RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ALKBH5 (Homo sapiens)

Ensembl gene IDs: ENSG00000091542

Ensembl transcript IDs: ENST00000399138.5, ENST00000490106.1, ENST00000541285.1

Found 248 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGCGGAGGAGGCACCAGCCCAGTCTGCAGGCCTGAGCTCTGGCCTTaGATGCATGCTGCCGGCAGACAAGATGGGGCAGGCGCCTTCCTA +
Preference number: 1 (lower is better)
Translates to: SGGGTSPVCRPELWP*MHAAGRQDGAGAFL
Trigger: TAGGAAGGCGCCTGCCCCATCTTGTCTGCCGGCAGCATGCATCCAAGGCCAGAGCTCAGGCCTGCAGACTGGGCTGGTGCCTCCTCCGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399138.5
3UTR TCA 90 bp CATGCTGCCGGCAGACAAGATGGGGCAGGCGCCTTCCTAGAAGGATaGCATGAGGATGAGGCCCAAGCTGGCCAGTGGAGAAGGGAAGGG +
Preference number: 1 (lower is better)
Translates to: HAAGRQDGAGAFLEG*HEDEAQAGQWRREG
Trigger: CCCTTCCCTTCTCCACTGGCCAGCTTGGGCCTCATCCTCATGTCATCCTTCTAGGAAGGCGCCTGCCCCATCTTGTCTGCCGGCAGCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399138.5
3UTR GCA 90 bp GGGCTGGCACTGTTTAAGCCCCTGCCCAGGCAACCTGAACAACTCTaGCGCAGGAGGAAGAAAGGGTGTTTGCATGAGCTTGCAGGGCGT +
Preference number: 1 (lower is better)
Translates to: GLALFKPLPRQPEQL*RRRKKGCLHELAGR
Trigger: ACGCCCTGCAAGCTCATGCAAACACCCTTTCTTCCTCCTGCGGCAGAGTTGTTCAGGTTGCCTGGGCAGGGGCTTAAACAGTGCCAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
3UTR TCA 90 bp GGAAGAAAGGGTGTTTGCATGAGCTTGCAGGGCGTGGATGGCAGGTaGGAAGTGGAGAACAGCAGAGCCTGTGAGGCTCCAGGAGACCTC +
Preference number: 1 (lower is better)
Translates to: GRKGVCMSLQGVDGR*EVENSRACEAPGDL
Trigger: GAGGTCTCCTGGAGCCTCACAGGCTCTGCTGTTCTCCACTTCTCACCTGCCATCCACGCCCTGCAAGCTCATGCAAACACCCTTTCTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
3UTR GCA 90 bp CAACCAGCAAAGAAGTGTGCTCTTGATAAGAGAGGTCAGGACCACTaGACTAGCCCCTCAGCAGCCCAAGGAACTGTGGACATGGCAGGC +
Preference number: 1 (lower is better)
Translates to: QPAKKCALDKRGQDH*TSPSAAQGTVDMAG
Trigger: GCCTGCCATGTCCACAGTTCCTTGGGCTGCTGAGGGGCTAGTGCAGTGGTCCTGACCTCTCTTATCAAGAGCACACTTCTTTGCTGGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
3UTR TCA 90 bp CAACCAAGTGCAGACATCAGTGAGGGAAAGGGGCGAGCAGAAGACTaGACTTTGTTTAGAACACTGCGAAGATTTACACTGAAAGCAAAA +
Preference number: 1 (lower is better)
Translates to: QPSADISEGKGRAED*TLFRTLRRFTLKAK
Trigger: TTTTGCTTTCAGTGTAAATCTTCGCAGTGTTCTAAACAAAGTTCAGTCTTCTGCTCGCCCCTTTCCCTCACTGATGTCTGCACTTGGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
3UTR-3UTR CCA 90 bp GCCTTGGATGCATGCTGCCGGCAGACAAGATGGGGCAGGCGCCTTCCTAGAAGGTGGGATGGCAGGGGCTaGCACTGTTTAAGCCCCTGC +
Preference number: 2 (lower is better)
Translates to: ALDACCRQTRWGRRLPRRWDGRG*HCLSPC
Trigger: GCAGGGGCTTAAACAGTGCCAGCCCCTGCCATCCCA...CCTTCTAGGAAGGCGCCTGCCCCATCTTGTCTGCCGGCAGCATGCATCCAAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000399138.5
3UTR-3UTR TCA 90 bp GCCTTGGATGCATGCTGCCGGCAGACAAGATGGGGCAGGCGCCTTCCTAGAAGGGAACAGCAGAGCCTGTaGGGCTCCAGGAGACCTCAA +
Preference number: 2 (lower is better)
Translates to: ALDACCRQTRWGRRLPRREQQSL*GSRRPQ
Trigger: TTGAGGTCTCCTGGAGCCTCACAGGCTCTGCTGTTC...CCTTCTAGGAAGGCGCCTGCCCCATCTTGTCTGCCGGCAGCATGCATCCAAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399138.5
3UTR-3UTR CCA 90 bp GCCTTGGATGCATGCTGCCGGCAGACAAGATGGGGCAGGCGCCTTCCTAGAAGGCTTGCAGGGCGTGGATaGCAGGTGAGAAGTGGAGAA +
Preference number: 2 (lower is better)
Translates to: ALDACCRQTRWGRRLPRRLAGRG*QVRSGE
Trigger: TTCTCCACTTCTCACCTGCCATCCACGCCCTGCAAG...CCTTCTAGGAAGGCGCCTGCCCCATCTTGTCTGCCGGCAGCATGCATCCAAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399138.5
3UTR-3UTR GCA 90 bp GCCTTGGATGCATGCTGCCGGCAGACAAGATGGGGCAGGCGCCTTCCTAGAAGGAAAAGATGGCTGCTCTaGTCCACCACCTCTACTGGC +
Preference number: 2 (lower is better)
Translates to: ALDACCRQTRWGRRLPRRKRWLL*STTSTG
Trigger: GCCAGTAGAGGTGGTGGAGCAGAGCAGCCATCTTTT...CCTTCTAGGAAGGCGCCTGCCCCATCTTGTCTGCCGGCAGCATGCATCCAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399138.5
3UTR-3UTR GCA 90 bp GCCTTGGATGCATGCTGCCGGCAGACAAGATGGGGCAGGCGCCTTCCTAGAAGGCACTGTTTAAGCCCCTaGCCAGGCAACCTGAACAAC +
Preference number: 2 (lower is better)
Translates to: ALDACCRQTRWGRRLPRRHCLSP*PGNLNN
Trigger: GTTGTTCAGGTTGCCTGGGCAGGGGCTTAAACAGTG...CCTTCTAGGAAGGCGCCTGCCCCATCTTGTCTGCCGGCAGCATGCATCCAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399138.5
3UTR-3UTR CCA 90 bp AAGAGAGGTCAGGACCACTGCACTAGCCCCTCAGCAGCCCAAGGAACTGTGGACGCCCCACTTAAAAGATaGCTGCTCTGCTCCACCACC +
Preference number: 2 (lower is better)
Translates to: KRGQDHCTSPSAAQGTVDAPLKR*LLCSTT
Trigger: GGTGGTGGAGCAGAGCAGCCATCTTTTAAGTGGGGC...GTCCACAGTTCCTTGGGCTGCTGAGGGGCTAGTGCAGTGGTCCTGACCTCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
3UTR CAA 90 bp CCCAGGCAACCTGAACAACTCTGCCGCAGGAGGAAGAAAGGGTGTTaGCATGAGCTTGCAGGGCGTGGATGGCAGGTGAGAAGTGGAGAA +
Preference number: 2 (lower is better)
Translates to: PRQPEQLCRRRKKGC*HELAGRGWQVRSGE
Trigger: TTCTCCACTTCTCACCTGCCATCCACGCCCTGCAAGCTCATGCAAACACCCTTTCTTCCTCCTGCGGCAGAGTTGTTCAGGTTGCCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
3UTR-3UTR GCA 90 bp GCCTTGGATGCATGCTGCCGGCAGACAAGATGGGGCAGGCGCCTTCCTAGAAGGCACTTAAAAGATGGCTaGTCTGCTCCACCACCTCTA +
Preference number: 2 (lower is better)
Translates to: ALDACCRQTRWGRRLPRRHLKDG*SAPPPL
Trigger: TAGAGGTGGTGGAGCAGAGCAGCCATCTTTTAAGTG...CCTTCTAGGAAGGCGCCTGCCCCATCTTGTCTGCCGGCAGCATGCATCCAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399138.5
3UTR-3UTR GCA 90 bp AAGAGAGGTCAGGACCACTGCACTAGCCCCTCAGCAGCCCAAGGAACTGTGGACCACTGTTTAAGCCCCTaGCCAGGCAACCTGAACAAC +
Preference number: 2 (lower is better)
Translates to: KRGQDHCTSPSAAQGTVDHCLSP*PGNLNN
Trigger: GTTGTTCAGGTTGCCTGGGCAGGGGCTTAAACAGTG...GTCCACAGTTCCTTGGGCTGCTGAGGGGCTAGTGCAGTGGTCCTGACCTCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
3UTR-3UTR GCA 90 bp TTTCTGCAGCCTATGAGGTCTCAGACCCGGACCTCTGTACACAAAGCCCCCAAAGCCTTGGATGCATGCTaGCGGCAGACAAGATGGGGC +
Preference number: 2 (lower is better)
Translates to: FLQPMRSQTRTSVHKAPKALDAC*RQTRWG
Trigger: GCCCCATCTTGTCTGCCGGCAGCATGCATCCAAGGC...TTTGGGGGCTTTGTGTACAGAGGTCCGGGTCTGAGACCTCATAGGCTGCAGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399138.5
3UTR-3UTR GCA 90 bp AACTCTGCCGCAGGAGGAAGAAAGGGTGTTTGCATGAGCTTGCAGGGCGTGGATAAAAGATGGCTGCTCTaGTCCACCACCTCTACTGGC +
Preference number: 2 (lower is better)
Translates to: NSAAGGRKGVCMSLQGVDKRWLL*STTSTG
Trigger: GCCAGTAGAGGTGGTGGAGCAGAGCAGCCATCTTTT...ATCCACGCCCTGCAAGCTCATGCAAACACCCTTTCTTCCTCCTGCGGCAGAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
3UTR-3UTR GCA 90 bp GCCTTGGATGCATGCTGCCGGCAGACAAGATGGGGCAGGCGCCTTCCTAGAAGGATAATCACACGCATATaGTCAAAAGGAGCAACCAGC +
Preference number: 2 (lower is better)
Translates to: ALDACCRQTRWGRRLPRRIITRI*SKGATS
Trigger: GCTGGTTGCTCCTTTTGAGCATATGCGTGTGATTAT...CCTTCTAGGAAGGCGCCTGCCCCATCTTGTCTGCCGGCAGCATGCATCCAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399138.5
3UTR-3UTR TCA 90 bp CAGCAAAGAAGTGTGCTCTTGATAAGAGAGGTCAGGACCACTGCACTAGCCCCTGAAAGGGTGTTTGCATaGGCTTGCAGGGCGTGGATG +
Preference number: 2 (lower is better)
Translates to: QQRSVLLIREVRTTALAPERVFA*ACRAWM
Trigger: CATCCACGCCCTGCAAGCTCATGCAAACACCCTTTC...AGGGGCTAGTGCAGTGGTCCTGACCTCTCTTATCAAGAGCACACTTCTTTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
3UTR-3UTR TCA 90 bp AACTCTGCCGCAGGAGGAAGAAAGGGTGTTTGCATGAGCTTGCAGGGCGTGGATGGGCGAGCAGAAGACTaGACTTTGTTTAGAACACTG +
Preference number: 2 (lower is better)
Translates to: NSAAGGRKGVCMSLQGVDGRAED*TLFRTL
Trigger: CAGTGTTCTAAACAAAGTTCAGTCTTCTGCTCGCCC...ATCCACGCCCTGCAAGCTCATGCAAACACCCTTTCTTCCTCCTGCGGCAGAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
3UTR-3UTR CCA 90 bp CAGCAAAGAAGTGTGCTCTTGATAAGAGAGGTCAGGACCACTGCACTAGCCCCTATGGCAGGTGAGAAGTaGAGAACAGCAGAGCCTGTG +
Preference number: 2 (lower is better)
Translates to: QQRSVLLIREVRTTALAPMAGEK*RTAEPV
Trigger: CACAGGCTCTGCTGTTCTCCACTTCTCACCTGCCAT...AGGGGCTAGTGCAGTGGTCCTGACCTCTCTTATCAAGAGCACACTTCTTTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
3UTR-3UTR TCA 90 bp AATAAACCCAGCCTGATACAGCCCCACTTAAAAGATGGCTGCTCTGCTCCACCAGCCTCTGTCCCCTATTaGTGCCAACAGCCTTTCCAT +
Preference number: 2 (lower is better)
Translates to: NKPSLIQPHLKDGCSAPPASVPY*CQQPFH
Trigger: ATGGAAAGGCTGTTGGCATCAATAGGGGACAGAGGC...TGGTGGAGCAGAGCAGCCATCTTTTAAGTGGGGCTGTATCAGGCTGGGTTTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
3UTR-3UTR CCA 90 bp AATAATCACACGCATATGCTCAAAAGGAGCAACCAGCAAAGAAGTGTGCTCTTGAAGGAACTGTGGACATaGCAGGCTAGTGGGCGTGGG +
Preference number: 2 (lower is better)
Translates to: NNHTHMLKRSNQQRSVLLKELWT*QASGRG
Trigger: CCCACGCCCACTAGCCTGCCATGTCCACAGTTCCTT...CAAGAGCACACTTCTTTGCTGGTTGCTCCTTTTGAGCATATGCGTGTGATTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
3UTR-3UTR TCA 90 bp GCTCAAAAGGAGCAACCAGCAAAGAAGTGTGCTCTTGATAAGAGAGGTCAGGACGGAATACCAAGAATATaGGAACCTAGGTCCTGGCCA +
Preference number: 2 (lower is better)
Translates to: AQKEQPAKKCALDKRGQDGIPRI*EPRSWP
Trigger: TGGCCAGGACCTAGGTTCTCATATTCTTGGTATTCC...GTCCTGACCTCTCTTATCAAGAGCACACTTCTTTGCTGGTTGCTCCTTTTGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
3UTR-3UTR CCA 90 bp AATAATCACACGCATATGCTCAAAAGGAGCAACCAGCAAAGAAGTGTGCTCTTGGCCCCACTTAAAAGATaGCTGCTCTGCTCCACCACC +
Preference number: 2 (lower is better)
Translates to: NNHTHMLKRSNQQRSVLLAPLKR*LLCSTT
Trigger: GGTGGTGGAGCAGAGCAGCCATCTTTTAAGTGGGGC...CAAGAGCACACTTCTTTGCTGGTTGCTCCTTTTGAGCATATGCGTGTGATTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
3UTR-3UTR CAA 90 bp AAGAGAGGTCAGGACCACTGCACTAGCCCCTCAGCAGCCCAAGGAACTGTGGACAGCCTCTGTCCCCTATaGATGCCAACAGCCTTTCCA +
Preference number: 3 (lower is better)
Translates to: KRGQDHCTSPSAAQGTVDSLCPL*MPTAFP
Trigger: TGGAAAGGCTGTTGGCATCAATAGGGGACAGAGGCT...GTCCACAGTTCCTTGGGCTGCTGAGGGGCTAGTGCAGTGGTCCTGACCTCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
3UTR GCA 72 bp CAGCCTGATACAGCCCCACTTAAAAGATGGCTGCTCTaGTCCACCACCTCTACTGGCCACTCCAGCATCAGC +
Preference number: 3 (lower is better)
Translates to: QPDTAPLKRWLL*STTSTGHSSIS
Trigger: GCTGATGCTGGAGTGGCCAGTAGAGGTGGTGGAGCAGAGCAGCCATCTTTTAAGTGGGGCTGTATCAGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
3UTR-3UTR CAA 90 bp CAGCAAAGAAGTGTGCTCTTGATAAGAGAGGTCAGGACCACTGCACTAGCCCCTGGTGTTTGCATGAGCTaGCAGGGCGTGGATGGCAGG +
Preference number: 3 (lower is better)
Translates to: QQRSVLLIREVRTTALAPGVCMS*QGVDGR
Trigger: CCTGCCATCCACGCCCTGCAAGCTCATGCAAACACC...AGGGGCTAGTGCAGTGGTCCTGACCTCTCTTATCAAGAGCACACTTCTTTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
3UTR GCA 72 bp AAACCCAGCCTGATACAGCCCCACTTAAAAGATGGCTaGTCTGCTCCACCACCTCTACTGGCCACTCCAGCA +
Preference number: 3 (lower is better)
Translates to: KPSLIQPHLKDG*SAPPPLLATPA
Trigger: TGCTGGAGTGGCCAGTAGAGGTGGTGGAGCAGAGCAGCCATCTTTTAAGTGGGGCTGTATCAGGCTGGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
3UTR TCA 72 bp CTACTGGCCACTCCAGCATCAGCCTCTGTCCCCTATTaGTGCCAACAGCCTTTCCATCCAGGAGGAATACCA +
Preference number: 3 (lower is better)
Translates to: LLATPASASVPY*CQQPFHPGGIP
Trigger: TGGTATTCCTCCTGGATGGAAAGGCTGTTGGCATCAATAGGGGACAGAGGCTGATGCTGGAGTGGCCAGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
