RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ALKBH6 (Homo sapiens)

Ensembl gene IDs: ENSG00000239382

Ensembl transcript IDs: ENST00000252984.11, ENST00000378875.7, ENST00000392183.7, ENST00000461668.5, ENST00000462793.5, ENST00000466196.5, ENST00000468004.5, ENST00000470859.1, ENST00000471323.1, ENST00000475223.5, ENST00000481257.5, ENST00000485128.5, ENST00000486389.5, ENST00000490483.5, ENST00000490986.5, ENST00000495116.6, ENST00000497999.1, ENST00000590666.5, ENST00000592353.1

Found 359 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGTGCCGCGCACCAGGCAGGCTCCCGGCCGCGCCGACGGGCAGGCTaGCGCATTGGGCGGCGAGGAGGCGGCGTCCAGCGCGTCTACGCG +
Preference number: 1 (lower is better)
Translates to: GAAHQAGSRPRRRAG*RIGRRGGGVQRVYA
Trigger: CGCGTAGACGCGCTGGACGCCGCCTCCTCGCCGCCCAATGCGGCAGCCTGCCCGTCGGCGCGGCCGGGAGCCTGCCTGGTGCGCGGCACC
80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
ENST00000497999.1
3UTR CCA 90 bp TGCCCAGCAGGAGGCCGGCGCGCAGCACGCGGGGCACGCGGCGGATaGTCAGCGAGACCCGGGTGCCGCGCACCAGGCAGGCTCCCGGCC +
Preference number: 1 (lower is better)
Translates to: CPAGGRRAARGARGG*SARPGCRAPGRLPA
Trigger: GGCCGGGAGCCTGCCTGGTGCGCGGCACCCGGGTCTCGCTGACCATCCGCCGCGTGCCCCGCGTGCTGCGCGCCGGCCTCCTGCTGGGCA
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
ENST00000497999.1
3UTR GCA 90 bp GCGGCGAGGAGGCGGCGTCCAGCGCGTCTACGCGGGCGGCGGCGATaGCGTGGAGAAGACGCGTGTAGGCGGGGCCGCGGAGCACCAGCA +
Preference number: 1 (lower is better)
Translates to: AARRRRPARLRGRRR*RGEDACRRGRGAPA
Trigger: TGCTGGTGCTCCGCGGCCCCGCCTACACGCGTCTTCTCCACGGCATCGCCGCCGCCCGCGTAGACGCGCTGGACGCCGCCTCCTCGCCGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
ENST00000497999.1
3UTR GCA 90 bp GGCAGGAACCTGGGAATCCGAGGGGTCCCGGCCCTGGCGGTCACTTaGCCAGCAGGAGGCCGGCGCGCAGCACGCGGGGCACGCGGCGGA +
Preference number: 1 (lower is better)
Translates to: GRNLGIRGVPALAVT*PAGGRRAARGARGG
Trigger: TCCGCCGCGTGCCCCGCGTGCTGCGCGCCGGCCTCCTGCTGGGCAAGTGACCGCCAGGGCCGGGACCCCTCGGATTCCCAGGTTCCTGCC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
3UTR GCA 90 bp CGTGGAGAAGACGCGTGTAGGCGGGGCCGCGGAGCACCAGCAGGCTaGGCGGTTCCAGCAGTAGCGAGGTGGTGGGCCGGGGCGGAGGCC +
Preference number: 1 (lower is better)
Translates to: RGEDACRRGRGAPAG*AVPAVARWWAGAEA
Trigger: GGCCTCCGCCCCGGCCCACCACCTCGCTACTGCTGGAACCGCGCAGCCTGCTGGTGCTCCGCGGCCCCGCCTACACGCGTCTTCTCCACG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
ENST00000497999.1
3UTR CCA 90 bp GGGCCGGGGCGGAGGCCGAGGCTGTTCTGTAGGGTCATCGTCCTCTaGCCGCCGCGGCTCGTAGAAGTCCAGCACGGTGTGGGAGCCCAG +
Preference number: 1 (lower is better)
Translates to: GPGRRPRLFCRVIVL*PPRLVEVQHGVGAQ
Trigger: CTGGGCTCCCACACCGTGCTGGACTTCTACGAGCCGCGGCGGCCAGAGGACGATGACCCTACAGAACAGCCTCGGCCTCCGCCCCGGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461668.5
ENST00000490483.5
ENST00000490986.5
ENST00000497999.1
3UTR TCA 90 bp CACGAGGACATGGTTAGCTGGGAGGCCTCCAAAGAGGCTGAGGTTTaGCACTTTGTCCACGTAGCGCTGGAGCCATGGGGGCAGCCGCTC +
Preference number: 1 (lower is better)
Translates to: HEDMVSWEASKEAEV*HFVHVALEPWGQPL
Trigger: GAGCGGCTGCCCCCATGGCTCCAGCGCTACGTGGACAAAGTGTCAAACCTCAGCCTCTTTGGAGGCCTCCCAGCTAACCATGTCCTCGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481257.5
3UTR CCA 90 bp AATGCCATGATGCCCTCCCCAGGCAGATACTGGTTCACGAGGACATaGTTAGCTGGGAGGCCTCCAAAGAGGCTGAGGTTTGACACTTTG +
Preference number: 1 (lower is better)
Translates to: NAMMPSPGRYWFTRT*LAGRPPKRLRFDTL
Trigger: CAAAGTGTCAAACCTCAGCCTCTTTGGAGGCCTCCCAGCTAACCATGTCCTCGTGAACCAGTATCTGCCTGGGGAGGGCATCATGGCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481257.5
3UTR CAA 90 bp GGGCAGGAACCTGGGAATCCGAGGGGTCCCGGCCCTGGCGGTCACTaGCCCAGCAGGAGGCCGGCGCGCAGCACGCGGGGCACGCGGCGG +
Preference number: 2 (lower is better)
Translates to: GQEPGNPRGPGPGGH*PSRRPARSTRGTRR
Trigger: CCGCCGCGTGCCCCGCGTGCTGCGCGCCGGCCTCCTGCTGGGCAAGTGACCGCCAGGGCCGGGACCCCTCGGATTCCCAGGTTCCTGCCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
3UTR-3UTR GCA 90 bp GCAGGAGGCCGGCGCGCAGCACGCGGGGCACGCGGCGGATGGTCAGCGAGACCCCAGGGGAGCCCCCTTTaGCCACGGTTCCTAGGTCGC +
Preference number: 2 (lower is better)
Translates to: AGGRRAARGARGGWSARPQGSPL*PRFLGR
Trigger: GCGACCTAGGAACCGTGGGCAAAGGGGGCTCCCCTG...GGGTCTCGCTGACCATCCGCCGCGTGCCCCGCGTGCTGCGCGCCGGCCTCCTGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
3UTR-3UTR GCA 90 bp AGGAGGCCGGCGCGCAGCACGCGGGGCACGCGGCGGATGGTCAGCGAGACCCGGGGAGCACCAGCAGGCTaGGCGGTTCCAGCAGTAGCG +
Preference number: 2 (lower is better)
Translates to: RRPARSTRGTRRMVSETRGAPAG*AVPAVA
Trigger: CGCTACTGCTGGAACCGCGCAGCCTGCTGGTGCTCC...CCGGGTCTCGCTGACCATCCGCCGCGTGCCCCGCGTGCTGCGCGCCGGCCTCCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
ENST00000497999.1
3UTR-3UTR GCA 90 bp CGGGCAGGCTGCCGCATTGGGCGGCGAGGAGGCGGCGTCCAGCGCGTCTACGCGCAGGGGAGCCCCCTTTaGCCACGGTTCCTAGGTCGC +
Preference number: 2 (lower is better)
Translates to: RAGCRIGRRGGGVQRVYAQGSPL*PRFLGR
Trigger: GCGACCTAGGAACCGTGGGCAAAGGGGGCTCCCCTG...CGCGTAGACGCGCTGGACGCCGCCTCCTCGCCGCCCAATGCGGCAGCCTGCCCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
3UTR-3UTR GCA 90 bp CTGGGAATCCGAGGGGTCCCGGCCCTGGCGGTCACTTGCCCAGCAGGAGGCCGGTCAGCGAGACCCGGGTaGCGCGCACCAGGCAGGCTC +
Preference number: 2 (lower is better)
Translates to: LGIRGVPALAVTCPAGGRSARPG*RAPGRL
Trigger: GAGCCTGCCTGGTGCGCGGCACCCGGGTCTCGCTGA...CCGGCCTCCTGCTGGGCAAGTGACCGCCAGGGCCGGGACCCCTCGGATTCCCAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
3UTR-3UTR GCA 90 bp AATCCGAGGGGTCCCGGCCCTGGCGGTCACTTGCCCAGCAGGAGGCCGGCGCGCCAGGGGAGCCCCCTTTaGCCACGGTTCCTAGGTCGC +
Preference number: 2 (lower is better)
Translates to: NPRGPGPGGHLPSRRPARQGSPL*PRFLGR
Trigger: GCGACCTAGGAACCGTGGGCAAAGGGGGCTCCCCTG...GCGCGCCGGCCTCCTGCTGGGCAAGTGACCGCCAGGGCCGGGACCCCTCGGATT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
3UTR-3UTR CCA 90 bp GCATTGGGCGGCGAGGAGGCGGCGTCCAGCGCGTCTACGCGGGCGGCGGCGATGAGGGTCATCGTCCTCTaGCCGCCGCGGCTCGTAGAA +
Preference number: 2 (lower is better)
Translates to: ALGGEEAASSASTRAAAMRVIVL*PPRLVE
Trigger: TTCTACGAGCCGCGGCGGCCAGAGGACGATGACCCT...CATCGCCGCCGCCCGCGTAGACGCGCTGGACGCCGCCTCCTCGCCGCCCAATGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461668.5
ENST00000490483.5
ENST00000490986.5
ENST00000497999.1
3UTR-3UTR CCA 90 bp CAGCAGGAGGCCGGCGCGCAGCACGCGGGGCACGCGGCGGATGGTCAGCGAGACAGGGTCATCGTCCTCTaGCCGCCGCGGCTCGTAGAA +
Preference number: 2 (lower is better)
Translates to: QQEAGAQHAGHAADGQRDRVIVL*PPRLVE
Trigger: TTCTACGAGCCGCGGCGGCCAGAGGACGATGACCCT...GTCTCGCTGACCATCCGCCGCGTGCCCCGCGTGCTGCGCGCCGGCCTCCTGCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461668.5
ENST00000490483.5
ENST00000490986.5
ENST00000497999.1
3UTR-3UTR GCA 90 bp GCGGGGCCGCGGAGCACCAGCAGGCTGCGCGGTTCCAGCAGTAGCGAGGTGGTGCAGGGGAGCCCCCTTTaGCCACGGTTCCTAGGTCGC +
Preference number: 2 (lower is better)
Translates to: AGPRSTSRLRGSSSSEVVQGSPL*PRFLGR
Trigger: GCGACCTAGGAACCGTGGGCAAAGGGGGCTCCCCTG...CACCACCTCGCTACTGCTGGAACCGCGCAGCCTGCTGGTGCTCCGCGGCCCCGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
3UTR-3UTR GCA 90 bp CTGGGAATCCGAGGGGTCCCGGCCCTGGCGGTCACTTGCCCAGCAGGAGGCCGGGGAGCACCAGCAGGCTaGGCGGTTCCAGCAGTAGCG +
Preference number: 2 (lower is better)
Translates to: LGIRGVPALAVTCPAGGRGAPAG*AVPAVA
Trigger: CGCTACTGCTGGAACCGCGCAGCCTGCTGGTGCTCC...CCGGCCTCCTGCTGGGCAAGTGACCGCCAGGGCCGGGACCCCTCGGATTCCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
3UTR-3UTR CCA 90 bp CACGCGGCGGATGGTCAGCGAGACCCGGGTGCCGCGCACCAGGCAGGCTCCCGGAAGTCCAGCACGGTGTaGGAGCCCAGGCTGATGGTG +
Preference number: 2 (lower is better)
Translates to: HAADGQRDPGAAHQAGSRKSSTV*EPRLMV
Trigger: CACCATCAGCCTGGGCTCCCACACCGTGCTGGACTT...CCGGGAGCCTGCCTGGTGCGCGGCACCCGGGTCTCGCTGACCATCCGCCGCGTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461668.5
ENST00000490483.5
ENST00000490986.5
ENST00000497999.1
3UTR-3UTR CCA 90 bp GGGCGGCGGCGATGCCGTGGAGAAGACGCGTGTAGGCGGGGCCGCGGAGCACCAAGGGTCATCGTCCTCTaGCCGCCGCGGCTCGTAGAA +
Preference number: 2 (lower is better)
Translates to: GRRRCRGEDACRRGRGAPRVIVL*PPRLVE
Trigger: TTCTACGAGCCGCGGCGGCCAGAGGACGATGACCCT...TGGTGCTCCGCGGCCCCGCCTACACGCGTCTTCTCCACGGCATCGCCGCCGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461668.5
ENST00000490483.5
ENST00000490986.5
ENST00000497999.1
3UTR-3UTR CCA 90 bp AAAGGGGCAGGAACCTGGGAATCCGAGGGGTCCCGGCCCTGGCGGTCACTTGCCGGCAGGCTGCCGCATTaGGCGGCGAGGAGGCGGCGT +
Preference number: 2 (lower is better)
Translates to: KGAGTWESEGSRPWRSLAGRLPH*AARRRR
Trigger: ACGCCGCCTCCTCGCCGCCCAATGCGGCAGCCTGCC...GGCAAGTGACCGCCAGGGCCGGGACCCCTCGGATTCCCAGGTTCCTGCCCCTTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
3UTR-3UTR CCA 90 bp GGCGGATGGTCAGCGAGACCCGGGTGCCGCGCACCAGGCAGGCTCCCGGCCGCGAGTCGGGTAGTACAGTaGTCCGTCCTCGTGGGGCAT +
Preference number: 2 (lower is better)
Translates to: GGWSARPGCRAPGRLPAASRVVQ*SVLVGH
Trigger: ATGCCCCACGAGGACGGACCACTGTACTACCCGACT...CGCGGCCGGGAGCCTGCCTGGTGCGCGGCACCCGGGTCTCGCTGACCATCCGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000490483.5
ENST00000490986.5
ENST00000497999.1
3UTR-3UTR TCA 90 bp GGCGGAGGCCGAGGCTGTTCTGTAGGGTCATCGTCCTCTGGCCGCCGCGGCTCGCGTCCTCGTGGGGCATaGTGCCCTCCCCAGGCAGAT +
Preference number: 2 (lower is better)
Translates to: GGGRGCSVGSSSSGRRGSRPRGA*CPPQAD
Trigger: ATCTGCCTGGGGAGGGCATCATGCCCCACGAGGACG...CGAGCCGCGGCGGCCAGAGGACGATGACCCTACAGAACAGCCTCGGCCTCCGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000490483.5
ENST00000490986.5
ENST00000497999.1
3UTR-3UTR CCA 90 bp CGCGGGCGGCGGCGATGCCGTGGAGAAGACGCGTGTAGGCGGGGCCGCGGAGCATGGTTCACGAGGACATaGTTAGCTGGGAGGCCTCCA +
Preference number: 2 (lower is better)
Translates to: RGRRRCRGEDACRRGRGAWFTRT*LAGRPP
Trigger: TGGAGGCCTCCCAGCTAACCATGTCCTCGTGAACCA...TGCTCCGCGGCCCCGCCTACACGCGTCTTCTCCACGGCATCGCCGCCGCCCGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497999.1
3UTR-3UTR TCA 90 bp CAGCACGCGGGGCACGCGGCGGATGGTCAGCGAGACCCGGGTGCCGCGCACCAGGGCCTCCAAAGAGGCTaGGGTTTGACACTTTGTCCA +
Preference number: 2 (lower is better)
Translates to: QHAGHAADGQRDPGAAHQGLQRG*GLTLCP
Trigger: TGGACAAAGTGTCAAACCTCAGCCTCTTTGGAGGCC...CTGGTGCGCGGCACCCGGGTCTCGCTGACCATCCGCCGCGTGCCCCGCGTGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497999.1
3UTR-3UTR CCA 90 bp CCGCGGAGCACCAGCAGGCTGCGCGGTTCCAGCAGTAGCGAGGTGGTGGGCCGGAGTCGGGTAGTACAGTaGTCCGTCCTCGTGGGGCAT +
Preference number: 2 (lower is better)
Translates to: PRSTSRLRGSSSSEVVGRSRVVQ*SVLVGH
Trigger: ATGCCCCACGAGGACGGACCACTGTACTACCCGACT...CCGGCCCACCACCTCGCTACTGCTGGAACCGCGCAGCCTGCTGGTGCTCCGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000490483.5
ENST00000490986.5
ENST00000497999.1
3UTR-3UTR CCA 90 bp GGAGCACCAGCAGGCTGCGCGGTTCCAGCAGTAGCGAGGTGGTGGGCCGGGGCGAGTCGGGTAGTACAGTaGTCCGTCCTCGTGGGGCAT +
Preference number: 2 (lower is better)
Translates to: GAPAGCAVPAVARWWAGASRVVQ*SVLVGH
Trigger: ATGCCCCACGAGGACGGACCACTGTACTACCCGACT...CGCCCCGGCCCACCACCTCGCTACTGCTGGAACCGCGCAGCCTGCTGGTGCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000490483.5
ENST00000490986.5
ENST00000497999.1
3UTR-3UTR GCA 90 bp AGCCCCCTTTGCCCACGGTTCCTAGGTCGCGGAGTCACAGCAGCCCCAAAGGGGCAGGGGAGCCCCCTTTaGCCACGGTTCCTAGGTCGC +
Preference number: 2 (lower is better)
Translates to: SPLCPRFLGRGVTAAPKGQGSPL*PRFLGR
Trigger: GCGACCTAGGAACCGTGGGCAAAGGGGGCTCCCCTG...CCCCTTTGGGGCTGCTGTGACTCCGCGACCTAGGAACCGTGGGCAAAGGGGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 6 transcripts:
ENST00000378875.7
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
3UTR-3UTR CCA 90 bp CCGACGGGCAGGCTGCCGCATTGGGCGGCGAGGAGGCGGCGTCCAGCGCGTCTATTTCTCCCAGAGAGCTaGGTCCACTTTGGCTTTGGG +
Preference number: 2 (lower is better)
Translates to: PTGRLPHWAARRRRPARLFLPES*VHFGFG
Trigger: CCCAAAGCCAAAGTGGACCCAGCTCTCTGGGAGAAA...TAGACGCGCTGGACGCCGCCTCCTCGCCGCCCAATGCGGCAGCCTGCCCGTCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461668.5
3UTR-3UTR CCA 90 bp AGGCGGGGCCGCGGAGCACCAGCAGGCTGCGCGGTTCCAGCAGTAGCGAGGTGGGAGGACATGGTTAGCTaGGAGGCCTCCAAAGAGGCT +
Preference number: 2 (lower is better)
Translates to: RRGRGAPAGCAVPAVARWEDMVS*EASKEA
Trigger: AGCCTCTTTGGAGGCCTCCCAGCTAACCATGTCCTC...CCACCTCGCTACTGCTGGAACCGCGCAGCCTGCTGGTGCTCCGCGGCCCCGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497999.1
3UTR-3UTR CCA 90 bp CGCGGGCGGCGGCGATGCCGTGGAGAAGACGCGTGTAGGCGGGGCCGCGGAGCAGAGCTGGGTCCACTTTaGCTTTGGGGCATTAAAAAC +
Preference number: 2 (lower is better)
Translates to: RGRRRCRGEDACRRGRGAELGPL*LWGIKN
Trigger: GTTTTTAATGCCCCAAAGCCAAAGTGGACCCAGCTC...TGCTCCGCGGCCCCGCCTACACGCGTCTTCTCCACGGCATCGCCGCCGCCCGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000461668.5
3UTR-3UTR TCA 90 bp ATAACCCAGGGGAGCCCCCTTTGCCCACGGTTCCTAGGTCGCGGAGTCACAGCACGTCCTCGTGGGGCATaGTGCCCTCCCCAGGCAGAT +
Preference number: 2 (lower is better)
Translates to: ITQGSPLCPRFLGRGVTARPRGA*CPPQAD
Trigger: ATCTGCCTGGGGAGGGCATCATGCCCCACGAGGACG...TGCTGTGACTCCGCGACCTAGGAACCGTGGGCAAAGGGGGCTCCCCTGGGTTAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000490483.5
ENST00000490986.5
3UTR-3UTR CCA 90 bp GCGCTGGAGCCATGGGGGCAGCCGCTCAGGAACCATCCCTCGGGGATGAGGAAGGAGCTGGGTCCACTTTaGCTTTGGGGCATTAAAAAC +
Preference number: 2 (lower is better)
Translates to: ALEPWGQPLRNHPSGMRKELGPL*LWGIKN
Trigger: GTTTTTAATGCCCCAAAGCCAAAGTGGACCCAGCTC...CTTCCTCATCCCCGAGGGATGGTTCCTGAGCGGCTGCCCCCATGGCTCCAGCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000481257.5
3UTR-3UTR CCA 90 bp GGGCAGCCGCTCAGGAACCATCCCTCGGGGATGAGGAAGCCCACCCCAGTTCTGGGTCCACTTTGGCTTTaGGGCATTAAAAACCTGTCG +
Preference number: 2 (lower is better)
Translates to: GQPLRNHPSGMRKPTPVLGPLWL*GIKNLS
Trigger: CGACAGGTTTTTAATGCCCCAAAGCCAAAGTGGACC...CAGAACTGGGGTGGGCTTCCTCATCCCCGAGGGATGGTTCCTGAGCGGCTGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000481257.5
3UTR CCA 72 bp AGGCTCCCGGCCGCGCCGACGGGCAGGCTGCCGCATTaGGCGGCGAGGAGGCGGCGTCCAGCGCGTCTACGC +
Preference number: 3 (lower is better)
Translates to: RLPAAPTGRLPH*AARRRRPARLR
Trigger: GCGTAGACGCGCTGGACGCCGCCTCCTCGCCGCCCAATGCGGCAGCCTGCCCGTCGGCGCGGCCGGGAGCCT
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
ENST00000497999.1
3UTR GCA 72 bp AGGCGGCGTCCAGCGCGTCTACGCGGGCGGCGGCGATaGCGTGGAGAAGACGCGTGTAGGCGGGGCCGCGGA +
Preference number: 3 (lower is better)
Translates to: RRRPARLRGRRR*RGEDACRRGRG
Trigger: TCCGCGGCCCCGCCTACACGCGTCTTCTCCACGGCATCGCCGCCGCCCGCGTAGACGCGCTGGACGCCGCCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
ENST00000497999.1
3UTR GCA 72 bp CTGGGAATCCGAGGGGTCCCGGCCCTGGCGGTCACTTaGCCAGCAGGAGGCCGGCGCGCAGCACGCGGGGCA +
Preference number: 3 (lower is better)
Translates to: LGIRGVPALAVT*PAGGRRAARGA
Trigger: TGCCCCGCGTGCTGCGCGCCGGCCTCCTGCTGGGCAAGTGACCGCCAGGGCCGGGACCCCTCGGATTCCCAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
3UTR GCA 72 bp GACGCGTGTAGGCGGGGCCGCGGAGCACCAGCAGGCTaGGCGGTTCCAGCAGTAGCGAGGTGGTGGGCCGGG +
Preference number: 3 (lower is better)
Translates to: DACRRGRGAPAG*AVPAVARWWAG
Trigger: CCCGGCCCACCACCTCGCTACTGCTGGAACCGCGCAGCCTGCTGGTGCTCCGCGGCCCCGCCTACACGCGTC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
ENST00000497999.1
3UTR CCA 72 bp GGGGCAGGAACCTGGGAATCCGAGGGGTCCCGGCCCTaGCGGTCACTTGCCCAGCAGGAGGCCGGCGCGCAG +
Preference number: 3 (lower is better)
Translates to: GAGTWESEGSRP*RSLAQQEAGAQ
Trigger: CTGCGCGCCGGCCTCCTGCTGGGCAAGTGACCGCCAGGGCCGGGACCCCTCGGATTCCCAGGTTCCTGCCCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
3UTR-3UTR CAA 90 bp CGCGGGCGGCGGCGATGCCGTGGAGAAGACGCGTGTAGGCGGGGCCGCGGAGCACCAGGGGAGCCCCCTTaGCCCACGGTTCCTAGGTCG +
Preference number: 3 (lower is better)
Translates to: RGRRRCRGEDACRRGRGAPGEPP*PTVPRS
Trigger: CGACCTAGGAACCGTGGGCAAAGGGGGCTCCCCTGG...TGCTCCGCGGCCCCGCCTACACGCGTCTTCTCCACGGCATCGCCGCCGCCCGCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
3UTR-3UTR CAA 90 bp GGCAGGCTGCCGCATTGGGCGGCGAGGAGGCGGCGTCCAGCGCGTCTACGCGGGCCAGGGGAGCCCCCTTaGCCCACGGTTCCTAGGTCG +
Preference number: 3 (lower is better)
Translates to: GRLPHWAARRRRPARLRGPGEPP*PTVPRS
Trigger: CGACCTAGGAACCGTGGGCAAAGGGGGCTCCCCTGG...CCCGCGTAGACGCGCTGGACGCCGCCTCCTCGCCGCCCAATGCGGCAGCCTGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
3UTR-3UTR CAA 90 bp CCAGCGCGTCTACGCGGGCGGCGGCGATGCCGTGGAGAAGACGCGTGTAGGCGGCCAGGGGAGCCCCCTTaGCCCACGGTTCCTAGGTCG +
Preference number: 3 (lower is better)
Translates to: PARLRGRRRCRGEDACRRPGEPP*PTVPRS
Trigger: CGACCTAGGAACCGTGGGCAAAGGGGGCTCCCCTGG...CCGCCTACACGCGTCTTCTCCACGGCATCGCCGCCGCCCGCGTAGACGCGCTGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
3UTR-3UTR CAA 90 bp TGTAGGCGGGGCCGCGGAGCACCAGCAGGCTGCGCGGTTCCAGCAGTAGCGAGGCCAGGGGAGCCCCCTTaGCCCACGGTTCCTAGGTCG +
Preference number: 3 (lower is better)
Translates to: CRRGRGAPAGCAVPAVARPGEPP*PTVPRS
Trigger: CGACCTAGGAACCGTGGGCAAAGGGGGCTCCCCTGG...CCTCGCTACTGCTGGAACCGCGCAGCCTGCTGGTGCTCCGCGGCCCCGCCTACA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
3UTR-3UTR CAA 90 bp GGAACCTGGGAATCCGAGGGGTCCCGGCCCTGGCGGTCACTTGCCCAGCAGGAGCCAGGGGAGCCCCCTTaGCCCACGGTTCCTAGGTCG +
Preference number: 3 (lower is better)
Translates to: GTWESEGSRPWRSLAQQEPGEPP*PTVPRS
Trigger: CGACCTAGGAACCGTGGGCAAAGGGGGCTCCCCTGG...CTCCTGCTGGGCAAGTGACCGCCAGGGCCGGGACCCCTCGGATTCCCAGGTTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
3UTR CCA 72 bp CGGAGGCCGAGGCTGTTCTGTAGGGTCATCGTCCTCTaGCCGCCGCGGCTCGTAGAAGTCCAGCACGGTGTG +
Preference number: 3 (lower is better)
Translates to: RRPRLFCRVIVL*PPRLVEVQHGV
