RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ALK (Homo sapiens)

Ensembl gene IDs: ENSG00000171094

Ensembl transcript IDs: ENST00000389048.8, ENST00000431873.6, ENST00000453137.1, ENST00000498037.1, ENST00000618119.4, ENST00000638605.1, ENST00000642122.1

Found 937 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCCCCCTTCCACGGCCGGCCCTCTAGGGACTCGAACAGAGATCTCTaGAGCTGTGGGTTTCTTTGCAGCCTTGCCAGAGGAGGTGGTAGG +
Preference number: 1 (lower is better)
Translates to: SPFHGRPSRDSNRDL*SCGFLCSLARGGGR
Trigger: CCTACCACCTCCTCTGGCAAGGCTGCAAAGAAACCCACAGCTGCAGAGATCTCTGTTCGAGTCCCTAGAGGGCCGGCCGTGGAAGGGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431873.6
3UTR CCA 90 bp AGAGCACACTTCAGGCAGCGTCTTCACAGCCACTTGCAGGGGGCTTaGGTCGTTGGGCATTCCGGACACCTGGCCTTCATACACCTCCCC +
Preference number: 1 (lower is better)
Translates to: RAHFRQRLHSHLQGA*VVGHSGHLAFIHLP
Trigger: GGGGAGGTGTATGAAGGCCAGGTGTCCGGAATGCCCAACGACCCAAGCCCCCTGCAAGTGGCTGTGAAGACGCTGCCTGAAGTGTGCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431873.6
3UTR GCA 90 bp TCCGTGGACCTTGTGCAACTCCGAAGGAGGGTTGGACTGAGAGAATaGCATATTCACGTGTCCCCCTTCCACGGCCGGCCCTCTAGGGAC +
Preference number: 1 (lower is better)
Translates to: SVDLVQLRRRVGLRE*HIHVSPFHGRPSRD
Trigger: GTCCCTAGAGGGCCGGCCGTGGAAGGGGGACACGTGAATATGGCATTCTCTCAGTCCAACCCTCCTTCGGAGTTGCACAAGGTCCACGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431873.6
3UTR TCA 90 bp TTTCTGGATCCGTGGACCTTGTGCAACTCCGAAGGAGGGTTGGACTaGGAGAATGCCATATTCACGTGTCCCCCTTCCACGGCCGGCCCT +
Preference number: 1 (lower is better)
Translates to: FLDPWTLCNSEGGLD*ENAIFTCPPSTAGP
Trigger: AGGGCCGGCCGTGGAAGGGGGACACGTGAATATGGCATTCTCTCAGTCCAACCCTCCTTCGGAGTTGCACAAGGTCCACGGATCCAGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431873.6
3UTR TCA 90 bp TGCCTCTCTCTCCTCCACGGTCTTAGGGATCCCAAGGAAGAGAAGTaGGTGTGCGACCGAGCTCAGGGCCCAGGCTGGTTCATGCTATTC +
Preference number: 1 (lower is better)
Translates to: CLSLLHGLRDPKEEK*VCDRAQGPGWFMLF
Trigger: GAATAGCATGAACCAGCCTGGGCCCTGAGCTCGGTCGCACACTCACTTCTCTTCCTTGGGATCCCTAAGACCGTGGAGGAGAGAGAGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431873.6
3UTR CCA 90 bp ACCAGGAGCCGTACGTTGGGTTCCACAAGCTGGTGGGCTTGTTTCTaGATCCGTGGACCTTGTGCAACTCCGAAGGAGGGTTGGACTGAG +
Preference number: 1 (lower is better)
Translates to: TRSRTLGSTSWWACF*IRGPCATPKEGWTE
Trigger: CTCAGTCCAACCCTCCTTCGGAGTTGCACAAGGTCCACGGATCCAGAAACAAGCCCACCAGCTTGTGGAACCCAACGTACGGCTCCTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431873.6
3UTR CCA 90 bp GCTTGTTTCTGGATCCGTGGACCTTGTGCAACTCCGAAGGAGGGTTaGACTGAGAGAATGCCATATTCACGTGTCCCCCTTCCACGGCCG +
Preference number: 1 (lower is better)
Translates to: ACFWIRGPCATPKEG*TERMPYSRVPLPRP
Trigger: CGGCCGTGGAAGGGGGACACGTGAATATGGCATTCTCTCAGTCCAACCCTCCTTCGGAGTTGCACAAGGTCCACGGATCCAGAAACAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431873.6
3UTR GCA 90 bp GAGTGTGCGACCGAGCTCAGGGCCCAGGCTGGTTCATGCTATTCTTaGTTTTCAGAATGGTATCCTCGTAATGACCAGCTCCAGGGGCAG +
Preference number: 1 (lower is better)
Translates to: ECATELRAQAGSCYS*FSEWYPRNDQLQGQ
Trigger: CTGCCCCTGGAGCTGGTCATTACGAGGATACCATTCTGAAAAGCAAGAATAGCATGAACCAGCCTGGGCCCTGAGCTCGGTCGCACACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431873.6
3UTR GCA 90 bp AAGAGAAGTGAGTGTGCGACCGAGCTCAGGGCCCAGGCTGGTTCATaGTATTCTTGCTTTTCAGAATGGTATCCTCGTAATGACCAGCTC +
Preference number: 1 (lower is better)
Translates to: KRSECATELRAQAGS*YSCFSEWYPRNDQL
Trigger: GAGCTGGTCATTACGAGGATACCATTCTGAAAAGCAAGAATAGCATGAACCAGCCTGGGCCCTGAGCTCGGTCGCACACTCACTTCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431873.6
3UTR CCA 90 bp ATTATTCTTTTTGGTGGGTTTCTCTGTAAACCAGGAGCCGTACGTTaGGTTCCACAAGCTGGTGGGCTTGTTTCTGGATCCGTGGACCTT +
Preference number: 1 (lower is better)
Translates to: IILFGGFLCKPGAVR*VPQAGGLVSGSVDL
Trigger: AAGGTCCACGGATCCAGAAACAAGCCCACCAGCTTGTGGAACCCAACGTACGGCTCCTGGTTTACAGAGAAACCCACCAAAAAGAATAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431873.6
3UTR-3UTR CCA 90 bp TCATATTGGCAGTCAGCGAAGAGGGCTCTAGGAGCAGTGAGGCCCCCGGAAGTCAGGTGGTGGGGCAGCTaGGCTGCGCTCCTCCTCCCG +
Preference number: 2 (lower is better)
Translates to: SYWQSAKRALGAVRPPEVRWWGS*AALLLP
Trigger: CGGGAGGAGGAGCGCAGCCCAGCTGCCCCACCACCT...GACTTCCGGGGGCCTCACTGCTCCTAGAGCCCTCTTCGCTGACTGCCAATATGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000431873.6
3UTR-3UTR CCA 90 bp AGCTCCAGCAGGATGAACCGGGGCAGGGATTGCAGGCTCACCCCAATGCAGCGAATGGCTTGCAGCTCCTaGTGCTTCCGGCGGTACACC +
Preference number: 2 (lower is better)
Translates to: SSSRMNRGRDCRLTPMQRMACSS*CFRRYT
Trigger: GGTGTACCGCCGGAAGCACCAGGAGCTGCAAGCCAT...TCGCTGCATTGGGGTGAGCCTGCAATCCCTGCCCCGGTTCATCCTGCTGGAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431873.6
3UTR CAA 90 bp CAGAGCACACTTCAGGCAGCGTCTTCACAGCCACTTGCAGGGGGCTaGGGTCGTTGGGCATTCCGGACACCTGGCCTTCATACACCTCCC +
Preference number: 2 (lower is better)
Translates to: QSTLQAASSQPLAGG*GRWAFRTPGLHTPP
Trigger: GGGAGGTGTATGAAGGCCAGGTGTCCGGAATGCCCAACGACCCAAGCCCCCTGCAAGTGGCTGTGAAGACGCTGCCTGAAGTGTGCTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431873.6
3UTR-3UTR GCA 90 bp GGTTGGACTGAGAGAATGCCATATTCACGTGTCCCCCTTCCACGGCCGGCCCTCATGTCCCGAGCCACGTaGAGAAGGTCCAGCATGGCC +
Preference number: 2 (lower is better)
Translates to: GWTERMPYSRVPLPRPALMSRAT*RRSSMA
Trigger: GGCCATGCTGGACCTTCTGCACGTGGCTCGGGACAT...GAGGGCCGGCCGTGGAAGGGGGACACGTGAATATGGCATTCTCTCAGTCCAACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431873.6
3UTR-3UTR CCA 90 bp TTGCCTGTTGAGAGACCAGGAGAGGAGGAACCCCCTCAGGGTCCTTGGGCCTCAAGGGCAGTTCTTGGGTaGGTCCATCCGGCCTCCACT +
Preference number: 2 (lower is better)
Translates to: LPVERPGEEEPPQGPWASRAVLG*VHPAST
Trigger: AGTGGAGGCCGGATGGACCCACCCAAGAACTGCCCT...TGAGGCCCAAGGACCCTGAGGGGGTTCCTCCTCTCCTGGTCTCTCAACAGGCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431873.6
3UTR-3UTR CCA 90 bp CCACAAGCTGGTGGGCTTGTTTCTGGATCCGTGGACCTTGTGCAACTCCGAAGGTCCCCAAAGGCGCCATaGCCCAGACCCCGAATGAGG +
Preference number: 2 (lower is better)
Translates to: PQAGGLVSGSVDLVQLRRSPKAP*PRPRMR
Trigger: CCTCATTCGGGGTCTGGGCCATGGCGCCTTTGGGGA...CCTTCGGAGTTGCACAAGGTCCACGGATCCAGAAACAAGCCCACCAGCTTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431873.6
3UTR-3UTR CCA 90 bp GGGATCCCAAGGAAGAGAAGTGAGTGTGCGACCGAGCTCAGGGCCCAGGCTGGTGGTTCCACAAGCTGGTaGGCTTGTTTCTGGATCCGT +
Preference number: 2 (lower is better)
Translates to: GIPRKRSECATELRAQAGGSTSW*ACFWIR
Trigger: ACGGATCCAGAAACAAGCCCACCAGCTTGTGGAACC...ACCAGCCTGGGCCCTGAGCTCGGTCGCACACTCACTTCTCTTCCTTGGGATCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431873.6
3UTR-3UTR TCA 90 bp TGCAGCTGTGGGTTTCTTTGCAGCCTTGCCAGAGGAGGTGGTAGGCAGAGGTGGTCCGGCCTCCACTGGTaGCAAACTCCAGAACTTCCT +
Preference number: 2 (lower is better)
Translates to: CSCGFLCSLARGGGRQRWSGLHW*QTPELP
Trigger: AGGAAGTTCTGGAGTTTGTCACCAGTGGAGGCCGGA...CCACCTCTGCCTACCACCTCCTCTGGCAAGGCTGCAAAGAAACCCACAGCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431873.6
3UTR-3UTR TCA 90 bp TGCAGCTGTGGGTTTCTTTGCAGCCTTGCCAGAGGAGGTGGTAGGCAGAGGTGGTCCCGTTTTGCCTGTTaGGAGACCAGGAGAGGAGGA +
Preference number: 2 (lower is better)
Translates to: CSCGFLCSLARGGGRQRWSRFAC*ETRRGG
Trigger: TCCTCCTCTCCTGGTCTCTCAACAGGCAAAACGGGA...CCACCTCTGCCTACCACCTCCTCTGGCAAGGCTGCAAAGAAACCCACAGCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431873.6
3UTR-3UTR GCA 90 bp CCCGTTTTGCCTGTTGAGAGACCAGGAGAGGAGGAACCCCCTCAGGGTCCTTGGTTGTACTCAGGGCTCTaGAGCTCCATCTGCATGGCT +
Preference number: 2 (lower is better)
Translates to: PVLPVERPGEEEPPQGPWLYSGL*SSICMA
Trigger: AGCCATGCAGATGGAGCTGCAGAGCCCTGAGTACAA...CCAAGGACCCTGAGGGGGTTCCTCCTCTCCTGGTCTCTCAACAGGCAAAACGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000431873.6
3UTR-3UTR CCA 90 bp GGGATCCCAAGGAAGAGAAGTGAGTGTGCGACCGAGCTCAGGGCCCAGGCTGGTCCCTCTCCCCTCAAATaGCTCATGTCCACATCAACA +
Preference number: 2 (lower is better)
Translates to: GIPRKRSECATELRAQAGPSPLK*LMSTST
Trigger: TGTTGATGTGGACATGAGCCATTTGAGGGGAGAGGG...ACCAGCCTGGGCCCTGAGCTCGGTCGCACACTCACTTCTCTTCCTTGGGATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431873.6
3UTR-3UTR GCA 90 bp CGGGTCCTGGGTGCAGTATTCAATCCTCTCCAAAATGATGGCAAAGTTGGGCCTGCTTGCAGCTCCTGGTaGTTCCGGCGGTACACCGCT +
Preference number: 2 (lower is better)
Translates to: RVLGAVFNPLQNDGKVGPACSSW*FRRYTA
Trigger: AGCGGTGTACCGCCGGAAGCACCAGGAGCTGCAAGC...AGGCCCAACTTTGCCATCATTTTGGAGAGGATTGAATACTGCACCCAGGACCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431873.6
3UTR-3UTR GCA 90 bp GTTCCACAAGCTGGTGGGCTTGTTTCTGGATCCGTGGACCTTGTGCAACTCCGATCCATCTGCATGGCTTaGAGCTCCTGGTGCTTCCGG +
Preference number: 2 (lower is better)
Translates to: VPQAGGLVSGSVDLVQLRSICMA*SSWCFR
Trigger: CCGGAAGCACCAGGAGCTGCAAGCCATGCAGATGGA...TCGGAGTTGCACAAGGTCCACGGATCCAGAAACAAGCCCACCAGCTTGTGGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431873.6
3UTR-3UTR GCA 90 bp GTTCCACAAGCTGGTGGGCTTGTTTCTGGATCCGTGGACCTTGTGCAACTCCGAGTCTTCACAGCCACTTaGAGGGGGCTTGGGTCGTTG +
Preference number: 2 (lower is better)
Translates to: VPQAGGLVSGSVDLVQLRVFTAT*RGLGSL
Trigger: CAACGACCCAAGCCCCCTGCAAGTGGCTGTGAAGAC...TCGGAGTTGCACAAGGTCCACGGATCCAGAAACAAGCCCACCAGCTTGTGGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431873.6
3UTR-3UTR CCA 90 bp ACTGAGTCATTATCCGGTATACAGGCCCAGGGCAGTTCTTGGGTGGGTCCATCCGGGCATCCACTTAACTaGCAGCATGGCACAGCCTCC +
Preference number: 2 (lower is better)
Translates to: TESLSGIQAQGSSWVGPSGHPLN*QHGTAS
Trigger: GGAGGCTGTGCCATGCTGCCAGTTAAGTGGATGCCC...GGATGGACCCACCCAAGAACTGCCCTGGGCCTGTATACCGGATAATGACTCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431873.6
3UTR CAA 90 bp TCTGTAAACCAGGAGCCGTACGTTGGGTTCCACAAGCTGGTGGGCTaGTTTCTGGATCCGTGGACCTTGTGCAACTCCGAAGGAGGGTTG +
Preference number: 2 (lower is better)
Translates to: SVNQEPYVGFHKLVG*FLDPWTLCNSEGGL
Trigger: CAACCCTCCTTCGGAGTTGCACAAGGTCCACGGATCCAGAAACAAGCCCACCAGCTTGTGGAACCCAACGTACGGCTCCTGGTTTACAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431873.6
3UTR-3UTR TCA 90 bp GAGCTCCAGCAGGATGAACCGGGGCAGGGATTGCAGGCTCACCCCAATGCAGCGGCACAAAACAAAACGTaGCATTTGGTCTCTGGTTTG +
Preference number: 2 (lower is better)
Translates to: ELQQDEPGQGLQAHPNAAAQNKT*HLVSGL
Trigger: CAAACCAGAGACCAAATGTCACGTTTTGTTTTGTGC...CGCTGCATTGGGGTGAGCCTGCAATCCCTGCCCCGGTTCATCCTGCTGGAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000431873.6
3UTR-3UTR GCA 90 bp TCATATTGGCAGTCAGCGAAGAGGGCTCTAGGAGCAGTGAGGCCCCCGGAAGTCCCAGAACTTCCTGGTTaGTTTTGCTGGGGTATGGCA +
Preference number: 2 (lower is better)
Translates to: SYWQSAKRALGAVRPPEVPELPG*FCWGMA
Trigger: TGCCATACCCCAGCAAAAGCAACCAGGAAGTTCTGG...GACTTCCGGGGGCCTCACTGCTCCTAGAGCCCTCTTCGCTGACTGCCAATATGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000431873.6
3UTR-3UTR CCA 90 bp GGGATCCCAAGGAAGAGAAGTGAGTGTGCGACCGAGCTCAGGGCCCAGGCTGGTGTGACATTTGGTCTCTaGTTTGTGAAGGAGCCATTG +
Preference number: 2 (lower is better)
Translates to: GIPRKRSECATELRAQAGVTFGL*FVKEPL
Trigger: CAATGGCTCCTTCACAAACCAGAGACCAAATGTCAC...ACCAGCCTGGGCCCTGAGCTCGGTCGCACACTCACTTCTCTTCCTTGGGATCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431873.6
3UTR-3UTR TCA 90 bp AACAGAGGTACCTCCTTCATATTGGCAGTCAGCGAAGAGGGCTCTAGGAGCAGTGGTTGTAGTCGGTCATaGTGGTCGAGGTGCGGAGCT +
Preference number: 2 (lower is better)
Translates to: NRGTSFILAVSEEGSRSSGCSRS*WSRCGA
Trigger: AGCTCCGCACCTCGACCATCATGACCGACTACAACC...ACTGCTCCTAGAGCCCTCTTCGCTGACTGCCAATATGAAGGAGGTACCTCTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431873.6
3UTR-3UTR TCA 90 bp CGGGTCCTGGGTGCAGTATTCAATCCTCTCCAAAATGATGGCAAAGTTGGGCCTCCTCCTTCAGGTCACTaGTGGAGGAGGTCTTGCCAG +
Preference number: 2 (lower is better)
Translates to: RVLGAVFNPLQNDGKVGPPPSGH*WRRSCQ
Trigger: CTGGCAAGACCTCCTCCATCAGTGACCTGAAGGAGG...AGGCCCAACTTTGCCATCATTTTGGAGAGGATTGAATACTGCACCCAGGACCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431873.6
3UTR-3UTR CCA 90 bp CCACAAGCTGGTGGGCTTGTTTCTGGATCCGTGGACCTTGTGCAACTCCGAAGGTCAAGAGGCAGTTTCTaGCAGCAATGTCTCGGTGGA +
Preference number: 2 (lower is better)
Translates to: PQAGGLVSGSVDLVQLRRSRGSF*QQCLGG
Trigger: TCCACCGAGACATTGCTGCCAGAAACTGCCTCTTGA...CCTTCGGAGTTGCACAAGGTCCACGGATCCAGAAACAAGCCCACCAGCTTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431873.6
3UTR-3UTR CCA 90 bp TTGCCTGTTGAGAGACCAGGAGAGGAGGAACCCCCTCAGGGTCCTTGGGCCTCAAACTCCAGAACTTCCTaGTTGCTTTTGCTGGGGTAT +
Preference number: 2 (lower is better)
Translates to: LPVERPGEEEPPQGPWASNSRTS*LLLLGY
Trigger: ATACCCCAGCAAAAGCAACCAGGAAGTTCTGGAGTT...TGAGGCCCAAGGACCCTGAGGGGGTTCCTCCTCTCCTGGTCTCTCAACAGGCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000431873.6
3UTR-3UTR TCA 90 bp GTTTTTCCGCGGCACCTCCTTCAGGTCACTGATGGAGGAGGTCTTGCCAGCAAATTGGTCTCTGGTTTGTaGAGGAGCCATTGCCTCTCT +
Preference number: 2 (lower is better)
Translates to: VFPRHLLQVTDGGGLASKLVSGL*RSHCLS
Trigger: AGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAA...TTTGCTGGCAAGACCTCCTCCATCAGTGACCTGAAGGAGGTGCCGCGGAAAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431873.6
3UTR-3UTR TCA 90 bp AGCTCCAGCAGGATGAACCGGGGCAGGGATTGCAGGCTCACCCCAATGCAGCGATTCGAAAGAATAGGATaGACCCATGCTCAAAACCTT +
Preference number: 2 (lower is better)
Translates to: SSSRMNRGRDCRLTPMQRFERIG*THAQNL
Trigger: AAGGTTTTGAGCATGGGTTCATCCTATTCTTTCGAA...TCGCTGCATTGGGGTGAGCCTGCAATCCCTGCCCCGGTTCATCCTGCTGGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000431873.6
3UTR-3UTR TCA 90 bp TGGCAGTCAGCGAAGAGGGCTCTAGGAGCAGTGAGGCCCCCGGAAGTCTCCCAGAGAGCACACACAATTTaGAAGAAGCATAAGGAAGTA +
Preference number: 2 (lower is better)
Translates to: WQSAKRALGAVRPPEVSQRAHTI*KKHKEV
Trigger: TACTTCCTTATGCTTCTTTCAAATTGTGTGTGCTCT...CTGGGAGACTTCCGGGGGCCTCACTGCTCCTAGAGCCCTCTTCGCTGACTGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431873.6
3UTR-3UTR GCA 90 bp AACAGAGGTACCTCCTTCATATTGGCAGTCAGCGAAGAGGGCTCTAGGAGCAGTCTCCTCCTCCCGTTTTaGCTGTTGAGAGACCAGGAG +
Preference number: 2 (lower is better)
Translates to: NRGTSFILAVSEEGSRSSLLLPF*LLRDQE
Trigger: CTCCTGGTCTCTCAACAGGCAAAACGGGAGGAGGAG...ACTGCTCCTAGAGCCCTCTTCGCTGACTGCCAATATGAAGGAGGTACCTCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431873.6
3UTR-3UTR CCA 90 bp AGCTCCAGCAGGATGAACCGGGGCAGGGATTGCAGGCTCACCCCAATGCAGCGATTATGCAACCACATCTaGGCCTTGTATTTATCACTC +
Preference number: 2 (lower is better)
Translates to: SSSRMNRGRDCRLTPMQRLCNHI*ALYLSL
Trigger: GAGTGATAAATACAAGGCCCAGATGTGGTTGCATAA...TCGCTGCATTGGGGTGAGCCTGCAATCCCTGCCCCGGTTCATCCTGCTGGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431873.6
3UTR-3UTR CCA 90 bp CAGCCCCAGGTTACCCCTGTCGTGTGGCTCCTTCTTTGCTATAGGATTATTCTTGGCATTCCGGACACCTaGCCTTCATACACCTCCCCA +
Preference number: 2 (lower is better)
Translates to: QPQVTPVVWLLLCYRIILGIPDT*PSYTSP
Trigger: TGGGGAGGTGTATGAAGGCCAGGTGTCCGGAATGCC...AAGAATAATCCTATAGCAAAGAAGGAGCCACACGACAGGGGTAACCTGGGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000431873.6
3UTR-3UTR CCA 90 bp AGGCACTTTCTCTTCCTCTTCCACAAGTGGACCATATTCTATCGGCAAAGCGGTCACTTGCAGGGGGCTTaGGTCGTTGGGCATTCCGGA +
Preference number: 2 (lower is better)
Translates to: RHFLFLFHKWTIFYRQSGHLQGA*VVGHSG
Trigger: TCCGGAATGCCCAACGACCCAAGCCCCCTGCAAGTG...ACCGCTTTGCCGATAGAATATGGTCCACTTGTGGAAGAGGAAGAGAAAGTGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431873.6
3UTR CAA 90 bp CCTCTCCAAAATGATGGCAAAGTTGGGCCTGTCTTCAGGCTGATGTaGCCAGCACTGAGTCATTATCCGGTATACAGGCCCAGGGCAGTT +
Preference number: 2 (lower is better)
Translates to: PLQNDGKVGPVFRLM*PALSHYPVYRPRAV
Trigger: AACTGCCCTGGGCCTGTATACCGGATAATGACTCAGTGCTGGCAACATCAGCCTGAAGACAGGCCCAACTTTGCCATCATTTTGGAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431873.6
3UTR-3UTR TCA 90 bp ACTGAGTCATTATCCGGTATACAGGCCCAGGGCAGTTCTTGGGTGGGTCCATCCTTTTCCTCCAAATACTaGCAGCCACAGGCAATGTCC +
Preference number: 2 (lower is better)
Translates to: TESLSGIQAQGSSWVGPSFSSKY*QPQAMS
Trigger: GGACATTGCCTGTGGCTGTCAGTATTTGGAGGAAAA...GGATGGACCCACCCAAGAACTGCCCTGGGCCTGTATACCGGATAATGACTCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431873.6
3UTR-3UTR GCA 90 bp ACATCCGGGTCCTGGGTGCAGTATTCAATCCTCTCCAAAATGATGGCAAAGTTGTCGAGGTGCGGAGCTTaGTCAGCTTGTACTCAGGGC +
Preference number: 2 (lower is better)
Translates to: TSGSWVQYSILSKMMAKLSRCGA*SACTQG
Trigger: GCCCTGAGTACAAGCTGAGCAAGCTCCGCACCTCGA...CAACTTTGCCATCATTTTGGAGAGGATTGAATACTGCACCCAGGACCCGGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431873.6
3UTR-3UTR GCA 90 bp AACAGAGGTACCTCCTTCATATTGGCAGTCAGCGAAGAGGGCTCTAGGAGCAGTGCAGGCTCACCCCAATaGAGCGAACAATGTTCTGGT +
Preference number: 2 (lower is better)
Translates to: NRGTSFILAVSEEGSRSSAGSPQ*SEQCSG
Trigger: ACCAGAACATTGTTCGCTGCATTGGGGTGAGCCTGC...ACTGCTCCTAGAGCCCTCTTCGCTGACTGCCAATATGAAGGAGGTACCTCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431873.6
3UTR-3UTR CCA 90 bp ACATCCGGGTCCTGGGTGCAGTATTCAATCCTCTCCAAAATGATGGCAAAGTTGGCAGCTCCATCTGCATaGCTTGCAGCTCCTGGTGCT +
Preference number: 2 (lower is better)
Translates to: TSGSWVQYSILSKMMAKLAAPSA*LAAPGA
Trigger: AGCACCAGGAGCTGCAAGCCATGCAGATGGAGCTGC...CAACTTTGCCATCATTTTGGAGAGGATTGAATACTGCACCCAGGACCCGGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431873.6
3UTR-3UTR CCA 90 bp CAGCCCCAGGTTACCCCTGTCGTGTGGCTCCTTCTTTGCTATAGGATTATTCTTCACTCTTCCAGGGCCTaGACAGGTCAAGAGGCAGTT +
Preference number: 2 (lower is better)
Translates to: QPQVTPVVWLLLCYRIILHSSRA*TGQEAV
Trigger: AACTGCCTCTTGACCTGTCCAGGCCCTGGAAGAGTG...AAGAATAATCCTATAGCAAAGAAGGAGCCACACGACAGGGGTAACCTGGGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431873.6
3UTR-3UTR GCA 90 bp GACTCGAACAGAGATCTCTGCAGCTGTGGGTTTCTTTGCAGCCTTGCCAGAGGACTTCCTGGTTGCTTTTaGTGGGGTATGGCATATATC +
Preference number: 2 (lower is better)
Translates to: DSNRDLCSCGFLCSLARGLPGCF*WGMAYI
Trigger: GATATATGCCATACCCCAGCAAAAGCAACCAGGAAG...TCCTCTGGCAAGGCTGCAAAGAAACCCACAGCTGCAGAGATCTCTGTTCGAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431873.6
3UTR-3UTR GCA 90 bp TCCGTGGACCTTGTGCAACTCCGAAGGAGGGTTGGACTGAGAGAATGCCATATTTCGAACAGAGATCTCTaGAGCTGTGGGTTTCTTTGC +
Preference number: 2 (lower is better)
Translates to: SVDLVQLRRRVGLRECHISNRDL*SCGFLC
Trigger: GCAAAGAAACCCACAGCTGCAGAGATCTCTGTTCGA...AATATGGCATTCTCTCAGTCCAACCCTCCTTCGGAGTTGCACAAGGTCCACGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431873.6
3UTR-3UTR CCA 90 bp AGGCACTTTCTCTTCCTCTTCCACAAGTGGACCATATTCTATCGGCAAAGCGGTGCAGCAATGTCTCGGTaGATGAAGTGGTTTTCCTCC +
Preference number: 2 (lower is better)
Translates to: RHFLFLFHKWTIFYRQSGAAMSR*MKWFSS
Trigger: GGAGGAAAACCACTTCATCCACCGAGACATTGCTGC...ACCGCTTTGCCGATAGAATATGGTCCACTTGTGGAAGAGGAAGAGAAAGTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431873.6
3UTR-3UTR CCA 90 bp CAGCCCCAGGTTACCCCTGTCGTGTGGCTCCTTCTTTGCTATAGGATTATTCTTACTCCGAAGGAGGGTTaGACTGAGAGAATGCCATAT +
Preference number: 2 (lower is better)
