Pregenerated sensors for ALPG (Homo sapiens)
Ensembl gene IDs: ENSG00000163286Ensembl transcript IDs: ENST00000295453.8
Found 39 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | CCCGGGGAGAGAGCCTGCCTGATCCACCTCAGGATATGGGCGGGGGCTGGATGGGGTGACAGCTCCAGGTaGAGGTCCGGCAGGACGACT | + |
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Preference number: 2 (lower is better) Translates to: PGERACLIHLRIWAGAGWGDSSR*RSGRTT Trigger: AGTCGTCCTGCCGGACCTCCACCTGGAGCTGTCACC...CCATCCAGCCCCCGCCCATATCCTGAGGTGGATCAGGCAGGCTCTCTCCCCGGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000295453.8 |
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| 3UTR-3UTR TCA 90 bp | CTCCTCGGAACTCAGGTGGGTGCTGGAATGGACCTTAGGGGGCGTCGAACATCTTGGCGACTCCGGGGGTaGCAGCTCCAGGTGGAGGTC | + |
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Preference number: 2 (lower is better) Translates to: LLGTQVGAGMDLRGRRTSWRLRG*QLQVEV Trigger: GACCTCCACCTGGAGCTGTCACCCCCGGAGTCGCCA...AGATGTTCGACGCCCCCTAAGGTCCATTCCAGCACCCACCTGAGTTCCGAGGAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000295453.8 |
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| 3UTR-3UTR GCA 90 bp | CTCCTCGGAACTCAGGTGGGTGCTGGAATGGACCTTAGGGGGCGTCGAACATCTCCCGGGGAGAGAGCCTaGCTGATCCACCTCAGGATA | + |
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Preference number: 2 (lower is better) Translates to: LLGTQVGAGMDLRGRRTSPGERA*LIHLRI Trigger: TATCCTGAGGTGGATCAGGCAGGCTCTCTCCCCGGG...AGATGTTCGACGCCCCCTAAGGTCCATTCCAGCACCCACCTGAGTTCCGAGGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295453.8 |
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| 3UTR-3UTR CCA 90 bp | TCCTCTTTTCCTGAAATGCAGGCAGCTGCCAGGCACAAATCCCCAGTCCCTGGACAGGACGACTGGAGGTaGGGAGCAGGGGAACTCCGG | + |
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Preference number: 2 (lower is better) Translates to: SSFPEMQAAARHKSPVPGQDDWR*GAGELR Trigger: CCGGAGTTCCCCTGCTCCCCACCTCCAGTCGTCCTG...TCCAGGGACTGGGGATTTGTGCCTGGCAGCTGCCTGCATTTCAGGAAAAGAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000295453.8 |
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| 3UTR-3UTR CCA 90 bp | GAGAGAGCCTGCCTGATCCACCTCAGGATATGGGCGGGGGCTGGATGGTCTGAGATAAAGCAAAGGGCGTaGTGTCAAGGGCTCGGTCCC | + |
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Preference number: 2 (lower is better) Translates to: ERACLIHLRIWAGAGWSEIKQRA*CQGLGP Trigger: GGGACCGAGCCCTTGACACCACGCCCTTTGCTTTAT...CTCAGACCATCCAGCCCCCGCCCATATCCTGAGGTGGATCAGGCAGGCTCTCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000295453.8 |
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| 3UTR-3UTR TCA 90 bp | CTCCTCGGAACTCAGGTGGGTGCTGGAATGGACCTTAGGGGGCGTCGAACATCTTTCTCCAAGGCGTCCTaGTGCACCCAAGTCCTTGTG | + |
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Preference number: 2 (lower is better) Translates to: LLGTQVGAGMDLRGRRTSFSKAS*CTQVLV Trigger: CACAAGGACTTGGGTGCATCAGGACGCCTTGGAGAA...AGATGTTCGACGCCCCCTAAGGTCCATTCCAGCACCCACCTGAGTTCCGAGGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000295453.8 |
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| 3UTR-3UTR CCA 90 bp | CTCCTCGGAACTCAGGTGGGTGCTGGAATGGACCTTAGGGGGCGTCGAACATCTCCCAGTCCCTGGAGTTaGGGCCAAAATTTCAAGAGC | + |
