCTTGTGCTGCCAATTAAATGCACGAAGTATGGTGCTGTaGATAGGTGTCAAGGATTTT +
Preference number: 4 (lower is better)
Translates to: TVAEGKRLCRILCCQLNARSMVL*IGVKDF
Trigger: AAAATCCTTGACACCTATTCACAGCACCATACTTCG...TGCATTTAATTGGCAGCACAAGATCCTGCAGAGCCTCTTTCCCTCTGCCACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR TCA 90 bp GCAGAGGGAAAGAGGCTCTGCAGGATCTTGTGCTGCCAATTAAATGCAGGACTTCTGTTTTTAGAGCAGTaGTGCAGACTCCTGTTTTTG +
Preference number: 4 (lower is better)
Translates to: AEGKRLCRILCCQLNAGLLFLEQ*CRLLFL
Trigger: CAAAAACAGGAGTCTGCATCACTGCTCTAAAAACAG...AAGTCCTGCATTTAATTGGCAGCACAAGATCCTGCAGAGCCTCTTTCCCTCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR TCA 90 bp ACTGTGGCAGAGGGAAAGAGGCTCTGCAGGATCTTGTGCTGCCAATTAAATGCACTGTTTTTAGAGCAGTaGTGCAGACTCCTGTTTTTG +
Preference number: 4 (lower is better)
Translates to: TVAEGKRLCRILCCQLNALFLEQ*CRLLFL
Trigger: CAAAAACAGGAGTCTGCATCACTGCTCTAAAAACAG...TGCATTTAATTGGCAGCACAAGATCCTGCAGAGCCTCTTTCCCTCTGCCACAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR TCA 90 bp AAGTTTCCTGAGGTCTCCCCAGCCATGTGGAACTGTGAGTTAATTAAACCTCTTTCCTTCCTCCCCTTCTaGGTTCCCTCTGAACATTCT +
Preference number: 4 (lower is better)
Translates to: KFPEVSPAMWNCELIKPLSFLPF*VPSEHS
Trigger: AGAATGTTCAGAGGGAACTCAGAAGGGGAGGAAGGA...AAGAGGTTTAATTAACTCACAGTTCCACATGGCTGGGGAGACCTCAGGAAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR TCA 90 bp TTGTGTCCCCACCCAAATCTCATCTCGAATTGTAGTCCCATAATTCCCATGTGTAGGCTCTTTTCTGGCTaGCCTGTCGTCAACGTGATA +
Preference number: 4 (lower is better)
Translates to: LCPHPNLISNCSPIIPMCRLFSG*PVVNVI
Trigger: TATCACGTTGACGACAGGTCAGCCAGAAAAGAGCCT...ACACATGGGAATTATGGGACTACAATTCGAGATGAGATTTGGGTGGGGACACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR TCA 90 bp GCAGGACTTAAAGTGATACTGATCAATTCCTCTTGCAAATCATTGGCCAGAACCTCCCCTGCCTGTCTTTaGCATCGCAGTTGGTTTCTG +
Preference number: 4 (lower is better)
Translates to: AGLKVILINSSCKSLARTSPACL*HRSWFL
Trigger: CAGAAACCAACTGCGATGTCAAAGACAGGCAGGGGA...GGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAGTATCACTTTAAGTCCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR TCA 90 bp AAGTTTCCTGAGGTCTCCCCAGCCATGTGGAACTGTGAGTTAATTAAACCTCTTTTGTGCAGGACCCTGTaGAAGTCTAAGGGTGCATCT +
Preference number: 4 (lower is better)
Translates to: KFPEVSPAMWNCELIKPLLCRTL*KSKGAS
Trigger: AGATGCACCCTTAGACTTTCACAGGGTCCTGCACAA...AAGAGGTTTAATTAACTCACAGTTCCACATGGCTGGGGAGACCTCAGGAAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR TCA 90 bp AAAATAATGGCCTCCAGCTCTATCCATGTCCCTGCAAAGGACATGATCTCATTCCTGGAGTCAGGATTTTaGACAGGCCAATTAGGGGTG +
Preference number: 4 (lower is better)
Translates to: KIMASSSIHVPAKDMISFLESGF*TGQLGV
Trigger: CACCCCTAATTGGCCTGTTCAAAATCCTGACTCCAG...GAATGAGATCATGTCCTTTGCAGGGACATGGATAGAGCTGGAGGCCATTATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR TCA 90 bp CTTCACAGTCAAGTAGTCCCCCAAATAGACAATAGTTTCCTGGGCCGTCCACAGTGTAAGGCTCCACACTaGTACATCCCTTTATTGTCT +
Preference number: 4 (lower is better)
Translates to: LHSQVVPQIDNSFLGRPQCKAPH*YIPLLS
Trigger: AGACAATAAAGGGATGTATCAGTGTGGAGCCTTACA...CTGTGGACGGCCCAGGAAACTATTGTCTATTTGGGGGACTACTTGACTGTGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000505127.5
ENST00000509722.5
CDS-3UTR TCA 90 bp AAGCAGCGGTCTCCTGACCCATTCTTGATAACTGTGGCAGAGGGAAAGAGGCTCGACAGGAAAACAAATTaGATTCGTATCACAAAGGCT +
Preference number: 4 (lower is better)
Translates to: KQRSPDPFLITVAEGKRLDRKTN*IRITKA
Trigger: AGCCTTTGTGATACGAATTCAATTTGTTTTCCTGTC...GAGCCTCTTTCCCTCTGCCACAGTTATCAAGAATGGGTCAGGAGACCGCTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000650871.1
CDS-3UTR GCA 90 bp TCATTTCTGTACAGCCAGGTACCCGTTGCTCCATTGTTGCTTATTAGACTGCTCACTTGCTTGCACTCTTaGAGTAGCACAGCTACCACT +
Preference number: 4 (lower is better)
Translates to: SFLYSQVPVAPLLLIRLLTCLHS*SSTATT
Trigger: AGTGGTAGCTGTGCTACTGCAAGAGTGCAAGCAAGT...GAGCAGTCTAATAAGCAACAATGGAGCAACGGGTACCTGGCTGTACAGAAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515330.5
CDS-3UTR GCA 90 bp AAAGCAGCAACCAAATGCCACACAATTAGCTTTGAACATGCACTTAACAATTACAGGGACGCCAGTAACTaGTGCAACCCGGCGCCAATC +
Preference number: 4 (lower is better)
Translates to: KAATKCHTISFEHALNNYRDASN*CNPAPI
Trigger: GATTGGCGCCGGGTTGCAGCAGTTACTGGCGTCCCT...GTAATTGTTAAGTGCATGTTCAAAGCTAATTGTGTGGCATTTGGTTGCTGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515330.5
CDS-3UTR GCA 90 bp TTGTGTCCCCACCCAAATCTCATCTCGAATTGTAGTCCCATAATTCCCATGTGTAGACCTTTGGCGACCTaGAGAAGTTTTCCAGAGACG +
Preference number: 4 (lower is better)
Translates to: LCPHPNLISNCSPIIPMCRPLAT*RSFPET
Trigger: CGTCTCTGGAAAACTTCTGCAGGTCGCCAAAGGTCT...ACACATGGGAATTATGGGACTACAATTCGAGATGAGATTTGGGTGGGGACACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR GCA 90 bp ACTGTGGCAGAGGGAAAGAGGCTCTGCAGGATCTTGTGCTGCCAATTAAATGCACCGTTGCTCCATTGTTaGTTATTAGACTGCTCAGAA +
Preference number: 4 (lower is better)
Translates to: TVAEGKRLCRILCCQLNAPLLHC*LLDCSE
Trigger: TTCTGAGCAGTCTAATAAGCAACAATGGAGCAACGG...TGCATTTAATTGGCAGCACAAGATCCTGCAGAGCCTCTTTCCCTCTGCCACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp TTAAATGCAGGACTTAAAGTGATACTGATCAATTCCTCTTGCAAATCATTGGCCAGGCAGCTGCCAGCTTaGAGGCTTCTGCAGCGGACA +
Preference number: 4 (lower is better)
Translates to: LNAGLKVILINSSCKSLARQLPA*RLLQRT
Trigger: TGTCCGCTGCAGAAGCCTGCAAGCTGGCAGCTGCCT...GGCCAATGATTTGCAAGAGGAATTGATCAGTATCACTTTAAGTCCTGCATTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp AAGCAGCGGTCTCCTGACCCATTCTTGATAACTGTGGCAGAGGGAAAGAGGCTCTTTTGGAAATCCCCTTaGCCATGCAAGATAAGTTTA +
Preference number: 4 (lower is better)
Translates to: KQRSPDPFLITVAEGKRLFWKSP*PCKISL
Trigger: TAAACTTATCTTGCATGGGCAAGGGGATTTCCAAAA...GAGCCTCTTTCCCTCTGCCACAGTTATCAAGAATGGGTCAGGAGACCGCTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000650871.1
CDS-3UTR GCA 90 bp GCAGGACTTAAAGTGATACTGATCAATTCCTCTTGCAAATCATTGGCCAGAACCGCGGCTGTCTCAGAATaGACAGTCTATGAGAGCCGT +
Preference number: 4 (lower is better)
Translates to: AGLKVILINSSCKSLARTAAVSE*TVYESR
Trigger: ACGGCTCTCATAGACTGTGCATTCTGAGACAGCCGC...GGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAGTATCACTTTAAGTCCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp CCTGAGGTCTCCCCAGCCATGTGGAACTGTGAGTTAATTAAACCTCTTTTCTTTCATCAGGTTGCAAGGTaGGAGCCTCAAGGATCTCTT +
Preference number: 4 (lower is better)
Translates to: PEVSPAMWNCELIKPLFFHQVAR*EPQGSL
Trigger: AAGAGATCCTTGAGGCTCGCACCTTGCAACCTGATG...AAAGAAAAGAGGTTTAATTAACTCACAGTTCCACATGGCTGGGGAGACCTCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR GCA 90 bp AAAATAATGGCCTCCAGCTCTATCCATGTCCCTGCAAAGGACATGATCTCATTCTCAAAGTCATCAGGTTaGAAGGTGCGAGCCTCAAGG +
Preference number: 4 (lower is better)
Translates to: KIMASSSIHVPAKDMISFSKSSG*KVRASR
Trigger: CCTTGAGGCTCGCACCTTGCAACCTGATGACTTTGA...GAATGAGATCATGTCCTTTGCAGGGACATGGATAGAGCTGGAGGCCATTATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR GCA 90 bp GACTGTGCCGTATTCTATGTGCATGGTTTCTCCATTGAAGGTCTAGTCAAAGAATGTCACATAGTGCTGTaGGGTCATCTGTCGCTCCAC +
Preference number: 4 (lower is better)
Translates to: DCAVFYVHGFSIEGLVKECHIVL*GHLSLH
Trigger: GTGGAGCGACAGATGACCGCACAGCACTATGTGACA...TTCTTTGACTAGACCTTCAATGGAGAAACCATGCACATAGAATACGGCACAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505127.5
ENST00000509722.5
CDS-3UTR GCA 90 bp GCAGGACTTAAAGTGATACTGATCAATTCCTCTTGCAAATCATTGGCCAGAACCTGTCACATAGTGCTGTaGGGTCATCTGTCGCTCCAC +
Preference number: 4 (lower is better)
Translates to: AGLKVILINSSCKSLARTCHIVL*GHLSLH
Trigger: GTGGAGCGACAGATGACCGCACAGCACTATGTGACA...GGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAGTATCACTTTAAGTCCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp GCAGAGGGAAAGAGGCTCTGCAGGATCTTGTGCTGCCAATTAAATGCAGGACTTCTGATCAATTCCTCTTaGAAATCATTGGCCAGAACC +
Preference number: 4 (lower is better)
Translates to: AEGKRLCRILCCQLNAGLLINSS*KSLART
Trigger: GGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAG...AAGTCCTGCATTTAATTGGCAGCACAAGATCCTGCAGAGCCTCTTTCCCTCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp CATTTCTGTACAGCCAGGTACCCGTTGCTCCATTGTTGCTTATTAGACTGCTCAATTTCCTTTGCCTCCTaGATCAGGGTCCTTAACTCG +
Preference number: 4 (lower is better)
Translates to: HFCTARYPLLHCCLLDCSISFAS*IRVLNS
Trigger: CGAGTTAAGGACCCTGATCCAGGAGGCAAAGGAAAT...TGAGCAGTCTAATAAGCAACAATGGAGCAACGGGTACCTGGCTGTACAGAAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515330.5
CDS-3UTR CCA 90 bp CATTTCTGTACAGCCAGGTACCCGTTGCTCCATTGTTGCTTATTAGACTGCTCAGTTTGTTTTGTCCTCTaGGCCCACGGCTTGTTTGTA +
Preference number: 4 (lower is better)
Translates to: HFCTARYPLLHCCLLDCSVCFVL*AHGLFV
Trigger: TACAAACAAGCCGTGGGCCCAGAGGACAAAACAAAC...TGAGCAGTCTAATAAGCAACAATGGAGCAACGGGTACCTGGCTGTACAGAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515330.5
CDS-3UTR CCA 90 bp TCATTTCTGTACAGCCAGGTACCCGTTGCTCCATTGTTGCTTATTAGACTGCTCACTTGTGGAGACCTTTaGCGACCTGCAGAAGTTTTC +
Preference number: 4 (lower is better)
Translates to: SFLYSQVPVAPLLLIRLLTCGDL*RPAEVF
Trigger: GAAAACTTCTGCAGGTCGCCAAAGGTCTCCACAAGT...GAGCAGTCTAATAAGCAACAATGGAGCAACGGGTACCTGGCTGTACAGAAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515330.5
CDS-3UTR CCA 90 bp TATTGTGGATGGGATGTAGAATATCTGGGTGGGAATGTTTTGTTCATAGAGTCTGGCAATTGGCGTGGCTaGCTGCAACTTGTGGAGACC +
Preference number: 4 (lower is better)
Translates to: YCGWDVEYLGGNVLFIESGNWRG*LQLVET
Trigger: GGTCTCCACAAGTTGCAGCCAGCCACGCCAATTGCC...AGACTCTATGAACAAAACATTCCCACCCAGATATTCTACATCCCATCCACAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505127.5
ENST00000509722.5
CDS-3UTR CCA 90 bp AAAGCAGCAACCAAATGCCACACAATTAGCTTTGAACATGCACTTAACAATTACGCGGGGCAATTGGCGTaGCTGGCTGCAACTTGTGGA +
Preference number: 4 (lower is better)
Translates to: KAATKCHTISFEHALNNYAGQLA*LAATCG
Trigger: TCCACAAGTTGCAGCCAGCCACGCCAATTGCCCCGC...GTAATTGTTAAGTGCATGTTCAAAGCTAATTGTGTGGCATTTGGTTGCTGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515330.5
CDS-3UTR CCA 90 bp GCAGGACTTAAAGTGATACTGATCAATTCCTCTTGCAAATCATTGGCCAGAACCGCAGCGGACAGCAAATaGTGGTCAAACTCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: AGLKVILINSSCKSLARTAADSK*WSNSFS
Trigger: GCTGAAGGAGTTTGACCACCATTTGCTGTCCGCTGC...GGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAGTATCACTTTAAGTCCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp ACTGTGGCAGAGGGAAAGAGGCTCTGCAGGATCTTGTGCTGCCAATTAAATGCATCTCAAAGGCCTCTTTaGCTTCACACAGATGTAAGT +
Preference number: 4 (lower is better)
Translates to: TVAEGKRLCRILCCQLNASQRPL*LHTDVS
Trigger: ACTTACATCTGTGTGAAGCCAAAGAGGCCTTTGAGA...TGCATTTAATTGGCAGCACAAGATCCTGCAGAGCCTCTTTCCCTCTGCCACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp TGTAGTCCGATGGCTCAGTCTCAGTCTCCACATCTTGATCCAAGGAGACTCGAATCTCAAAGGCCTCTTTaGCTTCACACAGATGTAAGT +
Preference number: 4 (lower is better)
Translates to: CSPMAQSQSPHLDPRRLESQRPL*LHTDVS
Trigger: ACTTACATCTGTGTGAAGCCAAAGAGGCCTTTGAGA...TTCGAGTCTCCTTGGATCAAGATGTGGAGACTGAGACTGAGCCATCGGACTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509722.5
CDS-3UTR CCA 90 bp GATTGTAAGTTTCCTGAGGTCTCCCCAGCCATGTGGAACTGTGAGTTAATTAAACCTCAGACAAGGCAGTaGAACACTGAGTGTCCACCA +
Preference number: 4 (lower is better)
Translates to: DCKFPEVSPAMWNCELIKPQTRQ*NTECPP
Trigger: TGGTGGACACTCAGTGTTCCACTGCCTTGTCTGAGG...TTTAATTAACTCACAGTTCCACATGGCTGGGGAGACCTCAGGAAACTTACAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CCA 90 bp AAGTTTCCTGAGGTCTCCCCAGCCATGTGGAACTGTGAGTTAATTAAACCTCTTGGGCATCTGTTGCTGTaGCTGATTTTGAGAAGGCTC +
Preference number: 4 (lower is better)
Translates to: KFPEVSPAMWNCELIKPLGHLLL*LILRRL
Trigger: GAGCCTTCTCAAAATCAGCCACAGCAACAGATGCCC...AAGAGGTTTAATTAACTCACAGTTCCACATGGCTGGGGAGACCTCAGGAAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CCA 90 bp GCAGAGGGAAAGAGGCTCTGCAGGATCTTGTGCTGCCAATTAAATGCAGGACTTATATTTCTGACTTCCTaGATACCTTCTGGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: AEGKRLCRILCCQLNAGLIFLTS*IPSGAP
Trigger: AGGAGCTCCAGAAGGTATCCAGGAAGTCAGAAATAT...AAGTCCTGCATTTAATTGGCAGCACAAGATCCTGCAGAGCCTCTTTCCCTCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp TGTAGTCCGATGGCTCAGTCTCAGTCTCCACATCTTGATCCAAGGAGACTCGAAAGCTACATGGCAGCATaGAAATGTTTCCCAGAGAAT +
Preference number: 4 (lower is better)
Translates to: CSPMAQSQSPHLDPRRLESYMAA*KCFPEN
Trigger: ATTCTCTGGGAAACATTTCCATGCTGCCATGTAGCT...TTCGAGTCTCCTTGGATCAAGATGTGGAGACTGAGACTGAGCCATCGGACTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509722.5
CDS-3UTR CCA 90 bp AAGCAGCGGTCTCCTGACCCATTCTTGATAACTGTGGCAGAGGGAAAGAGGCTCCCAAGCCATATTCTGTaGCTTTGTATTCTGTTTTCA +
Preference number: 4 (lower is better)
Translates to: KQRSPDPFLITVAEGKRLPSHIL*LCILFS
Trigger: TGAAAACAGAATACAAAGCCACAGAATATGGCTTGG...GAGCCTCTTTCCCTCTGCCACAGTTATCAAGAATGGGTCAGGAGACCGCTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000650871.1
CDS-3UTR CCA 90 bp AAGCAGCGGTCTCCTGACCCATTCTTGATAACTGTGGCAGAGGGAAAGAGGCTCGTCAAAGAAAGACGATaGCAGATTTCATTACATTCC +
Preference number: 4 (lower is better)
Translates to: KQRSPDPFLITVAEGKRLVKERR*QISLHS
Trigger: GGAATGTAATGAAATCTGCCATCGTCTTTCTTTGAC...GAGCCTCTTTCCCTCTGCCACAGTTATCAAGAATGGGTCAGGAGACCGCTGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000650871.1
CDS-3UTR CCA 90 bp GCAGGACTTAAAGTGATACTGATCAATTCCTCTTGCAAATCATTGGCCAGAACCTGGCATTTCCCCTGCTaGCACTCATTCTCTCTCCTG +
Preference number: 4 (lower is better)
Translates to: AGLKVILINSSCKSLARTWHFPC*HSFSLL
Trigger: CAGGAGAGAGAATGAGTGCCAGCAGGGGAAATGCCA...GGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAGTATCACTTTAAGTCCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
3UTR CAA 72 bp TTCAGGGGTACATGTGCAGGTTTGTGTCATGGGGGTTaGTTGTGCGAATTACTTCATCACCCAGGTATTCAG +
Preference number: 4 (lower is better)
Translates to: FRGTCAGLCHGG*LCELLHHPGIQ
Trigger: CTGAATACCTGGGTGATGAAGTAATTCGCACAACAAACCCCCATGACACAAACCTGCACATGTACCCCTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
3UTR CAA 72 bp ATGTTCCTTCACCTGGGCAATCACAGACATAACTTCTaGAGACAGAGCTTCTCTGTCCTGACTTCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: MFLHLGNHRHNF*RQSFSVLTSGG
Trigger: TCCTCCAGAAGTCAGGACAGAGAAGCTCTGTCTCAAGAAGTTATGTCTGTGATTGCCCAGGTGAAGGAACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509722.5
CDS-3UTR TCA 90 bp AAGTTTCCTGAGGTCTCCCCAGCCATGTGGAACTGTGAGTTAATTAAACCTCTTCCCTTTTTATCCGGCTaGGGAAGTGCCAAATATCCT +
Preference number: 4 (lower is better)
Translates to: KFPEVSPAMWNCELIKPLPFLSG*GSAKYP
Trigger: AGGATATTTGGCACTTCCTCAGCCGGATAAAAAGGG...AAGAGGTTTAATTAACTCACAGTTCCACATGGCTGGGGAGACCTCAGGAAACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR TCA 90 bp CCTGAGGTCTCCCCAGCCATGTGGAACTGTGAGTTAATTAAACCTCTTTTCTTTCCCTTTTTATCCGGCTaGGGAAGTGCCAAATATCCT +
Preference number: 4 (lower is better)
Translates to: PEVSPAMWNCELIKPLFFPFLSG*GSAKYP
Trigger: AGGATATTTGGCACTTCCTCAGCCGGATAAAAAGGG...AAAGAAAAGAGGTTTAATTAACTCACAGTTCCACATGGCTGGGGAGACCTCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR TCA 90 bp GCAGGACTTAAAGTGATACTGATCAATTCCTCTTGCAAATCATTGGCCAGAACCCATCATCTCTCTTGGTaGGGAGGCCAATCTCAAAGG +
Preference number: 4 (lower is better)
Translates to: AGLKVILINSSCKSLARTHHLSW*GGQSQR
Trigger: CCTTTGAGATTGGCCTCCTCACCAAGAGAGATGATG...GGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAGTATCACTTTAAGTCCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR TCA 90 bp CCAGATGTTCTTTGCCAGGCTCTTTTCTGGCTGACCTGTCGTCAACGTGATAATCGAAGTATGGTGCTGTaGATAGGTGTCAAGGATTTT +
Preference number: 4 (lower is better)
Translates to: PDVLCQALFWLTCRQRDNRSMVL*IGVKDF
Trigger: AAAATCCTTGACACCTATTCACAGCACCATACTTCG...ATTATCACGTTGACGACAGGTCAGCCAGAAAAGAGCCTGGCAAAGAACATCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509722.5
CDS-3UTR TCA 90 bp GATTGTAAGTTTCCTGAGGTCTCCCCAGCCATGTGGAACTGTGAGTTAATTAAATCCTTCCTCCCCTTCTaGGTTCCCTCTGAACATTCT +
Preference number: 4 (lower is better)
Translates to: DCKFPEVSPAMWNCELIKSFLPF*VPSEHS
Trigger: AGAATGTTCAGAGGGAACTCAGAAGGGGAGGAAGGA...TTTAATTAACTCACAGTTCCACATGGCTGGGGAGACCTCAGGAAACTTACAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR TCA 90 bp TTCATAGAGTCTCTTGTTAAATTCTGTCACATAGTGCTGTGCGGTCATCTGTCGTCCTTCCTCCCCTTCTaGGTTCCCTCTGAACATTCT +
Preference number: 4 (lower is better)
Translates to: FIESLVKFCHIVLCGHLSSFLPF*VPSEHS
Trigger: AGAATGTTCAGAGGGAACTCAGAAGGGGAGGAAGGA...CGACAGATGACCGCACAGCACTATGTGACAGAATTTAACAAGAGACTCTATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509722.5
CDS-3UTR TCA 90 bp GCAGGACTTAAAGTGATACTGATCAATTCCTCTTGCAAATCATTGGCCAGAACCAGGCTCTTTTCTGGCTaGCCTGTCGTCAACGTGATA +
Preference number: 4 (lower is better)
Translates to: AGLKVILINSSCKSLARTRLFSG*PVVNVI
Trigger: TATCACGTTGACGACAGGTCAGCCAGAAAAGAGCCT...GGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAGTATCACTTTAAGTCCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR TCA 90 bp CAAGGATCTCTTTCCTCATCTTTCCCGGCAATGAAACCCAAGAACTCCCACTGGTTCTTCTTTTTGGACTaGAGGATGTGTGCCCATATT +
Preference number: 4 (lower is better)
Translates to: QGSLSSSFPAMKPKNSHWFFFLD*RMCAHI
Trigger: AATATGGGCACACATCCTTCAGTCCAAAAAGAAGAA...CCAGTGGGAGTTCTTGGGTTTCATTGCCGGGAAAGATGAGGAAAGAGATCCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509722.5
CDS-3UTR TCA 90 bp GCAGGACTTAAAGTGATACTGATCAATTCCTCTTGCAAATCATTGGCCAGAACCCTGGAGTCAGGATTTTaGACAGGCCAATTAGGGGTG +
Preference number: 4 (lower is better)
Translates to: AGLKVILINSSCKSLARTLESGF*TGQLGV
Trigger: CACCCCTAATTGGCCTGTTCAAAATCCTGACTCCAG...GGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAGTATCACTTTAAGTCCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR TCA 90 bp GATACTGATCAATTCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTTGTAAGGCTCCACACTaGTACATCCCTTTATTGTCT +
Preference number: 4 (lower is better)
Translates to: DTDQFLLQIIGQNLCHGPCKAPH*YIPLLS
Trigger: AGACAATAAAGGGATGTATCAGTGTGGAGCCTTACA...AGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAGTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR TCA 90 bp GATTGTAAGTTTCCTGAGGTCTCCCCAGCCATGTGGAACTGTGAGTTAATTAAAAATAAAGGAGCCCCTTaGAGGCCGAAGTACCCAAAG +
Preference number: 4 (lower is better)
Translates to: DCKFPEVSPAMWNCELIKNKGAP*RPKYPK
Trigger: CTTTGGGTACTTCGGCCTTCAAGGGGCTCCTTTATT...TTTAATTAACTCACAGTTCCACATGGCTGGGGAGACCTCAGGAAACTTACAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000650871.1
CDS-3UTR TCA 90 bp TGGCTTTATAAGCATCTGGCATTTCCCCTGCTGGCACTCATTCTCTCTCCTGCTTCTCGTGAGAGTGAATaGATTCTCACAAGATCTGAT +
Preference number: 4 (lower is better)
Translates to: WLYKHLAFPLLALILSPASRESE*ILTRSD
Trigger: ATCAGATCTTGTGAGAATTCATTCACTCTCACGAGA...AGCAGGAGAGAGAATGAGTGCCAGCAGGGGAAATGCCAGATGCTTATAAAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR TCA 90 bp TTGTGTCCCCACCCAAATCTCATCTCGAATTGTAGTCCCATAATTCCCATGTGTCTGGTAGGAGGTAATTaGGGCAGTTTTTCCCATGCT +
Preference number: 4 (lower is better)
Translates to: LCPHPNLISNCSPIIPMCLVGGN*GSFSHA
Trigger: AGCATGGGAAAAACTGCCTCAATTACCTCCTACCAG...ACACATGGGAATTATGGGACTACAATTCGAGATGAGATTTGGGTGGGGACACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR TCA 90 bp TGGCTTTATAAGCATCTGGCATTTCCCCTGCTGGCACTCATTCTCTCTCCTGCTGCTCTCACCTATAAGTaGGAACAAGTGGTATTTAGT +
Preference number: 4 (lower is better)
Translates to: WLYKHLAFPLLALILSPAALTYK*EQVVFS
Trigger: ACTAAATACCACTTGTTCTCACTTATAGGTGAGAGC...AGCAGGAGAGAGAATGAGTGCCAGCAGGGGAAATGCCAGATGCTTATAAAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR GCA 90 bp AAAGCAGCAACCAAATGCCACACAATTAGCTTTGAACATGCACTTAACAATTACTGGGGAGTAAAGCTCTaGAGCGCTGGTCCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: KAATKCHTISFEHALNNYWGVKL*SAGPRS
Trigger: AGAGCGAGGACCAGCGCTGCAGAGCTTTACTCCCCA...GTAATTGTTAAGTGCATGTTCAAAGCTAATTGTGTGGCATTTGGTTGCTGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515330.5
CDS-3UTR GCA 90 bp TTCATAGAGTCTCTTGTTAAATTCTGTCACATAGTGCTGTGCGGTCATCTGTCGAGACCTTTGGCGACCTaGAGAAGTTTTCCAGAGACG +
Preference number: 4 (lower is better)
Translates to: FIESLVKFCHIVLCGHLSRPLAT*RSFPET
Trigger: CGTCTCTGGAAAACTTCTGCAGGTCGCCAAAGGTCT...CGACAGATGACCGCACAGCACTATGTGACAGAATTTAACAAGAGACTCTATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505127.5
ENST00000509722.5
CDS-3UTR GCA 90 bp AAGCAGCGGTCTCCTGACCCATTCTTGATAACTGTGGCAGAGGGAAAGAGGCTCTGTTGCTTATTAGACTaGTCAGAATATACTCTGCTT +
Preference number: 4 (lower is better)
Translates to: KQRSPDPFLITVAEGKRLCCLLD*SEYTLL
Trigger: AAGCAGAGTATATTCTGAGCAGTCTAATAAGCAACA...GAGCCTCTTTCCCTCTGCCACAGTTATCAAGAATGGGTCAGGAGACCGCTGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000650871.1
CDS-3UTR GCA 90 bp TACCACATCCCCAGCTTTTGCAGAATCTGCCCTCTGATCTGTATACAGACCGACAAATCCCCTTGCCCATaGAAGATAAGTTTATCCAAC +
Preference number: 4 (lower is better)
Translates to: YHIPSFCRICPLICIQTDKSPCP*KISLSN
Trigger: GTTGGATAAACTTATCTTGCATGGGCAAGGGGATTT...GTCGGTCTGTATACAGATCAGAGGGCAGATTCTGCAAAAGCTGGGGATGTGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000509722.5
CDS-3UTR GCA 90 bp TATTGTGGATGGGATGTAGAATATCTGGGTGGGAATGTTTTGTTCATAGAGTCTCCCTGCTCTTTCCCCTaGCTGTCTTTGACATCGCAG +
Preference number: 4 (lower is better)
Translates to: YCGWDVEYLGGNVLFIESPCSFP*LSLTSQ
Trigger: CTGCGATGTCAAAGACAGGCAGGGGAAAGAGCAGGG...AGACTCTATGAACAAAACATTCCCACCCAGATATTCTACATCCCATCCACAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509722.5
CDS-3UTR GCA 90 bp TGGCTTTATAAGCATCTGGCATTTCCCCTGCTGGCACTCATTCTCTCTCCTGCTTTTAAATGTAGGGCCTaGGCCTCTTTCACTAATTTC +
Preference number: 4 (lower is better)
Translates to: WLYKHLAFPLLALILSPAFKCRA*ASFTNF
Trigger: GAAATTAGTGAAAGAGGCGCAGGCCCTACATTTAAA...AGCAGGAGAGAGAATGAGTGCCAGCAGGGGAAATGCCAGATGCTTATAAAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR GCA 90 bp AAATCAGTAGTATTGTGGATGGGATGTAGAATATCTGGGTGGGAATGTTTTGTTGTCGATGCCCTGCTCTaGGACTGGGCCACCACTTTT +
Preference number: 4 (lower is better)
Translates to: KSVVLWMGCRISGWECFVVDALL*DWATTF
Trigger: AAAAGTGGTGGCCCAGTCGCAGAGCAGGGCATCGAC...AACAAAACATTCCCACCCAGATATTCTACATCCCATCCACAATACTACTGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509722.5
CDS-3UTR GCA 90 bp GACTGTGCCGTATTCTATGTGCATGGTTTCTCCATTGAAGGTCTAGTCAAAGAATCAAAGTCATCAGGTTaGAAGGTGCGAGCCTCAAGG +
Preference number: 4 (lower is better)
Translates to: DCAVFYVHGFSIEGLVKESKSSG*KVRASR
Trigger: CCTTGAGGCTCGCACCTTGCAACCTGATGACTTTGA...TTCTTTGACTAGACCTTCAATGGAGAAACCATGCACATAGAATACGGCACAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509722.5
CDS-3UTR GCA 90 bp GATACTGATCAATTCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTTGCAGGATCTTGTGCTaGCAATTAAATGCAGGACTT +
Preference number: 4 (lower is better)
Translates to: DTDQFLLQIIGQNLCHGPCRILC*QLNAGL
Trigger: AAGTCCTGCATTTAATTGGCAGCACAAGATCCTGCA...AGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAGTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp AGTCAAGTAGTCCCCCAAATAGACAATAGTTTCCTGGGCCGTCCACAGTTCAGAGGCTGTTTTCCATGTTaGTTTCCTTGCAGGACTTAT +
Preference number: 4 (lower is better)
Translates to: SQVVPQIDNSFLGRPQFRGCFPC*FPCRTY
Trigger: ATAAGTCCTGCAAGGAAAGCAACATGGAAAACAGCC...TCTGAACTGTGGACGGCCCAGGAAACTATTGTCTATTTGGGGGACTACTTGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505127.5
CDS-3UTR CCA 90 bp GATGTAGAATATCTGGGTGGGAATGTTTTGTTCATAGAGTCTCTTGTTAAATTCCACCTGCGGGGCAATTaGCGTGGCTGGCTGCAACTT +
Preference number: 4 (lower is better)
Translates to: DVEYLGGNVLFIESLVKFHLRGN*RGWLQL
Trigger: AAGTTGCAGCCAGCCACGCCAATTGCCCCGCAGGTG...GAATTTAACAAGAGACTCTATGAACAAAACATTCCCACCCAGATATTCTACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505127.5
ENST00000509722.5
CDS-3UTR CCA 90 bp CTAAAATCAGTAGTATTGTGGATGGGATGTAGAATATCTGGGTGGGAATGTTTTACGGAGATTCGGGCTTaGCGAATAACCACCTGCGGG +
Preference number: 4 (lower is better)
Translates to: LKSVVLWMGCRISGWECFTEIRA*RITTCG
Trigger: CCCGCAGGTGGTTATTCGCCAAGCCCGAATCTCCGT...AAAACATTCCCACCCAGATATTCTACATCCCATCCACAATACTACTGATTTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505127.5
ENST00000509722.5
CDS-3UTR CCA 90 bp GCAGAGGGAAAGAGGCTCTGCAGGATCTTGTGCTGCCAATTAAATGCAGGACTTCCAAATATCCTACAATaGAGGCCCATATTAACTCTG +
Preference number: 4 (lower is better)
Translates to: AEGKRLCRILCCQLNAGLPNILQ*RPILTL
Trigger: CAGAGTTAATATGGGCCTCCATTGTAGGATATTTGG...AAGTCCTGCATTTAATTGGCAGCACAAGATCCTGCAGAGCCTCTTTCCCTCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp GCAGGACTTAAAGTGATACTGATCAATTCCTCTTGCAAATCATTGGCCAGAACCGTATACCTAGCGACGTaGAGAGGCCCTTTTTATCCG +
Preference number: 4 (lower is better)
Translates to: AGLKVILINSSCKSLARTVYLAT*RGPFYP