Translates to: QPQVTPVVWLLLCYRIILTPKEG*TERMPY
Trigger: ATATGGCATTCTCTCAGTCCAACCCTCCTTCGGAGT...AAGAATAATCCTATAGCAAAGAAGGAGCCACACGACAGGGGTAACCTGGGGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431873.6
3UTR CAA 90 bp TTACCCCTGTCGTGTGGCTCCTTCTTTGCTATAGGATTATTCTTTTaGGTGGGTTTCTCTGTAAACCAGGAGCCGTACGTTGGGTTCCAC +
Preference number: 2 (lower is better)
Translates to: LPLSCGSFFAIGLFF*VGFSVNQEPYVGFH
Trigger: GTGGAACCCAACGTACGGCTCCTGGTTTACAGAGAAACCCACCAAAAAGAATAATCCTATAGCAAAGAAGGAGCCACACGACAGGGGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431873.6
3UTR-3UTR GCA 90 bp AACAGAGGTACCTCCTTCATATTGGCAGTCAGCGAAGAGGGCTCTAGGAGCAGTTGCATAAAAACCTTATaGAACCACATCTGGGCCTTG +
Preference number: 2 (lower is better)
Translates to: NRGTSFILAVSEEGSRSSCIKTL*NHIWAL
Trigger: CAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCA...ACTGCTCCTAGAGCCCTCTTCGCTGACTGCCAATATGAAGGAGGTACCTCTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431873.6
3UTR-3UTR CCA 90 bp GGCACTTTCTCTTCCTCTTCCACAAGTGGACCATATTCTATCGGCAAAGCGGTGCGAACAATGTTCTGGTaGTTGAATTTGCTGATGATC +
Preference number: 2 (lower is better)
Translates to: GTFSSSSTSGPYSIGKAVRTMFW*LNLLMI
Trigger: GATCATCAGCAAATTCAACCACCAGAACATTGTTCG...CACCGCTTTGCCGATAGAATATGGTCCACTTGTGGAAGAGGAAGAGAAAGTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431873.6
3UTR-3UTR CCA 90 bp AGGCACTTTCTCTTCCTCTTCCACAAGTGGACCATATTCTATCGGCAAAGCGGTCAGCGAACAATGTTCTaGTGGTTGAATTTGCTGATG +
Preference number: 2 (lower is better)
Translates to: RHFLFLFHKWTIFYRQSGQRTMF*WLNLLM
Trigger: CATCAGCAAATTCAACCACCAGAACATTGTTCGCTG...ACCGCTTTGCCGATAGAATATGGTCCACTTGTGGAAGAGGAAGAGAAAGTGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431873.6
3UTR-3UTR TCA 90 bp AACATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATTTGGTCTCTGGTTTGTaGAGGAGCCATTGCCTCTCT +
Preference number: 2 (lower is better)
Translates to: NMHKNLMQPHLGLVFITHLVSGL*RSHCLS
Trigger: AGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAA...ATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCATGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
3UTR-3UTR TCA 90 bp ATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATTTTTTGGTCTCTGGTTTGTaGAGGAGCCATTGCCTCTCT +
Preference number: 2 (lower is better)
Translates to: MHKNLMQPHLGLVFITHFLVSGL*RSHCLS
Trigger: AGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAA...AAAATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCAT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
3UTR-3UTR CCA 90 bp ATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATTTTGTGACATTTGGTCTCTaGTTTGTGAAGGAGCCATTG +
Preference number: 2 (lower is better)
Translates to: MHKNLMQPHLGLVFITHFVTFGL*FVKEPL
Trigger: CAATGGCTCCTTCACAAACCAGAGACCAAATGTCAC...AAAATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
3UTR-3UTR TCA 90 bp ATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATTTTGCACAAAACAAAACGTaGCATTTGGTCTCTGGTTTG +
Preference number: 2 (lower is better)
Translates to: MHKNLMQPHLGLVFITHFAQNKT*HLVSGL
Trigger: CAAACCAGAGACCAAATGTCACGTTTTGTTTTGTGC...AAAATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
3UTR-3UTR TCA 90 bp AACATAGAAGCAGCTAATTCTGACTACATTGAAGCAGAGCACACACAATTTGAATTCGAAAGAATAGGATaGACCCATGCTCAAAACCTT +
Preference number: 2 (lower is better)
Translates to: NIEAANSDYIEAEHTQFEFERIG*THAQNL
Trigger: AAGGTTTTGAGCATGGGTTCATCCTATTCTTTCGAA...TTCAAATTGTGTGTGCTCTGCTTCAATGTAGTCAGAATTAGCTGCTTCTATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
3UTR-3UTR CCA 90 bp AACATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATACAAAACGTGACATTTaGTCTCTGGTTTGTGAAGGA +
Preference number: 2 (lower is better)
Translates to: NMHKNLMQPHLGLVFITHTKRDI*SLVCEG
Trigger: TCCTTCACAAACCAGAGACCAAATGTCACGTTTTGT...ATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCATGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
3UTR TCA 72 bp GCAGCTGGGCTGCGCTCCTCCTCCCGTTTTGCCTGTTaGGAGACCAGGAGAGGAGGAACCCCCTCAGGGTCC +
Preference number: 3 (lower is better)
Translates to: AAGLRSSSRFAC*ETRRGGTPSGS
Trigger: GGACCCTGAGGGGGTTCCTCCTCTCCTGGTCTCTCAACAGGCAAAACGGGAGGAGGAGCGCAGCCCAGCTGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000431873.6
3UTR-3UTR CAA 90 bp ATATTGGCAGTCAGCGAAGAGGGCTCTAGGAGCAGTGAGGCCCCCGGAAGTCTCGGCCCAGGGCAGTTCTaGGGTGGGTCCATCCGGCCT +
Preference number: 3 (lower is better)
Translates to: ILAVSEEGSRSSEAPGSLGPGQF*GGSIRP
Trigger: AGGCCGGATGGACCCACCCAAGAACTGCCCTGGGCC...GAGACTTCCGGGGGCCTCACTGCTCCTAGAGCCCTCTTCGCTGACTGCCAATAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431873.6
3UTR-3UTR CAA 90 bp TTGCCTGTTGAGAGACCAGGAGAGGAGGAACCCCCTCAGGGTCCTTGGGCCTCAGAACCGGGGCAGGGATaGCAGGCTCACCCCAATGCA +
Preference number: 3 (lower is better)
Translates to: LPVERPGEEEPPQGPWASEPGQG*QAHPNA
Trigger: TGCATTGGGGTGAGCCTGCAATCCCTGCCCCGGTTC...TGAGGCCCAAGGACCCTGAGGGGGTTCCTCCTCTCCTGGTCTCTCAACAGGCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000431873.6
3UTR GCA 72 bp TTGTACTCAGGGCTCTGCAGCTCCATCTGCATGGCTTaGAGCTCCTGGTGCTTCCGGCGGTACACCGCTATG +
Preference number: 3 (lower is better)
Translates to: LYSGLCSSICMA*SSWCFRRYTAM
Trigger: CATAGCGGTGTACCGCCGGAAGCACCAGGAGCTGCAAGCCATGCAGATGGAGCTGCAGAGCCCTGAGTACAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431873.6
3UTR GCA 72 bp GCCATGAGCTCCAGCAGGATGAACCGGGGCAGGGATTaGAGGCTCACCCCAATGCAGCGAACAATGTTCTGG +
Preference number: 3 (lower is better)
Translates to: AMSSSRMNRGRD*RLTPMQRTMFW
Trigger: CCAGAACATTGTTCGCTGCATTGGGGTGAGCCTGCAATCCCTGCCCCGGTTCATCCTGCTGGAGCTCATGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431873.6
3UTR GCA 72 bp CTTGTGCAACTCCGAAGGAGGGTTGGACTGAGAGAATaGCATATTCACGTGTCCCCCTTCCACGGCCGGCCC +
Preference number: 3 (lower is better)
Translates to: LVQLRRRVGLRE*HIHVSPFHGRP
Trigger: GGGCCGGCCGTGGAAGGGGGACACGTGAATATGGCATTCTCTCAGTCCAACCCTCCTTCGGAGTTGCACAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431873.6
3UTR CCA 72 bp TTCAGGCAGCGTCTTCACAGCCACTTGCAGGGGGCTTaGGTCGTTGGGCATTCCGGACACCTGGCCTTCATA +
Preference number: 3 (lower is better)
Translates to: FRQRLHSHLQGA*VVGHSGHLAFI
Trigger: TATGAAGGCCAGGTGTCCGGAATGCCCAACGACCCAAGCCCCCTGCAAGTGGCTGTGAAGACGCTGCCTGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431873.6
3UTR-3UTR CAA 90 bp TTGCCTGTTGAGAGACCAGGAGAGGAGGAACCCCCTCAGGGTCCTTGGGCCTCATTTGTGAAGGAGCCATaGCCTCTCTCTCCTCCACGG +
Preference number: 3 (lower is better)
Translates to: LPVERPGEEEPPQGPWASFVKEP*PLSPPR
Trigger: CCGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAA...TGAGGCCCAAGGACCCTGAGGGGGTTCCTCCTCTCCTGGTCTCTCAACAGGCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431873.6
3UTR-3UTR CAA 90 bp TTCATATTGGCAGTCAGCGAAGAGGGCTCTAGGAGCAGTGAGGCCCCCGGAAGTCTGGATCCGTGGACCTaGTGCAACTCCGAAGGAGGG +
Preference number: 3 (lower is better)
Translates to: FILAVSEEGSRSSEAPGSLDPWT*CNSEGG
Trigger: CCCTCCTTCGGAGTTGCACAAGGTCCACGGATCCAG...ACTTCCGGGGGCCTCACTGCTCCTAGAGCCCTCTTCGCTGACTGCCAATATGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431873.6
3UTR-3UTR CAA 90 bp TTCACGTGTCCCCCTTCCACGGCCGGCCCTCTAGGGACTCGAACAGAGATCTCTTCCAGAACTTCCTGGTaGCTTTTGCTGGGGTATGGC +
Preference number: 3 (lower is better)
Translates to: FTCPPSTAGPLGTRTEISSRTSW*LLLGYG
Trigger: GCCATACCCCAGCAAAAGCAACCAGGAAGTTCTGGA...AGAGATCTCTGTTCGAGTCCCTAGAGGGCCGGCCGTGGAAGGGGGACACGTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000431873.6
3UTR CCA 72 bp CGTACGTTGGGTTCCACAAGCTGGTGGGCTTGTTTCTaGATCCGTGGACCTTGTGCAACTCCGAAGGAGGGT +
Preference number: 3 (lower is better)
Translates to: RTLGSTSWWACF*IRGPCATPKEG
Trigger: ACCCTCCTTCGGAGTTGCACAAGGTCCACGGATCCAGAAACAAGCCCACCAGCTTGTGGAACCCAACGTACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431873.6
3UTR TCA 72 bp TGCCAGCAAAGCAGTAGTTGGGGTTGTAGTCGGTCATaGTGGTCGAGGTGCGGAGCTTGCTCAGCTTGTACT +
Preference number: 3 (lower is better)
Translates to: CQQSSSWGCSRS*WSRCGACSACT
Trigger: AGTACAAGCTGAGCAAGCTCCGCACCTCGACCATCATGACCGACTACAACCCCAACTACTGCTTTGCTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431873.6
3UTR CCA 72 bp TGGATCCGTGGACCTTGTGCAACTCCGAAGGAGGGTTaGACTGAGAGAATGCCATATTCACGTGTCCCCCTT +
Preference number: 3 (lower is better)
Translates to: WIRGPCATPKEG*TERMPYSRVPL
Trigger: AAGGGGGACACGTGAATATGGCATTCTCTCAGTCCAACCCTCCTTCGGAGTTGCACAAGGTCCACGGATCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431873.6
3UTR-3UTR CAA 90 bp AGGCACTTTCTCTTCCTCTTCCACAAGTGGACCATATTCTATCGGCAAAGCGGTGTCGAGGTGCGGAGCTaGCTCAGCTTGTACTCAGGG +
Preference number: 3 (lower is better)
Translates to: RHFLFLFHKWTIFYRQSGVEVRS*LSLYSG
Trigger: CCCTGAGTACAAGCTGAGCAAGCTCCGCACCTCGAC...ACCGCTTTGCCGATAGAATATGGTCCACTTGTGGAAGAGGAAGAGAAAGTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431873.6
3UTR-3UTR CAA 90 bp AGGCACTTTCTCTTCCTCTTCCACAAGTGGACCATATTCTATCGGCAAAGCGGTCGTCTTCACAGCCACTaGCAGGGGGCTTGGGTCGTT +
Preference number: 3 (lower is better)
Translates to: RHFLFLFHKWTIFYRQSGRLHSH*QGAWVV
Trigger: AACGACCCAAGCCCCCTGCAAGTGGCTGTGAAGACG...ACCGCTTTGCCGATAGAATATGGTCCACTTGTGGAAGAGGAAGAGAAAGTGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431873.6
3UTR CCA 72 bp TTTGGTGGGTTTCTCTGTAAACCAGGAGCCGTACGTTaGGTTCCACAAGCTGGTGGGCTTGTTTCTGGATCC +
Preference number: 3 (lower is better)
Translates to: FGGFLCKPGAVR*VPQAGGLVSGS
Trigger: GGATCCAGAAACAAGCCCACCAGCTTGTGGAACCCAACGTACGGCTCCTGGTTTACAGAGAAACCCACCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431873.6
3UTR GCA 72 bp ACCGAGCTCAGGGCCCAGGCTGGTTCATGCTATTCTTaGTTTTCAGAATGGTATCCTCGTAATGACCAGCTC +
Preference number: 3 (lower is better)
Translates to: TELRAQAGSCYS*FSEWYPRNDQL
Trigger: GAGCTGGTCATTACGAGGATACCATTCTGAAAAGCAAGAATAGCATGAACCAGCCTGGGCCCTGAGCTCGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431873.6
3UTR-3UTR CAA 90 bp GTTCCACAAGCTGGTGGGCTTGTTTCTGGATCCGTGGACCTTGTGCAACTCCGAACAATGTTCTGGTGGTaGAATTTGCTGATGATCAGG +
Preference number: 3 (lower is better)
Translates to: VPQAGGLVSGSVDLVQLRTMFWW*NLLMIR
Trigger: CCTGATCATCAGCAAATTCAACCACCAGAACATTGT...TCGGAGTTGCACAAGGTCCACGGATCCAGAAACAAGCCCACCAGCTTGTGGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431873.6
3UTR TCA 72 bp CCACAAGTGGACCATATTCTATCGGCAAAGCGGTGTTaGTTACATCCGGGTCCTGGGTGCAGTATTCAATCC +
Preference number: 3 (lower is better)
Translates to: PQVDHILSAKRC*LHPGPGCSIQS
Trigger: GGATTGAATACTGCACCCAGGACCCGGATGTAATCAACACCGCTTTGCCGATAGAATATGGTCCACTTGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431873.6
3UTR CCA 72 bp GATTGCAGGCTCACCCCAATGCAGCGAACAATGTTCTaGTGGTTGAATTTGCTGATGATCAGGGCTTCCATG +
Preference number: 3 (lower is better)
Translates to: DCRLTPMQRTMF*WLNLLMIRASM
Trigger: CATGGAAGCCCTGATCATCAGCAAATTCAACCACCAGAACATTGTTCGCTGCATTGGGGTGAGCCTGCAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431873.6
3UTR CCA 72 bp ATCCGGCCTCCACTGGTGACAAACTCCAGAACTTCCTaGTTGCTTTTGCTGGGGTATGGCATATATCCAAGA +
Preference number: 3 (lower is better)
Translates to: IRPPLVTNSRTS*LLLLGYGIYPR
Trigger: TCTTGGATATATGCCATACCCCAGCAAAAGCAACCAGGAAGTTCTGGAGTTTGTCACCAGTGGAGGCCGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431873.6
3UTR-3UTR CAA 90 bp AGGCACTTTCTCTTCCTCTTCCACAAGTGGACCATATTCTATCGGCAAAGCGGTGTCTTCAGGCTGATGTaGCCAGCACTGAGTCATTAT +
Preference number: 3 (lower is better)
Translates to: RHFLFLFHKWTIFYRQSGVFRLM*PALSHY
Trigger: ATAATGACTCAGTGCTGGCAACATCAGCCTGAAGAC...ACCGCTTTGCCGATAGAATATGGTCCACTTGTGGAAGAGGAAGAGAAAGTGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431873.6
3UTR CAA 72 bp GGCAGCTGGGCTGCGCTCCTCCTCCCGTTTTGCCTGTaGAGAGACCAGGAGAGGAGGAACCCCCTCAGGGTC +
Preference number: 4 (lower is better)
Translates to: GSWAALLLPFCL*RDQERRNPLRV
Trigger: GACCCTGAGGGGGTTCCTCCTCTCCTGGTCTCTCAACAGGCAAAACGGGAGGAGGAGCGCAGCCCAGCTGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000431873.6
CDS-3UTR GCA 90 bp AGCTCCAGCAGGATGAACCGGGGCAGGGATTGCAGGCTCACCCCAATGCAGCGAGCTTGCAGCTCCTGGTaGTTCCGGCGGTACACCGCT +
Preference number: 4 (lower is better)
Translates to: SSSRMNRGRDCRLTPMQRACSSW*FRRYTA
Trigger: AGCGGTGTACCGCCGGAAGCACCAGGAGCTGCAAGC...TCGCTGCATTGGGGTGAGCCTGCAATCCCTGCCCCGGTTCATCCTGCTGGAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431873.6
CDS-3UTR TCA 90 bp CGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCACGCCGGCCCCAGCAACCTaGGCAGCGGGGCGCAGTCCA +
Preference number: 4 (lower is better)
Translates to: RDIWSLVCEGAIASLSSTPAPAT*AAGRSP
Trigger: TGGACTGCGCCCCGCTGCTCAGGTTGCTGGGGCCGG...CGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS-3UTR GCA 90 bp TGGCAGTCAGCGAAGAGGGCTCTAGGAGCAGTGAGGCCCCCGGAAGTCTCCCAGGGGTGGGTGACACAATaGAGGAGACGCCATCCTCAG +
Preference number: 4 (lower is better)
Translates to: WQSAKRALGAVRPPEVSQGWVTQ*RRRHPQ
Trigger: CTGAGGATGGCGTCTCCTGCATTGTGTCACCCACCC...CTGGGAGACTTCCGGGGGCCTCACTGCTCCTAGAGCCCTCTTCGCTGACTGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000431873.6
CDS-3UTR GCA 90 bp AGCTCCAGCAGGATGAACCGGGGCAGGGATTGCAGGCTCACCCCAATGCAGCGAATGTCCCGAGCCACGTaGAGAAGGTCCAGCATGGCC +
Preference number: 4 (lower is better)
Translates to: SSSRMNRGRDCRLTPMQRMSRAT*RRSSMA
Trigger: GGCCATGCTGGACCTTCTGCACGTGGCTCGGGACAT...TCGCTGCATTGGGGTGAGCCTGCAATCCCTGCCCCGGTTCATCCTGCTGGAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431873.6
CDS-3UTR TCA 90 bp GGGATCCCAAGGAAGAGAAGTGAGTGTGCGACCGAGCTCAGGGCCCAGGCTGGTTCGGCAAAGCGGTGTTaGTTACATCCGGGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: GIPRKRSECATELRAQAGSAKRC*LHPGPG
Trigger: CCCAGGACCCGGATGTAATCAACACCGCTTTGCCGA...ACCAGCCTGGGCCCTGAGCTCGGTCGCACACTCACTTCTCTTCCTTGGGATCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431873.6
CDS-3UTR CCA 90 bp CGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCACGGCGCGAGTAGCTGAGTaGCTCCCGGGGCTGCAGCGG +
Preference number: 4 (lower is better)
Translates to: RDIWSLVCEGAIASLSSTARVAE*LPGLQR
Trigger: CCGCTGCAGCCCCGGGAGCCACTCAGCTACTCGCGC...CGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS-3UTR CCA 90 bp GCCATTGCCTCTCTCTCCTCCACGGTCTTAGGGATCCCAAGGAAGAGAAGTGAGCGCCCTTCAGCACCCTaGACAGCGTCCGGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: AIASLSSTVLGIPRKRSERPSAP*TASGPL
Trigger: CAGAGGCCCGGACGCTGTCCAGGGTGCTGAAGGGCG...CTCACTTCTCTTCCTTGGGATCCCTAAGACCGTGGAGGAGAGAGAGGCAATGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS-3UTR CCA 90 bp TCATATTGGCAGTCAGCGAAGAGGGCTCTAGGAGCAGTGAGGCCCCCGGAAGTCGAGGATCAGCGAGAGTaGCAGGTGTGGCTCCGGGGT +
Preference number: 4 (lower is better)
Translates to: SYWQSAKRALGAVRPPEVEDQRE*QVWLRG
Trigger: ACCCCGGAGCCACACCTGCCACTCTCGCTGATCCTC...GACTTCCGGGGGCCTCACTGCTCCTAGAGCCCTCTTCGCTGACTGCCAATATGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000431873.6
CDS-3UTR CCA 90 bp TTCACGTGTCCCCCTTCCACGGCCGGCCCTCTAGGGACTCGAACAGAGATCTCTCACTTGCAGGGGGCTTaGGTCGTTGGGCATTCCGGA +
Preference number: 4 (lower is better)
Translates to: FTCPPSTAGPLGTRTEISHLQGA*VVGHSG
Trigger: TCCGGAATGCCCAACGACCCAAGCCCCCTGCAAGTG...AGAGATCTCTGTTCGAGTCCCTAGAGGGCCGGCCGTGGAAGGGGGACACGTGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000431873.6
CDS-3UTR CCA 90 bp TGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCACGGTCTTAGGGGGTGGTAGGCAGAGGTaGTGGGGCAGCTGGGCTGCG +
Preference number: 4 (lower is better)
Translates to: WSLVCEGAIASLSSTVLGGGRQR*WGSWAA
Trigger: CGCAGCCCAGCTGCCCCACCACCTCTGCCTACCACC...CCCTAAGACCGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
3UTR CAA 72 bp CTTCAGGCAGCGTCTTCACAGCCACTTGCAGGGGGCTaGGGTCGTTGGGCATTCCGGACACCTGGCCTTCAT +
Preference number: 4 (lower is better)
Translates to: LQAASSQPLAGG*GRWAFRTPGLH
Trigger: ATGAAGGCCAGGTGTCCGGAATGCCCAACGACCCAAGCCCCCTGCAAGTGGCTGTGAAGACGCTGCCTGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431873.6
CDS-3UTR TCA 90 bp AGCTCCAGCAGGATGAACCGGGGCAGGGATTGCAGGCTCACCCCAATGCAGCGATCCCGTTTTGCCTGTTaGGAGACCAGGAGAGGAGGA +
Preference number: 4 (lower is better)
Translates to: SSSRMNRGRDCRLTPMQRSRFAC*ETRRGG
Trigger: TCCTCCTCTCCTGGTCTCTCAACAGGCAAAACGGGA...TCGCTGCATTGGGGTGAGCCTGCAATCCCTGCCCCGGTTCATCCTGCTGGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000431873.6
CDS-3UTR GCA 90 bp TGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCACGGTCTTAGGGTCCCAGCCCCCGCGCTaGGCAAGTTTGCAGCGTCCT +
Preference number: 4 (lower is better)
Translates to: WSLVCEGAIASLSSTVLGSQPPR*ASLQRP
Trigger: AGGACGCTGCAAACTTGCGCAGCGCGGGGGCTGGGA...CCCTAAGACCGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS-3UTR GCA 90 bp TGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCACGGTCTTAGGGCTGGGAGGCGCGAATTaGCGCGGACAGCCTTCCCTC +
Preference number: 4 (lower is better)
Translates to: WSLVCEGAIASLSSTVLGLGGAN*RGQPSL
Trigger: GAGGGAAGGCTGTCCGCGGCAATTCGCGCCTCCCAG...CCCTAAGACCGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS-3UTR GCA 90 bp TGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCACGGTCTTAGGGGCCACCACCTCCGGCTaGAATGATCAGGGGCACCGG +
Preference number: 4 (lower is better)
Translates to: WSLVCEGAIASLSSTVLGATTSG*NDQGHR
Trigger: CCGGTGCCCCTGATCATTGCAGCCGGAGGTGGTGGC...CCCTAAGACCGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR GCA 90 bp CGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCACGTGGCCCCGTAGGCCCTaGCACCACCTCCGGCTGCAA +
Preference number: 4 (lower is better)
Translates to: RDIWSLVCEGAIASLSSTWPRRP*HHLRLQ
Trigger: TTGCAGCCGGAGGTGGTGGCAGGGCCTACGGGGCCA...CGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CCA 90 bp TTCACGTGTCCCCCTTCCACGGCCGGCCCTCTAGGGACTCGAACAGAGATCTCTGGCATTCCGGACACCTaGCCTTCATACACCTCCCCA +
Preference number: 4 (lower is better)
Translates to: FTCPPSTAGPLGTRTEISGIPDT*PSYTSP
Trigger: TGGGGAGGTGTATGAAGGCCAGGTGTCCGGAATGCC...AGAGATCTCTGTTCGAGTCCCTAGAGGGCCGGCCGTGGAAGGGGGACACGTGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000431873.6
CDS-3UTR CCA 90 bp GCCATTGCCTCTCTCTCCTCCACGGTCTTAGGGATCCCAAGGAAGAGAAGTGAGGCAGAAGGTCCAGCATaGCCAGGGAGGAGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: AIASLSSTVLGIPRKRSEAEGPA*PGRRAG
Trigger: GCCAGCCCTCCTCCCTGGCCATGCTGGACCTTCTGC...CTCACTTCTCTTCCTTGGGATCCCTAAGACCGTGGAGGAGAGAGAGGCAATGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp ATATTGGCAGTCAGCGAAGAGGGCTCTAGGAGCAGTGAGGCCCCCGGAAGTCTCAGGGCAGTTCTTGGGTaGGTCCATCCGGCCTCCACT +
Preference number: 4 (lower is better)
Translates to: ILAVSEEGSRSSEAPGSLRAVLG*VHPAST
Trigger: AGTGGAGGCCGGATGGACCCACCCAAGAACTGCCCT...GAGACTTCCGGGGGCCTCACTGCTCCTAGAGCCCTCTTCGCTGACTGCCAATAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431873.6
CDS-3UTR TCA 90 bp CTCTCCTCCACGGTCTTAGGGATCCCAAGGAAGAGAAGTGAGTGTGCGACCGAGACCAGCTCTGGTTCCTaGGGTCATGCAGTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: LSSTVLGIPRKRSECATETSSGS*GHAVEG
