Pregenerated sensors for ALKBH2 (Homo sapiens)
Ensembl gene IDs: ENSG00000189046Ensembl transcript IDs: ENST00000343075.7, ENST00000429722.3, ENST00000440112.2, ENST00000536242.1, ENST00000536358.1, ENST00000536720.1, ENST00000543444.1, ENST00000619381.4
Found 144 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCTGTTTGTTCAGGAGTTAATCACCTCTCACTTCCTACTCCGGGATaGGCTCCAGGATCCAGGAAGACCGAGTGCTGGCGCTATTCCACT | + |
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Preference number: 1 (lower is better) Translates to: AVCSGVNHLSLPTPG*APGSRKTECWRYST Trigger: AGTGGAATAGCGCCAGCACTCGGTCTTCCTGGATCCTGGAGCTCATCCCGGAGTAGGAAGTGAGAGGTGATTAACTCCTGAACAAACAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000543444.1 |
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| 3UTR TCA 90 bp | AGTGCTGGCGCTATTCCACTCTTAGAGCCCCAGTGTACTAAGAAATaGTTTGTACCAATGAACCAAATAGGGTGGAACCCTAAACACTTC | + |
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Preference number: 1 (lower is better) Translates to: SAGAIPLLEPQCTKK*FVPMNQIGWNPKHF Trigger: GAAGTGTTTAGGGTTCCACCCTATTTGGTTCATTGGTACAAATCATTTCTTAGTACACTGGGGCTCTAAGAGTGGAATAGCGCCAGCACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000543444.1 |
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| 3UTR-3UTR CCA 90 bp | CTCACTTCCTACTCCGGGATGAGCTCCAGGATCCAGGAAGACCGAGTGCTGGCGATGAACCAAATAGGGTaGAACCCTAAACACTTCCTT | + |
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Preference number: 2 (lower is better) Translates to: LTSYSGMSSRIQEDRVLAMNQIG*NPKHFL Trigger: AAGGAAGTGTTTAGGGTTCCACCCTATTTGGTTCAT...CGCCAGCACTCGGTCTTCCTGGATCCTGGAGCTCATCCCGGAGTAGGAAGTGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000543444.1 |
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| 3UTR-3UTR GCA 90 bp | AATTTTACGAAAAGTCAGATTCACCCGTGGAGCCAGAACCTTCTTTCTCACGGGAGACTGTGGTACCAGTaGGTGTTGGTCGGGTGGTTC | + |
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Preference number: 2 (lower is better) Translates to: NFTKSQIHPWSQNLLSHGRLWYQ*VLVGWF Trigger: GAACCACCCGACCAACACGCACTGGTACCACAGTCT...CCCGTGAGAAAGAAGGTTCTGGCTCCACGGGTGAATCTGACTTTTCGTAAAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000440112.2 ENST00000619381.4 |
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| 3UTR-3UTR GCA 90 bp | ATTTTACGAAAAGTCAGATTCACCCGTGGAGCCAGAACCTTCTTTCTCACGGGAAGACTGTGGTACCAGTaGGTGTTGGTCGGGTGGTTC | + |
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Preference number: 2 (lower is better) Translates to: ILRKVRFTRGARTFFLTGRLWYQ*VLVGWF Trigger: GAACCACCCGACCAACACGCACTGGTACCACAGTCT...TCCCGTGAGAAAGAAGGTTCTGGCTCCACGGGTGAATCTGACTTTTCGTAAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000440112.2 ENST00000619381.4 |
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| 3UTR-3UTR GCA 90 bp | ATTCAGCTGTTTGTTCAGGAGTTAATCACCTCTCACTTCCTACTCCGGGATGAGTCCAGGAAGACCGAGTaGTGGCGCTATTCCACTCTT | + |
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Preference number: 2 (lower is better) Translates to: IQLFVQELITSHFLLRDESRKTE*WRYSTL Trigger: AAGAGTGGAATAGCGCCAGCACTCGGTCTTCCTGGA...CTCATCCCGGAGTAGGAAGTGAGAGGTGATTAACTCCTGAACAAACAGCTGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000543444.1 |
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| 3UTR TCA 72 bp | TCAGGAGTTAATCACCTCTCACTTCCTACTCCGGGATaGGCTCCAGGATCCAGGAAGACCGAGTGCTGGCGC | + |
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Preference number: 3 (lower is better) Translates to: SGVNHLSLPTPG*APGSRKTECWR Trigger: GCGCCAGCACTCGGTCTTCCTGGATCCTGGAGCTCATCCCGGAGTAGGAAGTGAGAGGTGATTAACTCCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000543444.1 |
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| 3UTR-3UTR CAA 90 bp | TACTCCGGGATGAGCTCCAGGATCCAGGAAGACCGAGTGCTGGCGCTATTCCACAGAAGACTTGTAACATaGAGTCCACTAAACAGGGTG | + |
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Preference number: 3 (lower is better) Translates to: YSGMSSRIQEDRVLALFHRRLVT*SPLNRV Trigger: CACCCTGTTTAGTGGACTCAATGTTACAAGTCTTCT...GTGGAATAGCGCCAGCACTCGGTCTTCCTGGATCCTGGAGCTCATCCCGGAGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000543444.1 |
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| 3UTR TCA 72 bp | GCTATTCCACTCTTAGAGCCCCAGTGTACTAAGAAATaGTTTGTACCAATGAACCAAATAGGGTGGAACCCT | + |
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Preference number: 3 (lower is better) Translates to: AIPLLEPQCTKK*FVPMNQIGWNP Trigger: AGGGTTCCACCCTATTTGGTTCATTGGTACAAATCATTTCTTAGTACACTGGGGCTCTAAGAGTGGAATAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000543444.1 |
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| CDS-3UTR TCA 90 bp | TACTCCGGGATGAGCTCCAGGATCCAGGAAGACCGAGTGCTGGCGCTATTCCACCCAGCTAGGGCCTGCTaGGTGGCCTCCATTCCCTGG | + |
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Preference number: 4 (lower is better) Translates to: YSGMSSRIQEDRVLALFHPARAC*VASIPW Trigger: CCAGGGAATGGAGGCCACTCAGCAGGCCCTAGCTGG...GTGGAATAGCGCCAGCACTCGGTCTTCCTGGATCCTGGAGCTCATCCCGGAGTA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000543444.1 |
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| CDS-3UTR TCA 90 bp | ACCCGTGGAGCCAGAACCTTCTTTCTCACGGGAAGACTGTGGTACCAGTGCGTGCCAGCTAGGGCCTGCTaGGTGGCCTCCATTCCCTGG | + |
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Preference number: 4 (lower is better) Translates to: TRGARTFFLTGRLWYQCVPARAC*VASIPW Trigger: CCAGGGAATGGAGGCCACTCAGCAGGCCCTAGCTGG...CACGCACTGGTACCACAGTCTTCCCGTGAGAAAGAAGGTTCTGGCTCCACGGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000440112.2 ENST00000619381.4 |
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| CDS-3UTR TCA 90 bp | CTCACTTCCTACTCCGGGATGAGCTCCAGGATCCAGGAAGACCGAGTGCTGGCGGTCACCCCAGAGACGTaGTCCCGGATGCGCTCTAGA | + |
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Preference number: 4 (lower is better) Translates to: LTSYSGMSSRIQEDRVLAVTPET*SRMRSR Trigger: TCTAGAGCGCATCCGGGATCACGTCTCTGGGGTGAC...CGCCAGCACTCGGTCTTCCTGGATCCTGGAGCTCATCCCGGAGTAGGAAGTGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000543444.1 |
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| CDS-3UTR GCA 90 bp | CCCGTGGAGCCAGAACCTTCTTTCTCACGGGAAGACTGTGGTACCAGTGCGTGTCCCTCAGCCCGAATGTaGCGCCAGCTAGGGCCTGCT | + |
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Preference number: 4 (lower is better) Translates to: PVEPEPSFSREDCGTSACPSARM*RQLGPA Trigger: AGCAGGCCCTAGCTGGCGGCACATTCGGGCTGAGGG...ACACGCACTGGTACCACAGTCTTCCCGTGAGAAAGAAGGTTCTGGCTCCACGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000440112.2 ENST00000619381.4 |
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| CDS-3UTR CCA 90 bp | CGTGGAGCCAGAACCTTCTTTCTCACGGGAAGACTGTGGTACCAGTGCGTGTTGCTGGTGGCCTCGTGGTaGGAAAGACGCGCCCCAGCG | + |
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Preference number: 4 (lower is better) Translates to: RGARTFFLTGRLWYQCVLLVASW*ERRAPA Trigger: CGCTGGGGCGCGTCTTTCCCACCACGAGGCCACCAG...CAACACGCACTGGTACCACAGTCTTCCCGTGAGAAAGAAGGTTCTGGCTCCACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000619381.4 |
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| CDS-3UTR GCA 90 bp | CCAGAACCTTCTTTCTCACGGGAAGACTGTGGTACCAGTGCGTGTTGGTCGGGTCCCTCAGCCCGAATGTaGCGCCAGCTAGGGCCTGCT | + |
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Preference number: 4 (lower is better) Translates to: PEPSFSREDCGTSACWSGPSARM*RQLGPA Trigger: AGCAGGCCCTAGCTGGCGGCACATTCGGGCTGAGGG...ACCCGACCAACACGCACTGGTACCACAGTCTTCCCGTGAGAAAGAAGGTTCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000440112.2 ENST00000619381.4 |
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| CDS-3UTR TCA 90 bp | TCAGATTCACCCGTGGAGCCAGAACCTTCTTTCTCACGGGAAGACTGTGGTACCCCAGCTAGGGCCTGCTaGGTGGCCTCCATTCCCTGG | + |
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Preference number: 4 (lower is better) Translates to: SDSPVEPEPSFSREDCGTPARAC*VASIPW Trigger: CCAGGGAATGGAGGCCACTCAGCAGGCCCTAGCTGG...GGTACCACAGTCTTCCCGTGAGAAAGAAGGTTCTGGCTCCACGGGTGAATCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000440112.2 ENST00000619381.4 |
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| CDS-3UTR GCA 90 bp | TACTCCGGGATGAGCTCCAGGATCCAGGAAGACCGAGTGCTGGCGCTATTCCACAGCGTCGCCATACGTTaGCTGCTTCCTGGGCACACT | + |
