RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ALOX15B (Homo sapiens)

Ensembl gene IDs: ENSG00000179593

Ensembl transcript IDs: ENST00000380173.6, ENST00000380183.9, ENST00000571240.1, ENST00000572022.5, ENST00000573359.1

Found 327 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp CCTCAAGGTGGGCTCTGCGGGCACTTTGAGGCTTGGAGCCTCCAAAAGACTCAGGTATGGTGGTGGGGGTaGGTTACAGAGTCTGGTTGT +
Preference number: 2 (lower is better)
Translates to: PQGGLCGHFEAWSLQKTQVWWWG*VTESGC
Trigger: ACAACCAGACTCTGTAACTCACCCCCACCACCATAC...CTGAGTCTTTTGGAGGCTCCAAGCCTCAAAGTGCCCGCAGAGCCCACCTTGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
3UTR-3UTR TCA 90 bp ACTAGCAAAACCCTCAAGGTGGGCTCTGCGGGCACTTTGAGGCTTGGAGCCTCCGTATGGTGGTGGGGGTaGGTTACAGAGTCTGGTTGT +
Preference number: 2 (lower is better)
Translates to: TSKTLKVGSAGTLRLGASVWWWG*VTESGC
Trigger: ACAACCAGACTCTGTAACTCACCCCCACCACCATAC...GGAGGCTCCAAGCCTCAAAGTGCCCGCAGAGCCCACCTTGAGGGTTTTGCTAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
3UTR-3UTR CCA 90 bp ACTAGCAAAACCCTCAAGGTGGGCTCTGCGGGCACTTTGAGGCTTGGAGCCTCCGTGAGTTACAGAGTCTaGTTGTCCCAGGAGAGGCAC +
Preference number: 2 (lower is better)
Translates to: TSKTLKVGSAGTLRLGASVSYRV*LSQERH
Trigger: GTGCCTCTCCTGGGACAACCAGACTCTGTAACTCAC...GGAGGCTCCAAGCCTCAAAGTGCCCGCAGAGCCCACCTTGAGGGTTTTGCTAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
3UTR-3UTR CCA 90 bp GTCCTTGAGTTGGGTGACCATAAGGTCCAATCAGTGGATGCTAGTGGGCCCTGGGGGCACTTTGAGGCTTaGAGCCTCCAAAAGACTCAG +
Preference number: 2 (lower is better)
Translates to: VLELGDHKVQSVDASGPWGHFEA*SLQKTQ
Trigger: CTGAGTCTTTTGGAGGCTCCAAGCCTCAAAGTGCCC...CCAGGGCCCACTAGCATCCACTGATTGGACCTTATGGTCACCCAACTCAAGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
3UTR-3UTR CCA 90 bp GTGTGTATGGTGGTGGGGGTGAGTTACAGAGTCTGGTTGTCCCAGGAGAGGCACAGGAGTCCTTTTCTCTaGGTGCCAGTTATCCTAGAG +
Preference number: 2 (lower is better)
Translates to: VCMVVGVSYRVWLSQERHRSPFL*VPVILE
Trigger: CTCTAGGATAACTGGCACCCAGAGAAAAGGACTCCT...GTGCCTCTCCTGGGACAACCAGACTCTGTAACTCACCCCCACCACCATACACAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
3UTR-3UTR CCA 90 bp GTCCTTGAGTTGGGTGACCATAAGGTCCAATCAGTGGATGCTAGTGGGCCCTGGAGGAGTCCTTTTCTCTaGGTGCCAGTTATCCTAGAG +
Preference number: 2 (lower is better)
Translates to: VLELGDHKVQSVDASGPWRSPFL*VPVILE
Trigger: CTCTAGGATAACTGGCACCCAGAGAAAAGGACTCCT...CCAGGGCCCACTAGCATCCACTGATTGGACCTTATGGTCACCCAACTCAAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
3UTR-3UTR CCA 90 bp CTCTTTGGCAGCCACTTCTTGGTGGCTGTCCTTGAGTTGGGTGACCATAAGGTCAGGAGTCCTTTTCTCTaGGTGCCAGTTATCCTAGAG +
Preference number: 2 (lower is better)
Translates to: LFGSHFLVAVLELGDHKVRSPFL*VPVILE
Trigger: CTCTAGGATAACTGGCACCCAGAGAAAAGGACTCCT...GACCTTATGGTCACCCAACTCAAGGACAGCCACCAAGAAGTGGCTGCCAAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
3UTR-3UTR CAA 90 bp GTCCTTGAGTTGGGTGACCATAAGGTCCAATCAGTGGATGCTAGTGGGCCCTGGGGCTCTGCGGGCACTTaGAGGCTTGGAGCCTCCAAA +
Preference number: 3 (lower is better)
Translates to: VLELGDHKVQSVDASGPWGSAGT*RLGASK
Trigger: TTTGGAGGCTCCAAGCCTCAAAGTGCCCGCAGAGCC...CCAGGGCCCACTAGCATCCACTGATTGGACCTTATGGTCACCCAACTCAAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
3UTR CCA 72 bp GAGCCACTGCGCCCAGTCTCTTTGGCAGCCACTTCTTaGTGGCTGTCCTTGAGTTGGGTGACCATAAGGTCC +
Preference number: 3 (lower is better)
Translates to: EPLRPVSLAATS*WLSLSWVTIRS
Trigger: GGACCTTATGGTCACCCAACTCAAGGACAGCCACCAAGAAGTGGCTGCCAAAGAGACTGGGCGCAGTGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
3UTR-3UTR CAA 90 bp CTCTTTGGCAGCCACTTCTTGGTGGCTGTCCTTGAGTTGGGTGACCATAAGGTCGGCTCTGCGGGCACTTaGAGGCTTGGAGCCTCCAAA +
Preference number: 3 (lower is better)
Translates to: LFGSHFLVAVLELGDHKVGSAGT*RLGASK
Trigger: TTTGGAGGCTCCAAGCCTCAAAGTGCCCGCAGAGCC...GACCTTATGGTCACCCAACTCAAGGACAGCCACCAAGAAGTGGCTGCCAAAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
3UTR TCA 72 bp CTAGCAAAACCCTCAAGGTGGGCTCTGCGGGCACTTTaGGGCTTGGAGCCTCCAAAAGACTCAGTGGTTCTG +
Preference number: 3 (lower is better)
Translates to: LAKPSRWALRAL*GLEPPKDSVVL
Trigger: CAGAACCACTGAGTCTTTTGGAGGCTCCAAGCCTCAAAGTGCCCGCAGAGCCCACCTTGAGGGTTTTGCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
3UTR CCA 72 bp CTGTCCTTGAGTTGGGTGACCATAAGGTCCAATCAGTaGATGCTAGTGGGCCCTGGGGCGGGATTATGTGCT +
Preference number: 3 (lower is better)
Translates to: LSLSWVTIRSNQ*MLVGPGAGLCA
Trigger: AGCACATAATCCCGCCCCAGGGCCCACTAGCATCCACTGATTGGACCTTATGGTCACCCAACTCAAGGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
3UTR CCA 72 bp TCTTTGGCAGCCACTTCTTGGTGGCTGTCCTTGAGTTaGGTGACCATAAGGTCCAATCAGTGGATGCTAGTG +
Preference number: 3 (lower is better)
Translates to: SLAATSWWLSLS*VTIRSNQWMLV
Trigger: CACTAGCATCCACTGATTGGACCTTATGGTCACCCAACTCAAGGACAGCCACCAAGAAGTGGCTGCCAAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
3UTR CCA 72 bp GGGCACTTTGAGGCTTGGAGCCTCCAAAAGACTCAGTaGTTCTGTCCTGAGACTCTGTTCTTGGTAGATTTT +
Preference number: 3 (lower is better)
Translates to: GHFEAWSLQKTQ*FCPETLFLVDF
Trigger: AAAATCTACCAAGAACAGAGTCTCAGGACAGAACCACTGAGTCTTTTGGAGGCTCCAAGCCTCAAAGTGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CCA 90 bp CCTCAAGGTGGGCTCTGCGGGCACTTTGAGGCTTGGAGCCTCCAAAAGACTCAGCAGGGGAAGAGGAGGTaGCCGCCCCGCGGCGGTGTC +
Preference number: 4 (lower is better)
Translates to: PQGGLCGHFEAWSLQKTQQGKRR*PPRGGV
Trigger: GACACCGCCGCGGGGCGGCCACCTCCTCTTCCCCTG...CTGAGTCTTTTGGAGGCTCCAAGCCTCAAAGTGCCCGCAGAGCCCACCTTGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
CDS-3UTR TCA 90 bp GAGTTGGGTGACCATAAGGTCCAATCAGTGGATGCTAGTGGGCCCTGGGGCGGGTGGCAGTGGGGCAGCTaGCGCAGGGTAGCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: ELGDHKVQSVDASGPWGGWQWGS*RRVARV
Trigger: CACCCTGGCTACCCTGCGTCAGCTGCCCCACTGCCA...CCCGCCCCAGGGCCCACTAGCATCCACTGATTGGACCTTATGGTCACCCAACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
CDS-3UTR TCA 90 bp GTGTGTATGGTGGTGGGGGTGAGTTACAGAGTCTGGTTGTCCCAGGAGAGGCACGGCCGGGGGTCTGGCTaGGCTGGATGGCGAGAGGCA +
Preference number: 4 (lower is better)
Translates to: VCMVVGVSYRVWLSQERHGRGSG*AGWREA
Trigger: TGCCTCTCGCCATCCAGCTCAGCCAGACCCCCGGCC...GTGCCTCTCCTGGGACAACCAGACTCTGTAACTCACCCCCACCACCATACACAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CCA 90 bp GAGTTGGGTGACCATAAGGTCCAATCAGTGGATGCTAGTGGGCCCTGGGGCGGGTCCGGGAGCGTCACCTaGAAGTCCTCCTCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: ELGDHKVQSVDASGPWGGSGSVT*KSSSAP
Trigger: GGGCGCTGAGGAGGACTTCCAGGTGACGCTCCCGGA...CCCGCCCCAGGGCCCACTAGCATCCACTGATTGGACCTTATGGTCACCCAACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
CDS-3UTR CCA 90 bp CCTCAAGGTGGGCTCTGCGGGCACTTTGAGGCTTGGAGCCTCCAAAAGACTCAGCGCGGCGGTGTCAGCTaGAACCAGCGGCAGAACCAG +
Preference number: 4 (lower is better)
Translates to: PQGGLCGHFEAWSLQKTQRGGVS*NQRQNQ
Trigger: CTGGTTCTGCCGCTGGTTCCAGCTGACACCGCCGCG...CTGAGTCTTTTGGAGGCTCCAAGCCTCAAAGTGCCCGCAGAGCCCACCTTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
CDS-3UTR CCA 90 bp GCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGGGCCTGTGTTCCCAGGGGAAGAGGAGGTaGCCGCCCCGCGGCGGTGTC +
Preference number: 4 (lower is better)
Translates to: ASYPRAMWSKGCHLGLCSQGKRR*PPRGGV
Trigger: GACACCGCCGCGGGGCGGCCACCTCCTCTTCCCCTG...GGAACACAGGCCCAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CCA 90 bp ACTAGCAAAACCCTCAAGGTGGGCTCTGCGGGCACTTTGAGGCTTGGAGCCTCCGGGGTCTGGCTGAGCTaGATGGCGAGAGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: TSKTLKVGSAGTLRLGASGVWLS*MARGSS
Trigger: GCTGCTGCCTCTCGCCATCCAGCTCAGCCAGACCCC...GGAGGCTCCAAGCCTCAAAGTGCCCGCAGAGCCCACCTTGAGGGTTTTGCTAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
CDS-3UTR TCA 90 bp TGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGGGCCTGTGGCCGGGGGTCTGGCTaGGCTGGATGGCGAGAGGCA +
Preference number: 4 (lower is better)
Translates to: WVPVILERCGQRDVIWACGRGSG*AGWREA
Trigger: TGCCTCTCGCCATCCAGCTCAGCCAGACCCCCGGCC...ACAGGCCCAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGCACCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR TCA 90 bp GAGTTGGGTGACCATAAGGTCCAATCAGTGGATGCTAGTGGGCCCTGGGGCGGGCTCAGGCAGCAGATGTaGGTGCAGCAGGTGCGTGAG +
Preference number: 4 (lower is better)
Translates to: ELGDHKVQSVDASGPWGGLRQQM*VQQVRE
Trigger: CTCACGCACCTGCTGCACTCACATCTGCTGCCTGAG...CCCGCCCCAGGGCCCACTAGCATCCACTGATTGGACCTTATGGTCACCCAACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
CDS-3UTR TCA 90 bp CTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGGGCCTGTGGCAGTGGGGCAGCTaGCGCAGGGTAGCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: LGASYPRAMWSKGCHLGLWQWGS*RRVARV
Trigger: CACCCTGGCTACCCTGCGTCAGCTGCCCCACTGCCA...CAGGCCCAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGCACCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR GCA 90 bp GACCATAAGGTCCAATCAGTGGATGCTAGTGGGCCCTGGGGCGGGATTATGTGCTTGGCTGTACCCTCCTaGAGCACCAGGGTCCCCGCC +
Preference number: 4 (lower is better)
Translates to: DHKVQSVDASGPWGGIMCLAVPS*STRVPA
Trigger: GGCGGGGACCCTGGTGCTGCAGGAGGGTACAGCCAA...GCACATAATCCCGCCCCAGGGCCCACTAGCATCCACTGATTGGACCTTATGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
CDS-3UTR GCA 90 bp CCTCAAGGTGGGCTCTGCGGGCACTTTGAGGCTTGGAGCCTCCAAAAGACTCAGGTGGTGGCAGCTGCATaGTGGGTGGCAGGTTGGGCA +
Preference number: 4 (lower is better)
Translates to: PQGGLCGHFEAWSLQKTQVVAAA*WVAGWA
Trigger: TGCCCAACCTGCCACCCAGCATGCAGCTGCCACCAC...CTGAGTCTTTTGGAGGCTCCAAGCCTCAAAGTGCCCGCAGAGCCCACCTTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
CDS-3UTR CCA 90 bp ACTAGCAAAACCCTCAAGGTGGGCTCTGCGGGCACTTTGAGGCTTGGAGCCTCCTTTGGGCCGGGGGTCTaGCTGAGCTGGATGGCGAGA +
Preference number: 4 (lower is better)
Translates to: TSKTLKVGSAGTLRLGASFGPGV*LSWMAR
Trigger: TCTCGCCATCCAGCTCAGCCAGACCCCCGGCCCAAA...GGAGGCTCCAAGCCTCAAAGTGCCCGCAGAGCCCACCTTGAGGGTTTTGCTAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
CDS-3UTR CCA 90 bp ACTAGCAAAACCCTCAAGGTGGGCTCTGCGGGCACTTTGAGGCTTGGAGCCTCCGTGCCCAGGGGCCTTTaGTCTCCAGGCTCCTTGCTC +
Preference number: 4 (lower is better)
Translates to: TSKTLKVGSAGTLRLGASVPRGL*SPGSLL
Trigger: GAGCAAGGAGCCTGGAGACCAAAGGCCCCTGGGCAC...GGAGGCTCCAAGCCTCAAAGTGCCCGCAGAGCCCACCTTGAGGGTTTTGCTAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
CDS-3UTR TCA 90 bp TGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGGGCCTGTTGGCAGTGGGGCAGCTaGCGCAGGGTAGCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: WVPVILERCGQRDVIWACWQWGS*RRVARV
Trigger: CACCCTGGCTACCCTGCGTCAGCTGCCCCACTGCCA...ACAGGCCCAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGCACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR TCA 90 bp GACCATAAGGTCCAATCAGTGGATGCTAGTGGGCCCTGGGGCGGGATTATGTGCGCGGGATCAGCAGCTTaGAGAGAGGGTGGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: DHKVQSVDASGPWGGIMCAGSAA*REGGSG
Trigger: CCCACTGCCACCCTCTCTTCAAGCTGCTGATCCCGC...GCACATAATCCCGCCCCAGGGCCCACTAGCATCCACTGATTGGACCTTATGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380183.9
CDS-3UTR TCA 90 bp GACCATAAGGTCCAATCAGTGGATGCTAGTGGGCCCTGGGGCGGGATTATGTGCCCCGGGCGAGTGTGTTaGTGTGCAGGGTGTATCGGG +
Preference number: 4 (lower is better)
Translates to: DHKVQSVDASGPWGGIMCPGRVC*CAGCIG
Trigger: CCCGATACACCCTGCACATCAACACACTCGCCCGGG...GCACATAATCCCGCCCCAGGGCCCACTAGCATCCACTGATTGGACCTTATGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380183.9
CDS-3UTR GCA 90 bp CTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGGGCCTGTTGGCTGTACCCTCCTaGAGCACCAGGGTCCCCGCC +
Preference number: 4 (lower is better)
Translates to: LGASYPRAMWSKGCHLGLLAVPS*STRVPA
Trigger: GGCGGGGACCCTGGTGCTGCAGGAGGGTACAGCCAA...CAGGCCCAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGCACCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR GCA 90 bp GAGTTGGGTGACCATAAGGTCCAATCAGTGGATGCTAGTGGGCCCTGGGGCGGGTTCTCTAGCTCAGCCTaGAAGCTGGTCCCAGGACCC +
Preference number: 4 (lower is better)
Translates to: ELGDHKVQSVDASGPWGGFSSSA*KLVPGP
Trigger: GGGTCCTGGGACCAGCTTGCAGGCTGAGCTAGAGAA...CCCGCCCCAGGGCCCACTAGCATCCACTGATTGGACCTTATGGTCACCCAACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
CDS-3UTR GCA 90 bp ACTAGCAAAACCCTCAAGGTGGGCTCTGCGGGCACTTTGAGGCTTGGAGCCTCCGAAGCCCTCGCATGTTaGCAGGCCTTTGGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: TSKTLKVGSAGTLRLGASEALAC*QAFGGG
Trigger: CCCACCTCCAAAGGCCTGGCAACATGCGAGGGCTTC...GGAGGCTCCAAGCCTCAAAGTGCCCGCAGAGCCCACCTTGAGGGTTTTGCTAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
CDS-3UTR CCA 90 bp TCTGAGGAGTCCTTTTCTCTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGCAGGGGAAGAGGAGGTaGCCGCCCCGCGGCGGTGTC +
Preference number: 4 (lower is better)
Translates to: SEESFSLGASYPRAMWSKQGKRR*PPRGGV
Trigger: GACACCGCCGCGGGGCGGCCACCTCCTCTTCCCCTG...CTTTGACCACATCGCTCTAGGATAACTGGCACCCAGAGAAAAGGACTCCTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CCA 90 bp ACTAGCAAAACCCTCAAGGTGGGCTCTGCGGGCACTTTGAGGCTTGGAGCCTCCTGGAGCACAGGGTGGTaGTCTGCCCAGGACACCTTG +
Preference number: 4 (lower is better)
Translates to: TSKTLKVGSAGTLRLGASWSTGW*SAQDTL
Trigger: CAAGGTGTCCTGGGCAGACCACCACCCTGTGCTCCA...GGAGGCTCCAAGCCTCAAAGTGCCCGCAGAGCCCACCTTGAGGGTTTTGCTAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
CDS-3UTR CCA 90 bp CCTCAAGGTGGGCTCTGCGGGCACTTTGAGGCTTGGAGCCTCCAAAAGACTCAGCCGCAGCCTGGGCTCTaGTATAGCAGGGTCATTGGG +
Preference number: 4 (lower is better)
Translates to: PQGGLCGHFEAWSLQKTQPQPGL*YSRVIG
Trigger: CCCAATGACCCTGCTATACCAGAGCCCAGGCTGCGG...CTGAGTCTTTTGGAGGCTCCAAGCCTCAAAGTGCCCGCAGAGCCCACCTTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
CDS-3UTR CCA 90 bp GTGTGTATGGTGGTGGGGGTGAGTTACAGAGTCTGGTTGTCCCAGGAGAGGCACGTCCACCACCTGCCCTaGCACGATAAGCAGCTCCCG +
Preference number: 4 (lower is better)
Translates to: VCMVVGVSYRVWLSQERHVHHLP*HDKQLP
Trigger: CGGGAGCTGCTTATCGTGCCAGGGCAGGTGGTGGAC...GTGCCTCTCCTGGGACAACCAGACTCTGTAACTCACCCCCACCACCATACACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380183.9
ENST00000572022.5
CDS-3UTR TCA 90 bp CCTCAAGGTGGGCTCTGCGGGCACTTTGAGGCTTGGAGCCTCCAAAAGACTCAGGGGTCCCCACGATGCTaGCAGACACTTTGTCCCATG +
Preference number: 4 (lower is better)
Translates to: PQGGLCGHFEAWSLQKTQGSPRC*QTLCPM
Trigger: CATGGGACAAAGTGTCTGTCAGCATCGTGGGGACCC...CTGAGTCTTTTGGAGGCTCCAAGCCTCAAAGTGCCCGCAGAGCCCACCTTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
CDS-3UTR TCA 90 bp GACCATAAGGTCCAATCAGTGGATGCTAGTGGGCCCTGGGGCGGGATTATGTGCAGTGCAGCAGGTGCGTaGGGGCCTCATGGAAGGAGA +
Preference number: 4 (lower is better)
Translates to: DHKVQSVDASGPWGGIMCSAAGA*GPHGRR
Trigger: TCTCCTTCCATGAGGCCCTCACGCACCTGCTGCACT...GCACATAATCCCGCCCCAGGGCCCACTAGCATCCACTGATTGGACCTTATGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
CDS-3UTR TCA 90 bp GTGTGTATGGTGGTGGGGGTGAGTTACAGAGTCTGGTTGTCCCAGGAGAGGCACCTCAGGCAGCAGATGTaGGTGCAGCAGGTGCGTGAG +
Preference number: 4 (lower is better)
Translates to: VCMVVGVSYRVWLSQERHLRQQM*VQQVRE
Trigger: CTCACGCACCTGCTGCACTCACATCTGCTGCCTGAG...GTGCCTCTCCTGGGACAACCAGACTCTGTAACTCACCCCCACCACCATACACAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR TCA 90 bp GTCCTTGAGTTGGGTGACCATAAGGTCCAATCAGTGGATGCTAGTGGGCCCTGGCAAACTGCCCTGCACTaGCAGCCGCATGCTTGGCGG +