Trigger: CGGATAAAAAGGGCCTCTCCACGTCGCTAGGTATAC...GGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAGTATCACTTTAAGTCCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp GCAGAGGGAAAGAGGCTCTGCAGGATCTTGTGCTGCCAATTAAATGCAGGACTTAATCGTTCTTGCTCATaGAAACAAAGATGTCTGCCA +
Preference number: 4 (lower is better)
Translates to: AEGKRLCRILCCQLNAGLNRSCS*KQRCLP
Trigger: TGGCAGACATCTTTGTTTCCATGAGCAAGAACGATT...AAGTCCTGCATTTAATTGGCAGCACAAGATCCTGCAGAGCCTCTTTCCCTCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp TTAAATGCAGGACTTAAAGTGATACTGATCAATTCCTCTTGCAAATCATTGGCCGTCCCTGTCTCCCCATaGAGCCTTCTGTGCACTGTG +
Preference number: 4 (lower is better)
Translates to: LNAGLKVILINSSCKSLAVPVSP*SLLCTV
Trigger: CACAGTGCACAGAAGGCTCCATGGGGAGACAGGGAC...GGCCAATGATTTGCAAGAGGAATTGATCAGTATCACTTTAAGTCCTGCATTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp GCAGAGGGAAAGAGGCTCTGCAGGATCTTGTGCTGCCAATTAAATGCAGGACTTAAATGTTCCTTCACCTaGGCAATCACAGACATAACT +
Preference number: 4 (lower is better)
Translates to: AEGKRLCRILCCQLNAGLKCSFT*AITDIT
Trigger: AGTTATGTCTGTGATTGCCCAGGTGAAGGAACATTT...AAGTCCTGCATTTAATTGGCAGCACAAGATCCTGCAGAGCCTCTTTCCCTCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp CTTCACAGTCAAGTAGTCCCCCAAATAGACAATAGTTTCCTGGGCCGTCCACAGAAATGTTCCTTCACCTaGGCAATCACAGACATAACT +
Preference number: 4 (lower is better)
Translates to: LHSQVVPQIDNSFLGRPQKCSFT*AITDIT
Trigger: AGTTATGTCTGTGATTGCCCAGGTGAAGGAACATTT...CTGTGGACGGCCCAGGAAACTATTGTCTATTTGGGGGACTACTTGACTGTGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509722.5
CDS-3UTR CCA 90 bp GCAGGACTTAAAGTGATACTGATCAATTCCTCTTGCAAATCATTGGCCAGAACCATTGCTGTAGTCCGATaGCTCAGTCTCAGTCTCCAC +
Preference number: 4 (lower is better)
Translates to: AGLKVILINSSCKSLARTIAVVR*LSLSLH
Trigger: GTGGAGACTGAGACTGAGCCATCGGACTACAGCAAT...GGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAGTATCACTTTAAGTCCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp GCAGAGGGAAAGAGGCTCTGCAGGATCTTGTGCTGCCAATTAAATGCAGGACTTCCAAATTGTCATTGTTaGGTTCCTGAAGAGAGAGAT +
Preference number: 4 (lower is better)
Translates to: AEGKRLCRILCCQLNAGLPNCHC*VPEERD
Trigger: ATCTCTCTCTTCAGGAACCCAACAATGACAATTTGG...AAGTCCTGCATTTAATTGGCAGCACAAGATCCTGCAGAGCCTCTTTCCCTCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp AAAATAATGGCCTCCAGCTCTATCCATGTCCCTGCAAAGGACATGATCTCATTCGGCCAAGAAAATGCCTaGGGTATTATGAGGCGAGAA +
Preference number: 4 (lower is better)
Translates to: KIMASSSIHVPAKDMISFGQENA*GIMRRE
Trigger: TTCTCGCCTCATAATACCCCAGGCATTTTCTTGGCC...GAATGAGATCATGTCCTTTGCAGGGACATGGATAGAGCTGGAGGCCATTATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CCA 90 bp GATACTGATCAATTCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTATATTTCTGACTTCCTaGATACCTTCTGGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: DTDQFLLQIIGQNLCHGPIFLTS*IPSGAP
Trigger: AGGAGCTCCAGAAGGTATCCAGGAAGTCAGAAATAT...AGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAGTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp CCAGATGTTCTTTGCCAGGCTCTTTTCTGGCTGACCTGTCGTCAACGTGATAATAACGATATGAGGGTCTaGAGTGAGCAGAAGTATTTC +
Preference number: 4 (lower is better)
Translates to: PDVLCQALFWLTCRQRDNNDMRV*SEQKYF
Trigger: GAAATACTTCTGCTCACTCCAGACCCTCATATCGTT...ATTATCACGTTGACGACAGGTCAGCCAGAAAAGAGCCTGGCAAAGAACATCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509722.5
CDS-3UTR CCA 90 bp CCTGAGGTCTCCCCAGCCATGTGGAACTGTGAGTTAATTAAACCTCTTTTCTTTGGTGAAGGAGCTACATaGCAGCATGGAAATGTTTCC +
Preference number: 4 (lower is better)
Translates to: PEVSPAMWNCELIKPLFFGEGAT*QHGNVS
Trigger: GGAAACATTTCCATGCTGCCATGTAGCTCCTTCACC...AAAGAAAAGAGGTTTAATTAACTCACAGTTCCACATGGCTGGGGAGACCTCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CCA 90 bp TTAAATGCAGGACTTAAAGTGATACTGATCAATTCCTCTTGCAAATCATTGGCCCGCTTACAGAGGAATTaGGGGTCTCCGCCCTCTGAC +
Preference number: 4 (lower is better)
Translates to: LNAGLKVILINSSCKSLARLQRN*GSPPSD
Trigger: GTCAGAGGGCGGAGACCCCCAATTCCTCTGTAAGCG...GGCCAATGATTTGCAAGAGGAATTGATCAGTATCACTTTAAGTCCTGCATTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp CCTGAGGTCTCCCCAGCCATGTGGAACTGTGAGTTAATTAAACCTCTTTTCTTTACACTGAGGATGAGCTaGAGTTCTGGCTGCAGTTTA +
Preference number: 4 (lower is better)
Translates to: PEVSPAMWNCELIKPLFFTLRMS*SSGCSL
Trigger: TAAACTGCAGCCAGAACTCCAGCTCATCCTCAGTGT...AAAGAAAAGAGGTTTAATTAACTCACAGTTCCACATGGCTGGGGAGACCTCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CCA 90 bp AAGTTTCCTGAGGTCTCCCCAGCCATGTGGAACTGTGAGTTAATTAAACCTCTTACACTGAGGATGAGCTaGAGTTCTGGCTGCAGTTTA +
Preference number: 4 (lower is better)
Translates to: KFPEVSPAMWNCELIKPLTLRMS*SSGCSL
Trigger: TAAACTGCAGCCAGAACTCCAGCTCATCCTCAGTGT...AAGAGGTTTAATTAACTCACAGTTCCACATGGCTGGGGAGACCTCAGGAAACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CCA 90 bp TTCATAGAGTCTCTTGTTAAATTCTGTCACATAGTGCTGTGCGGTCATCTGTCGCCTCTTGCAAATCATTaGCCAGAACCTGTGTCACGG +
Preference number: 4 (lower is better)
Translates to: FIESLVKFCHIVLCGHLSPLANH*PEPVSR
Trigger: CCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGG...CGACAGATGACCGCACAGCACTATGTGACAGAATTTAACAAGAGACTCTATGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505127.5
ENST00000509722.5
CDS-3UTR CCA 90 bp GCAGGACTTAAAGTGATACTGATCAATTCCTCTTGCAAATCATTGGCCAGAACCGATAAGATTCCTCTCTaGCCCCTCTCCTTTGCTGCA +
Preference number: 4 (lower is better)
Translates to: AGLKVILINSSCKSLARTDKIPL*PLSFAA
Trigger: TGCAGCAAAGGAGAGGGGCCAGAGAGGAATCTTATC...GGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAGTATCACTTTAAGTCCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458497.6
CDS-3UTR CCA 90 bp AAGCAGCGGTCTCCTGACCCATTCTTGATAACTGTGGCAGAGGGAAAGAGGCTCACACATAGTGTTCCATaGTGTATATGTACCACATTT +
Preference number: 4 (lower is better)
Translates to: KQRSPDPFLITVAEGKRLTHSVP*CICTTF
Trigger: AAATGTGGTACATATACACCATGGAACACTATGTGT...GAGCCTCTTTCCCTCTGCCACAGTTATCAAGAATGGGTCAGGAGACCGCTGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CCA 90 bp GATTGTAAGTTTCCTGAGGTCTCCCCAGCCATGTGGAACTGTGAGTTAATTAAAGGCTTTATAAGCATCTaGCATTTCCCCTGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: DCKFPEVSPAMWNCELIKGFISI*HFPCWH
Trigger: GTGCCAGCAGGGGAAATGCCAGATGCTTATAAAGCC...TTTAATTAACTCACAGTTCCACATGGCTGGGGAGACCTCAGGAAACTTACAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR TCA 90 bp GCAGGACTTAAAGTGATACTGATCAATTCCTCTTGCAAATCATTGGCCAGAACCCCCTTTTTATCCGGCTaGGGAAGTGCCAAATATCCT +
Preference number: 4 (lower is better)
Translates to: AGLKVILINSSCKSLARTPFLSG*GSAKYP
Trigger: AGGATATTTGGCACTTCCTCAGCCGGATAAAAAGGG...GGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAGTATCACTTTAAGTCCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR TCA 90 bp CCTGAGGTCTCCCCAGCCATGTGGAACTGTGAGTTAATTAAACCTCTTTTCTTTCTTCTGAGTTCCCTCTaGACATTCTTACCCATTAGG +
Preference number: 4 (lower is better)
Translates to: PEVSPAMWNCELIKPLFFLLSSL*TFLPIR
Trigger: CCTAATGGGTAAGAATGTTCAGAGGGAACTCAGAAG...AAAGAAAAGAGGTTTAATTAACTCACAGTTCCACATGGCTGGGGAGACCTCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR TCA 90 bp GATTGTAAGTTTCCTGAGGTCTCCCCAGCCATGTGGAACTGTGAGTTAATTAAACACTCAGAGACTTGTTaGAAACAGCTCCCTCACCAT +
Preference number: 4 (lower is better)
Translates to: DCKFPEVSPAMWNCELIKHSETC*KQLPHH
Trigger: ATGGTGAGGGAGCTGTTTTCAACAAGTCTCTGAGTG...TTTAATTAACTCACAGTTCCACATGGCTGGGGAGACCTCAGGAAACTTACAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR GCA 90 bp CAACCAAATGCCACACAATTAGCTTTGAACATGCACTTAACAATTACAAGTTGTGACGCCAGTAACTGCTaGAACCCGGCGCCAATCACA +
Preference number: 4 (lower is better)
Translates to: QPNATQLALNMHLTITSCDASNC*NPAPIT
Trigger: TGTGATTGGCGCCGGGTTGCAGCAGTTACTGGCGTC...ACAACTTGTAATTGTTAAGTGCATGTTCAAAGCTAATTGTGTGGCATTTGGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515330.5
CDS-3UTR GCA 90 bp CAACCAAATGCCACACAATTAGCTTTGAACATGCACTTAACAATTACAAGTTGTTGGCGAATAACCACCTaGGGGGCAATTGGCGTGGCT +
Preference number: 4 (lower is better)
Translates to: QPNATQLALNMHLTITSCWRITT*GAIGVA
Trigger: AGCCACGCCAATTGCCCCGCAGGTGGTTATTCGCCA...ACAACTTGTAATTGTTAAGTGCATGTTCAAAGCTAATTGTGTGGCATTTGGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515330.5
CDS-3UTR GCA 90 bp TTGTGTCCCCACCCAAATCTCATCTCGAATTGTAGTCCCATAATTCCCATGTGTAGGACAATAAACACGTaGCACGGATATTCACAGCTG +
Preference number: 4 (lower is better)
Translates to: LCPHPNLISNCSPIIPMCRTINT*HGYSQL
Trigger: CAGCTGTGAATATCCGTGGCACGTGTTTATTGTCCT...ACACATGGGAATTATGGGACTACAATTCGAGATGAGATTTGGGTGGGGACACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR GCA 90 bp TTAAATGCAGGACTTAAAGTGATACTGATCAATTCCTCTTGCAAATCATTGGCCACATCAGTGAAGTGGTaGCAGAGCCCCTTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: LNAGLKVILINSSCKSLATSVKW*QSPFCS
Trigger: GGAGCAGAAGGGGCTCTGGCACCACTTCACTGATGT...GGCCAATGATTTGCAAGAGGAATTGATCAGTATCACTTTAAGTCCTGCATTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp AAATCAGTAGTATTGTGGATGGGATGTAGAATATCTGGGTGGGAATGTTTTGTTACATCAGTGAAGTGGTaGCAGAGCCCCTTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: KSVVLWMGCRISGWECFVTSVKW*QSPFCS
Trigger: GGAGCAGAAGGGGCTCTGGCACCACTTCACTGATGT...AACAAAACATTCCCACCCAGATATTCTACATCCCATCCACAATACTACTGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505127.5
ENST00000509722.5
CDS-3UTR GCA 90 bp GCAGGACTTAAAGTGATACTGATCAATTCCTCTTGCAAATCATTGGCCAGAACCCCATGTTGCTTTCCTTaGAGGACTTATGCCCAGAAG +
Preference number: 4 (lower is better)
Translates to: AGLKVILINSSCKSLARTPCCFP*RTYAQK
Trigger: CTTCTGGGCATAAGTCCTGCAAGGAAAGCAACATGG...GGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAGTATCACTTTAAGTCCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000650871.1
CDS-3UTR GCA 90 bp GATTGTAAGTTTCCTGAGGTCTCCCCAGCCATGTGGAACTGTGAGTTAATTAAACCATGTTGCTTTCCTTaGAGGACTTATGCCCAGAAG +
Preference number: 4 (lower is better)
Translates to: DCKFPEVSPAMWNCELIKPCCFP*RTYAQK
Trigger: CTTCTGGGCATAAGTCCTGCAAGGAAAGCAACATGG...TTTAATTAACTCACAGTTCCACATGGCTGGGGAGACCTCAGGAAACTTACAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR GCA 90 bp CCTGAGGTCTCCCCAGCCATGTGGAACTGTGAGTTAATTAAACCTCTTTTCTTTTGCCTTTCTCAAGAGTaGTTTTCATCCCTCATGGGT +
Preference number: 4 (lower is better)
Translates to: PEVSPAMWNCELIKPLFFCLSQE*FSSLMG
Trigger: ACCCATGAGGGATGAAAAGCACTCTTGAGAAAGGCA...AAAGAAAAGAGGTTTAATTAACTCACAGTTCCACATGGCTGGGGAGACCTCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CCA 90 bp TTAAATGCAGGACTTAAAGTGATACTGATCAATTCCTCTTGCAAATCATTGGCCAAAGCTCTGCAGCGCTaGTCCTCGCTCTTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: LNAGLKVILINSSCKSLAKALQR*SSLLSS
Trigger: AGAGGACAAGAGCGAGGACCAGCGCTGCAGAGCTTT...GGCCAATGATTTGCAAGAGGAATTGATCAGTATCACTTTAAGTCCTGCATTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000505127.5
ENST00000650871.1
CDS-3UTR CCA 90 bp GCAGGACTTAAAGTGATACTGATCAATTCCTCTTGCAAATCATTGGCCAGAACCGTTTGTTTTGTCCTCTaGGCCCACGGCTTGTTTGTA +
Preference number: 4 (lower is better)
Translates to: AGLKVILINSSCKSLARTVCFVL*AHGLFV
Trigger: TACAAACAAGCCGTGGGCCCAGAGGACAAAACAAAC...GGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAGTATCACTTTAAGTCCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000505127.5
ENST00000650871.1
CDS-3UTR CCA 90 bp GCAGGACTTAAAGTGATACTGATCAATTCCTCTTGCAAATCATTGGCCAGAACCACTTGTGGAGACCTTTaGCGACCTGCAGAAGTTTTC +
Preference number: 4 (lower is better)
Translates to: AGLKVILINSSCKSLARTTCGDL*RPAEVF
Trigger: GAAAACTTCTGCAGGTCGCCAAAGGTCTCCACAAGT...GGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAGTATCACTTTAAGTCCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp GATGTAGAATATCTGGGTGGGAATGTTTTGTTCATAGAGTCTCTTGTTAAATTCGCTGGCTGCAACTTGTaGAGACCTTTGGCGACCTGC +
Preference number: 4 (lower is better)
Translates to: DVEYLGGNVLFIESLVKFAGCNL*RPLATC
Trigger: GCAGGTCGCCAAAGGTCTCCACAAGTTGCAGCCAGC...GAATTTAACAAGAGACTCTATGAACAAAACATTCCCACCCAGATATTCTACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505127.5
ENST00000509722.5
CDS-3UTR CCA 90 bp CAACCAAATGCCACACAATTAGCTTTGAACATGCACTTAACAATTACAAGTTGTGCTGGCTGCAACTTGTaGAGACCTTTGGCGACCTGC +
Preference number: 4 (lower is better)
Translates to: QPNATQLALNMHLTITSCAGCNL*RPLATC
Trigger: GCAGGTCGCCAAAGGTCTCCACAAGTTGCAGCCAGC...ACAACTTGTAATTGTTAAGTGCATGTTCAAAGCTAATTGTGTGGCATTTGGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515330.5
CDS-3UTR CCA 90 bp ACTGTGGCAGAGGGAAAGAGGCTCTGCAGGATCTTGTGCTGCCAATTAAATGCAGTCTCTTTGACAATGTaGCTTTTCTTGAGTAGTACT +
Preference number: 4 (lower is better)
Translates to: TVAEGKRLCRILCCQLNAVSLTM*LFLSST
Trigger: AGTACTACTCAAGAAAAGCCACATTGTCAAAGAGAC...TGCATTTAATTGGCAGCACAAGATCCTGCAGAGCCTCTTTCCCTCTGCCACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp CCTGAGGTCTCCCCAGCCATGTGGAACTGTGAGTTAATTAAACCTCTTTTCTTTAAGGCTTCTTCTTTTTaGACTGAAGGATGTGTGCCC +
Preference number: 4 (lower is better)
Translates to: PEVSPAMWNCELIKPLFFKASSF*TEGCVP
Trigger: GGGCACACATCCTTCAGTCCAAAAAGAAGAAGCCTT...AAAGAAAAGAGGTTTAATTAACTCACAGTTCCACATGGCTGGGGAGACCTCAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CCA 90 bp GCAGGACTTAAAGTGATACTGATCAATTCCTCTTGCAAATCATTGGCCAGAACCGGTGAAGGAGCTACATaGCAGCATGGAAATGTTTCC +
Preference number: 4 (lower is better)
Translates to: AGLKVILINSSCKSLARTGEGAT*QHGNVS
Trigger: GGAAACATTTCCATGCTGCCATGTAGCTCCTTCACC...GGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAGTATCACTTTAAGTCCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp AAGTTTCCTGAGGTCTCCCCAGCCATGTGGAACTGTGAGTTAATTAAACCTCTTGATGAGCTGGAGTTCTaGCTGCAGTTTAGCATGTTT +
Preference number: 4 (lower is better)
Translates to: KFPEVSPAMWNCELIKPLDELEF*LQFSMF
Trigger: AAACATGCTAAACTGCAGCCAGAACTCCAGCTCATC...AAGAGGTTTAATTAACTCACAGTTCCACATGGCTGGGGAGACCTCAGGAAACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CCA 90 bp TTGTGTCCCCACCCAAATCTCATCTCGAATTGTAGTCCCATAATTCCCATGTGTGATGAGCTGGAGTTCTaGCTGCAGTTTAGCATGTTT +
Preference number: 4 (lower is better)
Translates to: LCPHPNLISNCSPIIPMCDELEF*LQFSMF
Trigger: AAACATGCTAAACTGCAGCCAGAACTCCAGCTCATC...ACACATGGGAATTATGGGACTACAATTCGAGATGAGATTTGGGTGGGGACACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CCA 90 bp GCAGAGGGAAAGAGGCTCTGCAGGATCTTGTGCTGCCAATTAAATGCAGGACTTGCTCTAAAATCTCAATaGCTTAAACAACACATGCCT +
Preference number: 4 (lower is better)
Translates to: AEGKRLCRILCCQLNAGLALKSQ*LKQHMP
Trigger: AGGCATGTGTTGTTTAAGCCATTGAGATTTTAGAGC...AAGTCCTGCATTTAATTGGCAGCACAAGATCCTGCAGAGCCTCTTTCCCTCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000650871.1
3UTR CAA 72 bp ATAACTGTGGCAGAGGGAAAGAGGCTCTGCAGGATCTaGTGCTGCCAATTAAATGCAGGACTTAAAGTGATA +
Preference number: 4 (lower is better)
Translates to: ITVAEGKRLCRI*CCQLNAGLKVI
Trigger: TATCACTTTAAGTCCTGCATTTAATTGGCAGCACAAGATCCTGCAGAGCCTCTTTCCCTCTGCCACAGTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
3UTR CAA 72 bp TCTCTCTTGGTGAGGAGGCCAATCTCAAAGGCCTCTTaGGCTTCACACAGATGTAAGTTTTTCAATTCTGGA +
Preference number: 4 (lower is better)
Translates to: SLLVRRPISKAS*ASHRCKFFNSG
Trigger: TCCAGAATTGAAAAACTTACATCTGTGTGAAGCCAAAGAGGCCTTTGAGATTGGCCTCCTCACCAAGAGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509722.5
3UTR CAA 72 bp TCTTCTTTTTGGACTGAAGGATGTGTGCCCATATTCTaGGGCCTACCAGAATCAGAAGACCAAGAAGCAGAA +
Preference number: 4 (lower is better)
Translates to: SSFWTEGCVPIF*GLPESEDQEAE
Trigger: TTCTGCTTCTTGGTCTTCTGATTCTGGTAGGCCCAAGAATATGGGCACACATCCTTCAGTCCAAAAAGAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509722.5
CDS-3UTR TCA 90 bp CCTGAGGTCTCCCCAGCCATGTGGAACTGTGAGTTAATTAAACCTCTTTTCTTTCGAAGTATGGTGCTGTaGATAGGTGTCAAGGATTTT +
Preference number: 4 (lower is better)
Translates to: PEVSPAMWNCELIKPLFFRSMVL*IGVKDF
Trigger: AAAATCCTTGACACCTATTCACAGCACCATACTTCG...AAAGAAAAGAGGTTTAATTAACTCACAGTTCCACATGGCTGGGGAGACCTCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR TCA 90 bp TTGTGTCCCCACCCAAATCTCATCTCGAATTGTAGTCCCATAATTCCCATGTGTCTGTTTTTAGAGCAGTaGTGCAGACTCCTGTTTTTG +
Preference number: 4 (lower is better)
Translates to: LCPHPNLISNCSPIIPMCLFLEQ*CRLLFL
Trigger: CAAAAACAGGAGTCTGCATCACTGCTCTAAAAACAG...ACACATGGGAATTATGGGACTACAATTCGAGATGAGATTTGGGTGGGGACACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR TCA 90 bp TTAAATGCAGGACTTAAAGTGATACTGATCAATTCCTCTTGCAAATCATTGGCCTCCCCTGCCTGTCTTTaGCATCGCAGTTGGTTTCTG +
Preference number: 4 (lower is better)
Translates to: LNAGLKVILINSSCKSLASPACL*HRSWFL
Trigger: CAGAAACCAACTGCGATGTCAAAGACAGGCAGGGGA...GGCCAATGATTTGCAAGAGGAATTGATCAGTATCACTTTAAGTCCTGCATTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR TCA 90 bp GCAGGACTTAAAGTGATACTGATCAATTCCTCTTGCAAATCATTGGCCAGAACCGTATTCTCTAGTCTCTaGAACAGCCAATCATGCCTC +
Preference number: 4 (lower is better)
Translates to: AGLKVILINSSCKSLARTVFSSL*NSQSCL
Trigger: GAGGCATGATTGGCTGTTTCAGAGACTAGAGAATAC...GGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAGTATCACTTTAAGTCCTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp AAAGCAGCAACCAAATGCCACACAATTAGCTTTGAACATGCACTTAACAATTACATTGGCGTGGCTGGCTaGAACTTGTGGAGACCTTTG +
Preference number: 4 (lower is better)
Translates to: KAATKCHTISFEHALNNYIGVAG*NLWRPL
Trigger: CAAAGGTCTCCACAAGTTGCAGCCAGCCACGCCAAT...GTAATTGTTAAGTGCATGTTCAAAGCTAATTGTGTGGCATTTGGTTGCTGCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515330.5
CDS-3UTR GCA 90 bp TTAAATGCAGGACTTAAAGTGATACTGATCAATTCCTCTTGCAAATCATTGGCCATTGGCGTGGCTGGCTaGAACTTGTGGAGACCTTTG +
Preference number: 4 (lower is better)
Translates to: LNAGLKVILINSSCKSLAIGVAG*NLWRPL
Trigger: CAAAGGTCTCCACAAGTTGCAGCCAGCCACGCCAAT...GGCCAATGATTTGCAAGAGGAATTGATCAGTATCACTTTAAGTCCTGCATTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp GCAGAGGGAAAGAGGCTCTGCAGGATCTTGTGCTGCCAATTAAATGCAGGACTTTGTTGCTTATTAGACTaGTCAGAATATACTCTGCTT +
Preference number: 4 (lower is better)
Translates to: AEGKRLCRILCCQLNAGLCCLLD*SEYTLL
Trigger: AAGCAGAGTATATTCTGAGCAGTCTAATAAGCAACA...AAGTCCTGCATTTAATTGGCAGCACAAGATCCTGCAGAGCCTCTTTCCCTCTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp TGGCTTTATAAGCATCTGGCATTTCCCCTGCTGGCACTCATTCTCTCTCCTGCTTGTTGCTTATTAGACTaGTCAGAATATACTCTGCTT +
Preference number: 4 (lower is better)
Translates to: WLYKHLAFPLLALILSPACCLLD*SEYTLL
Trigger: AAGCAGAGTATATTCTGAGCAGTCTAATAAGCAACA...AGCAGGAGAGAGAATGAGTGCCAGCAGGGGAAATGCCAGATGCTTATAAAGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR GCA 90 bp CATAAGAAAAATGGCCATAGGCCAAGCCATATTCTGTGGCTTTGTATTCTGTTTCATCAGGTTGCAAGGTaGGAGCCTCAAGGATCTCTT +
Preference number: 4 (lower is better)
Translates to: HKKNGHRPSHILWLCILFHQVAR*EPQGSL
Trigger: AAGAGATCCTTGAGGCTCGCACCTTGCAACCTGATG...AAACAGAATACAAAGCCACAGAATATGGCTTGGCCTATGGCCATTTTTCTTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509722.5
CDS-3UTR GCA 90 bp TTAAATGCAGGACTTAAAGTGATACTGATCAATTCCTCTTGCAAATCATTGGCCGAGGGAAAGAGGCTCTaGAGGATCTTGTGCTGCCAA +
Preference number: 4 (lower is better)
Translates to: LNAGLKVILINSSCKSLAEGKRL*RILCCQ
Trigger: TTGGCAGCACAAGATCCTGCAGAGCCTCTTTCCCTC...GGCCAATGATTTGCAAGAGGAATTGATCAGTATCACTTTAAGTCCTGCATTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp CCTGAGGTCTCCCCAGCCATGTGGAACTGTGAGTTAATTAAACCTCTTTTCTTTGGCTGTTTTCCATGTTaGTTTCCTTGCAGGACTTAT +
Preference number: 4 (lower is better)
Translates to: PEVSPAMWNCELIKPLFFGCFPC*FPCRTY
Trigger: ATAAGTCCTGCAAGGAAAGCAACATGGAAAACAGCC...AAAGAAAAGAGGTTTAATTAACTCACAGTTCCACATGGCTGGGGAGACCTCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR GCA 90 bp TCATTTCTGTACAGCCAGGTACCCGTTGCTCCATTGTTGCTTATTAGACTGCTCCTAAGACTGATATATTaGAGCAGGAACTGTAACCTC +
Preference number: 4 (lower is better)
Translates to: SFLYSQVPVAPLLLIRLLLRLIY*SRNCNL
Trigger: GAGGTTACAGTTCCTGCTGCAATATATCAGTCTTAG...GAGCAGTCTAATAAGCAACAATGGAGCAACGGGTACCTGGCTGTACAGAAATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515330.5
CDS-3UTR CCA 90 bp TTAAATGCAGGACTTAAAGTGATACTGATCAATTCCTCTTGCAAATCATTGGCCCTCTTCCGACACATCTaGCGCTTCCAACAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: LNAGLKVILINSSCKSLALFRHI*RFQQEL
Trigger: CAGCTCTTGTTGGAAGCGCCAGATGTGTCGGAAGAG...GGCCAATGATTTGCAAGAGGAATTGATCAGTATCACTTTAAGTCCTGCATTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp TTAAATGCAGGACTTAAAGTGATACTGATCAATTCCTCTTGCAAATCATTGGCCGCGGACAGCAAATGGTaGTCAAACTCCTTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: LNAGLKVILINSSCKSLAADSKW*SNSFSR
Trigger: CCTGCTGAAGGAGTTTGACCACCATTTGCTGTCCGC...GGCCAATGATTTGCAAGAGGAATTGATCAGTATCACTTTAAGTCCTGCATTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR TCA 90 bp CCTGAGGTCTCCCCAGCCATGTGGAACTGTGAGTTAATTAAACCTCTTTTCTTTCAATGTGGCTTTTCTTaGGTAGTACTCACAGTATCT +
Preference number: 4 (lower is better)
Translates to: PEVSPAMWNCELIKPLFFQCGFS*VVLTVS
Trigger: AGATACTGTGAGTACTACTCAAGAAAAGCCACATTG...AAAGAAAAGAGGTTTAATTAACTCACAGTTCCACATGGCTGGGGAGACCTCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR TCA 90 bp CATAAGAAAAATGGCCATAGGCCAAGCCATATTCTGTGGCTTTGTATTCTGTTTCACTCAGAGACTTGTTaGAAACAGCTCCCTCACCAT +
Preference number: 4 (lower is better)
Translates to: HKKNGHRPSHILWLCILFHSETC*KQLPHH
Trigger: ATGGTGAGGGAGCTGTTTTCAACAAGTCTCTGAGTG...AAACAGAATACAAAGCCACAGAATATGGCTTGGCCTATGGCCATTTTTCTTATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509722.5
CDS-3UTR TCA 90 bp TTAAATGCAGGACTTAAAGTGATACTGATCAATTCCTCTTGCAAATCATTGGCCAGGCTCTTTTCTGGCTaGCCTGTCGTCAACGTGATA +
Preference number: 4 (lower is better)
Translates to: LNAGLKVILINSSCKSLARLFSG*PVVNVI
Trigger: TATCACGTTGACGACAGGTCAGCCAGAAAAGAGCCT...GGCCAATGATTTGCAAGAGGAATTGATCAGTATCACTTTAAGTCCTGCATTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR TCA 90 bp TTAAATGCAGGACTTAAAGTGATACTGATCAATTCCTCTTGCAAATCATTGGCCAGAAGCAGAACGATATaGGGGTCTGGAGTGAGCAGA +
Preference number: 4 (lower is better)
Translates to: LNAGLKVILINSSCKSLARSRTI*GSGVSR
Trigger: TCTGCTCACTCCAGACCCTCATATCGTTCTGCTTCT...GGCCAATGATTTGCAAGAGGAATTGATCAGTATCACTTTAAGTCCTGCATTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR TCA 90 bp AAAATAATGGCCTCCAGCTCTATCCATGTCCCTGCAAAGGACATGATCTCATTCTTCTTCTTTTTGGACTaGAGGATGTGTGCCCATATT +
Preference number: 4 (lower is better)
Translates to: KIMASSSIHVPAKDMISFFFFLD*RMCAHI
Trigger: AATATGGGCACACATCCTTCAGTCCAAAAAGAAGAA...GAATGAGATCATGTCCTTTGCAGGGACATGGATAGAGCTGGAGGCCATTATTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR TCA 90 bp GATTGTAAGTTTCCTGAGGTCTCCCCAGCCATGTGGAACTGTGAGTTAATTAAAGCATGGTTTCTCCATTaGAGGTCTAGTCAAAGAAAG +
Preference number: 4 (lower is better)
Translates to: DCKFPEVSPAMWNCELIKAWFLH*RSSQRK
Trigger: CTTTCTTTGACTAGACCTTCAATGGAGAAACCATGC...TTTAATTAACTCACAGTTCCACATGGCTGGGGAGACCTCAGGAAACTTACAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR TCA 90 bp AAAATAATGGCCTCCAGCTCTATCCATGTCCCTGCAAAGGACATGATCTCATTCCTCTTCATAGCAGTGTaGGAGTGGATTAATACACAT +
Preference number: 4 (lower is better)
Translates to: KIMASSSIHVPAKDMISFLFIAV*EWINTH
Trigger: ATGTGTATTAATCCACTCTCACACTGCTATGAAGAG...GAATGAGATCATGTCCTTTGCAGGGACATGGATAGAGCTGGAGGCCATTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR TCA 90 bp TTGTGTCCCCACCCAAATCTCATCTCGAATTGTAGTCCCATAATTCCCATGTGTGCTCTCACCTATAAGTaGGAACAAGTGGTATTTAGT +
Preference number: 4 (lower is better)
Translates to: LCPHPNLISNCSPIIPMCALTYK*EQVVFS
Trigger: ACTAAATACCACTTGTTCTCACTTATAGGTGAGAGC...ACACATGGGAATTATGGGACTACAATTCGAGATGAGATTTGGGTGGGGACACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR GCA 90 bp CATAAGAAAAATGGCCATAGGCCAAGCCATATTCTGTGGCTTTGTATTCTGTTTACGGCTTGTTTGTACTaGCACTTTTCAGGCACGAAG +
Preference number: 4 (lower is better)
Translates to: HKKNGHRPSHILWLCILFTACLY*HFSGTK
Trigger: CTTCGTGCCTGAAAAGTGGCAGTACAAACAAGCCGT...AAACAGAATACAAAGCCACAGAATATGGCTTGGCCTATGGCCATTTTTCTTATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505127.5
CDS-3UTR GCA 90 bp TTAAATGCAGGACTTAAAGTGATACTGATCAATTCCTCTTGCAAATCATTGGCCCATCAGGTTGCAAGGTaGGAGCCTCAAGGATCTCTT +
Preference number: 4 (lower is better)
Translates to: LNAGLKVILINSSCKSLAHQVAR*EPQGSL
Trigger: AAGAGATCCTTGAGGCTCGCACCTTGCAACCTGATG...GGCCAATGATTTGCAAGAGGAATTGATCAGTATCACTTTAAGTCCTGCATTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp TTAAATGCAGGACTTAAAGTGATACTGATCAATTCCTCTTGCAAATCATTGGCCCAAAAGAGCACTATGTaGTCGGTGGAGTTGACTGGG +
Preference number: 4 (lower is better)
Translates to: LNAGLKVILINSSCKSLAQKSTM*SVELTG
Trigger: CCCAGTCAACTCCACCGAGCACATAGTGCTCTTTTG...GGCCAATGATTTGCAAGAGGAATTGATCAGTATCACTTTAAGTCCTGCATTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp GCAGGACTTAAAGTGATACTGATCAATTCCTCTTGCAAATCATTGGCCAGAACCCTGATCAATTCCTCTTaGAAATCATTGGCCAGAACC +
