RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ALOXE3 (Homo sapiens)

Ensembl gene IDs: ENSG00000179148

Ensembl transcript IDs: ENST00000318227.4, ENST00000380149.6, ENST00000448843.7, ENST00000583808.1

Found 541 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CGGAGGGGCTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTaGACGCTGCTGTGCTGGTCTCTCACAGCTCAGGGCCCAGTTTGT +
Preference number: 1 (lower is better)
Translates to: RRGYCALDFGQRLLT*TLLCWSLTAQGPVC
Trigger: ACAAACTGGGCCCTGAGCTGTGAGAGACCAGCACAGCAGCGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCCCCTCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
3UTR TCA 90 bp GGACGCTGCTGTGCTGGTCTCTCACAGCTCAGGGCCCAGTTTGTATaGTGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAG +
Preference number: 1 (lower is better)
Translates to: GRCCAGLSQLRAQFV*CQSHLGCKSLHVQK
Trigger: CTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACATCATACAAACTGGGCCCTGAGCTGTGAGAGACCAGCACAGCAGCGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
3UTR CCA 90 bp GCATTGGACTTTGGTCAGCGGCTTTTAACCTGGACGCTGCTGTGCTaGTCTCTCACAGCTCAGGGCCCAGTTTGTATGATGTCAGAGCCA +
Preference number: 1 (lower is better)
Translates to: ALDFGQRLLTWTLLC*SLTAQGPVCMMSEP
Trigger: TGGCTCTGACATCATACAAACTGGGCCCTGAGCTGTGAGAGACCAGCACAGCAGCGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
3UTR GCA 90 bp TGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGACGCTGCTGTaGTGGTCTCTCACAGCTCAGGGCCCAGTTTGTATGATGTCAGAG +
Preference number: 1 (lower is better)
Translates to: CALDFGQRLLTWTLL*WSLTAQGPVCMMSE
Trigger: CTCTGACATCATACAAACTGGGCCCTGAGCTGTGAGAGACCAGCACAGCAGCGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
3UTR CCA 90 bp TCTCTCACAGCTCAGGGCCCAGTTTGTATGATGTCAGAGCCATCTTaGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAGGTGAAC +
Preference number: 1 (lower is better)
Translates to: SLTAQGPVCMMSEPS*LQKSPCAEEKVQVN
Trigger: GTTCACCTGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACATCATACAAACTGGGCCCTGAGCTGTGAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
3UTR GCA 90 bp AGTTTGTATGATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTaGAGAAGAGAAGGTTCAGGTGAACTGAGAACAGGGAGGATGGAA +
Preference number: 1 (lower is better)
Translates to: SLYDVRAILAAKVSM*RREGSGELRTGRME
Trigger: TTCCATCCTCCCTGTTCTCAGTTCACCTGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACATCATACAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
3UTR-3UTR GCA 90 bp ACCCAAGCTGGGCATTCCAAGAGGCTGGAACAAGAGGCTGCCCCAAGTGGGGCATCGGAGGGGCTATTGTaGATTGGACTTTGGTCAGCG +
Preference number: 2 (lower is better)
Translates to: TQAGHSKRLEQEAAPSGASEGLL*IGLWSA
Trigger: CGCTGACCAAAGTCCAATGCACAATAGCCCCTCCGA...TGCCCCACTTGGGGCAGCCTCTTGTTCCAGCCTCTTGGAATGCCCAGCTTGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
3UTR-3UTR CCA 90 bp CAAGCTGGGCATTCCAAGAGGCTGGAACAAGAGGCTGCCCCAAGTGGGGCAAGACAGCGGCTTTTAACCTaGACGCTGCTGTGCTGGTCT +
Preference number: 2 (lower is better)
Translates to: QAGHSKRLEQEAAPSGARQRLLT*TLLCWS
Trigger: AGACCAGCACAGCAGCGTCCAGGTTAAAAGCCGCTG...TCTTGCCCCACTTGGGGCAGCCTCTTGTTCCAGCCTCTTGGAATGCCCAGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
3UTR-3UTR CCA 90 bp ACCCAAGCTGGGCATTCCAAGAGGCTGGAACAAGAGGCTGCCCCAAGTGGGGCAGGGGCTATTGTGCATTaGACTTTGGTCAGCGGCTTT +
Preference number: 2 (lower is better)
Translates to: TQAGHSKRLEQEAAPSGAGAIVH*TLVSGF
Trigger: AAAGCCGCTGACCAAAGTCCAATGCACAATAGCCCC...TGCCCCACTTGGGGCAGCCTCTTGTTCCAGCCTCTTGGAATGCCCAGCTTGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
3UTR-3UTR TCA 90 bp AAGCTGGGCATTCCAAGAGGCTGGAACAAGAGGCTGCCCCAAGTGGGGCAAGAAAGGGCCCAGTTTGTATaGTGTCAGAGCCATCTTGGC +
Preference number: 2 (lower is better)
Translates to: KLGIPRGWNKRLPQVGQERAQFV*CQSHLG
Trigger: GCCAAGATGGCTCTGACATCATACAAACTGGGCCCT...TTCTTGCCCCACTTGGGGCAGCCTCTTGTTCCAGCCTCTTGGAATGCCCAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
3UTR CAA 90 bp GCAAGAAGTGAAGCGGTTCCTTCCTTTCGGAGGGGCTATTGTGCATaGGACTTTGGTCAGCGGCTTTTAACCTGGACGCTGCTGTGCTGG +
Preference number: 2 (lower is better)
Translates to: ARSEAVPSFRRGYCA*DFGQRLLTWTLLCW
Trigger: CCAGCACAGCAGCGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCCCCTCCGAAAGGAAGGAACCGCTTCACTTCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
3UTR-3UTR CCA 90 bp GGGCTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGACGCTGCTGTGGAGGACCTGAGGAACTaGTCCTCCTCATGCTTGGAC +
Preference number: 2 (lower is better)
Translates to: GLLCIGLWSAAFNLDAAVEDLRN*SSSCLD
Trigger: GTCCAAGCATGAGGAGGACCAGTTCCTCAGGTCCTC...CACAGCAGCGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
3UTR-3UTR CCA 90 bp GGCTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGACGCTGCTGTGCGAGGACCTGAGGAACTaGTCCTCCTCATGCTTGGAC +
Preference number: 2 (lower is better)
Translates to: GYCALDFGQRLLTWTLLCEDLRN*SSSCLD
Trigger: GTCCAAGCATGAGGAGGACCAGTTCCTCAGGTCCTC...GCACAGCAGCGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
3UTR-3UTR TCA 90 bp TCAGGGCCCAGTTTGTATGATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGAGGGTCTGGAGGACCTaGGGAACTGGTCCTCCTCAT +
Preference number: 2 (lower is better)
Translates to: SGPSLYDVRAILAAKVSMRVWRT*GTGPPH
Trigger: ATGAGGAGGACCAGTTCCTCAGGTCCTCCAGACCCT...CATGGAGACTTTTGCAGCCAAGATGGCTCTGACATCATACAAACTGGGCCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
3UTR-3UTR TCA 90 bp TCCTTCCTTTCGGAGGGGCTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACAGGGTCTGGAGGACCTaGGGAACTGGTCCTCCTCAT +
Preference number: 2 (lower is better)
Translates to: SFLSEGLLCIGLWSAAFNRVWRT*GTGPPH
Trigger: ATGAGGAGGACCAGTTCCTCAGGTCCTCCAGACCCT...GTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCCCCTCCGAAAGGAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
3UTR-3UTR TCA 90 bp GGGCTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGACGCTGCTGTGAGGGCCCAGTTTGTATaGTGTCAGAGCCATCTTGGC +
Preference number: 2 (lower is better)
Translates to: GLLCIGLWSAAFNLDAAVRAQFV*CQSHLG
Trigger: GCCAAGATGGCTCTGACATCATACAAACTGGGCCCT...CACAGCAGCGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
3UTR-3UTR CCA 90 bp GAAACCCAAGCTGGGCATTCCAAGAGGCTGGAACAAGAGGCTGCCCCAAGTGGGTTGTGCATTGGACTTTaGTCAGCGGCTTTTAACCTG +
Preference number: 2 (lower is better)
Translates to: ETQAGHSKRLEQEAAPSGLCIGL*SAAFNL
Trigger: CAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAA...CCCACTTGGGGCAGCCTCTTGTTCCAGCCTCTTGGAATGCCCAGCTTGGGTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
3UTR-3UTR TCA 90 bp GATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAAGGGTCTGGAGGACCTaGGGAACTGGTCCTCCTCAT +
Preference number: 2 (lower is better)
Translates to: DVRAILAAKVSMCRREGSRVWRT*GTGPPH
Trigger: ATGAGGAGGACCAGTTCCTCAGGTCCTCCAGACCCT...TGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
3UTR-3UTR CCA 90 bp GATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAGAGGACCTGAGGAACTaGTCCTCCTCATGCTTGGAC +
Preference number: 2 (lower is better)
Translates to: DVRAILAAKVSMCRREGSEDLRN*SSSCLD
Trigger: GTCCAAGCATGAGGAGGACCAGTTCCTCAGGTCCTC...TGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
3UTR CAA 90 bp GTCTCTCACAGCTCAGGGCCCAGTTTGTATGATGTCAGAGCCATCTaGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAGGTGAA +
Preference number: 2 (lower is better)
Translates to: VSHSSGPSLYDVRAI*AAKVSMCRREGSGE
Trigger: TTCACCTGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACATCATACAAACTGGGCCCTGAGCTGTGAGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
3UTR-3UTR GCA 90 bp GGCTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGACGCTGCTGTGCAACTGGTCCTCCTCATaGTTGGACCTTTCTTTCTTC +
Preference number: 2 (lower is better)
Translates to: GYCALDFGQRLLTWTLLCNWSSS*LDLSFF
Trigger: GAAGAAAGAAAGGTCCAAGCATGAGGAGGACCAGTT...GCACAGCAGCGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
3UTR-3UTR GCA 90 bp GGCTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGACGCTGCTGTGCGCAAAAGTCTCCATGTaGAGAAGAGAAGGTTCAGGT +
Preference number: 2 (lower is better)
Translates to: GYCALDFGQRLLTWTLLCAKVSM*RREGSG
Trigger: ACCTGAACCTTCTCTTCTGCACATGGAGACTTTTGC...GCACAGCAGCGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
3UTR-3UTR GCA 90 bp TTTCGGAGGGGCTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGACGGCAAAAGTCTCCATGTaGAGAAGAGAAGGTTCAGGT +
Preference number: 2 (lower is better)
Translates to: FRRGYCALDFGQRLLTWTAKVSM*RREGSG
Trigger: ACCTGAACCTTCTCTTCTGCACATGGAGACTTTTGC...CGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCCCCTCCGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
3UTR-3UTR GCA 90 bp TCAGGGCCCAGTTTGTATGATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGAACTGGTCCTCCTCATaGTTGGACCTTTCTTTCTTC +
Preference number: 2 (lower is better)
Translates to: SGPSLYDVRAILAAKVSMNWSSS*LDLSFF
Trigger: GAAGAAAGAAAGGTCCAAGCATGAGGAGGACCAGTT...CATGGAGACTTTTGCAGCCAAGATGGCTCTGACATCATACAAACTGGGCCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
3UTR-3UTR GCA 90 bp GATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAAACTGGTCCTCCTCATaGTTGGACCTTTCTTTCTTC +
Preference number: 2 (lower is better)
Translates to: DVRAILAAKVSMCRREGSNWSSS*LDLSFF
Trigger: GAAGAAAGAAAGGTCCAAGCATGAGGAGGACCAGTT...TGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
3UTR-3UTR CAA 90 bp GAAACCCAAGCTGGGCATTCCAAGAGGCTGGAACAAGAGGCTGCCCCAAGTGGGAGGGGCTATTGTGCATaGGACTTTGGTCAGCGGCTT +
Preference number: 3 (lower is better)
Translates to: ETQAGHSKRLEQEAAPSGRGYCA*DFGQRL
Trigger: AAGCCGCTGACCAAAGTCCAATGCACAATAGCCCCT...CCCACTTGGGGCAGCCTCTTGTTCCAGCCTCTTGGAATGCCCAGCTTGGGTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
3UTR CCA 72 bp AAAGCTCAGAAACCCAAGCTGGGCATTCCAAGAGGCTaGAACAAGAGGCTGCCCCAAGTGGGGCAAGAAGTG +
Preference number: 3 (lower is better)
Translates to: KAQKPKLGIPRG*NKRLPQVGQEV
Trigger: CACTTCTTGCCCCACTTGGGGCAGCCTCTTGTTCCAGCCTCTTGGAATGCCCAGCTTGGGTTTCTGAGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
3UTR-3UTR CAA 90 bp AAGCTGGGCATTCCAAGAGGCTGGAACAAGAGGCTGCCCCAAGTGGGGCAAGAAGACCTTTCTTTCTTCTaGGGTGGTATTTGGGGGTGG +
Preference number: 3 (lower is better)
Translates to: KLGIPRGWNKRLPQVGQEDLSFF*GGIWGW
Trigger: CCACCCCCAAATACCACCCAAGAAGAAAGAAAGGTC...TTCTTGCCCCACTTGGGGCAGCCTCTTGTTCCAGCCTCTTGGAATGCCCAGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
3UTR-3UTR CAA 90 bp AAGCTGGGCATTCCAAGAGGCTGGAACAAGAGGCTGCCCCAAGTGGGGCAAGAAGATGTCAGAGCCATCTaGGCTGCAAAAGTCTCCATG +
Preference number: 3 (lower is better)
Translates to: KLGIPRGWNKRLPQVGQEDVRAI*AAKVSM
Trigger: CATGGAGACTTTTGCAGCCAAGATGGCTCTGACATC...TTCTTGCCCCACTTGGGGCAGCCTCTTGTTCCAGCCTCTTGGAATGCCCAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
3UTR-3UTR CAA 90 bp GGTGCTAGGGACAAAGGGGACCACATGTTAGACCCAGGCACACAGTCCTTCTGTAGCTCAGGGCCCAGTTaGTATGATGTCAGAGCCATC +
Preference number: 3 (lower is better)
Translates to: GARDKGDHMLDPGTQSFCSSGPS*YDVRAI
Trigger: GATGGCTCTGACATCATACAAACTGGGCCCTGAGCT...ACAGAAGGACTGTGTGCCTGGGTCTAACATGTGGTCCCCTTTGTCCCTAGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
3UTR-3UTR CAA 90 bp AAGCTGGGCATTCCAAGAGGCTGGAACAAGAGGCTGCCCCAAGTGGGGCAAGAACTTTCGGAGGGGCTATaGTGCATTGGACTTTGGTCA +
Preference number: 3 (lower is better)
Translates to: KLGIPRGWNKRLPQVGQELSEGL*CIGLWS
Trigger: TGACCAAAGTCCAATGCACAATAGCCCCTCCGAAAG...TTCTTGCCCCACTTGGGGCAGCCTCTTGTTCCAGCCTCTTGGAATGCCCAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
3UTR CCA 72 bp TATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTaGACGCTGCTGTGCTGGTCTCTCACAGCTCAGGGC +
Preference number: 3 (lower is better)
Translates to: YCALDFGQRLLT*TLLCWSLTAQG
Trigger: GCCCTGAGCTGTGAGAGACCAGCACAGCAGCGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
3UTR CCA 72 bp TCCTTCCTTTCGGAGGGGCTATTGTGCATTGGACTTTaGTCAGCGGCTTTTAACCTGGACGCTGCTGTGCTG +
Preference number: 3 (lower is better)
Translates to: SFLSEGLLCIGL*SAAFNLDAAVL
Trigger: CAGCACAGCAGCGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCCCCTCCGAAAGGAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
3UTR-3UTR CAA 90 bp TTTCGGAGGGGCTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGACGAGCTCAGGGCCCAGTTaGTATGATGTCAGAGCCATC +
Preference number: 3 (lower is better)
Translates to: FRRGYCALDFGQRLLTWTSSGPS*YDVRAI
Trigger: GATGGCTCTGACATCATACAAACTGGGCCCTGAGCT...CGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCCCCTCCGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
3UTR-3UTR CAA 90 bp CTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGACGCTGCTGTGCTGTGGTCCTCCTCATGCTaGGACCTTTCTTTCTTCTTG +
Preference number: 3 (lower is better)
Translates to: LLCIGLWSAAFNLDAAVLWSSSC*DLSFFL
Trigger: CAAGAAGAAAGAAAGGTCCAAGCATGAGGAGGACCA...CAGCACAGCAGCGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
3UTR-3UTR CAA 90 bp TTTCGGAGGGGCTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGACGTGGTCCTCCTCATGCTaGGACCTTTCTTTCTTCTTG +
Preference number: 3 (lower is better)
Translates to: FRRGYCALDFGQRLLTWTWSSSC*DLSFFL
Trigger: CAAGAAGAAAGAAAGGTCCAAGCATGAGGAGGACCA...CGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCCCCTCCGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
3UTR GCA 72 bp GATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTaGAGAAGAGAAGGTTCAGGTGAACTGAGAACAGGG +
Preference number: 3 (lower is better)
Translates to: DVRAILAAKVSM*RREGSGELRTG
Trigger: CCCTGTTCTCAGTTCACCTGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
3UTR CCA 72 bp GCTCAGGGCCCAGTTTGTATGATGTCAGAGCCATCTTaGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTT +
Preference number: 3 (lower is better)
Translates to: AQGPVCMMSEPS*LQKSPCAEEKV
Trigger: AACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACATCATACAAACTGGGCCCTGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
3UTR-3UTR CAA 90 bp ATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAGGACCTTTCTTTCTTCTaGGGTGGTATTTGGGGGTGG +
Preference number: 3 (lower is better)
Translates to: MSEPSWLQKSPCAEEKVQDLSFF*GGIWGW
Trigger: CCACCCCCAAATACCACCCAAGAAGAAAGAAAGGTC...CTGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
3UTR-3UTR CAA 90 bp ATGATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTGACCTTTCTTTCTTCTaGGGTGGTATTTGGGGGTGG +
Preference number: 3 (lower is better)
Translates to: MMSEPSWLQKSPCAEEKVDLSFF*GGIWGW
Trigger: CCACCCCCAAATACCACCCAAGAAGAAAGAAAGGTC...AACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACATCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
3UTR TCA 72 bp TGGGATGAAAGGGAGTGGGATGAAAGGGGAGTTGGATaGAATCTTTGGAGAAAGACAGATCTCCACAAACAC +
Preference number: 3 (lower is better)
Translates to: WDEREWDERGVG*NLWRKTDLHKH
Trigger: GTGTTTGTGGAGATCTGTCTTTCTCCAAAGATTTCATCCAACTCCCCTTTCATCCCACTCCCTTTCATCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp ACCCAAGCTGGGCATTCCAAGAGGCTGGAACAAGAGGCTGCCCCAAGTGGGGCAATGCCCCGGCAACGCTaGCCGCAGCAGCAGCCGGCC +
Preference number: 4 (lower is better)
Translates to: TQAGHSKRLEQEAAPSGAMPRQR*PQQQPA
Trigger: GGCCGGCTGCTGCTGCGGCCAGCGTTGCCGGGGCAT...TGCCCCACTTGGGGCAGCCTCTTGTTCCAGCCTCTTGGAATGCCCAGCTTGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp ACCCAAGCTGGGCATTCCAAGAGGCTGGAACAAGAGGCTGCCCCAAGTGGGGCAGGCACCAGCGCCCCCTaGGGGCTGAGCCACAGCAGG +
Preference number: 4 (lower is better)
Translates to: TQAGHSKRLEQEAAPSGAGTSAP*GLSHSR
Trigger: CCTGCTGTGGCTCAGCCCCCAGGGGGCGCTGGTGCC...TGCCCCACTTGGGGCAGCCTCTTGTTCCAGCCTCTTGGAATGCCCAGCTTGGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp ACCCAAGCTGGGCATTCCAAGAGGCTGGAACAAGAGGCTGCCCCAAGTGGGGCATCTGGAAGGCGGCGATaGTCCGCCTCGGGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: TQAGHSKRLEQEAAPSGASGRRR*SASGPP
Trigger: AGGAGGCCCCGAGGCGGAGCATCGCCGCCTTCCAGA...TGCCCCACTTGGGGCAGCCTCTTGTTCCAGCCTCTTGGAATGCCCAGCTTGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp CAAGCTGGGCATTCCAAGAGGCTGGAACAAGAGGCTGCCCCAAGTGGGGCAAGACTCTCCGAAGCTCCCTaGTGGCGGCTCGGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: QAGHSKRLEQEAAPSGARLSEAP*WRLGLP
Trigger: AGGAAGCCCGAGCCGCCAGCAGGGAGCTTCGGAGAG...TCTTGCCCCACTTGGGGCAGCCTCTTGTTCCAGCCTCTTGGAATGCCCAGCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp GGGCTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGACGCTGCTGTGATGCCCCGGCAACGCTaGCCGCAGCAGCAGCCGGCC +
Preference number: 4 (lower is better)
Translates to: GLLCIGLWSAAFNLDAAVMPRQR*PQQQPA
Trigger: GGCCGGCTGCTGCTGCGGCCAGCGTTGCCGGGGCAT...CACAGCAGCGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp GGTGCTAGGGACAAAGGGGACCACATGTTAGACCCAGGCACACAGTCCTTCTGTCGGCCGTTTAGGCAGTaGGTGGGGGCCTCCGCCAGG +
Preference number: 4 (lower is better)
Translates to: GARDKGDHMLDPGTQSFCRPFRQ*VGASAR
Trigger: CCTGGCGGAGGCCCCCACCCACTGCCTAAACGGCCG...ACAGAAGGACTGTGTGCCTGGGTCTAACATGTGGTCCCCTTTGTCCCTAGCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp CAAGCTGGGCATTCCAAGAGGCTGGAACAAGAGGCTGCCCCAAGTGGGGCAAGAGGGGTCTGGCTGAGCTaGATGGCCAAGGGCACCAGC +
Preference number: 4 (lower is better)
Translates to: QAGHSKRLEQEAAPSGARGVWLS*MAKGTS
Trigger: GCTGGTGCCCTTGGCCATCCAGCTCAGCCAGACCCC...TCTTGCCCCACTTGGGGCAGCCTCTTGTTCCAGCCTCTTGGAATGCCCAGCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR TCA 90 bp GGGCTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGACGCTGCTGTGGCCCGGGGGTCTGGCTaGGCTGGATGGCCAAGGGCA +
Preference number: 4 (lower is better)
Translates to: GLLCIGLWSAAFNLDAAVARGSG*AGWPRA
Trigger: TGCCCTTGGCCATCCAGCTCAGCCAGACCCCCGGGC...CACAGCAGCGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR TCA 90 bp TTTCGGAGGGGCTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGACGCGAGGCCCTCGGGGTTaGGCAGCGTGGCCCTCGCGA +
Preference number: 4 (lower is better)
Translates to: FRRGYCALDFGQRLLTWTRGPRG*AAWPSR
Trigger: TCGCGAGGGCCACGCTGCTCAACCCCGAGGGCCTCG...CGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCCCCTCCGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR TCA 90 bp TCCTTTCGGAGGGGCTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGCGAGGCCCTCGGGGTTaGGCAGCGTGGCCCTCGCGA +
Preference number: 4 (lower is better)
Translates to: SFRRGYCALDFGQRLLTWRGPRG*AAWPSR
Trigger: TCGCGAGGGCCACGCTGCTCAACCCCGAGGGCCTCG...CCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCCCCTCCGAAAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp ACCCAAGCTGGGCATTCCAAGAGGCTGGAACAAGAGGCTGCCCCAAGTGGGGCAGCCGGTCCCTCTGGCTaGCTCACCCAGATGGATATC +
Preference number: 4 (lower is better)
Translates to: TQAGHSKRLEQEAAPSGAAGPSG*LTQMDI
Trigger: GATATCCATCTGGGTGAGCCAGCCAGAGGGACCGGC...TGCCCCACTTGGGGCAGCCTCTTGTTCCAGCCTCTTGGAATGCCCAGCTTGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp GGGCTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGACGCTGCTGTGCGGCCGTTTAGGCAGTaGGTGGGGGCCTCCGCCAGG +
Preference number: 4 (lower is better)
Translates to: GLLCIGLWSAAFNLDAAVRPFRQ*VGASAR
Trigger: CCTGGCGGAGGCCCCCACCCACTGCCTAAACGGCCG...CACAGCAGCGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp CTCACAGCTCAGGGCCCAGTTTGTATGATGTCAGAGCCATCTTGGCTGCAAAAGGGCACCAGCGCCCCCTaGGGGCTGAGCCACAGCAGG +
Preference number: 4 (lower is better)
Translates to: LTAQGPVCMMSEPSWLQKGTSAP*GLSHSR
Trigger: CCTGCTGTGGCTCAGCCCCCAGGGGGCGCTGGTGCC...CTTTTGCAGCCAAGATGGCTCTGACATCATACAAACTGGGCCCTGAGCTGTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp GGCTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGACGCTGCTGTGCTGGCAGAGCGGCAGCTaGCGCAGCGTGGCCATGGCG +
Preference number: 4 (lower is better)
Translates to: GYCALDFGQRLLTWTLLCWQSGS*RSVAMA
Trigger: CGCCATGGCCACGCTGCGCCAGCTGCCGCTCTGCCA...GCACAGCAGCGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp GTCTCTCACAGCTCAGGGCCCAGTTTGTATGATGTCAGAGCCATCTTGGCTGCAGGAAGGAGGAAGGGATaGCCCGGCAACGCTGGCCGC +
Preference number: 4 (lower is better)
Translates to: VSHSSGPSLYDVRAILAAGRRKG*PGNAGR
Trigger: GCGGCCAGCGTTGCCGGGGCATCCCTTCCTCCTTCC...TGCAGCCAAGATGGCTCTGACATCATACAAACTGGGCCCTGAGCTGTGAGAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp GGCTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGACGCTGCTGTGCGGGGCGGCCACGTACTaGTGGCGGCCGTTTAGGCAG +
Preference number: 4 (lower is better)
Translates to: GYCALDFGQRLLTWTLLCGAATY*WRPFRQ
Trigger: CTGCCTAAACGGCCGCCAGCAGTACGTGGCCGCCCC...GCACAGCAGCGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp ACCCAAGCTGGGCATTCCAAGAGGCTGGAACAAGAGGCTGCCCCAAGTGGGGCAGCCCCAAAGTCATGCTaGCCACTGTTGACAGCAGCG +
Preference number: 4 (lower is better)
Translates to: TQAGHSKRLEQEAAPSGAAPKSC*PLLTAA
Trigger: CGCTGCTGTCAACAGTGGGCAGCATGACTTTGGGGC...TGCCCCACTTGGGGCAGCCTCTTGTTCCAGCCTCTTGGAATGCCCAGCTTGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp GGCTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGACGCTGCTGTGCTCTGGAAGGCGGCGATaGTCCGCCTCGGGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: GYCALDFGQRLLTWTLLCSGRRR*SASGPP
Trigger: AGGAGGCCCCGAGGCGGAGCATCGCCGCCTTCCAGA...GCACAGCAGCGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp TTTCGGAGGGGCTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGACGGGGCCTGCAGGATCCTaGGCGGGAGCCCAGGTGTCC +
Preference number: 4 (lower is better)
Translates to: FRRGYCALDFGQRLLTWTGPAGS*AGAQVS
Trigger: GGACACCTGGGCTCCCGCCCAGGATCCTGCAGGCCC...CGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCCCCTCCGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000318227.4
CDS-3UTR CCA 90 bp TCTCACAGCTCAGGGCCCAGTTTGTATGATGTCAGAGCCATCTTGGCTGCAAAAATGCCCCGGCAACGCTaGCCGCAGCAGCAGCCGGCC +
Preference number: 4 (lower is better)
Translates to: SHSSGPSLYDVRAILAAKMPRQR*PQQQPA
Trigger: GGCCGGCTGCTGCTGCGGCCAGCGTTGCCGGGGCAT...TTTTGCAGCCAAGATGGCTCTGACATCATACAAACTGGGCCCTGAGCTGTGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp AGTGAAGCGGTTCCTTCCTTTCGGAGGGGCTATTGTGCATTGGACTTTGGTCAGCGGCCGTTTAGGCAGTaGGTGGGGGCCTCCGCCAGG +
Preference number: 4 (lower is better)
Translates to: SEAVPSFRRGYCALDFGQRPFRQ*VGASAR
Trigger: CCTGGCGGAGGCCCCCACCCACTGCCTAAACGGCCG...CTGACCAAAGTCCAATGCACAATAGCCCCTCCGAAAGGAAGGAACCGCTTCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp GGTGCTAGGGACAAAGGGGACCACATGTTAGACCCAGGCACACAGTCCTTCTGTCCACAGCAGGCACAGTaGGGCGGCCACGTACTGCTG +
Preference number: 4 (lower is better)
Translates to: GARDKGDHMLDPGTQSFCPQQAQ*GGHVLL
Trigger: CAGCAGTACGTGGCCGCCCCACTGTGCCTGCTGTGG...ACAGAAGGACTGTGTGCCTGGGTCTAACATGTGGTCCCCTTTGTCCCTAGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp GGCTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGACGCTGCTGTGCGGCGCAGCGTGGCCATaGCGAAGGCCTCGCACAGCA +
Preference number: 4 (lower is better)
Translates to: GYCALDFGQRLLTWTLLCGAAWP*RRPRTA
Trigger: TGCTGTGCGAGGCCTTCGCCATGGCCACGCTGCGCC...GCACAGCAGCGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp TCCTTTCGGAGGGGCTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGGCAGCTGGCGCAGCGTaGCCATGGCGAAGGCCTCGC +
Preference number: 4 (lower is better)
Translates to: SFRRGYCALDFGQRLLTWAAGAA*PWRRPR
Trigger: GCGAGGCCTTCGCCATGGCCACGCTGCGCCAGCTGC...CCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCCCCTCCGAAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp GGGCTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGACGCTGCTGTGCCGATGGACGTGACCTaGTCCACGAGGCCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: GLLCIGLWSAAFNLDAAVPMDVT*STRPSG