Preference number: 4 (lower is better)
Translates to: VLELGDHKVQSVDASGPWQTALH*QPHAWR
Trigger: CCGCCAAGCATGCGGCTGTCAGTGCAGGGCAGTTTG...CCAGGGCCCACTAGCATCCACTGATTGGACCTTATGGTCACCCAACTCAAGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
CDS-3UTR TCA 90 bp CTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGGGCCTGCAAACTGCCCTGCACTaGCAGCCGCATGCTTGGCGG +
Preference number: 4 (lower is better)
Translates to: LGASYPRAMWSKGCHLGLQTALH*QPHAWR
Trigger: CCGCCAAGCATGCGGCTGTCAGTGCAGGGCAGTTTG...CAGGCCCAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGCACCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR TCA 90 bp GTGTGTATGGTGGTGGGGGTGAGTTACAGAGTCTGGTTGTCCCAGGAGAGGCACGTGGGAGGGTGGCTATaGAGCCCTCGCATGTTGCCA +
Preference number: 4 (lower is better)
Translates to: VCMVVGVSYRVWLSQERHVGGWL*SPRMLP
Trigger: TGGCAACATGCGAGGGCTTCATAGCCACCCTCCCAC...GTGCCTCTCCTGGGACAACCAGACTCTGTAACTCACCCCCACCACCATACACAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR TCA 90 bp GTGTGTATGGTGGTGGGGGTGAGTTACAGAGTCTGGTTGTCCCAGGAGAGGCACCGATGCCTGTGGACTTaGAGAGAGGGTGGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: VCMVVGVSYRVWLSQERHRCLWT*REGGSG
Trigger: CCCACTGCCACCCTCTCTTCAAGTCCACAGGCATCG...GTGCCTCTCCTGGGACAACCAGACTCTGTAACTCACCCCCACCACCATACACAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380173.6
CDS-3UTR GCA 90 bp GACCATAAGGTCCAATCAGTGGATGCTAGTGGGCCCTGGGGCGGGATTATGTGCCACAGGGTGGTGGTCTaGCCAGGACACCTTGGCTGT +
Preference number: 4 (lower is better)
Translates to: DHKVQSVDASGPWGGIMCHRVVV*PGHLGC
Trigger: ACAGCCAAGGTGTCCTGGGCAGACCACCACCCTGTG...GCACATAATCCCGCCCCAGGGCCCACTAGCATCCACTGATTGGACCTTATGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
CDS-3UTR GCA 90 bp CCTCAAGGTGGGCTCTGCGGGCACTTTGAGGCTTGGAGCCTCCAAAAGACTCAGTTCTCTAGCTCAGCCTaGAAGCTGGTCCCAGGACCC +
Preference number: 4 (lower is better)
Translates to: PQGGLCGHFEAWSLQKTQFSSSA*KLVPGP
Trigger: GGGTCCTGGGACCAGCTTGCAGGCTGAGCTAGAGAA...CTGAGTCTTTTGGAGGCTCCAAGCCTCAAAGTGCCCGCAGAGCCCACCTTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
CDS-3UTR GCA 90 bp GAGTTGGGTGACCATAAGGTCCAATCAGTGGATGCTAGTGGGCCCTGGGGCGGGGCGAGTGTGTTGATGTaGAGGGTGTATCGGGTGTGC +
Preference number: 4 (lower is better)
Translates to: ELGDHKVQSVDASGPWGGASVLM*RVYRVC
Trigger: GCACACCCGATACACCCTGCACATCAACACACTCGC...CCCGCCCCAGGGCCCACTAGCATCCACTGATTGGACCTTATGGTCACCCAACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380183.9
CDS-3UTR CCA 90 bp GCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGGGCCTGTGTTCCTCCGGGAGCGTCACCTaGAAGTCCTCCTCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: ASYPRAMWSKGCHLGLCSSGSVT*KSSSAP
Trigger: GGGCGCTGAGGAGGACTTCCAGGTGACGCTCCCGGA...GGAACACAGGCCCAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CCA 90 bp GAGTTGGGTGACCATAAGGTCCAATCAGTGGATGCTAGTGGGCCCTGGGGCGGGGCAGTGAGGCCAACCTaGGTTGTAAGCCTTCCACTG +
Preference number: 4 (lower is better)
Translates to: ELGDHKVQSVDASGPWGGAVRPT*VVSLPL
Trigger: CAGTGGAAGGCTTACAACCCAGGTTGGCCTCACTGC...CCCGCCCCAGGGCCCACTAGCATCCACTGATTGGACCTTATGGTCACCCAACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
CDS-3UTR CCA 90 bp CCTCAAGGTGGGCTCTGCGGGCACTTTGAGGCTTGGAGCCTCCAAAAGACTCAGTGCGTGCTCAGCTGCTaGGGTCCTCCGGAAGTTGAA +
Preference number: 4 (lower is better)
Translates to: PQGGLCGHFEAWSLQKTQCVLSC*GPPEVE
Trigger: TTCAACTTCCGGAGGACCCCAGCAGCTGAGCACGCA...CTGAGTCTTTTGGAGGCTCCAAGCCTCAAAGTGCCCGCAGAGCCCACCTTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
CDS-3UTR CCA 90 bp GTGTGTATGGTGGTGGGGGTGAGTTACAGAGTCTGGTTGTCCCAGGAGAGGCACGCTCAGCCTGCAAGCTaGTCCCAGGACCCAACACTG +
Preference number: 4 (lower is better)
Translates to: VCMVVGVSYRVWLSQERHAQPAS*SQDPTL
Trigger: CAGTGTTGGGTCCTGGGACCAGCTTGCAGGCTGAGC...GTGCCTCTCCTGGGACAACCAGACTCTGTAACTCACCCCCACCACCATACACAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CCA 90 bp GAGTTGGGTGACCATAAGGTCCAATCAGTGGATGCTAGTGGGCCCTGGGGCGGGCAAAGGGATGTCATCTaGGCCTGTGTTCCCCTGGGA +
Preference number: 4 (lower is better)
Translates to: ELGDHKVQSVDASGPWGGQRDVI*ACVPLG
Trigger: TCCCAGGGGAACACAGGCCCAGATGACATCCCTTTG...CCCGCCCCAGGGCCCACTAGCATCCACTGATTGGACCTTATGGTCACCCAACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
CDS-3UTR CCA 90 bp ACTAGCAAAACCCTCAAGGTGGGCTCTGCGGGCACTTTGAGGCTTGGAGCCTCCTGCGCCCAGTCTCTTTaGCAGCCACTTCTTGGTGGC +
Preference number: 4 (lower is better)
Translates to: TSKTLKVGSAGTLRLGASCAQSL*QPLLGG
Trigger: GCCACCAAGAAGTGGCTGCCAAAGAGACTGGGCGCA...GGAGGCTCCAAGCCTCAAAGTGCCCGCAGAGCCCACCTTGAGGGTTTTGCTAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
CDS-3UTR TCA 90 bp CTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGGGCCTGCCCAGGACCCAACACTaGGGCCACCATGGCATCAGT +
Preference number: 4 (lower is better)
Translates to: LGASYPRAMWSKGCHLGLPRTQH*GHHGIS
Trigger: ACTGATGCCATGGTGGCCTCAGTGTTGGGTCCTGGG...CAGGCCCAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGCACCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR TCA 90 bp GACCATAAGGTCCAATCAGTGGATGCTAGTGGGCCCTGGGGCGGGATTATGTGCCCAGAGAGGATGCCGTaGTCCACCAAGAACAGGGAG +
Preference number: 4 (lower is better)
Translates to: DHKVQSVDASGPWGGIMCPERMP*STKNRE
Trigger: CTCCCTGTTCTTGGTGGATCACGGCATCCTCTCTGG...GCACATAATCCCGCCCCAGGGCCCACTAGCATCCACTGATTGGACCTTATGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
CDS-3UTR TCA 90 bp GTGTGTATGGTGGTGGGGGTGAGTTACAGAGTCTGGTTGTCCCAGGAGAGGCACCCAGAGAGGATGCCGTaGTCCACCAAGAACAGGGAG +
Preference number: 4 (lower is better)
Translates to: VCMVVGVSYRVWLSQERHPERMP*STKNRE
Trigger: CTCCCTGTTCTTGGTGGATCACGGCATCCTCTCTGG...GTGCCTCTCCTGGGACAACCAGACTCTGTAACTCACCCCCACCACCATACACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR TCA 90 bp GCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGGGCCTGTGTTCCCCCGGGCGAGTGTGTTaGTGTGCAGGGTGTATCGGG +
Preference number: 4 (lower is better)
Translates to: ASYPRAMWSKGCHLGLCSPGRVC*CAGCIG
Trigger: CCCGATACACCCTGCACATCAACACACTCGCCCGGG...GGAACACAGGCCCAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380183.9
ENST00000572022.5
CDS-3UTR GCA 90 bp CCTCAAGGTGGGCTCTGCGGGCACTTTGAGGCTTGGAGCCTCCAAAAGACTCAGACACTTTGTCCCATGTaGCAGCCCCGAAGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: PQGGLCGHFEAWSLQKTQTLCPM*QPRRLL
Trigger: GAGAAGCCTTCGGGGCTGGCACATGGGACAAAGTGT...CTGAGTCTTTTGGAGGCTCCAAGCCTCAAAGTGCCCGCAGAGCCCACCTTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
CDS-3UTR GCA 90 bp GACCATAAGGTCCAATCAGTGGATGCTAGTGGGCCCTGGGGCGGGATTATGTGCCTGCCAGTGCTCAAATaGGTGCTCAGCTGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: DHKVQSVDASGPWGGIMCLPVLK*VLSCWG
Trigger: ACCCCAGCAGCTGAGCACGCATTTGAGCACTGGCAG...GCACATAATCCCGCCCCAGGGCCCACTAGCATCCACTGATTGGACCTTATGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
CDS-3UTR GCA 90 bp GTGTGTATGGTGGTGGGGGTGAGTTACAGAGTCTGGTTGTCCCAGGAGAGGCACCTGCCAGTGCTCAAATaGGTGCTCAGCTGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: VCMVVGVSYRVWLSQERHLPVLK*VLSCWG
Trigger: ACCCCAGCAGCTGAGCACGCATTTGAGCACTGGCAG...GTGCCTCTCCTGGGACAACCAGACTCTGTAACTCACCCCCACCACCATACACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR GCA 90 bp ACTAGCAAAACCCTCAAGGTGGGCTCTGCGGGCACTTTGAGGCTTGGAGCCTCCAAGAAGGCGTCCTCCTaGCAGTGCTCAAATGCGTGC +
Preference number: 4 (lower is better)
Translates to: TSKTLKVGSAGTLRLGASKKASS*QCSNAC
Trigger: GCACGCATTTGAGCACTGGCAGGAGGACGCCTTCTT...GGAGGCTCCAAGCCTCAAAGTGCCCGCAGAGCCCACCTTGAGGGTTTTGCTAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
CDS-3UTR GCA 90 bp GTGTGTATGGTGGTGGGGGTGAGTTACAGAGTCTGGTTGTCCCAGGAGAGGCACTGTGAGTGCAGCAGGTaGGTGAGGGCCTCATGGAAG +
Preference number: 4 (lower is better)
Translates to: VCMVVGVSYRVWLSQERHCECSR*VRASWK
Trigger: CTTCCATGAGGCCCTCACGCACCTGCTGCACTCACA...GTGCCTCTCCTGGGACAACCAGACTCTGTAACTCACCCCCACCACCATACACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR GCA 90 bp TGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGGGCCTGTGTGGTGGCAGCTGCATaGTGGGTGGCAGGTTGGGCA +
Preference number: 4 (lower is better)
Translates to: WVPVILERCGQRDVIWACVVAAA*WVAGWA
Trigger: TGCCCAACCTGCCACCCAGCATGCAGCTGCCACCAC...ACAGGCCCAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGCACCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR GCA 90 bp GTCCTTGAGTTGGGTGACCATAAGGTCCAATCAGTGGATGCTAGTGGGCCCTGGGAAGCCCTCGCATGTTaGCAGGCCTTTGGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: VLELGDHKVQSVDASGPWEALAC*QAFGGG
Trigger: CCCACCTCCAAAGGCCTGGCAACATGCGAGGGCTTC...CCAGGGCCCACTAGCATCCACTGATTGGACCTTATGGTCACCCAACTCAAGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
CDS-3UTR CCA 90 bp GTCCTTGAGTTGGGTGACCATAAGGTCCAATCAGTGGATGCTAGTGGGCCCTGGTGGAGCACAGGGTGGTaGTCTGCCCAGGACACCTTG +
Preference number: 4 (lower is better)
Translates to: VLELGDHKVQSVDASGPWWSTGW*SAQDTL
Trigger: CAAGGTGTCCTGGGCAGACCACCACCCTGTGCTCCA...CCAGGGCCCACTAGCATCCACTGATTGGACCTTATGGTCACCCAACTCAAGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
CDS-3UTR CCA 90 bp GTGTGTATGGTGGTGGGGGTGAGTTACAGAGTCTGGTTGTCCCAGGAGAGGCACTGCGTGCTCAGCTGCTaGGGTCCTCCGGAAGTTGAA +
Preference number: 4 (lower is better)
Translates to: VCMVVGVSYRVWLSQERHCVLSC*GPPEVE
Trigger: TTCAACTTCCGGAGGACCCCAGCAGCTGAGCACGCA...GTGCCTCTCCTGGGACAACCAGACTCTGTAACTCACCCCCACCACCATACACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CCA 90 bp CCTCAAGGTGGGCTCTGCGGGCACTTTGAGGCTTGGAGCCTCCAAAAGACTCAGAGACCATTCAGGAACTaGGAGGCGAAGAAGGCGTCC +
Preference number: 4 (lower is better)
Translates to: PQGGLCGHFEAWSLQKTQRPFRN*EAKKAS
Trigger: GGACGCCTTCTTCGCCTCCCAGTTCCTGAATGGTCT...CTGAGTCTTTTGGAGGCTCCAAGCCTCAAAGTGCCCGCAGAGCCCACCTTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
CDS-3UTR CCA 90 bp CTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGGGCCTGGCTCAGCCTGCAAGCTaGTCCCAGGACCCAACACTG +
Preference number: 4 (lower is better)
Translates to: LGASYPRAMWSKGCHLGLAQPAS*SQDPTL
Trigger: CAGTGTTGGGTCCTGGGACCAGCTTGCAGGCTGAGC...CAGGCCCAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGCACCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CCA 90 bp TGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGGGCCTGTTTTGGGCCGGGGGTCTaGCTGAGCTGGATGGCGAGA +
Preference number: 4 (lower is better)
Translates to: WVPVILERCGQRDVIWACFGPGV*LSWMAR
Trigger: TCTCGCCATCCAGCTCAGCCAGACCCCCGGCCCAAA...ACAGGCCCAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGCACCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CCA 90 bp ACTAGCAAAACCCTCAAGGTGGGCTCTGCGGGCACTTTGAGGCTTGGAGCCTCCTGCGTGAGGGCCTCATaGAAGGAGAACTCGGCATTG +
Preference number: 4 (lower is better)
Translates to: TSKTLKVGSAGTLRLGASCVRAS*KENSAL
Trigger: CAATGCCGAGTTCTCCTTCCATGAGGCCCTCACGCA...GGAGGCTCCAAGCCTCAAAGTGCCCGCAGAGCCCACCTTGAGGGTTTTGCTAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
CDS-3UTR CCA 90 bp CCTCAAGGTGGGCTCTGCGGGCACTTTGAGGCTTGGAGCCTCCAAAAGACTCAGTCTCTGACCCAGGCCTaGAGCTCTCTGTCATCTTGG +
Preference number: 4 (lower is better)
Translates to: PQGGLCGHFEAWSLQKTQSLTQA*SSLSSW
Trigger: CCAAGATGACAGAGAGCTCCAGGCCTGGGTCAGAGA...CTGAGTCTTTTGGAGGCTCCAAGCCTCAAAGTGCCCGCAGAGCCCACCTTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
CDS-3UTR CCA 90 bp CTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGGGCCTGTTTGGAGGTGGGTGGTaGCAGCTGCATGCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: LGASYPRAMWSKGCHLGLFGGGW*QLHAGW
Trigger: CCACCCAGCATGCAGCTGCCACCACCCACCTCCAAA...CAGGCCCAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGCACCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CCA 90 bp GCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGGGCCTGTGTTCCGTGCCCAGGGGCCTTTaGTCTCCAGGCTCCTTGCTC +
Preference number: 4 (lower is better)
Translates to: ASYPRAMWSKGCHLGLCSVPRGL*SPGSLL
Trigger: GAGCAAGGAGCCTGGAGACCAAAGGCCCCTGGGCAC...GGAACACAGGCCCAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR TCA 90 bp CTCTTTGGCAGCCACTTCTTGGTGGCTGTCCTTGAGTTGGGTGACCATAAGGTCAGTGCAGCAGGTGCGTaGGGGCCTCATGGAAGGAGA +
Preference number: 4 (lower is better)
Translates to: LFGSHFLVAVLELGDHKVSAAGA*GPHGRR
Trigger: TCTCCTTCCATGAGGCCCTCACGCACCTGCTGCACT...GACCTTATGGTCACCCAACTCAAGGACAGCCACCAAGAAGTGGCTGCCAAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
CDS-3UTR TCA 90 bp TGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGGGCCTGTAGTGCAGCAGGTGCGTaGGGGCCTCATGGAAGGAGA +
Preference number: 4 (lower is better)
Translates to: WVPVILERCGQRDVIWACSAAGA*GPHGRR
Trigger: TCTCCTTCCATGAGGCCCTCACGCACCTGCTGCACT...ACAGGCCCAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGCACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR TCA 90 bp GCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGGGCCTGTGTTCCGTGGGAGGGTGGCTATaGAGCCCTCGCATGTTGCCA +
Preference number: 4 (lower is better)
Translates to: ASYPRAMWSKGCHLGLCSVGGWL*SPRMLP
Trigger: TGGCAACATGCGAGGGCTTCATAGCCACCCTCCCAC...GGAACACAGGCCCAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR TCA 90 bp GTGTGTATGGTGGTGGGGGTGAGTTACAGAGTCTGGTTGTCCCAGGAGAGGCACCATCACATGTGGCATTaGCAGGTGGGAGGGTGGCTA +
Preference number: 4 (lower is better)
Translates to: VCMVVGVSYRVWLSQERHHHMWH*QVGGWL
Trigger: TAGCCACCCTCCCACCTGTCAATGCCACATGTGATG...GTGCCTCTCCTGGGACAACCAGACTCTGTAACTCACCCCCACCACCATACACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR TCA 90 bp CTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGGGCCTGGCTCTGCGGGCACTTTaGGGCTTGGAGCCTCCAAAA +
Preference number: 4 (lower is better)
Translates to: LGASYPRAMWSKGCHLGLALRAL*GLEPPK
Trigger: TTTTGGAGGCTCCAAGCCTCAAAGTGCCCGCAGAGC...CAGGCCCAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGCACCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR GCA 90 bp CTCTTTGGCAGCCACTTCTTGGTGGCTGTCCTTGAGTTGGGTGACCATAAGGTCCACAGGGTGGTGGTCTaGCCAGGACACCTTGGCTGT +
Preference number: 4 (lower is better)
Translates to: LFGSHFLVAVLELGDHKVHRVVV*PGHLGC
Trigger: ACAGCCAAGGTGTCCTGGGCAGACCACCACCCTGTG...GACCTTATGGTCACCCAACTCAAGGACAGCCACCAAGAAGTGGCTGCCAAAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
CDS-3UTR GCA 90 bp GCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGGGCCTGTGTTCCCACAGGGTGGTGGTCTaGCCAGGACACCTTGGCTGT +
Preference number: 4 (lower is better)
Translates to: ASYPRAMWSKGCHLGLCSHRVVV*PGHLGC
Trigger: ACAGCCAAGGTGTCCTGGGCAGACCACCACCCTGTG...GGAACACAGGCCCAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR GCA 90 bp CTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGGGCCTGGCGTCCTCCTGCCAGTaGTCAAATGCGTGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: LGASYPRAMWSKGCHLGLASSCQ*SNACSA
Trigger: AGCTGAGCACGCATTTGAGCACTGGCAGGAGGACGC...CAGGCCCAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGCACCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR GCA 90 bp ACTAGCAAAACCCTCAAGGTGGGCTCTGCGGGCACTTTGAGGCTTGGAGCCTCCGGATGCCAGAGAGGATaGCGTGATCCACCAAGAACA +
Preference number: 4 (lower is better)
Translates to: TSKTLKVGSAGTLRLGASGCQRG*RDPPRT