3UTR GCA 72 bp CTGTTTAAGCCCCTGCCCAGGCAACCTGAACAACTCTaGCGCAGGAGGAAGAAAGGGTGTTTGCATGAGCTT +
Preference number: 3 (lower is better)
Translates to: LFKPLPRQPEQL*RRRKKGCLHEL
Trigger: AAGCTCATGCAAACACCCTTTCTTCCTCCTGCGGCAGAGTTGTTCAGGTTGCCTGGGCAGGGGCTTAAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
3UTR GCA 72 bp AAGAAGTGTGCTCTTGATAAGAGAGGTCAGGACCACTaGACTAGCCCCTCAGCAGCCCAAGGAACTGTGGAC +
Preference number: 3 (lower is better)
Translates to: KKCALDKRGQDH*TSPSAAQGTVD
Trigger: GTCCACAGTTCCTTGGGCTGCTGAGGGGCTAGTGCAGTGGTCCTGACCTCTCTTATCAAGAGCACACTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
3UTR-3UTR CAA 90 bp GCTCAAAAGGAGCAACCAGCAAAGAAGTGTGCTCTTGATAAGAGAGGTCAGGACAGCCTCTGTCCCCTATaGATGCCAACAGCCTTTCCA +
Preference number: 3 (lower is better)
Translates to: AQKEQPAKKCALDKRGQDSLCPL*MPTAFP
Trigger: TGGAAAGGCTGTTGGCATCAATAGGGGACAGAGGCT...GTCCTGACCTCTCTTATCAAGAGCACACTTCTTTGCTGGTTGCTCCTTTTGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
3UTR-3UTR CAA 90 bp CAAAAGGAGCAACCAGCAAAGAAGTGTGCTCTTGATAAGAGAGGTCAGGACCACAGGAAGAAAGGGTGTTaGCATGAGCTTGCAGGGCGT +
Preference number: 3 (lower is better)
Translates to: QKEQPAKKCALDKRGQDHRKKGC*HELAGR
Trigger: ACGCCCTGCAAGCTCATGCAAACACCCTTTCTTCCT...GTGGTCCTGACCTCTCTTATCAAGAGCACACTTCTTTGCTGGTTGCTCCTTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
3UTR TCA 72 bp GCAGACATCAGTGAGGGAAAGGGGCGAGCAGAAGACTaGACTTTGTTTAGAACACTGCGAAGATTTACACTG +
Preference number: 3 (lower is better)
Translates to: ADISEGKGRAED*TLFRTLRRFTL
Trigger: CAGTGTAAATCTTCGCAGTGTTCTAAACAAAGTTCAGTCTTCTGCTCGCCCCTTTCCCTCACTGATGTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
3UTR TCA 72 bp CAACAGCCTTTCCATCCAGGAGGAATACCAAGAATATaGGAACCTAGGTCCTGGCCAATTCTATTCTTCAGC +
Preference number: 3 (lower is better)
Translates to: QQPFHPGGIPRI*EPRSWPILFFS
Trigger: GCTGAAGAATAGAATTGGCCAGGACCTAGGTTCTCATATTCTTGGTATTCCTCCTGGATGGAAAGGCTGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
CDS-3UTR GCA 90 bp AAGAGAGGTCAGGACCACTGCACTAGCCCCTCAGCAGCCCAAGGAACTGTGGACCGGCGGCCTCCCGGCTaGCCGCCTTATAGTTGTCCC +
Preference number: 4 (lower is better)
Translates to: KRGQDHCTSPSAAQGTVDRRPPG*PPYSCP
Trigger: GGGACAACTATAAGGCGGGCAGCCGGGAGGCCGCCG...GTCCACAGTTCCTTGGGCTGCTGAGGGGCTAGTGCAGTGGTCCTGACCTCTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS-3UTR GCA 90 bp CCCAGCCTGATACAGCCCCACTTAAAAGATGGCTGCTCTGCTCCACCACCTCTATGGCCCCCACGACGCTaGTCTAGGGTCCTCCGGGGC +
Preference number: 4 (lower is better)
Translates to: PSLIQPHLKDGCSAPPPLWPPRR*SRVLRG
Trigger: GCCCCGGAGGACCCTAGAGCAGCGTCGTGGGGGCCA...TAGAGGTGGTGGAGCAGAGCAGCCATCTTTTAAGTGGGGCTGTATCAGGCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS-3UTR GCA 90 bp GCCTTGGATGCATGCTGCCGGCAGACAAGATGGGGCAGGCGCCTTCCTAGAAGGACACCACCTCGTCAATaGGGGCCTCGATCTTGGCGC +
Preference number: 4 (lower is better)
Translates to: ALDACCRQTRWGRRLPRRTPPRQ*GPRSWR
Trigger: GCGCCAAGATCGAGGCCCGCATTGACGAGGTGGTGT...CCTTCTAGGAAGGCGCCTGCCCCATCTTGTCTGCCGGCAGCATGCATCCAAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS-3UTR GCA 90 bp GCCTTGGATGCATGCTGCCGGCAGACAAGATGGGGCAGGCGCCTTCCTAGAAGGCATCAGGGTCTGCCTTaGGGTGGGACCGCTTGGGTT +
Preference number: 4 (lower is better)
Translates to: ALDACCRQTRWGRRLPRRHQGLP*GGTAWV
Trigger: AACCCAAGCGGTCCCACCGCAAGGCAGACCCTGATG...CCTTCTAGGAAGGCGCCTGCCCCATCTTGTCTGCCGGCAGCATGCATCCAAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS-3UTR TCA 90 bp GCCTTGGATGCATGCTGCCGGCAGACAAGATGGGGCAGGCGCCTTCCTAGAAGGAGGAGTTCTGGCCCCTaGGAGGGGCTTCTTGATGGT +
Preference number: 4 (lower is better)
Translates to: ALDACCRQTRWGRRLPRRRSSGP*EGLLDG
Trigger: ACCATCAAGAAGCCCCTCTCAGGGGCCAGAACTCCT...CCTTCTAGGAAGGCGCCTGCCCCATCTTGTCTGCCGGCAGCATGCATCCAAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS-3UTR GCA 90 bp AAGAGAGGTCAGGACCACTGCACTAGCCCCTCAGCAGCCCAAGGAACTGTGGACCCACGTGAGACACGATaGAGCCGCCGGGCTGGTAGT +
Preference number: 4 (lower is better)
Translates to: KRGQDHCTSPSAAQGTVDPRETR*SRRAGS
Trigger: ACTACCAGCCCGGCGGCTGCATCGTGTCTCACGTGG...GTCCACAGTTCCTTGGGCTGCTGAGGGGCTAGTGCAGTGGTCCTGACCTCTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS-3UTR GCA 90 bp AAGAGAGGTCAGGACCACTGCACTAGCCCCTCAGCAGCCCAAGGAACTGTGGACCCTTTCGGGCAGGGCTaGCTGCTGCCTCAGAGCAGT +
Preference number: 4 (lower is better)
Translates to: KRGQDHCTSPSAAQGTVDPFGQG*LLPQSS
Trigger: ACTGCTCTGAGGCAGCAGGCAGCCCTGCCCGAAAGG...GTCCACAGTTCCTTGGGCTGCTGAGGGGCTAGTGCAGTGGTCCTGACCTCTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
CDS-3UTR CCA 90 bp CAGCAAAGAAGTGTGCTCTTGATAAGAGAGGTCAGGACCACTGCACTAGCCCCTCCCTCCGCCGGTGTGTaGGCAGCAGCACCGAGCGCC +
Preference number: 4 (lower is better)
Translates to: QQRSVLLIREVRTTALAPPSAGV*AAAPSA
Trigger: GGCGCTCGGTGCTGCTGCCCACACACCGGCGGAGGG...AGGGGCTAGTGCAGTGGTCCTGACCTCTCTTATCAAGAGCACACTTCTTTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
CDS-3UTR CCA 90 bp AAGAAGTGTGCTCTTGATAAGAGAGGTCAGGACCACTGCACTAGCCCCTCAGCACCCTCCGCCGGTGTGTaGGCAGCAGCACCGAGCGCC +
Preference number: 4 (lower is better)
Translates to: KKCALDKRGQDHCTSPSAPSAGV*AAAPSA
Trigger: GGCGCTCGGTGCTGCTGCCCACACACCGGCGGAGGG...TGCTGAGGGGCTAGTGCAGTGGTCCTGACCTCTCTTATCAAGAGCACACTTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
CDS-3UTR TCA 90 bp CAGCAAAGAAGTGTGCTCTTGATAAGAGAGGTCAGGACCACTGCACTAGCCCCTCGAAGCCCTCGGGGATaGCGCGGTGCTCCACCAGCT +
Preference number: 4 (lower is better)
Translates to: QQRSVLLIREVRTTALAPRSPRG*RGAPPA
Trigger: AGCTGGTGGAGCACCGCGTCATCCCCGAGGGCTTCG...AGGGGCTAGTGCAGTGGTCCTGACCTCTCTTATCAAGAGCACACTTCTTTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS-3UTR TCA 90 bp AAGAGAGGTCAGGACCACTGCACTAGCCCCTCAGCAGCCCAAGGAACTGTGGACGAACAGCAGAGCCTGTaGGGCTCCAGGAGACCTCAA +
Preference number: 4 (lower is better)
Translates to: KRGQDHCTSPSAAQGTVDEQQSL*GSRRPQ
Trigger: TTGAGGTCTCCTGGAGCCTCACAGGCTCTGCTGTTC...GTCCACAGTTCCTTGGGCTGCTGAGGGGCTAGTGCAGTGGTCCTGACCTCTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
CDS-3UTR GCA 90 bp GCTCAAAAGGAGCAACCAGCAAAGAAGTGTGCTCTTGATAAGAGAGGTCAGGACCATGCCGCGGAGGGCTaGTGCGGAGACGCGGCCCGA +
Preference number: 4 (lower is better)
Translates to: AQKEQPAKKCALDKRGQDHAAEG*CGDAAR
Trigger: TCGGGCCGCGTCTCCGCAGCAGCCCTCCGCGGCATG...GTCCTGACCTCTCTTATCAAGAGCACACTTCTTTGCTGGTTGCTCCTTTTGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS-3UTR GCA 90 bp CCCAGCCTGATACAGCCCCACTTAAAAGATGGCTGCTCTGCTCCACCACCTCTACCTTTCGGGCAGGGCTaGCTGCTGCCTCAGAGCAGT +
Preference number: 4 (lower is better)
Translates to: PSLIQPHLKDGCSAPPPLPFGQG*LLPQSS
Trigger: ACTGCTCTGAGGCAGCAGGCAGCCCTGCCCGAAAGG...TAGAGGTGGTGGAGCAGAGCAGCCATCTTTTAAGTGGGGCTGTATCAGGCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
CDS-3UTR CCA 90 bp GCTCAAAAGGAGCAACCAGCAAAGAAGTGTGCTCTTGATAAGAGAGGTCAGGACGGTCCGTGTAGCCGCTaGCGGCCGCCATGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: AQKEQPAKKCALDKRGQDGPCSR*RPPWPP
Trigger: TGGGGGCCATGGCGGCCGCCAGCGGCTACACGGACC...GTCCTGACCTCTCTTATCAAGAGCACACTTCTTTGCTGGTTGCTCCTTTTGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS-3UTR CCA 90 bp AACTCTGCCGCAGGAGGAAGAAAGGGTGTTTGCATGAGCTTGCAGGGCGTGGATGTACTTGTTGCGCAGTaGGGCCCGGTCCACCGTGTG +
Preference number: 4 (lower is better)
Translates to: NSAAGGRKGVCMSLQGVDVLVAQ*GPVHRV
Trigger: CACACGGTGGACCGGGCCCCACTGCGCAACAAGTAC...ATCCACGCCCTGCAAGCTCATGCAAACACCCTTTCTTCCTCCTGCGGCAGAGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS-3UTR CCA 90 bp AAGAGAGGTCAGGACCACTGCACTAGCCCCTCAGCAGCCCAAGGAACTGTGGACCGGCAGGGAAAGCACTaGTTCCGACACCCGAATAGG +
Preference number: 4 (lower is better)
Translates to: KRGQDHCTSPSAAQGTVDRQGKH*FRHPNR
Trigger: CCTATTCGGGTGTCGGAACCAGTGCTTTCCCTGCCG...GTCCACAGTTCCTTGGGCTGCTGAGGGGCTAGTGCAGTGGTCCTGACCTCTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS-3UTR TCA 90 bp CAGCAAAGAAGTGTGCTCTTGATAAGAGAGGTCAGGACCACTGCACTAGCCCCTCGCACTCGTCCTGGCTaGAGAGGCGCATCTGGCGGA +
Preference number: 4 (lower is better)
Translates to: QQRSVLLIREVRTTALAPRTRPG*RGASGG
Trigger: TCCGCCAGATGCGCCTCTTCAGCCAGGACGAGTGCG...AGGGGCTAGTGCAGTGGTCCTGACCTCTCTTATCAAGAGCACACTTCTTTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS-3UTR TCA 90 bp AAGAGAGGTCAGGACCACTGCACTAGCCCCTCAGCAGCCCAAGGAACTGTGGACAAGTGCAGACATCAGTaGGGGAAAGGGGCGAGCAGA +
Preference number: 4 (lower is better)
Translates to: KRGQDHCTSPSAAQGTVDKCRHQ*GKGASR
Trigger: TCTGCTCGCCCCTTTCCCTCACTGATGTCTGCACTT...GTCCACAGTTCCTTGGGCTGCTGAGGGGCTAGTGCAGTGGTCCTGACCTCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
CDS-3UTR TCA 90 bp AAGAGAGGTCAGGACCACTGCACTAGCCCCTCAGCAGCCCAAGGAACTGTGGACGAAAGGGTGTTTGCATaGGCTTGCAGGGCGTGGATG +
Preference number: 4 (lower is better)
Translates to: KRGQDHCTSPSAAQGTVDERVFA*ACRAWM
Trigger: CATCCACGCCCTGCAAGCTCATGCAAACACCCTTTC...GTCCACAGTTCCTTGGGCTGCTGAGGGGCTAGTGCAGTGGTCCTGACCTCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
CDS-3UTR TCA 90 bp AACTCTGCCGCAGGAGGAAGAAAGGGTGTTTGCATGAGCTTGCAGGGCGTGGATACCCGGCCCCAGTTCTaGACCCAGATAGGAACGTCC +
Preference number: 4 (lower is better)
Translates to: NSAAGGRKGVCMSLQGVDTRPQF*TQIGTS
Trigger: GGACGTTCCTATCTGGGTTCAGAACTGGGGCCGGGT...ATCCACGCCCTGCAAGCTCATGCAAACACCCTTTCTTCCTCCTGCGGCAGAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541285.1
CDS-3UTR GCA 90 bp AAGAAGTGTGCTCTTGATAAGAGAGGTCAGGACCACTGCACTAGCCCCTCAGCAAGGAGCGGCGGGTCATaGAACGGTGGCGACAACGGG +
Preference number: 4 (lower is better)
Translates to: KKCALDKRGQDHCTSPSARSGGS*NGGDNG
Trigger: CCCGTTGTCGCCACCGTTGCATGACCCGCCGCTCCT...TGCTGAGGGGCTAGTGCAGTGGTCCTGACCTCTCTTATCAAGAGCACACTTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS-3UTR GCA 90 bp GCCTTGGATGCATGCTGCCGGCAGACAAGATGGGGCAGGCGCCTTCCTAGAAGGGTGGTAACACGGAGCTaGTCAGGGACTTTGTTTCCA +
Preference number: 4 (lower is better)
Translates to: ALDACCRQTRWGRRLPRRVVTRS*SGTLFP
Trigger: TGGAAACAAAGTCCCTGAGCAGCTCCGTGTTACCAC...CCTTCTAGGAAGGCGCCTGCCCCATCTTGTCTGCCGGCAGCATGCATCCAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS-3UTR GCA 90 bp CCCAGCCTGATACAGCCCCACTTAAAAGATGGCTGCTCTGCTCCACCACCTCTAAGAGGTCAGGACCACTaGACTAGCCCCTCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: PSLIQPHLKDGCSAPPPLRGQDH*TSPSAA
Trigger: GGCTGCTGAGGGGCTAGTGCAGTGGTCCTGACCTCT...TAGAGGTGGTGGAGCAGAGCAGCCATCTTTTAAGTGGGGCTGTATCAGGCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
CDS-3UTR GCA 90 bp CAGCAAAGAAGTGTGCTCTTGATAAGAGAGGTCAGGACCACTGCACTAGCCCCTTCAGACTGCGGGACCTaGAGCACCCGGCCCCAGTTC +
Preference number: 4 (lower is better)
Translates to: QQRSVLLIREVRTTALAPSDCGT*STRPQF
Trigger: GAACTGGGGCCGGGTGCTGCAGGTCCCGCAGTCTGA...AGGGGCTAGTGCAGTGGTCCTGACCTCTCTTATCAAGAGCACACTTCTTTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541285.1
CDS-3UTR CCA 90 bp AAGAGAGGTCAGGACCACTGCACTAGCCCCTCAGCAGCCCAAGGAACTGTGGACCTTGCAGGGCGTGGATaGCAGGTGAGAAGTGGAGAA +
Preference number: 4 (lower is better)
Translates to: KRGQDHCTSPSAAQGTVDLAGRG*QVRSGE
Trigger: TTCTCCACTTCTCACCTGCCATCCACGCCCTGCAAG...GTCCACAGTTCCTTGGGCTGCTGAGGGGCTAGTGCAGTGGTCCTGACCTCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