Trigger: CCCCGAGGGCCTCGTGGACCAGGTCACGTCCATCGG...CACAGCAGCGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp CAAGCTGGGCATTCCAAGAGGCTGGAACAAGAGGCTGCCCCAAGTGGGGCAAGACTTCACCATCTCTCCTaGGGTGCACAGCCGGCTTGG +
Preference number: 4 (lower is better)
Translates to: QAGHSKRLEQEAAPSGARLHHLS*GAQPAW
Trigger: CCAAGCCGGCTGTGCACCCCAGGAGAGATGGTGAAG...TCTTGCCCCACTTGGGGCAGCCTCTTGTTCCAGCCTCTTGGAATGCCCAGCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR TCA 90 bp ACCCAAGCTGGGCATTCCAAGAGGCTGGAACAAGAGGCTGCCCCAAGTGGGGCAACGCAGGGATGGCATTaGAGAGCAGCGAGATCGTCT +
Preference number: 4 (lower is better)
Translates to: TQAGHSKRLEQEAAPSGATQGWH*RAARSS
Trigger: AGACGATCTCGCTGCTCTTCAATGCCATCCCTGCGT...TGCCCCACTTGGGGCAGCCTCTTGTTCCAGCCTCTTGGAATGCCCAGCTTGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR TCA 90 bp TCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAGGTGGCCCGGGGGTCTGGCTaGGCTGGATGGCCAAGGGCA +
Preference number: 4 (lower is better)
Translates to: SEPSWLQKSPCAEEKVQVARGSG*AGWPRA
Trigger: TGCCCTTGGCCATCCAGCTCAGCCAGACCCCCGGGC...CACCTGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR TCA 90 bp GAAACCCAAGCTGGGCATTCCAAGAGGCTGGAACAAGAGGCTGCCCCAAGTGGGAGAAATTGGTGTAGGTaGAGTGGGCCAGGCCCGTGC +
Preference number: 4 (lower is better)
Translates to: ETQAGHSKRLEQEAAPSGRNWCR*SGPGPC
Trigger: GCACGGGCCTGGCCCACTTCACCTACACCAATTTCT...CCCACTTGGGGCAGCCTCTTGTTCCAGCCTCTTGGAATGCCCAGCTTGGGTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR TCA 90 bp GAAACCCAAGCTGGGCATTCCAAGAGGCTGGAACAAGAGGCTGCCCCAAGTGGGGGGCTGCCTCATGGATaGTGGAGCATTGGGCATCCA +
Preference number: 4 (lower is better)
Translates to: ETQAGHSKRLEQEAAPSGGLPHG*WSIGHP
Trigger: TGGATGCCCAATGCTCCATCATCCATGAGGCAGCCC...CCCACTTGGGGCAGCCTCTTGTTCCAGCCTCTTGGAATGCCCAGCTTGGGTTTC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp CAAGCTGGGCATTCCAAGAGGCTGGAACAAGAGGCTGCCCCAAGTGGGGCAAGAAGATGTTGTCCAGTGTaGCGGCCCTCAGGTAGGGAC +
Preference number: 4 (lower is better)
Translates to: QAGHSKRLEQEAAPSGARRCCPV*RPSGRD
Trigger: GTCCCTACCTGAGGGCCGGCACACTGGACAACATCT...TCTTGCCCCACTTGGGGCAGCCTCTTGTTCCAGCCTCTTGGAATGCCCAGCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp GAAACCCAAGCTGGGCATTCCAAGAGGCTGGAACAAGAGGCTGCCCCAAGTGGGCCAGGAACTCAGAGTTaGGCACCCACGTCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: ETQAGHSKRLEQEAAPSGPGTQS*APTSWP
Trigger: TGGCCAAGACGTGGGTGCGCAACTCTGAGTTCCTGG...CCCACTTGGGGCAGCCTCTTGTTCCAGCCTCTTGGAATGCCCAGCTTGGGTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp ACCCAAGCTGGGCATTCCAAGAGGCTGGAACAAGAGGCTGCCCCAAGTGGGGCAGCCTCGCACAGCAAATaGGTGCACAGAAAGTGCGTG +
Preference number: 4 (lower is better)
Translates to: TQAGHSKRLEQEAAPSGAASHSK*VHRKCV
Trigger: CACGCACTTTCTGTGCACGCATTTGCTGTGCGAGGC...TGCCCCACTTGGGGCAGCCTCTTGTTCCAGCCTCTTGGAATGCCCAGCTTGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp ACCCAAGCTGGGCATTCCAAGAGGCTGGAACAAGAGGCTGCCCCAAGTGGGGCATGCAGCTCCGAATCCTaGTGCACAGATGCGTCACTG +
Preference number: 4 (lower is better)
Translates to: TQAGHSKRLEQEAAPSGACSSES*CTDASL
Trigger: CAGTGACGCATCTGTGCAGCAGGATTCGGAGCTGCA...TGCCCCACTTGGGGCAGCCTCTTGTTCCAGCCTCTTGGAATGCCCAGCTTGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp CTCACAGCTCAGGGCCCAGTTTGTATGATGTCAGAGCCATCTTGGCTGCAAAAGTCTGGAAGGCGGCGATaGTCCGCCTCGGGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: LTAQGPVCMMSEPSWLQKSGRRR*SASGPP
Trigger: AGGAGGCCCCGAGGCGGAGCATCGCCGCCTTCCAGA...CTTTTGCAGCCAAGATGGCTCTGACATCATACAAACTGGGCCCTGAGCTGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp AAGCTGGGCATTCCAAGAGGCTGGAACAAGAGGCTGCCCCAAGTGGGGCAAGAAGGGGTCCAGGCAAGCTaGCCTCCAATTCTTCCCCTC +
Preference number: 4 (lower is better)
Translates to: KLGIPRGWNKRLPQVGQEGVQAS*PPILPL
Trigger: GAGGGGAAGAATTGGAGGGCAGCTTGCCTGGACCCC...TTCTTGCCCCACTTGGGGCAGCCTCTTGTTCCAGCCTCTTGGAATGCCCAGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp GGGCTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGACGCTGCTGTGTCCGAAGCTCCCTGCTaGCGGCTCGGGCTTCCTCTC +
Preference number: 4 (lower is better)
Translates to: GLLCIGLWSAAFNLDAAVSEAPC*RLGLPL
Trigger: GAGAGGAAGCCCGAGCCGCCAGCAGGGAGCTTCGGA...CACAGCAGCGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp GAAACCCAAGCTGGGCATTCCAAGAGGCTGGAACAAGAGGCTGCCCCAAGTGGGGATCTAGCCGCTGCTTaGGGCTTTCACCACACGTGC +
Preference number: 4 (lower is better)
Translates to: ETQAGHSKRLEQEAAPSGDLAAA*GFHHTC
Trigger: GCACGTGTGGTGAAAGCCCCAAGCAGCGGCTAGATC...CCCACTTGGGGCAGCCTCTTGTTCCAGCCTCTTGGAATGCCCAGCTTGGGTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp GGCTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGACGCTGCTGTGCGCGGCCACGTACTGCTaGCGGCCGTTTAGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: GYCALDFGQRLLTWTLLCAATYC*RPFRQW
Trigger: CCACTGCCTAAACGGCCGCCAGCAGTACGTGGCCGC...GCACAGCAGCGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp GTCTCTCACAGCTCAGGGCCCAGTTTGTATGATGTCAGAGCCATCTTGGCTGCAGCGGCCACGTACTGCTaGCGGCCGTTTAGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: VSHSSGPSLYDVRAILAAAATYC*RPFRQW
Trigger: CCACTGCCTAAACGGCCGCCAGCAGTACGTGGCCGC...TGCAGCCAAGATGGCTCTGACATCATACAAACTGGGCCCTGAGCTGTGAGAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp ATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAGGGCACCAGCGCCCCCTaGGGGCTGAGCCACAGCAGG +
Preference number: 4 (lower is better)
Translates to: MSEPSWLQKSPCAEEKVQGTSAP*GLSHSR
Trigger: CCTGCTGTGGCTCAGCCCCCAGGGGGCGCTGGTGCC...CTGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp GGCTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGACGCTGCTGTGCGGGGTCTGGCTGAGCTaGATGGCCAAGGGCACCAGC +
Preference number: 4 (lower is better)
Translates to: GYCALDFGQRLLTWTLLCGVWLS*MAKGTS
Trigger: GCTGGTGCCCTTGGCCATCCAGCTCAGCCAGACCCC...GCACAGCAGCGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp CTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGACGCTGCTGTGCTGGGCGCAGCGTGGCCATaGCGAAGGCCTCGCACAGCA +
Preference number: 4 (lower is better)
Translates to: LLCIGLWSAAFNLDAAVLGAAWP*RRPRTA
Trigger: TGCTGTGCGAGGCCTTCGCCATGGCCACGCTGCGCC...CAGCACAGCAGCGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp TCTCACAGCTCAGGGCCCAGTTTGTATGATGTCAGAGCCATCTTGGCTGCAAAATGGCAGAGCGGCAGCTaGCGCAGCGTGGCCATGGCG +
Preference number: 4 (lower is better)
Translates to: SHSSGPSLYDVRAILAAKWQSGS*RSVAMA
Trigger: CGCCATGGCCACGCTGCGCCAGCTGCCGCTCTGCCA...TTTTGCAGCCAAGATGGCTCTGACATCATACAAACTGGGCCCTGAGCTGTGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp GGTGCTAGGGACAAAGGGGACCACATGTTAGACCCAGGCACACAGTCCTTCTGTGCGTGGCCCTCGCGATaGTGTTCACCTGCAGCGTGT +
Preference number: 4 (lower is better)
Translates to: GARDKGDHMLDPGTQSFCAWPSR*CSPAAC
Trigger: ACACGCTGCAGGTGAACACCATCGCGAGGGCCACGC...ACAGAAGGACTGTGTGCCTGGGTCTAACATGTGGTCCCCTTTGTCCCTAGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp CTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGACGCTGCTGTGCTGCCGATGGACGTGACCTaGTCCACGAGGCCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: LLCIGLWSAAFNLDAAVLPMDVT*STRPSG
Trigger: CCCCGAGGGCCTCGTGGACCAGGTCACGTCCATCGG...CAGCACAGCAGCGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp CAAGCTGGGCATTCCAAGAGGCTGGAACAAGAGGCTGCCCCAAGTGGGGCAAGAAAGTCTTCAGGGTGGTaGTCCCCTTGGTCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: QAGHSKRLEQEAAPSGARKSSGW*SPWSGV
Trigger: CACCCCAGACCAAGGGGACCACCACCCTGAAGACTT...TCTTGCCCCACTTGGGGCAGCCTCTTGTTCCAGCCTCTTGGAATGCCCAGCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp ACCCAAGCTGGGCATTCCAAGAGGCTGGAACAAGAGGCTGCCCCAAGTGGGGCAGAGGACCTGAGGAACTaGTCCTCCTCATGCTTGGAC +
Preference number: 4 (lower is better)
Translates to: TQAGHSKRLEQEAAPSGAEDLRN*SSSCLD
Trigger: GTCCAAGCATGAGGAGGACCAGTTCCTCAGGTCCTC...TGCCCCACTTGGGGCAGCCTCTTGTTCCAGCCTCTTGGAATGCCCAGCTTGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp GTCTCTCACAGCTCAGGGCCCAGTTTGTATGATGTCAGAGCCATCTTGGCTGCAACACTGCCCTCCGCCTaGTCAGCGGCCCGGACTGAT +
Preference number: 4 (lower is better)
Translates to: VSHSSGPSLYDVRAILAATLPSA*SAARTD
Trigger: ATCAGTCCGGGCCGCTGACCAGGCGGAGGGCAGTGT...TGCAGCCAAGATGGCTCTGACATCATACAAACTGGGCCCTGAGCTGTGAGAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380149.6
CDS-3UTR TCA 90 bp CAAGCTGGGCATTCCAAGAGGCTGGAACAAGAGGCTGCCCCAAGTGGGGCAAGAACGTGCCCACCAGTGTaGCAGAGATGTTGTCCAGTG +
Preference number: 4 (lower is better)
Translates to: QAGHSKRLEQEAAPSGARTCPPV*QRCCPV
Trigger: CACTGGACAACATCTCTGTCACACTGGTGGGCACGT...TCTTGCCCCACTTGGGGCAGCCTCTTGTTCCAGCCTCTTGGAATGCCCAGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR TCA 90 bp GAAACCCAAGCTGGGCATTCCAAGAGGCTGGAACAAGAGGCTGCCCCAAGTGGGACGCAGGGATGGCATTaGAGAGCAGCGAGATCGTCT +
Preference number: 4 (lower is better)
Translates to: ETQAGHSKRLEQEAAPSGTQGWH*RAARSS
Trigger: AGACGATCTCGCTGCTCTTCAATGCCATCCCTGCGT...CCCACTTGGGGCAGCCTCTTGTTCCAGCCTCTTGGAATGCCCAGCTTGGGTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR TCA 90 bp TATGATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTCGAGGCCCTCGGGGTTaGGCAGCGTGGCCCTCGCGA +
Preference number: 4 (lower is better)
Translates to: YDVRAILAAKVSMCRREGRGPRG*AAWPSR
Trigger: TCGCGAGGGCCACGCTGCTCAACCCCGAGGGCCTCG...ACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACATCATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR TCA 90 bp GGGCTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGACGCTGCTGTGCCGGCTTGGGAAACCTaGGCTTTCCCGGCCCAGGAA +
Preference number: 4 (lower is better)
Translates to: GLLCIGLWSAAFNLDAAVPAWET*AFPAQE
Trigger: TTCCTGGGCCGGGAAAGCTCAGGTTTCCCAAGCCGG...CACAGCAGCGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR TCA 90 bp GGCTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGACGCTGCTGTGCCCGGCTTGGGAAACCTaGGCTTTCCCGGCCCAGGAA +
Preference number: 4 (lower is better)
Translates to: GYCALDFGQRLLTWTLLCPAWET*AFPAQE
Trigger: TTCCTGGGCCGGGAAAGCTCAGGTTTCCCAAGCCGG...GCACAGCAGCGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp TCTCACAGCTCAGGGCCCAGTTTGTATGATGTCAGAGCCATCTTGGCTGCAAAAGGAAGGAGGAAGGGATaGCCCGGCAACGCTGGCCGC +
Preference number: 4 (lower is better)
Translates to: SHSSGPSLYDVRAILAAKGRRKG*PGNAGR
Trigger: GCGGCCAGCGTTGCCGGGGCATCCCTTCCTCCTTCC...TTTTGCAGCCAAGATGGCTCTGACATCATACAAACTGGGCCCTGAGCTGTGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp ACCCAAGCTGGGCATTCCAAGAGGCTGGAACAAGAGGCTGCCCCAAGTGGGGCAACACAGGCGGTACACTaGCATGATGGGAAGGAGGAA +
Preference number: 4 (lower is better)
Translates to: TQAGHSKRLEQEAAPSGATQAVH*HDGKEE
Trigger: TTCCTCCTTCCCATCATGGCAGTGTACCGCCTGTGT...TGCCCCACTTGGGGCAGCCTCTTGTTCCAGCCTCTTGGAATGCCCAGCTTGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp TCAGGGCCCAGTTTGTATGATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGGGGGCGGCCACGTACTaGTGGCGGCCGTTTAGGCAG +
Preference number: 4 (lower is better)
Translates to: SGPSLYDVRAILAAKVSMGAATY*WRPFRQ
Trigger: CTGCCTAAACGGCCGCCAGCAGTACGTGGCCGCCCC...CATGGAGACTTTTGCAGCCAAGATGGCTCTGACATCATACAAACTGGGCCCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp AAGCTGGGCATTCCAAGAGGCTGGAACAAGAGGCTGCCCCAAGTGGGGCAAGAAACCTGGACGCTGCTGTaGTGGTCTCTCACAGCTCAG +
Preference number: 4 (lower is better)
Translates to: KLGIPRGWNKRLPQVGQETWTLL*WSLTAQ
Trigger: CTGAGCTGTGAGAGACCAGCACAGCAGCGTCCAGGT...TTCTTGCCCCACTTGGGGCAGCCTCTTGTTCCAGCCTCTTGGAATGCCCAGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp GGTGCTAGGGACAAAGGGGACCACATGTTAGACCCAGGCACACAGTCCTTCTGTGCCGGTCCCTCTGGCTaGCTCACCCAGATGGATATC +
Preference number: 4 (lower is better)
Translates to: GARDKGDHMLDPGTQSFCAGPSG*LTQMDI
Trigger: GATATCCATCTGGGTGAGCCAGCCAGAGGGACCGGC...ACAGAAGGACTGTGTGCCTGGGTCTAACATGTGGTCCCCTTTGTCCCTAGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp GGCTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGACGCTGCTGTGCCACAGCCGGTCCCTCTaGCTGGCTCACCCAGATGGA +
Preference number: 4 (lower is better)
Translates to: GYCALDFGQRLLTWTLLCHSRSL*LAHPDG
Trigger: TCCATCTGGGTGAGCCAGCCAGAGGGACCGGCTGTG...GCACAGCAGCGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp AAGCTGGGCATTCCAAGAGGCTGGAACAAGAGGCTGCCCCAAGTGGGGCAAGAAGGGCCCAGCTCTCTCTaGGATGTTCCTGGGCTTTCT +
Preference number: 4 (lower is better)
Translates to: KLGIPRGWNKRLPQVGQEGPSSL*DVPGLS
Trigger: AGAAAGCCCAGGAACATCCCAGAGAGAGCTGGGCCC...TTCTTGCCCCACTTGGGGCAGCCTCTTGTTCCAGCCTCTTGGAATGCCCAGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp CTCACAGCTCAGGGCCCAGTTTGTATGATGTCAGAGCCATCTTGGCTGCAAAAGCCACAGCAGGCACAGTaGGGCGGCCACGTACTGCTG +
Preference number: 4 (lower is better)
Translates to: LTAQGPVCMMSEPSWLQKPQQAQ*GGHVLL
Trigger: CAGCAGTACGTGGCCGCCCCACTGTGCCTGCTGTGG...CTTTTGCAGCCAAGATGGCTCTGACATCATACAAACTGGGCCCTGAGCTGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp GATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAGCAGCTGGCGCAGCGTaGCCATGGCGAAGGCCTCGC +
Preference number: 4 (lower is better)
Translates to: DVRAILAAKVSMCRREGSAAGAA*PWRRPR
Trigger: GCGAGGCCTTCGCCATGGCCACGCTGCGCCAGCTGC...TGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp GGGCTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGACGCTGCTGTGGCGTGGCCCTCGCGATaGTGTTCACCTGCAGCGTGT +
Preference number: 4 (lower is better)
Translates to: GLLCIGLWSAAFNLDAAVAWPSR*CSPAAC
Trigger: ACACGCTGCAGGTGAACACCATCGCGAGGGCCACGC...CACAGCAGCGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp GGTGCTAGGGACAAAGGGGACCACATGTTAGACCCAGGCACACAGTCCTTCTGTCTTCACCATCTCTCCTaGGGTGCACAGCCGGCTTGG +
Preference number: 4 (lower is better)
Translates to: GARDKGDHMLDPGTQSFCLHHLS*GAQPAW
Trigger: CCAAGCCGGCTGTGCACCCCAGGAGAGATGGTGAAG...ACAGAAGGACTGTGTGCCTGGGTCTAACATGTGGTCCCCTTTGTCCCTAGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR TCA 90 bp CTCACAGCTCAGGGCCCAGTTTGTATGATGTCAGAGCCATCTTGGCTGCAAAAGCCGGCAAACAGGGTCTaGATGCCCCGCGTGGCATTC +
Preference number: 4 (lower is better)
Translates to: LTAQGPVCMMSEPSWLQKPANRV*MPRVAF
Trigger: GAATGCCACGCGGGGCATTCAGACCCTGTTTGCCGG...CTTTTGCAGCCAAGATGGCTCTGACATCATACAAACTGGGCCCTGAGCTGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318227.4
CDS-3UTR TCA 90 bp TTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAGGTGAACTGAGAACAGCCCGGGGGTCTGGCTaGGCTGGATGGCCAAGGGCA +
Preference number: 4 (lower is better)
Translates to: LAAKVSMCRREGSGELRTARGSG*AGWPRA
Trigger: TGCCCTTGGCCATCCAGCTCAGCCAGACCCCCGGGC...TGTTCTCAGTTCACCTGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR TCA 90 bp GGGCTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGACGCTGCTGTGCGGCCCAGGAACGCCTaGGCAAAAATCTCGCCAGTC +
Preference number: 4 (lower is better)
Translates to: GLLCIGLWSAAFNLDAAVRPRNA*AKISPV
Trigger: GACTGGCGAGATTTTTGCTCAGGCGTTCCTGGGCCG...CACAGCAGCGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp TCTCACAGCTCAGGGCCCAGTTTGTATGATGTCAGAGCCATCTTGGCTGCAAAACTATGGTACAGTCCCTaGGTCGCAGCCTCGGCGGGG +
Preference number: 4 (lower is better)
Translates to: SHSSGPSLYDVRAILAAKLWYSP*VAASAG
Trigger: CCCCGCCGAGGCTGCGACGCAGGGACTGTACCATAG...TTTTGCAGCCAAGATGGCTCTGACATCATACAAACTGGGCCCTGAGCTGTGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318227.4
CDS-3UTR GCA 90 bp TCCTTCCTTTCGGAGGGGCTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTCTCCGAAGCTCCCTaGTGGCGGCTCGGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: SFLSEGLLCIGLWSAAFNLSEAP*WRLGLP
Trigger: AGGAAGCCCGAGCCGCCAGCAGGGAGCTTCGGAGAG...GTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCCCCTCCGAAAGGAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp ATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAGGGAAGGAGGAAGGGATaGCCCGGCAACGCTGGCCGC +
Preference number: 4 (lower is better)
Translates to: MSEPSWLQKSPCAEEKVQGRRKG*PGNAGR
Trigger: GCGGCCAGCGTTGCCGGGGCATCCCTTCCTCCTTCC...CTGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp CAAGCTGGGCATTCCAAGAGGCTGGAACAAGAGGCTGCCCCAAGTGGGGCAAGAATTCGATCTAGCCGCTaGTTGGGGCTTTCACCACAC +
Preference number: 4 (lower is better)
Translates to: QAGHSKRLEQEAAPSGARIRSSR*LGLSPH
Trigger: GTGTGGTGAAAGCCCCAAGCAGCGGCTAGATCGAAT...TCTTGCCCCACTTGGGGCAGCCTCTTGTTCCAGCCTCTTGGAATGCCCAGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp GGGCTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGACGCTGCTGTGCAGGGGCGAAGTCCCTaGCCATTCGATCTAGCCGCT +
Preference number: 4 (lower is better)
Translates to: GLLCIGLWSAAFNLDAAVQGRSP*PFDLAA
Trigger: AGCGGCTAGATCGAATGGGCAGGGACTTCGCCCCTG...CACAGCAGCGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp GTCTCTCACAGCTCAGGGCCCAGTTTGTATGATGTCAGAGCCATCTTGGCTGCACAGGGGCGAAGTCCCTaGCCATTCGATCTAGCCGCT +
Preference number: 4 (lower is better)
Translates to: VSHSSGPSLYDVRAILAAQGRSP*PFDLAA
Trigger: AGCGGCTAGATCGAATGGGCAGGGACTTCGCCCCTG...TGCAGCCAAGATGGCTCTGACATCATACAAACTGGGCCCTGAGCTGTGAGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp AAGCTGGGCATTCCAAGAGGCTGGAACAAGAGGCTGCCCCAAGTGGGGCAAGAAGCCTCGCACAGCAAATaGGTGCACAGAAAGTGCGTG +
Preference number: 4 (lower is better)
Translates to: KLGIPRGWNKRLPQVGQEASHSK*VHRKCV
Trigger: CACGCACTTTCTGTGCACGCATTTGCTGTGCGAGGC...TTCTTGCCCCACTTGGGGCAGCCTCTTGTTCCAGCCTCTTGGAATGCCCAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp CTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGACGCTGCTGTGCTGTCGCCAGTCCAGGCCTaGAGCTCCGAATCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LLCIGLWSAAFNLDAAVLSPVQA*SSESCC
Trigger: GCAGCAGGATTCGGAGCTGCAGGCCTGGACTGGCGA...CAGCACAGCAGCGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp GATGAGGGAGAAAAGCTCAGAAACCCAAGCTGGGCATTCCAAGAGGCTGGAACATCGCCAGTCCAGGCCTaGAGCTCCGAATCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: DEGEKLRNPSWAFQEAGTSPVQA*SSESCC
Trigger: GCAGCAGGATTCGGAGCTGCAGGCCTGGACTGGCGA...TGTTCCAGCCTCTTGGAATGCCCAGCTTGGGTTTCTGAGCTTTTCTCCCTCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp CTCACAGCTCAGGGCCCAGTTTGTATGATGTCAGAGCCATCTTGGCTGCAAAAGCAGGTGTCCGGGATCTaGGCCACTAGGGACTGGGGA +
Preference number: 4 (lower is better)
Translates to: LTAQGPVCMMSEPSWLQKQVSGI*ATRDWG
Trigger: TCCCCAGTCCCTAGTGGCCCAGATCCCGGACACCTG...CTTTTGCAGCCAAGATGGCTCTGACATCATACAAACTGGGCCCTGAGCTGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318227.4
CDS-3UTR CCA 90 bp ATGATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTGCTCCAGGACCGCCCTaGGCCTGCAGGATCCTGGGC +
Preference number: 4 (lower is better)
Translates to: MMSEPSWLQKSPCAEEKVAPGPP*ACRILG
Trigger: GCCCAGGATCCTGCAGGCCCAGGGCGGTCCTGGAGC...AACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACATCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318227.4
CDS-3UTR CCA 90 bp GGCTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGACGCTGCTGTGCGCCGGTCCCTCTGGCTaGCTCACCCAGATGGATATC +
Preference number: 4 (lower is better)
Translates to: GYCALDFGQRLLTWTLLCAGPSG*LTQMDI
Trigger: GATATCCATCTGGGTGAGCCAGCCAGAGGGACCGGC...GCACAGCAGCGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp TTTCGGAGGGGCTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGACGCACAGCCGGTCCCTCTaGCTGGCTCACCCAGATGGA +
Preference number: 4 (lower is better)
Translates to: FRRGYCALDFGQRLLTWTHSRSL*LAHPDG
Trigger: TCCATCTGGGTGAGCCAGCCAGAGGGACCGGCTGTG...CGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCCCCTCCGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp GATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCACAGCAGCAGCCGGCCTaGAGGAGAAGAGCGGCACGC +
Preference number: 4 (lower is better)
Translates to: DVRAILAAKVSMCRREGSQQQPA*RRRAAR
Trigger: GCGTGCCGCTCTTCTCCTCCAGGCCGGCTGCTGCTG...TGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp TCTCACAGCTCAGGGCCCAGTTTGTATGATGTCAGAGCCATCTTGGCTGCAAAAGCGGCCACGTACTGCTaGCGGCCGTTTAGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: SHSSGPSLYDVRAILAAKAATYC*RPFRQW
Trigger: CCACTGCCTAAACGGCCGCCAGCAGTACGTGGCCGC...TTTTGCAGCCAAGATGGCTCTGACATCATACAAACTGGGCCCTGAGCTGTGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp TCTCACAGCTCAGGGCCCAGTTTGTATGATGTCAGAGCCATCTTGGCTGCAAAAGGGGTCTGGCTGAGCTaGATGGCCAAGGGCACCAGC +
Preference number: 4 (lower is better)
Translates to: SHSSGPSLYDVRAILAAKGVWLS*MAKGTS
Trigger: GCTGGTGCCCTTGGCCATCCAGCTCAGCCAGACCCC...TTTTGCAGCCAAGATGGCTCTGACATCATACAAACTGGGCCCTGAGCTGTGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp TTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAGGTGAACTGAGAACAGCAGCTGGCGCAGCGTaGCCATGGCGAAGGCCTCGC +
Preference number: 4 (lower is better)
Translates to: LAAKVSMCRREGSGELRTAAGAA*PWRRPR
Trigger: GCGAGGCCTTCGCCATGGCCACGCTGCGCCAGCTGC...TGTTCTCAGTTCACCTGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp TTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAGGTGAACTGAGAACATGGCAGAGCGGCAGCTaGCGCAGCGTGGCCATGGCG +
Preference number: 4 (lower is better)
Translates to: LAAKVSMCRREGSGELRTWQSGS*RSVAMA
Trigger: CGCCATGGCCACGCTGCGCCAGCTGCCGCTCTGCCA...TGTTCTCAGTTCACCTGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp GATGAGGGAGAAAAGCTCAGAAACCCAAGCTGGGCATTCCAAGAGGCTGGAACAGCGTGGCCCTCGCGATaGTGTTCACCTGCAGCGTGT +
Preference number: 4 (lower is better)
Translates to: DEGEKLRNPSWAFQEAGTAWPSR*CSPAAC
Trigger: ACACGCTGCAGGTGAACACCATCGCGAGGGCCACGC...TGTTCCAGCCTCTTGGAATGCCCAGCTTGGGTTTCTGAGCTTTTCTCCCTCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp GGTGCTAGGGACAAAGGGGACCACATGTTAGACCCAGGCACACAGTCCTTCTGTGGTAAGTCTTCAGGGTaGTGGTCCCCTTGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: GARDKGDHMLDPGTQSFCGKSSG*WSPWSG
Trigger: CCCAGACCAAGGGGACCACCACCCTGAAGACTTACC...ACAGAAGGACTGTGTGCCTGGGTCTAACATGTGGTCCCCTTTGTCCCTAGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp GAAACCCAAGCTGGGCATTCCAAGAGGCTGGAACAAGAGGCTGCCCCAAGTGGGGTAGGAGAAGGAGTTTaGGGATTGGGGAGGATGAGG +
Preference number: 4 (lower is better)
Translates to: ETQAGHSKRLEQEAAPSGVGEGV*GLGRMR
Trigger: CCTCATCCTCCCCAATCCCCAAACTCCTTCTCCTAC...CCCACTTGGGGCAGCCTCTTGTTCCAGCCTCTTGGAATGCCCAGCTTGGGTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp AAGCTGGGCATTCCAAGAGGCTGGAACAAGAGGCTGCCCCAAGTGGGGCAAGAACAAACACCCCAGGCCTaGGAACCTGTTCCTGAGAAC +
Preference number: 4 (lower is better)
Translates to: KLGIPRGWNKRLPQVGQEQTPQA*EPVPEN
Trigger: GTTCTCAGGAACAGGTTCCCAGGCCTGGGGTGTTTG...TTCTTGCCCCACTTGGGGCAGCCTCTTGTTCCAGCCTCTTGGAATGCCCAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR TCA 90 bp GGCTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGACGCTGCTGTGCCCACCATGTCATTGGTaGCAGGCAGCTTGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: GYCALDFGQRLLTWTLLCPPCHW*QAACWA
Trigger: TGCCCAGCAAGCTGCCTGTCACCAATGACATGGTGG...GCACAGCAGCGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR TCA 90 bp CTCACAGCTCAGGGCCCAGTTTGTATGATGTCAGAGCCATCTTGGCTGCAAAAGCGGCCCAGGAACGCCTaGGCAAAAATCTCGCCAGTC +
Preference number: 4 (lower is better)
Translates to: LTAQGPVCMMSEPSWLQKRPRNA*AKISPV
Trigger: GACTGGCGAGATTTTTGCTCAGGCGTTCCTGGGCCG...CTTTTGCAGCCAAGATGGCTCTGACATCATACAAACTGGGCCCTGAGCTGTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR TCA 90 bp GGGCTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGACGCTGCTGTGGGGCTGCCTCATGGATaGTGGAGCATTGGGCATCCA +
