Pregenerated sensors for ALOX12B (Homo sapiens)
Ensembl gene IDs: ENSG00000179477Ensembl transcript IDs: ENST00000577351.5, ENST00000583276.5, ENST00000584116.1, ENST00000647874.1, ENST00000649809.1, ENST00000650441.1
Found 48 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GGCTGCTCTTCAGGAGGCAAGAGGGGCACTCAGTCCCAGACACCGTaGAGGGGCCACACGAAGGCCCAAGGCAGGCAAGAGAAGCCAGGC | + |
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Preference number: 5 (lower is better) Translates to: GCSSGGKRGTQSQTP*RGHTKAQGRQEKPG Trigger: GCCTGGCTTCTCTTGCCTGCCTTGGGCCTTCGTGTGGCCCCTCCACGGTGTCTGGGACTGAGTGCCCCTCTTGCCTCCTGAAGAGCAGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000647874.1 |
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| CDS CCA 90 bp | GGGATGGGAAGGCACTTGTTGCGCTGGCGGATGTCGTGTGAGATCTaGTTCAGGCGCTGGCGGAACGCCTCTATGCTCCTCCGCGGGGCC | + |
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Preference number: 5 (lower is better) Translates to: GMGRHLLRWRMSCEI*FRRWRNASMLLRGA Trigger: GGCCCCGCGGAGGAGCATAGAGGCGTTCCGCCAGCGCCTGAACCAGATCTCACACGACATCCGCCAGCGCAACAAGTGCCTTCCCATCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000647874.1 ENST00000649809.1 ENST00000650441.1 |
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| CDS CCA 90 bp | CAGGCCGGTTGGGGTTGCGATGCCTCCGCACCGGAGGGCGGTAACTaGGAATGTGCACATAGCTGGGCAGGCCAGGAAGAAAGACTCGCC | + |
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Preference number: 5 (lower is better) Translates to: QAGWGCDASAPEGGN*ECAHSWAGQEERLA Trigger: GGCGAGTCTTTCTTCCTGGCCTGCCCAGCTATGTGCACATTCCCAGTTACCGCCCTCCGGTGCGGAGGCATCGCAACCCCAACCGGCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647874.1 |
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| CDS TCA 90 bp | TGGAGTCCCGTGTTCCCGACAAGAGGTCGGTGCCTGTGGCCACCCTaGCTTTGTAGGTGGCCATGGCTGCTCTTCAGGAGGCAAGAGGGG | + |
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Preference number: 5 (lower is better) Translates to: WSPVFPTRGRCLWPP*LCRWPWLLFRRQEG Trigger: CCCCTCTTGCCTCCTGAAGAGCAGCCATGGCCACCTACAAAGTCAGGGTGGCCACAGGCACCGACCTCTTGTCGGGAACACGGGACTCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647874.1 |
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| CDS TCA 90 bp | GTAGTAGGGGATGGGAAGGCACTTGTTGCGCTGGCGGATGTCGTGTaGGATCTGGTTCAGGCGCTGGCGGAACGCCTCTATGCTCCTCCG | + |
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Preference number: 5 (lower is better) Translates to: VVGDGKALVALADVV*DLVQALAERLYAPP Trigger: CGGAGGAGCATAGAGGCGTTCCGCCAGCGCCTGAACCAGATCTCACACGACATCCGCCAGCGCAACAAGTGCCTTCCCATCCCCTACTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000647874.1 ENST00000649809.1 ENST00000650441.1 |
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| CDS CCA 90 bp | GCTGCTTATGGCTCTCTCCTTGTGTCCCCACAATGGTCAGTGAGATaGAGTCCCGTGTTCCCGACAAGAGGTCGGTGCCTGTGGCCACCC | + |
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Preference number: 5 (lower is better) Translates to: AAYGSLLVSPQWSVR*SPVFPTRGRCLWPP Trigger: GGGTGGCCACAGGCACCGACCTCTTGTCGGGAACACGGGACTCCATCTCACTGACCATTGTGGGGACACAAGGAGAGAGCCATAAGCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647874.1 |