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Preference number: 4 (lower is better) Translates to: YSGMSSRIQEDRVLALFHSVAIR*LLPGHT Trigger: AGTGTGCCCAGGAAGCAGGCAACGTATGGCGACGCT...GTGGAATAGCGCCAGCACTCGGTCTTCCTGGATCCTGGAGCTCATCCCGGAGTA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000543444.1 |
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| CDS-3UTR CCA 90 bp | CCAGGATCCAGGAAGACCGAGTGCTGGCGCTATTCCACTCTTAGAGCCCCAGTGACGTTGCCTGCTTCCTaGGCACACTGTGCCACTTCC | + |
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Preference number: 4 (lower is better) Translates to: PGSRKTECWRYSTLRAPVTLPAS*AHCATS Trigger: GGAAGTGGCACAGTGTGCCCAGGAAGCAGGCAACGT...CACTGGGGCTCTAAGAGTGGAATAGCGCCAGCACTCGGTCTTCCTGGATCCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000543444.1 |
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| CDS-3UTR GCA 90 bp | CCAGGATCCAGGAAGACCGAGTGCTGGCGCTATTCCACTCTTAGAGCCCCAGTGTTCCTGGGCACACTGTaGCACTTCCCGAATACCTGG | + |
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Preference number: 4 (lower is better) Translates to: PGSRKTECWRYSTLRAPVFLGTL*HFPNTW Trigger: CCAGGTATTCGGGAAGTGGCACAGTGTGCCCAGGAA...CACTGGGGCTCTAAGAGTGGAATAGCGCCAGCACTCGGTCTTCCTGGATCCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000543444.1 |
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| CDS-3UTR CCA 90 bp | GGAGCCAGAACCTTCTTTCTCACGGGAAGACTGTGGTACCAGTGCGTGTTGGTCATTAGTAAGCTCCCGTaGGCCAGCGGCAGCCTGACC | + |
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Preference number: 4 (lower is better) Translates to: GARTFFLTGRLWYQCVLVISKLP*ASGSLT Trigger: GGTCAGGCTGCCGCTGGCCCACGGGAGCTTACTAAT...GACCAACACGCACTGGTACCACAGTCTTCCCGTGAGAAAGAAGGTTCTGGCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000440112.2 ENST00000619381.4 |
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| CDS-3UTR TCA 90 bp | TACTCCGGGATGAGCTCCAGGATCCAGGAAGACCGAGTGCTGGCGCTATTCCACGCTTTGGAGACAGCGTaGGGCCTGAAAATGTGTAGG | + |
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Preference number: 4 (lower is better) Translates to: YSGMSSRIQEDRVLALFHALETA*GLKMCR Trigger: CCTACACATTTTCAGGCCTCACGCTGTCTCCAAAGC...GTGGAATAGCGCCAGCACTCGGTCTTCCTGGATCCTGGAGCTCATCCCGGAGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000543444.1 |
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| CDS-3UTR GCA 90 bp | ATTCACCCGTGGAGCCAGAACCTTCTTTCTCACGGGAAGACTGTGGTACCAGTGTGGGGGTGGCAAGAGTaGTCTAGCATCGCAGCTCCG | + |
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Preference number: 4 (lower is better) Translates to: IHPWSQNLLSHGKTVVPVWGWQE*SSIAAP Trigger: CGGAGCTGCGATGCTAGAGCACTCTTGCCACCCCCA...CACTGGTACCACAGTCTTCCCGTGAGAAAGAAGGTTCTGGCTCCACGGGTGAAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000619381.4 |
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| CDS-3UTR GCA 90 bp | CGTGGAGCCAGAACCTTCTTTCTCACGGGAAGACTGTGGTACCAGTGCGTGTTGGGCTCTTGCTCCTCCTaGTTCCTCAAAAGGCCCCCT | + |
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Preference number: 4 (lower is better) Translates to: RGARTFFLTGRLWYQCVLGSCSS*FLKRPP Trigger: AGGGGGCCTTTTGAGGAAGCAGGAGGAGCAAGAGCC...CAACACGCACTGGTACCACAGTCTTCCCGTGAGAAAGAAGGTTCTGGCTCCACG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000440112.2 ENST00000619381.4 |
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| CDS-3UTR GCA 90 bp | TACTCCGGGATGAGCTCCAGGATCCAGGAAGACCGAGTGCTGGCGCTATTCCACTCCAGGAAGACCGAGTaGTGGCGCTATTCCACTCTT | + |
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Preference number: 4 (lower is better) Translates to: YSGMSSRIQEDRVLALFHSRKTE*WRYSTL Trigger: AAGAGTGGAATAGCGCCAGCACTCGGTCTTCCTGGA...GTGGAATAGCGCCAGCACTCGGTCTTCCTGGATCCTGGAGCTCATCCCGGAGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000543444.1 |
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| CDS-3UTR CCA 90 bp | AGTCAGATTCACCCGTGGAGCCAGAACCTTCTTTCTCACGGGAAGACTGTGGTACCGCAGTCACCCTGGTaGCCTCGTGGTGGGAAAGAC | + |
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Preference number: 4 (lower is better) Translates to: SQIHPWSQNLLSHGKTVVPQSPW*PRGGKD Trigger: GTCTTTCCCACCACGAGGCCACCAGGGTGACTGCGG...TACCACAGTCTTCCCGTGAGAAAGAAGGTTCTGGCTCCACGGGTGAATCTGACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000619381.4 |
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| CDS-3UTR CCA 90 bp | TGGAGCCAGAACCTTCTTTCTCACGGGAAGACTGTGGTACCAGTGCGTGTTGGTATCCCGCAGTCACCCTaGTGGCCTCGTGGTGGGAAA | + |
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Preference number: 4 (lower is better) Translates to: WSQNLLSHGKTVVPVRVGIPQSP*WPRGGK Trigger: TTTCCCACCACGAGGCCACCAGGGTGACTGCGGGAT...ACCAACACGCACTGGTACCACAGTCTTCCCGTGAGAAAGAAGGTTCTGGCTCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000619381.4 |
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| CDS-3UTR CCA 90 bp | CCCGTGGAGCCAGAACCTTCTTTCTCACGGGAAGACTGTGGTACCAGTGCGTGTCTCACGGGAAGACTGTaGTACCAGTGCGTGTTGGTC | + |
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Preference number: 4 (lower is better) Translates to: PVEPEPSFSREDCGTSACLTGRL*YQCVLV Trigger: GACCAACACGCACTGGTACCACAGTCTTCCCGTGAG...ACACGCACTGGTACCACAGTCTTCCCGTGAGAAAGAAGGTTCTGGCTCCACGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000440112.2 ENST00000619381.4 |
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| CDS-3UTR GCA 90 bp | GATTCACCCGTGGAGCCAGAACCTTCTTTCTCACGGGAAGACTGTGGTACCAGTGGCTCTTGCTCCTCCTaGTTCCTCAAAAGGCCCCCT | + |
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Preference number: 4 (lower is better) Translates to: DSPVEPEPSFSREDCGTSGSCSS*FLKRPP Trigger: AGGGGGCCTTTTGAGGAAGCAGGAGGAGCAAGAGCC...ACTGGTACCACAGTCTTCCCGTGAGAAAGAAGGTTCTGGCTCCACGGGTGAATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000440112.2 ENST00000619381.4 |
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| CDS-3UTR CCA 90 bp | AAGTCAGATTCACCCGTGGAGCCAGAACCTTCTTTCTCACGGGAAGACTGTGGTACTGCAACACGTCCGTaGGGTGGGGGTGGCAAGAGT | + |
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Preference number: 4 (lower is better) Translates to: KSDSPVEPEPSFSREDCGTATRP*GGGGKS Trigger: ACTCTTGCCACCCCCACCCCACGGACGTGTTGCAGT...ACCACAGTCTTCCCGTGAGAAAGAAGGTTCTGGCTCCACGGGTGAATCTGACTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000619381.4 |
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| CDS-3UTR GCA 90 bp | ATTCAGCTGTTTGTTCAGGAGTTAATCACCTCTCACTTCCTACTCCGGGATGAGCCCTCAGCCCGAATGTaGCGCCAGCTAGGGCCTGCT | + |
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Preference number: 4 (lower is better) Translates to: IQLFVQELITSHFLLRDEPSARM*RQLGPA Trigger: AGCAGGCCCTAGCTGGCGGCACATTCGGGCTGAGGG...CTCATCCCGGAGTAGGAAGTGAGAGGTGATTAACTCCTGAACAAACAGCTGAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000543444.1 |
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| CDS-3UTR GCA 90 bp | TTCACCCGTGGAGCCAGAACCTTCTTTCTCACGGGAAGACTGTGGTACCAGTGCCTTTCATCATCTCGGTaGTCCCCGATGTGGTCACAG | + |
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Preference number: 4 (lower is better) Translates to: FTRGARTFFLTGRLWYQCLSSSR*SPMWSQ Trigger: CTGTGACCACATCGGGGAGCACCGAGATGATGAAAG...GCACTGGTACCACAGTCTTCCCGTGAGAAAGAAGGTTCTGGCTCCACGGGTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000440112.2 ENST00000619381.4 |
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| CDS-3UTR GCA 90 bp | CGTGGAGCCAGAACCTTCTTTCTCACGGGAAGACTGTGGTACCAGTGCGTGTTGGGAAGACAAAGTCTCTaGAGGCACCGAAGGAGACAG | + |
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Preference number: 4 (lower is better) Translates to: RGARTFFLTGRLWYQCVLGRQSL*RHRRRQ Trigger: CTGTCTCCTTCGGTGCCTGCAGAGACTTTGTCTTCC...CAACACGCACTGGTACCACAGTCTTCCCGTGAGAAAGAAGGTTCTGGCTCCACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000440112.2 ENST00000619381.4 |
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| CDS-3UTR GCA 90 bp | CTTCTTTCTCACGGGAAGACTGTGGTACCAGTGCGTGTTGGTCGGGTGGTTCATAGACTGTGGTACCAGTaGGTGTTGGTCGGGTGGTTC | + |
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Preference number: 4 (lower is better) Translates to: LLSHGKTVVPVRVGRVVHRLWYQ*VLVGWF Trigger: GAACCACCCGACCAACACGCACTGGTACCACAGTCT...ATGAACCACCCGACCAACACGCACTGGTACCACAGTCTTCCCGTGAGAAAGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000440112.2 ENST00000619381.4 |