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Preference number: 2 (lower is better) Translates to: LLGTQVGAGMDLRGRRTSPSPWS*GQNFKS Trigger: GCTCTTGAAATTTTGGCCCCAACTCCAGGGACTGGG...AGATGTTCGACGCCCCCTAAGGTCCATTCCAGCACCCACCTGAGTTCCGAGGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295453.8 |
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| 3UTR CCA 72 bp | CCCAGGTGCTCCTCGGAACTCAGGTGGGTGCTGGAATaGACCTTAGGGGGCGTCGAACATCTGAGTGGCTGT | + |
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Preference number: 3 (lower is better) Translates to: PRCSSELRWVLE*TLGGVEHLSGC Trigger: ACAGCCACTCAGATGTTCGACGCCCCCTAAGGTCCATTCCAGCACCCACCTGAGTTCCGAGGAGCACCTGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000295453.8 |
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| 3UTR CCA 72 bp | TGCCTGATCCACCTCAGGATATGGGCGGGGGCTGGATaGTCTGAGCCTCCTCTTTTCCTGAAATGCAGGCAG | + |
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Preference number: 3 (lower is better) Translates to: CLIHLRIWAGAG*SEPPLFLKCRQ Trigger: CTGCCTGCATTTCAGGAAAAGAGGAGGCTCAGACCATCCAGCCCCCGCCCATATCCTGAGGTGGATCAGGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295453.8 |
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| 3UTR CCA 72 bp | GGCAGCTGCCAGGCACAAATCCCCAGTCCCTGGAGTTaGGGCCAAAATTTCAAGAGCAAGATAAAGCAAAGG | + |
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Preference number: 3 (lower is better) Translates to: GSCQAQIPSPWS*GQNFKSKIKQR Trigger: CCTTTGCTTTATCTTGCTCTTGAAATTTTGGCCCCAACTCCAGGGACTGGGGATTTGTGCCTGGCAGCTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295453.8 |
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| CDS-3UTR TCA 90 bp | CCCGGGGAGAGAGCCTGCCTGATCCACCTCAGGATATGGGCGGGGGCTGGATGGGGGAGAGAGCCTGCCTaGTCCACCTCAGGATATGGG | + |
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Preference number: 4 (lower is better) Translates to: PGERACLIHLRIWAGAGWGREPA*STSGYG Trigger: CCCATATCCTGAGGTGGATCAGGCAGGCTCTCTCCC...CCATCCAGCCCCCGCCCATATCCTGAGGTGGATCAGGCAGGCTCTCTCCCCGGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000295453.8 |
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| CDS-3UTR CCA 90 bp | GGGGAGAGAGCCTGCCTGATCCACCTCAGGATATGGGCGGGGGCTGGATGGTCTACGTACCGGGCACCCTaGTGCTTCGCCAGCCATTCC | + |
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Preference number: 4 (lower is better) Translates to: GERACLIHLRIWAGAGWSTYRAP*CFASHS Trigger: GGAATGGCTGGCGAAGCACCAGGGTGCCCGGTACGT...AGACCATCCAGCCCCCGCCCATATCCTGAGGTGGATCAGGCAGGCTCTCTCCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295453.8 |
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| CDS-3UTR CCA 90 bp | CCTGAAATGCAGGCAGCTGCCAGGCACAAATCCCCAGTCCCTGGAGTTGGGGCCCAGGACGACTGGAGGTaGGGAGCAGGGGAACTCCGG | + |
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Preference number: 4 (lower is better) Translates to: PEMQAAARHKSPVPGVGAQDDWR*GAGELR Trigger: CCGGAGTTCCCCTGCTCCCCACCTCCAGTCGTCCTG...GGCCCCAACTCCAGGGACTGGGGATTTGTGCCTGGCAGCTGCCTGCATTTCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000295453.8 |
