Pregenerated sensors for ALKBH7 (Homo sapiens)
Ensembl gene IDs: ENSG00000125652Ensembl transcript IDs: ENST00000245812.8, ENST00000596657.1, ENST00000599849.1
Found 60 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GACCATGTGTCCAGCCAGCCACACCTGGAGCTCCCTATGGGCCAGTaGCATCCTGGGTTCCCCTGCAAATCCCGGCCCCAGCAAGCAGCC | + |
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Preference number: 1 (lower is better) Translates to: DHVSSQPHLELPMGQ*HPGFPCKSRPQQAA Trigger: GGCTGCTTGCTGGGGCCGGGATTTGCAGGGGAACCCAGGATGGCACTGGCCCATAGGGAGCTCCAGGTGTGGCTGGCTGGACACATGGTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000245812.8 |
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| 3UTR CCA 90 bp | GTCCAGCCAGCCACACCTGGAGCTCCCTATGGGCCAGTGCCATCCTaGGTTCCCCTGCAAATCCCGGCCCCAGCAAGCAGCCACTGCAAT | + |
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Preference number: 1 (lower is better) Translates to: VQPATPGAPYGPVPS*VPLQIPAPASSHCN Trigger: ATTGCAGTGGCTGCTTGCTGGGGCCGGGATTTGCAGGGGAACCCAGGATGGCACTGGCCCATAGGGAGCTCCAGGTGTGGCTGGCTGGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000245812.8 |
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| 3UTR CCA 90 bp | GTGACTTTGACCATGTGTCCAGCCAGCCACACCTGGAGCTCCCTATaGGCCAGTGCCATCCTGGGTTCCCCTGCAAATCCCGGCCCCAGC | + |
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Preference number: 1 (lower is better) Translates to: VTLTMCPASHTWSSL*ASAILGSPANPGPS Trigger: GCTGGGGCCGGGATTTGCAGGGGAACCCAGGATGGCACTGGCCCATAGGGAGCTCCAGGTGTGGCTGGCTGGACACATGGTCAAAGTCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000245812.8 |
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| 3UTR GCA 90 bp | CCACACCTGGAGCTCCCTATGGGCCAGTGCCATCCTGGGTTCCCCTaGAAATCCCGGCCCCAGCAAGCAGCCACTGCAATGTCCCAGTTA | + |
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Preference number: 1 (lower is better) Translates to: PHLELPMGQCHPGFP*KSRPQQAATAMSQL Trigger: TAACTGGGACATTGCAGTGGCTGCTTGCTGGGGCCGGGATTTGCAGGGGAACCCAGGATGGCACTGGCCCATAGGGAGCTCCAGGTGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000245812.8 |
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| 3UTR CCA 90 bp | TCTCCCGGCCTTGTGACTTTGACCATGTGTCCAGCCAGCCACACCTaGAGCTCCCTATGGGCCAGTGCCATCCTGGGTTCCCCTGCAAAT | + |
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Preference number: 1 (lower is better) Translates to: SPGLVTLTMCPASHT*SSLWASAILGSPAN Trigger: ATTTGCAGGGGAACCCAGGATGGCACTGGCCCATAGGGAGCTCCAGGTGTGGCTGGCTGGACACATGGTCAAAGTCACAAGGCCGGGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000245812.8 |
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| 3UTR GCA 90 bp | CAGAGACAACGAGGAGGGGAGTGGGCTGGGGCGACCAGCAGTGAGTaGAATAAAGGACACCACTCTCCCGGCCTTGTGACTTTGACCATG | + |
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Preference number: 1 (lower is better) Translates to: QRQRGGEWAGATSSE*NKGHHSPGLVTLTM Trigger: CATGGTCAAAGTCACAAGGCCGGGAGAGTGGTGTCCTTTATTGCACTCACTGCTGGTCGCCCCAGCCCACTCCCCTCCTCGTTGTCTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000245812.8 |
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| 3UTR CCA 90 bp | ACTTATTTATTGGAGACCTGGATGCAGAGACAACGAGGAGGGGAGTaGGCTGGGGCGACCAGCAGTGAGTGCAATAAAGGACACCACTCT | + |
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Preference number: 1 (lower is better) Translates to: TYLLETWMQRQRGGE*AGATSSECNKGHHS Trigger: AGAGTGGTGTCCTTTATTGCACTCACTGCTGGTCGCCCCAGCCCACTCCCCTCCTCGTTGTCTCTGCATCCAGGTCTCCAATAAATAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000245812.8 |
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| 3UTR-3UTR GCA 90 bp | GACAACGAGGAGGGGAGTGGGCTGGGGCGACCAGCAGTGAGTGCAATAAAGGACCTCCCTATGGGCCAGTaGCATCCTGGGTTCCCCTGC | + |