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| CDS TCA 90 bp | CAGCAGCTGCTTATGGCTCTCTCCTTGTGTCCCCACAATGGTCAGTaGGATGGAGTCCCGTGTTCCCGACAAGAGGTCGGTGCCTGTGGC | + |
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Preference number: 5 (lower is better) Translates to: QQLLMALSLCPHNGQ*DGVPCSRQEVGACG Trigger: GCCACAGGCACCGACCTCTTGTCGGGAACACGGGACTCCATCTCACTGACCATTGTGGGGACACAAGGAGAGAGCCATAAGCAGCTGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647874.1 |
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| CDS TCA 90 bp | AAGCCAGTGCCATGGGCCCCAGGCGGACGAAGAAGGAGGCCGTCTTaGGGAAGGAGTAGCGGAGATTTAAGTTCAGGAACTTGGTGGCCT | + |
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Preference number: 5 (lower is better) Translates to: KPVPWAPGGRRRRPS*GRSSGDLSSGTWWP Trigger: AGGCCACCAAGTTCCTGAACTTAAATCTCCGCTACTCCTTCCTCAAGACGGCCTCCTTCTTCGTCCGCCTGGGGCCCATGGCACTGGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647874.1 |
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| CDS CCA 90 bp | AGCCATCCATCCACTGGTAGGCGGGGAAGTGGTAGATACGGCCGTTaGGGGCACAGATCTGCACATAGTTGCAGTACCAAGGGTCCTTGG | + |
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Preference number: 5 (lower is better) Translates to: SHPSTGRRGSGRYGR*GHRSAHSCSTKGPW Trigger: CCAAGGACCCTTGGTACTGCAACTATGTGCAGATCTGTGCCCCCAACGGCCGTATCTACCACTTCCCCGCCTACCAGTGGATGGATGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000647874.1 |
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| CDS CCA 90 bp | AGTGGTCAGCCCCTTAGTCTGAATCGGTGGATTCCGCATGGACGCTaGGAAGTTGGGCATCCAGGCGGTGAACTCCATCTGGCCTGTGTT | + |
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Preference number: 5 (lower is better) Translates to: SGQPLSLNRWIPHGR*EVGHPGGELHLACV Trigger: AACACAGGCCAGATGGAGTTCACCGCCTGGATGCCCAACTTCCCAGCGTCCATGCGGAATCCACCGATTCAGACTAAGGGGCTGACCACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000647874.1 ENST00000649809.1 ENST00000650441.1 |
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| CDS GCA 90 bp | AAGCCTGAGCTCTCCCGCCCCAGGAGGCACTCTTTAAATATTTCCTaGACCCAAGACTGCAATTCCGGATCACCCTCCACGGCTGCGTCA | + |
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Preference number: 5 (lower is better) Translates to: KPELSRPRRHSLNIS*TQDCNSGSPSTAAS Trigger: TGACGCAGCCGTGGAGGGTGATCCGGAATTGCAGTCTTGGGTGCAGGAAATATTTAAAGAGTGCCTCCTGGGGCGGGAGAGCTCAGGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000647874.1 ENST00000649809.1 |
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| CDS CCA 90 bp | AGTGGTCAGCCCCTTAGTCTGAATCGGTGGATTCCGCATGGACGCTaGGAAGTTGGGCATCCAGGCGGTGAACTCCATTTCTCCAGTGCA | + |
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Preference number: 5 (lower is better) Translates to: SGQPLSLNRWIPHGR*EVGHPGGELHFSSA Trigger: TGCACTGGAGAAATGGAGTTCACCGCCTGGATGCCCAACTTCCCAGCGTCCATGCGGAATCCACCGATTCAGACTAAGGGGCTGACCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000577351.5 |
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| CDS CCA 90 bp | AGTGGTTCAGCAGCTGCTTATGGCTCTCTCCTTGTGTCCCCACAATaGTCAGTGAGATGGAGTCCCGTGTTCCCGACAAGAGGTCGGTGC | + |
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Preference number: 5 (lower is better) Translates to: SGSAAAYGSLLVSPQ*SVRWSPVFPTRGRC Trigger: GCACCGACCTCTTGTCGGGAACACGGGACTCCATCTCACTGACCATTGTGGGGACACAAGGAGAGAGCCATAAGCAGCTGCTGAACCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647874.1 |