Preference number: 4 (lower is better)
Translates to: GLLCIGLWSAAFNLDAAVGLPHG*WSIGHP
Trigger: TGGATGCCCAATGCTCCATCATCCATGAGGCAGCCC...CACAGCAGCGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR TCA 90 bp GGGCTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGACGCTGCTGTGAGGGTCTGGAGGACCTaGGGAACTGGTCCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: GLLCIGLWSAAFNLDAAVRVWRT*GTGPPH
Trigger: ATGAGGAGGACCAGTTCCTCAGGTCCTCCAGACCCT...CACAGCAGCGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR TCA 90 bp CAAGCTGGGCATTCCAAGAGGCTGGAACAAGAGGCTGCCCCAAGTGGGGCAAGAGGAGGGATCAGATGCTaGGATGGAGAAAAGGAGGTA +
Preference number: 4 (lower is better)
Translates to: QAGHSKRLEQEAAPSGARGGIRC*DGEKEV
Trigger: TACCTCCTTTTCTCCATCTCAGCATCTGATCCCTCC...TCTTGCCCCACTTGGGGCAGCCTCTTGTTCCAGCCTCTTGGAATGCCCAGCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380149.6
CDS-3UTR GCA 90 bp GATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCACTCTCCGAAGCTCCCTaGTGGCGGCTCGGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: DVRAILAAKVSMCRREGSLSEAP*WRLGLP
Trigger: AGGAAGCCCGAGCCGCCAGCAGGGAGCTTCGGAGAG...TGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp CTCACAGCTCAGGGCCCAGTTTGTATGATGTCAGAGCCATCTTGGCTGCAAAAGCAGGGGCGAAGTCCCTaGCCATTCGATCTAGCCGCT +
Preference number: 4 (lower is better)
Translates to: LTAQGPVCMMSEPSWLQKQGRSP*PFDLAA
Trigger: AGCGGCTAGATCGAATGGGCAGGGACTTCGCCCCTG...CTTTTGCAGCCAAGATGGCTCTGACATCATACAAACTGGGCCCTGAGCTGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp ACCCAAGCTGGGCATTCCAAGAGGCTGGAACAAGAGGCTGCCCCAAGTGGGGCATGCGTGTTGTTTTCGTaGACCAGGAACTCAGAGTTG +
Preference number: 4 (lower is better)
Translates to: TQAGHSKRLEQEAAPSGACVLFS*TRNSEL
Trigger: CAACTCTGAGTTCCTGGTGCACGAAAACAACACGCA...TGCCCCACTTGGGGCAGCCTCTTGTTCCAGCCTCTTGGAATGCCCAGCTTGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp GAAACCCAAGCTGGGCATTCCAAGAGGCTGGAACAAGAGGCTGCCCCAAGTGGGTGCGTGCACAGAAAGTaGGTGTTGTTTTCGTGCACC +
Preference number: 4 (lower is better)
Translates to: ETQAGHSKRLEQEAAPSGCVHRK*VLFSCT
Trigger: GGTGCACGAAAACAACACGCACTTTCTGTGCACGCA...CCCACTTGGGGCAGCCTCTTGTTCCAGCCTCTTGGAATGCCCAGCTTGGGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp GATGAGGGAGAAAAGCTCAGAAACCCAAGCTGGGCATTCCAAGAGGCTGGAACACCATCTCTCCTGGGGTaGACAGCCGGCTTGGGAAAC +
Preference number: 4 (lower is better)
Translates to: DEGEKLRNPSWAFQEAGTPSLLG*TAGLGN
Trigger: GTTTCCCAAGCCGGCTGTGCACCCCAGGAGAGATGG...TGTTCCAGCCTCTTGGAATGCCCAGCTTGGGTTTCTGAGCTTTTCTCCCTCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp CTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGACGCTGCTGTGCTGGGGGTCCAGGCAAGCTaGCCTCCAATTCTTCCCCTC +
Preference number: 4 (lower is better)
Translates to: LLCIGLWSAAFNLDAAVLGVQAS*PPILPL
Trigger: GAGGGGAAGAATTGGAGGGCAGCTTGCCTGGACCCC...CAGCACAGCAGCGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp ATGATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAGCAGCAGCCGGCCTaGAGGAGAAGAGCGGCACGC +
Preference number: 4 (lower is better)
Translates to: MMSEPSWLQKSPCAEEKVQQQPA*RRRAAR
Trigger: GCGTGCCGCTCTTCTCCTCCAGGCCGGCTGCTGCTG...AACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACATCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp TATGATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTCCGATGGACGTGACCTaGTCCACGAGGCCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: YDVRAILAAKVSMCRREGPMDVT*STRPSG
Trigger: CCCCGAGGGCCTCGTGGACCAGGTCACGTCCATCGG...ACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACATCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp AAGCTGGGCATTCCAAGAGGCTGGAACAAGAGGCTGCCCCAAGTGGGGCAAGAATGGATGATGGAGCATTaGGCATCCAGGCCCCAAAGT +
Preference number: 4 (lower is better)
Translates to: KLGIPRGWNKRLPQVGQEWMMEH*ASRPQS
Trigger: ACTTTGGGGCCTGGATGCCCAATGCTCCATCATCCA...TTCTTGCCCCACTTGGGGCAGCCTCTTGTTCCAGCCTCTTGGAATGCCCAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp GATGAGGGAGAAAAGCTCAGAAACCCAAGCTGGGCATTCCAAGAGGCTGGAACAGTGCCCAGGGGCCTCTaGTCCTTGGGTTCTTGGCTA +
Preference number: 4 (lower is better)
Translates to: DEGEKLRNPSWAFQEAGTVPRGL*SLGSWL
Trigger: TAGCCAAGAACCCAAGGACCAGAGGCCCCTGGGCAC...TGTTCCAGCCTCTTGGAATGCCCAGCTTGGGTTTCTGAGCTTTTCTCCCTCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp CTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGACGCTGCTGTGCTGGTGCCCAGGGGCCTCTaGTCCTTGGGTTCTTGGCTA +
Preference number: 4 (lower is better)
Translates to: LLCIGLWSAAFNLDAAVLVPRGL*SLGSWL
Trigger: TAGCCAAGAACCCAAGGACCAGAGGCCCCTGGGCAC...CAGCACAGCAGCGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR TCA 90 bp CTCACAGCTCAGGGCCCAGTTTGTATGATGTCAGAGCCATCTTGGCTGCAAAAGTTGTTTGCTTGCCTCTaGCACAGCCGGTCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: LTAQGPVCMMSEPSWLQKLFACL*HSRSLW
Trigger: CCAGAGGGACCGGCTGTGTCAGAGGCAAGCAAACAA...CTTTTGCAGCCAAGATGGCTCTGACATCATACAAACTGGGCCCTGAGCTGTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR TCA 90 bp TTTCGGAGGGGCTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGACGGGCGGTACACTGCCATaGTGGGAAGGAGGAAGGGAT +
Preference number: 4 (lower is better)
Translates to: FRRGYCALDFGQRLLTWTGGTLP*WEGGRD
Trigger: ATCCCTTCCTCCTTCCCATCATGGCAGTGTACCGCC...CGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCCCCTCCGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR TCA 90 bp ACCCAAGCTGGGCATTCCAAGAGGCTGGAACAAGAGGCTGCCCCAAGTGGGGCAAGGGGAAGAGAGTCCTaGCAAATAGTTCTTGCTGTT +
Preference number: 4 (lower is better)
Translates to: TQAGHSKRLEQEAAPSGARGRES*QIVLAV
Trigger: AACAGCAAGAACTATTTGTCAGGACTCTCTTCCCCT...TGCCCCACTTGGGGCAGCCTCTTGTTCCAGCCTCTTGGAATGCCCAGCTTGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR TCA 90 bp ACCCAAGCTGGGCATTCCAAGAGGCTGGAACAAGAGGCTGCCCCAAGTGGGGCAGGCAAATTTCTTGTCTaGCTCCATCTCCTGAAAGCT +
Preference number: 4 (lower is better)
Translates to: TQAGHSKRLEQEAAPSGAGKFLV*LHLLKA
Trigger: AGCTTTCAGGAGATGGAGTCAGACAAGAAATTTGCC...TGCCCCACTTGGGGCAGCCTCTTGTTCCAGCCTCTTGGAATGCCCAGCTTGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR TCA 90 bp CTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGACGCTGCTGTGCTGCCACCATGTCATTGGTaGCAGGCAGCTTGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: LLCIGLWSAAFNLDAAVLPPCHW*QAACWA
Trigger: TGCCCAGCAAGCTGCCTGTCACCAATGACATGGTGG...CAGCACAGCAGCGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR TCA 90 bp CTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGACGCTGCTGTGCTGAGAAATTGGTGTAGGTaGAGTGGGCCAGGCCCGTGC +
Preference number: 4 (lower is better)
Translates to: LLCIGLWSAAFNLDAAVLRNWCR*SGPGPC
Trigger: GCACGGGCCTGGCCCACTTCACCTACACCAATTTCT...CAGCACAGCAGCGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR TCA 90 bp AGTGAAGCGGTTCCTTCCTTTCGGAGGGGCTATTGTGCATTGGACTTTGGTCAGAGGGTCTGGAGGACCTaGGGAACTGGTCCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: SEAVPSFRRGYCALDFGQRVWRT*GTGPPH
Trigger: ATGAGGAGGACCAGTTCCTCAGGTCCTCCAGACCCT...CTGACCAAAGTCCAATGCACAATAGCCCCTCCGAAAGGAAGGAACCGCTTCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR TCA 90 bp TTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAGGTGAACTGAGAACAGTCAGCGGCCCGGACTaGTGCCCTGGAGTGCTTGTC +
Preference number: 4 (lower is better)
Translates to: LAAKVSMCRREGSGELRTVSGPD*CPGVLV
Trigger: GACAAGCACTCCAGGGCATCAGTCCGGGCCGCTGAC...TGTTCTCAGTTCACCTGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380149.6
CDS-3UTR TCA 90 bp CTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGACGCTGCTGTGCTGCTGGGAACCTGTTCCTaGGAACAGCCGTTAGGGGTC +
Preference number: 4 (lower is better)
Translates to: LLCIGLWSAAFNLDAAVLLGTCS*EQPLGV
Trigger: GACCCCTAACGGCTGTTCTCAGGAACAGGTTCCCAG...CAGCACAGCAGCGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR TCA 90 bp GATGAGGGAGAAAAGCTCAGAAACCCAAGCTGGGCATTCCAAGAGGCTGGAACACTGGGAACCTGTTCCTaGGAACAGCCGTTAGGGGTC +
Preference number: 4 (lower is better)
Translates to: DEGEKLRNPSWAFQEAGTLGTCS*EQPLGV
Trigger: GACCCCTAACGGCTGTTCTCAGGAACAGGTTCCCAG...TGTTCCAGCCTCTTGGAATGCCCAGCTTGGGTTTCTGAGCTTTTCTCCCTCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp TTTCGGAGGGGCTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGACGAGATGTTGTCCAGTGTaGCGGCCCTCAGGTAGGGAC +
Preference number: 4 (lower is better)
Translates to: FRRGYCALDFGQRLLTWTRCCPV*RPSGRD
Trigger: GTCCCTACCTGAGGGCCGGCACACTGGACAACATCT...CGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCCCCTCCGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp GGCTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGACGCTGCTGTGCGCCTCAGCTCCACGGTaGAGTAGCCTTCAATCCACT +
Preference number: 4 (lower is better)
Translates to: GYCALDFGQRLLTWTLLCASAPR*SSLQST
Trigger: AGTGGATTGAAGGCTACTGCACCGTGGAGCTGAGGC...GCACAGCAGCGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp CAAGCTGGGCATTCCAAGAGGCTGGAACAAGAGGCTGCCCCAAGTGGGGCAAGACTGACAAATAGTTCTTaGTGTTCCTGGCCTCAGCTC +
Preference number: 4 (lower is better)
Translates to: QAGHSKRLEQEAAPSGARLTNSS*CSWPQL
Trigger: GAGCTGAGGCCAGGAACAGCAAGAACTATTTGTCAG...TCTTGCCCCACTTGGGGCAGCCTCTTGTTCCAGCCTCTTGGAATGCCCAGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp CTCACAGCTCAGGGCCCAGTTTGTATGATGTCAGAGCCATCTTGGCTGCAAAAGCCAGGAACTCAGAGTTaGGCACCCACGTCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: LTAQGPVCMMSEPSWLQKPGTQS*APTSWP
Trigger: TGGCCAAGACGTGGGTGCGCAACTCTGAGTTCCTGG...CTTTTGCAGCCAAGATGGCTCTGACATCATACAAACTGGGCCCTGAGCTGTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp AAGCTGGGCATTCCAAGAGGCTGGAACAAGAGGCTGCCCCAAGTGGGGCAAGAACGCACAGCAAATGCGTaGACAGAAAGTGCGTGTTGT +
Preference number: 4 (lower is better)
Translates to: KLGIPRGWNKRLPQVGQERTANA*TESACC
Trigger: ACAACACGCACTTTCTGTGCACGCATTTGCTGTGCG...TTCTTGCCCCACTTGGGGCAGCCTCTTGTTCCAGCCTCTTGGAATGCCCAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp GGGCTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGACGCTGCTGTGGCGATGGTGTTCACCTaGAGCGTGTATCGAGTGTGG +
Preference number: 4 (lower is better)
Translates to: GLLCIGLWSAAFNLDAAVAMVFT*SVYRVW
Trigger: CCACACTCGATACACGCTGCAGGTGAACACCATCGC...CACAGCAGCGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp TCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAGGTGCCATCTCTCCTGGGGTaGACAGCCGGCTTGGGAAAC +
Preference number: 4 (lower is better)
Translates to: SEPSWLQKSPCAEEKVQVPSLLG*TAGLGN
Trigger: GTTTCCCAAGCCGGCTGTGCACCCCAGGAGAGATGG...CACCTGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp TTTCGGAGGGGCTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGACGGCCCCAAAGTCATGCTaGCCACTGTTGACAGCAGCG +
Preference number: 4 (lower is better)
Translates to: FRRGYCALDFGQRLLTWTAPKSC*PLLTAA
Trigger: CGCTGCTGTCAACAGTGGGCAGCATGACTTTGGGGC...CGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCCCCTCCGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp GATGAGGGAGAAAAGCTCAGAAACCCAAGCTGGGCATTCCAAGAGGCTGGAACAGCCCCAAAGTCATGCTaGCCACTGTTGACAGCAGCG +
Preference number: 4 (lower is better)
Translates to: DEGEKLRNPSWAFQEAGTAPKSC*PLLTAA
Trigger: CGCTGCTGTCAACAGTGGGCAGCATGACTTTGGGGC...TGTTCCAGCCTCTTGGAATGCCCAGCTTGGGTTTCTGAGCTTTTCTCCCTCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp GGGCTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGACGCTGCTGTGCAGGCCCCAAAGTCATaGTGCCCACTGTTGACAGCA +
Preference number: 4 (lower is better)
Translates to: GLLCIGLWSAAFNLDAAVQAPKS*CPLLTA
Trigger: TGCTGTCAACAGTGGGCAGCATGACTTTGGGGCCTG...CACAGCAGCGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp CTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGACGCTGCTGTGCTGGCTGGAACAAGAGGCTaGCCCAAGTGGGGCAAGAAG +
Preference number: 4 (lower is better)
Translates to: LLCIGLWSAAFNLDAAVLAGTRG*PKWGKK
Trigger: CTTCTTGCCCCACTTGGGGCAGCCTCTTGTTCCAGC...CAGCACAGCAGCGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp GGGCTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGACGCTGCTGTGGCTGGCTCACCCAGATaGATATCAGGAGCCTGGGTT +
Preference number: 4 (lower is better)
Translates to: GLLCIGLWSAAFNLDAAVAGSPR*ISGAWV
Trigger: AACCCAGGCTCCTGATATCCATCTGGGTGAGCCAGC...CACAGCAGCGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp ATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAGCACAGCCGGTCCCTCTaGCTGGCTCACCCAGATGGA +
Preference number: 4 (lower is better)
Translates to: MSEPSWLQKSPCAEEKVQHSRSL*LAHPDG
Trigger: TCCATCTGGGTGAGCCAGCCAGAGGGACCGGCTGTG...CTGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp ATGATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTTCCGAAGCTCCCTGCTaGCGGCTCGGGCTTCCTCTC +
Preference number: 4 (lower is better)
Translates to: MMSEPSWLQKSPCAEEKVSEAPC*RLGLPL
Trigger: GAGAGGAAGCCCGAGCCGCCAGCAGGGAGCTTCGGA...AACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACATCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp TTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAGGTGAACTGAGAACATCCGAAGCTCCCTGCTaGCGGCTCGGGCTTCCTCTC +
Preference number: 4 (lower is better)
Translates to: LAAKVSMCRREGSGELRTSEAPC*RLGLPL
Trigger: GAGAGGAAGCCCGAGCCGCCAGCAGGGAGCTTCGGA...TGTTCTCAGTTCACCTGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp GGTGCTAGGGACAAAGGGGACCACATGTTAGACCCAGGCACACAGTCCTTCTGTTCTCTGGGATGTTCCTaGGCTTTCTCTCTCCGAAGC +
Preference number: 4 (lower is better)
Translates to: GARDKGDHMLDPGTQSFCSLGCS*AFSLRS
Trigger: GCTTCGGAGAGAGAAAGCCCAGGAACATCCCAGAGA...ACAGAAGGACTGTGTGCCTGGGTCTAACATGTGGTCCCCTTTGTCCCTAGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp GTCTCTCACAGCTCAGGGCCCAGTTTGTATGATGTCAGAGCCATCTTGGCTGCATCAGGTAGGGACCAGTaGTCACACACAGGCGGTACA +
Preference number: 4 (lower is better)
Translates to: VSHSSGPSLYDVRAILAASGRDQ*SHTGGT
Trigger: TGTACCGCCTGTGTGTGACCACTGGTCCCTACCTGA...TGCAGCCAAGATGGCTCTGACATCATACAAACTGGGCCCTGAGCTGTGAGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp GATGAGGGAGAAAAGCTCAGAAACCCAAGCTGGGCATTCCAAGAGGCTGGAACAGATCTAGCCGCTGCTTaGGGCTTTCACCACACGTGC +
Preference number: 4 (lower is better)
Translates to: DEGEKLRNPSWAFQEAGTDLAAA*GFHHTC
Trigger: GCACGTGTGGTGAAAGCCCCAAGCAGCGGCTAGATC...TGTTCCAGCCTCTTGGAATGCCCAGCTTGGGTTTCTGAGCTTTTCTCCCTCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp GAAACCCAAGCTGGGCATTCCAAGAGGCTGGAACAAGAGGCTGCCCCAAGTGGGAAGCTAGAGATGCAGTaGAGCATGACGGGATTGACA +
Preference number: 4 (lower is better)
Translates to: ETQAGHSKRLEQEAAPSGKLEMQ*SMTGLT
Trigger: TGTCAATCCCGTCATGCTCCACTGCATCTCTAGCTT...CCCACTTGGGGCAGCCTCTTGTTCCAGCCTCTTGGAATGCCCAGCTTGGGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp ATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAGGTGAACTGAGACCACAGCAGGCACAGTaGGGCGGCCACGTACTGCTG +
Preference number: 4 (lower is better)
Translates to: ILAAKVSMCRREGSGELRPQQAQ*GGHVLL
Trigger: CAGCAGTACGTGGCCGCCCCACTGTGCCTGCTGTGG...TCTCAGTTCACCTGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp AGTGAAGCGGTTCCTTCCTTTCGGAGGGGCTATTGTGCATTGGACTTTGGTCAGGTAGGAGCTTGTAGATaGGGTGGCAGAGCGGCAGCT +
Preference number: 4 (lower is better)
Translates to: SEAVPSFRRGYCALDFGQVGACR*GGRAAA
Trigger: AGCTGCCGCTCTGCCACCCCATCTACAAGCTCCTAC...CTGACCAAAGTCCAATGCACAATAGCCCCTCCGAAAGGAAGGAACCGCTTCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp GGTGCTAGGGACAAAGGGGACCACATGTTAGACCCAGGCACACAGTCCTTCTGTAGACAAAGCTCTCAATaGCCGCCCAGATCTTCAGGC +
Preference number: 4 (lower is better)
Translates to: GARDKGDHMLDPGTQSFCRQSSQ*PPRSSG
Trigger: GCCTGAAGATCTGGGCGGCCATTGAGAGCTTTGTCT...ACAGAAGGACTGTGTGCCTGGGTCTAACATGTGGTCCCCTTTGTCCCTAGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp TTTCGGAGGGGCTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGACGGTGGGGGCTGCCTCATaGATGATGGAGCATTGGGCA +
Preference number: 4 (lower is better)
Translates to: FRRGYCALDFGQRLLTWTVGAAS*MMEHWA
Trigger: TGCCCAATGCTCCATCATCCATGAGGCAGCCCCCAC...CGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCCCCTCCGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp CTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGACGCTGCTGTGCTGGTGGGGGCTGCCTCATaGATGATGGAGCATTGGGCA +
Preference number: 4 (lower is better)
Translates to: LLCIGLWSAAFNLDAAVLVGAAS*MMEHWA
Trigger: TGCCCAATGCTCCATCATCCATGAGGCAGCCCCCAC...CAGCACAGCAGCGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp TCCTTTCGGAGGGGCTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGAAGTCTTCAGGGTGGTaGTCCCCTTGGTCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: SFRRGYCALDFGQRLLTWKSSGW*SPWSGV
Trigger: CACCCCAGACCAAGGGGACCACCACCCTGAAGACTT...CCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCCCCTCCGAAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp GGCTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGACGCTGCTGTGCCAGCGGCTTTTAACCTaGACGCTGCTGTGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: GYCALDFGQRLLTWTLLCQRLLT*TLLCWS
Trigger: AGACCAGCACAGCAGCGTCCAGGTTAAAAGCCGCTG...GCACAGCAGCGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
3UTR CAA 72 bp GAAGCGGTTCCTTCCTTTCGGAGGGGCTATTGTGCATaGGACTTTGGTCAGCGGCTTTTAACCTGGACGCTG +
Preference number: 4 (lower is better)
Translates to: EAVPSFRRGYCA*DFGQRLLTWTL
Trigger: CAGCGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCCCCTCCGAAAGGAAGGAACCGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR TCA 90 bp AGTGAAGCGGTTCCTTCCTTTCGGAGGGGCTATTGTGCATTGGACTTTGGTCAGACGTGCCCACCAGTGTaGCAGAGATGTTGTCCAGTG +
Preference number: 4 (lower is better)
Translates to: SEAVPSFRRGYCALDFGQTCPPV*QRCCPV
Trigger: CACTGGACAACATCTCTGTCACACTGGTGGGCACGT...CTGACCAAAGTCCAATGCACAATAGCCCCTCCGAAAGGAAGGAACCGCTTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR TCA 90 bp GGGCTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGACGCTGCTGTGTCTCCTGAAAGCTGTTaGCGTCTACCATGCAGGGGA +
Preference number: 4 (lower is better)
Translates to: GLLCIGLWSAAFNLDAAVSPESC*RLPCRG
Trigger: TCCCCTGCATGGTAGACGTCAACAGCTTTCAGGAGA...CACAGCAGCGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR TCA 90 bp TTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAGGTGAACTGAGAACACCGGCTTGGGAAACCTaGGCTTTCCCGGCCCAGGAA +
Preference number: 4 (lower is better)
Translates to: LAAKVSMCRREGSGELRTPAWET*AFPAQE
Trigger: TTCCTGGGCCGGGAAAGCTCAGGTTTCCCAAGCCGG...TGTTCTCAGTTCACCTGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR TCA 90 bp GGCTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGACGCTGCTGTGCAAGTGGGGCAAGAAGTaGAGCGGTTCCTTCCTTTCG +
Preference number: 4 (lower is better)
Translates to: GYCALDFGQRLLTWTLLCKWGKK*SGSFLS
Trigger: CGAAAGGAAGGAACCGCTTCACTTCTTGCCCCACTT...GCACAGCAGCGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp GAAACCCAAGCTGGGCATTCCAAGAGGCTGGAACAAGAGGCTGCCCCAAGTGGGACTCTAATACTTGTTTaGTTGCCTCTGACACAGCCG +
Preference number: 4 (lower is better)
Translates to: ETQAGHSKRLEQEAAPSGTLILV*LPLTQP
Trigger: CGGCTGTGTCAGAGGCAAGCAAACAAGTATTAGAGT...CCCACTTGGGGCAGCCTCTTGTTCCAGCCTCTTGGAATGCCCAGCTTGGGTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp CTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGACGCTGCTGTGCTGCTCTCTAGCTCTGTCTaGAGGCATGTGTCCTGTCCC +
Preference number: 4 (lower is better)
Translates to: LLCIGLWSAAFNLDAAVLLSSSV*RHVSCP
Trigger: GGGACAGGACACATGCCTGCAGACAGAGCTAGAGAG...CAGCACAGCAGCGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp CTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGACGCTGCTGTGCTGGCGATGGTGTTCACCTaGAGCGTGTATCGAGTGTGG +
Preference number: 4 (lower is better)
Translates to: LLCIGLWSAAFNLDAAVLAMVFT*SVYRVW
Trigger: CCACACTCGATACACGCTGCAGGTGAACACCATCGC...CAGCACAGCAGCGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp TCCTTTCGGAGGGGCTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGGCGATGGTGTTCACCTaGAGCGTGTATCGAGTGTGG +
Preference number: 4 (lower is better)
Translates to: SFRRGYCALDFGQRLLTWAMVFT*SVYRVW
Trigger: CCACACTCGATACACGCTGCAGGTGAACACCATCGC...CCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCCCCTCCGAAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp TATGATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCGCCAGTCCAGGCCTaGAGCTCCGAATCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: YDVRAILAAKVSMCRREGSPVQA*SSESCC
Trigger: GCAGCAGGATTCGGAGCTGCAGGCCTGGACTGGCGA...ACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACATCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp CAAGCTGGGCATTCCAAGAGGCTGGAACAAGAGGCTGCCCCAAGTGGGGCAAGAAACTGGTCCTCCTCATaGTTGGACCTTTCTTTCTTC +
Preference number: 4 (lower is better)
Translates to: QAGHSKRLEQEAAPSGARNWSSS*LDLSFF
Trigger: GAAGAAAGAAAGGTCCAAGCATGAGGAGGACCAGTT...TCTTGCCCCACTTGGGGCAGCCTCTTGTTCCAGCCTCTTGGAATGCCCAGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp GGCTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGACGCTGCTGTGCTCGGAGGGGCTATTGTaGATTGGACTTTGGTCAGCG +
Preference number: 4 (lower is better)
Translates to: GYCALDFGQRLLTWTLLCSEGLL*IGLWSA
Trigger: CGCTGACCAAAGTCCAATGCACAATAGCCCCTCCGA...GCACAGCAGCGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp GATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAACTGATGCCCTGGAGTaGTTGTCCGCCCACTCCCCA +
Preference number: 4 (lower is better)
Translates to: DVRAILAAKVSMCRREGSTDALE*LSAHSP
Trigger: TGGGGAGTGGGCGGACAAGCACTCCAGGGCATCAGT...TGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380149.6
CDS-3UTR CCA 90 bp GTCTCTCACAGCTCAGGGCCCAGTTTGTATGATGTCAGAGCCATCTTGGCTGCATTCCAGCCTCTACTATaGTACAGTCCCTGCGTCGCA +
Preference number: 4 (lower is better)
Translates to: VSHSSGPSLYDVRAILAAFQPLL*YSPCVA
Trigger: TGCGACGCAGGGACTGTACCATAGTAGAGGCTGGAA...TGCAGCCAAGATGGCTCTGACATCATACAAACTGGGCCCTGAGCTGTGAGAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318227.4
CDS-3UTR CCA 90 bp TCAGGGCCCAGTTTGTATGATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTCTGAATGCCCCGCGTaGCATTCTTTCCGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: SGPSLYDVRAILAAKVSMSECPA*HSFRSR
Trigger: CCTGGAGCGGAAAGAATGCCACGCGGGGCATTCAGA...CATGGAGACTTTTGCAGCCAAGATGGCTCTGACATCATACAAACTGGGCCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318227.4
CDS-3UTR CCA 90 bp TTTCGGAGGGGCTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGACGGCTGGCTCACCCAGATaGATATCAGGAGCCTGGGTT +
Preference number: 4 (lower is better)
Translates to: FRRGYCALDFGQRLLTWTAGSPR*ISGAWV
Trigger: AACCCAGGCTCCTGATATCCATCTGGGTGAGCCAGC...CGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCCCCTCCGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp TCCTTCCTTTCGGAGGGGCTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACGGGCCCAGCTCTCTCTaGGATGTTCCTGGGCTTTCT +
Preference number: 4 (lower is better)
Translates to: SFLSEGLLCIGLWSAAFNGPSSL*DVPGLS
Trigger: AGAAAGCCCAGGAACATCCCAGAGAGAGCTGGGCCC...GTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCCCCTCCGAAAGGAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp CTCACAGCTCAGGGCCCAGTTTGTATGATGTCAGAGCCATCTTGGCTGCAAAAGTCAGGTAGGGACCAGTaGTCACACACAGGCGGTACA +
Preference number: 4 (lower is better)
Translates to: LTAQGPVCMMSEPSWLQKSGRDQ*SHTGGT