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Preference number: 2 (lower is better) Translates to: DNEEGSGLGRPAVSAIKDLPMGQ*HPGFPC Trigger: GCAGGGGAACCCAGGATGGCACTGGCCCATAGGGAG...GTCCTTTATTGCACTCACTGCTGGTCGCCCCAGCCCACTCCCCTCCTCGTTGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000245812.8 |
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| 3UTR CAA 90 bp | AGCAGTGAGTGCAATAAAGGACACCACTCTCCCGGCCTTGTGACTTaGACCATGTGTCCAGCCAGCCACACCTGGAGCTCCCTATGGGCC | + |
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Preference number: 2 (lower is better) Translates to: SSECNKGHHSPGLVT*TMCPASHTWSSLWA Trigger: GGCCCATAGGGAGCTCCAGGTGTGGCTGGCTGGACACATGGTCAAAGTCACAAGGCCGGGAGAGTGGTGTCCTTTATTGCACTCACTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000245812.8 |
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| 3UTR-3UTR CCA 90 bp | ACTTATTTATTGGAGACCTGGATGCAGAGACAACGAGGAGGGGAGTGGGCTGGGACCTGGAGCTCCCTATaGGCCAGTGCCATCCTGGGT | + |
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Preference number: 2 (lower is better) Translates to: TYLLETWMQRQRGGEWAGTWSSL*ASAILG Trigger: ACCCAGGATGGCACTGGCCCATAGGGAGCTCCAGGT...CCCAGCCCACTCCCCTCCTCGTTGTCTCTGCATCCAGGTCTCCAATAAATAAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000245812.8 |
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| 3UTR GCA 72 bp | TCCAGCCAGCCACACCTGGAGCTCCCTATGGGCCAGTaGCATCCTGGGTTCCCCTGCAAATCCCGGCCCCAG | + |
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Preference number: 3 (lower is better) Translates to: SSQPHLELPMGQ*HPGFPCKSRPQ Trigger: CTGGGGCCGGGATTTGCAGGGGAACCCAGGATGGCACTGGCCCATAGGGAGCTCCAGGTGTGGCTGGCTGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000245812.8 |
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| 3UTR CCA 72 bp | GCCACACCTGGAGCTCCCTATGGGCCAGTGCCATCCTaGGTTCCCCTGCAAATCCCGGCCCCAGCAAGCAGC | + |
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Preference number: 3 (lower is better) Translates to: ATPGAPYGPVPS*VPLQIPAPASS Trigger: GCTGCTTGCTGGGGCCGGGATTTGCAGGGGAACCCAGGATGGCACTGGCCCATAGGGAGCTCCAGGTGTGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000245812.8 |
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| 3UTR GCA 72 bp | GAGCTCCCTATGGGCCAGTGCCATCCTGGGTTCCCCTaGAAATCCCGGCCCCAGCAAGCAGCCACTGCAATG | + |
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Preference number: 3 (lower is better) Translates to: ELPMGQCHPGFP*KSRPQQAATAM Trigger: CATTGCAGTGGCTGCTTGCTGGGGCCGGGATTTGCAGGGGAACCCAGGATGGCACTGGCCCATAGGGAGCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000245812.8 |
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| 3UTR GCA 72 bp | CGAGGAGGGGAGTGGGCTGGGGCGACCAGCAGTGAGTaGAATAAAGGACACCACTCTCCCGGCCTTGTGACT | + |
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Preference number: 3 (lower is better) Translates to: RGGEWAGATSSE*NKGHHSPGLVT Trigger: AGTCACAAGGCCGGGAGAGTGGTGTCCTTTATTGCACTCACTGCTGGTCGCCCCAGCCCACTCCCCTCCTCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000245812.8 |
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| 3UTR CCA 72 bp | ACCATGTGTCCAGCCAGCCACACCTGGAGCTCCCTATaGGCCAGTGCCATCCTGGGTTCCCCTGCAAATCCC | + |
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Preference number: 3 (lower is better) Translates to: TMCPASHTWSSL*ASAILGSPANP Trigger: GGGATTTGCAGGGGAACCCAGGATGGCACTGGCCCATAGGGAGCTCCAGGTGTGGCTGGCTGGACACATGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000245812.8 |