CDS-3UTR TCA 90 bp CAGGAGGAATACCAAGAATATGAGAACCTAGGTCCTGGCCAATTCTATTCTTCACCGAACCCCCATGCGTaGGTGGGGGACCCGGCGGGG +
Preference number: 4 (lower is better)
Translates to: QEEYQEYENLGPGQFYSSPNPHA*VGDPAG
Trigger: CCCCGCCGGGTCCCCCACTCACGCATGGGGGTTCGG...TGAAGAATAGAATTGGCCAGGACCTAGGTTCTCATATTCTTGGTATTCCTCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS-3UTR TCA 90 bp CAGCAAAGAAGTGTGCTCTTGATAAGAGAGGTCAGGACCACTGCACTAGCCCCTCTGCTCGGCGCTCCTTaGTGTCCTGAGGCCGTATGC +
Preference number: 4 (lower is better)
Translates to: QQRSVLLIREVRTTALAPLLGAP*CPEAVC
Trigger: GCATACGGCCTCAGGACATCAAGGAGCGCCGAGCAG...AGGGGCTAGTGCAGTGGTCCTGACCTCTCTTATCAAGAGCACACTTCTTTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
CDS-3UTR TCA 90 bp AACTCTGCCGCAGGAGGAAGAAAGGGTGTTTGCATGAGCTTGCAGGGCGTGGATAGTAGTTCTCAGAGCTaGAGCTACCCCTCCGCCGGT +
Preference number: 4 (lower is better)
Translates to: NSAAGGRKGVCMSLQGVDSSSQS*SYPSAG
Trigger: ACCGGCGGAGGGGTAGCTTCAGCTCTGAGAACTACT...ATCCACGCCCTGCAAGCTCATGCAAACACCCTTTCTTCCTCCTGCGGCAGAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
CDS-3UTR GCA 90 bp AATAAACCCAGCCTGATACAGCCCCACTTAAAAGATGGCTGCTCTGCTCCACCAGGCGCATCTGGCGGATaGCGCTCTTCACCTTGCGCG +
Preference number: 4 (lower is better)
Translates to: NKPSLIQPHLKDGCSAPPGASGG*RSSPCA
Trigger: CGCGCAAGGTGAAGAGCGGCATCCGCCAGATGCGCC...TGGTGGAGCAGAGCAGCCATCTTTTAAGTGGGGCTGTATCAGGCTGGGTTTATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS-3UTR GCA 90 bp CAGCAAAGAAGTGTGCTCTTGATAAGAGAGGTCAGGACCACTGCACTAGCCCCTGCCCGGTCCACCGTGTaGTCGTTGTACAGGCCCTTC +
Preference number: 4 (lower is better)
Translates to: QQRSVLLIREVRTTALAPARSTV*SLYRPF
Trigger: GAAGGGCCTGTACAACGAGCACACGGTGGACCGGGC...AGGGGCTAGTGCAGTGGTCCTGACCTCTCTTATCAAGAGCACACTTCTTTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS-3UTR GCA 90 bp TTTCTGCAGCCTATGAGGTCTCAGACCCGGACCTCTGTACACAAAGCCCCCAAATGGATCACCAGCTGGTaGACCCACTCGGGGATCTCG +
Preference number: 4 (lower is better)
Translates to: FLQPMRSQTRTSVHKAPKWITSW*THSGIS
Trigger: CGAGATCCCCGAGTGGGTGCACCAGCTGGTGATCCA...TTTGGGGGCTTTGTGTACAGAGGTCCGGGTCTGAGACCTCATAGGCTGCAGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS-3UTR GCA 90 bp AAACCCAGCCTGATACAGCCCCACTTAAAAGATGGCTGCTCTGCTCCACCACCTAGAGGTCAGGACCACTaGACTAGCCCCTCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: KPSLIQPHLKDGCSAPPPRGQDH*TSPSAA
Trigger: GGCTGCTGAGGGGCTAGTGCAGTGGTCCTGACCTCT...AGGTGGTGGAGCAGAGCAGCCATCTTTTAAGTGGGGCTGTATCAGGCTGGGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
CDS-3UTR GCA 90 bp CCCAGCCTGATACAGCCCCACTTAAAAGATGGCTGCTCTGCTCCACCACCTCTACTGGCCTTGGATGCATaGTGCCGGCAGACAAGATGG +
Preference number: 4 (lower is better)
Translates to: PSLIQPHLKDGCSAPPPLLALDA*CRQTRW
Trigger: CCATCTTGTCTGCCGGCAGCATGCATCCAAGGCCAG...TAGAGGTGGTGGAGCAGAGCAGCCATCTTTTAAGTGGGGCTGTATCAGGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS-3UTR CCA 90 bp CAGCAAAGAAGTGTGCTCTTGATAAGAGAGGTCAGGACCACTGCACTAGCCCCTTGCGGTGGGACCGCTTaGGTTTCAGAGCAGGGTCCC +
Preference number: 4 (lower is better)
Translates to: QQRSVLLIREVRTTALAPCGGTA*VSEQGP
Trigger: GGGACCCTGCTCTGAAACCCAAGCGGTCCCACCGCA...AGGGGCTAGTGCAGTGGTCCTGACCTCTCTTATCAAGAGCACACTTCTTTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
CDS-3UTR CCA 90 bp AACTCTGCCGCAGGAGGAAGAAAGGGTGTTTGCATGAGCTTGCAGGGCGTGGATAAGGAACTGTGGACATaGCAGGCTAGTGGGCGTGGG +
Preference number: 4 (lower is better)
Translates to: NSAAGGRKGVCMSLQGVDKELWT*QASGRG
Trigger: CCCACGCCCACTAGCCTGCCATGTCCACAGTTCCTT...ATCCACGCCCTGCAAGCTCATGCAAACACCCTTTCTTCCTCCTGCGGCAGAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
CDS-3UTR CCA 90 bp AAACCCAGCCTGATACAGCCCCACTTAAAAGATGGCTGCTCTGCTCCACCACCTTGCAGGCCTGAGCTCTaGCCTTGGATGCATGCTGCC +
Preference number: 4 (lower is better)
Translates to: KPSLIQPHLKDGCSAPPPCRPEL*PWMHAA
Trigger: GGCAGCATGCATCCAAGGCCAGAGCTCAGGCCTGCA...AGGTGGTGGAGCAGAGCAGCCATCTTTTAAGTGGGGCTGTATCAGGCTGGGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS-3UTR TCA 90 bp CAAAAGGAGCAACCAGCAAAGAAGTGTGCTCTTGATAAGAGAGGTCAGGACCACGGGTCCGAGTCCTCCTaGTACTTGCGCTTGGCCCCG +
Preference number: 4 (lower is better)
Translates to: QKEQPAKKCALDKRGQDHGSESS*YLRLAP
Trigger: CGGGGCCAAGCGCAAGTATCAGGAGGACTCGGACCC...GTGGTCCTGACCTCTCTTATCAAGAGCACACTTCTTTGCTGGTTGCTCCTTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS-3UTR GCA 90 bp CCCAGCCTGATACAGCCCCACTTAAAAGATGGCTGCTCTGCTCCACCACCTCTACCTGAGGATGATGACTaGTCGGCGCTCCTTGATGTC +
Preference number: 4 (lower is better)
Translates to: PSLIQPHLKDGCSAPPPLPEDDD*SALLDV
Trigger: GACATCAAGGAGCGCCGAGCAGTCATCATCCTCAGG...TAGAGGTGGTGGAGCAGAGCAGCCATCTTTTAAGTGGGGCTGTATCAGGCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
CDS-3UTR CCA 90 bp AAGAAGTGTGCTCTTGATAAGAGAGGTCAGGACCACTGCACTAGCCCCTCAGCACGGGTCATGCAACGGTaGCGACAACGGGGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: KKCALDKRGQDHCTSPSARVMQR*RQRGFF
Trigger: GAAGAAGCCCCGTTGTCGCCACCGTTGCATGACCCG...TGCTGAGGGGCTAGTGCAGTGGTCCTGACCTCTCTTATCAAGAGCACACTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS-3UTR CCA 90 bp CAGCAAAGAAGTGTGCTCTTGATAAGAGAGGTCAGGACCACTGCACTAGCCCCTCTGAAGAGGCGCATCTaGCGGATGCCGCTCTTCACC +
Preference number: 4 (lower is better)
Translates to: QQRSVLLIREVRTTALAPLKRRI*RMPLFT
Trigger: GGTGAAGAGCGGCATCCGCCAGATGCGCCTCTTCAG...AGGGGCTAGTGCAGTGGTCCTGACCTCTCTTATCAAGAGCACACTTCTTTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS-3UTR CCA 90 bp AATAAACCCAGCCTGATACAGCCCCACTTAAAAGATGGCTGCTCTGCTCCACCAAGGATCCGTGGCCTGTaGGCAGCATCAGGGTCTGCC +
Preference number: 4 (lower is better)
Translates to: NKPSLIQPHLKDGCSAPPRIRGL*AASGSA
Trigger: GGCAGACCCTGATGCTGCCCACAGGCCACGGATCCT...TGGTGGAGCAGAGCAGCCATCTTTTAAGTGGGGCTGTATCAGGCTGGGTTTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
CDS-3UTR CCA 90 bp AACTCTGCCGCAGGAGGAAGAAAGGGTGTTTGCATGAGCTTGCAGGGCGTGGATCTTGCAGGGCGTGGATaGCAGGTGAGAAGTGGAGAA +
Preference number: 4 (lower is better)
Translates to: NSAAGGRKGVCMSLQGVDLAGRG*QVRSGE
Trigger: TTCTCCACTTCTCACCTGCCATCCACGCCCTGCAAG...ATCCACGCCCTGCAAGCTCATGCAAACACCCTTTCTTCCTCCTGCGGCAGAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
CDS-3UTR CCA 90 bp AAGAAGTGTGCTCTTGATAAGAGAGGTCAGGACCACTGCACTAGCCCCTCAGCATGGGATGGCAGGGGCTaGCACTGTTTAAGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: KKCALDKRGQDHCTSPSAWDGRG*HCLSPC
Trigger: GCAGGGGCTTAAACAGTGCCAGCCCCTGCCATCCCA...TGCTGAGGGGCTAGTGCAGTGGTCCTGACCTCTCTTATCAAGAGCACACTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
CDS-3UTR TCA 90 bp AAGAGAGGTCAGGACCACTGCACTAGCCCCTCAGCAGCCCAAGGAACTGTGGACGGGCGAGCAGAAGACTaGACTTTGTTTAGAACACTG +
Preference number: 4 (lower is better)
Translates to: KRGQDHCTSPSAAQGTVDGRAED*TLFRTL
Trigger: CAGTGTTCTAAACAAAGTTCAGTCTTCTGCTCGCCC...GTCCACAGTTCCTTGGGCTGCTGAGGGGCTAGTGCAGTGGTCCTGACCTCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
CDS-3UTR TCA 90 bp CAGCAAAGAAGTGTGCTCTTGATAAGAGAGGTCAGGACCACTGCACTAGCCCCTGAACAGCAGAGCCTGTaGGGCTCCAGGAGACCTCAA +
Preference number: 4 (lower is better)
Translates to: QQRSVLLIREVRTTALAPEQQSL*GSRRPQ
Trigger: TTGAGGTCTCCTGGAGCCTCACAGGCTCTGCTGTTC...AGGGGCTAGTGCAGTGGTCCTGACCTCTCTTATCAAGAGCACACTTCTTTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
CDS-3UTR TCA 90 bp CAAAAGGAGCAACCAGCAAAGAAGTGTGCTCTTGATAAGAGAGGTCAGGACCACCCAACTCCCATACCCTaGAGCGGAGGAGGCACCAGC +
Preference number: 4 (lower is better)
Translates to: QKEQPAKKCALDKRGQDHPTPIP*SGGGTS
Trigger: GCTGGTGCCTCCTCCGCTTCAGGGTATGGGAGTTGG...GTGGTCCTGACCTCTCTTATCAAGAGCACACTTCTTTGCTGGTTGCTCCTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS-3UTR GCA 90 bp AATAATCACACGCATATGCTCAAAAGGAGCAACCAGCAAAGAAGTGTGCTCTTGAGCGCCGAACCCCCATaGGTGAGTGGGGGACCCGGC +
Preference number: 4 (lower is better)
Translates to: NNHTHMLKRSNQQRSVLLSAEPP*VSGGPG
Trigger: GCCGGGTCCCCCACTCACGCATGGGGGTTCGGCGCT...CAAGAGCACACTTCTTTGCTGGTTGCTCCTTTTGAGCATATGCGTGTGATTATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS-3UTR GCA 90 bp CAGCAAAGAAGTGTGCTCTTGATAAGAGAGGTCAGGACCACTGCACTAGCCCCTTCGGGGATGACGCGGTaGTCCACCAGCTTTTGGATC +
Preference number: 4 (lower is better)
Translates to: QQRSVLLIREVRTTALAPSGMTR*STSFWI
Trigger: GATCCAAAAGCTGGTGGAGCACCGCGTCATCCCCGA...AGGGGCTAGTGCAGTGGTCCTGACCTCTCTTATCAAGAGCACACTTCTTTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS-3UTR GCA 90 bp CAAAAGGAGCAACCAGCAAAGAAGTGTGCTCTTGATAAGAGAGGTCAGGACCACCAGTCACGCTTCCCCTaGGCACCGGCAGGGAAAGCA +
Preference number: 4 (lower is better)
Translates to: QKEQPAKKCALDKRGQDHQSRFP*APAGKA
Trigger: TGCTTTCCCTGCCGGTGCGCAGGGGAAGCGTGACTG...GTGGTCCTGACCTCTCTTATCAAGAGCACACTTCTTTGCTGGTTGCTCCTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS-3UTR GCA 90 bp CAAAAGGAGCAACCAGCAAAGAAGTGTGCTCTTGATAAGAGAGGTCAGGACCACGGCAGCATCAGGGTCTaGCTTGCGGTGGGACCGCTT +
Preference number: 4 (lower is better)
Translates to: QKEQPAKKCALDKRGQDHGSIRV*LAVGPL
Trigger: AAGCGGTCCCACCGCAAGGCAGACCCTGATGCTGCC...GTGGTCCTGACCTCTCTTATCAAGAGCACACTTCTTTGCTGGTTGCTCCTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
CDS-3UTR GCA 90 bp GCTCAAAAGGAGCAACCAGCAAAGAAGTGTGCTCTTGATAAGAGAGGTCAGGACGGCAGCATCAGGGTCTaGCTTGCGGTGGGACCGCTT +
Preference number: 4 (lower is better)
Translates to: AQKEQPAKKCALDKRGQDGSIRV*LAVGPL
Trigger: AAGCGGTCCCACCGCAAGGCAGACCCTGATGCTGCC...GTCCTGACCTCTCTTATCAAGAGCACACTTCTTTGCTGGTTGCTCCTTTTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
CDS-3UTR CCA 90 bp AAACCCAGCCTGATACAGCCCCACTTAAAAGATGGCTGCTCTGCTCCACCACCTGCTCGAAGATGTGGATaGGGTCCACGTGAGACACGA +
Preference number: 4 (lower is better)
Translates to: KPSLIQPHLKDGCSAPPPARRCG*GPRETR
Trigger: TCGTGTCTCACGTGGACCCCATCCACATCTTCGAGC...AGGTGGTGGAGCAGAGCAGCCATCTTTTAAGTGGGGCTGTATCAGGCTGGGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS-3UTR CCA 90 bp CCCAGCCTGATACAGCCCCACTTAAAAGATGGCTGCTCTGCTCCACCACCTCTAGATCTGAAGCATAGCTaGGTGGTAACACGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: PSLIQPHLKDGCSAPPPLDLKHS*VVTRSC
Trigger: GCAGCTCCGTGTTACCACCCAGCTATGCTTCAGATC...TAGAGGTGGTGGAGCAGAGCAGCCATCTTTTAAGTGGGGCTGTATCAGGCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
CDS-3UTR CCA 90 bp CAAAAGGAGCAACCAGCAAAGAAGTGTGCTCTTGATAAGAGAGGTCAGGACCACAGGATCCGTGGCCTGTaGGCAGCATCAGGGTCTGCC +
Preference number: 4 (lower is better)
Translates to: QKEQPAKKCALDKRGQDHRIRGL*AASGSA
Trigger: GGCAGACCCTGATGCTGCCCACAGGCCACGGATCCT...GTGGTCCTGACCTCTCTTATCAAGAGCACACTTCTTTGCTGGTTGCTCCTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
CDS-3UTR GCA 90 bp AACTCTGCCGCAGGAGGAAGAAAGGGTGTTTGCATGAGCTTGCAGGGCGTGGATAGGACTCGTATGACTTaGGCCAGTAGTTCTCAGAGC +
Preference number: 4 (lower is better)
Translates to: NSAAGGRKGVCMSLQGVDRTRMT*ASSSQS
Trigger: GCTCTGAGAACTACTGGCGCAAGTCATACGAGTCCT...ATCCACGCCCTGCAAGCTCATGCAAACACCCTTTCTTCCTCCTGCGGCAGAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
CDS-3UTR CCA 90 bp GCTCAAAAGGAGCAACCAGCAAAGAAGTGTGCTCTTGATAAGAGAGGTCAGGACTTGGCGCACTCGTCCTaGCTGAAGAGGCGCATCTGG +
Preference number: 4 (lower is better)
Translates to: AQKEQPAKKCALDKRGQDLAHSS*LKRRIW