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| CDS-3UTR CCA 90 bp | TACGAAAAGTCAGATTCACCCGTGGAGCCAGAACCTTCTTTCTCACGGGAAGACAACACGTCCGTGGGGTaGGGGTGGCAAGAGTGCTCT | + |
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Preference number: 4 (lower is better) Translates to: YEKSDSPVEPEPSFSREDNTSVG*GWQECS Trigger: AGAGCACTCTTGCCACCCCCACCCCACGGACGTGTT...GTCTTCCCGTGAGAAAGAAGGTTCTGGCTCCACGGGTGAATCTGACTTTTCGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000619381.4 |
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| CDS-3UTR CCA 90 bp | GAAAAGTCAGATTCACCCGTGGAGCCAGAACCTTCTTTCTCACGGGAAGACTGTATTAGTAAGCTCCCGTaGGCCAGCGGCAGCCTGACC | + |
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Preference number: 4 (lower is better) Translates to: EKSDSPVEPEPSFSREDCISKLP*ASGSLT Trigger: GGTCAGGCTGCCGCTGGCCCACGGGAGCTTACTAAT...ACAGTCTTCCCGTGAGAAAGAAGGTTCTGGCTCCACGGGTGAATCTGACTTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000440112.2 ENST00000619381.4 |
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| CDS-3UTR CCA 90 bp | TTTTACGAAAAGTCAGATTCACCCGTGGAGCCAGAACCTTCTTTCTCACGGGAAACCCTGGTGGCCTCGTaGTGGGAAAGACGCGCCCCA | + |
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Preference number: 4 (lower is better) Translates to: FYEKSDSPVEPEPSFSRETLVAS*WERRAP Trigger: TGGGGCGCGTCTTTCCCACCACGAGGCCACCAGGGT...TTCCCGTGAGAAAGAAGGTTCTGGCTCCACGGGTGAATCTGACTTTTCGTAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000619381.4 |
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| CDS-3UTR GCA 90 bp | TACTCCGGGATGAGCTCCAGGATCCAGGAAGACCGAGTGCTGGCGCTATTCCACCTGGACTCTGGCCAGTaGTCCTGTAAAATATTCTAC | + |
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Preference number: 4 (lower is better) Translates to: YSGMSSRIQEDRVLALFHLDSGQ*SCKIFY Trigger: GTAGAATATTTTACAGGAGCACTGGCCAGAGTCCAG...GTGGAATAGCGCCAGCACTCGGTCTTCCTGGATCCTGGAGCTCATCCCGGAGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000543444.1 |
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| CDS-3UTR GCA 90 bp | CGAAAAGTCAGATTCACCCGTGGAGCCAGAACCTTCTTTCTCACGGGAAGACTGAGACTGTGGTACCAGTaGGTGTTGGTCGGGTGGTTC | + |
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Preference number: 4 (lower is better) Translates to: RKVRFTRGARTFFLTGRLRLWYQ*VLVGWF Trigger: GAACCACCCGACCAACACGCACTGGTACCACAGTCT...CAGTCTTCCCGTGAGAAAGAAGGTTCTGGCTCCACGGGTGAATCTGACTTTTCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000440112.2 ENST00000619381.4 |
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| CDS-3UTR CCA 90 bp | GTCAGATTCACCCGTGGAGCCAGAACCTTCTTTCTCACGGGAAGACTGTGGTACCGGTGCTCCCCGATGTaGTCACAGCCATCTTTATAC | + |
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Preference number: 4 (lower is better) Translates to: VRFTRGARTFFLTGRLWYRCSPM*SQPSLY Trigger: GTATAAAGATGGCTGTGACCACATCGGGGAGCACCG...GTACCACAGTCTTCCCGTGAGAAAGAAGGTTCTGGCTCCACGGGTGAATCTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000440112.2 ENST00000619381.4 |
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| CDS-3UTR CCA 90 bp | CACCCGTGGAGCCAGAACCTTCTTTCTCACGGGAAGACTGTGGTACCAGTGCGTTGCGTGTTGGTCGGGTaGTTCATCATTAGTAAGCTC | + |
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Preference number: 4 (lower is better) Translates to: HPWSQNLLSHGKTVVPVRCVLVG*FIISKL Trigger: GAGCTTACTAATGATGAACCACCCGACCAACACGCA...ACGCACTGGTACCACAGTCTTCCCGTGAGAAAGAAGGTTCTGGCTCCACGGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000440112.2 ENST00000619381.4 |
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| CDS-3UTR CCA 90 bp | AGCCAGAACCTTCTTTCTCACGGGAAGACTGTGGTACCAGTGCGTGTTGGTCGGGGTACCAGTGCGTGTTaGTCGGGTGGTTCATCATTA | + |
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Preference number: 4 (lower is better) Translates to: SQNLLSHGKTVVPVRVGRGTSAC*SGGSSL Trigger: TAATGATGAACCACCCGACCAACACGCACTGGTACC...CCGACCAACACGCACTGGTACCACAGTCTTCCCGTGAGAAAGAAGGTTCTGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000440112.2 ENST00000619381.4 |
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| CDS-3UTR CCA 90 bp | GCCAGAACCTTCTTTCTCACGGGAAGACTGTGGTACCAGTGCGTGTTGGTCGGGAGTCAGATTCACCCGTaGAGCCAGAACCTTCTTTCT | + |
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Preference number: 4 (lower is better) Translates to: ARTFFLTGRLWYQCVLVGSQIHP*SQNLLS Trigger: AGAAAGAAGGTTCTGGCTCCACGGGTGAATCTGACT...CCCGACCAACACGCACTGGTACCACAGTCTTCCCGTGAGAAAGAAGGTTCTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000440112.2 ENST00000619381.4 |
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| CDS-3UTR CCA 90 bp | CACCCGTGGAGCCAGAACCTTCTTTCTCACGGGAAGACTGTGGTACCAGTGCGTAGTCAGATTCACCCGTaGAGCCAGAACCTTCTTTCT | + |
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Preference number: 4 (lower is better) Translates to: HPWSQNLLSHGKTVVPVRSQIHP*SQNLLS Trigger: AGAAAGAAGGTTCTGGCTCCACGGGTGAATCTGACT...ACGCACTGGTACCACAGTCTTCCCGTGAGAAAGAAGGTTCTGGCTCCACGGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000440112.2 ENST00000619381.4 |
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| CDS-3UTR CCA 90 bp | TTCACCCGTGGAGCCAGAACCTTCTTTCTCACGGGAAGACTGTGGTACCAGTGCAAGAAGGGACGTCAGTaGCGAGGCCAAGACAGAAAT | + |
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Preference number: 4 (lower is better) Translates to: FTRGARTFFLTGRLWYQCKKGRQ*RGQDRN Trigger: ATTTCTGTCTTGGCCTCGCCACTGACGTCCCTTCTT...GCACTGGTACCACAGTCTTCCCGTGAGAAAGAAGGTTCTGGCTCCACGGGTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000619381.4 |
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| CDS-3UTR TCA 90 bp | GTTCAGGAGTTAATCACCTCTCACTTCCTACTCCGGGATGAGCTCCAGGATCCATTGAGCCTAGCAGTTTaGGACCAAGCCTGGGCAACA | + |
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Preference number: 4 (lower is better) Translates to: VQELITSHFLLRDELQDPLSLAV*DQAWAT Trigger: TGTTGCCCAGGCTTGGTCTCAAACTGCTAGGCTCAA...TGGATCCTGGAGCTCATCCCGGAGTAGGAAGTGAGAGGTGATTAACTCCTGAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000543444.1 |
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| CDS-3UTR GCA 90 bp | CCAGAACCTTCTTTCTCACGGGAAGACTGTGGTACCAGTGCGTGTTGGTCGGGTCATCTGCCTCAGCTTTaGCAAACAGGACTGTGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: PEPSFSREDCGTSACWSGHLPQL*QTGLCN Trigger: GTTACACAGTCCTGTTTGGCAAAGCTGAGGCAGATG...ACCCGACCAACACGCACTGGTACCACAGTCTTCCCGTGAGAAAGAAGGTTCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000440112.2 ENST00000619381.4 |
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| CDS-3UTR GCA 90 bp | CGAAAAGTCAGATTCACCCGTGGAGCCAGAACCTTCTTTCTCACGGGAAGACTGCTTTCATCATCTCGGTaGTCCCCGATGTGGTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: RKVRFTRGARTFFLTGRLLSSSR*SPMWSQ Trigger: CTGTGACCACATCGGGGAGCACCGAGATGATGAAAG...CAGTCTTCCCGTGAGAAAGAAGGTTCTGGCTCCACGGGTGAATCTGACTTTTCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000440112.2 ENST00000619381.4 |
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| CDS-3UTR TCA 90 bp | ACCTTCTTTCTCACGGGAAGACTGTGGTACCAGTGCGTGTTGGTCGGGTGGTTCCATGTCGCAAAATTCTaGTATCACTGCAACACGTCC | + |
|
Preference number: 4 (lower is better) Translates to: TFFLTGRLWYQCVLVGWFHVAKF*YHCNTS Trigger: GGACGTGTTGCAGTGATATCAGAATTTTGCGACATG...GAACCACCCGACCAACACGCACTGGTACCACAGTCTTCCCGTGAGAAAGAAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000619381.4 |
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| CDS-3UTR GCA 90 bp | TCTTTCTCACGGGAAGACTGTGGTACCAGTGCGTGTTGGTCGGGTGGTTCATCACATCTGCCTCAGCTTTaGCAAACAGGACTGTGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: SFSREDCGTSACWSGGSSHLPQL*QTGLCN Trigger: GTTACACAGTCCTGTTTGGCAAAGCTGAGGCAGATG...TGATGAACCACCCGACCAACACGCACTGGTACCACAGTCTTCCCGTGAGAAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000440112.2 ENST00000619381.4 |
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| CDS-3UTR GCA 90 bp | ATTCAGCTGTTTGTTCAGGAGTTAATCACCTCTCACTTCCTACTCCGGGATGAGTCGCCATACGTTGCCTaGTTCCTGGGCACACTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: IQLFVQELITSHFLLRDESPYVA*FLGTLC Trigger: GCACAGTGTGCCCAGGAAGCAGGCAACGTATGGCGA...CTCATCCCGGAGTAGGAAGTGAGAGGTGATTAACTCCTGAACAAACAGCTGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000543444.1 |