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| 3UTR-3UTR CAA 90 bp | AGACAACGAGGAGGGGAGTGGGCTGGGGCGACCAGCAGTGAGTGCAATAAAGGACCCGGCCTTGTGACTTaGACCATGTGTCCAGCCAGC | + |
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Preference number: 3 (lower is better) Translates to: RQRGGEWAGATSSECNKGPGLVT*TMCPAS Trigger: GCTGGCTGGACACATGGTCAAAGTCACAAGGCCGGG...TCCTTTATTGCACTCACTGCTGGTCGCCCCAGCCCACTCCCCTCCTCGTTGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000245812.8 |
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| CDS-3UTR CCA 90 bp | GCTCCCTATGGGCCAGTGCCATCCTGGGTTCCCCTGCAAATCCCGGCCCCAGCACACCCAGCTGGGCCCTaGCAGCGTCCGCAGCGCCAG | + |
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Preference number: 4 (lower is better) Translates to: APYGPVPSWVPLQIPAPAHPAGP*QRPQRQ Trigger: CTGGCGCTGCGGACGCTGCCAGGGCCCAGCTGGGTG...TGCTGGGGCCGGGATTTGCAGGGGAACCCAGGATGGCACTGGCCCATAGGGAGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000245812.8 |
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| CDS-3UTR CCA 90 bp | GGGCCAGTGCCATCCTGGGTTCCCCTGCAAATCCCGGCCCCAGCAAGCAGCCACAGCCTCGCACCCAGCTaGGCCCTGGCAGCGTCCGCA | + |
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Preference number: 4 (lower is better) Translates to: GPVPSWVPLQIPAPASSHSLAPS*ALAASA Trigger: TGCGGACGCTGCCAGGGCCCAGCTGGGTGCGAGGCT...GTGGCTGCTTGCTGGGGCCGGGATTTGCAGGGGAACCCAGGATGGCACTGGCCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000245812.8 |
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| CDS-3UTR CCA 90 bp | ACCTGGATGCAGAGACAACGAGGAGGGGAGTGGGCTGGGGCGACCAGCAGTGAGGAGGAGAGCAGGGTCTaGCCGGGGCCAAAGGCGGCC | + |
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Preference number: 4 (lower is better) Translates to: TWMQRQRGGEWAGATSSEEESRV*PGPKAA Trigger: GGCCGCCTTTGGCCCCGGCCAGACCCTGCTCTCCTC...CTCACTGCTGGTCGCCCCAGCCCACTCCCCTCCTCGTTGTCTCTGCATCCAGGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000245812.8 |
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| CDS-3UTR GCA 90 bp | CTGCAAATCCCGGCCCCAGCAAGCAGCCACTGCAATGTCCCAGTTAGGCTGTCCGCCGCCTGCACGCGCTaGAGGATGGCCCGGCTGGCT | + |
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Preference number: 4 (lower is better) Translates to: LQIPAPASSHCNVPVRLSAACTR*RMARLA Trigger: AGCCAGCCGGGCCATCCTGCAGCGCGTGCAGGCGGC...GGACAGCCTAACTGGGACATTGCAGTGGCTGCTTGCTGGGGCCGGGATTTGCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000245812.8 |
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| CDS-3UTR GCA 90 bp | ACCTGGATGCAGAGACAACGAGGAGGGGAGTGGGCTGGGGCGACCAGCAGTGAGGGCAGATCACGGAGATaGGCCGGCCCCGGGGAATCC | + |
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Preference number: 4 (lower is better) Translates to: TWMQRQRGGEWAGATSSEGRSRR*AGPGES Trigger: GGATTCCCCGGGGCCGGCGCATCTCCGTGATCTGCC...CTCACTGCTGGTCGCCCCAGCCCACTCCCCTCCTCGTTGTCTCTGCATCCAGGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000245812.8 |
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| CDS-3UTR GCA 90 bp | CCATCCTGGGTTCCCCTGCAAATCCCGGCCCCAGCAAGCAGCCACTGCAATGTCACCACGGCCGCGTCCTaGAGGCGGCTCAGCACGGAA | + |
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Preference number: 4 (lower is better) Translates to: PSWVPLQIPAPASSHCNVTTAAS*RRLSTE Trigger: TTCCGTGCTGAGCCGCCTGCAGGACGCGGCCGTGGT...GACATTGCAGTGGCTGCTTGCTGGGGCCGGGATTTGCAGGGGAACCCAGGATGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000245812.8 |
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| CDS-3UTR GCA 90 bp | TCCAGCCAGCCACACCTGGAGCTCCCTATGGGCCAGTGCCATCCTGGGTTCCCCTCTCCTCCTCTGCCGTaGTCAGGAAGCCAGGCCGCA | + |