Trigger: TGTACCGCCTGTGTGTGACCACTGGTCCCTACCTGA...CTTTTGCAGCCAAGATGGCTCTGACATCATACAAACTGGGCCCTGAGCTGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp GGGCTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGACGCTGCTGTGAGACAAAGCTCTCAATaGCCGCCCAGATCTTCAGGC +
Preference number: 4 (lower is better)
Translates to: GLLCIGLWSAAFNLDAAVRQSSQ*PPRSSG
Trigger: GCCTGAAGATCTGGGCGGCCATTGAGAGCTTTGTCT...CACAGCAGCGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp GGCTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGACGCTGCTGTGCTGGATGATGGAGCATTaGGCATCCAGGCCCCAAAGT +
Preference number: 4 (lower is better)
Translates to: GYCALDFGQRLLTWTLLCWMMEH*ASRPQS
Trigger: ACTTTGGGGCCTGGATGCCCAATGCTCCATCATCCA...GCACAGCAGCGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp TCAGGGCCCAGTTTGTATGATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGGGTAAGTCTTCAGGGTaGTGGTCCCCTTGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: SGPSLYDVRAILAAKVSMGKSSG*WSPWSG
Trigger: CCCAGACCAAGGGGACCACCACCCTGAAGACTTACC...CATGGAGACTTTTGCAGCCAAGATGGCTCTGACATCATACAAACTGGGCCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp ATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAGGTGCCCAGGGGCCTCTaGTCCTTGGGTTCTTGGCTA +
Preference number: 4 (lower is better)
Translates to: MSEPSWLQKSPCAEEKVQVPRGL*SLGSWL
Trigger: TAGCCAAGAACCCAAGGACCAGAGGCCCCTGGGCAC...CTGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp TTTCGGAGGGGCTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGACGGAGGACCTGAGGAACTaGTCCTCCTCATGCTTGGAC +
Preference number: 4 (lower is better)
Translates to: FRRGYCALDFGQRLLTWTEDLRN*SSSCLD
Trigger: GTCCAAGCATGAGGAGGACCAGTTCCTCAGGTCCTC...CGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCCCCTCCGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp TATGATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTCCCGGACTGATGCCCTaGAGTGCTTGTCCGCCCACT +
Preference number: 4 (lower is better)
Translates to: YDVRAILAAKVSMCRREGPGLMP*SACPPT
Trigger: AGTGGGCGGACAAGCACTCCAGGGCATCAGTCCGGG...ACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACATCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380149.6
CDS-3UTR CCA 90 bp CTCACAGCTCAGGGCCCAGTTTGTATGATGTCAGAGCCATCTTGGCTGCAAAAGGGCATTCCAAGAGGCTaGAACAAGAGGCTGCCCCAA +
Preference number: 4 (lower is better)
Translates to: LTAQGPVCMMSEPSWLQKGIPRG*NKRLPQ
Trigger: TTGGGGCAGCCTCTTGTTCCAGCCTCTTGGAATGCC...CTTTTGCAGCCAAGATGGCTCTGACATCATACAAACTGGGCCCTGAGCTGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp TTTCGGAGGGGCTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGACGTCCAGAGAAGGAAGCTaGGCTGGTGGCTCTAGGCTT +
Preference number: 4 (lower is better)
Translates to: FRRGYCALDFGQRLLTWTSREGS*AGGSRL
Trigger: AAGCCTAGAGCCACCAGCCCAGCTTCCTTCTCTGGA...CGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCCCCTCCGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR TCA 90 bp GGGCTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGACGCTGCTGTGTCTGACTCCATCTCCTaGAAGCTGTTGACGTCTACC +
Preference number: 4 (lower is better)
Translates to: GLLCIGLWSAAFNLDAAVSDSIS*KLLTST
Trigger: GGTAGACGTCAACAGCTTTCAGGAGATGGAGTCAGA...CACAGCAGCGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR TCA 90 bp GATGAGGGAGAAAAGCTCAGAAACCCAAGCTGGGCATTCCAAGAGGCTGGAACAGATCGTCTTGGTGGCTaGGTATCGAACATTGGGCTC +
Preference number: 4 (lower is better)
Translates to: DEGEKLRNPSWAFQEAGTDRLGG*VSNIGL
Trigger: GAGCCCAATGTTCGATACTCAGCCACCAAGACGATC...TGTTCCAGCCTCTTGGAATGCCCAGCTTGGGTTTCTGAGCTTTTCTCCCTCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR TCA 90 bp TCTCACAGCTCAGGGCCCAGTTTGTATGATGTCAGAGCCATCTTGGCTGCAAAAACGCAGGGATGGCATTaGAGAGCAGCGAGATCGTCT +
Preference number: 4 (lower is better)
Translates to: SHSSGPSLYDVRAILAAKTQGWH*RAARSS
Trigger: AGACGATCTCGCTGCTCTTCAATGCCATCCCTGCGT...TTTTGCAGCCAAGATGGCTCTGACATCATACAAACTGGGCCCTGAGCTGTGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR TCA 90 bp GATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAAGAAATTGGTGTAGGTaGAGTGGGCCAGGCCCGTGC +
Preference number: 4 (lower is better)
Translates to: DVRAILAAKVSMCRREGSRNWCR*SGPGPC
Trigger: GCACGGGCCTGGCCCACTTCACCTACACCAATTTCT...TGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR TCA 90 bp TTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAGGTGAACTGAGAACACGGCCCAGGAACGCCTaGGCAAAAATCTCGCCAGTC +
Preference number: 4 (lower is better)
Translates to: LAAKVSMCRREGSGELRTRPRNA*AKISPV
Trigger: GACTGGCGAGATTTTTGCTCAGGCGTTCCTGGGCCG...TGTTCTCAGTTCACCTGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR TCA 90 bp CTCACAGCTCAGGGCCCAGTTTGTATGATGTCAGAGCCATCTTGGCTGCAAAAGGGAGGTTGTTACAGCTaGTGTTCACTTCAGGGAGGG +
Preference number: 4 (lower is better)
Translates to: LTAQGPVCMMSEPSWLQKGGCYS*CSLQGG
Trigger: CCCTCCCTGAAGTGAACATCAGCTGTAACAACCTCC...CTTTTGCAGCCAAGATGGCTCTGACATCATACAAACTGGGCCCTGAGCTGTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR TCA 90 bp AGTGAAGCGGTTCCTTCCTTTCGGAGGGGCTATTGTGCATTGGACTTTGGTCAGAGGGCCCAGTTTGTATaGTGTCAGAGCCATCTTGGC +
Preference number: 4 (lower is better)
Translates to: SEAVPSFRRGYCALDFGQRAQFV*CQSHLG
Trigger: GCCAAGATGGCTCTGACATCATACAAACTGGGCCCT...CTGACCAAAGTCCAATGCACAATAGCCCCTCCGAAAGGAAGGAACCGCTTCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp GATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAAGATGTTGTCCAGTGTaGCGGCCCTCAGGTAGGGAC +
Preference number: 4 (lower is better)
Translates to: DVRAILAAKVSMCRREGSRCCPV*RPSGRD
Trigger: GTCCCTACCTGAGGGCCGGCACACTGGACAACATCT...TGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp TCAGGGCCCAGTTTGTATGATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGGCCTCAGCTCCACGGTaGAGTAGCCTTCAATCCACT +
Preference number: 4 (lower is better)
Translates to: SGPSLYDVRAILAAKVSMASAPR*SSLQST
Trigger: AGTGGATTGAAGGCTACTGCACCGTGGAGCTGAGGC...CATGGAGACTTTTGCAGCCAAGATGGCTCTGACATCATACAAACTGGGCCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp TCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAGGTGTCTTCCAGGAGCCCTTaGGATCCAACAGCCCTCGAA +
Preference number: 4 (lower is better)
Translates to: SEPSWLQKSPCAEEKVQVSSRSP*DPTALE
Trigger: TTCGAGGGCTGTTGGATCGCAAGGGCTCCTGGAAGA...CACCTGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp TCTCACAGCTCAGGGCCCAGTTTGTATGATGTCAGAGCCATCTTGGCTGCAAAACTCTCTAGCTCTGTCTaGAGGCATGTGTCCTGTCCC +
Preference number: 4 (lower is better)
Translates to: SHSSGPSLYDVRAILAAKLSSSV*RHVSCP
Trigger: GGGACAGGACACATGCCTGCAGACAGAGCTAGAGAG...TTTTGCAGCCAAGATGGCTCTGACATCATACAAACTGGGCCCTGAGCTGTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp TCCTTCCTTTCGGAGGGGCTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTCTCTAGCTCTGTCTaGAGGCATGTGTCCTGTCCC +
Preference number: 4 (lower is better)
Translates to: SFLSEGLLCIGLWSAAFNLSSSV*RHVSCP
Trigger: GGGACAGGACACATGCCTGCAGACAGAGCTAGAGAG...GTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCCCCTCCGAAAGGAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp ATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAGCCAGGAACTCAGAGTTaGGCACCCACGTCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: MSEPSWLQKSPCAEEKVQPGTQS*APTSWP
Trigger: TGGCCAAGACGTGGGTGCGCAACTCTGAGTTCCTGG...CTGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp GTCTCTCACAGCTCAGGGCCCAGTTTGTATGATGTCAGAGCCATCTTGGCTGCATGCGTGCACAGAAAGTaGGTGTTGTTTTCGTGCACC +
Preference number: 4 (lower is better)
Translates to: VSHSSGPSLYDVRAILAACVHRK*VLFSCT
Trigger: GGTGCACGAAAACAACACGCACTTTCTGTGCACGCA...TGCAGCCAAGATGGCTCTGACATCATACAAACTGGGCCCTGAGCTGTGAGAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp TCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAGGTGAGCTCCGAATCCTGCTaGACAGATGCGTCACTGGGA +
Preference number: 4 (lower is better)
Translates to: SEPSWLQKSPCAEEKVQVSSESC*TDASLG
Trigger: TCCCAGTGACGCATCTGTGCAGCAGGATTCGGAGCT...CACCTGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp TCAGGGCCCAGTTTGTATGATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGCTCCGAATCCTaGTGCACAGATGCGTCACTG +
Preference number: 4 (lower is better)
Translates to: SGPSLYDVRAILAAKVSMCSSES*CTDASL
Trigger: CAGTGACGCATCTGTGCAGCAGGATTCGGAGCTGCA...CATGGAGACTTTTGCAGCCAAGATGGCTCTGACATCATACAAACTGGGCCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp TCCTTCCTTTCGGAGGGGCTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCAGGCCCCAAAGTCATaGTGCCCACTGTTGACAGCA +
Preference number: 4 (lower is better)
Translates to: SFLSEGLLCIGLWSAAFNQAPKS*CPLLTA
Trigger: TGCTGTCAACAGTGGGCAGCATGACTTTGGGGCCTG...GTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCCCCTCCGAAAGGAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp TCTCACAGCTCAGGGCCCAGTTTGTATGATGTCAGAGCCATCTTGGCTGCAAAACAGGCCCCAAAGTCATaGTGCCCACTGTTGACAGCA +
Preference number: 4 (lower is better)
Translates to: SHSSGPSLYDVRAILAAKQAPKS*CPLLTA
Trigger: TGCTGTCAACAGTGGGCAGCATGACTTTGGGGCCTG...TTTTGCAGCCAAGATGGCTCTGACATCATACAAACTGGGCCCTGAGCTGTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp AAGCTGGGCATTCCAAGAGGCTGGAACAAGAGGCTGCCCCAAGTGGGGCAAGAAAACTGGTCCTCCTCATaGTTGGACCTTTCTTTCTTC +
Preference number: 4 (lower is better)
Translates to: KLGIPRGWNKRLPQVGQENWSSS*LDLSFF
Trigger: GAAGAAAGAAAGGTCCAAGCATGAGGAGGACCAGTT...TTCTTGCCCCACTTGGGGCAGCCTCTTGTTCCAGCCTCTTGGAATGCCCAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp GTCTCTCACAGCTCAGGGCCCAGTTTGTATGATGTCAGAGCCATCTTGGCTGCACAGAGCCATCTTGGCTaGAAAAGTCTCCATGTGCAG +
Preference number: 4 (lower is better)
Translates to: VSHSSGPSLYDVRAILAAQSHLG*KSLHVQ
Trigger: CTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTG...TGCAGCCAAGATGGCTCTGACATCATACAAACTGGGCCCTGAGCTGTGAGAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp ATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAGTGGGCCACTAGGGACTaGGGAGGAACCTCTCAGAGA +
Preference number: 4 (lower is better)
Translates to: MSEPSWLQKSPCAEEKVQWATRD*GGTSQR
Trigger: TCTCTGAGAGGTTCCTCCCCAGTCCCTAGTGGCCCA...CTGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318227.4
CDS-3UTR CCA 90 bp GGCTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGACGCTGCTGTGCACTCATTCTCTGCTCTaGAGTAGGGCAGGTCAGGAA +
Preference number: 4 (lower is better)
Translates to: GYCALDFGQRLLTWTLLCTHSLL*SRAGQE
Trigger: TTCCTGACCTGCCCTACTCCAGAGCAGAGAATGAGT...GCACAGCAGCGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318227.4
CDS-3UTR CCA 90 bp TCTCACAGCTCAGGGCCCAGTTTGTATGATGTCAGAGCCATCTTGGCTGCAAAAGCTGGCTCACCCAGATaGATATCAGGAGCCTGGGTT +
Preference number: 4 (lower is better)
Translates to: SHSSGPSLYDVRAILAAKAGSPR*ISGAWV
Trigger: AACCCAGGCTCCTGATATCCATCTGGGTGAGCCAGC...TTTTGCAGCCAAGATGGCTCTGACATCATACAAACTGGGCCCTGAGCTGTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp CTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGACGCTGCTGTGCTGTCTCTGGGATGTTCCTaGGCTTTCTCTCTCCGAAGC +
Preference number: 4 (lower is better)
Translates to: LLCIGLWSAAFNLDAAVLSLGCS*AFSLRS
Trigger: GCTTCGGAGAGAGAAAGCCCAGGAACATCCCAGAGA...CAGCACAGCAGCGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp GATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAGATCTAGCCGCTGCTTaGGGCTTTCACCACACGTGC +
Preference number: 4 (lower is better)
Translates to: DVRAILAAKVSMCRREGSDLAAA*GFHHTC
Trigger: GCACGTGTGGTGAAAGCCCCAAGCAGCGGCTAGATC...TGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp TCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAGGTGAGTTCTTGCTGTTCCTaGCCTCAGCTCCACGGTGCA +
Preference number: 4 (lower is better)
Translates to: SEPSWLQKSPCAEEKVQVSSCCS*PQLHGA
Trigger: TGCACCGTGGAGCTGAGGCCAGGAACAGCAAGAACT...CACCTGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp AGTGAAGCGGTTCCTTCCTTTCGGAGGGGCTATTGTGCATTGGACTTTGGTCAGGGATGTCAATTTTCATaGGGAAGCCGGGCAGGTACC +
Preference number: 4 (lower is better)
Translates to: SEAVPSFRRGYCALDFGQGCQFS*GSRAGT
Trigger: GGTACCTGCCCGGCTTCCCCATGAAAATTGACATCC...CTGACCAAAGTCCAATGCACAATAGCCCCTCCGAAAGGAAGGAACCGCTTCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp GGCTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGACGCTGCTGTGCGCGAGATCGTCTTGGTaGCTGAGTATCGAACATTGG +
Preference number: 4 (lower is better)
Translates to: GYCALDFGQRLLTWTLLCARSSW*LSIEHW
Trigger: CCAATGTTCGATACTCAGCCACCAAGACGATCTCGC...GCACAGCAGCGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp GTCTCTCACAGCTCAGGGCCCAGTTTGTATGATGTCAGAGCCATCTTGGCTGCAGCAGCGAGATCGTCTTaGTGGCTGAGTATCGAACAT +
Preference number: 4 (lower is better)
Translates to: VSHSSGPSLYDVRAILAAAARSS*WLSIEH
Trigger: ATGTTCGATACTCAGCCACCAAGACGATCTCGCTGC...TGCAGCCAAGATGGCTCTGACATCATACAAACTGGGCCCTGAGCTGTGAGAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp GATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAGTAGGAGCTTGTAGATaGGGTGGCAGAGCGGCAGCT +
Preference number: 4 (lower is better)
Translates to: DVRAILAAKVSMCRREGSVGACR*GGRAAA
Trigger: AGCTGCCGCTCTGCCACCCCATCTACAAGCTCCTAC...TGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp GTCTCTCACAGCTCAGGGCCCAGTTTGTATGATGTCAGAGCCATCTTGGCTGCAGCACAGATGCGTCACTaGGATAATAGTAGCCCACGA +
Preference number: 4 (lower is better)
Translates to: VSHSSGPSLYDVRAILAAAQMRH*DNSSPR
Trigger: TCGTGGGCTACTATTATCCCAGTGACGCATCTGTGC...TGCAGCCAAGATGGCTCTGACATCATACAAACTGGGCCCTGAGCTGTGAGAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp ATGATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCTTCACCATCTCTCCTaGGGTGCACAGCCGGCTTGG +
Preference number: 4 (lower is better)
Translates to: MMSEPSWLQKSPCAEEKVLHHLS*GAQPAW
Trigger: CCAAGCCGGCTGTGCACCCCAGGAGAGATGGTGAAG...AACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACATCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp TCCTTTCGGAGGGGCTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGTGGATGATGGAGCATTaGGCATCCAGGCCCCAAAGT +
Preference number: 4 (lower is better)
Translates to: SFRRGYCALDFGQRLLTWWMMEH*ASRPQS
Trigger: ACTTTGGGGCCTGGATGCCCAATGCTCCATCATCCA...CCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCCCCTCCGAAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp GATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAGGTAAGTCTTCAGGGTaGTGGTCCCCTTGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: DVRAILAAKVSMCRREGSGKSSG*WSPWSG
Trigger: CCCAGACCAAGGGGACCACCACCCTGAAGACTTACC...TGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp TCCTTCCTTTCGGAGGGGCTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCAGCGGCTTTTAACCTaGACGCTGCTGTGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: SFLSEGLLCIGLWSAAFNQRLLT*TLLCWS
Trigger: AGACCAGCACAGCAGCGTCCAGGTTAAAAGCCGCTG...GTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCCCCTCCGAAAGGAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp TCAGGGCCCAGTTTGTATGATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGGGCATTCCAAGAGGCTaGAACAAGAGGCTGCCCCAA +
Preference number: 4 (lower is better)
Translates to: SGPSLYDVRAILAAKVSMGIPRG*NKRLPQ
Trigger: TTGGGGCAGCCTCTTGTTCCAGCCTCTTGGAATGCC...CATGGAGACTTTTGCAGCCAAGATGGCTCTGACATCATACAAACTGGGCCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp GATGAGGGAGAAAAGCTCAGAAACCCAAGCTGGGCATTCCAAGAGGCTGGAACACTCAGAAACCCAAGCTaGGCATTCCAAGAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: DEGEKLRNPSWAFQEAGTLRNPS*AFQEAG
Trigger: TCCAGCCTCTTGGAATGCCCAGCTTGGGTTTCTGAG...TGTTCCAGCCTCTTGGAATGCCCAGCTTGGGTTTCTGAGCTTTTCTCCCTCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp TCCTTTCGGAGGGGCTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGCTCAGAAACCCAAGCTaGGCATTCCAAGAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: SFRRGYCALDFGQRLLTWLRNPS*AFQEAG
Trigger: TCCAGCCTCTTGGAATGCCCAGCTTGGGTTTCTGAG...CCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCCCCTCCGAAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR TCA 90 bp TTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAGGTGAACTGAGAACATTGTTTGCTTGCCTCTaGCACAGCCGGTCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: LAAKVSMCRREGSGELRTLFACL*HSRSLW
Trigger: CCAGAGGGACCGGCTGTGTCAGAGGCAAGCAAACAA...TGTTCTCAGTTCACCTGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR TCA 90 bp TATGATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTTGTTTGCTTGCCTCTaGCACAGCCGGTCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: YDVRAILAAKVSMCRREGLFACL*HSRSLW
Trigger: CCAGAGGGACCGGCTGTGTCAGAGGCAAGCAAACAA...ACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACATCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR TCA 90 bp TCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAGGTGTCTCCTGAAAGCTGTTaGCGTCTACCATGCAGGGGA +
Preference number: 4 (lower is better)
Translates to: SEPSWLQKSPCAEEKVQVSPESC*RLPCRG
Trigger: TCCCCTGCATGGTAGACGTCAACAGCTTTCAGGAGA...CACCTGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR TCA 90 bp TCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAGGTGGATCGTCTTGGTGGCTaGGTATCGAACATTGGGCTC +
Preference number: 4 (lower is better)
Translates to: SEPSWLQKSPCAEEKVQVDRLGG*VSNIGL
Trigger: GAGCCCAATGTTCGATACTCAGCCACCAAGACGATC...CACCTGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR TCA 90 bp TATGATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTCCACCATGTCATTGGTaGCAGGCAGCTTGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: YDVRAILAAKVSMCRREGPPCHW*QAACWA
Trigger: TGCCCAGCAAGCTGCCTGTCACCAATGACATGGTGG...ACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACATCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR TCA 90 bp ATGATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTGGGCTGCCTCATGGATaGTGGAGCATTGGGCATCCA +
Preference number: 4 (lower is better)
Translates to: MMSEPSWLQKSPCAEEKVGLPHG*WSIGHP
Trigger: TGGATGCCCAATGCTCCATCATCCATGAGGCAGCCC...AACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACATCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR TCA 90 bp TCCTTCCTTTCGGAGGGGCTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACAAGTGGGGCAAGAAGTaGAGCGGTTCCTTCCTTTCG +
Preference number: 4 (lower is better)
Translates to: SFLSEGLLCIGLWSAAFNKWGKK*SGSFLS
Trigger: CGAAAGGAAGGAACCGCTTCACTTCTTGCCCCACTT...GTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCCCCTCCGAAAGGAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp GGCTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGACGCTGCTGTGCCTCCGCCCACAGTCTTaGACTCTAATACTTGTTTGC +
Preference number: 4 (lower is better)
Translates to: GYCALDFGQRLLTWTLLCLRPQS*TLILVC
Trigger: GCAAACAAGTATTAGAGTGCAAGACTGTGGGCGGAG...GCACAGCAGCGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp CTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGACGCTGCTGTGCTGAGTACCAAGAGTCCTTaGGGAAGAAAGCGTAGCGCT +
Preference number: 4 (lower is better)
Translates to: LLCIGLWSAAFNLDAAVLSTKSP*GRKRSA
Trigger: AGCGCTACGCTTTCTTCCGCAAGGACTCTTGGTACT...CAGCACAGCAGCGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp GATGAGGGAGAAAAGCTCAGAAACCCAAGCTGGGCATTCCAAGAGGCTGGAACAAGTACCAAGAGTCCTTaGGGAAGAAAGCGTAGCGCT +
Preference number: 4 (lower is better)
Translates to: DEGEKLRNPSWAFQEAGTSTKSP*GRKRSA
Trigger: AGCGCTACGCTTTCTTCCGCAAGGACTCTTGGTACT...TGTTCCAGCCTCTTGGAATGCCCAGCTTGGGTTTCTGAGCTTTTCTCCCTCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp TCCTTTCGGAGGGGCTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGAGTACCAAGAGTCCTTaGGGAAGAAAGCGTAGCGCT +
Preference number: 4 (lower is better)
Translates to: SFRRGYCALDFGQRLLTWSTKSP*GRKRSA
Trigger: AGCGCTACGCTTTCTTCCGCAAGGACTCTTGGTACT...CCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCCCCTCCGAAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp CTCACAGCTCAGGGCCCAGTTTGTATGATGTCAGAGCCATCTTGGCTGCAAAAGCGCACAGCAAATGCGTaGACAGAAAGTGCGTGTTGT +
Preference number: 4 (lower is better)
Translates to: LTAQGPVCMMSEPSWLQKRTANA*TESACC
Trigger: ACAACACGCACTTTCTGTGCACGCATTTGCTGTGCG...CTTTTGCAGCCAAGATGGCTCTGACATCATACAAACTGGGCCCTGAGCTGTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp GATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAAGCTCCGAATCCTGCTaGACAGATGCGTCACTGGGA +
Preference number: 4 (lower is better)
Translates to: DVRAILAAKVSMCRREGSSSESC*TDASLG
Trigger: TCCCAGTGACGCATCTGTGCAGCAGGATTCGGAGCT...TGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp TTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAGGTGAACTGAGAACAACCTGGACGCTGCTGTaGTGGTCTCTCACAGCTCAG +
Preference number: 4 (lower is better)
Translates to: LAAKVSMCRREGSGELRTTWTLL*WSLTAQ
Trigger: CTGAGCTGTGAGAGACCAGCACAGCAGCGTCCAGGT...TGTTCTCAGTTCACCTGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp ATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAGGTGAACTGAGAACCTGGACGCTGCTGTaGTGGTCTCTCACAGCTCAG +
Preference number: 4 (lower is better)
Translates to: ILAAKVSMCRREGSGELRTWTLL*WSLTAQ
Trigger: CTGAGCTGTGAGAGACCAGCACAGCAGCGTCCAGGT...TCTCAGTTCACCTGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp TCAGGGCCCAGTTTGTATGATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTCGGAGGGGCTATTGTaGATTGGACTTTGGTCAGCG +
Preference number: 4 (lower is better)
Translates to: SGPSLYDVRAILAAKVSMSEGLL*IGLWSA
Trigger: CGCTGACCAAAGTCCAATGCACAATAGCCCCTCCGA...CATGGAGACTTTTGCAGCCAAGATGGCTCTGACATCATACAAACTGGGCCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp TCTCACAGCTCAGGGCCCAGTTTGTATGATGTCAGAGCCATCTTGGCTGCAAAATCGGAGGGGCTATTGTaGATTGGACTTTGGTCAGCG +
Preference number: 4 (lower is better)
Translates to: SHSSGPSLYDVRAILAAKSEGLL*IGLWSA
Trigger: CGCTGACCAAAGTCCAATGCACAATAGCCCCTCCGA...TTTTGCAGCCAAGATGGCTCTGACATCATACAAACTGGGCCCTGAGCTGTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp ATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAGGTGAACTGAGAGCTGGAACAAGAGGCTaGCCCAAGTGGGGCAAGAAG +
Preference number: 4 (lower is better)
Translates to: ILAAKVSMCRREGSGELRAGTRG*PKWGKK
Trigger: CTTCTTGCCCCACTTGGGGCAGCCTCTTGTTCCAGC...TCTCAGTTCACCTGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp GATGAGGGAGAAAAGCTCAGAAACCCAAGCTGGGCATTCCAAGAGGCTGGAACACACACAGTCCTTCTGTaGCCAGTTTCCAGGCTTTTC +
Preference number: 4 (lower is better)
Translates to: DEGEKLRNPSWAFQEAGTHTVLL*PVSRLF
Trigger: GAAAAGCCTGGAAACTGGGCACAGAAGGACTGTGTG...TGTTCCAGCCTCTTGGAATGCCCAGCTTGGGTTTCTGAGCTTTTCTCCCTCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp ATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAGGTGAACTGAGAGGGCCCAGCTCTCTCTaGGATGTTCCTGGGCTTTCT +
Preference number: 4 (lower is better)
Translates to: ILAAKVSMCRREGSGELRGPSSL*DVPGLS
Trigger: AGAAAGCCCAGGAACATCCCAGAGAGAGCTGGGCCC...TCTCAGTTCACCTGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp GATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCATCAGGTAGGGACCAGTaGTCACACACAGGCGGTACA +
Preference number: 4 (lower is better)
Translates to: DVRAILAAKVSMCRREGSSGRDQ*SHTGGT
Trigger: TGTACCGCCTGTGTGTGACCACTGGTCCCTACCTGA...TGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp GATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAAGTTCTTGCTGTTCCTaGCCTCAGCTCCACGGTGCA +
Preference number: 4 (lower is better)
Translates to: DVRAILAAKVSMCRREGSSSCCS*PQLHGA