Trigger: CACACCGTGCTGGACTTCTACGAGCCGCGGCGGCCAGAGGACGATGACCCTACAGAACAGCCTCGGCCTCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461668.5
ENST00000490483.5
ENST00000490986.5
ENST00000497999.1
3UTR CCA 72 bp GCCCAGGCTGATGGTGCTGACAGTCGGGTAGTACAGTaGTCCGTCCTCGTGGGGCATGATGCCCTCCCCAGG +
Preference number: 3 (lower is better)
Translates to: AQADGADSRVVQ*SVLVGHDALPR
Trigger: CCTGGGGAGGGCATCATGCCCCACGAGGACGGACCACTGTACTACCCGACTGTCAGCACCATCAGCCTGGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000490483.5
ENST00000490986.5
ENST00000497999.1
3UTR CCA 72 bp GCCCAGGCTGATGGTGCTGACAGTCGGGTAGTACAGTaGTCCGTCCTCGTGGGGCCCAGTTCTGTAACTTTC +
Preference number: 3 (lower is better)
Translates to: AQADGADSRVVQ*SVLVGPSSVTF
Trigger: GAAAGTTACAGAACTGGGCCCCACGAGGACGGACCACTGTACTACCCGACTGTCAGCACCATCAGCCTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461668.5
3UTR TCA 72 bp ATGGTTAGCTGGGAGGCCTCCAAAGAGGCTGAGGTTTaGCACTTTGTCCACGTAGCGCTGGAGCCATGGGGG +
Preference number: 3 (lower is better)
Translates to: MVSWEASKEAEV*HFVHVALEPWG
Trigger: CCCCCATGGCTCCAGCGCTACGTGGACAAAGTGTCAAACCTCAGCCTCTTTGGAGGCCTCCCAGCTAACCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481257.5
ENST00000497999.1
3UTR CCA 72 bp ATGCCCTCCCCAGGCAGATACTGGTTCACGAGGACATaGTTAGCTGGGAGGCCTCCAAAGAGGCTGAGGTTT +
Preference number: 3 (lower is better)
Translates to: MPSPGRYWFTRT*LAGRPPKRLRF
Trigger: AAACCTCAGCCTCTTTGGAGGCCTCCCAGCTAACCATGTCCTCGTGAACCAGTATCTGCCTGGGGAGGGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481257.5
ENST00000497999.1
3UTR CAA 72 bp CAGGCTCCCGGCCGCGCCGACGGGCAGGCTGCCGCATaGGGCGGCGAGGAGGCGGCGTCCAGCGCGTCTACG +
Preference number: 4 (lower is better)
Translates to: QAPGRADGQAAA*GGEEAASSAST
Trigger: CGTAGACGCGCTGGACGCCGCCTCCTCGCCGCCCAATGCGGCAGCCTGCCCGTCGGCGCGGCCGGGAGCCTG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
ENST00000497999.1
CDS-3UTR GCA 90 bp TTGGGCGGCGAGGAGGCGGCGTCCAGCGCGTCTACGCGGGCGGCGGCGATGCCGGCCCTGGCGGTCACTTaGCCAGCAGGAGGCCGGCGC +
Preference number: 4 (lower is better)
Translates to: LGGEEAASSASTRAAAMPALAVT*PAGGRR
Trigger: GCGCCGGCCTCCTGCTGGGCAAGTGACCGCCAGGGC...CGGCATCGCCGCCGCCCGCGTAGACGCGCTGGACGCCGCCTCCTCGCCGCCCAA
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR CCA 90 bp AGGCCGGCGCGCAGCACGCGGGGCACGCGGCGGATGGTCAGCGAGACCCGGGTGGGCAGGCTGCCGCATTaGGCGGCGAGGAGGCGGCGT +
Preference number: 4 (lower is better)
Translates to: RPARSTRGTRRMVSETRVGRLPH*AARRRR
Trigger: ACGCCGCCTCCTCGCCGCCCAATGCGGCAGCCTGCC...CACCCGGGTCTCGCTGACCATCCGCCGCGTGCCCCGCGTGCTGCGCGCCGGCCT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
ENST00000497999.1
CDS-3UTR CCA 90 bp AGGAGGCCGGCGCGCAGCACGCGGGGCACGCGGCGGATGGTCAGCGAGACCCGGGGCAGGCTGCCGCATTaGGCGGCGAGGAGGCGGCGT +
Preference number: 4 (lower is better)
Translates to: RRPARSTRGTRRMVSETRGRLPH*AARRRR
Trigger: ACGCCGCCTCCTCGCCGCCCAATGCGGCAGCCTGCC...CCGGGTCTCGCTGACCATCCGCCGCGTGCCCCGCGTGCTGCGCGCCGGCCTCCT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
ENST00000497999.1
CDS-3UTR CCA 90 bp CGGCGGATGGTCAGCGAGACCCGGGTGCCGCGCACCAGGCAGGCTCCCGGCCGCGGGGCACGCGGCGGATaGTCAGCGAGACCCGGGTGC +
Preference number: 4 (lower is better)
Translates to: RRMVSETRVPRTRQAPGRGARGG*SARPGC
Trigger: GCACCCGGGTCTCGCTGACCATCCGCCGCGTGCCCC...GCGGCCGGGAGCCTGCCTGGTGCGCGGCACCCGGGTCTCGCTGACCATCCGCCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
ENST00000497999.1
CDS-3UTR GCA 90 bp GTCCCGGCCCTGGCGGTCACTTGCCCAGCAGGAGGCCGGCGCGCAGCACGCGGGCGCGGGCGGCGGCGATaGCGTGGAGAAGACGCGTGT +
Preference number: 4 (lower is better)
Translates to: VPALAVTCPAGGRRAARGRGRRR*RGEDAC
Trigger: ACACGCGTCTTCTCCACGGCATCGCCGCCGCCCGCG...CCCGCGTGCTGCGCGCCGGCCTCCTGCTGGGCAAGTGACCGCCAGGGCCGGGAC
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR CCA 90 bp GGCACGCGGCGGATGGTCAGCGAGACCCGGGTGCCGCGCACCAGGCAGGCTCCCGGCAGGCTGCCGCATTaGGCGGCGAGGAGGCGGCGT +
Preference number: 4 (lower is better)
Translates to: GTRRMVSETRVPRTRQAPGRLPH*AARRRR
Trigger: ACGCCGCCTCCTCGCCGCCCAATGCGGCAGCCTGCC...GGGAGCCTGCCTGGTGCGCGGCACCCGGGTCTCGCTGACCATCCGCCGCGTGCC
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
ENST00000497999.1
CDS-3UTR CCA 90 bp GCAGGCTGCCGCATTGGGCGGCGAGGAGGCGGCGTCCAGCGCGTCTACGCGGGCGGGGCACGCGGCGGATaGTCAGCGAGACCCGGGTGC +
Preference number: 4 (lower is better)
Translates to: AGCRIGRRGGGVQRVYAGGARGG*SARPGC
Trigger: GCACCCGGGTCTCGCTGACCATCCGCCGCGTGCCCC...GCCCGCGTAGACGCGCTGGACGCCGCCTCCTCGCCGCCCAATGCGGCAGCCTGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
ENST00000497999.1
CDS-3UTR CCA 90 bp ATGGTCAGCGAGACCCGGGTGCCGCGCACCAGGCAGGCTCCCGGCCGCGCCGACGGGGCACGCGGCGGATaGTCAGCGAGACCCGGGTGC +
Preference number: 4 (lower is better)
Translates to: MVSETRVPRTRQAPGRADGARGG*SARPGC
Trigger: GCACCCGGGTCTCGCTGACCATCCGCCGCGTGCCCC...GTCGGCGCGGCCGGGAGCCTGCCTGGTGCGCGGCACCCGGGTCTCGCTGACCAT
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
ENST00000497999.1
CDS-3UTR CCA 90 bp CGCGGGGCACGCGGCGGATGGTCAGCGAGACCCGGGTGCCGCGCACCAGGCAGGGAGGGGTCCCGGCCCTaGCGGTCACTTGCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: RGARGGWSARPGCRAPGREGSRP*RSLAQQ
Trigger: CTGCTGGGCAAGTGACCGCCAGGGCCGGGACCCCTC...CCTGCCTGGTGCGCGGCACCCGGGTCTCGCTGACCATCCGCCGCGTGCCCCGCG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR CCA 90 bp CCGCATTGGGCGGCGAGGAGGCGGCGTCCAGCGCGTCTACGCGGGCGGCGGCGAGAGGGGTCCCGGCCCTaGCGGTCACTTGCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: PHWAARRRRPARLRGRRREGSRP*RSLAQQ
Trigger: CTGCTGGGCAAGTGACCGCCAGGGCCGGGACCCCTC...TCGCCGCCGCCCGCGTAGACGCGCTGGACGCCGCCTCCTCGCCGCCCAATGCGG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR GCA 90 bp GATGGTCAGCGAGACCCGGGTGCCGCGCACCAGGCAGGCTCCCGGCCGCGCCGACGCGGGCGGCGGCGATaGCGTGGAGAAGACGCGTGT +
Preference number: 4 (lower is better)
Translates to: DGQRDPGAAHQAGSRPRRRGRRR*RGEDAC
Trigger: ACACGCGTCTTCTCCACGGCATCGCCGCCGCCCGCG...TCGGCGCGGCCGGGAGCCTGCCTGGTGCGCGGCACCCGGGTCTCGCTGACCATC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
ENST00000497999.1
CDS-3UTR GCA 90 bp CGAGGGGTCCCGGCCCTGGCGGTCACTTGCCCAGCAGGAGGCCGGCGCGCAGCATCAGCGAGACCCGGGTaGCGCGCACCAGGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: RGVPALAVTCPAGGRRAASARPG*RAPGRL
Trigger: GAGCCTGCCTGGTGCGCGGCACCCGGGTCTCGCTGA...TGCTGCGCGCCGGCCTCCTGCTGGGCAAGTGACCGCCAGGGCCGGGACCCCTCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR GCA 90 bp ATGGTCAGCGAGACCCGGGTGCCGCGCACCAGGCAGGCTCCCGGCCGCGCCGACTCAGCGAGACCCGGGTaGCGCGCACCAGGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: MVSETRVPRTRQAPGRADSARPG*RAPGRL
Trigger: GAGCCTGCCTGGTGCGCGGCACCCGGGTCTCGCTGA...GTCGGCGCGGCCGGGAGCCTGCCTGGTGCGCGGCACCCGGGTCTCGCTGACCAT
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
ENST00000497999.1
CDS-3UTR GCA 90 bp GGGCACGCGGCGGATGGTCAGCGAGACCCGGGTGCCGCGCACCAGGCAGGCTCCTCAGCGAGACCCGGGTaGCGCGCACCAGGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: GHAADGQRDPGAAHQAGSSARPG*RAPGRL
Trigger: GAGCCTGCCTGGTGCGCGGCACCCGGGTCTCGCTGA...GGAGCCTGCCTGGTGCGCGGCACCCGGGTCTCGCTGACCATCCGCCGCGTGCCC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
ENST00000497999.1
CDS-3UTR CCA 90 bp GCGCGTCTACGCGGGCGGCGGCGATGCCGTGGAGAAGACGCGTGTAGGCGGGGCGGCAGGCTGCCGCATTaGGCGGCGAGGAGGCGGCGT +
Preference number: 4 (lower is better)
Translates to: ARLRGRRRCRGEDACRRGGRLPH*AARRRR
Trigger: ACGCCGCCTCCTCGCCGCCCAATGCGGCAGCCTGCC...GCCCCGCCTACACGCGTCTTCTCCACGGCATCGCCGCCGCCCGCGTAGACGCGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
ENST00000497999.1
CDS-3UTR CCA 90 bp GGGGCACGCGGCGGATGGTCAGCGAGACCCGGGTGCCGCGCACCAGGCAGGCTCGAGGGGTCCCGGCCCTaGCGGTCACTTGCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: GARGGWSARPGCRAPGRLEGSRP*RSLAQQ
Trigger: CTGCTGGGCAAGTGACCGCCAGGGCCGGGACCCCTC...GAGCCTGCCTGGTGCGCGGCACCCGGGTCTCGCTGACCATCCGCCGCGTGCCCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR TCA 90 bp GCAGGAGGCCGGCGCGCAGCACGCGGGGCACGCGGCGGATGGTCAGCGAGACCCCGTCCTCGTGGGGCATaGTGCCCTCCCCAGGCAGAT +
Preference number: 4 (lower is better)
Translates to: AGGRRAARGARGGWSARPRPRGA*CPPQAD
Trigger: ATCTGCCTGGGGAGGGCATCATGCCCCACGAGGACG...GGGTCTCGCTGACCATCCGCCGCGTGCCCCGCGTGCTGCGCGCCGGCCTCCTGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000490483.5
ENST00000490986.5
ENST00000497999.1
CDS-3UTR GCA 90 bp GGCGGATGGTCAGCGAGACCCGGGTGCCGCGCACCAGGCAGGCTCCCGGCCGCGGGAGCACCAGCAGGCTaGGCGGTTCCAGCAGTAGCG +
Preference number: 4 (lower is better)
Translates to: GGWSARPGCRAPGRLPAAGAPAG*AVPAVA
Trigger: CGCTACTGCTGGAACCGCGCAGCCTGCTGGTGCTCC...CGCGGCCGGGAGCCTGCCTGGTGCGCGGCACCCGGGTCTCGCTGACCATCCGCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
ENST00000497999.1
CDS-3UTR GCA 90 bp CTGGGAATCCGAGGGGTCCCGGCCCTGGCGGTCACTTGCCCAGCAGGAGGCCGGGCCCTGGCGGTCACTTaGCCAGCAGGAGGCCGGCGC +
Preference number: 4 (lower is better)
Translates to: LGIRGVPALAVTCPAGGRALAVT*PAGGRR
Trigger: GCGCCGGCCTCCTGCTGGGCAAGTGACCGCCAGGGC...CCGGCCTCCTGCTGGGCAAGTGACCGCCAGGGCCGGGACCCCTCGGATTCCCAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR GCA 90 bp AGGAGGCCGGCGCGCAGCACGCGGGGCACGCGGCGGATGGTCAGCGAGACCCGGCAGGGGAGCCCCCTTTaGCCACGGTTCCTAGGTCGC +
Preference number: 4 (lower is better)
Translates to: RRPARSTRGTRRMVSETRQGSPL*PRFLGR
Trigger: GCGACCTAGGAACCGTGGGCAAAGGGGGCTCCCCTG...CCGGGTCTCGCTGACCATCCGCCGCGTGCCCCGCGTGCTGCGCGCCGGCCTCCT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR CCA 90 bp GAATCCGAGGGGTCCCGGCCCTGGCGGTCACTTGCCCAGCAGGAGGCCGGCGCGGAGGGGTCCCGGCCCTaGCGGTCACTTGCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: ESEGSRPWRSLAQQEAGAEGSRP*RSLAQQ
Trigger: CTGCTGGGCAAGTGACCGCCAGGGCCGGGACCCCTC...CGCGCCGGCCTCCTGCTGGGCAAGTGACCGCCAGGGCCGGGACCCCTCGGATTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR CCA 90 bp GACGGGCAGGCTGCCGCATTGGGCGGCGAGGAGGCGGCGTCCAGCGCGTCTACGGAGGGGTCCCGGCCCTaGCGGTCACTTGCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: DGQAAALGGEEAASSASTEGSRP*RSLAQQ
Trigger: CTGCTGGGCAAGTGACCGCCAGGGCCGGGACCCCTC...CGTAGACGCGCTGGACGCCGCCTCCTCGCCGCCCAATGCGGCAGCCTGCCCGTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR TCA 90 bp AGGAGGCCGGCGCGCAGCACGCGGGGCACGCGGCGGATGGTCAGCGAGACCCGGTGTGGGAGCCCAGGCTaGTGGTGCATGATGCCCTCC +
Preference number: 4 (lower is better)
Translates to: RRPARSTRGTRRMVSETRCGSPG*WCMMPS
Trigger: GGAGGGCATCATGCACCATCAGCCTGGGCTCCCACA...CCGGGTCTCGCTGACCATCCGCCGCGTGCCCCGCGTGCTGCGCGCCGGCCTCCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485128.5
ENST00000486389.5
CDS-3UTR GCA 90 bp ATGGTCAGCGAGACCCGGGTGCCGCGCACCAGGCAGGCTCCCGGCCGCGCCGACGGAGCACCAGCAGGCTaGGCGGTTCCAGCAGTAGCG +
Preference number: 4 (lower is better)
Translates to: MVSETRVPRTRQAPGRADGAPAG*AVPAVA
Trigger: CGCTACTGCTGGAACCGCGCAGCCTGCTGGTGCTCC...GTCGGCGCGGCCGGGAGCCTGCCTGGTGCGCGGCACCCGGGTCTCGCTGACCAT
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
ENST00000497999.1
CDS-3UTR GCA 90 bp GGCGAGGAGGCGGCGTCCAGCGCGTCTACGCGGGCGGCGGCGATGCCGTGGAGAGGAGCACCAGCAGGCTaGGCGGTTCCAGCAGTAGCG +
Preference number: 4 (lower is better)
Translates to: GEEAASSASTRAAAMPWRGAPAG*AVPAVA
Trigger: CGCTACTGCTGGAACCGCGCAGCCTGCTGGTGCTCC...TCTCCACGGCATCGCCGCCGCCCGCGTAGACGCGCTGGACGCCGCCTCCTCGCC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
ENST00000497999.1
CDS-3UTR GCA 90 bp GGCACGCGGCGGATGGTCAGCGAGACCCGGGTGCCGCGCACCAGGCAGGCTCCCGGAGCACCAGCAGGCTaGGCGGTTCCAGCAGTAGCG +
Preference number: 4 (lower is better)
Translates to: GTRRMVSETRVPRTRQAPGAPAG*AVPAVA
Trigger: CGCTACTGCTGGAACCGCGCAGCCTGCTGGTGCTCC...GGGAGCCTGCCTGGTGCGCGGCACCCGGGTCTCGCTGACCATCCGCCGCGTGCC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
ENST00000497999.1
CDS-3UTR GCA 90 bp CGGGCAGGCTGCCGCATTGGGCGGCGAGGAGGCGGCGTCCAGCGCGTCTACGCGGGAGCACCAGCAGGCTaGGCGGTTCCAGCAGTAGCG +
Preference number: 4 (lower is better)
Translates to: RAGCRIGRRGGGVQRVYAGAPAG*AVPAVA
Trigger: CGCTACTGCTGGAACCGCGCAGCCTGCTGGTGCTCC...CGCGTAGACGCGCTGGACGCCGCCTCCTCGCCGCCCAATGCGGCAGCCTGCCCG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
ENST00000497999.1
CDS-3UTR GCA 90 bp TGTAGGCGGGGCCGCGGAGCACCAGCAGGCTGCGCGGTTCCAGCAGTAGCGAGGGCCCTGGCGGTCACTTaGCCAGCAGGAGGCCGGCGC +
Preference number: 4 (lower is better)
Translates to: CRRGRGAPAGCAVPAVARALAVT*PAGGRR
Trigger: GCGCCGGCCTCCTGCTGGGCAAGTGACCGCCAGGGC...CCTCGCTACTGCTGGAACCGCGCAGCCTGCTGGTGCTCCGCGGCCCCGCCTACA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR CCA 90 bp GAAGACGCGTGTAGGCGGGGCCGCGGAGCACCAGCAGGCTGCGCGGTTCCAGCAGGCAGGCTGCCGCATTaGGCGGCGAGGAGGCGGCGT +
Preference number: 4 (lower is better)
Translates to: EDACRRGRGAPAGCAVPAGRLPH*AARRRR
Trigger: ACGCCGCCTCCTCGCCGCCCAATGCGGCAGCCTGCC...TGCTGGAACCGCGCAGCCTGCTGGTGCTCCGCGGCCCCGCCTACACGCGTCTTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
ENST00000497999.1
CDS-3UTR CCA 90 bp GTGGAGAAGACGCGTGTAGGCGGGGCCGCGGAGCACCAGCAGGCTGCGCGGTTCGGGGCACGCGGCGGATaGTCAGCGAGACCCGGGTGC +
Preference number: 4 (lower is better)
Translates to: VEKTRVGGAAEHQQAARFGARGG*SARPGC
Trigger: GCACCCGGGTCTCGCTGACCATCCGCCGCGTGCCCC...GAACCGCGCAGCCTGCTGGTGCTCCGCGGCCCCGCCTACACGCGTCTTCTCCAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
ENST00000497999.1
CDS-3UTR TCA 90 bp ATTGGGCGGCGAGGAGGCGGCGTCCAGCGCGTCTACGCGGGCGGCGGCGATGCCAGCACTCCCCAAAACTaGCCGTCCACCAGCGTCCCC +
Preference number: 4 (lower is better)
Translates to: IGRRGGGVQRVYAGGGDASTPQN*PSTSVP
Trigger: GGGGACGCTGGTGGACGGTCAGTTTTGGGGAGTGCT...GGCATCGCCGCCGCCCGCGTAGACGCGCTGGACGCCGCCTCCTCGCCGCCCAAT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486389.5
CDS-3UTR GCA 90 bp CGTGGAGAAGACGCGTGTAGGCGGGGCCGCGGAGCACCAGCAGGCTGCGCGGTTCGCGGGCGGCGGCGATaGCGTGGAGAAGACGCGTGT +
Preference number: 4 (lower is better)
Translates to: RGEDACRRGRGAPAGCAVRGRRR*RGEDAC
Trigger: ACACGCGTCTTCTCCACGGCATCGCCGCCGCCCGCG...AACCGCGCAGCCTGCTGGTGCTCCGCGGCCCCGCCTACACGCGTCTTCTCCACG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
ENST00000497999.1
CDS-3UTR GCA 90 bp GTGGAGAAGACGCGTGTAGGCGGGGCCGCGGAGCACCAGCAGGCTGCGCGGTTCCGCGGGCGGCGGCGATaGCGTGGAGAAGACGCGTGT +
Preference number: 4 (lower is better)
Translates to: VEKTRVGGAAEHQQAARFRGRRR*RGEDAC
Trigger: ACACGCGTCTTCTCCACGGCATCGCCGCCGCCCGCG...GAACCGCGCAGCCTGCTGGTGCTCCGCGGCCCCGCCTACACGCGTCTTCTCCAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
ENST00000497999.1
CDS-3UTR GCA 90 bp GAATCCGAGGGGTCCCGGCCCTGGCGGTCACTTGCCCAGCAGGAGGCCGGCGCGCAGGGGAGCCCCCTTTaGCCACGGTTCCTAGGTCGC +
Preference number: 4 (lower is better)
Translates to: ESEGSRPWRSLAQQEAGAQGSPL*PRFLGR
Trigger: GCGACCTAGGAACCGTGGGCAAAGGGGGCTCCCCTG...CGCGCCGGCCTCCTGCTGGGCAAGTGACCGCCAGGGCCGGGACCCCTCGGATTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR GCA 90 bp TTGGGCGGCGAGGAGGCGGCGTCCAGCGCGTCTACGCGGGCGGCGGCGATGCCGAGCCCCTACGTTCCATaGCCGGACACAATGAGCCCC +
Preference number: 4 (lower is better)
Translates to: LGGEEAASSASTRAAAMPSPYVP*PDTMSP
Trigger: GGGGCTCATTGTGTCCGGGCATGGAACGTAGGGGCT...CGGCATCGCCGCCGCCCGCGTAGACGCGCTGGACGCCGCCTCCTCGCCGCCCAA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486389.5
CDS-3UTR CCA 90 bp GAGGCGGCGTCCAGCGCGTCTACGCGGGCGGCGGCGATGCCGTGGAGAAGACGCGTAGCGCTGGAGCCATaGGGGCAGCCGCTCAGGAAC +
Preference number: 4 (lower is better)
Translates to: EAASSASTRAAAMPWRRRVALEP*GQPLRN
Trigger: GTTCCTGAGCGGCTGCCCCCATGGCTCCAGCGCTAC...GCGTCTTCTCCACGGCATCGCCGCCGCCCGCGTAGACGCGCTGGACGCCGCCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
ENST00000497999.1
CDS-3UTR TCA 90 bp GAGGCGGCGTCCAGCGCGTCTACGCGGGCGGCGGCGATGCCGTGGAGAAGACGCTCGGATTTCCCCTCCTaGGCGCCCCTTCACTCCAGC +
Preference number: 4 (lower is better)
Translates to: EAASSASTRAAAMPWRRRSDFPS*APLHSS
Trigger: GCTGGAGTGAAGGGGCGCTCAGGAGGGGAAATCCGA...GCGTCTTCTCCACGGCATCGCCGCCGCCCGCGTAGACGCGCTGGACGCCGCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486389.5
CDS-3UTR TCA 90 bp GAGGCCGGCGCGCAGCACGCGGGGCACGCGGCGGATGGTCAGCGAGACCCGGGTCCACCAGTAGGGCACTaGGGTCACCTGTCGAAGCAA +
Preference number: 4 (lower is better)
Translates to: EAGAQHAGHAADGQRDPGPPVGH*GHLSKQ
Trigger: TTGCTTCGACAGGTGACCTCAGTGCCCTACTGGTGG...ACCCGGGTCTCGCTGACCATCCGCCGCGTGCCCCGCGTGCTGCGCGCCGGCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497999.1
CDS-3UTR GCA 90 bp CAGGAACCTGGGAATCCGAGGGGTCCCGGCCCTGGCGGTCACTTGCCCAGCAGGTCAGCGAGACCCGGGTaGCGCGCACCAGGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: QEPGNPRGPGPGGHLPSRSARPG*RAPGRL
Trigger: GAGCCTGCCTGGTGCGCGGCACCCGGGTCTCGCTGA...CCTGCTGGGCAAGTGACCGCCAGGGCCGGGACCCCTCGGATTCCCAGGTTCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR GCA 90 bp CCAAAGGGGCAGGAACCTGGGAATCCGAGGGGTCCCGGCCCTGGCGGTCACTTGGCCCTGGCGGTCACTTaGCCAGCAGGAGGCCGGCGC +
Preference number: 4 (lower is better)
Translates to: PKGQEPGNPRGPGPGGHLALAVT*PAGGRR
Trigger: GCGCCGGCCTCCTGCTGGGCAAGTGACCGCCAGGGC...CAAGTGACCGCCAGGGCCGGGACCCCTCGGATTCCCAGGTTCCTGCCCCTTTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR GCA 90 bp CCGCGGAGCACCAGCAGGCTGCGCGGTTCCAGCAGTAGCGAGGTGGTGGGCCGGCAGGGGAGCCCCCTTTaGCCACGGTTCCTAGGTCGC +
Preference number: 4 (lower is better)
Translates to: PRSTSRLRGSSSSEVVGRQGSPL*PRFLGR
Trigger: GCGACCTAGGAACCGTGGGCAAAGGGGGCTCCCCTG...CCGGCCCACCACCTCGCTACTGCTGGAACCGCGCAGCCTGCTGGTGCTCCGCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR CCA 90 bp AGGCGGGGCCGCGGAGCACCAGCAGGCTGCGCGGTTCCAGCAGTAGCGAGGTGGGTAGCGCTGGAGCCATaGGGGCAGCCGCTCAGGAAC +
Preference number: 4 (lower is better)
Translates to: RRGRGAPAGCAVPAVARWVALEP*GQPLRN