Preference number: 4 (lower is better)
Translates to: AGLKVILINSSCKSLARTLINSS*KSLART
Trigger: GGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAG...GGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAGTATCACTTTAAGTCCTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp TTAAATGCAGGACTTAAAGTGATACTGATCAATTCCTCTTGCAAATCATTGGCCATCTGGCATTTCCCCTaGTGGCACTCATTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: LNAGLKVILINSSCKSLAIWHFP*WHSFSL
Trigger: GAGAGAGAATGAGTGCCAGCAGGGGAAATGCCAGAT...GGCCAATGATTTGCAAGAGGAATTGATCAGTATCACTTTAAGTCCTGCATTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR GCA 90 bp CATTTCTGTACAGCCAGGTACCCGTTGCTCCATTGTTGCTTATTAGACTGCTCAAAAGCAGCAACCAAATaGCACACAATTAGCTTTGAA +
Preference number: 4 (lower is better)
Translates to: HFCTARYPLLHCCLLDCSKAATK*HTISFE
Trigger: TTCAAAGCTAATTGTGTGGCATTTGGTTGCTGCTTT...TGAGCAGTCTAATAAGCAACAATGGAGCAACGGGTACCTGGCTGTACAGAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515330.5
CDS-3UTR CCA 90 bp CATAAGAAAAATGGCCATAGGCCAAGCCATATTCTGTGGCTTTGTATTCTGTTTATGATTACGATGAATTaGGTGTCCCTGGGTCTAGGG +
Preference number: 4 (lower is better)
Translates to: HKKNGHRPSHILWLCILFMITMN*VSLGLG
Trigger: CCCTAGACCCAGGGACACCCAATTCATCGTAATCAT...AAACAGAATACAAAGCCACAGAATATGGCTTGGCCTATGGCCATTTTTCTTATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000505127.5
ENST00000509722.5
CDS-3UTR CCA 90 bp GCAGGACTTAAAGTGATACTGATCAATTCCTCTTGCAAATCATTGGCCAGAACCTCTCAAAGGCCTCTTTaGCTTCACACAGATGTAAGT +
Preference number: 4 (lower is better)
Translates to: AGLKVILINSSCKSLARTSQRPL*LHTDVS
Trigger: ACTTACATCTGTGTGAAGCCAAAGAGGCCTTTGAGA...GGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAGTATCACTTTAAGTCCTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp TTAAATGCAGGACTTAAAGTGATACTGATCAATTCCTCTTGCAAATCATTGGCCATTGCTGTAGTCCGATaGCTCAGTCTCAGTCTCCAC +
Preference number: 4 (lower is better)
Translates to: LNAGLKVILINSSCKSLAIAVVR*LSLSLH
Trigger: GTGGAGACTGAGACTGAGCCATCGGACTACAGCAAT...GGCCAATGATTTGCAAGAGGAATTGATCAGTATCACTTTAAGTCCTGCATTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp GATACTGATCAATTCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTATCGCAGTTGGTTTCTaGAAACTCAACAATTATTTC +
Preference number: 4 (lower is better)
Translates to: DTDQFLLQIIGQNLCHGPIAVGF*KLNNYF
Trigger: GAAATAATTGTTGAGTTTCCAGAAACCAACTGCGAT...AGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAGTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp AGTCAAGTAGTCCCCCAAATAGACAATAGTTTCCTGGGCCGTCCACAGTTCAGAATCGCAGTTGGTTTCTaGAAACTCAACAATTATTTC +
Preference number: 4 (lower is better)
Translates to: SQVVPQIDNSFLGRPQFRIAVGF*KLNNYF
Trigger: GAAATAATTGTTGAGTTTCCAGAAACCAACTGCGAT...TCTGAACTGTGGACGGCCCAGGAAACTATTGTCTATTTGGGGGACTACTTGACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509722.5
CDS-3UTR CCA 90 bp GATTGTAAGTTTCCTGAGGTCTCCCCAGCCATGTGGAACTGTGAGTTAATTAAAAGCTACATGGCAGCATaGAAATGTTTCCCAGAGAAT +
Preference number: 4 (lower is better)
Translates to: DCKFPEVSPAMWNCELIKSYMAA*KCFPEN
Trigger: ATTCTCTGGGAAACATTTCCATGCTGCCATGTAGCT...TTTAATTAACTCACAGTTCCACATGGCTGGGGAGACCTCAGGAAACTTACAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CCA 90 bp AAATCAGTAGTATTGTGGATGGGATGTAGAATATCTGGGTGGGAATGTTTTGTTCCTCTTGCAAATCATTaGCCAGAACCTGTGTCACGG +
Preference number: 4 (lower is better)
Translates to: KSVVLWMGCRISGWECFVPLANH*PEPVSR
Trigger: CCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGG...AACAAAACATTCCCACCCAGATATTCTACATCCCATCCACAATACTACTGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505127.5
ENST00000509722.5
CDS-3UTR CCA 90 bp AAGTTTCCTGAGGTCTCCCCAGCCATGTGGAACTGTGAGTTAATTAAACCTCTTCCATCAAGGACAGACTaGATAAAGAAAACTGTACCA +
Preference number: 4 (lower is better)
Translates to: KFPEVSPAMWNCELIKPLPSRTD*IKKTVP
Trigger: TGGTACAGTTTTCTTTATCCAGTCTGTCCTTGATGG...AAGAGGTTTAATTAACTCACAGTTCCACATGGCTGGGGAGACCTCAGGAAACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
3UTR CAA 72 bp TCATTTCTGTACAGCCAGGTACCCGTTGCTCCATTGTaGCTTATTAGACTGCTCAGAATATACTCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: SFLYSQVPVAPL*LIRLLRIYSAF
Trigger: AAAAGCAGAGTATATTCTGAGCAGTCTAATAAGCAACAATGGAGCAACGGGTACCTGGCTGTACAGAAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515330.5
CDS-3UTR TCA 90 bp TATTGTGGATGGGATGTAGAATATCTGGGTGGGAATGTTTTGTTCATAGAGTCTACAGACATAACTTCTTaGGACAGAGCTTCTCTGTCC +
Preference number: 4 (lower is better)
Translates to: YCGWDVEYLGGNVLFIESTDITS*DRASLS
Trigger: GGACAGAGAAGCTCTGTCTCAAGAAGTTATGTCTGT...AGACTCTATGAACAAAACATTCCCACCCAGATATTCTACATCCCATCCACAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509722.5
CDS-3UTR TCA 90 bp TTAAATGCAGGACTTAAAGTGATACTGATCAATTCCTCTTGCAAATCATTGGCCCACTCAGAGACTTGTTaGAAACAGCTCCCTCACCAT +
Preference number: 4 (lower is better)
Translates to: LNAGLKVILINSSCKSLAHSETC*KQLPHH
Trigger: ATGGTGAGGGAGCTGTTTTCAACAAGTCTCTGAGTG...GGCCAATGATTTGCAAGAGGAATTGATCAGTATCACTTTAAGTCCTGCATTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR TCA 90 bp TTAAATGCAGGACTTAAAGTGATACTGATCAATTCCTCTTGCAAATCATTGGCCTGGGTCCCATATTTCTaGCTTCCTGGATACCTTCTG +
Preference number: 4 (lower is better)
Translates to: LNAGLKVILINSSCKSLAWVPYF*LPGYLL
Trigger: CAGAAGGTATCCAGGAAGTCAGAAATATGGGACCCA...GGCCAATGATTTGCAAGAGGAATTGATCAGTATCACTTTAAGTCCTGCATTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR TCA 90 bp CAACCAAATGCCACACAATTAGCTTTGAACATGCACTTAACAATTACAAGTTGTAATAAAGGAGCCCCTTaGAGGCCGAAGTACCCAAAG +
Preference number: 4 (lower is better)
Translates to: QPNATQLALNMHLTITSCNKGAP*RPKYPK
Trigger: CTTTGGGTACTTCGGCCTTCAAGGGGCTCCTTTATT...ACAACTTGTAATTGTTAAGTGCATGTTCAAAGCTAATTGTGTGGCATTTGGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515330.5
CDS-3UTR TCA 90 bp CCTGAGGTCTCCCCAGCCATGTGGAACTGTGAGTTAATTAAACCTCTTTTCTTTAATTCTCACAAGATCTaGTGGCTTTATAAGCATCTG +
Preference number: 4 (lower is better)
Translates to: PEVSPAMWNCELIKPLFFNSHKI*WLYKHL
Trigger: CAGATGCTTATAAAGCCATCAGATCTTGTGAGAATT...AAAGAAAAGAGGTTTAATTAACTCACAGTTCCACATGGCTGGGGAGACCTCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR GCA 90 bp CATTTCTGTACAGCCAGGTACCCGTTGCTCCATTGTTGCTTATTAGACTGCTCATGTTGCTTATTAGACTaGTCAGAATATACTCTGCTT +
Preference number: 4 (lower is better)
Translates to: HFCTARYPLLHCCLLDCSCCLLD*SEYTLL
Trigger: AAGCAGAGTATATTCTGAGCAGTCTAATAAGCAACA...TGAGCAGTCTAATAAGCAACAATGGAGCAACGGGTACCTGGCTGTACAGAAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515330.5
CDS-3UTR GCA 90 bp TTAAATGCAGGACTTAAAGTGATACTGATCAATTCCTCTTGCAAATCATTGGCCTGTATACAGACCGACTaGACCAGGACCTTGTCACTT +
Preference number: 4 (lower is better)
Translates to: LNAGLKVILINSSCKSLACIQTD*TRTLSL
Trigger: AAGTGACAAGGTCCTGGTGCAGTCGGTCTGTATACA...GGCCAATGATTTGCAAGAGGAATTGATCAGTATCACTTTAAGTCCTGCATTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp CATAAGAAAAATGGCCATAGGCCAAGCCATATTCTGTGGCTTTGTATTCTGTTTATCCGGCTGAGGAAGTaGCAAATATCCTACAATGGA +
Preference number: 4 (lower is better)
Translates to: HKKNGHRPSHILWLCILFIRLRK*QISYNG
Trigger: TCCATTGTAGGATATTTGGCACTTCCTCAGCCGGAT...AAACAGAATACAAAGCCACAGAATATGGCTTGGCCTATGGCCATTTTTCTTATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000505127.5
ENST00000509722.5
CDS-3UTR GCA 90 bp GCAGGACTTAAAGTGATACTGATCAATTCCTCTTGCAAATCATTGGCCAGAACCAAATCCCCTTGCCCATaGAAGATAAGTTTATCCAAC +
Preference number: 4 (lower is better)
Translates to: AGLKVILINSSCKSLARTKSPCP*KISLSN
Trigger: GTTGGATAAACTTATCTTGCATGGGCAAGGGGATTT...GGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAGTATCACTTTAAGTCCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp GACTGTGCCGTATTCTATGTGCATGGTTTCTCCATTGAAGGTCTAGTCAAAGAATTTAAATGTAGGGCCTaGGCCTCTTTCACTAATTTC +
Preference number: 4 (lower is better)
Translates to: DCAVFYVHGFSIEGLVKEFKCRA*ASFTNF
Trigger: GAAATTAGTGAAAGAGGCGCAGGCCCTACATTTAAA...TTCTTTGACTAGACCTTCAATGGAGAAACCATGCACATAGAATACGGCACAGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509722.5
CDS-3UTR GCA 90 bp TTAAATGCAGGACTTAAAGTGATACTGATCAATTCCTCTTGCAAATCATTGGCCCCATGTTGCTTTCCTTaGAGGACTTATGCCCAGAAG +
Preference number: 4 (lower is better)
Translates to: LNAGLKVILINSSCKSLAPCCFP*RTYAQK
Trigger: CTTCTGGGCATAAGTCCTGCAAGGAAAGCAACATGG...GGCCAATGATTTGCAAGAGGAATTGATCAGTATCACTTTAAGTCCTGCATTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000650871.1
CDS-3UTR GCA 90 bp TTAAATGCAGGACTTAAAGTGATACTGATCAATTCCTCTTGCAAATCATTGGCCACTCATTCTCTCTCCTaGTACCCTATGAAGAGGTGC +
Preference number: 4 (lower is better)
Translates to: LNAGLKVILINSSCKSLATHSLS*YPMKRC
Trigger: GCACCTCTTCATAGGGTAGCAGGAGAGAGAATGAGT...GGCCAATGATTTGCAAGAGGAATTGATCAGTATCACTTTAAGTCCTGCATTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CCA 90 bp GCAGGACTTAAAGTGATACTGATCAATTCCTCTTGCAAATCATTGGCCAGAACCAAATGTTCCTTCACCTaGGCAATCACAGACATAACT +
Preference number: 4 (lower is better)
Translates to: AGLKVILINSSCKSLARTKCSFT*AITDIT
Trigger: AGTTATGTCTGTGATTGCCCAGGTGAAGGAACATTT...GGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAGTATCACTTTAAGTCCTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp GCAGGACTTAAAGTGATACTGATCAATTCCTCTTGCAAATCATTGGCCAGAACCCCAAATTGTCATTGTTaGGTTCCTGAAGAGAGAGAT +
Preference number: 4 (lower is better)
Translates to: AGLKVILINSSCKSLARTPNCHC*VPEERD
Trigger: ATCTCTCTCTTCAGGAACCCAACAATGACAATTTGG...GGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAGTATCACTTTAAGTCCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp GATTGTAAGTTTCCTGAGGTCTCCCCAGCCATGTGGAACTGTGAGTTAATTAAACCAAATTGTCATTGTTaGGTTCCTGAAGAGAGAGAT +
Preference number: 4 (lower is better)
Translates to: DCKFPEVSPAMWNCELIKPNCHC*VPEERD
Trigger: ATCTCTCTCTTCAGGAACCCAACAATGACAATTTGG...TTTAATTAACTCACAGTTCCACATGGCTGGGGAGACCTCAGGAAACTTACAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR TCA 90 bp TTAAATGCAGGACTTAAAGTGATACTGATCAATTCCTCTTGCAAATCATTGGCCCTGGTACAGCCTCTCTaGAACACACTGTTTCTCATA +
Preference number: 4 (lower is better)
Translates to: LNAGLKVILINSSCKSLALVQPL*NTLFLI
Trigger: TATGAGAAACAGTGTGTTTCAGAGAGGCTGTACCAG...GGCCAATGATTTGCAAGAGGAATTGATCAGTATCACTTTAAGTCCTGCATTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000177648.13
ENST00000504176.6
ENST00000650871.1
CDS-3UTR TCA 90 bp TTAAATGCAGGACTTAAAGTGATACTGATCAATTCCTCTTGCAAATCATTGGCCTCAGTCTCCACATCTTaGTCCAAGGAGACTCGAAAT +
Preference number: 4 (lower is better)
Translates to: LNAGLKVILINSSCKSLASVSTS*SKETRN
Trigger: ATTTCGAGTCTCCTTGGATCAAGATGTGGAGACTGA...GGCCAATGATTTGCAAGAGGAATTGATCAGTATCACTTTAAGTCCTGCATTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR TCA 90 bp AAACTCATAAGAAAAATGGCCATAGGCCAAGCCATATTCTGTGGCTTTGTATTCTGTAAGGCTCCACACTaGTACATCCCTTTATTGTCT +
Preference number: 4 (lower is better)
Translates to: KLIRKMAIGQAIFCGFVFCKAPH*YIPLLS
Trigger: AGACAATAAAGGGATGTATCAGTGTGGAGCCTTACA...GAATACAAAGCCACAGAATATGGCTTGGCCTATGGCCATTTTTCTTATGAGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000505127.5
ENST00000509722.5
CDS-3UTR GCA 90 bp GATGTAGAATATCTGGGTGGGAATGTTTTGTTCATAGAGTCTCTTGTTAAATTCACTTGCTTGCACTCTTaGAGTAGCACAGCTACCACT +
Preference number: 4 (lower is better)
Translates to: DVEYLGGNVLFIESLVKFTCLHS*SSTATT
Trigger: AGTGGTAGCTGTGCTACTGCAAGAGTGCAAGCAAGT...GAATTTAACAAGAGACTCTATGAACAAAACATTCCCACCCAGATATTCTACATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505127.5
ENST00000509722.5
CDS-3UTR GCA 90 bp CAACCAAATGCCACACAATTAGCTTTGAACATGCACTTAACAATTACAAGTTGTACGGCTTGTTTGTACTaGCACTTTTCAGGCACGAAG +
Preference number: 4 (lower is better)
Translates to: QPNATQLALNMHLTITSCTACLY*HFSGTK
Trigger: CTTCGTGCCTGAAAAGTGGCAGTACAAACAAGCCGT...ACAACTTGTAATTGTTAAGTGCATGTTCAAAGCTAATTGTGTGGCATTTGGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515330.5
CDS-3UTR GCA 90 bp TTAAATGCAGGACTTAAAGTGATACTGATCAATTCCTCTTGCAAATCATTGGCCATCCGGCTGAGGAAGTaGCAAATATCCTACAATGGA +
Preference number: 4 (lower is better)
Translates to: LNAGLKVILINSSCKSLAIRLRK*QISYNG
Trigger: TCCATTGTAGGATATTTGGCACTTCCTCAGCCGGAT...GGCCAATGATTTGCAAGAGGAATTGATCAGTATCACTTTAAGTCCTGCATTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp TTAAATGCAGGACTTAAAGTGATACTGATCAATTCCTCTTGCAAATCATTGGCCTGTGAATGCAATGAATaGATAGCTCTGCCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: LNAGLKVILINSSCKSLACECNE*IALPSL
Trigger: CAGGGAAGGCAGAGCTATGCATTCATTGCATTCACA...GGCCAATGATTTGCAAGAGGAATTGATCAGTATCACTTTAAGTCCTGCATTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp TATTGTGGATGGGATGTAGAATATCTGGGTGGGAATGTTTTGTTCATAGAGTCTCTGATCAATTCCTCTTaGAAATCATTGGCCAGAACC +
Preference number: 4 (lower is better)
Translates to: YCGWDVEYLGGNVLFIESLINSS*KSLART
Trigger: GGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAG...AGACTCTATGAACAAAACATTCCCACCCAGATATTCTACATCCCATCCACAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505127.5
ENST00000509722.5
CDS-3UTR CCA 90 bp GATGTAGAATATCTGGGTGGGAATGTTTTGTTCATAGAGTCTCTTGTTAAATTCACTTGTGGAGACCTTTaGCGACCTGCAGAAGTTTTC +
Preference number: 4 (lower is better)
Translates to: DVEYLGGNVLFIESLVKFTCGDL*RPAEVF
Trigger: GAAAACTTCTGCAGGTCGCCAAAGGTCTCCACAAGT...GAATTTAACAAGAGACTCTATGAACAAAACATTCCCACCCAGATATTCTACATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505127.5
ENST00000509722.5
CDS-3UTR CCA 90 bp GCAGGACTTAAAGTGATACTGATCAATTCCTCTTGCAAATCATTGGCCAGAACCGTCTCTTTGACAATGTaGCTTTTCTTGAGTAGTACT +
Preference number: 4 (lower is better)
Translates to: AGLKVILINSSCKSLARTVSLTM*LFLSST
Trigger: AGTACTACTCAAGAAAAGCCACATTGTCAAAGAGAC...GGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAGTATCACTTTAAGTCCTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp GATTGTAAGTTTCCTGAGGTCTCCCCAGCCATGTGGAACTGTGAGTTAATTAAAGTCTCTTTGACAATGTaGCTTTTCTTGAGTAGTACT +
Preference number: 4 (lower is better)
Translates to: DCKFPEVSPAMWNCELIKVSLTM*LFLSST
Trigger: AGTACTACTCAAGAAAAGCCACATTGTCAAAGAGAC...TTTAATTAACTCACAGTTCCACATGGCTGGGGAGACCTCAGGAAACTTACAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CCA 90 bp GACTGTGCCGTATTCTATGTGCATGGTTTCTCCATTGAAGGTCTAGTCAAAGAACCAAGCCATATTCTGTaGCTTTGTATTCTGTTTTCA +
Preference number: 4 (lower is better)
Translates to: DCAVFYVHGFSIEGLVKEPSHIL*LCILFS
Trigger: TGAAAACAGAATACAAAGCCACAGAATATGGCTTGG...TTCTTTGACTAGACCTTCAATGGAGAAACCATGCACATAGAATACGGCACAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505127.5
ENST00000509722.5
CDS-3UTR CCA 90 bp GCAGGACTTAAAGTGATACTGATCAATTCCTCTTGCAAATCATTGGCCAGAACCCCAAGCCATATTCTGTaGCTTTGTATTCTGTTTTCA +
Preference number: 4 (lower is better)
Translates to: AGLKVILINSSCKSLARTPSHIL*LCILFS
Trigger: TGAAAACAGAATACAAAGCCACAGAATATGGCTTGG...GGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAGTATCACTTTAAGTCCTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp CAACCAAATGCCACACAATTAGCTTTGAACATGCACTTAACAATTACAAGTTGTGGTAAGGTGGGAAGTTaGACAGTATCTGAGTTCACG +
Preference number: 4 (lower is better)
Translates to: QPNATQLALNMHLTITSCGKVGS*TVSEFT
Trigger: CGTGAACTCAGATACTGTCCAACTTCCCACCTTACC...ACAACTTGTAATTGTTAAGTGCATGTTCAAAGCTAATTGTGTGGCATTTGGTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515330.5
CDS-3UTR CCA 90 bp AAAGCAGCAACCAAATGCCACACAATTAGCTTTGAACATGCACTTAACAATTACCCTAAGTTGGTAAGGTaGGAAGTTGGACAGTATCTG +
Preference number: 4 (lower is better)
Translates to: KAATKCHTISFEHALNNYPKLVR*EVGQYL
Trigger: CAGATACTGTCCAACTTCCCACCTTACCAACTTAGG...GTAATTGTTAAGTGCATGTTCAAAGCTAATTGTGTGGCATTTGGTTGCTGCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515330.5
CDS-3UTR TCA 90 bp GATGTAGAATATCTGGGTGGGAATGTTTTGTTCATAGAGTCTCTTGTTAAATTCTCAGTCTCCACATCTTaGTCCAAGGAGACTCGAAAT +
Preference number: 4 (lower is better)
Translates to: DVEYLGGNVLFIESLVKFSVSTS*SKETRN
Trigger: ATTTCGAGTCTCCTTGGATCAAGATGTGGAGACTGA...GAATTTAACAAGAGACTCTATGAACAAAACATTCCCACCCAGATATTCTACATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509722.5
CDS-3UTR GCA 90 bp TTAAATGCAGGACTTAAAGTGATACTGATCAATTCCTCTTGCAAATCATTGGCCCTGATCAATTCCTCTTaGAAATCATTGGCCAGAACC +
Preference number: 4 (lower is better)
Translates to: LNAGLKVILINSSCKSLALINSS*KSLART
Trigger: GGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAG...GGCCAATGATTTGCAAGAGGAATTGATCAGTATCACTTTAAGTCCTGCATTTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp AAATCAGTAGTATTGTGGATGGGATGTAGAATATCTGGGTGGGAATGTTTTGTTTGCAGGATCTTGTGCTaGCAATTAAATGCAGGACTT +
Preference number: 4 (lower is better)
Translates to: KSVVLWMGCRISGWECFVCRILC*QLNAGL
Trigger: AAGTCCTGCATTTAATTGGCAGCACAAGATCCTGCA...AACAAAACATTCCCACCCAGATATTCTACATCCCATCCACAATACTACTGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505127.5
ENST00000509722.5
CDS-3UTR GCA 90 bp AAACTCATAAGAAAAATGGCCATAGGCCAAGCCATATTCTGTGGCTTTGTATTCGGCTTAAACAACACATaGCTTTCTCAAGAGTGCTTT +
Preference number: 4 (lower is better)
Translates to: KLIRKMAIGQAIFCGFVFGLNNT*LSQECF
Trigger: AAAGCACTCTTGAGAAAGGCATGTGTTGTTTAAGCC...GAATACAAAGCCACAGAATATGGCTTGGCCTATGGCCATTTTTCTTATGAGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505127.5
CDS-3UTR CCA 90 bp AAACTCATAAGAAAAATGGCCATAGGCCAAGCCATATTCTGTGGCTTTGTATTCCCAAATTGTCATTGTTaGGTTCCTGAAGAGAGAGAT +
Preference number: 4 (lower is better)
Translates to: KLIRKMAIGQAIFCGFVFPNCHC*VPEERD
Trigger: ATCTCTCTCTTCAGGAACCCAACAATGACAATTTGG...GAATACAAAGCCACAGAATATGGCTTGGCCTATGGCCATTTTTCTTATGAGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509722.5
CDS-3UTR CCA 90 bp TTAAATGCAGGACTTAAAGTGATACTGATCAATTCCTCTTGCAAATCATTGGCCATATTTCTGACTTCCTaGATACCTTCTGGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: LNAGLKVILINSSCKSLAIFLTS*IPSGAP
Trigger: AGGAGCTCCAGAAGGTATCCAGGAAGTCAGAAATAT...GGCCAATGATTTGCAAGAGGAATTGATCAGTATCACTTTAAGTCCTGCATTTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR TCA 90 bp TTAAATGCAGGACTTAAAGTGATACTGATCAATTCCTCTTGCAAATCATTGGCCTTCTTCTTTTTGGACTaGAGGATGTGTGCCCATATT +
Preference number: 4 (lower is better)
Translates to: LNAGLKVILINSSCKSLAFFFLD*RMCAHI
Trigger: AATATGGGCACACATCCTTCAGTCCAAAAAGAAGAA...GGCCAATGATTTGCAAGAGGAATTGATCAGTATCACTTTAAGTCCTGCATTTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp CAACCAAATGCCACACAATTAGCTTTGAACATGCACTTAACAATTACAAGTTGTCCGTTGCTCCATTGTTaGTTATTAGACTGCTCAGAA +
Preference number: 4 (lower is better)
Translates to: QPNATQLALNMHLTITSCPLLHC*LLDCSE
Trigger: TTCTGAGCAGTCTAATAAGCAACAATGGAGCAACGG...ACAACTTGTAATTGTTAAGTGCATGTTCAAAGCTAATTGTGTGGCATTTGGTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515330.5
CDS-3UTR GCA 90 bp TTAAATGCAGGACTTAAAGTGATACTGATCAATTCCTCTTGCAAATCATTGGCCAAATCCCCTTGCCCATaGAAGATAAGTTTATCCAAC +
Preference number: 4 (lower is better)
Translates to: LNAGLKVILINSSCKSLAKSPCP*KISLSN
Trigger: GTTGGATAAACTTATCTTGCATGGGCAAGGGGATTT...GGCCAATGATTTGCAAGAGGAATTGATCAGTATCACTTTAAGTCCTGCATTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp TTAAATGCAGGACTTAAAGTGATACTGATCAATTCCTCTTGCAAATCATTGGCCTTTAAATGTAGGGCCTaGGCCTCTTTCACTAATTTC +
Preference number: 4 (lower is better)
Translates to: LNAGLKVILINSSCKSLAFKCRA*ASFTNF
Trigger: GAAATTAGTGAAAGAGGCGCAGGCCCTACATTTAAA...GGCCAATGATTTGCAAGAGGAATTGATCAGTATCACTTTAAGTCCTGCATTTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR GCA 90 bp TTAAATGCAGGACTTAAAGTGATACTGATCAATTCCTCTTGCAAATCATTGGCCGGCTTAAACAACACATaGCTTTCTCAAGAGTGCTTT +
Preference number: 4 (lower is better)
Translates to: LNAGLKVILINSSCKSLAGLNNT*LSQECF
Trigger: AAAGCACTCTTGAGAAAGGCATGTGTTGTTTAAGCC...GGCCAATGATTTGCAAGAGGAATTGATCAGTATCACTTTAAGTCCTGCATTTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000650871.1
CDS-3UTR CCA 90 bp TTAAATGCAGGACTTAAAGTGATACTGATCAATTCCTCTTGCAAATCATTGGCCAATCGTTCTTGCTCATaGAAACAAAGATGTCTGCCA +
Preference number: 4 (lower is better)
Translates to: LNAGLKVILINSSCKSLANRSCS*KQRCLP
Trigger: TGGCAGACATCTTTGTTTCCATGAGCAAGAACGATT...GGCCAATGATTTGCAAGAGGAATTGATCAGTATCACTTTAAGTCCTGCATTTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
3UTR CAA 72 bp TGTGGATGGGATGTAGAATATCTGGGTGGGAATGTTTaGTTCATAGAGTCTCTTGTTAAATTCTGTCACATA +
Preference number: 4 (lower is better)
Translates to: CGWDVEYLGGNV*FIESLVKFCHI
Trigger: TATGTGACAGAATTTAACAAGAGACTCTATGAACAAAACATTCCCACCCAGATATTCTACATCCCATCCACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505127.5
ENST00000509722.5
CDS-3UTR TCA 90 bp TTAAATGCAGGACTTAAAGTGATACTGATCAATTCCTCTTGCAAATCATTGGCCAATTCTCACAAGATCTaGTGGCTTTATAAGCATCTG +
Preference number: 4 (lower is better)
Translates to: LNAGLKVILINSSCKSLANSHKI*WLYKHL
Trigger: CAGATGCTTATAAAGCCATCAGATCTTGTGAGAATT...GGCCAATGATTTGCAAGAGGAATTGATCAGTATCACTTTAAGTCCTGCATTTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR GCA 90 bp AAACTCATAAGAAAAATGGCCATAGGCCAAGCCATATTCTGTGGCTTTGTATTCTGTTGCTTATTAGACTaGTCAGAATATACTCTGCTT +
Preference number: 4 (lower is better)
Translates to: KLIRKMAIGQAIFCGFVFCCLLD*SEYTLL
Trigger: AAGCAGAGTATATTCTGAGCAGTCTAATAAGCAACA...GAATACAAAGCCACAGAATATGGCTTGGCCTATGGCCATTTTTCTTATGAGTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000505127.5
ENST00000509722.5
CDS-3UTR GCA 90 bp TTAAATGCAGGACTTAAAGTGATACTGATCAATTCCTCTTGCAAATCATTGGCCTTTTGGAAATCCCCTTaGCCATGCAAGATAAGTTTA +
Preference number: 4 (lower is better)
Translates to: LNAGLKVILINSSCKSLAFWKSP*PCKISL
Trigger: TAAACTTATCTTGCATGGGCAAGGGGATTTCCAAAA...GGCCAATGATTTGCAAGAGGAATTGATCAGTATCACTTTAAGTCCTGCATTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CCA 90 bp TTAAATGCAGGACTTAAAGTGATACTGATCAATTCCTCTTGCAAATCATTGGCCGCTCTAAAATCTCAATaGCTTAAACAACACATGCCT +
Preference number: 4 (lower is better)
Translates to: LNAGLKVILINSSCKSLAALKSQ*LKQHMP
Trigger: AGGCATGTGTTGTTTAAGCCATTGAGATTTTAGAGC...GGCCAATGATTTGCAAGAGGAATTGATCAGTATCACTTTAAGTCCTGCATTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000650871.1
CDS-3UTR CCA 90 bp GATGTAGAATATCTGGGTGGGAATGTTTTGTTCATAGAGTCTCTTGTTAAATTCCCAAGCCATATTCTGTaGCTTTGTATTCTGTTTTCA +
Preference number: 4 (lower is better)
Translates to: DVEYLGGNVLFIESLVKFPSHIL*LCILFS
Trigger: TGAAAACAGAATACAAAGCCACAGAATATGGCTTGG...GAATTTAACAAGAGACTCTATGAACAAAACATTCCCACCCAGATATTCTACATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505127.5
ENST00000509722.5
CDS CCA 90 bp GCAGCCGCACAGTCCCGAGCGAGGATGGAGGCCCTCAGGGACGCCTaGAGGAACAGCGTGGAACATCGTGAGCCAGGCGGAAACGCTGGC +
Preference number: 5 (lower is better)
Translates to: AAAQSRARMEALRDA*RNSVEHREPGGNAG
Trigger: GCCAGCGTTTCCGCCTGGCTCACGATGTTCCACGCTGTTCCTCCAGGCGTCCCTGAGGGCCTCCATCCTCGCTCGGGACTGTGCGGCTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505912.1
CDS-3UTR CAA 90 bp GCTTACAGAGGAATTGGGGGTCTCCGCCCTCTGACCAGGCGGCTGTCTCAGAATAAGGCAGCTGCCAGCTaGCAGGCTTCTGCAGCGGAC +
Preference number: 5 (lower is better)
Translates to: AYRGIGGLRPLTRRLSQNKAAAS*QASAAD
Trigger: GTCCGCTGCAGAAGCCTGCAAGCTGGCAGCTGCCTT...ATTCTGAGACAGCCGCCTGGTCAGAGGGCGGAGACCCCCAATTCCTCTGTAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509722.5
CDS CCA 90 bp GTTCACGGAGATTCGGGCTTGGCGAATAACCACCTGCGGGGCAATTaGCGTGGCTGGCTGCAACTTGTGGAGACCTTTGGCGACCTGCAG +
Preference number: 5 (lower is better)
Translates to: VHGDSGLANNHLRGN*RGWLQLVETFGDLQ
Trigger: CTGCAGGTCGCCAAAGGTCTCCACAAGTTGCAGCCAGCCACGCCAATTGCCCCGCAGGTGGTTATTCGCCAAGCCCGAATCTCCGTGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000504745.1
ENST00000505127.5
ENST00000505912.1
ENST00000509722.5
ENST00000515106.1
ENST00000515330.5
ENST00000650871.1
CDS-3UTR CAA 90 bp CAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGGTGGCTGGCTGCAACTaGTGGAGACCTTTGGCGACC +
Preference number: 5 (lower is better)
Translates to: QIIGQNLCHGPAQAPKDQVAGCN*WRPLAT
Trigger: GGTCGCCAAAGGTCTCCACAAGTTGCAGCCAGCCAC...CTGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp CAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGCACGGAGATTCGGGCTaGGCGAATAACCACCTGCGG +
Preference number: 5 (lower is better)
Translates to: QIIGQNLCHGPAQAPKDQHGDSG*ANNHLR
Trigger: CCGCAGGTGGTTATTCGCCAAGCCCGAATCTCCGTG...CTGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp TGCGGTCATCTGTCGCTCCACATCAGTGAAGTGGTGCCAGAGCCCCTTCTGCTCCACGGAGATTCGGGCTaGGCGAATAACCACCTGCGG +
Preference number: 5 (lower is better)
Translates to: CGHLSLHISEVVPEPLLLHGDSG*ANNHLR
Trigger: CCGCAGGTGGTTATTCGCCAAGCCCGAATCTCCGTG...GAGCAGAAGGGGCTCTGGCACCACTTCACTGATGTGGAGCGACAGATGACCGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505127.5
ENST00000509722.5