Trigger: CCCCTCCACTGCATGACCTCAGGAACCAGAGCTGGT...CTCGGTCGCACACTCACTTCTCTTCCTTGGGATCCCTAAGACCGTGGAGGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR GCA 90 bp GCCATTGCCTCTCTCTCCTCCACGGTCTTAGGGATCCCAAGGAAGAGAAGTGAGAGTTTGCAGCGTCCTTaGTCTCACCGGCGCCTCGGC +
Preference number: 4 (lower is better)
Translates to: AIASLSSTVLGIPRKRSESLQRP*SHRRLG
Trigger: GCCGAGGCGCCGGTGAGAGCAAGGACGCTGCAAACT...CTCACTTCTCTTCCTTGGGATCCCTAAGACCGTGGAGGAGAGAGAGGCAATGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS-3UTR GCA 90 bp CGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCACGACCGAGGGCGGAGGCTaGCGTCTTGCGCACCCTCAA +
Preference number: 4 (lower is better)
Translates to: RDIWSLVCEGAIASLSSTTEGGG*RLAHPQ
Trigger: TTGAGGGTGCGCAAGACGGCAGCCTCCGCCCTCGGT...CGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS-3UTR GCA 90 bp CTCTCCTCCACGGTCTTAGGGATCCCAAGGAAGAGAAGTGAGTGTGCGACCGAGCCTTCCAGATCTGGATaGCTTTCAGGGGGCCCTCGC +
Preference number: 4 (lower is better)
Translates to: LSSTVLGIPRKRSECATEPSRSG*LSGGPR
Trigger: GCGAGGGCCCCCTGAAAGGCATCCAGATCTGGAAGG...CTCGGTCGCACACTCACTTCTCTTCCTTGGGATCCCTAAGACCGTGGAGGAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR GCA 90 bp ATATTGGCAGTCAGCGAAGAGGGCTCTAGGAGCAGTGAGGCCCCCGGAAGTCTCCTCTGCAGCTCCATCTaGATGGCTTGCAGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: ILAVSEEGSRSSEAPGSLLCSSI*MACSSW
Trigger: CCAGGAGCTGCAAGCCATGCAGATGGAGCTGCAGAG...GAGACTTCCGGGGGCCTCACTGCTCCTAGAGCCCTCTTCGCTGACTGCCAATAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431873.6
CDS-3UTR GCA 90 bp TTCATATTGGCAGTCAGCGAAGAGGGCTCTAGGAGCAGTGAGGCCCCCGGAAGTAACCGGGGCAGGGATTaGAGGCTCACCCCAATGCAG +
Preference number: 4 (lower is better)
Translates to: FILAVSEEGSRSSEAPGSNRGRD*RLTPMQ
Trigger: CTGCATTGGGGTGAGCCTGCAATCCCTGCCCCGGTT...ACTTCCGGGGGCCTCACTGCTCCTAGAGCCCTCTTCGCTGACTGCCAATATGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000431873.6
CDS-3UTR CCA 90 bp TGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCACGGTCTTAGGGACTGGGCTCACTGGCTaGGACCTTGAGCCTCCCGCT +
Preference number: 4 (lower is better)
Translates to: WSLVCEGAIASLSSTVLGTGLTG*DLEPPA
Trigger: AGCGGGAGGCTCAAGGTCCCAGCCAGTGAGCCCAGT...CCCTAAGACCGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS-3UTR CCA 90 bp GCCATTGCCTCTCTCTCCTCCACGGTCTTAGGGATCCCAAGGAAGAGAAGTGAGCCCTGGGCACAGTCCTaGTGGAAGTCACAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: AIASLSSTVLGIPRKRSEPWAQS*WKSQAC
Trigger: GCAGGCCTGTGACTTCCACCAGGACTGTGCCCAGGG...CTCACTTCTCTTCCTTGGGATCCCTAAGACCGTGGAGGAGAGAGAGGCAATGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CCA 90 bp GCCATTGCCTCTCTCTCCTCCACGGTCTTAGGGATCCCAAGGAAGAGAAGTGAGGGAACGTGTCTGTCTTaGCCCCGTAGGCCCTGCCAC +
Preference number: 4 (lower is better)
Translates to: AIASLSSTVLGIPRKRSEGTCLS*PRRPCH
Trigger: GTGGCAGGGCCTACGGGGCCAAGACAGACACGTTCC...CTCACTTCTCTTCCTTGGGATCCCTAAGACCGTGGAGGAGAGAGAGGCAATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CCA 90 bp TGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCACGGTCTTAGGGGGAACGTGTCTGTCTTaGCCCCGTAGGCCCTGCCAC +
Preference number: 4 (lower is better)
Translates to: WSLVCEGAIASLSSTVLGGTCLS*PRRPCH
Trigger: GTGGCAGGGCCTACGGGGCCAAGACAGACACGTTCC...CCCTAAGACCGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CCA 90 bp CTCTCCTCCACGGTCTTAGGGATCCCAAGGAAGAGAAGTGAGTGTGCGACCGAGGCCAGCACCGTCCCGTaGTCACAGAAGCAGATGACC +
Preference number: 4 (lower is better)
Translates to: LSSTVLGIPRKRSECATEASTVP*SQKQMT
Trigger: GGTCATCTGCTTCTGTGACCACGGGACGGTGCTGGC...CTCGGTCGCACACTCACTTCTCTTCCTTGGGATCCCTAAGACCGTGGAGGAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
CDS-3UTR CCA 90 bp GCCATTGCCTCTCTCTCCTCCACGGTCTTAGGGATCCCAAGGAAGAGAAGTGAGGAGGATCAGCGAGAGTaGCAGGTGTGGCTCCGGGGT +
Preference number: 4 (lower is better)
Translates to: AIASLSSTVLGIPRKRSEEDQRE*QVWLRG
Trigger: ACCCCGGAGCCACACCTGCCACTCTCGCTGATCCTC...CTCACTTCTCTTCCTTGGGATCCCTAAGACCGTGGAGGAGAGAGAGGCAATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
CDS-3UTR CCA 90 bp TGCAGCTGTGGGTTTCTTTGCAGCCTTGCCAGAGGAGGTGGTAGGCAGAGGTGGGCAGCTCCATCTGCATaGCTTGCAGCTCCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: CSCGFLCSLARGGGRQRWAAPSA*LAAPGA
Trigger: AGCACCAGGAGCTGCAAGCCATGCAGATGGAGCTGC...CCACCTCTGCCTACCACCTCCTCTGGCAAGGCTGCAAAGAAACCCACAGCTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431873.6
CDS-3UTR CCA 90 bp TGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCACGGTCTTAGGGTCCCCAAAGGCGCCATaGCCCAGACCCCGAATGAGG +
Preference number: 4 (lower is better)
Translates to: WSLVCEGAIASLSSTVLGSPKAP*PRPRMR
Trigger: CCTCATTCGGGGTCTGGGCCATGGCGCCTTTGGGGA...CCCTAAGACCGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp CGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCACGGGGGGCTTGGGTCGTTaGGCATTCCGGACACCTGGC +
Preference number: 4 (lower is better)
Translates to: RDIWSLVCEGAIASLSSTGGLGR*AFRTPG
Trigger: GCCAGGTGTCCGGAATGCCCAACGACCCAAGCCCCC...CGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp CGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCACGGCAGAAGGTCCAGCATaGCCAGGGAGGAGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: RDIWSLVCEGAIASLSSTAEGPA*PGRRAG
Trigger: GCCAGCCCTCCTCCCTGGCCATGCTGGACCTTCTGC...CGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR TCA 90 bp AAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCCCCGGCGGCAGCAGCTaGGGGCGTTCAGGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: KTKRDIWSLVCEGAIASLPGGSS*GRSGQG
Trigger: CCCCTGCCCTGAACGCCCTCAGCTGCTGCCGCCGGG...GAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS-3UTR TCA 90 bp CTCTCCTCCACGGTCTTAGGGATCCCAAGGAAGAGAAGTGAGTGTGCGACCGAGGGACTGTCTGCCTGCTaGACTTCTGGGCGTGAATCC +
Preference number: 4 (lower is better)
Translates to: LSSTVLGIPRKRSECATEGLSAC*TSGRES
Trigger: GGATTCACGCCCAGAAGTTCAGCAGGCAGACAGTCC...CTCGGTCGCACACTCACTTCTCTTCCTTGGGATCCCTAAGACCGTGGAGGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS-3UTR TCA 90 bp TGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCACGGTCTTAGGGACCAGCTCTGGTTCCTaGGGTCATGCAGTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: WSLVCEGAIASLSSTVLGTSSGS*GHAVEG
Trigger: CCCCTCCACTGCATGACCTCAGGAACCAGAGCTGGT...CCCTAAGACCGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR TCA 90 bp TGGCAGTCAGCGAAGAGGGCTCTAGGAGCAGTGAGGCCCCCGGAAGTCTCCCAGTTTTCCTCCAAATACTaGCAGCCACAGGCAATGTCC +
Preference number: 4 (lower is better)
Translates to: WQSAKRALGAVRPPEVSQFSSKY*QPQAMS
Trigger: GGACATTGCCTGTGGCTGTCAGTATTTGGAGGAAAA...CTGGGAGACTTCCGGGGGCCTCACTGCTCCTAGAGCCCTCTTCGCTGACTGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000431873.6
CDS-3UTR TCA 90 bp CTCTCCTCCACGGTCTTAGGGATCCCAAGGAAGAGAAGTGAGTGTGCGACCGAGTCGGCAAAGCGGTGTTaGTTACATCCGGGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: LSSTVLGIPRKRSECATESAKRC*LHPGPG
Trigger: CCCAGGACCCGGATGTAATCAACACCGCTTTGCCGA...CTCGGTCGCACACTCACTTCTCTTCCTTGGGATCCCTAAGACCGTGGAGGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR GCA 90 bp CAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTAGCTGCTACCACCGCTaGCGCCCCCAGAGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: QNVTFGLWFVKEPLPLSPSCYHR*RPQSRW
Trigger: CCAGCGGCTCTGGGGGCGGCAGCGGTGGTAGCAGCT...AGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS-3UTR GCA 90 bp CAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTGCGGGAGGTACCAGCTaGTACCACCGCTGCCGCCCC +
Preference number: 4 (lower is better)
Translates to: QNVTFGLWFVKEPLPLSPAGGTS*YHRCRP
Trigger: GGGGCGGCAGCGGTGGTAGCAGCTGGTACCTCCCGC...AGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS-3UTR GCA 90 bp TGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCACGGTCTTAGGGCGCGCTGCGCAAGTTTaGAGCGTCCTTGCTCTCACC +
Preference number: 4 (lower is better)
Translates to: WSLVCEGAIASLSSTVLGRAAQV*SVLALT
Trigger: GGTGAGAGCAAGGACGCTGCAAACTTGCGCAGCGCG...CCCTAAGACCGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS-3UTR GCA 90 bp CAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTGCGGCTCCCAGCTGCTaGACGCTGTCCTGGCCGCCT +
Preference number: 4 (lower is better)
Translates to: QNVTFGLWFVKEPLPLSPAAPSC*TLSWPP
Trigger: AGGCGGCCAGGACAGCGTGCAGCAGCTGGGAGCCGC...AGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS-3UTR GCA 90 bp CTCTCCTCCACGGTCTTAGGGATCCCAAGGAAGAGAAGTGAGTGTGCGACCGAGTTGCTTTCCCCCAACTaGACGGAGGCGAGCAGGAGT +
Preference number: 4 (lower is better)
Translates to: LSSTVLGIPRKRSECATELLSPN*TEASRS
Trigger: ACTCCTGCTCGCCTCCGTGCAGTTGGGGGAAAGCAA...CTCGGTCGCACACTCACTTCTCTTCCTTGGGATCCCTAAGACCGTGGAGGAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS-3UTR GCA 90 bp GCCATTGCCTCTCTCTCCTCCACGGTCTTAGGGATCCCAAGGAAGAGAAGTGAGTACCTTCCAGAGGGCTaGAGGTGCCTGTGCACCGAG +
Preference number: 4 (lower is better)
Translates to: AIASLSSTVLGIPRKRSEYLPEG*RCLCTE
Trigger: CTCGGTGCACAGGCACCTGCAGCCCTCTGGAAGGTA...CTCACTTCTCTTCCTTGGGATCCCTAAGACCGTGGAGGAGAGAGAGGCAATGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR GCA 90 bp TGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCACGGTCTTAGGGCCTTCCAGATCTGGATaGCTTTCAGGGGGCCCTCGC +
Preference number: 4 (lower is better)
Translates to: WSLVCEGAIASLSSTVLGPSRSG*LSGGPR
Trigger: GCGAGGGCCCCCTGAAAGGCATCCAGATCTGGAAGG...CCCTAAGACCGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR GCA 90 bp CTCTCCTCCACGGTCTTAGGGATCCCAAGGAAGAGAAGTGAGTGTGCGACCGAGTCGAGGTGCGGAGCTTaGTCAGCTTGTACTCAGGGC +
Preference number: 4 (lower is better)
Translates to: LSSTVLGIPRKRSECATESRCGA*SACTQG
Trigger: GCCCTGAGTACAAGCTGAGCAAGCTCCGCACCTCGA...CTCGGTCGCACACTCACTTCTCTTCCTTGGGATCCCTAAGACCGTGGAGGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR GCA 90 bp GCCATTGCCTCTCTCTCCTCCACGGTCTTAGGGATCCCAAGGAAGAGAAGTGAGAACCGGGGCAGGGATTaGAGGCTCACCCCAATGCAG +
Preference number: 4 (lower is better)
Translates to: AIASLSSTVLGIPRKRSENRGRD*RLTPMQ
Trigger: CTGCATTGGGGTGAGCCTGCAATCCCTGCCCCGGTT...CTCACTTCTCTTCCTTGGGATCCCTAAGACCGTGGAGGAGAGAGAGGCAATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp TGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCACGGTCTTAGGGAAGGGAGGTGGCAGTTaGGTACCGTCCTCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: WSLVCEGAIASLSSTVLGKGGGS*VPSSPA
Trigger: GGCAGGAGAGGACGGTACCCAACTGCCACCTCCCTT...CCCTAAGACCGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS-3UTR CCA 90 bp CTCTCCTCCACGGTCTTAGGGATCCCAAGGAAGAGAAGTGAGTGTGCGACCGAGCGCCCGATTCTTCCCTaGAGCACTGTCCAACCATGC +
Preference number: 4 (lower is better)
Translates to: LSSTVLGIPRKRSECATERPILP*STVQPC
Trigger: GCATGGTTGGACAGTGCTCCAGGGAAGAATCGGGCG...CTCGGTCGCACACTCACTTCTCTTCCTTGGGATCCCTAAGACCGTGGAGGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CCA 90 bp TGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCACGGTCTTAGGGGGCACCTTCCAGATCTaGATGCCTTTCAGGGGGCCC +
Preference number: 4 (lower is better)
Translates to: WSLVCEGAIASLSSTVLGGTFQI*MPFRGP
Trigger: GGGCCCCCTGAAAGGCATCCAGATCTGGAAGGTGCC...CCCTAAGACCGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CCA 90 bp ACTGAGTCATTATCCGGTATACAGGCCCAGGGCAGTTCTTGGGTGGGTCCATCCGGTGTGGCTCCGGGGTaGGTGACACAATGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: TESLSGIQAQGSSWVGPSGVAPG*VTQCRR
Trigger: TCTCCTGCATTGTGTCACCCACCCCGGAGCCACACC...GGATGGACCCACCCAAGAACTGCCCTGGGCCTGTATACCGGATAATGACTCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431873.6
CDS-3UTR CCA 90 bp GCCATTGCCTCTCTCTCCTCCACGGTCTTAGGGATCCCAAGGAAGAGAAGTGAGAGGGCAGTTCTTGGGTaGGTCCATCCGGCCTCCACT +
Preference number: 4 (lower is better)
Translates to: AIASLSSTVLGIPRKRSERAVLG*VHPAST
Trigger: AGTGGAGGCCGGATGGACCCACCCAAGAACTGCCCT...CTCACTTCTCTTCCTTGGGATCCCTAAGACCGTGGAGGAGAGAGAGGCAATGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp AGCTCCAGCAGGATGAACCGGGGCAGGGATTGCAGGCTCACCCCAATGCAGCGAAGATCTCTGCAGCTGTaGGTTTCTTTGCAGCCTTGC +
Preference number: 4 (lower is better)
Translates to: SSSRMNRGRDCRLTPMQRRSLQL*VSLQPC
Trigger: GCAAGGCTGCAAAGAAACCCACAGCTGCAGAGATCT...TCGCTGCATTGGGGTGAGCCTGCAATCCCTGCCCCGGTTCATCCTGCTGGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431873.6
CDS-3UTR CCA 90 bp TTCACGTGTCCCCCTTCCACGGCCGGCCCTCTAGGGACTCGAACAGAGATCTCTTGGTGGGCTTGTTTCTaGATCCGTGGACCTTGTGCA +
Preference number: 4 (lower is better)
Translates to: FTCPPSTAGPLGTRTEISWWACF*IRGPCA
Trigger: TGCACAAGGTCCACGGATCCAGAAACAAGCCCACCA...AGAGATCTCTGTTCGAGTCCCTAGAGGGCCGGCCGTGGAAGGGGGACACGTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431873.6
CDS-3UTR CCA 90 bp GCCATTGCCTCTCTCTCCTCCACGGTCTTAGGGATCCCAAGGAAGAGAAGTGAGCCAGGAGCCGTACGTTaGGTTCCACAAGCTGGTGGG +
Preference number: 4 (lower is better)
Translates to: AIASLSSTVLGIPRKRSEPGAVR*VPQAGG
Trigger: CCCACCAGCTTGTGGAACCCAACGTACGGCTCCTGG...CTCACTTCTCTTCCTTGGGATCCCTAAGACCGTGGAGGAGAGAGAGGCAATGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp GTTTTTCCGCGGCACCTCCTTCAGGTCACTGATGGAGGAGGTCTTGCCAGCAAACCAGGAGCCGTACGTTaGGTTCCACAAGCTGGTGGG +
Preference number: 4 (lower is better)
Translates to: VFPRHLLQVTDGGGLASKPGAVR*VPQAGG
Trigger: CCCACCAGCTTGTGGAACCCAACGTACGGCTCCTGG...TTTGCTGGCAAGACCTCCTCCATCAGTGACCTGAAGGAGGTGCCGCGGAAAAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431873.6
CDS-3UTR CCA 90 bp ACTGAGTCATTATCCGGTATACAGGCCCAGGGCAGTTCTTGGGTGGGTCCATCCATGGCTTGCAGCTCCTaGTGCTTCCGGCGGTACACC +
Preference number: 4 (lower is better)
Translates to: TESLSGIQAQGSSWVGPSMACSS*CFRRYT
Trigger: GGTGTACCGCCGGAAGCACCAGGAGCTGCAAGCCAT...GGATGGACCCACCCAAGAACTGCCCTGGGCCTGTATACCGGATAATGACTCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431873.6
CDS-3UTR TCA 90 bp TGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCACGGTCTTAGGGGGTTGTAGTCGGTCATaGTGGTCGAGGTGCGGAGCT +
Preference number: 4 (lower is better)
Translates to: WSLVCEGAIASLSSTVLGGCSRS*WSRCGA
Trigger: AGCTCCGCACCTCGACCATCATGACCGACTACAACC...CCCTAAGACCGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR TCA 90 bp ACTGAGTCATTATCCGGTATACAGGCCCAGGGCAGTTCTTGGGTGGGTCCATCCCCTCCTTCAGGTCACTaGTGGAGGAGGTCTTGCCAG +
Preference number: 4 (lower is better)
Translates to: TESLSGIQAQGSSWVGPSPPSGH*WRRSCQ
Trigger: CTGGCAAGACCTCCTCCATCAGTGACCTGAAGGAGG...GGATGGACCCACCCAAGAACTGCCCTGGGCCTGTATACCGGATAATGACTCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431873.6
CDS-3UTR TCA 90 bp TTCATATTGGCAGTCAGCGAAGAGGGCTCTAGGAGCAGTGAGGCCCCCGGAAGTTCCGGCCTCCACTGGTaGCAAACTCCAGAACTTCCT +
Preference number: 4 (lower is better)
Translates to: FILAVSEEGSRSSEAPGSSGLHW*QTPELP
Trigger: AGGAAGTTCTGGAGTTTGTCACCAGTGGAGGCCGGA...ACTTCCGGGGGCCTCACTGCTCCTAGAGCCCTCTTCGCTGACTGCCAATATGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431873.6
CDS-3UTR TCA 90 bp GCCATTGCCTCTCTCTCCTCCACGGTCTTAGGGATCCCAAGGAAGAGAAGTGAGCCCAAGGAAGAGAAGTaGGTGTGCGACCGAGCTCAG +
Preference number: 4 (lower is better)
Translates to: AIASLSSTVLGIPRKRSEPKEEK*VCDRAQ
Trigger: CTGAGCTCGGTCGCACACTCACTTCTCTTCCTTGGG...CTCACTTCTCTTCCTTGGGATCCCTAAGACCGTGGAGGAGAGAGAGGCAATGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR GCA 90 bp ACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTGGCACGCCGGAGCTTaGGCACGGAGCCGCCCTTCA +
Preference number: 4 (lower is better)
Translates to: TKRDIWSLVCEGAIASLSWHAGA*ARSRPS
Trigger: TGAAGGGCGGCTCCGTGCGCAAGCTCCGGCGTGCCA...GGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS-3UTR GCA 90 bp TGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCACGGTCTTAGGGCTCCTTAGAACGCTCTaGCCCAGGCCCATCCAGCAA +
Preference number: 4 (lower is better)
Translates to: WSLVCEGAIASLSSTVLGLLRTL*PRPIQQ
Trigger: TTGCTGGATGGGCCTGGGGCAGAGCGTTCTAAGGAG...CCCTAAGACCGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR GCA 90 bp CTCTCCTCCACGGTCTTAGGGATCCCAAGGAAGAGAAGTGAGTGTGCGACCGAGGGACTCAGGATGGTGTaGTTGGAGTCAGCTGAGGTG +
Preference number: 4 (lower is better)
Translates to: LSSTVLGIPRKRSECATEGLRMV*LESAEV
Trigger: CACCTCAGCTGACTCCAAGCACACCATCCTGAGTCC...CTCGGTCGCACACTCACTTCTCTTCCTTGGGATCCCTAAGACCGTGGAGGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR GCA 90 bp GCCATTGCCTCTCTCTCCTCCACGGTCTTAGGGATCCCAAGGAAGAGAAGTGAGGTGTGCAGTGCTCACTaGTGCTCCTCATCCACGGAC +
Preference number: 4 (lower is better)
Translates to: AIASLSSTVLGIPRKRSEVCSAH*CSSSTD
Trigger: GTCCGTGGATGAGGAGCAGCAGTGAGCACTGCACAC...CTCACTTCTCTTCCTTGGGATCCCTAAGACCGTGGAGGAGAGAGAGGCAATGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR GCA 90 bp GCCATTGCCTCTCTCTCCTCCACGGTCTTAGGGATCCCAAGGAAGAGAAGTGAGACGGCCAGTGTGCAGTaGTCACTGCTGCTCCTCATC +
Preference number: 4 (lower is better)
Translates to: AIASLSSTVLGIPRKRSETASVQ*SLLLLI
Trigger: GATGAGGAGCAGCAGTGAGCACTGCACACTGGCCGT...CTCACTTCTCTTCCTTGGGATCCCTAAGACCGTGGAGGAGAGAGAGGCAATGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR GCA 90 bp GCCATTGCCTCTCTCTCCTCCACGGTCTTAGGGATCCCAAGGAAGAGAAGTGAGCAGGAGGATCTCTCTTaGAGCCTCGTTGTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: AIASLSSTVLGIPRKRSEQEDLS*SLVVGQ
Trigger: CTGCCCCACAACGAGGCTGCAAGAGAGATCCTCCTG...CTCACTTCTCTTCCTTGGGATCCCTAAGACCGTGGAGGAGAGAGAGGCAATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR GCA 90 bp CTCTCCTCCACGGTCTTAGGGATCCCAAGGAAGAGAAGTGAGTGTGCGACCGAGTCCTTGTCCCCACCATaGGACCATCTGCAGCCAGAA +
Preference number: 4 (lower is better)
Translates to: LSSTVLGIPRKRSECATESLSPP*DHLQPE
Trigger: TTCTGGCTGCAGATGGTCGCATGGTGGGGACAAGGA...CTCGGTCGCACACTCACTTCTCTTCCTTGGGATCCCTAAGACCGTGGAGGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR GCA 90 bp CGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCACGCCGGTGGCACCCTCCTaGAAAGATTTTCCGGCCCAG +
Preference number: 4 (lower is better)
Translates to: RDIWSLVCEGAIASLSSTPVAPS*KDFPAQ
Trigger: CTGGGCCGGAAAATCTTTGCAGGAGGGTGCCACCGG...CGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR GCA 90 bp GCCATTGCCTCTCTCTCCTCCACGGTCTTAGGGATCCCAAGGAAGAGAAGTGAGTCCATCTGCATGGCTTaGAGCTCCTGGTGCTTCCGG +
Preference number: 4 (lower is better)
Translates to: AIASLSSTVLGIPRKRSESICMA*SSWCFR
Trigger: CCGGAAGCACCAGGAGCTGCAAGCCATGCAGATGGA...CTCACTTCTCTTCCTTGGGATCCCTAAGACCGTGGAGGAGAGAGAGGCAATGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR GCA 90 bp GCCATTGCCTCTCTCTCCTCCACGGTCTTAGGGATCCCAAGGAAGAGAAGTGAGTCGAGGTGCGGAGCTTaGTCAGCTTGTACTCAGGGC +
Preference number: 4 (lower is better)
Translates to: AIASLSSTVLGIPRKRSESRCGA*SACTQG
Trigger: GCCCTGAGTACAAGCTGAGCAAGCTCCGCACCTCGA...CTCACTTCTCTTCCTTGGGATCCCTAAGACCGTGGAGGAGAGAGAGGCAATGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR GCA 90 bp CTCTCCTCCACGGTCTTAGGGATCCCAAGGAAGAGAAGTGAGTGTGCGACCGAGCTCCTCCTCCCGTTTTaGCTGTTGAGAGACCAGGAG +
Preference number: 4 (lower is better)
Translates to: LSSTVLGIPRKRSECATELLLPF*LLRDQE
Trigger: CTCCTGGTCTCTCAACAGGCAAAACGGGAGGAGGAG...CTCGGTCGCACACTCACTTCTCTTCCTTGGGATCCCTAAGACCGTGGAGGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp ACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCCAGCGCCCGCGGCTTTaGGTGGCCGACCAGAGGGCG +