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| CDS-3UTR CCA 90 bp | CCCGGGGAGAGAGCCTGCCTGATCCACCTCAGGATATGGGCGGGGGCTGGATGGATCCACCTCAGGATATaGGCGGGGGCTGGATGGTCT | + |
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Preference number: 4 (lower is better) Translates to: PGERACLIHLRIWAGAGWIHLRI*AGAGWS Trigger: AGACCATCCAGCCCCCGCCCATATCCTGAGGTGGAT...CCATCCAGCCCCCGCCCATATCCTGAGGTGGATCAGGCAGGCTCTCTCCCCGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000295453.8 |
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| CDS-3UTR CCA 90 bp | GGGGAGAGAGCCTGCCTGATCCACCTCAGGATATGGGCGGGGGCTGGATGGTCTCCACAGCAGCCTCCTTaGCTGGGAGGGTGGGTTGCA | + |
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Preference number: 4 (lower is better) Translates to: GERACLIHLRIWAGAGWSPQQPP*LGGWVA Trigger: TGCAACCCACCCTCCCAGCCAAGGAGGCTGCTGTGG...AGACCATCCAGCCCCCGCCCATATCCTGAGGTGGATCAGGCAGGCTCTCTCCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295453.8 |
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| CDS-3UTR TCA 90 bp | CCCGGGGAGAGAGCCTGCCTGATCCACCTCAGGATATGGGCGGGGGCTGGATGGTTCTCCAAGGCGTCCTaGTGCACCCAAGTCCTTGTG | + |
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Preference number: 4 (lower is better) Translates to: PGERACLIHLRIWAGAGWFSKAS*CTQVLV Trigger: CACAAGGACTTGGGTGCATCAGGACGCCTTGGAGAA...CCATCCAGCCCCCGCCCATATCCTGAGGTGGATCAGGCAGGCTCTCTCCCCGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295453.8 |
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| CDS-3UTR GCA 90 bp | CCTGAAATGCAGGCAGCTGCCAGGCACAAATCCCCAGTCCCTGGAGTTGGGGCCAGCACCCAGGGCCCCTaGATGTCTGGAAGCAGTCGG | + |
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Preference number: 4 (lower is better) Translates to: PEMQAAARHKSPVPGVGASTQGP*MSGSSR Trigger: CCGACTGCTTCCAGACATGCAGGGGCCCTGGGTGCT...GGCCCCAACTCCAGGGACTGGGGATTTGTGCCTGGCAGCTGCCTGCATTTCAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000295453.8 |
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| CDS-3UTR GCA 90 bp | GAGAGAGCCTGCCTGATCCACCTCAGGATATGGGCGGGGGCTGGATGGTCTGAGTACCGGGCACCCTGGTaGTTCGCCAGCCATTCCTGC | + |
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Preference number: 4 (lower is better) Translates to: ERACLIHLRIWAGAGWSEYRAPW*FASHSC Trigger: GCAGGAATGGCTGGCGAAGCACCAGGGTGCCCGGTA...CTCAGACCATCCAGCCCCCGCCCATATCCTGAGGTGGATCAGGCAGGCTCTCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000295453.8 |
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| CDS-3UTR CCA 90 bp | CCTGAAATGCAGGCAGCTGCCAGGCACAAATCCCCAGTCCCTGGAGTTGGGGCCGGTGACAGCTCCAGGTaGAGGTCCGGCAGGACGACT | + |
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Preference number: 4 (lower is better) Translates to: PEMQAAARHKSPVPGVGAGDSSR*RSGRTT Trigger: AGTCGTCCTGCCGGACCTCCACCTGGAGCTGTCACC...GGCCCCAACTCCAGGGACTGGGGATTTGTGCCTGGCAGCTGCCTGCATTTCAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295453.8 |
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| CDS-3UTR GCA 90 bp | CCTGAAATGCAGGCAGCTGCCAGGCACAAATCCCCAGTCCCTGGAGTTGGGGCCCCAGAGCTTCCCAGGTaGTCCTCGGAACTCAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: PEMQAAARHKSPVPGVGAPELPR*SSELRW Trigger: CCACCTGAGTTCCGAGGAGCACCTGGGAAGCTCTGG...GGCCCCAACTCCAGGGACTGGGGATTTGTGCCTGGCAGCTGCCTGCATTTCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000295453.8 |