CDS-3UTR CAA 90 bp CCCTGCTGGCACTCATTCTCTCTCCTGCTACCCTATGAAGAGGTGCCTTCTGCCAAGGCAGCTGCCAGCTaGCAGGCTTCTGCAGCGGAC +
Preference number: 5 (lower is better)
Translates to: PCWHSFSLLLPYEEVPSAKAAAS*QASAAD
Trigger: GTCCGCTGCAGAAGCCTGCAAGCTGGCAGCTGCCTT...GGCAGAAGGCACCTCTTCATAGGGTAGCAGGAGAGAGAATGAGTGCCAGCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CAA 90 bp CAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGACTGTGCCGTATCCTTACAGAGCTGACTaGCTGCATGGACCGTCCCTG +
Preference number: 5 (lower is better)
Translates to: QNLCHGPAQAPKDQTVPYPYRAD*LHGPSL
Trigger: CAGGGACGGTCCATGCAGCAAGTCAGCTCTGTAAGG...ATACGGCACAGTCTGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS CCA 90 bp CCTGCGGGGCAATTGGCGTGGCTGGCTGCAACTTGTGGAGACCTTTaGCGACCTGCAGAAGTTTTCCAGAGACGTCGAGCCCATACAGGA +
Preference number: 5 (lower is better)
Translates to: PAGQLAWLAATCGDL*RPAEVFQRRRAHTG
Trigger: TCCTGTATGGGCTCGACGTCTCTGGAAAACTTCTGCAGGTCGCCAAAGGTCTCCACAAGTTGCAGCCAGCCACGCCAATTGCCCCGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000504745.1
ENST00000505127.5
ENST00000505912.1
ENST00000509722.5
ENST00000515106.1
ENST00000515330.5
ENST00000650871.1
CDS-3UTR CAA 90 bp CAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGCGCTGGTCCTCGCTCTaGTCCTCTTCCGACACATCT +
Preference number: 5 (lower is better)
Translates to: QIIGQNLCHGPAQAPKDQRWSSL*SSSDTS
Trigger: AGATGTGTCGGAAGAGGACAAGAGCGAGGACCAGCG...CTGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp TGCTGTGCGGTCATCTGTCGCTCCACATCAGTGAAGTGGTGCCAGAGCCCCTTCCCTTACAGAGCTGACTaGCTGCATGGACCGTCCCTG +
Preference number: 5 (lower is better)
Translates to: CCAVICRSTSVKWCQSPFPYRAD*LHGPSL
Trigger: CAGGGACGGTCCATGCAGCAAGTCAGCTCTGTAAGG...GAAGGGGCTCTGGCACCACTTCACTGATGTGGAGCGACAGATGACCGCACAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509722.5
CDS GCA 90 bp GCAATTGGCGTGGCTGGCTGCAACTTGTGGAGACCTTTGGCGACCTaGAGAAGTTTTCCAGAGACGTCGAGCCCATACAGGAACCGGTCC +
Preference number: 5 (lower is better)
Translates to: AIGVAGCNLWRPLAT*RSFPETSSPYRNRS
Trigger: GGACCGGTTCCTGTATGGGCTCGACGTCTCTGGAAAACTTCTGCAGGTCGCCAAAGGTCTCCACAAGTTGCAGCCAGCCACGCCAATTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000504745.1
ENST00000505127.5
ENST00000505912.1
ENST00000509722.5
ENST00000515106.1
ENST00000515330.5
ENST00000650871.1
CDS GCA 90 bp TGGGATCCTGAGTTCACGGAGATTCGGGCTTGGCGAATAACCACCTaGGGGGCAATTGGCGTGGCTGGCTGCAACTTGTGGAGACCTTTG +
Preference number: 5 (lower is better)
Translates to: WDPEFTEIRAWRITT*GAIGVAGCNLWRPL
Trigger: CAAAGGTCTCCACAAGTTGCAGCCAGCCACGCCAATTGCCCCGCAGGTGGTTATTCGCCAAGCCCGAATCTCCGTGAACTCAGGATCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505912.1
CDS GCA 90 bp AGTGGTCCTGAGTTCACGGAGATTCGGGCTTGGCGAATAACCACCTaGGGGGCAATTGGCGTGGCTGGCTGCAACTTGTGGAGACCTTTG +
Preference number: 5 (lower is better)
Translates to: SGPEFTEIRAWRITT*GAIGVAGCNLWRPL
Trigger: CAAAGGTCTCCACAAGTTGCAGCCAGCCACGCCAATTGCCCCGCAGGTGGTTATTCGCCAAGCCCGAATCTCCGTGAACTCAGGACCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515106.1
CDS CCA 90 bp CGAATAACCACCTGCGGGGCAATTGGCGTGGCTGGCTGCAACTTGTaGAGACCTTTGGCGACCTGCAGAAGTTTTCCAGAGACGTCGAGC +
Preference number: 5 (lower is better)
Translates to: RITTCGAIGVAGCNL*RPLATCRSFPETSS
Trigger: GCTCGACGTCTCTGGAAAACTTCTGCAGGTCGCCAAAGGTCTCCACAAGTTGCAGCCAGCCACGCCAATTGCCCCGCAGGTGGTTATTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000504745.1
ENST00000505127.5
ENST00000505912.1
ENST00000509722.5
ENST00000515106.1
ENST00000515330.5
ENST00000650871.1
CDS CCA 90 bp GATTCGGGCTTGGCGAATAACCACCTGCGGGGCAATTGGCGTGGCTaGCTGCAACTTGTGGAGACCTTTGGCGACCTGCAGAAGTTTTCC +
Preference number: 5 (lower is better)
Translates to: DSGLANNHLRGNWRG*LQLVETFGDLQKFS
Trigger: GGAAAACTTCTGCAGGTCGCCAAAGGTCTCCACAAGTTGCAGCCAGCCACGCCAATTGCCCCGCAGGTGGTTATTCGCCAAGCCCGAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000504745.1
ENST00000505127.5
ENST00000505912.1
ENST00000509722.5
ENST00000515106.1
ENST00000515330.5
ENST00000650871.1
CDS CCA 90 bp GCCTCTGCAGCGCTGGTCCTCGCTCTTGTCCTCTTCCGACACATCTaGCGCTTCCAACAAGAGCTGATCCAGCACTTGCTTGCACTCTTG +
Preference number: 5 (lower is better)
Translates to: ASAALVLALVLFRHI*RFQQELIQHLLALL
Trigger: CAAGAGTGCAAGCAAGTGCTGGATCAGCTCTTGTTGGAAGCGCCAGATGTGTCGGAAGAGGACAAGAGCGAGGACCAGCGCTGCAGAGGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504176.6
ENST00000509722.5
ENST00000515106.1
CDS-3UTR CAA 90 bp TTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCGCTGGTCCTCGCTCTaGTCCTCTTCCGACACATCT +
Preference number: 5 (lower is better)
Translates to: LQIIGQNLCHGPAQAPKDRWSSL*SSSDTS
Trigger: AGATGTGTCGGAAGAGGACAAGAGCGAGGACCAGCG...GTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp GCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCACTCTGGGCCCACGGCTaGTTTGTACTGCCACTTTTC +
Preference number: 5 (lower is better)
Translates to: ANHWPEPVSRPCPSPKGPLWAHG*FVLPLF
Trigger: GAAAAGTGGCAGTACAAACAAGCCGTGGGCCCAGAG...TGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000505127.5
ENST00000650871.1
CDS-3UTR CAA 90 bp GCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCATCCTTCAGGTTTGTTTaGTCCTCTGGGCCCACGGCT +
Preference number: 5 (lower is better)
Translates to: ANHWPEPVSRPCPSPKGPSFRFV*SSGPTA
Trigger: AGCCGTGGGCCCAGAGGACAAAACAAACCTGAAGGA...TGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000505127.5
ENST00000650871.1
CDS CCA 90 bp AGCTCTGCAGCGCTGGTCCTCGCTCTTGTCCTCTTCCGACACATCTaGCGCTTCCAACAAGAGCTGATCCAGCACTTGCTTGCACTCTTG +
Preference number: 5 (lower is better)
Translates to: SSAALVLALVLFRHI*RFQQELIQHLLALL
Trigger: CAAGAGTGCAAGCAAGTGCTGGATCAGCTCTTGTTGGAAGCGCCAGATGTGTCGGAAGAGGACAAGAGCGAGGACCAGCGCTGCAGAGCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000505127.5
ENST00000509688.5
ENST00000515330.5
ENST00000650871.1
CDS-3UTR CAA 90 bp AATTCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCGCTGGTCCTCGCTCTaGTCCTCTTCCGACACATCT +
Preference number: 5 (lower is better)
Translates to: NSSCKSLARTCVTALPKPRWSSL*SSSDTS
Trigger: AGATGTGTCGGAAGAGGACAAGAGCGAGGACCAGCG...GGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGAATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp CCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGCCACTTCATTTCCTTaGCCTCCTGGATCAGGGTCC +
Preference number: 5 (lower is better)
Translates to: PLANHWPEPVSRPCPSPKATSFP*PPGSGS
Trigger: GGACCCTGATCCAGGAGGCAAAGGAAATGAAGTGGC...TTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000505127.5
ENST00000650871.1
CDS-3UTR CAA 90 bp TCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAGCCACTTCATTTCCTTaGCCTCCTGGATCAGGGTCC +
Preference number: 5 (lower is better)
Translates to: SSCKSLARTCVTALPKPQATSFP*PPGSGS
Trigger: GGACCCTGATCCAGGAGGCAAAGGAAATGAAGTGGC...TTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000505127.5
ENST00000650871.1
CDS-3UTR CAA 90 bp TTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCTCTGGGCCCACGGCTaGTTTGTACTGCCACTTTTC +
Preference number: 5 (lower is better)
Translates to: LQIIGQNLCHGPAQAPKDLWAHG*FVLPLF
Trigger: GAAAAGTGGCAGTACAAACAAGCCGTGGGCCCAGAG...GTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000505127.5
ENST00000650871.1
CDS-3UTR CAA 90 bp CCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAATCCTTCAGGTTTGTTTaGTCCTCTGGGCCCACGGCT +
Preference number: 5 (lower is better)
Translates to: PLANHWPEPVSRPCPSPKSFRFV*SSGPTA
Trigger: AGCCGTGGGCCCAGAGGACAAAACAAACCTGAAGGA...TTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000505127.5
ENST00000650871.1
CDS-3UTR CAA 90 bp GAAGTGGTGCCAGAGCCCCTTCTGCTCCTTATAGTCTTTCCCAACATACCTCCCCACGGAGATTCGGGCTaGGCGAATAACCACCTGCGG +
Preference number: 5 (lower is better)
Translates to: EVVPEPLLLLIVFPNIPPHGDSG*ANNHLR
Trigger: CCGCAGGTGGTTATTCGCCAAGCCCGAATCTCCGTG...GGGAGGTATGTTGGGAAAGACTATAAGGAGCAGAAGGGGCTCTGGCACCACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505127.5
ENST00000509722.5
CDS-3UTR CAA 90 bp TGCTGTGCGGTCATCTGTCGCTCCACATCAGTGAAGTGGTGCCAGAGCCCCTTCCCACATCCCCAGCTTTaGCAGAATCTGCCCTCTGAT +
Preference number: 5 (lower is better)
Translates to: CCAVICRSTSVKWCQSPFPHPQL*QNLPSD
Trigger: ATCAGAGGGCAGATTCTGCAAAAGCTGGGGATGTGG...GAAGGGGCTCTGGCACCACTTCACTGATGTGGAGCGACAGATGACCGCACAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505127.5
ENST00000509722.5
CDS-3UTR CAA 90 bp AATTCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCCTTACAGAGCTGACTaGCTGCATGGACCGTCCCTG +
Preference number: 5 (lower is better)
Translates to: NSSCKSLARTCVTALPKPPYRAD*LHGPSL
Trigger: CAGGGACGGTCCATGCAGCAAGTCAGCTCTGTAAGG...GGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGAATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp CAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGACTGTGCCGTATTGTACAGCTTCCCCATaGCTTCCTTACAGAGCTGAC +
Preference number: 5 (lower is better)
Translates to: QNLCHGPAQAPKDQTVPYCTASP*LPYRAD
Trigger: GTCAGCTCTGTAAGGAAGCAATGGGGAAGCTGTACA...ATACGGCACAGTCTGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp CAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGACTGTGCCGTATTTCCCCTGCCTGTCTTaGACATCGCAGTTGGTTTCT +
Preference number: 5 (lower is better)
Translates to: QNLCHGPAQAPKDQTVPYFPCLS*TSQLVS
Trigger: AGAAACCAACTGCGATGTCAAAGACAGGCAGGGGAA...ATACGGCACAGTCTGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp AATTCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCATGCTGTCGAGCAGTaGCCCCTCCTCATCCACTGT +
Preference number: 5 (lower is better)
Translates to: NSSCKSLARTCVTALPKPHAVEQ*PLLIHC
Trigger: ACAGTGGATGAGGAGGGGCAACTGCTCGACAGCATG...GGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGAATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp AATTCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCGAGAGCCGTGCCCATTaGTGCAGGGAACATCCATGC +
Preference number: 5 (lower is better)
Translates to: NSSCKSLARTCVTALPKPESRAH*CREHPC
Trigger: GCATGGATGTTCCCTGCACAAATGGGCACGGCTCTC...GGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGAATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp GCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAATGTGCTCGGTGGAGTaGACTGGGCTTAAAAACCCC +
Preference number: 5 (lower is better)
Translates to: ANHWPEPVSRPCPSPKGPMCSVE*TGLKNP
Trigger: GGGGTTTTTAAGCCCAGTCAACTCCACCGAGCACAT...TGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp CAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGATGTGCTCGGTGGAGTaGACTGGGCTTAAAAACCCC +
Preference number: 5 (lower is better)
Translates to: QIIGQNLCHGPAQAPKDQMCSVE*TGLKNP
Trigger: GGGGTTTTTAAGCCCAGTCAACTCCACCGAGCACAT...CTGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp CAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGACTGTGCCGTATTCCTCTTGCAAATCATaGGCCAGAACCTGTGTCACG +
Preference number: 5 (lower is better)
Translates to: QNLCHGPAQAPKDQTVPYSSCKS*ARTCVT
Trigger: CGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGA...ATACGGCACAGTCTGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp GCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCATCCCTCATGGGTGAGTaGGGGCTGTTTTCCATGTTG +
Preference number: 5 (lower is better)
Translates to: ANHWPEPVSRPCPSPKGPSLMGE*GLFSML
Trigger: CAACATGGAAAACAGCCCCAACTCACCCATGAGGGA...TGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000650871.1
CDS-3UTR CAA 90 bp CAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGTCCCTCATGGGTGAGTaGGGGCTGTTTTCCATGTTG +
Preference number: 5 (lower is better)
Translates to: QIIGQNLCHGPAQAPKDQSLMGE*GLFSML
Trigger: CAACATGGAAAACAGCCCCAACTCACCCATGAGGGA...CTGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000650871.1
CDS-3UTR CAA 90 bp CAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGAATCTCTTGGCCCACTaGCTTGGACTGTGTAGGGCA +
Preference number: 5 (lower is better)
Translates to: QIIGQNLCHGPAQAPKDQNLLAH*LGLCRA
Trigger: TGCCCTACACAGTCCAAGCAAGTGGGCCAAGAGATT...CTGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458497.6
CDS TCA 90 bp GGAACAGCGTGGAACATCGTGAGCCAGGCGGAAACGCTGGCAGGCTaGGGGCCAGGCTTAGCGTGGGAGGCATTTTCATTAATACAACAA +
Preference number: 5 (lower is better)
Translates to: GTAWNIVSQAETLAG*GPGLAWEAFSLIQQ
Trigger: TTGTTGTATTAATGAAAATGCCTCCCACGCTAAGCCTGGCCCTCAGCCTGCCAGCGTTTCCGCCTGGCTCACGATGTTCCACGCTGTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505912.1
CDS GCA 90 bp AGTTTTCCTGAGTTCACGGAGATTCGGGCTTGGCGAATAACCACCTaGGGGGCAATTGGCGTGGCTGGCTGCAACTTGTGGAGACCTTTG +
Preference number: 5 (lower is better)
Translates to: SFPEFTEIRAWRITT*GAIGVAGCNLWRPL
Trigger: CAAAGGTCTCCACAAGTTGCAGCCAGCCACGCCAATTGCCCCGCAGGTGGTTATTCGCCAAGCCCGAATCTCCGTGAACTCAGGAAAACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000504745.1
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS GCA 90 bp ACAGTATCTGAGTTCACGGAGATTCGGGCTTGGCGAATAACCACCTaGGGGGCAATTGGCGTGGCTGGCTGCAACTTGTGGAGACCTTTG +
Preference number: 5 (lower is better)
Translates to: TVSEFTEIRAWRITT*GAIGVAGCNLWRPL
Trigger: CAAAGGTCTCCACAAGTTGCAGCCAGCCACGCCAATTGCCCCGCAGGTGGTTATTCGCCAAGCCCGAATCTCCGTGAACTCAGATACTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515330.5
CDS CCA 90 bp TGCCACTTTTCAGGCACGAAGGGCCACTTCATTTCCTTTGCCTCCTaGATCAGGGTCCTTAACTCGCTGGGGAGTAAAGCTCTGCAGCGC +
Preference number: 5 (lower is better)
Translates to: CHFSGTKGHFISFAS*IRVLNSLGSKALQR
Trigger: GCGCTGCAGAGCTTTACTCCCCAGCGAGTTAAGGACCCTGATCCAGGAGGCAAAGGAAATGAAGTGGCCCTTCGTGCCTGAAAAGTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000505127.5
ENST00000509688.5
ENST00000515330.5
ENST00000650871.1
CDS-3UTR CAA 90 bp GCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGATGATTACGATGAATaGGGTGTCCCTGGGTCTAGG +
Preference number: 5 (lower is better)
Translates to: ANHWPEPVSRPCPSPKGPDDYDE*GVPGSR
Trigger: CCTAGACCCAGGGACACCCAATTCATCGTAATCATC...TGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp AAGCAGCGGTCTCCTGACCCATTCTTGATAACTGTGGCAGAGGGAAAGAGGCTCGGGCCCACGGCTTGTTaGTACTGCCACTTTTCAGGC +
Preference number: 5 (lower is better)
Translates to: KQRSPDPFLITVAEGKRLGPTAC*YCHFSG
Trigger: GCCTGAAAAGTGGCAGTACAAACAAGCCGTGGGCCC...GAGCCTCTTTCCCTCTGCCACAGTTATCAAGAATGGGTCAGGAGACCGCTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000505127.5
ENST00000650871.1
CDS-3UTR CAA 90 bp CAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGACTGTGCCGTATCCCGTTGCTCCATTGTaGCTTATTAGACTGCTCAGA +
Preference number: 5 (lower is better)
Translates to: QNLCHGPAQAPKDQTVPYPVAPL*LIRLLR
Trigger: TCTGAGCAGTCTAATAAGCAACAATGGAGCAACGGG...ATACGGCACAGTCTGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp CCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAACCACATCCCCAGCTTTaGCAGAATCTGCCCTCTGAT +
Preference number: 5 (lower is better)
Translates to: PLANHWPEPVSRPCPSPKPHPQL*QNLPSD
Trigger: ATCAGAGGGCAGATTCTGCAAAAGCTGGGGATGTGG...TTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp TGGCTTTATAAGCATCTGGCATTTCCCCTGCTGGCACTCATTCTCTCTCCTGCTAAGGCAGCTGCCAGCTaGCAGGCTTCTGCAGCGGAC +
Preference number: 5 (lower is better)
Translates to: WLYKHLAFPLLALILSPAKAAAS*QASAAD
Trigger: GTCCGCTGCAGAAGCCTGCAAGCTGGCAGCTGCCTT...AGCAGGAGAGAGAATGAGTGCCAGCAGGGGAAATGCCAGATGCTTATAAAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CAA 90 bp TCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAGGCTCATCATCTCTCTaGGTGAGGAGGCCAATCTCA +
Preference number: 5 (lower is better)
Translates to: SSCKSLARTCVTALPKPQGSSSL*VRRPIS
Trigger: TGAGATTGGCCTCCTCACCAAGAGAGATGATGAGCC...TTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp TTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACGGCTCATCATCTCTCTaGGTGAGGAGGCCAATCTCA +
Preference number: 5 (lower is better)
Translates to: LQIIGQNLCHGPAQAPKDGSSSL*VRRPIS
Trigger: TGAGATTGGCCTCCTCACCAAGAGAGATGATGAGCC...GTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp AAGCAGCGGTCTCCTGACCCATTCTTGATAACTGTGGCAGAGGGAAAGAGGCTCCCTTACAGAGCTGACTaGCTGCATGGACCGTCCCTG +
Preference number: 5 (lower is better)
Translates to: KQRSPDPFLITVAEGKRLPYRAD*LHGPSL
Trigger: CAGGGACGGTCCATGCAGCAAGTCAGCTCTGTAAGG...GAGCCTCTTTCCCTCTGCCACAGTTATCAAGAATGGGTCAGGAGACCGCTGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CAA 90 bp CAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGACTGTGCCGTATGAGGAAGTGCTGAAATaGTACAGCTTCCCCATTGCT +
Preference number: 5 (lower is better)
Translates to: QNLCHGPAQAPKDQTVPYEEVLK*YSFPIA
Trigger: AGCAATGGGGAAGCTGTACAATTTCAGCACTTCCTC...ATACGGCACAGTCTGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp GCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCACTGCCACTCAGAGACTaGTTGAAAACAGCTCCCTCA +
Preference number: 5 (lower is better)
Translates to: ANHWPEPVSRPCPSPKGPLPLRD*LKTAPS
Trigger: TGAGGGAGCTGTTTTCAACAAGTCTCTGAGTGGCAG...TGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp CAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGACTGTGCCGTATCTAAACCCTGATAAGTaGCTCCAAGCACTGGAAGTC +
Preference number: 5 (lower is better)
Translates to: QNLCHGPAQAPKDQTVPYLNPDK*LQALEV
Trigger: GACTTCCAGTGCTTGGAGCAACTTATCAGGGTTTAG...ATACGGCACAGTCTGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp GCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCATCCACCAGATGTTCTTaGCCAGGCTCTTTTCTGGCT +
Preference number: 5 (lower is better)
Translates to: ANHWPEPVSRPCPSPKGPSTRCS*PGSFLA
Trigger: AGCCAGAAAAGAGCCTGGCAAAGAACATCTGGTGGA...TGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp AAGCAGCGGTCTCCTGACCCATTCTTGATAACTGTGGCAGAGGGAAAGAGGCTCCATGCTGTCGAGCAGTaGCCCCTCCTCATCCACTGT +
Preference number: 5 (lower is better)
Translates to: KQRSPDPFLITVAEGKRLHAVEQ*PLLIHC
Trigger: ACAGTGGATGAGGAGGGGCAACTGCTCGACAGCATG...GAGCCTCTTTCCCTCTGCCACAGTTATCAAGAATGGGTCAGGAGACCGCTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CAA 90 bp TGGCATTTCCCCTGCTGGCACTCATTCTCTCTCCTGCTACCCTATGAAGAGGTGCATGCTGTCGAGCAGTaGCCCCTCCTCATCCACTGT +
Preference number: 5 (lower is better)
Translates to: WHFPCWHSFSLLLPYEEVHAVEQ*PLLIHC
Trigger: ACAGTGGATGAGGAGGGGCAACTGCTCGACAGCATG...CACCTCTTCATAGGGTAGCAGGAGAGAGAATGAGTGCCAGCAGGGGAAATGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CAA 90 bp AAGCAGCGGTCTCCTGACCCATTCTTGATAACTGTGGCAGAGGGAAAGAGGCTCGAGAGCCGTGCCCATTaGTGCAGGGAACATCCATGC +
Preference number: 5 (lower is better)
Translates to: KQRSPDPFLITVAEGKRLESRAH*CREHPC
Trigger: GCATGGATGTTCCCTGCACAAATGGGCACGGCTCTC...GAGCCTCTTTCCCTCTGCCACAGTTATCAAGAATGGGTCAGGAGACCGCTGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CAA 90 bp CAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGTCTCCTGACCCATTCTaGATAACTGTGGCAGAGGGA +
Preference number: 5 (lower is better)
Translates to: QIIGQNLCHGPAQAPKDQSPDPF*ITVAEG
Trigger: TCCCTCTGCCACAGTTATCAAGAATGGGTCAGGAGA...CTGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000650871.1
CDS-3UTR CAA 90 bp TCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAATCCCTCATGGGTGAGTaGGGGCTGTTTTCCATGTTG +
Preference number: 5 (lower is better)
Translates to: SSCKSLARTCVTALPKPQSLMGE*GLFSML
Trigger: CAACATGGAAAACAGCCCCAACTCACCCATGAGGGA...TTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000650871.1
CDS-3UTR CAA 90 bp AAGCAGCGGTCTCCTGACCCATTCTTGATAACTGTGGCAGAGGGAAAGAGGCTCTCTTGGCCCACTTGCTaGGACTGTGTAGGGCAGGAG +
Preference number: 5 (lower is better)
Translates to: KQRSPDPFLITVAEGKRLSWPTC*DCVGQE
Trigger: CTCCTGCCCTACACAGTCCAAGCAAGTGGGCCAAGA...GAGCCTCTTTCCCTCTGCCACAGTTATCAAGAATGGGTCAGGAGACCGCTGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458497.6
CDS-3UTR CAA 90 bp TCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAGATGATTACGATGAATaGGGTGTCCCTGGGTCTAGG +
Preference number: 5 (lower is better)
Translates to: SSCKSLARTCVTALPKPQDDYDE*GVPGSR
Trigger: CCTAGACCCAGGGACACCCAATTCATCGTAATCATC...TTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp GAAGTGGTGCCAGAGCCCCTTCTGCTCCTTATAGTCTTTCCCAACATACCTCCCGCCACTTCATTTCCTTaGCCTCCTGGATCAGGGTCC +
Preference number: 5 (lower is better)
Translates to: EVVPEPLLLLIVFPNIPPATSFP*PPGSGS
Trigger: GGACCCTGATCCAGGAGGCAAAGGAAATGAAGTGGC...GGGAGGTATGTTGGGAAAGACTATAAGGAGCAGAAGGGGCTCTGGCACCACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505127.5
CDS-3UTR CAA 90 bp TGGGGCTGTTTTCCATGTTGCTTTCCTTGCAGGACTTATGCCCAGAAGCAGCGGCTCTGGGCCCACGGCTaGTTTGTACTGCCACTTTTC +
Preference number: 5 (lower is better)
Translates to: WGCFPCCFPCRTYAQKQRLWAHG*FVLPLF
Trigger: GAAAAGTGGCAGTACAAACAAGCCGTGGGCCCAGAG...CCGCTGCTTCTGGGCATAAGTCCTGCAAGGAAAGCAACATGGAAAACAGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000505127.5
ENST00000650871.1
CDS-3UTR CAA 90 bp TGGGGCTGTTTTCCATGTTGCTTTCCTTGCAGGACTTATGCCCAGAAGCAGCGGTCCTTCAGGTTTGTTTaGTCCTCTGGGCCCACGGCT +
Preference number: 5 (lower is better)
Translates to: WGCFPCCFPCRTYAQKQRSFRFV*SSGPTA
Trigger: AGCCGTGGGCCCAGAGGACAAAACAAACCTGAAGGA...CCGCTGCTTCTGGGCATAAGTCCTGCAAGGAAAGCAACATGGAAAACAGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000505127.5
ENST00000650871.1
CDS-3UTR CAA 90 bp CCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAATCACATCCTTCAGGTTaGTTTTGTCCTCTGGGCCCA +
Preference number: 5 (lower is better)
Translates to: PLANHWPEPVSRPCPSPKSHPSG*FCPLGP
Trigger: TGGGCCCAGAGGACAAAACAAACCTGAAGGATGTGA...TTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000505127.5
ENST00000650871.1
CDS-3UTR CAA 90 bp GCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAAACTTGTGGAGACCTTaGGCGACCTGCAGAAGTTTT +
Preference number: 5 (lower is better)
Translates to: ANHWPEPVSRPCPSPKGPNLWRP*ATCRSF
Trigger: AAAACTTCTGCAGGTCGCCAAAGGTCTCCACAAGTT...TGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp TGGCTTTATAAGCATCTGGCATTTCCCCTGCTGGCACTCATTCTCTCTCCTGCTCACGGAGATTCGGGCTaGGCGAATAACCACCTGCGG +
Preference number: 5 (lower is better)
Translates to: WLYKHLAFPLLALILSPAHGDSG*ANNHLR
Trigger: CCGCAGGTGGTTATTCGCCAAGCCCGAATCTCCGTG...AGCAGGAGAGAGAATGAGTGCCAGCAGGGGAAATGCCAGATGCTTATAAAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CAA 90 bp CAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGGTACCCGTTGCTCCATaGTTGCTTATTAGACTGCTC +
Preference number: 5 (lower is better)
Translates to: QIIGQNLCHGPAQAPKDQVPVAP*LLIRLL
Trigger: GAGCAGTCTAATAAGCAACAATGGAGCAACGGGTAC...CTGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp CAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGGACTGCACCAGGACCTaGTCACTTTCATTTCTGTAC +
Preference number: 5 (lower is better)
Translates to: QIIGQNLCHGPAQAPKDQDCTRT*SLSFLY
Trigger: GTACAGAAATGAAAGTGACAAGGTCCTGGTGCAGTC...CTGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp GCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGACTGCACCAGGACCTaGTCACTTTCATTTCTGTAC +
Preference number: 5 (lower is better)
Translates to: ANHWPEPVSRPCPSPKGPDCTRT*SLSFLY
Trigger: GTACAGAAATGAAAGTGACAAGGTCCTGGTGCAGTC...TGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp GCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGGTGTCAAGGATTTTTaGGAAATCCCCTTGCCCATG +
Preference number: 5 (lower is better)
Translates to: ANHWPEPVSRPCPSPKGPGVKDF*EIPLPM
Trigger: CATGGGCAAGGGGATTTCCAAAAAATCCTTGACACC...TGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp GCCCCTCCTCATCCACTGTGGAGGCATCAGGGTCGATGCCCTGCTCTGCGACTGTATTCCTGTGTCTCTTaGACAATGTGGCTTTTCTTG +
Preference number: 5 (lower is better)
Translates to: APPHPLWRHQGRCPALRLYSCVS*TMWLFL
Trigger: CAAGAAAAGCCACATTGTCAAAGAGACACAGGAATA...CAGTCGCAGAGCAGGGCATCGACCCTGATGCCTCCACAGTGGATGAGGAGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509722.5
CDS-3UTR CAA 90 bp TGCTGTGCGGTCATCTGTCGCTCCACATCAGTGAAGTGGTGCCAGAGCCCCTTCCTCAGTCTCCACATCTaGATCCAAGGAGACTCGAAA +
Preference number: 5 (lower is better)
Translates to: CCAVICRSTSVKWCQSPFLSLHI*IQGDSK
Trigger: TTTCGAGTCTCCTTGGATCAAGATGTGGAGACTGAG...GAAGGGGCTCTGGCACCACTTCACTGATGTGGAGCGACAGATGACCGCACAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509722.5
CDS-3UTR CAA 90 bp TTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCTGCCACTCAGAGACTaGTTGAAAACAGCTCCCTCA +
Preference number: 5 (lower is better)
Translates to: LQIIGQNLCHGPAQAPKDLPLRD*LKTAPS
Trigger: TGAGGGAGCTGTTTTCAACAAGTCTCTGAGTGGCAG...GTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp CAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGACTGTGCCGTATTTGCTGTGGCTGATTTaGAGAAGGCTCCAAATTGTC +