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| CDS-3UTR CCA 90 bp | GAAAAGTCAGATTCACCCGTGGAGCCAGAACCTTCTTTCTCACGGGAAGACTGTCGGTGCTCCCCGATGTaGTCACAGCCATCTTTATAC | + |
|
Preference number: 4 (lower is better) Translates to: EKSDSPVEPEPSFSREDCRCSPM*SQPSLY Trigger: GTATAAAGATGGCTGTGACCACATCGGGGAGCACCG...ACAGTCTTCCCGTGAGAAAGAAGGTTCTGGCTCCACGGGTGAATCTGACTTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000440112.2 ENST00000619381.4 |
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| CDS-3UTR CCA 90 bp | AGATTCACCCGTGGAGCCAGAACCTTCTTTCTCACGGGAAGACTGTGGTACCAGTGCGTGTTGGTCGGGTaGTTCATCATTAGTAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: RFTRGARTFFLTGRLWYQCVLVG*FIISKL Trigger: GAGCTTACTAATGATGAACCACCCGACCAACACGCA...CTGGTACCACAGTCTTCCCGTGAGAAAGAAGGTTCTGGCTCCACGGGTGAATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000440112.2 ENST00000619381.4 |
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| CDS-3UTR CCA 90 bp | TACTCCGGGATGAGCTCCAGGATCCAGGAAGACCGAGTGCTGGCGCTATTCCACATGAACCAAATAGGGTaGAACCCTAAACACTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: YSGMSSRIQEDRVLALFHMNQIG*NPKHFL Trigger: AAGGAAGTGTTTAGGGTTCCACCCTATTTGGTTCAT...GTGGAATAGCGCCAGCACTCGGTCTTCCTGGATCCTGGAGCTCATCCCGGAGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000543444.1 |
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| CDS-3UTR GCA 90 bp | GAAAAGTCAGATTCACCCGTGGAGCCAGAACCTTCTTTCTCACGGGAAGACTGTTCTCCAGTTGGCTCTTaGTCCTCCTGCTTCCTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: EKSDSPVEPEPSFSREDCSPVGS*SSCFLK Trigger: TTTGAGGAAGCAGGAGGAGCAAGAGCCAACTGGAGA...ACAGTCTTCCCGTGAGAAAGAAGGTTCTGGCTCCACGGGTGAATCTGACTTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000440112.2 ENST00000619381.4 |
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| CDS-3UTR GCA 90 bp | ATTTTACGAAAAGTCAGATTCACCCGTGGAGCCAGAACCTTCTTTCTCACGGGAGGAAGACAAAGTCTCTaGAGGCACCGAAGGAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: ILRKVRFTRGARTFFLTGGRQSL*RHRRRQ Trigger: CTGTCTCCTTCGGTGCCTGCAGAGACTTTGTCTTCC...TCCCGTGAGAAAGAAGGTTCTGGCTCCACGGGTGAATCTGACTTTTCGTAAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000440112.2 ENST00000619381.4 |
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| CDS-3UTR CCA 90 bp | AAATTTTACGAAAAGTCAGATTCACCCGTGGAGCCAGAACCTTCTTTCTCACGGCTCACGGGAAGACTGTaGTACCAGTGCGTGTTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: KFYEKSDSPVEPEPSFSRLTGRL*YQCVLV Trigger: GACCAACACGCACTGGTACCACAGTCTTCCCGTGAG...CCGTGAGAAAGAAGGTTCTGGCTCCACGGGTGAATCTGACTTTTCGTAAAATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000440112.2 ENST00000619381.4 |
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| CDS-3UTR GCA 90 bp | AGCCAGAACCTTCTTTCTCACGGGAAGACTGTGGTACCAGTGCGTGTTGGTCGGAAGTTCTATCCCCAGTaGAAAAATCTGTTTGTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SQNLLSHGKTVVPVRVGRKFYPQ*KNLFVQ Trigger: TTGGACAAACAGATTTTTGCACTGGGGATAGAACTT...CCGACCAACACGCACTGGTACCACAGTCTTCCCGTGAGAAAGAAGGTTCTGGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000619381.4 |
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| CDS-3UTR CCA 90 bp | ATTTTACGAAAAGTCAGATTCACCCGTGGAGCCAGAACCTTCTTTCTCACGGGAGGTACCAGTGCGTGTTaGTCGGGTGGTTCATCATTA | + |
|
Preference number: 4 (lower is better) Translates to: ILRKVRFTRGARTFFLTGGTSAC*SGGSSL Trigger: TAATGATGAACCACCCGACCAACACGCACTGGTACC...TCCCGTGAGAAAGAAGGTTCTGGCTCCACGGGTGAATCTGACTTTTCGTAAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000440112.2 ENST00000619381.4 |
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| CDS-3UTR CCA 90 bp | ATTCAGCTGTTTGTTCAGGAGTTAATCACCTCTCACTTCCTACTCCGGGATGAGAGGAAGACCGAGTGCTaGCGCTATTCCACTCTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: IQLFVQELITSHFLLRDERKTEC*RYSTLR Trigger: TCTAAGAGTGGAATAGCGCCAGCACTCGGTCTTCCT...CTCATCCCGGAGTAGGAAGTGAGAGGTGATTAACTCCTGAACAAACAGCTGAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000543444.1 |
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| CDS-3UTR CCA 90 bp | AGTCAGATTCACCCGTGGAGCCAGAACCTTCTTTCTCACGGGAAGACTGTGGTATCTTTCTCCAACTCTTaGAAAATCTCATCTGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SQIHPWSQNLLSHGKTVVSFSNS*KISSAS Trigger: TGAGGCAGATGAGATTTTCCAAGAGTTGGAGAAAGA...TACCACAGTCTTCCCGTGAGAAAGAAGGTTCTGGCTCCACGGGTGAATCTGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000440112.2 ENST00000619381.4 |
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| CDS-3UTR TCA 90 bp | AAGAAATTATCTCATTCAGCTGTTTGTTCAGGAGTTAATCACCTCTCACTTCCTAGACAGCGTGAGGCCTaGAAATGTGTAGGTCAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: KKLSHSAVCSGVNHLSLPRQREA*KCVGQP Trigger: GGGCTGACCTACACATTTTCAGGCCTCACGCTGTCT...AGGAAGTGAGAGGTGATTAACTCCTGAACAAACAGCTGAATGAGATAATTTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000543444.1 |
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| CDS-3UTR GCA 90 bp | AAGAAATTATCTCATTCAGCTGTTTGTTCAGGAGTTAATCACCTCTCACTTCCTTCTCCAGTTGGCTCTTaGTCCTCCTGCTTCCTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: KKLSHSAVCSGVNHLSLPSPVGS*SSCFLK Trigger: TTTGAGGAAGCAGGAGGAGCAAGAGCCAACTGGAGA...AGGAAGTGAGAGGTGATTAACTCCTGAACAAACAGCTGAATGAGATAATTTCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000543444.1 |
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| CDS-3UTR GCA 90 bp | AAGAAATTATCTCATTCAGCTGTTTGTTCAGGAGTTAATCACCTCTCACTTCCTCATCTGCCTCAGCTTTaGCAAACAGGACTGTGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: KKLSHSAVCSGVNHLSLPHLPQL*QTGLCN Trigger: GTTACACAGTCCTGTTTGGCAAAGCTGAGGCAGATG...AGGAAGTGAGAGGTGATTAACTCCTGAACAAACAGCTGAATGAGATAATTTCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000543444.1 |
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| CDS CCA 90 bp | AAAGACGCGCCCCAGCGAATCGGTCGCGTCACTTCCGGAGCACGCTaGGAACTACGGCAGGCTAGGGCGCAAAGAGAGCAGCCGGGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: KDAPQRIGRVTSGAR*ELRQARAQREQPGG Trigger: GCCGCCCGGCTGCTCTCTTTGCGCCCTAGCCTGCCGTAGTTCCCAGCGTGCTCCGGAAGTGACGCGACCGATTCGCTGGGGCGCGTCTTT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000536720.1 |
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| CDS CCA 90 bp | TCCGGCGCAGATCGGAATCCCGCAGTCACCCTGGTGGCCTCGTGGTaGGAAAGACGCGCCCCAGCGAATCGGTCGCGTCACTTCCGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SGADRNPAVTLVASW*ERRAPANRSRHFRS Trigger: GCTCCGGAAGTGACGCGACCGATTCGCTGGGGCGCGTCTTTCCCACCACGAGGCCACCAGGGTGACTGCGGGATTCCGATCTGCGCCGGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000536720.1 |
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| CDS CCA 90 bp | AGCTCCGGCGCAGATCGGAATCCCGCAGTCACCCTGGTGGCCTCGTaGTGGGAAAGACGCGCCCCAGCGAATCGGTCGCGTCACTTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: SSGADRNPAVTLVAS*WERRAPANRSRHFR Trigger: CCGGAAGTGACGCGACCGATTCGCTGGGGCGCGTCTTTCCCACCACGAGGCCACCAGGGTGACTGCGGGATTCCGATCTGCGCCGGAGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000536720.1 |
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| CDS CCA 90 bp | AGCATCGCAGCTCCGGCGCAGATCGGAATCCCGCAGTCACCCTGGTaGCCTCGTGGTGGGAAAGACGCGCCCCAGCGAATCGGTCGCGTC | + |
|
Preference number: 5 (lower is better) Translates to: SIAAPAQIGIPQSPW*PRGGKDAPQRIGRV Trigger: GACGCGACCGATTCGCTGGGGCGCGTCTTTCCCACCACGAGGCCACCAGGGTGACTGCGGGATTCCGATCTGCGCCGGAGCTGCGATGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000536720.1 |
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| CDS CCA 90 bp | TCTAGCATCGCAGCTCCGGCGCAGATCGGAATCCCGCAGTCACCCTaGTGGCCTCGTGGTGGGAAAGACGCGCCCCAGCGAATCGGTCGC | + |
|
Preference number: 5 (lower is better) Translates to: SSIAAPAQIGIPQSP*WPRGGKDAPQRIGR Trigger: GCGACCGATTCGCTGGGGCGCGTCTTTCCCACCACGAGGCCACCAGGGTGACTGCGGGATTCCGATCTGCGCCGGAGCTGCGATGCTAGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000536720.1 |
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| CDS TCA 90 bp | TCGGGTGGTTCATCATTAGTAAGCTCCCGTGGGCCAGCGGCAGCCTaGCCACCGCCACCCTCCTGGAGGGGCTTTTCCCACGGGAATCCT | + |
|
Preference number: 5 (lower is better) Translates to: SGGSSLVSSRGPAAA*PPPPSWRGFSHGNP Trigger: AGGATTCCCGTGGGAAAAGCCCCTCCAGGAGGGTGGCGGTGGTCAGGCTGCCGCTGGCCCACGGGAGCTTACTAATGATGAACCACCCGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000343075.7 ENST00000429722.3 ENST00000440112.2 ENST00000619381.4 |