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| CDS-3UTR CCA 90 bp | CCTGAAATGCAGGCAGCTGCCAGGCACAAATCCCCAGTCCCTGGAGTTGGGGCCCGGGGCCATGGACTCTaGACTGCTATCCTGCACCCA | + |
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Preference number: 4 (lower is better) Translates to: PEMQAAARHKSPVPGVGARGHGL*TAILHP Trigger: TGGGTGCAGGATAGCAGTCCAGAGTCCATGGCCCCG...GGCCCCAACTCCAGGGACTGGGGATTTGTGCCTGGCAGCTGCCTGCATTTCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000295453.8 |
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| CDS-3UTR TCA 90 bp | GAGAGAGCCTGCCTGATCCACCTCAGGATATGGGCGGGGGCTGGATGGTCTGAGGGGGGCTGGATGGTCTaGGCCTCCTCTTTTCCTGAA | + |
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Preference number: 4 (lower is better) Translates to: ERACLIHLRIWAGAGWSEGGWMV*ASSFPE Trigger: TTCAGGAAAAGAGGAGGCTCAGACCATCCAGCCCCC...CTCAGACCATCCAGCCCCCGCCCATATCCTGAGGTGGATCAGGCAGGCTCTCTC 61% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000295453.8 |
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| CDS-3UTR CCA 90 bp | AAATGCAGGCAGCTGCCAGGCACAAATCCCCAGTCCCTGGAGTTGGGGCCAAAAGGGCCCCTGCATGTCTaGAAGCAGTCGGAGAGCGGC | + |
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Preference number: 4 (lower is better) Translates to: KCRQLPGTNPQSLELGPKGPLHV*KQSESG Trigger: GCCGCTCTCCGACTGCTTCCAGACATGCAGGGGCCC...TTTTGGCCCCAACTCCAGGGACTGGGGATTTGTGCCTGGCAGCTGCCTGCATTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000295453.8 |
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| CDS-3UTR CCA 90 bp | CCTGAAATGCAGGCAGCTGCCAGGCACAAATCCCCAGTCCCTGGAGTTGGGGCCAGGTGGGTGCTGGAATaGACCTTAGGGGGCGTCGAA | + |
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Preference number: 4 (lower is better) Translates to: PEMQAAARHKSPVPGVGARWVLE*TLGGVE Trigger: TTCGACGCCCCCTAAGGTCCATTCCAGCACCCACCT...GGCCCCAACTCCAGGGACTGGGGATTTGTGCCTGGCAGCTGCCTGCATTTCAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000295453.8 |
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| CDS-3UTR TCA 90 bp | AAATGCAGGCAGCTGCCAGGCACAAATCCCCAGTCCCTGGAGTTGGGGCCAAAAGGGGCGTCGAACATCTaGGTGGCTGTGACTTGGGGC | + |
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Preference number: 4 (lower is better) Translates to: KCRQLPGTNPQSLELGPKGASNI*VAVTWG Trigger: GCCCCAAGTCACAGCCACTCAGATGTTCGACGCCCC...TTTTGGCCCCAACTCCAGGGACTGGGGATTTGTGCCTGGCAGCTGCCTGCATTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENST00000295453.8 |
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| CDS-3UTR GCA 90 bp | AAATGCAGGCAGCTGCCAGGCACAAATCCCCAGTCCCTGGAGTTGGGGCCAAAACCTGCAGGAGCTCAGTaGGGTTCCACACGTACCGGG | + |
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Preference number: 4 (lower is better) Translates to: KCRQLPGTNPQSLELGPKPAGAQ*GSTRTG Trigger: CCCGGTACGTGTGGAACCGCACTGAGCTCCTGCAGG...TTTTGGCCCCAACTCCAGGGACTGGGGATTTGTGCCTGGCAGCTGCCTGCATTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000295453.8 |