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Preference number: 4 (lower is better) Translates to: SSQPHLELPMGQCHPGFPSPPLP*SGSQAA Trigger: TGCGGCCTGGCTTCCTGAGCACGGCAGAGGAGGAGA...GGGGAACCCAGGATGGCACTGGCCCATAGGGAGCTCCAGGTGTGGCTGGCTGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000245812.8 |
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| CDS-3UTR GCA 90 bp | GCTCCCTATGGGCCAGTGCCATCCTGGGTTCCCCTGCAAATCCCGGCCCCAGCATCCAGGTCCAGCACGTaGACGGAGGAGAGCAGGGTC | + |
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Preference number: 4 (lower is better) Translates to: APYGPVPSWVPLQIPAPASRSST*TEESRV Trigger: GACCCTGCTCTCCTCCGTGCACGTGCTGGACCTGGA...TGCTGGGGCCGGGATTTGCAGGGGAACCCAGGATGGCACTGGCCCATAGGGAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000245812.8 |
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| CDS-3UTR CCA 90 bp | CCATCCTGGGTTCCCCTGCAAATCCCGGCCCCAGCAAGCAGCCACTGCAATGTCTGGGGGTCAGCAGGCTaGGGGCGGCTGTCCAGACTC | + |
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Preference number: 4 (lower is better) Translates to: PSWVPLQIPAPASSHCNVWGSAG*GRLSRL Trigger: GAGTCTGGACAGCCGCCCCCAGCCTGCTGACCCCCA...GACATTGCAGTGGCTGCTTGCTGGGGCCGGGATTTGCAGGGGAACCCAGGATGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000245812.8 |
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| CDS-3UTR TCA 90 bp | CCACACCTGGAGCTCCCTATGGGCCAGTGCCATCCTGGGTTCCCCTGCAAATCCGGCCCGGCTGGCTTCTaGCCAGCGCGACTTCTCTGT | + |
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Preference number: 4 (lower is better) Translates to: PHLELPMGQCHPGFPCKSGPAGF*PARLLC Trigger: ACAGAGAAGTCGCGCTGGTCAGAAGCCAGCCGGGCC...GGATTTGCAGGGGAACCCAGGATGGCACTGGCCCATAGGGAGCTCCAGGTGTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000245812.8 |
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| CDS-3UTR GCA 90 bp | CCTGGATGCAGAGACAACGAGGAGGGGAGTGGGCTGGGGCGACCAGCAGTGAGTCAGCGTCTCCTCCTCTaGCGTGCTCAGGAAGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: PGCRDNEEGSGLGRPAVSQRLLL*RAQEAR Trigger: CCTGGCTTCCTGAGCACGGCAGAGGAGGAGACGCTG...ACTCACTGCTGGTCGCCCCAGCCCACTCCCCTCCTCGTTGTCTCTGCATCCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000245812.8 |
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| CDS-3UTR TCA 90 bp | CATCCTGGGTTCCCCTGCAAATCCCGGCCCCAGCAAGCAGCCACTGCAATGTCCTGTCCACGTGGGGCTTaGTGTAGCCGCGGGCTTCCA | + |
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Preference number: 4 (lower is better) Translates to: HPGFPCKSRPQQAATAMSCPRGA*CSRGLP Trigger: TGGAAGCCCGCGGCTACATCAAGCCCCACGTGGACA...GGACATTGCAGTGGCTGCTTGCTGGGGCCGGGATTTGCAGGGGAACCCAGGATG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000245812.8 |
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| CDS-3UTR GCA 90 bp | GAGTGGGCTGGGGCGACCAGCAGTGAGTGCAATAAAGGACACCACTCTCCCGGCCTCCCTATGGGCCAGTaGCATCCTGGGTTCCCCTGC | + |
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Preference number: 4 (lower is better) Translates to: EWAGATSSECNKGHHSPGLPMGQ*HPGFPC Trigger: GCAGGGGAACCCAGGATGGCACTGGCCCATAGGGAG...GCCGGGAGAGTGGTGTCCTTTATTGCACTCACTGCTGGTCGCCCCAGCCCACTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000245812.8 |
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| CDS-3UTR CCA 90 bp | TGCCATCCTGGGTTCCCCTGCAAATCCCGGCCCCAGCAAGCAGCCACTGCAATGGGGCCAGTGCCATCCTaGGTTCCCCTGCAAATCCCG | + |
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Preference number: 4 (lower is better) Translates to: CHPGFPCKSRPQQAATAMGPVPS*VPLQIP Trigger: CGGGATTTGCAGGGGAACCCAGGATGGCACTGGCCC...CATTGCAGTGGCTGCTTGCTGGGGCCGGGATTTGCAGGGGAACCCAGGATGGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000245812.8 |