Trigger: TGTTCTTGGTGGATCACGGCATCCTCTCTGGCATCC...GGAGGCTCCAAGCCTCAAAGTGCCCGCAGAGCCCACCTTGAGGGTTTTGCTAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
CDS-3UTR GCA 90 bp GCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGGGCCTGTGTTCCGACCTGTCCACCACCTaGCCTGGCACGATAAGCAGC +
Preference number: 4 (lower is better)
Translates to: ASYPRAMWSKGCHLGLCSDLSTT*PGTISS
Trigger: GCTGCTTATCGTGCCAGGGCAGGTGGTGGACAGGTC...GGAACACAGGCCCAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380183.9
ENST00000572022.5
CDS-3UTR GCA 90 bp GTGTGTATGGTGGTGGGGGTGAGTTACAGAGTCTGGTTGTCCCAGGAGAGGCACAGCCTTCAATGCCGATaGCTGTGGACCTGTCCACCA +
Preference number: 4 (lower is better)
Translates to: VCMVVGVSYRVWLSQERHSLQCR*LWTCPP
Trigger: TGGTGGACAGGTCCACAGGCATCGGCATTGAAGGCT...GTGCCTCTCCTGGGACAACCAGACTCTGTAACTCACCCCCACCACCATACACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380183.9
ENST00000572022.5
CDS-3UTR GCA 90 bp CTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGGGCCTGGCACTGACAGCCGCATaGTTGGCGGAGCAGGTGAAT +
Preference number: 4 (lower is better)
Translates to: LGASYPRAMWSKGCHLGLALTAA*LAEQVN
Trigger: ATTCACCTGCTCCGCCAAGCATGCGGCTGTCAGTGC...CAGGCCCAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGCACCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR GCA 90 bp TGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGGGCCTGTGAAGCCCTCGCATGTTaGCAGGCCTTTGGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: WVPVILERCGQRDVIWACEALAC*QAFGGG
Trigger: CCCACCTCCAAAGGCCTGGCAACATGCGAGGGCTTC...ACAGGCCCAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGCACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR GCA 90 bp GTGTGTATGGTGGTGGGGGTGAGTTACAGAGTCTGGTTGTCCCAGGAGAGGCACGGTCTCCAGGCTCCTTaGTCAGCAACCAGAGAGCAA +
Preference number: 4 (lower is better)
Translates to: VCMVVGVSYRVWLSQERHGLQAP*SATREQ
Trigger: TTGCTCTCTGGTTGCTGAGCAAGGAGCCTGGAGACC...GTGCCTCTCCTGGGACAACCAGACTCTGTAACTCACCCCCACCACCATACACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR GCA 90 bp CTCTTTGGCAGCCACTTCTTGGTGGCTGTCCTTGAGTTGGGTGACCATAAGGTCGCTCATCCGGATAGGTaGCCAGGGGCCTTTGGTCTC +
Preference number: 4 (lower is better)
Translates to: LFGSHFLVAVLELGDHKVAHPDR*PGAFGL
Trigger: GAGACCAAAGGCCCCTGGGCACCTATCCGGATGAGC...GACCTTATGGTCACCCAACTCAAGGACAGCCACCAAGAAGTGGCTGCCAAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
CDS-3UTR GCA 90 bp GCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGGGCCTGTGTTCCGCTCATCCGGATAGGTaGCCAGGGGCCTTTGGTCTC +
Preference number: 4 (lower is better)
Translates to: ASYPRAMWSKGCHLGLCSAHPDR*PGAFGL
Trigger: GAGACCAAAGGCCCCTGGGCACCTATCCGGATGAGC...GGAACACAGGCCCAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR GCA 90 bp TCTGAGGAGTCCTTTTCTCTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGTCTGGAAGGTGGCGATaGTCCGCCGAGGGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: SEESFSLGASYPRAMWSKSGRWR*SAEGPP
Trigger: AGGAGGCCCCTCGGCGGAGCATCGCCACCTTCCAGA...CTTTGACCACATCGCTCTAGGATAACTGGCACCCAGAGAAAAGGACTCCTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CCA 90 bp GTGTGTATGGTGGTGGGGGTGAGTTACAGAGTCTGGTTGTCCCAGGAGAGGCACCCCCTGGGACACGCCTaGTTATTGCCCCTGGTTATT +
Preference number: 4 (lower is better)
Translates to: VCMVVGVSYRVWLSQERHPLGHA*LLPLVI
Trigger: AATAACCAGGGGCAATAACCAGGCGTGTCCCAGGGG...GTGCCTCTCCTGGGACAACCAGACTCTGTAACTCACCCCCACCACCATACACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CCA 90 bp TCTGAGGAGTCCTTTTCTCTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGCGCGGCGGTGTCAGCTaGAACCAGCGGCAGAACCAG +
Preference number: 4 (lower is better)
Translates to: SEESFSLGASYPRAMWSKRGGVS*NQRQNQ
Trigger: CTGGTTCTGCCGCTGGTTCCAGCTGACACCGCCGCG...CTTTGACCACATCGCTCTAGGATAACTGGCACCCAGAGAAAAGGACTCCTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CCA 90 bp TGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGGGCCTGTTGGAGCACAGGGTGGTaGTCTGCCCAGGACACCTTG +
Preference number: 4 (lower is better)
Translates to: WVPVILERCGQRDVIWACWSTGW*SAQDTL
Trigger: CAAGGTGTCCTGGGCAGACCACCACCCTGTGCTCCA...ACAGGCCCAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGCACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CCA 90 bp GTGTGTATGGTGGTGGGGGTGAGTTACAGAGTCTGGTTGTCCCAGGAGAGGCACAGACCATTCAGGAACTaGGAGGCGAAGAAGGCGTCC +
Preference number: 4 (lower is better)
Translates to: VCMVVGVSYRVWLSQERHRPFRN*EAKKAS
Trigger: GGACGCCTTCTTCGCCTCCCAGTTCCTGAATGGTCT...GTGCCTCTCCTGGGACAACCAGACTCTGTAACTCACCCCCACCACCATACACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CCA 90 bp CTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGGGCCTGGACGGGGAAGTTCTTTaGGAGGTAGTGACAGCGGCG +
Preference number: 4 (lower is better)
Translates to: LGASYPRAMWSKGCHLGLDGEVL*EVVTAA
Trigger: CGCCGCTGTCACTACCTCCCAAAGAACTTCCCCGTC...CAGGCCCAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGCACCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CCA 90 bp GTGTGTATGGTGGTGGGGGTGAGTTACAGAGTCTGGTTGTCCCAGGAGAGGCACCCCACTTGTCATCAGTaGGCAGGAAGATGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: VCMVVGVSYRVWLSQERHPTCHQ*AGRWGC
Trigger: ACAGCCCCATCTTCCTGCCCACTGATGACAAGTGGG...GTGCCTCTCCTGGGACAACCAGACTCTGTAACTCACCCCCACCACCATACACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CCA 90 bp GACCATAAGGTCCAATCAGTGGATGCTAGTGGGCCCTGGGGCGGGATTATGTGCTGCGTGAGGGCCTCATaGAAGGAGAACTCGGCATTG +
Preference number: 4 (lower is better)
Translates to: DHKVQSVDASGPWGGIMCCVRAS*KENSAL
Trigger: CAATGCCGAGTTCTCCTTCCATGAGGCCCTCACGCA...GCACATAATCCCGCCCCAGGGCCCACTAGCATCCACTGATTGGACCTTATGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
CDS-3UTR CCA 90 bp GTGTGTATGGTGGTGGGGGTGAGTTACAGAGTCTGGTTGTCCCAGGAGAGGCACGGGCCTGTGTTCCCCTaGGATTTAGATGGAGACGCT +
Preference number: 4 (lower is better)
Translates to: VCMVVGVSYRVWLSQERHGPVFP*DLDGDA
Trigger: AGCGTCTCCATCTAAATCCCAGGGGAACACAGGCCC...GTGCCTCTCCTGGGACAACCAGACTCTGTAACTCACCCCCACCACCATACACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CCA 90 bp ACTAGCAAAACCCTCAAGGTGGGCTCTGCGGGCACTTTGAGGCTTGGAGCCTCCATAAGGTCCAATCAGTaGATGCTAGTGGGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: TSKTLKVGSAGTLRLGASIRSNQ*MLVGPG
Trigger: CCCAGGGCCCACTAGCATCCACTGATTGGACCTTAT...GGAGGCTCCAAGCCTCAAAGTGCCCGCAGAGCCCACCTTGAGGGTTTTGCTAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
CDS-3UTR TCA 90 bp GCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGGGCCTGTGTTCCGGGTCCCCACGATGCTaGCAGACACTTTGTCCCATG +
Preference number: 4 (lower is better)
Translates to: ASYPRAMWSKGCHLGLCSGSPRC*QTLCPM
Trigger: CATGGGACAAAGTGTCTGTCAGCATCGTGGGGACCC...GGAACACAGGCCCAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR TCA 90 bp CTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGGGCCTGCCACCATGGCATCAGTaGCGGGGAAGTTCTTTGGGA +
Preference number: 4 (lower is better)
Translates to: LGASYPRAMWSKGCHLGLPPWHQ*RGSSLG
Trigger: TCCCAAAGAACTTCCCCGTCACTGATGCCATGGTGG...CAGGCCCAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGCACCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR TCA 90 bp TCTGAGGAGTCCTTTTCTCTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGCGGGATCAGCAGCTTaGAGAGAGGGTGGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: SEESFSLGASYPRAMWSKAGSAA*REGGSG
Trigger: CCCACTGCCACCCTCTCTTCAAGCTGCTGATCCCGC...CTTTGACCACATCGCTCTAGGATAACTGGCACCCAGAGAAAAGGACTCCTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380183.9
ENST00000572022.5
CDS-3UTR TCA 90 bp TGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGGGCCTGTGCTCTGCGGGCACTTTaGGGCTTGGAGCCTCCAAAA +
Preference number: 4 (lower is better)
Translates to: WVPVILERCGQRDVIWACALRAL*GLEPPK
Trigger: TTTTGGAGGCTCCAAGCCTCAAAGTGCCCGCAGAGC...ACAGGCCCAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGCACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR GCA 90 bp CTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGGGCCTGACACTTTGTCCCATGTaGCAGCCCCGAAGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: LGASYPRAMWSKGCHLGLTLCPM*QPRRLL
Trigger: GAGAAGCCTTCGGGGCTGGCACATGGGACAAAGTGT...CAGGCCCAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGCACCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR GCA 90 bp CTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGGGCCTGAAATGCGTGCTCAGCTaGTGGGGTCCTCCGGAAGTT +
Preference number: 4 (lower is better)
Translates to: LGASYPRAMWSKGCHLGLKCVLS*WGPPEV
Trigger: AACTTCCGGAGGACCCCAGCAGCTGAGCACGCATTT...CAGGCCCAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGCACCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR GCA 90 bp GCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGGGCCTGTGTTCCCTGCCAGTGCTCAAATaGGTGCTCAGCTGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: ASYPRAMWSKGCHLGLCSLPVLK*VLSCWG
Trigger: ACCCCAGCAGCTGAGCACGCATTTGAGCACTGGCAG...GGAACACAGGCCCAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR GCA 90 bp CTCTTTGGCAGCCACTTCTTGGTGGCTGTCCTTGAGTTGGGTGACCATAAGGTCGCGTCCTCCTGCCAGTaGTCAAATGCGTGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: LFGSHFLVAVLELGDHKVASSCQ*SNACSA
Trigger: AGCTGAGCACGCATTTGAGCACTGGCAGGAGGACGC...GACCTTATGGTCACCCAACTCAAGGACAGCCACCAAGAAGTGGCTGCCAAAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
CDS-3UTR GCA 90 bp GTCCTTGAGTTGGGTGACCATAAGGTCCAATCAGTGGATGCTAGTGGGCCCTGGAAGAAGGCGTCCTCCTaGCAGTGCTCAAATGCGTGC +
Preference number: 4 (lower is better)
Translates to: VLELGDHKVQSVDASGPWKKASS*QCSNAC
Trigger: GCACGCATTTGAGCACTGGCAGGAGGACGCCTTCTT...CCAGGGCCCACTAGCATCCACTGATTGGACCTTATGGTCACCCAACTCAAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
CDS-3UTR GCA 90 bp GACCATAAGGTCCAATCAGTGGATGCTAGTGGGCCCTGGGGCGGGATTATGTGCGGATGCCAGAGAGGATaGCGTGATCCACCAAGAACA +
Preference number: 4 (lower is better)
Translates to: DHKVQSVDASGPWGGIMCGCQRG*RDPPRT
Trigger: TGTTCTTGGTGGATCACGGCATCCTCTCTGGCATCC...GCACATAATCCCGCCCCAGGGCCCACTAGCATCCACTGATTGGACCTTATGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
CDS-3UTR GCA 90 bp GTGTGTATGGTGGTGGGGGTGAGTTACAGAGTCTGGTTGTCCCAGGAGAGGCACGGATGCCAGAGAGGATaGCGTGATCCACCAAGAACA +
Preference number: 4 (lower is better)
Translates to: VCMVVGVSYRVWLSQERHGCQRG*RDPPRT
Trigger: TGTTCTTGGTGGATCACGGCATCCTCTCTGGCATCC...GTGCCTCTCCTGGGACAACCAGACTCTGTAACTCACCCCCACCACCATACACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR GCA 90 bp GTGTGTATGGTGGTGGGGGTGAGTTACAGAGTCTGGTTGTCCCAGGAGAGGCACCAGAGAAGCCTTCAATaGCGATGCCTGTGGACCTGT +
Preference number: 4 (lower is better)
Translates to: VCMVVGVSYRVWLSQERHQRSLQ*RCLWTC
Trigger: ACAGGTCCACAGGCATCGGCATTGAAGGCTTCTCTG...GTGCCTCTCCTGGGACAACCAGACTCTGTAACTCACCCCCACCACCATACACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380183.9
ENST00000572022.5
CDS-3UTR GCA 90 bp TTTTCTCTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGTCTGGAAGGTGGCGATaGTCCGCCGAGGGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: FSLGASYPRAMWSKGCHLSGRWR*SAEGPP
Trigger: AGGAGGCCCCTCGGCGGAGCATCGCCACCTTCCAGA...CAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGCACCCAGAGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR GCA 90 bp ACTAGCAAAACCCTCAAGGTGGGCTCTGCGGGCACTTTGAGGCTTGGAGCCTCCCTCCATCTCCCAAAGTaGTGGGATTATGGGCATGAG +
Preference number: 4 (lower is better)
Translates to: TSKTLKVGSAGTLRLGASLHLPK*WDYGHE
Trigger: CTCATGCCCATAATCCCAGCACTTTGGGAGATGGAG...GGAGGCTCCAAGCCTCAAAGTGCCCGCAGAGCCCACCTTGAGGGTTTTGCTAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
CDS-3UTR CCA 90 bp CTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGGGCCTGCCCCTGGGACACGCCTaGTTATTGCCCCTGGTTATT +
Preference number: 4 (lower is better)
Translates to: LGASYPRAMWSKGCHLGLPLGHA*LLPLVI
Trigger: AATAACCAGGGGCAATAACCAGGCGTGTCCCAGGGG...CAGGCCCAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGCACCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CCA 90 bp TTTTCTCTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGCGCGGCGGTGTCAGCTaGAACCAGCGGCAGAACCAG +
Preference number: 4 (lower is better)
Translates to: FSLGASYPRAMWSKGCHLRGGVS*NQRQNQ
Trigger: CTGGTTCTGCCGCTGGTTCCAGCTGACACCGCCGCG...CAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGCACCCAGAGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CCA 90 bp CTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGGGCCTGAGACCATTCAGGAACTaGGAGGCGAAGAAGGCGTCC +
Preference number: 4 (lower is better)
Translates to: LGASYPRAMWSKGCHLGLRPFRN*EAKKAS
Trigger: GGACGCCTTCTTCGCCTCCCAGTTCCTGAATGGTCT...CAGGCCCAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGCACCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CCA 90 bp TGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGGGCCTGTGACGGGGAAGTTCTTTaGGAGGTAGTGACAGCGGCG +
Preference number: 4 (lower is better)
Translates to: WVPVILERCGQRDVIWACDGEVL*EVVTAA
Trigger: CGCCGCTGTCACTACCTCCCAAAGAACTTCCCCGTC...ACAGGCCCAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGCACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CCA 90 bp CTCTTTGGCAGCCACTTCTTGGTGGCTGTCCTTGAGTTGGGTGACCATAAGGTCGACGGGGAAGTTCTTTaGGAGGTAGTGACAGCGGCG +
Preference number: 4 (lower is better)
Translates to: LFGSHFLVAVLELGDHKVDGEVL*EVVTAA
Trigger: CGCCGCTGTCACTACCTCCCAAAGAACTTCCCCGTC...GACCTTATGGTCACCCAACTCAAGGACAGCCACCAAGAAGTGGCTGCCAAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
CDS-3UTR CCA 90 bp TTTCTGAGGAGTCCTTTTCTCTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAGGGGTCTGGCTGAGCTaGATGGCGAGAGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: FLRSPFLWVPVILERCGQGVWLS*MARGSS
Trigger: GCTGCTGCCTCTCGCCATCCAGCTCAGCCAGACCCC...TTGACCACATCGCTCTAGGATAACTGGCACCCAGAGAAAAGGACTCCTCAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CCA 90 bp GTCCTTGAGTTGGGTGACCATAAGGTCCAATCAGTGGATGCTAGTGGGCCCTGGCCCACTTGTCATCAGTaGGCAGGAAGATGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: VLELGDHKVQSVDASGPWPTCHQ*AGRWGC
Trigger: ACAGCCCCATCTTCCTGCCCACTGATGACAAGTGGG...CCAGGGCCCACTAGCATCCACTGATTGGACCTTATGGTCACCCAACTCAAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
CDS-3UTR CCA 90 bp TGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGGGCCTGTTGCTGGGTGGCAGGTTaGGCATCCAAGCACAGGAGT +
Preference number: 4 (lower is better)
Translates to: WVPVILERCGQRDVIWACCWVAG*ASKHRS
Trigger: ACTCCTGTGCTTGGATGCCCAACCTGCCACCCAGCA...ACAGGCCCAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGCACCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CCA 90 bp CTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGGGCCTGTGTGGCATTGACAGGTaGGAGGGTGGCTATGAAGCC +
Preference number: 4 (lower is better)
Translates to: LGASYPRAMWSKGCHLGLCGIDR*EGGYEA
Trigger: GGCTTCATAGCCACCCTCCCACCTGTCAATGCCACA...CAGGCCCAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGCACCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CCA 90 bp TCTGAGGAGTCCTTTTCTCTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGTGCCCAGGGGCCTTTaGTCTCCAGGCTCCTTGCTC +
Preference number: 4 (lower is better)
Translates to: SEESFSLGASYPRAMWSKVPRGL*SPGSLL