Trigger: TGCACCGTGGAGCTGAGGCCAGGAACAGCAAGAACT...TGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp TCTCACAGCTCAGGGCCCAGTTTGTATGATGTCAGAGCCATCTTGGCTGCAAAACCACTGCTGTCACCCTaGTCTACACAAGTTGTCGTC +
Preference number: 4 (lower is better)
Translates to: SHSSGPSLYDVRAILAAKPLLSP*STQVVV
Trigger: GACGACAACTTGTGTAGACCAGGGTGACAGCAGTGG...TTTTGCAGCCAAGATGGCTCTGACATCATACAAACTGGGCCCTGAGCTGTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp TCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAGGTGGGATGTCAATTTTCATaGGGAAGCCGGGCAGGTACC +
Preference number: 4 (lower is better)
Translates to: SEPSWLQKSPCAEEKVQVGCQFS*GSRAGT
Trigger: GGTACCTGCCCGGCTTCCCCATGAAAATTGACATCC...CACCTGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp GGCTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGACGCTGCTGTGCAAGCTAGAGATGCAGTaGAGCATGACGGGATTGACA +
Preference number: 4 (lower is better)
Translates to: GYCALDFGQRLLTWTLLCKLEMQ*SMTGLT
Trigger: TGTCAATCCCGTCATGCTCCACTGCATCTCTAGCTT...GCACAGCAGCGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp AGTGAAGCGGTTCCTTCCTTTCGGAGGGGCTATTGTGCATTGGACTTTGGTCAGGCACAGATGCGTCACTaGGATAATAGTAGCCCACGA +
Preference number: 4 (lower is better)
Translates to: SEAVPSFRRGYCALDFGQAQMRH*DNSSPR
Trigger: TCGTGGGCTACTATTATCCCAGTGACGCATCTGTGC...CTGACCAAAGTCCAATGCACAATAGCCCCTCCGAAAGGAAGGAACCGCTTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp ATGATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTGTGGGGGCTGCCTCATaGATGATGGAGCATTGGGCA +
Preference number: 4 (lower is better)
Translates to: MMSEPSWLQKSPCAEEKVVGAAS*MMEHWA
Trigger: TGCCCAATGCTCCATCATCCATGAGGCAGCCCCCAC...AACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACATCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp ATGATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTAAGTCTTCAGGGTGGTaGTCCCCTTGGTCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: MMSEPSWLQKSPCAEEKVKSSGW*SPWSGV
Trigger: CACCCCAGACCAAGGGGACCACCACCCTGAAGACTT...AACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACATCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp AGTGAAGCGGTTCCTTCCTTTCGGAGGGGCTATTGTGCATTGGACTTTGGTCAGTGGTCCTTGGGTTCTTaGCTAACCAACCAGAAGAGG +
Preference number: 4 (lower is better)
Translates to: SEAVPSFRRGYCALDFGQWSLGS*LTNQKR
Trigger: CCTCTTCTGGTTGGTTAGCCAAGAACCCAAGGACCA...CTGACCAAAGTCCAATGCACAATAGCCCCTCCGAAAGGAAGGAACCGCTTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp TTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAGGTGAACTGAGAACATGGATATCAGGAGCCTaGGTTCCACTGCGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: LAAKVSMCRREGSGELRTWISGA*VPLRRE
Trigger: CTCCCTCCGCAGTGGAACCCAGGCTCCTGATATCCA...TGTTCTCAGTTCACCTGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380149.6
CDS-3UTR CCA 90 bp ATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAGTCCAGAGAAGGAAGCTaGGCTGGTGGCTCTAGGCTT +
Preference number: 4 (lower is better)
Translates to: MSEPSWLQKSPCAEEKVQSREGS*AGGSRL
Trigger: AAGCCTAGAGCCACCAGCCCAGCTTCCTTCTCTGGA...CTGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp CTCACAGCTCAGGGCCCAGTTTGTATGATGTCAGAGCCATCTTGGCTGCAAAAGTGGATATCAGGAGCCTaGGTTCCACTGCATTCCTAC +
Preference number: 4 (lower is better)
Translates to: LTAQGPVCMMSEPSWLQKWISGA*VPLHSY
Trigger: GTAGGAATGCAGTGGAACCCAGGCTCCTGATATCCA...CTTTTGCAGCCAAGATGGCTCTGACATCATACAAACTGGGCCCTGAGCTGTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448843.7
CDS-3UTR TCA 90 bp ATGATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTACGTGCCCACCAGTGTaGCAGAGATGTTGTCCAGTG +
Preference number: 4 (lower is better)
Translates to: MMSEPSWLQKSPCAEEKVTCPPV*QRCCPV
Trigger: CACTGGACAACATCTCTGTCACACTGGTGGGCACGT...AACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACATCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR TCA 90 bp TCTCACAGCTCAGGGCCCAGTTTGTATGATGTCAGAGCCATCTTGGCTGCAAAAGTAGCCCACGATTTCTaGGACAAAGCTCTCAATGGC +
Preference number: 4 (lower is better)
Translates to: SHSSGPSLYDVRAILAAKVAHDF*DKALNG
Trigger: GCCATTGAGAGCTTTGTCTCAGAAATCGTGGGCTAC...TTTTGCAGCCAAGATGGCTCTGACATCATACAAACTGGGCCCTGAGCTGTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR TCA 90 bp GATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAGGAGGTTGTTACAGCTaGTGTTCACTTCAGGGAGGG +
Preference number: 4 (lower is better)
Translates to: DVRAILAAKVSMCRREGSGGCYS*CSLQGG
Trigger: CCCTCCCTGAAGTGAACATCAGCTGTAACAACCTCC...TGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR TCA 90 bp GATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAAGGGCCCAGTTTGTATaGTGTCAGAGCCATCTTGGC +
Preference number: 4 (lower is better)
Translates to: DVRAILAAKVSMCRREGSRAQFV*CQSHLG
Trigger: GCCAAGATGGCTCTGACATCATACAAACTGGGCCCT...TGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR TCA 90 bp GGTGCTAGGGACAAAGGGGACCACATGTTAGACCCAGGCACACAGTCCTTCTGTGAAAGGGGAGTTGGATaGAATCTTTGGAGAAAGACA +
Preference number: 4 (lower is better)
Translates to: GARDKGDHMLDPGTQSFCERGVG*NLWRKT
Trigger: TGTCTTTCTCCAAAGATTTCATCCAACTCCCCTTTC...ACAGAAGGACTGTGTGCCTGGGTCTAACATGTGGTCCCCTTTGTCCCTAGCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp GTCTCTCACAGCTCAGGGCCCAGTTTGTATGATGTCAGAGCCATCTTGGCTGCAACTCTAATACTTGTTTaGTTGCCTCTGACACAGCCG +
Preference number: 4 (lower is better)
Translates to: VSHSSGPSLYDVRAILAATLILV*LPLTQP
Trigger: CGGCTGTGTCAGAGGCAAGCAAACAAGTATTAGAGT...TGCAGCCAAGATGGCTCTGACATCATACAAACTGGGCCCTGAGCTGTGAGAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp TTTCGGAGGGGCTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGACGCTCCGCCCACAGTCTTaGACTCTAATACTTGTTTGC +
Preference number: 4 (lower is better)
Translates to: FRRGYCALDFGQRLLTWTLRPQS*TLILVC
Trigger: GCAAACAAGTATTAGAGTGCAAGACTGTGGGCGGAG...CGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCCCCTCCGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp GATGAGGGAGAAAAGCTCAGAAACCCAAGCTGGGCATTCCAAGAGGCTGGAACACTCCGCCCACAGTCTTaGACTCTAATACTTGTTTGC +
Preference number: 4 (lower is better)
Translates to: DEGEKLRNPSWAFQEAGTLRPQS*TLILVC
Trigger: GCAAACAAGTATTAGAGTGCAAGACTGTGGGCGGAG...TGTTCCAGCCTCTTGGAATGCCCAGCTTGGGTTTCTGAGCTTTTCTCCCTCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp ATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAGGTGAACTGAGAGCCTCAGCTCCACGGTaGAGTAGCCTTCAATCCACT +
Preference number: 4 (lower is better)
Translates to: ILAAKVSMCRREGSGELRASAPR*SSLQST
Trigger: AGTGGATTGAAGGCTACTGCACCGTGGAGCTGAGGC...TCTCAGTTCACCTGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp TTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAGGTGAACTGAGAACATCTTCCAGGAGCCCTTaGGATCCAACAGCCCTCGAA +
Preference number: 4 (lower is better)
Translates to: LAAKVSMCRREGSGELRTSSRSP*DPTALE
Trigger: TTCGAGGGCTGTTGGATCGCAAGGGCTCCTGGAAGA...TGTTCTCAGTTCACCTGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp GGCTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGACGCTGCTGTGCCACCAGAAGATGTTCTaGATGTCATCCAGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: GYCALDFGQRLLTWTLLCHQKMF*MSSSFF
Trigger: GAAGAAGCTGGATGACATGCAGAACATCTTCTGGTG...GCACAGCAGCGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp CTCACAGCTCAGGGCCCAGTTTGTATGATGTCAGAGCCATCTTGGCTGCAAAAGTGCGTGTTGTTTTCGTaGACCAGGAACTCAGAGTTG +
Preference number: 4 (lower is better)
Translates to: LTAQGPVCMMSEPSWLQKCVLFS*TRNSEL
Trigger: CAACTCTGAGTTCCTGGTGCACGAAAACAACACGCA...CTTTTGCAGCCAAGATGGCTCTGACATCATACAAACTGGGCCCTGAGCTGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp TATGATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTGCCTCGCACAGCAAATaGGTGCACAGAAAGTGCGTG +
Preference number: 4 (lower is better)
Translates to: YDVRAILAAKVSMCRREGASHSK*VHRKCV
Trigger: CACGCACTTTCTGTGCACGCATTTGCTGTGCGAGGC...ACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACATCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp GGCTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGACGCTGCTGTGCATCCTGCTGCACAGATaGGTCACTGGGATAATAGTA +
Preference number: 4 (lower is better)
Translates to: GYCALDFGQRLLTWTLLCILLHR*VTGIIV
Trigger: TACTATTATCCCAGTGACGCATCTGTGCAGCAGGAT...GCACAGCAGCGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp ATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAGGTGAACTGAGAAGCTCCGAATCCTGCTaGACAGATGCGTCACTGGGA +
Preference number: 4 (lower is better)
Translates to: ILAAKVSMCRREGSGELRSSESC*TDASLG
Trigger: TCCCAGTGACGCATCTGTGCAGCAGGATTCGGAGCT...TCTCAGTTCACCTGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp ATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAGGTGAACTGAGATGCAGCTCCGAATCCTaGTGCACAGATGCGTCACTG +
Preference number: 4 (lower is better)
Translates to: ILAAKVSMCRREGSGELRCSSES*CTDASL
Trigger: CAGTGACGCATCTGTGCAGCAGGATTCGGAGCTGCA...TCTCAGTTCACCTGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp TCCTTCCTTTCGGAGGGGCTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCAGAGCCATCTTGGCTaGAAAAGTCTCCATGTGCAG +
Preference number: 4 (lower is better)
Translates to: SFLSEGLLCIGLWSAAFNQSHLG*KSLHVQ
Trigger: CTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTG...GTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCCCCTCCGAAAGGAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp TCAGGGCCCAGTTTGTATGATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGCACACAGTCCTTCTGTaGCCAGTTTCCAGGCTTTTC +
Preference number: 4 (lower is better)
Translates to: SGPSLYDVRAILAAKVSMHTVLL*PVSRLF
Trigger: GAAAAGCCTGGAAACTGGGCACAGAAGGACTGTGTG...CATGGAGACTTTTGCAGCCAAGATGGCTCTGACATCATACAAACTGGGCCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp TCAGGGCCCAGTTTGTATGATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGGATATCAGGAGCCTaGGTTCCACTCATTCTCTGC +
Preference number: 4 (lower is better)
Translates to: SGPSLYDVRAILAAKVSMWISGA*VPLILC
Trigger: GCAGAGAATGAGTGGAACCCAGGCTCCTGATATCCA...CATGGAGACTTTTGCAGCCAAGATGGCTCTGACATCATACAAACTGGGCCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318227.4
CDS-3UTR CCA 90 bp ATGATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTAGTTCTTGCTGTTCCTaGCCTCAGCTCCACGGTGCA +
Preference number: 4 (lower is better)
Translates to: MMSEPSWLQKSPCAEEKVSSCCS*PQLHGA
Trigger: TGCACCGTGGAGCTGAGGCCAGGAACAGCAAGAACT...AACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACATCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp GGCTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGACGCTGCTGTGCACCTTTCTTTCTTCTTaGGTGGTATTTGGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: GYCALDFGQRLLTWTLLCTFLSS*VVFGGG
Trigger: ACCACCCCCAAATACCACCCAAGAAGAAAGAAAGGT...GCACAGCAGCGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp ATGATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAGCGGCTTTTAACCTaGACGCTGCTGTGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: MMSEPSWLQKSPCAEEKVQRLLT*TLLCWS
Trigger: AGACCAGCACAGCAGCGTCCAGGTTAAAAGCCGCTG...AACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACATCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp GGCTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGACGCTGCTGTGCTTGTGCATTGGACTTTaGTCAGCGGCTTTTAACCTG +
Preference number: 4 (lower is better)
Translates to: GYCALDFGQRLLTWTLLCLCIGL*SAAFNL
Trigger: CAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAA...GCACAGCAGCGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp ATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAGGTAGGAGAAGGAGTTTaGGGATTGGGGAGGATGAGG +
Preference number: 4 (lower is better)
Translates to: MSEPSWLQKSPCAEEKVQVGEGV*GLGRMR
Trigger: CCTCATCCTCCCCAATCCCCAAACTCCTTCTCCTAC...CTGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp ATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAGGTGAACTGAGACAAACACCCCAGGCCTaGGAACCTGTTCCTGAGAAC +
Preference number: 4 (lower is better)
Translates to: ILAAKVSMCRREGSGELRQTPQA*EPVPEN
Trigger: GTTCTCAGGAACAGGTTCCCAGGCCTGGGGTGTTTG...TCTCAGTTCACCTGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
3UTR CAA 72 bp AGCTCAGGGCCCAGTTTGTATGATGTCAGAGCCATCTaGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGT +
Preference number: 4 (lower is better)
Translates to: SSGPSLYDVRAI*AAKVSMCRREG
Trigger: ACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACATCATACAAACTGGGCCCTGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR TCA 90 bp ATGATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTTCTCCTGAAAGCTGTTaGCGTCTACCATGCAGGGGA +
Preference number: 4 (lower is better)
Translates to: MMSEPSWLQKSPCAEEKVSPESC*RLPCRG
Trigger: TCCCCTGCATGGTAGACGTCAACAGCTTTCAGGAGA...AACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACATCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR TCA 90 bp CTCACAGCTCAGGGCCCAGTTTGTATGATGTCAGAGCCATCTTGGCTGCAAAAGGGCAAATTTCTTGTCTaGCTCCATCTCCTGAAAGCT +
Preference number: 4 (lower is better)
Translates to: LTAQGPVCMMSEPSWLQKGKFLV*LHLLKA
Trigger: AGCTTTCAGGAGATGGAGTCAGACAAGAAATTTGCC...CTTTTGCAGCCAAGATGGCTCTGACATCATACAAACTGGGCCCTGAGCTGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR TCA 90 bp TTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAGGTGAACTGAGAACAGATCGTCTTGGTGGCTaGGTATCGAACATTGGGCTC +
Preference number: 4 (lower is better)
Translates to: LAAKVSMCRREGSGELRTDRLGG*VSNIGL
Trigger: GAGCCCAATGTTCGATACTCAGCCACCAAGACGATC...TGTTCTCAGTTCACCTGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR TCA 90 bp GATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAGTAGCCCACGATTTCTaGGACAAAGCTCTCAATGGC +
Preference number: 4 (lower is better)
Translates to: DVRAILAAKVSMCRREGSVAHDF*DKALNG
Trigger: GCCATTGAGAGCTTTGTCTCAGAAATCGTGGGCTAC...TGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp TATGATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTCAAACAGGGTCTGAATaGCCCGCGTGGCATTCTTTC +
Preference number: 4 (lower is better)
Translates to: YDVRAILAAKVSMCRREGQTGSE*PAWHSF
Trigger: GAAAGAATGCCACGCGGGGCATTCAGACCCTGTTTG...ACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACATCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318227.4
CDS-3UTR GCA 90 bp TATGATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTGTTCCACTCATTCTCTaGTCTGGAGTAGGGCAGGTC +
Preference number: 4 (lower is better)
Translates to: YDVRAILAAKVSMCRREGVPLIL*SGVGQV
Trigger: GACCTGCCCTACTCCAGAGCAGAGAATGAGTGGAAC...ACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACATCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318227.4
CDS-3UTR GCA 90 bp ATGATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTACACAGGCGGTACACTaGCATGATGGGAAGGAGGAA +
Preference number: 4 (lower is better)
Translates to: MMSEPSWLQKSPCAEEKVTQAVH*HDGKEE
Trigger: TTCCTCCTTCCCATCATGGCAGTGTACCGCCTGTGT...AACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACATCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp TATGATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTACACAGGCGGTACACTaGCATGATGGGAAGGAGGAA +
Preference number: 4 (lower is better)
Translates to: YDVRAILAAKVSMCRREGTQAVH*HDGKEE
Trigger: TTCCTCCTTCCCATCATGGCAGTGTACCGCCTGTGT...ACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACATCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp TTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAGGTGAACTGAGAACAATTCGATCTAGCCGCTaGTTGGGGCTTTCACCACAC +
Preference number: 4 (lower is better)
Translates to: LAAKVSMCRREGSGELRTIRSSR*LGLSPH
Trigger: GTGTGGTGAAAGCCCCAAGCAGCGGCTAGATCGAAT...TGTTCTCAGTTCACCTGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp TATGATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTATTCGATCTAGCCGCTaGTTGGGGCTTTCACCACAC +
Preference number: 4 (lower is better)
Translates to: YDVRAILAAKVSMCRREGIRSSR*LGLSPH
Trigger: GTGTGGTGAAAGCCCCAAGCAGCGGCTAGATCGAAT...ACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACATCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp TCTCACAGCTCAGGGCCCAGTTTGTATGATGTCAGAGCCATCTTGGCTGCAAAACTGACAAATAGTTCTTaGTGTTCCTGGCCTCAGCTC +
Preference number: 4 (lower is better)
Translates to: SHSSGPSLYDVRAILAAKLTNSS*CSWPQL
Trigger: GAGCTGAGGCCAGGAACAGCAAGAACTATTTGTCAG...TTTTGCAGCCAAGATGGCTCTGACATCATACAAACTGGGCCCTGAGCTGTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp ATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAGTGCGTGCACAGAAAGTaGGTGTTGTTTTCGTGCACC +
Preference number: 4 (lower is better)
Translates to: MSEPSWLQKSPCAEEKVQCVHRK*VLFSCT
Trigger: GGTGCACGAAAACAACACGCACTTTCTGTGCACGCA...CTGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp ATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAGCGCACAGCAAATGCGTaGACAGAAAGTGCGTGTTGT +
Preference number: 4 (lower is better)
Translates to: MSEPSWLQKSPCAEEKVQRTANA*TESACC
Trigger: ACAACACGCACTTTCTGTGCACGCATTTGCTGTGCG...CTGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp TCCTTTCGGAGGGGCTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGATCCTGCTGCACAGATaGGTCACTGGGATAATAGTA +
Preference number: 4 (lower is better)
Translates to: SFRRGYCALDFGQRLLTWILLHR*VTGIIV
Trigger: TACTATTATCCCAGTGACGCATCTGTGCAGCAGGAT...CCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCCCCTCCGAAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp CTCACAGCTCAGGGCCCAGTTTGTATGATGTCAGAGCCATCTTGGCTGCAAAAGGCAAAAGTCTCCATGTaGAGAAGAGAAGGTTCAGGT +
Preference number: 4 (lower is better)
Translates to: LTAQGPVCMMSEPSWLQKAKVSM*RREGSG
Trigger: ACCTGAACCTTCTCTTCTGCACATGGAGACTTTTGC...CTTTTGCAGCCAAGATGGCTCTGACATCATACAAACTGGGCCCTGAGCTGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp CTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGACGCTGCTGTGCTGGCAAAAGTCTCCATGTaGAGAAGAGAAGGTTCAGGT +
Preference number: 4 (lower is better)
Translates to: LLCIGLWSAAFNLDAAVLAKVSM*RREGSG
Trigger: ACCTGAACCTTCTCTTCTGCACATGGAGACTTTTGC...CAGCACAGCAGCGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp ATGATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTTCTCTGGGATGTTCCTaGGCTTTCTCTCTCCGAAGC +
Preference number: 4 (lower is better)
Translates to: MMSEPSWLQKSPCAEEKVSLGCS*AFSLRS
Trigger: GCTTCGGAGAGAGAAAGCCCAGGAACATCCCAGAGA...AACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACATCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp TATGATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTCCACTGCTGTCACCCTaGTCTACACAAGTTGTCGTC +
Preference number: 4 (lower is better)
Translates to: YDVRAILAAKVSMCRREGPLLSP*STQVVV
Trigger: GACGACAACTTGTGTAGACCAGGGTGACAGCAGTGG...ACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACATCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp TCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAGGTGCTGAGTATCGAACATTaGGCTCCATGTACATCAGGG +
Preference number: 4 (lower is better)
Translates to: SEPSWLQKSPCAEEKVQVLSIEH*APCTSG
Trigger: CCCTGATGTACATGGAGCCCAATGTTCGATACTCAG...CACCTGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp GATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAGCAGCGAGATCGTCTTaGTGGCTGAGTATCGAACAT +
Preference number: 4 (lower is better)
Translates to: DVRAILAAKVSMCRREGSAARSS*WLSIEH
Trigger: ATGTTCGATACTCAGCCACCAAGACGATCTCGCTGC...TGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp TCAGGGCCCAGTTTGTATGATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGGTCGTGAAGGTCTTATaGCACCAGAAGATGTTCTGC +
Preference number: 4 (lower is better)
Translates to: SGPSLYDVRAILAAKVSMVVKVL*HQKMFC
Trigger: GCAGAACATCTTCTGGTGCCATAAGACCTTCACGAC...CATGGAGACTTTTGCAGCCAAGATGGCTCTGACATCATACAAACTGGGCCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp TCCTTCCTTTCGGAGGGGCTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACGTCGTGAAGGTCTTATaGCACCAGAAGATGTTCTGC +
Preference number: 4 (lower is better)
Translates to: SFLSEGLLCIGLWSAAFNVVKVL*HQKMFC
Trigger: GCAGAACATCTTCTGGTGCCATAAGACCTTCACGAC...GTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCCCCTCCGAAAGGAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp TTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAGGTGAACTGAGAACAAGACAAAGCTCTCAATaGCCGCCCAGATCTTCAGGC +
Preference number: 4 (lower is better)
Translates to: LAAKVSMCRREGSGELRTRQSSQ*PPRSSG
Trigger: GCCTGAAGATCTGGGCGGCCATTGAGAGCTTTGTCT...TGTTCTCAGTTCACCTGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp ATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAGTGGTCCTTGGGTTCTTaGCTAACCAACCAGAAGAGG +
Preference number: 4 (lower is better)
Translates to: MSEPSWLQKSPCAEEKVQWSLGS*LTNQKR
Trigger: CCTCTTCTGGTTGGTTAGCCAAGAACCCAAGGACCA...CTGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp AGTGAAGCGGTTCCTTCCTTTCGGAGGGGCTATTGTGCATTGGACTTTGGTCAGATGTCAGAGCCATCTTaGCTGCAAAAGTCTCCATGT +
Preference number: 4 (lower is better)
Translates to: SEAVPSFRRGYCALDFGQMSEPS*LQKSPC
Trigger: ACATGGAGACTTTTGCAGCCAAGATGGCTCTGACAT...CTGACCAAAGTCCAATGCACAATAGCCCCTCCGAAAGGAAGGAACCGCTTCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp CTCACAGCTCAGGGCCCAGTTTGTATGATGTCAGAGCCATCTTGGCTGCAAAAGTTGTGCATTGGACTTTaGTCAGCGGCTTTTAACCTG +
Preference number: 4 (lower is better)
Translates to: LTAQGPVCMMSEPSWLQKLCIGL*SAAFNL
Trigger: CAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAA...CTTTTGCAGCCAAGATGGCTCTGACATCATACAAACTGGGCCCTGAGCTGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR TCA 90 bp TTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAGGTGAACTGAGAACATCTGACTCCATCTCCTaGAAGCTGTTGACGTCTACC +
Preference number: 4 (lower is better)
Translates to: LAAKVSMCRREGSGELRTSDSIS*KLLTST
Trigger: GGTAGACGTCAACAGCTTTCAGGAGATGGAGTCAGA...TGTTCTCAGTTCACCTGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR TCA 90 bp ATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAGGTGAACTGAGATCTGACTCCATCTCCTaGAAGCTGTTGACGTCTACC +
Preference number: 4 (lower is better)
Translates to: ILAAKVSMCRREGSGELRSDSIS*KLLTST
Trigger: GGTAGACGTCAACAGCTTTCAGGAGATGGAGTCAGA...TCTCAGTTCACCTGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR TCA 90 bp TCTCACAGCTCAGGGCCCAGTTTGTATGATGTCAGAGCCATCTTGGCTGCAAAAGGCAAATTTCTTGTCTaGCTCCATCTCCTGAAAGCT +
Preference number: 4 (lower is better)
Translates to: SHSSGPSLYDVRAILAAKGKFLV*LHLLKA
Trigger: AGCTTTCAGGAGATGGAGTCAGACAAGAAATTTGCC...TTTTGCAGCCAAGATGGCTCTGACATCATACAAACTGGGCCCTGAGCTGTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR TCA 90 bp TATGATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTGTAGCCCACGATTTCTaGGACAAAGCTCTCAATGGC +
Preference number: 4 (lower is better)
Translates to: YDVRAILAAKVSMCRREGVAHDF*DKALNG
Trigger: GCCATTGAGAGCTTTGTCTCAGAAATCGTGGGCTAC...ACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACATCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp GTCTCTCACAGCTCAGGGCCCAGTTTGTATGATGTCAGAGCCATCTTGGCTGCAGCAATTGAAGATGATTaGAGTGAGGAACTTCACCAT +
Preference number: 4 (lower is better)
Translates to: VSHSSGPSLYDVRAILAAAIEDD*SEELHH
Trigger: ATGGTGAAGTTCCTCACTGCAATCATCTTCAATTGC...TGCAGCCAAGATGGCTCTGACATCATACAAACTGGGCCCTGAGCTGTGAGAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp GATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCACTGAGTATCGAACATTaGGCTCCATGTACATCAGGG +