Preference number: 4 (lower is better)
Translates to: TKQNVTFGLWFVKEPLPLQRPRL*VADQRA
Trigger: CGCCCTCTGGTCGGCCACCCAAAGCCGCGGGCGCTG...GAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS-3UTR CCA 90 bp CTCTCCTCCACGGTCTTAGGGATCCCAAGGAAGAGAAGTGAGTGTGCGACCGAGATGGTTGAAGGGAGGTaGCAGTTGGGTACCGTCCTC +
Preference number: 4 (lower is better)
Translates to: LSSTVLGIPRKRSECATEMVEGR*QLGTVL
Trigger: GAGGACGGTACCCAACTGCCACCTCCCTTCAACCAT...CTCGGTCGCACACTCACTTCTCTTCCTTGGGATCCCTAAGACCGTGGAGGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS-3UTR CCA 90 bp TGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCACGGTCTTAGGGGCTCTGAACAGTCCTTaGTACCCAGCGGCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: WSLVCEGAIASLSSTVLGALNSP*YPAAPS
Trigger: GGAAGGAGCCGCTGGGTACCAAGGACTGTTCAGAGC...CCCTAAGACCGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS-3UTR CCA 90 bp CTCTCCTCCACGGTCTTAGGGATCCCAAGGAAGAGAAGTGAGTGTGCGACCGAGGGCCATCTTGGAGCCTaGGGATGTTCCTTCACTGCA +
Preference number: 4 (lower is better)
Translates to: LSSTVLGIPRKRSECATEGHLGA*GCSFTA
Trigger: TGCAGTGAAGGAACATCCCCAGGCTCCAAGATGGCC...CTCGGTCGCACACTCACTTCTCTTCCTTGGGATCCCTAAGACCGTGGAGGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CCA 90 bp CTCTCCTCCACGGTCTTAGGGATCCCAAGGAAGAGAAGTGAGTGTGCGACCGAGCTCTCATCTTCTCCCTaGGCACAGTCCTGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: LSSTVLGIPRKRSECATELSSSP*AQSWWK
Trigger: CTTCCACCAGGACTGTGCCCAGGGAGAAGATGAGAG...CTCGGTCGCACACTCACTTCTCTTCCTTGGGATCCCTAAGACCGTGGAGGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CCA 90 bp CTCTCCTCCACGGTCTTAGGGATCCCAAGGAAGAGAAGTGAGTGTGCGACCGAGTGCTGTAGGTGTCGGTaGCTGGCACCTTCCAGATCT +
Preference number: 4 (lower is better)
Translates to: LSSTVLGIPRKRSECATECCRCR*LAPSRS
Trigger: AGATCTGGAAGGTGCCAGCCACCGACACCTACAGCA...CTCGGTCGCACACTCACTTCTCTTCCTTGGGATCCCTAAGACCGTGGAGGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CCA 90 bp CGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCACGGCCAGCACCGTCCCGTaGTCACAGAAGCAGATGACC +
Preference number: 4 (lower is better)
Translates to: RDIWSLVCEGAIASLSSTASTVP*SQKQMT
Trigger: GGTCATCTGCTTCTGTGACCACGGGACGGTGCTGGC...CGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
CDS-3UTR CCA 90 bp TGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCACGGTCTTAGGGGCAGCTCCATCTGCATaGCTTGCAGCTCCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: WSLVCEGAIASLSSTVLGAAPSA*LAAPGA
Trigger: AGCACCAGGAGCTGCAAGCCATGCAGATGGAGCTGC...CCCTAAGACCGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp TGGCAGTCAGCGAAGAGGGCTCTAGGAGCAGTGAGGCCCCCGGAAGTCTCCCAGGTGACATTTGGTCTCTaGTTTGTGAAGGAGCCATTG +
Preference number: 4 (lower is better)
Translates to: WQSAKRALGAVRPPEVSQVTFGL*FVKEPL
Trigger: CAATGGCTCCTTCACAAACCAGAGACCAAATGTCAC...CTGGGAGACTTCCGGGGGCCTCACTGCTCCTAGAGCCCTCTTCGCTGACTGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431873.6
CDS-3UTR CCA 90 bp GCCATTGCCTCTCTCTCCTCCACGGTCTTAGGGATCCCAAGGAAGAGAAGTGAGATGGCTTGCAGCTCCTaGTGCTTCCGGCGGTACACT +
Preference number: 4 (lower is better)
Translates to: AIASLSSTVLGIPRKRSEMACSS*CFRRYT
Trigger: AGTGTACCGCCGGAAGCACCAGGAGCTGCAAGCCAT...CTCACTTCTCTTCCTTGGGATCCCTAAGACCGTGGAGGAGAGAGAGGCAATGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642122.1
3UTR CAA 72 bp CAGGAGCCGTACGTTGGGTTCCACAAGCTGGTGGGCTaGTTTCTGGATCCGTGGACCTTGTGCAACTCCGAA +
Preference number: 4 (lower is better)
Translates to: QEPYVGFHKLVG*FLDPWTLCNSE
Trigger: TTCGGAGTTGCACAAGGTCCACGGATCCAGAAACAAGCCCACCAGCTTGTGGAACCCAACGTACGGCTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431873.6
CDS-3UTR TCA 90 bp AAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCCACTGGCTGGGACCTTaGGCCTCCCGCTCTCCGCGC +
Preference number: 4 (lower is better)
Translates to: KTKRDIWSLVCEGAIASLHWLGP*ASRSPR
Trigger: GCGCGGAGAGCGGGAGGCTCAAGGTCCCAGCCAGTG...GAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS-3UTR TCA 90 bp AAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCGCAGGCGCGAGTAGCTaGGTGGCTCCCGGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: KTKRDIWSLVCEGAIASLAGASS*VAPGAA
Trigger: TGCAGCCCCGGGAGCCACTCAGCTACTCGCGCCTGC...GAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS-3UTR TCA 90 bp CGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCACGTTGAGGAGTGTGGGGTaGCAGTGTGCCTTGGGTCCA +
Preference number: 4 (lower is better)
Translates to: RDIWSLVCEGAIASLSSTLRSVG*QCALGP
Trigger: TGGACCCAAGGCACACTGTCACCCCACACTCCTCAA...CGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR TCA 90 bp CAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCACCTCCGGCTGCAATaGTCAGGGGCACCGGCACTC +
Preference number: 4 (lower is better)
Translates to: QNVTFGLWFVKEPLPLSPHLRLQ*SGAPAL
Trigger: GAGTGCCGGTGCCCCTGATCATTGCAGCCGGAGGTG...AGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR TCA 90 bp ACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCCACCTCCGGCTGCAATaGTCAGGGGCACCGGCACTC +
Preference number: 4 (lower is better)
Translates to: TKRDIWSLVCEGAIASLSHLRLQ*SGAPAL
Trigger: GAGTGCCGGTGCCCCTGATCATTGCAGCCGGAGGTG...GGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR TCA 90 bp CGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCACGGGTTGTAGTCGGTCATaGTGGTCGAGGTGCGGAGCT +
Preference number: 4 (lower is better)
Translates to: RDIWSLVCEGAIASLSSTGCSRS*WSRCGA
Trigger: AGCTCCGCACCTCGACCATCATGACCGACTACAACC...CGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR TCA 90 bp TGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCACGGTCTTAGGGTCCCGTTTTGCCTGTTaGGAGACCAGGAGAGGAGGA +
Preference number: 4 (lower is better)
Translates to: WSLVCEGAIASLSSTVLGSRFAC*ETRRGG
Trigger: TCCTCCTCTCCTGGTCTCTCAACAGGCAAAACGGGA...CCCTAAGACCGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR TCA 90 bp CTCTCCTCCACGGTCTTAGGGATCCCAAGGAAGAGAAGTGAGTGTGCGACCGAGGGAAGTGACGTAGCCTaGACAGAGGTACCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: LSSTVLGIPRKRSECATEGSDVA*TEVPPS
Trigger: TGAAGGAGGTACCTCTGTTCAGGCTACGTCACTTCC...CTCGGTCGCACACTCACTTCTCTTCCTTGGGATCCCTAAGACCGTGGAGGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR GCA 90 bp TGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCACGGTCTTAGGGCCAGAGGACTGTGCGTaGGCGCAAGTCTCTTGCTTT +
Preference number: 4 (lower is better)
Translates to: WSLVCEGAIASLSSTVLGPEDCA*AQVSCF
Trigger: AAAGCAAGAGACTTGCGCGCACGCACAGTCCTCTGG...CCCTAAGACCGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS-3UTR GCA 90 bp CGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCACGCTCCTTAGAACGCTCTaGCCCAGGCCCATCCAGCAA +
Preference number: 4 (lower is better)
Translates to: RDIWSLVCEGAIASLSSTLLRTL*PRPIQQ
Trigger: TTGCTGGATGGGCCTGGGGCAGAGCGTTCTAAGGAG...CGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR GCA 90 bp GCCATTGCCTCTCTCTCCTCCACGGTCTTAGGGATCCCAAGGAAGAGAAGTGAGGGACTCAGGATGGTGTaGTTGGAGTCAGCTGAGGTG +
Preference number: 4 (lower is better)
Translates to: AIASLSSTVLGIPRKRSEGLRMV*LESAEV
Trigger: CACCTCAGCTGACTCCAAGCACACCATCCTGAGTCC...CTCACTTCTCTTCCTTGGGATCCCTAAGACCGTGGAGGAGAGAGAGGCAATGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR GCA 90 bp CGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCACGTGGAAGTCACAGGCCTaGCCAAGCTGGAGGACTGTC +
Preference number: 4 (lower is better)
Translates to: RDIWSLVCEGAIASLSSTWKSQA*PSWRTV
Trigger: GACAGTCCTCCAGCTTGGGCAGGCCTGTGACTTCCA...CGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR GCA 90 bp GCCATTGCCTCTCTCTCCTCCACGGTCTTAGGGATCCCAAGGAAGAGAAGTGAGCATGCCAGACCATCCTaGCTTGCTCCTTCCCGGTTT +
Preference number: 4 (lower is better)
Translates to: AIASLSSTVLGIPRKRSEHARPS*LAPSRF
Trigger: AAACCGGGAAGGAGCAAGGCAGGATGGTCTGGCATG...CTCACTTCTCTTCCTTGGGATCCCTAAGACCGTGGAGGAGAGAGAGGCAATGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR GCA 90 bp TGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCACGGTCTTAGGGCACCATGCGACCATCTaGAGCCAGAACCTGTCAGAC +
Preference number: 4 (lower is better)
Translates to: WSLVCEGAIASLSSTVLGHHATI*SQNLSD
Trigger: GTCTGACAGGTTCTGGCTGCAGATGGTCGCATGGTG...CCCTAAGACCGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR GCA 90 bp CGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCACGCTGCGGCTCCGGAATTaGCGTTTAGCCCTAGAACCG +
Preference number: 4 (lower is better)
Translates to: RDIWSLVCEGAIASLSSTLRLRN*RLALEP
Trigger: CGGTTCTAGGGCTAAACGGCAATTCCGGAGCCGCAG...CGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR GCA 90 bp CGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCACGGGGTGGGTGACACAATaGAGGAGACGCCATCCTCAG +
Preference number: 4 (lower is better)
Translates to: RDIWSLVCEGAIASLSSTGWVTQ*RRRHPQ
Trigger: CTGAGGATGGCGTCTCCTGCATTGTGTCACCCACCC...CGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
CDS-3UTR CCA 90 bp TGGCACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCCTCTTCTGCCCGGTCTaGGCGGGAACCGAGGGCGGA +
Preference number: 4 (lower is better)
Translates to: WHKTKRDIWSLVCEGAIALFCPV*AGTEGG
Trigger: TCCGCCCTCGGTTCCCGCCCAGACCGGGCAGAAGAG...GGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS-3UTR CCA 90 bp ACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCCCCCGCAGTCGGAGCTaGGGTCTGTCCCCTCTCGGG +
Preference number: 4 (lower is better)
Translates to: TKQNVTFGLWFVKEPLPLPRSRS*GLSPLG
Trigger: CCCGAGAGGGGACAGACCCCAGCTCCGACTGCGGGG...GAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS-3UTR CCA 90 bp TGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCACGGTCTTAGGGAGTCGCCCTTCGCCTTaGCGAATCCACCAACTGAAC +
Preference number: 4 (lower is better)
Translates to: WSLVCEGAIASLSSTVLGSRPSP*RIHQLN
Trigger: GTTCAGTTGGTGGATTCGCCAAGGCGAAGGGCGACT...CCCTAAGACCGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS-3UTR CCA 90 bp GCCATTGCCTCTCTCTCCTCCACGGTCTTAGGGATCCCAAGGAAGAGAAGTGAGTCCACGGACTCAGGATaGTGTGCTTGGAGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: AIASLSSTVLGIPRKRSESTDSG*CAWSQL
Trigger: CAGCTGACTCCAAGCACACCATCCTGAGTCCGTGGA...CTCACTTCTCTTCCTTGGGATCCCTAAGACCGTGGAGGAGAGAGAGGCAATGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CCA 90 bp ACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTTGTTGCACTGTGCCTaGGTGGGGCCATGGGGCCCG +
Preference number: 4 (lower is better)
Translates to: TKRDIWSLVCEGAIASLSLLHCA*VGPWGP
Trigger: CGGGCCCCATGGCCCCACCCAGGCACAGTGCAACAA...GGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CCA 90 bp CAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTTTGTTGCACTGTGCCTaGGTGGGGCCATGGGGCCCG +
Preference number: 4 (lower is better)
Translates to: QNVTFGLWFVKEPLPLSPLLHCA*VGPWGP
Trigger: CGGGCCCCATGGCCCCACCCAGGCACAGTGCAACAA...AGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CCA 90 bp TGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCACGGTCTTAGGGCCTCCACGCTCAGGTTaGAGTTCTGGTAGGCGTTGT +
Preference number: 4 (lower is better)
Translates to: WSLVCEGAIASLSSTVLGPPRSG*SSGRRC
Trigger: ACAACGCCTACCAGAACTCCAACCTGAGCGTGGAGG...CCCTAAGACCGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CCA 90 bp CTCTCCTCCACGGTCTTAGGGATCCCAAGGAAGAGAAGTGAGTGTGCGACCGAGGTACAGGATGCCCAGTaGACTGATGAAGGAAACCCC +
Preference number: 4 (lower is better)
Translates to: LSSTVLGIPRKRSECATEVQDAQ*TDEGNP
Trigger: GGGGTTTCCTTCATCAGTCCACTGGGCATCCTGTAC...CTCGGTCGCACACTCACTTCTCTTCCTTGGGATCCCTAAGACCGTGGAGGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
CDS-3UTR CCA 90 bp CGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCACGATGGCTTGCAGCTCCTaGTGCTTCCGGCGGTACACA +
Preference number: 4 (lower is better)
Translates to: RDIWSLVCEGAIASLSSTMACSS*CFRRYT
Trigger: TGTGTACCGCCGGAAGCACCAGGAGCTGCAAGCCAT...CGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CCA 90 bp GTTTTTCCGCGGCACCTCCTTCAGGTCACTGATGGAGGAGGTCTTGCCAGCAAACACTCTTCCAGGGCCTaGACAGGTCAAGAGGCAGTT +
Preference number: 4 (lower is better)
Translates to: VFPRHLLQVTDGGGLASKHSSRA*TGQEAV
Trigger: AACTGCCTCTTGACCTGTCCAGGCCCTGGAAGAGTG...TTTGCTGGCAAGACCTCCTCCATCAGTGACCTGAAGGAGGTGCCGCGGAAAAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431873.6
CDS-3UTR CCA 90 bp CGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCACGGGGCATCCACTTAACTaGCAGCATGGCACAGCCTCC +
Preference number: 4 (lower is better)
Translates to: RDIWSLVCEGAIASLSSTGHPLN*QHGTAS
Trigger: GGAGGCTGTGCCATGCTGCCAGTTAAGTGGATGCCC...CGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp AAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCAGGTGGTGGGGCAGCTaGGCTGCGCTCCTCCTCCCG +
Preference number: 4 (lower is better)
Translates to: KTKRDIWSLVCEGAIASLRWWGS*AALLLP
Trigger: CGGGAGGAGGAGCGCAGCCCAGCTGCCCCACCACCT...GAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp CTCTCCTCCACGGTCTTAGGGATCCCAAGGAAGAGAAGTGAGTGTGCGACCGAGTGGTGGGCTTGTTTCTaGATCCGTGGACCTTGTGCA +
Preference number: 4 (lower is better)
Translates to: LSSTVLGIPRKRSECATEWWACF*IRGPCA
Trigger: TGCACAAGGTCCACGGATCCAGAAACAAGCCCACCA...CTCGGTCGCACACTCACTTCTCTTCCTTGGGATCCCTAAGACCGTGGAGGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp CGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCACGCATGGCCTGGCAGCCTaGCCCTTGAAGCACTACACA +
Preference number: 4 (lower is better)
Translates to: RDIWSLVCEGAIASLSSTHGLAA*PLKHYT
Trigger: TGTGTAGTGCTTCAAGGGCCAGGCTGCCAGGCCATG...CGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642122.1
CDS-3UTR TCA 90 bp CTCTCCTCCACGGTCTTAGGGATCCCAAGGAAGAGAAGTGAGTGTGCGACCGAGCTTTCAGGGTCCATGTaGCATTCGTCTACCTCACAG +
Preference number: 4 (lower is better)
Translates to: LSSTVLGIPRKRSECATELSGSM*HSSTSQ
Trigger: CTGTGAGGTAGACGAATGTCACATGGACCCTGAAAG...CTCGGTCGCACACTCACTTCTCTTCCTTGGGATCCCTAAGACCGTGGAGGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
CDS-3UTR TCA 90 bp TGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCACGGTCTTAGGGGGAAGTGACGTAGCCTaGACAGAGGTACCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: WSLVCEGAIASLSSTVLGGSDVA*TEVPPS
Trigger: TGAAGGAGGTACCTCTGTTCAGGCTACGTCACTTCC...CCCTAAGACCGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR TCA 90 bp TGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCACGGTCTTAGGGTTCCCACAAGGGAAGTaGCGTAGCCTGAACAGAGGT +
Preference number: 4 (lower is better)
Translates to: WSLVCEGAIASLSSTVLGFPQGK*RSLNRG
Trigger: ACCTCTGTTCAGGCTACGTCACTTCCCTTGTGGGAA...CCCTAAGACCGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR TCA 90 bp CTCTCCTCCACGGTCTTAGGGATCCCAAGGAAGAGAAGTGAGTGTGCGACCGAGGCTGGTAGCCGTAATTaGCATTCCCACAAGGGAAGT +
Preference number: 4 (lower is better)
Translates to: LSSTVLGIPRKRSECATEAGSRN*HSHKGS
Trigger: ACTTCCCTTGTGGGAATGTCAATTACGGCTACCAGC...CTCGGTCGCACACTCACTTCTCTTCCTTGGGATCCCTAAGACCGTGGAGGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR TCA 90 bp CCACAAGCTGGTGGGCTTGTTTCTGGATCCGTGGACCTTGTGCAACTCCGAAGGTTGGTCTCTGGTTTGTaGAGGAGCCATTGCCTCTCT +
Preference number: 4 (lower is better)
Translates to: PQAGGLVSGSVDLVQLRRLVSGL*RSHCLS
Trigger: AGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAA...CCTTCGGAGTTGCACAAGGTCCACGGATCCAGAAACAAGCCCACCAGCTTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431873.6
CDS-3UTR TCA 90 bp CTACAATGTATAAAGGCATTCTGTAAACATGGGCAGCAGGGGTCCCGGGCTGAGGAGTGGCTGGAGCTGTaGGGATGTTGCTCAGGCACT +
Preference number: 4 (lower is better)
Translates to: LQCIKAFCKHGQQGSRAEEWLEL*GCCSGT
Trigger: AGTGCCTGAGCAACATCCTCACAGCTCCAGCCACTC...CTCAGCCCGGGACCCCTGCTGCCCATGTTTACAGAATGCCTTTATACATTGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453137.1
CDS-3UTR GCA 90 bp TGGCACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCCGGAAAGCACCTCGGTaGCCCGCGACCCTCCGAACA +
Preference number: 4 (lower is better)
Translates to: WHKTKRDIWSLVCEGAIARKAPR*PATLRT
Trigger: TGTTCGGAGGGTCGCGGGGCACCGAGGTGCTTTCCG...GGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS-3UTR GCA 90 bp CAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTGGAGGCCGTTTACACTaGTCTCCGGGCCCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: QNVTFGLWFVKEPLPLSPGGRLH*SPGPAS
Trigger: TGAGGCTGGGCCCGGAGAGCAGTGTAAACGGCCTCC...AGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS-3UTR GCA 90 bp AAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCCCCGGAGCCCACAGCTaGCGTGGAAAGCAGCAGCGG +
Preference number: 4 (lower is better)
Translates to: KTKRDIWSLVCEGAIASLPGAHS*RGKQQR
Trigger: CCGCTGCTGCTTTCCACGGCAGCTGTGGGCTCCGGG...GAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS-3UTR GCA 90 bp CGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCACGTGCAGTGCTCACTGCTaGTCCTCATCCACGGACTCA +
Preference number: 4 (lower is better)
Translates to: RDIWSLVCEGAIASLSSTCSAHC*SSSTDS
Trigger: TGAGTCCGTGGATGAGGAGCAGCAGTGAGCACTGCA...CGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR GCA 90 bp CGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCACGAGCACTGTCCAACCATaGTTCCCTGGAGTGGGCATC +
Preference number: 4 (lower is better)
Translates to: RDIWSLVCEGAIASLSSTSTVQP*FPGVGI
Trigger: GATGCCCACTCCAGGGAAGCATGGTTGGACAGTGCT...CGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR GCA 90 bp GCCATTGCCTCTCTCTCCTCCACGGTCTTAGGGATCCCAAGGAAGAGAAGTGAGCAGACCATCCTGCCTTaGTCCTTCCCGGTTTTGTTC +
Preference number: 4 (lower is better)
Translates to: AIASLSSTVLGIPRKRSEQTILP*SFPVLF
Trigger: GAACAAAACCGGGAAGGAGCAAGGCAGGATGGTCTG...CTCACTTCTCTTCCTTGGGATCCCTAAGACCGTGGAGGAGAGAGAGGCAATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR GCA 90 bp CGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCACGGGCAACACCATCCACTaGCACAGGCTCAAGCCTTCA +
Preference number: 4 (lower is better)
Translates to: RDIWSLVCEGAIASLSSTGNTIH*HRLKPS
Trigger: TGAAGGCTTGAGCCTGTGGCAGTGGATGGTGTTGCC...CGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR GCA 90 bp CTCTCCTCCACGGTCTTAGGGATCCCAAGGAAGAGAAGTGAGTGTGCGACCGAGTTGGGTGCTGTATTCTaGAGGATCTTGTCCTCTCCG +
Preference number: 4 (lower is better)
Translates to: LSSTVLGIPRKRSECATELGAVF*RILSSP
Trigger: CGGAGAGGACAAGATCCTGCAGAATACAGCACCCAA...CTCGGTCGCACACTCACTTCTCTTCCTTGGGATCCCTAAGACCGTGGAGGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR GCA 90 bp CAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTGCCACCTCCACCACCTaGGGCTCCGGAATTGCCGTT +
Preference number: 4 (lower is better)
Translates to: QNVTFGLWFVKEPLPLSPATSTT*GSGIAV
Trigger: AACGGCAATTCCGGAGCCGCAGGTGGTGGAGGTGGC...AGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR GCA 90 bp GCCATTGCCTCTCTCTCCTCCACGGTCTTAGGGATCCCAAGGAAGAGAAGTGAGTTGTACTCAGGGCTCTaGAGCTCCATCTGCATGGCT +
Preference number: 4 (lower is better)
Translates to: AIASLSSTVLGIPRKRSELYSGL*SSICMA