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| CDS CCA 90 bp | TACCAGTGCGTGTTGGTCGGGTGGTTCATCATTAGTAAGCTCCCGTaGGCCAGCGGCAGCCTGACCACCGCCACCCTCCTGGAGGGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: YQCVLVGWFIISKLP*ASGSLTTATLLEGL Trigger: AAGCCCCTCCAGGAGGGTGGCGGTGGTCAGGCTGCCGCTGGCCCACGGGAGCTTACTAATGATGAACCACCCGACCAACACGCACTGGTA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000343075.7 ENST00000429722.3 ENST00000440112.2 ENST00000619381.4 |
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| CDS-3UTR CAA 90 bp | CTCACTTCCTACTCCGGGATGAGCTCCAGGATCCAGGAAGACCGAGTGCTGGCGCAGCGTCGCCATACGTaGCCTGCTTCCTGGGCACAC | + |
|
Preference number: 5 (lower is better) Translates to: LTSYSGMSSRIQEDRVLAQRRHT*PASWAH Trigger: GTGTGCCCAGGAAGCAGGCAACGTATGGCGACGCTG...CGCCAGCACTCGGTCTTCCTGGATCCTGGAGCTCATCCCGGAGTAGGAAGTGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000543444.1 |
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| CDS GCA 90 bp | ACCACCGCCACCCTCCTGGAGGGGCTTTTCCCACGGGAATCCTTATaGCGGAAGACAAAGTCTCTGCAGGCACCGAAGGAGACAGAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: TTATLLEGLFPRESL*RKTKSLQAPKETEA Trigger: TGCCTCTGTCTCCTTCGGTGCCTGCAGAGACTTTGTCTTCCGGCATAAGGATTCCCGTGGGAAAAGCCCCTCCAGGAGGGTGGCGGTGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000343075.7 ENST00000429722.3 ENST00000440112.2 ENST00000619381.4 |
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| CDS CCA 90 bp | CGGGTAAACCGCACGCAAAATTCTGATATCACTGCAACACGTCCGTaGGGTGGGGGTGGCAAGAGTGCTCTAGCATCGCAGCTCCGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: RVNRTQNSDITATRP*GGGGKSALASQLRR Trigger: GCGCCGGAGCTGCGATGCTAGAGCACTCTTGCCACCCCCACCCCACGGACGTGTTGCAGTGATATCAGAATTTTGCGTGCGGTTTACCCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000343075.7 ENST00000429722.3 ENST00000536358.1 ENST00000536720.1 |
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| CDS TCA 90 bp | CCCGGATGCGCTCTAGAACTGGGATCCAGGGCTTTGGAGACAGCGTaGGGCCTGAAAATGTGTAGGTCAGCCCAGCGTCGCCATACGTTG | + |
|
Preference number: 5 (lower is better) Translates to: PGCALELGSRALETA*GLKMCRSAQRRHTL Trigger: CAACGTATGGCGACGCTGGGCTGACCTACACATTTTCAGGCCTCACGCTGTCTCCAAAGCCCTGGATCCCAGTTCTAGAGCGCATCCGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000343075.7 ENST00000429722.3 ENST00000536242.1 ENST00000543444.1 |
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| CDS GCA 90 bp | GTCAGCCCAGCGTCGCCATACGTTGCCTGCTTCCTGGGCACACTGTaGCACTTCCCGAATACCTGGACTCTGGCCAGTGCTCCTGTAAAA | + |
|
Preference number: 5 (lower is better) Translates to: VSPASPYVACFLGTL*HFPNTWTLASAPVK Trigger: TTTTACAGGAGCACTGGCCAGAGTCCAGGTATTCGGGAAGTGGCACAGTGTGCCCAGGAAGCAGGCAACGTATGGCGACGCTGGGCTGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000343075.7 ENST00000429722.3 ENST00000536242.1 ENST00000536358.1 ENST00000543444.1 |
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| CDS-3UTR CAA 90 bp | TACTCCGGGATGAGCTCCAGGATCCAGGAAGACCGAGTGCTGGCGCTATTCCACCTGGCTCTTCTCCAGTaGGCTCTTGCTCCTCCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: YSGMSSRIQEDRVLALFHLALLQ*ALAPPA Trigger: AGCAGGAGGAGCAAGAGCCAACTGGAGAAGAGCCAG...GTGGAATAGCGCCAGCACTCGGTCTTCCTGGATCCTGGAGCTCATCCCGGAGTA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000543444.1 |
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| CDS-3UTR CAA 90 bp | CTCACTTCCTACTCCGGGATGAGCTCCAGGATCCAGGAAGACCGAGTGCTGGCGCTTGAGCCTAGCAGTTaGAGACCAAGCCTGGGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: LTSYSGMSSRIQEDRVLALEPSS*RPSLGN Trigger: GTTGCCCAGGCTTGGTCTCAAACTGCTAGGCTCAAG...CGCCAGCACTCGGTCTTCCTGGATCCTGGAGCTCATCCCGGAGTAGGAAGTGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000543444.1 |
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| CDS CCA 90 bp | AAAATGTGTAGGTCAGCCCAGCGTCGCCATACGTTGCCTGCTTCCTaGGCACACTGTGCCACTTCCCGAATACCTGGACTCTGGCCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: KMCRSAQRRHTLPAS*AHCATSRIPGLWPV Trigger: CACTGGCCAGAGTCCAGGTATTCGGGAAGTGGCACAGTGTGCCCAGGAAGCAGGCAACGTATGGCGACGCTGGGCTGACCTACACATTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000343075.7 ENST00000429722.3 ENST00000536242.1 ENST00000543444.1 |
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| CDS CCA 90 bp | TTCTTTCTCACGGGAAGACTGTGGTACCAGTGCGTGTTGGTCGGGTaGTTCATCATTAGTAAGCTCCCGTGGGCCAGCGGCAGCCTGACC | + |
|
Preference number: 5 (lower is better) Translates to: FFLTGRLWYQCVLVG*FIISKLPWASGSLT Trigger: GGTCAGGCTGCCGCTGGCCCACGGGAGCTTACTAATGATGAACCACCCGACCAACACGCACTGGTACCACAGTCTTCCCGTGAGAAAGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000343075.7 ENST00000429722.3 ENST00000440112.2 ENST00000619381.4 |
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| CDS CCA 90 bp | GGAATCTGTCCATCGCAAAATTCTGATATCACTGCAACACGTCCGTaGGGTGGGGGTGGCAAGAGTGCTCTAGCATCGCAGCTCCGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: GICPSQNSDITATRP*GGGGKSALASQLRR Trigger: GCGCCGGAGCTGCGATGCTAGAGCACTCTTGCCACCCCCACCCCACGGACGTGTTGCAGTGATATCAGAATTTTGCGATGGACAGATTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000536242.1 |
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| CDS GCA 90 bp | CGTGGAGCCAGAACCTTCTTTCTCACGGGAAGACTGTGGTACCAGTaGGTGTTGGTCGGGTGGTTCATCATTAGTAAGCTCCCGTGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: RGARTFFLTGRLWYQ*VLVGWFIISKLPWA Trigger: GGCCCACGGGAGCTTACTAATGATGAACCACCCGACCAACACGCACTGGTACCACAGTCTTCCCGTGAGAAAGAAGGTTCTGGCTCCACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000343075.7 ENST00000429722.3 ENST00000440112.2 ENST00000619381.4 |
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| CDS CCA 90 bp | CCAGAACCTTCTTTCTCACGGGAAGACTGTGGTACCAGTGCGTGTTaGTCGGGTGGTTCATCATTAGTAAGCTCCCGTGGGCCAGCGGCA | + |
|
Preference number: 5 (lower is better) Translates to: PEPSFSREDCGTSAC*SGGSSLVSSRGPAA Trigger: TGCCGCTGGCCCACGGGAGCTTACTAATGATGAACCACCCGACCAACACGCACTGGTACCACAGTCTTCCCGTGAGAAAGAAGGTTCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000343075.7 ENST00000429722.3 ENST00000440112.2 ENST00000619381.4 |
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| CDS-3UTR CAA 90 bp | GGAGCCAGAACCTTCTTTCTCACGGGAAGACTGTGGTACCAGTGCGTGTTGGTCCTGGCTCTTCTCCAGTaGGCTCTTGCTCCTCCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: GARTFFLTGRLWYQCVLVLALLQ*ALAPPA Trigger: AGCAGGAGGAGCAAGAGCCAACTGGAGAAGAGCCAG...GACCAACACGCACTGGTACCACAGTCTTCCCGTGAGAAAGAAGGTTCTGGCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000440112.2 ENST00000619381.4 |
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| CDS TCA 90 bp | TTGATGAGCACAAAGTTGAAGGTCTGTCCAGTCACCCCAGAGACGTaGTCCCGGATGCGCTCTAGAACTGGGATCCAGGGCTTTGGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: LMSTKLKVCPVTPET*SRMRSRTGIQGFGD Trigger: GTCTCCAAAGCCCTGGATCCCAGTTCTAGAGCGCATCCGGGATCACGTCTCTGGGGTGACTGGACAGACCTTCAACTTTGTGCTCATCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000343075.7 ENST00000429722.3 ENST00000543444.1 |
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| CDS-3UTR CAA 90 bp | CGAAAAGTCAGATTCACCCGTGGAGCCAGAACCTTCTTTCTCACGGGAAGACTGCTGGCTCTTCTCCAGTaGGCTCTTGCTCCTCCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: RKVRFTRGARTFFLTGRLLALLQ*ALAPPA Trigger: AGCAGGAGGAGCAAGAGCCAACTGGAGAAGAGCCAG...CAGTCTTCCCGTGAGAAAGAAGGTTCTGGCTCCACGGGTGAATCTGACTTTTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000440112.2 ENST00000619381.4 |
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| CDS-3UTR CAA 90 bp | CAGAACCTTCTTTCTCACGGGAAGACTGTGGTACCAGTGCGTGTTGGTCGGGTGTGGTACCAGTGCGTGTaGGTCGGGTGGTTCATCATT | + |
|
Preference number: 5 (lower is better) Translates to: QNLLSHGKTVVPVRVGRVWYQCV*VGWFII Trigger: AATGATGAACCACCCGACCAACACGCACTGGTACCA...CACCCGACCAACACGCACTGGTACCACAGTCTTCCCGTGAGAAAGAAGGTTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000440112.2 ENST00000619381.4 |
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| CDS TCA 90 bp | AGGAAACAGAAGATGTTAAAGCCGGAAGGGACCCTAGGGACAATCTaGTCCAGGGTCTCCCACGTCCACCTGTGCATCAGAATCAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: RKQKMLKPEGTLGTI*SRVSHVHLCIRISW Trigger: CCAGCTGATTCTGATGCACAGGTGGACGTGGGAGACCCTGGATCAGATTGTCCCTAGGGTCCCTTCCGGCTTTAACATCTTCTGTTTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000536358.1 |