Trigger: GAGCAAGGAGCCTGGAGACCAAAGGCCCCTGGGCAC...CTTTGACCACATCGCTCTAGGATAACTGGCACCCAGAGAAAAGGACTCCTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CCA 90 bp GACCATAAGGTCCAATCAGTGGATGCTAGTGGGCCCTGGGGCGGGATTATGTGCGGGCACTTTGAGGCTTaGAGCCTCCAAAAGACTCAG +
Preference number: 4 (lower is better)
Translates to: DHKVQSVDASGPWGGIMCGHFEA*SLQKTQ
Trigger: CTGAGTCTTTTGGAGGCTCCAAGCCTCAAAGTGCCC...GCACATAATCCCGCCCCAGGGCCCACTAGCATCCACTGATTGGACCTTATGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
CDS-3UTR CCA 90 bp CTCTTTGGCAGCCACTTCTTGGTGGCTGTCCTTGAGTTGGGTGACCATAAGGTCGATGCTAGTGGGCCCTaGGGCGGGATTATGTGCTTC +
Preference number: 4 (lower is better)
Translates to: LFGSHFLVAVLELGDHKVDASGP*GGIMCF
Trigger: GAAGCACATAATCCCGCCCCAGGGCCCACTAGCATC...GACCTTATGGTCACCCAACTCAAGGACAGCCACCAAGAAGTGGCTGCCAAAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
CDS-3UTR CCA 90 bp GTGTGTATGGTGGTGGGGGTGAGTTACAGAGTCTGGTTGTCCCAGGAGAGGCACATAAGGTCCAATCAGTaGATGCTAGTGGGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: VCMVVGVSYRVWLSQERHIRSNQ*MLVGPG
Trigger: CCCAGGGCCCACTAGCATCCACTGATTGGACCTTAT...GTGCCTCTCCTGGGACAACCAGACTCTGTAACTCACCCCCACCACCATACACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
CDS-3UTR TCA 90 bp CCTCAAGGTGGGCTCTGCGGGCACTTTGAGGCTTGGAGCCTCCAAAAGACTCAGGGGTCCTCCGGAAGTTaGAGATCCTTTTCATCTCAT +
Preference number: 4 (lower is better)
Translates to: PQGGLCGHFEAWSLQKTQGSSGS*RSFSSH
Trigger: ATGAGATGAAAAGGATCTTCAACTTCCGGAGGACCC...CTGAGTCTTTTGGAGGCTCCAAGCCTCAAAGTGCCCGCAGAGCCCACCTTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
CDS-3UTR TCA 90 bp GCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGGGCCTGTGTTCCCCACCATGGCATCAGTaGCGGGGAAGTTCTTTGGGA +
Preference number: 4 (lower is better)
Translates to: ASYPRAMWSKGCHLGLCSPPWHQ*RGSSLG
Trigger: TCCCAAAGAACTTCCCCGTCACTGATGCCATGGTGG...GGAACACAGGCCCAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR TCA 90 bp TTTTCTCTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGCAAACTGCCCTGCACTaGCAGCCGCATGCTTGGCGG +
Preference number: 4 (lower is better)
Translates to: FSLGASYPRAMWSKGCHLQTALH*QPHAWR
Trigger: CCGCCAAGCATGCGGCTGTCAGTGCAGGGCAGTTTG...CAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGCACCCAGAGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR TCA 90 bp GCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGGGCCTGTGTTCCCATCACATGTGGCATTaGCAGGTGGGAGGGTGGCTA +
Preference number: 4 (lower is better)
Translates to: ASYPRAMWSKGCHLGLCSHHMWH*QVGGWL
Trigger: TAGCCACCCTCCCACCTGTCAATGCCACATGTGATG...GGAACACAGGCCCAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR TCA 90 bp ACTAGCAAAACCCTCAAGGTGGGCTCTGCGGGCACTTTGAGGCTTGGAGCCTCCCTGGCCTTGAACTTCTaGCCTCAAATGATTTTCCCG +
Preference number: 4 (lower is better)
Translates to: TSKTLKVGSAGTLRLGASLALNF*PQMIFP
Trigger: CGGGAAAATCATTTGAGGTCAGAAGTTCAAGGCCAG...GGAGGCTCCAAGCCTCAAAGTGCCCGCAGAGCCCACCTTGAGGGTTTTGCTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
CDS-3UTR TCA 90 bp GCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGGGCCTGTGTTCCCCTGGTTATTGCCACTaGCTCCAAGCCCAGTGGACT +
Preference number: 4 (lower is better)
Translates to: ASYPRAMWSKGCHLGLCSPGYCH*LQAQWT
Trigger: AGTCCACTGGGCTTGGAGTCAGTGGCAATAACCAGG...GGAACACAGGCCCAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572022.5
CDS-3UTR GCA 90 bp TGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGGGCCTGTAGCCTTCAATGCCGATaGCTGTGGACCTGTCCACCA +
Preference number: 4 (lower is better)
Translates to: WVPVILERCGQRDVIWACSLQCR*LWTCPP
Trigger: TGGTGGACAGGTCCACAGGCATCGGCATTGAAGGCT...ACAGGCCCAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGCACCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380183.9
ENST00000572022.5
CDS-3UTR GCA 90 bp TGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGGGCCTGTGACAAAGCGTTCCACTaGACCCCAGATCTGCATCCC +
Preference number: 4 (lower is better)
Translates to: WVPVILERCGQRDVIWACDKAFH*TPDLHP
Trigger: GGGATGCAGATCTGGGGTGCAGTGGAACGCTTTGTC...ACAGGCCCAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGCACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
CDS-3UTR GCA 90 bp GCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGGGCCTGTGTTCCGACAAAGCGTTCCACTaGACCCCAGATCTGCATCCC +
Preference number: 4 (lower is better)
Translates to: ASYPRAMWSKGCHLGLCSDKAFH*TPDLHP
Trigger: GGGATGCAGATCTGGGGTGCAGTGGAACGCTTTGTC...GGAACACAGGCCCAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
CDS-3UTR GCA 90 bp TGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGGGCCTGTGGTCTCCAGGCTCCTTaGTCAGCAACCAGAGAGCAA +
Preference number: 4 (lower is better)
Translates to: WVPVILERCGQRDVIWACGLQAP*SATREQ
Trigger: TTGCTCTCTGGTTGCTGAGCAAGGAGCCTGGAGACC...ACAGGCCCAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGCACCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR GCA 90 bp GCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGGGCCTGTGTTCCGGTCTCCAGGCTCCTTaGTCAGCAACCAGAGAGCAA +
Preference number: 4 (lower is better)
Translates to: ASYPRAMWSKGCHLGLCSGLQAP*SATREQ
Trigger: TTGCTCTCTGGTTGCTGAGCAAGGAGCCTGGAGACC...GGAACACAGGCCCAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CCA 90 bp TGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGGGCCTGTGCAGTGAGGCCAACCTaGGTTGTAAGCCTTCCACTG +
Preference number: 4 (lower is better)
Translates to: WVPVILERCGQRDVIWACAVRPT*VVSLPL
Trigger: CAGTGGAAGGCTTACAACCCAGGTTGGCCTCACTGC...ACAGGCCCAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGCACCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CCA 90 bp TCTGAGGAGTCCTTTTCTCTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGCTCAGCCTGCAAGCTaGTCCCAGGACCCAACACTG +
Preference number: 4 (lower is better)
Translates to: SEESFSLGASYPRAMWSKAQPAS*SQDPTL
Trigger: CAGTGTTGGGTCCTGGGACCAGCTTGCAGGCTGAGC...CTTTGACCACATCGCTCTAGGATAACTGGCACCCAGAGAAAAGGACTCCTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CCA 90 bp TTTTCTCTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGTTTGGGCCGGGGGTCTaGCTGAGCTGGATGGCGAGA +
Preference number: 4 (lower is better)
Translates to: FSLGASYPRAMWSKGCHLFGPGV*LSWMAR
Trigger: TCTCGCCATCCAGCTCAGCCAGACCCCCGGCCCAAA...CAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGCACCCAGAGAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CCA 90 bp TGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGGGCCTGTTCTCTGACCCAGGCCTaGAGCTCTCTGTCATCTTGG +
Preference number: 4 (lower is better)
Translates to: WVPVILERCGQRDVIWACSLTQA*SSLSSW
Trigger: CCAAGATGACAGAGAGCTCCAGGCCTGGGTCAGAGA...ACAGGCCCAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGCACCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CCA 90 bp GTGTGTATGGTGGTGGGGGTGAGTTACAGAGTCTGGTTGTCCCAGGAGAGGCACATACCTGAGCTCTCCTaGTTTAGGAAGCCCTTGGAG +
Preference number: 4 (lower is better)
Translates to: VCMVVGVSYRVWLSQERHIPELS*FRKPLE
Trigger: CTCCAAGGGCTTCCTAAACCAGGAGAGCTCAGGTAT...GTGCCTCTCCTGGGACAACCAGACTCTGTAACTCACCCCCACCACCATACACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CCA 90 bp TCTGAGGAGTCCTTTTCTCTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGTTTGGAGGTGGGTGGTaGCAGCTGCATGCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: SEESFSLGASYPRAMWSKFGGGW*QLHAGW
Trigger: CCACCCAGCATGCAGCTGCCACCACCCACCTCCAAA...CTTTGACCACATCGCTCTAGGATAACTGGCACCCAGAGAAAAGGACTCCTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CCA 90 bp TGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGGGCCTGTGGGCCTGTGTTCCCCTaGGATTTAGATGGAGACGCT +
Preference number: 4 (lower is better)
Translates to: WVPVILERCGQRDVIWACGPVFP*DLDGDA
Trigger: AGCGTCTCCATCTAAATCCCAGGGGAACACAGGCCC...ACAGGCCCAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGCACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CCA 90 bp CTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGGGCCTGGTGAGTTACAGAGTCTaGTTGTCCCAGGAGAGGCAC +
Preference number: 4 (lower is better)
Translates to: LGASYPRAMWSKGCHLGLVSYRV*LSQERH
Trigger: GTGCCTCTCCTGGGACAACCAGACTCTGTAACTCAC...CAGGCCCAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGCACCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
3UTR CAA 72 bp ACTAGCAAAACCCTCAAGGTGGGCTCTGCGGGCACTTaGAGGCTTGGAGCCTCCAAAAGACTCAGTGGTTCT +
Preference number: 4 (lower is better)
Translates to: TSKTLKVGSAGT*RLGASKRLSGS
Trigger: AGAACCACTGAGTCTTTTGGAGGCTCCAAGCCTCAAAGTGCCCGCAGAGCCCACCTTGAGGGTTTTGCTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
CDS-3UTR TCA 90 bp TTTTCTCTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGCCTCAGCGCCCGCAGTaGACTCCTTGCCGAGATTGT +
Preference number: 4 (lower is better)
Translates to: FSLGASYPRAMWSKGCHLPQRPQ*TPCRDC
Trigger: ACAATCTCGGCAAGGAGTTCACTGCGGGCGCTGAGG...CAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGCACCCAGAGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR TCA 90 bp TTTCTGAGGAGTCCTTTTCTCTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAACCTCAGCGCCCGCAGTaGACTCCTTGCCGAGATTGT +
Preference number: 4 (lower is better)
Translates to: FLRSPFLWVPVILERCGQPQRPQ*TPCRDC
Trigger: ACAATCTCGGCAAGGAGTTCACTGCGGGCGCTGAGG...TTGACCACATCGCTCTAGGATAACTGGCACCCAGAGAAAAGGACTCCTCAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR TCA 90 bp TTTTCTCTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGCCCAGGACCCAACACTaGGGCCACCATGGCATCAGT +
Preference number: 4 (lower is better)
Translates to: FSLGASYPRAMWSKGCHLPRTQH*GHHGIS
Trigger: ACTGATGCCATGGTGGCCTCAGTGTTGGGTCCTGGG...CAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGCACCCAGAGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR TCA 90 bp TCTGAGGAGTCCTTTTCTCTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGCCAGAGAGGATGCCGTaGTCCACCAAGAACAGGGAG +
Preference number: 4 (lower is better)
Translates to: SEESFSLGASYPRAMWSKPERMP*STKNRE
Trigger: CTCCCTGTTCTTGGTGGATCACGGCATCCTCTCTGG...CTTTGACCACATCGCTCTAGGATAACTGGCACCCAGAGAAAAGGACTCCTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR TCA 90 bp TTTTCTCTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGCTCAGGCAGCAGATGTaGGTGCAGCAGGTGCGTGAG +
Preference number: 4 (lower is better)
Translates to: FSLGASYPRAMWSKGCHLLRQQM*VQQVRE
Trigger: CTCACGCACCTGCTGCACTCACATCTGCTGCCTGAG...CAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGCACCCAGAGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR GCA 90 bp ACTAGCAAAACCCTCAAGGTGGGCTCTGCGGGCACTTTGAGGCTTGGAGCCTCCCTTGATTTTCATCTCTaGAAAAGCAGAGCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: TSKTLKVGSAGTLRLGASLDFHL*KSRASL
Trigger: CAGGCTGGCTCTGCTTTTGCAGAGATGAAAATCAAG...GGAGGCTCCAAGCCTCAAAGTGCCCGCAGAGCCCACCTTGAGGGTTTTGCTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
CDS-3UTR GCA 90 bp TCTGAGGAGTCCTTTTCTCTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGTTCTCTAGCTCAGCCTaGAAGCTGGTCCCAGGACCC +
Preference number: 4 (lower is better)
Translates to: SEESFSLGASYPRAMWSKFSSSA*KLVPGP
Trigger: GGGTCCTGGGACCAGCTTGCAGGCTGAGCTAGAGAA...CTTTGACCACATCGCTCTAGGATAACTGGCACCCAGAGAAAAGGACTCCTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR GCA 90 bp TCTGAGGAGTCCTTTTCTCTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGTGTGAGTGCAGCAGGTaGGTGAGGGCCTCATGGAAG +
Preference number: 4 (lower is better)
Translates to: SEESFSLGASYPRAMWSKCECSR*VRASWK
Trigger: CTTCCATGAGGCCCTCACGCACCTGCTGCACTCACA...CTTTGACCACATCGCTCTAGGATAACTGGCACCCAGAGAAAAGGACTCCTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR GCA 90 bp TTTTCTCTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGGACCTGTCCACCACCTaGCCTGGCACGATAAGCAGC +
Preference number: 4 (lower is better)
Translates to: FSLGASYPRAMWSKGCHLDLSTT*PGTISS
Trigger: GCTGCTTATCGTGCCAGGGCAGGTGGTGGACAGGTC...CAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGCACCCAGAGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380183.9
ENST00000572022.5
CDS-3UTR GCA 90 bp TGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGGGCCTGTCAGAGAAGCCTTCAATaGCGATGCCTGTGGACCTGT +
Preference number: 4 (lower is better)
Translates to: WVPVILERCGQRDVIWACQRSLQ*RCLWTC
Trigger: ACAGGTCCACAGGCATCGGCATTGAAGGCTTCTCTG...ACAGGCCCAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGCACCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380183.9
ENST00000572022.5
CDS-3UTR GCA 90 bp TCTGAGGAGTCCTTTTCTCTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGCACTGACAGCCGCATaGTTGGCGGAGCAGGTGAAT +
Preference number: 4 (lower is better)
Translates to: SEESFSLGASYPRAMWSKALTAA*LAEQVN
Trigger: ATTCACCTGCTCCGCCAAGCATGCGGCTGTCAGTGC...CTTTGACCACATCGCTCTAGGATAACTGGCACCCAGAGAAAAGGACTCCTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR GCA 90 bp CTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGGGCCTGCTCCATCTCCCAAAGTaGTGGGATTATGGGCATGAG +
Preference number: 4 (lower is better)
Translates to: LGASYPRAMWSKGCHLGLLHLPK*WDYGHE
Trigger: CTCATGCCCATAATCCCAGCACTTTGGGAGATGGAG...CAGGCCCAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGCACCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
CDS-3UTR CCA 90 bp TTTTCTCTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGCCGCAGCCTGGGCTCTaGTATAGCAGGGTCATTGGG +
Preference number: 4 (lower is better)
Translates to: FSLGASYPRAMWSKGCHLPQPGL*YSRVIG
Trigger: CCCAATGACCCTGCTATACCAGAGCCCAGGCTGCGG...CAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGCACCCAGAGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CCA 90 bp CTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGGGCCTGACGGTAGTAGTAGCCTaGGATGTCTTCAACTCCTCG +
Preference number: 4 (lower is better)
Translates to: LGASYPRAMWSKGCHLGLTVVVA*DVFNSS
Trigger: CGAGGAGTTGAAGACATCCCAGGCTACTACTACCGT...CAGGCCCAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGCACCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CCA 90 bp TCTGAGGAGTCCTTTTCTCTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGTGCTGGGTGGCAGGTTaGGCATCCAAGCACAGGAGT +
Preference number: 4 (lower is better)
Translates to: SEESFSLGASYPRAMWSKCWVAG*ASKHRS
Trigger: ACTCCTGTGCTTGGATGCCCAACCTGCCACCCAGCA...CTTTGACCACATCGCTCTAGGATAACTGGCACCCAGAGAAAAGGACTCCTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CCA 90 bp TGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGGGCCTGTGTGAGTTACAGAGTCTaGTTGTCCCAGGAGAGGCAC +
Preference number: 4 (lower is better)
Translates to: WVPVILERCGQRDVIWACVSYRV*LSQERH
Trigger: GTGCCTCTCCTGGGACAACCAGACTCTGTAACTCAC...ACAGGCCCAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGCACCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CCA 90 bp TGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGGGCCTGTGGGCACTTTGAGGCTTaGAGCCTCCAAAAGACTCAG +
Preference number: 4 (lower is better)
Translates to: WVPVILERCGQRDVIWACGHFEA*SLQKTQ
Trigger: CTGAGTCTTTTGGAGGCTCCAAGCCTCAAAGTGCCC...ACAGGCCCAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGCACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CCA 90 bp TCTGAGGAGTCCTTTTCTCTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGATGCTAGTGGGCCCTaGGGCGGGATTATGTGCTTC +