Preference number: 5 (lower is better)
Translates to: QNLCHGPAQAPKDQTVPYLLWLI*RRLQIV
Trigger: GACAATTTGGAGCCTTCTCAAAATCAGCCACAGCAA...ATACGGCACAGTCTGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp TTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACTTCCCCTGCCTGTCTTaGACATCGCAGTTGGTTTCT +
Preference number: 5 (lower is better)
Translates to: LQIIGQNLCHGPAQAPKDFPCLS*TSQLVS
Trigger: AGAAACCAACTGCGATGTCAAAGACAGGCAGGGGAA...GTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp CAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGTCTGGAGTCAGGATTTaGAACAGGCCAATTAGGGGT +
Preference number: 5 (lower is better)
Translates to: QIIGQNLCHGPAQAPKDQSGVRI*NRPIRG
Trigger: ACCCCTAATTGGCCTGTTCAAAATCCTGACTCCAGA...CTGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp CCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAATCCTCTTGCAAATCATaGGCCAGAACCTGTGTCACG +
Preference number: 5 (lower is better)
Translates to: PLANHWPEPVSRPCPSPKSSCKS*ARTCVT
Trigger: CGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGA...TTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS GCA 90 bp GGGGATATCAGAGGAACAGGTGGTGTGGCTCTTCCTACCAGTAACTaGTGCAACCCGGCGCCAATCACATCCTTCAGGTTTGTTTTGTCC +
Preference number: 5 (lower is better)
Translates to: GDIRGTGGVALPTSN*CNPAPITSFRFVLS
Trigger: GGACAAAACAAACCTGAAGGATGTGATTGGCGCCGGGTTGCAGCAGTTACTGGTAGGAAGAGCCACACCACCTGTTCCTCTGATATCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509688.5
CDS-3UTR CAA 90 bp CAGCTTGCAGGCTTCTGCAGCGGACAGCAAATGGTGGTCAAACTCCTTCAGCAGGATGATTACGATGAATaGGGTGTCCCTGGGTCTAGG +
Preference number: 5 (lower is better)
Translates to: QLAGFCSGQQMVVKLLQQDDYDE*GVPGSR
Trigger: CCTAGACCCAGGGACACCCAATTCATCGTAATCATC...CTGCTGAAGGAGTTTGACCACCATTTGCTGTCCGCTGCAGAAGCCTGCAAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509722.5
CDS-3UTR CAA 90 bp GCAGAGGGAAAGAGGCTCTGCAGGATCTTGTGCTGCCAATTAAATGCAGGACTTCGCTGGTCCTCGCTCTaGTCCTCTTCCGACACATCT +
Preference number: 5 (lower is better)
Translates to: AEGKRLCRILCCQLNAGLRWSSL*SSSDTS
Trigger: AGATGTGTCGGAAGAGGACAAGAGCGAGGACCAGCG...AAGTCCTGCATTTAATTGGCAGCACAAGATCCTGCAGAGCCTCTTTCCCTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp GATACTGATCAATTCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGTGGCTGGCTGCAACTaGTGGAGACCTTTGGCGACC +
Preference number: 5 (lower is better)
Translates to: DTDQFLLQIIGQNLCHGPVAGCN*WRPLAT
Trigger: GGTCGCCAAAGGTCTCCACAAGTTGCAGCCAGCCAC...AGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAGTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp TTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCCCGTTGCTCCATTGTaGCTTATTAGACTGCTCAGA +
Preference number: 5 (lower is better)
Translates to: LQIIGQNLCHGPAQAPKDPVAPL*LIRLLR
Trigger: TCTGAGCAGTCTAATAAGCAACAATGGAGCAACGGG...GTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp CCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGTACCCGTTGCTCCATaGTTGCTTATTAGACTGCTC +
Preference number: 5 (lower is better)
Translates to: PLANHWPEPVSRPCPSPKVPVAP*LLIRLL
Trigger: GAGCAGTCTAATAAGCAACAATGGAGCAACGGGTAC...TTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp TCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAGTACCCGTTGCTCCATaGTTGCTTATTAGACTGCTC +
Preference number: 5 (lower is better)
Translates to: SSCKSLARTCVTALPKPQVPVAP*LLIRLL
Trigger: GAGCAGTCTAATAAGCAACAATGGAGCAACGGGTAC...TTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp CCCTGCTGGCACTCATTCTCTCTCCTGCTACCCTATGAAGAGGTGCCTTCTGCCGACTGCACCAGGACCTaGTCACTTTCATTTCTGTAC +
Preference number: 5 (lower is better)
Translates to: PCWHSFSLLLPYEEVPSADCTRT*SLSFLY
Trigger: GTACAGAAATGAAAGTGACAAGGTCCTGGTGCAGTC...GGCAGAAGGCACCTCTTCATAGGGTAGCAGGAGAGAGAATGAGTGCCAGCAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CAA 90 bp CAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGATCTCAAAGGCCTCTTaGGCTTCACACAGATGTAAG +
Preference number: 5 (lower is better)
Translates to: QIIGQNLCHGPAQAPKDQISKAS*ASHRCK
Trigger: CTTACATCTGTGTGAAGCCAAAGAGGCCTTTGAGAT...CTGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp TGGGGCTGTTTTCCATGTTGCTTTCCTTGCAGGACTTATGCCCAGAAGCAGCGGGGCTCATCATCTCTCTaGGTGAGGAGGCCAATCTCA +
Preference number: 5 (lower is better)
Translates to: WGCFPCCFPCRTYAQKQRGSSSL*VRRPIS
Trigger: TGAGATTGGCCTCCTCACCAAGAGAGATGATGAGCC...CCGCTGCTTCTGGGCATAAGTCCTGCAAGGAAAGCAACATGGAAAACAGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CAA 90 bp TGGCTTTATAAGCATCTGGCATTTCCCCTGCTGGCACTCATTCTCTCTCCTGCTCCTTACAGAGCTGACTaGCTGCATGGACCGTCCCTG +
Preference number: 5 (lower is better)
Translates to: WLYKHLAFPLLALILSPAPYRAD*LHGPSL
Trigger: CAGGGACGGTCCATGCAGCAAGTCAGCTCTGTAAGG...AGCAGGAGAGAGAATGAGTGCCAGCAGGGGAAATGCCAGATGCTTATAAAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CAA 90 bp GCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCACACAGACATAACTTCTaGAGACAGAGCTTCTCTGTC +
Preference number: 5 (lower is better)
Translates to: ANHWPEPVSRPCPSPKGPHRHNF*RQSFSV
Trigger: GACAGAGAAGCTCTGTCTCAAGAAGTTATGTCTGTG...TGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp TTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACTGTGTGCCCATATTCTaGGGCCTACCAGAATCAGAA +
Preference number: 5 (lower is better)
Translates to: LQIIGQNLCHGPAQAPKDCVPIF*GLPESE
Trigger: TTCTGATTCTGGTAGGCCCAAGAATATGGGCACACA...GTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp TCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAATCTGGAGTCAGGATTTaGAACAGGCCAATTAGGGGT +
Preference number: 5 (lower is better)
Translates to: SSCKSLARTCVTALPKPQSGVRI*NRPIRG
Trigger: ACCCCTAATTGGCCTGTTCAAAATCCTGACTCCAGA...TTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp CCCTGCTGGCACTCATTCTCTCTCCTGCTACCCTATGAAGAGGTGCCTTCTGCCTCTGGAGTCAGGATTTaGAACAGGCCAATTAGGGGT +
Preference number: 5 (lower is better)
Translates to: PCWHSFSLLLPYEEVPSASGVRI*NRPIRG
Trigger: ACCCCTAATTGGCCTGTTCAAAATCCTGACTCCAGA...GGCAGAAGGCACCTCTTCATAGGGTAGCAGGAGAGAGAATGAGTGCCAGCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CAA 90 bp AATTCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCTTCAAAGTCATCAGGTaGCAAGGTGCGAGCCTCAAG +
Preference number: 5 (lower is better)
Translates to: NSSCKSLARTCVTALPKPFKVIR*QGASLK
Trigger: CTTGAGGCTCGCACCTTGCAACCTGATGACTTTGAA...GGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp CCCACTGTCCACCCTCTGATAAGCCCTGGTGTGTGTTGTTCCCTCTATGTGTCCTCTCCTGACCCATTCTaGATAACTGTGGCAGAGGGA +
Preference number: 5 (lower is better)
Translates to: PTVHPLISPGVCCSLYVSSPDPF*ITVAEG
Trigger: TCCCTCTGCCACAGTTATCAAGAATGGGTCAGGAGA...GGACACATAGAGGGAACAACACACACCAGGGCTTATCAGAGGGTGGACAGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CAA 90 bp AATTCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCTCTCCTGACCCATTCTaGATAACTGTGGCAGAGGGA +
Preference number: 5 (lower is better)
Translates to: NSSCKSLARTCVTALPKPSPDPF*ITVAEG
Trigger: TCCCTCTGCCACAGTTATCAAGAATGGGTCAGGAGA...GGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000650871.1
CDS-3UTR CAA 90 bp TGGGGCTGTTTTCCATGTTGCTTTCCTTGCAGGACTTATGCCCAGAAGCAGCGGTCCCTCATGGGTGAGTaGGGGCTGTTTTCCATGTTG +
Preference number: 5 (lower is better)
Translates to: WGCFPCCFPCRTYAQKQRSLMGE*GLFSML
Trigger: CAACATGGAAAACAGCCCCAACTCACCCATGAGGGA...CCGCTGCTTCTGGGCATAAGTCCTGCAAGGAAAGCAACATGGAAAACAGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000650871.1
CDS GCA 90 bp TCCTTCAGGTTTGTTTTGTCCTCTGGGCCCACGGCTTGTTTGTACTaGCACTTTTCAGGCACGAAGGGCCACTTCATTTCCTTTGCCTCC +
Preference number: 5 (lower is better)
Translates to: SFRFVLSSGPTACLY*HFSGTKGHFISFAS
Trigger: GGAGGCAAAGGAAATGAAGTGGCCCTTCGTGCCTGAAAAGTGGCAGTACAAACAAGCCGTGGGCCCAGAGGACAAAACAAACCTGAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000505127.5
ENST00000509688.5
ENST00000515330.5
ENST00000650871.1
CDS-3UTR CAA 90 bp GATACTGATCAATTCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGGGCCCACGGCTTGTTaGTACTGCCACTTTTCAGGC +
Preference number: 5 (lower is better)
Translates to: DTDQFLLQIIGQNLCHGPGPTAC*YCHFSG
Trigger: GCCTGAAAAGTGGCAGTACAAACAAGCCGTGGGCCC...AGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAGTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000505127.5
ENST00000650871.1
CDS-3UTR CAA 90 bp GCAGAGGGAAAGAGGCTCTGCAGGATCTTGTGCTGCCAATTAAATGCAGGACTTTCCTTCAGGTTTGTTTaGTCCTCTGGGCCCACGGCT +
Preference number: 5 (lower is better)
Translates to: AEGKRLCRILCCQLNAGLSFRFV*SSGPTA
Trigger: AGCCGTGGGCCCAGAGGACAAAACAAACCTGAAGGA...AAGTCCTGCATTTAATTGGCAGCACAAGATCCTGCAGAGCCTCTTTCCCTCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000505127.5
ENST00000650871.1
CDS-3UTR CAA 90 bp AAGCAGCGGTCTCCTGACCCATTCTTGATAACTGTGGCAGAGGGAAAGAGGCTCTCACATCCTTCAGGTTaGTTTTGTCCTCTGGGCCCA +
Preference number: 5 (lower is better)
Translates to: KQRSPDPFLITVAEGKRLSHPSG*FCPLGP
Trigger: TGGGCCCAGAGGACAAAACAAACCTGAAGGATGTGA...GAGCCTCTTTCCCTCTGCCACAGTTATCAAGAATGGGTCAGGAGACCGCTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000505127.5
ENST00000650871.1
CDS-3UTR CAA 90 bp GAAAGCAGCTTTGACAAAGCTGTGAAGCTCCTGTTTTCCAGTAACAGGCTCATCGTGGCTGGCTGCAACTaGTGGAGACCTTTGGCGACC +
Preference number: 5 (lower is better)
Translates to: ESSFDKAVKLLFSSNRLIVAGCN*WRPLAT
Trigger: GGTCGCCAAAGGTCTCCACAAGTTGCAGCCAGCCAC...GATGAGCCTGTTACTGGAAAACAGGAGCTTCACAGCTTTGTCAAAGCTGCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509722.5
CDS-3UTR CAA 90 bp TCATTTCTGTACAGCCAGGTACCCGTTGCTCCATTGTTGCTTATTAGACTGCTCCACGGAGATTCGGGCTaGGCGAATAACCACCTGCGG +
Preference number: 5 (lower is better)
Translates to: SFLYSQVPVAPLLLIRLLHGDSG*ANNHLR
Trigger: CCGCAGGTGGTTATTCGCCAAGCCCGAATCTCCGTG...GAGCAGTCTAATAAGCAACAATGGAGCAACGGGTACCTGGCTGTACAGAAATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515330.5
CDS-3UTR CAA 90 bp CCTCTGACCAGGCGGCTGTCTCAGAATGCACAGTCTATGAGAGCCGTGCCCATTCACAGACATAACTTCTaGAGACAGAGCTTCTCTGTC +
Preference number: 5 (lower is better)
Translates to: PLTRRLSQNAQSMRAVPIHRHNF*RQSFSV
Trigger: GACAGAGAAGCTCTGTCTCAAGAAGTTATGTCTGTG...AATGGGCACGGCTCTCATAGACTGTGCATTCTGAGACAGCCGCCTGGTCAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509722.5
CDS-3UTR CAA 90 bp CAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGACTGTGCCGTATTTTTTGGAAATCCCCTaGCCCATGCAAGATAAGTTT +
Preference number: 5 (lower is better)
Translates to: QNLCHGPAQAPKDQTVPYFLEIP*PMQDKF
Trigger: AAACTTATCTTGCATGGGCAAGGGGATTTCCAAAAA...ATACGGCACAGTCTGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp AATTCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCGGTGTCAAGGATTTTTaGGAAATCCCCTTGCCCATG +
Preference number: 5 (lower is better)
Translates to: NSSCKSLARTCVTALPKPGVKDF*EIPLPM
Trigger: CATGGGCAAGGGGATTTCCAAAAAATCCTTGACACC...GGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGAATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp CCCACTGTCCACCCTCTGATAAGCCCTGGTGTGTGTTGTTCCCTCTATGTGTCCCTCAGTCTCCACATCTaGATCCAAGGAGACTCGAAA +
Preference number: 5 (lower is better)
Translates to: PTVHPLISPGVCCSLYVSLSLHI*IQGDSK
Trigger: TTTCGAGTCTCCTTGGATCAAGATGTGGAGACTGAG...GGACACATAGAGGGAACAACACACACCAGGGCTTATCAGAGGGTGGACAGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CAA 90 bp AAGCAGCGGTCTCCTGACCCATTCTTGATAACTGTGGCAGAGGGAAAGAGGCTCCTGCCACTCAGAGACTaGTTGAAAACAGCTCCCTCA +
Preference number: 5 (lower is better)
Translates to: KQRSPDPFLITVAEGKRLLPLRD*LKTAPS
Trigger: TGAGGGAGCTGTTTTCAACAAGTCTCTGAGTGGCAG...GAGCCTCTTTCCCTCTGCCACAGTTATCAAGAATGGGTCAGGAGACCGCTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CAA 90 bp CAGCTTGCAGGCTTCTGCAGCGGACAGCAAATGGTGGTCAAACTCCTTCAGCAGCTAAACCCTGATAAGTaGCTCCAAGCACTGGAAGTC +
Preference number: 5 (lower is better)
Translates to: QLAGFCSGQQMVVKLLQQLNPDK*LQALEV
Trigger: GACTTCCAGTGCTTGGAGCAACTTATCAGGGTTTAG...CTGCTGAAGGAGTTTGACCACCATTTGCTGTCCGCTGCAGAAGCCTGCAAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509722.5
CDS-3UTR CAA 90 bp AAGCAGCGGTCTCCTGACCCATTCTTGATAACTGTGGCAGAGGGAAAGAGGCTCTCCACCAGATGTTCTTaGCCAGGCTCTTTTCTGGCT +
Preference number: 5 (lower is better)
Translates to: KQRSPDPFLITVAEGKRLSTRCS*PGSFLA
Trigger: AGCCAGAAAAGAGCCTGGCAAAGAACATCTGGTGGA...GAGCCTCTTTCCCTCTGCCACAGTTATCAAGAATGGGTCAGGAGACCGCTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CAA 90 bp TGGCATTTCCCCTGCTGGCACTCATTCTCTCTCCTGCTACCCTATGAAGAGGTGTCCTCTTGCAAATCATaGGCCAGAACCTGTGTCACG +
Preference number: 5 (lower is better)
Translates to: WHFPCWHSFSLLLPYEEVSSCKS*ARTCVT
Trigger: CGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGA...CACCTCTTCATAGGGTAGCAGGAGAGAGAATGAGTGCCAGCAGGGGAAATGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CAA 90 bp AAGCAGCGGTCTCCTGACCCATTCTTGATAACTGTGGCAGAGGGAAAGAGGCTCTCTCCTGACCCATTCTaGATAACTGTGGCAGAGGGA +
Preference number: 5 (lower is better)
Translates to: KQRSPDPFLITVAEGKRLSPDPF*ITVAEG
Trigger: TCCCTCTGCCACAGTTATCAAGAATGGGTCAGGAGA...GAGCCTCTTTCCCTCTGCCACAGTTATCAAGAATGGGTCAGGAGACCGCTGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000650871.1
CDS TCA 90 bp CTGCTGCTTCGTACCACATCCCCAGCTTTTGCAGAATCTGCCCTCTaGTCTGTATACAGACCGACTGCACCAGGACCTTGTCACTTTCAT +
Preference number: 5 (lower is better)
Translates to: LLLRTTSPAFAESAL*SVYRPTAPGPCHFH
Trigger: ATGAAAGTGACAAGGTCCTGGTGCAGTCGGTCTGTATACAGATCAGAGGGCAGATTCTGCAAAAGCTGGGGATGTGGTACGAAGCAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000508589.1
ENST00000509722.5
ENST00000650871.1
CDS GCA 90 bp CCCAGCTTTTGCAGAATCTGCCCTCTGATCTGTATACAGACCGACTaGACCAGGACCTTGTCACTTTCATTTCTGTACAGCCAGGTACCC +
Preference number: 5 (lower is better)
Translates to: PSFCRICPLICIQTD*TRTLSLSFLYSQVP
Trigger: GGGTACCTGGCTGTACAGAAATGAAAGTGACAAGGTCCTGGTGCAGTCGGTCTGTATACAGATCAGAGGGCAGATTCTGCAAAAGCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000504745.1
ENST00000505127.5
ENST00000509209.1
ENST00000509722.5
ENST00000650871.1
CDS GCA 90 bp GATATCAGAGGAACAGGTGGTGTGGCTCTTCCTACCAGTAACTGCTaGAACCCGGCGCCAATCACATCCTTCAGGTTTGTTTTGTCCTCT +
Preference number: 5 (lower is better)
Translates to: DIRGTGGVALPTSNC*NPAPITSFRFVLSS
Trigger: AGAGGACAAAACAAACCTGAAGGATGTGATTGGCGCCGGGTTGCAGCAGTTACTGGTAGGAAGAGCCACACCACCTGTTCCTCTGATATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509688.5
CDS GCA 90 bp ACCCTCTCCACTATATCCCCATTCAGTCTCTCTGCCCTTCCCCCTTaGTTGCCACTCTACTCTTTCCTGCAAACAGTGGCTCTCAAACTT +
Preference number: 5 (lower is better)
Translates to: TLSTISPFSLSALPP*LPLYSFLQTVALKL
Trigger: AAGTTTGAGAGCCACTGTTTGCAGGAAAGAGTAGAGTGGCAAGCAAGGGGGAAGGGCAGAGAGACTGAATGGGGATATAGTGGAGAGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509688.5
CDS GCA 90 bp ACTCCTTACCTTGACCCTCTCCACTATATCCCCATTCAGTCTCTCTaGCCTTCCCCCTTGCTTGCCACTCTACTCTTTCCTGCAAACAGT +
Preference number: 5 (lower is better)
Translates to: TPYLDPLHYIPIQSL*PSPLLATLLFPANS
Trigger: ACTGTTTGCAGGAAAGAGTAGAGTGGCAAGCAAGGGGGAAGGGCAGAGAGACTGAATGGGGATATAGTGGAGAGGGTCAAGGTAAGGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509688.5
CDS-3UTR CAA 90 bp CATTTCTGTACAGCCAGGTACCCGTTGCTCCATTGTTGCTTATTAGACTGCTCAGGGCCCACGGCTTGTTaGTACTGCCACTTTTCAGGC +
Preference number: 5 (lower is better)
Translates to: HFCTARYPLLHCCLLDCSGPTAC*YCHFSG
Trigger: GCCTGAAAAGTGGCAGTACAAACAAGCCGTGGGCCC...TGAGCAGTCTAATAAGCAACAATGGAGCAACGGGTACCTGGCTGTACAGAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515330.5
CDS-3UTR CAA 90 bp AAGCAGCGGTCTCCTGACCCATTCTTGATAACTGTGGCAGAGGGAAAGAGGCTCAACTTGTGGAGACCTTaGGCGACCTGCAGAAGTTTT +
Preference number: 5 (lower is better)
Translates to: KQRSPDPFLITVAEGKRLNLWRP*ATCRSF
Trigger: AAAACTTCTGCAGGTCGCCAAAGGTCTCCACAAGTT...GAGCCTCTTTCCCTCTGCCACAGTTATCAAGAATGGGTCAGGAGACCGCTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000650871.1
CDS-3UTR CAA 90 bp AAAATAATGGCCTCCAGCTCTATCCATGTCCCTGCAAAGGACATGATCTCATTCGTGGCTGGCTGCAACTaGTGGAGACCTTTGGCGACC +
Preference number: 5 (lower is better)
Translates to: KIMASSSIHVPAKDMISFVAGCN*WRPLAT
Trigger: GGTCGCCAAAGGTCTCCACAAGTTGCAGCCAGCCAC...GAATGAGATCATGTCCTTTGCAGGGACATGGATAGAGCTGGAGGCCATTATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CAA 90 bp CCTGAGGTCTCCCCAGCCATGTGGAACTGTGAGTTAATTAAACCTCTTTTCTTTGTGGCTGGCTGCAACTaGTGGAGACCTTTGGCGACC +
Preference number: 5 (lower is better)
Translates to: PEVSPAMWNCELIKPLFFVAGCN*WRPLAT
Trigger: GGTCGCCAAAGGTCTCCACAAGTTGCAGCCAGCCAC...AAAGAAAAGAGGTTTAATTAACTCACAGTTCCACATGGCTGGGGAGACCTCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CAA 90 bp AAGCAGCGGTCTCCTGACCCATTCTTGATAACTGTGGCAGAGGGAAAGAGGCTCACAGCCAGGTACCCGTaGCTCCATTGTTGCTTATTA +
Preference number: 5 (lower is better)
Translates to: KQRSPDPFLITVAEGKRLTARYP*LHCCLL
Trigger: TAATAAGCAACAATGGAGCAACGGGTACCTGGCTGT...GAGCCTCTTTCCCTCTGCCACAGTTATCAAGAATGGGTCAGGAGACCGCTGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000650871.1
CDS-3UTR CAA 90 bp GCAGGACTTAAAGTGATACTGATCAATTCCTCTTGCAAATCATTGGCCAGAACCAAGGCAGCTGCCAGCTaGCAGGCTTCTGCAGCGGAC +
Preference number: 5 (lower is better)
Translates to: AGLKVILINSSCKSLARTKAAAS*QASAAD
Trigger: GTCCGCTGCAGAAGCCTGCAAGCTGGCAGCTGCCTT...GGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAGTATCACTTTAAGTCCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp CAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGACAATGTGGCTTTTCTaGAGTAGTACTCACAGTATC +
Preference number: 5 (lower is better)
Translates to: QIIGQNLCHGPAQAPKDQTMWLF*SSTHSI
Trigger: GATACTGTGAGTACTACTCAAGAAAAGCCACATTGT...CTGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp CAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGTATTCCTGTGTCTCTTaGACAATGTGGCTTTTCTTG +
Preference number: 5 (lower is better)
Translates to: QIIGQNLCHGPAQAPKDQYSCVS*TMWLFL
Trigger: CAAGAAAAGCCACATTGTCAAAGAGACACAGGAATA...CTGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp AAGCAGCGGTCTCCTGACCCATTCTTGATAACTGTGGCAGAGGGAAAGAGGCTCCTAAACCCTGATAAGTaGCTCCAAGCACTGGAAGTC +
Preference number: 5 (lower is better)
Translates to: KQRSPDPFLITVAEGKRLLNPDK*LQALEV
Trigger: GACTTCCAGTGCTTGGAGCAACTTATCAGGGTTTAG...GAGCCTCTTTCCCTCTGCCACAGTTATCAAGAATGGGTCAGGAGACCGCTGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CAA 90 bp CCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAATCTTTGACATCGCAGTaGGTTTCTGGAAACTCAACA +
Preference number: 5 (lower is better)
Translates to: PLANHWPEPVSRPCPSPKSLTSQ*VSGNST
Trigger: TGTTGAGTTTCCAGAAACCAACTGCGATGTCAAAGA...TTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp TTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACTCTTTGACATCGCAGTaGGTTTCTGGAAACTCAACA +
Preference number: 5 (lower is better)
Translates to: LQIIGQNLCHGPAQAPKDSLTSQ*VSGNST
Trigger: TGTTGAGTTTCCAGAAACCAACTGCGATGTCAAAGA...GTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp GCAGAGGGAAAGAGGCTCTGCAGGATCTTGTGCTGCCAATTAAATGCAGGACTTATGTGCTCGGTGGAGTaGACTGGGCTTAAAAACCCC +
Preference number: 5 (lower is better)
Translates to: AEGKRLCRILCCQLNAGLMCSVE*TGLKNP
Trigger: GGGGTTTTTAAGCCCAGTCAACTCCACCGAGCACAT...AAGTCCTGCATTTAATTGGCAGCACAAGATCCTGCAGAGCCTCTTTCCCTCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp TGGGGCTGTTTTCCATGTTGCTTTCCTTGCAGGACTTATGCCCAGAAGCAGCGGGGGCTGTTTTCCATGTaGCTTTCCTTGCAGGACTTA +
Preference number: 5 (lower is better)
Translates to: WGCFPCCFPCRTYAQKQRGLFSM*LSLQDL
Trigger: TAAGTCCTGCAAGGAAAGCAACATGGAAAACAGCCC...CCGCTGCTTCTGGGCATAAGTCCTGCAAGGAAAGCAACATGGAAAACAGCCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000650871.1
CDS-3UTR CAA 90 bp GCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCACCAGTAGTATCAGTCTaGACAGATAGTGACAAAAAG +
Preference number: 5 (lower is better)
Translates to: ANHWPEPVSRPCPSPKGPPVVSV*TDSDKK
Trigger: CTTTTTGTCACTATCTGTCAAGACTGATACTACTGG...TGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000650871.1
CDS-3UTR CAA 90 bp CAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGCCAGTAGTATCAGTCTaGACAGATAGTGACAAAAAG +
Preference number: 5 (lower is better)
Translates to: QIIGQNLCHGPAQAPKDQPVVSV*TDSDKK
Trigger: CTTTTTGTCACTATCTGTCAAGACTGATACTACTGG...CTGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000650871.1
CDS-3UTR CAA 90 bp CAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCAGACTGTGCCGTATAGACAGGAAAACAAATaGAATTCGTATCACAAAGGC +
Preference number: 5 (lower is better)
Translates to: QNLCHGPAQAPKDQTVPYRQENK*NSYHKG
Trigger: GCCTTTGTGATACGAATTCAATTTGTTTTCCTGTCT...ATACGGCACAGTCTGGTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000650871.1
CDS TCA 90 bp TTGAATGAAGTGGTGGAGGAGTCCTTCAAAGGATACGATGAACCGTaGACCCCACTGTCTGAATTTACCAGGTCTCAGCACGTCAGTCCC +
Preference number: 5 (lower is better)
Translates to: LNEVVEESFKGYDEP*TPLSEFTRSQHVSP
Trigger: GGGACTGACGTGCTGAGACCTGGTAAATTCAGACAGTGGGGTTCACGGTTCATCGTATCCTTTGAAGGACTCCTCCACCACTTCATTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502366.5
ENST00000505176.5
CDS GCA 90 bp CCCAGCTTTTGCAGAATCTGCCCTCTGATCTGTATACAGACCGACTaGACCAGGACCTTGTCACTTTCATTTCTGTACAGCCAGGTACCA +
Preference number: 5 (lower is better)
Translates to: PSFCRICPLICIQTD*TRTLSLSFLYSQVP
Trigger: TGGTACCTGGCTGTACAGAAATGAAAGTGACAAGGTCCTGGTGCAGTCGGTCTGTATACAGATCAGAGGGCAGATTCTGCAAAAGCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508589.1
CDS GCA 90 bp CCCCAGAATCAAAGCCTGAATCCTGAGCTGCAATCTGAGTTCCTGTaGTACTCCCCAGGCTCTCTTCTATCTGGCATAGAAGTACCAGTT +
Preference number: 5 (lower is better)
Translates to: PQNQSLNPELQSEFL*YSPGSLLSGIEVPV
Trigger: AACTGGTACTTCTATGCCAGATAGAAGAGAGCCTGGGGAGTAGCACAGGAACTCAGATTGCAGCTCAGGATTCAGGCTTTGATTCTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509688.5
CDS-3UTR CAA 90 bp GCAGAGGGAAAGAGGCTCTGCAGGATCTTGTGCTGCCAATTAAATGCAGGACTTGATGATTACGATGAATaGGGTGTCCCTGGGTCTAGG +
Preference number: 5 (lower is better)
Translates to: AEGKRLCRILCCQLNAGLDDYDE*GVPGSR
Trigger: CCTAGACCCAGGGACACCCAATTCATCGTAATCATC...AAGTCCTGCATTTAATTGGCAGCACAAGATCCTGCAGAGCCTCTTTCCCTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp TCATTTCTGTACAGCCAGGTACCCGTTGCTCCATTGTTGCTTATTAGACTGCTCGCCACTTCATTTCCTTaGCCTCCTGGATCAGGGTCC +
Preference number: 5 (lower is better)
Translates to: SFLYSQVPVAPLLLIRLLATSFP*PPGSGS
Trigger: GGACCCTGATCCAGGAGGCAAAGGAAATGAAGTGGC...GAGCAGTCTAATAAGCAACAATGGAGCAACGGGTACCTGGCTGTACAGAAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515330.5
CDS-3UTR CAA 90 bp CATTTCTGTACAGCCAGGTACCCGTTGCTCCATTGTTGCTTATTAGACTGCTCACTCTGGGCCCACGGCTaGTTTGTACTGCCACTTTTC +
Preference number: 5 (lower is better)
Translates to: HFCTARYPLLHCCLLDCSLWAHG*FVLPLF
Trigger: GAAAAGTGGCAGTACAAACAAGCCGTGGGCCCAGAG...TGAGCAGTCTAATAAGCAACAATGGAGCAACGGGTACCTGGCTGTACAGAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515330.5
CDS-3UTR CAA 90 bp TCATTTCTGTACAGCCAGGTACCCGTTGCTCCATTGTTGCTTATTAGACTGCTCTCCTTCAGGTTTGTTTaGTCCTCTGGGCCCACGGCT +
Preference number: 5 (lower is better)
Translates to: SFLYSQVPVAPLLLIRLLSFRFV*SSGPTA
Trigger: AGCCGTGGGCCCAGAGGACAAAACAAACCTGAAGGA...GAGCAGTCTAATAAGCAACAATGGAGCAACGGGTACCTGGCTGTACAGAAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515330.5
CDS-3UTR CAA 90 bp ACTGTGGCAGAGGGAAAGAGGCTCTGCAGGATCTTGTGCTGCCAATTAAATGCATCACATCCTTCAGGTTaGTTTTGTCCTCTGGGCCCA +
Preference number: 5 (lower is better)
Translates to: TVAEGKRLCRILCCQLNASHPSG*FCPLGP
Trigger: TGGGCCCAGAGGACAAAACAAACCTGAAGGATGTGA...TGCATTTAATTGGCAGCACAAGATCCTGCAGAGCCTCTTTCCCTCTGCCACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000505127.5
ENST00000650871.1
CDS-3UTR CAA 90 bp GATTGTAAGTTTCCTGAGGTCTCCCCAGCCATGTGGAACTGTGAGTTAATTAAACACGGAGATTCGGGCTaGGCGAATAACCACCTGCGG +
Preference number: 5 (lower is better)
Translates to: DCKFPEVSPAMWNCELIKHGDSG*ANNHLR
Trigger: CCGCAGGTGGTTATTCGCCAAGCCCGAATCTCCGTG...TTTAATTAACTCACAGTTCCACATGGCTGGGGAGACCTCAGGAAACTTACAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CAA 90 bp GATACTGATCAATTCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTCCACATCCCCAGCTTTaGCAGAATCTGCCCTCTGAT +
Preference number: 5 (lower is better)
Translates to: DTDQFLLQIIGQNLCHGPPHPQL*QNLPSD
Trigger: ATCAGAGGGCAGATTCTGCAAAAGCTGGGGATGTGG...AGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAGTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp AAGCAGCGGTCTCCTGACCCATTCTTGATAACTGTGGCAGAGGGAAAGAGGCTCATCTCAAAGGCCTCTTaGGCTTCACACAGATGTAAG +
Preference number: 5 (lower is better)
Translates to: KQRSPDPFLITVAEGKRLISKAS*ASHRCK