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| CDS CCA 90 bp | CAGGAATCTGTCCATCCTGTCCCCACAGGAAAGAAGGGACGTCAGTaGCGAGGCCAAGACAGAAATTGCTCAAGTTCTATCCCCAGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: QESVHPVPTGKKGRQ*RGQDRNCSSSIPSA Trigger: TGCACTGGGGATAGAACTTGAGCAATTTCTGTCTTGGCCTCGCCACTGACGTCCCTTCTTTCCTGTGGGGACAGGATGGACAGATTCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000429722.3 ENST00000536358.1 ENST00000536720.1 ENST00000619381.4 |
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| CDS-3UTR CAA 90 bp | TCTTTCTCACGGGAAGACTGTGGTACCAGTGCGTGTTGGTCGGGTGGTTCATCATCCTGGGCCTCTTCCTaGTGCTTTCTTTGTCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: SFSREDCGTSACWSGGSSSWASS*CFLCLL Trigger: GAGGAGACAAAGAAAGCACAAGGAAGAGGCCCAGGA...TGATGAACCACCCGACCAACACGCACTGGTACCACAGTCTTCCCGTGAGAAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000440112.2 ENST00000619381.4 |
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| CDS-3UTR CAA 90 bp | CTCACTTCCTACTCCGGGATGAGCTCCAGGATCCAGGAAGACCGAGTGCTGGCGTTCTTTCTCCAACTCTaGGAAAATCTCATCTGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: LTSYSGMSSRIQEDRVLAFFLQL*ENLICL Trigger: GAGGCAGATGAGATTTTCCAAGAGTTGGAGAAAGAA...CGCCAGCACTCGGTCTTCCTGGATCCTGGAGCTCATCCCGGAGTAGGAAGTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000543444.1 |
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| CDS-3UTR CAA 90 bp | GGATCCAGGAAGACCGAGTGCTGGCGCTATTCCACTCTTAGAGCCCCAGTGTACTTGATGAGCACAAAGTaGAAGGTCTGTCCAGTCACC | + |
|
Preference number: 5 (lower is better) Translates to: GSRKTECWRYSTLRAPVYLMSTK*KVCPVT Trigger: GGTGACTGGACAGACCTTCAACTTTGTGCTCATCAA...GTACACTGGGGCTCTAAGAGTGGAATAGCGCCAGCACTCGGTCTTCCTGGATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000543444.1 |
||
| CDS CCA 90 bp | AGATTCACCCGTGGAGCCAGAACCTTCTTTCTCACGGGAAGACTGTaGTACCAGTGCGTGTTGGTCGGGTGGTTCATCATTAGTAAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: RFTRGARTFFLTGRL*YQCVLVGWFIISKL Trigger: GAGCTTACTAATGATGAACCACCCGACCAACACGCACTGGTACCACAGTCTTCCCGTGAGAAAGAAGGTTCTGGCTCCACGGGTGAATCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000343075.7 ENST00000429722.3 ENST00000440112.2 ENST00000619381.4 |
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| CDS-3UTR CAA 90 bp | GTTCAGGAGTTAATCACCTCTCACTTCCTACTCCGGGATGAGCTCCAGGATCCATCCTGGGCCTCTTCCTaGTGCTTTCTTTGTCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: VQELITSHFLLRDELQDPSWASS*CFLCLL Trigger: GAGGAGACAAAGAAAGCACAAGGAAGAGGCCCAGGA...TGGATCCTGGAGCTCATCCCGGAGTAGGAAGTGAGAGGTGATTAACTCCTGAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000543444.1 |
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| CDS TCA 90 bp | CTAGCTTGCAAAAACCCAGAGGTCTGCACTCCACGCCTGAGCACCTaGATTTTTAAAGAACTACCTCCTGGGAATTCGCACGCCACAGCT | + |
|
Preference number: 5 (lower is better) Translates to: LACKNPEVCTPRLST*IFKELPPGNSHATA Trigger: AGCTGTGGCGTGCGAATTCCCAGGAGGTAGTTCTTTAAAAATTCAGGTGCTCAGGCGTGGAGTGCAGACCTCTGGGTTTTTGCAAGCTAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000536358.1 |
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| CDS GCA 90 bp | CCCACAGGAAAGAAGGGACGTCAGTGGCGAGGCCAAGACAGAAATTaGTCAAGTTCTATCCCCAGTGCAAAAATCTGTTTGTCCAAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: PTGKKGRQWRGQDRN*SSSIPSAKICLSKG Trigger: CCCCTTGGACAAACAGATTTTTGCACTGGGGATAGAACTTGAGCAATTTCTGTCTTGGCCTCGCCACTGACGTCCCTTCTTTCCTGTGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000429722.3 ENST00000536358.1 ENST00000536720.1 ENST00000619381.4 |
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| CDS-3UTR CAA 90 bp | TACGAAAAGTCAGATTCACCCGTGGAGCCAGAACCTTCTTTCTCACGGGAAGACTGGTACCAGTGCGTGTaGGTCGGGTGGTTCATCATT | + |
|
Preference number: 5 (lower is better) Translates to: YEKSDSPVEPEPSFSREDWYQCV*VGWFII Trigger: AATGATGAACCACCCGACCAACACGCACTGGTACCA...GTCTTCCCGTGAGAAAGAAGGTTCTGGCTCCACGGGTGAATCTGACTTTTCGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000440112.2 ENST00000619381.4 |
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| CDS-3UTR CAA 90 bp | ATTCACCCGTGGAGCCAGAACCTTCTTTCTCACGGGAAGACTGTGGTACCAGTGAGTGCAAAAATCTGTTaGTCCAAGGGGTCTCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: IHPWSQNLLSHGKTVVPVSAKIC*SKGSHS Trigger: GCTGTGAGACCCCTTGGACAAACAGATTTTTGCACT...CACTGGTACCACAGTCTTCCCGTGAGAAAGAAGGTTCTGGCTCCACGGGTGAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000619381.4 |
||
| CDS-3UTR CAA 90 bp | ACCTCTCACTTCCTACTCCGGGATGAGCTCCAGGATCCAGGAAGACCGAGTGCTAGAAGACTTGTAACATaGAGTCCACTAAACAGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: TSHFLLRDELQDPGRPSARRLVT*SPLNRV Trigger: CACCCTGTTTAGTGGACTCAATGTTACAAGTCTTCT...AGCACTCGGTCTTCCTGGATCCTGGAGCTCATCCCGGAGTAGGAAGTGAGAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000543444.1 |
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| CDS GCA 90 bp | CTACTTCTTTCTCCAACTCTTGGAAAATCTCATCTGCCTCAGCTTTaGCAAACAGGACTGTGTAACTGCAGTCCAGGCCCTCAGCCCGAA | + |
|
Preference number: 5 (lower is better) Translates to: LLLSPTLGKSHLPQL*QTGLCNCSPGPQPE Trigger: TTCGGGCTGAGGGCCTGGACTGCAGTTACACAGTCCTGTTTGGCAAAGCTGAGGCAGATGAGATTTTCCAAGAGTTGGAGAAAGAAGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000343075.7 ENST00000429722.3 ENST00000440112.2 ENST00000536242.1 ENST00000536358.1 ENST00000536720.1 ENST00000543444.1 ENST00000619381.4 |
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| CDS-3UTR CAA 90 bp | AGAACCTTCTTTCTCACGGGAAGACTGTGGTACCAGTGCGTGTTGGTCGGGTGGTTCTTTCTCCAACTCTaGGAAAATCTCATCTGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: RTFFLTGRLWYQCVLVGWFFLQL*ENLICL Trigger: GAGGCAGATGAGATTTTCCAAGAGTTGGAGAAAGAA...CCACCCGACCAACACGCACTGGTACCACAGTCTTCCCGTGAGAAAGAAGGTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000440112.2 ENST00000619381.4 |
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| CDS-3UTR CAA 90 bp | GAACCTTCTTTCTCACGGGAAGACTGTGGTACCAGTGCGTGTTGGTCGGGTGGTTTCTTTCTCCAACTCTaGGAAAATCTCATCTGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: EPSFSREDCGTSACWSGGFFLQL*ENLICL Trigger: GAGGCAGATGAGATTTTCCAAGAGTTGGAGAAAGAA...ACCACCCGACCAACACGCACTGGTACCACAGTCTTCCCGTGAGAAAGAAGGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000440112.2 ENST00000619381.4 |
||
| CDS-3UTR CAA 90 bp | GTTCAGGAGTTAATCACCTCTCACTTCCTACTCCGGGATGAGCTCCAGGATCCAACAGGGTGTCACCTGTaGATGAGCACAAAGTTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: VQELITSHFLLRDELQDPTGCHL*MSTKLK Trigger: CTTCAACTTTGTGCTCATCAACAGGTGACACCCTGT...TGGATCCTGGAGCTCATCCCGGAGTAGGAAGTGAGAGGTGATTAACTCCTGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000543444.1 |
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| CDS-3UTR CAA 90 bp | ATTTTACGAAAAGTCAGATTCACCCGTGGAGCCAGAACCTTCTTTCTCACGGGAAGGCCAAGACAGAAATaGCTCAAGTTCTATCCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: ILRKVRFTRGARTFFLTGRPRQK*LKFYPQ Trigger: CTGGGGATAGAACTTGAGCAATTTCTGTCTTGGCCT...TCCCGTGAGAAAGAAGGTTCTGGCTCCACGGGTGAATCTGACTTTTCGTAAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000619381.4 |
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| CDS TCA 90 bp | TATTGGATGAATCCATTAGTGAACCCATCAGTAAATAATGGATCCTaGGTTCAGATTTCTCCAAACATACGATCATTAATTGCACCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: YWMNPLVNPSVNNGS*VQISPNIRSLIAPN Trigger: GTTTGGTGCAATTAATGATCGTATGTTTGGAGAAATCTGAACTCAGGATCCATTATTTACTGATGGGTTCACTAATGGATTCATCCAATA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000536720.1 |
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| CDS GCA 72 bp | CTAGGGCGCAAAGAGAGCAGCCGGGCGGCCCCCTGGTaGCACCTGCTGGCCTCCCGTGTGTGGCAAGCACTG | + |
|
Preference number: 6 (lower is better) Translates to: LGRKESSRAAPW*HLLASRVWQAL Trigger: CAGTGCTTGCCACACACGGGAGGCCAGCAGGTGGCACCAGGGGGCCGCCCGGCTGCTCTCTTTGCGCCCTAG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000536720.1 |
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| CDS CCA 72 bp | GCAGCTCCGGCGCAGATCGGAATCCCGCAGTCACCCTaGTGGCCTCGTGGTGGGAAAGACGCGCCCCAGCGA | + |
|
Preference number: 6 (lower is better) Translates to: AAPAQIGIPQSP*WPRGGKDAPQR Trigger: TCGCTGGGGCGCGTCTTTCCCACCACGAGGCCACCAGGGTGACTGCGGGATTCCGATCTGCGCCGGAGCTGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000536720.1 ENST00000619381.4 |