Trigger: AGCCATGCAGATGGAGCTGCAGAGCCCTGAGTACAA...CTCACTTCTCTTCCTTGGGATCCCTAAGACCGTGGAGGAGAGAGAGGCAATGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR GCA 90 bp GCCATTGCCTCTCTCTCCTCCACGGTCTTAGGGATCCCAAGGAAGAGAAGTGAGGCAGGCTCACCCCAATaGAGCGAACAATGTTCTGGT +
Preference number: 4 (lower is better)
Translates to: AIASLSSTVLGIPRKRSEAGSPQ*SEQCSG
Trigger: ACCAGAACATTGTTCGCTGCATTGGGGTGAGCCTGC...CTCACTTCTCTTCCTTGGGATCCCTAAGACCGTGGAGGAGAGAGAGGCAATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR GCA 90 bp CGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCACGGATCCGTGGACCTTGTaGAACTCCGAAGGAGGGTTG +
Preference number: 4 (lower is better)
Translates to: RDIWSLVCEGAIASLSSTDPWTL*NSEGGL
Trigger: CAACCCTCCTTCGGAGTTGCACAAGGTCCACGGATC...CGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR GCA 90 bp AGCTCCAGCAGGATGAACCGGGGCAGGGATTGCAGGCTCACCCCAATGCAGCGATGCATAAAAACCTTATaGAACCACATCTGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: SSSRMNRGRDCRLTPMQRCIKTL*NHIWAL
Trigger: CAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCA...TCGCTGCATTGGGGTGAGCCTGCAATCCCTGCCCCGGTTCATCCTGCTGGAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000431873.6
CDS-3UTR CCA 90 bp CAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTAGCCCACAGCTGCCGTaGAAAGCAGCAGCGGCAGGA +
Preference number: 4 (lower is better)
Translates to: QNVTFGLWFVKEPLPLSPSPQLP*KAAAAG
Trigger: TCCTGCCGCTGCTGCTTTCCACGGCAGCTGTGGGCT...AGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS-3UTR CCA 90 bp ACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCCCAGCACCAACTGCTTaGCACGCCGGAGCTTGCGCA +
Preference number: 4 (lower is better)
Translates to: TKRDIWSLVCEGAIASLSPAPTA*HAGACA
Trigger: TGCGCAAGCTCCGGCGTGCCAAGCAGTTGGTGCTGG...GGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS-3UTR CCA 90 bp CGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCACGCCTGAGGTCATGCAGTaGAGGGGAATACTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: RDIWSLVCEGAIASLSSTPEVMQ*RGILQL
Trigger: GAGCTGGAGTATTCCCCTCCACTGCATGACCTCAGG...CGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CCA 90 bp GCCATTGCCTCTCTCTCCTCCACGGTCTTAGGGATCCCAAGGAAGAGAAGTGAGTCGAAATGGGTTGTCTaGACGCCCGATTCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: AIASLSSTVLGIPRKRSESKWVV*TPDSSL
Trigger: CAGGGAAGAATCGGGCGTCCAGACAACCCATTTCGA...CTCACTTCTCTTCCTTGGGATCCCTAAGACCGTGGAGGAGAGAGAGGCAATGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CCA 90 bp GCCATTGCCTCTCTCTCCTCCACGGTCTTAGGGATCCCAAGGAAGAGAAGTGAGCATTCGGAGCTCACATaGAGAGCTCTTGATCGGTGC +
Preference number: 4 (lower is better)
Translates to: AIASLSSTVLGIPRKRSEHSELT*RALDRC
Trigger: GCACCGATCAAGAGCTCTCCATGTGAGCTCCGAATG...CTCACTTCTCTTCCTTGGGATCCCTAAGACCGTGGAGGAGAGAGAGGCAATGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CCA 90 bp GCCATTGCCTCTCTCTCCTCCACGGTCTTAGGGATCCCAAGGAAGAGAAGTGAGTGTCAAAAGCCACGATaGCTCTGGATCCTTGTCCCC +
Preference number: 4 (lower is better)
Translates to: AIASLSSTVLGIPRKRSECQKPR*LWILVP
Trigger: GGGGACAAGGATCCAGAGCCATCGTGGCTTTTGACA...CTCACTTCTCTTCCTTGGGATCCCTAAGACCGTGGAGGAGAGAGAGGCAATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CCA 90 bp TGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCACGGTCTTAGGGTGTCAAAAGCCACGATaGCTCTGGATCCTTGTCCCC +
Preference number: 4 (lower is better)
Translates to: WSLVCEGAIASLSSTVLGCQKPR*LWILVP
Trigger: GGGGACAAGGATCCAGAGCCATCGTGGCTTTTGACA...CCCTAAGACCGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CCA 90 bp TGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCACGGTCTTAGGGAGGAATGTCCTCCGGTaGCACCCTCCTGCAAAGATT +
Preference number: 4 (lower is better)
Translates to: WSLVCEGAIASLSSTVLGRNVLR*HPPAKI
Trigger: AATCTTTGCAGGAGGGTGCCACCGGAGGACATTCCT...CCCTAAGACCGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CCA 90 bp GCCATTGCCTCTCTCTCCTCCACGGTCTTAGGGATCCCAAGGAAGAGAAGTGAGGTACAGGATGCCCAGTaGACTGATGAAGGAAACCCC +
Preference number: 4 (lower is better)
Translates to: AIASLSSTVLGIPRKRSEVQDAQ*TDEGNP
Trigger: GGGGTTTCCTTCATCAGTCCACTGGGCATCCTGTAC...CTCACTTCTCTTCCTTGGGATCCCTAAGACCGTGGAGGAGAGAGAGGCAATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
CDS-3UTR CCA 90 bp ACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCCCAAAGGCGCCATaGCCCAGACCCCGAATGAGG +
Preference number: 4 (lower is better)
Translates to: TKRDIWSLVCEGAIASLSSPKAP*PRPRMR
Trigger: CCTCATTCGGGGTCTGGGCCATGGCGCCTTTGGGGA...GGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp CTACAATGTATAAAGGCATTCTGTAAACATGGGCAGCAGGGGTCCCGGGCTGAGGGCATTCCGGACACCTaGCCTTCATACACCTCCCCA +
Preference number: 4 (lower is better)
Translates to: LQCIKAFCKHGQQGSRAEGIPDT*PSYTSP
Trigger: TGGGGAGGTGTATGAAGGCCAGGTGTCCGGAATGCC...CTCAGCCCGGGACCCCTGCTGCCCATGTTTACAGAATGCCTTTATACATTGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453137.1
CDS-3UTR CCA 90 bp CTCTCCTCCACGGTCTTAGGGATCCCAAGGAAGAGAAGTGAGTGTGCGACCGAGGCAGCAATGTCTCGGTaGATGAAGTGGTTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: LSSTVLGIPRKRSECATEAAMSR*MKWFSS
Trigger: GGAGGAAAACCACTTCATCCACCGAGACATTGCTGC...CTCGGTCGCACACTCACTTCTCTTCCTTGGGATCCCTAAGACCGTGGAGGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp AGCTCCAGCAGGATGAACCGGGGCAGGGATTGCAGGCTCACCCCAATGCAGCGATTCCTCTTCCACAAGTaGACCATATTCTATCGGCAA +
Preference number: 4 (lower is better)
Translates to: SSSRMNRGRDCRLTPMQRFLFHK*TIFYRQ
Trigger: TTGCCGATAGAATATGGTCCACTTGTGGAAGAGGAA...TCGCTGCATTGGGGTGAGCCTGCAATCCCTGCCCCGGTTCATCCTGCTGGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431873.6
CDS-3UTR CCA 90 bp ACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCGGTGGTAGGCAGAGGTaGTGGGGCAGCTGGGCTGCG +
Preference number: 4 (lower is better)
Translates to: TKQNVTFGLWFVKEPLPLGGRQR*WGSWAA
Trigger: CGCAGCCCAGCTGCCCCACCACCTCTGCCTACCACC...GAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp CTCTCCTCCACGGTCTTAGGGATCCCAAGGAAGAGAAGTGAGTGTGCGACCGAGGTTACCCCTGTCGTGTaGCTCCTTCTTTGCTATAGG +
Preference number: 4 (lower is better)
Translates to: LSSTVLGIPRKRSECATEVTPVV*LLLCYR
Trigger: CCTATAGCAAAGAAGGAGCCACACGACAGGGGTAAC...CTCGGTCGCACACTCACTTCTCTTCCTTGGGATCCCTAAGACCGTGGAGGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp CTCTCCTCCACGGTCTTAGGGATCCCAAGGAAGAGAAGTGAGTGTGCGACCGAGAGTTGCAACGTTAGGTaGGACAGTACAGCTTCCCTC +
Preference number: 4 (lower is better)
Translates to: LSSTVLGIPRKRSECATESCNVR*DSTASL
Trigger: GAGGGAAGCTGTACTGTCCCACCTAACGTTGCAACT...CTCGGTCGCACACTCACTTCTCTTCCTTGGGATCCCTAAGACCGTGGAGGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp CTCTCCTCCACGGTCTTAGGGATCCCAAGGAAGAGAAGTGAGTGTGCGACCGAGGTACCTCCTTCATATTaGCAGTCAGCGAAGAGGGCT +
Preference number: 4 (lower is better)
Translates to: LSSTVLGIPRKRSECATEVPPSY*QSAKRA
Trigger: AGCCCTCTTCGCTGACTGCCAATATGAAGGAGGTAC...CTCGGTCGCACACTCACTTCTCTTCCTTGGGATCCCTAAGACCGTGGAGGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp GCCATTGCCTCTCTCTCCTCCACGGTCTTAGGGATCCCAAGGAAGAGAAGTGAGGCTCAGGGCCCAGGCTaGTTCATGCTATTCTTGCTT +
Preference number: 4 (lower is better)
Translates to: AIASLSSTVLGIPRKRSEAQGPG*FMLFLL
Trigger: AAGCAAGAATAGCATGAACCAGCCTGGGCCCTGAGC...CTCACTTCTCTTCCTTGGGATCCCTAAGACCGTGGAGGAGAGAGAGGCAATGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR TCA 90 bp CTCTCCTCCACGGTCTTAGGGATCCCAAGGAAGAGAAGTGAGTGTGCGACCGAGGGTAGCAGTCCAGGCTaGTGGAGATATTGTCAAAAG +
Preference number: 4 (lower is better)
Translates to: LSSTVLGIPRKRSECATEGSSPG*WRYCQK
Trigger: CTTTTGACAATATCTCCATCAGCCTGGACTGCTACC...CTCGGTCGCACACTCACTTCTCTTCCTTGGGATCCCTAAGACCGTGGAGGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR TCA 90 bp GCCATTGCCTCTCTCTCCTCCACGGTCTTAGGGATCCCAAGGAAGAGAAGTGAGGAAGGAGGGTTGGACTaGGAGAATGCCATATTCACG +
Preference number: 4 (lower is better)
Translates to: AIASLSSTVLGIPRKRSEEGGLD*ENAIFT
Trigger: CGTGAATATGGCATTCTCTCAGTCCAACCCTCCTTC...CTCACTTCTCTTCCTTGGGATCCCTAAGACCGTGGAGGAGAGAGAGGCAATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR TCA 90 bp GCCATTGCCTCTCTCTCCTCCACGGTCTTAGGGATCCCAAGGAAGAGAAGTGAGGCTGGTAGCCGTAATTaGCATTCCCACAAGGGAAGT +
Preference number: 4 (lower is better)
Translates to: AIASLSSTVLGIPRKRSEAGSRN*HSHKGS
Trigger: ACTTCCCTTGTGGGAATGTCAATTACGGCTACCAGC...CTCACTTCTCTTCCTTGGGATCCCTAAGACCGTGGAGGAGAGAGAGGCAATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR GCA 90 bp CAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCGGAGGCTGCCGTCTTaGGCACCCTCAAGCTATCTC +
Preference number: 4 (lower is better)
Translates to: QNVTFGLWFVKEPLPLSPRRLPS*APSSYL
Trigger: GAGATAGCTTGAGGGTGCGCAAGACGGCAGCCTCCG...AGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS-3UTR GCA 90 bp TGGCACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCCTCCAAGCTCTTCTaGCCGGTCTGGGCGGGAACC +
Preference number: 4 (lower is better)
Translates to: WHKTKRDIWSLVCEGAIASSKLF*PVWAGT
Trigger: GGTTCCCGCCCAGACCGGGCAGAAGAGCTTGGAGGA...GGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS-3UTR GCA 90 bp CAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTAGCTCCAGCACCAACTaGTTGGCACGCCGGAGCTTG +
Preference number: 4 (lower is better)
Translates to: QNVTFGLWFVKEPLPLSPSSSTN*LARRSL
Trigger: CAAGCTCCGGCGTGCCAAGCAGTTGGTGCTGGAGCT...AGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS-3UTR GCA 90 bp CGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCACGCAGACCATCCTGCCTTaGTCCTTCCCGGTTTTGTTC +
Preference number: 4 (lower is better)
Translates to: RDIWSLVCEGAIASLSSTQTILP*SFPVLF
Trigger: GAACAAAACCGGGAAGGAGCAAGGCAGGATGGTCTG...CGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR GCA 90 bp CAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTAACCGGGGCAGGGATTaGAGGCTCACCCCAATGCAG +
Preference number: 4 (lower is better)
Translates to: QNVTFGLWFVKEPLPLSPNRGRD*RLTPMQ
Trigger: CTGCATTGGGGTGAGCCTGCAATCCCTGCCCCGGTT...AGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR GCA 90 bp ACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCATGTCCCGAGCCACGTaGAGAAGGTCCAGCATGGCC +
Preference number: 4 (lower is better)
Translates to: TKRDIWSLVCEGAIASLSMSRAT*RRSSMA
Trigger: GGCCATGCTGGACCTTCTGCACGTGGCTCGGGACAT...GGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR GCA 90 bp GCCATTGCCTCTCTCTCCTCCACGGTCTTAGGGATCCCAAGGAAGAGAAGTGAGCCAGAACTTCCTGGTTaGTTTTGCTGGGGTATGGCA +
Preference number: 4 (lower is better)
Translates to: AIASLSSTVLGIPRKRSEPELPG*FCWGMA
Trigger: TGCCATACCCCAGCAAAAGCAACCAGGAAGTTCTGG...CTCACTTCTCTTCCTTGGGATCCCTAAGACCGTGGAGGAGAGAGAGGCAATGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR GCA 90 bp CGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCACGCATCCGGGTCCTGGGTaGAGTATTCAATCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: RDIWSLVCEGAIASLSSTHPGPG*SIQSSP
Trigger: TGGAGAGGATTGAATACTGCACCCAGGACCCGGATG...CGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR GCA 90 bp ACTGAGTCATTATCCGGTATACAGGCCCAGGGCAGTTCTTGGGTGGGTCCATCCGTTGGACTGAGAGAATaGCATATTCACGTGTCCCCC +
Preference number: 4 (lower is better)
Translates to: TESLSGIQAQGSSWVGPSVGLRE*HIHVSP
Trigger: GGGGGACACGTGAATATGGCATTCTCTCAGTCCAAC...GGATGGACCCACCCAAGAACTGCCCTGGGCCTGTATACCGGATAATGACTCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431873.6
CDS-3UTR CCA 90 bp ACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCAAGAGAAGGCGGGGCTaGGAGGCGCGAATTGCCGCG +
Preference number: 4 (lower is better)
Translates to: TKQNVTFGLWFVKEPLPLKRRRG*EARIAA
Trigger: CGCGGCAATTCGCGCCTCCCAGCCCCGCCTTCTCTT...GAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS-3UTR CCA 90 bp CGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCACGAGTTTCCGGCACATCTaGCTCTCATCTTCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: RDIWSLVCEGAIASLSSTSFRHI*LSSSPW
Trigger: CCAGGGAGAAGATGAGAGCCAGATGTGCCGGAAACT...CGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CCA 90 bp CAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTGGCACCTTCCAGATCTaGATGCCTTTCAGGGGGCCC +
Preference number: 4 (lower is better)
Translates to: QNVTFGLWFVKEPLPLSPGTFQI*MPFRGP
Trigger: GGGCCCCCTGAAAGGCATCCAGATCTGGAAGGTGCC...AGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CCA 90 bp CGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCACGTTAACTGGTTTGTACTaGGGCAGGCGTCCTCTCCCT +
Preference number: 4 (lower is better)
Translates to: RDIWSLVCEGAIASLSSTLTGLY*GRRPLP
Trigger: AGGGAGAGGACGCCTGCCCCAGTACAAACCAGTTAA...CGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CCA 90 bp CTCTCCTCCACGGTCTTAGGGATCCCAAGGAAGAGAAGTGAGTGTGCGACCGAGACTTTCTGGATTAACTaGTTTGTACTGGGGCAGGCG +
Preference number: 4 (lower is better)
Translates to: LSSTVLGIPRKRSECATETFWIN*FVLGQA
Trigger: CGCCTGCCCCAGTACAAACCAGTTAATCCAGAAAGT...CTCGGTCGCACACTCACTTCTCTTCCTTGGGATCCCTAAGACCGTGGAGGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CCA 90 bp CAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTGGTGTGGCTCCGGGGTaGGTGACACAATGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: QNVTFGLWFVKEPLPLSPGVAPG*VTQCRR
Trigger: TCTCCTGCATTGTGTCACCCACCCCGGAGCCACACC...AGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
CDS-3UTR CCA 90 bp TGGCACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCGAGGATCAGCGAGAGTaGCAGGTGTGGCTCCGGGGT +
Preference number: 4 (lower is better)
Translates to: WHKTKRDIWSLVCEGAIAEDQRE*QVWLRG
Trigger: ACCCCGGAGCCACACCTGCCACTCTCGCTGATCCTC...GGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
CDS-3UTR CCA 90 bp TGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCACGGTCTTAGGGTCAAGAGGCAGTTTCTaGCAGCAATGTCTCGGTGGA +
Preference number: 4 (lower is better)
Translates to: WSLVCEGAIASLSSTVLGSRGSF*QQCLGG
Trigger: TCCACCGAGACATTGCTGCCAGAAACTGCCTCTTGA...CCCTAAGACCGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp CAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCCCCTCAGGGTCCTTaGGCCTCACAGGCACTTTCT +
Preference number: 4 (lower is better)
Translates to: QNVTFGLWFVKEPLPLSPPPQGP*ASQALS
Trigger: AGAAAGTGCCTGTGAGGCCCAAGGACCCTGAGGGGG...AGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp TCCCATAGCAGCACTCCAAAGGACCATGTGTCTGTTTTAGAAGTGAATATTCCTGGTGGTAGGCAGAGGTaGTGGGGCAGCTGGGCTGCG +
Preference number: 4 (lower is better)
Translates to: SHSSTPKDHVSVLEVNIPGGRQR*WGSWAA
Trigger: CGCAGCCCAGCTGCCCCACCACCTCTGCCTACCACC...AGGAATATTCACTTCTAAAACAGACACATGGTCCTTTGGAGTGCTGCTATGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431873.6
CDS-3UTR CCA 90 bp TGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCACGGTCTTAGGGTTGGGTTCCACAAGCTaGTGGGCTTGTTTCTGGATC +
Preference number: 4 (lower is better)
Translates to: WSLVCEGAIASLSSTVLGLGSTS*WACFWI
Trigger: GATCCAGAAACAAGCCCACCAGCTTGTGGAACCCAA...CCCTAAGACCGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp ACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCCCAGGAGCCGTACGTTaGGTTCCACAAGCTGGTGGG +
Preference number: 4 (lower is better)
Translates to: TKRDIWSLVCEGAIASLSPGAVR*VPQAGG
Trigger: CCCACCAGCTTGTGGAACCCAACGTACGGCTCCTGG...GGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp GCCATTGCCTCTCTCTCCTCCACGGTCTTAGGGATCCCAAGGAAGAGAAGTGAGAGTTGCAACGTTAGGTaGGACAGTACAGCTTCCCTC +
Preference number: 4 (lower is better)
Translates to: AIASLSSTVLGIPRKRSESCNVR*DSTASL
Trigger: GAGGGAAGCTGTACTGTCCCACCTAACGTTGCAACT...CTCACTTCTCTTCCTTGGGATCCCTAAGACCGTGGAGGAGAGAGAGGCAATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp CGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCACGGCTCAGGGCCCAGGCTaGTTCATGCTATTCTTGCTT +
Preference number: 4 (lower is better)
Translates to: RDIWSLVCEGAIASLSSTAQGPG*FMLFLL
Trigger: AAGCAAGAATAGCATGAACCAGCCTGGGCCCTGAGC...CGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR TCA 90 bp TGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCACGGTCTTAGGGGAGCAGGAGTCTAAATaGAACAGACCTGGAAGCTCA +
Preference number: 4 (lower is better)
Translates to: WSLVCEGAIASLSSTVLGEQESK*NRPGSS
Trigger: TGAGCTTCCAGGTCTGTTTCATTTAGACTCCTGCTC...CCCTAAGACCGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS-3UTR TCA 90 bp GCCATTGCCTCTCTCTCCTCCACGGTCTTAGGGATCCCAAGGAAGAGAAGTGAGAGGCATGTTTGTTGGTaGTTCCAAGGAGCTATGACC +
Preference number: 4 (lower is better)
Translates to: AIASLSSTVLGIPRKRSERHVCW*FQGAMT
Trigger: GGTCATAGCTCCTTGGAATCACCAACAAACATGCCT...CTCACTTCTCTTCCTTGGGATCCCTAAGACCGTGGAGGAGAGAGAGGCAATGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR TCA 90 bp ACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCGTCCTGACCTGCCATTaGGGAGTGTGGGGTGACAGT +
Preference number: 4 (lower is better)
Translates to: TKRDIWSLVCEGAIASLSVLTCH*GVWGDS
Trigger: ACTGTCACCCCACACTCCTCAATGGCAGGTCAGGAC...GGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR TCA 90 bp TGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCACGGTCTTAGGGGGACATCAGTGGTACTaGGCAATAGAGCATGGTCTT +
Preference number: 4 (lower is better)
Translates to: WSLVCEGAIASLSSTVLGGHQWY*AIEHGL
Trigger: AAGACCATGCTCTATTGCTCAGTACCACTGATGTCC...CCCTAAGACCGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR TCA 90 bp GCCATTGCCTCTCTCTCCTCCACGGTCTTAGGGATCCCAAGGAAGAGAAGTGAGTTTTCCTCCAAATACTaGCAGCCACAGGCAATGTCC +
Preference number: 4 (lower is better)
Translates to: AIASLSSTVLGIPRKRSEFSSKY*QPQAMS
Trigger: GGACATTGCCTGTGGCTGTCAGTATTTGGAGGAAAA...CTCACTTCTCTTCCTTGGGATCCCTAAGACCGTGGAGGAGAGAGAGGCAATGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR TCA 90 bp TGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCACGGTCTTAGGGCAATCCTCTCCAAAATaGTGGCAAAGTTGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: WSLVCEGAIASLSSTVLGQSSPK*WQSWAC
Trigger: ACAGGCCCAACTTTGCCATCATTTTGGAGAGGATTG...CCCTAAGACCGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR TCA 90 bp ACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCCCCAAGGAAGAGAAGTaGGTGTGCGACCGAGCTCAG +
Preference number: 4 (lower is better)
Translates to: TKRDIWSLVCEGAIASLSPKEEK*VCDRAQ
Trigger: CTGAGCTCGGTCGCACACTCACTTCTCTTCCTTGGG...GGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR GCA 90 bp CAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTACGGCCAGTGTGCAGTaGTCACTGCTGCTCCTCATC +
Preference number: 4 (lower is better)
Translates to: QNVTFGLWFVKEPLPLSPTASVQ*SLLLLI
Trigger: GATGAGGAGCAGCAGTGAGCACTGCACACTGGCCGT...AGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR GCA 90 bp ACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCCAGGAGGATCTCTCTTaGAGCCTCGTTGTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: TKRDIWSLVCEGAIASLSQEDLS*SLVVGQ
Trigger: CTGCCCCACAACGAGGCTGCAAGAGAGATCCTCCTG...GGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR GCA 90 bp TGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCACGGTCTTAGGGGGGATGTTCCTTCACTaGAGTTCTTCAGGGCAAAGA +
Preference number: 4 (lower is better)
Translates to: WSLVCEGAIASLSSTVLGGMFLH*SSSGQR