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| CDS CCA 90 bp | ACGGTGTACTGGCCCACCGCCCCAGTTGCAAAGTCTCTCCCAAAGTaGTTCAGCAGCTGCTTATGGCTCTCTCCTTGTGTCCCCACAATG | + |
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Preference number: 5 (lower is better) Translates to: TVYWPTAPVAKSLPK*FSSCLWLSPCVPTM Trigger: CATTGTGGGGACACAAGGAGAGAGCCATAAGCAGCTGCTGAACCACTTTGGGAGAGACTTTGCAACTGGGGCGGTGGGCCAGTACACCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000647874.1 |
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| CDS GCA 90 bp | CCCACCGCCCCAGTTGCAAAGTCTCTCCCAAAGTGGTTCAGCAGCTaGTTATGGCTCTCTCCTTGTGTCCCCACAATGGTCAGTGAGATG | + |
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Preference number: 5 (lower is better) Translates to: PTAPVAKSLPKWFSS*LWLSPCVPTMVSEM Trigger: CATCTCACTGACCATTGTGGGGACACAAGGAGAGAGCCATAAGCAGCTGCTGAACCACTTTGGGAGAGACTTTGCAACTGGGGCGGTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000647874.1 |
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| CDS GCA 90 bp | GGAAGTGGTAGATACGGCCGTTGGGGGCACAGATCTGCACATAGTTaGAGTACCAAGGGTCCTTGGGGAAGAAGGCGTACCGCTCTTTGT | + |
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Preference number: 5 (lower is better) Translates to: GSGRYGRWGHRSAHS*STKGPWGRRRTALC Trigger: ACAAAGAGCGGTACGCCTTCTTCCCCAAGGACCCTTGGTACTGCAACTATGTGCAGATCTGTGCCCCCAACGGCCGTATCTACCACTTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000647874.1 |
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| CDS CCA 90 bp | GCCCCAGTTGCAAAGTCTCTCCCAAAGTGGTTCAGCAGCTGCTTATaGCTCTCTCCTTGTGTCCCCACAATGGTCAGTGAGATGGAGTCC | + |
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Preference number: 5 (lower is better) Translates to: APVAKSLPKWFSSCL*LSPCVPTMVSEMES Trigger: GGACTCCATCTCACTGACCATTGTGGGGACACAAGGAGAGAGCCATAAGCAGCTGCTGAACCACTTTGGGAGAGACTTTGCAACTGGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000647874.1 |
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| CDS GCA 90 bp | TATTTCCTGCACCCAAGACTGCAATTCCGGATCACCCTCCACGGCTaGGTCACTCGGGTAATAATAGGTGATGATCTCCGTCACATACTT | + |
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Preference number: 5 (lower is better) Translates to: YFLHPRLQFRITLHG*VTRVIIGDDLRHIL Trigger: AAGTATGTGACGGAGATCATCACCTATTATTACCCGAGTGACGCAGCCGTGGAGGGTGATCCGGAATTGCAGTCTTGGGTGCAGGAAATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000647874.1 ENST00000649809.1 |
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| CDS GCA 72 bp | GAAGGTGTCCTCTGCCCAGTGCTCGGCCACGTACTCTaGGAGGACGGCGCGAGGGCGTCACAAGGAGGCCCG | + |
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Preference number: 6 (lower is better) Translates to: EGVLCPVLGHVL*EDGARASQGGP Trigger: CGGGCCTCCTTGTGACGCCCTCGCGCCGTCCTCGCAGAGTACGTGGCCGAGCACTGGGCAGAGGACACCTTC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000583276.5 ENST00000584116.1 |
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| CDS CCA 72 bp | CGCTGGCGGATGTCGTGTGAGATCTGGTTCAGGCGCTaGCGGAACGCCTCTATGCTCCTCCGCGGGGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: RWRMSCEIWFRR*RNASMLLRGAS Trigger: GGAGGCCCCGCGGAGGAGCATAGAGGCGTTCCGCCAGCGCCTGAACCAGATCTCACACGACATCCGCCAGCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000647874.1 ENST00000649809.1 ENST00000650441.1 |