Trigger: GTTCCTGAGCGGCTGCCCCCATGGCTCCAGCGCTAC...CCACCTCGCTACTGCTGGAACCGCGCAGCCTGCTGGTGCTCCGCGGCCCCGCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
ENST00000497999.1
CDS-3UTR CCA 90 bp ATGGTCAGCGAGACCCGGGTGCCGCGCACCAGGCAGGCTCCCGGCCGCGCCGACAAGTCCAGCACGGTGTaGGAGCCCAGGCTGATGGTG +
Preference number: 4 (lower is better)
Translates to: MVSETRVPRTRQAPGRADKSSTV*EPRLMV
Trigger: CACCATCAGCCTGGGCTCCCACACCGTGCTGGACTT...GTCGGCGCGGCCGGGAGCCTGCCTGGTGCGCGGCACCCGGGTCTCGCTGACCAT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
ENST00000497999.1
CDS-3UTR CCA 90 bp CAGCACGCGGGGCACGCGGCGGATGGTCAGCGAGACCCGGGTGCCGCGCACCAGAAGTCCAGCACGGTGTaGGAGCCCAGGCTGATGGTG +
Preference number: 4 (lower is better)
Translates to: QHAGHAADGQRDPGAAHQKSSTV*EPRLMV
Trigger: CACCATCAGCCTGGGCTCCCACACCGTGCTGGACTT...CTGGTGCGCGGCACCCGGGTCTCGCTGACCATCCGCCGCGTGCCCCGCGTGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
ENST00000497999.1
CDS-3UTR CCA 90 bp CCGACGGGCAGGCTGCCGCATTGGGCGGCGAGGAGGCGGCGTCCAGCGCGTCTAAGGGTCATCGTCCTCTaGCCGCCGCGGCTCGTAGAA +
Preference number: 4 (lower is better)
Translates to: PTGRLPHWAARRRRPARLRVIVL*PPRLVE
Trigger: TTCTACGAGCCGCGGCGGCCAGAGGACGATGACCCT...TAGACGCGCTGGACGCCGCCTCCTCGCCGCCCAATGCGGCAGCCTGCCCGTCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
ENST00000497999.1
CDS-3UTR CCA 90 bp CCCAAAGGGGCAGGAACCTGGGAATCCGAGGGGTCCCGGCCCTGGCGGTCACTTGGGGCACGCGGCGGATaGTCAGCGAGACCCGGGTGC +
Preference number: 4 (lower is better)
Translates to: PKGAGTWESEGSRPWRSLGARGG*SARPGC
Trigger: GCACCCGGGTCTCGCTGACCATCCGCCGCGTGCCCC...AAGTGACCGCCAGGGCCGGGACCCCTCGGATTCCCAGGTTCCTGCCCCTTTGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR TCA 90 bp GGGCCGCGGAGCACCAGCAGGCTGCGCGGTTCCAGCAGTAGCGAGGTGGTGGGCACCATCCCTCGGGGATaGGGAAGCCCACCCCAGTTC +
Preference number: 4 (lower is better)
Translates to: GPRSTSRLRGSSSSEVVGTIPRG*GSPPQF
Trigger: GAACTGGGGTGGGCTTCCTCATCCCCGAGGGATGGT...GCCCACCACCTCGCTACTGCTGGAACCGCGCAGCCTGCTGGTGCTCCGCGGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485128.5
ENST00000486389.5
CDS-3UTR TCA 90 bp CGTGGAGAAGACGCGTGTAGGCGGGGCCGCGGAGCACCAGCAGGCTGCGCGGTTCGTCCTCGTGGGGCATaGTGCCCTCCCCAGGCAGAT +
Preference number: 4 (lower is better)
Translates to: RGEDACRRGRGAPAGCAVRPRGA*CPPQAD
Trigger: ATCTGCCTGGGGAGGGCATCATGCCCCACGAGGACG...AACCGCGCAGCCTGCTGGTGCTCCGCGGCCCCGCCTACACGCGTCTTCTCCACG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000490483.5
ENST00000490986.5
ENST00000497999.1
CDS-3UTR TCA 90 bp ATTGGGCGGCGAGGAGGCGGCGTCCAGCGCGTCTACGCGGGCGGCGGCGATGCCTCACCCTCTGCACCCTaGGTTCTGACAACCTGCTCC +
Preference number: 4 (lower is better)
Translates to: IGRRGGGVQRVYAGGGDASPSAP*VLTTCS
Trigger: GGAGCAGGTTGTCAGAACTCAGGGTGCAGAGGGTGA...GGCATCGCCGCCGCCCGCGTAGACGCGCTGGACGCCGCCTCCTCGCCGCCCAAT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461668.5
CDS-3UTR TCA 90 bp GGCACGCGGCGGATGGTCAGCGAGACCCGGGTGCCGCGCACCAGGCAGGCTCCCAAACCTGCTCCACTCTaGACGGTTCCAGGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: GTRRMVSETRVPRTRQAPKPAPL*TVPGLG
Trigger: TCCCAGCCCTGGAACCGTTCAGAGTGGAGCAGGTTT...GGGAGCCTGCCTGGTGCGCGGCACCCGGGTCTCGCTGACCATCCGCCGCGTGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486389.5
CDS-3UTR GCA 90 bp AGCCCCCTTTGCCCACGGTTCCTAGGTCGCGGAGTCACAGCAGCCCCAAAGGGGGCCCTGGCGGTCACTTaGCCAGCAGGAGGCCGGCGC +
Preference number: 4 (lower is better)
Translates to: SPLCPRFLGRGVTAAPKGALAVT*PAGGRR
Trigger: GCGCCGGCCTCCTGCTGGGCAAGTGACCGCCAGGGC...CCCCTTTGGGGCTGCTGTGACTCCGCGACCTAGGAACCGTGGGCAAAGGGGGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000378875.7
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR GCA 90 bp CCACGGTTCCTAGGTCGCGGAGTCACAGCAGCCCCAAAGGGGCAGGAACCTGGGGCCCTGGCGGTCACTTaGCCAGCAGGAGGCCGGCGC +
Preference number: 4 (lower is better)
Translates to: PRFLGRGVTAAPKGQEPGALAVT*PAGGRR
Trigger: GCGCCGGCCTCCTGCTGGGCAAGTGACCGCCAGGGC...CCCAGGTTCCTGCCCCTTTGGGGCTGCTGTGACTCCGCGACCTAGGAACCGTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000252984.11
ENST00000378875.7
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR GCA 90 bp GAAGACGCGTGTAGGCGGGGCCGCGGAGCACCAGCAGGCTGCGCGGTTCCAGCACAGGGGAGCCCCCTTTaGCCACGGTTCCTAGGTCGC +
Preference number: 4 (lower is better)
Translates to: EDACRRGRGAPAGCAVPAQGSPL*PRFLGR
Trigger: GCGACCTAGGAACCGTGGGCAAAGGGGGCTCCCCTG...TGCTGGAACCGCGCAGCCTGCTGGTGCTCCGCGGCCCCGCCTACACGCGTCTTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR CCA 90 bp GCGGGGCCGCGGAGCACCAGCAGGCTGCGCGGTTCCAGCAGTAGCGAGGTGGTGGAACGGTTCCAGGGCTaGGACTCTGGCGTCCTGCTC +
Preference number: 4 (lower is better)
Translates to: AGPRSTSRLRGSSSSEVVERFQG*DSGVLL
Trigger: GAGCAGGACGCCAGAGTCCCAGCCCTGGAACCGTTC...CACCACCTCGCTACTGCTGGAACCGCGCAGCCTGCTGGTGCTCCGCGGCCCCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490986.5
ENST00000497999.1
CDS-3UTR CCA 90 bp GGCGTCCAGCGCGTCTACGCGGGCGGCGGCGATGCCGTGGAGAAGACGCGTGTAGTAGCGCTGGAGCCATaGGGGCAGCCGCTCAGGAAC +
Preference number: 4 (lower is better)
Translates to: GVQRVYAGGGDAVEKTRVVALEP*GQPLRN
Trigger: GTTCCTGAGCGGCTGCCCCCATGGCTCCAGCGCTAC...TACACGCGTCTTCTCCACGGCATCGCCGCCGCCCGCGTAGACGCGCTGGACGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
ENST00000497999.1
CDS-3UTR CCA 90 bp CCGCATTGGGCGGCGAGGAGGCGGCGTCCAGCGCGTCTACGCGGGCGGCGGCGAGAGGACATGGTTAGCTaGGAGGCCTCCAAAGAGGCT +
Preference number: 4 (lower is better)
Translates to: PHWAARRRRPARLRGRRREDMVS*EASKEA
Trigger: AGCCTCTTTGGAGGCCTCCCAGCTAACCATGTCCTC...TCGCCGCCGCCCGCGTAGACGCGCTGGACGCCGCCTCCTCGCCGCCCAATGCGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
ENST00000497999.1
CDS-3UTR CCA 90 bp AGGCCGGCGCGCAGCACGCGGGGCACGCGGCGGATGGTCAGCGAGACCCGGGTGGAGGACATGGTTAGCTaGGAGGCCTCCAAAGAGGCT +
Preference number: 4 (lower is better)
Translates to: RPARSTRGTRRMVSETRVEDMVS*EASKEA
Trigger: AGCCTCTTTGGAGGCCTCCCAGCTAACCATGTCCTC...CACCCGGGTCTCGCTGACCATCCGCCGCGTGCCCCGCGTGCTGCGCGCCGGCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
ENST00000497999.1
CDS-3UTR CCA 90 bp GGGTCCCGGCCCTGGCGGTCACTTGCCCAGCAGGAGGCCGGCGCGCAGCACGCGTGGTTCACGAGGACATaGTTAGCTGGGAGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: GSRPWRSLAQQEAGAQHAWFTRT*LAGRPP
Trigger: TGGAGGCCTCCCAGCTAACCATGTCCTCGTGAACCA...CGCGTGCTGCGCGCCGGCCTCCTGCTGGGCAAGTGACCGCCAGGGCCGGGACCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR CCA 90 bp TGGTCAGCGAGACCCGGGTGCCGCGCACCAGGCAGGCTCCCGGCCGCGCCGACGTGGTTCACGAGGACATaGTTAGCTGGGAGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: WSARPGCRAPGRLPAAPTWFTRT*LAGRPP
Trigger: TGGAGGCCTCCCAGCTAACCATGTCCTCGTGAACCA...CGTCGGCGCGGCCGGGAGCCTGCCTGGTGCGCGGCACCCGGGTCTCGCTGACCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
ENST00000497999.1
CDS-3UTR CCA 90 bp AGGGGTCCCGGCCCTGGCGGTCACTTGCCCAGCAGGAGGCCGGCGCGCAGCACGAGTCGGGTAGTACAGTaGTCCGTCCTCGTGGGGCAT +
Preference number: 4 (lower is better)
Translates to: RGPGPGGHLPSRRPARSTSRVVQ*SVLVGH
Trigger: ATGCCCCACGAGGACGGACCACTGTACTACCCGACT...CGTGCTGCGCGCCGGCCTCCTGCTGGGCAAGTGACCGCCAGGGCCGGGACCCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000490483.5
ENST00000490986.5
CDS-3UTR CCA 90 bp GGGAATCCGAGGGGTCCCGGCCCTGGCGGTCACTTGCCCAGCAGGAGGCCGGCGAAGTCCAGCACGGTGTaGGAGCCCAGGCTGATGGTG +
Preference number: 4 (lower is better)
Translates to: GNPRGPGPGGHLPSRRPAKSSTV*EPRLMV
Trigger: CACCATCAGCCTGGGCTCCCACACCGTGCTGGACTT...CGCCGGCCTCCTGCTGGGCAAGTGACCGCCAGGGCCGGGACCCCTCGGATTCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR CCA 90 bp CCCACGGTTCCTAGGTCGCGGAGTCACAGCAGCCCCAAAGGGGCAGGAACCTGGGGCAGGCTGCCGCATTaGGCGGCGAGGAGGCGGCGT +
Preference number: 4 (lower is better)
Translates to: PTVPRSRSHSSPKGAGTWGRLPH*AARRRR
Trigger: ACGCCGCCTCCTCGCCGCCCAATGCGGCAGCCTGCC...CCAGGTTCCTGCCCCTTTGGGGCTGCTGTGACTCCGCGACCTAGGAACCGTGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000252984.11
ENST00000378875.7
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR CCA 90 bp GAGCCCCCTTTGCCCACGGTTCCTAGGTCGCGGAGTCACAGCAGCCCCAAAGGGGGCAGGCTGCCGCATTaGGCGGCGAGGAGGCGGCGT +
Preference number: 4 (lower is better)
Translates to: EPPLPTVPRSRSHSSPKGGRLPH*AARRRR
Trigger: ACGCCGCCTCCTCGCCGCCCAATGCGGCAGCCTGCC...CCCTTTGGGGCTGCTGTGACTCCGCGACCTAGGAACCGTGGGCAAAGGGGGCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000378875.7
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR CCA 90 bp GATGCCGTGGAGAAGACGCGTGTAGGCGGGGCCGCGGAGCACCAGCAGGCTGCGCTCGGACTCCTACTCTaGGCTCCCCCGGATCCCCAC +
Preference number: 4 (lower is better)
Translates to: DAVEKTRVGGAAEHQQAALGLLL*APPDPH
Trigger: GTGGGGATCCGGGGGAGCCCAGAGTAGGAGTCCGAG...CGCAGCCTGCTGGTGCTCCGCGGCCCCGCCTACACGCGTCTTCTCCACGGCATC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000486389.5
CDS-3UTR CCA 90 bp AGGAGGCCGGCGCGCAGCACGCGGGGCACGCGGCGGATGGTCAGCGAGACCCGGACAGAGAACATTCTCTaGCCCCACACACAGGGAGCC +
Preference number: 4 (lower is better)
Translates to: RRPARSTRGTRRMVSETRTENIL*PHTQGA
Trigger: GGCTCCCTGTGTGTGGGGCCAGAGAATGTTCTCTGT...CCGGGTCTCGCTGACCATCCGCCGCGTGCCCCGCGTGCTGCGCGCCGGCCTCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486389.5
CDS-3UTR TCA 90 bp AGCACCAGCAGGCTGCGCGGTTCCAGCAGTAGCGAGGTGGTGGGCCGGGGCGGAACCATCCCTCGGGGATaGGGAAGCCCACCCCAGTTC +
Preference number: 4 (lower is better)
Translates to: STSRLRGSSSSEVVGRGGTIPRG*GSPPQF
Trigger: GAACTGGGGTGGGCTTCCTCATCCCCGAGGGATGGT...TCCGCCCCGGCCCACCACCTCGCTACTGCTGGAACCGCGCAGCCTGCTGGTGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000485128.5
ENST00000486389.5
CDS-3UTR TCA 90 bp GGCAGGAACCTGGGAATCCGAGGGGTCCCGGCCCTGGCGGTCACTTGCCCAGCACGTCCTCGTGGGGCATaGTGCCCTCCCCAGGCAGAT +
Preference number: 4 (lower is better)
Translates to: GRNLGIRGVPALAVTCPARPRGA*CPPQAD
Trigger: ATCTGCCTGGGGAGGGCATCATGCCCCACGAGGACG...TGCTGGGCAAGTGACCGCCAGGGCCGGGACCCCTCGGATTCCCAGGTTCCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000490483.5
ENST00000490986.5
CDS-3UTR TCA 90 bp AGCAGGAGGCCGGCGCGCAGCACGCGGGGCACGCGGCGGATGGTCAGCGAGACCCATGCCCGGACACAATaGGCCCCAAGAATAATCCCC +
Preference number: 4 (lower is better)
Translates to: SRRPARSTRGTRRMVSETHARTQ*APRIIP
Trigger: GGGGATTATTCTTGGGGCTCATTGTGTCCGGGCATG...GGTCTCGCTGACCATCCGCCGCGTGCCCCGCGTGCTGCGCGCCGGCCTCCTGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486389.5
CDS-3UTR GCA 90 bp GAGGCCGGCGCGCAGCACGCGGGGCACGCGGCGGATGGTCAGCGAGACCCGGGTTCAACACCAACTCCTTaGACCCAATCCTCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: EAGAQHAGHAADGQRDPGSTPTP*TQSSAL
Trigger: GAGGGCTGAGGATTGGGTGCAAGGAGTTGGTGTTGA...ACCCGGGTCTCGCTGACCATCCGCCGCGTGCCCCGCGTGCTGCGCGCCGGCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485128.5
ENST00000486389.5
CDS-3UTR GCA 90 bp CCACGGTTCCTAGGTCGCGGAGTCACAGCAGCCCCAAAGGGGCAGGAACCTGGGCGCGGGCGGCGGCGATaGCGTGGAGAAGACGCGTGT +
Preference number: 4 (lower is better)
Translates to: PRFLGRGVTAAPKGQEPGRGRRR*RGEDAC
Trigger: ACACGCGTCTTCTCCACGGCATCGCCGCCGCCCGCG...CCCAGGTTCCTGCCCCTTTGGGGCTGCTGTGACTCCGCGACCTAGGAACCGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000252984.11
ENST00000378875.7
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR GCA 90 bp GAGCCCCCTTTGCCCACGGTTCCTAGGTCGCGGAGTCACAGCAGCCCCAAAGGGCGCGGGCGGCGGCGATaGCGTGGAGAAGACGCGTGT +
Preference number: 4 (lower is better)
Translates to: EPPLPTVPRSRSHSSPKGRGRRR*RGEDAC
Trigger: ACACGCGTCTTCTCCACGGCATCGCCGCCGCCCGCG...CCCTTTGGGGCTGCTGTGACTCCGCGACCTAGGAACCGTGGGCAAAGGGGGCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000378875.7
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR GCA 90 bp CCACGGTTCCTAGGTCGCGGAGTCACAGCAGCCCCAAAGGGGCAGGAACCTGGGTCAGCGAGACCCGGGTaGCGCGCACCAGGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: PRFLGRGVTAAPKGQEPGSARPG*RAPGRL
Trigger: GAGCCTGCCTGGTGCGCGGCACCCGGGTCTCGCTGA...CCCAGGTTCCTGCCCCTTTGGGGCTGCTGTGACTCCGCGACCTAGGAACCGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000252984.11
ENST00000378875.7
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR GCA 90 bp TGCCCACGGTTCCTAGGTCGCGGAGTCACAGCAGCCCCAAAGGGGCAGGAACCTGCCCTGGCGGTCACTTaGCCAGCAGGAGGCCGGCGC +
Preference number: 4 (lower is better)
Translates to: CPRFLGRGVTAAPKGQEPALAVT*PAGGRR
Trigger: GCGCCGGCCTCCTGCTGGGCAAGTGACCGCCAGGGC...AGGTTCCTGCCCCTTTGGGGCTGCTGTGACTCCGCGACCTAGGAACCGTGGGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000252984.11
ENST00000378875.7
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR GCA 90 bp CGCGGGGCACGCGGCGGATGGTCAGCGAGACCCGGGTGCCGCGCACCAGGCAGGTCAACACCAACTCCTTaGACCCAATCCGTCCACCAG +
Preference number: 4 (lower is better)
Translates to: RGARGGWSARPGCRAPGRSTPTP*TQSVHQ
Trigger: CTGGTGGACGGATTGGGTGCAAGGAGTTGGTGTTGA...CCTGCCTGGTGCGCGGCACCCGGGTCTCGCTGACCATCCGCCGCGTGCCCCGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490986.5
ENST00000497999.1
CDS-3UTR CCA 90 bp GGCGAGGAGGCGGCGTCCAGCGCGTCTACGCGGGCGGCGGCGATGCCGTGGAGAGAGGACATGGTTAGCTaGGAGGCCTCCAAAGAGGCT +
Preference number: 4 (lower is better)
Translates to: GEEAASSASTRAAAMPWREDMVS*EASKEA
Trigger: AGCCTCTTTGGAGGCCTCCCAGCTAACCATGTCCTC...TCTCCACGGCATCGCCGCCGCCCGCGTAGACGCGCTGGACGCCGCCTCCTCGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
ENST00000497999.1
CDS-3UTR CCA 90 bp TGGGAATCCGAGGGGTCCCGGCCCTGGCGGTCACTTGCCCAGCAGGAGGCCGGCAAGTCCAGCACGGTGTaGGAGCCCAGGCTGATGGTG +
Preference number: 4 (lower is better)
Translates to: WESEGSRPWRSLAQQEAGKSSTV*EPRLMV
Trigger: CACCATCAGCCTGGGCTCCCACACCGTGCTGGACTT...GCCGGCCTCCTGCTGGGCAAGTGACCGCCAGGGCCGGGACCCCTCGGATTCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR CCA 90 bp GCACCAGCAGGCTGCGCGGTTCCAGCAGTAGCGAGGTGGTGGGCCGGGGCGGAGAAGTCCAGCACGGTGTaGGAGCCCAGGCTGATGGTG +
Preference number: 4 (lower is better)
Translates to: APAGCAVPAVARWWAGAEKSSTV*EPRLMV
Trigger: CACCATCAGCCTGGGCTCCCACACCGTGCTGGACTT...CTCCGCCCCGGCCCACCACCTCGCTACTGCTGGAACCGCGCAGCCTGCTGGTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
ENST00000497999.1
CDS-3UTR CCA 90 bp GATGCCGTGGAGAAGACGCGTGTAGGCGGGGCCGCGGAGCACCAGCAGGCTGCGAGGGTCATCGTCCTCTaGCCGCCGCGGCTCGTAGAA +
Preference number: 4 (lower is better)
Translates to: DAVEKTRVGGAAEHQQAARVIVL*PPRLVE
Trigger: TTCTACGAGCCGCGGCGGCCAGAGGACGATGACCCT...CGCAGCCTGCTGGTGCTCCGCGGCCCCGCCTACACGCGTCTTCTCCACGGCATC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
ENST00000497999.1
CDS-3UTR CCA 90 bp TGCCCACGGTTCCTAGGTCGCGGAGTCACAGCAGCCCCAAAGGGGCAGGAACCTGGGGCACGCGGCGGATaGTCAGCGAGACCCGGGTGC +
Preference number: 4 (lower is better)
Translates to: CPRFLGRGVTAAPKGQEPGARGG*SARPGC
Trigger: GCACCCGGGTCTCGCTGACCATCCGCCGCGTGCCCC...AGGTTCCTGCCCCTTTGGGGCTGCTGTGACTCCGCGACCTAGGAACCGTGGGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000252984.11
ENST00000378875.7
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR CCA 90 bp CCCACGGTTCCTAGGTCGCGGAGTCACAGCAGCCCCAAAGGGGCAGGAACCTGGGAGGGGTCCCGGCCCTaGCGGTCACTTGCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: PTVPRSRSHSSPKGAGTWEGSRP*RSLAQQ
Trigger: CTGCTGGGCAAGTGACCGCCAGGGCCGGGACCCCTC...CCAGGTTCCTGCCCCTTTGGGGCTGCTGTGACTCCGCGACCTAGGAACCGTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000252984.11
ENST00000378875.7
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR TCA 90 bp GGCAGGCTGCCGCATTGGGCGGCGAGGAGGCGGCGTCCAGCGCGTCTACGCGGGATCTTCTTCCCTCCCTaGACCATTCAGATCCCCGAC +
Preference number: 4 (lower is better)
Translates to: GRLPHWAARRRRPARLRGIFFPP*TIQIPD
Trigger: GTCGGGGATCTGAATGGTTCAGGGAGGGAAGAAGAT...CCCGCGTAGACGCGCTGGACGCCGCCTCCTCGCCGCCCAATGCGGCAGCCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486389.5
CDS-3UTR GCA 90 bp CACGCGGCGGATGGTCAGCGAGACCCGGGTGCCGCGCACCAGGCAGGCTCCCGGTCAACACCAACTCCTTaGACCCAATCCTCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: HAADGQRDPGAAHQAGSRSTPTP*TQSSAL
Trigger: GAGGGCTGAGGATTGGGTGCAAGGAGTTGGTGTTGA...CCGGGAGCCTGCCTGGTGCGCGGCACCCGGGTCTCGCTGACCATCCGCCGCGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485128.5
ENST00000486389.5
CDS-3UTR GCA 90 bp CAGGCTGCCGCATTGGGCGGCGAGGAGGCGGCGTCCAGCGCGTCTACGCGGGCGGTAGATTACAGGTGGTaGCTGCTCCACTCTGAACGG +
Preference number: 4 (lower is better)
Translates to: QAAALGGEEAASSASTRAVDYRW*LLHSER
Trigger: CCGTTCAGAGTGGAGCAGGCACCACCTGTAATCTAC...CGCCCGCGTAGACGCGCTGGACGCCGCCTCCTCGCCGCCCAATGCGGCAGCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000485128.5
ENST00000490986.5
ENST00000497999.1
CDS-3UTR GCA 90 bp TGCCCACGGTTCCTAGGTCGCGGAGTCACAGCAGCCCCAAAGGGGCAGGAACCTTCAGCGAGACCCGGGTaGCGCGCACCAGGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: CPRFLGRGVTAAPKGQEPSARPG*RAPGRL
Trigger: GAGCCTGCCTGGTGCGCGGCACCCGGGTCTCGCTGA...AGGTTCCTGCCCCTTTGGGGCTGCTGTGACTCCGCGACCTAGGAACCGTGGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000252984.11
ENST00000378875.7
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR GCA 90 bp TTGCCCACGGTTCCTAGGTCGCGGAGTCACAGCAGCCCCAAAGGGGCAGGAACCTCAGCGAGACCCGGGTaGCGCGCACCAGGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: LPTVPRSRSHSSPKGAGTSARPG*RAPGRL
Trigger: GAGCCTGCCTGGTGCGCGGCACCCGGGTCTCGCTGA...GGTTCCTGCCCCTTTGGGGCTGCTGTGACTCCGCGACCTAGGAACCGTGGGCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000252984.11
ENST00000378875.7
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR GCA 90 bp CAGCACGCGGGGCACGCGGCGGATGGTCAGCGAGACCCGGGTGCCGCGCACCAGTCAACACCAACTCCTTaGACCCAATCCGTCCACCAG +
Preference number: 4 (lower is better)
Translates to: QHAGHAADGQRDPGAAHQSTPTP*TQSVHQ