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| CDS-3UTR CCA 90 bp | CCTGAAATGCAGGCAGCTGCCAGGCACAAATCCCCAGTCCCTGGAGTTGGGGCCATAAAGCAAAGGGCGTaGTGTCAAGGGCTCGGTCCC | + |
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Preference number: 4 (lower is better) Translates to: PEMQAAARHKSPVPGVGAIKQRA*CQGLGP Trigger: GGGACCGAGCCCTTGACACCACGCCCTTTGCTTTAT...GGCCCCAACTCCAGGGACTGGGGATTTGTGCCTGGCAGCTGCCTGCATTTCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295453.8 |
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| CDS-3UTR CCA 90 bp | CTCCTCGGAACTCAGGTGGGTGCTGGAATGGACCTTAGGGGGCGTCGAACATCTTGGGCGGGGGCTGGATaGTCTGAGCCTCCTCTTTTC | + |
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Preference number: 4 (lower is better) Translates to: LLGTQVGAGMDLRGRRTSWAGAG*SEPPLF Trigger: GAAAAGAGGAGGCTCAGACCATCCAGCCCCCGCCCA...AGATGTTCGACGCCCCCTAAGGTCCATTCCAGCACCCACCTGAGTTCCGAGGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000295453.8 |
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| CDS-3UTR GCA 90 bp | AAATGCAGGCAGCTGCCAGGCACAAATCCCCAGTCCCTGGAGTTGGGGCCAAAACCCGGGGAGAGAGCCTaGCTGATCCACCTCAGGATA | + |
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Preference number: 4 (lower is better) Translates to: KCRQLPGTNPQSLELGPKPGERA*LIHLRI Trigger: TATCCTGAGGTGGATCAGGCAGGCTCTCTCCCCGGG...TTTTGGCCCCAACTCCAGGGACTGGGGATTTGTGCCTGGCAGCTGCCTGCATTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000295453.8 |
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| CDS-3UTR GCA 90 bp | AAATGCAGGCAGCTGCCAGGCACAAATCCCCAGTCCCTGGAGTTGGGGCCAAAAGGTCCTAGGTATGGGTaGCTCATGTCCCCGGGGAGA | + |
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Preference number: 4 (lower is better) Translates to: KCRQLPGTNPQSLELGPKGPRYG*LMSPGR Trigger: TCTCCCCGGGGACATGAGGCACCCATACCTAGGACC...TTTTGGCCCCAACTCCAGGGACTGGGGATTTGTGCCTGGCAGCTGCCTGCATTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENST00000295453.8 |
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| CDS-3UTR CCA 90 bp | GAGAGAGCCTGCCTGATCCACCTCAGGATATGGGCGGGGGCTGGATGGTCTGAGGTAGAATTAGCCCAGTaGAGGGACAGCAGAGGACTG | + |
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Preference number: 4 (lower is better) Translates to: ERACLIHLRIWAGAGWSEVELAQ*RDSRGL Trigger: CAGTCCTCTGCTGTCCCTCCACTGGGCTAATTCTAC...CTCAGACCATCCAGCCCCCGCCCATATCCTGAGGTGGATCAGGCAGGCTCTCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000295453.8 |
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| CDS-3UTR TCA 90 bp | CTCCTCGGAACTCAGGTGGGTGCTGGAATGGACCTTAGGGGGCGTCGAACATCTAGCCTCCTCTTTTCCTaGAATGCAGGCAGCTGCCAG | + |
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Preference number: 4 (lower is better) Translates to: LLGTQVGAGMDLRGRRTSSLLFS*NAGSCQ Trigger: CTGGCAGCTGCCTGCATTTCAGGAAAAGAGGAGGCT...AGATGTTCGACGCCCCCTAAGGTCCATTCCAGCACCCACCTGAGTTCCGAGGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295453.8 |
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| CDS-3UTR CCA 90 bp | CTCCTCGGAACTCAGGTGGGTGCTGGAATGGACCTTAGGGGGCGTCGAACATCTTCCTCGGAACTCAGGTaGGTGCTGGAATGGACCTTA | + |