Trigger: CTTACATCTGTGTGAAGCCAAAGAGGCCTTTGAGAT...GAGCCTCTTTCCCTCTGCCACAGTTATCAAGAATGGGTCAGGAGACCGCTGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CAA 90 bp TGGGGCTGTTTTCCATGTTGCTTTCCTTGCAGGACTTATGCCCAGAAGCAGCGGATCTCAAAGGCCTCTTaGGCTTCACACAGATGTAAG +
Preference number: 5 (lower is better)
Translates to: WGCFPCCFPCRTYAQKQRISKAS*ASHRCK
Trigger: CTTACATCTGTGTGAAGCCAAAGAGGCCTTTGAGAT...CCGCTGCTTCTGGGCATAAGTCCTGCAAGGAAAGCAACATGGAAAACAGCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CAA 90 bp GATACTGATCAATTCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGGCTCATCATCTCTCTaGGTGAGGAGGCCAATCTCA +
Preference number: 5 (lower is better)
Translates to: DTDQFLLQIIGQNLCHGPGSSSL*VRRPIS
Trigger: TGAGATTGGCCTCCTCACCAAGAGAGATGATGAGCC...AGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAGTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp GCCAACAGCTTTTCAAAGTCATCAGGTTGCAAGGTGCGAGCCTCAAGGATCTCTTGTACAGCTTCCCCATaGCTTCCTTACAGAGCTGAC +
Preference number: 5 (lower is better)
Translates to: ANSFSKSSGCKVRASRISCTASP*LPYRAD
Trigger: GTCAGCTCTGTAAGGAAGCAATGGGGAAGCTGTACA...AGAGATCCTTGAGGCTCGCACCTTGCAACCTGATGACTTTGAAAAGCTGTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509722.5
CDS-3UTR CAA 90 bp TCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAATTTTTGGAAATCCCCTaGCCCATGCAAGATAAGTTT +
Preference number: 5 (lower is better)
Translates to: SSCKSLARTCVTALPKPQFLEIP*PMQDKF
Trigger: AAACTTATCTTGCATGGGCAAGGGGATTTCCAAAAA...TTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp CCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAATTTTTGGAAATCCCCTaGCCCATGCAAGATAAGTTT +
Preference number: 5 (lower is better)
Translates to: PLANHWPEPVSRPCPSPKFLEIP*PMQDKF
Trigger: AAACTTATCTTGCATGGGCAAGGGGATTTCCAAAAA...TTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp TTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACTATTCCTGTGTCTCTTaGACAATGTGGCTTTTCTTG +
Preference number: 5 (lower is better)
Translates to: LQIIGQNLCHGPAQAPKDYSCVS*TMWLFL
Trigger: CAAGAAAAGCCACATTGTCAAAGAGACACAGGAATA...GTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp ACTGTGGCAGAGGGAAAGAGGCTCTGCAGGATCTTGTGCTGCCAATTAAATGCACTGCCACTCAGAGACTaGTTGAAAACAGCTCCCTCA +
Preference number: 5 (lower is better)
Translates to: TVAEGKRLCRILCCQLNALPLRD*LKTAPS
Trigger: TGAGGGAGCTGTTTTCAACAAGTCTCTGAGTGGCAG...TGCATTTAATTGGCAGCACAAGATCCTGCAGAGCCTCTTTCCCTCTGCCACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp ACTGTGGCAGAGGGAAAGAGGCTCTGCAGGATCTTGTGCTGCCAATTAAATGCATCCACCAGATGTTCTTaGCCAGGCTCTTTTCTGGCT +
Preference number: 5 (lower is better)
Translates to: TVAEGKRLCRILCCQLNASTRCS*PGSFLA
Trigger: AGCCAGAAAAGAGCCTGGCAAAGAACATCTGGTGGA...TGCATTTAATTGGCAGCACAAGATCCTGCAGAGCCTCTTTCCCTCTGCCACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp GAAGTGGTGCCAGAGCCCCTTCTGCTCCTTATAGTCTTTCCCAACATACCTCCCTTGCTGTGGCTGATTTaGAGAAGGCTCCAAATTGTC +
Preference number: 5 (lower is better)
Translates to: EVVPEPLLLLIVFPNIPPLLWLI*RRLQIV
Trigger: GACAATTTGGAGCCTTCTCAAAATCAGCCACAGCAA...GGGAGGTATGTTGGGAAAGACTATAAGGAGCAGAAGGGGCTCTGGCACCACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509722.5
CDS-3UTR CAA 90 bp GCAGAGGGAAAGAGGCTCTGCAGGATCTTGTGCTGCCAATTAAATGCAGGACTTTTCCCCTGCCTGTCTTaGACATCGCAGTTGGTTTCT +
Preference number: 5 (lower is better)
Translates to: AEGKRLCRILCCQLNAGLFPCLS*TSQLVS
Trigger: AGAAACCAACTGCGATGTCAAAGACAGGCAGGGGAA...AAGTCCTGCATTTAATTGGCAGCACAAGATCCTGCAGAGCCTCTTTCCCTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp GCCAACAGCTTTTCAAAGTCATCAGGTTGCAAGGTGCGAGCCTCAAGGATCTCTTTCCCCTGCCTGTCTTaGACATCGCAGTTGGTTTCT +
Preference number: 5 (lower is better)
Translates to: ANSFSKSSGCKVRASRISFPCLS*TSQLVS
Trigger: AGAAACCAACTGCGATGTCAAAGACAGGCAGGGGAA...AGAGATCCTTGAGGCTCGCACCTTGCAACCTGATGACTTTGAAAAGCTGTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509722.5
CDS-3UTR CAA 90 bp TTGTGTCCCCACCCAAATCTCATCTCGAATTGTAGTCCCATAATTCCCATGTGTGAGAGCCGTGCCCATTaGTGCAGGGAACATCCATGC +
Preference number: 5 (lower is better)
Translates to: LCPHPNLISNCSPIIPMCESRAH*CREHPC
Trigger: GCATGGATGTTCCCTGCACAAATGGGCACGGCTCTC...ACACATGGGAATTATGGGACTACAATTCGAGATGAGATTTGGGTGGGGACACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CAA 90 bp GCAGAGGGAAAGAGGCTCTGCAGGATCTTGTGCTGCCAATTAAATGCAGGACTTTTCAAAGTCATCAGGTaGCAAGGTGCGAGCCTCAAG +
Preference number: 5 (lower is better)
Translates to: AEGKRLCRILCCQLNAGLFKVIR*QGASLK
Trigger: CTTGAGGCTCGCACCTTGCAACCTGATGACTTTGAA...AAGTCCTGCATTTAATTGGCAGCACAAGATCCTGCAGAGCCTCTTTCCCTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp ACTGTGGCAGAGGGAAAGAGGCTCTGCAGGATCTTGTGCTGCCAATTAAATGCATCCTCTTGCAAATCATaGGCCAGAACCTGTGTCACG +
Preference number: 5 (lower is better)
Translates to: TVAEGKRLCRILCCQLNASSCKS*ARTCVT
Trigger: CGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGA...TGCATTTAATTGGCAGCACAAGATCCTGCAGAGCCTCTTTCCCTCTGCCACAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp CTTCACAGTCAAGTAGTCCCCCAAATAGACAATAGTTTCCTGGGCCGTCCACAGTCCTCTTGCAAATCATaGGCCAGAACCTGTGTCACG +
Preference number: 5 (lower is better)
Translates to: LHSQVVPQIDNSFLGRPQSSCKS*ARTCVT
Trigger: CGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGA...CTGTGGACGGCCCAGGAAACTATTGTCTATTTGGGGGACTACTTGACTGTGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000505127.5
ENST00000509722.5
CDS-3UTR CAA 90 bp GATACTGATCAATTCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGATGATTACGATGAATaGGGTGTCCCTGGGTCTAGG +
Preference number: 5 (lower is better)
Translates to: DTDQFLLQIIGQNLCHGPDDYDE*GVPGSR
Trigger: CCTAGACCCAGGGACACCCAATTCATCGTAATCATC...AGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAGTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp GCAGGACTTAAAGTGATACTGATCAATTCCTCTTGCAAATCATTGGCCAGAACCCGCTGGTCCTCGCTCTaGTCCTCTTCCGACACATCT +
Preference number: 5 (lower is better)
Translates to: AGLKVILINSSCKSLARTRWSSL*SSSDTS
Trigger: AGATGTGTCGGAAGAGGACAAGAGCGAGGACCAGCG...GGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAGTATCACTTTAAGTCCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp TTCATAGAGTCTCTTGTTAAATTCTGTCACATAGTGCTGTGCGGTCATCTGTCGGGGCCCACGGCTTGTTaGTACTGCCACTTTTCAGGC +
Preference number: 5 (lower is better)
Translates to: FIESLVKFCHIVLCGHLSGPTAC*YCHFSG
Trigger: GCCTGAAAAGTGGCAGTACAAACAAGCCGTGGGCCC...CGACAGATGACCGCACAGCACTATGTGACAGAATTTAACAAGAGACTCTATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505127.5
CDS-3UTR CAA 90 bp GCAGAGGGAAAGAGGCTCTGCAGGATCTTGTGCTGCCAATTAAATGCAGGACTTAACTTGTGGAGACCTTaGGCGACCTGCAGAAGTTTT +
Preference number: 5 (lower is better)
Translates to: AEGKRLCRILCCQLNAGLNLWRP*ATCRSF
Trigger: AAAACTTCTGCAGGTCGCCAAAGGTCTCCACAAGTT...AAGTCCTGCATTTAATTGGCAGCACAAGATCCTGCAGAGCCTCTTTCCCTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp CATTGCTGTAGTCCGATGGCTCAGTCTCAGTCTCCACATCTTGATCCAAGGAGAAACTTGTGGAGACCTTaGGCGACCTGCAGAAGTTTT +
Preference number: 5 (lower is better)
Translates to: HCCSPMAQSQSPHLDPRRNLWRP*ATCRSF
Trigger: AAAACTTCTGCAGGTCGCCAAAGGTCTCCACAAGTT...TCTCCTTGGATCAAGATGTGGAGACTGAGACTGAGCCATCGGACTACAGCAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509722.5
CDS-3UTR CAA 90 bp ACTGTGGCAGAGGGAAAGAGGCTCTGCAGGATCTTGTGCTGCCAATTAAATGCACCCGTTGCTCCATTGTaGCTTATTAGACTGCTCAGA +
Preference number: 5 (lower is better)
Translates to: TVAEGKRLCRILCCQLNAPVAPL*LIRLLR
Trigger: TCTGAGCAGTCTAATAAGCAACAATGGAGCAACGGG...TGCATTTAATTGGCAGCACAAGATCCTGCAGAGCCTCTTTCCCTCTGCCACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp TGTAGTCCGATGGCTCAGTCTCAGTCTCCACATCTTGATCCAAGGAGACTCGAACCCGTTGCTCCATTGTaGCTTATTAGACTGCTCAGA +
Preference number: 5 (lower is better)
Translates to: CSPMAQSQSPHLDPRRLEPVAPL*LIRLLR
Trigger: TCTGAGCAGTCTAATAAGCAACAATGGAGCAACGGG...TTCGAGTCTCCTTGGATCAAGATGTGGAGACTGAGACTGAGCCATCGGACTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509722.5
CDS-3UTR CAA 90 bp CTTCACAGTCAAGTAGTCCCCCAAATAGACAATAGTTTCCTGGGCCGTCCACAGGTACCCGTTGCTCCATaGTTGCTTATTAGACTGCTC +
Preference number: 5 (lower is better)
Translates to: LHSQVVPQIDNSFLGRPQVPVAP*LLIRLL
Trigger: GAGCAGTCTAATAAGCAACAATGGAGCAACGGGTAC...CTGTGGACGGCCCAGGAAACTATTGTCTATTTGGGGGACTACTTGACTGTGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000505127.5
ENST00000509722.5
CDS-3UTR CAA 90 bp GCAGAGGGAAAGAGGCTCTGCAGGATCTTGTGCTGCCAATTAAATGCAGGACTTGACTGCACCAGGACCTaGTCACTTTCATTTCTGTAC +
Preference number: 5 (lower is better)
Translates to: AEGKRLCRILCCQLNAGLDCTRT*SLSFLY
Trigger: GTACAGAAATGAAAGTGACAAGGTCCTGGTGCAGTC...AAGTCCTGCATTTAATTGGCAGCACAAGATCCTGCAGAGCCTCTTTCCCTCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp GCAGAGGGAAAGAGGCTCTGCAGGATCTTGTGCTGCCAATTAAATGCAGGACTTGAGGAAGTGCTGAAATaGTACAGCTTCCCCATTGCT +
Preference number: 5 (lower is better)
Translates to: AEGKRLCRILCCQLNAGLEEVLK*YSFPIA
Trigger: AGCAATGGGGAAGCTGTACAATTTCAGCACTTCCTC...AAGTCCTGCATTTAATTGGCAGCACAAGATCCTGCAGAGCCTCTTTCCCTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp ACTGTGGCAGAGGGAAAGAGGCTCTGCAGGATCTTGTGCTGCCAATTAAATGCACTAAACCCTGATAAGTaGCTCCAAGCACTGGAAGTC +
Preference number: 5 (lower is better)
Translates to: TVAEGKRLCRILCCQLNALNPDK*LQALEV
Trigger: GACTTCCAGTGCTTGGAGCAACTTATCAGGGTTTAG...TGCATTTAATTGGCAGCACAAGATCCTGCAGAGCCTCTTTCCCTCTGCCACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp ACTGTGGCAGAGGGAAAGAGGCTCTGCAGGATCTTGTGCTGCCAATTAAATGCATGTGTGCCCATATTCTaGGGCCTACCAGAATCAGAA +
Preference number: 5 (lower is better)
Translates to: TVAEGKRLCRILCCQLNACVPIF*GLPESE
Trigger: TTCTGATTCTGGTAGGCCCAAGAATATGGGCACACA...TGCATTTAATTGGCAGCACAAGATCCTGCAGAGCCTCTTTCCCTCTGCCACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp GACTGTGCCGTATTCTATGTGCATGGTTTCTCCATTGAAGGTCTAGTCAAAGAAGAGAGCCGTGCCCATTaGTGCAGGGAACATCCATGC +
Preference number: 5 (lower is better)
Translates to: DCAVFYVHGFSIEGLVKEESRAH*CREHPC
Trigger: GCATGGATGTTCCCTGCACAAATGGGCACGGCTCTC...TTCTTTGACTAGACCTTCAATGGAGAAACCATGCACATAGAATACGGCACAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509722.5
CDS-3UTR CAA 90 bp TTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGCCCAAGCCCCAAAGGACCATCCCTTTATTGTCTaGTCCTCTAAAATCAGTAGT +
Preference number: 5 (lower is better)
Translates to: LQIIGQNLCHGPAQAPKDHPFIV*SSKISS
Trigger: ACTACTGATTTTAGAGGACAAGACAATAAAGGGATG...GTCCTTTGGGGCTTGGGCAGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp ACTGTGGCAGAGGGAAAGAGGCTCTGCAGGATCTTGTGCTGCCAATTAAATGCAGGGCTGTTTTCCATGTaGCTTTCCTTGCAGGACTTA +
Preference number: 5 (lower is better)
Translates to: TVAEGKRLCRILCCQLNAGLFSM*LSLQDL
Trigger: TAAGTCCTGCAAGGAAAGCAACATGGAAAACAGCCC...TGCATTTAATTGGCAGCACAAGATCCTGCAGAGCCTCTTTCCCTCTGCCACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000650871.1
CDS TCA 90 bp TTCTCTTTGAGACGGGTATTTACTTTTGTCTCTTCCGAGGCAGGCTaGGGGTGTTGCTGTCTGCCAGTTTCTGTAGTGCATTCACTAGTC +
Preference number: 5 (lower is better)
Translates to: FSLRRVFTFVSSEAG*GCCCLPVSVVHSLV
Trigger: GACTAGTGAATGCACTACAGAAACTGGCAGACAGCAACACCCTCAGCCTGCCTCGGAAGAGACAAAAGTAAATACCCGTCTCAAAGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502366.5
CDS GCA 90 bp GACCGGAGGAGATGGCCCTCTCTTGCAGCTGATATCATATTTCAGTaGATTCTCTTTGAGACGGGTATTTACTTTTGTCTCTTCCGAGGC +
Preference number: 5 (lower is better)
Translates to: DRRRWPSLAADIIFQ*ILFETGIYFCLFRG
Trigger: GCCTCGGAAGAGACAAAAGTAAATACCCGTCTCAAAGAGAATGCACTGAAATATGATATCAGCTGCAAGAGAGGGCCATCTCCTCCGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502366.5
CDS CCA 90 bp AGAGGCCCTTTTTATCCGGCTGAGGAAGTGCCAAATATCCTACAATaGAGGCCCATATTAACTCTGCTGCTTCGTACCACATCCCTGAAA +
Preference number: 5 (lower is better)
Translates to: RGPFYPAEEVPNILQ*RPILTLLLRTTSLK
Trigger: TTTCAGGGATGTGGTACGAAGCAGCAGAGTTAATATGGGCCTCCATTGTAGGATATTTGGCACTTCCTCAGCCGGATAAAAAGGGCCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504745.1
CDS-3UTR CAA 90 bp GCAGGACTTAAAGTGATACTGATCAATTCCTCTTGCAAATCATTGGCCAGAACCGCCACTTCATTTCCTTaGCCTCCTGGATCAGGGTCC +
Preference number: 5 (lower is better)
Translates to: AGLKVILINSSCKSLARTATSFP*PPGSGS
Trigger: GGACCCTGATCCAGGAGGCAAAGGAAATGAAGTGGC...GGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAGTATCACTTTAAGTCCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000505127.5
ENST00000650871.1
CDS-3UTR CAA 90 bp GATACTGATCAATTCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTCCCGTTGCTCCATTGTaGCTTATTAGACTGCTCAGA +
Preference number: 5 (lower is better)
Translates to: DTDQFLLQIIGQNLCHGPPVAPL*LIRLLR
Trigger: TCTGAGCAGTCTAATAAGCAACAATGGAGCAACGGG...AGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAGTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp GATACTGATCAATTCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGTACCCGTTGCTCCATaGTTGCTTATTAGACTGCTC +
Preference number: 5 (lower is better)
Translates to: DTDQFLLQIIGQNLCHGPVPVAP*LLIRLL
Trigger: GAGCAGTCTAATAAGCAACAATGGAGCAACGGGTAC...AGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAGTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp GATACTGATCAATTCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTACAGCCAGGTACCCGTaGCTCCATTGTTGCTTATTA +
Preference number: 5 (lower is better)
Translates to: DTDQFLLQIIGQNLCHGPTARYP*LHCCLL
Trigger: TAATAAGCAACAATGGAGCAACGGGTACCTGGCTGT...AGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAGTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp TTGTGTCCCCACCCAAATCTCATCTCGAATTGTAGTCCCATAATTCCCATGTGTCCACATCCCCAGCTTTaGCAGAATCTGCCCTCTGAT +
Preference number: 5 (lower is better)
Translates to: LCPHPNLISNCSPIIPMCPHPQL*QNLPSD
Trigger: ATCAGAGGGCAGATTCTGCAAAAGCTGGGGATGTGG...ACACATGGGAATTATGGGACTACAATTCGAGATGAGATTTGGGTGGGGACACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CAA 90 bp TTAAATGCAGGACTTAAAGTGATACTGATCAATTCCTCTTGCAAATCATTGGCCAAGGCAGCTGCCAGCTaGCAGGCTTCTGCAGCGGAC +
Preference number: 5 (lower is better)
Translates to: LNAGLKVILINSSCKSLAKAAAS*QASAAD
Trigger: GTCCGCTGCAGAAGCCTGCAAGCTGGCAGCTGCCTT...GGCCAATGATTTGCAAGAGGAATTGATCAGTATCACTTTAAGTCCTGCATTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp GATACTGATCAATTCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGAGGAAGTGCTGAAATaGTACAGCTTCCCCATTGCT +
Preference number: 5 (lower is better)
Translates to: DTDQFLLQIIGQNLCHGPEEVLK*YSFPIA
Trigger: AGCAATGGGGAAGCTGTACAATTTCAGCACTTCCTC...AGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAGTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp GCAGAGGGAAAGAGGCTCTGCAGGATCTTGTGCTGCCAATTAAATGCAGGACTTCACAGACATAACTTCTaGAGACAGAGCTTCTCTGTC +
Preference number: 5 (lower is better)
Translates to: AEGKRLCRILCCQLNAGLHRHNF*RQSFSV
Trigger: GACAGAGAAGCTCTGTCTCAAGAAGTTATGTCTGTG...AAGTCCTGCATTTAATTGGCAGCACAAGATCCTGCAGAGCCTCTTTCCCTCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp CTCTGCTGCTTCGTACCACATCCCCAGCTTTTGCAGAATCTGCCCTCTGATCTGTTTTTGGAAATCCCCTaGCCCATGCAAGATAAGTTT +
Preference number: 5 (lower is better)
Translates to: LCCFVPHPQLLQNLPSDLFLEIP*PMQDKF
Trigger: AAACTTATCTTGCATGGGCAAGGGGATTTCCAAAAA...CAGATCAGAGGGCAGATTCTGCAAAAGCTGGGGATGTGGTACGAAGCAGCAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000509722.5
CDS-3UTR CAA 90 bp GATACTGATCAATTCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTGGTGTCAAGGATTTTTaGGAAATCCCCTTGCCCATG +
Preference number: 5 (lower is better)
Translates to: DTDQFLLQIIGQNLCHGPGVKDF*EIPLPM
Trigger: CATGGGCAAGGGGATTTCCAAAAAATCCTTGACACC...AGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAGTATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp TGGGGCTGTTTTCCATGTTGCTTTCCTTGCAGGACTTATGCCCAGAAGCAGCGGACAATGTGGCTTTTCTaGAGTAGTACTCACAGTATC +
Preference number: 5 (lower is better)
Translates to: WGCFPCCFPCRTYAQKQRTMWLF*SSTHSI
Trigger: GATACTGTGAGTACTACTCAAGAAAAGCCACATTGT...CCGCTGCTTCTGGGCATAAGTCCTGCAAGGAAAGCAACATGGAAAACAGCCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CAA 90 bp TGGGGCTGTTTTCCATGTTGCTTTCCTTGCAGGACTTATGCCCAGAAGCAGCGGTATTCCTGTGTCTCTTaGACAATGTGGCTTTTCTTG +
Preference number: 5 (lower is better)
Translates to: WGCFPCCFPCRTYAQKQRYSCVS*TMWLFL
Trigger: CAAGAAAAGCCACATTGTCAAAGAGACACAGGAATA...CCGCTGCTTCTGGGCATAAGTCCTGCAAGGAAAGCAACATGGAAAACAGCCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CAA 90 bp GATACTGATCAATTCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTCTCAGTCTCCACATCTaGATCCAAGGAGACTCGAAA +
Preference number: 5 (lower is better)
Translates to: DTDQFLLQIIGQNLCHGPLSLHI*IQGDSK
Trigger: TTTCGAGTCTCCTTGGATCAAGATGTGGAGACTGAG...AGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAGTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp AAGTTTCCTGAGGTCTCCCCAGCCATGTGGAACTGTGAGTTAATTAAACCTCTTATGTGCTCGGTGGAGTaGACTGGGCTTAAAAACCCC +
Preference number: 5 (lower is better)
Translates to: KFPEVSPAMWNCELIKPLMCSVE*TGLKNP
Trigger: GGGGTTTTTAAGCCCAGTCAACTCCACCGAGCACAT...AAGAGGTTTAATTAACTCACAGTTCCACATGGCTGGGGAGACCTCAGGAAACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CAA 90 bp AAGCAGCGGTCTCCTGACCCATTCTTGATAACTGTGGCAGAGGGAAAGAGGCTCCCAGTAGTATCAGTCTaGACAGATAGTGACAAAAAG +
Preference number: 5 (lower is better)
Translates to: KQRSPDPFLITVAEGKRLPVVSV*TDSDKK
Trigger: CTTTTTGTCACTATCTGTCAAGACTGATACTACTGG...GAGCCTCTTTCCCTCTGCCACAGTTATCAAGAATGGGTCAGGAGACCGCTGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000650871.1
CDS-3UTR CAA 90 bp CCCACTGTCCACCCTCTGATAAGCCCTGGTGTGTGTTGTTCCCTCTATGTGTCCAGACAGGAAAACAAATaGAATTCGTATCACAAAGGC +
Preference number: 5 (lower is better)
Translates to: PTVHPLISPGVCCSLYVSRQENK*NSYHKG
Trigger: GCCTTTGTGATACGAATTCAATTTGTTTTCCTGTCT...GGACACATAGAGGGAACAACACACACCAGGGCTTATCAGAGGGTGGACAGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CAA 90 bp TCATTTCTGTACAGCCAGGTACCCGTTGCTCCATTGTTGCTTATTAGACTGCTCAACTTGTGGAGACCTTaGGCGACCTGCAGAAGTTTT +
Preference number: 5 (lower is better)
Translates to: SFLYSQVPVAPLLLIRLLNLWRP*ATCRSF
Trigger: AAAACTTCTGCAGGTCGCCAAAGGTCTCCACAAGTT...GAGCAGTCTAATAAGCAACAATGGAGCAACGGGTACCTGGCTGTACAGAAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515330.5
CDS-3UTR CAA 90 bp CTAAAATCAGTAGTATTGTGGATGGGATGTAGAATATCTGGGTGGGAATGTTTTGTGGCTGGCTGCAACTaGTGGAGACCTTTGGCGACC +
Preference number: 5 (lower is better)
Translates to: LKSVVLWMGCRISGWECFVAGCN*WRPLAT
Trigger: GGTCGCCAAAGGTCTCCACAAGTTGCAGCCAGCCAC...AAAACATTCCCACCCAGATATTCTACATCCCATCCACAATACTACTGATTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505127.5
ENST00000509722.5
CDS-3UTR CAA 90 bp TTAAATGCAGGACTTAAAGTGATACTGATCAATTCCTCTTGCAAATCATTGGCCCACGGAGATTCGGGCTaGGCGAATAACCACCTGCGG +
Preference number: 5 (lower is better)
Translates to: LNAGLKVILINSSCKSLAHGDSG*ANNHLR
Trigger: CCGCAGGTGGTTATTCGCCAAGCCCGAATCTCCGTG...GGCCAATGATTTGCAAGAGGAATTGATCAGTATCACTTTAAGTCCTGCATTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp GCCCCTTCTGCTCCTTATAGTCTTTCCCAACATACCTCCCCAGAATTTCTTCTTGTACCCGTTGCTCCATaGTTGCTTATTAGACTGCTC +
Preference number: 5 (lower is better)
Translates to: APSAPYSLSQHTSPEFLLVPVAP*LLIRLL
Trigger: GAGCAGTCTAATAAGCAACAATGGAGCAACGGGTAC...AAGAAGAAATTCTGGGGAGGTATGTTGGGAAAGACTATAAGGAGCAGAAGGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505127.5
ENST00000509722.5
CDS-3UTR CAA 90 bp CATTTCTGTACAGCCAGGTACCCGTTGCTCCATTGTTGCTTATTAGACTGCTCAGTACCCGTTGCTCCATaGTTGCTTATTAGACTGCTC +
Preference number: 5 (lower is better)
Translates to: HFCTARYPLLHCCLLDCSVPVAP*LLIRLL
Trigger: GAGCAGTCTAATAAGCAACAATGGAGCAACGGGTAC...TGAGCAGTCTAATAAGCAACAATGGAGCAACGGGTACCTGGCTGTACAGAAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515330.5
CDS-3UTR CAA 90 bp GAAAGCAGCTTTGACAAAGCTGTGAAGCTCCTGTTTTCCAGTAACAGGCTCATCACAGCCAGGTACCCGTaGCTCCATTGTTGCTTATTA +
Preference number: 5 (lower is better)
Translates to: ESSFDKAVKLLFSSNRLITARYP*LHCCLL
Trigger: TAATAAGCAACAATGGAGCAACGGGTACCTGGCTGT...GATGAGCCTGTTACTGGAAAACAGGAGCTTCACAGCTTTGTCAAAGCTGCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509722.5
CDS-3UTR CAA 90 bp TCATTTCTGTACAGCCAGGTACCCGTTGCTCCATTGTTGCTTATTAGACTGCTCACAGCCAGGTACCCGTaGCTCCATTGTTGCTTATTA +
Preference number: 5 (lower is better)
Translates to: SFLYSQVPVAPLLLIRLLTARYP*LHCCLL
Trigger: TAATAAGCAACAATGGAGCAACGGGTACCTGGCTGT...GAGCAGTCTAATAAGCAACAATGGAGCAACGGGTACCTGGCTGTACAGAAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515330.5
CDS-3UTR CAA 90 bp AAGTTTCCTGAGGTCTCCCCAGCCATGTGGAACTGTGAGTTAATTAAACCTCTTTGTACAGCTTCCCCATaGCTTCCTTACAGAGCTGAC +
Preference number: 5 (lower is better)
Translates to: KFPEVSPAMWNCELIKPLCTASP*LPYRAD
Trigger: GTCAGCTCTGTAAGGAAGCAATGGGGAAGCTGTACA...AAGAGGTTTAATTAACTCACAGTTCCACATGGCTGGGGAGACCTCAGGAAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CAA 90 bp CCTGAGGTCTCCCCAGCCATGTGGAACTGTGAGTTAATTAAACCTCTTTTCTTTTGTACAGCTTCCCCATaGCTTCCTTACAGAGCTGAC +
Preference number: 5 (lower is better)
Translates to: PEVSPAMWNCELIKPLFFCTASP*LPYRAD
Trigger: GTCAGCTCTGTAAGGAAGCAATGGGGAAGCTGTACA...AAAGAAAAGAGGTTTAATTAACTCACAGTTCCACATGGCTGGGGAGACCTCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CAA 90 bp GAAAGCAGCTTTGACAAAGCTGTGAAGCTCCTGTTTTCCAGTAACAGGCTCATCTGTGTGCCCATATTCTaGGGCCTACCAGAATCAGAA +
Preference number: 5 (lower is better)
Translates to: ESSFDKAVKLLFSSNRLICVPIF*GLPESE
Trigger: TTCTGATTCTGGTAGGCCCAAGAATATGGGCACACA...GATGAGCCTGTTACTGGAAAACAGGAGCTTCACAGCTTTGTCAAAGCTGCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509722.5
CDS-3UTR CAA 90 bp ACTGTGGCAGAGGGAAAGAGGCTCTGCAGGATCTTGTGCTGCCAATTAAATGCATCTTTGACATCGCAGTaGGTTTCTGGAAACTCAACA +
Preference number: 5 (lower is better)
Translates to: TVAEGKRLCRILCCQLNASLTSQ*VSGNST
Trigger: TGTTGAGTTTCCAGAAACCAACTGCGATGTCAAAGA...TGCATTTAATTGGCAGCACAAGATCCTGCAGAGCCTCTTTCCCTCTGCCACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp GCAGAGGGAAAGAGGCTCTGCAGGATCTTGTGCTGCCAATTAAATGCAGGACTTTCTTTGACATCGCAGTaGGTTTCTGGAAACTCAACA +
Preference number: 5 (lower is better)
Translates to: AEGKRLCRILCCQLNAGLSLTSQ*VSGNST
Trigger: TGTTGAGTTTCCAGAAACCAACTGCGATGTCAAAGA...AAGTCCTGCATTTAATTGGCAGCACAAGATCCTGCAGAGCCTCTTTCCCTCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp AAGTTTCCTGAGGTCTCCCCAGCCATGTGGAACTGTGAGTTAATTAAACCTCTTTTCAAAGTCATCAGGTaGCAAGGTGCGAGCCTCAAG +
Preference number: 5 (lower is better)
Translates to: KFPEVSPAMWNCELIKPLFKVIR*QGASLK
Trigger: CTTGAGGCTCGCACCTTGCAACCTGATGACTTTGAA...AAGAGGTTTAATTAACTCACAGTTCCACATGGCTGGGGAGACCTCAGGAAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CAA 90 bp GCAGGACTTAAAGTGATACTGATCAATTCCTCTTGCAAATCATTGGCCAGAACCATGTGCTCGGTGGAGTaGACTGGGCTTAAAAACCCC +
Preference number: 5 (lower is better)
Translates to: AGLKVILINSSCKSLARTMCSVE*TGLKNP
Trigger: GGGGTTTTTAAGCCCAGTCAACTCCACCGAGCACAT...GGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAGTATCACTTTAAGTCCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp TGGCATTTCCCCTGCTGGCACTCATTCTCTCTCCTGCTACCCTATGAAGAGGTGCATCCCTTTATTGTCTaGTCCTCTAAAATCAGTAGT +
Preference number: 5 (lower is better)
Translates to: WHFPCWHSFSLLLPYEEVHPFIV*SSKISS
Trigger: ACTACTGATTTTAGAGGACAAGACAATAAAGGGATG...CACCTCTTCATAGGGTAGCAGGAGAGAGAATGAGTGCCAGCAGGGGAAATGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS GCA 90 bp GAGAAATGCAAGTTTTACATGATTGTACCCAGCTTTTGCAGAATCTaGCCTCTGATCTGTATACAGACCGACTGCACCAGGACCTTGTCA +
Preference number: 5 (lower is better)
Translates to: EKCKFYMIVPSFCRI*PLICIQTDCTRTLS
Trigger: TGACAAGGTCCTGGTGCAGTCGGTCTGTATACAGATCAGAGGGCAGATTCTGCAAAAGCTGGGTACAATCATGTAAAACTTGCATTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504745.1
ENST00000509209.1
CDS GCA 90 bp ATGAGCCTTGAGAAATGCAAGTTTTACATGATTGTACCCAGCTTTTaGAGAATCTGCCCTCTGATCTGTATACAGACCGACTGCACCAGG +
Preference number: 5 (lower is better)
Translates to: MSLEKCKFYMIVPSF*RICPLICIQTDCTR
Trigger: CCTGGTGCAGTCGGTCTGTATACAGATCAGAGGGCAGATTCTGCAAAAGCTGGGTACAATCATGTAAAACTTGCATTTCTCAAGGCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504745.1
ENST00000509209.1
CDS-3UTR CAA 90 bp TTAAATGCAGGACTTAAAGTGATACTGATCAATTCCTCTTGCAAATCATTGGCCGGGCCCACGGCTTGTTaGTACTGCCACTTTTCAGGC +
Preference number: 5 (lower is better)
Translates to: LNAGLKVILINSSCKSLAGPTAC*YCHFSG
Trigger: GCCTGAAAAGTGGCAGTACAAACAAGCCGTGGGCCC...GGCCAATGATTTGCAAGAGGAATTGATCAGTATCACTTTAAGTCCTGCATTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000505127.5