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| CDS TCA 72 bp | TTCCCTCGCCCAGGAACGGAGCCACCATGTCGTCTGTaGCGGGGAACTTGTCTGGGATCCGCGTGCAGCGGC | + |
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Preference number: 6 (lower is better) Translates to: FPRPGTEPPCRL*RGTCLGSACSG Trigger: GCCGCTGCACGCGGATCCCAGACAAGTTCCCCGTCACAGACGACATGGTGGCTCCGTTCCTGGGCGAGGGAA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000583276.5 ENST00000584116.1 ENST00000647874.1 ENST00000649809.1 |
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| CDS CAA 72 bp | GGGGTCTGGCTGAGCTGGATGGCGATGGGCATCATCTaGCCCTCGGGTCCAAAGTGCAGCAGGCAGAGGGGG | + |
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Preference number: 6 (lower is better) Translates to: GVWLSWMAMGII*PSGPKCSRQRG Trigger: CCCCCTCTGCCTGCTGCACTTTGGACCCGAGGGCAAGATGATGCCCATCGCCATCCAGCTCAGCCAGACCCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000583276.5 ENST00000647874.1 |
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| CDS GCA 72 bp | CCGGAATATAGCCATTCCACTCAGGCCGGTTGGGGTTaGGATGCCTCCGCACCGGAGGGCGGTAACTGGGAA | + |
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Preference number: 6 (lower is better) Translates to: PEYSHSTQAGWG*DASAPEGGNWE Trigger: TTCCCAGTTACCGCCCTCCGGTGCGGAGGCATCGCAACCCCAACCGGCCTGAGTGGAATGGCTATATTCCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647874.1 |
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| CDS CCA 72 bp | TGGGGTTGCGATGCCTCCGCACCGGAGGGCGGTAACTaGGAATGTGCACATAGCTGGGCAGGCCAGGAAGAA | + |
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Preference number: 6 (lower is better) Translates to: WGCDASAPEGGN*ECAHSWAGQEE Trigger: TTCTTCCTGGCCTGCCCAGCTATGTGCACATTCCCAGTTACCGCCCTCCGGTGCGGAGGCATCGCAACCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647874.1 |
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| CDS TCA 72 bp | GTGTTCCCGACAAGAGGTCGGTGCCTGTGGCCACCCTaGCTTTGTAGGTGGCCATGGCTGCTCTTCAGGAGG | + |
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Preference number: 6 (lower is better) Translates to: VFPTRGRCLWPP*LCRWPWLLFRR Trigger: CCTCCTGAAGAGCAGCCATGGCCACCTACAAAGTCAGGGTGGCCACAGGCACCGACCTCTTGTCGGGAACAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647874.1 |
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| CDS CCA 72 bp | AGGCACTTGTTGCGCTGGCGGATGTCGTGTGAGATCTaGTTCAGGCGCTGGCGGAACGCCTCTATGCTCCTC | + |
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Preference number: 6 (lower is better) Translates to: RHLLRWRMSCEI*FRRWRNASMLL Trigger: GAGGAGCATAGAGGCGTTCCGCCAGCGCCTGAACCAGATCTCACACGACATCCGCCAGCGCAACAAGTGCCT 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000647874.1 ENST00000649809.1 ENST00000650441.1 |
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| CDS TCA 72 bp | TCCACGAATGTTTGCAGTCCAACAGGCCGCGGACTTTaGAAGCCAGTGCCATGGGCCCCAGGCGGACGAAGA | + |
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Preference number: 6 (lower is better) Translates to: STNVCSPTGRGL*KPVPWAPGGRR Trigger: TCTTCGTCCGCCTGGGGCCCATGGCACTGGCTTTCAAAGTCCGCGGCCTGTTGGACTGCAAACATTCGTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647874.1 |