Trigger: CCAGATGCGCCTCTTCAGCCAGGACGAGTGCGCCAA...GTCCTGACCTCTCTTATCAAGAGCACACTTCTTTGCTGGTTGCTCCTTTTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS-3UTR CCA 90 bp AAACCCAGCCTGATACAGCCCCACTTAAAAGATGGCTGCTCTGCTCCACCACCTGATCTGAAGCATAGCTaGGTGGTAACACGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: KPSLIQPHLKDGCSAPPPDLKHS*VVTRSC
Trigger: GCAGCTCCGTGTTACCACCCAGCTATGCTTCAGATC...AGGTGGTGGAGCAGAGCAGCCATCTTTTAAGTGGGGCTGTATCAGGCTGGGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
CDS-3UTR CCA 90 bp CAAAAGGAGCAACCAGCAAAGAAGTGTGCTCTTGATAAGAGAGGTCAGGACCACGGGTCTGCCTTGCGGTaGGACCGCTTGGGTTTCAGA +
Preference number: 4 (lower is better)
Translates to: QKEQPAKKCALDKRGQDHGSALR*DRLGFR
Trigger: TCTGAAACCCAAGCGGTCCCACCGCAAGGCAGACCC...GTGGTCCTGACCTCTCTTATCAAGAGCACACTTCTTTGCTGGTTGCTCCTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
CDS-3UTR CCA 90 bp CAGCAAAGAAGTGTGCTCTTGATAAGAGAGGTCAGGACCACTGCACTAGCCCCTGCCCCACTTAAAAGATaGCTGCTCTGCTCCACCACC +
Preference number: 4 (lower is better)
Translates to: QQRSVLLIREVRTTALAPAPLKR*LLCSTT
Trigger: GGTGGTGGAGCAGAGCAGCCATCTTTTAAGTGGGGC...AGGGGCTAGTGCAGTGGTCCTGACCTCTCTTATCAAGAGCACACTTCTTTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
CDS-3UTR CCA 90 bp TTTCTGCAGCCTATGAGGTCTCAGACCCGGACCTCTGTACACAAAGCCCCCAAAATGGCAGGTGAGAAGTaGAGAACAGCAGAGCCTGTG +
Preference number: 4 (lower is better)
Translates to: FLQPMRSQTRTSVHKAPKMAGEK*RTAEPV
Trigger: CACAGGCTCTGCTGTTCTCCACTTCTCACCTGCCAT...TTTGGGGGCTTTGTGTACAGAGGTCCGGGTCTGAGACCTCATAGGCTGCAGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS-3UTR CCA 90 bp CCCAGCCTGATACAGCCCCACTTAAAAGATGGCTGCTCTGCTCCACCACCTCTAACAATAGCTTTGGGATaGCAGGGGCTGGCACTGTTT +
Preference number: 4 (lower is better)
Translates to: PSLIQPHLKDGCSAPPPLTIALG*QGLALF
Trigger: AAACAGTGCCAGCCCCTGCCATCCCAAAGCTATTGT...TAGAGGTGGTGGAGCAGAGCAGCCATCTTTTAAGTGGGGCTGTATCAGGCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
CDS-3UTR CCA 90 bp AATAAACCCAGCCTGATACAGCCCCACTTAAAAGATGGCTGCTCTGCTCCACCACAGCCCAAGGAACTGTaGACATGGCAGGCTAGTGGG +
Preference number: 4 (lower is better)
Translates to: NKPSLIQPHLKDGCSAPPQPKEL*TWQASG
Trigger: CCCACTAGCCTGCCATGTCCACAGTTCCTTGGGCTG...TGGTGGAGCAGAGCAGCCATCTTTTAAGTGGGGCTGTATCAGGCTGGGTTTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
CDS-3UTR TCA 90 bp AATAATCACACGCATATGCTCAAAAGGAGCAACCAGCAAAGAAGTGTGCTCTTGTGGATGGGGTCCACGTaGGACACGATGCAGCCGCCG +
Preference number: 4 (lower is better)
Translates to: NNHTHMLKRSNQQRSVLLWMGST*DTMQPP
Trigger: CGGCGGCTGCATCGTGTCTCACGTGGACCCCATCCA...CAAGAGCACACTTCTTTGCTGGTTGCTCCTTTTGAGCATATGCGTGTGATTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS-3UTR TCA 90 bp AATAAACCCAGCCTGATACAGCCCCACTTAAAAGATGGCTGCTCTGCTCCACCAAAGTGCAGACATCAGTaGGGGAAAGGGGCGAGCAGA +
Preference number: 4 (lower is better)
Translates to: NKPSLIQPHLKDGCSAPPKCRHQ*GKGASR
Trigger: TCTGCTCGCCCCTTTCCCTCACTGATGTCTGCACTT...TGGTGGAGCAGAGCAGCCATCTTTTAAGTGGGGCTGTATCAGGCTGGGTTTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
CDS-3UTR GCA 90 bp AAACCCAGCCTGATACAGCCCCACTTAAAAGATGGCTGCTCTGCTCCACCACCTAGGACTCGTATGACTTaGGCCAGTAGTTCTCAGAGC +
Preference number: 4 (lower is better)
Translates to: KPSLIQPHLKDGCSAPPPRTRMT*ASSSQS
Trigger: GCTCTGAGAACTACTGGCGCAAGTCATACGAGTCCT...AGGTGGTGGAGCAGAGCAGCCATCTTTTAAGTGGGGCTGTATCAGGCTGGGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
CDS-3UTR GCA 90 bp CAGCAAAGAAGTGTGCTCTTGATAAGAGAGGTCAGGACCACTGCACTAGCCCCTGGAAGAAAGGGTGTTTaGATGAGCTTGCAGGGCGTG +
Preference number: 4 (lower is better)
Translates to: QQRSVLLIREVRTTALAPGRKGV*MSLQGV
Trigger: CACGCCCTGCAAGCTCATGCAAACACCCTTTCTTCC...AGGGGCTAGTGCAGTGGTCCTGACCTCTCTTATCAAGAGCACACTTCTTTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
CDS-3UTR GCA 90 bp GCTCAAAAGGAGCAACCAGCAAAGAAGTGTGCTCTTGATAAGAGAGGTCAGGACAGCTCTGGCCTTGGATaGATGCTGCCGGCAGACAAG +
Preference number: 4 (lower is better)
Translates to: AQKEQPAKKCALDKRGQDSSGLG*MLPADK
Trigger: CTTGTCTGCCGGCAGCATGCATCCAAGGCCAGAGCT...GTCCTGACCTCTCTTATCAAGAGCACACTTCTTTGCTGGTTGCTCCTTTTGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS-3UTR CCA 90 bp AATAAACCCAGCCTGATACAGCCCCACTTAAAAGATGGCTGCTCTGCTCCACCAGCCCCACTTAAAAGATaGCTGCTCTGCTCCACCACC +
Preference number: 4 (lower is better)
Translates to: NKPSLIQPHLKDGCSAPPAPLKR*LLCSTT
Trigger: GGTGGTGGAGCAGAGCAGCCATCTTTTAAGTGGGGC...TGGTGGAGCAGAGCAGCCATCTTTTAAGTGGGGCTGTATCAGGCTGGGTTTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
CDS-3UTR CCA 90 bp AAGAAGTGTGCTCTTGATAAGAGAGGTCAGGACCACTGCACTAGCCCCTCAGCAATGGCAGGTGAGAAGTaGAGAACAGCAGAGCCTGTG +
Preference number: 4 (lower is better)
Translates to: KKCALDKRGQDHCTSPSAMAGEK*RTAEPV
Trigger: CACAGGCTCTGCTGTTCTCCACTTCTCACCTGCCAT...TGCTGAGGGGCTAGTGCAGTGGTCCTGACCTCTCTTATCAAGAGCACACTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
CDS-3UTR CCA 90 bp GCTCAAAAGGAGCAACCAGCAAAGAAGTGTGCTCTTGATAAGAGAGGTCAGGACAAGGAACTGTGGACATaGCAGGCTAGTGGGCGTGGG +
Preference number: 4 (lower is better)
Translates to: AQKEQPAKKCALDKRGQDKELWT*QASGRG
Trigger: CCCACGCCCACTAGCCTGCCATGTCCACAGTTCCTT...GTCCTGACCTCTCTTATCAAGAGCACACTTCTTTGCTGGTTGCTCCTTTTGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
CDS-3UTR CCA 90 bp GCTCAAAAGGAGCAACCAGCAAAGAAGTGTGCTCTTGATAAGAGAGGTCAGGACCAGCCCAAGGAACTGTaGACATGGCAGGCTAGTGGG +
Preference number: 4 (lower is better)
Translates to: AQKEQPAKKCALDKRGQDQPKEL*TWQASG
Trigger: CCCACTAGCCTGCCATGTCCACAGTTCCTTGGGCTG...GTCCTGACCTCTCTTATCAAGAGCACACTTCTTTGCTGGTTGCTCCTTTTGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
CDS-3UTR TCA 90 bp TTTCTGCAGCCTATGAGGTCTCAGACCCGGACCTCTGTACACAAAGCCCCCAAAGCCGTATGCAGTGAGTaGTTTCATCAGCAGCATATC +
Preference number: 4 (lower is better)
Translates to: FLQPMRSQTRTSVHKAPKAVCSE*FHQQHI
Trigger: GATATGCTGCTGATGAAATCACTCACTGCATACGGC...TTTGGGGGCTTTGTGTACAGAGGTCCGGGTCTGAGACCTCATAGGCTGCAGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS-3UTR TCA 90 bp CAGGAGGAATACCAAGAATATGAGAACCTAGGTCCTGGCCAATTCTATTCTTCACTGCTCGGCGCTCCTTaGTGTCCTGAGGCCGTATGC +
Preference number: 4 (lower is better)
Translates to: QEEYQEYENLGPGQFYSSLLGAP*CPEAVC
Trigger: GCATACGGCCTCAGGACATCAAGGAGCGCCGAGCAG...TGAAGAATAGAATTGGCCAGGACCTAGGTTCTCATATTCTTGGTATTCCTCCTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
CDS-3UTR TCA 90 bp CAAAAGGAGCAACCAGCAAAGAAGTGTGCTCTTGATAAGAGAGGTCAGGACCACGAAAGGGTGTTTGCATaGGCTTGCAGGGCGTGGATG +
Preference number: 4 (lower is better)
Translates to: QKEQPAKKCALDKRGQDHERVFA*ACRAWM
Trigger: CATCCACGCCCTGCAAGCTCATGCAAACACCCTTTC...GTGGTCCTGACCTCTCTTATCAAGAGCACACTTCTTTGCTGGTTGCTCCTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
CDS-3UTR TCA 90 bp AATAAACCCAGCCTGATACAGCCCCACTTAAAAGATGGCTGCTCTGCTCCACCAGCCTTCCTAGAAGGATaGCATGAGGATGAGGCCCAA +
Preference number: 4 (lower is better)
Translates to: NKPSLIQPHLKDGCSAPPAFLEG*HEDEAQ
Trigger: TTGGGCCTCATCCTCATGTCATCCTTCTAGGAAGGC...TGGTGGAGCAGAGCAGCCATCTTTTAAGTGGGGCTGTATCAGGCTGGGTTTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS-3UTR GCA 90 bp CAGGAGGAATACCAAGAATATGAGAACCTAGGTCCTGGCCAATTCTATTCTTCAGCTCCTCATAGTCGCTaGGCTCGGGGTCCGAGTCCT +
Preference number: 4 (lower is better)
Translates to: QEEYQEYENLGPGQFYSSAPHSR*ARGPSP
Trigger: AGGACTCGGACCCCGAGCGCAGCGACTATGAGGAGC...TGAAGAATAGAATTGGCCAGGACCTAGGTTCTCATATTCTTGGTATTCCTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS-3UTR CCA 90 bp GCTCAAAAGGAGCAACCAGCAAAGAAGTGTGCTCTTGATAAGAGAGGTCAGGACTTTTGGATCACCAGCTaGTGCACCCACTCGGGGATC +
Preference number: 4 (lower is better)
Translates to: AQKEQPAKKCALDKRGQDFWITS*CTHSGI
Trigger: GATCCCCGAGTGGGTGCACCAGCTGGTGATCCAAAA...GTCCTGACCTCTCTTATCAAGAGCACACTTCTTTGCTGGTTGCTCCTTTTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS-3UTR CCA 90 bp CAGCAAAGAAGTGTGCTCTTGATAAGAGAGGTCAGGACCACTGCACTAGCCCCTCGAATAGGCTTGAACTaGAACTTGCAGCCGAAGCAC +
Preference number: 4 (lower is better)
Translates to: QQRSVLLIREVRTTALAPRIGLN*NLQPKH
Trigger: GTGCTTCGGCTGCAAGTTCCAGTTCAAGCCTATTCG...AGGGGCTAGTGCAGTGGTCCTGACCTCTCTTATCAAGAGCACACTTCTTTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS-3UTR CCA 90 bp CAGGAGGAATACCAAGAATATGAGAACCTAGGTCCTGGCCAATTCTATTCTTCATGCGGTGGGACCGCTTaGGTTTCAGAGCAGGGTCCC +
Preference number: 4 (lower is better)
Translates to: QEEYQEYENLGPGQFYSSCGGTA*VSEQGP
Trigger: GGGACCCTGCTCTGAAACCCAAGCGGTCCCACCGCA...TGAAGAATAGAATTGGCCAGGACCTAGGTTCTCATATTCTTGGTATTCCTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
CDS-3UTR TCA 90 bp CAGGAGGAATACCAAGAATATGAGAACCTAGGTCCTGGCCAATTCTATTCTTCAGGGACGTCATGGACTTaGGCTTCTCACGCAGGTCCG +
Preference number: 4 (lower is better)
Translates to: QEEYQEYENLGPGQFYSSGTSWT*ASHAGP
Trigger: CGGACCTGCGTGAGAAGCTCAAGTCCATGACGTCCC...TGAAGAATAGAATTGGCCAGGACCTAGGTTCTCATATTCTTGGTATTCCTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS-3UTR TCA 90 bp CAAAAGGAGCAACCAGCAAAGAAGTGTGCTCTTGATAAGAGAGGTCAGGACCACGCCTCTGTCCCCTATTaGTGCCAACAGCCTTTCCAT +
Preference number: 4 (lower is better)
Translates to: QKEQPAKKCALDKRGQDHASVPY*CQQPFH
Trigger: ATGGAAAGGCTGTTGGCATCAATAGGGGACAGAGGC...GTGGTCCTGACCTCTCTTATCAAGAGCACACTTCTTTGCTGGTTGCTCCTTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
CDS-3UTR GCA 90 bp AATAATCACACGCATATGCTCAAAAGGAGCAACCAGCAAAGAAGTGTGCTCTTGTGCCGCTCTTCACCTTaGGCGCCTCCTCCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: NNHTHMLKRSNQQRSVLLCRSSP*APPPPS
Trigger: AGAAGGAGGAGGAGGCGCGCAAGGTGAAGAGCGGCA...CAAGAGCACACTTCTTTGCTGGTTGCTCCTTTTGAGCATATGCGTGTGATTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS-3UTR GCA 90 bp CAGGAGGAATACCAAGAATATGAGAACCTAGGTCCTGGCCAATTCTATTCTTCACATCAGGGTCTGCCTTaGGGTGGGACCGCTTGGGTT +
Preference number: 4 (lower is better)
Translates to: QEEYQEYENLGPGQFYSSHQGLP*GGTAWV
Trigger: AACCCAAGCGGTCCCACCGCAAGGCAGACCCTGATG...TGAAGAATAGAATTGGCCAGGACCTAGGTTCTCATATTCTTGGTATTCCTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
CDS-3UTR GCA 90 bp AAGAAGTGTGCTCTTGATAAGAGAGGTCAGGACCACTGCACTAGCCCCTCAGCACACTTAAAAGATGGCTaGTCTGCTCCACCACCTCTA +
Preference number: 4 (lower is better)
Translates to: KKCALDKRGQDHCTSPSAHLKDG*SAPPPL
Trigger: TAGAGGTGGTGGAGCAGAGCAGCCATCTTTTAAGTG...TGCTGAGGGGCTAGTGCAGTGGTCCTGACCTCTCTTATCAAGAGCACACTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
CDS-3UTR GCA 90 bp CAAAAGGAGCAACCAGCAAAGAAGTGTGCTCTTGATAAGAGAGGTCAGGACCACCACTGTTTAAGCCCCTaGCCAGGCAACCTGAACAAC +
Preference number: 4 (lower is better)
Translates to: QKEQPAKKCALDKRGQDHHCLSP*PGNLNN
Trigger: GTTGTTCAGGTTGCCTGGGCAGGGGCTTAAACAGTG...GTGGTCCTGACCTCTCTTATCAAGAGCACACTTCTTTGCTGGTTGCTCCTTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
CDS-3UTR GCA 90 bp AATAATCACACGCATATGCTCAAAAGGAGCAACCAGCAAAGAAGTGTGCTCTTGGCCTTGGATGCATGCTaGCGGCAGACAAGATGGGGC +
Preference number: 4 (lower is better)
Translates to: NNHTHMLKRSNQQRSVLLALDAC*RQTRWG
Trigger: GCCCCATCTTGTCTGCCGGCAGCATGCATCCAAGGC...CAAGAGCACACTTCTTTGCTGGTTGCTCCTTTTGAGCATATGCGTGTGATTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS-3UTR CCA 90 bp CAGGAGGAATACCAAGAATATGAGAACCTAGGTCCTGGCCAATTCTATTCTTCAGGGTCTGCCTTGCGGTaGGACCGCTTGGGTTTCAGA +