ENST00000650871.1
CDS-3UTR CAA 90 bp CAACCAAATGCCACACAATTAGCTTTGAACATGCACTTAACAATTACAAGTTGTGTGGCTGGCTGCAACTaGTGGAGACCTTTGGCGACC +
Preference number: 5 (lower is better)
Translates to: QPNATQLALNMHLTITSCVAGCN*WRPLAT
Trigger: GGTCGCCAAAGGTCTCCACAAGTTGCAGCCAGCCAC...ACAACTTGTAATTGTTAAGTGCATGTTCAAAGCTAATTGTGTGGCATTTGGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515330.5
CDS-3UTR CAA 90 bp AAAATAATGGCCTCCAGCTCTATCCATGTCCCTGCAAAGGACATGATCTCATTCCCCGTTGCTCCATTGTaGCTTATTAGACTGCTCAGA +
Preference number: 5 (lower is better)
Translates to: KIMASSSIHVPAKDMISFPVAPL*LIRLLR
Trigger: TCTGAGCAGTCTAATAAGCAACAATGGAGCAACGGG...GAATGAGATCATGTCCTTTGCAGGGACATGGATAGAGCTGGAGGCCATTATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CAA 90 bp GCAGAGGGAAAGAGGCTCTGCAGGATCTTGTGCTGCCAATTAAATGCAGGACTTTTTTTGGAAATCCCCTaGCCCATGCAAGATAAGTTT +
Preference number: 5 (lower is better)
Translates to: AEGKRLCRILCCQLNAGLFLEIP*PMQDKF
Trigger: AAACTTATCTTGCATGGGCAAGGGGATTTCCAAAAA...AAGTCCTGCATTTAATTGGCAGCACAAGATCCTGCAGAGCCTCTTTCCCTCTGC
46% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp CCTGAGGTCTCCCCAGCCATGTGGAACTGTGAGTTAATTAAACCTCTTTTCTTTGGTGTCAAGGATTTTTaGGAAATCCCCTTGCCCATG +
Preference number: 5 (lower is better)
Translates to: PEVSPAMWNCELIKPLFFGVKDF*EIPLPM
Trigger: CATGGGCAAGGGGATTTCCAAAAAATCCTTGACACC...AAAGAAAAGAGGTTTAATTAACTCACAGTTCCACATGGCTGGGGAGACCTCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CAA 90 bp AAGTTTCCTGAGGTCTCCCCAGCCATGTGGAACTGTGAGTTAATTAAACCTCTTCTCAGTCTCCACATCTaGATCCAAGGAGACTCGAAA +
Preference number: 5 (lower is better)
Translates to: KFPEVSPAMWNCELIKPLLSLHI*IQGDSK
Trigger: TTTCGAGTCTCCTTGGATCAAGATGTGGAGACTGAG...AAGAGGTTTAATTAACTCACAGTTCCACATGGCTGGGGAGACCTCAGGAAACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CAA 90 bp GCAGGACTTAAAGTGATACTGATCAATTCCTCTTGCAAATCATTGGCCAGAACCCTGCCACTCAGAGACTaGTTGAAAACAGCTCCCTCA +
Preference number: 5 (lower is better)
Translates to: AGLKVILINSSCKSLARTLPLRD*LKTAPS
Trigger: TGAGGGAGCTGTTTTCAACAAGTCTCTGAGTGGCAG...GGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAGTATCACTTTAAGTCCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp TTGTGTCCCCACCCAAATCTCATCTCGAATTGTAGTCCCATAATTCCCATGTGTCTAAACCCTGATAAGTaGCTCCAAGCACTGGAAGTC +
Preference number: 5 (lower is better)
Translates to: LCPHPNLISNCSPIIPMCLNPDK*LQALEV
Trigger: GACTTCCAGTGCTTGGAGCAACTTATCAGGGTTTAG...ACACATGGGAATTATGGGACTACAATTCGAGATGAGATTTGGGTGGGGACACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CAA 90 bp GATTGTAAGTTTCCTGAGGTCTCCCCAGCCATGTGGAACTGTGAGTTAATTAAATCCACCAGATGTTCTTaGCCAGGCTCTTTTCTGGCT +
Preference number: 5 (lower is better)
Translates to: DCKFPEVSPAMWNCELIKSTRCS*PGSFLA
Trigger: AGCCAGAAAAGAGCCTGGCAAAGAACATCTGGTGGA...TTTAATTAACTCACAGTTCCACATGGCTGGGGAGACCTCAGGAAACTTACAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CAA 90 bp GCAGGACTTAAAGTGATACTGATCAATTCCTCTTGCAAATCATTGGCCAGAACCTCCACCAGATGTTCTTaGCCAGGCTCTTTTCTGGCT +
Preference number: 5 (lower is better)
Translates to: AGLKVILINSSCKSLARTSTRCS*PGSFLA
Trigger: AGCCAGAAAAGAGCCTGGCAAAGAACATCTGGTGGA...GGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAGTATCACTTTAAGTCCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp TTGTGTCCCCACCCAAATCTCATCTCGAATTGTAGTCCCATAATTCCCATGTGTTGTGTGCCCATATTCTaGGGCCTACCAGAATCAGAA +
Preference number: 5 (lower is better)
Translates to: LCPHPNLISNCSPIIPMCCVPIF*GLPESE
Trigger: TTCTGATTCTGGTAGGCCCAAGAATATGGGCACACA...ACACATGGGAATTATGGGACTACAATTCGAGATGAGATTTGGGTGGGGACACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CAA 90 bp GCAGGACTTAAAGTGATACTGATCAATTCCTCTTGCAAATCATTGGCCAGAACCTTCCCCTGCCTGTCTTaGACATCGCAGTTGGTTTCT +
Preference number: 5 (lower is better)
Translates to: AGLKVILINSSCKSLARTFPCLS*TSQLVS
Trigger: AGAAACCAACTGCGATGTCAAAGACAGGCAGGGGAA...GGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAGTATCACTTTAAGTCCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp TTAAATGCAGGACTTAAAGTGATACTGATCAATTCCTCTTGCAAATCATTGGCCCATGCTGTCGAGCAGTaGCCCCTCCTCATCCACTGT +
Preference number: 5 (lower is better)
Translates to: LNAGLKVILINSSCKSLAHAVEQ*PLLIHC
Trigger: ACAGTGGATGAGGAGGGGCAACTGCTCGACAGCATG...GGCCAATGATTTGCAAGAGGAATTGATCAGTATCACTTTAAGTCCTGCATTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp GATTGTAAGTTTCCTGAGGTCTCCCCAGCCATGTGGAACTGTGAGTTAATTAAATTCAAAGTCATCAGGTaGCAAGGTGCGAGCCTCAAG +
Preference number: 5 (lower is better)
Translates to: DCKFPEVSPAMWNCELIKFKVIR*QGASLK
Trigger: CTTGAGGCTCGCACCTTGCAACCTGATGACTTTGAA...TTTAATTAACTCACAGTTCCACATGGCTGGGGAGACCTCAGGAAACTTACAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CAA 90 bp TTCATAGAGTCTCTTGTTAAATTCTGTCACATAGTGCTGTGCGGTCATCTGTCGTCCTCTTGCAAATCATaGGCCAGAACCTGTGTCACG +
Preference number: 5 (lower is better)
Translates to: FIESLVKFCHIVLCGHLSSSCKS*ARTCVT
Trigger: CGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGA...CGACAGATGACCGCACAGCACTATGTGACAGAATTTAACAAGAGACTCTATGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505127.5
ENST00000509722.5
CDS-3UTR CAA 90 bp AAAATAATGGCCTCCAGCTCTATCCATGTCCCTGCAAAGGACATGATCTCATTCGGGCTGTTTTCCATGTaGCTTTCCTTGCAGGACTTA +
Preference number: 5 (lower is better)
Translates to: KIMASSSIHVPAKDMISFGLFSM*LSLQDL
Trigger: TAAGTCCTGCAAGGAAAGCAACATGGAAAACAGCCC...GAATGAGATCATGTCCTTTGCAGGGACATGGATAGAGCTGGAGGCCATTATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CAA 90 bp AAGTTTCCTGAGGTCTCCCCAGCCATGTGGAACTGTGAGTTAATTAAACCTCTTGGGCTGTTTTCCATGTaGCTTTCCTTGCAGGACTTA +
Preference number: 5 (lower is better)
Translates to: KFPEVSPAMWNCELIKPLGLFSM*LSLQDL
Trigger: TAAGTCCTGCAAGGAAAGCAACATGGAAAACAGCCC...AAGAGGTTTAATTAACTCACAGTTCCACATGGCTGGGGAGACCTCAGGAAACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CAA 90 bp GATGTAGAATATCTGGGTGGGAATGTTTTGTTCATAGAGTCTCTTGTTAAATTCCGCTGGTCCTCGCTCTaGTCCTCTTCCGACACATCT +
Preference number: 5 (lower is better)
Translates to: DVEYLGGNVLFIESLVKFRWSSL*SSSDTS
Trigger: AGATGTGTCGGAAGAGGACAAGAGCGAGGACCAGCG...GAATTTAACAAGAGACTCTATGAACAAAACATTCCCACCCAGATATTCTACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505127.5
ENST00000509722.5
CDS-3UTR CAA 90 bp CAACCAAATGCCACACAATTAGCTTTGAACATGCACTTAACAATTACAAGTTGTCGCTGGTCCTCGCTCTaGTCCTCTTCCGACACATCT +
Preference number: 5 (lower is better)
Translates to: QPNATQLALNMHLTITSCRWSSL*SSSDTS
Trigger: AGATGTGTCGGAAGAGGACAAGAGCGAGGACCAGCG...ACAACTTGTAATTGTTAAGTGCATGTTCAAAGCTAATTGTGTGGCATTTGGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515330.5
CDS-3UTR CAA 90 bp GCAGGACTTAAAGTGATACTGATCAATTCCTCTTGCAAATCATTGGCCAGAACCACAGCCAGGTACCCGTaGCTCCATTGTTGCTTATTA +
Preference number: 5 (lower is better)
Translates to: AGLKVILINSSCKSLARTTARYP*LHCCLL
Trigger: TAATAAGCAACAATGGAGCAACGGGTACCTGGCTGT...GGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAGTATCACTTTAAGTCCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp AAGTTTCCTGAGGTCTCCCCAGCCATGTGGAACTGTGAGTTAATTAAACCTCTTATCTCAAAGGCCTCTTaGGCTTCACACAGATGTAAG +
Preference number: 5 (lower is better)
Translates to: KFPEVSPAMWNCELIKPLISKAS*ASHRCK
Trigger: CTTACATCTGTGTGAAGCCAAAGAGGCCTTTGAGAT...AAGAGGTTTAATTAACTCACAGTTCCACATGGCTGGGGAGACCTCAGGAAACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CAA 90 bp GCAGGACTTAAAGTGATACTGATCAATTCCTCTTGCAAATCATTGGCCAGAACCGAGGAAGTGCTGAAATaGTACAGCTTCCCCATTGCT +
Preference number: 5 (lower is better)
Translates to: AGLKVILINSSCKSLARTEEVLK*YSFPIA
Trigger: AGCAATGGGGAAGCTGTACAATTTCAGCACTTCCTC...GGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAGTATCACTTTAAGTCCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp TTGTGTCCCCACCCAAATCTCATCTCGAATTGTAGTCCCATAATTCCCATGTGTCACAGACATAACTTCTaGAGACAGAGCTTCTCTGTC +
Preference number: 5 (lower is better)
Translates to: LCPHPNLISNCSPIIPMCHRHNF*RQSFSV
Trigger: GACAGAGAAGCTCTGTCTCAAGAAGTTATGTCTGTG...ACACATGGGAATTATGGGACTACAATTCGAGATGAGATTTGGGTGGGGACACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CAA 90 bp GCAGGACTTAAAGTGATACTGATCAATTCCTCTTGCAAATCATTGGCCAGAACCCTCAGTCTCCACATCTaGATCCAAGGAGACTCGAAA +
Preference number: 5 (lower is better)
Translates to: AGLKVILINSSCKSLARTLSLHI*IQGDSK
Trigger: TTTCGAGTCTCCTTGGATCAAGATGTGGAGACTGAG...GGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAGTATCACTTTAAGTCCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp GATTGTAAGTTTCCTGAGGTCTCCCCAGCCATGTGGAACTGTGAGTTAATTAAATCTGGAGTCAGGATTTaGAACAGGCCAATTAGGGGT +
Preference number: 5 (lower is better)
Translates to: DCKFPEVSPAMWNCELIKSGVRI*NRPIRG
Trigger: ACCCCTAATTGGCCTGTTCAAAATCCTGACTCCAGA...TTTAATTAACTCACAGTTCCACATGGCTGGGGAGACCTCAGGAAACTTACAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CAA 90 bp ACTGTGGCAGAGGGAAAGAGGCTCTGCAGGATCTTGTGCTGCCAATTAAATGCACATCCCTTTATTGTCTaGTCCTCTAAAATCAGTAGT +
Preference number: 5 (lower is better)
Translates to: TVAEGKRLCRILCCQLNAHPFIV*SSKISS
Trigger: ACTACTGATTTTAGAGGACAAGACAATAAAGGGATG...TGCATTTAATTGGCAGCACAAGATCCTGCAGAGCCTCTTTCCCTCTGCCACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp GCAGAGGGAAAGAGGCTCTGCAGGATCTTGTGCTGCCAATTAAATGCAGGACTTAGACAGGAAAACAAATaGAATTCGTATCACAAAGGC +
Preference number: 5 (lower is better)
Translates to: AEGKRLCRILCCQLNAGLRQENK*NSYHKG
Trigger: GCCTTTGTGATACGAATTCAATTTGTTTTCCTGTCT...AAGTCCTGCATTTAATTGGCAGCACAAGATCCTGCAGAGCCTCTTTCCCTCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000650871.1
CDS-3UTR CAA 90 bp TGGCTTTATAAGCATCTGGCATTTCCCCTGCTGGCACTCATTCTCTCTCCTGCTAGACAGGAAAACAAATaGAATTCGTATCACAAAGGC +
Preference number: 5 (lower is better)
Translates to: WLYKHLAFPLLALILSPARQENK*NSYHKG
Trigger: GCCTTTGTGATACGAATTCAATTTGTTTTCCTGTCT...AGCAGGAGAGAGAATGAGTGCCAGCAGGGGAAATGCCAGATGCTTATAAAGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS TCA 90 bp GATTCTGCACGTGCTCAGTCCTCCATGTTGATGGAATTGGAAATCTaGGCCTTTATCTGTAACTGTGGTTTGAAAGGTTTTGTCTCCCAA +
Preference number: 5 (lower is better)
Translates to: DSARAQSSMLMELEI*AFICNCGLKGFVSQ
Trigger: TTGGGAGACAAAACCTTTCAAACCACAGTTACAGATAAAGGCTCAGATTTCCAATTCCATCAACATGGAGGACTGAGCACGTGCAGAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505912.1
CDS CCA 90 bp TTTTTCAAGCTCTTCACTTGGTGCTTCCTGATGGAGAATTGGAGTTaGATGAAGGAGAAGGCTGTAAGTCACAATTTCACCACTTACTGG +
Preference number: 5 (lower is better)
Translates to: FFKLFTWCFLMENWS*MKEKAVSHNFTTYW
Trigger: CCAGTAAGTGGTGAAATTGTGACTTACAGCCTTCTCCTTCATCCAACTCCAATTCTCCATCAGGAAGCACCAAGTGAAGAGCTTGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509688.5
CDS-3UTR CAA 90 bp TTAAATGCAGGACTTAAAGTGATACTGATCAATTCCTCTTGCAAATCATTGGCCCCACATCCCCAGCTTTaGCAGAATCTGCCCTCTGAT +
Preference number: 5 (lower is better)
Translates to: LNAGLKVILINSSCKSLAPHPQL*QNLPSD
Trigger: ATCAGAGGGCAGATTCTGCAAAAGCTGGGGATGTGG...GGCCAATGATTTGCAAGAGGAATTGATCAGTATCACTTTAAGTCCTGCATTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp GCAGGACTTAAAGTGATACTGATCAATTCCTCTTGCAAATCATTGGCCAGAACCTTGCTGTGGCTGATTTaGAGAAGGCTCCAAATTGTC +
Preference number: 5 (lower is better)
Translates to: AGLKVILINSSCKSLARTLLWLI*RRLQIV
Trigger: GACAATTTGGAGCCTTCTCAAAATCAGCCACAGCAA...GGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAGTATCACTTTAAGTCCTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp TATTGTGGATGGGATGTAGAATATCTGGGTGGGAATGTTTTGTTCATAGAGTCTTTCAAAGTCATCAGGTaGCAAGGTGCGAGCCTCAAG +
Preference number: 5 (lower is better)
Translates to: YCGWDVEYLGGNVLFIESFKVIR*QGASLK
Trigger: CTTGAGGCTCGCACCTTGCAACCTGATGACTTTGAA...AGACTCTATGAACAAAACATTCCCACCCAGATATTCTACATCCCATCCACAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509722.5
CDS-3UTR CAA 90 bp AGTCAAGTAGTCCCCCAAATAGACAATAGTTTCCTGGGCCGTCCACAGTTCAGACATCCCTTTATTGTCTaGTCCTCTAAAATCAGTAGT +
Preference number: 5 (lower is better)
Translates to: SQVVPQIDNSFLGRPQFRHPFIV*SSKISS
Trigger: ACTACTGATTTTAGAGGACAAGACAATAAAGGGATG...TCTGAACTGTGGACGGCCCAGGAAACTATTGTCTATTTGGGGGACTACTTGACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000505127.5
ENST00000509722.5
CDS-3UTR CAA 90 bp GATACTGATCAATTCCTCTTGCAAATCATTGGCCAGAACCTGTGTCACGGCCCTCATCCCTTTATTGTCTaGTCCTCTAAAATCAGTAGT +
Preference number: 5 (lower is better)
Translates to: DTDQFLLQIIGQNLCHGPHPFIV*SSKISS
Trigger: ACTACTGATTTTAGAGGACAAGACAATAAAGGGATG...AGGGCCGTGACACAGGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAGTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp AAACTCATAAGAAAAATGGCCATAGGCCAAGCCATATTCTGTGGCTTTGTATTCTCTCCTGACCCATTCTaGATAACTGTGGCAGAGGGA +
Preference number: 5 (lower is better)
Translates to: KLIRKMAIGQAIFCGFVFSPDPF*ITVAEG
Trigger: TCCCTCTGCCACAGTTATCAAGAATGGGTCAGGAGA...GAATACAAAGCCACAGAATATGGCTTGGCCTATGGCCATTTTTCTTATGAGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505127.5
CDS-3UTR CAA 90 bp AGTCAAGTAGTCCCCCAAATAGACAATAGTTTCCTGGGCCGTCCACAGTTCAGAAGACAGGAAAACAAATaGAATTCGTATCACAAAGGC +
Preference number: 5 (lower is better)
Translates to: SQVVPQIDNSFLGRPQFRRQENK*NSYHKG
Trigger: GCCTTTGTGATACGAATTCAATTTGTTTTCCTGTCT...TCTGAACTGTGGACGGCCCAGGAAACTATTGTCTATTTGGGGGACTACTTGACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505127.5
CDS-3UTR CAA 90 bp TTAAATGCAGGACTTAAAGTGATACTGATCAATTCCTCTTGCAAATCATTGGCCCTTTGCTGCAATCTCTaGGCCCACTTGCTTGGACTG +
Preference number: 5 (lower is better)
Translates to: LNAGLKVILINSSCKSLALCCNL*AHLLGL
Trigger: CAGTCCAAGCAAGTGGGCCAAGAGATTGCAGCAAAG...GGCCAATGATTTGCAAGAGGAATTGATCAGTATCACTTTAAGTCCTGCATTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458497.6
CDS GCA 90 bp TGTGCTTCAAAGAAATTTAATCTATTAGACCACTTAGAGTCTAAATaGCTCACTTGGGGATATCAGAGGAACAGGTGGTGTGGCTCTTCC +
Preference number: 5 (lower is better)
Translates to: CASKKFNLLDHLESK*LTWGYQRNRWCGSS
Trigger: GGAAGAGCCACACCACCTGTTCCTCTGATATCCCCAAGTGAGGCATTTAGACTCTAAGTGGTCTAATAGATTAAATTTCTTTGAAGCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509688.5
CDS CCA 90 bp AGTTGGATGAAGGAGAAGGCTGTAAGTCACAATTTCACCACTTACTaGTCTGTTCTTCCCCTGAGCAAATTAATCTCTTCGCACCTTAAT +
Preference number: 5 (lower is better)
Translates to: SWMKEKAVSHNFTTY*SVLPLSKLISSHLN
Trigger: ATTAAGGTGCGAAGAGATTAATTTGCTCAGGGGAAGAACAGACCAGTAAGTGGTGAAATTGTGACTTACAGCCTTCTCCTTCATCCAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509688.5
CDS-3UTR CAA 90 bp TTAAATGCAGGACTTAAAGTGATACTGATCAATTCCTCTTGCAAATCATTGGCCTCACATCCTTCAGGTTaGTTTTGTCCTCTGGGCCCA +
Preference number: 5 (lower is better)
Translates to: LNAGLKVILINSSCKSLASHPSG*FCPLGP
Trigger: TGGGCCCAGAGGACAAAACAAACCTGAAGGATGTGA...GGCCAATGATTTGCAAGAGGAATTGATCAGTATCACTTTAAGTCCTGCATTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000505127.5
ENST00000650871.1
CDS-3UTR CAA 90 bp AAAGCAGCAACCAAATGCCACACAATTAGCTTTGAACATGCACTTAACAATTACTCACATCCTTCAGGTTaGTTTTGTCCTCTGGGCCCA +
Preference number: 5 (lower is better)
Translates to: KAATKCHTISFEHALNNYSHPSG*FCPLGP
Trigger: TGGGCCCAGAGGACAAAACAAACCTGAAGGATGTGA...GTAATTGTTAAGTGCATGTTCAAAGCTAATTGTGTGGCATTTGGTTGCTGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515330.5
CDS-3UTR CAA 90 bp CATAAGAAAAATGGCCATAGGCCAAGCCATATTCTGTGGCTTTGTATTCTGTTTAACTTGTGGAGACCTTaGGCGACCTGCAGAAGTTTT +
Preference number: 5 (lower is better)
Translates to: HKKNGHRPSHILWLCILFNLWRP*ATCRSF
Trigger: AAAACTTCTGCAGGTCGCCAAAGGTCTCCACAAGTT...AAACAGAATACAAAGCCACAGAATATGGCTTGGCCTATGGCCATTTTTCTTATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000505127.5
ENST00000509722.5
CDS-3UTR CAA 90 bp TATTGTGGATGGGATGTAGAATATCTGGGTGGGAATGTTTTGTTCATAGAGTCTGACTGCACCAGGACCTaGTCACTTTCATTTCTGTAC +
Preference number: 5 (lower is better)
Translates to: YCGWDVEYLGGNVLFIESDCTRT*SLSFLY
Trigger: GTACAGAAATGAAAGTGACAAGGTCCTGGTGCAGTC...AGACTCTATGAACAAAACATTCCCACCCAGATATTCTACATCCCATCCACAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505127.5
ENST00000509722.5
CDS-3UTR CAA 90 bp GATGTAGAATATCTGGGTGGGAATGTTTTGTTCATAGAGTCTCTTGTTAAATTCCCACATCCCCAGCTTTaGCAGAATCTGCCCTCTGAT +
Preference number: 5 (lower is better)
Translates to: DVEYLGGNVLFIESLVKFPHPQL*QNLPSD
Trigger: ATCAGAGGGCAGATTCTGCAAAAGCTGGGGATGTGG...GAATTTAACAAGAGACTCTATGAACAAAACATTCCCACCCAGATATTCTACATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505127.5
ENST00000509722.5
CDS-3UTR CAA 90 bp TTAAATGCAGGACTTAAAGTGATACTGATCAATTCCTCTTGCAAATCATTGGCCTGTACAGCTTCCCCATaGCTTCCTTACAGAGCTGAC +
Preference number: 5 (lower is better)
Translates to: LNAGLKVILINSSCKSLACTASP*LPYRAD
Trigger: GTCAGCTCTGTAAGGAAGCAATGGGGAAGCTGTACA...GGCCAATGATTTGCAAGAGGAATTGATCAGTATCACTTTAAGTCCTGCATTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp CCTGAGGTCTCCCCAGCCATGTGGAACTGTGAGTTAATTAAACCTCTTTTCTTTACAATGTGGCTTTTCTaGAGTAGTACTCACAGTATC +
Preference number: 5 (lower is better)
Translates to: PEVSPAMWNCELIKPLFFTMWLF*SSTHSI
Trigger: GATACTGTGAGTACTACTCAAGAAAAGCCACATTGT...AAAGAAAAGAGGTTTAATTAACTCACAGTTCCACATGGCTGGGGAGACCTCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CAA 90 bp TTGTGTCCCCACCCAAATCTCATCTCGAATTGTAGTCCCATAATTCCCATGTGTTATTCCTGTGTCTCTTaGACAATGTGGCTTTTCTTG +
Preference number: 5 (lower is better)
Translates to: LCPHPNLISNCSPIIPMCYSCVS*TMWLFL
Trigger: CAAGAAAAGCCACATTGTCAAAGAGACACAGGAATA...ACACATGGGAATTATGGGACTACAATTCGAGATGAGATTTGGGTGGGGACACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504176.6
ENST00000650871.1
CDS-3UTR CAA 90 bp TTAAATGCAGGACTTAAAGTGATACTGATCAATTCCTCTTGCAAATCATTGGCCAACTTGTGGAGACCTTaGGCGACCTGCAGAAGTTTT +
Preference number: 5 (lower is better)
Translates to: LNAGLKVILINSSCKSLANLWRP*ATCRSF
Trigger: AAAACTTCTGCAGGTCGCCAAAGGTCTCCACAAGTT...GGCCAATGATTTGCAAGAGGAATTGATCAGTATCACTTTAAGTCCTGCATTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp AAAGCAGCAACCAAATGCCACACAATTAGCTTTGAACATGCACTTAACAATTACCCCGTTGCTCCATTGTaGCTTATTAGACTGCTCAGA +
Preference number: 5 (lower is better)
Translates to: KAATKCHTISFEHALNNYPVAPL*LIRLLR
Trigger: TCTGAGCAGTCTAATAAGCAACAATGGAGCAACGGG...GTAATTGTTAAGTGCATGTTCAAAGCTAATTGTGTGGCATTTGGTTGCTGCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515330.5
CDS-3UTR CAA 90 bp AAATCAGTAGTATTGTGGATGGGATGTAGAATATCTGGGTGGGAATGTTTTGTTACAGCCAGGTACCCGTaGCTCCATTGTTGCTTATTA +
Preference number: 5 (lower is better)
Translates to: KSVVLWMGCRISGWECFVTARYP*LHCCLL
Trigger: TAATAAGCAACAATGGAGCAACGGGTACCTGGCTGT...AACAAAACATTCCCACCCAGATATTCTACATCCCATCCACAATACTACTGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505127.5
ENST00000509722.5
CDS-3UTR CAA 90 bp GCAGGACTTAAAGTGATACTGATCAATTCCTCTTGCAAATCATTGGCCAGAACCACAATGTGGCTTTTCTaGAGTAGTACTCACAGTATC +
Preference number: 5 (lower is better)
Translates to: AGLKVILINSSCKSLARTTMWLF*SSTHSI
Trigger: GATACTGTGAGTACTACTCAAGAAAAGCCACATTGT...GGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAGTATCACTTTAAGTCCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000509722.5
ENST00000650871.1
CDS-3UTR CAA 90 bp CTAAAATCAGTAGTATTGTGGATGGGATGTAGAATATCTGGGTGGGAATGTTTTGGGCTGTTTTCCATGTaGCTTTCCTTGCAGGACTTA +
Preference number: 5 (lower is better)
Translates to: LKSVVLWMGCRISGWECFGLFSM*LSLQDL
Trigger: TAAGTCCTGCAAGGAAAGCAACATGGAAAACAGCCC...AAAACATTCCCACCCAGATATTCTACATCCCATCCACAATACTACTGATTTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000505127.5
CDS-3UTR CAA 90 bp GCAGGACTTAAAGTGATACTGATCAATTCCTCTTGCAAATCATTGGCCAGAACCCCAGTAGTATCAGTCTaGACAGATAGTGACAAAAAG +
Preference number: 5 (lower is better)
Translates to: AGLKVILINSSCKSLARTPVVSV*TDSDKK
Trigger: CTTTTTGTCACTATCTGTCAAGACTGATACTACTGG...GGTTCTGGCCAATGATTTGCAAGAGGAATTGATCAGTATCACTTTAAGTCCTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000650871.1
CDS TCA 90 bp AAATTCCACAGTGAAACCATGCAGCCAGGCTTTGTAAATGAGCCTTaGGAAATGCAAGTTTTACATGATTGTACCCAGCTTTTGCAGAAT +
Preference number: 5 (lower is better)
Translates to: KFHSETMQPGFVNEP*EMQVLHDCTQLLQN
Trigger: ATTCTGCAAAAGCTGGGTACAATCATGTAAAACTTGCATTTCTCAAGGCTCATTTACAAAGCCTGGCTGCATGGTTTCACTGTGGAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504745.1
ENST00000509209.1
CDS-3UTR CAA 90 bp GATGTAGAATATCTGGGTGGGAATGTTTTGTTCATAGAGTCTCTTGTTAAATTCGACTGCACCAGGACCTaGTCACTTTCATTTCTGTAC +
Preference number: 5 (lower is better)
Translates to: DVEYLGGNVLFIESLVKFDCTRT*SLSFLY
Trigger: GTACAGAAATGAAAGTGACAAGGTCCTGGTGCAGTC...GAATTTAACAAGAGACTCTATGAACAAAACATTCCCACCCAGATATTCTACATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505127.5
ENST00000509722.5
CDS-3UTR CAA 90 bp CATAAGAAAAATGGCCATAGGCCAAGCCATATTCTGTGGCTTTGTATTCTGTTTTCTTTGACATCGCAGTaGGTTTCTGGAAACTCAACA +
Preference number: 5 (lower is better)
Translates to: HKKNGHRPSHILWLCILFSLTSQ*VSGNST
Trigger: TGTTGAGTTTCCAGAAACCAACTGCGATGTCAAAGA...AAACAGAATACAAAGCCACAGAATATGGCTTGGCCTATGGCCATTTTTCTTATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509722.5
CDS-3UTR CAA 90 bp GACTGTGCCGTATTCTATGTGCATGGTTTCTCCATTGAAGGTCTAGTCAAAGAACATCCCTTTATTGTCTaGTCCTCTAAAATCAGTAGT +
Preference number: 5 (lower is better)
Translates to: DCAVFYVHGFSIEGLVKEHPFIV*SSKISS
Trigger: ACTACTGATTTTAGAGGACAAGACAATAAAGGGATG...TTCTTTGACTAGACCTTCAATGGAGAAACCATGCACATAGAATACGGCACAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505127.5
ENST00000509722.5
CDS CCA 90 bp ATGACAGGGTTCATGTTAGACTCACTGACCACTCTTCACTTTTACTaGATTTGGCTTTACAACACAAGATCTTATGGGCAAGTAATGTTT +
Preference number: 5 (lower is better)
Translates to: MTGFMLDSLTTLHFY*IWLYNTRSYGQVMF
Trigger: AAACATTACTTGCCCATAAGATCTTGTGTTGTAAAGCCAAATCCAGTAAAAGTGAAGAGTGGTCAGTGAGTCTAACATGAACCCTGTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509688.5
CDS CCA 90 bp GGGTTCATGTTAGACTCACTGACCACTCTTCACTTTTACTGGATTTaGCTTTACAACACAAGATCTTATGGGCAAGTAATGTTTTTCAAA +
Preference number: 5 (lower is better)
Translates to: GFMLDSLTTLHFYWI*LYNTRSYGQVMFFK
Trigger: TTTGAAAAACATTACTTGCCCATAAGATCTTGTGTTGTAAAGCCAAATCCAGTAAAAGTGAAGAGTGGTCAGTGAGTCTAACATGAACCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509688.5
CDS CCA 90 bp CACTCTTCACTTTTACTGGATTTGGCTTTACAACACAAGATCTTATaGGCAAGTAATGTTTTTCAAACAGCTATTTCCCTCACATTAGTC +
Preference number: 5 (lower is better)
Translates to: HSSLLLDLALQHKIL*ASNVFQTAISLTLV
Trigger: GACTAATGTGAGGGAAATAGCTGTTTGAAAAACATTACTTGCCCATAAGATCTTGTGTTGTAAAGCCAAATCCAGTAAAAGTGAAGAGTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509688.5
CDS TCA 72 bp CCTCAGGGACGCCTGGAGGAACAGCGTGGAACATCGTaGGCCAGGCGGAAACGCTGGCAGGCTGAGGGCCAG +
Preference number: 6 (lower is better)
Translates to: PQGRLEEQRGTS*ARRKRWQAEGQ
Trigger: CTGGCCCTCAGCCTGCCAGCGTTTCCGCCTGGCTCACGATGTTCCACGCTGTTCCTCCAGGCGTCCCTGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505912.1
CDS CCA 72 bp GGATGGAGGCCCTCAGGGACGCCTGGAGGAACAGCGTaGAACATCGTGAGCCAGGCGGAAACGCTGGCAGGC +
Preference number: 6 (lower is better)
Translates to: GWRPSGTPGGTA*NIVSQAETLAG
Trigger: GCCTGCCAGCGTTTCCGCCTGGCTCACGATGTTCCACGCTGTTCCTCCAGGCGTCCCTGAGGGCCTCCATCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505912.1
CDS CCA 72 bp CAGTCCCGAGCGAGGATGGAGGCCCTCAGGGACGCCTaGAGGAACAGCGTGGAACATCGTGAGCCAGGCGGA +
Preference number: 6 (lower is better)
Translates to: QSRARMEALRDA*RNSVEHREPGG
Trigger: TCCGCCTGGCTCACGATGTTCCACGCTGTTCCTCCAGGCGTCCCTGAGGGCCTCCATCCTCGCTCGGGACTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505912.1
CDS TCA 72 bp CCATCCTGCGCCCAGTCTCCTCGATTCCCCTCGCTCTaGGCCGGGAGAGCCGAACAGCTGAAGAGAGTTCAC +
Preference number: 6 (lower is better)
Translates to: PSCAQSPRFPSL*AGRAEQLKRVH
Trigger: GTGAACTCTCTTCAGCTGTTCGGCTCTCCCGGCTCAGAGCGAGGGGAATCGAGGAGACTGGGCGCAGGATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514594.1
CDS CAA 72 bp CCCTCAGGGACGCCTCTGCAGCGCTGGTCCTCGCTCTaGTCCTCTTCCGACACATCTGGCGCTTCCAACAAG +
Preference number: 6 (lower is better)
Translates to: PSGTPLQRWSSL*SSSDTSGASNK
Trigger: CTTGTTGGAAGCGCCAGATGTGTCGGAAGAGGACAAGAGCGAGGACCAGCGCTGCAGAGGCGTCCCTGAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504176.6
ENST00000509722.5
ENST00000515106.1
CDS CAA 72 bp GGACCCCACAAGACTCCTCCCCAGGATTCCTCCCATTaGTCTAGGAGGCGCAGCACTGAGCTCCCTGCCTCC +
Preference number: 6 (lower is better)
Translates to: GPHKTPPQDSSH*SRRRSTELPAS
Trigger: GGAGGCAGGGAGCTCAGTGCTGCGCCTCCTAGACAAATGGGAGGAATCCTGGGGAGGAGTCTTGTGGGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512847.1
CDS GCA 72 bp GAGTTCACGGAGATTCGGGCTTGGCGAATAACCACCTaGGGGGCAATTGGCGTGGCTGGCTGCAACTTGTGG +
Preference number: 6 (lower is better)