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Preference number: 4 (lower is better) Translates to: LLGTQVGAGMDLRGRRTSSSELR*VLEWTL Trigger: TAAGGTCCATTCCAGCACCCACCTGAGTTCCGAGGA...AGATGTTCGACGCCCCCTAAGGTCCATTCCAGCACCCACCTGAGTTCCGAGGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000295453.8 |
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| CDS-3UTR TCA 90 bp | AAATGCAGGCAGCTGCCAGGCACAAATCCCCAGTCCCTGGAGTTGGGGCCAAAAGGTTACCACTCCCACTaGCTTTCCTGCTTTCTTGGC | + |
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Preference number: 4 (lower is better) Translates to: KCRQLPGTNPQSLELGPKGYHSH*LSCFLG Trigger: GCCAAGAAAGCAGGAAAGTCAGTGGGAGTGGTAACC...TTTTGGCCCCAACTCCAGGGACTGGGGATTTGTGCCTGGCAGCTGCCTGCATTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000295453.8 |
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| CDS-3UTR CCA 90 bp | CTCCTCGGAACTCAGGTGGGTGCTGGAATGGACCTTAGGGGGCGTCGAACATCTCTACACTGTATGTCTTaGACAGAGCCACGTACGGGA | + |
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Preference number: 4 (lower is better) Translates to: LLGTQVGAGMDLRGRRTSLHCMS*TEPRTG Trigger: TCCCGTACGTGGCTCTGTCCAAGACATACAGTGTAG...AGATGTTCGACGCCCCCTAAGGTCCATTCCAGCACCCACCTGAGTTCCGAGGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000295453.8 |
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| CDS-3UTR CCA 90 bp | TCCTCTTTTCCTGAAATGCAGGCAGCTGCCAGGCACAAATCCCCAGTCCCTGGACCCAGTCCCTGGAGTTaGGGCCAAAATTTCAAGAGC | + |
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Preference number: 4 (lower is better) Translates to: SSFPEMQAAARHKSPVPGPSPWS*GQNFKS Trigger: GCTCTTGAAATTTTGGCCCCAACTCCAGGGACTGGG...TCCAGGGACTGGGGATTTGTGCCTGGCAGCTGCCTGCATTTCAGGAAAAGAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000295453.8 |
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| CDS-3UTR CAA 90 bp | GGGGAGAGAGCCTGCCTGATCCACCTCAGGATATGGGCGGGGGCTGGATGGTCTACCACAGCAGCCTCCTaGGCTGGGAGGGTGGGTTGC | + |
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Preference number: 5 (lower is better) Translates to: GERACLIHLRIWAGAGWSTTAAS*AGRVGC Trigger: GCAACCCACCCTCCCAGCCAAGGAGGCTGCTGTGGT...AGACCATCCAGCCCCCGCCCATATCCTGAGGTGGATCAGGCAGGCTCTCTCCCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295453.8 |
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| CDS-3UTR CAA 90 bp | GAGAGAGCCTGCCTGATCCACCTCAGGATATGGGCGGGGGCTGGATGGTCTGAGTCTACACTGTATGTCTaGGACAGAGCCACGTACGGG | + |
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Preference number: 5 (lower is better) Translates to: ERACLIHLRIWAGAGWSESTLYV*DRATYG Trigger: CCCGTACGTGGCTCTGTCCAAGACATACAGTGTAGA...CTCAGACCATCCAGCCCCCGCCCATATCCTGAGGTGGATCAGGCAGGCTCTCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000295453.8 |
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| CDS-3UTR CAA 90 bp | GGGGAGAGAGCCTGCCTGATCCACCTCAGGATATGGGCGGGGGCTGGATGGTCTGGTAATGAGTCTTCCTaGCTGAGAAATCCATGCCCA | + |
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Preference number: 5 (lower is better) Translates to: GERACLIHLRIWAGAGWSGNESS*LRNPCP Trigger: TGGGCATGGATTTCTCAGCAAGGAAGACTCATTACC...AGACCATCCAGCCCCCGCCCATATCCTGAGGTGGATCAGGCAGGCTCTCTCCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295453.8 |
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