Trigger: CTGGTGGACGGATTGGGTGCAAGGAGTTGGTGTTGA...CTGGTGCGCGGCACCCGGGTCTCGCTGACCATCCGCCGCGTGCCCCGCGTGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490986.5
ENST00000497999.1
CDS-3UTR GCA 90 bp CCGCGGAGCACCAGCAGGCTGCGCGGTTCCAGCAGTAGCGAGGTGGTGGGCCGGACCCCGCTTCAGACCTaGAACTGTGAGCCCGGCTAT +
Preference number: 4 (lower is better)
Translates to: PRSTSRLRGSSSSEVVGRTPLQT*NCEPGY
Trigger: ATAGCCGGGCTCACAGTTGCAGGTCTGAAGCGGGGT...CCGGCCCACCACCTCGCTACTGCTGGAACCGCGCAGCCTGCTGGTGCTCCGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486389.5
CDS-3UTR CCA 90 bp CCAAAGGGGCAGGAACCTGGGAATCCGAGGGGTCCCGGCCCTGGCGGTCACTTGGTAGCGCTGGAGCCATaGGGGCAGCCGCTCAGGAAC +
Preference number: 4 (lower is better)
Translates to: PKGQEPGNPRGPGPGGHLVALEP*GQPLRN
Trigger: GTTCCTGAGCGGCTGCCCCCATGGCTCCAGCGCTAC...CAAGTGACCGCCAGGGCCGGGACCCCTCGGATTCCCAGGTTCCTGCCCCTTTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR CCA 90 bp CGAGGAGGCGGCGTCCAGCGCGTCTACGCGGGCGGCGGCGATGCCGTGGAGAAGGAGGACATGGTTAGCTaGGAGGCCTCCAAAGAGGCT +
Preference number: 4 (lower is better)
Translates to: RGGGVQRVYAGGGDAVEKEDMVS*EASKEA
Trigger: AGCCTCTTTGGAGGCCTCCCAGCTAACCATGTCCTC...CTTCTCCACGGCATCGCCGCCGCCCGCGTAGACGCGCTGGACGCCGCCTCCTCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
ENST00000497999.1
CDS-3UTR CCA 90 bp GACGGGCAGGCTGCCGCATTGGGCGGCGAGGAGGCGGCGTCCAGCGCGTCTACGTGGTTCACGAGGACATaGTTAGCTGGGAGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: DGQAAALGGEEAASSASTWFTRT*LAGRPP
Trigger: TGGAGGCCTCCCAGCTAACCATGTCCTCGTGAACCA...CGTAGACGCGCTGGACGCCGCCTCCTCGCCGCCCAATGCGGCAGCCTGCCCGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
ENST00000497999.1
CDS-3UTR CCA 90 bp AGGCCGGCGCGCAGCACGCGGGGCACGCGGCGGATGGTCAGCGAGACCCGGGTGTCCCCAGGCAGATACTaGTTCACGAGGACATGGTTA +
Preference number: 4 (lower is better)
Translates to: RPARSTRGTRRMVSETRVSPGRY*FTRTWL
Trigger: TAACCATGTCCTCGTGAACCAGTATCTGCCTGGGGA...CACCCGGGTCTCGCTGACCATCCGCCGCGTGCCCCGCGTGCTGCGCGCCGGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
ENST00000497999.1
CDS-3UTR CCA 90 bp GGAGAAGACGCGTGTAGGCGGGGCCGCGGAGCACCAGCAGGCTGCGCGGTTCCAAAGTCCAGCACGGTGTaGGAGCCCAGGCTGATGGTG +
Preference number: 4 (lower is better)
Translates to: GEDACRRGRGAPAGCAVPKSSTV*EPRLMV
Trigger: CACCATCAGCCTGGGCTCCCACACCGTGCTGGACTT...TGGAACCGCGCAGCCTGCTGGTGCTCCGCGGCCCCGCCTACACGCGTCTTCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
ENST00000497999.1
CDS-3UTR CCA 90 bp AACCTGGGAATCCGAGGGGTCCCGGCCCTGGCGGTCACTTGCCCAGCAGGAGGCAGGGTCATCGTCCTCTaGCCGCCGCGGCTCGTAGAA +
Preference number: 4 (lower is better)
Translates to: NLGIRGVPALAVTCPAGGRVIVL*PPRLVE
Trigger: TTCTACGAGCCGCGGCGGCCAGAGGACGATGACCCT...GCCTCCTGCTGGGCAAGTGACCGCCAGGGCCGGGACCCCTCGGATTCCCAGGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR CCA 90 bp ATAACCCAGGGGAGCCCCCTTTGCCCACGGTTCCTAGGTCGCGGAGTCACAGCAGGGGCACGCGGCGGATaGTCAGCGAGACCCGGGTGC +
Preference number: 4 (lower is better)
Translates to: ITQGSPLCPRFLGRGVTAGARGG*SARPGC
Trigger: GCACCCGGGTCTCGCTGACCATCCGCCGCGTGCCCC...TGCTGTGACTCCGCGACCTAGGAACCGTGGGCAAAGGGGGCTCCCCTGGGTTAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000378875.7
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR CCA 90 bp CTTTGCCCACGGTTCCTAGGTCGCGGAGTCACAGCAGCCCCAAAGGGGCAGGAAGGGGCACGCGGCGGATaGTCAGCGAGACCCGGGTGC +
Preference number: 4 (lower is better)
Translates to: LCPRFLGRGVTAAPKGQEGARGG*SARPGC
Trigger: GCACCCGGGTCTCGCTGACCATCCGCCGCGTGCCCC...TTCCTGCCCCTTTGGGGCTGCTGTGACTCCGCGACCTAGGAACCGTGGGCAAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000378875.7
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR TCA 90 bp ACCCAGGGGAGCCCCCTTTGCCCACGGTTCCTAGGTCGCGGAGTCACAGCAGCCGTGCCTGCTCCACTCTaGACGGTTCCAGGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: TQGSPLCPRFLGRGVTAAVPAPL*TVPGLG
Trigger: TCCCAGCCCTGGAACCGTTCAGAGTGGAGCAGGCAC...GGCTGCTGTGACTCCGCGACCTAGGAACCGTGGGCAAAGGGGGCTCCCCTGGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378875.7
ENST00000485128.5
ENST00000490986.5
CDS-3UTR TCA 90 bp CGGGCAGGCTGCCGCATTGGGCGGCGAGGAGGCGGCGTCCAGCGCGTCTACGCGAAAGAGGCTGAGGTTTaGCACTTTGTCCACGTAGCG +
Preference number: 4 (lower is better)
Translates to: RAGCRIGRRGGGVQRVYAKEAEV*HFVHVA
Trigger: CGCTACGTGGACAAAGTGTCAAACCTCAGCCTCTTT...CGCGTAGACGCGCTGGACGCCGCCTCCTCGCCGCCCAATGCGGCAGCCTGCCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
ENST00000497999.1
CDS-3UTR TCA 90 bp GGGGCACGCGGCGGATGGTCAGCGAGACCCGGGTGCCGCGCACCAGGCAGGCTCAAAGAGGCTGAGGTTTaGCACTTTGTCCACGTAGCG +
Preference number: 4 (lower is better)
Translates to: GARGGWSARPGCRAPGRLKEAEV*HFVHVA
Trigger: CGCTACGTGGACAAAGTGTCAAACCTCAGCCTCTTT...GAGCCTGCCTGGTGCGCGGCACCCGGGTCTCGCTGACCATCCGCCGCGTGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
ENST00000497999.1
CDS-3UTR TCA 90 bp CCACGGTTCCTAGGTCGCGGAGTCACAGCAGCCCCAAAGGGGCAGGAACCTGGGCGTCCTCGTGGGGCATaGTGCCCTCCCCAGGCAGAT +
Preference number: 4 (lower is better)
Translates to: PRFLGRGVTAAPKGQEPGRPRGA*CPPQAD
Trigger: ATCTGCCTGGGGAGGGCATCATGCCCCACGAGGACG...CCCAGGTTCCTGCCCCTTTGGGGCTGCTGTGACTCCGCGACCTAGGAACCGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000252984.11
ENST00000378875.7
ENST00000490483.5
ENST00000490986.5
CDS-3UTR TCA 90 bp AGCACCAGCAGGCTGCGCGGTTCCAGCAGTAGCGAGGTGGTGGGCCGGGGCGGACCTGTGACCCCAATCTaGGCCTCCTCAGACATGTCC +
Preference number: 4 (lower is better)
Translates to: STSRLRGSSSSEVVGRGGPVTPI*ASSDMS
Trigger: GGACATGTCTGAGGAGGCTCAGATTGGGGTCACAGG...TCCGCCCCGGCCCACCACCTCGCTACTGCTGGAACCGCGCAGCCTGCTGGTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486389.5
CDS-3UTR TCA 90 bp GCGTGTAGGCGGGGCCGCGGAGCACCAGCAGGCTGCGCGGTTCCAGCAGTAGCGTCAGACCTGCAACTGTaGGCCCGGCTATCAACACTC +
Preference number: 4 (lower is better)
Translates to: ACRRGRGAPAGCAVPAVASDLQL*ARLSTL
Trigger: GAGTGTTGATAGCCGGGCTCACAGTTGCAGGTCTGA...CGCTACTGCTGGAACCGCGCAGCCTGCTGGTGCTCCGCGGCCCCGCCTACACGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486389.5
CDS-3UTR GCA 90 bp AACCCAGGGGAGCCCCCTTTGCCCACGGTTCCTAGGTCGCGGAGTCACAGCAGCGGAGCACCAGCAGGCTaGGCGGTTCCAGCAGTAGCG +
Preference number: 4 (lower is better)
Translates to: NPGEPPLPTVPRSRSHSSGAPAG*AVPAVA
Trigger: CGCTACTGCTGGAACCGCGCAGCCTGCTGGTGCTCC...GCTGCTGTGACTCCGCGACCTAGGAACCGTGGGCAAAGGGGGCTCCCCTGGGTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000378875.7
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR GCA 90 bp CTTTGCCCACGGTTCCTAGGTCGCGGAGTCACAGCAGCCCCAAAGGGGCAGGAACGCGGGCGGCGGCGATaGCGTGGAGAAGACGCGTGT +
Preference number: 4 (lower is better)
Translates to: LCPRFLGRGVTAAPKGQERGRRR*RGEDAC
Trigger: ACACGCGTCTTCTCCACGGCATCGCCGCCGCCCGCG...TTCCTGCCCCTTTGGGGCTGCTGTGACTCCGCGACCTAGGAACCGTGGGCAAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000378875.7
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR GCA 90 bp ATAACCCAGGGGAGCCCCCTTTGCCCACGGTTCCTAGGTCGCGGAGTCACAGCACGCGGGCGGCGGCGATaGCGTGGAGAAGACGCGTGT +
Preference number: 4 (lower is better)
Translates to: ITQGSPLCPRFLGRGVTARGRRR*RGEDAC
Trigger: ACACGCGTCTTCTCCACGGCATCGCCGCCGCCCGCG...TGCTGTGACTCCGCGACCTAGGAACCGTGGGCAAAGGGGGCTCCCCTGGGTTAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000378875.7
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR CCA 90 bp CGCGGGGCACGCGGCGGATGGTCAGCGAGACCCGGGTGCCGCGCACCAGGCAGGGAGCTGGGTCCACTTTaGCTTTGGGGCATTAAAAAC +
Preference number: 4 (lower is better)
Translates to: RGARGGWSARPGCRAPGRELGPL*LWGIKN
Trigger: GTTTTTAATGCCCCAAAGCCAAAGTGGACCCAGCTC...CCTGCCTGGTGCGCGGCACCCGGGTCTCGCTGACCATCCGCCGCGTGCCCCGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR CCA 90 bp CCACGGTTCCTAGGTCGCGGAGTCACAGCAGCCCCAAAGGGGCAGGAACCTGGGGTAGCGCTGGAGCCATaGGGGCAGCCGCTCAGGAAC +
Preference number: 4 (lower is better)
Translates to: PRFLGRGVTAAPKGQEPGVALEP*GQPLRN
Trigger: GTTCCTGAGCGGCTGCCCCCATGGCTCCAGCGCTAC...CCCAGGTTCCTGCCCCTTTGGGGCTGCTGTGACTCCGCGACCTAGGAACCGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000252984.11
ENST00000378875.7
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR CCA 90 bp GGCAGGCTGCCGCATTGGGCGGCGAGGAGGCGGCGTCCAGCGCGTCTACGCGGGTCCCCAGGCAGATACTaGTTCACGAGGACATGGTTA +
Preference number: 4 (lower is better)
Translates to: GRLPHWAARRRRPARLRGSPGRY*FTRTWL
Trigger: TAACCATGTCCTCGTGAACCAGTATCTGCCTGGGGA...CCCGCGTAGACGCGCTGGACGCCGCCTCCTCGCCGCCCAATGCGGCAGCCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
ENST00000497999.1
CDS-3UTR CCA 90 bp ACCCAGGGGAGCCCCCTTTGCCCACGGTTCCTAGGTCGCGGAGTCACAGCAGCCAGGGTCATCGTCCTCTaGCCGCCGCGGCTCGTAGAA +
Preference number: 4 (lower is better)
Translates to: TQGSPLCPRFLGRGVTAARVIVL*PPRLVE
Trigger: TTCTACGAGCCGCGGCGGCCAGAGGACGATGACCCT...GGCTGCTGTGACTCCGCGACCTAGGAACCGTGGGCAAAGGGGGCTCCCCTGGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000378875.7
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR TCA 90 bp AGGAGGCCGGCGCGCAGCACGCGGGGCACGCGGCGGATGGTCAGCGAGACCCGGCCTCTTCTTTGGAGATaGAGTCAGGGACATAGTAGA +
Preference number: 4 (lower is better)
Translates to: RRPARSTRGTRRMVSETRPLLWR*SQGHSR
Trigger: TCTACTATGTCCCTGACTTCATCTCCAAAGAAGAGG...CCGGGTCTCGCTGACCATCCGCCGCGTGCCCCGCGTGCTGCGCGCCGGCCTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000461668.5
ENST00000485128.5
ENST00000490483.5
ENST00000490986.5
ENST00000497999.1
CDS-3UTR TCA 90 bp GGGAATCCGAGGGGTCCCGGCCCTGGCGGTCACTTGCCCAGCAGGAGGCCGGCGAAAGAGGCTGAGGTTTaGCACTTTGTCCACGTAGCG +
Preference number: 4 (lower is better)
Translates to: GNPRGPGPGGHLPSRRPAKEAEV*HFVHVA
Trigger: CGCTACGTGGACAAAGTGTCAAACCTCAGCCTCTTT...CGCCGGCCTCCTGCTGGGCAAGTGACCGCCAGGGCCGGGACCCCTCGGATTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR TCA 90 bp GGAATCCGAGGGGTCCCGGCCCTGGCGGTCACTTGCCCAGCAGGAGGCCGGCGCAAAGAGGCTGAGGTTTaGCACTTTGTCCACGTAGCG +
Preference number: 4 (lower is better)
Translates to: GIRGVPALAVTCPAGGRRKEAEV*HFVHVA
Trigger: CGCTACGTGGACAAAGTGTCAAACCTCAGCCTCTTT...GCGCCGGCCTCCTGCTGGGCAAGTGACCGCCAGGGCCGGGACCCCTCGGATTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR TCA 90 bp GCGTGTAGGCGGGGCCGCGGAGCACCAGCAGGCTGCGCGGTTCCAGCAGTAGCGGGCCTCCAAAGAGGCTaGGGTTTGACACTTTGTCCA +
Preference number: 4 (lower is better)
Translates to: ACRRGRGAPAGCAVPAVAGLQRG*GLTLCP
Trigger: TGGACAAAGTGTCAAACCTCAGCCTCTTTGGAGGCC...CGCTACTGCTGGAACCGCGCAGCCTGCTGGTGCTCCGCGGCCCCGCCTACACGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
ENST00000497999.1
CDS-3UTR TCA 90 bp CCCACGGTTCCTAGGTCGCGGAGTCACAGCAGCCCCAAAGGGGCAGGAACCTGGTGTGGGAGCCCAGGCTaGTGGTGCATGATGCCCTCC +
Preference number: 4 (lower is better)
Translates to: PTVPRSRSHSSPKGAGTWCGSPG*WCMMPS
Trigger: GGAGGGCATCATGCACCATCAGCCTGGGCTCCCACA...CCAGGTTCCTGCCCCTTTGGGGCTGCTGTGACTCCGCGACCTAGGAACCGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485128.5
ENST00000486389.5
CDS-3UTR GCA 90 bp TGCCCACGGTTCCTAGGTCGCGGAGTCACAGCAGCCCCAAAGGGGCAGGAACCTGGAGCACCAGCAGGCTaGGCGGTTCCAGCAGTAGCG +
Preference number: 4 (lower is better)
Translates to: CPRFLGRGVTAAPKGQEPGAPAG*AVPAVA
Trigger: CGCTACTGCTGGAACCGCGCAGCCTGCTGGTGCTCC...AGGTTCCTGCCCCTTTGGGGCTGCTGTGACTCCGCGACCTAGGAACCGTGGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000252984.11
ENST00000378875.7
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR CCA 90 bp CCCACGGTTCCTAGGTCGCGGAGTCACAGCAGCCCCAAAGGGGCAGGAACCTGGGAACGGTTCCAGGGCTaGGACTCTGGCGTCCTGCTC +
Preference number: 4 (lower is better)
Translates to: PTVPRSRSHSSPKGAGTWERFQG*DSGVLL
Trigger: GAGCAGGACGCCAGAGTCCCAGCCCTGGAACCGTTC...CCAGGTTCCTGCCCCTTTGGGGCTGCTGTGACTCCGCGACCTAGGAACCGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000252984.11
ENST00000378875.7
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490986.5
CDS-3UTR CCA 90 bp CCGCGGAGCACCAGCAGGCTGCGCGGTTCCAGCAGTAGCGAGGTGGTGGGCCGGTTTCTCCCAGAGAGCTaGGTCCACTTTGGCTTTGGG +
Preference number: 4 (lower is better)
Translates to: PRSTSRLRGSSSSEVVGRFLPES*VHFGFG
Trigger: CCCAAAGCCAAAGTGGACCCAGCTCTCTGGGAGAAA...CCGGCCCACCACCTCGCTACTGCTGGAACCGCGCAGCCTGCTGGTGCTCCGCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR CCA 90 bp CTGGGAATCCGAGGGGTCCCGGCCCTGGCGGTCACTTGCCCAGCAGGAGGCCGGTTTCTCCCAGAGAGCTaGGTCCACTTTGGCTTTGGG +
Preference number: 4 (lower is better)
Translates to: LGIRGVPALAVTCPAGGRFLPES*VHFGFG
Trigger: CCCAAAGCCAAAGTGGACCCAGCTCTCTGGGAGAAA...CCGGCCTCCTGCTGGGCAAGTGACCGCCAGGGCCGGGACCCCTCGGATTCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR CCA 90 bp CCAGGGGAGCCCCCTTTGCCCACGGTTCCTAGGTCGCGGAGTCACAGCAGCCCCAGTCGGGTAGTACAGTaGTCCGTCCTCGTGGGGCAT +
Preference number: 4 (lower is better)
Translates to: PGEPPLPTVPRSRSHSSPSRVVQ*SVLVGH
Trigger: ATGCCCCACGAGGACGGACCACTGTACTACCCGACT...GGGGCTGCTGTGACTCCGCGACCTAGGAACCGTGGGCAAAGGGGGCTCCCCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000378875.7
ENST00000490483.5
ENST00000490986.5
CDS-3UTR CCA 90 bp CCACGGTTCCTAGGTCGCGGAGTCACAGCAGCCCCAAAGGGGCAGGAACCTGGGAGGGTCATCGTCCTCTaGCCGCCGCGGCTCGTAGAA +
Preference number: 4 (lower is better)
Translates to: PRFLGRGVTAAPKGQEPGRVIVL*PPRLVE
Trigger: TTCTACGAGCCGCGGCGGCCAGAGGACGATGACCCT...CCCAGGTTCCTGCCCCTTTGGGGCTGCTGTGACTCCGCGACCTAGGAACCGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000252984.11
ENST00000378875.7
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR CCA 90 bp AACCCAGGGGAGCCCCCTTTGCCCACGGTTCCTAGGTCGCGGAGTCACAGCAGCAGGGTCATCGTCCTCTaGCCGCCGCGGCTCGTAGAA +
Preference number: 4 (lower is better)
Translates to: NPGEPPLPTVPRSRSHSSRVIVL*PPRLVE
Trigger: TTCTACGAGCCGCGGCGGCCAGAGGACGATGACCCT...GCTGCTGTGACTCCGCGACCTAGGAACCGTGGGCAAAGGGGGCTCCCCTGGGTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000378875.7
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR TCA 90 bp TGCCCACGGTTCCTAGGTCGCGGAGTCACAGCAGCCCCAAAGGGGCAGGAACCTGTGCCTGCTCCACTCTaGACGGTTCCAGGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: CPRFLGRGVTAAPKGQEPVPAPL*TVPGLG
Trigger: TCCCAGCCCTGGAACCGTTCAGAGTGGAGCAGGCAC...AGGTTCCTGCCCCTTTGGGGCTGCTGTGACTCCGCGACCTAGGAACCGTGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252984.11
ENST00000378875.7
ENST00000485128.5
ENST00000490986.5
CDS-3UTR TCA 90 bp TTGCCCACGGTTCCTAGGTCGCGGAGTCACAGCAGCCCCAAAGGGGCAGGAACCACCATCCCTCGGGGATaGGGAAGCCCACCCCAGTTC +
Preference number: 4 (lower is better)
Translates to: LPTVPRSRSHSSPKGAGTTIPRG*GSPPQF
Trigger: GAACTGGGGTGGGCTTCCTCATCCCCGAGGGATGGT...GGTTCCTGCCCCTTTGGGGCTGCTGTGACTCCGCGACCTAGGAACCGTGGGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000252984.11
ENST00000378875.7
ENST00000485128.5
ENST00000486389.5
CDS-3UTR TCA 90 bp GGCGGAGGCCGAGGCTGTTCTGTAGGGTCATCGTCCTCTGGCCGCCGCGGCTCGGGCCTCCAAAGAGGCTaGGGTTTGACACTTTGTCCA +
Preference number: 4 (lower is better)
Translates to: GGGRGCSVGSSSSGRRGSGLQRG*GLTLCP
Trigger: TGGACAAAGTGTCAAACCTCAGCCTCTTTGGAGGCC...CGAGCCGCGGCGGCCAGAGGACGATGACCCTACAGAACAGCCTCGGCCTCCGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000490483.5
ENST00000490986.5
ENST00000497999.1
CDS-3UTR TCA 90 bp AACCCAGGGGAGCCCCCTTTGCCCACGGTTCCTAGGTCGCGGAGTCACAGCAGCCAACCTGCTCCACTCTaGACGGTTCCAGGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: NPGEPPLPTVPRSRSHSSQPAPL*TVPGLG
Trigger: TCCCAGCCCTGGAACCGTTCAGAGTGGAGCAGGTTG...GCTGCTGTGACTCCGCGACCTAGGAACCGTGGGCAAAGGGGGCTCCCCTGGGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461668.5
CDS-3UTR TCA 90 bp GCTGACAGTCGGGTAGTACAGTGGTCCGTCCTCGTGGGGCATGATGCCCTCCCCACCATCCCTCGGGGATaGGGAAGCCCACCAGTAGGG +
Preference number: 4 (lower is better)
Translates to: ADSRVVQWSVLVGHDALPTIPRG*GSPPVG
Trigger: CCCTACTGGTGGGCTTCCTCATCCCCGAGGGATGGT...GGGGAGGGCATCATGCCCCACGAGGACGGACCACTGTACTACCCGACTGTCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000497999.1
CDS-3UTR GCA 90 bp AATAACCCAGGGGAGCCCCCTTTGCCCACGGTTCCTAGGTCGCGGAGTCACAGCCAGGGGAGCCCCCTTTaGCCACGGTTCCTAGGTCGC +
Preference number: 4 (lower is better)
Translates to: NNPGEPPLPTVPRSRSHSQGSPL*PRFLGR
Trigger: GCGACCTAGGAACCGTGGGCAAAGGGGGCTCCCCTG...GCTGTGACTCCGCGACCTAGGAACCGTGGGCAAAGGGGGCTCCCCTGGGTTATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000378875.7
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR GCA 90 bp CTTTGCCCACGGTTCCTAGGTCGCGGAGTCACAGCAGCCCCAAAGGGGCAGGAACAGGGGAGCCCCCTTTaGCCACGGTTCCTAGGTCGC +
Preference number: 4 (lower is better)
Translates to: LCPRFLGRGVTAAPKGQEQGSPL*PRFLGR
Trigger: GCGACCTAGGAACCGTGGGCAAAGGGGGCTCCCCTG...TTCCTGCCCCTTTGGGGCTGCTGTGACTCCGCGACCTAGGAACCGTGGGCAAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000378875.7
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR GCA 90 bp GGAGAAGACGCGTGTAGGCGGGGCCGCGGAGCACCAGCAGGCTGCGCGGTTCCACCGAATCCCATTCTGTaGACTCCTGTGACCCCAATC +
Preference number: 4 (lower is better)
Translates to: GEDACRRGRGAPAGCAVPPNPIL*TPVTPI
Trigger: GATTGGGGTCACAGGAGTGCACAGAATGGGATTCGG...TGGAACCGCGCAGCCTGCTGGTGCTCCGCGGCCCCGCCTACACGCGTCTTCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486389.5
CDS-3UTR CCA 90 bp TTGCCCACGGTTCCTAGGTCGCGGAGTCACAGCAGCCCCAAAGGGGCAGGAACCGAACGGTTCCAGGGCTaGGACTCTGGCGTCCTGCTC +
Preference number: 4 (lower is better)
Translates to: LPTVPRSRSHSSPKGAGTERFQG*DSGVLL
Trigger: GAGCAGGACGCCAGAGTCCCAGCCCTGGAACCGTTC...GGTTCCTGCCCCTTTGGGGCTGCTGTGACTCCGCGACCTAGGAACCGTGGGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000252984.11
ENST00000378875.7
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490986.5
CDS-3UTR CCA 90 bp GGGAATCCGAGGGGTCCCGGCCCTGGCGGTCACTTGCCCAGCAGGAGGCCGGCGGAGCTGGGTCCACTTTaGCTTTGGGGCATTAAAAAC +