Preference number: 4 (lower is better)
Translates to: QEEYQEYENLGPGQFYSSGSALR*DRLGFR
Trigger: TCTGAAACCCAAGCGGTCCCACCGCAAGGCAGACCC...TGAAGAATAGAATTGGCCAGGACCTAGGTTCTCATATTCTTGGTATTCCTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
CDS-3UTR CCA 90 bp CAGGAGGAATACCAAGAATATGAGAACCTAGGTCCTGGCCAATTCTATTCTTCACATCTCCAGGATCCGTaGCCTGTGGGCAGCATCAGG +
Preference number: 4 (lower is better)
Translates to: QEEYQEYENLGPGQFYSSHLQDP*PVGSIR
Trigger: CCTGATGCTGCCCACAGGCCACGGATCCTGGAGATG...TGAAGAATAGAATTGGCCAGGACCTAGGTTCTCATATTCTTGGTATTCCTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
CDS-3UTR CCA 90 bp AATAATCACACGCATATGCTCAAAAGGAGCAACCAGCAAAGAAGTGTGCTCTTGTGGGATGGCAGGGGCTaGCACTGTTTAAGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: NNHTHMLKRSNQQRSVLLWDGRG*HCLSPC
Trigger: GCAGGGGCTTAAACAGTGCCAGCCCCTGCCATCCCA...CAAGAGCACACTTCTTTGCTGGTTGCTCCTTTTGAGCATATGCGTGTGATTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
CDS-3UTR CCA 90 bp AATAATCACACGCATATGCTCAAAAGGAGCAACCAGCAAAGAAGTGTGCTCTTGTGCCGGCAGACAAGATaGGGCAGGCGCCTTCCTAGA +
Preference number: 4 (lower is better)
Translates to: NNHTHMLKRSNQQRSVLLCRQTR*GRRLPR
Trigger: TCTAGGAAGGCGCCTGCCCCATCTTGTCTGCCGGCA...CAAGAGCACACTTCTTTGCTGGTTGCTCCTTTTGAGCATATGCGTGTGATTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS-3UTR CCA 90 bp AATAATCACACGCATATGCTCAAAAGGAGCAACCAGCAAAGAAGTGTGCTCTTGCCTGAGCTCTGGCCTTaGATGCATGCTGCCGGCAGA +
Preference number: 4 (lower is better)
Translates to: NNHTHMLKRSNQQRSVLLPELWP*MHAAGR
Trigger: TCTGCCGGCAGCATGCATCCAAGGCCAGAGCTCAGG...CAAGAGCACACTTCTTTGCTGGTTGCTCCTTTTGAGCATATGCGTGTGATTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS-3UTR TCA 90 bp AATAATCACACGCATATGCTCAAAAGGAGCAACCAGCAAAGAAGTGTGCTCTTGAGTAGTTCTCAGAGCTaGAGCTACCCCTCCGCCGGT +
Preference number: 4 (lower is better)
Translates to: NNHTHMLKRSNQQRSVLLSSSQS*SYPSAG
Trigger: ACCGGCGGAGGGGTAGCTTCAGCTCTGAGAACTACT...CAAGAGCACACTTCTTTGCTGGTTGCTCCTTTTGAGCATATGCGTGTGATTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
CDS-3UTR GCA 90 bp CAGGAGGAATACCAAGAATATGAGAACCTAGGTCCTGGCCAATTCTATTCTTCAAGTCCTCCTGATACTTaGGCTTGGCCCCGGACACAG +
Preference number: 4 (lower is better)
Translates to: QEEYQEYENLGPGQFYSSSPPDT*AWPRTQ
Trigger: CTGTGTCCGGGGCCAAGCGCAAGTATCAGGAGGACT...TGAAGAATAGAATTGGCCAGGACCTAGGTTCTCATATTCTTGGTATTCCTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS-3UTR GCA 90 bp AATAATCACACGCATATGCTCAAAAGGAGCAACCAGCAAAGAAGTGTGCTCTTGCGAAGAAGTACTTGTTaGGCAGTGGGGCCCGGTCCA +
Preference number: 4 (lower is better)
Translates to: NNHTHMLKRSNQQRSVLLRRSTC*AVGPGP
Trigger: TGGACCGGGCCCCACTGCGCAACAAGTACTTCTTCG...CAAGAGCACACTTCTTTGCTGGTTGCTCCTTTTGAGCATATGCGTGTGATTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS-3UTR GCA 90 bp CAGGAGGAATACCAAGAATATGAGAACCTAGGTCCTGGCCAATTCTATTCTTCAGAAAACTTCTCAGACTaGGGGACCTGCAGCACCCGG +
Preference number: 4 (lower is better)
Translates to: QEEYQEYENLGPGQFYSSENFSD*GTCSTR
Trigger: CCGGGTGCTGCAGGTCCCGCAGTCTGAGAAGTTTTC...TGAAGAATAGAATTGGCCAGGACCTAGGTTCTCATATTCTTGGTATTCCTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541285.1
CDS-3UTR CCA 90 bp CAGGAGGAATACCAAGAATATGAGAACCTAGGTCCTGGCCAATTCTATTCTTCACCTGATACTTGCGCTTaGCCCCGGACACAGGGTAAG +
Preference number: 4 (lower is better)
Translates to: QEEYQEYENLGPGQFYSSPDTCA*PRTQGK
Trigger: CTTACCCTGTGTCCGGGGCCAAGCGCAAGTATCAGG...TGAAGAATAGAATTGGCCAGGACCTAGGTTCTCATATTCTTGGTATTCCTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS-3UTR CCA 90 bp CAGGAGGAATACCAAGAATATGAGAACCTAGGTCCTGGCCAATTCTATTCTTCAAGGACACGGACACGATaGGGCGCTCGAAGATGTGGA +
Preference number: 4 (lower is better)
Translates to: QEEYQEYENLGPGQFYSSRTRTR*GARRCG
Trigger: TCCACATCTTCGAGCGCCCCATCGTGTCCGTGTCCT...TGAAGAATAGAATTGGCCAGGACCTAGGTTCTCATATTCTTGGTATTCCTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS-3UTR TCA 90 bp CAAAAGGAGCAACCAGCAAAGAAGTGTGCTCTTGATAAGAGAGGTCAGGACCACGCCGTATGCAGTGAGTaGTTTCATCAGCAGCATATC +
Preference number: 4 (lower is better)
Translates to: QKEQPAKKCALDKRGQDHAVCSE*FHQQHI
Trigger: GATATGCTGCTGATGAAATCACTCACTGCATACGGC...GTGGTCCTGACCTCTCTTATCAAGAGCACACTTCTTTGCTGGTTGCTCCTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
CDS-3UTR TCA 90 bp CAAAAGGAGCAACCAGCAAAGAAGTGTGCTCTTGATAAGAGAGGTCAGGACCACGGAATACCAAGAATATaGGAACCTAGGTCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: QKEQPAKKCALDKRGQDHGIPRI*EPRSWP
Trigger: TGGCCAGGACCTAGGTTCTCATATTCTTGGTATTCC...GTGGTCCTGACCTCTCTTATCAAGAGCACACTTCTTTGCTGGTTGCTCCTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
CDS-3UTR TCA 90 bp GCTCAAAAGGAGCAACCAGCAAAGAAGTGTGCTCTTGATAAGAGAGGTCAGGACGGGCGAGCAGAAGACTaGACTTTGTTTAGAACACTG +
Preference number: 4 (lower is better)
Translates to: AQKEQPAKKCALDKRGQDGRAED*TLFRTL
Trigger: CAGTGTTCTAAACAAAGTTCAGTCTTCTGCTCGCCC...GTCCTGACCTCTCTTATCAAGAGCACACTTCTTTGCTGGTTGCTCCTTTTGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
CDS-3UTR GCA 90 bp AATAATCACACGCATATGCTCAAAAGGAGCAACCAGCAAAGAAGTGTGCTCTTGCCTGAGGATGATGACTaGTCGGCGCTCCTTGATGTC +
Preference number: 4 (lower is better)
Translates to: NNHTHMLKRSNQQRSVLLPEDDD*SALLDV
Trigger: GACATCAAGGAGCGCCGAGCAGTCATCATCCTCAGG...CAAGAGCACACTTCTTTGCTGGTTGCTCCTTTTGAGCATATGCGTGTGATTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
CDS-3UTR GCA 90 bp GCTCAAAAGGAGCAACCAGCAAAGAAGTGTGCTCTTGATAAGAGAGGTCAGGACCACTTAAAAGATGGCTaGTCTGCTCCACCACCTCTA +
Preference number: 4 (lower is better)
Translates to: AQKEQPAKKCALDKRGQDHLKDG*SAPPPL
Trigger: TAGAGGTGGTGGAGCAGAGCAGCCATCTTTTAAGTG...GTCCTGACCTCTCTTATCAAGAGCACACTTCTTTGCTGGTTGCTCCTTTTGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
CDS-3UTR CCA 90 bp AATAATCACACGCATATGCTCAAAAGGAGCAACCAGCAAAGAAGTGTGCTCTTGTGCTCCACCAGCTTTTaGATCACCAGCTGGTGCACC +
Preference number: 4 (lower is better)
Translates to: NNHTHMLKRSNQQRSVLLCSTSF*ITSWCT
Trigger: GGTGCACCAGCTGGTGATCCAAAAGCTGGTGGAGCA...CAAGAGCACACTTCTTTGCTGGTTGCTCCTTTTGAGCATATGCGTGTGATTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS-3UTR GCA 90 bp CAGGAGGAATACCAAGAATATGAGAACCTAGGTCCTGGCCAATTCTATTCTTCAAAAAGATGGCTGCTCTaGTCCACCACCTCTACTGGC +
Preference number: 4 (lower is better)
Translates to: QEEYQEYENLGPGQFYSSKRWLL*STTSTG
Trigger: GCCAGTAGAGGTGGTGGAGCAGAGCAGCCATCTTTT...TGAAGAATAGAATTGGCCAGGACCTAGGTTCTCATATTCTTGGTATTCCTCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
CDS-3UTR GCA 90 bp CAGGAGGAATACCAAGAATATGAGAACCTAGGTCCTGGCCAATTCTATTCTTCAGGAAGAAAGGGTGTTTaGATGAGCTTGCAGGGCGTG +
Preference number: 4 (lower is better)
Translates to: QEEYQEYENLGPGQFYSSGRKGV*MSLQGV
Trigger: CACGCCCTGCAAGCTCATGCAAACACCCTTTCTTCC...TGAAGAATAGAATTGGCCAGGACCTAGGTTCTCATATTCTTGGTATTCCTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
CDS-3UTR GCA 90 bp CAGGAGGAATACCAAGAATATGAGAACCTAGGTCCTGGCCAATTCTATTCTTCACACTGTTTAAGCCCCTaGCCAGGCAACCTGAACAAC +
Preference number: 4 (lower is better)
Translates to: QEEYQEYENLGPGQFYSSHCLSP*PGNLNN
Trigger: GTTGTTCAGGTTGCCTGGGCAGGGGCTTAAACAGTG...TGAAGAATAGAATTGGCCAGGACCTAGGTTCTCATATTCTTGGTATTCCTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
CDS-3UTR GCA 90 bp AATAAACCCAGCCTGATACAGCCCCACTTAAAAGATGGCTGCTCTGCTCCACCAATAATCACACGCATATaGTCAAAAGGAGCAACCAGC +
Preference number: 4 (lower is better)
Translates to: NKPSLIQPHLKDGCSAPPIITRI*SKGATS
Trigger: GCTGGTTGCTCCTTTTGAGCATATGCGTGTGATTAT...TGGTGGAGCAGAGCAGCCATCTTTTAAGTGGGGCTGTATCAGGCTGGGTTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
CDS-3UTR GCA 90 bp AATAATCACACGCATATGCTCAAAAGGAGCAACCAGCAAAGAAGTGTGCTCTTGGTGGTAACACGGAGCTaGTCAGGGACTTTGTTTCCA +
Preference number: 4 (lower is better)
Translates to: NNHTHMLKRSNQQRSVLLVVTRS*SGTLFP
Trigger: TGGAAACAAAGTCCCTGAGCAGCTCCGTGTTACCAC...CAAGAGCACACTTCTTTGCTGGTTGCTCCTTTTGAGCATATGCGTGTGATTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
CDS-3UTR CCA 90 bp CAGGAGGAATACCAAGAATATGAGAACCTAGGTCCTGGCCAATTCTATTCTTCAACAATAGCTTTGGGATaGCAGGGGCTGGCACTGTTT +
Preference number: 4 (lower is better)
Translates to: QEEYQEYENLGPGQFYSSTIALG*QGLALF
Trigger: AAACAGTGCCAGCCCCTGCCATCCCAAAGCTATTGT...TGAAGAATAGAATTGGCCAGGACCTAGGTTCTCATATTCTTGGTATTCCTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
CDS-3UTR TCA 90 bp AATAATCACACGCATATGCTCAAAAGGAGCAACCAGCAAAGAAGTGTGCTCTTGGGAATACCAAGAATATaGGAACCTAGGTCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: NNHTHMLKRSNQQRSVLLGIPRI*EPRSWP
Trigger: TGGCCAGGACCTAGGTTCTCATATTCTTGGTATTCC...CAAGAGCACACTTCTTTGCTGGTTGCTCCTTTTGAGCATATGCGTGTGATTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
CDS GCA 90 bp TCCCGCGGGGCAGGGGCGCCGGCAGCGCCTCATGCCGCGGAGGGCTaGTGCGGAGACGCGGCCCGACTCCCGACCAGACCCTCGGACGCC +
Preference number: 5 (lower is better)
Translates to: SRGAGAPAAPHAAEG*CGDAARLPTRPSDA
Trigger: GGCGTCCGAGGGTCTGGTCGGGAGTCGGGCCGCGTCTCCGCAGCAGCCCTCCGCGGCATGAGGCGCTGCCGGCGCCCCTGCCCCGCGGGA
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS GCA 90 bp GCGCTTGGCCCCGGACACAGGGTAAGGTTCGGCGGCAGCGGCGGCTaGGGCTGCGGCGGCTACGGCGGCTGCGGCAGCGGCGGCGGCCTC +
Preference number: 5 (lower is better)
Translates to: ALGPGHRVRFGGSGG*GCGGYGGCGSGGGL
Trigger: GAGGCCGCCGCCGCTGCCGCAGCCGCCGTAGCCGCCGCAGCCGCAGCCGCCGCTGCCGCCGAACCTTACCCTGTGTCCGGGGCCAAGCGC
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS GCA 90 bp CACCTTCTCCACGTCCCGCGGGGCAGGGGCGCCGGCAGCGCCTCATaGCGCGGAGGGCTGCTGCGGAGACGCGGCCCGACTCCCGACCAG +
Preference number: 5 (lower is better)
Translates to: HLLHVPRGRGAGSAS*RGGLLRRRGPTPDQ
Trigger: CTGGTCGGGAGTCGGGCCGCGTCTCCGCAGCAGCCCTCCGCGGCATGAGGCGCTGCCGGCGCCCCTGCCCCGCGGGACGTGGAGAAGGTG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS GCA 90 bp AGGTTCGGCGGCAGCGGCGGCTGCGGCTGCGGCGGCTACGGCGGCTaGGGCAGCGGCGGCGGCCTCCCGGCTGCCCGCCTTATAGTTGTC +
Preference number: 5 (lower is better)
Translates to: RFGGSGGCGCGGYGG*GSGGGLPAARLIVV
Trigger: GACAACTATAAGGCGGGCAGCCGGGAGGCCGCCGCCGCTGCCGCAGCCGCCGTAGCCGCCGCAGCCGCAGCCGCCGCTGCCGCCGAACCT
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS GCA 90 bp GCTCCTCATAGTCGCTGCGCTCGGGGTCCGAGTCCTCCTGATACTTaGGCTTGGCCCCGGACACAGGGTAAGGTTCGGCGGCAGCGGCGG +
Preference number: 5 (lower is better)
Translates to: APHSRCARGPSPPDT*AWPRTQGKVRRQRR
Trigger: CCGCCGCTGCCGCCGAACCTTACCCTGTGTCCGGGGCCAAGCGCAAGTATCAGGAGGACTCGGACCCCGAGCGCAGCGACTATGAGGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS TCA 90 bp CCTCCCGGCTGCCCGCCTTATAGTTGTCCCGGGACGTCATGGACTTaGGCTTCTCACGCAGGTCCGTGTAGCCGCTGGCGGCCGCCATGG +
Preference number: 5 (lower is better)
Translates to: PPGCPPYSCPGTSWT*ASHAGPCSRWRPPW
Trigger: CCATGGCGGCCGCCAGCGGCTACACGGACCTGCGTGAGAAGCTCAAGTCCATGACGTCCCGGGACAACTATAAGGCGGGCAGCCGGGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS CCA 90 bp CGGGCCTCGATCTTGGCGCACTCGTCCTGGCTGAAGAGGCGCATCTaGCGGATGCCGCTCTTCACCTTGCGCGCCTCCTCCTCCTTCTGC +
Preference number: 5 (lower is better)
Translates to: RASILAHSSWLKRRI*RMPLFTLRASSSFC