Preference number: 4 (lower is better)
Translates to: DVRAILAAKVSMCRREGSLSIEH*APCTSG
Trigger: CCCTGATGTACATGGAGCCCAATGTTCGATACTCAG...TGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp ATGATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTGCGAGATCGTCTTGGTaGCTGAGTATCGAACATTGG +
Preference number: 4 (lower is better)
Translates to: MMSEPSWLQKSPCAEEKVARSSW*LSIEHW
Trigger: CCAATGTTCGATACTCAGCCACCAAGACGATCTCGC...AACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACATCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp ATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAGGTGAACTGAGAGCAGCGAGATCGTCTTaGTGGCTGAGTATCGAACAT +
Preference number: 4 (lower is better)
Translates to: ILAAKVSMCRREGSGELRAARSS*WLSIEH
Trigger: ATGTTCGATACTCAGCCACCAAGACGATCTCGCTGC...TCTCAGTTCACCTGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp ATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAGGTCGTGAAGGTCTTATaGCACCAGAAGATGTTCTGC +
Preference number: 4 (lower is better)
Translates to: MSEPSWLQKSPCAEEKVQVVKVL*HQKMFC
Trigger: GCAGAACATCTTCTGGTGCCATAAGACCTTCACGAC...CTGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp ATGATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTGCACAGATGCGTCACTaGGATAATAGTAGCCCACGA +
Preference number: 4 (lower is better)
Translates to: MMSEPSWLQKSPCAEEKVAQMRH*DNSSPR
Trigger: TCGTGGGCTACTATTATCCCAGTGACGCATCTGTGC...AACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACATCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp ATGATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTTGGTCCTTGGGTTCTTaGCTAACCAACCAGAAGAGG +
Preference number: 4 (lower is better)
Translates to: MMSEPSWLQKSPCAEEKVWSLGS*LTNQKR
Trigger: CCTCTTCTGGTTGGTTAGCCAAGAACCCAAGGACCA...AACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACATCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp TCAGGGCCCAGTTTGTATGATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGATGTCAGAGCCATCTTaGCTGCAAAAGTCTCCATGT +
Preference number: 4 (lower is better)
Translates to: SGPSLYDVRAILAAKVSMMSEPS*LQKSPC
Trigger: ACATGGAGACTTTTGCAGCCAAGATGGCTCTGACAT...CATGGAGACTTTTGCAGCCAAGATGGCTCTGACATCATACAAACTGGGCCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp ATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAGGTGAACTGAGAGGGGCTATTGTGCATTaGACTTTGGTCAGCGGCTTT +
Preference number: 4 (lower is better)
Translates to: ILAAKVSMCRREGSGELRGAIVH*TLVSGF
Trigger: AAAGCCGCTGACCAAAGTCCAATGCACAATAGCCCC...TCTCAGTTCACCTGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR TCA 90 bp GGGCTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGACGCTGCTGTGTATTTTGGTTTTTATTaGACTCACTGGGCTCAAGGA +
Preference number: 4 (lower is better)
Translates to: GLLCIGLWSAAFNLDAAVYFGFY*THWAQG
Trigger: TCCTTGAGCCCAGTGAGTTCAATAAAAACCAAAATA...CACAGCAGCGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp ATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAGGTGAACTGAGACTGACAAATAGTTCTTaGTGTTCCTGGCCTCAGCTC +
Preference number: 4 (lower is better)
Translates to: ILAAKVSMCRREGSGELRLTNSS*CSWPQL
Trigger: GAGCTGAGGCCAGGAACAGCAAGAACTATTTGTCAG...TCTCAGTTCACCTGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp ATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAGCACCAGAAGATGTTCTaGATGTCATCCAGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: MSEPSWLQKSPCAEEKVQHQKMF*MSSSFF
Trigger: GAAGAAGCTGGATGACATGCAGAACATCTTCTGGTG...CTGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp TTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAGGTGAACTGAGAACATGCGTGTTGTTTTCGTaGACCAGGAACTCAGAGTTG +
Preference number: 4 (lower is better)
Translates to: LAAKVSMCRREGSGELRTCVLFS*TRNSEL
Trigger: CAACTCTGAGTTCCTGGTGCACGAAAACAACACGCA...TGTTCTCAGTTCACCTGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp GATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAGCAAAAGTCTCCATGTaGAGAAGAGAAGGTTCAGGT +
Preference number: 4 (lower is better)
Translates to: DVRAILAAKVSMCRREGSAKVSM*RREGSG
Trigger: ACCTGAACCTTCTCTTCTGCACATGGAGACTTTTGC...TGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp ATGATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCTGAGTATCGAACATTaGGCTCCATGTACATCAGGG +
Preference number: 4 (lower is better)
Translates to: MMSEPSWLQKSPCAEEKVLSIEH*APCTSG
Trigger: CCCTGATGTACATGGAGCCCAATGTTCGATACTCAG...AACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp ATGATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTAAGCTAGAGATGCAGTaGAGCATGACGGGATTGACA +
Preference number: 4 (lower is better)
Translates to: MMSEPSWLQKSPCAEEKVKLEMQ*SMTGLT
Trigger: TGTCAATCCCGTCATGCTCCACTGCATCTCTAGCTT...AACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp TTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAGGTGAACTGAGAACAGATCAGATGCTGAGATaGAGAAAAGGAGGTAACGCC +
Preference number: 4 (lower is better)
Translates to: LAAKVSMCRREGSGELRTDQMLR*RKGGNA
Trigger: GGCGTTACCTCCTTTTCTCCATCTCAGCATCTGATC...TGTTCTCAGTTCACCTGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380149.6
CDS-3UTR TCA 90 bp ATGATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTAGGGGAAGAGAGTCCTaGCAAATAGTTCTTGCTGTT +
Preference number: 4 (lower is better)
Translates to: MMSEPSWLQKSPCAEEKVRGRES*QIVLAV
Trigger: AACAGCAAGAACTATTTGTCAGGACTCTCTTCCCCT...AACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACATCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR TCA 90 bp TTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAGGTGAACTGAGAACAAGGGGAAGAGAGTCCTaGCAAATAGTTCTTGCTGTT +
Preference number: 4 (lower is better)
Translates to: LAAKVSMCRREGSGELRTRGRES*QIVLAV
Trigger: AACAGCAAGAACTATTTGTCAGGACTCTCTTCCCCT...TGTTCTCAGTTCACCTGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp TTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAGGTGAACTGAGAACACACCAGAAGATGTTCTaGATGTCATCCAGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: LAAKVSMCRREGSGELRTHQKMF*MSSSFF
Trigger: GAAGAAGCTGGATGACATGCAGAACATCTTCTGGTG...TGTTCTCAGTTCACCTGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp TTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAGGTGAACTGAGAACAATCCTGCTGCACAGATaGGTCACTGGGATAATAGTA +
Preference number: 4 (lower is better)
Translates to: LAAKVSMCRREGSGELRTILLHR*VTGIIV
Trigger: TACTATTATCCCAGTGACGCATCTGTGCAGCAGGAT...TGTTCTCAGTTCACCTGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp TATGATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTAACTGGTCCTCCTCATaGTTGGACCTTTCTTTCTTC +
Preference number: 4 (lower is better)
Translates to: YDVRAILAAKVSMCRREGNWSSS*LDLSFF
Trigger: GAAGAAAGAAAGGTCCAAGCATGAGGAGGACCAGTT...ACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACATCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp TATGATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTACCTTTCTTTCTTCTTaGGTGGTATTTGGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: YDVRAILAAKVSMCRREGTFLSS*VVFGGG
Trigger: ACCACCCCCAAATACCACCCAAGAAGAAAGAAAGGT...ACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACATCATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp ATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAGGTGAACTGAGAACCTTTCTTTCTTCTTaGGTGGTATTTGGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: ILAAKVSMCRREGSGELRTFLSS*VVFGGG
Trigger: ACCACCCCCAAATACCACCCAAGAAGAAAGAAAGGT...TCTCAGTTCACCTGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp ATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAGGTGAACTGAGAATGTCAGAGCCATCTTaGCTGCAAAAGTCTCCATGT +
Preference number: 4 (lower is better)
Translates to: ILAAKVSMCRREGSGELRMSEPS*LQKSPC
Trigger: ACATGGAGACTTTTGCAGCCAAGATGGCTCTGACAT...TCTCAGTTCACCTGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CCA 90 bp TATGATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTTGTGCATTGGACTTTaGTCAGCGGCTTTTAACCTG +
Preference number: 4 (lower is better)
Translates to: YDVRAILAAKVSMCRREGLCIGL*SAAFNL
Trigger: CAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAA...ACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACATCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp GATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAGCAATTGAAGATGATTaGAGTGAGGAACTTCACCAT +
Preference number: 4 (lower is better)
Translates to: DVRAILAAKVSMCRREGSAIEDD*SEELHH
Trigger: ATGGTGAAGTTCCTCACTGCAATCATCTTCAATTGC...TGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR TCA 90 bp GATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCATATTTTGGTTTTTATTaGACTCACTGGGCTCAAGGA +
Preference number: 4 (lower is better)
Translates to: DVRAILAAKVSMCRREGSYFGFY*THWAQG
Trigger: TCCTTGAGCCCAGTGAGTTCAATAAAAACCAAAATA...TGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR GCA 90 bp TTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAGGTGAACTGAGAACAGCAATTGAAGATGATTaGAGTGAGGAACTTCACCAT +
Preference number: 4 (lower is better)
Translates to: LAAKVSMCRREGSGELRTAIEDD*SEELHH
Trigger: ATGGTGAAGTTCCTCACTGCAATCATCTTCAATTGC...TGTTCTCAGTTCACCTGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS CCA 90 bp CCCCGCGCGGCCGGTTCCGGCGCCGCACTGTTCCAGCCTCTACTATaGTACAGTCCCTGCGTCGCAGCCTCGGCGGGGGCTCTAAGAACG +
Preference number: 5 (lower is better)
Translates to: PRAAGSGAALFQPLL*YSPCVAASAGALRT
Trigger: CGTTCTTAGAGCCCCCGCCGAGGCTGCGACGCAGGGACTGTACCATAGTAGAGGCTGGAACAGTGCGGCGCCGGAACCGGCCGCGCGGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318227.4
CDS CCA 90 bp GTACACTGCCATGATGGGAAGGAGGAAGGGATGCCCCGGCAACGCTaGCCGCAGCAGCAGCCGGCCTGGAGGAGAAGAGCGGCACGCCGG +
Preference number: 5 (lower is better)
Translates to: VHCHDGKEEGMPRQR*PQQQPAWRRRAARR
Trigger: CCGGCGTGCCGCTCTTCTCCTCCAGGCCGGCTGCTGCTGCGGCCAGCGTTGCCGGGGCATCCCTTCCTCCTTCCCATCATGGCAGTGTAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS GCA 90 bp GCCGGCCCTCAGGTAGGGACCAGTGGTCACACACAGGCGGTACACTaGCATGATGGGAAGGAGGAAGGGATGCCCCGGCAACGCTGGCCG +
Preference number: 5 (lower is better)
Translates to: AGPQVGTSGHTQAVH*HDGKEEGMPRQRWP
Trigger: CGGCCAGCGTTGCCGGGGCATCCCTTCCTCCTTCCCATCATGGCAGTGTACCGCCTGTGTGTGACCACTGGTCCCTACCTGAGGGCCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS GCA 90 bp GTCACACACAGGCGGTACACTGCCATGATGGGAAGGAGGAAGGGATaGCCCGGCAACGCTGGCCGCAGCAGCAGCCGGCCTGGAGGAGAA +
Preference number: 5 (lower is better)
Translates to: VTHRRYTAMMGRRKG*PGNAGRSSSRPGGE
Trigger: TTCTCCTCCAGGCCGGCTGCTGCTGCGGCCAGCGTTGCCGGGGCATCCCTTCCTCCTTCCCATCATGGCAGTGTACCGCCTGTGTGTGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS GCA 90 bp ACACTGCCCTCCGCCTGGTCAGCGGCCCGGACTGATGCCCTGGAGTaGTTGTCCGCCCACTCCCCAATGTCCCCCAAGATCTGTTCCTCC +
Preference number: 5 (lower is better)
Translates to: TLPSAWSAARTDALE*LSAHSPMSPKICSS
Trigger: GGAGGAACAGATCTTGGGGGACATTGGGGAGTGGGCGGACAAGCACTCCAGGGCATCAGTCCGGGCCGCTGACCAGGCGGAGGGCAGTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380149.6
CDS TCA 90 bp CCCTCAGGTAGGGACCAGTGGTCACACACAGGCGGTACACTGCCATaGTGGGAAGGAGGAAGGGATGCCCCGGCAACGCTGGCCGCAGCA +
Preference number: 5 (lower is better)
Translates to: PSGRDQWSHTGGTLP*WEGGRDAPATLAAA
Trigger: TGCTGCGGCCAGCGTTGCCGGGGCATCCCTTCCTCCTTCCCATCATGGCAGTGTACCGCCTGTGTGTGACCACTGGTCCCTACCTGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS CCA 90 bp TTGGGACACTGCCCTCCGCCTGGTCAGCGGCCCGGACTGATGCCCTaGAGTGCTTGTCCGCCCACTCCCCAATGTCCCCCAAGATCTGTT +
Preference number: 5 (lower is better)
Translates to: LGHCPPPGQRPGLMP*SACPPTPQCPPRSV
Trigger: AACAGATCTTGGGGGACATTGGGGAGTGGGCGGACAAGCACTCCAGGGCATCAGTCCGGGCCGCTGACCAGGCGGAGGGCAGTGTCCCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380149.6
CDS TCA 90 bp CTGTATAATTGGGACACTGCCCTCCGCCTGGTCAGCGGCCCGGACTaGTGCCCTGGAGTGCTTGTCCGCCCACTCCCCAATGTCCCCCAA +
Preference number: 5 (lower is better)
Translates to: LYNWDTALRLVSGPD*CPGVLVRPLPNVPQ
Trigger: TTGGGGGACATTGGGGAGTGGGCGGACAAGCACTCCAGGGCATCAGTCCGGGCCGCTGACCAGGCGGAGGGCAGTGTCCCAATTATACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380149.6
CDS GCA 90 bp GGTTCCGGCGCCGCACTGTTCCAGCCTCTACTATGGTACAGTCCCTaGGTCGCAGCCTCGGCGGGGGCTCTAAGAACGGGAGGCAGAAAA +
Preference number: 5 (lower is better)
Translates to: GSGAALFQPLLWYSP*VAASAGALRTGGRK
Trigger: TTTTCTGCCTCCCGTTCTTAGAGCCCCCGCCGAGGCTGCGACGCAGGGACTGTACCATAGTAGAGGCTGGAACAGTGCGGCGCCGGAACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318227.4
CDS GCA 90 bp GCAGGTCAGGAAAGCGAAATACAGCGCCGGCAAACAGGGTCTGAATaGCCCGCGTGGCATTCTTTCCGCTCCAGGACCGCCCTGGGCCTG +
Preference number: 5 (lower is better)
Translates to: AGQESEIQRRQTGSE*PAWHSFRSRTALGL
Trigger: CAGGCCCAGGGCGGTCCTGGAGCGGAAAGAATGCCACGCGGGGCATTCAGACCCTGTTTGCCGGCGCTGTATTTCGCTTTCCTGACCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318227.4
CDS TCA 90 bp CACAGCCGGCTTGGGAAACCTGAGCTTTCCCGGCCCAGGAACGCCTaGGCAAAAATCTCGCCAGTCCAGGCCTGCAGCTCCGAATCCTGC +
Preference number: 5 (lower is better)
Translates to: HSRLGKPELSRPRNA*AKISPVQACSSESC
Trigger: GCAGGATTCGGAGCTGCAGGCCTGGACTGGCGAGATTTTTGCTCAGGCGTTCCTGGGCCGGGAAAGCTCAGGTTTCCCAAGCCGGCTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS GCA 90 bp AGCTCTCTCTGGGATGTTCCTGGGCTTTCTCTCTCCGAAGCTCCCTaGTGGCGGCTCGGGCTTCCTCTCTCCGCCCACAGTCTTGCACTC +
Preference number: 5 (lower is better)
Translates to: SSLWDVPGLSLSEAP*WRLGLPLSAHSLAL
Trigger: GAGTGCAAGACTGTGGGCGGAGAGAGGAAGCCCGAGCCGCCAGCAGGGAGCTTCGGAGAGAGAAAGCCCAGGAACATCCCAGAGAGAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS CCA 90 bp GAAAGCGAAATACAGCGCCGGCAAACAGGGTCTGAATGCCCCGCGTaGCATTCTTTCCGCTCCAGGACCGCCCTGGGCCTGCAGGATCCT +
Preference number: 5 (lower is better)
Translates to: ESEIQRRQTGSECPA*HSFRSRTALGLQDP
Trigger: AGGATCCTGCAGGCCCAGGGCGGTCCTGGAGCGGAAAGAATGCCACGCGGGGCATTCAGACCCTGTTTGCCGGCGCTGTATTTCGCTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318227.4
CDS CCA 90 bp AGAAAAGGAGGTAACGCCTGTATAATTGGGACACTGCCCTCCGCCTaGTCAGCGGCCCGGACTGATGCCCTGGAGTGCTTGTCCGCCCAC +
Preference number: 5 (lower is better)
Translates to: RKGGNACIIGTLPSA*SAARTDALECLSAH
Trigger: GTGGGCGGACAAGCACTCCAGGGCATCAGTCCGGGCCGCTGACCAGGCGGAGGGCAGTGTCCCAATTATACAGGCGTTACCTCCTTTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380149.6
CDS CCA 90 bp TGCTTGCCTCTGACACAGCCGGTCCCTCTGGCTGGCTCACCCAGATaGATATCAGGAGCCTGGGTTCCACTGCGGAGGGAGGGATCAGAT +
Preference number: 5 (lower is better)
Translates to: CLPLTQPVPLAGSPR*ISGAWVPLRREGSD
Trigger: ATCTGATCCCTCCCTCCGCAGTGGAACCCAGGCTCCTGATATCCATCTGGGTGAGCCAGCCAGAGGGACCGGCTGTGTCAGAGGCAAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380149.6
CDS-3UTR CAA 90 bp GGTGCTAGGGACAAAGGGGACCACATGTTAGACCCAGGCACACAGTCCTTCTGTCCAGCGGTAGCATTCTaGTCGGGCCCGGAGCTCCCG +
Preference number: 5 (lower is better)
Translates to: GARDKGDHMLDPGTQSFCPAVAF*SGPELP
Trigger: CGGGAGCTCCGGGCCCGACAAGAATGCTACCGCTGG...ACAGAAGGACTGTGTGCCTGGGTCTAACATGTGGTCCCCTTTGTCCCTAGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS GCA 90 bp AGCTCCCTGCTGGCGGCTCGGGCTTCCTCTCTCCGCCCACAGTCTTaGACTCTAATACTTGTTTGCTTGCCTCTGACACAGCCGGTCCCT +
Preference number: 5 (lower is better)
Translates to: SSLLAARASSLRPQS*TLILVCLPLTQPVP
Trigger: AGGGACCGGCTGTGTCAGAGGCAAGCAAACAAGTATTAGAGTGCAAGACTGTGGGCGGAGAGAGGAAGCCCGAGCCGCCAGCAGGGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS GCA 90 bp TGTACCGATCCAGGGGCGAAGTCCCTGCCCATTCGATCTAGCCGCTaGTTGGGGCTTTCACCACACGTGCCCACCAGTGTGACAGAGATG +
Preference number: 5 (lower is better)
Translates to: CTDPGAKSLPIRSSR*LGLSPHVPTSVTEM
Trigger: CATCTCTGTCACACTGGTGGGCACGTGTGGTGAAAGCCCCAAGCAGCGGCTAGATCGAATGGGCAGGGACTTCGCCCCTGGATCGGTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS GCA 90 bp GGCAGCTGGCGCAGCGTGGCCATGGCGAAGGCCTCGCACAGCAAATaGGTGCACAGAAAGTGCGTGTTGTTTTCGTGCACCAGGAACTCA +
Preference number: 5 (lower is better)
Translates to: GSWRSVAMAKASHSK*VHRKCVLFSCTRNS
Trigger: TGAGTTCCTGGTGCACGAAAACAACACGCACTTTCTGTGCACGCATTTGCTGTGCGAGGCCTTCGCCATGGCCACGCTGCGCCAGCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CAA 90 bp CAAGCTGGGCATTCCAAGAGGCTGGAACAAGAGGCTGCCCCAAGTGGGGCAAGACGATCTAGCCGCTGCTaGGGGCTTTCACCACACGTG +
Preference number: 5 (lower is better)
Translates to: QAGHSKRLEQEAAPSGARRSSRC*GLSPHV
Trigger: CACGTGTGGTGAAAGCCCCAAGCAGCGGCTAGATCG...TCTTGCCCCACTTGGGGCAGCCTCTTGTTCCAGCCTCTTGGAATGCCCAGCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CAA 90 bp GGCTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGACGCTGCTGTGCCCAGCGGTAGCATTCTaGTCGGGCCCGGAGCTCCCG +
Preference number: 5 (lower is better)
Translates to: GYCALDFGQRLLTWTLLCPAVAF*SGPELP
Trigger: CGGGAGCTCCGGGCCCGACAAGAATGCTACCGCTGG...GCACAGCAGCGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CAA 90 bp TCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAGGTGACGAGGCCCTCGGGGTaGAGCAGCGTGGCCCTCGCG +
Preference number: 5 (lower is better)
Translates to: SEPSWLQKSPCAEEKVQVTRPSG*SSVALA
Trigger: CGCGAGGGCCACGCTGCTCAACCCCGAGGGCCTCGT...CACCTGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CAA 90 bp AAGCTGGGCATTCCAAGAGGCTGGAACAAGAGGCTGCCCCAAGTGGGGCAAGAAGGGTGCACAGCCGGCTaGGGAAACCTGAGCTTTCCC +
Preference number: 5 (lower is better)
Translates to: KLGIPRGWNKRLPQVGQEGCTAG*GNLSFP
Trigger: GGGAAAGCTCAGGTTTCCCAAGCCGGCTGTGCACCC...TTCTTGCCCCACTTGGGGCAGCCTCTTGTTCCAGCCTCTTGGAATGCCCAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS GCA 90 bp CGGGCTTCCTCTCTCCGCCCACAGTCTTGCACTCTAATACTTGTTTaGTTGCCTCTGACACAGCCGGTCCCTCTGGCTGGCTCACCCAGA +
Preference number: 5 (lower is better)
Translates to: RASSLRPQSCTLILV*LPLTQPVPLAGSPR
Trigger: TCTGGGTGAGCCAGCCAGAGGGACCGGCTGTGTCAGAGGCAAGCAAACAAGTATTAGAGTGCAAGACTGTGGGCGGAGAGAGGAAGCCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS GCA 90 bp GCTGGCGCAGCGTGGCCATGGCGAAGGCCTCGCACAGCAAATGCGTaGACAGAAAGTGCGTGTTGTTTTCGTGCACCAGGAACTCAGAGT +
Preference number: 5 (lower is better)
Translates to: AGAAWPWRRPRTANA*TESACCFRAPGTQS
Trigger: ACTCTGAGTTCCTGGTGCACGAAAACAACACGCACTTTCTGTGCACGCATTTGCTGTGCGAGGCCTTCGCCATGGCCACGCTGCGCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CAA 90 bp CTCACAGCTCAGGGCCCAGTTTGTATGATGTCAGAGCCATCTTGGCTGCAAAAGCCAGCGGTAGCATTCTaGTCGGGCCCGGAGCTCCCG +
Preference number: 5 (lower is better)
Translates to: LTAQGPVCMMSEPSWLQKPAVAF*SGPELP
Trigger: CGGGAGCTCCGGGCCCGACAAGAATGCTACCGCTGG...CTTTTGCAGCCAAGATGGCTCTGACATCATACAAACTGGGCCCTGAGCTGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CAA 90 bp ATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAGACGAGGCCCTCGGGGTaGAGCAGCGTGGCCCTCGCG +
Preference number: 5 (lower is better)
Translates to: MSEPSWLQKSPCAEEKVQTRPSG*SSVALA
Trigger: CGCGAGGGCCACGCTGCTCAACCCCGAGGGCCTCGT...CTGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS GCA 90 bp GTGGCCATGGCGAAGGCCTCGCACAGCAAATGCGTGCACAGAAAGTaGGTGTTGTTTTCGTGCACCAGGAACTCAGAGTTGCGCACCCAC +
Preference number: 5 (lower is better)
Translates to: VAMAKASHSKCVHRK*VLFSCTRNSELRTH
Trigger: GTGGGTGCGCAACTCTGAGTTCCTGGTGCACGAAAACAACACGCACTTTCTGTGCACGCATTTGCTGTGCGAGGCCTTCGCCATGGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS CCA 90 bp TGCTTGCCTCTGACACAGCCGGTCCCTCTGGCTGGCTCACCCAGATaGATATCAGGAGCCTGGGTTCCACTCATTCTCTGCTCTGGAGTA +
Preference number: 5 (lower is better)
Translates to: CLPLTQPVPLAGSPR*ISGAWVPLILCSGV
Trigger: TACTCCAGAGCAGAGAATGAGTGGAACCCAGGCTCCTGATATCCATCTGGGTGAGCCAGCCAGAGGGACCGGCTGTGTCAGAGGCAAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318227.4
CDS-3UTR CAA 90 bp GGTGCTAGGGACAAAGGGGACCACATGTTAGACCCAGGCACACAGTCCTTCTGTCGATCTAGCCGCTGCTaGGGGCTTTCACCACACGTG +
Preference number: 5 (lower is better)
Translates to: GARDKGDHMLDPGTQSFCRSSRC*GLSPHV
Trigger: CACGTGTGGTGAAAGCCCCAAGCAGCGGCTAGATCG...ACAGAAGGACTGTGTGCCTGGGTCTAACATGTGGTCCCCTTTGTCCCTAGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CAA 90 bp TATGATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTACGAGGCCCTCGGGGTaGAGCAGCGTGGCCCTCGCG +
Preference number: 5 (lower is better)
Translates to: YDVRAILAAKVSMCRREGTRPSG*SSVALA
Trigger: CGCGAGGGCCACGCTGCTCAACCCCGAGGGCCTCGT...ACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACATCATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS CCA 90 bp TCTAATACTTGTTTGCTTGCCTCTGACACAGCCGGTCCCTCTGGCTaGCTCACCCAGATGGATATCAGGAGCCTGGGTTCCACTGCGGAG +
Preference number: 5 (lower is better)
Translates to: SNTCLLASDTAGPSG*LTQMDIRSLGSTAE
Trigger: CTCCGCAGTGGAACCCAGGCTCCTGATATCCATCTGGGTGAGCCAGCCAGAGGGACCGGCTGTGTCAGAGGCAAGCAAACAAGTATTAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380149.6
CDS-3UTR CAA 90 bp AGTGAAGCGGTTCCTTCCTTTCGGAGGGGCTATTGTGCATTGGACTTTGGTCAGGGGTGCACAGCCGGCTaGGGAAACCTGAGCTTTCCC +
Preference number: 5 (lower is better)
Translates to: SEAVPSFRRGYCALDFGQGCTAG*GNLSFP
Trigger: GGGAAAGCTCAGGTTTCCCAAGCCGGCTGTGCACCC...CTGACCAAAGTCCAATGCACAATAGCCCCTCCGAAAGGAAGGAACCGCTTCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CAA 90 bp GGGCTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGACGCTGCTGTGTCATGCTGCCCACTGTaGACAGCAGCGTGCTGGGCA +
Preference number: 5 (lower is better)
Translates to: GLLCIGLWSAAFNLDAAVSCCPL*TAACWA
Trigger: TGCCCAGCACGCTGCTGTCAACAGTGGGCAGCATGA...CACAGCAGCGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CAA 90 bp GAAACCCAAGCTGGGCATTCCAAGAGGCTGGAACAAGAGGCTGCCCCAAGTGGGCTGGTCCTTGGGTTCTaGGCTAACCAACCAGAAGAG +
Preference number: 5 (lower is better)
Translates to: ETQAGHSKRLEQEAAPSGLVLGF*ANQPEE
Trigger: CTCTTCTGGTTGGTTAGCCAAGAACCCAAGGACCAG...CCCACTTGGGGCAGCCTCTTGTTCCAGCCTCTTGGAATGCCCAGCTTGGGTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CAA 90 bp GTCTCTCACAGCTCAGGGCCCAGTTTGTATGATGTCAGAGCCATCTTGGCTGCAAGTGTGACAGAGATGTaGTCCAGTGTGCCGGCCCTC +
Preference number: 5 (lower is better)
Translates to: VSHSSGPSLYDVRAILAASVTEM*SSVPAL
Trigger: GAGGGCCGGCACACTGGACAACATCTCTGTCACACT...TGCAGCCAAGATGGCTCTGACATCATACAAACTGGGCCCTGAGCTGTGAGAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CAA 90 bp TTTCGGAGGGGCTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGACGGGGGCCACCATGTCATaGGTGACAGGCAGCTTGCTG +
Preference number: 5 (lower is better)
Translates to: FRRGYCALDFGQRLLTWTGATMS*VTGSLL
Trigger: CAGCAAGCTGCCTGTCACCAATGACATGGTGGCCCC...CGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCCCCTCCGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CAA 90 bp CTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGACGCTGCTGTGCTGGAGGTAGATGAGGCCTaGCCTCCCGATGGACGTGAC +
Preference number: 5 (lower is better)
Translates to: LLCIGLWSAAFNLDAAVLEVDEA*PPDGRD
Trigger: GTCACGTCCATCGGGAGGCAAGGCCTCATCTACCTC...CAGCACAGCAGCGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CAA 90 bp TTTCGGAGGGGCTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGACGGAGGTAGATGAGGCCTaGCCTCCCGATGGACGTGAC +
Preference number: 5 (lower is better)
Translates to: FRRGYCALDFGQRLLTWTEVDEA*PPDGRD
Trigger: GTCACGTCCATCGGGAGGCAAGGCCTCATCTACCTC...CGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCCCCTCCGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CAA 90 bp TTTCGGAGGGGCTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGACGTCATGCTGCCCACTGTaGACAGCAGCGTGCTGGGCA +