Preference number: 4 (lower is better)
Translates to: SEESFSLGASYPRAMWSKDASGP*GGIMCF
Trigger: GAAGCACATAATCCCGCCCCAGGGCCCACTAGCATC...CTTTGACCACATCGCTCTAGGATAACTGGCACCCAGAGAAAAGGACTCCTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
CDS-3UTR CCA 90 bp CTCTTTGGCAGCCACTTCTTGGTGGCTGTCCTTGAGTTGGGTGACCATAAGGTCTTGGCAGCCACTTCTTaGTGGCTGTCCTTGAGTTGG +
Preference number: 4 (lower is better)
Translates to: LFGSHFLVAVLELGDHKVLAATS*WLSLSW
Trigger: CCAACTCAAGGACAGCCACCAAGAAGTGGCTGCCAA...GACCTTATGGTCACCCAACTCAAGGACAGCCACCAAGAAGTGGCTGCCAAAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
3UTR CAA 72 bp CCAGTCTCTTTGGCAGCCACTTCTTGGTGGCTGTCCTaGAGTTGGGTGACCATAAGGTCCAATCAGTGGATG +
Preference number: 4 (lower is better)
Translates to: PVSLAATSWWLS*SWVTIRSNQWM
Trigger: CATCCACTGATTGGACCTTATGGTCACCCAACTCAAGGACAGCCACCAAGAAGTGGCTGCCAAAGAGACTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
CDS-3UTR TCA 90 bp TTTCTGAGGAGTCCTTTTCTCTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAGGGTCCCCACGATGCTaGCAGACACTTTGTCCCATG +
Preference number: 4 (lower is better)
Translates to: FLRSPFLWVPVILERCGQGSPRC*QTLCPM
Trigger: CATGGGACAAAGTGTCTGTCAGCATCGTGGGGACCC...TTGACCACATCGCTCTAGGATAACTGGCACCCAGAGAAAAGGACTCCTCAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR TCA 90 bp GTCCTTGAGTTGGGTGACCATAAGGTCCAATCAGTGGATGCTAGTGGGCCCTGGGGGTCCTCCGGAAGTTaGAGATCCTTTTCATCTCAT +
Preference number: 4 (lower is better)
Translates to: VLELGDHKVQSVDASGPWGSSGS*RSFSSH
Trigger: ATGAGATGAAAAGGATCTTCAACTTCCGGAGGACCC...CCAGGGCCCACTAGCATCCACTGATTGGACCTTATGGTCACCCAACTCAAGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
CDS-3UTR TCA 90 bp CTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGGGCCTGGGGTCCTCCGGAAGTTaGAGATCCTTTTCATCTCAT +
Preference number: 4 (lower is better)
Translates to: LGASYPRAMWSKGCHLGLGSSGS*RSFSSH
Trigger: ATGAGATGAAAAGGATCTTCAACTTCCGGAGGACCC...CAGGCCCAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGCACCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR TCA 90 bp TTTCTGAGGAGTCCTTTTCTCTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAGCTCTGCGGGCACTTTaGGGCTTGGAGCCTCCAAAA +
Preference number: 4 (lower is better)
Translates to: FLRSPFLWVPVILERCGQALRAL*GLEPPK
Trigger: TTTTGGAGGCTCCAAGCCTCAAAGTGCCCGCAGAGC...TTGACCACATCGCTCTAGGATAACTGGCACCCAGAGAAAAGGACTCCTCAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR TCA 90 bp GTCCTTGAGTTGGGTGACCATAAGGTCCAATCAGTGGATGCTAGTGGGCCCTGGACTTCTGACCTCAAATaGTTTTCCCGCCTCCATCTC +
Preference number: 4 (lower is better)
Translates to: VLELGDHKVQSVDASGPWTSDLK*FSRLHL
Trigger: GAGATGGAGGCGGGAAAATCATTTGAGGTCAGAAGT...CCAGGGCCCACTAGCATCCACTGATTGGACCTTATGGTCACCCAACTCAAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
CDS-3UTR GCA 90 bp TCTGAGGAGTCCTTTTCTCTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGAAATGCGTGCTCAGCTaGTGGGGTCCTCCGGAAGTT +
Preference number: 4 (lower is better)
Translates to: SEESFSLGASYPRAMWSKKCVLS*WGPPEV
Trigger: AACTTCCGGAGGACCCCAGCAGCTGAGCACGCATTT...CTTTGACCACATCGCTCTAGGATAACTGGCACCCAGAGAAAAGGACTCCTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR GCA 90 bp TCTGAGGAGTCCTTTTCTCTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGAAGAAGGCGTCCTCCTaGCAGTGCTCAAATGCGTGC +
Preference number: 4 (lower is better)
Translates to: SEESFSLGASYPRAMWSKKKASS*QCSNAC
Trigger: GCACGCATTTGAGCACTGGCAGGAGGACGCCTTCTT...CTTTGACCACATCGCTCTAGGATAACTGGCACCCAGAGAAAAGGACTCCTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR GCA 90 bp TTTCTGAGGAGTCCTTTTCTCTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAATGTGAGTGCAGCAGGTaGGTGAGGGCCTCATGGAAG +
Preference number: 4 (lower is better)
Translates to: FLRSPFLWVPVILERCGQCECSR*VRASWK
Trigger: CTTCCATGAGGCCCTCACGCACCTGCTGCACTCACA...TTGACCACATCGCTCTAGGATAACTGGCACCCAGAGAAAAGGACTCCTCAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR GCA 90 bp TCTGAGGAGTCCTTTTCTCTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGCGAGTGTGTTGATGTaGAGGGTGTATCGGGTGTGC +
Preference number: 4 (lower is better)
Translates to: SEESFSLGASYPRAMWSKASVLM*RVYRVC
Trigger: GCACACCCGATACACCCTGCACATCAACACACTCGC...CTTTGACCACATCGCTCTAGGATAACTGGCACCCAGAGAAAAGGACTCCTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380183.9
ENST00000572022.5
CDS-3UTR GCA 90 bp TTTTCTCTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGGCACTGACAGCCGCATaGTTGGCGGAGCAGGTGAAT +
Preference number: 4 (lower is better)
Translates to: FSLGASYPRAMWSKGCHLALTAA*LAEQVN
Trigger: ATTCACCTGCTCCGCCAAGCATGCGGCTGTCAGTGC...CAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGCACCCAGAGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CCA 90 bp TTTTCTCTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGTGCGTGCTCAGCTGCTaGGGTCCTCCGGAAGTTGAA +
Preference number: 4 (lower is better)
Translates to: FSLGASYPRAMWSKGCHLCVLSC*GPPEVE
Trigger: TTCAACTTCCGGAGGACCCCAGCAGCTGAGCACGCA...CAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGCACCCAGAGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CCA 90 bp GTCCTTGAGTTGGGTGACCATAAGGTCCAATCAGTGGATGCTAGTGGGCCCTGGTTAATGACATTGGTCTaGATGCCAGAGAGGATGCCG +
Preference number: 4 (lower is better)
Translates to: VLELGDHKVQSVDASGPWLMTLV*MPERMP
Trigger: CGGCATCCTCTCTGGCATCCAGACCAATGTCATTAA...CCAGGGCCCACTAGCATCCACTGATTGGACCTTATGGTCACCCAACTCAAGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
CDS-3UTR CCA 90 bp GCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGGGCCTGTGTTCCACGGTAGTAGTAGCCTaGGATGTCTTCAACTCCTCG +
Preference number: 4 (lower is better)
Translates to: ASYPRAMWSKGCHLGLCSTVVVA*DVFNSS
Trigger: CGAGGAGTTGAAGACATCCCAGGCTACTACTACCGT...GGAACACAGGCCCAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CCA 90 bp TGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGGGCCTGTACGGTAGTAGTAGCCTaGGATGTCTTCAACTCCTCG +
Preference number: 4 (lower is better)
Translates to: WVPVILERCGQRDVIWACTVVVA*DVFNSS
Trigger: CGAGGAGTTGAAGACATCCCAGGCTACTACTACCGT...ACAGGCCCAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGCACCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CCA 90 bp CCTCAAGGTGGGCTCTGCGGGCACTTTGAGGCTTGGAGCCTCCAAAAGACTCAGGACAGACTCATCACTTaGGTAGTAGATACCGATGAT +
Preference number: 4 (lower is better)
Translates to: PQGGLCGHFEAWSLQKTQDRLIT*VVDTDD
Trigger: ATCATCGGTATCTACTACCCAAGTGATGAGTCTGTC...CTGAGTCTTTTGGAGGCTCCAAGCCTCAAAGTGCCCGCAGAGCCCACCTTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
CDS-3UTR CCA 90 bp CTCTTTGGCAGCCACTTCTTGGTGGCTGTCCTTGAGTTGGGTGACCATAAGGTCATACCTGAGCTCTCCTaGTTTAGGAAGCCCTTGGAG +
Preference number: 4 (lower is better)
Translates to: LFGSHFLVAVLELGDHKVIPELS*FRKPLE
Trigger: CTCCAAGGGCTTCCTAAACCAGGAGAGCTCAGGTAT...GACCTTATGGTCACCCAACTCAAGGACAGCCACCAAGAAGTGGCTGCCAAAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
CDS-3UTR CCA 90 bp TCTGAGGAGTCCTTTTCTCTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGTGTGGCATTGACAGGTaGGAGGGTGGCTATGAAGCC +
Preference number: 4 (lower is better)
Translates to: SEESFSLGASYPRAMWSKCGIDR*EGGYEA
Trigger: GGCTTCATAGCCACCCTCCCACCTGTCAATGCCACA...CTTTGACCACATCGCTCTAGGATAACTGGCACCCAGAGAAAAGGACTCCTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CCA 90 bp TCTGAGGAGTCCTTTTCTCTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGGGCCTGTGTTCCCCTaGGATTTAGATGGAGACGCT +
Preference number: 4 (lower is better)
Translates to: SEESFSLGASYPRAMWSKGPVFP*DLDGDA
Trigger: AGCGTCTCCATCTAAATCCCAGGGGAACACAGGCCC...CTTTGACCACATCGCTCTAGGATAACTGGCACCCAGAGAAAAGGACTCCTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CCA 90 bp TCTGAGGAGTCCTTTTCTCTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGCAGCCACTTCTTGGTaGCTGTCCTTGAGTTGGGTG +
Preference number: 4 (lower is better)
Translates to: SEESFSLGASYPRAMWSKAATSW*LSLSWV
Trigger: CACCCAACTCAAGGACAGCCACCAAGAAGTGGCTGC...CTTTGACCACATCGCTCTAGGATAACTGGCACCCAGAGAAAAGGACTCCTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
CDS-3UTR TCA 90 bp TTTCTGAGGAGTCCTTTTCTCTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAACCACCATGGCATCAGTaGCGGGGAAGTTCTTTGGGA +
Preference number: 4 (lower is better)
Translates to: FLRSPFLWVPVILERCGQPPWHQ*RGSSLG
Trigger: TCCCAAAGAACTTCCCCGTCACTGATGCCATGGTGG...TTGACCACATCGCTCTAGGATAACTGGCACCCAGAGAAAAGGACTCCTCAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR TCA 90 bp TCTGAGGAGTCCTTTTCTCTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGTATGGTGGTGGGGGTaGGTTACAGAGTCTGGTTGT +
Preference number: 4 (lower is better)
Translates to: SEESFSLGASYPRAMWSKVWWWG*VTESGC
Trigger: ACAACCAGACTCTGTAACTCACCCCCACCACCATAC...CTTTGACCACATCGCTCTAGGATAACTGGCACCCAGAGAAAAGGACTCCTCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR TCA 90 bp CTCTTTGGCAGCCACTTCTTGGTGGCTGTCCTTGAGTTGGGTGACCATAAGGTCACTTCTGACCTCAAATaGTTTTCCCGCCTCCATCTC +
Preference number: 4 (lower is better)
Translates to: LFGSHFLVAVLELGDHKVTSDLK*FSRLHL
Trigger: GAGATGGAGGCGGGAAAATCATTTGAGGTCAGAAGT...GACCTTATGGTCACCCAACTCAAGGACAGCCACCAAGAAGTGGCTGCCAAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
CDS-3UTR GCA 90 bp TTTCTGAGGAGTCCTTTTCTCTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAACACTTTGTCCCATGTaGCAGCCCCGAAGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: FLRSPFLWVPVILERCGQTLCPM*QPRRLL
Trigger: GAGAAGCCTTCGGGGCTGGCACATGGGACAAAGTGT...TTGACCACATCGCTCTAGGATAACTGGCACCCAGAGAAAAGGACTCCTCAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR GCA 90 bp TTTCTGAGGAGTCCTTTTCTCTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAAATGCGTGCTCAGCTaGTGGGGTCCTCCGGAAGTT +
Preference number: 4 (lower is better)
Translates to: FLRSPFLWVPVILERCGQKCVLS*WGPPEV
Trigger: AACTTCCGGAGGACCCCAGCAGCTGAGCACGCATTT...TTGACCACATCGCTCTAGGATAACTGGCACCCAGAGAAAAGGACTCCTCAGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR GCA 90 bp TTTTCTCTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGCTCATCACGTTCCACTaGACCCCAGATCTGCATCCC +
Preference number: 4 (lower is better)
Translates to: FSLGASYPRAMWSKGCHLLITFH*TPDLHP
Trigger: GGGATGCAGATCTGGGGTGCAGTGGAACGTGATGAG...CAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGCACCCAGAGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572022.5
CDS-3UTR CCA 90 bp TTTCTGAGGAGTCCTTTTCTCTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAACCCCTGGGACACGCCTaGTTATTGCCCCTGGTTATT +
Preference number: 4 (lower is better)
Translates to: FLRSPFLWVPVILERCGQPLGHA*LLPLVI
Trigger: AATAACCAGGGGCAATAACCAGGCGTGTCCCAGGGG...TTGACCACATCGCTCTAGGATAACTGGCACCCAGAGAAAAGGACTCCTCAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CCA 90 bp GTGTGTATGGTGGTGGGGGTGAGTTACAGAGTCTGGTTGTCCCAGGAGAGGCACCCTGTAGATAAAAGTTaGCATTCTTGGCTGTGGAGT +
Preference number: 4 (lower is better)
Translates to: VCMVVGVSYRVWLSQERHPVDKS*HSWLWS
Trigger: ACTCCACAGCCAAGAATGCCAACTTTTATCTACAGG...GTGCCTCTCCTGGGACAACCAGACTCTGTAACTCACCCCCACCACCATACACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CCA 90 bp GCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGGGCCTGTGTTCCTTAATGACATTGGTCTaGATGCCAGAGAGGATGCCG +
Preference number: 4 (lower is better)
Translates to: ASYPRAMWSKGCHLGLCSLMTLV*MPERMP
Trigger: CGGCATCCTCTCTGGCATCCAGACCAATGTCATTAA...GGAACACAGGCCCAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CCA 90 bp TTTTCTCTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGTGCGTGAGGGCCTCATaGAAGGAGAACTCGGCATTG +
Preference number: 4 (lower is better)
Translates to: FSLGASYPRAMWSKGCHLCVRAS*KENSAL
Trigger: CAATGCCGAGTTCTCCTTCCATGAGGCCCTCACGCA...CAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGCACCCAGAGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CCA 90 bp TTTCTGAGGAGTCCTTTTCTCTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAATCTCTGACCCAGGCCTaGAGCTCTCTGTCATCTTGG +
Preference number: 4 (lower is better)
Translates to: FLRSPFLWVPVILERCGQSLTQA*SSLSSW
Trigger: CCAAGATGACAGAGAGCTCCAGGCCTGGGTCAGAGA...TTGACCACATCGCTCTAGGATAACTGGCACCCAGAGAAAAGGACTCCTCAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CCA 90 bp TTTTCTCTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGTGTGGCATTGACAGGTaGGAGGGTGGCTATGAAGCC +
Preference number: 4 (lower is better)
Translates to: FSLGASYPRAMWSKGCHLCGIDR*EGGYEA
Trigger: GGCTTCATAGCCACCCTCCCACCTGTCAATGCCACA...CAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGCACCCAGAGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CCA 90 bp TTTTCTCTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGCAAAGGGATGTCATCTaGGCCTGTGTTCCCCTGGGA +
Preference number: 4 (lower is better)
Translates to: FSLGASYPRAMWSKGCHLQRDVI*ACVPLG
Trigger: TCCCAGGGGAACACAGGCCCAGATGACATCCCTTTG...CAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGCACCCAGAGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CCA 90 bp TTTCTGAGGAGTCCTTTTCTCTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAACAAAGGGATGTCATCTaGGCCTGTGTTCCCCTGGGA +
Preference number: 4 (lower is better)
Translates to: FLRSPFLWVPVILERCGQQRDVI*ACVPLG
Trigger: TCCCAGGGGAACACAGGCCCAGATGACATCCCTTTG...TTGACCACATCGCTCTAGGATAACTGGCACCCAGAGAAAAGGACTCCTCAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CCA 90 bp CTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGGGCCTGTATCCTAGAGCGATGTaGTCAAAGGGATGTCATCTG +
Preference number: 4 (lower is better)
Translates to: LGASYPRAMWSKGCHLGLYPRAM*SKGCHL
Trigger: CAGATGACATCCCTTTGACCACATCGCTCTAGGATA...CAGGCCCAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGCACCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CCA 90 bp TGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGGGCCTGTAGGAGTCCTTTTCTCTaGGTGCCAGTTATCCTAGAG +
Preference number: 4 (lower is better)
Translates to: WVPVILERCGQRDVIWACRSPFL*VPVILE
Trigger: CTCTAGGATAACTGGCACCCAGAGAAAAGGACTCCT...ACAGGCCCAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGCACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CCA 90 bp TCTGAGGAGTCCTTTTCTCTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGGGCACTTTGAGGCTTaGAGCCTCCAAAAGACTCAG +
Preference number: 4 (lower is better)
Translates to: SEESFSLGASYPRAMWSKGHFEA*SLQKTQ
Trigger: CTGAGTCTTTTGGAGGCTCCAAGCCTCAAAGTGCCC...CTTTGACCACATCGCTCTAGGATAACTGGCACCCAGAGAAAAGGACTCCTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CCA 90 bp GCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGGGCCTGTGTTCCTGGCTGTCCTTGAGTTaGGTGACCATAAGGTCCAAT +
Preference number: 4 (lower is better)
Translates to: ASYPRAMWSKGCHLGLCSWLSLS*VTIRSN
Trigger: ATTGGACCTTATGGTCACCCAACTCAAGGACAGCCA...GGAACACAGGCCCAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
CDS-3UTR CCA 90 bp GCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGGGCCTGTGTTCCAGCTCTCTGTCATCTTaGACAGACTCATCACGTTCC +
Preference number: 4 (lower is better)
Translates to: ASYPRAMWSKGCHLGLCSSSLSS*TDSSRS
Trigger: GGAACGTGATGAGTCTGTCCAAGATGACAGAGAGCT...GGAACACAGGCCCAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572022.5