Trigger: GCAGAAGGAGGAGGAGGCGCGCAAGGTGAAGAGCGGCATCCGCCAGATGCGCCTCTTCAGCCAGGACGAGTGCGCCAAGATCGAGGCCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS TCA 90 bp CCACCTCGTCAATGCGGGCCTCGATCTTGGCGCACTCGTCCTGGCTaGAGAGGCGCATCTGGCGGATGCCGCTCTTCACCTTGCGCGCCT +
Preference number: 5 (lower is better)
Translates to: PPRQCGPRSWRTRPG*RGASGGCRSSPCAP
Trigger: AGGCGCGCAAGGTGAAGAGCGGCATCCGCCAGATGCGCCTCTTCAGCCAGGACGAGTGCGCCAAGATCGAGGCCCGCATTGACGAGGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS CCA 90 bp GACACCACCTCGTCAATGCGGGCCTCGATCTTGGCGCACTCGTCCTaGCTGAAGAGGCGCATCTGGCGGATGCCGCTCTTCACCTTGCGC +
Preference number: 5 (lower is better)
Translates to: DTTSSMRASILAHSS*LKRRIWRMPLFTLR
Trigger: GCGCAAGGTGAAGAGCGGCATCCGCCAGATGCGCCTCTTCAGCCAGGACGAGTGCGCCAAGATCGAGGCCCGCATTGACGAGGTGGTGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS GCA 90 bp TCGCCGAAGAAGTACTTGTTGCGCAGTGGGGCCCGGTCCACCGTGTaGTCGTTGTACAGGCCCTTCTCAGCGCGGGACACCACCTCGTCA +
Preference number: 5 (lower is better)
Translates to: SPKKYLLRSGARSTV*SLYRPFSARDTTSS
Trigger: TGACGAGGTGGTGTCCCGCGCTGAGAAGGGCCTGTACAACGAGCACACGGTGGACCGGGCCCCACTGCGCAACAAGTACTTCTTCGGCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS GCA 90 bp GCAGCTGGGCGCCGTAAGTGTAGCCTTCGCCGAAGAAGTACTTGTTaGGCAGTGGGGCCCGGTCCACCGTGTGCTCGTTGTACAGGCCCT +
Preference number: 5 (lower is better)
Translates to: AAGRRKCSLRRRSTC*AVGPGPPCARCTGP
Trigger: AGGGCCTGTACAACGAGCACACGGTGGACCGGGCCCCACTGCGCAACAAGTACTTCTTCGGCGAAGGCTACACTTACGGCGCCCAGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS GCA 90 bp TCGTTGATGACGGCGCTGTTGACGAAGCCCTCGGGGATGACGCGGTaGTCCACCAGCTTTTGGATCACCAGCTGGTGCACCCACTCGGGG +
Preference number: 5 (lower is better)
Translates to: SLMTALLTKPSGMTR*STSFWITSWCTHSG
Trigger: CCCCGAGTGGGTGCACCAGCTGGTGATCCAAAAGCTGGTGGAGCACCGCGTCATCCCCGAGGGCTTCGTCAACAGCGCCGTCATCAACGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS TCA 90 bp AGTCCTCTGAGGACTCGTATGACTTGCGCCAGTAGTTCTCAGAGCTaGAGCTACCCCTCCGCCGGTGTGTGGGCAGCAGCACCGAGCGCC +
Preference number: 5 (lower is better)
Translates to: SPLRTRMTCASSSQS*SYPSAGVWAAAPSA
Trigger: GGCGCTCGGTGCTGCTGCCCACACACCGGCGGAGGGGTAGCTTCAGCTCTGAGAACTACTGGCGCAAGTCATACGAGTCCTCAGAGGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399138.5
ENST00000490106.1
ENST00000541285.1
CDS GCA 90 bp CCATCTCCAGGATCCGTGGCCTGTGGGCAGCATCAGGGTCTGCCTTaGGGTGGGACCGCTTGGGTTTCAGAGCAGGGTCCCTGTTGTTTC +
Preference number: 5 (lower is better)
Translates to: PSPGSVACGQHQGLP*GGTAWVSEQGPCCF
Trigger: GAAACAACAGGGACCCTGCTCTGAAACCCAAGCGGTCCCACCGCAAGGCAGACCCTGATGCTGCCCACAGGCCACGGATCCTGGAGATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399138.5
ENST00000490106.1
ENST00000541285.1
CDS GCA 90 bp GCGGGTAGACTCAGTGCCGCCGCATCTTCACCTTTCGGGCAGGGCTaGCTGCTGCCTCAGAGCAGTCCTCTGAGGACTCGTATGACTTGC +
Preference number: 5 (lower is better)
Translates to: AGRLSAAASSPFGQG*LLPQSSPLRTRMTC
Trigger: GCAAGTCATACGAGTCCTCAGAGGACTGCTCTGAGGCAGCAGGCAGCCCTGCCCGAAAGGTGAAGATGCGGCGGCACTGAGTCTACCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399138.5
ENST00000490106.1
ENST00000541285.1
CDS CCA 90 bp GGCGCCGTAAGTGTAGCCTTCGCCGAAGAAGTACTTGTTGCGCAGTaGGGCCCGGTCCACCGTGTGCTCGTTGTACAGGCCCTTCTCAGC +
Preference number: 5 (lower is better)
Translates to: GAVSVAFAEEVLVAQ*GPVHRVLVVQALLS
Trigger: GCTGAGAAGGGCCTGTACAACGAGCACACGGTGGACCGGGCCCCACTGCGCAACAAGTACTTCTTCGGCGAAGGCTACACTTACGGCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS-3UTR CAA 90 bp GCCTTGGATGCATGCTGCCGGCAGACAAGATGGGGCAGGCGCCTTCCTAGAAGGGGTGTTTGCATGAGCTaGCAGGGCGTGGATGGCAGG +
Preference number: 5 (lower is better)
Translates to: ALDACCRQTRWGRRLPRRGVCMS*QGVDGR
Trigger: CCTGCCATCCACGCCCTGCAAGCTCATGCAAACACC...CCTTCTAGGAAGGCGCCTGCCCCATCTTGTCTGCCGGCAGCATGCATCCAAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS TCA 90 bp GAAAACTTCTCAGACTGCGGGACCTGCAGCACCCGGCCCCAGTTCTaGACCCAGATAGGAACGTCCGGCAGAAGCCAGACGCGCGTTGTC +
Preference number: 5 (lower is better)
Translates to: ENFSDCGTCSTRPQF*TQIGTSGRSQTRVV
Trigger: GACAACGCGCGTCTGGCTTCTGCCGGACGTTCCTATCTGGGTTCAGAACTGGGGCCGGGTGCTGCAGGTCCCGCAGTCTGAGAAGTTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541285.1
CDS-3UTR CAA 90 bp CCCAGCCTGATACAGCCCCACTTAAAAGATGGCTGCTCTGCTCCACCACCTCTAATGCGGGCCTCGATCTaGGCGCACTCGTCCTGGCTG +
Preference number: 5 (lower is better)
Translates to: PSLIQPHLKDGCSAPPPLMRASI*AHSSWL
Trigger: CAGCCAGGACGAGTGCGCCAAGATCGAGGCCCGCAT...TAGAGGTGGTGGAGCAGAGCAGCCATCTTTTAAGTGGGGCTGTATCAGGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS-3UTR CAA 90 bp AACTCTGCCGCAGGAGGAAGAAAGGGTGTTTGCATGAGCTTGCAGGGCGTGGATGCATCAGGGTCTGCCTaGCGGTGGGACCGCTTGGGT +
Preference number: 5 (lower is better)
Translates to: NSAAGGRKGVCMSLQGVDASGSA*RWDRLG
Trigger: ACCCAAGCGGTCCCACCGCAAGGCAGACCCTGATGC...ATCCACGCCCTGCAAGCTCATGCAAACACCCTTTCTTCCTCCTGCGGCAGAGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
CDS CCA 90 bp ACTGAGCACAGTCACGCTTCCCCTGCGCACCGGCAGGGAAAGCACTaGTTCCGACACCCGAATAGGCTTGAACTGGAACTTGCAGCCGAA +
Preference number: 5 (lower is better)
Translates to: TEHSHASPAHRQGKH*FRHPNRLELELAAE
Trigger: TTCGGCTGCAAGTTCCAGTTCAAGCCTATTCGGGTGTCGGAACCAGTGCTTTCCCTGCCGGTGCGCAGGGGAAGCGTGACTGTGCTCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS CCA 90 bp GTGAAGGTGTGGGCACCATCAGACCAATTCTCTGGCCAGGCCAAGTaGGAGCCAGCTAGACCTGGAAGCCAGCAGTCTCTGCTCTGTACC +
Preference number: 5 (lower is better)
Translates to: VKVWAPSDQFSGQAK*EPARPGSQQSLLCT
Trigger: GGTACAGAGCAGAGACTGCTGGCTTCCAGGTCTAGCTGGCTCCCACTTGGCCTGGCCAGAGAATTGGTCTGATGGTGCCCACACCTTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490106.1
CDS-3UTR CAA 90 bp AACTCTGCCGCAGGAGGAAGAAAGGGTGTTTGCATGAGCTTGCAGGGCGTGGATTTGCGGTGGGACCGCTaGGGTTTCAGAGCAGGGTCC +
Preference number: 5 (lower is better)
Translates to: NSAAGGRKGVCMSLQGVDLRWDR*GFRAGS
Trigger: GGACCCTGCTCTGAAACCCAAGCGGTCCCACCGCAA...ATCCACGCCCTGCAAGCTCATGCAAACACCCTTTCTTCCTCCTGCGGCAGAGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
CDS CCA 90 bp AAAGGAAACATGCATGGGGTCACCAAAGGGCCTCCGGTGAAGGTGTaGGCACCATCAGACCAATTCTCTGGCCAGGCCAAGTGGGAGCCA +
Preference number: 5 (lower is better)
Translates to: KGNMHGVTKGPPVKV*APSDQFSGQAKWEP
Trigger: TGGCTCCCACTTGGCCTGGCCAGAGAATTGGTCTGATGGTGCCCACACCTTCACCGGAGGCCCTTTGGTGACCCCATGCATGTTTCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490106.1
CDS-3UTR CAA 90 bp CCCAGCCTGATACAGCCCCACTTAAAAGATGGCTGCTCTGCTCCACCACCTCTACGGGACGTCATGGACTaGAGCTTCTCACGCAGGTCC +
Preference number: 5 (lower is better)
Translates to: PSLIQPHLKDGCSAPPPLRDVMD*SFSRRS
Trigger: GGACCTGCGTGAGAAGCTCAAGTCCATGACGTCCCG...TAGAGGTGGTGGAGCAGAGCAGCCATCTTTTAAGTGGGGCTGTATCAGGCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS-3UTR CAA 90 bp AAACCCAGCCTGATACAGCCCCACTTAAAAGATGGCTGCTCTGCTCCACCACCTTTGCGGTGGGACCGCTaGGGTTTCAGAGCAGGGTCC +
Preference number: 5 (lower is better)
Translates to: KPSLIQPHLKDGCSAPPPLRWDR*GFRAGS
Trigger: GGACCCTGCTCTGAAACCCAAGCGGTCCCACCGCAA...AGGTGGTGGAGCAGAGCAGCCATCTTTTAAGTGGGGCTGTATCAGGCTGGGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
CDS-3UTR CAA 90 bp AAGAAGTGTGCTCTTGATAAGAGAGGTCAGGACCACTGCACTAGCCCCTCAGCAGAAGCCAGACGCGCGTaGTCGGGGTACAAGCCAGCC +
Preference number: 5 (lower is better)
Translates to: KKCALDKRGQDHCTSPSAEARRA*SGYKPA
Trigger: GGCTGGCTTGTACCCCGACAACGCGCGTCTGGCTTC...TGCTGAGGGGCTAGTGCAGTGGTCCTGACCTCTCTTATCAAGAGCACACTTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541285.1
CDS TCA 90 bp TGTCCTGCAAAGGAAACATGCATGGGGTCACCAAAGGGCCTCCGGTaGAGGTGTGGGCACCATCAGACCAATTCTCTGGCCAGGCCAAGT +
Preference number: 5 (lower is better)
Translates to: CPAKETCMGSPKGLR*RCGHHQTNSLARPS
Trigger: ACTTGGCCTGGCCAGAGAATTGGTCTGATGGTGCCCACACCTTCACCGGAGGCCCTTTGGTGACCCCATGCATGTTTCCTTTGCAGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490106.1
CDS CCA 90 bp ACCGGCAGGGAAAGCACTGGTTCCGACACCCGAATAGGCTTGAACTaGAACTTGCAGCCGAAGCACAGCGCAGAGTCGCTAAAGAAGGAC +
Preference number: 5 (lower is better)
Translates to: TGRESTGSDTRIGLN*NLQPKHSAESLKKD
Trigger: GTCCTTCTTTAGCGACTCTGCGCTGTGCTTCGGCTGCAAGTTCCAGTTCAAGCCTATTCGGGTGTCGGAACCAGTGCTTTCCCTGCCGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS CCA 90 bp GAGCAGGGTCCCTGTTGTTTCCTGACAGGCGATCTGAAGCATAGCTaGGTGGTAACACGGAGCTGCTCAGGGACTTTGTTTCCAACCGGG +
Preference number: 5 (lower is better)
Translates to: EQGPCCFLTGDLKHS*VVTRSCSGTLFPTG
Trigger: CCCGGTTGGAAACAAAGTCCCTGAGCAGCTCCGTGTTACCACCCAGCTATGCTTCAGATCGCCTGTCAGGAAACAACAGGGACCCTGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399138.5
ENST00000490106.1
ENST00000541285.1
CDS-3UTR CAA 90 bp AAGAAGTGTGCTCTTGATAAGAGAGGTCAGGACCACTGCACTAGCCCCTCAGCATCGCCGAAGAAGTACTaGTTGCGCAGTGGGGCCCGG +
Preference number: 5 (lower is better)
Translates to: KKCALDKRGQDHCTSPSASPKKY*LRSGAR
Trigger: CCGGGCCCCACTGCGCAACAAGTACTTCTTCGGCGA...TGCTGAGGGGCTAGTGCAGTGGTCCTGACCTCTCTTATCAAGAGCACACTTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS-3UTR CAA 90 bp AAACCCAGCCTGATACAGCCCCACTTAAAAGATGGCTGCTCTGCTCCACCACCTTTGATGACGGCGCTGTaGACGAAGCCCTCGGGGATG +
Preference number: 5 (lower is better)
Translates to: KPSLIQPHLKDGCSAPPPLMTAL*TKPSGM
Trigger: CATCCCCGAGGGCTTCGTCAACAGCGCCGTCATCAA...AGGTGGTGGAGCAGAGCAGCCATCTTTTAAGTGGGGCTGTATCAGGCTGGGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS-3UTR CAA 90 bp AAACCCAGCCTGATACAGCCCCACTTAAAAGATGGCTGCTCTGCTCCACCACCTGGTGTTTGCATGAGCTaGCAGGGCGTGGATGGCAGG +
Preference number: 5 (lower is better)
Translates to: KPSLIQPHLKDGCSAPPPGVCMS*QGVDGR
Trigger: CCTGCCATCCACGCCCTGCAAGCTCATGCAAACACC...AGGTGGTGGAGCAGAGCAGCCATCTTTTAAGTGGGGCTGTATCAGGCTGGGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
CDS-3UTR CAA 90 bp AAGAGAGGTCAGGACCACTGCACTAGCCCCTCAGCAGCCCAAGGAACTGTGGACAGGAAGAAAGGGTGTTaGCATGAGCTTGCAGGGCGT +
Preference number: 5 (lower is better)
Translates to: KRGQDHCTSPSAAQGTVDRKKGC*HELAGR
Trigger: ACGCCCTGCAAGCTCATGCAAACACCCTTTCTTCCT...GTCCACAGTTCCTTGGGCTGCTGAGGGGCTAGTGCAGTGGTCCTGACCTCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
CDS-3UTR CAA 90 bp AAGAAGTGTGCTCTTGATAAGAGAGGTCAGGACCACTGCACTAGCCCCTCAGCATCCACCGTGTGCTCGTaGTACAGGCCCTTCTCAGCG +
Preference number: 5 (lower is better)
Translates to: KKCALDKRGQDHCTSPSASTVCS*YRPFSA
Trigger: CGCTGAGAAGGGCCTGTACAACGAGCACACGGTGGA...TGCTGAGGGGCTAGTGCAGTGGTCCTGACCTCTCTTATCAAGAGCACACTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS-3UTR CAA 90 bp AAACCCAGCCTGATACAGCCCCACTTAAAAGATGGCTGCTCTGCTCCACCACCTGTGCTCCACCAGCTTTaGGATCACCAGCTGGTGCAC +
Preference number: 5 (lower is better)
Translates to: KPSLIQPHLKDGCSAPPPVLHQL*DHQLVH
Trigger: GTGCACCAGCTGGTGATCCAAAAGCTGGTGGAGCAC...AGGTGGTGGAGCAGAGCAGCCATCTTTTAAGTGGGGCTGTATCAGGCTGGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS-3UTR CAA 90 bp CCCAGCCTGATACAGCCCCACTTAAAAGATGGCTGCTCTGCTCCACCACCTCTAGACACCCGAATAGGCTaGAACTGGAACTTGCAGCCG +
Preference number: 5 (lower is better)
Translates to: PSLIQPHLKDGCSAPPPLDTRIG*NWNLQP