Trigger: TCTTTGCCCTGAAGAACTGCAGTGAAGGAACATCCC...CCCTAAGACCGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR GCA 90 bp CAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTTCCATCTGCATGGCTTaGAGCTCCTGGTGCTTCCGG +
Preference number: 4 (lower is better)
Translates to: QNVTFGLWFVKEPLPLSPSICMA*SSWCFR
Trigger: CCGGAAGCACCAGGAGCTGCAAGCCATGCAGATGGA...AGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR GCA 90 bp CAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCTCTGCAGCTCCATCTaGATGGCTTGCAGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: QNVTFGLWFVKEPLPLSPLCSSI*MACSSW
Trigger: CCAGGAGCTGCAAGCCATGCAGATGGAGCTGCAGAG...AGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR GCA 90 bp TCCGTGGACCTTGTGCAACTCCGAAGGAGGGTTGGACTGAGAGAATGCCATATTTTGTACTCAGGGCTCTaGAGCTCCATCTGCATGGCT +
Preference number: 4 (lower is better)
Translates to: SVDLVQLRRRVGLRECHILYSGL*SSICMA
Trigger: AGCCATGCAGATGGAGCTGCAGAGCCCTGAGTACAA...AATATGGCATTCTCTCAGTCCAACCCTCCTTCGGAGTTGCACAAGGTCCACGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431873.6
CDS-3UTR GCA 90 bp ACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCGTCTTCACAGCCACTTaGAGGGGGCTTGGGTCGTTG +
Preference number: 4 (lower is better)
Translates to: TKRDIWSLVCEGAIASLSVFTAT*RGLGSL
Trigger: CAACGACCCAAGCCCCCTGCAAGTGGCTGTGAAGAC...GGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR GCA 90 bp CGGGTCCTGGGTGCAGTATTCAATCCTCTCCAAAATGATGGCAAAGTTGGGCCTCATCCGGGTCCTGGGTaGAGTATTCAATCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: RVLGAVFNPLQNDGKVGPHPGPG*SIQSSP
Trigger: TGGAGAGGATTGAATACTGCACCCAGGACCCGGATG...AGGCCCAACTTTGCCATCATTTTGGAGAGGATTGAATACTGCACCCAGGACCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431873.6
CDS-3UTR GCA 90 bp TGGCAGTCAGCGAAGAGGGCTCTAGGAGCAGTGAGGCCCCCGGAAGTCTCCCAGGTGTGGCTCCTTCTTTaGTATAGGATTATTCTTTTT +
Preference number: 4 (lower is better)
Translates to: WQSAKRALGAVRPPEVSQVWLLL*YRIILF
Trigger: AAAAAGAATAATCCTATAGCAAAGAAGGAGCCACAC...CTGGGAGACTTCCGGGGGCCTCACTGCTCCTAGAGCCCTCTTCGCTGACTGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431873.6
CDS-3UTR CCA 90 bp ACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTGCTGCACGCTGTCCTaGCCGCCTTTTGCGTTCCTT +
Preference number: 4 (lower is better)
Translates to: TKRDIWSLVCEGAIASLSCCTLS*PPFAFL
Trigger: AAGGAACGCAAAAGGCGGCCAGGACAGCGTGCAGCA...GGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS-3UTR CCA 90 bp GCCATTGCCTCTCTCTCCTCCACGGTCTTAGGGATCCCAAGGAAGAGAAGTGAGACAGAGGAACTACTATaGTTGAAGGGAGGTGGCAGT +
Preference number: 4 (lower is better)
Translates to: AIASLSSTVLGIPRKRSETEELL*LKGGGS
Trigger: ACTGCCACCTCCCTTCAACCATAGTAGTTCCTCTGT...CTCACTTCTCTTCCTTGGGATCCCTAAGACCGTGGAGGAGAGAGAGGCAATGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS-3UTR CCA 90 bp TGGCACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCCCAGTCCCGAAGATCTaGAAGAGAAGGCGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: WHKTKRDIWSLVCEGAIAPVPKI*KRRRGW
Trigger: CCAGCCCCGCCTTCTCTTCCAGATCTTCGGGACTGG...GGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS-3UTR CCA 90 bp ACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCCGCCCGATTCTTCCCTaGAGCACTGTCCAACCATGC +
Preference number: 4 (lower is better)
Translates to: TKRDIWSLVCEGAIASLSRPILP*STVQPC
Trigger: GCATGGTTGGACAGTGCTCCAGGGAAGAATCGGGCG...GGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CCA 90 bp ACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCGGTGACAGTGTGCCTTaGGTCCAGCCACAGAAGCCA +
Preference number: 4 (lower is better)
Translates to: TKRDIWSLVCEGAIASLSGDSVP*VQPQKP
Trigger: TGGCTTCTGTGGCTGGACCCAAGGCACACTGTCACC...GGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CCA 90 bp CAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCACTTCTTCATGGCCTaGGGGCAGGAATGTCCTCCG +
Preference number: 4 (lower is better)
Translates to: QNVTFGLWFVKEPLPLSPHFFMA*GQECPP
Trigger: CGGAGGACATTCCTGCCCCCAGGCCATGAAGAAGTG...AGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CCA 90 bp CAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTACCCCCACTTCTTCATaGCCTGGGGGCAGGAATGTC +
Preference number: 4 (lower is better)
Translates to: QNVTFGLWFVKEPLPLSPTPTSS*PGGRNV
Trigger: GACATTCCTGCCCCCAGGCCATGAAGAAGTGGGGGT...AGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CCA 90 bp AACAGAGGTACCTCCTTCATATTGGCAGTCAGCGAAGAGGGCTCTAGGAGCAGTGTACAGGATGCCCAGTaGACTGATGAAGGAAACCCC +
Preference number: 4 (lower is better)
Translates to: NRGTSFILAVSEEGSRSSVQDAQ*TDEGNP
Trigger: GGGGTTTCCTTCATCAGTCCACTGGGCATCCTGTAC...ACTGCTCCTAGAGCCCTCTTCGCTGACTGCCAATATGAAGGAGGTACCTCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431873.6
CDS-3UTR CCA 90 bp TGGCACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCGGTGTGGCTCCGGGGTaGGTGACACAATGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: WHKTKRDIWSLVCEGAIAGVAPG*VTQCRR
Trigger: TCTCCTGCATTGTGTCACCCACCCCGGAGCCACACC...GGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
CDS-3UTR CCA 90 bp AAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCCCAAAGGCGCCATaGCCCAGACCCCGAATGAGG +
Preference number: 4 (lower is better)
Translates to: KTKRDIWSLVCEGAIASLSPKAP*PRPRMR
Trigger: CCTCATTCGGGGTCTGGGCCATGGCGCCTTTGGGGA...GAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp TGGCACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCCACTTGCAGGGGGCTTaGGTCGTTGGGCATTCCGGA +
Preference number: 4 (lower is better)
Translates to: WHKTKRDIWSLVCEGAIAHLQGA*VVGHSG
Trigger: TCCGGAATGCCCAACGACCCAAGCCCCCTGCAAGTG...GGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGTGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp CAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTGGGCATCCACTTAACTaGCAGCATGGCACAGCCTCC +
Preference number: 4 (lower is better)
Translates to: QNVTFGLWFVKEPLPLSPGHPLN*QHGTAS
Trigger: GGAGGCTGTGCCATGCTGCCAGTTAAGTGGATGCCC...AGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp TGGCACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCAGGGCAGTTCTTGGGTaGGTCCATCCGGCCTCCACT +
Preference number: 4 (lower is better)
Translates to: WHKTKRDIWSLVCEGAIARAVLG*VHPAST
Trigger: AGTGGAGGCCGGATGGACCCACCCAAGAACTGCCCT...GGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp TGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCACGGTCTTAGGGTTGTTTCTGGATCCGTaGACCTTGTGCAACTCCGAA +
Preference number: 4 (lower is better)
Translates to: WSLVCEGAIASLSSTVLGLFLDP*TLCNSE
Trigger: TTCGGAGTTGCACAAGGTCCACGGATCCAGAAACAA...CCCTAAGACCGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp GACTCGAACAGAGATCTCTGCAGCTGTGGGTTTCTTTGCAGCCTTGCCAGAGGATTGGGTTCCACAAGCTaGTGGGCTTGTTTCTGGATC +
Preference number: 4 (lower is better)
Translates to: DSNRDLCSCGFLCSLARGLGSTS*WACFWI
Trigger: GATCCAGAAACAAGCCCACCAGCTTGTGGAACCCAA...TCCTCTGGCAAGGCTGCAAAGAAACCCACAGCTGCAGAGATCTCTGTTCGAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431873.6
CDS-3UTR TCA 90 bp CAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTGATGGGAAGAGGCTCTaGACAGTCCTTGGTACCCAG +
Preference number: 4 (lower is better)
Translates to: QNVTFGLWFVKEPLPLSPDGKRL*TVLGTQ
Trigger: CTGGGTACCAAGGACTGTTCAGAGCCTCTTCCCATC...AGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS-3UTR TCA 90 bp GTTTTTCCGCGGCACCTCCTTCAGGTCACTGATGGAGGAGGTCTTGCCAGCAAACAATGTCTCGGTGGATaGAGTGGTTTTCCTCCAAAT +
Preference number: 4 (lower is better)
Translates to: VFPRHLLQVTDGGGLASKQCLGG*SGFPPN
Trigger: ATTTGGAGGAAAACCACTTCATCCACCGAGACATTG...TTTGCTGGCAAGACCTCCTCCATCAGTGACCTGAAGGAGGTGCCGCGGAAAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000431873.6
CDS-3UTR TCA 90 bp ACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCGGCCTCCACTGGTaGCAAACTCCAGAACTTCCT +
Preference number: 4 (lower is better)
Translates to: TKRDIWSLVCEGAIASLSSGLHW*QTPELP
Trigger: AGGAAGTTCTGGAGTTTGTCACCAGTGGAGGCCGGA...GGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR TCA 90 bp CAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTTCCCGTTTTGCCTGTTaGGAGACCAGGAGAGGAGGA +
Preference number: 4 (lower is better)
Translates to: QNVTFGLWFVKEPLPLSPSRFAC*ETRRGG
Trigger: TCCTCCTCTCCTGGTCTCTCAACAGGCAAAACGGGA...AGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR TCA 90 bp CAGCCCCAGGTTACCCCTGTCGTGTGGCTCCTTCTTTGCTATAGGATTATTCTTTTCCCACAAGGGAAGTaGCGTAGCCTGAACAGAGGT +
Preference number: 4 (lower is better)
Translates to: QPQVTPVVWLLLCYRIILFPQGK*RSLNRG
Trigger: ACCTCTGTTCAGGCTACGTCACTTCCCTTGTGGGAA...AAGAATAATCCTATAGCAAAGAAGGAGCCACACGACAGGGGTAACCTGGGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000431873.6
CDS-3UTR GCA 90 bp TGGCACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCAGGCTTCGGACTGTCTaGCTGCTGAACTTCTGGGCG +
Preference number: 4 (lower is better)
Translates to: WHKTKRDIWSLVCEGAIARLRTV*LLNFWA
Trigger: CGCCCAGAAGTTCAGCAGGCAGACAGTCCGAAGCCT...GGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS-3UTR GCA 90 bp CAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTAAGCTATCTCTCCGCTaGGGGAAGGCTTCGGACTGT +
Preference number: 4 (lower is better)
Translates to: QNVTFGLWFVKEPLPLSPKLSLR*GKASDC
Trigger: ACAGTCCGAAGCCTTCCCGCAGCGGAGAGATAGCTT...AGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS-3UTR GCA 90 bp ATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATTTTGCTCTCCGCGCCGAGTaGCGCGCCCCCGTCTGTAGC +
Preference number: 4 (lower is better)
Translates to: MHKNLMQPHLGLVFITHFALRAE*RAPVCS
Trigger: GCTACAGACGGGGGCGCGGCACTCGGCGCGGAGAGC...AAAATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS-3UTR GCA 90 bp ACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCATCTCCAGAGGACTGTaGGTGCGCGCAAGTCTCTTG +
Preference number: 4 (lower is better)
Translates to: TKRDIWSLVCEGAIASLSISRGL*VRASLL
Trigger: CAAGAGACTTGCGCGCACGCACAGTCCTCTGGAGAT...GGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS-3UTR GCA 90 bp TGGCACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCACAGCCTTCCCTCTCTaGCCACTTCCGACGCCTTCT +
Preference number: 4 (lower is better)
Translates to: WHKTKRDIWSLVCEGAIATAFPL*PLPTPS
Trigger: AGAAGGCGTCGGAAGTGGGCAGAGAGGGAAGGCTGT...GGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS-3UTR GCA 90 bp ACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTACCTTCCAGAGGGCTaGAGGTGCCTGTGCACCGAG +
Preference number: 4 (lower is better)
Translates to: TKQNVTFGLWFVKEPLPLYLPEG*RCLCTE
Trigger: CTCGGTGCACAGGCACCTGCAGCCCTCTGGAAGGTA...GAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR GCA 90 bp CAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCAAGTGAAGGAGCTCTaGAGGGCCATCTTGGAGCCT +
Preference number: 4 (lower is better)
Translates to: QNVTFGLWFVKEPLPLSPQVKEL*RAILEP
Trigger: AGGCTCCAAGATGGCCCTGCAGAGCTCCTTCACTTG...AGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR GCA 90 bp TGGCACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTGGAAGTCACAGGCCTaGCCAAGCTGGAGGACTGTC +
Preference number: 4 (lower is better)
Translates to: WHKTKRDIWSLVCEGAIAWKSQA*PSWRTV
Trigger: GACAGTCCTCCAGCTTGGGCAGGCCTGTGACTTCCA...GGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR GCA 90 bp ACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTGGTAGGCGTTGTTaGACTGTGCCTGGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: TKQNVTFGLWFVKEPLPLSGRRC*TVPGWG
Trigger: GCCCCACCCAGGCACAGTGCAACAACGCCTACCAGA...GAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR GCA 90 bp TGGCACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCCTGCGGCTCCGGAATTaGCGTTTAGCCCTAGAACCG +
Preference number: 4 (lower is better)
Translates to: WHKTKRDIWSLVCEGAIALRLRN*RLALEP
Trigger: CGGTTCTAGGGCTAAACGGCAATTCCGGAGCCGCAG...GGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR GCA 90 bp TGGCACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCCTCTGCAGCTCCATCTaGATGGCTTGCAGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: WHKTKRDIWSLVCEGAIALCSSI*MACSSW
Trigger: CCAGGAGCTGCAAGCCATGCAGATGGAGCTGCAGAG...GGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR GCA 90 bp TGGCACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCGTCTTCACAGCCACTTaGAGGGGGCTTGGGTCGTTG +
Preference number: 4 (lower is better)
Translates to: WHKTKRDIWSLVCEGAIAVFTAT*RGLGSL
Trigger: CAACGACCCAAGCCCCCTGCAAGTGGCTGTGAAGAC...GGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGTGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR GCA 90 bp ACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCAACCGGGGCAGGGATTaGAGGCTCACCCCAATGCAG +
Preference number: 4 (lower is better)
Translates to: TKQNVTFGLWFVKEPLPLNRGRD*RLTPMQ
Trigger: CTGCATTGGGGTGAGCCTGCAATCCCTGCCCCGGTT...GAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR GCA 90 bp ACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCATGTCCCGAGCCACGTaGAGAAGGTCCAGCATGGCC +
Preference number: 4 (lower is better)
Translates to: TKQNVTFGLWFVKEPLPLMSRAT*RRSSMA
Trigger: GGCCATGCTGGACCTTCTGCACGTGGCTCGGGACAT...GAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR GCA 90 bp TGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCACGGTCTTAGGGCTTCCTGGTTGCTTTTaGTGGGGTATGGCATATATC +
Preference number: 4 (lower is better)
Translates to: WSLVCEGAIASLSSTVLGLPGCF*WGMAYI
Trigger: GATATATGCCATACCCCAGCAAAAGCAACCAGGAAG...CCCTAAGACCGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR GCA 90 bp CAGCGAACAATGTTCTGGTGGTTGAATTTGCTGATGATCAGGGCTTCCATGAGGGATCCGTGGACCTTGTaGAACTCCGAAGGAGGGTTG +
Preference number: 4 (lower is better)
Translates to: QRTMFWWLNLLMIRASMRDPWTL*NSEGGL
Trigger: CAACCCTCCTTCGGAGTTGCACAAGGTCCACGGATC...CCTCATGGAAGCCCTGATCATCAGCAAATTCAACCACCAGAACATTGTTCGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431873.6
CDS-3UTR GCA 90 bp ACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCGATCCGTGGACCTTGTaGAACTCCGAAGGAGGGTTG +
Preference number: 4 (lower is better)
Translates to: TKRDIWSLVCEGAIASLSDPWTL*NSEGGL
Trigger: CAACCCTCCTTCGGAGTTGCACAAGGTCCACGGATC...GGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR GCA 90 bp CTCTCCTCCACGGTCTTAGGGATCCCAAGGAAGAGAAGTGAGTGTGCGACCGAGTGCATAAAAACCTTATaGAACCACATCTGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: LSSTVLGIPRKRSECATECIKTL*NHIWAL
Trigger: CAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCA...CTCGGTCGCACACTCACTTCTCTTCCTTGGGATCCCTAAGACCGTGGAGGAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR GCA 90 bp AAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCGCTTGCAGCTCCTGGTaGTTCCGGCGGTACACTGCA +
Preference number: 4 (lower is better)
Translates to: KTKRDIWSLVCEGAIASLACSSW*FRRYTA
Trigger: TGCAGTGTACCGCCGGAAGCACCAGGAGCTGCAAGC...GAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642122.1
CDS-3UTR CCA 90 bp AACATAGAAGCAGCTAATTCTGACTACATTGAAGCAGAGCACACACAATTTGAAAGAGTTCGCAGGCACTaGAGCGGCCCCGGCGGCAGC +
Preference number: 4 (lower is better)
Translates to: NIEAANSDYIEAEHTQFERVRRH*SGPGGS
Trigger: GCTGCCGCCGGGGCCGCTCCAGTGCCTGCGAACTCT...TTCAAATTGTGTGTGCTCTGCTTCAATGTAGTCAGAATTAGCTGCTTCTATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS-3UTR CCA 90 bp ACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCGCTGAGATTGAACTaGAGCAGCCCCACAGCCGCC +
Preference number: 4 (lower is better)
Translates to: TKQNVTFGLWFVKEPLPLSLRLN*SSPTAA
Trigger: GGCGGCTGTGGGGCTGCTCCAGTTCAATCTCAGCGA...GAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS-3UTR CCA 90 bp CAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCATGCTTCCCTGGAGTaGGCATCAGGAGGATCTCTC +
Preference number: 4 (lower is better)
Translates to: QNVTFGLWFVKEPLPLSPHASLE*ASGGSL
Trigger: GAGAGATCCTCCTGATGCCCACTCCAGGGAAGCATG...AGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CCA 90 bp CAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCAACCATGCTTCCCTaGAGTGGGCATCAGGAGGAT +
Preference number: 4 (lower is better)
Translates to: QNVTFGLWFVKEPLPLSPPTMLP*SGHQED
Trigger: ATCCTCCTGATGCCCACTCCAGGGAAGCATGGTTGG...AGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CCA 90 bp CAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTAAGCCACGATGGCTCTaGATCCTTGTCCCCACCATG +
Preference number: 4 (lower is better)
Translates to: QNVTFGLWFVKEPLPLSPKPRWL*ILVPTM
Trigger: CATGGTGGGGACAAGGATCCAGAGCCATCGTGGCTT...AGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CCA 90 bp TGGCACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCCGTGGGACCGCATCATaGTGTTCTTCCCGCCTTTCC +
Preference number: 4 (lower is better)
Translates to: WHKTKRDIWSLVCEGAIARGTAS*CSSRLS
Trigger: GGAAAGGCGGGAAGAACACCATGATGCGGTCCCACG...GGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CCA 90 bp ACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCAGTCTCTCTGGGTaGAACGTGTCTGTCTTGGCC +
Preference number: 4 (lower is better)
Translates to: TKRDIWSLVCEGAIASLSSSLSG*NVSVLA
Trigger: GGCCAAGACAGACACGTTCCACCCAGAGAGACTGGA...GGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CCA 90 bp TGGCACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCGCAGCTCCATCTGCATaGCTTGCAGCTCCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: WHKTKRDIWSLVCEGAIAAAPSA*LAAPGA
Trigger: AGCACCAGGAGCTGCAAGCCATGCAGATGGAGCTGC...GGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp TCCCATAGCAGCACTCCAAAGGACCATGTGTCTGTTTTAGAAGTGAATATTCCTTCCCCAAAGGCGCCATaGCCCAGACCCCGAATGAGG +
Preference number: 4 (lower is better)
Translates to: SHSSTPKDHVSVLEVNIPSPKAP*PRPRMR
Trigger: CCTCATTCGGGGTCTGGGCCATGGCGCCTTTGGGGA...AGGAATATTCACTTCTAAAACAGACACATGGTCCTTTGGAGTGCTGCTATGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000431873.6
CDS-3UTR CCA 90 bp CTCTCCTCCACGGTCTTAGGGATCCCAAGGAAGAGAAGTGAGTGTGCGACCGAGCAGCGAACAATGTTCTaGTGGTTGAATTTGCTGATG +
Preference number: 4 (lower is better)
Translates to: LSSTVLGIPRKRSECATEQRTMF*WLNLLM
Trigger: CATCAGCAAATTCAACCACCAGAACATTGTTCGCTG...CTCGGTCGCACACTCACTTCTCTTCCTTGGGATCCCTAAGACCGTGGAGGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp ACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCCACTCTTCCAGGGCCTaGACAGGTCAAGAGGCAGTT +
Preference number: 4 (lower is better)
Translates to: TKRDIWSLVCEGAIASLSHSSRA*TGQEAV
Trigger: AACTGCCTCTTGACCTGTCCAGGCCCTGGAAGAGTG...GGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp GCCATTGCCTCTCTCTCCTCCACGGTCTTAGGGATCCCAAGGAAGAGAAGTGAGCCTGGTTGCTTTTGCTaGGGTATGGCATATATCCAA +
Preference number: 4 (lower is better)
Translates to: AIASLSSTVLGIPRKRSEPGCFC*GMAYIQ
Trigger: TTGGATATATGCCATACCCCAGCAAAAGCAACCAGG...CTCACTTCTCTTCCTTGGGATCCCTAAGACCGTGGAGGAGAGAGAGGCAATGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp CGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCACGATTACATCCGGGTCCTaGGTGCAGTATTCAATCCTC +
Preference number: 4 (lower is better)