Preference number: 4 (lower is better)
Translates to: GNPRGPGPGGHLPSRRPAELGPL*LWGIKN
Trigger: GTTTTTAATGCCCCAAAGCCAAAGTGGACCCAGCTC...CGCCGGCCTCCTGCTGGGCAAGTGACCGCCAGGGCCGGGACCCCTCGGATTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR CCA 90 bp GAGAAGACGCGTGTAGGCGGGGCCGCGGAGCACCAGCAGGCTGCGCGGTTCCAGTTTCTCCCAGAGAGCTaGGTCCACTTTGGCTTTGGG +
Preference number: 4 (lower is better)
Translates to: EKTRVGGAAEHQQAARFQFLPES*VHFGFG
Trigger: CCCAAAGCCAAAGTGGACCCAGCTCTCTGGGAGAAA...CTGGAACCGCGCAGCCTGCTGGTGCTCCGCGGCCCCGCCTACACGCGTCTTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR CCA 90 bp AATAACCCAGGGGAGCCCCCTTTGCCCACGGTTCCTAGGTCGCGGAGTCACAGCGTAGCGCTGGAGCCATaGGGGCAGCCGCTCAGGAAC +
Preference number: 4 (lower is better)
Translates to: NNPGEPPLPTVPRSRSHSVALEP*GQPLRN
Trigger: GTTCCTGAGCGGCTGCCCCCATGGCTCCAGCGCTAC...GCTGTGACTCCGCGACCTAGGAACCGTGGGCAAAGGGGGCTCCCCTGGGTTATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000378875.7
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR CCA 90 bp GGCAGGAACCTGGGAATCCGAGGGGTCCCGGCCCTGGCGGTCACTTGCCCAGCATGGTTCACGAGGACATaGTTAGCTGGGAGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: GRNLGIRGVPALAVTCPAWFTRT*LAGRPP
Trigger: TGGAGGCCTCCCAGCTAACCATGTCCTCGTGAACCA...TGCTGGGCAAGTGACCGCCAGGGCCGGGACCCCTCGGATTCCCAGGTTCCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR CCA 90 bp GGCGGCGTCCAGCGCGTCTACGCGGGCGGCGGCGATGCCGTGGAGAAGACGCGTGGTCCACTTTGGCTTTaGGGCATTAAAAACCTGCTC +
Preference number: 4 (lower is better)
Translates to: GGVQRVYAGGGDAVEKTRGPLWL*GIKNLL
Trigger: GAGCAGGTTTTTAATGCCCCAAAGCCAAAGTGGACC...ACGCGTCTTCTCCACGGCATCGCCGCCGCCCGCGTAGACGCGCTGGACGCCGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486389.5
CDS-3UTR TCA 90 bp AATCCGAGGGGTCCCGGCCCTGGCGGTCACTTGCCCAGCAGGAGGCCGGCGCGCCCTCTTCTTTGGAGATaGAGTCAGGGACATAGTAGA +
Preference number: 4 (lower is better)
Translates to: NPRGPGPGGHLPSRRPARPLLWR*SQGHSR
Trigger: TCTACTATGTCCCTGACTTCATCTCCAAAGAAGAGG...GCGCGCCGGCCTCCTGCTGGGCAAGTGACCGCCAGGGCCGGGACCCCTCGGATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461668.5
ENST00000485128.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR TCA 90 bp GGAACCTGGGAATCCGAGGGGTCCCGGCCCTGGCGGTCACTTGCCCAGCAGGAGGGCCTCCAAAGAGGCTaGGGTTTGACACTTTGTCCA +
Preference number: 4 (lower is better)
Translates to: GTWESEGSRPWRSLAQQEGLQRG*GLTLCP
Trigger: TGGACAAAGTGTCAAACCTCAGCCTCTTTGGAGGCC...CTCCTGCTGGGCAAGTGACCGCCAGGGCCGGGACCCCTCGGATTCCCAGGTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR GCA 90 bp CGTGGAGAAGACGCGTGTAGGCGGGGCCGCGGAGCACCAGCAGGCTGCGCGGTTGGGGCATTAAAAACCTaGTCCACTCTGAACGGTTCC +
Preference number: 4 (lower is better)
Translates to: RGEDACRRGRGAPAGCAVGALKT*STLNGS
Trigger: GGAACCGTTCAGAGTGGAGCAGGTTTTTAATGCCCC...AACCGCGCAGCCTGCTGGTGCTCCGCGGCCCCGCCTACACGCGTCTTCTCCACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000486389.5
CDS-3UTR CCA 90 bp CTGGGAATCCGAGGGGTCCCGGCCCTGGCGGTCACTTGCCCAGCAGGAGGCCGGGAGCTGGGTCCACTTTaGCTTTGGGGCATTAAAAAC +
Preference number: 4 (lower is better)
Translates to: LGIRGVPALAVTCPAGGRELGPL*LWGIKN
Trigger: GTTTTTAATGCCCCAAAGCCAAAGTGGACCCAGCTC...CCGGCCTCCTGCTGGGCAAGTGACCGCCAGGGCCGGGACCCCTCGGATTCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR CCA 90 bp GAGAAGACGCGTGTAGGCGGGGCCGCGGAGCACCAGCAGGCTGCGCGGTTCCAGTCCCCAGGCAGATACTaGTTCACGAGGACATGGTTA +
Preference number: 4 (lower is better)
Translates to: EKTRVGGAAEHQQAARFQSPGRY*FTRTWL
Trigger: TAACCATGTCCTCGTGAACCAGTATCTGCCTGGGGA...CTGGAACCGCGCAGCCTGCTGGTGCTCCGCGGCCCCGCCTACACGCGTCTTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
ENST00000497999.1
CDS-3UTR CCA 90 bp GGCGTCCAGCGCGTCTACGCGGGCGGCGGCGATGCCGTGGAGAAGACGCGTGTATCCCCAGGCAGATACTaGTTCACGAGGACATGGTTA +
Preference number: 4 (lower is better)
Translates to: GVQRVYAGGGDAVEKTRVSPGRY*FTRTWL
Trigger: TAACCATGTCCTCGTGAACCAGTATCTGCCTGGGGA...TACACGCGTCTTCTCCACGGCATCGCCGCCGCCCGCGTAGACGCGCTGGACGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
ENST00000497999.1
CDS-3UTR CCA 90 bp GAAGACGCGTGTAGGCGGGGCCGCGGAGCACCAGCAGGCTGCGCGGTTCCAGCATCCCCAGGCAGATACTaGTTCACGAGGACATGGTTA +
Preference number: 4 (lower is better)
Translates to: EDACRRGRGAPAGCAVPASPGRY*FTRTWL
Trigger: TAACCATGTCCTCGTGAACCAGTATCTGCCTGGGGA...TGCTGGAACCGCGCAGCCTGCTGGTGCTCCGCGGCCCCGCCTACACGCGTCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
ENST00000497999.1
CDS-3UTR CCA 90 bp TGCCCACGGTTCCTAGGTCGCGGAGTCACAGCAGCCCCAAAGGGGCAGGAACCTAAGTCCAGCACGGTGTaGGAGCCCAGGCTGATGGTG +
Preference number: 4 (lower is better)
Translates to: CPRFLGRGVTAAPKGQEPKSSTV*EPRLMV
Trigger: CACCATCAGCCTGGGCTCCCACACCGTGCTGGACTT...AGGTTCCTGCCCCTTTGGGGCTGCTGTGACTCCGCGACCTAGGAACCGTGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000252984.11
ENST00000378875.7
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR CCA 90 bp TTGCCCACGGTTCCTAGGTCGCGGAGTCACAGCAGCCCCAAAGGGGCAGGAACCAAGTCCAGCACGGTGTaGGAGCCCAGGCTGATGGTG +
Preference number: 4 (lower is better)
Translates to: LPTVPRSRSHSSPKGAGTKSSTV*EPRLMV
Trigger: CACCATCAGCCTGGGCTCCCACACCGTGCTGGACTT...GGTTCCTGCCCCTTTGGGGCTGCTGTGACTCCGCGACCTAGGAACCGTGGGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000252984.11
ENST00000378875.7
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR CCA 90 bp GGGCCGCGGAGCACCAGCAGGCTGCGCGGTTCCAGCAGTAGCGAGGTGGTGGGCATAGTAGATTACAGGTaGTGCCTCCTTCACCCTCTG +
Preference number: 4 (lower is better)
Translates to: GPRSTSRLRGSSSSEVVGIVDYR*CLLHPL
Trigger: CAGAGGGTGAAGGAGGCACCACCTGTAATCTACTAT...GCCCACCACCTCGCTACTGCTGGAACCGCGCAGCCTGCTGGTGCTCCGCGGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461668.5
CDS-3UTR CCA 90 bp CTCGTAGAAGTCCAGCACGGTGTGGGAGCCCAGGCTGATGGTGCTGACAGTCGGAGTCGGGTAGTACAGTaGTCCGTCCTCGTGGGGCCC +
Preference number: 4 (lower is better)
Translates to: LVEVQHGVGAQADGADSRSRVVQ*SVLVGP
Trigger: GGGCCCCACGAGGACGGACCACTGTACTACCCGACT...CCGACTGTCAGCACCATCAGCCTGGGCTCCCACACCGTGCTGGACTTCTACGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461668.5
CDS-3UTR TCA 90 bp TGCCGTGGAGAAGACGCGTGTAGGCGGGGCCGCGGAGCACCAGCAGGCTGCGCGCCTCTTCTTTGGAGATaGAGTCAGGGACATAGTAGA +
Preference number: 4 (lower is better)
Translates to: CRGEDACRRGRGAPAGCAPLLWR*SQGHSR
Trigger: TCTACTATGTCCCTGACTTCATCTCCAAAGAAGAGG...CGCGCAGCCTGCTGGTGCTCCGCGGCCCCGCCTACACGCGTCTTCTCCACGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000461668.5
ENST00000485128.5
ENST00000490483.5
ENST00000490986.5
ENST00000497999.1
CDS-3UTR TCA 90 bp GATGGTGCTGACAGTCGGGTAGTACAGTGGTCCGTCCTCGTGGGGCTAGGGAGTACCATCCCTCGGGGATaGGGAAGCCCACCCCAGTTC +
Preference number: 4 (lower is better)
Translates to: DGADSRVVQWSVLVGLGSTIPRG*GSPPQF
Trigger: GAACTGGGGTGGGCTTCCTCATCCCCGAGGGATGGT...ACTCCCTAGCCCCACGAGGACGGACCACTGTACTACCCGACTGTCAGCACCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000481257.5
CDS-3UTR TCA 90 bp CCAGGGGAGCCCCCTTTGCCCACGGTTCCTAGGTCGCGGAGTCACAGCAGCCCCAAAGAGGCTGAGGTTTaGCACTTTGTCCACGTAGCG +
Preference number: 4 (lower is better)
Translates to: PGEPPLPTVPRSRSHSSPKEAEV*HFVHVA
Trigger: CGCTACGTGGACAAAGTGTCAAACCTCAGCCTCTTT...GGGGCTGCTGTGACTCCGCGACCTAGGAACCGTGGGCAAAGGGGGCTCCCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000378875.7
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR TCA 90 bp AAAGGGGCAGGAACCTGGGAATCCGAGGGGTCCCGGCCCTGGCGGTCACTTGCCGGCCTCCAAAGAGGCTaGGGTTTGACACTTTGTCCA +
Preference number: 4 (lower is better)
Translates to: KGAGTWESEGSRPWRSLAGLQRG*GLTLCP
Trigger: TGGACAAAGTGTCAAACCTCAGCCTCTTTGGAGGCC...GGCAAGTGACCGCCAGGGCCGGGACCCCTCGGATTCCCAGGTTCCTGCCCCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR TCA 90 bp ACCCAGGGGAGCCCCCTTTGCCCACGGTTCCTAGGTCGCGGAGTCACAGCAGCCGGCCTCCAAAGAGGCTaGGGTTTGACACTTTGTCCA +
Preference number: 4 (lower is better)
Translates to: TQGSPLCPRFLGRGVTAAGLQRG*GLTLCP
Trigger: TGGACAAAGTGTCAAACCTCAGCCTCTTTGGAGGCC...GGCTGCTGTGACTCCGCGACCTAGGAACCGTGGGCAAAGGGGGCTCCCCTGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000378875.7
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR TCA 90 bp CAGGAACCTGGGAATCCGAGGGGTCCCGGCCCTGGCGGTCACTTGCCCAGCAGGCACTTTCAGCCCTATTaGCATCCATCTCTACCCCCA +
Preference number: 4 (lower is better)
Translates to: QEPGNPRGPGPGGHLPSRHFQPY*HPSLPP
Trigger: TGGGGGTAGAGATGGATGTCAATAGGGCTGAAAGTG...CCTGCTGGGCAAGTGACCGCCAGGGCCGGGACCCCTCGGATTCCCAGGTTCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486389.5
CDS-3UTR GCA 90 bp TTGCCCACGGTTCCTAGGTCGCGGAGTCACAGCAGCCCCAAAGGGGCAGGAACCGGGACTCTGGCGTCCTaGTCCTCCATCAACACCAAC +
Preference number: 4 (lower is better)
Translates to: LPTVPRSRSHSSPKGAGTGTLAS*SSINTN
Trigger: GTTGGTGTTGATGGAGGAGCAGGACGCCAGAGTCCC...GGTTCCTGCCCCTTTGGGGCTGCTGTGACTCCGCGACCTAGGAACCGTGGGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000252984.11
ENST00000378875.7
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490986.5
CDS-3UTR GCA 90 bp CAAAGGGGCAGGAACCTGGGAATCCGAGGGGTCCCGGCCCTGGCGGTCACTTGCGTAGATTACAGGTGGTaGCTGCTCCACTCTGAACGG +
Preference number: 4 (lower is better)
Translates to: QRGRNLGIRGVPALAVTCVDYRW*LLHSER
Trigger: CCGTTCAGAGTGGAGCAGGCACCACCTGTAATCTAC...GCAAGTGACCGCCAGGGCCGGGACCCCTCGGATTCCCAGGTTCCTGCCCCTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485128.5
ENST00000490986.5
CDS-3UTR CCA 90 bp AGGCGGGGCCGCGGAGCACCAGCAGGCTGCGCGGTTCCAGCAGTAGCGAGGTGGATAGTAGATTACAGGTaGTGCCTGCTCCACTCTGAA +
Preference number: 4 (lower is better)
Translates to: RRGRGAPAGCAVPAVARWIVDYR*CLLHSE
Trigger: TTCAGAGTGGAGCAGGCACCACCTGTAATCTACTAT...CCACCTCGCTACTGCTGGAACCGCGCAGCCTGCTGGTGCTCCGCGGCCCCGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000485128.5
ENST00000490986.5
ENST00000497999.1
CDS-3UTR CCA 90 bp CGGCGGCGATGCCGTGGAGAAGACGCGTGTAGGCGGGGCCGCGGAGCACCAGCAATAGTAGATTACAGGTaGTGCCTGCTCCACTCTGAA +
Preference number: 4 (lower is better)
Translates to: RRRCRGEDACRRGRGAPAIVDYR*CLLHSE
Trigger: TTCAGAGTGGAGCAGGCACCACCTGTAATCTACTAT...TGCTGGTGCTCCGCGGCCCCGCCTACACGCGTCTTCTCCACGGCATCGCCGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000485128.5
ENST00000490986.5
ENST00000497999.1
CDS-3UTR CCA 90 bp TGTAGGCGGGGCCGCGGAGCACCAGCAGGCTGCGCGGTTCCAGCAGTAGCGAGGGGTCCACTTTGGCTTTaGGGCATTAAAAACCTGTCG +
Preference number: 4 (lower is better)
Translates to: CRRGRGAPAGCAVPAVARGPLWL*GIKNLS
Trigger: CGACAGGTTTTTAATGCCCCAAAGCCAAAGTGGACC...CCTCGCTACTGCTGGAACCGCGCAGCCTGCTGGTGCTCCGCGGCCCCGCCTACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000461668.5
ENST00000485128.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR CCA 90 bp GGCGTCCAGCGCGTCTACGCGGGCGGCGGCGATGCCGTGGAGAAGACGCGTGTAGAGCTGGGTCCACTTTaGCTTTGGGGCATTAAAAAC +
Preference number: 4 (lower is better)
Translates to: GVQRVYAGGGDAVEKTRVELGPL*LWGIKN
Trigger: GTTTTTAATGCCCCAAAGCCAAAGTGGACCCAGCTC...TACACGCGTCTTCTCCACGGCATCGCCGCCGCCCGCGTAGACGCGCTGGACGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR CCA 90 bp GCCATGATGCCCTCCCCAGGCAGATACTGGTTCACGAGGACATGGTTAGCTGGGGTAGCGCTGGAGCCATaGGGGCAGCCGCTCAGGAAC +
Preference number: 4 (lower is better)
Translates to: AMMPSPGRYWFTRTWLAGVALEP*GQPLRN
Trigger: GTTCCTGAGCGGCTGCCCCCATGGCTCCAGCGCTAC...CCCAGCTAACCATGTCCTCGTGAACCAGTATCTGCCTGGGGAGGGCATCATGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000481257.5
CDS-3UTR CCA 90 bp AGCCCCCTTTGCCCACGGTTCCTAGGTCGCGGAGTCACAGCAGCCCCAAAGGGGGAGGACATGGTTAGCTaGGAGGCCTCCAAAGAGGCT +
Preference number: 4 (lower is better)
Translates to: SPLCPRFLGRGVTAAPKGEDMVS*EASKEA
Trigger: AGCCTCTTTGGAGGCCTCCCAGCTAACCATGTCCTC...CCCCTTTGGGGCTGCTGTGACTCCGCGACCTAGGAACCGTGGGCAAAGGGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000378875.7
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR CCA 90 bp GAGCCCCCTTTGCCCACGGTTCCTAGGTCGCGGAGTCACAGCAGCCCCAAAGGGGAGGACATGGTTAGCTaGGAGGCCTCCAAAGAGGCT +
Preference number: 4 (lower is better)
Translates to: EPPLPTVPRSRSHSSPKGEDMVS*EASKEA
Trigger: AGCCTCTTTGGAGGCCTCCCAGCTAACCATGTCCTC...CCCTTTGGGGCTGCTGTGACTCCGCGACCTAGGAACCGTGGGCAAAGGGGGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000378875.7
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR CCA 90 bp CCCACGGTTCCTAGGTCGCGGAGTCACAGCAGCCCCAAAGGGGCAGGAACCTGGTGGTTCACGAGGACATaGTTAGCTGGGAGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: PTVPRSRSHSSPKGAGTWWFTRT*LAGRPP
Trigger: TGGAGGCCTCCCAGCTAACCATGTCCTCGTGAACCA...CCAGGTTCCTGCCCCTTTGGGGCTGCTGTGACTCCGCGACCTAGGAACCGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000252984.11
ENST00000378875.7
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR CCA 90 bp CCAGGGGAGCCCCCTTTGCCCACGGTTCCTAGGTCGCGGAGTCACAGCAGCCCCTCCCCAGGCAGATACTaGTTCACGAGGACATGGTTA +
Preference number: 4 (lower is better)
Translates to: PGEPPLPTVPRSRSHSSPSPGRY*FTRTWL
Trigger: TAACCATGTCCTCGTGAACCAGTATCTGCCTGGGGA...GGGGCTGCTGTGACTCCGCGACCTAGGAACCGTGGGCAAAGGGGGCTCCCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000378875.7
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR CCA 90 bp TTGCCCACGGTTCCTAGGTCGCGGAGTCACAGCAGCCCCAAAGGGGCAGGAACCAGTCGGGTAGTACAGTaGTCCGTCCTCGTGGGGCAT +
Preference number: 4 (lower is better)
Translates to: LPTVPRSRSHSSPKGAGTSRVVQ*SVLVGH
Trigger: ATGCCCCACGAGGACGGACCACTGTACTACCCGACT...GGTTCCTGCCCCTTTGGGGCTGCTGTGACTCCGCGACCTAGGAACCGTGGGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252984.11
ENST00000378875.7
ENST00000490483.5
ENST00000490986.5
CDS-3UTR CCA 90 bp CCCACGGTTCCTAGGTCGCGGAGTCACAGCAGCCCCAAAGGGGCAGGAACCTGGACCTGGGGAAGGCAATaGGGTCCCCAGTTCTGTAAC +
Preference number: 4 (lower is better)
Translates to: PTVPRSRSHSSPKGAGTWTWGRQ*GPQFCN
Trigger: GTTACAGAACTGGGGACCCCATTGCCTTCCCCAGGT...CCAGGTTCCTGCCCCTTTGGGGCTGCTGTGACTCCGCGACCTAGGAACCGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000490483.5
CDS-3UTR TCA 90 bp GGGCACGCGGCGGATGGTCAGCGAGACCCGGGTGCCGCGCACCAGGCAGGCTCCTTGGTCTCTAAAATCTaGGTCTTCAGCATCTTACAA +
Preference number: 4 (lower is better)
Translates to: GHAADGQRDPGAAHQAGSLVSKI*VFSILQ
Trigger: TTGTAAGATGCTGAAGACTCAGATTTTAGAGACCAA...GGAGCCTGCCTGGTGCGCGGCACCCGGGTCTCGCTGACCATCCGCCGCGTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485128.5
ENST00000486389.5
CDS-3UTR TCA 90 bp CGTGGAGAAGACGCGTGTAGGCGGGGCCGCGGAGCACCAGCAGGCTGCGCGGTTCCTCTTCTTTGGAGATaGAGTCAGGGACATAGTAGA +
Preference number: 4 (lower is better)
Translates to: RGEDACRRGRGAPAGCAVPLLWR*SQGHSR
Trigger: TCTACTATGTCCCTGACTTCATCTCCAAAGAAGAGG...AACCGCGCAGCCTGCTGGTGCTCCGCGGCCCCGCCTACACGCGTCTTCTCCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000461668.5
ENST00000485128.5
ENST00000490483.5
ENST00000490986.5
ENST00000497999.1
CDS-3UTR TCA 90 bp CCACGGTTCCTAGGTCGCGGAGTCACAGCAGCCCCAAAGGGGCAGGAACCTGGGGGCCTCCAAAGAGGCTaGGGTTTGACACTTTGTCCA +
Preference number: 4 (lower is better)
Translates to: PRFLGRGVTAAPKGQEPGGLQRG*GLTLCP
Trigger: TGGACAAAGTGTCAAACCTCAGCCTCTTTGGAGGCC...CCCAGGTTCCTGCCCCTTTGGGGCTGCTGTGACTCCGCGACCTAGGAACCGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000252984.11
ENST00000378875.7
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR TCA 90 bp AACCCAGGGGAGCCCCCTTTGCCCACGGTTCCTAGGTCGCGGAGTCACAGCAGCGGCCTCCAAAGAGGCTaGGGTTTGACACTTTGTCCA +
Preference number: 4 (lower is better)
Translates to: NPGEPPLPTVPRSRSHSSGLQRG*GLTLCP
Trigger: TGGACAAAGTGTCAAACCTCAGCCTCTTTGGAGGCC...GCTGCTGTGACTCCGCGACCTAGGAACCGTGGGCAAAGGGGGCTCCCCTGGGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000378875.7
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR TCA 90 bp TCGGGTAGTACAGTGGTCCGTCCTCGTGGGGCTAGGGAGTGGGCACCAGGGCTGGGCCTCCAAAGAGGCTaGGGTTTGACACTTTGTCCA +
Preference number: 4 (lower is better)
Translates to: SGSTVVRPRGAREWAPGLGLQRG*GLTLCP
Trigger: TGGACAAAGTGTCAAACCTCAGCCTCTTTGGAGGCC...CAGCCCTGGTGCCCACTCCCTAGCCCCACGAGGACGGACCACTGTACTACCCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481257.5
CDS-3UTR GCA 90 bp AATAACCCAGGGGAGCCCCCTTTGCCCACGGTTCCTAGGTCGCGGAGTCACAGCGGGACTCTGGCGTCCTaGTCCTCCATCAACACCAAC +
Preference number: 4 (lower is better)
Translates to: NNPGEPPLPTVPRSRSHSGTLAS*SSINTN
Trigger: GTTGGTGTTGATGGAGGAGCAGGACGCCAGAGTCCC...GCTGTGACTCCGCGACCTAGGAACCGTGGGCAAAGGGGGCTCCCCTGGGTTATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000378875.7
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490986.5
CDS-3UTR GCA 90 bp CCACGGTTCCTAGGTCGCGGAGTCACAGCAGCCCCAAAGGGGCAGGAACCTGGGGTAGATTACAGGTGGTaGCTGCTCCACTCTGAACGG +
Preference number: 4 (lower is better)
Translates to: PRFLGRGVTAAPKGQEPGVDYRW*LLHSER
Trigger: CCGTTCAGAGTGGAGCAGGCACCACCTGTAATCTAC...CCCAGGTTCCTGCCCCTTTGGGGCTGCTGTGACTCCGCGACCTAGGAACCGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252984.11
ENST00000378875.7
ENST00000485128.5
ENST00000490986.5
CDS-3UTR GCA 90 bp AACCCAGGGGAGCCCCCTTTGCCCACGGTTCCTAGGTCGCGGAGTCACAGCAGCGTAGATTACAGGTGGTaGCTGCTCCACTCTGAACGG +
Preference number: 4 (lower is better)
Translates to: NPGEPPLPTVPRSRSHSSVDYRW*LLHSER
Trigger: CCGTTCAGAGTGGAGCAGGCACCACCTGTAATCTAC...GCTGCTGTGACTCCGCGACCTAGGAACCGTGGGCAAAGGGGGCTCCCCTGGGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378875.7
ENST00000485128.5
ENST00000490986.5
CDS-3UTR GCA 90 bp AGCCCCCTTTGCCCACGGTTCCTAGGTCGCGGAGTCACAGCAGCCCCAAAGGGGTCAACACCAACTCCTTaGACCCAATCCGTCCACCAG +
Preference number: 4 (lower is better)
Translates to: SPLCPRFLGRGVTAAPKGSTPTP*TQSVHQ