Trigger: CGGCTGCAAGTTCCAGTTCAAGCCTATTCGGGTGTC...TAGAGGTGGTGGAGCAGAGCAGCCATCTTTTAAGTGGGGCTGTATCAGGCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS-3UTR CAA 90 bp CCCAGCCTGATACAGCCCCACTTAAAAGATGGCTGCTCTGCTCCACCACCTCTAAGCTGCTCAGGGACTTaGTTTCCAACCGGGGTGCAT +
Preference number: 5 (lower is better)
Translates to: PSLIQPHLKDGCSAPPPLSCSGT*FPTGVH
Trigger: ATGCACCCCGGTTGGAAACAAAGTCCCTGAGCAGCT...TAGAGGTGGTGGAGCAGAGCAGCCATCTTTTAAGTGGGGCTGTATCAGGCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
CDS-3UTR CAA 90 bp GCTCAAAAGGAGCAACCAGCAAAGAAGTGTGCTCTTGATAAGAGAGGTCAGGACGCATCAGGGTCTGCCTaGCGGTGGGACCGCTTGGGT +
Preference number: 5 (lower is better)
Translates to: AQKEQPAKKCALDKRGQDASGSA*RWDRLG
Trigger: ACCCAAGCGGTCCCACCGCAAGGCAGACCCTGATGC...GTCCTGACCTCTCTTATCAAGAGCACACTTCTTTGCTGGTTGCTCCTTTTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
CDS-3UTR CAA 90 bp TTTCTGCAGCCTATGAGGTCTCAGACCCGGACCTCTGTACACAAAGCCCCCAAACGCCGGTTCTCTTCCTaGTCCATCTCCAGGATCCGT +
Preference number: 5 (lower is better)
Translates to: FLQPMRSQTRTSVHKAPKRRFSS*SISRIR
Trigger: ACGGATCCTGGAGATGGACAAGGAAGAGAACCGGCG...TTTGGGGGCTTTGTGTACAGAGGTCCGGGTCTGAGACCTCATAGGCTGCAGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS-3UTR CAA 90 bp AAACCCAGCCTGATACAGCCCCACTTAAAAGATGGCTGCTCTGCTCCACCACCTCGCCGGTTCTCTTCCTaGTCCATCTCCAGGATCCGT +
Preference number: 5 (lower is better)
Translates to: KPSLIQPHLKDGCSAPPPRRFSS*SISRIR
Trigger: ACGGATCCTGGAGATGGACAAGGAAGAGAACCGGCG...AGGTGGTGGAGCAGAGCAGCCATCTTTTAAGTGGGGCTGTATCAGGCTGGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
CDS-3UTR CAA 90 bp CCCAGCCTGATACAGCCCCACTTAAAAGATGGCTGCTCTGCTCCACCACCTCTACCCCAAATGCTAGACTaGGAAGGACACCAGTCCCTC +
Preference number: 5 (lower is better)
Translates to: PSLIQPHLKDGCSAPPPLPQMLD*EGHQSL
Trigger: GAGGGACTGGTGTCCTTCCAAGTCTAGCATTTGGGG...TAGAGGTGGTGGAGCAGAGCAGCCATCTTTTAAGTGGGGCTGTATCAGGCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
CDS-3UTR CAA 90 bp CAAAAGGAGCAACCAGCAAAGAAGTGTGCTCTTGATAAGAGAGGTCAGGACCACCCGAAGAAGTACTTGTaGCGCAGTGGGGCCCGGTCC +
Preference number: 5 (lower is better)
Translates to: QKEQPAKKCALDKRGQDHPKKYL*RSGARS
Trigger: GGACCGGGCCCCACTGCGCAACAAGTACTTCTTCGG...GTGGTCCTGACCTCTCTTATCAAGAGCACACTTCTTTGCTGGTTGCTCCTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS-3UTR CAA 90 bp CCCAGCCTGATACAGCCCCACTTAAAAGATGGCTGCTCTGCTCCACCACCTCTAAGGAAGAAAGGGTGTTaGCATGAGCTTGCAGGGCGT +
Preference number: 5 (lower is better)
Translates to: PSLIQPHLKDGCSAPPPLRKKGC*HELAGR
Trigger: ACGCCCTGCAAGCTCATGCAAACACCCTTTCTTCCT...TAGAGGTGGTGGAGCAGAGCAGCCATCTTTTAAGTGGGGCTGTATCAGGCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
CDS-3UTR CAA 90 bp AAACCCAGCCTGATACAGCCCCACTTAAAAGATGGCTGCTCTGCTCCACCACCTGGCTTAACAATAGCTTaGGGATGGCAGGGGCTGGCA +
Preference number: 5 (lower is better)
Translates to: KPSLIQPHLKDGCSAPPPGLTIA*GWQGLA
Trigger: TGCCAGCCCCTGCCATCCCAAAGCTATTGTTAAGCC...AGGTGGTGGAGCAGAGCAGCCATCTTTTAAGTGGGGCTGTATCAGGCTGGGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
CDS GCA 90 bp TGCTCAGGGACTTTGTTTCCAACCGGGGTGCATCTAATCTTGTCCTaGAAAGGAAACATGCATGGGGTCACCAAAGGGCCTCCGGTGAAG +
Preference number: 5 (lower is better)
Translates to: CSGTLFPTGVHLILS*KGNMHGVTKGPPVK
Trigger: CTTCACCGGAGGCCCTTTGGTGACCCCATGCATGTTTCCTTTGCAGGACAAGATTAGATGCACCCCGGTTGGAAACAAAGTCCCTGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490106.1
CDS GCA 90 bp TTCCTGACAGGCGATCTGAAGCATAGCTGGGTGGTAACACGGAGCTaGTCAGGGACTTTGTTTCCAACCGGGGTGCATCTAATCTTGTCC +
Preference number: 5 (lower is better)
Translates to: FLTGDLKHSWVVTRS*SGTLFPTGVHLILS
Trigger: GGACAAGATTAGATGCACCCCGGTTGGAAACAAAGTCCCTGAGCAGCTCCGTGTTACCACCCAGCTATGCTTCAGATCGCCTGTCAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490106.1
CDS-3UTR CAA 90 bp CAGCAAAGAAGTGTGCTCTTGATAAGAGAGGTCAGGACCACTGCACTAGCCCCTAGAGCAGGGTCCCTGTaGTTTCCTGACAGGCGATCT +
Preference number: 5 (lower is better)
Translates to: QQRSVLLIREVRTTALAPRAGSL*FPDRRS
Trigger: AGATCGCCTGTCAGGAAACAACAGGGACCCTGCTCT...AGGGGCTAGTGCAGTGGTCCTGACCTCTCTTATCAAGAGCACACTTCTTTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
CDS-3UTR CAA 90 bp TTTCTGCAGCCTATGAGGTCTCAGACCCGGACCTCTGTACACAAAGCCCCCAAAAGCCTCTGTCCCCTATaGATGCCAACAGCCTTTCCA +
Preference number: 5 (lower is better)
Translates to: FLQPMRSQTRTSVHKAPKSLCPL*MPTAFP
Trigger: TGGAAAGGCTGTTGGCATCAATAGGGGACAGAGGCT...TTTGGGGGCTTTGTGTACAGAGGTCCGGGTCTGAGACCTCATAGGCTGCAGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS-3UTR CAA 90 bp CAGCAAAGAAGTGTGCTCTTGATAAGAGAGGTCAGGACCACTGCACTAGCCCCTCCCCAAATGCTAGACTaGGAAGGACACCAGTCCCTC +
Preference number: 5 (lower is better)
Translates to: QQRSVLLIREVRTTALAPPQMLD*EGHQSL
Trigger: GAGGGACTGGTGTCCTTCCAAGTCTAGCATTTGGGG...AGGGGCTAGTGCAGTGGTCCTGACCTCTCTTATCAAGAGCACACTTCTTTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
CDS GCA 90 bp TTCCTGACAGGCGATCTGAAGCATAGCTGGGTGGTAACACGGAGCTaGTCAGGGACTTTGTTTCCAACCGGGGTGCATCTAATCTTGTCT +
Preference number: 5 (lower is better)
Translates to: FLTGDLKHSWVVTRS*SGTLFPTGVHLILS
Trigger: AGACAAGATTAGATGCACCCCGGTTGGAAACAAAGTCCCTGAGCAGCTCCGTGTTACCACCCAGCTATGCTTCAGATCGCCTGTCAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
CDS-3UTR CAA 90 bp GCTCAAAAGGAGCAACCAGCAAAGAAGTGTGCTCTTGATAAGAGAGGTCAGGACGGCTTGAACTGGAACTaGCAGCCGAAGCACAGCGCA +
Preference number: 5 (lower is better)
Translates to: AQKEQPAKKCALDKRGQDGLNWN*QPKHSA
Trigger: TGCGCTGTGCTTCGGCTGCAAGTTCCAGTTCAAGCC...GTCCTGACCTCTCTTATCAAGAGCACACTTCTTTGCTGGTTGCTCCTTTTGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS-3UTR CAA 90 bp GCTCAAAAGGAGCAACCAGCAAAGAAGTGTGCTCTTGATAAGAGAGGTCAGGACAGAGCAGGGTCCCTGTaGTTTCCTGACAGGCGATCT +
Preference number: 5 (lower is better)
Translates to: AQKEQPAKKCALDKRGQDRAGSL*FPDRRS
Trigger: AGATCGCCTGTCAGGAAACAACAGGGACCCTGCTCT...GTCCTGACCTCTCTTATCAAGAGCACACTTCTTTGCTGGTTGCTCCTTTTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
CDS-3UTR CAA 90 bp AAGAAGTGTGCTCTTGATAAGAGAGGTCAGGACCACTGCACTAGCCCCTCAGCACAAAGAAGTGTGCTCTaGATAAGAGAGGTCAGGACC +
Preference number: 5 (lower is better)
Translates to: KKCALDKRGQDHCTSPSAQRSVL*IREVRT
Trigger: GGTCCTGACCTCTCTTATCAAGAGCACACTTCTTTG...TGCTGAGGGGCTAGTGCAGTGGTCCTGACCTCTCTTATCAAGAGCACACTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
CDS-3UTR CAA 90 bp CAGCAAAGAAGTGTGCTCTTGATAAGAGAGGTCAGGACCACTGCACTAGCCCCTCAAAGAAGTGTGCTCTaGATAAGAGAGGTCAGGACC +
Preference number: 5 (lower is better)
Translates to: QQRSVLLIREVRTTALAPQRSVL*IREVRT
Trigger: GGTCCTGACCTCTCTTATCAAGAGCACACTTCTTTG...AGGGGCTAGTGCAGTGGTCCTGACCTCTCTTATCAAGAGCACACTTCTTTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
CDS-3UTR CAA 90 bp AATAATCACACGCATATGCTCAAAAGGAGCAACCAGCAAAGAAGTGTGCTCTTGGGCTTAACAATAGCTTaGGGATGGCAGGGGCTGGCA +
Preference number: 5 (lower is better)
Translates to: NNHTHMLKRSNQQRSVLLGLTIA*GWQGLA
Trigger: TGCCAGCCCCTGCCATCCCAAAGCTATTGTTAAGCC...CAAGAGCACACTTCTTTGCTGGTTGCTCCTTTTGAGCATATGCGTGTGATTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399138.5
ENST00000541285.1
CDS GCA 72 bp GGGGCGCCGGCAGCGCCTCATGCCGCGGAGGGCTGCTaGGGAGACGCGGCCCGACTCCCGACCAGACCCTCG +
Preference number: 6 (lower is better)
Translates to: GAPAAPHAAEGC*GDAARLPTRPS
Trigger: CGAGGGTCTGGTCGGGAGTCGGGCCGCGTCTCCGCAGCAGCCCTCCGCGGCATGAGGCGCTGCCGGCGCCCC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS GCA 72 bp GCAGGGGCGCCGGCAGCGCCTCATGCCGCGGAGGGCTaGTGCGGAGACGCGGCCCGACTCCCGACCAGACCC +
Preference number: 6 (lower is better)
Translates to: AGAPAAPHAAEG*CGDAARLPTRP
Trigger: GGGTCTGGTCGGGAGTCGGGCCGCGTCTCCGCAGCAGCCCTCCGCGGCATGAGGCGCTGCCGGCGCCCCTGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS GCA 72 bp CCCGGACACAGGGTAAGGTTCGGCGGCAGCGGCGGCTaGGGCTGCGGCGGCTACGGCGGCTGCGGCAGCGGC +
Preference number: 6 (lower is better)
Translates to: PGHRVRFGGSGG*GCGGYGGCGSG
Trigger: GCCGCTGCCGCAGCCGCCGTAGCCGCCGCAGCCGCAGCCGCCGCTGCCGCCGAACCTTACCCTGTGTCCGGG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS CCA 72 bp TCTCACGCAGGTCCGTGTAGCCGCTGGCGGCCGCCATaGCCCCCACGACGCTGCTCTAGGGTCCTCCGGGGC +
Preference number: 6 (lower is better)
Translates to: SHAGPCSRWRPP*PPRRCSRVLRG
Trigger: GCCCCGGAGGACCCTAGAGCAGCGTCGTGGGGGCCATGGCGGCCGCCAGCGGCTACACGGACCTGCGTGAGA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS CCA 72 bp TGCGCTCGGGGTCCGAGTCCTCCTGATACTTGCGCTTaGCCCCGGACACAGGGTAAGGTTCGGCGGCAGCGG +
Preference number: 6 (lower is better)
Translates to: CARGPSPPDTCA*PRTQGKVRRQR
Trigger: CCGCTGCCGCCGAACCTTACCCTGTGTCCGGGGCCAAGCGCAAGTATCAGGAGGACTCGGACCCCGAGCGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS CAA 90 bp CCCTTCTCAGCGCGGGACACCACCTCGTCAATGCGGGCCTCGATCTaGGCGCACTCGTCCTGGCTGAAGAGGCGCATCTGGCGGATGCCG +
Preference number: 6 (lower is better)
Translates to: PFSARDTTSSMRASI*AHSSWLKRRIWRMP
Trigger: CGGCATCCGCCAGATGCGCCTCTTCAGCCAGGACGAGTGCGCCAAGATCGAGGCCCGCATTGACGAGGTGGTGTCCCGCGCTGAGAAGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS GCA 72 bp AGTCGCTGCGCTCGGGGTCCGAGTCCTCCTGATACTTaGGCTTGGCCCCGGACACAGGGTAAGGTTCGGCGG +
Preference number: 6 (lower is better)
Translates to: SRCARGPSPPDT*AWPRTQGKVRR
Trigger: CCGCCGAACCTTACCCTGTGTCCGGGGCCAAGCGCAAGTATCAGGAGGACTCGGACCCCGAGCGCAGCGACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS GCA 72 bp ACGCGGTGCTCCACCAGCTTTTGGATCACCAGCTGGTaGACCCACTCGGGGATCTCGTCCACGTCGCCCGGC +
Preference number: 6 (lower is better)
Translates to: TRCSTSFWITSW*THSGISSTSPG
Trigger: GCCGGGCGACGTGGACGAGATCCCCGAGTGGGTGCACCAGCTGGTGATCCAAAAGCTGGTGGAGCACCGCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS GCA 72 bp GGATCCGTGGCCTGTGGGCAGCATCAGGGTCTGCCTTaGGGTGGGACCGCTTGGGTTTCAGAGCAGGGTCCC +
Preference number: 6 (lower is better)
Translates to: GSVACGQHQGLP*GGTAWVSEQGP
Trigger: GGGACCCTGCTCTGAAACCCAAGCGGTCCCACCGCAAGGCAGACCCTGATGCTGCCCACAGGCCACGGATCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399138.5
ENST00000490106.1
ENST00000541285.1
CDS CAA 72 bp GCGCGGGACACCACCTCGTCAATGCGGGCCTCGATCTaGGCGCACTCGTCCTGGCTGAAGAGGCGCATCTGG +
Preference number: 6 (lower is better)
Translates to: ARDTTSSMRASI*AHSSWLKRRIW
Trigger: CCAGATGCGCCTCTTCAGCCAGGACGAGTGCGCCAAGATCGAGGCCCGCATTGACGAGGTGGTGTCCCGCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS CAA 72 bp TTGTTGCGCAGTGGGGCCCGGTCCACCGTGTGCTCGTaGTACAGGCCCTTCTCAGCGCGGGACACCACCTCG +
Preference number: 6 (lower is better)
Translates to: LLRSGARSTVCS*YRPFSARDTTS
Trigger: CGAGGTGGTGTCCCGCGCTGAGAAGGGCCTGTACAACGAGCACACGGTGGACCGGGCCCCACTGCGCAACAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS CAA 90 bp CTCCGCCGGTGTGTGGGCAGCAGCACCGAGCGCCGGTTCTCTTCCTaGTCCATCTCCAGGATCCGTGGCCTGTGGGCAGCATCAGGGTCT +
Preference number: 6 (lower is better)
Translates to: LRRCVGSSTERRFSS*SISRIRGLWAASGS
Trigger: AGACCCTGATGCTGCCCACAGGCCACGGATCCTGGAGATGGACAAGGAAGAGAACCGGCGCTCGGTGCTGCTGCCCACACACCGGCGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399138.5
ENST00000490106.1
ENST00000541285.1
CDS GCA 72 bp CTCCAGGATCCGTGGCCTGTGGGCAGCATCAGGGTCTaGCTTGCGGTGGGACCGCTTGGGTTTCAGAGCAGG +
Preference number: 6 (lower is better)
Translates to: LQDPWPVGSIRV*LAVGPLGFQSR