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| CDS-3UTR CCA 90 bp | ACCTGGAGCTCCCTATGGGCCAGTGCCATCCTGGGTTCCCCTGCAAATCCCGGCACCTGGAGCTCCCTATaGGCCAGTGCCATCCTGGGT | + |
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Preference number: 4 (lower is better) Translates to: TWSSLWASAILGSPANPGTWSSL*ASAILG Trigger: ACCCAGGATGGCACTGGCCCATAGGGAGCTCCAGGT...GCCGGGATTTGCAGGGGAACCCAGGATGGCACTGGCCCATAGGGAGCTCCAGGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000245812.8 |
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| CDS-3UTR GCA 90 bp | GAGTGGGCTGGGGCGACCAGCAGTGAGTGCAATAAAGGACACCACTCTCCCGGCCATCCTGGGTTCCCCTaGAAATCCCGGCCCCAGCAA | + |
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Preference number: 4 (lower is better) Translates to: EWAGATSSECNKGHHSPGHPGFP*KSRPQQ Trigger: TTGCTGGGGCCGGGATTTGCAGGGGAACCCAGGATG...GCCGGGAGAGTGGTGTCCTTTATTGCACTCACTGCTGGTCGCCCCAGCCCACTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000245812.8 |
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| CDS-3UTR CCA 90 bp | AGAGACAACGAGGAGGGGAGTGGGCTGGGGCGACCAGCAGTGAGTGCAATAAAGGCAGGATGGCCCGGCTaGCTTCTGACCAGCGCGACT | + |
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Preference number: 4 (lower is better) Translates to: RDNEEGSGLGRPAVSAIKAGWPG*LLTSAT Trigger: AGTCGCGCTGGTCAGAAGCCAGCCGGGCCATCCTGC...CTTTATTGCACTCACTGCTGGTCGCCCCAGCCCACTCCCCTCCTCGTTGTCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000245812.8 |
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| CDS-3UTR CCA 90 bp | AGAGACAACGAGGAGGGGAGTGGGCTGGGGCGACCAGCAGTGAGTGCAATAAAGCTGTCCAGACTCCCCTaGCCCCATGCCCTCAGGGAG | + |
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Preference number: 4 (lower is better) Translates to: RDNEEGSGLGRPAVSAIKLSRLP*PHALRE Trigger: CTCCCTGAGGGCATGGGGCCAGGGGAGTCTGGACAG...CTTTATTGCACTCACTGCTGGTCGCCCCAGCCCACTCCCCTCCTCGTTGTCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000245812.8 |
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| CDS-3UTR GCA 90 bp | GACTTATTTATTGGAGACCTGGATGCAGAGACAACGAGGAGGGGAGTGGGCTGGCCAAAGGCGGCCGCCTaGACGCGCTGCAGGATGGCC | + |
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Preference number: 4 (lower is better) Translates to: DLFIGDLDAETTRRGVGWPKAAA*TRCRMA Trigger: GGCCATCCTGCAGCGCGTGCAGGCGGCCGCCTTTGG...CCAGCCCACTCCCCTCCTCGTTGTCTCTGCATCCAGGTCTCCAATAAATAAGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000245812.8 |
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| CDS-3UTR GCA 90 bp | AAATCCCGGCCCCAGCAAGCAGCCACTGCAATGTCCCAGTTAGGCTGTCCATTCCCCGGCTCCTGGGTGTaGACCAGCCGCATAACGCTG | + |
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Preference number: 4 (lower is better) Translates to: KSRPQQAATAMSQLGCPFPGSWV*TSRITL Trigger: CAGCGTTATGCGGCTGGTGCACACCCAGGAGCCGGG...GAATGGACAGCCTAACTGGGACATTGCAGTGGCTGCTTGCTGGGGCCGGGATTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000245812.8 |
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| CDS-3UTR GCA 90 bp | CATGTGTCCAGCCAGCCACACCTGGAGCTCCCTATGGGCCAGTGCCATCCTGGGCCAGCAAGCAGCCACTaGAATGTCCCAGTTAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: HVSSQPHLELPMGQCHPGPASSH*NVPVRL Trigger: CAGCCTAACTGGGACATTGCAGTGGCTGCTTGCTGG...CCCAGGATGGCACTGGCCCATAGGGAGCTCCAGGTGTGGCTGGCTGGACACATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000245812.8 |
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| CDS-3UTR TCA 90 bp | CCTGGGTTCCCCTGCAAATCCCGGCCCCAGCAAGCAGCCACTGCAATGTCCCAGGAAGTCATAACGGGCTaGGCCCCTAAGGATGTAGAG | + |
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Preference number: 4 (lower is better) Translates to: PGFPCKSRPQQAATAMSQEVITG*APKDVE Trigger: CTCTACATCCTTAGGGGCTCAGCCCGTTATGACTTC...CTGGGACATTGCAGTGGCTGCTTGCTGGGGCCGGGATTTGCAGGGGAACCCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000245812.8 |