Preference number: 5 (lower is better)
Translates to: FRRGYCALDFGQRLLTWTSCCPL*TAACWA
Trigger: TGCCCAGCACGCTGCTGTCAACAGTGGGCAGCATGA...CGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCCCCTCCGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CAA 90 bp AGTGAAGCGGTTCCTTCCTTTCGGAGGGGCTATTGTGCATTGGACTTTGGTCAGTCATGCTGCCCACTGTaGACAGCAGCGTGCTGGGCA +
Preference number: 5 (lower is better)
Translates to: SEAVPSFRRGYCALDFGQSCCPL*TAACWA
Trigger: TGCCCAGCACGCTGCTGTCAACAGTGGGCAGCATGA...CTGACCAAAGTCCAATGCACAATAGCCCCTCCGAAAGGAAGGAACCGCTTCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CAA 90 bp GGGCTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGACGCTGCTGTGAGGGGCCTCTGGTCCTaGGGTTCTTGGCTAACCAAC +
Preference number: 5 (lower is better)
Translates to: GLLCIGLWSAAFNLDAAVRGLWS*GSWLTN
Trigger: GTTGGTTAGCCAAGAACCCAAGGACCAGAGGCCCCT...CACAGCAGCGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS TCA 90 bp GGACGCAGGGATGGCATTGAAGAGCAGCGAGATCGTCTTGGTGGCTaGGTATCGAACATTGGGCTCCATGTACATCAGGGATGGGATGTC +
Preference number: 5 (lower is better)
Translates to: GRRDGIEEQRDRLGG*VSNIGLHVHQGWDV
Trigger: GACATCCCATCCCTGATGTACATGGAGCCCAATGTTCGATACTCAGCCACCAAGACGATCTCGCTGCTCTTCAATGCCATCCCTGCGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS GCA 90 bp ACCAGAAGATGTTCTGCATGTCATCCAGCTTCTTCCAGGAGCCCTTaGGATCCAACAGCCCTCGAAGCTTCATTCCCAAGGACGCAGGGA +
Preference number: 5 (lower is better)
Translates to: TRRCSACHPASSRSP*DPTALEASFPRTQG
Trigger: TCCCTGCGTCCTTGGGAATGAAGCTTCGAGGGCTGTTGGATCGCAAGGGCTCCTGGAAGAAGCTGGATGACATGCAGAACATCTTCTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS CCA 90 bp GAACATTGGGCTCCATGTACATCAGGGATGGGATGTCAATTTTCATaGGGAAGCCGGGCAGGTACCGATTCCCACTGCTGTCACCCTGGT +
Preference number: 5 (lower is better)
Translates to: EHWAPCTSGMGCQFS*GSRAGTDSHCCHPG
Trigger: ACCAGGGTGACAGCAGTGGGAATCGGTACCTGCCCGGCTTCCCCATGAAAATTGACATCCCATCCCTGATGTACATGGAGCCCAATGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS CCA 90 bp TCTAATACTTGTTTGCTTGCCTCTGACACAGCCGGTCCCTCTGGCTaGCTCACCCAGATGGATATCAGGAGCCTGGGTTCCACTGCATTC +
Preference number: 5 (lower is better)
Translates to: SNTCLLASDTAGPSG*LTQMDIRSLGSTAF
Trigger: GAATGCAGTGGAACCCAGGCTCCTGATATCCATCTGGGTGAGCCAGCCAGAGGGACCGGCTGTGTCAGAGGCAAGCAAACAAGTATTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448843.7
CDS-3UTR CAA 90 bp GATGAGGGAGAAAAGCTCAGAAACCCAAGCTGGGCATTCCAAGAGGCTGGAACAAGTGTGACAGAGATGTaGTCCAGTGTGCCGGCCCTC +
Preference number: 5 (lower is better)
Translates to: DEGEKLRNPSWAFQEAGTSVTEM*SSVPAL
Trigger: GAGGGCCGGCACACTGGACAACATCTCTGTCACACT...TGTTCCAGCCTCTTGGAATGCCCAGCTTGGGTTTCTGAGCTTTTCTCCCTCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CAA 90 bp TCCTTTCGGAGGGGCTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGTTCTTCCAGGAGCCCTaGCGATCCAACAGCCCTCGA +
Preference number: 5 (lower is better)
Translates to: SFRRGYCALDFGQRLLTWFFQEP*RSNSPR
Trigger: TCGAGGGCTGTTGGATCGCAAGGGCTCCTGGAAGAA...CCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCCCCTCCGAAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CAA 90 bp GGGCTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGACGCTGCTGTGTTGGTGACAGGCAGCTaGCTGGGCAAGCTAGAGATG +
Preference number: 5 (lower is better)
Translates to: GLLCIGLWSAAFNLDAAVLVTGS*LGKLEM
Trigger: CATCTCTAGCTTGCCCAGCAAGCTGCCTGTCACCAA...CACAGCAGCGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CAA 90 bp TCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAGGTGGGGGCCACCATGTCATaGGTGACAGGCAGCTTGCTG +
Preference number: 5 (lower is better)
Translates to: SEPSWLQKSPCAEEKVQVGATMS*VTGSLL
Trigger: CAGCAAGCTGCCTGTCACCAATGACATGGTGGCCCC...CACCTGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CAA 90 bp GATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAGGGTGCACAGCCGGCTaGGGAAACCTGAGCTTTCCC +
Preference number: 5 (lower is better)
Translates to: DVRAILAAKVSMCRREGSGCTAG*GNLSFP
Trigger: GGGAAAGCTCAGGTTTCCCAAGCCGGCTGTGCACCC...TGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS TCA 90 bp TCCACTGATAGCAGGGGAAGTGGGATACACTACCATCCGGTTCGGTaGCACAGATGCGGCTACAGTACCAAGAGTCCTTGCGGAAGAAAG +
Preference number: 5 (lower is better)
Translates to: STDSRGSGIHYHPVR*HRCGYSTKSPCGRK
Trigger: CTTTCTTCCGCAAGGACTCTTGGTACTGTAGCCGCATCTGTGTCACCGAACCGGATGGTAGTGTATCCCACTTCCCCTGCTATCAGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS CCA 90 bp TCTAATACTTGTTTGCTTGCCTCTGACACAGCCGGTCCCTCTGGCTaGCTCACCCAGATGGATATCAGGAGCCTGGGTTCCACTCATTCT +
Preference number: 5 (lower is better)
Translates to: SNTCLLASDTAGPSG*LTQMDIRSLGSTHS
Trigger: AGAATGAGTGGAACCCAGGCTCCTGATATCCATCTGGGTGAGCCAGCCAGAGGGACCGGCTGTGTCAGAGGCAAGCAAACAAGTATTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318227.4
CDS-3UTR CAA 90 bp ATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAGCGATCTAGCCGCTGCTaGGGGCTTTCACCACACGTG +
Preference number: 5 (lower is better)
Translates to: MSEPSWLQKSPCAEEKVQRSSRC*GLSPHV
Trigger: CACGTGTGGTGAAAGCCCCAAGCAGCGGCTAGATCG...CTGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CAA 90 bp TCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAGGTGGACGCAGGGATGGCATaGAAGAGCAGCGAGATCGTC +
Preference number: 5 (lower is better)
Translates to: SEPSWLQKSPCAEEKVQVDAGMA*KSSEIV
Trigger: GACGATCTCGCTGCTCTTCAATGCCATCCCTGCGTC...CACCTGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CAA 90 bp TCTCACAGCTCAGGGCCCAGTTTGTATGATGTCAGAGCCATCTTGGCTGCAAAAGACGCAGGGATGGCATaGAAGAGCAGCGAGATCGTC +
Preference number: 5 (lower is better)
Translates to: SHSSGPSLYDVRAILAAKDAGMA*KSSEIV
Trigger: GACGATCTCGCTGCTCTTCAATGCCATCCCTGCGTC...TTTTGCAGCCAAGATGGCTCTGACATCATACAAACTGGGCCCTGAGCTGTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CAA 90 bp TCCTTCCTTTCGGAGGGGCTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACTTCTTCCAGGAGCCCTaGCGATCCAACAGCCCTCGA +
Preference number: 5 (lower is better)
Translates to: SFLSEGLLCIGLWSAAFNFFQEP*RSNSPR
Trigger: TCGAGGGCTGTTGGATCGCAAGGGCTCCTGGAAGAA...GTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCCCCTCCGAAAGGAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CAA 90 bp GGTGCTAGGGACAAAGGGGACCACATGTTAGACCCAGGCACACAGTCCTTCTGTTGCTGGGCAGAGCAATaGAAGATGATTGCAGTGAGG +
Preference number: 5 (lower is better)
Translates to: GARDKGDHMLDPGTQSFCCWAEQ*KMIAVR
Trigger: CCTCACTGCAATCATCTTCAATTGCTCTGCCCAGCA...ACAGAAGGACTGTGTGCCTGGGTCTAACATGTGGTCCCCTTTGTCCCTAGCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CAA 90 bp TCTCACAGCTCAGGGCCCAGTTTGTATGATGTCAGAGCCATCTTGGCTGCAAAAAGGGGCCTCTGGTCCTaGGGTTCTTGGCTAACCAAC +
Preference number: 5 (lower is better)
Translates to: SHSSGPSLYDVRAILAAKRGLWS*GSWLTN
Trigger: GTTGGTTAGCCAAGAACCCAAGGACCAGAGGCCCCT...TTTTGCAGCCAAGATGGCTCTGACATCATACAAACTGGGCCCTGAGCTGTGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CAA 90 bp GGTGCTAGGGACAAAGGGGACCACATGTTAGACCCAGGCACACAGTCCTTCTGTCTTCTTGGGTGGTATTaGGGGGTGGTTAGATGGAGA +
Preference number: 5 (lower is better)
Translates to: GARDKGDHMLDPGTQSFCLLGWY*GVVRWR
Trigger: TCTCCATCTAACCACCCCCAAATACCACCCAAGAAG...ACAGAAGGACTGTGTGCCTGGGTCTAACATGTGGTCCCCTTTGTCCCTAGCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CAA 90 bp GGTGCTAGGGACAAAGGGGACCACATGTTAGACCCAGGCACACAGTCCTTCTGTGATGTCAGAGCCATCTaGGCTGCAAAAGTCTCCATG +
Preference number: 5 (lower is better)
Translates to: GARDKGDHMLDPGTQSFCDVRAI*AAKVSM
Trigger: CATGGAGACTTTTGCAGCCAAGATGGCTCTGACATC...ACAGAAGGACTGTGTGCCTGGGTCTAACATGTGGTCCCCTTTGTCCCTAGCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CAA 90 bp GGGCTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGACGCTGCTGTGAGCTCAGGGCCCAGTTaGTATGATGTCAGAGCCATC +
Preference number: 5 (lower is better)
Translates to: GLLCIGLWSAAFNLDAAVSSGPS*YDVRAI
Trigger: GATGGCTCTGACATCATACAAACTGGGCCCTGAGCT...CACAGCAGCGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CAA 90 bp GGGCTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGACGCTGCTGTGGCTGAGTATCGAACATaGGGCTCCATGTACATCAGG +
Preference number: 5 (lower is better)
Translates to: GLLCIGLWSAAFNLDAAVAEYRT*GSMYIR
Trigger: CCTGATGTACATGGAGCCCAATGTTCGATACTCAGC...CACAGCAGCGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CAA 90 bp CTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGACGCTGCTGTGCTGAGCAGCGAGATCGTCTaGGTGGCTGAGTATCGAACA +
Preference number: 5 (lower is better)
Translates to: LLCIGLWSAAFNLDAAVLSSEIV*VAEYRT
Trigger: TGTTCGATACTCAGCCACCAAGACGATCTCGCTGCT...CAGCACAGCAGCGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CAA 90 bp TCCTTTCGGAGGGGCTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGAGCAGCGAGATCGTCTaGGTGGCTGAGTATCGAACA +
Preference number: 5 (lower is better)
Translates to: SFRRGYCALDFGQRLLTWSSEIV*VAEYRT
Trigger: TGTTCGATACTCAGCCACCAAGACGATCTCGCTGCT...CCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCCCCTCCGAAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CAA 90 bp AGTGAAGCGGTTCCTTCCTTTCGGAGGGGCTATTGTGCATTGGACTTTGGTCAGTGGAGCATGACGGGATaGACACCATTCAGGTACTGG +
Preference number: 5 (lower is better)
Translates to: SEAVPSFRRGYCALDFGQWSMTG*TPFRYW
Trigger: CCAGTACCTGAATGGTGTCAATCCCGTCATGCTCCA...CTGACCAAAGTCCAATGCACAATAGCCCCTCCGAAAGGAAGGAACCGCTTCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CAA 90 bp TCTCACAGCTCAGGGCCCAGTTTGTATGATGTCAGAGCCATCTTGGCTGCAAAATTGGTGACAGGCAGCTaGCTGGGCAAGCTAGAGATG +
Preference number: 5 (lower is better)
Translates to: SHSSGPSLYDVRAILAAKLVTGS*LGKLEM
Trigger: CATCTCTAGCTTGCCCAGCAAGCTGCCTGTCACCAA...TTTTGCAGCCAAGATGGCTCTGACATCATACAAACTGGGCCCTGAGCTGTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CAA 90 bp ATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAGGTGAACTGAGAGGGGCCACCATGTCATaGGTGACAGGCAGCTTGCTG +
Preference number: 5 (lower is better)
Translates to: ILAAKVSMCRREGSGELRGATMS*VTGSLL
Trigger: CAGCAAGCTGCCTGTCACCAATGACATGGTGGCCCC...TCTCAGTTCACCTGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CAA 90 bp GTCTCTCACAGCTCAGGGCCCAGTTTGTATGATGTCAGAGCCATCTTGGCTGCACACAGAAAGTGCGTGTaGTTTTCGTGCACCAGGAAC +
Preference number: 5 (lower is better)
Translates to: VSHSSGPSLYDVRAILAAHRKCV*FSCTRN
Trigger: GTTCCTGGTGCACGAAAACAACACGCACTTTCTGTG...TGCAGCCAAGATGGCTCTGACATCATACAAACTGGGCCCTGAGCTGTGAGAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CAA 90 bp TATGATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTGAGGTAGATGAGGCCTaGCCTCCCGATGGACGTGAC +
Preference number: 5 (lower is better)
Translates to: YDVRAILAAKVSMCRREGEVDEA*PPDGRD
Trigger: GTCACGTCCATCGGGAGGCAAGGCCTCATCTACCTC...ACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACATCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CAA 90 bp GGGCTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGACGCTGCTGTGGACCTTTCTTTCTTCTaGGGTGGTATTTGGGGGTGG +
Preference number: 5 (lower is better)
Translates to: GLLCIGLWSAAFNLDAAVDLSFF*GGIWGW
Trigger: CCACCCCCAAATACCACCCAAGAAGAAAGAAAGGTC...CACAGCAGCGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CAA 90 bp TCCTTTCGGAGGGGCTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGAGGGGCTATTGTGCATaGGACTTTGGTCAGCGGCTT +
Preference number: 5 (lower is better)
Translates to: SFRRGYCALDFGQRLLTWRGYCA*DFGQRL
Trigger: AAGCCGCTGACCAAAGTCCAATGCACAATAGCCCCT...CCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCCCCTCCGAAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CAA 90 bp GGCTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGACGCTGCTGTGCCTTTCGGAGGGGCTATaGTGCATTGGACTTTGGTCA +
Preference number: 5 (lower is better)
Translates to: GYCALDFGQRLLTWTLLCLSEGL*CIGLWS
Trigger: TGACCAAAGTCCAATGCACAATAGCCCCTCCGAAAG...GCACAGCAGCGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CAA 90 bp AAGCTGGGCATTCCAAGAGGCTGGAACAAGAGGCTGCCCCAAGTGGGGCAAGAAGGGATGAAAGGGGAGTaGGATGAAATCTTTGGAGAA +
Preference number: 5 (lower is better)
Translates to: KLGIPRGWNKRLPQVGQEGMKGE*DEIFGE
Trigger: TTCTCCAAAGATTTCATCCAACTCCCCTTTCATCCC...TTCTTGCCCCACTTGGGGCAGCCTCTTGTTCCAGCCTCTTGGAATGCCCAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CAA 90 bp CTCACAGCTCAGGGCCCAGTTTGTATGATGTCAGAGCCATCTTGGCTGCAAAAGCTAATACTTGTTTGCTaGCCTCTGACACAGCCGGTC +
Preference number: 5 (lower is better)
Translates to: LTAQGPVCMMSEPSWLQKLILVC*PLTQPV
Trigger: GACCGGCTGTGTCAGAGGCAAGCAAACAAGTATTAG...CTTTTGCAGCCAAGATGGCTCTGACATCATACAAACTGGGCCCTGAGCTGTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CAA 90 bp GTCTCTCACAGCTCAGGGCCCAGTTTGTATGATGTCAGAGCCATCTTGGCTGCATCTCCGCCCACAGTCTaGCACTCTAATACTTGTTTG +
Preference number: 5 (lower is better)
Translates to: VSHSSGPSLYDVRAILAASPPTV*HSNTCL
Trigger: CAAACAAGTATTAGAGTGCAAGACTGTGGGCGGAGA...TGCAGCCAAGATGGCTCTGACATCATACAAACTGGGCCCTGAGCTGTGAGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CAA 90 bp TTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAGGTGAACTGAGAACAAGTGTGACAGAGATGTaGTCCAGTGTGCCGGCCCTC +
Preference number: 5 (lower is better)
Translates to: LAAKVSMCRREGSGELRTSVTEM*SSVPAL
Trigger: GAGGGCCGGCACACTGGACAACATCTCTGTCACACT...TGTTCTCAGTTCACCTGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CAA 90 bp TTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAGGTGAACTGAGAACAGACGCAGGGATGGCATaGAAGAGCAGCGAGATCGTC +
Preference number: 5 (lower is better)
Translates to: LAAKVSMCRREGSGELRTDAGMA*KSSEIV
Trigger: GACGATCTCGCTGCTCTTCAATGCCATCCCTGCGTC...TGTTCTCAGTTCACCTGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CAA 90 bp ATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAGGTGAACTGAGATTCTTCCAGGAGCCCTaGCGATCCAACAGCCCTCGA +
Preference number: 5 (lower is better)
Translates to: ILAAKVSMCRREGSGELRFFQEP*RSNSPR
Trigger: TCGAGGGCTGTTGGATCGCAAGGGCTCCTGGAAGAA...TCTCAGTTCACCTGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CAA 90 bp TTTCGGAGGGGCTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGACGCACAGAAAGTGCGTGTaGTTTTCGTGCACCAGGAAC +
Preference number: 5 (lower is better)
Translates to: FRRGYCALDFGQRLLTWTHRKCV*FSCTRN
Trigger: GTTCCTGGTGCACGAAAACAACACGCACTTTCTGTG...CGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCCCCTCCGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CAA 90 bp CTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACCTGGACGCTGCTGTGCTGTGCTGGGCAGAGCAATaGAAGATGATTGCAGTGAGG +
Preference number: 5 (lower is better)
Translates to: LLCIGLWSAAFNLDAAVLCWAEQ*KMIAVR
Trigger: CCTCACTGCAATCATCTTCAATTGCTCTGCCCAGCA...CAGCACAGCAGCGTCCAGGTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CAA 90 bp TCTCACAGCTCAGGGCCCAGTTTGTATGATGTCAGAGCCATCTTGGCTGCAAAAAGCTCAGGGCCCAGTTaGTATGATGTCAGAGCCATC +
Preference number: 5 (lower is better)
Translates to: SHSSGPSLYDVRAILAAKSSGPS*YDVRAI
Trigger: GATGGCTCTGACATCATACAAACTGGGCCCTGAGCT...TTTTGCAGCCAAGATGGCTCTGACATCATACAAACTGGGCCCTGAGCTGTGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CAA 90 bp TCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAGGTGAGGGGCTATTGTGCATaGGACTTTGGTCAGCGGCTT +
Preference number: 5 (lower is better)
Translates to: SEPSWLQKSPCAEEKVQVRGYCA*DFGQRL
Trigger: AAGCCGCTGACCAAAGTCCAATGCACAATAGCCCCT...CACCTGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS TCA 90 bp TTGTCAAGGCAAATTTCTTGTCTGACTCCATCTCCTGAAAGCTGTTaGCGTCTACCATGCAGGGGAAGCCAGGGGCATAGATCTTCCAGC +
Preference number: 5 (lower is better)
Translates to: LSRQISCLTPSPESC*RLPCRGSQGHRSSS
Trigger: GCTGGAAGATCTATGCCCCTGGCTTCCCCTGCATGGTAGACGTCAACAGCTTTCAGGAGATGGAGTCAGACAAGAAATTTGCCTTGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS GCA 90 bp GTGACATACTTTGTCGTGAAGGTCTTATGGCACCAGAAGATGTTCTaGATGTCATCCAGCTTCTTCCAGGAGCCCTTGCGATCCAACAGC +
Preference number: 5 (lower is better)
Translates to: VTYFVVKVLWHQKMF*MSSSFFQEPLRSNS
Trigger: GCTGTTGGATCGCAAGGGCTCCTGGAAGAAGCTGGATGACATGCAGAACATCTTCTGGTGCCATAAGACCTTCACGACAAAGTATGTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CAA 90 bp CTCACAGCTCAGGGCCCAGTTTGTATGATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCGCCCACAGTCTaGCACTCTAATACTTGTTTG +
Preference number: 5 (lower is better)
Translates to: LTAQGPVCMMSEPSWLQKSPPTV*HSNTCL
Trigger: CAAACAAGTATTAGAGTGCAAGACTGTGGGCGGAGA...CTTTTGCAGCCAAGATGGCTCTGACATCATACAAACTGGGCCCTGAGCTGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CAA 90 bp AAGCTGGGCATTCCAAGAGGCTGGAACAAGAGGCTGCCCCAAGTGGGGCAAGAACACAAGTTGTCGTCTTaGTCAAGGCAAATTTCTTGT +
Preference number: 5 (lower is better)
Translates to: KLGIPRGWNKRLPQVGQEHKLSS*SRQISC
Trigger: ACAAGAAATTTGCCTTGACAAAGACGACAACTTGTG...TTCTTGCCCCACTTGGGGCAGCCTCTTGTTCCAGCCTCTTGGAATGCCCAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CAA 90 bp TATGATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTTGGTGACAGGCAGCTaGCTGGGCAAGCTAGAGATG +
Preference number: 5 (lower is better)
Translates to: YDVRAILAAKVSMCRREGLVTGS*LGKLEM
Trigger: CATCTCTAGCTTGCCCAGCAAGCTGCCTGTCACCAA...ACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACATCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CAA 90 bp TCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAGGTGCACAGAAAGTGCGTGTaGTTTTCGTGCACCAGGAAC +
Preference number: 5 (lower is better)
Translates to: SEPSWLQKSPCAEEKVQVHRKCV*FSCTRN
Trigger: GTTCCTGGTGCACGAAAACAACACGCACTTTCTGTG...CACCTGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CAA 90 bp ATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAGCTGGTCCTTGGGTTCTaGGCTAACCAACCAGAAGAG +
Preference number: 5 (lower is better)
Translates to: MSEPSWLQKSPCAEEKVQLVLGF*ANQPEE
Trigger: CTCTTCTGGTTGGTTAGCCAAGAACCCAAGGACCAG...CTGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CAA 90 bp TCCTTCCTTTCGGAGGGGCTATTGTGCATTGGACTTTGGTCAGCGGCTTTTAACGACCTTTCTTTCTTCTaGGGTGGTATTTGGGGGTGG +
Preference number: 5 (lower is better)
Translates to: SFLSEGLLCIGLWSAAFNDLSFF*GGIWGW
Trigger: CCACCCCCAAATACCACCCAAGAAGAAAGAAAGGTC...GTTAAAAGCCGCTGACCAAAGTCCAATGCACAATAGCCCCTCCGAAAGGAAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CAA 90 bp GATGAGGGAGAAAAGCTCAGAAACCCAAGCTGGGCATTCCAAGAGGCTGGAACATGGTCCTCCTCATGCTaGGACCTTTCTTTCTTCTTG +
Preference number: 5 (lower is better)
Translates to: DEGEKLRNPSWAFQEAGTWSSSC*DLSFFL
Trigger: CAAGAAGAAAGAAAGGTCCAAGCATGAGGAGGACCA...TGTTCCAGCCTCTTGGAATGCCCAGCTTGGGTTTCTGAGCTTTTCTCCCTCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CAA 90 bp TCAGGGCCCAGTTTGTATGATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGCTTTCGGAGGGGCTATaGTGCATTGGACTTTGGTCA +
Preference number: 5 (lower is better)
Translates to: SGPSLYDVRAILAAKVSMLSEGL*CIGLWS
Trigger: TGACCAAAGTCCAATGCACAATAGCCCCTCCGAAAG...CATGGAGACTTTTGCAGCCAAGATGGCTCTGACATCATACAAACTGGGCCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CAA 90 bp GATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCACTAATACTTGTTTGCTaGCCTCTGACACAGCCGGTC +
Preference number: 5 (lower is better)
Translates to: DVRAILAAKVSMCRREGSLILVC*PLTQPV
Trigger: GACCGGCTGTGTCAGAGGCAAGCAAACAAGTATTAG...TGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CAA 90 bp ATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAGCTAATACTTGTTTGCTaGCCTCTGACACAGCCGGTC +
Preference number: 5 (lower is better)
Translates to: MSEPSWLQKSPCAEEKVQLILVC*PLTQPV
Trigger: GACCGGCTGTGTCAGAGGCAAGCAAACAAGTATTAG...CTGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CAA 90 bp ATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAGGTGAACTGAGAAGCAGCGAGATCGTCTaGGTGGCTGAGTATCGAACA +
Preference number: 5 (lower is better)
Translates to: ILAAKVSMCRREGSGELRSSEIV*VAEYRT
Trigger: TGTTCGATACTCAGCCACCAAGACGATCTCGCTGCT...TCTCAGTTCACCTGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CAA 90 bp TATGATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTGGAGCATGACGGGATaGACACCATTCAGGTACTGG +
Preference number: 5 (lower is better)
Translates to: YDVRAILAAKVSMCRREGWSMTG*TPFRYW
Trigger: CCAGTACCTGAATGGTGTCAATCCCGTCATGCTCCA...ACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACATCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CAA 90 bp ATGATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTTGGAGCATGACGGGATaGACACCATTCAGGTACTGG +
Preference number: 5 (lower is better)
Translates to: MMSEPSWLQKSPCAEEKVWSMTG*TPFRYW
Trigger: CCAGTACCTGAATGGTGTCAATCCCGTCATGCTCCA...AACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACATCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CAA 90 bp GATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCATGCTGGGCAGAGCAATaGAAGATGATTGCAGTGAGG +
Preference number: 5 (lower is better)
Translates to: DVRAILAAKVSMCRREGSCWAEQ*KMIAVR
Trigger: CCTCACTGCAATCATCTTCAATTGCTCTGCCCAGCA...TGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CAA 90 bp TCAGGGCCCAGTTTGTATGATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGCAGAAGAGGAGGAGGTaGTTACAGCTGATGTTCACT +
Preference number: 5 (lower is better)
Translates to: SGPSLYDVRAILAAKVSMQKRRR*LQLMFT
Trigger: AGTGAACATCAGCTGTAACAACCTCCTCCTCTTCTG...CATGGAGACTTTTGCAGCCAAGATGGCTCTGACATCATACAAACTGGGCCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CAA 90 bp TCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAGGTGCAGAAGAGGAGGAGGTaGTTACAGCTGATGTTCACT +
Preference number: 5 (lower is better)
Translates to: SEPSWLQKSPCAEEKVQVQKRRR*LQLMFT
Trigger: AGTGAACATCAGCTGTAACAACCTCCTCCTCTTCTG...CACCTGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CAA 90 bp ATGATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCTGGTCCTTGGGTTCTaGGCTAACCAACCAGAAGAG +
Preference number: 5 (lower is better)
Translates to: MMSEPSWLQKSPCAEEKVLVLGF*ANQPEE
Trigger: CTCTTCTGGTTGGTTAGCCAAGAACCCAAGGACCAG...AACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACATCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CAA 90 bp ATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAGCTTCTTGGGTGGTATTaGGGGGTGGTTAGATGGAGA +
Preference number: 5 (lower is better)
Translates to: MSEPSWLQKSPCAEEKVQLLGWY*GVVRWR
Trigger: TCTCCATCTAACCACCCCCAAATACCACCCAAGAAG...CTGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CAA 90 bp GATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAGATGTCAGAGCCATCTaGGCTGCAAAAGTCTCCATG +
Preference number: 5 (lower is better)
Translates to: DVRAILAAKVSMCRREGSDVRAI*AAKVSM
Trigger: CATGGAGACTTTTGCAGCCAAGATGGCTCTGACATC...TGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CAA 90 bp ATGATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTAGCTCAGGGCCCAGTTaGTATGATGTCAGAGCCATC +
Preference number: 5 (lower is better)
Translates to: MMSEPSWLQKSPCAEEKVSSGPS*YDVRAI
Trigger: GATGGCTCTGACATCATACAAACTGGGCCCTGAGCT...AACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACATCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CAA 90 bp AAGCTGGGCATTCCAAGAGGCTGGAACAAGAGGCTGCCCCAAGTGGGGCAAGAAATATTTTGGTTTTTATaGAACTCACTGGGCTCAAGG +
Preference number: 5 (lower is better)
Translates to: KLGIPRGWNKRLPQVGQEIFWFL*NSLGSR
Trigger: CCTTGAGCCCAGTGAGTTCAATAAAAACCAAAATAT...TTCTTGCCCCACTTGGGGCAGCCTCTTGTTCCAGCCTCTTGGAATGCCCAGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CAA 90 bp GATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCACCTGGTCTACACAAGTaGTCGTCTTTGTCAAGGCAA +