Trigger: CTGGTGGACGGATTGGGTGCAAGGAGTTGGTGTTGA...CCCCTTTGGGGCTGCTGTGACTCCGCGACCTAGGAACCGTGGGCAAAGGGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378875.7
ENST00000490986.5
CDS-3UTR GCA 90 bp GGGCAGCCGCTCAGGAACCATCCCTCGGGGATGAGGAAGCCCACCCCAGTTCTGTCAACACCAACTCCTTaGACCCAATCCGTCCACCAG +
Preference number: 4 (lower is better)
Translates to: GQPLRNHPSGMRKPTPVLSTPTP*TQSVHQ
Trigger: CTGGTGGACGGATTGGGTGCAAGGAGTTGGTGTTGA...CAGAACTGGGGTGGGCTTCCTCATCCCCGAGGGATGGTTCCTGAGCGGCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481257.5
CDS-3UTR CCA 90 bp TGCCCACGGTTCCTAGGTCGCGGAGTCACAGCAGCCCCAAAGGGGCAGGAACCTGAGGACATGGTTAGCTaGGAGGCCTCCAAAGAGGCT +
Preference number: 4 (lower is better)
Translates to: CPRFLGRGVTAAPKGQEPEDMVS*EASKEA
Trigger: AGCCTCTTTGGAGGCCTCCCAGCTAACCATGTCCTC...AGGTTCCTGCCCCTTTGGGGCTGCTGTGACTCCGCGACCTAGGAACCGTGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000252984.11
ENST00000378875.7
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR CCA 90 bp ATAACCCAGGGGAGCCCCCTTTGCCCACGGTTCCTAGGTCGCGGAGTCACAGCAAGTCGGGTAGTACAGTaGTCCGTCCTCGTGGGGCAT +
Preference number: 4 (lower is better)
Translates to: ITQGSPLCPRFLGRGVTASRVVQ*SVLVGH
Trigger: ATGCCCCACGAGGACGGACCACTGTACTACCCGACT...TGCTGTGACTCCGCGACCTAGGAACCGTGGGCAAAGGGGGCTCCCCTGGGTTAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000378875.7
ENST00000490483.5
ENST00000490986.5
CDS-3UTR CCA 90 bp CACGGTGTGGGAGCCCAGGCTGATGGTGCTGACAGTCGGGTAGTACAGTGGTCCAGTCGGGTAGTACAGTaGTCCGTCCTCGTGGGGCAT +
Preference number: 4 (lower is better)
Translates to: HGVGAQADGADSRVVQWSSRVVQ*SVLVGH
Trigger: ATGCCCCACGAGGACGGACCACTGTACTACCCGACT...GGACCACTGTACTACCCGACTGTCAGCACCATCAGCCTGGGCTCCCACACCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000490483.5
ENST00000490986.5
ENST00000497999.1
CDS-3UTR CCA 90 bp ATAAATAACCCAGGGGAGCCCCCTTTGCCCACGGTTCCTAGGTCGCGGAGTCACAGGGTCATCGTCCTCTaGCCGCCGCGGCTCGTAGAA +
Preference number: 4 (lower is better)
Translates to: INNPGEPPLPTVPRSRSHRVIVL*PPRLVE
Trigger: TTCTACGAGCCGCGGCGGCCAGAGGACGATGACCCT...GTGACTCCGCGACCTAGGAACCGTGGGCAAAGGGGGCTCCCCTGGGTTATTTAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000378875.7
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR TCA 90 bp TCGGGTAGTACAGTGGTCCGTCCTCGTGGGGCTAGGGAGTGGGCACCAGGGCTGAAAGAGGCTGAGGTTTaGCACTTTGTCCACGTAGCG +
Preference number: 4 (lower is better)
Translates to: SGSTVVRPRGAREWAPGLKEAEV*HFVHVA
Trigger: CGCTACGTGGACAAAGTGTCAAACCTCAGCCTCTTT...CAGCCCTGGTGCCCACTCCCTAGCCCCACGAGGACGGACCACTGTACTACCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481257.5
CDS-3UTR TCA 90 bp AATAACCCAGGGGAGCCCCCTTTGCCCACGGTTCCTAGGTCGCGGAGTCACAGCTTCTGTGCACTCCTGTaGCCCCAATCTGAGCCTCCT +
Preference number: 4 (lower is better)
Translates to: NNPGEPPLPTVPRSRSHSFCALL*PQSEPP
Trigger: AGGAGGCTCAGATTGGGGTCACAGGAGTGCACAGAA...GCTGTGACTCCGCGACCTAGGAACCGTGGGCAAAGGGGGCTCCCCTGGGTTATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000486389.5
CDS-3UTR GCA 90 bp TTGCCCACGGTTCCTAGGTCGCGGAGTCACAGCAGCCCCAAAGGGGCAGGAACCTCAACACCAACTCCTTaGACCCAATCCTCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: LPTVPRSRSHSSPKGAGTSTPTP*TQSSAL
Trigger: GAGGGCTGAGGATTGGGTGCAAGGAGTTGGTGTTGA...GGTTCCTGCCCCTTTGGGGCTGCTGTGACTCCGCGACCTAGGAACCGTGGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252984.11
ENST00000485128.5
ENST00000486389.5
CDS-3UTR GCA 90 bp GCCATGATGCCCTCCCCAGGCAGATACTGGTTCACGAGGACATGGTTAGCTGGGGGACAGGGAGGTGAATaGCATGATGCCCTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: AMMPSPGRYWFTRTWLAGGQGGE*HDALPR
Trigger: CCTGGGGAGGGCATCATGGCATTCACCTCCCTGTCC...CCCAGCTAACCATGTCCTCGTGAACCAGTATCTGCCTGGGGAGGGCATCATGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000481257.5
CDS-3UTR GCA 90 bp TGTAGGCGGGGCCGCGGAGCACCAGCAGGCTGCGCGGTTCCAGCAGTAGCGAGGATCCAACTACACATATaGCTTCTCAATCCTCCCACA +
Preference number: 4 (lower is better)
Translates to: CRRGRGAPAGCAVPAVARIQLHI*LLNPPT
Trigger: TGTGGGAGGATTGAGAAGGCATATGTGTAGTTGGAT...CCTCGCTACTGCTGGAACCGCGCAGCCTGCTGGTGCTCCGCGGCCCCGCCTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486389.5
CDS-3UTR CCA 90 bp AGTCGGGTAGTACAGTGGTCCGTCCTCGTGGGGCCCAGTTCTGTAACTTTCTCCGAACGGTTCCAGGGCTaGGACTCTGGCGTCCTGCTC +
Preference number: 4 (lower is better)
Translates to: SRVVQWSVLVGPSSVTFSERFQG*DSGVLL
Trigger: GAGCAGGACGCCAGAGTCCCAGCCCTGGAACCGTTC...GGAGAAAGTTACAGAACTGGGCCCCACGAGGACGGACCACTGTACTACCCGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461668.5
CDS-3UTR CCA 90 bp AAAGGGGCAGGAACCTGGGAATCCGAGGGGTCCCGGCCCTGGCGGTCACTTGCCGGTCCACTTTGGCTTTaGGGCATTAAAAACCTGTCG +
Preference number: 4 (lower is better)
Translates to: KGAGTWESEGSRPWRSLAGPLWL*GIKNLS
Trigger: CGACAGGTTTTTAATGCCCCAAAGCCAAAGTGGACC...GGCAAGTGACCGCCAGGGCCGGGACCCCTCGGATTCCCAGGTTCCTGCCCCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000461668.5
ENST00000485128.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR CCA 90 bp CCAAAGGGGCAGGAACCTGGGAATCCGAGGGGTCCCGGCCCTGGCGGTCACTTGGGTCCACTTTGGCTTTaGGGCATTAAAAACCTGTCG +
Preference number: 4 (lower is better)
Translates to: PKGQEPGNPRGPGPGGHLGPLWL*GIKNLS
Trigger: CGACAGGTTTTTAATGCCCCAAAGCCAAAGTGGACC...CAAGTGACCGCCAGGGCCGGGACCCCTCGGATTCCCAGGTTCCTGCCCCTTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000461668.5
ENST00000485128.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR CCA 90 bp TTGCCCACGGTTCCTAGGTCGCGGAGTCACAGCAGCCCCAAAGGGGCAGGAACCTTTCTCCCAGAGAGCTaGGTCCACTTTGGCTTTGGG +
Preference number: 4 (lower is better)
Translates to: LPTVPRSRSHSSPKGAGTFLPES*VHFGFG
Trigger: CCCAAAGCCAAAGTGGACCCAGCTCTCTGGGAGAAA...GGTTCCTGCCCCTTTGGGGCTGCTGTGACTCCGCGACCTAGGAACCGTGGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000252984.11
ENST00000378875.7
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR CCA 90 bp TGCCCACGGTTCCTAGGTCGCGGAGTCACAGCAGCCCCAAAGGGGCAGGAACCTTTTCTCCCAGAGAGCTaGGTCCACTTTGGCTTTGGG +
Preference number: 4 (lower is better)
Translates to: CPRFLGRGVTAAPKGQEPFLPES*VHFGFG
Trigger: CCCAAAGCCAAAGTGGACCCAGCTCTCTGGGAGAAA...AGGTTCCTGCCCCTTTGGGGCTGCTGTGACTCCGCGACCTAGGAACCGTGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000252984.11
ENST00000378875.7
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR CCA 90 bp ATAACCCAGGGGAGCCCCCTTTGCCCACGGTTCCTAGGTCGCGGAGTCACAGCATGGTTCACGAGGACATaGTTAGCTGGGAGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: ITQGSPLCPRFLGRGVTAWFTRT*LAGRPP
Trigger: TGGAGGCCTCCCAGCTAACCATGTCCTCGTGAACCA...TGCTGTGACTCCGCGACCTAGGAACCGTGGGCAAAGGGGGCTCCCCTGGGTTAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000378875.7
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR CCA 90 bp GGTGCTGACAGTCGGGTAGTACAGTGGTCCGTCCTCGTGGGGCATGATGCCCTCTGGTTCACGAGGACATaGTTAGCTGGGAGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: GADSRVVQWSVLVGHDALWFTRT*LAGRPP
Trigger: TGGAGGCCTCCCAGCTAACCATGTCCTCGTGAACCA...GAGGGCATCATGCCCCACGAGGACGGACCACTGTACTACCCGACTGTCAGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000490483.5
ENST00000490986.5
ENST00000497999.1
CDS-3UTR CCA 90 bp GGGCAGCCGCTCAGGAACCATCCCTCGGGGATGAGGAAGCCCACCCCAGTTCTGTCCCCAGGCAGATACTaGTTCACGAGGACATGGTTA +
Preference number: 4 (lower is better)
Translates to: GQPLRNHPSGMRKPTPVLSPGRY*FTRTWL
Trigger: TAACCATGTCCTCGTGAACCAGTATCTGCCTGGGGA...CAGAACTGGGGTGGGCTTCCTCATCCCCGAGGGATGGTTCCTGAGCGGCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000481257.5
CDS-3UTR CCA 90 bp GATGGTGCTGACAGTCGGGTAGTACAGTGGTCCGTCCTCGTGGGGCTAGGGAGTAGTCGGGTAGTACAGTaGTCCGTCCTCGTGGGGCTA +
Preference number: 4 (lower is better)
Translates to: DGADSRVVQWSVLVGLGSSRVVQ*SVLVGL
Trigger: TAGCCCCACGAGGACGGACCACTGTACTACCCGACT...ACTCCCTAGCCCCACGAGGACGGACCACTGTACTACCCGACTGTCAGCACCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481257.5
CDS-3UTR TCA 90 bp TTGCCCACGGTTCCTAGGTCGCGGAGTCACAGCAGCCCCAAAGGGGCAGGAACCAAAGAGGCTGAGGTTTaGCACTTTGTCCACGTAGCG +
Preference number: 4 (lower is better)
Translates to: LPTVPRSRSHSSPKGAGTKEAEV*HFVHVA
Trigger: CGCTACGTGGACAAAGTGTCAAACCTCAGCCTCTTT...GGTTCCTGCCCCTTTGGGGCTGCTGTGACTCCGCGACCTAGGAACCGTGGGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000252984.11
ENST00000378875.7
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR TCA 90 bp GCTGACAGTCGGGTAGTACAGTGGTCCGTCCTCGTGGGGCATGATGCCCTCCCCAAAGAGGCTGAGGTTTaGCACTTTGTCCACGTAGCG +
Preference number: 4 (lower is better)
Translates to: ADSRVVQWSVLVGHDALPKEAEV*HFVHVA
Trigger: CGCTACGTGGACAAAGTGTCAAACCTCAGCCTCTTT...GGGGAGGGCATCATGCCCCACGAGGACGGACCACTGTACTACCCGACTGTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000490483.5
ENST00000490986.5
ENST00000497999.1
CDS-3UTR GCA 90 bp GGTGCTGACAGTCGGGTAGTACAGTGGTCCGTCCTCGTGGGGCATGATGCCCTCGTAGATTACAGGTGGTaGCTGCTCCACTCTGAACGG +
Preference number: 4 (lower is better)
Translates to: GADSRVVQWSVLVGHDALVDYRW*LLHSER
Trigger: CCGTTCAGAGTGGAGCAGGCACCACCTGTAATCTAC...GAGGGCATCATGCCCCACGAGGACGGACCACTGTACTACCCGACTGTCAGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490986.5
ENST00000497999.1
CDS-3UTR CCA 90 bp TGCCCACGGTTCCTAGGTCGCGGAGTCACAGCAGCCCCAAAGGGGCAGGAACCTTCCCCAGGCAGATACTaGTTCACGAGGACATGGTTA +
Preference number: 4 (lower is better)
Translates to: CPRFLGRGVTAAPKGQEPSPGRY*FTRTWL
Trigger: TAACCATGTCCTCGTGAACCAGTATCTGCCTGGGGA...AGGTTCCTGCCCCTTTGGGGCTGCTGTGACTCCGCGACCTAGGAACCGTGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000252984.11
ENST00000378875.7
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR TCA 90 bp GTGGAGAAGACGCGTGTAGGCGGGGCCGCGGAGCACCAGCAGGCTGCGCGGTTCTTGGTCTCTAAAATCTaGGTCTTCAGCATCTTACAA +
Preference number: 4 (lower is better)
Translates to: VEKTRVGGAAEHQQAARFLVSKI*VFSILQ
Trigger: TTGTAAGATGCTGAAGACTCAGATTTTAGAGACCAA...GAACCGCGCAGCCTGCTGGTGCTCCGCGGCCCCGCCTACACGCGTCTTCTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485128.5
ENST00000486389.5
CDS-3UTR TCA 90 bp CCACGGTTCCTAGGTCGCGGAGTCACAGCAGCCCCAAAGGGGCAGGAACCTGGGCCTCTTCTTTGGAGATaGAGTCAGGGACATAGTAGA +
Preference number: 4 (lower is better)
Translates to: PRFLGRGVTAAPKGQEPGPLLWR*SQGHSR
Trigger: TCTACTATGTCCCTGACTTCATCTCCAAAGAAGAGG...CCCAGGTTCCTGCCCCTTTGGGGCTGCTGTGACTCCGCGACCTAGGAACCGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000252984.11
ENST00000378875.7
ENST00000461668.5
ENST00000485128.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR CCA 90 bp CCACGGTTCCTAGGTCGCGGAGTCACAGCAGCCCCAAAGGGGCAGGAACCTGGGATAGTAGATTACAGGTaGTGCCTGCTCCACTCTGAA +
Preference number: 4 (lower is better)
Translates to: PRFLGRGVTAAPKGQEPGIVDYR*CLLHSE
Trigger: TTCAGAGTGGAGCAGGCACCACCTGTAATCTACTAT...CCCAGGTTCCTGCCCCTTTGGGGCTGCTGTGACTCCGCGACCTAGGAACCGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252984.11
ENST00000378875.7
ENST00000485128.5
ENST00000490986.5
CDS-3UTR CCA 90 bp CCGCGGCTCGTAGAAGTCCAGCACGGTGTGGGAGCCCAGGCTGATGGTGCTGACATAGTAGATTACAGGTaGTGCCTGCTCCACTCTGAA +
Preference number: 4 (lower is better)
Translates to: PRLVEVQHGVGAQADGADIVDYR*CLLHSE
Trigger: TTCAGAGTGGAGCAGGCACCACCTGTAATCTACTAT...GTCAGCACCATCAGCCTGGGCTCCCACACCGTGCTGGACTTCTACGAGCCGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490986.5
ENST00000497999.1
CDS-3UTR CCA 90 bp TGCCCACGGTTCCTAGGTCGCGGAGTCACAGCAGCCCCAAAGGGGCAGGAACCTGGTCCACTTTGGCTTTaGGGCATTAAAAACCTGTCG +
Preference number: 4 (lower is better)
Translates to: CPRFLGRGVTAAPKGQEPGPLWL*GIKNLS
Trigger: CGACAGGTTTTTAATGCCCCAAAGCCAAAGTGGACC...AGGTTCCTGCCCCTTTGGGGCTGCTGTGACTCCGCGACCTAGGAACCGTGGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000252984.11
ENST00000378875.7
ENST00000461668.5
ENST00000485128.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR CCA 90 bp TGCCCACGGTTCCTAGGTCGCGGAGTCACAGCAGCCCCAAAGGGGCAGGAACCTGAGCTGGGTCCACTTTaGCTTTGGGGCATTAAAAAC +
Preference number: 4 (lower is better)
Translates to: CPRFLGRGVTAAPKGQEPELGPL*LWGIKN
Trigger: GTTTTTAATGCCCCAAAGCCAAAGTGGACCCAGCTC...AGGTTCCTGCCCCTTTGGGGCTGCTGTGACTCCGCGACCTAGGAACCGTGGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000252984.11
ENST00000378875.7
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR CCA 90 bp TTGCCCACGGTTCCTAGGTCGCGGAGTCACAGCAGCCCCAAAGGGGCAGGAACCGAGCTGGGTCCACTTTaGCTTTGGGGCATTAAAAAC +
Preference number: 4 (lower is better)
Translates to: LPTVPRSRSHSSPKGAGTELGPL*LWGIKN
Trigger: GTTTTTAATGCCCCAAAGCCAAAGTGGACCCAGCTC...GGTTCCTGCCCCTTTGGGGCTGCTGTGACTCCGCGACCTAGGAACCGTGGGCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000252984.11
ENST00000378875.7
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR TCA 90 bp AGGCCGAGGCTGTTCTGTAGGGTCATCGTCCTCTGGCCGCCGCGGCTCGTAGAACCTCTTCTTTGGAGATaGAGTCAGGGACATAGTAGA +
Preference number: 4 (lower is better)
Translates to: RPRLFCRVIVLWPPRLVEPLLWR*SQGHSR
Trigger: TCTACTATGTCCCTGACTTCATCTCCAAAGAAGAGG...TTCTACGAGCCGCGGCGGCCAGAGGACGATGACCCTACAGAACAGCCTCGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461668.5
ENST00000490483.5
ENST00000490986.5
ENST00000497999.1
CDS-3UTR CCA 90 bp CTTTGCCCACGGTTCCTAGGTCGCGGAGTCACAGCAGCCCCAAAGGGGCAGGAAGGTCCACTTTGGCTTTaGGGCATTAAAAACCTGTCG +
Preference number: 4 (lower is better)
Translates to: LCPRFLGRGVTAAPKGQEGPLWL*GIKNLS
Trigger: CGACAGGTTTTTAATGCCCCAAAGCCAAAGTGGACC...TTCCTGCCCCTTTGGGGCTGCTGTGACTCCGCGACCTAGGAACCGTGGGCAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000378875.7
ENST00000461668.5
ENST00000485128.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR CCA 90 bp ATAACCCAGGGGAGCCCCCTTTGCCCACGGTTCCTAGGTCGCGGAGTCACAGCAGGTCCACTTTGGCTTTaGGGCATTAAAAACCTGTCG +
Preference number: 4 (lower is better)
Translates to: ITQGSPLCPRFLGRGVTAGPLWL*GIKNLS
Trigger: CGACAGGTTTTTAATGCCCCAAAGCCAAAGTGGACC...TGCTGTGACTCCGCGACCTAGGAACCGTGGGCAAAGGGGGCTCCCCTGGGTTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000378875.7
ENST00000461668.5
ENST00000485128.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR CCA 90 bp GCCCTCCCCAGGCAGATACTGGTTCACGAGGACATGGTTAGCTGGGAGGCCTCCGAGCTGGGTCCACTTTaGCTTTGGGGCATTAAAAAC +
Preference number: 4 (lower is better)
Translates to: ALPRQILVHEDMVSWEASELGPL*LWGIKN
Trigger: GTTTTTAATGCCCCAAAGCCAAAGTGGACCCAGCTC...GGAGGCCTCCCAGCTAACCATGTCCTCGTGAACCAGTATCTGCCTGGGGAGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000481257.5
CDS-3UTR CCA 90 bp ATAAATAACCCAGGGGAGCCCCCTTTGCCCACGGTTCCTAGGTCGCGGAGTCACTTTCTCCCAGAGAGCTaGGTCCACTTTGGCTTTGGG +
Preference number: 4 (lower is better)
Translates to: INNPGEPPLPTVPRSRSHFLPES*VHFGFG
Trigger: CCCAAAGCCAAAGTGGACCCAGCTCTCTGGGAGAAA...GTGACTCCGCGACCTAGGAACCGTGGGCAAAGGGGGCTCCCCTGGGTTATTTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000378875.7
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR TCA 90 bp ATAACCCAGGGGAGCCCCCTTTGCCCACGGTTCCTAGGTCGCGGAGTCACAGCACCTCTTCTTTGGAGATaGAGTCAGGGACATAGTAGA +
Preference number: 4 (lower is better)
Translates to: ITQGSPLCPRFLGRGVTAPLLWR*SQGHSR
Trigger: TCTACTATGTCCCTGACTTCATCTCCAAAGAAGAGG...TGCTGTGACTCCGCGACCTAGGAACCGTGGGCAAAGGGGGCTCCCCTGGGTTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000378875.7
ENST00000461668.5
ENST00000485128.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR TCA 90 bp CTTTCTCCCAGAGAGCTGGGTCCACTTTGGCTTTGGGGCATTAAAAACCTGTCGCAACCTGCTCCACTCTaGACGGTTCCAGGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: LSPRELGPLWLWGIKNLSQPAPL*TVPGLG
Trigger: TCCCAGCCCTGGAACCGTTCAGAGTGGAGCAGGTTG...CGACAGGTTTTTAATGCCCCAAAGCCAAAGTGGACCCAGCTCTCTGGGAGAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000461668.5
ENST00000481257.5
CDS-3UTR CCA 90 bp ATAACCCAGGGGAGCCCCCTTTGCCCACGGTTCCTAGGTCGCGGAGTCACAGCAATAGTAGATTACAGGTaGTGCCTGCTCCACTCTGAA +
Preference number: 4 (lower is better)
Translates to: ITQGSPLCPRFLGRGVTAIVDYR*CLLHSE
Trigger: TTCAGAGTGGAGCAGGCACCACCTGTAATCTACTAT...TGCTGTGACTCCGCGACCTAGGAACCGTGGGCAAAGGGGGCTCCCCTGGGTTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378875.7
ENST00000485128.5
ENST00000490986.5
CDS-3UTR CCA 90 bp CAGGAACCATCCCTCGGGGATGAGGAAGCCCACCCCAGTTCTGTAACTTTCTCCTTTCTCCCAGAGAGCTaGGTCCACTTTGGCTTTGGG +
Preference number: 4 (lower is better)
Translates to: QEPSLGDEEAHPSSVTFSFLPES*VHFGFG
Trigger: CCCAAAGCCAAAGTGGACCCAGCTCTCTGGGAGAAA...GGAGAAAGTTACAGAACTGGGGTGGGCTTCCTCATCCCCGAGGGATGGTTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481257.5
CDS-3UTR CCA 90 bp AGCTGGGTCCACTTTGGCTTTGGGGCATTAAAAACCTGTCGAAGCAAATACTCCGAACGGTTCCAGGGCTaGGACTCTGGCGTCCTGCTC +
Preference number: 4 (lower is better)
Translates to: SWVHFGFGALKTCRSKYSERFQG*DSGVLL
Trigger: GAGCAGGACGCCAGAGTCCCAGCCCTGGAACCGTTC...GGAGTATTTGCTTCGACAGGTTTTTAATGCCCCAAAGCCAAAGTGGACCCAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000461668.5
ENST00000481257.5
CDS-3UTR CCA 90 bp AGCTGGGTCCACTTTGGCTTTGGGGCATTAAAAACCTGTCGAAGCAAATACTCCAGGGTCATCGTCCTCTaGCCGCCGCGGCTCGTAGAA +
Preference number: 4 (lower is better)
Translates to: SWVHFGFGALKTCRSKYSRVIVL*PPRLVE
Trigger: TTCTACGAGCCGCGGCGGCCAGAGGACGATGACCCT...GGAGTATTTGCTTCGACAGGTTTTTAATGCCCCAAAGCCAAAGTGGACCCAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461668.5
CDS-3UTR TCA 90 bp TTGCCCACGGTTCCTAGGTCGCGGAGTCACAGCAGCCCCAAAGGGGCAGGAACCTTGGTCTCTAAAATCTaGGTCTTCAGCATCTTACAA +
Preference number: 4 (lower is better)
Translates to: LPTVPRSRSHSSPKGAGTLVSKI*VFSILQ
Trigger: TTGTAAGATGCTGAAGACTCAGATTTTAGAGACCAA...GGTTCCTGCCCCTTTGGGGCTGCTGTGACTCCGCGACCTAGGAACCGTGGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252984.11