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| CDS-3UTR CCA 90 bp | GCGACCAGCAGTGAGTGCAATAAAGGACACCACTCTCCCGGCCTTGTGACTTTGCACTCCCCCGGCTCCTaGGTGTGCACCAGCCGCATA | + |
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Preference number: 4 (lower is better) Translates to: ATSSECNKGHHSPGLVTLHSPGS*VCTSRI Trigger: TATGCGGCTGGTGCACACCCAGGAGCCGGGGGAGTG...CAAAGTCACAAGGCCGGGAGAGTGGTGTCCTTTATTGCACTCACTGCTGGTCGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000245812.8 |
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| CDS-3UTR GCA 90 bp | CACCTGGAGCTCCCTATGGGCCAGTGCCATCCTGGGTTCCCCTGCAAATCCCGGGCGACCAGCAGTGAGTaGAATAAAGGACACCACTCT | + |
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Preference number: 4 (lower is better) Translates to: HLELPMGQCHPGFPCKSRATSSE*NKGHHS Trigger: AGAGTGGTGTCCTTTATTGCACTCACTGCTGGTCGC...CCGGGATTTGCAGGGGAACCCAGGATGGCACTGGCCCATAGGGAGCTCCAGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000245812.8 |
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| CDS-3UTR CCA 90 bp | CCAGCAAGCAGCCACTGCAATGTCCCAGTTAGGCTGTCCATTCCCCAACTTTATCAACGAGGAGGGGAGTaGGCTGGGGCGACCAGCAGT | + |
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Preference number: 4 (lower is better) Translates to: PASSHCNVPVRLSIPQLYQRGGE*AGATSS Trigger: ACTGCTGGTCGCCCCAGCCCACTCCCCTCCTCGTTG...ATAAAGTTGGGGAATGGACAGCCTAACTGGGACATTGCAGTGGCTGCTTGCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000245812.8 |
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| CDS-3UTR CCA 90 bp | AGCAGTGAGTGCAATAAAGGACACCACTCTCCCGGCCTTGTGACTTTGACCATGCCAGCCAGCCACACCTaGAGCTCCCTATGGGCCAGT | + |
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Preference number: 4 (lower is better) Translates to: SSECNKGHHSPGLVTLTMPASHT*SSLWAS Trigger: ACTGGCCCATAGGGAGCTCCAGGTGTGGCTGGCTGG...CATGGTCAAAGTCACAAGGCCGGGAGAGTGGTGTCCTTTATTGCACTCACTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000245812.8 |
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| CDS-3UTR CCA 90 bp | CCCCAGCAAGCAGCCACTGCAATGTCCCAGTTAGGCTGTCCATTCCCCAACTTTTATTTATTGGAGACCTaGATGCAGAGACAACGAGGA | + |
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Preference number: 4 (lower is better) Translates to: PQQAATAMSQLGCPFPNFYLLET*MQRQRG Trigger: TCCTCGTTGTCTCTGCATCCAGGTCTCCAATAAATA...AAAGTTGGGGAATGGACAGCCTAACTGGGACATTGCAGTGGCTGCTTGCTGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000245812.8 |
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| CDS GCA 90 bp | TCCTCTGCCGTGCTCAGGAAGCCAGGCCGCACCACGGCCGCGTCCTaGAGGCGGCTCAGCACGGAAGGGCCCGAGCCTCGCACCCAGCTG | + |
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Preference number: 5 (lower is better) Translates to: SSAVLRKPGRTTAAS*RRLSTEGPEPRTQL Trigger: CAGCTGGGTGCGAGGCTCGGGCCCTTCCGTGCTGAGCCGCCTGCAGGACGCGGCCGTGGTGCGGCCTGGCTTCCTGAGCACGGCAGAGGA 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000245812.8 |
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| CDS GCA 90 bp | TGCACGGAGGAGAGCAGGGTCTGGCCGGGGCCAAAGGCGGCCGCCTaGACGCGCTGCAGGATGGCCCGGCTGGCTTCTGACCAGCGCGAC | + |
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Preference number: 5 (lower is better) Translates to: CTEESRVWPGPKAAA*TRCRMARLASDQRD Trigger: GTCGCGCTGGTCAGAAGCCAGCCGGGCCATCCTGCAGCGCGTGCAGGCGGCCGCCTTTGGCCCCGGCCAGACCCTGCTCTCCTCCGTGCA 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000245812.8 ENST00000596657.1 ENST00000599849.1 |