3UTR CAA 72 bp CTCTTTGGCAGCCACTTCTTGGTGGCTGTCCTTGAGTaGGGTGACCATAAGGTCCAATCAGTGGATGCTAGT +
Preference number: 4 (lower is better)
Translates to: LFGSHFLVAVLE*GDHKVQSVDAS
Trigger: ACTAGCATCCACTGATTGGACCTTATGGTCACCCAACTCAAGGACAGCCACCAAGAAGTGGCTGCCAAAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
CDS-3UTR TCA 90 bp TTTCTGAGGAGTCCTTTTCTCTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAGTATGGTGGTGGGGGTaGGTTACAGAGTCTGGTTGT +
Preference number: 4 (lower is better)
Translates to: FLRSPFLWVPVILERCGQVWWWG*VTESGC
Trigger: ACAACCAGACTCTGTAACTCACCCCCACCACCATAC...TTGACCACATCGCTCTAGGATAACTGGCACCCAGAGAAAAGGACTCCTCAGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR GCA 90 bp TGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGGGCCTGTCTTGATTTTCATCTCTaGAAAAGCAGAGCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: WVPVILERCGQRDVIWACLDFHL*KSRASL
Trigger: CAGGCTGGCTCTGCTTTTGCAGAGATGAAAATCAAG...ACAGGCCCAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGCACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CCA 90 bp GTCCTTGAGTTGGGTGACCATAAGGTCCAATCAGTGGATGCTAGTGGGCCCTGGCCTGTAGATAAAAGTTaGCATTCTTGGCTGTGGAGT +
Preference number: 4 (lower is better)
Translates to: VLELGDHKVQSVDASGPWPVDKS*HSWLWS
Trigger: ACTCCACAGCCAAGAATGCCAACTTTTATCTACAGG...CCAGGGCCCACTAGCATCCACTGATTGGACCTTATGGTCACCCAACTCAAGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
CDS-3UTR CCA 90 bp TCTGAGGAGTCCTTTTCTCTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGATACCTGAGCTCTCCTaGTTTAGGAAGCCCTTGGAG +
Preference number: 4 (lower is better)
Translates to: SEESFSLGASYPRAMWSKIPELS*FRKPLE
Trigger: CTCCAAGGGCTTCCTAAACCAGGAGAGCTCAGGTAT...CTTTGACCACATCGCTCTAGGATAACTGGCACCCAGAGAAAAGGACTCCTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CCA 90 bp TGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGGGCCTGTTATCCTAGAGCGATGTaGTCAAAGGGATGTCATCTG +
Preference number: 4 (lower is better)
Translates to: WVPVILERCGQRDVIWACYPRAM*SKGCHL
Trigger: CAGATGACATCCCTTTGACCACATCGCTCTAGGATA...ACAGGCCCAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGCACCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CCA 90 bp TTTTCTCTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGTTGGCAGCCACTTCTTaGTGGCTGTCCTTGAGTTGG +
Preference number: 4 (lower is better)
Translates to: FSLGASYPRAMWSKGCHLLAATS*WLSLSW
Trigger: CCAACTCAAGGACAGCCACCAAGAAGTGGCTGCCAA...CAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGCACCCAGAGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
CDS-3UTR TCA 90 bp TGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGGGCCTGTGGTAGTAGATACCGATaGTTTCAGAGACAAAGCGTT +
Preference number: 4 (lower is better)
Translates to: WVPVILERCGQRDVIWACGSRYR*FQRQSV
Trigger: AACGCTTTGTCTCTGAAATCATCGGTATCTACTACC...ACAGGCCCAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGCACCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
CDS-3UTR TCA 90 bp TCTGAGGAGTCCTTTTCTCTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGCTGGCCTTGAACTTCTaGCCTCAAATGATTTTCCCG +
Preference number: 4 (lower is better)
Translates to: SEESFSLGASYPRAMWSKLALNF*PQMIFP
Trigger: CGGGAAAATCATTTGAGGTCAGAAGTTCAAGGCCAG...CTTTGACCACATCGCTCTAGGATAACTGGCACCCAGAGAAAAGGACTCCTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
CDS-3UTR CCA 90 bp TTTTCTCTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGCCTGGTTATTGCCCCTaGTTATTGCCACTGACTCCA +
Preference number: 4 (lower is better)
Translates to: FSLGASYPRAMWSKGCHLPGYCP*LLPLTP
Trigger: TGGAGTCAGTGGCAATAACCAGGGGCAATAACCAGG...CAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGCACCCAGAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000572022.5
CDS-3UTR CCA 90 bp TTTTCTCTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGTTAATGACATTGGTCTaGATGCCAGAGAGGATGCCG +
Preference number: 4 (lower is better)
Translates to: FSLGASYPRAMWSKGCHLLMTLV*MPERMP
Trigger: CGGCATCCTCTCTGGCATCCAGACCAATGTCATTAA...CAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGCACCCAGAGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CCA 90 bp TTTCTGAGGAGTCCTTTTCTCTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAATGGCTGTCCTTGAGTTaGGTGACCATAAGGTCCAAT +
Preference number: 4 (lower is better)
Translates to: FLRSPFLWVPVILERCGQWLSLS*VTIRSN
Trigger: ATTGGACCTTATGGTCACCCAACTCAAGGACAGCCA...TTGACCACATCGCTCTAGGATAACTGGCACCCAGAGAAAAGGACTCCTCAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
CDS-3UTR GCA 90 bp TTTCTGAGGAGTCCTTTTCTCTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAACTTGATTTTCATCTCTaGAAAAGCAGAGCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: FLRSPFLWVPVILERCGQLDFHL*KSRASL
Trigger: CAGGCTGGCTCTGCTTTTGCAGAGATGAAAATCAAG...TTGACCACATCGCTCTAGGATAACTGGCACCCAGAGAAAAGGACTCCTCAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CCA 90 bp TCTGAGGAGTCCTTTTCTCTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGCCTGTAGATAAAAGTTaGCATTCTTGGCTGTGGAGT +
Preference number: 4 (lower is better)
Translates to: SEESFSLGASYPRAMWSKPVDKS*HSWLWS
Trigger: ACTCCACAGCCAAGAATGCCAACTTTTATCTACAGG...CTTTGACCACATCGCTCTAGGATAACTGGCACCCAGAGAAAAGGACTCCTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CCA 90 bp TCTGAGGAGTCCTTTTCTCTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGACAGACTCATCACTTaGGTAGTAGATACCGATGAT +
Preference number: 4 (lower is better)
Translates to: SEESFSLGASYPRAMWSKDRLIT*VVDTDD
Trigger: ATCATCGGTATCTACTACCCAAGTGATGAGTCTGTC...CTTTGACCACATCGCTCTAGGATAACTGGCACCCAGAGAAAAGGACTCCTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
CDS-3UTR TCA 90 bp TTTTCTCTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGGGTAGTAGATACCGATaGTTTCAGAGACAAAGCGTT +
Preference number: 4 (lower is better)
Translates to: FSLGASYPRAMWSKGCHLGSRYR*FQRQSV
Trigger: AACGCTTTGTCTCTGAAATCATCGGTATCTACTACC...CAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGCACCCAGAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
CDS CCA 90 bp GGAGGCCCTGGGAGACCCTTCCCTGTCAGCCAGCCTTATGCCTCTTaGGATCCTGAACCAGCCTCCGGGCCCAAGGTAGTCACTACCCCT +
Preference number: 5 (lower is better)
Translates to: GGPGRPFPVSQPYAS*DPEPASGPKVVTTP
Trigger: AGGGGTAGTGACTACCTTGGGCCCGGAGGCTGGTTCAGGATCCCAAGAGGCATAAGGCTGGCTGACAGGGAAGGGTCTCCCAGGGCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571240.1
CDS GCA 90 bp CCTCGCATGTTGCCAGGCCTTTGGAGGTGGGTGGTGGCAGCTGCATaGTGGGTGGCAGGTTGGGCATCCAAGCACAGGAGTCAAACTGCC +
Preference number: 5 (lower is better)
Translates to: PRMLPGLWRWVVAAA*WVAGWASKHRSQTA
Trigger: GGCAGTTTGACTCCTGTGCTTGGATGCCCAACCTGCCACCCAGCATGCAGCTGCCACCACCCACCTCCAAAGGCCTGGCAACATGCGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000571240.1
ENST00000572022.5
ENST00000573359.1
CDS GCA 90 bp TGTGGCATTGACAGGTGGGAGGGTGGCTATGAAGCCCTCGCATGTTaGCAGGCCTTTGGAGGTGGGTGGTGGCAGCTGCATGCTGGGTGG +
Preference number: 5 (lower is better)
Translates to: CGIDRWEGGYEALAC*QAFGGGWWQLHAGW
Trigger: CCACCCAGCATGCAGCTGCCACCACCCACCTCCAAAGGCCTGGCAACATGCGAGGGCTTCATAGCCACCCTCCCACCTGTCAATGCCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000571240.1
ENST00000572022.5
ENST00000573359.1
CDS CCA 90 bp CGCATGTTGCCAGGCCTTTGGAGGTGGGTGGTGGCAGCTGCATGCTaGGTGGCAGGTTGGGCATCCAAGCACAGGAGTCAAACTGCCCTG +
Preference number: 5 (lower is better)
Translates to: RMLPGLWRWVVAAAC*VAGWASKHRSQTAL
Trigger: CAGGGCAGTTTGACTCCTGTGCTTGGATGCCCAACCTGCCACCCAGCATGCAGCTGCCACCACCCACCTCCAAAGGCCTGGCAACATGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000571240.1
ENST00000572022.5
ENST00000573359.1
CDS-3UTR CAA 90 bp GAGTTGGGTGACCATAAGGTCCAATCAGTGGATGCTAGTGGGCCCTGGGGCGGGTCTGCCCAGGACACCTaGGCTGTACCCTCCTGCAGC +
Preference number: 5 (lower is better)
Translates to: ELGDHKVQSVDASGPWGGSAQDT*AVPSCS
Trigger: GCTGCAGGAGGGTACAGCCAAGGTGTCCTGGGCAGA...CCCGCCCCAGGGCCCACTAGCATCCACTGATTGGACCTTATGGTCACCCAACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
CDS GCA 90 bp GGGTTGAGACCATTCAGGAACTGGGAGGCGAAGAAGGCGTCCTCCTaGCAGTGCTCAAATGCGTGCTCAGCTGCTGGGGTCCTCCGGAAG +
Preference number: 5 (lower is better)
Translates to: GLRPFRNWEAKKASS*QCSNACSAAGVLRK
Trigger: CTTCCGGAGGACCCCAGCAGCTGAGCACGCATTTGAGCACTGGCAGGAGGACGCCTTCTTCGCCTCCCAGTTCCTGAATGGTCTCAACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000571240.1
ENST00000572022.5
ENST00000573359.1
CDS GCA 90 bp GTAGCCAGGGTGAAGACCTCAGGCAGCAGATGTGAGTGCAGCAGGTaGGTGAGGGCCTCATGGAAGGAGAACTCGGCATTGCGCACCCAG +
Preference number: 5 (lower is better)
Translates to: VARVKTSGSRCECSR*VRASWKENSALRTQ
Trigger: CTGGGTGCGCAATGCCGAGTTCTCCTTCCATGAGGCCCTCACGCACCTGCTGCACTCACATCTGCTGCCTGAGGTCTTCACCCTGGCTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000571240.1
ENST00000572022.5
ENST00000573359.1
CDS GCA 90 bp AAGCCCTCGCATGTTGCCAGGCCTTTGGAGGTGGGTGGTGGCAGCTaGATGCTGGGTGGCAGGTTGGGCATCCAAGCACAGGAGTCAAAC +
Preference number: 5 (lower is better)
Translates to: KPSHVARPLEVGGGS*MLGGRLGIQAQESN
Trigger: GTTTGACTCCTGTGCTTGGATGCCCAACCTGCCACCCAGCATGCAGCTGCCACCACCCACCTCCAAAGGCCTGGCAACATGCGAGGGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000571240.1
ENST00000572022.5
ENST00000573359.1
CDS-3UTR CAA 90 bp ACTAGCAAAACCCTCAAGGTGGGCTCTGCGGGCACTTTGAGGCTTGGAGCCTCCCCCGCAGTGAACTCCTaGCCGAGATTGTCCAGGGGC +
Preference number: 5 (lower is better)
Translates to: TSKTLKVGSAGTLRLGASPAVNS*PRLSRG
Trigger: GCCCCTGGACAATCTCGGCAAGGAGTTCACTGCGGG...GGAGGCTCCAAGCCTCAAAGTGCCCGCAGAGCCCACCTTGAGGGTTTTGCTAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
CDS-3UTR CAA 90 bp GAGTTGGGTGACCATAAGGTCCAATCAGTGGATGCTAGTGGGCCCTGGGGCGGGTGCGGGATCAGCAGCTaGAAGAGAGGGTGGCAGTGG +
Preference number: 5 (lower is better)
Translates to: ELGDHKVQSVDASGPWGGCGISS*KRGWQW
Trigger: CCACTGCCACCCTCTCTTCAAGCTGCTGATCCCGCA...CCCGCCCCAGGGCCCACTAGCATCCACTGATTGGACCTTATGGTCACCCAACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380183.9
CDS-3UTR CAA 90 bp GAGTTGGGTGACCATAAGGTCCAATCAGTGGATGCTAGTGGGCCCTGGGGCGGGGGCTCTGCGGGCACTTaGAGGCTTGGAGCCTCCAAA +
Preference number: 5 (lower is better)
Translates to: ELGDHKVQSVDASGPWGGGSAGT*RLGASK
Trigger: TTTGGAGGCTCCAAGCCTCAAAGTGCCCGCAGAGCC...CCCGCCCCAGGGCCCACTAGCATCCACTGATTGGACCTTATGGTCACCCAACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
CDS GCA 90 bp GCCGCATGCTTGGCGGAGCAGGTGAATATCACCATGGTGACATACTaGACCAGGGCTTCCCGGGTCTCCAGTGAGGAGGGTATACCCCAG +
Preference number: 5 (lower is better)
Translates to: AACLAEQVNITMVTY*TRASRVSSEEGIPQ
Trigger: CTGGGGTATACCCTCCTCACTGGAGACCCGGGAAGCCCTGGTGCAGTATGTCACCATGGTGATATTCACCTGCTCCGCCAAGCATGCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573359.1
CDS-3UTR CAA 90 bp GTCCTTGAGTTGGGTGACCATAAGGTCCAATCAGTGGATGCTAGTGGGCCCTGGCTCCTCCAGAGCCCCTaGCGGTCCAGCAACCCCTTG +
Preference number: 5 (lower is better)
Translates to: VLELGDHKVQSVDASGPWLLQSP*RSSNPL
Trigger: CAAGGGGTTGCTGGACCGCAAGGGGCTCTGGAGGAG...CCAGGGCCCACTAGCATCCACTGATTGGACCTTATGGTCACCCAACTCAAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
CDS-3UTR CAA 90 bp ACTAGCAAAACCCTCAAGGTGGGCTCTGCGGGCACTTTGAGGCTTGGAGCCTCCAAGGAGAACTCGGCATaGCGCACCCAGGTCTTGGCC +
Preference number: 5 (lower is better)
Translates to: TSKTLKVGSAGTLRLGASKENSA*RTQVLA
Trigger: GGCCAAGACCTGGGTGCGCAATGCCGAGTTCTCCTT...GGAGGCTCCAAGCCTCAAAGTGCCCGCAGAGCCCACCTTGAGGGTTTTGCTAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
CDS GCA 90 bp GCCGCATGCTTGGCGGAGCAGGTGAATATCACCATGGTGACATACTaGACCAGGGCTTCCCGGGTCTCCAGTGAGGAGGGTATACCTGAG +
Preference number: 5 (lower is better)
Translates to: AACLAEQVNITMVTY*TRASRVSSEEGIPE
Trigger: CTCAGGTATACCCTCCTCACTGGAGACCCGGGAAGCCCTGGTGCAGTATGTCACCATGGTGATATTCACCTGCTCCGCCAAGCATGCGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000571240.1
ENST00000572022.5
CDS-3UTR CAA 90 bp CTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGGGCCTGCCCGCAGTGAACTCCTaGCCGAGATTGTCCAGGGGC +
Preference number: 5 (lower is better)
Translates to: LGASYPRAMWSKGCHLGLPAVNS*PRLSRG
Trigger: GCCCCTGGACAATCTCGGCAAGGAGTTCACTGCGGG...CAGGCCCAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGCACCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CAA 90 bp GTGTGTATGGTGGTGGGGGTGAGTTACAGAGTCTGGTTGTCCCAGGAGAGGCACATGCTGGGTGGCAGGTaGGGCATCCAAGCACAGGAG +
Preference number: 5 (lower is better)
Translates to: VCMVVGVSYRVWLSQERHMLGGR*GIQAQE
Trigger: CTCCTGTGCTTGGATGCCCAACCTGCCACCCAGCAT...GTGCCTCTCCTGGGACAACCAGACTCTGTAACTCACCCCCACCACCATACACAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CAA 90 bp GACCATAAGGTCCAATCAGTGGATGCTAGTGGGCCCTGGGGCGGGATTATGTGCGGCTCTGCGGGCACTTaGAGGCTTGGAGCCTCCAAA +
Preference number: 5 (lower is better)
Translates to: DHKVQSVDASGPWGGIMCGSAGT*RLGASK
Trigger: TTTGGAGGCTCCAAGCCTCAAAGTGCCCGCAGAGCC...GCACATAATCCCGCCCCAGGGCCCACTAGCATCCACTGATTGGACCTTATGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
CDS-3UTR CAA 90 bp TGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGGGCCTGTTCTGCCCAGGACACCTaGGCTGTACCCTCCTGCAGC +
Preference number: 5 (lower is better)
Translates to: WVPVILERCGQRDVIWACSAQDT*AVPSCS
Trigger: GCTGCAGGAGGGTACAGCCAAGGTGTCCTGGGCAGA...ACAGGCCCAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGCACCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CAA 90 bp GTCCTTGAGTTGGGTGACCATAAGGTCCAATCAGTGGATGCTAGTGGGCCCTGGTCCCGGGCGAGTGTGTaGATGTGCAGGGTGTATCGG +
Preference number: 5 (lower is better)
Translates to: VLELGDHKVQSVDASGPWSRASV*MCRVYR
Trigger: CCGATACACCCTGCACATCAACACACTCGCCCGGGA...CCAGGGCCCACTAGCATCCACTGATTGGACCTTATGGTCACCCAACTCAAGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380183.9
CDS-3UTR CAA 90 bp GTGTGTATGGTGGTGGGGGTGAGTTACAGAGTCTGGTTGTCCCAGGAGAGGCACCTGACAGCCGCATGCTaGGCGGAGCAGGTGAATATC +
Preference number: 5 (lower is better)
Translates to: VCMVVGVSYRVWLSQERHLTAAC*AEQVNI
Trigger: GATATTCACCTGCTCCGCCAAGCATGCGGCTGTCAG...GTGCCTCTCCTGGGACAACCAGACTCTGTAACTCACCCCCACCACCATACACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CAA 90 bp CTCTTTGGCAGCCACTTCTTGGTGGCTGTCCTTGAGTTGGGTGACCATAAGGTCCATGTTGCCAGGCCTTaGGAGGTGGGTGGTGGCAGC +
Preference number: 5 (lower is better)
Translates to: LFGSHFLVAVLELGDHKVHVARP*EVGGGS
Trigger: GCTGCCACCACCCACCTCCAAAGGCCTGGCAACATG...GACCTTATGGTCACCCAACTCAAGGACAGCCACCAAGAAGTGGCTGCCAAAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
CDS-3UTR CAA 90 bp CCTCAAGGTGGGCTCTGCGGGCACTTTGAGGCTTGGAGCCTCCAAAAGACTCAGACATCACATGTGGCATaGACAGGTGGGAGGGTGGCT +
Preference number: 5 (lower is better)
Translates to: PQGGLCGHFEAWSLQKTQTSHVA*TGGRVA
Trigger: AGCCACCCTCCCACCTGTCAATGCCACATGTGATGT...CTGAGTCTTTTGGAGGCTCCAAGCCTCAAAGTGCCCGCAGAGCCCACCTTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
CDS-3UTR CAA 90 bp GAGTTGGGTGACCATAAGGTCCAATCAGTGGATGCTAGTGGGCCCTGGGGCGGGTCTTGGTGGCTGTCCTaGAGTTGGGTGACCATAAGG +
Preference number: 5 (lower is better)
Translates to: ELGDHKVQSVDASGPWGGSWWLS*SWVTIR
Trigger: CCTTATGGTCACCCAACTCAAGGACAGCCACCAAGA...CCCGCCCCAGGGCCCACTAGCATCCACTGATTGGACCTTATGGTCACCCAACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