ENST00000485128.5
ENST00000486389.5
CDS-3UTR CCA 90 bp CTTTCTCCCAGAGAGCTGGGTCCACTTTGGCTTTGGGGCATTAAAAACCTGTCGGAGGACATGGTTAGCTaGGAGGCCTCCAAAGAGGCT +
Preference number: 4 (lower is better)
Translates to: LSPRELGPLWLWGIKNLSEDMVS*EASKEA
Trigger: AGCCTCTTTGGAGGCCTCCCAGCTAACCATGTCCTC...CGACAGGTTTTTAATGCCCCAAAGCCAAAGTGGACCCAGCTCTCTGGGAGAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481257.5
CDS-3UTR TCA 90 bp TGGGGCATTAAAAACCTGTCGAAGCAAATACTCCTCCTCTTCTTTGGAGATGAATTACAGGTGGTGCCCTaGGTTCTGACAACCTGCTCC +
Preference number: 4 (lower is better)
Translates to: WGIKNLSKQILLLFFGDELQVVP*VLTTCS
Trigger: GGAGCAGGTTGTCAGAACTCAGGGCACCACCTGTAA...TTCATCTCCAAAGAAGAGGAGGAGTATTTGCTTCGACAGGTTTTTAATGCCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481257.5
CDS-3UTR CCA 90 bp TGGGGCATTAAAAACCTGTCGAAGCAAATACTCCTCCTCTTCTTTGGAGATGAATGGTTCACGAGGACATaGTTAGCTGGGAGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: WGIKNLSKQILLLFFGDEWFTRT*LAGRPP
Trigger: TGGAGGCCTCCCAGCTAACCATGTCCTCGTGAACCA...TTCATCTCCAAAGAAGAGGAGGAGTATTTGCTTCGACAGGTTTTTAATGCCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481257.5
CDS-3UTR TCA 90 bp TGGGGCATTAAAAACCTGTCGAAGCAAATACTCCTCCTCTTCTTTGGAGATGAACCTCTTCTTTGGAGATaGAGTCAGGGACATAGTAGA +
Preference number: 4 (lower is better)
Translates to: WGIKNLSKQILLLFFGDEPLLWR*SQGHSR
Trigger: TCTACTATGTCCCTGACTTCATCTCCAAAGAAGAGG...TTCATCTCCAAAGAAGAGGAGGAGTATTTGCTTCGACAGGTTTTTAATGCCCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000461668.5
ENST00000481257.5
CDS-3UTR CAA 90 bp GGGTCCCGGCCCTGGCGGTCACTTGCCCAGCAGGAGGCCGGCGCGCAGCACGCGGGCCCTGGCGGTCACTaGCCCAGCAGGAGGCCGGCG +
Preference number: 5 (lower is better)
Translates to: GSRPWRSLAQQEAGAQHAGPGGH*PSRRPA
Trigger: CGCCGGCCTCCTGCTGGGCAAGTGACCGCCAGGGCC...CGCGTGCTGCGCGCCGGCCTCCTGCTGGGCAAGTGACCGCCAGGGCCGGGACCC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR CAA 90 bp CGCGGGCGGCGGCGATGCCGTGGAGAAGACGCGTGTAGGCGGGGCCGCGGAGCAGGCCCTGGCGGTCACTaGCCCAGCAGGAGGCCGGCG +
Preference number: 5 (lower is better)
Translates to: RGRRRCRGEDACRRGRGAGPGGH*PSRRPA
Trigger: CGCCGGCCTCCTGCTGGGCAAGTGACCGCCAGGGCC...TGCTCCGCGGCCCCGCCTACACGCGTCTTCTCCACGGCATCGCCGCCGCCCGCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR CAA 90 bp GAGGCGGCGTCCAGCGCGTCTACGCGGGCGGCGGCGATGCCGTGGAGAAGACGCGGCCCTGGCGGTCACTaGCCCAGCAGGAGGCCGGCG +
Preference number: 5 (lower is better)
Translates to: EAASSASTRAAAMPWRRRGPGGH*PSRRPA
Trigger: CGCCGGCCTCCTGCTGGGCAAGTGACCGCCAGGGCC...GCGTCTTCTCCACGGCATCGCCGCCGCCCGCGTAGACGCGCTGGACGCCGCCTC
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR CAA 90 bp GCGGGGCCGCGGAGCACCAGCAGGCTGCGCGGTTCCAGCAGTAGCGAGGTGGTGGGCCCTGGCGGTCACTaGCCCAGCAGGAGGCCGGCG +
Preference number: 5 (lower is better)
Translates to: AGPRSTSRLRGSSSSEVVGPGGH*PSRRPA
Trigger: CGCCGGCCTCCTGCTGGGCAAGTGACCGCCAGGGCC...CACCACCTCGCTACTGCTGGAACCGCGCAGCCTGCTGGTGCTCCGCGGCCCCGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR CAA 90 bp GCAGCACGCGGGGCACGCGGCGGATGGTCAGCGAGACCCGGGTGCCGCGCACCACCAGGGGAGCCCCCTTaGCCCACGGTTCCTAGGTCG +
Preference number: 5 (lower is better)
Translates to: AARGARGGWSARPGCRAPPGEPP*PTVPRS
Trigger: CGACCTAGGAACCGTGGGCAAAGGGGGCTCCCCTGG...TGGTGCGCGGCACCCGGGTCTCGCTGACCATCCGCCGCGTGCCCCGCGTGCTGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR CAA 90 bp ACGGGCAGGCTGCCGCATTGGGCGGCGAGGAGGCGGCGTCCAGCGCGTCTACGCCCAGGGGAGCCCCCTTaGCCCACGGTTCCTAGGTCG +
Preference number: 5 (lower is better)
Translates to: TGRLPHWAARRRRPARLRPGEPP*PTVPRS
Trigger: CGACCTAGGAACCGTGGGCAAAGGGGGCTCCCCTGG...GCGTAGACGCGCTGGACGCCGCCTCCTCGCCGCCCAATGCGGCAGCCTGCCCGT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR CAA 90 bp GGGCCGCGGAGCACCAGCAGGCTGCGCGGTTCCAGCAGTAGCGAGGTGGTGGGCCCAGGGGAGCCCCCTTaGCCCACGGTTCCTAGGTCG +
Preference number: 5 (lower is better)
Translates to: GPRSTSRLRGSSSSEVVGPGEPP*PTVPRS
Trigger: CGACCTAGGAACCGTGGGCAAAGGGGGCTCCCCTGG...GCCCACCACCTCGCTACTGCTGGAACCGCGCAGCCTGCTGGTGCTCCGCGGCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR CAA 90 bp AGGCGGGGCCGCGGAGCACCAGCAGGCTGCGCGGTTCCAGCAGTAGCGAGGTGGCCAGGGGAGCCCCCTTaGCCCACGGTTCCTAGGTCG +
Preference number: 5 (lower is better)
Translates to: RRGRGAPAGCAVPAVARWPGEPP*PTVPRS
Trigger: CGACCTAGGAACCGTGGGCAAAGGGGGCTCCCCTGG...CCACCTCGCTACTGCTGGAACCGCGCAGCCTGCTGGTGCTCCGCGGCCCCGCCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR CAA 90 bp GAGCCCCCTTTGCCCACGGTTCCTAGGTCGCGGAGTCACAGCAGCCCCAAAGGGGGCCCTGGCGGTCACTaGCCCAGCAGGAGGCCGGCG +
Preference number: 5 (lower is better)
Translates to: EPPLPTVPRSRSHSSPKGGPGGH*PSRRPA
Trigger: CGCCGGCCTCCTGCTGGGCAAGTGACCGCCAGGGCC...CCCTTTGGGGCTGCTGTGACTCCGCGACCTAGGAACCGTGGGCAAAGGGGGCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000378875.7
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR CAA 90 bp AGCACCAGCAGGCTGCGCGGTTCCAGCAGTAGCGAGGTGGTGGGCCGGGGCGGACCAGGGGAGCCCCCTTaGCCCACGGTTCCTAGGTCG +
Preference number: 5 (lower is better)
Translates to: STSRLRGSSSSEVVGRGGPGEPP*PTVPRS
Trigger: CGACCTAGGAACCGTGGGCAAAGGGGGCTCCCCTGG...TCCGCCCCGGCCCACCACCTCGCTACTGCTGGAACCGCGCAGCCTGCTGGTGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR CAA 90 bp TGCCCACGGTTCCTAGGTCGCGGAGTCACAGCAGCCCCAAAGGGGCAGGAACCTGGCCCTGGCGGTCACTaGCCCAGCAGGAGGCCGGCG +
Preference number: 5 (lower is better)
Translates to: CPRFLGRGVTAAPKGQEPGPGGH*PSRRPA
Trigger: CGCCGGCCTCCTGCTGGGCAAGTGACCGCCAGGGCC...AGGTTCCTGCCCCTTTGGGGCTGCTGTGACTCCGCGACCTAGGAACCGTGGGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000252984.11
ENST00000378875.7
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
CDS CCA 90 bp GGGCAGTGTCTGGGGGCCCACCTGTTCTGTAGGGTCATCGTCCTCTaGCCGCCGCGGCTCGTAGAAGTCCAGCACGGTGTGGGAGCCCAG +
Preference number: 5 (lower is better)
Translates to: GQCLGAHLFCRVIVL*PPRLVEVQHGVGAQ
Trigger: CTGGGCTCCCACACCGTGCTGGACTTCTACGAGCCGCGGCGGCCAGAGGACGATGACCCTACAGAACAGGTGGGCCCCCAGACACTGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392183.7
ENST00000468004.5
CDS-3UTR CAA 90 bp GGGGCACGCGGCGGATGGTCAGCGAGACCCGGGTGCCGCGCACCAGGCAGGCTCATCAACACCAACTCCTaGCACCCAATCCTCAGCCCT +
Preference number: 5 (lower is better)
Translates to: GARGGWSARPGCRAPGRLINTNS*HPILSP
Trigger: AGGGCTGAGGATTGGGTGCAAGGAGTTGGTGTTGAT...GAGCCTGCCTGGTGCGCGGCACCCGGGTCTCGCTGACCATCCGCCGCGTGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485128.5
ENST00000486389.5
CDS-3UTR CAA 90 bp CAGCAGGAGGCCGGCGCGCAGCACGCGGGGCACGCGGCGGATGGTCAGCGAGACATCAACACCAACTCCTaGCACCCAATCCGTCCACCA +
Preference number: 5 (lower is better)
Translates to: QQEAGAQHAGHAADGQRDINTNS*HPIRPP
Trigger: TGGTGGACGGATTGGGTGCAAGGAGTTGGTGTTGAT...GTCTCGCTGACCATCCGCCGCGTGCCCCGCGTGCTGCGCGCCGGCCTCCTGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490986.5
ENST00000497999.1
CDS-3UTR CAA 90 bp GAGCCCCCTTTGCCCACGGTTCCTAGGTCGCGGAGTCACAGCAGCCCCAAAGGGCCAGGGGAGCCCCCTTaGCCCACGGTTCCTAGGTCG +
Preference number: 5 (lower is better)
Translates to: EPPLPTVPRSRSHSSPKGPGEPP*PTVPRS
Trigger: CGACCTAGGAACCGTGGGCAAAGGGGGCTCCCCTGG...CCCTTTGGGGCTGCTGTGACTCCGCGACCTAGGAACCGTGGGCAAAGGGGGCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000378875.7
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR CAA 90 bp ATAAATAACCCAGGGGAGCCCCCTTTGCCCACGGTTCCTAGGTCGCGGAGTCACGGCCCTGGCGGTCACTaGCCCAGCAGGAGGCCGGCG +
Preference number: 5 (lower is better)
Translates to: INNPGEPPLPTVPRSRSHGPGGH*PSRRPA
Trigger: CGCCGGCCTCCTGCTGGGCAAGTGACCGCCAGGGCC...GTGACTCCGCGACCTAGGAACCGTGGGCAAAGGGGGCTCCCCTGGGTTATTTAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000378875.7
ENST00000461668.5
ENST00000485128.5
ENST00000486389.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR CAA 90 bp AGCACCAGCAGGCTGCGCGGTTCCAGCAGTAGCGAGGTGGTGGGCCGGGGCGGAATCAACACCAACTCCTaGCACCCAATCCTCAGCCCT +
Preference number: 5 (lower is better)
Translates to: STSRLRGSSSSEVVGRGGINTNS*HPILSP
Trigger: AGGGCTGAGGATTGGGTGCAAGGAGTTGGTGTTGAT...TCCGCCCCGGCCCACCACCTCGCTACTGCTGGAACCGCGCAGCCTGCTGGTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485128.5
ENST00000486389.5
CDS-3UTR CAA 90 bp AGGGGCAGGAACCTGGGAATCCGAGGGGTCCCGGCCCTGGCGGTCACTTGCCCAGCCCCTTTAAACACCTaGAGACCCCGCTTCAGACCT +
Preference number: 5 (lower is better)
Translates to: RGRNLGIRGVPALAVTCPAPLNT*RPRFRP
Trigger: AGGTCTGAAGCGGGGTCTCAAGGTGTTTAAAGGGGC...TGGGCAAGTGACCGCCAGGGCCGGGACCCCTCGGATTCCCAGGTTCCTGCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000486389.5
CDS CCA 90 bp AGGATGTGCGAGGTTGAAGTGCCTACAAGCAGCTGGGGCAGTGTCTaGGGGCCCACCTGTTCTGTAGGGTCATCGTCCTCTGGCCGCCGC +
Preference number: 5 (lower is better)
Translates to: RMCEVEVPTSSWGSV*GPTCSVGSSSSGRR
Trigger: GCGGCGGCCAGAGGACGATGACCCTACAGAACAGGTGGGCCCCCAGACACTGCCCCAGCTGCTTGTAGGCACTTCAACCTCGCACATCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392183.7
CDS-3UTR CAA 90 bp CCAGGGGAGCCCCCTTTGCCCACGGTTCCTAGGTCGCGGAGTCACAGCAGCCCCATCAACACCAACTCCTaGCACCCAATCCGTCCACCA +
Preference number: 5 (lower is better)
Translates to: PGEPPLPTVPRSRSHSSPINTNS*HPIRPP
Trigger: TGGTGGACGGATTGGGTGCAAGGAGTTGGTGTTGAT...GGGGCTGCTGTGACTCCGCGACCTAGGAACCGTGGGCAAAGGGGGCTCCCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378875.7
ENST00000490986.5
CDS GCA 90 bp GCCTGCTCCACTCTGAACGGTTCCAGGGCTGGGACTCTGGCGTCCTaGTCCTCCATCAACACCAACTCCTTGCACCCAATCCTCAGCCCT +
Preference number: 5 (lower is better)
Translates to: ACSTLNGSRAGTLAS*SSINTNSLHPILSP
Trigger: AGGGCTGAGGATTGGGTGCAAGGAGTTGGTGTTGATGGAGGAGCAGGACGCCAGAGTCCCAGCCCTGGAACCGTTCAGAGTGGAGCAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252984.11
ENST00000468004.5
ENST00000485128.5
CDS GCA 90 bp GCCTGCTCCACTCTGAACGGTTCCAGGGCTGGGACTCTGGCGTCCTaGTCCTCCATCAACACCAACTCCTTGCACCCAATCCGTCCACCA +
Preference number: 5 (lower is better)
Translates to: ACSTLNGSRAGTLAS*SSINTNSLHPIRPP
Trigger: TGGTGGACGGATTGGGTGCAAGGAGTTGGTGTTGATGGAGGAGCAGGACGCCAGAGTCCCAGCCCTGGAACCGTTCAGAGTGGAGCAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000378875.7
ENST00000392183.7
ENST00000466196.5
ENST00000470859.1
ENST00000475223.5
ENST00000490986.5
ENST00000497999.1
ENST00000590666.5
CDS-3UTR CAA 90 bp CCCACGGTTCCTAGGTCGCGGAGTCACAGCAGCCCCAAAGGGGCAGGAACCTGGATCAACACCAACTCCTaGCACCCAATCCTCAGCCCT +
Preference number: 5 (lower is better)
Translates to: PTVPRSRSHSSPKGAGTWINTNS*HPILSP
Trigger: AGGGCTGAGGATTGGGTGCAAGGAGTTGGTGTTGAT...CCAGGTTCCTGCCCCTTTGGGGCTGCTGTGACTCCGCGACCTAGGAACCGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252984.11
ENST00000485128.5
ENST00000486389.5
CDS-3UTR CAA 90 bp CCACGGTTCCTAGGTCGCGGAGTCACAGCAGCCCCAAAGGGGCAGGAACCTGGGCCACTTTCAGCCCTATaGACATCCATCTCTACCCCC +
Preference number: 5 (lower is better)
Translates to: PRFLGRGVTAAPKGQEPGPLSAL*TSISTP
Trigger: GGGGGTAGAGATGGATGTCAATAGGGCTGAAAGTGG...CCCAGGTTCCTGCCCCTTTGGGGCTGCTGTGACTCCGCGACCTAGGAACCGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486389.5
CDS GCA 90 bp CCAAGCCAGGGACAGGGAGGTGAATGCCTGTTTGGGAGATGTGGCTaGCTAATGAGTGAGGGTGGGTACAGAGTCCCCTGCCCCAGCACA +
Preference number: 5 (lower is better)
Translates to: PSQGQGGECLFGRCG*LMSEGGYRVPCPST
Trigger: TGTGCTGGGGCAGGGGACTCTGTACCCACCCTCACTCATTAGGCAGCCACATCTCCCAAACAGGCATTCACCTCCCTGTCCCTGGCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000392183.7
ENST00000466196.5
ENST00000468004.5
ENST00000471323.1
ENST00000475223.5
CDS GCA 90 bp AGGCATGTGGGACCAGGTCATCTTGGAGGATGTGCGAGGTTGAAGTaGCTACAAGCAGCTGGGGCAGTGTCTGGGGGCCCACCTGTTCTG +
Preference number: 5 (lower is better)
Translates to: RHVGPGHLGGCARLK*LQAAGAVSGGPPVL
Trigger: CAGAACAGGTGGGCCCCCAGACACTGCCCCAGCTGCTTGTAGGCACTTCAACCTCGCACATCCTCCAAGATGACCTGGTCCCACATGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392183.7
CDS GCA 90 bp AGGAGTACCCCGAAGGCATGTGGGACCAGGTCATCTTGGAGGATGTaGGAGGTTGAAGTGCCTACAAGCAGCTGGGGCAGTGTCTGGGGG +
Preference number: 5 (lower is better)
Translates to: RSTPKACGTRSSWRM*EVEVPTSSWGSVWG
Trigger: CCCCCAGACACTGCCCCAGCTGCTTGTAGGCACTTCAACCTCGCACATCCTCCAAGATGACCTGGTCCCACATGCCTTCGGGGTACTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392183.7
CDS GCA 90 bp ACCTGCTCCACTCTGAACGGTTCCAGGGCTGGGACTCTGGCGTCCTaGTCCTCCATCAACACCAACTCCTTGCACCCAATCCGTCCACCA +
Preference number: 5 (lower is better)
Translates to: TCSTLNGSRAGTLAS*SSINTNSLHPIRPP
Trigger: TGGTGGACGGATTGGGTGCAAGGAGTTGGTGTTGATGGAGGAGCAGGACGCCAGAGTCCCAGCCCTGGAACCGTTCAGAGTGGAGCAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000471323.1
ENST00000481257.5
ENST00000592353.1
CDS GCA 90 bp ACCTGCTCCACTCTGAACGGTTCCAGGGCTGGGACTCTGGCGTCCTaGTCCTCCATCAACACCAACTCCTTGCACCCAATCCTCAGCCCT +
Preference number: 5 (lower is better)
Translates to: TCSTLNGSRAGTLAS*SSINTNSLHPILSP
Trigger: AGGGCTGAGGATTGGGTGCAAGGAGTTGGTGTTGATGGAGGAGCAGGACGCCAGAGTCCCAGCCCTGGAACCGTTCAGAGTGGAGCAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486389.5
CDS CCA 90 bp GGCCGAGGGTGTGTGGTTACCATGATGCCCTCCCCAGGCAGATACTaGTTCACGAGGACATGGTTAGCTGGGAGGCCTCCAAAGAGGCTG +
Preference number: 5 (lower is better)
Translates to: GRGCVVTMMPSPGRY*FTRTWLAGRPPKRL
Trigger: CAGCCTCTTTGGAGGCCTCCCAGCTAACCATGTCCTCGTGAACCAGTATCTGCCTGGGGAGGGCATCATGGTAACCACACACCCTCGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392183.7
ENST00000466196.5
ENST00000468004.5
ENST00000471323.1
ENST00000475223.5
CDS TCA 90 bp GTAAGCAGATGGGTTGGGTGTCTGGGAGGAAGTGGGTACACCCCATaGGGGGACAAGGGAAGGTATCTGGGAGAGTGCCAGGAGTACCCC +
Preference number: 5 (lower is better)
Translates to: VSRWVGCLGGSGYTP*GDKGRYLGECQEYP
Trigger: GGGGTACTCCTGGCACTCTCCCAGATACCTTCCCTTGTCCCCTCATGGGGTGTACCCACTTCCTCCCAGACACCCAACCCATCTGCTTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392183.7
CDS CCA 90 bp GAGAGTGCCAGGAGTACCCCGAAGGCATGTGGGACCAGGTCATCTTaGAGGATGTGCGAGGTTGAAGTGCCTACAAGCAGCTGGGGCAGT +
Preference number: 5 (lower is better)
Translates to: ESARSTPKACGTRSS*RMCEVEVPTSSWGS
Trigger: ACTGCCCCAGCTGCTTGTAGGCACTTCAACCTCGCACATCCTCCAAGATGACCTGGTCCCACATGCCTTCGGGGTACTCCTGGCACTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392183.7
CDS-3UTR CAA 90 bp AATAACCCAGGGGAGCCCCCTTTGCCCACGGTTCCTAGGTCGCGGAGTCACAGCATCAACACCAACTCCTaGCACCCAATCCGTCCACCA +
Preference number: 5 (lower is better)
Translates to: NNPGEPPLPTVPRSRSHSINTNS*HPIRPP
Trigger: TGGTGGACGGATTGGGTGCAAGGAGTTGGTGTTGAT...GCTGTGACTCCGCGACCTAGGAACCGTGGGCAAAGGGGGCTCCCCTGGGTTATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378875.7
ENST00000490986.5
CDS TCA 90 bp GGATTCCACAGTGGCTGGAAGCACCCTGATCCTCTCAGGGACCCCTaGCCGTTTGGAGATAGCCACTGGGTCCTTCAGAGGTTTCCTCAC +
Preference number: 5 (lower is better)
Translates to: GFHSGWKHPDPLRDP*PFGDSHWVLQRFPH
Trigger: GTGAGGAAACCTCTGAAGGACCCAGTGGCTATCTCCAAACGGTCAGGGGTCCCTGAGAGGATCAGGGTGCTTCCAGCCACTGTGGAATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471323.1
CDS-3UTR CAA 90 bp TTGCCCACGGTTCCTAGGTCGCGGAGTCACAGCAGCCCCAAAGGGGCAGGAACCTACTCCTCCTCTTCTTaGGAGATGAAGTCAGGGACA +
Preference number: 5 (lower is better)
Translates to: LPTVPRSRSHSSPKGAGTYSSSS*EMKSGT
Trigger: TGTCCCTGACTTCATCTCCAAAGAAGAGGAGGAGTA...GGTTCCTGCCCCTTTGGGGCTGCTGTGACTCCGCGACCTAGGAACCGTGGGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000252984.11
ENST00000378875.7
ENST00000461668.5
ENST00000485128.5
ENST00000490483.5
ENST00000490986.5
CDS-3UTR CAA 90 bp TGCCCACGGTTCCTAGGTCGCGGAGTCACAGCAGCCCCAAAGGGGCAGGAACCTTACTCCTCCTCTTCTTaGGAGATGAAGTCAGGGACA +
Preference number: 5 (lower is better)
Translates to: CPRFLGRGVTAAPKGQEPYSSSS*EMKSGT
Trigger: TGTCCCTGACTTCATCTCCAAAGAAGAGGAGGAGTA...AGGTTCCTGCCCCTTTGGGGCTGCTGTGACTCCGCGACCTAGGAACCGTGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000252984.11
ENST00000378875.7
ENST00000461668.5
ENST00000485128.5
ENST00000490483.5
ENST00000490986.5
CDS GCA 90 bp GTCCCAACCCAAGAACTCAGGAATCAGCCTGCCTCCTTCACCCTCTaGACCCTGAGTTCTGACAACCTGCTCCACTCTGAACGGTTCCAG +
Preference number: 5 (lower is better)
Translates to: VPTQELRNQPASFTL*TLSSDNLLHSERFQ
Trigger: CTGGAACCGTTCAGAGTGGAGCAGGTTGTCAGAACTCAGGGTGCAGAGGGTGAAGGAGGCAGGCTGATTCCTGAGTTCTTGGGTTGGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471323.1
ENST00000592353.1
CDS-3UTR CAA 90 bp GCCATGATGCCCTCCCCAGGCAGATACTGGTTCACGAGGACATGGTTAGCTGGGATCAACACCAACTCCTaGCACCCAATCCGTCCACCA +
Preference number: 5 (lower is better)
Translates to: AMMPSPGRYWFTRTWLAGINTNS*HPIRPP
Trigger: TGGTGGACGGATTGGGTGCAAGGAGTTGGTGTTGAT...CCCAGCTAACCATGTCCTCGTGAACCAGTATCTGCCTGGGGAGGGCATCATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481257.5
CDS CCA 90 bp TGGTGCATGATGCCCTCCCCAGGCAGATACTGGTTCACGAGGACATaGTTAGCTGGGAGGCCTCCAAAGAGGCTGAGGTTTGACACTTTG +
Preference number: 5 (lower is better)
Translates to: WCMMPSPGRYWFTRT*LAGRPPKRLRFDTL
Trigger: CAAAGTGTCAAACCTCAGCCTCTTTGGAGGCCTCCCAGCTAACCATGTCCTCGTGAACCAGTATCTGCCTGGGGAGGGCATCATGCACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462793.5
ENST00000485128.5
ENST00000486389.5
CDS GCA 90 bp CCCTTCAACCCACACAGAGGACATATCATCACAGAGCAACCCCTATaGCTGGAGACAGGCTCAGGATGTCCTCAGACAGGTCAGGGTCTA +
Preference number: 5 (lower is better)
Translates to: PFNPHRGHIITEQPL*LETGSGCPQTGQGL
Trigger: TAGACCCTGACCTGTCTGAGGACATCCTGAGCCTGTCTCCAGGCATAGGGGTTGCTCTGTGATGATATGTCCTCTGTGTGGGTTGAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462793.5
ENST00000471323.1
ENST00000592353.1
CDS CCA 90 bp GTTACCATGATGCCCTCCCCAGGCAGATACTGGTTCACGAGGACATaGTTAGCTGGGAGGCCTCCAAAGAGGCTGAGGTTTGACACTTTG +