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| CDS TCA 72 bp | GATGGGAAGGCACTTGTTGCGCTGGCGGATGTCGTGTaGGATCTGGTTCAGGCGCTGGCGGAACGCCTCTAT | + |
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Preference number: 6 (lower is better) Translates to: DGKALVALADVV*DLVQALAERLY Trigger: ATAGAGGCGTTCCGCCAGCGCCTGAACCAGATCTCACACGACATCCGCCAGCGCAACAAGTGCCTTCCCATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000647874.1 ENST00000649809.1 ENST00000650441.1 |
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| CDS CCA 72 bp | GGCTCTCTCCTTGTGTCCCCACAATGGTCAGTGAGATaGAGTCCCGTGTTCCCGACAAGAGGTCGGTGCCTG | + |
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Preference number: 6 (lower is better) Translates to: GSLLVSPQWSVR*SPVFPTRGRCL Trigger: CAGGCACCGACCTCTTGTCGGGAACACGGGACTCCATCTCACTGACCATTGTGGGGACACAAGGAGAGAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647874.1 |
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| CDS CAA 72 bp | TTCCACGAATGTTTGCAGTCCAACAGGCCGCGGACTTaGAAAGCCAGTGCCATGGGCCCCAGGCGGACGAAG | + |
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Preference number: 6 (lower is better) Translates to: FHECLQSNRPRT*KASAMGPRRTK Trigger: CTTCGTCCGCCTGGGGCCCATGGCACTGGCTTTCAAAGTCCGCGGCCTGTTGGACTGCAAACATTCGTGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647874.1 |
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| CDS CCA 72 bp | GGTCTCCAGAGTGGTCAGCCCCTTAGTCTGAATCGGTaGATTCCGCATGGACGCTGGGAAGTTGGGCATCCA | + |
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Preference number: 6 (lower is better) Translates to: GLQSGQPLSLNR*IPHGRWEVGHP Trigger: TGGATGCCCAACTTCCCAGCGTCCATGCGGAATCCACCGATTCAGACTAAGGGGCTGACCACTCTGGAGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000577351.5 ENST00000647874.1 ENST00000649809.1 ENST00000650441.1 |
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| CDS CCA 72 bp | CCCCTTAGTCTGAATCGGTGGATTCCGCATGGACGCTaGGAAGTTGGGCATCCAGGCGGTGAACTCCATCTG | + |
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Preference number: 6 (lower is better) Translates to: PLSLNRWIPHGR*EVGHPGGELHL Trigger: CAGATGGAGTTCACCGCCTGGATGCCCAACTTCCCAGCGTCCATGCGGAATCCACCGATTCAGACTAAGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000647874.1 ENST00000649809.1 ENST00000650441.1 |
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| CDS CCA 72 bp | TCTCAATCAGCACCGGGTCCAGGTAGTAGTAGGGGATaGGAAGGCACTTGTTGCGCTGGCGGATGTCGTGTG | + |
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Preference number: 6 (lower is better) Translates to: SQSAPGPGSSRG*EGTCCAGGCRV Trigger: CACACGACATCCGCCAGCGCAACAAGTGCCTTCCCATCCCCTACTACTACCTGGACCCGGTGCTGATTGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000647874.1 ENST00000649809.1 ENST00000650441.1 |
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| CDS TCA 72 bp | CCACAAAGTCATTGGGGAGGTAGAGGCTGTCATAGGTaGGCTCCGACAGAGCCCGTACCATCACCCCAGCAA | + |