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| CDS CCA 72 bp | GCTCCGGCGCAGATCGGAATCCCGCAGTCACCCTGGTaGCCTCGTGGTGGGAAAGACGCGCCCCAGCGAATC | + |
|
Preference number: 6 (lower is better) Translates to: APAQIGIPQSPW*PRGGKDAPQRI Trigger: GATTCGCTGGGGCGCGTCTTTCCCACCACGAGGCCACCAGGGTGACTGCGGGATTCCGATCTGCGCCGGAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000536720.1 ENST00000619381.4 |
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| CDS CCA 72 bp | GATCGGAATCCCGCAGTCACCCTGGTGGCCTCGTGGTaGGAAAGACGCGCCCCAGCGAATCGGTCGCGTCAC | + |
|
Preference number: 6 (lower is better) Translates to: DRNPAVTLVASW*ERRAPANRSRH Trigger: GTGACGCGACCGATTCGCTGGGGCGCGTCTTTCCCACCACGAGGCCACCAGGGTGACTGCGGGATTCCGATC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000536720.1 |
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| CDS CCA 72 bp | GCAGATCGGAATCCCGCAGTCACCCTGGTGGCCTCGTaGTGGGAAAGACGCGCCCCAGCGAATCGGTCGCGT | + |
|
Preference number: 6 (lower is better) Translates to: ADRNPAVTLVAS*WERRAPANRSR Trigger: ACGCGACCGATTCGCTGGGGCGCGTCTTTCCCACCACGAGGCCACCAGGGTGACTGCGGGATTCCGATCTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000536720.1 |
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| CDS CCA 72 bp | CCCCAGCGAATCGGTCGCGTCACTTCCGGAGCACGCTaGGAACTACGGCAGGCTAGGGCGCAAAGAGAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: PQRIGRVTSGAR*ELRQARAQREQ Trigger: CTGCTCTCTTTGCGCCCTAGCCTGCCGTAGTTCCCAGCGTGCTCCGGAAGTGACGCGACCGATTCGCTGGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000536720.1 |
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| CDS GCA 72 bp | CACTGCAACACGTCCGTGGGGTGGGGGTGGCAAGAGTaGTCTAGCATCGCAGCTCCGGCGCAGATCGGAATC | + |
|
Preference number: 6 (lower is better) Translates to: HCNTSVGWGWQE*SSIAAPAQIGI Trigger: GATTCCGATCTGCGCCGGAGCTGCGATGCTAGAGCACTCTTGCCACCCCCACCCCACGGACGTGTTGCAGTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000343075.7 ENST00000429722.3 ENST00000536242.1 ENST00000536358.1 ENST00000536720.1 ENST00000619381.4 |
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| CDS CCA 72 bp | GTGTTGGTCGGGTGGTTCATCATTAGTAAGCTCCCGTaGGCCAGCGGCAGCCTGACCACCGCCACCCTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: VLVGWFIISKLP*ASGSLTTATLL Trigger: CAGGAGGGTGGCGGTGGTCAGGCTGCCGCTGGCCCACGGGAGCTTACTAATGATGAACCACCCGACCAACAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000343075.7 ENST00000429722.3 ENST00000440112.2 ENST00000619381.4 |
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| CDS GCA 72 bp | GCGTCGCCATACGTTGCCTGCTTCCTGGGCACACTGTaGCACTTCCCGAATACCTGGACTCTGGCCAGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: ASPYVACFLGTL*HFPNTWTLASA Trigger: AGCACTGGCCAGAGTCCAGGTATTCGGGAAGTGGCACAGTGTGCCCAGGAAGCAGGCAACGTATGGCGACGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000343075.7 ENST00000429722.3 ENST00000536242.1 ENST00000536358.1 ENST00000543444.1 |
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| CDS CCA 72 bp | AGGTCAGCCCAGCGTCGCCATACGTTGCCTGCTTCCTaGGCACACTGTGCCACTTCCCGAATACCTGGACTC | + |
|
Preference number: 6 (lower is better) Translates to: RSAQRRHTLPAS*AHCATSRIPGL Trigger: GAGTCCAGGTATTCGGGAAGTGGCACAGTGTGCCCAGGAAGCAGGCAACGTATGGCGACGCTGGGCTGACCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000343075.7 ENST00000429722.3 ENST00000536242.1 ENST00000543444.1 |
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| CDS GCA 72 bp | CATCTGCCTCAGCTTTGCCAAACAGGACTGTGTAACTaGAGTCCAGGCCCTCAGCCCGAATGTGCCGCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: HLPQLCQTGLCN*SPGPQPECAAS Trigger: GCTGGCGGCACATTCGGGCTGAGGGCCTGGACTGCAGTTACACAGTCCTGTTTGGCAAAGCTGAGGCAGATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000343075.7 ENST00000429722.3 ENST00000440112.2 ENST00000536242.1 ENST00000536358.1 ENST00000536720.1 ENST00000543444.1 ENST00000619381.4 |
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| CDS CCA 72 bp | ACGGGAAGACTGTGGTACCAGTGCGTGTTGGTCGGGTaGTTCATCATTAGTAAGCTCCCGTGGGCCAGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: TGRLWYQCVLVG*FIISKLPWASG Trigger: GCCGCTGGCCCACGGGAGCTTACTAATGATGAACCACCCGACCAACACGCACTGGTACCACAGTCTTCCCGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000343075.7 ENST00000429722.3 ENST00000440112.2 ENST00000619381.4 |
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| CDS CAA 90 bp | GCCAGAACCTTCTTTCTCACGGGAAGACTGTGGTACCAGTGCGTGTaGGTCGGGTGGTTCATCATTAGTAAGCTCCCGTGGGCCAGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: ARTFFLTGRLWYQCV*VGWFIISKLPWASG Trigger: GCCGCTGGCCCACGGGAGCTTACTAATGATGAACCACCCGACCAACACGCACTGGTACCACAGTCTTCCCGTGAGAAAGAAGGTTCTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000343075.7 ENST00000429722.3 ENST00000440112.2 ENST00000619381.4 |
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| CDS TCA 72 bp | GCTCTAGAACTGGGATCCAGGGCTTTGGAGACAGCGTaGGGCCTGAAAATGTGTAGGTCAGCCCAGCGTCGC | + |
|
Preference number: 6 (lower is better) Translates to: ALELGSRALETA*GLKMCRSAQRR Trigger: GCGACGCTGGGCTGACCTACACATTTTCAGGCCTCACGCTGTCTCCAAAGCCCTGGATCCCAGTTCTAGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000343075.7 ENST00000429722.3 ENST00000536242.1 ENST00000543444.1 |
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| CDS GCA 72 bp | ACCCTCCTGGAGGGGCTTTTCCCACGGGAATCCTTATaGCGGAAGACAAAGTCTCTGCAGGCACCGAAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: TLLEGLFPRESL*RKTKSLQAPKE Trigger: CTCCTTCGGTGCCTGCAGAGACTTTGTCTTCCGGCATAAGGATTCCCGTGGGAAAAGCCCCTCCAGGAGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000343075.7 ENST00000429722.3 ENST00000440112.2 ENST00000619381.4 |
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| CDS CAA 72 bp | CTGAAAATGTGTAGGTCAGCCCAGCGTCGCCATACGTaGCCTGCTTCCTGGGCACACTGTGCCACTTCCCGA | + |
|
Preference number: 6 (lower is better) Translates to: LKMCRSAQRRHT*PASWAHCATSR Trigger: TCGGGAAGTGGCACAGTGTGCCCAGGAAGCAGGCAACGTATGGCGACGCTGGGCTGACCTACACATTTTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000343075.7 ENST00000429722.3 ENST00000536242.1 ENST00000543444.1 |
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| CDS CAA 90 bp | CAGGGTCTCCCACGTCCACCTGTGCATCAGAATCAGCTGGCTAGCTaGCAAAAACCCAGAGGTCTGCACTCCACGCCTGAGCACCTGAAT | + |
|
Preference number: 6 (lower is better) Translates to: QGLPRPPVHQNQLAS*QKPRGLHSTPEHLN Trigger: ATTCAGGTGCTCAGGCGTGGAGTGCAGACCTCTGGGTTTTTGCAAGCTAGCCAGCTGATTCTGATGCACAGGTGGACGTGGGAGACCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000536358.1 |
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| CDS TCA 72 bp | AACTGGGATCCAGGGCTTTGGAGACAGCGTGAGGCCTaGAAATGTGTAGGTCAGCCCAGCGTCGCCATACGT | + |
|
Preference number: 6 (lower is better) Translates to: NWDPGLWRQREA*KCVGQPSVAIR Trigger: ACGTATGGCGACGCTGGGCTGACCTACACATTTTCAGGCCTCACGCTGTCTCCAAAGCCCTGGATCCCAGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000343075.7 ENST00000429722.3 ENST00000536242.1 ENST00000543444.1 |
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| CDS TCA 72 bp | ACAAAGTTGAAGGTCTGTCCAGTCACCCCAGAGACGTaGTCCCGGATGCGCTCTAGAACTGGGATCCAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: TKLKVCPVTPET*SRMRSRTGIQG Trigger: GCCCTGGATCCCAGTTCTAGAGCGCATCCGGGATCACGTCTCTGGGGTGACTGGACAGACCTTCAACTTTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000343075.7 ENST00000429722.3 ENST00000543444.1 |
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| CDS GCA 72 bp | GGGCTCCCAGGGGCCAGTTCTCTTTCATCATCTCGGTaGTCCCCGATGTGGTCACAGCCATCTTTATACCTG | + |
|
Preference number: 6 (lower is better) Translates to: GLPGASSLSSSR*SPMWSQPSLYL Trigger: CAGGTATAAAGATGGCTGTGACCACATCGGGGAGCACCGAGATGATGAAAGAGAACTGGCCCCTGGGAGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000343075.7 ENST00000429722.3 ENST00000440112.2 ENST00000619381.4 |
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| CDS GCA 72 bp | CACGTCCACCTGTGCATCAGAATCAGCTGGCTAGCTTaGAAAAACCCAGAGGTCTGCACTCCACGCCTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: HVHLCIRISWLA*KNPEVCTPRLS Trigger: GCTCAGGCGTGGAGTGCAGACCTCTGGGTTTTTGCAAGCTAGCCAGCTGATTCTGATGCACAGGTGGACGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000536358.1 |
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| CDS CCA 72 bp | CGCACGCAAAATTCTGATATCACTGCAACACGTCCGTaGGGTGGGGGTGGCAAGAGTGCTCTAGCATCGCAG | + |