Preference number: 5 (lower is better)
Translates to: DVRAILAAKVSMCRREGSPGLHK*SSLSRQ
Trigger: TTGCCTTGACAAAGACGACAACTTGTGTAGACCAGG...TGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CAA 90 bp ATGATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTGCTGAGTATCGAACATaGGGCTCCATGTACATCAGG +
Preference number: 5 (lower is better)
Translates to: MMSEPSWLQKSPCAEEKVAEYRT*GSMYIR
Trigger: CCTGATGTACATGGAGCCCAATGTTCGATACTCAGC...AACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACATCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CAA 90 bp ATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAGGTGAACTGAGAGCTGAGTATCGAACATaGGGCTCCATGTACATCAGG +
Preference number: 5 (lower is better)
Translates to: ILAAKVSMCRREGSGELRAEYRT*GSMYIR
Trigger: CCTGATGTACATGGAGCCCAATGTTCGATACTCAGC...TCTCAGTTCACCTGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CAA 90 bp GATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCACAGAAGAGGAGGAGGTaGTTACAGCTGATGTTCACT +
Preference number: 5 (lower is better)
Translates to: DVRAILAAKVSMCRREGSQKRRR*LQLMFT
Trigger: AGTGAACATCAGCTGTAACAACCTCCTCCTCTTCTG...TGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CAA 90 bp TTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAGGTGAACTGAGAACACTTCTTGGGTGGTATTaGGGGGTGGTTAGATGGAGA +
Preference number: 5 (lower is better)
Translates to: LAAKVSMCRREGSGELRTLLGWY*GVVRWR
Trigger: TCTCCATCTAACCACCCCCAAATACCACCCAAGAAG...TGTTCTCAGTTCACCTGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CAA 90 bp ATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAGGTGAACTGAGAGATGTCAGAGCCATCTaGGCTGCAAAAGTCTCCATG +
Preference number: 5 (lower is better)
Translates to: ILAAKVSMCRREGSGELRDVRAI*AAKVSM
Trigger: CATGGAGACTTTTGCAGCCAAGATGGCTCTGACATC...TCTCAGTTCACCTGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CAA 90 bp TCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAGGTGGGGATGAAAGGGGAGTaGGATGAAATCTTTGGAGAA +
Preference number: 5 (lower is better)
Translates to: SEPSWLQKSPCAEEKVQVGMKGE*DEIFGE
Trigger: TTCTCCAAAGATTTCATCCAACTCCCCTTTCATCCC...CACCTGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS TCA 90 bp CTGGTCTACACAAGTTGTCGTCTTTGTCAAGGCAAATTTCTTGTCTaGCTCCATCTCCTGAAAGCTGTTGACGTCTACCATGCAGGGGAA +
Preference number: 5 (lower is better)
Translates to: LVYTSCRLCQGKFLV*LHLLKAVDVYHAGE
Trigger: TTCCCCTGCATGGTAGACGTCAACAGCTTTCAGGAGATGGAGTCAGACAAGAAATTTGCCTTGACAAAGACGACAACTTGTGTAGACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CAA 90 bp AGTGAAGCGGTTCCTTCCTTTCGGAGGGGCTATTGTGCATTGGACTTTGGTCAGCACAAGTTGTCGTCTTaGTCAAGGCAAATTTCTTGT +
Preference number: 5 (lower is better)
Translates to: SEAVPSFRRGYCALDFGQHKLSS*SRQISC
Trigger: ACAAGAAATTTGCCTTGACAAAGACGACAACTTGTG...CTGACCAAAGTCCAATGCACAATAGCCCCTCCGAAAGGAAGGAACCGCTTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CAA 90 bp TATGATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTCCTGGTCTACACAAGTaGTCGTCTTTGTCAAGGCAA +
Preference number: 5 (lower is better)
Translates to: YDVRAILAAKVSMCRREGPGLHK*SSLSRQ
Trigger: TTGCCTTGACAAAGACGACAACTTGTGTAGACCAGG...ACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACATCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CAA 90 bp TATGATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTGGTCCTCCTCATGCTaGGACCTTTCTTTCTTCTTG +
Preference number: 5 (lower is better)
Translates to: YDVRAILAAKVSMCRREGWSSSC*DLSFFL
Trigger: CAAGAAGAAAGAAAGGTCCAAGCATGAGGAGGACCA...ACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGATGGCTCTGACATCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CAA 90 bp TCAGGGCCCAGTTTGTATGATGTCAGAGCCATCTTGGCTGCAAAAGTCTCCATGATATTTTGGTTTTTATaGAACTCACTGGGCTCAAGG +
Preference number: 5 (lower is better)
Translates to: SGPSLYDVRAILAAKVSMIFWFL*NSLGSR
Trigger: CCTTGAGCCCAGTGAGTTCAATAAAAACCAAAATAT...CATGGAGACTTTTGCAGCCAAGATGGCTCTGACATCATACAAACTGGGCCCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380149.6
ENST00000448843.7
CDS-3UTR CAA 90 bp ATCTTGGCTGCAAAAGTCTCCATGTGCAGAAGAGAAGGTTCAGGTGAACTGAGACACAAGTTGTCGTCTTaGTCAAGGCAAATTTCTTGT +
Preference number: 5 (lower is better)
Translates to: ILAAKVSMCRREGSGELRHKLSS*SRQISC
Trigger: ACAAGAAATTTGCCTTGACAAAGACGACAACTTGTG...TCTCAGTTCACCTGAACCTTCTCTTCTGCACATGGAGACTTTTGCAGCCAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS CCA 72 bp CGGCCTGGAGGAGAAGAGCGGCACGCCGGACAGGGCTaGGTTTCTGGGCGGAGGGCTAGGGGCTGCGGGGCT +
Preference number: 6 (lower is better)
Translates to: RPGGEERHAGQG*VSGRRARGCGA
Trigger: AGCCCCGCAGCCCCTAGCCCTCCGCCCAGAAACCCAGCCCTGTCCGGCGTGCCGCTCTTCTCCTCCAGGCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS CCA 72 bp AGCCACAGCAGGCACAGTGGGGCGGCCACGTACTGCTaGCGGCCGTTTAGGCAGTGGGTGGGGGCCTCCGCC +
Preference number: 6 (lower is better)
Translates to: SHSRHSGAATYC*RPFRQWVGASA
Trigger: GGCGGAGGCCCCCACCCACTGCCTAAACGGCCGCCAGCAGTACGTGGCCGCCCCACTGTGCCTGCTGTGGCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS GCA 72 bp CTGAGCCACAGCAGGCACAGTGGGGCGGCCACGTACTaGTGGCGGCCGTTTAGGCAGTGGGTGGGGGCCTCC +
Preference number: 6 (lower is better)
Translates to: LSHSRHSGAATY*WRPFRQWVGAS
Trigger: GGAGGCCCCCACCCACTGCCTAAACGGCCGCCAGCAGTACGTGGCCGCCCCACTGTGCCTGCTGTGGCTCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS CCA 72 bp GCCGGTTCCGGCGCCGCACTGTTCCAGCCTCTACTATaGTACAGTCCCTGCGTCGCAGCCTCGGCGGGGGCT +
Preference number: 6 (lower is better)
Translates to: AGSGAALFQPLL*YSPCVAASAGA
Trigger: AGCCCCCGCCGAGGCTGCGACGCAGGGACTGTACCATAGTAGAGGCTGGAACAGTGCGGCGCCGGAACCGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318227.4
CDS CCA 72 bp TGCCCTCCGCCTGGTCAGCGGCCCGGACTGATGCCCTaGAGTGCTTGTCCGCCCACTCCCCAATGTCCCCCA +
Preference number: 6 (lower is better)
Translates to: CPPPGQRPGLMP*SACPPTPQCPP
Trigger: TGGGGGACATTGGGGAGTGGGCGGACAAGCACTCCAGGGCATCAGTCCGGGCCGCTGACCAGGCGGAGGGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380149.6
CDS GCA 72 bp AGGCGGTACACTGCCATGATGGGAAGGAGGAAGGGATaGCCCGGCAACGCTGGCCGCAGCAGCAGCCGGCCT +
Preference number: 6 (lower is better)
Translates to: RRYTAMMGRRKG*PGNAGRSSSRP
Trigger: AGGCCGGCTGCTGCTGCGGCCAGCGTTGCCGGGGCATCCCTTCCTCCTTCCCATCATGGCAGTGTACCGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS CAA 72 bp CCGATGGACGTGACCTGGTCCACGAGGCCCTCGGGGTaGAGCAGCGTGGCCCTCGCGATGGTGTTCACCTGC +
Preference number: 6 (lower is better)
Translates to: PMDVTWSTRPSG*SSVALAMVFTC
Trigger: GCAGGTGAACACCATCGCGAGGGCCACGCTGCTCAACCCCGAGGGCCTCGTGGACCAGGTCACGTCCATCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS GCA 72 bp TCCGCCTGGTCAGCGGCCCGGACTGATGCCCTGGAGTaGTTGTCCGCCCACTCCCCAATGTCCCCCAAGATC +
Preference number: 6 (lower is better)
Translates to: SAWSAARTDALE*LSAHSPMSPKI
Trigger: GATCTTGGGGGACATTGGGGAGTGGGCGGACAAGCACTCCAGGGCATCAGTCCGGGCCGCTGACCAGGCGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380149.6
CDS CCA 72 bp GCAGGATCCTGGGCGGGAGCCCAGGTGTCCGGGATCTaGGCCACTAGGGACTGGGGAGGAACCTCTCAGAGA +
Preference number: 6 (lower is better)
Translates to: AGSWAGAQVSGI*ATRDWGGTSQR
Trigger: TCTCTGAGAGGTTCCTCCCCAGTCCCTAGTGGCCCAGATCCCGGACACCTGGGCTCCCGCCCAGGATCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318227.4
CDS CAA 72 bp GTGGGCCAGGCCCGTGCTCATGAGGTAGATGAGGCCTaGCCTCCCGATGGACGTGACCTGGTCCACGAGGCC +
Preference number: 6 (lower is better)
Translates to: VGQARAHEVDEA*PPDGRDLVHEA
Trigger: GGCCTCGTGGACCAGGTCACGTCCATCGGGAGGCAAGGCCTCATCTACCTCATGAGCACGGGCCTGGCCCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS CCA 72 bp ATACAGCGCCGGCAAACAGGGTCTGAATGCCCCGCGTaGCATTCTTTCCGCTCCAGGACCGCCCTGGGCCTG +
Preference number: 6 (lower is better)
Translates to: IQRRQTGSECPA*HSFRSRTALGL
Trigger: CAGGCCCAGGGCGGTCCTGGAGCGGAAAGAATGCCACGCGGGGCATTCAGACCCTGTTTGCCGGCGCTGTAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318227.4
CDS CAA 72 bp GCCTGGTCAGCGGCCCGGACTGATGCCCTGGAGTGCTaGTCCGCCCACTCCCCAATGTCCCCCAAGATCTGT +
Preference number: 6 (lower is better)
Translates to: AWSAARTDALEC*SAHSPMSPKIC
Trigger: ACAGATCTTGGGGGACATTGGGGAGTGGGCGGACAAGCACTCCAGGGCATCAGTCCGGGCCGCTGACCAGGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380149.6
CDS GCA 72 bp GCCGCACTGTTCCAGCCTCTACTATGGTACAGTCCCTaGGTCGCAGCCTCGGCGGGGGCTCTAAGAACGGGA +
Preference number: 6 (lower is better)
Translates to: AALFQPLLWYSP*VAASAGALRTG
Trigger: TCCCGTTCTTAGAGCCCCCGCCGAGGCTGCGACGCAGGGACTGTACCATAGTAGAGGCTGGAACAGTGCGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318227.4
CDS GCA 72 bp CCAGGGGCGAAGTCCCTGCCCATTCGATCTAGCCGCTaGTTGGGGCTTTCACCACACGTGCCCACCAGTGTG +
Preference number: 6 (lower is better)
Translates to: PGAKSLPIRSSR*LGLSPHVPTSV
Trigger: CACACTGGTGGGCACGTGTGGTGAAAGCCCCAAGCAGCGGCTAGATCGAATGGGCAGGGACTTCGCCCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS TCA 72 bp AGGGACCAGTGGTCACACACAGGCGGTACACTGCCATaGTGGGAAGGAGGAAGGGATGCCCCGGCAACGCTG +
Preference number: 6 (lower is better)
Translates to: RDQWSHTGGTLP*WEGGRDAPATL
Trigger: CAGCGTTGCCGGGGCATCCCTTCCTCCTTCCCATCATGGCAGTGTACCGCCTGTGTGTGACCACTGGTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS GCA 72 bp GGGTTGAGCAGCGTGGCCCTCGCGATGGTGTTCACCTaGAGCGTGTATCGAGTGTGGGGGAGTAGGAGCTTG +
Preference number: 6 (lower is better)
Translates to: GLSSVALAMVFT*SVYRVWGSRSL
Trigger: CAAGCTCCTACTCCCCCACACTCGATACACGCTGCAGGTGAACACCATCGCGAGGGCCACGCTGCTCAACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS CCA 72 bp GGTAACGCCTGTATAATTGGGACACTGCCCTCCGCCTaGTCAGCGGCCCGGACTGATGCCCTGGAGTGCTTG +
Preference number: 6 (lower is better)
Translates to: GNACIIGTLPSA*SAARTDALECL
Trigger: CAAGCACTCCAGGGCATCAGTCCGGGCCGCTGACCAGGCGGAGGGCAGTGTCCCAATTATACAGGCGTTACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380149.6
CDS TCA 72 bp GCTGCTTGGGGCTTTCACCACACGTGCCCACCAGTGTaGCAGAGATGTTGTCCAGTGTGCCGGCCCTCAGGT +
Preference number: 6 (lower is better)
Translates to: AAWGFHHTCPPV*QRCCPVCRPSG
Trigger: ACCTGAGGGCCGGCACACTGGACAACATCTCTGTCACACTGGTGGGCACGTGTGGTGAAAGCCCCAAGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS TCA 72 bp CTTGGGAAACCTGAGCTTTCCCGGCCCAGGAACGCCTaGGCAAAAATCTCGCCAGTCCAGGCCTGCAGCTCC +
Preference number: 6 (lower is better)
Translates to: LGKPELSRPRNA*AKISPVQACSS
Trigger: GGAGCTGCAGGCCTGGACTGGCGAGATTTTTGCTCAGGCGTTCCTGGGCCGGGAAAGCTCAGGTTTCCCAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS GCA 72 bp GAAAGCGAAATACAGCGCCGGCAAACAGGGTCTGAATaGCCCGCGTGGCATTCTTTCCGCTCCAGGACCGCC +
Preference number: 6 (lower is better)
Translates to: ESEIQRRQTGSE*PAWHSFRSRTA
Trigger: GGCGGTCCTGGAGCGGAAAGAATGCCACGCGGGGCATTCAGACCCTGTTTGCCGGCGCTGTATTTCGCTTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318227.4
CDS GCA 72 bp CAGGTAGGGACCAGTGGTCACACACAGGCGGTACACTaGCATGATGGGAAGGAGGAAGGGATGCCCCGGCAA +
Preference number: 6 (lower is better)
Translates to: QVGTSGHTQAVH*HDGKEEGMPRQ
Trigger: TTGCCGGGGCATCCCTTCCTCCTTCCCATCATGGCAGTGTACCGCCTGTGTGTGACCACTGGTCCCTACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS CCA 72 bp CCTCTGGCTGGCTCACCCAGATGGATATCAGGAGCCTaGGTTCCACTGCGGAGGGAGGGATCAGATGCTGAG +
Preference number: 6 (lower is better)
Translates to: PLAGSPRWISGA*VPLRREGSDAE
Trigger: CTCAGCATCTGATCCCTCCCTCCGCAGTGGAACCCAGGCTCCTGATATCCATCTGGGTGAGCCAGCCAGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380149.6
CDS CAA 90 bp AAGCTCCCTGCTGGCGGCTCGGGCTTCCTCTCTCCGCCCACAGTCTaGCACTCTAATACTTGTTTGCTTGCCTCTGACACAGCCGGTCCC +
Preference number: 6 (lower is better)
Translates to: KLPAGGSGFLSPPTV*HSNTCLLASDTAGP
Trigger: GGGACCGGCTGTGTCAGAGGCAAGCAAACAAGTATTAGAGTGCAAGACTGTGGGCGGAGAGAGGAAGCCCGAGCCGCCAGCAGGGAGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS CAA 90 bp ACCGATCCAGGGGCGAAGTCCCTGCCCATTCGATCTAGCCGCTGCTaGGGGCTTTCACCACACGTGCCCACCAGTGTGACAGAGATGTTG +
Preference number: 6 (lower is better)
Translates to: TDPGAKSLPIRSSRC*GLSPHVPTSVTEML
Trigger: CAACATCTCTGTCACACTGGTGGGCACGTGTGGTGAAAGCCCCAAGCAGCGGCTAGATCGAATGGGCAGGGACTTCGCCCCTGGATCGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS GCA 72 bp CGCAGCGTGGCCATGGCGAAGGCCTCGCACAGCAAATaGGTGCACAGAAAGTGCGTGTTGTTTTCGTGCACC +
Preference number: 6 (lower is better)
Translates to: RSVAMAKASHSK*VHRKCVLFSCT
Trigger: GGTGCACGAAAACAACACGCACTTTCTGTGCACGCATTTGCTGTGCGAGGCCTTCGCCATGGCCACGCTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS CCA 72 bp TGTTTGCTTGCCTCTGACACAGCCGGTCCCTCTGGCTaGCTCACCCAGATGGATATCAGGAGCCTGGGTTCC +
Preference number: 6 (lower is better)
Translates to: CLLASDTAGPSG*LTQMDIRSLGS
Trigger: GGAACCCAGGCTCCTGATATCCATCTGGGTGAGCCAGCCAGAGGGACCGGCTGTGTCAGAGGCAAGCAAACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS CAA 90 bp TCGGGCTTCCTCTCTCCGCCCACAGTCTTGCACTCTAATACTTGTTaGCTTGCCTCTGACACAGCCGGTCCCTCTGGCTGGCTCACCCAG +
Preference number: 6 (lower is better)
Translates to: SGFLSPPTVLHSNTC*LASDTAGPSGWLTQ
Trigger: CTGGGTGAGCCAGCCAGAGGGACCGGCTGTGTCAGAGGCAAGCAAACAAGTATTAGAGTGCAAGACTGTGGGCGGAGAGAGGAAGCCCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS CAA 90 bp GCTTCCTCTCTCCGCCCACAGTCTTGCACTCTAATACTTGTTTGCTaGCCTCTGACACAGCCGGTCCCTCTGGCTGGCTCACCCAGATGG +
Preference number: 6 (lower is better)
Translates to: ASSLRPQSCTLILVC*PLTQPVPLAGSPRW
Trigger: CCATCTGGGTGAGCCAGCCAGAGGGACCGGCTGTGTCAGAGGCAAGCAAACAAGTATTAGAGTGCAAGACTGTGGGCGGAGAGAGGAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS CAA 90 bp TCCTGTCCCAGCAAGGGGGCCACCATGTCATTGGTGACAGGCAGCTaGCTGGGCAAGCTAGAGATGCAGTGGAGCATGACGGGATTGACA +
Preference number: 6 (lower is better)
Translates to: SCPSKGATMSLVTGS*LGKLEMQWSMTGLT
Trigger: TGTCAATCCCGTCATGCTCCACTGCATCTCTAGCTTGCCCAGCAAGCTGCCTGTCACCAATGACATGGTGGCCCCCTTGCTGGGACAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS GCA 72 bp CCTTGTACTTCTGTACCGATCCAGGGGCGAAGTCCCTaGCCATTCGATCTAGCCGCTGCTTGGGGCTTTCAC +
Preference number: 6 (lower is better)
Translates to: PCTSVPIQGRSP*PFDLAAAWGFH
Trigger: GTGAAAGCCCCAAGCAGCGGCTAGATCGAATGGGCAGGGACTTCGCCCCTGGATCGGTACAGAAGTACAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS GCA 72 bp GCGTGGCCATGGCGAAGGCCTCGCACAGCAAATGCGTaGACAGAAAGTGCGTGTTGTTTTCGTGCACCAGGA +
Preference number: 6 (lower is better)
Translates to: AWPWRRPRTANA*TESACCFRAPG
Trigger: TCCTGGTGCACGAAAACAACACGCACTTTCTGTGCACGCATTTGCTGTGCGAGGCCTTCGCCATGGCCACGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS GCA 72 bp CTGGCGGCTCGGGCTTCCTCTCTCCGCCCACAGTCTTaGACTCTAATACTTGTTTGCTTGCCTCTGACACAG +
Preference number: 6 (lower is better)
Translates to: LAARASSLRPQS*TLILVCLPLTQ
Trigger: CTGTGTCAGAGGCAAGCAAACAAGTATTAGAGTGCAAGACTGTGGGCGGAGAGAGGAAGCCCGAGCCGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS CAA 72 bp CTCCGCCCACAGTCTTGCACTCTAATACTTGTTTGCTaGCCTCTGACACAGCCGGTCCCTCTGGCTGGCTCA +
Preference number: 6 (lower is better)
Translates to: LRPQSCTLILVC*PLTQPVPLAGS
Trigger: TGAGCCAGCCAGAGGGACCGGCTGTGTCAGAGGCAAGCAAACAAGTATTAGAGTGCAAGACTGTGGGCGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS CAA 72 bp GCTGGCGGCTCGGGCTTCCTCTCTCCGCCCACAGTCTaGCACTCTAATACTTGTTTGCTTGCCTCTGACACA +
Preference number: 6 (lower is better)
Translates to: AGGSGFLSPPTV*HSNTCLLASDT
Trigger: TGTGTCAGAGGCAAGCAAACAAGTATTAGAGTGCAAGACTGTGGGCGGAGAGAGGAAGCCCGAGCCGCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS CAA 90 bp CACCAGAAGATGTTCTGCATGTCATCCAGCTTCTTCCAGGAGCCCTaGCGATCCAACAGCCCTCGAAGCTTCATTCCCAAGGACGCAGGG +
Preference number: 6 (lower is better)
Translates to: HQKMFCMSSSFFQEP*RSNSPRSFIPKDAG
Trigger: CCCTGCGTCCTTGGGAATGAAGCTTCGAGGGCTGTTGGATCGCAAGGGCTCCTGGAAGAAGCTGGATGACATGCAGAACATCTTCTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS CAA 90 bp ATGGCGAAGGCCTCGCACAGCAAATGCGTGCACAGAAAGTGCGTGTaGTTTTCGTGCACCAGGAACTCAGAGTTGCGCACCCACGTCTTG +
Preference number: 6 (lower is better)
Translates to: MAKASHSKCVHRKCV*FSCTRNSELRTHVL
Trigger: CAAGACGTGGGTGCGCAACTCTGAGTTCCTGGTGCACGAAAACAACACGCACTTTCTGTGCACGCATTTGCTGTGCGAGGCCTTCGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS CCA 72 bp GTGACAGGCAGCTTGCTGGGCAAGCTAGAGATGCAGTaGAGCATGACGGGATTGACACCATTCAGGTACTGG +
Preference number: 6 (lower is better)
Translates to: VTGSLLGKLEMQ*SMTGLTPFRYW
Trigger: CCAGTACCTGAATGGTGTCAATCCCGTCATGCTCCACTGCATCTCTAGCTTGCCCAGCAAGCTGCCTGTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS CAA 72 bp GCCTCGCACAGCAAATGCGTGCACAGAAAGTGCGTGTaGTTTTCGTGCACCAGGAACTCAGAGTTGCGCACC +
Preference number: 6 (lower is better)
Translates to: ASHSKCVHRKCV*FSCTRNSELRT
Trigger: GGTGCGCAACTCTGAGTTCCTGGTGCACGAAAACAACACGCACTTTCTGTGCACGCATTTGCTGTGCGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS TCA 72 bp CTCGAAGCTTCATTCCCAAGGACGCAGGGATGGCATTaGAGAGCAGCGAGATCGTCTTGGTGGCTGAGTATC +
Preference number: 6 (lower is better)
Translates to: LEASFPRTQGWH*RAARSSWWLSI
Trigger: GATACTCAGCCACCAAGACGATCTCGCTGCTCTTCAATGCCATCCCTGCGTCCTTGGGAATGAAGCTTCGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS GCA 72 bp TGTTCTGCATGTCATCCAGCTTCTTCCAGGAGCCCTTaGGATCCAACAGCCCTCGAAGCTTCATTCCCAAGG +
Preference number: 6 (lower is better)
Translates to: CSACHPASSRSP*DPTALEASFPR
Trigger: CCTTGGGAATGAAGCTTCGAGGGCTGTTGGATCGCAAGGGCTCCTGGAAGAAGCTGGATGACATGCAGAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS CCA 72 bp GATATCAGGAGCCTGGGTTCCACTCATTCTCTGCTCTaGAGTAGGGCAGGTCAGGAAAGCGAAATACAGCGC +
Preference number: 6 (lower is better)
Translates to: DIRSLGSTHSLL*SRAGQESEIQR
Trigger: GCGCTGTATTTCGCTTTCCTGACCTGCCCTACTCCAGAGCAGAGAATGAGTGGAACCCAGGCTCCTGATATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318227.4
CDS CCA 72 bp GCTCCATGTACATCAGGGATGGGATGTCAATTTTCATaGGGAAGCCGGGCAGGTACCGATTCCCACTGCTGT +
Preference number: 6 (lower is better)
Translates to: APCTSGMGCQFS*GSRAGTDSHCC
Trigger: ACAGCAGTGGGAATCGGTACCTGCCCGGCTTCCCCATGAAAATTGACATCCCATCCCTGATGTACATGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS GCA 72 bp AGCAAATGCGTGCACAGAAAGTGCGTGTTGTTTTCGTaGACCAGGAACTCAGAGTTGCGCACCCACGTCTTG +
Preference number: 6 (lower is better)
Translates to: SKCVHRKCVLFS*TRNSELRTHVL
Trigger: CAAGACGTGGGTGCGCAACTCTGAGTTCCTGGTGCACGAAAACAACACGCACTTTCTGTGCACGCATTTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS CCA 72 bp CCTGCAGCTCCGAATCCTGCTGCACAGATGCGTCACTaGGATAATAGTAGCCCACGATTTCTGAGACAAAGC +
Preference number: 6 (lower is better)
Translates to: PAAPNPAAQMRH*DNSSPRFLRQS
Trigger: GCTTTGTCTCAGAAATCGTGGGCTACTATTATCCCAGTGACGCATCTGTGCAGCAGGATTCGGAGCTGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS CAA 72 bp ATGTTCTGCATGTCATCCAGCTTCTTCCAGGAGCCCTaGCGATCCAACAGCCCTCGAAGCTTCATTCCCAAG +
Preference number: 6 (lower is better)
Translates to: MFCMSSSFFQEP*RSNSPRSFIPK
Trigger: CTTGGGAATGAAGCTTCGAGGGCTGTTGGATCGCAAGGGCTCCTGGAAGAAGCTGGATGACATGCAGAACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS CAA 90 bp ATTCCCAAGGACGCAGGGATGGCATTGAAGAGCAGCGAGATCGTCTaGGTGGCTGAGTATCGAACATTGGGCTCCATGTACATCAGGGAT +
Preference number: 6 (lower is better)
Translates to: IPKDAGMALKSSEIV*VAEYRTLGSMYIRD
Trigger: ATCCCTGATGTACATGGAGCCCAATGTTCGATACTCAGCCACCAAGACGATCTCGCTGCTCTTCAATGCCATCCCTGCGTCCTTGGGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS TCA 72 bp GATGGCATTGAAGAGCAGCGAGATCGTCTTGGTGGCTaGGTATCGAACATTGGGCTCCATGTACATCAGGGA +
Preference number: 6 (lower is better)
Translates to: DGIEEQRDRLGG*VSNIGLHVHQG
Trigger: TCCCTGATGTACATGGAGCCCAATGTTCGATACTCAGCCACCAAGACGATCTCGCTGCTCTTCAATGCCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS CAA 90 bp GCATTGAAGAGCAGCGAGATCGTCTTGGTGGCTGAGTATCGAACATaGGGCTCCATGTACATCAGGGATGGGATGTCAATTTTCATGGGG +
Preference number: 6 (lower is better)
Translates to: ALKSSEIVLVAEYRT*GSMYIRDGMSIFMG
Trigger: CCCCATGAAAATTGACATCCCATCCCTGATGTACATGGAGCCCAATGTTCGATACTCAGCCACCAAGACGATCTCGCTGCTCTTCAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS CAA 90 bp GACCTGAGGAACTGGTCCTCCTCATGCTTGGACCTTTCTTTCTTCTaGGGTGGTATTTGGGGGTGGTTAGATGGAGACGCTGTTCTCAAT +
Preference number: 6 (lower is better)
Translates to: DLRNWSSSCLDLSFF*GGIWGWLDGDAVLN
Trigger: ATTGAGAACAGCGTCTCCATCTAACCACCCCCAAATACCACCCAAGAAGAAAGAAAGGTCCAAGCATGAGGAGGACCAGTTCCTCAGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
ENST00000583808.1
CDS TCA 72 bp CAAATTTCTTGTCTGACTCCATCTCCTGAAAGCTGTTaGCGTCTACCATGCAGGGGAAGCCAGGGGCATAGA +
Preference number: 6 (lower is better)
Translates to: QISCLTPSPESC*RLPCRGSQGHR
Trigger: TCTATGCCCCTGGCTTCCCCTGCATGGTAGACGTCAACAGCTTTCAGGAGATGGAGTCAGACAAGAAATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS GCA 72 bp TTTGTCGTGAAGGTCTTATGGCACCAGAAGATGTTCTaGATGTCATCCAGCTTCTTCCAGGAGCCCTTGCGA +
Preference number: 6 (lower is better)
Translates to: FVVKVLWHQKMF*MSSSFFQEPLR
Trigger: TCGCAAGGGCTCCTGGAAGAAGCTGGATGACATGCAGAACATCTTCTGGTGCCATAAGACCTTCACGACAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS CCA 72 bp GCAGCGAGATCGTCTTGGTGGCTGAGTATCGAACATTaGGCTCCATGTACATCAGGGATGGGATGTCAATTT +
Preference number: 6 (lower is better)
Translates to: AARSSWWLSIEH*APCTSGMGCQF
Trigger: AAATTGACATCCCATCCCTGATGTACATGGAGCCCAATGTTCGATACTCAGCCACCAAGACGATCTCGCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS CAA 72 bp AGCAGCGAGATCGTCTTGGTGGCTGAGTATCGAACATaGGGCTCCATGTACATCAGGGATGGGATGTCAATT +
Preference number: 6 (lower is better)
Translates to: SSEIVLVAEYRT*GSMYIRDGMSI
Trigger: AATTGACATCCCATCCCTGATGTACATGGAGCCCAATGTTCGATACTCAGCCACCAAGACGATCTCGCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS CAA 72 bp TTGGGTTCTTGGCTAACCAACCAGAAGAGGAGGAGGTaGTTACAGCTGATGTTCACTTCAGGGAGGGTGTCT +
Preference number: 6 (lower is better)
Translates to: LGSWLTNQKRRR*LQLMFTSGRVS
Trigger: AGACACCCTCCCTGAAGTGAACATCAGCTGTAACAACCTCCTCCTCTTCTGGTTGGTTAGCCAAGAACCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
ENST00000583808.1
CDS CAA 90 bp ACCGATTCCCACTGCTGTCACCCTGGTCTACACAAGTTGTCGTCTTaGTCAAGGCAAATTTCTTGTCTGACTCCATCTCCTGAAAGCTGT +
Preference number: 6 (lower is better)
Translates to: TDSHCCHPGLHKLSS*SRQISCLTPSPESC
Trigger: ACAGCTTTCAGGAGATGGAGTCAGACAAGAAATTTGCCTTGACAAAGACGACAACTTGTGTAGACCAGGGTGACAGCAGTGGGAATCGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS CAA 72 bp CACTGCTGTCACCCTGGTCTACACAAGTTGTCGTCTTaGTCAAGGCAAATTTCTTGTCTGACTCCATCTCCT +
Preference number: 6 (lower is better)
Translates to: HCCHPGLHKLSS*SRQISCLTPSP
Trigger: AGGAGATGGAGTCAGACAAGAAATTTGCCTTGACAAAGACGACAACTTGTGTAGACCAGGGTGACAGCAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS CAA 72 bp ACCGATTCCCACTGCTGTCACCCTGGTCTACACAAGTaGTCGTCTTTGTCAAGGCAAATTTCTTGTCTGACT +
Preference number: 6 (lower is better)
Translates to: TDSHCCHPGLHK*SSLSRQISCLT
Trigger: AGTCAGACAAGAAATTTGCCTTGACAAAGACGACAACTTGTGTAGACCAGGGTGACAGCAGTGGGAATCGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7
CDS TCA 72 bp ACAAGTTGTCGTCTTTGTCAAGGCAAATTTCTTGTCTaGCTCCATCTCCTGAAAGCTGTTGACGTCTACCAT +
Preference number: 6 (lower is better)
Translates to: TSCRLCQGKFLV*LHLLKAVDVYH
Trigger: ATGGTAGACGTCAACAGCTTTCAGGAGATGGAGTCAGACAAGAAATTTGCCTTGACAAAGACGACAACTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318227.4
ENST00000380149.6
ENST00000448843.7