CDS-3UTR CAA 90 bp GTCCTTGAGTTGGGTGACCATAAGGTCCAATCAGTGGATGCTAGTGGGCCCTGGCTGCGCCCAGTCTCTTaGGCAGCCACTTCTTGGTGG +
Preference number: 5 (lower is better)
Translates to: VLELGDHKVQSVDASGPWLRPVS*AATSWW
Trigger: CCACCAAGAAGTGGCTGCCAAAGAGACTGGGCGCAG...CCAGGGCCCACTAGCATCCACTGATTGGACCTTATGGTCACCCAACTCAAGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
CDS-3UTR CAA 90 bp GTGTGTATGGTGGTGGGGGTGAGTTACAGAGTCTGGTTGTCCCAGGAGAGGCACGGACACGCCTGGTTATaGCCCCTGGTTATTGCCACT +
Preference number: 5 (lower is better)
Translates to: VCMVVGVSYRVWLSQERHGHAWL*PLVIAT
Trigger: AGTGGCAATAACCAGGGGCAATAACCAGGCGTGTCC...GTGCCTCTCCTGGGACAACCAGACTCTGTAACTCACCCCCACCACCATACACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CAA 90 bp TCTGAGGAGTCCTTTTCTCTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGCTCCTCCAGAGCCCCTaGCGGTCCAGCAACCCCTTG +
Preference number: 5 (lower is better)
Translates to: SEESFSLGASYPRAMWSKLLQSP*RSSNPL
Trigger: CAAGGGGTTGCTGGACCGCAAGGGGCTCTGGAGGAG...CTTTGACCACATCGCTCTAGGATAACTGGCACCCAGAGAAAAGGACTCCTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CAA 90 bp CTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGGGCCTGGGTATAGCAGGGTCATaGGGGCCGCAGAGAACTGAG +
Preference number: 5 (lower is better)
Translates to: LGASYPRAMWSKGCHLGLGIAGS*GPQRTE
Trigger: CTCAGTTCTCTGCGGCCCCAATGACCCTGCTATACC...CAGGCCCAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGCACCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CAA 90 bp GCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGGGCCTGTGTTCCAAGGAGAACTCGGCATaGCGCACCCAGGTCTTGGCC +
Preference number: 5 (lower is better)
Translates to: ASYPRAMWSKGCHLGLCSKENSA*RTQVLA
Trigger: GGCCAAGACCTGGGTGCGCAATGCCGAGTTCTCCTT...GGAACACAGGCCCAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CAA 90 bp GAGTTGGGTGACCATAAGGTCCAATCAGTGGATGCTAGTGGGCCCTGGGGCGGGGAGCTCTCTGTCATCTaGGACAGACTCATCACTTGG +
Preference number: 5 (lower is better)
Translates to: ELGDHKVQSVDASGPWGGELSVI*DRLITW
Trigger: CCAAGTGATGAGTCTGTCCAAGATGACAGAGAGCTC...CCCGCCCCAGGGCCCACTAGCATCCACTGATTGGACCTTATGGTCACCCAACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
CDS-3UTR CAA 90 bp GCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGGGCCTGTGTTCCATGCTGGGTGGCAGGTaGGGCATCCAAGCACAGGAG +
Preference number: 5 (lower is better)
Translates to: ASYPRAMWSKGCHLGLCSMLGGR*GIQAQE
Trigger: CTCCTGTGCTTGGATGCCCAACCTGCCACCCAGCAT...GGAACACAGGCCCAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CAA 90 bp TGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGGGCCTGTGGCTCTGCGGGCACTTaGAGGCTTGGAGCCTCCAAA +
Preference number: 5 (lower is better)
Translates to: WVPVILERCGQRDVIWACGSAGT*RLGASK
Trigger: TTTGGAGGCTCCAAGCCTCAAAGTGCCCGCAGAGCC...ACAGGCCCAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGCACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CAA 90 bp TGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGGGCCTGTCTGCGCCCAGTCTCTTaGGCAGCCACTTCTTGGTGG +
Preference number: 5 (lower is better)
Translates to: WVPVILERCGQRDVIWACLRPVS*AATSWW
Trigger: CCACCAAGAAGTGGCTGCCAAAGAGACTGGGCGCAG...ACAGGCCCAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGCACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
CDS-3UTR CAA 90 bp ACTAGCAAAACCCTCAAGGTGGGCTCTGCGGGCACTTTGAGGCTTGGAGCCTCCTATTGCCCCTGGTTATaGCCACTGACTCCAAGCCCA +
Preference number: 5 (lower is better)
Translates to: TSKTLKVGSAGTLRLGASYCPWL*PLTPSP
Trigger: TGGGCTTGGAGTCAGTGGCAATAACCAGGGGCAATA...GGAGGCTCCAAGCCTCAAAGTGCCCGCAGAGCCCACCTTGAGGGTTTTGCTAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380173.6
CDS-3UTR CAA 90 bp TGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGGGCCTGTCCGATGCCTGTGGACTaGAAGAGAGGGTGGCAGTGG +
Preference number: 5 (lower is better)
Translates to: WVPVILERCGQRDVIWACPMPVD*KRGWQW
Trigger: CCACTGCCACCCTCTCTTCAAGTCCACAGGCATCGG...ACAGGCCCAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGCACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380173.6
CDS TCA 90 bp CAGCCTGGGCTCTGGTATAGCAGGGTCATTGGGGCCGCAGAGAACTaGGGCTTCCCATTAATGACATTGGTCTGGATGCCAGAGAGGATG +
Preference number: 5 (lower is better)
Translates to: QPGLWYSRVIGAAEN*GFPLMTLVWMPERM
Trigger: CATCCTCTCTGGCATCCAGACCAATGTCATTAATGGGAAGCCTCAGTTCTCTGCGGCCCCAATGACCCTGCTATACCAGAGCCCAGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000571240.1
ENST00000572022.5
ENST00000573359.1
CDS CCA 90 bp CACTGCACCCCAGATCTGCATCCCATCATCACGGTAGTAGTAGCCTaGGATGTCTTCAACTCCTCGGGTCCGGATATCCTCAGGCAGACA +
Preference number: 5 (lower is better)
Translates to: HCTPDLHPIITVVVA*DVFNSSGPDILRQT
Trigger: TGTCTGCCTGAGGATATCCGGACCCGAGGAGTTGAAGACATCCCAGGCTACTACTACCGTGATGATGGGATGCAGATCTGGGGTGCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000571240.1
ENST00000572022.5
CDS-3UTR CAA 90 bp GCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGGGCCTGTGTTCCATGCTGACAGACACTTaGTCCCATGTGCCAGCCCCG +
Preference number: 5 (lower is better)
Translates to: ASYPRAMWSKGCHLGLCSMLTDT*SHVPAP
Trigger: CGGGGCTGGCACATGGGACAAAGTGTCTGTCAGCAT...GGAACACAGGCCCAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CAA 90 bp TCTGAGGAGTCCTTTTCTCTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGTCTGCCCAGGACACCTaGGCTGTACCCTCCTGCAGC +
Preference number: 5 (lower is better)
Translates to: SEESFSLGASYPRAMWSKSAQDT*AVPSCS
Trigger: GCTGCAGGAGGGTACAGCCAAGGTGTCCTGGGCAGA...CTTTGACCACATCGCTCTAGGATAACTGGCACCCAGAGAAAAGGACTCCTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CAA 90 bp TTTTCTCTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGCTCCTCCAGAGCCCCTaGCGGTCCAGCAACCCCTTG +
Preference number: 5 (lower is better)
Translates to: FSLGASYPRAMWSKGCHLLLQSP*RSSNPL
Trigger: CAAGGGGTTGCTGGACCGCAAGGGGCTCTGGAGGAG...CAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGCACCCAGAGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CAA 90 bp CCTCAAGGTGGGCTCTGCGGGCACTTTGAGGCTTGGAGCCTCCAAAAGACTCAGGGGGTCCTCCGGAAGTaGAAGATCCTTTTCATCTCA +
Preference number: 5 (lower is better)
Translates to: PQGGLCGHFEAWSLQKTQGVLRK*KILFIS
Trigger: TGAGATGAAAAGGATCTTCAACTTCCGGAGGACCCC...CTGAGTCTTTTGGAGGCTCCAAGCCTCAAAGTGCCCGCAGAGCCCACCTTGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
CDS-3UTR CAA 90 bp GCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGGGCCTGTGTTCCGGTATAGCAGGGTCATaGGGGCCGCAGAGAACTGAG +
Preference number: 5 (lower is better)
Translates to: ASYPRAMWSKGCHLGLCSGIAGS*GPQRTE
Trigger: CTCAGTTCTCTGCGGCCCCAATGACCCTGCTATACC...GGAACACAGGCCCAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CAA 90 bp GCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGGGCCTGTGTTCCCTGACAGCCGCATGCTaGGCGGAGCAGGTGAATATC +
Preference number: 5 (lower is better)
Translates to: ASYPRAMWSKGCHLGLCSLTAAC*AEQVNI
Trigger: GATATTCACCTGCTCCGCCAAGCATGCGGCTGTCAG...GGAACACAGGCCCAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CAA 90 bp TCTGAGGAGTCCTTTTCTCTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGCATGTTGCCAGGCCTTaGGAGGTGGGTGGTGGCAGC +
Preference number: 5 (lower is better)
Translates to: SEESFSLGASYPRAMWSKHVARP*EVGGGS
Trigger: GCTGCCACCACCCACCTCCAAAGGCCTGGCAACATG...CTTTGACCACATCGCTCTAGGATAACTGGCACCCAGAGAAAAGGACTCCTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CAA 90 bp CTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGGGCCTGACATCACATGTGGCATaGACAGGTGGGAGGGTGGCT +
Preference number: 5 (lower is better)
Translates to: LGASYPRAMWSKGCHLGLTSHVA*TGGRVA
Trigger: AGCCACCCTCCCACCTGTCAATGCCACATGTGATGT...CAGGCCCAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGCACCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS TCA 90 bp GGCTTCCCATTAATGACATTGGTCTGGATGCCAGAGAGGATGCCGTaGTCCACCAAGAACAGGGAGCCCTTCTCTAGCTCAGCCTGCAAG +
Preference number: 5 (lower is better)
Translates to: GFPLMTLVWMPERMP*STKNREPFSSSACK
Trigger: CTTGCAGGCTGAGCTAGAGAAGGGCTCCCTGTTCTTGGTGGATCACGGCATCCTCTCTGGCATCCAGACCAATGTCATTAATGGGAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000571240.1
ENST00000572022.5
ENST00000573359.1
CDS CCA 90 bp GGGTATACCCCAGATCTGCATCCCATCATCACGGTAGTAGTAGCCTaGGATGTCTTCAACTCCTCGGGTCCGGATATCCTCAGGCAGACA +
Preference number: 5 (lower is better)
Translates to: GYTPDLHPIITVVVA*DVFNSSGPDILRQT
Trigger: TGTCTGCCTGAGGATATCCGGACCCGAGGAGTTGAAGACATCCCAGGCTACTACTACCGTGATGATGGGATGCAGATCTGGGGTATACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573359.1
CDS-3UTR CAA 90 bp GCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGGGCCTGTGTTCCGGACACGCCTGGTTATaGCCCCTGGTTATTGCCACT +
Preference number: 5 (lower is better)
Translates to: ASYPRAMWSKGCHLGLCSGHAWL*PLVIAT
Trigger: AGTGGCAATAACCAGGGGCAATAACCAGGCGTGTCC...GGAACACAGGCCCAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CAA 90 bp TTTTCTCTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGCCCGCAGTGAACTCCTaGCCGAGATTGTCCAGGGGC +
Preference number: 5 (lower is better)
Translates to: FSLGASYPRAMWSKGCHLPAVNS*PRLSRG
Trigger: GCCCCTGGACAATCTCGGCAAGGAGTTCACTGCGGG...CAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGCACCCAGAGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CAA 90 bp TCTGAGGAGTCCTTTTCTCTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGTGCGGGATCAGCAGCTaGAAGAGAGGGTGGCAGTGG +
Preference number: 5 (lower is better)
Translates to: SEESFSLGASYPRAMWSKCGISS*KRGWQW
Trigger: CCACTGCCACCCTCTCTTCAAGCTGCTGATCCCGCA...CTTTGACCACATCGCTCTAGGATAACTGGCACCCAGAGAAAAGGACTCCTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CAA 90 bp GTGTGTATGGTGGTGGGGGTGAGTTACAGAGTCTGGTTGTCCCAGGAGAGGCACTGGTTTAGGAAGCCCTaGGAGAAGATCTCTCTGACC +
Preference number: 5 (lower is better)
Translates to: VCMVVGVSYRVWLSQERHWFRKP*EKISLT
Trigger: GGTCAGAGAGATCTTCTCCAAGGGCTTCCTAAACCA...GTGCCTCTCCTGGGACAACCAGACTCTGTAACTCACCCCCACCACCATACACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CAA 90 bp TCTGAGGAGTCCTTTTCTCTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGATGCTGGGTGGCAGGTaGGGCATCCAAGCACAGGAG +
Preference number: 5 (lower is better)
Translates to: SEESFSLGASYPRAMWSKMLGGR*GIQAQE
Trigger: CTCCTGTGCTTGGATGCCCAACCTGCCACCCAGCAT...CTTTGACCACATCGCTCTAGGATAACTGGCACCCAGAGAAAAGGACTCCTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CAA 90 bp TTTCTGAGGAGTCCTTTTCTCTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAACATGTTGCCAGGCCTTaGGAGGTGGGTGGTGGCAGC +
Preference number: 5 (lower is better)
Translates to: FLRSPFLWVPVILERCGQHVARP*EVGGGS
Trigger: GCTGCCACCACCCACCTCCAAAGGCCTGGCAACATG...TTGACCACATCGCTCTAGGATAACTGGCACCCAGAGAAAAGGACTCCTCAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CAA 90 bp CTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGGGCCTGTTTGGCAGCCACTTCTaGGTGGCTGTCCTTGAGTTG +
Preference number: 5 (lower is better)
Translates to: LGASYPRAMWSKGCHLGLFGSHF*VAVLEL
Trigger: CAACTCAAGGACAGCCACCAAGAAGTGGCTGCCAAA...CAGGCCCAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGCACCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
CDS CCA 90 bp TGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTaGGCCTGTGTTCCCCTGGGATTTAGATGGAGACGCTGTTCTCGA +
Preference number: 5 (lower is better)
Translates to: WVPVILERCGQRDVI*ACVPLGFRWRRCSR
Trigger: TCGAGAACAGCGTCTCCATCTAAATCCCAGGGGAACACAGGCCCAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGCACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000571240.1
ENST00000572022.5
CDS-3UTR CAA 90 bp GACCATAAGGTCCAATCAGTGGATGCTAGTGGGCCCTGGGGCGGGATTATGTGCCGGTCCAGCAACCCCTaGATTTTCATCTCTGCAAAA +
Preference number: 5 (lower is better)
Translates to: DHKVQSVDASGPWGGIMCRSSNP*IFISAK
Trigger: TTTTGCAGAGATGAAAATCAAGGGGTTGCTGGACCG...GCACATAATCCCGCCCCAGGGCCCACTAGCATCCACTGATTGGACCTTATGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
CDS-3UTR CAA 90 bp TCTGAGGAGTCCTTTTCTCTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGGTATAGCAGGGTCATaGGGGCCGCAGAGAACTGAG +
Preference number: 5 (lower is better)
Translates to: SEESFSLGASYPRAMWSKGIAGS*GPQRTE
Trigger: CTCAGTTCTCTGCGGCCCCAATGACCCTGCTATACC...CTTTGACCACATCGCTCTAGGATAACTGGCACCCAGAGAAAAGGACTCCTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CAA 90 bp TTTTCTCTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGAAGGAGAACTCGGCATaGCGCACCCAGGTCTTGGCC +
Preference number: 5 (lower is better)
Translates to: FSLGASYPRAMWSKGCHLKENSA*RTQVLA
Trigger: GGCCAAGACCTGGGTGCGCAATGCCGAGTTCTCCTT...CAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGCACCCAGAGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CAA 90 bp TTTCTGAGGAGTCCTTTTCTCTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAATCCCGGGCGAGTGTGTaGATGTGCAGGGTGTATCGG +
Preference number: 5 (lower is better)
Translates to: FLRSPFLWVPVILERCGQSRASV*MCRVYR
Trigger: CCGATACACCCTGCACATCAACACACTCGCCCGGGA...TTGACCACATCGCTCTAGGATAACTGGCACCCAGAGAAAAGGACTCCTCAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CAA 90 bp CTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGGGCCTGGAGCTCTCTGTCATCTaGGACAGACTCATCACTTGG +
Preference number: 5 (lower is better)
Translates to: LGASYPRAMWSKGCHLGLELSVI*DRLITW
Trigger: CCAAGTGATGAGTCTGTCCAAGATGACAGAGAGCTC...CAGGCCCAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGCACCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
CDS-3UTR CAA 90 bp TCTGAGGAGTCCTTTTCTCTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGCTGACAGCCGCATGCTaGGCGGAGCAGGTGAATATC +
Preference number: 5 (lower is better)
Translates to: SEESFSLGASYPRAMWSKLTAAC*AEQVNI
Trigger: GATATTCACCTGCTCCGCCAAGCATGCGGCTGTCAG...CTTTGACCACATCGCTCTAGGATAACTGGCACCCAGAGAAAAGGACTCCTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CAA 90 bp TGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGGGCCTGTGTGGCTGTCCTTGAGTaGGGTGACCATAAGGTCCAA +
Preference number: 5 (lower is better)
Translates to: WVPVILERCGQRDVIWACVAVLE*GDHKVQ
Trigger: TTGGACCTTATGGTCACCCAACTCAAGGACAGCCAC...ACAGGCCCAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGCACCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
CDS-3UTR CAA 90 bp GCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGGGCCTGTGTTCCTTTGGCAGCCACTTCTaGGTGGCTGTCCTTGAGTTG +
Preference number: 5 (lower is better)
Translates to: ASYPRAMWSKGCHLGLCSFGSHF*VAVLEL
Trigger: CAACTCAAGGACAGCCACCAAGAAGTGGCTGCCAAA...GGAACACAGGCCCAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
CDS-3UTR CAA 90 bp GCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGGGCCTGTGTTCCTATTGCCCCTGGTTATaGCCACTGACTCCAAGCCCA +
Preference number: 5 (lower is better)
Translates to: ASYPRAMWSKGCHLGLCSYCPWL*PLTPSP
Trigger: TGGGCTTGGAGTCAGTGGCAATAACCAGGGGCAATA...GGAACACAGGCCCAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000572022.5
CDS-3UTR CAA 90 bp TCTGAGGAGTCCTTTTCTCTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGGACACGCCTGGTTATaGCCCCTGGTTATTGCCACT +
Preference number: 5 (lower is better)
Translates to: SEESFSLGASYPRAMWSKGHAWL*PLVIAT