Trigger: CCTGCTCTGAAACCCAAGCGGTCCCACCGCAAGGCAGACCCTGATGCTGCCCACAGGCCACGGATCCTGGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399138.5
ENST00000490106.1
ENST00000541285.1
CDS CCA 72 bp ATCTTGGCGCACTCGTCCTGGCTGAAGAGGCGCATCTaGCGGATGCCGCTCTTCACCTTGCGCGCCTCCTCC +
Preference number: 6 (lower is better)
Translates to: ILAHSSWLKRRI*RMPLFTLRASS
Trigger: GGAGGAGGCGCGCAAGGTGAAGAGCGGCATCCGCCAGATGCGCCTCTTCAGCCAGGACGAGTGCGCCAAGAT
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS CCA 72 bp AGGACACGGACACGATGGGGCGCTCGAAGATGTGGATaGGGTCCACGTGAGACACGATGCAGCCGCCGGGCT +
Preference number: 6 (lower is better)
Translates to: RTRTRWGARRCG*GPRETRCSRRA
Trigger: AGCCCGGCGGCTGCATCGTGTCTCACGTGGACCCCATCCACATCTTCGAGCGCCCCATCGTGTCCGTGTCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS CAA 72 bp AGGATCCGTGGCCTGTGGGCAGCATCAGGGTCTGCCTaGCGGTGGGACCGCTTGGGTTTCAGAGCAGGGTCC +
Preference number: 6 (lower is better)
Translates to: RIRGLWAASGSA*RWDRLGFRAGS
Trigger: GGACCCTGCTCTGAAACCCAAGCGGTCCCACCGCAAGGCAGACCCTGATGCTGCCCACAGGCCACGGATCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399138.5
ENST00000490106.1
ENST00000541285.1
CDS TCA 72 bp CAATGCGGGCCTCGATCTTGGCGCACTCGTCCTGGCTaGAGAGGCGCATCTGGCGGATGCCGCTCTTCACCT +
Preference number: 6 (lower is better)
Translates to: QCGPRSWRTRPG*RGASGGCRSSP
Trigger: AGGTGAAGAGCGGCATCCGCCAGATGCGCCTCTTCAGCCAGGACGAGTGCGCCAAGATCGAGGCCCGCATTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS TCA 72 bp TCAGACTGCGGGACCTGCAGCACCCGGCCCCAGTTCTaGACCCAGATAGGAACGTCCGGCAGAAGCCAGACG +
Preference number: 6 (lower is better)
Translates to: SDCGTCSTRPQF*TQIGTSGRSQT
Trigger: CGTCTGGCTTCTGCCGGACGTTCCTATCTGGGTTCAGAACTGGGGCCGGGTGCTGCAGGTCCCGCAGTCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541285.1
CDS GCA 72 bp AAGTACTTGTTGCGCAGTGGGGCCCGGTCCACCGTGTaGTCGTTGTACAGGCCCTTCTCAGCGCGGGACACC +
Preference number: 6 (lower is better)
Translates to: KYLLRSGARSTV*SLYRPFSARDT
Trigger: GGTGTCCCGCGCTGAGAAGGGCCTGTACAACGAGCACACGGTGGACCGGGCCCCACTGCGCAACAAGTACTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS GCA 72 bp ACGGCGCTGTTGACGAAGCCCTCGGGGATGACGCGGTaGTCCACCAGCTTTTGGATCACCAGCTGGTGCACC +
Preference number: 6 (lower is better)
Translates to: TALLTKPSGMTR*STSFWITSWCT
Trigger: GGTGCACCAGCTGGTGATCCAAAAGCTGGTGGAGCACCGCGTCATCCCCGAGGGCTTCGTCAACAGCGCCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS CCA 72 bp TCGTCAATGCGGGCCTCGATCTTGGCGCACTCGTCCTaGCTGAAGAGGCGCATCTGGCGGATGCCGCTCTTC +
Preference number: 6 (lower is better)
Translates to: SSMRASILAHSS*LKRRIWRMPLF
Trigger: GAAGAGCGGCATCCGCCAGATGCGCCTCTTCAGCCAGGACGAGTGCGCCAAGATCGAGGCCCGCATTGACGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS CCA 72 bp ATGACGCGGTGCTCCACCAGCTTTTGGATCACCAGCTaGTGCACCCACTCGGGGATCTCGTCCACGTCGCCC +
Preference number: 6 (lower is better)
Translates to: MTRCSTSFWITS*CTHSGISSTSP
Trigger: GGGCGACGTGGACGAGATCCCCGAGTGGGTGCACCAGCTGGTGATCCAAAAGCTGGTGGAGCACCGCGTCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS CAA 72 bp GAAGCCCTCGGGGATGACGCGGTGCTCCACCAGCTTTaGGATCACCAGCTGGTGCACCCACTCGGGGATCTC +
Preference number: 6 (lower is better)
Translates to: EALGDDAVLHQL*DHQLVHPLGDL
Trigger: GAGATCCCCGAGTGGGTGCACCAGCTGGTGATCCAAAAGCTGGTGGAGCACCGCGTCATCCCCGAGGGCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS CAA 72 bp TGTGTGGGCAGCAGCACCGAGCGCCGGTTCTCTTCCTaGTCCATCTCCAGGATCCGTGGCCTGTGGGCAGCA +
Preference number: 6 (lower is better)
Translates to: CVGSSTERRFSS*SISRIRGLWAA
Trigger: TGCTGCCCACAGGCCACGGATCCTGGAGATGGACAAGGAAGAGAACCGGCGCTCGGTGCTGCTGCCCACACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399138.5
ENST00000490106.1
ENST00000541285.1
CDS CAA 90 bp GCTGTTGACGAAGCCCTCGGGGATGACGCGGTGCTCCACCAGCTTTaGGATCACCAGCTGGTGCACCCACTCGGGGATCTCGTCCACGTC +
Preference number: 6 (lower is better)
Translates to: AVDEALGDDAVLHQL*DHQLVHPLGDLVHV
Trigger: GACGTGGACGAGATCCCCGAGTGGGTGCACCAGCTGGTGATCCAAAAGCTGGTGGAGCACCGCGTCATCCCCGAGGGCTTCGTCAACAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS CAA 90 bp AAGAAGTACTTGTTGCGCAGTGGGGCCCGGTCCACCGTGTGCTCGTaGTACAGGCCCTTCTCAGCGCGGGACACCACCTCGTCAATGCGG +
Preference number: 6 (lower is better)
Translates to: KKYLLRSGARSTVCS*YRPFSARDTTSSMR
Trigger: CCGCATTGACGAGGTGGTGTCCCGCGCTGAGAAGGGCCTGTACAACGAGCACACGGTGGACCGGGCCCCACTGCGCAACAAGTACTTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS TCA 72 bp TGCCCGCCTTATAGTTGTCCCGGGACGTCATGGACTTaGGCTTCTCACGCAGGTCCGTGTAGCCGCTGGCGG +
Preference number: 6 (lower is better)
Translates to: CPPYSCPGTSWT*ASHAGPCSRWR
Trigger: CCGCCAGCGGCTACACGGACCTGCGTGAGAAGCTCAAGTCCATGACGTCCCGGGACAACTATAAGGCGGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS GCA 72 bp CCTCCTCCTTCTGCAGCTGCTGCTCCTCATAGTCGCTaGGCTCGGGGTCCGAGTCCTCCTGATACTTGCGCT +
Preference number: 6 (lower is better)
Translates to: PPPSAAAAPHSR*ARGPSPPDTCA
Trigger: AGCGCAAGTATCAGGAGGACTCGGACCCCGAGCGCAGCGACTATGAGGAGCAGCAGCTGCAGAAGGAGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS CAA 90 bp TCCATCTCCAGGATCCGTGGCCTGTGGGCAGCATCAGGGTCTGCCTaGCGGTGGGACCGCTTGGGTTTCAGAGCAGGGTCCCTGTTGTTT +
Preference number: 6 (lower is better)
Translates to: SISRIRGLWAASGSA*RWDRLGFRAGSLLF
Trigger: AAACAACAGGGACCCTGCTCTGAAACCCAAGCGGTCCCACCGCAAGGCAGACCCTGATGCTGCCCACAGGCCACGGATCCTGGAGATGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399138.5
ENST00000490106.1
ENST00000541285.1
CDS GCA 72 bp CGCCGTAAGTGTAGCCTTCGCCGAAGAAGTACTTGTTaGGCAGTGGGGCCCGGTCCACCGTGTGCTCGTTGT +
Preference number: 6 (lower is better)
Translates to: RRKCSLRRRSTC*AVGPGPPCARC
Trigger: ACAACGAGCACACGGTGGACCGGGCCCCACTGCGCAACAAGTACTTCTTCGGCGAAGGCTACACTTACGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS CCA 72 bp AGTGTAGCCTTCGCCGAAGAAGTACTTGTTGCGCAGTaGGGCCCGGTCCACCGTGTGCTCGTTGTACAGGCC +
Preference number: 6 (lower is better)
Translates to: SVAFAEEVLVAQ*GPVHRVLVVQA
Trigger: GGCCTGTACAACGAGCACACGGTGGACCGGGCCCCACTGCGCAACAAGTACTTCTTCGGCGAAGGCTACACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS TCA 72 bp AGGACTCGTATGACTTGCGCCAGTAGTTCTCAGAGCTaGAGCTACCCCTCCGCCGGTGTGTGGGCAGCAGCA +
Preference number: 6 (lower is better)
Translates to: RTRMTCASSSQS*SYPSAGVWAAA
Trigger: TGCTGCTGCCCACACACCGGCGGAGGGGTAGCTTCAGCTCTGAGAACTACTGGCGCAAGTCATACGAGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399138.5
ENST00000490106.1
ENST00000541285.1
CDS CCA 72 bp ATGCATGGGGTCACCAAAGGGCCTCCGGTGAAGGTGTaGGCACCATCAGACCAATTCTCTGGCCAGGCCAAG +
Preference number: 6 (lower is better)
Translates to: MHGVTKGPPVKV*APSDQFSGQAK
Trigger: CTTGGCCTGGCCAGAGAATTGGTCTGATGGTGCCCACACCTTCACCGGAGGCCCTTTGGTGACCCCATGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490106.1
CDS CAA 90 bp CTGCGCACCGGCAGGGAAAGCACTGGTTCCGACACCCGAATAGGCTaGAACTGGAACTTGCAGCCGAAGCACAGCGCAGAGTCGCTAAAG +
Preference number: 6 (lower is better)
Translates to: LRTGRESTGSDTRIG*NWNLQPKHSAESLK
Trigger: CTTTAGCGACTCTGCGCTGTGCTTCGGCTGCAAGTTCCAGTTCAAGCCTATTCGGGTGTCGGAACCAGTGCTTTCCCTGCCGGTGCGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS CCA 72 bp AGTCACGCTTCCCCTGCGCACCGGCAGGGAAAGCACTaGTTCCGACACCCGAATAGGCTTGAACTGGAACTT +
Preference number: 6 (lower is better)
Translates to: SHASPAHRQGKH*FRHPNRLELEL
Trigger: AAGTTCCAGTTCAAGCCTATTCGGGTGTCGGAACCAGTGCTTTCCCTGCCGGTGCGCAGGGGAAGCGTGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS CAA 72 bp GGCAGGGAAAGCACTGGTTCCGACACCCGAATAGGCTaGAACTGGAACTTGCAGCCGAAGCACAGCGCAGAG +
Preference number: 6 (lower is better)
Translates to: GRESTGSDTRIG*NWNLQPKHSAE
Trigger: CTCTGCGCTGTGCTTCGGCTGCAAGTTCCAGTTCAAGCCTATTCGGGTGTCGGAACCAGTGCTTTCCCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS TCA 72 bp AAGGAAACATGCATGGGGTCACCAAAGGGCCTCCGGTaGAGGTGTGGGCACCATCAGACCAATTCTCTGGCC +
Preference number: 6 (lower is better)
Translates to: KETCMGSPKGLR*RCGHHQTNSLA
Trigger: GGCCAGAGAATTGGTCTGATGGTGCCCACACCTTCACCGGAGGCCCTTTGGTGACCCCATGCATGTTTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490106.1
CDS CAA 90 bp AGGGAAAGCACTGGTTCCGACACCCGAATAGGCTTGAACTGGAACTaGCAGCCGAAGCACAGCGCAGAGTCGCTAAAGAAGGACACGGAC +
Preference number: 6 (lower is better)
Translates to: RESTGSDTRIGLNWN*QPKHSAESLKKDTD
Trigger: GTCCGTGTCCTTCTTTAGCGACTCTGCGCTGTGCTTCGGCTGCAAGTTCCAGTTCAAGCCTATTCGGGTGTCGGAACCAGTGCTTTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS CAA 90 bp CGGAGCTGCTCAGGGACTTTGTTTCCAACCGGGGTGCATCTAATCTaGTCCTGCAAAGGAAACATGCATGGGGTCACCAAAGGGCCTCCG +
Preference number: 6 (lower is better)
Translates to: RSCSGTLFPTGVHLI*SCKGNMHGVTKGPP
Trigger: CGGAGGCCCTTTGGTGACCCCATGCATGTTTCCTTTGCAGGACAAGATTAGATGCACCCCGGTTGGAAACAAAGTCCCTGAGCAGCTCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490106.1
CDS GCA 72 bp GGCGATCTGAAGCATAGCTGGGTGGTAACACGGAGCTaGTCAGGGACTTTGTTTCCAACCGGGGTGCATCTA +
Preference number: 6 (lower is better)
Translates to: GDLKHSWVVTRS*SGTLFPTGVHL
Trigger: TAGATGCACCCCGGTTGGAAACAAAGTCCCTGAGCAGCTCCGTGTTACCACCCAGCTATGCTTCAGATCGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399138.5
ENST00000490106.1
ENST00000541285.1
CDS CCA 72 bp GAAAGCACTGGTTCCGACACCCGAATAGGCTTGAACTaGAACTTGCAGCCGAAGCACAGCGCAGAGTCGCTA +
Preference number: 6 (lower is better)
Translates to: ESTGSDTRIGLN*NLQPKHSAESL
Trigger: TAGCGACTCTGCGCTGTGCTTCGGCTGCAAGTTCCAGTTCAAGCCTATTCGGGTGTCGGAACCAGTGCTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS CAA 72 bp ACTGGTTCCGACACCCGAATAGGCTTGAACTGGAACTaGCAGCCGAAGCACAGCGCAGAGTCGCTAAAGAAG +
Preference number: 6 (lower is better)
Translates to: TGSDTRIGLNWN*QPKHSAESLKK
Trigger: CTTCTTTAGCGACTCTGCGCTGTGCTTCGGCTGCAAGTTCCAGTTCAAGCCTATTCGGGTGTCGGAACCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399138.5
CDS CAA 90 bp GATCTGAAGCATAGCTGGGTGGTAACACGGAGCTGCTCAGGGACTTaGTTTCCAACCGGGGTGCATCTAATCTTGTCCTGCAAAGGAAAC +
Preference number: 6 (lower is better)
Translates to: DLKHSWVVTRSCSGT*FPTGVHLILSCKGN
Trigger: GTTTCCTTTGCAGGACAAGATTAGATGCACCCCGGTTGGAAACAAAGTCCCTGAGCAGCTCCGTGTTACCACCCAGCTATGCTTCAGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490106.1
CDS GCA 72 bp ACTTTGTTTCCAACCGGGGTGCATCTAATCTTGTCCTaGAAAGGAAACATGCATGGGGTCACCAAAGGGCCT +
Preference number: 6 (lower is better)
Translates to: TLFPTGVHLILS*KGNMHGVTKGP
Trigger: AGGCCCTTTGGTGACCCCATGCATGTTTCCTTTGCAGGACAAGATTAGATGCACCCCGGTTGGAAACAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490106.1
CDS CCA 72 bp AAGACCCTCCTCAAGTCCACCTTTAGGAGTAAGGAATaGGAACACTTCTGTCTGGAAACTCCCAATGACAGG +
Preference number: 6 (lower is better)
Translates to: KTLLKSTFRSKE*EHFCLETPNDR
Trigger: CCTGTCATTGGGAGTTTCCAGACAGAAGTGTTCCCATTCCTTACTCCTAAAGGTGGACTTGAGGAGGGTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490106.1
CDS CAA 72 bp TCAGGGACTTTGTTTCCAACCGGGGTGCATCTAATCTaGTCCTGCAAAGGAAACATGCATGGGGTCACCAAA +
Preference number: 6 (lower is better)
Translates to: SGTLFPTGVHLI*SCKGNMHGVTK
Trigger: TTTGGTGACCCCATGCATGTTTCCTTTGCAGGACAAGATTAGATGCACCCCGGTTGGAAACAAAGTCCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490106.1