Translates to: RDIWSLVCEGAIASLSSTITSGS*VQYSIL
Trigger: GAGGATTGAATACTGCACCCAGGACCCGGATGTAAT...CGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp AAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCCCCCCTCAGGGTCCTTaGGCCTCACAGGCACTTTCT +
Preference number: 4 (lower is better)
Translates to: KTKRDIWSLVCEGAIASLPPQGP*ASQALS
Trigger: AGAAAGTGCCTGTGAGGCCCAAGGACCCTGAGGGGG...GAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp AACATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATAGGTGGTGGGGCAGCTaGGCTGCGCTCCTCCTCCCG +
Preference number: 4 (lower is better)
Translates to: NMHKNLMQPHLGLVFITHRWWGS*AALLLP
Trigger: CGGGAGGAGGAGCGCAGCCCAGCTGCCCCACCACCT...ATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCATGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp AACATAGAAGCAGCTAATTCTGACTACATTGAAGCAGAGCACACACAATTTGAAAGGTGGTGGGGCAGCTaGGCTGCGCTCCTCCTCCCG +
Preference number: 4 (lower is better)
Translates to: NIEAANSDYIEAEHTQFERWWGS*AALLLP
Trigger: CGGGAGGAGGAGCGCAGCCCAGCTGCCCCACCACCT...TTCAAATTGTGTGTGCTCTGCTTCAATGTAGTCAGAATTAGCTGCTTCTATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp CGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCACGACTCCGAAGGAGGGTTaGACTGAGAGAATGCCATAT +
Preference number: 4 (lower is better)
Translates to: RDIWSLVCEGAIASLSSTTPKEG*TERMPY
Trigger: ATATGGCATTCTCTCAGTCCAACCCTCCTTCGGAGT...CGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp AAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCCCAGGAGCCGTACGTTaGGTTCCACAAGCTGGTGGG +
Preference number: 4 (lower is better)
Translates to: KTKRDIWSLVCEGAIASLPGAVR*VPQAGG
Trigger: CCCACCAGCTTGTGGAACCCAACGTACGGCTCCTGG...GAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp TCCGTGGACCTTGTGCAACTCCGAAGGAGGGTTGGACTGAGAGAATGCCATATTAGTTGCAACGTTAGGTaGGACAGTACAGCTTCCCTC +
Preference number: 4 (lower is better)
Translates to: SVDLVQLRRRVGLRECHISCNVR*DSTASL
Trigger: GAGGGAAGCTGTACTGTCCCACCTAACGTTGCAACT...AATATGGCATTCTCTCAGTCCAACCCTCCTTCGGAGTTGCACAAGGTCCACGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431873.6
CDS-3UTR CCA 90 bp CAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTTACACTGCAGGTGGGTaGTCAGCTGCAACATGGCCT +
Preference number: 4 (lower is better)
Translates to: QNVTFGLWFVKEPLPLSPYTAGG*SAATWP
Trigger: AGGCCATGTTGCAGCTGACCACCCACCTGCAGTGTA...AGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642122.1
3UTR CAA 72 bp AATGATGGCAAAGTTGGGCCTGTCTTCAGGCTGATGTaGCCAGCACTGAGTCATTATCCGGTATACAGGCCC +
Preference number: 4 (lower is better)
Translates to: NDGKVGPVFRLM*PALSHYPVYRP
Trigger: GGGCCTGTATACCGGATAATGACTCAGTGCTGGCAACATCAGCCTGAAGACAGGCCCAACTTTGCCATCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431873.6
CDS-3UTR TCA 90 bp ACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCGTCCTGACCTGCCATTaGGGAGTGTGGGGTGACAGT +
Preference number: 4 (lower is better)
Translates to: TKQNVTFGLWFVKEPLPLVLTCH*GVWGDS
Trigger: ACTGTCACCCCACACTCCTCAATGGCAGGTCAGGAC...GAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR TCA 90 bp ACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTTCGGGGTCATTGTTTaGGGCTGCATTGCCGCCTAT +
Preference number: 4 (lower is better)
Translates to: TKRDIWSLVCEGAIASLSFGVIV*GCIAAY
Trigger: ATAGGCGGCAATGCAGCCTCAAACAATGACCCCGAA...GGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR TCA 90 bp ACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCGGTTGTAGTCGGTCATaGTGGTCGAGGTGCGGAGCT +
Preference number: 4 (lower is better)
Translates to: TKQNVTFGLWFVKEPLPLGCSRS*WSRCGA
Trigger: AGCTCCGCACCTCGACCATCATGACCGACTACAACC...GAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR TCA 90 bp AAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCCCTCCTTCAGGTCACTaGTGGAGGAGGTCTTGCCAG +
Preference number: 4 (lower is better)
Translates to: KTKRDIWSLVCEGAIASLPPSGH*WRRSCQ
Trigger: CTGGCAAGACCTCCTCCATCAGTGACCTGAAGGAGG...GAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR TCA 90 bp AAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCGGCAAAGCGGTGTTaGTTACATCCGGGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: KTKRDIWSLVCEGAIASLSAKRC*LHPGPG
Trigger: CCCAGGACCCGGATGTAATCAACACCGCTTTGCCGA...GAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR TCA 90 bp ACATCCGGGTCCTGGGTGCAGTATTCAATCCTCTCCAAAATGATGGCAAAGTTGGGAAGTGACGTAGCCTaGACAGAGGTACCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: TSGSWVQYSILSKMMAKLGSDVA*TEVPPS
Trigger: TGAAGGAGGTACCTCTGTTCAGGCTACGTCACTTCC...CAACTTTGCCATCATTTTGGAGAGGATTGAATACTGCACCCAGGACCCGGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431873.6
CDS-3UTR TCA 90 bp CAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTTTCCCACAAGGGAAGTaGCGTAGCCTGAACAGAGGT +
Preference number: 4 (lower is better)
Translates to: QNVTFGLWFVKEPLPLSPFPQGK*RSLNRG
Trigger: ACCTCTGTTCAGGCTACGTCACTTCCCTTGTGGGAA...AGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR TCA 90 bp AAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCCCCAAGGAAGAGAAGTaGGTGTGCGACCGAGCTCAG +
Preference number: 4 (lower is better)
Translates to: KTKRDIWSLVCEGAIASLPKEEK*VCDRAQ
Trigger: CTGAGCTCGGTCGCACACTCACTTCTCTTCCTTGGG...GAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR TCA 90 bp GCCATTGCCTCTCTCTCCTCCACGGTCTTAGGGATCCCAAGGAAGAGAAGTGAGGCACAAAACAAAACGTaGCATTTGGTCTCTGGTTTG +
Preference number: 4 (lower is better)
Translates to: AIASLSSTVLGIPRKRSEAQNKT*HLVSGL
Trigger: CAAACCAGAGACCAAATGTCACGTTTTGTTTTGTGC...CTCACTTCTCTTCCTTGGGATCCCTAAGACCGTGGAGGAGAGAGAGGCAATGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR TCA 90 bp CTCTCCTCCACGGTCTTAGGGATCCCAAGGAAGAGAAGTGAGTGTGCGACCGAGTTCGAAAGAATAGGATaGACCCATGCTCAAAACCTT +
Preference number: 4 (lower is better)
Translates to: LSSTVLGIPRKRSECATEFERIG*THAQNL
Trigger: AAGGTTTTGAGCATGGGTTCATCCTATTCTTTCGAA...CTCGGTCGCACACTCACTTCTCTTCCTTGGGATCCCTAAGACCGTGGAGGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR GCA 90 bp AACATAGAAGCAGCTAATTCTGACTACATTGAAGCAGAGCACACACAATTTGAAGGTACCGTCCTCTCCTaGCCCCCGCAGTCGGAGCTG +
Preference number: 4 (lower is better)
Translates to: NIEAANSDYIEAEHTQFEGTVLS*PPQSEL
Trigger: CAGCTCCGACTGCGGGGGGCAGGAGAGGACGGTACC...TTCAAATTGTGTGTGCTCTGCTTCAATGTAGTCAGAATTAGCTGCTTCTATGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS-3UTR GCA 90 bp AAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCCCGTCTGTAGCTCGCTaGGCTCGGTACAGAGGAACT +
Preference number: 4 (lower is better)
Translates to: KTKRDIWSLVCEGAIASLPSVAR*ARYRGT
Trigger: AGTTCCTCTGTACCGAGCGCAGCGAGCTACAGACGG...GAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS-3UTR GCA 90 bp ACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTGGTTCCTGAGGTCATaGAGTGGAGGGGAATACTCC +
Preference number: 4 (lower is better)
Translates to: TKRDIWSLVCEGAIASLSWFLRS*SGGEYS
Trigger: GGAGTATTCCCCTCCACTGCATGACCTCAGGAACCA...GGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR GCA 90 bp TGGCACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCGGCAACACCATCCACTaGCACAGGCTCAAGCCTTCA +
Preference number: 4 (lower is better)
Translates to: WHKTKRDIWSLVCEGAIAGNTIH*HRLKPS
Trigger: TGAAGGCTTGAGCCTGTGGCAGTGGATGGTGTTGCC...GGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR GCA 90 bp AAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCGCTTGCAGCTCCTGGTaGTTCCGGCGGTACACAATC +
Preference number: 4 (lower is better)
Translates to: KTKRDIWSLVCEGAIASLACSSW*FRRYTI
Trigger: GATTGTGTACCGCCGGAAGCACCAGGAGCTGCAAGC...GAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR GCA 90 bp ACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTTGTACTCAGGGCTCTaGAGCTCCATCTGCATGGCT +
Preference number: 4 (lower is better)
Translates to: TKRDIWSLVCEGAIASLSLYSGL*SSICMA
Trigger: AGCCATGCAGATGGAGCTGCAGAGCCCTGAGTACAA...GGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR GCA 90 bp AGGCACTTTCTCTTCCTCTTCCACAAGTGGACCATATTCTATCGGCAAAGCGGTGCAGGCTCACCCCAATaGAGCGAACAATGTTCTGGT +
Preference number: 4 (lower is better)
Translates to: RHFLFLFHKWTIFYRQSGAGSPQ*SEQCSG
Trigger: ACCAGAACATTGTTCGCTGCATTGGGGTGAGCCTGC...ACCGCTTTGCCGATAGAATATGGTCCACTTGTGGAAGAGGAAGAGAAAGTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431873.6
CDS-3UTR GCA 90 bp TGGCACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCCTCCTCCTCCCGTTTTaGCTGTTGAGAGACCAGGAG +
Preference number: 4 (lower is better)
Translates to: WHKTKRDIWSLVCEGAIALLLPF*LLRDQE
Trigger: CTCCTGGTCTCTCAACAGGCAAAACGGGAGGAGGAG...GGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR GCA 90 bp ACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCCGGAAGTCTCCCAGTTaGAACGTTAGGTGGGACAGT +
Preference number: 4 (lower is better)
Translates to: TKRDIWSLVCEGAIASLSRKSPS*NVRWDS
Trigger: ACTGTCCCACCTAACGTTGCAACTGGGAGACTTCCG...GGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR GCA 90 bp TCATATTGGCAGTCAGCGAAGAGGGCTCTAGGAGCAGTGAGGCCCCCGGAAGTCGGTTCATGCTATTCTTaGTTTTCAGAATGGTATCCT +
Preference number: 4 (lower is better)
Translates to: SYWQSAKRALGAVRPPEVGSCYS*FSEWYP
Trigger: AGGATACCATTCTGAAAAGCAAGAATAGCATGAACC...GACTTCCGGGGGCCTCACTGCTCCTAGAGCCCTCTTCGCTGACTGCCAATATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000431873.6
CDS-3UTR GCA 90 bp CTACAATGTATAAAGGCATTCTGTAAACATGGGCAGCAGGGGTCCCGGGCTGAGTTTCTCAGATACTGGTaGGTGGACTGGGTGCTAGAA +
Preference number: 4 (lower is better)
Translates to: LQCIKAFCKHGQQGSRAEFLRYW*VDWVLE
Trigger: TTCTAGCACCCAGTCCACGCACCAGTATCTGAGAAA...CTCAGCCCGGGACCCCTGCTGCCCATGTTTACAGAATGCCTTTATACATTGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453137.1
CDS-3UTR CCA 90 bp AAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCGACACTCAAGCACACTaGGCTCACTGGCTGGGACCT +
Preference number: 4 (lower is better)
Translates to: KTKRDIWSLVCEGAIASLDTQAH*AHWLGP
Trigger: AGGTCCCAGCCAGTGAGCCCAGTGTGCTTGAGTGTC...GAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS-3UTR CCA 90 bp ATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATTTTGCCACAGGAGCCCGATaGCTCCCATCCCGCCGGAGG +
Preference number: 4 (lower is better)
Translates to: MHKNLMQPHLGLVFITHFATGAR*LPSRRR
Trigger: CCTCCGGCGGGATGGGAGCCATCGGGCTCCTGTGGC...AAAATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS-3UTR CCA 90 bp CAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTAGTTTCCGGCACATCTaGCTCTCATCTTCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: QNVTFGLWFVKEPLPLSPSFRHI*LSSSPW
Trigger: CCAGGGAGAAGATGAGAGCCAGATGTGCCGGAAACT...AGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CCA 90 bp AAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCAGAGCATGGTCTTGGTaGTCCTGGAACCGGGCATCC +
Preference number: 4 (lower is better)
Translates to: KTKRDIWSLVCEGAIASLRAWSW*SWNRAS
Trigger: GGATGCCCGGTTCCAGGACCACCAAGACCATGCTCT...GAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CCA 90 bp ACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCAGAGCATGGTCTTGGTaGTCCTGGAACCGGGCATCC +
Preference number: 4 (lower is better)
Translates to: TKQNVTFGLWFVKEPLPLRAWSW*SWNRAS
Trigger: GGATGCCCGGTTCCAGGACCACCAAGACCATGCTCT...GAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CCA 90 bp CAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTAATAGAGCATGGTCTTaGTGGTCCTGGAACCGGGCA +
Preference number: 4 (lower is better)
Translates to: QNVTFGLWFVKEPLPLSPNRAWS*WSWNRA
Trigger: TGCCCGGTTCCAGGACCACCAAGACCATGCTCTATT...AGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CCA 90 bp ACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCAATAGAGCATGGTCTTaGTGGTCCTGGAACCGGGCA +
Preference number: 4 (lower is better)
Translates to: TKRDIWSLVCEGAIASLSNRAWS*WSWNRA
Trigger: TGCCCGGTTCCAGGACCACCAAGACCATGCTCTATT...GGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CCA 90 bp CAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCATTCGGAGCTCACATaGAGAGCTCTTGATCGGTGC +
Preference number: 4 (lower is better)
Translates to: QNVTFGLWFVKEPLPLSPHSELT*RALDRC
Trigger: GCACCGATCAAGAGCTCTCCATGTGAGCTCCGAATG...AGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CCA 90 bp ACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCAGCACAGACACGCCGTaGGACCGCATCATGGTGTTC +
Preference number: 4 (lower is better)
Translates to: TKQNVTFGLWFVKEPLPLSTDTP*DRIMVF
Trigger: GAACACCATGATGCGGTCCCACGGCGTGTCTGTGCT...GAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CCA 90 bp AAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCAGCACAGACACGCCGTaGGACCGCATCATGGTGTTC +
Preference number: 4 (lower is better)
Translates to: KTKRDIWSLVCEGAIASLSTDTP*DRIMVF
Trigger: GAACACCATGATGCGGTCCCACGGCGTGTCTGTGCT...GAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CCA 90 bp ACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCAGGAATGTCCTCCGGTaGCACCCTCCTGCAAAGATT +
Preference number: 4 (lower is better)
Translates to: TKRDIWSLVCEGAIASLSRNVLR*HPPAKI
Trigger: AATCTTTGCAGGAGGGTGCCACCGGAGGACATTCCT...GGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CCA 90 bp ACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCATGGCTTGCAGCTCCTaGTGCTTCCGGCGGTACACA +
Preference number: 4 (lower is better)
Translates to: TKQNVTFGLWFVKEPLPLMACSS*CFRRYT
Trigger: TGTGTACCGCCGGAAGCACCAGGAGCTGCAAGCCAT...GAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CCA 90 bp AAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCGCAGCTCCATCTGCATaGCTTGCAGCTCCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: KTKRDIWSLVCEGAIASLAAPSA*LAAPGA
Trigger: AGCACCAGGAGCTGCAAGCCATGCAGATGGAGCTGC...GAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp ACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCGGCATTCCGGACACCTaGCCTTCATACACCTCCCCA +
Preference number: 4 (lower is better)
Translates to: TKQNVTFGLWFVKEPLPLGIPDT*PSYTSP
Trigger: TGGGGAGGTGTATGAAGGCCAGGTGTCCGGAATGCC...GAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp TGGGAGGAACAGGATACAAAGTTACATTTTCAGCAGCTACAATGTATAAAGGCAGGGGGCTTGGGTCGTTaGGCATTCCGGACACCTGGC +
Preference number: 4 (lower is better)
Translates to: WEEQDTKLHFQQLQCIKAGGLGR*AFRTPG
Trigger: GCCAGGTGTCCGGAATGCCCAACGACCCAAGCCCCC...TGCCTTTATACATTGTAGCTGCTGAAAATGTAACTTTGTATCCTGTTCCTCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453137.1
CDS-3UTR CCA 90 bp CTCTCCTCCACGGTCTTAGGGATCCCAAGGAAGAGAAGTGAGTGTGCGACCGAGCGAACAATGTTCTGGTaGTTGAATTTGCTGATGATC +
Preference number: 4 (lower is better)
Translates to: LSSTVLGIPRKRSECATERTMFW*LNLLMI
Trigger: GATCATCAGCAAATTCAACCACCAGAACATTGTTCG...CTCGGTCGCACACTCACTTCTCTTCCTTGGGATCCCTAAGACCGTGGAGGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp GGCACTTTCTCTTCCTCTTCCACAAGTGGACCATATTCTATCGGCAAAGCGGTGGCAGCAATGTCTCGGTaGATGAAGTGGTTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: GTFSSSSTSGPYSIGKAVAAMSR*MKWFSS
Trigger: GGAGGAAAACCACTTCATCCACCGAGACATTGCTGC...CACCGCTTTGCCGATAGAATATGGTCCACTTGTGGAAGAGGAAGAGAAAGTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431873.6
CDS-3UTR CCA 90 bp TGGCACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCCACTCTTCCAGGGCCTaGACAGGTCAAGAGGCAGTT +
Preference number: 4 (lower is better)
Translates to: WHKTKRDIWSLVCEGAIAHSSRA*TGQEAV
Trigger: AACTGCCTCTTGACCTGTCCAGGCCCTGGAAGAGTG...GGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp CTCTCCTCCACGGTCTTAGGGATCCCAAGGAAGAGAAGTGAGTGTGCGACCGAGGCTTTTGCTGGGGTATaGCATATATCCAAGAGAAAA +
Preference number: 4 (lower is better)
Translates to: LSSTVLGIPRKRSECATEAFAGV*HISKRK
Trigger: TTTTCTCTTGGATATATGCCATACCCCAGCAAAAGC...CTCGGTCGCACACTCACTTCTCTTCCTTGGGATCCCTAAGACCGTGGAGGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp CGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCACGAACTCCAGAACTTCCTaGTTGCTTTTGCTGGGGTAT +
Preference number: 4 (lower is better)
Translates to: RDIWSLVCEGAIASLSSTNSRTS*LLLLGY
Trigger: ATACCCCAGCAAAAGCAACCAGGAAGTTCTGGAGTT...CGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp AACATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATGGTGGTAGGCAGAGGTaGTGGGGCAGCTGGGCTGCG +
Preference number: 4 (lower is better)
Translates to: NMHKNLMQPHLGLVFITHGGRQR*WGSWAA
Trigger: CGCAGCCCAGCTGCCCCACCACCTCTGCCTACCACC...ATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCATGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp ACATCCGGGTCCTGGGTGCAGTATTCAATCCTCTCCAAAATGATGGCAAAGTTGGGTTCCACAAGCTGGTaGGCTTGTTTCTGGATCCGT +
Preference number: 4 (lower is better)
Translates to: TSGSWVQYSILSKMMAKLGSTSW*ACFWIR
Trigger: ACGGATCCAGAAACAAGCCCACCAGCTTGTGGAACC...CAACTTTGCCATCATTTTGGAGAGGATTGAATACTGCACCCAGGACCCGGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431873.6
CDS-3UTR CCA 90 bp GGCACTTTCTCTTCCTCTTCCACAAGTGGACCATATTCTATCGGCAAAGCGGTGGTACCTCCTTCATATTaGCAGTCAGCGAAGAGGGCT +
Preference number: 4 (lower is better)
Translates to: GTFSSSSTSGPYSIGKAVVPPSY*QSAKRA
Trigger: AGCCCTCTTCGCTGACTGCCAATATGAAGGAGGTAC...CACCGCTTTGCCGATAGAATATGGTCCACTTGTGGAAGAGGAAGAGAAAGTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431873.6
CDS-3UTR CCA 90 bp ACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCGCTCAGGGCCCAGGCTaGTTCATGCTATTCTTGCTT +
Preference number: 4 (lower is better)
Translates to: TKRDIWSLVCEGAIASLSAQGPG*FMLFLL
Trigger: AAGCAAGAATAGCATGAACCAGCCTGGGCCCTGAGC...GGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp CTCTCCTCCACGGTCTTAGGGATCCCAAGGAAGAGAAGTGAGTGTGCGACCGAGACAAAACGTGACATTTaGTCTCTGGTTTGTGAAGGA +
Preference number: 4 (lower is better)
Translates to: LSSTVLGIPRKRSECATETKRDI*SLVCEG
Trigger: TCCTTCACAAACCAGAGACCAAATGTCACGTTTTGT...CTCGGTCGCACACTCACTTCTCTTCCTTGGGATCCCTAAGACCGTGGAGGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp CGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCACGAGAGTCATGTTAGTCTaGTTCCTCCAAGAAGCAGAC +
Preference number: 4 (lower is better)
Translates to: RDIWSLVCEGAIASLSSTRVMLV*FLQEAD
Trigger: GTCTGCTTCTTGGAGGAACCAGACTAACATGACTCT...CGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642122.1
CDS-3UTR CCA 90 bp CAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTTACAGGAAGCCTCCCTaGATCTCCATATCCTCCCCT +
Preference number: 4 (lower is better)
Translates to: QNVTFGLWFVKEPLPLSPYRKPP*ISISSP
Trigger: AGGGGAGGATATGGAGATCCAGGGAGGCTTCCTGTA...AGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642122.1
CDS-3UTR CCA 90 bp ACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCGCGGTACACTGCAGGTaGGTGGTCAGCTGCAACATG +
Preference number: 4 (lower is better)
Translates to: TKQNVTFGLWFVKEPLPLAVHCR*VVSCNM
Trigger: CATGTTGCAGCTGACCACCCACCTGCAGTGTACCGC...GAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642122.1
CDS-3UTR TCA 90 bp AACATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATCTGAACTTCTGGGCGTaGATCCCAGCCCCCGCGCTG +