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| CDS GCA 90 bp | GCAGCTCGGGCTCCAGTTCTCGGCTCAGCGTCTCCTCCTCTGCCGTaGTCAGGAAGCCAGGCCGCACCACGGCCGCGTCCTGCAGGCGGC | + |
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Preference number: 5 (lower is better) Translates to: AARAPVLGSASPPLP*SGSQAAPRPRPAGG Trigger: GCCGCCTGCAGGACGCGGCCGTGGTGCGGCCTGGCTTCCTGAGCACGGCAGAGGAGGAGACGCTGAGCCGAGAACTGGAGCCCGAGCTGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000245812.8 |
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| CDS GCA 90 bp | GCGGCGCAGCTCGGGCTCCAGTTCTCGGCTCAGCGTCTCCTCCTCTaGCGTGCTCAGGAAGCCAGGCCGCACCACGGCCGCGTCCTGCAG | + |
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Preference number: 5 (lower is better) Translates to: AAQLGLQFSAQRLLL*RAQEARPHHGRVLQ Trigger: CTGCAGGACGCGGCCGTGGTGCGGCCTGGCTTCCTGAGCACGGCAGAGGAGGAGACGCTGAGCCGAGAACTGGAGCCCGAGCTGCGCCGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000245812.8 |
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| CDS CCA 90 bp | CGGGGCCAAAGGCGGCCGCCTGCACGCGCTGCAGGATGGCCCGGCTaGCTTCTGACCAGCGCGACTTCTCTGTCTCTCGGAAGCCGTGGA | + |
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Preference number: 5 (lower is better) Translates to: RGQRRPPARAAGWPG*LLTSATSLSLGSRG Trigger: TCCACGGCTTCCGAGAGACAGAGAAGTCGCGCTGGTCAGAAGCCAGCCGGGCCATCCTGCAGCGCGTGCAGGCGGCCGCCTTTGGCCCCG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000245812.8 ENST00000596657.1 ENST00000599849.1 |
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| CDS TCA 90 bp | AAAGGCGGCCGCCTGCACGCGCTGCAGGATGGCCCGGCTGGCTTCTaGCCAGCGCGACTTCTCTGTCTCTCGGAAGCCGTGGATGGCCGC | + |
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Preference number: 5 (lower is better) Translates to: KGGRLHALQDGPAGF*PARLLCLSEAVDGR Trigger: GCGGCCATCCACGGCTTCCGAGAGACAGAGAAGTCGCGCTGGTCAGAAGCCAGCCGGGCCATCCTGCAGCGCGTGCAGGCGGCCGCCTTT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000245812.8 |
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| CDS TCA 90 bp | AAAGGCGGCCGCCTGCACGCGCTGCAGGATGGCCCGGCTGGCTTCTaGCCAGCGCGACTTCTCTGTCTCTCGGAAGCCGTGGATGGCCCC | + |
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Preference number: 5 (lower is better) Translates to: KGGRLHALQDGPAGF*PARLLCLSEAVDGP Trigger: GGGGCCATCCACGGCTTCCGAGAGACAGAGAAGTCGCGCTGGTCAGAAGCCAGCCGGGCCATCCTGCAGCGCGTGCAGGCGGCCGCCTTT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000599849.1 |
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| CDS GCA 90 bp | CCCGGCTCCAGCAAGAGTTCCAGCCACTCCCCCGGCTCCTGGGTGTaGACCAGCCGCATAACGCTGGGAGACAGGAGAGACAGGCCGGCG | + |
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Preference number: 5 (lower is better) Translates to: PGSSKSSSHSPGSWV*TSRITLGDRRDRPA Trigger: CGCCGGCCTGTCTCTCCTGTCTCCCAGCGTTATGCGGCTGGTGCACACCCAGGAGCCGGGGGAGTGGCTGGAACTCTTGCTGGAGCCGGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000245812.8 ENST00000596657.1 ENST00000599849.1 |
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| CDS TCA 90 bp | AAAGGCGGCCGCCTGCACGCGCTGCAGGATGGCCCGGCTGGCTTCTaGCCAGCGCGACTTCTCTGTCTCTCGGAAGCCGTGGATGGCCTG | + |
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Preference number: 5 (lower is better) Translates to: KGGRLHALQDGPAGF*PARLLCLSEAVDGL Trigger: CAGGCCATCCACGGCTTCCGAGAGACAGAGAAGTCGCGCTGGTCAGAAGCCAGCCGGGCCATCCTGCAGCGCGTGCAGGCGGCCGCCTTT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000596657.1 |
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| CDS-3UTR CAA 90 bp | CCAGCCAGCCACACCTGGAGCTCCCTATGGGCCAGTGCCATCCTGGGTTCCCCTGTGGCCCCGCAGAACTaGATGCTGTCCACGTGGGGC | + |