Translates to: EFTEIRAWRITT*GAIGVAGCNLW
Trigger: CCACAAGTTGCAGCCAGCCACGCCAATTGCCCCGCAGGTGGTTATTCGCCAAGCCCGAATCTCCGTGAACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000504745.1
ENST00000505127.5
ENST00000505912.1
ENST00000509722.5
ENST00000515106.1
ENST00000515330.5
ENST00000650871.1
CDS GCA 72 bp TGGCCCCTCTCCTTTGCTGCAATCTCTTGGCCCACTTaGTTGGACTGTGTAGGGCAGGAGACCAGGACTGGG +
Preference number: 6 (lower is better)
Translates to: WPLSFAAISWPT*LDCVGQETRTG
Trigger: CCCAGTCCTGGTCTCCTGCCCTACACAGTCCAAGCAAGTGGGCCAAGAGATTGCAGCAAAGGAGAGGGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000458497.6
ENST00000502366.5
ENST00000505176.5
CDS CCA 72 bp TTGGCGAATAACCACCTGCGGGGCAATTGGCGTGGCTaGCTGCAACTTGTGGAGACCTTTGGCGACCTGCAG +
Preference number: 6 (lower is better)
Translates to: LANNHLRGNWRG*LQLVETFGDLQ
Trigger: CTGCAGGTCGCCAAAGGTCTCCACAAGTTGCAGCCAGCCACGCCAATTGCCCCGCAGGTGGTTATTCGCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000504745.1
ENST00000505127.5
ENST00000505912.1
ENST00000509722.5
ENST00000515106.1
ENST00000515330.5
ENST00000650871.1
CDS CCA 72 bp GATTCGGGCTTGGCGAATAACCACCTGCGGGGCAATTaGCGTGGCTGGCTGCAACTTGTGGAGACCTTTGGC +
Preference number: 6 (lower is better)
Translates to: DSGLANNHLRGN*RGWLQLVETFG
Trigger: GCCAAAGGTCTCCACAAGTTGCAGCCAGCCACGCCAATTGCCCCGCAGGTGGTTATTCGCCAAGCCCGAATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000504745.1
ENST00000505127.5
ENST00000505912.1
ENST00000509722.5
ENST00000515106.1
ENST00000515330.5
ENST00000650871.1
CDS CCA 72 bp GCTGGATGGGATCCTGAGTTCACGGAGATTCGGGCTTaGCGAATAACCACCTGCGGGGCAATTGGCGTGGCT +
Preference number: 6 (lower is better)
Translates to: AGWDPEFTEIRA*RITTCGAIGVA
Trigger: AGCCACGCCAATTGCCCCGCAGGTGGTTATTCGCCAAGCCCGAATCTCCGTGAACTCAGGATCCCATCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505912.1
CDS CAA 72 bp CTGGCCCCTCTCCTTTGCTGCAATCTCTTGGCCCACTaGCTTGGACTGTGTAGGGCAGGAGACCAGGACTGG +
Preference number: 6 (lower is better)
Translates to: LAPLLCCNLLAH*LGLCRAGDQDW
Trigger: CCAGTCCTGGTCTCCTGCCCTACACAGTCCAAGCAAGTGGGCCAAGAGATTGCAGCAAAGGAGAGGGGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000458497.6
ENST00000502366.5
ENST00000505176.5
CDS CAA 90 bp ACCTGCGGGGCAATTGGCGTGGCTGGCTGCAACTTGTGGAGACCTTaGGCGACCTGCAGAAGTTTTCCAGAGACGTCGAGCCCATACAGG +
Preference number: 6 (lower is better)
Translates to: TCGAIGVAGCNLWRP*ATCRSFPETSSPYR
Trigger: CCTGTATGGGCTCGACGTCTCTGGAAAACTTCTGCAGGTCGCCAAAGGTCTCCACAAGTTGCAGCCAGCCACGCCAATTGCCCCGCAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000504745.1
ENST00000505127.5
ENST00000505912.1
ENST00000509722.5
ENST00000515106.1
ENST00000515330.5
ENST00000650871.1
CDS CAA 90 bp TGGCGAATAACCACCTGCGGGGCAATTGGCGTGGCTGGCTGCAACTaGTGGAGACCTTTGGCGACCTGCAGAAGTTTTCCAGAGACGTCG +
Preference number: 6 (lower is better)
Translates to: WRITTCGAIGVAGCN*WRPLATCRSFPETS
Trigger: CGACGTCTCTGGAAAACTTCTGCAGGTCGCCAAAGGTCTCCACAAGTTGCAGCCAGCCACGCCAATTGCCCCGCAGGTGGTTATTCGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000504745.1
ENST00000505127.5
ENST00000505912.1
ENST00000509722.5
ENST00000515106.1
ENST00000515330.5
ENST00000650871.1
CDS CAA 90 bp AGCCAAATAGGACCCCACAAGACTCCTCCCCAGGATTCCTCCCATTaGTCTAGGAGGCGCAGCACTGAGCTCCCTGCCTCCCAATCTCCT +
Preference number: 6 (lower is better)
Translates to: SQIGPHKTPPQDSSH*SRRRSTELPASQSP
Trigger: AGGAGATTGGGAGGCAGGGAGCTCAGTGCTGCGCCTCCTAGACAAATGGGAGGAATCCTGGGGAGGAGTCTTGTGGGGTCCTATTTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512847.1
CDS TCA 72 bp TGGAACATCGTGAGCCAGGCGGAAACGCTGGCAGGCTaGGGGCCAGGCTTAGCGTGGGAGGCATTTTCATTA +
Preference number: 6 (lower is better)
Translates to: WNIVSQAETLAG*GPGLAWEAFSL
Trigger: TAATGAAAATGCCTCCCACGCTAAGCCTGGCCCTCAGCCTGCCAGCGTTTCCGCCTGGCTCACGATGTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505912.1
CDS CCA 72 bp ACCTGCGGGGCAATTGGCGTGGCTGGCTGCAACTTGTaGAGACCTTTGGCGACCTGCAGAAGTTTTCCAGAG +
Preference number: 6 (lower is better)
Translates to: TCGAIGVAGCNL*RPLATCRSFPE
Trigger: CTCTGGAAAACTTCTGCAGGTCGCCAAAGGTCTCCACAAGTTGCAGCCAGCCACGCCAATTGCCCCGCAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000504745.1
ENST00000505127.5
ENST00000505912.1
ENST00000509722.5
ENST00000515106.1
ENST00000515330.5
ENST00000650871.1
CDS CAA 72 bp CTGGGGAGTAAAGCTCTGCAGCGCTGGTCCTCGCTCTaGTCCTCTTCCGACACATCTGGCGCTTCCAACAAG +
Preference number: 6 (lower is better)
Translates to: LGSKALQRWSSL*SSSDTSGASNK
Trigger: CTTGTTGGAAGCGCCAGATGTGTCGGAAGAGGACAAGAGCGAGGACCAGCGCTGCAGAGCTTTACTCCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000505127.5
ENST00000509688.5
ENST00000515330.5
ENST00000650871.1
CDS GCA 72 bp GTGGCTGGCTGCAACTTGTGGAGACCTTTGGCGACCTaGAGAAGTTTTCCAGAGACGTCGAGCCCATACAGG +
Preference number: 6 (lower is better)
Translates to: VAGCNLWRPLAT*RSFPETSSPYR
Trigger: CCTGTATGGGCTCGACGTCTCTGGAAAACTTCTGCAGGTCGCCAAAGGTCTCCACAAGTTGCAGCCAGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000504745.1
ENST00000505127.5
ENST00000505912.1
ENST00000509722.5
ENST00000515106.1
ENST00000515330.5
ENST00000650871.1
CDS CCA 72 bp TTTCCTTTGCCTCCTGGATCAGGGTCCTTAACTCGCTaGGGAGTAAAGCTCTGCAGCGCTGGTCCTCGCTCT +
Preference number: 6 (lower is better)
Translates to: FPLPPGSGSLTR*GVKLCSAGPRS
Trigger: AGAGCGAGGACCAGCGCTGCAGAGCTTTACTCCCCAGCGAGTTAAGGACCCTGATCCAGGAGGCAAAGGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000505127.5
ENST00000509688.5
ENST00000515330.5
ENST00000650871.1
CDS CCA 72 bp CAATTGGCGTGGCTGGCTGCAACTTGTGGAGACCTTTaGCGACCTGCAGAAGTTTTCCAGAGACGTCGAGCC +
Preference number: 6 (lower is better)
Translates to: QLAWLAATCGDL*RPAEVFQRRRA
Trigger: GGCTCGACGTCTCTGGAAAACTTCTGCAGGTCGCCAAAGGTCTCCACAAGTTGCAGCCAGCCACGCCAATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000504745.1
ENST00000505127.5
ENST00000505912.1
ENST00000509722.5
ENST00000515106.1
ENST00000515330.5
ENST00000650871.1
CDS CCA 72 bp ATGCCTCACTTGGGGATATCAGAGGAACAGGTGGTGTaGCTCTTCCTACCAGTAACTGCTGCAACCCGGCGC +
Preference number: 6 (lower is better)
Translates to: MPHLGISEEQVV*LFLPVTAATRR
Trigger: GCGCCGGGTTGCAGCAGTTACTGGTAGGAAGAGCCACACCACCTGTTCCTCTGATATCCCCAAGTGAGGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509688.5
CDS CCA 72 bp AGTTGGACAGTATCTGAGTTCACGGAGATTCGGGCTTaGCGAATAACCACCTGCGGGGCAATTGGCGTGGCT +
Preference number: 6 (lower is better)
Translates to: SWTVSEFTEIRA*RITTCGAIGVA
Trigger: AGCCACGCCAATTGCCCCGCAGGTGGTTATTCGCCAAGCCCGAATCTCCGTGAACTCAGATACTGTCCAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515330.5
CDS CAA 72 bp GCCACTTTTCAGGCACGAAGGGCCACTTCATTTCCTTaGCCTCCTGGATCAGGGTCCTTAACTCGCTGGGGA +
Preference number: 6 (lower is better)
Translates to: ATFQARRATSFP*PPGSGSLTRWG
Trigger: TCCCCAGCGAGTTAAGGACCCTGATCCAGGAGGCAAAGGAAATGAAGTGGCCCTTCGTGCCTGAAAAGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000505127.5
ENST00000509688.5
ENST00000515330.5
ENST00000650871.1
CDS GCA 72 bp CCAGGTCTCAGCACGTCAGTCCCTGTGTGTTTAATGTaGAGGCAGGAGGAAAACTGGAGAAGCCAGGACAGA +
Preference number: 6 (lower is better)
Translates to: PGLSTSVPVCLM*RQEENWRSQDR
Trigger: TCTGTCCTGGCTTCTCCAGTTTTCCTCCTGCCTGCACATTAAACACACAGGGACTGACGTGCTGAGACCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000458497.6
ENST00000502366.5
ENST00000505176.5
CDS GCA 72 bp GGAACAGGTGGTGTGGCTCTTCCTACCAGTAACTGCTaGAACCCGGCGCCAATCACATCCTTCAGGTTTGTT +
Preference number: 6 (lower is better)
Translates to: GTGGVALPTSNC*NPAPITSFRFV
Trigger: AACAAACCTGAAGGATGTGATTGGCGCCGGGTTGCAGCAGTTACTGGTAGGAAGAGCCACACCACCTGTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509688.5
CDS GCA 72 bp AGAGGAACAGGTGGTGTGGCTCTTCCTACCAGTAACTaGTGCAACCCGGCGCCAATCACATCCTTCAGGTTT +
Preference number: 6 (lower is better)
Translates to: RGTGGVALPTSN*CNPAPITSFRF
Trigger: AAACCTGAAGGATGTGATTGGCGCCGGGTTGCAGCAGTTACTGGTAGGAAGAGCCACACCACCTGTTCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509688.5
CDS CCA 72 bp TCAGGCACGAAGGGCCACTTCATTTCCTTTGCCTCCTaGATCAGGGTCCTTAACTCGCTGGGGAGTAAAGCT +
Preference number: 6 (lower is better)
Translates to: SGTKGHFISFAS*IRVLNSLGSKA
Trigger: AGCTTTACTCCCCAGCGAGTTAAGGACCCTGATCCAGGAGGCAAAGGAAATGAAGTGGCCCTTCGTGCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000505127.5
ENST00000509688.5
ENST00000515330.5
ENST00000650871.1
CDS CAA 72 bp ACTGCTGCAACCCGGCGCCAATCACATCCTTCAGGTTaGTTTTGTCCTCTGGGCCCACGGCTTGTTTGTACT +
Preference number: 6 (lower is better)
Translates to: TAATRRQSHPSG*FCPLGPRLVCT
Trigger: AGTACAAACAAGCCGTGGGCCCAGAGGACAAAACAAACCTGAAGGATGTGATTGGCGCCGGGTTGCAGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000505127.5
ENST00000509688.5
ENST00000515330.5
ENST00000650871.1
CDS CAA 90 bp AGTAACTGCTGCAACCCGGCGCCAATCACATCCTTCAGGTTTGTTTaGTCCTCTGGGCCCACGGCTTGTTTGTACTGCCACTTTTCAGGC +
Preference number: 6 (lower is better)
Translates to: SNCCNPAPITSFRFV*SSGPTACLYCHFSG
Trigger: GCCTGAAAAGTGGCAGTACAAACAAGCCGTGGGCCCAGAGGACAAAACAAACCTGAAGGATGTGATTGGCGCCGGGTTGCAGCAGTTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000505127.5
ENST00000509688.5
ENST00000515330.5
ENST00000650871.1
CDS CAA 90 bp ACGCCAGTAACTGCTGCAACCCGGCGCCAATCACATCCTTCAGGTTaGTTTTGTCCTCTGGGCCCACGGCTTGTTTGTACTGCCACTTTT +
Preference number: 6 (lower is better)
Translates to: TPVTAATRRQSHPSG*FCPLGPRLVCTATF
Trigger: AAAAGTGGCAGTACAAACAAGCCGTGGGCCCAGAGGACAAAACAAACCTGAAGGATGTGATTGGCGCCGGGTTGCAGCAGTTACTGGCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000505127.5
ENST00000515330.5
ENST00000650871.1
CDS TCA 72 bp TCCTCTTCCGACACATCTGGCGCTTCCAACAAGAGCTaGTCCAGCACTTGCTTGCACTCTTGCAGTAGCACA +
Preference number: 6 (lower is better)
Translates to: SSSDTSGASNKS*SSTCLHSCSST
Trigger: TGTGCTACTGCAAGAGTGCAAGCAAGTGCTGGATCAGCTCTTGTTGGAAGCGCCAGATGTGTCGGAAGAGGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509688.5
ENST00000509722.5
ENST00000515106.1
ENST00000515330.5
ENST00000650871.1
CDS CAA 72 bp TTCAGGTTTGTTTTGTCCTCTGGGCCCACGGCTTGTTaGTACTGCCACTTTTCAGGCACGAAGGGCCACTTC +
Preference number: 6 (lower is better)
Translates to: FRFVLSSGPTAC*YCHFSGTKGHF
Trigger: GAAGTGGCCCTTCGTGCCTGAAAAGTGGCAGTACAAACAAGCCGTGGGCCCAGAGGACAAAACAAACCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000505127.5
ENST00000509688.5
ENST00000515330.5
ENST00000650871.1
CDS CAA 72 bp ATCCTTCAGGTTTGTTTTGTCCTCTGGGCCCACGGCTaGTTTGTACTGCCACTTTTCAGGCACGAAGGGCCA +
Preference number: 6 (lower is better)
Translates to: ILQVCFVLWAHG*FVLPLFRHEGP
Trigger: TGGCCCTTCGTGCCTGAAAAGTGGCAGTACAAACAAGCCGTGGGCCCAGAGGACAAAACAAACCTGAAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000505127.5
ENST00000509688.5
ENST00000515330.5
ENST00000650871.1
CDS CAA 90 bp GTTTGTACTGCCACTTTTCAGGCACGAAGGGCCACTTCATTTCCTTaGCCTCCTGGATCAGGGTCCTTAACTCGCTGGGGAGTAAAGCTC +
Preference number: 6 (lower is better)
Translates to: VCTATFQARRATSFP*PPGSGSLTRWGVKL
Trigger: GAGCTTTACTCCCCAGCGAGTTAAGGACCCTGATCCAGGAGGCAAAGGAAATGAAGTGGCCCTTCGTGCCTGAAAAGTGGCAGTACAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000505127.5
ENST00000509688.5
ENST00000515330.5
ENST00000650871.1
CDS CAA 90 bp CTACCAGTAACTGCTGCAACCCGGCGCCAATCACATCCTTCAGGTTaGTTTTGTCCTCTGGGCCCACGGCTTGTTTGTACTGCCACTTTT +
Preference number: 6 (lower is better)
Translates to: LPVTAATRRQSHPSG*FCPLGPRLVCTATF
Trigger: AAAAGTGGCAGTACAAACAAGCCGTGGGCCCAGAGGACAAAACAAACCTGAAGGATGTGATTGGCGCCGGGTTGCAGCAGTTACTGGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509688.5
CDS CAA 90 bp GACCCTCTCCACTATATCCCCATTCAGTCTCTCTGCCCTTCCCCCTaGCTTGCCACTCTACTCTTTCCTGCAAACAGTGGCTCTCAAACT +
Preference number: 6 (lower is better)
Translates to: DPLHYIPIQSLCPSP*LATLLFPANSGSQT
Trigger: AGTTTGAGAGCCACTGTTTGCAGGAAAGAGTAGAGTGGCAAGCAAGGGGGAAGGGCAGAGAGACTGAATGGGGATATAGTGGAGAGGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509688.5
CDS CAA 90 bp GCCAATCACATCCTTCAGGTTTGTTTTGTCCTCTGGGCCCACGGCTaGTTTGTACTGCCACTTTTCAGGCACGAAGGGCCACTTCATTTC +
Preference number: 6 (lower is better)
Translates to: ANHILQVCFVLWAHG*FVLPLFRHEGPLHF
Trigger: GAAATGAAGTGGCCCTTCGTGCCTGAAAAGTGGCAGTACAAACAAGCCGTGGGCCCAGAGGACAAAACAAACCTGAAGGATGTGATTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000505127.5
ENST00000509688.5
ENST00000515330.5
ENST00000650871.1
CDS TCA 72 bp GTGGTGGAGGAGTCCTTCAAAGGATACGATGAACCGTaGACCCCACTGTCTGAATTTACCAGGTCTCAGCAC +
Preference number: 6 (lower is better)
Translates to: VVEESFKGYDEP*TPLSEFTRSQH
Trigger: GTGCTGAGACCTGGTAAATTCAGACAGTGGGGTTCACGGTTCATCGTATCCTTTGAAGGACTCCTCCACCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502366.5
ENST00000505176.5
CDS GCA 72 bp TTTGTTTTGTCCTCTGGGCCCACGGCTTGTTTGTACTaGCACTTTTCAGGCACGAAGGGCCACTTCATTTCC +
Preference number: 6 (lower is better)
Translates to: FVLSSGPTACLY*HFSGTKGHFIS
Trigger: GGAAATGAAGTGGCCCTTCGTGCCTGAAAAGTGGCAGTACAAACAAGCCGTGGGCCCAGAGGACAAAACAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000505127.5
ENST00000509688.5
ENST00000515330.5
ENST00000650871.1
CDS GCA 72 bp ACTATATCCCCATTCAGTCTCTCTGCCCTTCCCCCTTaGTTGCCACTCTACTCTTTCCTGCAAACAGTGGCT +
Preference number: 6 (lower is better)
Translates to: TISPFSLSALPP*LPLYSFLQTVA
Trigger: AGCCACTGTTTGCAGGAAAGAGTAGAGTGGCAAGCAAGGGGGAAGGGCAGAGAGACTGAATGGGGATATAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509688.5
CDS CCA 72 bp CAGAATCATCTGGAGGGCTTCTCTAATGCTGATTGCTaGACTCCCACCCCCAGGGTGTTTGATTCAGTAAGG +
Preference number: 6 (lower is better)
Translates to: QNHLEGFSNADC*TPTPRVFDSVR
Trigger: CCTTACTGAATCAAACACCCTGGGGGTGGGAGTCCAGCAATCAGCATTAGAGAAGCCCTCCAGATGATTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509688.5
CDS CAA 90 bp AGAATCTGCCCTCTGATCTGTATACAGACCGACTGCACCAGGACCTaGTCACTTTCATTTCTGTACAGCCAGGTACCCGTTGCTCCATTG +
Preference number: 6 (lower is better)
Translates to: RICPLICIQTDCTRT*SLSFLYSQVPVAPL
Trigger: CAATGGAGCAACGGGTACCTGGCTGTACAGAAATGAAAGTGACAAGGTCCTGGTGCAGTCGGTCTGTATACAGATCAGAGGGCAGATTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000504745.1
ENST00000505127.5
ENST00000509209.1
ENST00000509722.5
ENST00000650871.1
CDS CAA 90 bp AGAATCTGCCCTCTGATCTGTATACAGACCGACTGCACCAGGACCTaGTCACTTTCATTTCTGTACAGCCAGGTACCACTAGCCCTGCTT +
Preference number: 6 (lower is better)
Translates to: RICPLICIQTDCTRT*SLSFLYSQVPLALL
Trigger: AAGCAGGGCTAGTGGTACCTGGCTGTACAGAAATGAAAGTGACAAGGTCCTGGTGCAGTCGGTCTGTATACAGATCAGAGGGCAGATTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508589.1
CDS TCA 72 bp AGACGGGTATTTACTTTTGTCTCTTCCGAGGCAGGCTaGGGGTGTTGCTGTCTGCCAGTTTCTGTAGTGCAT +
Preference number: 6 (lower is better)
Translates to: RRVFTFVSSEAG*GCCCLPVSVVH
Trigger: ATGCACTACAGAAACTGGCAGACAGCAACACCCTCAGCCTGCCTCGGAAGAGACAAAAGTAAATACCCGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502366.5
CDS GCA 72 bp CTGGCGCTTCCAACAAGAGCTGATCCAGCACTTGCTTaGACTCTTGCAGTAGCACAGCTACCACTTTTTGAT +
Preference number: 6 (lower is better)
Translates to: LALPTRADPALA*TLAVAQLPLFD
Trigger: ATCAAAAAGTGGTAGCTGTGCTACTGCAAGAGTGCAAGCAAGTGCTGGATCAGCTCTTGTTGGAAGCGCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000505127.5
ENST00000509688.5
ENST00000509722.5
ENST00000515106.1
ENST00000515330.5
ENST00000650871.1
CDS GCA 72 bp CAAAGCCTGAATCCTGAGCTGCAATCTGAGTTCCTGTaGTACTCCCCAGGCTCTCTTCTATCTGGCATAGAA +
Preference number: 6 (lower is better)
Translates to: QSLNPELQSEFL*YSPGSLLSGIE
Trigger: TTCTATGCCAGATAGAAGAGAGCCTGGGGAGTAGCACAGGAACTCAGATTGCAGCTCAGGATTCAGGCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509688.5
CDS GCA 72 bp CATCAGAATCATCTGGAGGGCTTCTCTAATGCTGATTaGTGGACTCCCACCCCCAGGGTGTTTGATTCAGTA +
Preference number: 6 (lower is better)
Translates to: HQNHLEGFSNAD*WTPTPRVFDSV
Trigger: TACTGAATCAAACACCCTGGGGGTGGGAGTCCAGCAATCAGCATTAGAGAAGCCCTCCAGATGATTCTGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509688.5
CDS CAA 72 bp CCTCTGATCTGTATACAGACCGACTGCACCAGGACCTaGTCACTTTCATTTCTGTACAGCCAGGTACCCGTT +
Preference number: 6 (lower is better)
Translates to: PLICIQTDCTRT*SLSFLYSQVPV
Trigger: AACGGGTACCTGGCTGTACAGAAATGAAAGTGACAAGGTCCTGGTGCAGTCGGTCTGTATACAGATCAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000504745.1
ENST00000505127.5
ENST00000509209.1
ENST00000509722.5
ENST00000650871.1
CDS CAA 90 bp ATCACATCCTTCAGGTTTGTTTTGTCCTCTGGGCCCACGGCTTGTTaGTACTGCCACTTTTCAGGCACGAAGGGCCACTTCATTTCCTTT +
Preference number: 6 (lower is better)
Translates to: ITSFRFVLSSGPTAC*YCHFSGTKGHFISF
Trigger: AAAGGAAATGAAGTGGCCCTTCGTGCCTGAAAAGTGGCAGTACAAACAAGCCGTGGGCCCAGAGGACAAAACAAACCTGAAGGATGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000505127.5
ENST00000509688.5
ENST00000515330.5
ENST00000650871.1
CDS GCA 72 bp TGCAGAATCTGCCCTCTGATCTGTATACAGACCGACTaGACCAGGACCTTGTCACTTTCATTTCTGTACAGC +
Preference number: 6 (lower is better)
Translates to: CRICPLICIQTD*TRTLSLSFLYS
Trigger: GCTGTACAGAAATGAAAGTGACAAGGTCCTGGTGCAGTCGGTCTGTATACAGATCAGAGGGCAGATTCTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000177648.13
ENST00000458497.6
ENST00000504176.6
ENST00000504745.1
ENST00000505127.5
ENST00000508589.1
ENST00000509209.1
ENST00000509722.5
ENST00000650871.1
CDS CAA 72 bp CCTCTGATCTGTATACAGACCGACTGCACCAGGACCTaGTCACTTTCATTTCTGTACAGCCAGGTACCACTA +
Preference number: 6 (lower is better)
Translates to: PLICIQTDCTRT*SLSFLYSQVPL
Trigger: TAGTGGTACCTGGCTGTACAGAAATGAAAGTGACAAGGTCCTGGTGCAGTCGGTCTGTATACAGATCAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508589.1
CDS TCA 72 bp CAGTTCTTCGGTCCCATTCACCACATTTCAAGTGCTTaGGAGCCATCTGTAGCTAGTGGCTACCATATTGAA +
Preference number: 6 (lower is better)
Translates to: QFFGPIHHISSA*EPSVASGYHIE
Trigger: TTCAATATGGTAGCCACTAGCTACAGATGGCTCTCAAGCACTTGAAATGTGGTGAATGGGACCGAAGAACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509688.5
CDS CCA 72 bp AATCTATTAGACCACTTAGAGTCTAAATGCCTCACTTaGGGATATCAGAGGAACAGGTGGTGTGGCTCTTCC +
Preference number: 6 (lower is better)
Translates to: NLLDHLESKCLT*GYQRNRWCGSS
Trigger: GGAAGAGCCACACCACCTGTTCCTCTGATATCCCCAAGTGAGGCATTTAGACTCTAAGTGGTCTAATAGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509688.5
CDS CCA 72 bp CTCTTCACTTGGTGCTTCCTGATGGAGAATTGGAGTTaGATGAAGGAGAAGGCTGTAAGTCACAATTTCACC +
Preference number: 6 (lower is better)
Translates to: LFTWCFLMENWS*MKEKAVSHNFT
Trigger: GGTGAAATTGTGACTTACAGCCTTCTCCTTCATCCAACTCCAATTCTCCATCAGGAAGCACCAAGTGAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509688.5
CDS CCA 72 bp AAACAGTGGCTCTCAAACTTTAGCATCAGAATCATCTaGAGGGCTTCTCTAATGCTGATTGCTGGACTCCCA +
Preference number: 6 (lower is better)
Translates to: KQWLSNFSIRII*RASLMLIAGLP
Trigger: TGGGAGTCCAGCAATCAGCATTAGAGAAGCCCTCCAGATGATTCTGATGCTAAAGTTTGAGAGCCACTGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509688.5
CDS TCA 72 bp TGGGAGAAGATTCTGCACGTGCTCAGTCCTCCATGTTaGTGGAATTGGAAATCTGAGCCTTTATCTGTAACT +
Preference number: 6 (lower is better)
Translates to: WEKILHVLSPPC*WNWKSEPLSVT
Trigger: AGTTACAGATAAAGGCTCAGATTTCCAATTCCATCAACATGGAGGACTGAGCACGTGCAGAATCTTCTCCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505912.1
CDS CCA 72 bp TTCAAGCTCTTCACTTGGTGCTTCCTGATGGAGAATTaGAGTTGGATGAAGGAGAAGGCTGTAAGTCACAAT +
Preference number: 6 (lower is better)
Translates to: FKLFTWCFLMEN*SWMKEKAVSHN
Trigger: ATTGTGACTTACAGCCTTCTCCTTCATCCAACTCCAATTCTCCATCAGGAAGCACCAAGTGAAGAGCTTGAA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509688.5
CDS CCA 72 bp ATAGCCACTGCTTTAGAGCTGCACTGTCCAATAAAATaGCAGCCCTGGCCACATGTGACTATTTACATAGAA +
Preference number: 6 (lower is better)
Translates to: IATALELHCPIK*QPWPHVTIYIE
Trigger: TTCTATGTAAATAGTCACATGTGGCCAGGGCTGCCATTTTATTGGACAGTGCAGCTCTAAAGCAGTGGCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509688.5
CDS TCA 72 bp ATTCATTCATTCACCAGTAACTTTCTGAGCACTCTCTaGGTGTCTGTTACAGTGCTAGGCGCTGGGATAATA +
Preference number: 6 (lower is better)
Translates to: IHSFTSNFLSTL*VSVTVLGAGII
Trigger: TATTATCCCAGCGCCTAGCACTGTAACAGACACTCAGAGAGTGCTCAGAAAGTTACTGGTGAATGAATGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512847.1
CDS GCA 72 bp GAGAAATGCAAGTTTTACATGATTGTACCCAGCTTTTaGAGAATCTGCCCTCTGATCTGTATACAGACCGAC +
Preference number: 6 (lower is better)
Translates to: EKCKFYMIVPSF*RICPLICIQTD
Trigger: GTCGGTCTGTATACAGATCAGAGGGCAGATTCTGCAAAAGCTGGGTACAATCATGTAAAACTTGCATTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504745.1
ENST00000509209.1
CDS CAA 72 bp GATTTTTCTCATTTGACCGGAGGAGATGGCCCTCTCTaGCAGCTGATATCATATTTCAGTGCATTCTCTTTG +
Preference number: 6 (lower is better)
Translates to: DFSHLTGGDGPL*QLISYFSAFSL
Trigger: CAAAGAGAATGCACTGAAATATGATATCAGCTGCAAGAGAGGGCCATCTCCTCCGGTCAAATGAGAAAAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502366.5
CDS TCA 72 bp AGTGAAACCATGCAGCCAGGCTTTGTAAATGAGCCTTaGGAAATGCAAGTTTTACATGATTGTACCCAGCTT +
Preference number: 6 (lower is better)
Translates to: SETMQPGFVNEP*EMQVLHDCTQL
Trigger: AAGCTGGGTACAATCATGTAAAACTTGCATTTCTCAAGGCTCATTTACAAAGCCTGGCTGCATGGTTTCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504745.1
ENST00000509209.1
CDS GCA 72 bp AGATGGCCCTCTCTTGCAGCTGATATCATATTTCAGTaGATTCTCTTTGAGACGGGTATTTACTTTTGTCTC +
Preference number: 6 (lower is better)
Translates to: RWPSLAADIIFQ*ILFETGIYFCL
Trigger: GAGACAAAAGTAAATACCCGTCTCAAAGAGAATGCACTGAAATATGATATCAGCTGCAAGAGAGGGCCATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502366.5
CDS CAA 72 bp CTCTTGCAGCTGATATCATATTTCAGTGCATTCTCTTaGAGACGGGTATTTACTTTTGTCTCTTCCGAGGCA +
Preference number: 6 (lower is better)
Translates to: LLQLISYFSAFS*RRVFTFVSSEA
Trigger: TGCCTCGGAAGAGACAAAAGTAAATACCCGTCTCAAAGAGAATGCACTGAAATATGATATCAGCTGCAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502366.5
CDS CAA 90 bp GGTTTTCTAGTTAAAACGAAGTCAAGAGAAATGACATCAGATATCTaGAATGAAGTGGTGGAGGAGTCCTTCAAAGGATACGATGAACCG +
Preference number: 6 (lower is better)
Translates to: GFLVKTKSREMTSDI*NEVVEESFKGYDEP
Trigger: CGGTTCATCGTATCCTTTGAAGGACTCCTCCACCACTTCATTCAAGATATCTGATGTCATTTCTCTTGACTTCGTTTTAACTAGAAAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502366.5
CDS TCA 72 bp TTTTGTAGCCTGTGCAAACCTTTAAGAATTCCAGCTTaGTGCAAATATTTTACTTCTCACATGGGCACAAGG +
Preference number: 6 (lower is better)
Translates to: FCSLCKPLRIPA*CKYFTSHMGTR
Trigger: CCTTGTGCCCATGTGAGAAGTAAAATATTTGCATCAAGCTGGAATTCTTAAAGGTTTGCACAGGCTACAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505912.1
CDS CCA 72 bp TTAGACTCACTGACCACTCTTCACTTTTACTGGATTTaGCTTTACAACACAAGATCTTATGGGCAAGTAATG +
Preference number: 6 (lower is better)
Translates to: LDSLTTLHFYWI*LYNTRSYGQVM
Trigger: CATTACTTGCCCATAAGATCTTGTGTTGTAAAGCCAAATCCAGTAAAAGTGAAGAGTGGTCAGTGAGTCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509688.5
CDS CAA 72 bp GTTAAAACGAAGTCAAGAGAAATGACATCAGATATCTaGAATGAAGTGGTGGAGGAGTCCTTCAAAGGATAC +
Preference number: 6 (lower is better)
Translates to: VKTKSREMTSDI*NEVVEESFKGY
Trigger: GTATCCTTTGAAGGACTCCTCCACCACTTCATTCAAGATATCTGATGTCATTTCTCTTGACTTCGTTTTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502366.5
CDS CAA 72 bp GTTAGACTCACTGACCACTCTTCACTTTTACTGGATTaGGCTTTACAACACAAGATCTTATGGGCAAGTAAT +
Preference number: 6 (lower is better)
Translates to: VRLTDHSSLLLD*ALQHKILWASN
Trigger: ATTACTTGCCCATAAGATCTTGTGTTGTAAAGCCAAATCCAGTAAAAGTGAAGAGTGGTCAGTGAGTCTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509688.5
CDS CAA 72 bp ATTTCTGACCAGATTTCAGATGATGCTAATCTATTGTaGGGAGGTCTCACATTTATAGCCACTGCTTTAGAG +
Preference number: 6 (lower is better)
Translates to: ISDQISDDANLL*GGLTFIATALE
Trigger: CTCTAAAGCAGTGGCTATAAATGTGAGACCTCCCAACAATAGATTAGCATCATCTGAAATCTGGTCAGAAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509688.5
CDS CAA 90 bp AGGGTTCATGTTAGACTCACTGACCACTCTTCACTTTTACTGGATTaGGCTTTACAACACAAGATCTTATGGGCAAGTAATGTTTTTCAA +
Preference number: 6 (lower is better)
Translates to: RVHVRLTDHSSLLLD*ALQHKILWASNVFQ
Trigger: TTGAAAAACATTACTTGCCCATAAGATCTTGTGTTGTAAAGCCAAATCCAGTAAAAGTGAAGAGTGGTCAGTGAGTCTAACATGAACCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509688.5
CDS TCA 72 bp GATTCAGTAAGGGTTTTTGATTTGCACCCAAGAATTTaGATTTCTGACCAGATTTCAGATGATGCTAATCTA +
Preference number: 6 (lower is better)
Translates to: DSVRVFDLHPRI*ISDQISDDANL
Trigger: TAGATTAGCATCATCTGAAATCTGGTCAGAAATTCAAATTCTTGGGTGCAAATCAAAAACCCTTACTGAATC
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509688.5