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Preference number: 6 (lower is better) Translates to: PQSHWGGRGCHR*APTEPVPSPQQ Trigger: TTGCTGGGGTGATGGTACGGGCTCTGTCGGAGCTCACCTATGACAGCCTCTACCTCCCCAATGACTTTGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000577351.5 ENST00000583276.5 ENST00000647874.1 ENST00000649809.1 |
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| CDS TCA 72 bp | CCATGGGCCCCAGGCGGACGAAGAAGGAGGCCGTCTTaGGGAAGGAGTAGCGGAGATTTAAGTTCAGGAACT | + |
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Preference number: 6 (lower is better) Translates to: PWAPGGRRRRPS*GRSSGDLSSGT Trigger: AGTTCCTGAACTTAAATCTCCGCTACTCCTTCCTCAAGACGGCCTCCTTCTTCGTCCGCCTGGGGCCCATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647874.1 |
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| CDS GCA 72 bp | AGATACGGCCGTTGGGGGCACAGATCTGCACATAGTTaGAGTACCAAGGGTCCTTGGGGAAGAAGGCGTACC | + |
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Preference number: 6 (lower is better) Translates to: RYGRWGHRSAHS*STKGPWGRRRT Trigger: GGTACGCCTTCTTCCCCAAGGACCCTTGGTACTGCAACTATGTGCAGATCTGTGCCCCCAACGGCCGTATCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000647874.1 |
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| CDS CCA 72 bp | CCCCTTAGTCTGAATCGGTGGATTCCGCATGGACGCTaGGAAGTTGGGCATCCAGGCGGTGAACTCCATTTC | + |
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Preference number: 6 (lower is better) Translates to: PLSLNRWIPHGR*EVGHPGGELHF Trigger: GAAATGGAGTTCACCGCCTGGATGCCCAACTTCCCAGCGTCCATGCGGAATCCACCGATTCAGACTAAGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000577351.5 |
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| CDS CCA 72 bp | TGGCCCACCGCCCCAGTTGCAAAGTCTCTCCCAAAGTaGTTCAGCAGCTGCTTATGGCTCTCTCCTTGTGTC | + |
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Preference number: 6 (lower is better) Translates to: WPTAPVAKSLPK*FSSCLWLSPCV Trigger: GACACAAGGAGAGAGCCATAAGCAGCTGCTGAACCACTTTGGGAGAGACTTTGCAACTGGGGCGGTGGGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647874.1 |
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| CDS CCA 72 bp | TCCACTGGTAGGCGGGGAAGTGGTAGATACGGCCGTTaGGGGCACAGATCTGCACATAGTTGCAGTACCAAG | + |
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Preference number: 6 (lower is better) Translates to: STGRRGSGRYGR*GHRSAHSCSTK Trigger: CTTGGTACTGCAACTATGTGCAGATCTGTGCCCCCAACGGCCGTATCTACCACTTCCCCGCCTACCAGTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000647874.1 |
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| CDS TCA 72 bp | TCCATGAAGGTCTCCAGAGTGGTCAGCCCCTTAGTCTaGATCGGTGGATTCCGCATGGACGCTGGGAAGTTG | + |
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Preference number: 6 (lower is better) Translates to: SMKVSRVVSPLV*IGGFRMDAGKL Trigger: CAACTTCCCAGCGTCCATGCGGAATCCACCGATTCAGACTAAGGGGCTGACCACTCTGGAGACCTTCATGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000577351.5 ENST00000647874.1 ENST00000649809.1 ENST00000650441.1 |
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| CDS TCA 72 bp | CTTATGGCTCTCTCCTTGTGTCCCCACAATGGTCAGTaGGATGGAGTCCCGTGTTCCCGACAAGAGGTCGGT | + |
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Preference number: 6 (lower is better) Translates to: LMALSLCPHNGQ*DGVPCSRQEVG Trigger: ACCGACCTCTTGTCGGGAACACGGGACTCCATCTCACTGACCATTGTGGGGACACAAGGAGAGAGCCATAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647874.1 |