Preference number: 5 (lower is better)
Translates to: VTMMPSPGRYWFTRT*LAGRPPKRLRFDTL
Trigger: CAAAGTGTCAAACCTCAGCCTCTTTGGAGGCCTCCCAGCTAACCATGTCCTCGTGAACCAGTATCTGCCTGGGGAGGGCATCATGGTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392183.7
ENST00000466196.5
ENST00000468004.5
ENST00000471323.1
ENST00000475223.5
CDS TCA 90 bp CCCAATCCTCAGCCCTCTTCTGAAACGCACTTGGTCTCTAAAATCTaGGTCTTCAGCATCTTACAAGCCACACAGAGAGCCCCGTCCACC +
Preference number: 5 (lower is better)
Translates to: PNPQPSSETHLVSKI*VFSILQATQRAPST
Trigger: GGTGGACGGGGCTCTCTGTGTGGCTTGTAAGATGCTGAAGACTCAGATTTTAGAGACCAAGTGCGTTTCAGAAGAGGGCTGAGGATTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252984.11
ENST00000485128.5
CDS TCA 90 bp CTGTGTCTACCAGGATTTAGGAATCAGGGCTGCACAACCGTGGTCTaGGAGTTGTGGGTCTCACAATCTACTCAGAGTTCTGGGGCTGGA +
Preference number: 5 (lower is better)
Translates to: LCLPGFRNQGCTTVV*ELWVSQSTQSSGAG
Trigger: TCCAGCCCCAGAACTCTGAGTAGATTGTGAGACCCACAACTCTCAGACCACGGTTGTGCAGCCCTGATTCCTAAATCCTGGTAGACACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471323.1
CDS TCA 90 bp GAGATCTTTAGCTCTGAGGCTGACTCCCAAATCTTCTTCCCTCCCTaGACCATTCAGATCCCCGACTCCGAGCCTTTTAGGACTCCAAGC +
Preference number: 5 (lower is better)
Translates to: EIFSSEADSQIFFPP*TIQIPDSEPFRTPS
Trigger: GCTTGGAGTCCTAAAAGGCTCGGAGTCGGGGATCTGAATGGTTCAGGGAGGGAAGAAGATTTGGGAGTCAGCCTCAGAGCTAAAGATCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486389.5
CDS TCA 90 bp GCTGATGGTGCTGTCGAAGCAAATACTCCTCCTCTTCTTTGGAGATaGAGTCAGGGACATAGTAGATTACAGGTGGTGCCGTCCACCAGC +
Preference number: 5 (lower is better)
Translates to: ADGAVEANTPPLLWR*SQGHSRLQVVPSTS
Trigger: GCTGGTGGACGGCACCACCTGTAATCTACTATGTCCCTGACTTCATCTCCAAAGAAGAGGAGGAGTATTTGCTTCGACAGCACCATCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495116.6
CDS TCA 90 bp CTGAGGTCACCTGTCGAAGCAAATACTCCTCCTCTTCTTTGGAGATaGAGTCAGGGACATAGTAGATTACAGGTGGTGCCTGCTCCACTC +
Preference number: 5 (lower is better)
Translates to: LRSPVEANTPPLLWR*SQGHSRLQVVPAPL
Trigger: GAGTGGAGCAGGCACCACCTGTAATCTACTATGTCCCTGACTTCATCTCCAAAGAAGAGGAGGAGTATTTGCTTCGACAGGTGACCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470859.1
ENST00000497999.1
CDS TCA 90 bp CCCAATCCTCAGCCCTCTTCTGAAACGCACTTGGTCTCTAAAATCTaGGTCTTCAGCATCTTACAAGCCACACAGAGAGCCCCTACGTTC +
Preference number: 5 (lower is better)
Translates to: PNPQPSSETHLVSKI*VFSILQATQRAPTF
Trigger: GAACGTAGGGGCTCTCTGTGTGGCTTGTAAGATGCTGAAGACTCAGATTTTAGAGACCAAGTGCGTTTCAGAAGAGGGCTGAGGATTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486389.5
CDS CCA 90 bp CAACTACACATATGCCTTCTCAATCCTCCCACAGAGAACATTCTCTaGCCCCACACACAGGGAGCCTTTCTCAAAAGCTCTACACATAGC +
Preference number: 5 (lower is better)
Translates to: QLHICLLNPPTENIL*PHTQGAFLKSSTHS
Trigger: GCTATGTGTAGAGCTTTTGAGAAAGGCTCCCTGTGTGTGGGGCCAGAGAATGTTCTCTGTGGGAGGATTGAGAAGGCATATGTGTAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486389.5
CDS GCA 90 bp TCAGGATGTCCTCAGACAGGTCAGGGTCTAAAGTCAAGGGACCAGTaGCATTCCAGAATGGACTCTGACAGTAAGAATGAATTTGGTGGA +
Preference number: 5 (lower is better)
Translates to: SGCPQTGQGLKSRDQ*HSRMDSDSKNEFGG
Trigger: TCCACCAAATTCATTCTTACTGTCAGAGTCCATTCTGGAATGGCACTGGTCCCTTGACTTTAGACCCTGACCTGTCTGAGGACATCCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462793.5
ENST00000471323.1
ENST00000592353.1
CDS CCA 90 bp GCAACCGACTTGTTCCTATTGCCTGGGGGAGGGAGTATGCAAAGCTaGGCTATCTCAGCACAGCAAAGAAAGTACTTTGAAAATCTTCCA +
Preference number: 5 (lower is better)
Translates to: ATDLFLLPGGGSMQS*AISAQQRKYFENLP
Trigger: TGGAAGATTTTCAAAGTACTTTCTTTGCTGTGCTGAGATAGCCCAGCTTTGCATACTCCCTCCCCCAGGCAATAGGAACAAGTCGGTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471323.1
CDS TCA 90 bp CTGAGGTCACCTGTCGAAGCAAATACTCCTCCTCTTCTTTGGAGATaGAGTCAGGGACATAGTAGATTACAGGTGGTGCCTAGGATAGAA +
Preference number: 5 (lower is better)
Translates to: LRSPVEANTPPLLWR*SQGHSRLQVVPRIE
Trigger: TTCTATCCTAGGCACCACCTGTAATCTACTATGTCCCTGACTTCATCTCCAAAGAAGAGGAGGAGTATTTGCTTCGACAGGTGACCTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471323.1
CDS GCA 90 bp CTGGGCCATCTCAGCGTAGATGGTCTGTATTTGGTAACCTTATTGTaGTCTGGGTCTATGCTGGGCTATTTTAGCACAGGAAAGAGTTTA +
Preference number: 5 (lower is better)
Translates to: LGHLSVDGLYLVTLL*SGSMLGYFSTGKSL
Trigger: TAAACTCTTTCCTGTGCTAAAATAGCCCAGCATAGACCCAGAGCACAATAAGGTTACCAAATACAGACCATCTACGCTGAGATGGCCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470859.1
ENST00000471323.1
CDS CCA 90 bp GCTCTGGGTCTATGCTGGGCTATTTTAGCACAGGAAAGAGTTTACTaGGCTATCTCAGCACAGAAATCTGAATACAAAATTCTTTACTCC +
Preference number: 5 (lower is better)
Translates to: ALGLCWAILAQERVY*AISAQKSEYKILYS
Trigger: GGAGTAAAGAATTTTGTATTCAGATTTCTGTGCTGAGATAGCCCAGTAAACTCTTTCCTGTGCTAAAATAGCCCAGCATAGACCCAGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000470859.1
ENST00000471323.1
CDS TCA 90 bp TTTAGCACAGGAAAGAGTTTACTGGGCTATCTCAGCACAGAAATCTaGATACAAAATTCTTTACTCCCCAGTCTCAATGATCTGAACTGG +
Preference number: 5 (lower is better)
Translates to: FSTGKSLLGYLSTEI*IQNSLLPSLNDLNW
Trigger: CCAGTTCAGATCATTGAGACTGGGGAGTAAAGAATTTTGTATTCAGATTTCTGTGCTGAGATAGCCCAGTAAACTCTTTCCTGTGCTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000470859.1
ENST00000471323.1
CDS CCA 72 bp GCCCAGGCTGATGGTGCTGACAGTCGGGTAGTACAGTaGTCCGTCCTCGTGGGGCTAGGGAGTGGGCACCAG +
Preference number: 6 (lower is better)
Translates to: AQADGADSRVVQ*SVLVGLGSGHQ
Trigger: CTGGTGCCCACTCCCTAGCCCCACGAGGACGGACCACTGTACTACCCGACTGTCAGCACCATCAGCCTGGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392183.7
ENST00000468004.5
ENST00000471323.1
CDS TCA 72 bp AGTGGCTGGAAGCACCCTGATCCTCTCAGGGACCCCTaGCCGTTTGGAGATAGCCACTGGGTCCTTCAGAGG +
Preference number: 6 (lower is better)
Translates to: SGWKHPDPLRDP*PFGDSHWVLQR
Trigger: CCTCTGAAGGACCCAGTGGCTATCTCCAAACGGTCAGGGGTCCCTGAGAGGATCAGGGTGCTTCCAGCCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471323.1
CDS CCA 72 bp GAGGTTGAAGTGCCTACAAGCAGCTGGGGCAGTGTCTaGGGGCCCACCTGTTCTGTAGGGTCATCGTCCTCT +
Preference number: 6 (lower is better)
Translates to: EVEVPTSSWGSV*GPTCSVGSSSS
Trigger: AGAGGACGATGACCCTACAGAACAGGTGGGCCCCCAGACACTGCCCCAGCTGCTTGTAGGCACTTCAACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392183.7
CDS CAA 72 bp CATGTGGGACCAGGTCATCTTGGAGGATGTGCGAGGTaGAAGTGCCTACAAGCAGCTGGGGCAGTGTCTGGG +
Preference number: 6 (lower is better)
Translates to: HVGPGHLGGCAR*KCLQAAGAVSG
Trigger: CCCAGACACTGCCCCAGCTGCTTGTAGGCACTTCAACCTCGCACATCCTCCAAGATGACCTGGTCCCACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392183.7
CDS CAA 72 bp GGAAGCACCCTGATCCTCTCAGGGACCCCTGACCGTTaGGAGATAGCCACTGGGTCCTTCAGAGGTTTCCTC +
Preference number: 6 (lower is better)
Translates to: GSTLILSGTPDR*EIATGSFRGFL
Trigger: GAGGAAACCTCTGAAGGACCCAGTGGCTATCTCCAAACGGTCAGGGGTCCCTGAGAGGATCAGGGTGCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471323.1
CDS CAA 90 bp ACAGTGGCTGGAAGCACCCTGATCCTCTCAGGGACCCCTGACCGTTaGGAGATAGCCACTGGGTCCTTCAGAGGTTTCCTCACTTCTCCA +
Preference number: 6 (lower is better)
Translates to: TVAGSTLILSGTPDR*EIATGSFRGFLTSP
Trigger: TGGAGAAGTGAGGAAACCTCTGAAGGACCCAGTGGCTATCTCCAAACGGTCAGGGGTCCCTGAGAGGATCAGGGTGCTTCCAGCCACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471323.1
CDS TCA 72 bp TCAGGAATCAGCCTGCCTCCTTCACCCTCTGCACCCTaGGTTCTGACAACCTGCTCCACTCTGAACGGTTCC +
Preference number: 6 (lower is better)
Translates to: SGISLPPSPSAP*VLTTCSTLNGS
Trigger: GGAACCGTTCAGAGTGGAGCAGGTTGTCAGAACTCAGGGTGCAGAGGGTGAAGGAGGCAGGCTGATTCCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471323.1
ENST00000592353.1
CDS GCA 72 bp AGCCCCTTTAAACACCTTGAGACCCCGCTTCAGACCTaGAACTGTGAGCCCGGCTATCAACACTCAGCGACC +
Preference number: 6 (lower is better)
Translates to: SPFKHLETPLQT*NCEPGYQHSAT
Trigger: GGTCGCTGAGTGTTGATAGCCGGGCTCACAGTTGCAGGTCTGAAGCGGGGTCTCAAGGTGTTTAAAGGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486389.5
CDS CCA 72 bp TGTGTGGTTACCATGATGCCCTCCCCAGGCAGATACTaGTTCACGAGGACATGGTTAGCTGGGAGGCCTCCA +
Preference number: 6 (lower is better)
Translates to: CVVTMMPSPGRY*FTRTWLAGRPP
Trigger: TGGAGGCCTCCCAGCTAACCATGTCCTCGTGAACCAGTATCTGCCTGGGGAGGGCATCATGGTAACCACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392183.7
ENST00000466196.5
ENST00000468004.5
ENST00000471323.1
ENST00000475223.5
CDS CCA 72 bp AGGAGTACCCCGAAGGCATGTGGGACCAGGTCATCTTaGAGGATGTGCGAGGTTGAAGTGCCTACAAGCAGC +
Preference number: 6 (lower is better)
Translates to: RSTPKACGTRSS*RMCEVEVPTSS
Trigger: GCTGCTTGTAGGCACTTCAACCTCGCACATCCTCCAAGATGACCTGGTCCCACATGCCTTCGGGGTACTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392183.7
CDS TCA 72 bp AGATTACAGGTGGTGCCTCCTTCACCCTCTGCACCCTaGGTTCTGACAACCTGCTCCACTCTGAACGGTTCC +
Preference number: 6 (lower is better)
Translates to: RLQVVPPSPSAP*VLTTCSTLNGS
Trigger: GGAACCGTTCAGAGTGGAGCAGGTTGTCAGAACTCAGGGTGCAGAGGGTGAAGGAGGCACCACCTGTAATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461668.5
CDS CCA 72 bp AATCATGGCATGTGGGACAGACACCCTGTAAGCAGATaGGTTGGGTGTCTGGGAGGAAGTGGGTACACCCCA +
Preference number: 6 (lower is better)
Translates to: NHGMWDRHPVSR*VGCLGGSGYTP
Trigger: TGGGGTGTACCCACTTCCTCCCAGACACCCAACCCATCTGCTTACAGGGTGTCTGTCCCACATGCCATGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392183.7
CDS CAA 90 bp GGGCTCTCTGAGGACAGTTTGAGTTCTGCAACCGACTTGTTCCTATaGCCTGGGGGAGGGAGTATGCAAAGCTGGGCTATCTCAGCACAG +
Preference number: 6 (lower is better)
Translates to: GLSEDSLSSATDLFL*PGGGSMQSWAISAQ
Trigger: CTGTGCTGAGATAGCCCAGCTTTGCATACTCCCTCCCCCAGGCAATAGGAACAAGTCGGTTGCAGAACTCAAACTGTCCTCAGAGAGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471323.1
CDS TCA 72 bp GTATCCATTCAGCAGGTTGGGGCATCGGGGAGCCTGTaGAAATCATGGCATGTGGGACAGACACCCTGTAAG +
Preference number: 6 (lower is better)
Translates to: VSIQQVGASGSL*KSWHVGQTPCK
Trigger: CTTACAGGGTGTCTGTCCCACATGCCATGATTTTCACAGGCTCCCCGATGCCCCAACCTGCTGAATGGATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392183.7
CDS GCA 72 bp CAAGAACTCAGGAATCAGCCTGCCTCCTTCACCCTCTaGACCCTGAGTTCTGACAACCTGCTCCACTCTGAA +
Preference number: 6 (lower is better)
Translates to: QELRNQPASFTL*TLSSDNLLHSE
Trigger: TTCAGAGTGGAGCAGGTTGTCAGAACTCAGGGTGCAGAGGGTGAAGGAGGCAGGCTGATTCCTGAGTTCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471323.1
ENST00000592353.1
CDS CCA 72 bp TGGAAATGGGTCATCTGTGTCTGTGGGACCATTCCCTaGGGCGGTGGGTTCCTAGGATTTTGTGGTTTGCCT +
Preference number: 6 (lower is better)
Translates to: WKWVICVCGTIP*GGGFLGFCGLP
Trigger: AGGCAAACCACAAAATCCTAGGAACCCACCGCCCCAGGGAATGGTCCCACAGACACAGATGACCCATTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471323.1
CDS CAA 72 bp GGGCTCTCTGAGGACAGTTTGAGTTCTGCAACCGACTaGTTCCTATTGCCTGGGGGAGGGAGTATGCAAAGC +
Preference number: 6 (lower is better)
Translates to: GLSEDSLSSATD*FLLPGGGSMQS
Trigger: GCTTTGCATACTCCCTCCCCCAGGCAATAGGAACAAGTCGGTTGCAGAACTCAAACTGTCCTCAGAGAGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471323.1
CDS CAA 90 bp CTGATTCCTGGGCTCTCTGAGGACAGTTTGAGTTCTGCAACCGACTaGTTCCTATTGCCTGGGGGAGGGAGTATGCAAAGCTGGGCTATC +
Preference number: 6 (lower is better)
Translates to: LIPGLSEDSLSSATD*FLLPGGGSMQSWAI
Trigger: GATAGCCCAGCTTTGCATACTCCCTCCCCCAGGCAATAGGAACAAGTCGGTTGCAGAACTCAAACTGTCCTCAGAGAGCCCAGGAATCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471323.1
CDS CAA 72 bp GAGGACAGTTTGAGTTCTGCAACCGACTTGTTCCTATaGCCTGGGGGAGGGAGTATGCAAAGCTGGGCTATC +
Preference number: 6 (lower is better)
Translates to: EDSLSSATDLFL*PGGGSMQSWAI
Trigger: GATAGCCCAGCTTTGCATACTCCCTCCCCCAGGCAATAGGAACAAGTCGGTTGCAGAACTCAAACTGTCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471323.1
CDS CAA 90 bp GGGACCAGTGCCATTCCAGAATGGACTCTGACAGTAAGAATGAATTaGGTGGAAGGGGGCAGTCCCAACCCAAGAACTCAGGAATCAGCC +
Preference number: 6 (lower is better)
Translates to: GTSAIPEWTLTVRMN*VEGGSPNPRTQESA
Trigger: GGCTGATTCCTGAGTTCTTGGGTTGGGACTGCCCCCTTCCACCAAATTCATTCTTACTGTCAGAGTCCATTCTGGAATGGCACTGGTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000471323.1
ENST00000592353.1
CDS GCA 72 bp CAACCGACTTGTTCCTATTGCCTGGGGGAGGGAGTATaGAAAGCTGGGCTATCTCAGCACAGCAAAGAAAGT +
Preference number: 6 (lower is better)
Translates to: QPTCSYCLGEGV*KAGLSQHSKES
Trigger: ACTTTCTTTGCTGTGCTGAGATAGCCCAGCTTTGCATACTCCCTCCCCCAGGCAATAGGAACAAGTCGGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471323.1
CDS TCA 72 bp ATATGGGAAGAGTGGGAAAACAGACCAGTAGGGCACTaGGGTCACCTGTCGAAGCAAATACTCCTCCTCTTC +
Preference number: 6 (lower is better)
Translates to: IWEEWENRPVGH*GHLSKQILLLF
Trigger: GAAGAGGAGGAGTATTTGCTTCGACAGGTGACCTCAGTGCCCTACTGGTCTGTTTTCCCACTCTTCCCATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470859.1
ENST00000471323.1
CDS TCA 72 bp CCAGGATTTAGGAATCAGGGCTGCACAACCGTGGTCTaGGAGTTGTGGGTCTCACAATCTACTCAGAGTTCT +
Preference number: 6 (lower is better)
Translates to: PGFRNQGCTTVV*ELWVSQSTQSS
Trigger: AGAACTCTGAGTAGATTGTGAGACCCACAACTCTCAGACCACGGTTGTGCAGCCCTGATTCCTAAATCCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471323.1
CDS CCA 72 bp GTCTACCAGGATTTAGGAATCAGGGCTGCACAACCGTaGTCTGAGAGTTGTGGGTCTCACAATCTACTCAGA +
Preference number: 6 (lower is better)
Translates to: VYQDLGIRAAQP*SESCGSHNLLR
Trigger: TCTGAGTAGATTGTGAGACCCACAACTCTCAGACCACGGTTGTGCAGCCCTGATTCCTAAATCCTGGTAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471323.1
CDS CCA 72 bp ATATGCCTTCTCAATCCTCCCACAGAGAACATTCTCTaGCCCCACACACAGGGAGCCTTTCTCAAAAGCTCT +
Preference number: 6 (lower is better)
Translates to: ICLLNPPTENIL*PHTQGAFLKSS
Trigger: AGAGCTTTTGAGAAAGGCTCCCTGTGTGTGGGGCCAGAGAATGTTCTCTGTGGGAGGATTGAGAAGGCATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486389.5
CDS TCA 72 bp CAGCCCTCTTCTGAAACGCACTTGGTCTCTAAAATCTaGGTCTTCAGCATCTTACAAGCCACACAGAGAGCC +
Preference number: 6 (lower is better)
Translates to: QPSSETHLVSKI*VFSILQATQRA
Trigger: GGCTCTCTGTGTGGCTTGTAAGATGCTGAAGACTCAGATTTTAGAGACCAAGTGCGTTTCAGAAGAGGGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252984.11
ENST00000468004.5
ENST00000485128.5
ENST00000486389.5
CDS GCA 72 bp CCTCAGACAGGTCAGGGTCTAAAGTCAAGGGACCAGTaGCATTCCAGAATGGACTCTGACAGTAAGAATGAA +
Preference number: 6 (lower is better)
Translates to: PQTGQGLKSRDQ*HSRMDSDSKNE
Trigger: TTCATTCTTACTGTCAGAGTCCATTCTGGAATGGCACTGGTCCCTTGACTTTAGACCCTGACCTGTCTGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462793.5
ENST00000471323.1
ENST00000592353.1
CDS CAA 72 bp CAAAAATTCCTGATTCCTGGGCTCTCTGAGGACAGTTaGAGTTCTGCAACCGACTTGTTCCTATTGCCTGGG +
Preference number: 6 (lower is better)
Translates to: QKFLIPGLSEDS*SSATDLFLLPG
Trigger: CCCAGGCAATAGGAACAAGTCGGTTGCAGAACTCAAACTGTCCTCAGAGAGCCCAGGAATCAGGAATTTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471323.1
CDS CAA 90 bp AGACTGGGCCATCTCAGCGTAGATGGTCTGTATTTGGTAACCTTATaGTGCTCTGGGTCTATGCTGGGCTATTTTAGCACAGGAAAGAGT +
Preference number: 6 (lower is better)
Translates to: RLGHLSVDGLYLVTL*CSGSMLGYFSTGKS
Trigger: ACTCTTTCCTGTGCTAAAATAGCCCAGCATAGACCCAGAGCACAATAAGGTTACCAAATACAGACCATCTACGCTGAGATGGCCCAGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470859.1
ENST00000471323.1
CDS CCA 72 bp AAGAACAGAATGCAGACTGGGCCATCTCAGCGTAGATaGTCTGTATTTGGTAACCTTATTGTGCTCTGGGTC +
Preference number: 6 (lower is better)
Translates to: KNRMQTGPSQRR*SVFGNLIVLWV
Trigger: GACCCAGAGCACAATAAGGTTACCAAATACAGACCATCTACGCTGAGATGGCCCAGTCTGCATTCTGTTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470859.1
ENST00000471323.1
CDS CAA 90 bp ATCTCAGCCTATGTTTATAACCCCCTATTCTCTAAGCTAGCAGGATaGGGCTATCTCAGTAGAGGGAGTATGAGCTCTGTAACTTCCTTG +
Preference number: 6 (lower is better)
Translates to: ISAYVYNPLFSKLAG*GYLSRGSMSSVTSL
Trigger: CAAGGAAGTTACAGAGCTCATACTCCCTCTACTGAGATAGCCCAATCCTGCTAGCTTAGAGAATAGGGGGTTATAAACATAGGCTGAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000470859.1
ENST00000471323.1
CDS CAA 72 bp CATCTCAGCGTAGATGGTCTGTATTTGGTAACCTTATaGTGCTCTGGGTCTATGCTGGGCTATTTTAGCACA +
Preference number: 6 (lower is better)
Translates to: HLSVDGLYLVTL*CSGSMLGYFST
Trigger: TGTGCTAAAATAGCCCAGCATAGACCCAGAGCACAATAAGGTTACCAAATACAGACCATCTACGCTGAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470859.1
ENST00000471323.1
CDS CAA 90 bp GGAGTATGCAAAGCTGGGCTATCTCAGCACAGCAAAGAAAGTACTTaGAAAATCTTCCACTGCCAAGATCCTAATGATCTAGAATGGGCT +
Preference number: 6 (lower is better)
Translates to: GVCKAGLSQHSKEST*KIFHCQDPNDLEWA
Trigger: AGCCCATTCTAGATCATTAGGATCTTGGCAGTGGAAGATTTTCAAAGTACTTTCTTTGCTGTGCTGAGATAGCCCAGCTTTGCATACTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471323.1
CDS TCA 72 bp GAATACAAAATTCTTTACTCCCCAGTCTCAATGATCTaGACTGGGCTATCTCAGCCTATGTTTATAACCCCC +
Preference number: 6 (lower is better)
Translates to: EYKILYSPVSMI*TGLSQPMFITP
Trigger: GGGGGTTATAAACATAGGCTGAGATAGCCCAGTTCAGATCATTGAGACTGGGGAGTAAAGAATTTTGTATTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000470859.1
ENST00000471323.1
CDS CAA 72 bp AAAGCTGGGCTATCTCAGCACAGCAAAGAAAGTACTTaGAAAATCTTCCACTGCCAAGATCCTAATGATCTA +
Preference number: 6 (lower is better)
Translates to: KAGLSQHSKEST*KIFHCQDPNDL
Trigger: TAGATCATTAGGATCTTGGCAGTGGAAGATTTTCAAAGTACTTTCTTTGCTGTGCTGAGATAGCCCAGCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471323.1
CDS CCA 72 bp CTATGCTGGGCTATTTTAGCACAGGAAAGAGTTTACTaGGCTATCTCAGCACAGAAATCTGAATACAAAATT +
Preference number: 6 (lower is better)
Translates to: LCWAILAQERVY*AISAQKSEYKI
Trigger: AATTTTGTATTCAGATTTCTGTGCTGAGATAGCCCAGTAAACTCTTTCCTGTGCTAAAATAGCCCAGCATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000470859.1
ENST00000471323.1