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Preference number: 5 (lower is better) Translates to: PASHTWSSLWASAILGSPVAPQN*MLSTWG Trigger: GCCCCACGTGGACAGCATCAAGTTCTGCGGGGCCAC...AGGGGAACCCAGGATGGCACTGGCCCATAGGGAGCTCCAGGTGTGGCTGGCTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000245812.8 |
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| CDS GCA 90 bp | CGTGGATGGCCTGACCACGCCCCAATCCCAGCCGCCACGTTCTTCTaGACTGTAACTGCTAGCAGCGTAATCGCACCCCAACCCTACACC | + |
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Preference number: 5 (lower is better) Translates to: RGWPDHAPIPAATFF*TVTASSVIAPQPYT Trigger: GGTGTAGGGTTGGGGTGCGATTACGCTGCTAGCAGTTACAGTGCAGAAGAACGTGGCGGCTGGGATTGGGGCGTGGTCAGGCCATCCACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000596657.1 |
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| CDS-3UTR CAA 90 bp | CCTGGATGCAGAGACAACGAGGAGGGGAGTGGGCTGGGGCGACCAGCAGTGAGTCGGCTGACTTATTTATaGGAGACCTGGATGCAGAGA | + |
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Preference number: 5 (lower is better) Translates to: PGCRDNEEGSGLGRPAVSRLTYL*ETWMQR Trigger: TCTCTGCATCCAGGTCTCCAATAAATAAGTCAGCCG...ACTCACTGCTGGTCGCCCCAGCCCACTCCCCTCCTCGTTGTCTCTGCATCCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000245812.8 |
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| CDS-3UTR CAA 90 bp | AATGTCCCAGTTAGGCTGTCCATTCCCCAACTTTATTCACAAATCTGGTGTCTGCCCGGCCTTGTGACTTaGACCATGTGTCCAGCCAGC | + |
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Preference number: 5 (lower is better) Translates to: NVPVRLSIPQLYSQIWCLPGLVT*TMCPAS Trigger: GCTGGCTGGACACATGGTCAAAGTCACAAGGCCGGG...CAGACACCAGATTTGTGAATAAAGTTGGGGAATGGACAGCCTAACTGGGACATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000245812.8 |
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| CDS CCA 72 bp | AGGCGGCCGCCTGCACGCGCTGCAGGATGGCCCGGCTaGCTTCTGACCAGCGCGACTTCTCTGTCTCTCGGA | + |
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Preference number: 6 (lower is better) Translates to: RRPPARAAGWPG*LLTSATSLSLG Trigger: TCCGAGAGACAGAGAAGTCGCGCTGGTCAGAAGCCAGCCGGGCCATCCTGCAGCGCGTGCAGGCGGCCGCCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000245812.8 ENST00000596657.1 ENST00000599849.1 |
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| CDS TCA 72 bp | CGCCTGCACGCGCTGCAGGATGGCCCGGCTGGCTTCTaGCCAGCGCGACTTCTCTGTCTCTCGGAAGCCGTG | + |
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Preference number: 6 (lower is better) Translates to: RLHALQDGPAGF*PARLLCLSEAV Trigger: CACGGCTTCCGAGAGACAGAGAAGTCGCGCTGGTCAGAAGCCAGCCGGGCCATCCTGCAGCGCGTGCAGGCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000245812.8 ENST00000596657.1 ENST00000599849.1 |
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| CDS GCA 72 bp | AGCAAGAGTTCCAGCCACTCCCCCGGCTCCTGGGTGTaGACCAGCCGCATAACGCTGGGAGACAGGAGAGAC | + |
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Preference number: 6 (lower is better) Translates to: SKSSSHSPGSWV*TSRITLGDRRD Trigger: GTCTCTCCTGTCTCCCAGCGTTATGCGGCTGGTGCACACCCAGGAGCCGGGGGAGTGGCTGGAACTCTTGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000245812.8 ENST00000596657.1 ENST00000599849.1 |
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| CDS GCA 72 bp | CCTGACCACGCCCCAATCCCAGCCGCCACGTTCTTCTaGACTGTAACTGCTAGCAGCGTAATCGCACCCCAA | + |
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Preference number: 6 (lower is better) Translates to: PDHAPIPAATFF*TVTASSVIAPQ Trigger: TTGGGGTGCGATTACGCTGCTAGCAGTTACAGTGCAGAAGAACGTGGCGGCTGGGATTGGGGCGTGGTCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000596657.1 |
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