|
Preference number: 6 (lower is better) Translates to: RTQNSDITATRP*GGGGKSALASQ Trigger: CTGCGATGCTAGAGCACTCTTGCCACCCCCACCCCACGGACGTGTTGCAGTGATATCAGAATTTTGCGTGCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000343075.7 ENST00000429722.3 ENST00000536358.1 ENST00000536720.1 |
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| CDS CAA 72 bp | CCACGTCCACCTGTGCATCAGAATCAGCTGGCTAGCTaGCAAAAACCCAGAGGTCTGCACTCCACGCCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: PRPPVHQNQLAS*QKPRGLHSTPE Trigger: CTCAGGCGTGGAGTGCAGACCTCTGGGTTTTTGCAAGCTAGCCAGCTGATTCTGATGCACAGGTGGACGTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000536358.1 |
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| CDS CCA 72 bp | CCATCGCAAAATTCTGATATCACTGCAACACGTCCGTaGGGTGGGGGTGGCAAGAGTGCTCTAGCATCGCAG | + |
|
Preference number: 6 (lower is better) Translates to: PSQNSDITATRP*GGGGKSALASQ Trigger: CTGCGATGCTAGAGCACTCTTGCCACCCCCACCCCACGGACGTGTTGCAGTGATATCAGAATTTTGCGATGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000536242.1 |
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| CDS CCA 72 bp | AGGGTCTCCCACGTCCACCTGTGCATCAGAATCAGCTaGCTAGCTTGCAAAAACCCAGAGGTCTGCACTCCA | + |
|
Preference number: 6 (lower is better) Translates to: RVSHVHLCIRIS*LACKNPEVCTP Trigger: TGGAGTGCAGACCTCTGGGTTTTTGCAAGCTAGCCAGCTGATTCTGATGCACAGGTGGACGTGGGAGACCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000536358.1 |
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| CDS TCA 72 bp | AAGATGTTAAAGCCGGAAGGGACCCTAGGGACAATCTaGTCCAGGGTCTCCCACGTCCACCTGTGCATCAGA | + |
|
Preference number: 6 (lower is better) Translates to: KMLKPEGTLGTI*SRVSHVHLCIR Trigger: TCTGATGCACAGGTGGACGTGGGAGACCCTGGATCAGATTGTCCCTAGGGTCCCTTCCGGCTTTAACATCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000536358.1 |
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| CDS CCA 72 bp | TCTTTCTCACGGGAAGACTGTGGTACCAGTGCGTGTTaGTCGGGTGGTTCATCATTAGTAAGCTCCCGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: SFSREDCGTSAC*SGGSSLVSSRG Trigger: CCCACGGGAGCTTACTAATGATGAACCACCCGACCAACACGCACTGGTACCACAGTCTTCCCGTGAGAAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000343075.7 ENST00000429722.3 ENST00000440112.2 ENST00000619381.4 |
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| CDS CCA 72 bp | CGTGGAGCCAGAACCTTCTTTCTCACGGGAAGACTGTaGTACCAGTGCGTGTTGGTCGGGTGGTTCATCATT | + |
|
Preference number: 6 (lower is better) Translates to: RGARTFFLTGRL*YQCVLVGWFII Trigger: AATGATGAACCACCCGACCAACACGCACTGGTACCACAGTCTTCCCGTGAGAAAGAAGGTTCTGGCTCCACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000343075.7 ENST00000429722.3 ENST00000440112.2 ENST00000619381.4 |
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| CDS CCA 72 bp | ATGTCGCAAAATTCTGATATCACTGCAACACGTCCGTaGGGTGGGGGTGGCAAGAGTGCTCTAGCATCGCAG | + |
|
Preference number: 6 (lower is better) Translates to: MSQNSDITATRP*GGGGKSALASQ Trigger: CTGCGATGCTAGAGCACTCTTGCCACCCCCACCCCACGGACGTGTTGCAGTGATATCAGAATTTTGCGACAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000619381.4 |
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| CDS GCA 72 bp | GAAGGGGAAACTGTTGCCCACAGAGGCGAAGAGGTTTaGCCAAAGTCAACTGTCCACCCCTTTAAGGAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: EGETVAHRGEEV*PKSTVHPFKEE Trigger: TTCCTCCTTAAAGGGGTGGACAGTTGACTTTGGGCAAACCTCTTCGCCTCTGTGGGCAACAGTTTCCCCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000536358.1 |
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| CDS CCA 72 bp | GTCCATCCTGTCCCCACAGGAAAGAAGGGACGTCAGTaGCGAGGCCAAGACAGAAATTGCTCAAGTTCTATC | + |
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Preference number: 6 (lower is better) Translates to: VHPVPTGKKGRQ*RGQDRNCSSSI Trigger: GATAGAACTTGAGCAATTTCTGTCTTGGCCTCGCCACTGACGTCCCTTCTTTCCTGTGGGGACAGGATGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000429722.3 ENST00000536358.1 ENST00000536720.1 ENST00000619381.4 |
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| CDS CAA 72 bp | TTCTTTCTCACGGGAAGACTGTGGTACCAGTGCGTGTaGGTCGGGTGGTTCATCATTAGTAAGCTCCCGTGG | + |
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Preference number: 6 (lower is better) Translates to: FFLTGRLWYQCV*VGWFIISKLPW Trigger: CCACGGGAGCTTACTAATGATGAACCACCCGACCAACACGCACTGGTACCACAGTCTTCCCGTGAGAAAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000343075.7 ENST00000429722.3 ENST00000440112.2 ENST00000619381.4 |
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| CDS GCA 72 bp | AGAACCTTCTTTCTCACGGGAAGACTGTGGTACCAGTaGGTGTTGGTCGGGTGGTTCATCATTAGTAAGCTC | + |
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Preference number: 6 (lower is better) Translates to: RTFFLTGRLWYQ*VLVGWFIISKL Trigger: GAGCTTACTAATGATGAACCACCCGACCAACACGCACTGGTACCACAGTCTTCCCGTGAGAAAGAAGGTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000343075.7 ENST00000429722.3 ENST00000440112.2 ENST00000619381.4 |
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| CDS GCA 72 bp | CAATCCAAACCCTCATTTTGCAGAAGGGGAAACTGTTaGCCACAGAGGCGAAGAGGTTTGCCCAAAGTCAAC | + |
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Preference number: 6 (lower is better) Translates to: QSKPSFCRRGNC*PQRRRGLPKVN Trigger: GTTGACTTTGGGCAAACCTCTTCGCCTCTGTGGGCAACAGTTTCCCCTTCTGCAAAATGAGGGTTTGGATTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000536358.1 |
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| CDS CCA 72 bp | GCCAGTTCTCTTTCATCATCTCGGTGCTCCCCGATGTaGTCACAGCCATCTTTATACCTGTTGATGAGCACA | + |
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Preference number: 6 (lower is better) Translates to: ASSLSSSRCSPM*SQPSLYLLMST Trigger: TGTGCTCATCAACAGGTATAAAGATGGCTGTGACCACATCGGGGAGCACCGAGATGATGAAAGAGAACTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000343075.7 ENST00000429722.3 |
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| CDS GCA 72 bp | AAGAAGGGACGTCAGTGGCGAGGCCAAGACAGAAATTaGTCAAGTTCTATCCCCAGTGCAAAAATCTGTTTG | + |
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Preference number: 6 (lower is better) Translates to: KKGRQWRGQDRN*SSSIPSAKICL Trigger: CAAACAGATTTTTGCACTGGGGATAGAACTTGAGCAATTTCTGTCTTGGCCTCGCCACTGACGTCCCTTCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000429722.3 ENST00000536358.1 ENST00000536720.1 ENST00000619381.4 |
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| CDS CAA 72 bp | AAAGAAGGGACGTCAGTGGCGAGGCCAAGACAGAAATaGCTCAAGTTCTATCCCCAGTGCAAAAATCTGTTT | + |
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Preference number: 6 (lower is better) Translates to: KEGTSVARPRQK*LKFYPQCKNLF Trigger: AAACAGATTTTTGCACTGGGGATAGAACTTGAGCAATTTCTGTCTTGGCCTCGCCACTGACGTCCCTTCTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000429722.3 ENST00000536358.1 ENST00000536720.1 ENST00000619381.4 |
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| CDS CAA 72 bp | ACACTTCCTTTTGGAGGAGACAGAAGACTTGTAACATaGAGTCCACTAAACAGGGTGTCACCTGTTGATGAG | + |
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Preference number: 6 (lower is better) Translates to: TLPFGGDRRLVT*SPLNRVSPVDE Trigger: CTCATCAACAGGTGACACCCTGTTTAGTGGACTCAATGTTACAAGTCTTCTGTCTCCTCCAAAAGGAAGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000543444.1 |
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| CDS GCA 72 bp | CTGAGTTCAGATTTCTCCAAACATACGATCATTAATTaGACCAAACAAGCCCTCAATGCACACACACACACA | + |
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Preference number: 6 (lower is better) Translates to: LSSDFSKHTIIN*TKQALNAHTHT Trigger: TGTGTGTGTGTGTGCATTGAGGGCTTGTTTGGTGCAATTAATGATCGTATGTTTGGAGAAATCTGAACTCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000536720.1 |
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| CDS CAA 90 bp | AGCCATCTTTATACCTGTAAAATATTCTACTTCTTTCTCCAACTCTaGGAAAATCTCATCTGCCTCAGCTTTGCCAAACAGGACTGTGTA | + |
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Preference number: 6 (lower is better) Translates to: SHLYTCKIFYFFLQL*ENLICLSFAKQDCV Trigger: TACACAGTCCTGTTTGGCAAAGCTGAGGCAGATGAGATTTTCCAAGAGTTGGAGAAAGAAGTAGAATATTTTACAGGTATAAAGATGGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000440112.2 ENST00000619381.4 |
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