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| CDS GCA 72 bp | AGGTACTGGTACCCAAAGAAGGTGTCCTCTGCCCAGTaGTCGGCCACGTACTCGGAGACGACAGATTTCTTG | + |
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Preference number: 6 (lower is better) Translates to: RYWYPKKVSSAQ*SATYSETTDFL Trigger: CAAGAAATCTGTCGTCTCCGAGTACGTGGCCGAGCACTGGGCAGAGGACACCTTCTTTGGGTACCAGTACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647874.1 |
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| CDS CCA 72 bp | GCAGCTGCTTATGGCTCTCTCCTTGTGTCCCCACAATaGTCAGTGAGATGGAGTCCCGTGTTCCCGACAAGA | + |
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Preference number: 6 (lower is better) Translates to: AAAYGSLLVSPQ*SVRWSPVFPTR Trigger: TCTTGTCGGGAACACGGGACTCCATCTCACTGACCATTGTGGGGACACAAGGAGAGAGCCATAAGCAGCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647874.1 |
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| CDS CCA 72 bp | CACAGATCTGCACATAGTTGCAGTACCAAGGGTCCTTaGGGAAGAAGGCGTACCGCTCTTTGTGCAGGCGGA | + |
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Preference number: 6 (lower is better) Translates to: HRSAHSCSTKGP*GRRRTALCAGG Trigger: TCCGCCTGCACAAAGAGCGGTACGCCTTCTTCCCCAAGGACCCTTGGTACTGCAACTATGTGCAGATCTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647874.1 |
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| CDS GCA 72 bp | CACCCAAGACTGCAATTCCGGATCACCCTCCACGGCTaGGTCACTCGGGTAATAATAGGTGATGATCTCCGT | + |
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Preference number: 6 (lower is better) Translates to: HPRLQFRITLHG*VTRVIIGDDLR Trigger: ACGGAGATCATCACCTATTATTACCCGAGTGACGCAGCCGTGGAGGGTGATCCGGAATTGCAGTCTTGGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000647874.1 ENST00000649809.1 |
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| CDS GCA 72 bp | CCAGTTGCAAAGTCTCTCCCAAAGTGGTTCAGCAGCTaGTTATGGCTCTCTCCTTGTGTCCCCACAATGGTC | + |
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Preference number: 6 (lower is better) Translates to: PVAKSLPKWFSS*LWLSPCVPTMV Trigger: GACCATTGTGGGGACACAAGGAGAGAGCCATAAGCAGCTGCTGAACCACTTTGGGAGAGACTTTGCAACTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647874.1 |
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| CDS CCA 72 bp | GCAAAGTCTCTCCCAAAGTGGTTCAGCAGCTGCTTATaGCTCTCTCCTTGTGTCCCCACAATGGTCAGTGAG | + |
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Preference number: 6 (lower is better) Translates to: AKSLPKWFSSCL*LSPCVPTMVSE Trigger: CTCACTGACCATTGTGGGGACACAAGGAGAGAGCCATAAGCAGCTGCTGAACCACTTTGGGAGAGACTTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647874.1 |
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| CDS CAA 90 bp | CCAGGGAAAATTTTCCTAATGTCCTTCAGCCTCTTCCACGAATGTTaGCAGTCCAACAGGCCGCGGACTTTGAAAGCCAGTGCCATGGGC | + |
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Preference number: 6 (lower is better) Translates to: PGKIFLMSFSLFHEC*QSNRPRTLKASAMG Trigger: GCCCATGGCACTGGCTTTCAAAGTCCGCGGCCTGTTGGACTGCAAACATTCGTGGAAGAGGCTGAAGGACATTAGGAAAATTTTCCCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000647874.1 |
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