Trigger: AGTGGCAATAACCAGGGGCAATAACCAGGCGTGTCC...CTTTGACCACATCGCTCTAGGATAACTGGCACCCAGAGAAAAGGACTCCTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CAA 90 bp TTTCTGAGGAGTCCTTTTCTCTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAATGCTGACAGACACTTaGTCCCATGTGCCAGCCCCG +
Preference number: 5 (lower is better)
Translates to: FLRSPFLWVPVILERCGQMLTDT*SHVPAP
Trigger: CGGGGCTGGCACATGGGACAAAGTGTCTGTCAGCAT...TTGACCACATCGCTCTAGGATAACTGGCACCCAGAGAAAAGGACTCCTCAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CAA 90 bp CCTCAAGGTGGGCTCTGCGGGCACTTTGAGGCTTGGAGCCTCCAAAAGACTCAGGTGGAGTATTTGATATaGAGCTCCAAGTCTTCCACT +
Preference number: 5 (lower is better)
Translates to: PQGGLCGHFEAWSLQKTQVEYLI*SSKSST
Trigger: AGTGGAAGACTTGGAGCTCAATATCAAATACTCCAC...CTGAGTCTTTTGGAGGCTCCAAGCCTCAAAGTGCCCGCAGAGCCCACCTTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
CDS-3UTR CAA 90 bp ACTAGCAAAACCCTCAAGGTGGGCTCTGCGGGCACTTTGAGGCTTGGAGCCTCCGTGGAGTATTTGATATaGAGCTCCAAGTCTTCCACT +
Preference number: 5 (lower is better)
Translates to: TSKTLKVGSAGTLRLGASVEYLI*SSKSST
Trigger: AGTGGAAGACTTGGAGCTCAATATCAAATACTCCAC...GGAGGCTCCAAGCCTCAAAGTGCCCGCAGAGCCCACCTTGAGGGTTTTGCTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
CDS-3UTR CAA 90 bp TGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGGGCCTGTGGGGTCCTCCGGAAGTaGAAGATCCTTTTCATCTCA +
Preference number: 5 (lower is better)
Translates to: WVPVILERCGQRDVIWACGVLRK*KILFIS
Trigger: TGAGATGAAAAGGATCTTCAACTTCCGGAGGACCCC...ACAGGCCCAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGCACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CAA 90 bp CTCTTTGGCAGCCACTTCTTGGTGGCTGTCCTTGAGTTGGGTGACCATAAGGTCTGGTTTAGGAAGCCCTaGGAGAAGATCTCTCTGACC +
Preference number: 5 (lower is better)
Translates to: LFGSHFLVAVLELGDHKVWFRKP*EKISLT
Trigger: GGTCAGAGAGATCTTCTCCAAGGGCTTCCTAAACCA...GACCTTATGGTCACCCAACTCAAGGACAGCCACCAAGAAGTGGCTGCCAAAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
CDS-3UTR CAA 90 bp GCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGGGCCTGTGTTCCTGGTTTAGGAAGCCCTaGGAGAAGATCTCTCTGACC +
Preference number: 5 (lower is better)
Translates to: ASYPRAMWSKGCHLGLCSWFRKP*EKISLT
Trigger: GGTCAGAGAGATCTTCTCCAAGGGCTTCCTAAACCA...GGAACACAGGCCCAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CAA 90 bp GCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGGGCCTGTGTTCCGAGCTCTCTGTCATCTaGGACAGACTCATCACGTTC +
Preference number: 5 (lower is better)
Translates to: ASYPRAMWSKGCHLGLCSELSVI*DRLITF
Trigger: GAACGTGATGAGTCTGTCCAAGATGACAGAGAGCTC...GGAACACAGGCCCAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572022.5
CDS CCA 90 bp GACCCAGGCCTGGAGCTCTCTGTCATCTTGGACAGACTCATCACTTaGGTAGTAGATACCGATGATTTCAGAGACAAAGCGTTCCACTGC +
Preference number: 5 (lower is better)
Translates to: DPGLELSVILDRLIT*VVDTDDFRDKAFHC
Trigger: GCAGTGGAACGCTTTGTCTCTGAAATCATCGGTATCTACTACCCAAGTGATGAGTCTGTCCAAGATGACAGAGAGCTCCAGGCCTGGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000571240.1
CDS-3UTR CAA 90 bp GTGTGTATGGTGGTGGGGGTGAGTTACAGAGTCTGGTTGTCCCAGGAGAGGCACGTGGAGTATTTGATATaGAGCTCCAAGTCTTCCACT +
Preference number: 5 (lower is better)
Translates to: VCMVVGVSYRVWLSQERHVEYLI*SSKSST
Trigger: AGTGGAAGACTTGGAGCTCAATATCAAATACTCCAC...GTGCCTCTCCTGGGACAACCAGACTCTGTAACTCACCCCCACCACCATACACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CAA 90 bp TGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGGGCCTGTCGGTCCAGCAACCCCTaGATTTTCATCTCTGCAAAA +
Preference number: 5 (lower is better)
Translates to: WVPVILERCGQRDVIWACRSSNP*IFISAK
Trigger: TTTTGCAGAGATGAAAATCAAGGGGTTGCTGGACCG...ACAGGCCCAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGCACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CAA 90 bp TGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGGGCCTGTTTCCCATTAATGACATaGGTCTGGATGCCAGAGAGG +
Preference number: 5 (lower is better)
Translates to: WVPVILERCGQRDVIWACFPLMT*VWMPER
Trigger: CCTCTCTGGCATCCAGACCAATGTCATTAATGGGAA...ACAGGCCCAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGCACCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CAA 90 bp GCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGGGCCTGTGTTCCTTCCCATTAATGACATaGGTCTGGATGCCAGAGAGG +
Preference number: 5 (lower is better)
Translates to: ASYPRAMWSKGCHLGLCSFPLMT*VWMPER
Trigger: CCTCTCTGGCATCCAGACCAATGTCATTAATGGGAA...GGAACACAGGCCCAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CAA 90 bp GTGTGTATGGTGGTGGGGGTGAGTTACAGAGTCTGGTTGTCCCAGGAGAGGCACCCTGAGACTCTGTTCTaGGTAGATTTTCTGCTTTCT +
Preference number: 5 (lower is better)
Translates to: VCMVVGVSYRVWLSQERHPETLF*VDFLLS
Trigger: AGAAAGCAGAAAATCTACCAAGAACAGAGTCTCAGG...GTGCCTCTCCTGGGACAACCAGACTCTGTAACTCACCCCCACCACCATACACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CAA 90 bp TCTGAGGAGTCCTTTTCTCTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGTGGCTGTCCTTGAGTaGGGTGACCATAAGGTCCAA +
Preference number: 5 (lower is better)
Translates to: SEESFSLGASYPRAMWSKVAVLE*GDHKVQ
Trigger: TTGGACCTTATGGTCACCCAACTCAAGGACAGCCAC...CTTTGACCACATCGCTCTAGGATAACTGGCACCCAGAGAAAAGGACTCCTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380173.6
ENST00000380183.9
CDS-3UTR CAA 90 bp TCTGAGGAGTCCTTTTCTCTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGGGGTCCTCCGGAAGTaGAAGATCCTTTTCATCTCA +
Preference number: 5 (lower is better)
Translates to: SEESFSLGASYPRAMWSKGVLRK*KILFIS
Trigger: TGAGATGAAAAGGATCTTCAACTTCCGGAGGACCCC...CTTTGACCACATCGCTCTAGGATAACTGGCACCCAGAGAAAAGGACTCCTCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CAA 90 bp TCTGAGGAGTCCTTTTCTCTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGCGGTCCAGCAACCCCTaGATTTTCATCTCTGCAAAA +
Preference number: 5 (lower is better)
Translates to: SEESFSLGASYPRAMWSKRSSNP*IFISAK
Trigger: TTTTGCAGAGATGAAAATCAAGGGGTTGCTGGACCG...CTTTGACCACATCGCTCTAGGATAACTGGCACCCAGAGAAAAGGACTCCTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CAA 90 bp TCTGAGGAGTCCTTTTCTCTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGTTCCCATTAATGACATaGGTCTGGATGCCAGAGAGG +
Preference number: 5 (lower is better)
Translates to: SEESFSLGASYPRAMWSKFPLMT*VWMPER
Trigger: CCTCTCTGGCATCCAGACCAATGTCATTAATGGGAA...CTTTGACCACATCGCTCTAGGATAACTGGCACCCAGAGAAAAGGACTCCTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CAA 90 bp TGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGGGCCTGTCCTGAGACTCTGTTCTaGGTAGATTTTCTGCTTTCT +
Preference number: 5 (lower is better)
Translates to: WVPVILERCGQRDVIWACPETLF*VDFLLS
Trigger: AGAAAGCAGAAAATCTACCAAGAACAGAGTCTCAGG...ACAGGCCCAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGCACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CAA 90 bp TCTGAGGAGTCCTTTTCTCTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGTTGGCTGTGGAGTATTaGATATTGAGCTCCAAGTCT +
Preference number: 5 (lower is better)
Translates to: SEESFSLGASYPRAMWSKLAVEY*ILSSKS
Trigger: AGACTTGGAGCTCAATATCAAATACTCCACAGCCAA...CTTTGACCACATCGCTCTAGGATAACTGGCACCCAGAGAAAAGGACTCCTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CAA 90 bp TTTTCTCTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTGTTGGCTGTGGAGTATTaGATATTGAGCTCCAAGTCT +
Preference number: 5 (lower is better)
Translates to: FSLGASYPRAMWSKGCHLLAVEY*ILSSKS
Trigger: AGACTTGGAGCTCAATATCAAATACTCCACAGCCAA...CAGATGACATCCCTTTGACCACATCGCTCTAGGATAACTGGCACCCAGAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS-3UTR CAA 90 bp TTTCTGAGGAGTCCTTTTCTCTGGGTGCCAGTTATCCTAGAGCGATGTGGTCAACCTGAGACTCTGTTCTaGGTAGATTTTCTGCTTTCT +
Preference number: 5 (lower is better)
Translates to: FLRSPFLWVPVILERCGQPETLF*VDFLLS
Trigger: AGAAAGCAGAAAATCTACCAAGAACAGAGTCTCAGG...TTGACCACATCGCTCTAGGATAACTGGCACCCAGAGAAAAGGACTCCTCAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000572022.5
CDS CCA 72 bp GGGAAGAGGAGGTGGCCGCCCCGCGGCGGTGTCAGCTaGAACCAGCGGCAGAACCAGGCATCCGGGGCCAGG +
Preference number: 6 (lower is better)
Translates to: GKRRWPPRGGVS*NQRQNQASGAR
Trigger: CCTGGCCCCGGATGCCTGGTTCTGCCGCTGGTTCCAGCTGACACCGCCGCGGGGCGGCCACCTCCTCTTCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000571240.1
ENST00000572022.5
ENST00000573359.1
CDS CCA 72 bp AGCTCCTCCTGGCGCTGTTGCTGGAGCACAGGGTGGTaGTCTGCCCAGGACACCTTGGCTGTACCCTCCTGC +
Preference number: 6 (lower is better)
Translates to: SSSWRCCWSTGW*SAQDTLAVPSC
Trigger: GCAGGAGGGTACAGCCAAGGTGTCCTGGGCAGACCACCACCCTGTGCTCCAGCAACAGCGCCAGGAGGAGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000571240.1
ENST00000572022.5
ENST00000573359.1
CDS GCA 72 bp AGGAACTGGGAGGCGAAGAAGGCGTCCTCCTGCCAGTaGTCAAATGCGTGCTCAGCTGCTGGGGTCCTCCGG +
Preference number: 6 (lower is better)
Translates to: RNWEAKKASSCQ*SNACSAAGVLR
Trigger: CCGGAGGACCCCAGCAGCTGAGCACGCATTTGAGCACTGGCAGGAGGACGCCTTCTTCGCCTCCCAGTTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000571240.1
ENST00000572022.5
ENST00000573359.1
CDS GCA 72 bp CCTTCAATGCCGATGCCTGTGGACCTGTCCACCACCTaGCCTGGCACGATAAGCAGCTCCCGGGCGAGTGTG +
Preference number: 6 (lower is better)
Translates to: PSMPMPVDLSTT*PGTISSSRASV
Trigger: CACACTCGCCCGGGAGCTGCTTATCGTGCCAGGGCAGGTGGTGGACAGGTCCACAGGCATCGGCATTGAAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380183.9
ENST00000571240.1
ENST00000572022.5
CDS GCA 72 bp GACAGGTGGGAGGGTGGCTATGAAGCCCTCGCATGTTaGCAGGCCTTTGGAGGTGGGTGGTGGCAGCTGCAT +
Preference number: 6 (lower is better)
Translates to: DRWEGGYEALAC*QAFGGGWWQLH
Trigger: ATGCAGCTGCCACCACCCACCTCCAAAGGCCTGGCAACATGCGAGGGCTTCATAGCCACCCTCCCACCTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000571240.1
ENST00000572022.5
ENST00000573359.1
CDS CCA 72 bp GGGAGACCCTTCCCTGTCAGCCAGCCTTATGCCTCTTaGGATCCTGAACCAGCCTCCGGGCCCAAGGTAGTC +
Preference number: 6 (lower is better)
Translates to: GRPFPVSQPYAS*DPEPASGPKVV
Trigger: GACTACCTTGGGCCCGGAGGCTGGTTCAGGATCCCAAGAGGCATAAGGCTGGCTGACAGGGAAGGGTCTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571240.1
CDS CAA 72 bp TGCCCTGGCACGATAAGCAGCTCCCGGGCGAGTGTGTaGATGTGCAGGGTGTATCGGGTGTGCGGGATCAGC +
Preference number: 6 (lower is better)
Translates to: CPGTISSSRASV*MCRVYRVCGIS
Trigger: GCTGATCCCGCACACCCGATACACCCTGCACATCAACACACTCGCCCGGGAGCTGCTTATCGTGCCAGGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380183.9
ENST00000571240.1
ENST00000572022.5
CDS GCA 72 bp CCATTCAGGAACTGGGAGGCGAAGAAGGCGTCCTCCTaGCAGTGCTCAAATGCGTGCTCAGCTGCTGGGGTC +
Preference number: 6 (lower is better)
Translates to: PFRNWEAKKASS*QCSNACSAAGV
Trigger: GACCCCAGCAGCTGAGCACGCATTTGAGCACTGGCAGGAGGACGCCTTCTTCGCCTCCCAGTTCCTGAATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000571240.1
ENST00000572022.5
ENST00000573359.1
CDS TCA 72 bp AGACCTCAGGCAGCAGATGTGAGTGCAGCAGGTGCGTaGGGGCCTCATGGAAGGAGAACTCGGCATTGCGCA +
Preference number: 6 (lower is better)
Translates to: RPQAADVSAAGA*GPHGRRTRHCA
Trigger: TGCGCAATGCCGAGTTCTCCTTCCATGAGGCCCTCACGCACCTGCTGCACTCACATCTGCTGCCTGAGGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000571240.1
ENST00000572022.5
ENST00000573359.1
CDS CCA 72 bp AGCAGATGTGAGTGCAGCAGGTGCGTGAGGGCCTCATaGAAGGAGAACTCGGCATTGCGCACCCAGGTCTTG +
Preference number: 6 (lower is better)
Translates to: SRCECSRCVRAS*KENSALRTQVL
Trigger: CAAGACCTGGGTGCGCAATGCCGAGTTCTCCTTCCATGAGGCCCTCACGCACCTGCTGCACTCACATCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000571240.1
ENST00000572022.5
ENST00000573359.1
CDS GCA 72 bp GCACAGGAGTCAAACTGCCCTGCACTGACAGCCGCATaGTTGGCGGAGCAGGTGAATATCACCATGGTGACA +
Preference number: 6 (lower is better)
Translates to: AQESNCPALTAA*LAEQVNITMVT
Trigger: TGTCACCATGGTGATATTCACCTGCTCCGCCAAGCATGCGGCTGTCAGTGCAGGGCAGTTTGACTCCTGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000571240.1
ENST00000572022.5
ENST00000573359.1
CDS CAA 90 bp ATCCAAGCACAGGAGTCAAACTGCCCTGCACTGACAGCCGCATGCTaGGCGGAGCAGGTGAATATCACCATGGTGACATACTGCACCAGG +
Preference number: 6 (lower is better)
Translates to: IQAQESNCPALTAAC*AEQVNITMVTYCTR
Trigger: CCTGGTGCAGTATGTCACCATGGTGATATTCACCTGCTCCGCCAAGCATGCGGCTGTCAGTGCAGGGCAGTTTGACTCCTGTGCTTGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000571240.1
ENST00000572022.5
ENST00000573359.1
CDS CAA 72 bp CAGGAGTCAAACTGCCCTGCACTGACAGCCGCATGCTaGGCGGAGCAGGTGAATATCACCATGGTGACATAC +
Preference number: 6 (lower is better)
Translates to: QESNCPALTAAC*AEQVNITMVTY
Trigger: GTATGTCACCATGGTGATATTCACCTGCTCCGCCAAGCATGCGGCTGTCAGTGCAGGGCAGTTTGACTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000571240.1
ENST00000572022.5
ENST00000573359.1
CDS GCA 72 bp TCATGTTCCTCTGTATCAACTCAGAGAAGCCTTCAATaGCGATGCCTGTGGACCTGTCCACCACCTGCCCTG +
Preference number: 6 (lower is better)
Translates to: SCSSVSTQRSLQ*RCLWTCPPPAL
Trigger: CAGGGCAGGTGGTGGACAGGTCCACAGGCATCGGCATTGAAGGCTTCTCTGAGTTGATACAGAGGAACATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380183.9
ENST00000571240.1
ENST00000572022.5
CDS CCA 72 bp TTCCACTGTCTTTTCATCCAGGCAGTGAGGCCAACCTaGGTTGTAAGCCTTCCACTGGTACATCTCCTGCCG +
Preference number: 6 (lower is better)
Translates to: FHCLFIQAVRPT*VVSLPLVHLLP
Trigger: CGGCAGGAGATGTACCAGTGGAAGGCTTACAACCCAGGTTGGCCTCACTGCCTGGATGAAAAGACAGTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000571240.1
ENST00000572022.5
ENST00000573359.1
CDS CCA 72 bp CCAGATCTGCATCCCATCATCACGGTAGTAGTAGCCTaGGATGTCTTCAACTCCTCGGGTCCGGATATCCTC +
Preference number: 6 (lower is better)
Translates to: PDLHPIITVVVA*DVFNSSGPDIL
Trigger: GAGGATATCCGGACCCGAGGAGTTGAAGACATCCCAGGCTACTACTACCGTGATGATGGGATGCAGATCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000571240.1
ENST00000572022.5
ENST00000573359.1
CDS CCA 72 bp GTTATCCTAGAGCGATGTGGTCAAAGGGATGTCATCTaGGCCTGTGTTCCCCTGGGATTTAGATGGAGACGC +
Preference number: 6 (lower is better)
Translates to: VILERCGQRDVI*ACVPLGFRWRR
Trigger: GCGTCTCCATCTAAATCCCAGGGGAACACAGGCCCAGATGACATCCCTTTGACCACATCGCTCTAGGATAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000571240.1
ENST00000572022.5
CDS TCA 72 bp TTAATGACATTGGTCTGGATGCCAGAGAGGATGCCGTaGTCCACCAAGAACAGGGAGCCCTTCTCTAGCTCA +
Preference number: 6 (lower is better)
Translates to: LMTLVWMPERMP*STKNREPFSSS
Trigger: TGAGCTAGAGAAGGGCTCCCTGTTCTTGGTGGATCACGGCATCCTCTCTGGCATCCAGACCAATGTCATTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000571240.1
ENST00000572022.5
ENST00000573359.1
CDS CAA 72 bp TCAAATGCGTGCTCAGCTGCTGGGGTCCTCCGGAAGTaGAAGATCCTTTTCATCTCATTCAGACTCCTCCAG +
Preference number: 6 (lower is better)
Translates to: SNACSAAGVLRK*KILFISFRLLQ
Trigger: CTGGAGGAGTCTGAATGAGATGAAAAGGATCTTCAACTTCCGGAGGACCCCAGCAGCTGAGCACGCATTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000571240.1
ENST00000572022.5
ENST00000573359.1
CDS TCA 72 bp CTTGGACAGACTCATCACTTGGGTAGTAGATACCGATaGTTTCAGAGACAAAGCGTTCCACTGCACCCCAGA +
Preference number: 6 (lower is better)
Translates to: LGQTHHLGSRYR*FQRQSVPLHPR
Trigger: TCTGGGGTGCAGTGGAACGCTTTGTCTCTGAAATCATCGGTATCTACTACCCAAGTGATGAGTCTGTCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380173.6
ENST00000380183.9
ENST00000571240.1