Preference number: 4 (lower is better)
Translates to: NMHKNLMQPHLGLVFITHLNFWA*IPAPAL
Trigger: CAGCGCGGGGGCTGGGATTCACGCCCAGAAGTTCAG...ATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCATGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS-3UTR TCA 90 bp ACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCCTTTCAGGGTCCATGTaGCATTCGTCTACCTCACAG +
Preference number: 4 (lower is better)
Translates to: TKRDIWSLVCEGAIASLSLSGSM*HSSTSQ
Trigger: CTGTGAGGTAGACGAATGTCACATGGACCCTGAAAG...GGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
CDS-3UTR TCA 90 bp AGGCACTTTCTCTTCCTCTTCCACAAGTGGACCATATTCTATCGGCAAAGCGGTCTTTCAGGGTCCATGTaGCATTCGTCTACCTCACAG +
Preference number: 4 (lower is better)
Translates to: RHFLFLFHKWTIFYRQSGLSGSM*HSSTSQ
Trigger: CTGTGAGGTAGACGAATGTCACATGGACCCTGAAAG...ACCGCTTTGCCGATAGAATATGGTCCACTTGTGGAAGAGGAAGAGAAAGTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431873.6
CDS-3UTR TCA 90 bp TGGCACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCGGAAGTGACGTAGCCTaGACAGAGGTACCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: WHKTKRDIWSLVCEGAIAGSDVA*TEVPPS
Trigger: TGAAGGAGGTACCTCTGTTCAGGCTACGTCACTTCC...GGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR TCA 90 bp AGGCACTTTCTCTTCCTCTTCCACAAGTGGACCATATTCTATCGGCAAAGCGGTGCTGGTAGCCGTAATTaGCATTCCCACAAGGGAAGT +
Preference number: 4 (lower is better)
Translates to: RHFLFLFHKWTIFYRQSGAGSRN*HSHKGS
Trigger: ACTTCCCTTGTGGGAATGTCAATTACGGCTACCAGC...ACCGCTTTGCCGATAGAATATGGTCCACTTGTGGAAGAGGAAGAGAAAGTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431873.6
CDS-3UTR TCA 90 bp ACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTTGGTCTCTGGTTTGTaGAGGAGCCATTGCCTCTCT +
Preference number: 4 (lower is better)
Translates to: TKRDIWSLVCEGAIASLSLVSGL*RSHCLS
Trigger: AGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAA...GGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR GCA 90 bp AACATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATGGGCGCCCGAAATCTTaGCGCCCCCTCCTCACCCAT +
Preference number: 4 (lower is better)
Translates to: NMHKNLMQPHLGLVFITHGRPKS*RPLLTH
Trigger: ATGGGTGAGGAGGGGGCGGCAAGATTTCGGGCGCCC...ATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCATGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS-3UTR GCA 90 bp TGGCACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCCCAGACCATATCGGCTaGGATGAGACAGGAAAGGGA +
Preference number: 4 (lower is better)
Translates to: WHKTKRDIWSLVCEGAIAPDHIG*DETGKG
Trigger: TCCCTTTCCTGTCTCATCGCAGCCGATATGGTCTGG...GGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR GCA 90 bp TGGCACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCGGCAAAGAAGTCCACTaGAGACAAGCTGCGGTTTCC +
Preference number: 4 (lower is better)
Translates to: WHKTKRDIWSLVCEGAIAGKEVH*RQAAVS
Trigger: GGAAACCGCAGCTTGTCTGCAGTGGACTTCTTTGCC...GGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR GCA 90 bp AACATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATGCCACCACCTCCGGCTaGAATGATCAGGGGCACCGG +
Preference number: 4 (lower is better)
Translates to: NMHKNLMQPHLGLVFITHATTSG*NDQGHR
Trigger: CCGGTGCCCCTGATCATTGCAGCCGGAGGTGGTGGC...ATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCATGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR GCA 90 bp ATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATTTTTGGCCCCGTAGGCCCTaGCACCACCTCCGGCTGCAA +
Preference number: 4 (lower is better)
Translates to: MHKNLMQPHLGLVFITHFWPRRP*HHLRLQ
Trigger: TTGCAGCCGGAGGTGGTGGCAGGGCCTACGGGGCCA...AAAATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR GCA 90 bp TCCCATAGCAGCACTCCAAAGGACCATGTGTCTGTTTTAGAAGTGAATATTCCTGTCTTCACAGCCACTTaGAGGGGGCTTGGGTCGTTG +
Preference number: 4 (lower is better)
Translates to: SHSSTPKDHVSVLEVNIPVFTAT*RGLGSL
Trigger: CAACGACCCAAGCCCCCTGCAAGTGGCTGTGAAGAC...AGGAATATTCACTTCTAAAACAGACACATGGTCCTTTGGAGTGCTGCTATGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000431873.6
CDS-3UTR GCA 90 bp AGGCACTTTCTCTTCCTCTTCCACAAGTGGACCATATTCTATCGGCAAAGCGGTCCAGAACTTCCTGGTTaGTTTTGCTGGGGTATGGCA +
Preference number: 4 (lower is better)
Translates to: RHFLFLFHKWTIFYRQSGPELPG*FCWGMA
Trigger: TGCCATACCCCAGCAAAAGCAACCAGGAAGTTCTGG...ACCGCTTTGCCGATAGAATATGGTCCACTTGTGGAAGAGGAAGAGAAAGTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431873.6
CDS-3UTR GCA 90 bp CAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTGTTGGACTGAGAGAATaGCATATTCACGTGTCCCCC +
Preference number: 4 (lower is better)
Translates to: QNVTFGLWFVKEPLPLSPVGLRE*HIHVSP
Trigger: GGGGGACACGTGAATATGGCATTCTCTCAGTCCAAC...AGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp ACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCCACGGACTCAGGATaGTGTGCTTGGAGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: TKQNVTFGLWFVKEPLPLSTDSG*CAWSQL
Trigger: CAGCTGACTCCAAGCACACCATCCTGAGTCCGTGGA...GAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CCA 90 bp AAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCCCAACCATGCTTCCCTaGAGTGGGCATCAGGAGGAT +
Preference number: 4 (lower is better)
Translates to: KTKRDIWSLVCEGAIASLPTMLP*SGHQED
Trigger: ATCCTCCTGATGCCCACTCCAGGGAAGCATGGTTGG...GAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CCA 90 bp AAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCGGCCATCTTGGAGCCTaGGGATGTTCCTTCACTGCA +
Preference number: 4 (lower is better)
Translates to: KTKRDIWSLVCEGAIASLGHLGA*GCSFTA
Trigger: TGCAGTGAAGGAACATCCCCAGGCTCCAAGATGGCC...GAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CCA 90 bp AAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCCCTCCACGCTCAGGTTaGAGTTCTGGTAGGCGTTGT +
Preference number: 4 (lower is better)
Translates to: KTKRDIWSLVCEGAIASLPPRSG*SSGRRC
Trigger: ACAACGCCTACCAGAACTCCAACCTGAGCGTGGAGG...GAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CCA 90 bp ACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTGCTGTAGGTGTCGGTaGCTGGCACCTTCCAGATCT +
Preference number: 4 (lower is better)
Translates to: TKQNVTFGLWFVKEPLPLCCRCR*LAPSRS
Trigger: AGATCTGGAAGGTGCCAGCCACCGACACCTACAGCA...GAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CCA 90 bp AAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCAGTCTCTCTGGGTaGAACGTGTCTGTCTTGGCC +
Preference number: 4 (lower is better)
Translates to: KTKRDIWSLVCEGAIASLSSLSG*NVSVLA
Trigger: GGCCAAGACAGACACGTTCCACCCAGAGAGACTGGA...GAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CCA 90 bp TGGGAGGAACAGGATACAAAGTTACATTTTCAGCAGCTACAATGTATAAAGGCATCCCCAAAGGCGCCATaGCCCAGACCCCGAATGAGG +
Preference number: 4 (lower is better)
Translates to: WEEQDTKLHFQQLQCIKASPKAP*PRPRMR
Trigger: CCTCATTCGGGGTCTGGGCCATGGCGCCTTTGGGGA...TGCCTTTATACATTGTAGCTGCTGAAAATGTAACTTTGTATCCTGTTCCTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000453137.1
CDS-3UTR CCA 90 bp AACATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATGGGGGCTTGGGTCGTTaGGCATTCCGGACACCTGGC +
Preference number: 4 (lower is better)
Translates to: NMHKNLMQPHLGLVFITHGGLGR*AFRTPG
Trigger: GCCAGGTGTCCGGAATGCCCAACGACCCAAGCCCCC...ATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCATGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp AACATAGAAGCAGCTAATTCTGACTACATTGAAGCAGAGCACACACAATTTGAAGGGGGCTTGGGTCGTTaGGCATTCCGGACACCTGGC +
Preference number: 4 (lower is better)
Translates to: NIEAANSDYIEAEHTQFEGGLGR*AFRTPG
Trigger: GCCAGGTGTCCGGAATGCCCAACGACCCAAGCCCCC...TTCAAATTGTGTGTGCTCTGCTTCAATGTAGTCAGAATTAGCTGCTTCTATGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp CTGGGAGGAACAGGATACAAAGTTACATTTTCAGCAGCTACAATGTATAAAGGCCACTTGCAGGGGGCTTaGGTCGTTGGGCATTCCGGA +
Preference number: 4 (lower is better)
Translates to: LGGTGYKVTFSAATMYKGHLQGA*VVGHSG
Trigger: TCCGGAATGCCCAACGACCCAAGCCCCCTGCAAGTG...GCCTTTATACATTGTAGCTGCTGAAAATGTAACTTTGTATCCTGTTCCTCCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453137.1
CDS-3UTR CCA 90 bp GACTCGAACAGAGATCTCTGCAGCTGTGGGTTTCTTTGCAGCCTTGCCAGAGGACAGCGAACAATGTTCTaGTGGTTGAATTTGCTGATG +
Preference number: 4 (lower is better)
Translates to: DSNRDLCSCGFLCSLARGQRTMF*WLNLLM
Trigger: CATCAGCAAATTCAACCACCAGAACATTGTTCGCTG...TCCTCTGGCAAGGCTGCAAAGAAACCCACAGCTGCAGAGATCTCTGTTCGAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431873.6
CDS-3UTR CCA 90 bp AACATAGAAGCAGCTAATTCTGACTACATTGAAGCAGAGCACACACAATTTGAAGCAGAAGGTCCAGCATaGCCAGGGAGGAGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: NIEAANSDYIEAEHTQFEAEGPA*PGRRAG
Trigger: GCCAGCCCTCCTCCCTGGCCATGCTGGACCTTCTGC...TTCAAATTGTGTGTGCTCTGCTTCAATGTAGTCAGAATTAGCTGCTTCTATGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp ACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCCACTCTTCCAGGGCCTaGACAGGTCAAGAGGCAGTT +
Preference number: 4 (lower is better)
Translates to: TKQNVTFGLWFVKEPLPLHSSRA*TGQEAV
Trigger: AACTGCCTCTTGACCTGTCCAGGCCCTGGAAGAGTG...GAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp GCCATTGCCTCTCTCTCCTCCACGGTCTTAGGGATCCCAAGGAAGAGAAGTGAGGCTTTTGCTGGGGTATaGCATATATCCAAGAGAAAA +
Preference number: 4 (lower is better)
Translates to: AIASLSSTVLGIPRKRSEAFAGV*HISKRK
Trigger: TTTTCTCTTGGATATATGCCATACCCCAGCAAAAGC...CTCACTTCTCTTCCTTGGGATCCCTAAGACCGTGGAGGAGAGAGAGGCAATGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp CGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCACGTTCCTCTTCCACAAGTaGACCATATTCTATCGGCAA +
Preference number: 4 (lower is better)
Translates to: RDIWSLVCEGAIASLSSTFLFHK*TIFYRQ
Trigger: TTGCCGATAGAATATGGTCCACTTGTGGAAGAGGAA...CGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp CAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTAGATCTCTGCAGCTGTaGGTTTCTTTGCAGCCTTGC +
Preference number: 4 (lower is better)
Translates to: QNVTFGLWFVKEPLPLSPRSLQL*VSLQPC
Trigger: GCAAGGCTGCAAAGAAACCCACAGCTGCAGAGATCT...AGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp TGGCACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCGGTTCCACAAGCTGGTaGGCTTGTTTCTGGATCCGT +
Preference number: 4 (lower is better)
Translates to: WHKTKRDIWSLVCEGAIAGSTSW*ACFWIR
Trigger: ACGGATCCAGAAACAAGCCCACCAGCTTGTGGAACC...GGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp CAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTGTTACCCCTGTCGTGTaGCTCCTTCTTTGCTATAGG +
Preference number: 4 (lower is better)
Translates to: QNVTFGLWFVKEPLPLSPVTPVV*LLLCYR
Trigger: CCTATAGCAAAGAAGGAGCCACACGACAGGGGTAAC...AGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp ACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCAGTTGCAACGTTAGGTaGGACAGTACAGCTTCCCTC +
Preference number: 4 (lower is better)
Translates to: TKRDIWSLVCEGAIASLSSCNVR*DSTASL
Trigger: GAGGGAAGCTGTACTGTCCCACCTAACGTTGCAACT...GGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp TGGCACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCGCTCAGGGCCCAGGCTaGTTCATGCTATTCTTGCTT +
Preference number: 4 (lower is better)
Translates to: WHKTKRDIWSLVCEGAIAAQGPG*FMLFLL
Trigger: AAGCAAGAATAGCATGAACCAGCCTGGGCCCTGAGC...GGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp TGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCACGGTCTTAGGGTTATGCAACCACATCTaGGCCTTGTATTTATCACTC +
Preference number: 4 (lower is better)
Translates to: WSLVCEGAIASLSSTVLGLCNHI*ALYLSL
Trigger: GAGTGATAAATACAAGGCCCAGATGTGGTTGCATAA...CCCTAAGACCGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
3UTR CAA 72 bp TCCACAAGTGGACCATATTCTATCGGCAAAGCGGTGTaGATTACATCCGGGTCCTGGGTGCAGTATTCAATC +
Preference number: 4 (lower is better)
Translates to: STSGPYSIGKAV*ITSGSWVQYSI
Trigger: GATTGAATACTGCACCCAGGACCCGGATGTAATCAACACCGCTTTGCCGATAGAATATGGTCCACTTGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431873.6
CDS-3UTR TCA 90 bp ACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCGGTAGCAGTCCAGGCTaGTGGAGATATTGTCAAAAG +
Preference number: 4 (lower is better)
Translates to: TKRDIWSLVCEGAIASLSGSSPG*WRYCQK
Trigger: CTTTTGACAATATCTCCATCAGCCTGGACTGCTACC...GGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR TCA 90 bp AAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCGGTCACAGAAGCAGATaGCCTTGTGGCTTTCAGGGT +
Preference number: 4 (lower is better)
Translates to: KTKRDIWSLVCEGAIASLGHRSR*PCGFQG
Trigger: ACCCTGAAAGCCACAAGGTCATCTGCTTCTGTGACC...GAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
CDS-3UTR TCA 90 bp CAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTTTTTCCTCCAAATACTaGCAGCCACAGGCAATGTCC +
Preference number: 4 (lower is better)
Translates to: QNVTFGLWFVKEPLPLSPFSSKY*QPQAMS
Trigger: GGACATTGCCTGTGGCTGTCAGTATTTGGAGGAAAA...AGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR GCA 90 bp AAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCCACCACGAAGTCAACTaGCAGACTCTTCCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: KTKRDIWSLVCEGAIASLHHEVN*QTLPLQ
Trigger: CTGCAGAGGAAGAGTCTGGCAGTTGACTTCGTGGTG...GAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS-3UTR GCA 90 bp AAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCAGGGGAAGTCAAAGCTaGACTCCAGACCATATCGGC +
Preference number: 4 (lower is better)
Translates to: KTKRDIWSLVCEGAIASLRGSQS*TPDHIG
Trigger: GCCGATATGGTCTGGAGTGCAGCTTTGACTTCCCCT...GAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR GCA 90 bp ACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTGGTTCCTGAGGTCATaGAGTGGAGGGGAATACTCC +
Preference number: 4 (lower is better)
Translates to: TKQNVTFGLWFVKEPLPLWFLRS*SGGEYS
Trigger: GGAGTATTCCCCTCCACTGCATGACCTCAGGAACCA...GAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR GCA 90 bp ACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCGGCAAAGAAGTCCACTaGAGACAAGCTGCGGTTTCC +
Preference number: 4 (lower is better)
Translates to: TKQNVTFGLWFVKEPLPLGKEVH*RQAAVS
Trigger: GGAAACCGCAGCTTGTCTGCAGTGGACTTCTTTGCC...GAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR GCA 90 bp TGGCACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCAGAGCTCTTGATCGGTaGAGGAAACGTAGCACTGGT +
Preference number: 4 (lower is better)
Translates to: WHKTKRDIWSLVCEGAIARALDR*RKRSTG
Trigger: ACCAGTGCTACGTTTCCTGCACCGATCAAGAGCTCT...GGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR GCA 90 bp TGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCACGGTCTTAGGGCATTGTTCTCTCCAATaGAGACTTTCTGGATTAACT +
Preference number: 4 (lower is better)
Translates to: WSLVCEGAIASLSSTVLGHCSLQ*RLSGLT
Trigger: AGTTAATCCAGAAAGTCTGCATTGGAGAGAACAATG...CCCTAAGACCGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR GCA 90 bp AACATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATGCCACCTCCACCACCTaGGGCTCCGGAATTGCCGTT +
Preference number: 4 (lower is better)
Translates to: NMHKNLMQPHLGLVFITHATSTT*GSGIAV
Trigger: AACGGCAATTCCGGAGCCGCAGGTGGTGGAGGTGGC...ATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCATGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR GCA 90 bp ACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTTGTACTCAGGGCTCTaGAGCTCCATCTGCATGGCT +
Preference number: 4 (lower is better)
Translates to: TKQNVTFGLWFVKEPLPLLYSGL*SSICMA
Trigger: AGCCATGCAGATGGAGCTGCAGAGCCCTGAGTACAA...GAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR GCA 90 bp ACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCGCAGGCTCACCCCAATaGAGCGAACAATGTTCTGGT +
Preference number: 4 (lower is better)
Translates to: TKQNVTFGLWFVKEPLPLAGSPQ*SEQCSG
Trigger: ACCAGAACATTGTTCGCTGCATTGGGGTGAGCCTGC...GAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR GCA 90 bp AAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCGCAGGCTCACCCCAATaGAGCGAACAATGTTCTGGT +
Preference number: 4 (lower is better)
Translates to: KTKRDIWSLVCEGAIASLAGSPQ*SEQCSG
Trigger: ACCAGAACATTGTTCGCTGCATTGGGGTGAGCCTGC...GAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR GCA 90 bp CAGCCCCAGGTTACCCCTGTCGTGTGGCTCCTTCTTTGCTATAGGATTATTCTTCTTCCTGGTTGCTTTTaGTGGGGTATGGCATATATC +
Preference number: 4 (lower is better)
Translates to: QPQVTPVVWLLLCYRIILLPGCF*WGMAYI
Trigger: GATATATGCCATACCCCAGCAAAAGCAACCAGGAAG...AAGAATAATCCTATAGCAAAGAAGGAGCCACACGACAGGGGTAACCTGGGGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000431873.6
CDS-3UTR GCA 90 bp ACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCCATCCGGGTCCTGGGTaGAGTATTCAATCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: TKQNVTFGLWFVKEPLPLHPGPG*SIQSSP
Trigger: TGGAGAGGATTGAATACTGCACCCAGGACCCGGATG...GAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR GCA 90 bp ACATCCGGGTCCTGGGTGCAGTATTCAATCCTCTCCAAAATGATGGCAAAGTTGTCGAACAGAGATCTCTaGAGCTGTGGGTTTCTTTGC +
Preference number: 4 (lower is better)
Translates to: TSGSWVQYSILSKMMAKLSNRDL*SCGFLC
Trigger: GCAAAGAAACCCACAGCTGCAGAGATCTCTGTTCGA...CAACTTTGCCATCATTTTGGAGAGGATTGAATACTGCACCCAGGACCCGGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431873.6
CDS-3UTR GCA 90 bp ACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCCGGAAGTCTCCCAGTTaGAACGTTAGGTGGGACAGT +
Preference number: 4 (lower is better)
Translates to: TKQNVTFGLWFVKEPLPLRKSPS*NVRWDS
Trigger: ACTGTCCCACCTAACGTTGCAACTGGGAGACTTCCG...GAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR GCA 90 bp AACATAGAAGCAGCTAATTCTGACTACATTGAAGCAGAGCACACACAATTTGAACTTCCGGCGGTACACTaGAGGTGGGTGGTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: NIEAANSDYIEAEHTQFELPAVH*RWVVSC
Trigger: GCAGCTGACCACCCACCTGCAGTGTACCGCCGGAAG...TTCAAATTGTGTGTGCTCTGCTTCAATGTAGTCAGAATTAGCTGCTTCTATGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642122.1
CDS-3UTR CCA 90 bp AACATAGAAGCAGCTAATTCTGACTACATTGAAGCAGAGCACACACAATTTGAACCCTGGGCACAGTCCTaGTGGAAGTCACAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: NIEAANSDYIEAEHTQFEPWAQS*WKSQAC
Trigger: GCAGGCCTGTGACTTCCACCAGGACTGTGCCCAGGG...TTCAAATTGTGTGTGCTCTGCTTCAATGTAGTCAGAATTAGCTGCTTCTATGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CCA 90 bp TGGCACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCCTGAGCAATAGAGCATaGTCTTGGTGGTCCTGGAAC +
Preference number: 4 (lower is better)
Translates to: WHKTKRDIWSLVCEGAIALSNRA*SWWSWN
Trigger: GTTCCAGGACCACCAAGACCATGCTCTATTGCTCAG...GGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CCA 90 bp ATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATTTTGCAGAAGGTCCAGCATaGCCAGGGAGGAGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: MHKNLMQPHLGLVFITHFAEGPA*PGRRAG
Trigger: GCCAGCCCTCCTCCCTGGCCATGCTGGACCTTCTGC...AAAATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp TGGCACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCAAGAGGCAGTTTCTaGCAGCAATGTCTCGGTGGA +
Preference number: 4 (lower is better)
Translates to: WHKTKRDIWSLVCEGAIASRGSF*QQCLGG
Trigger: TCCACCGAGACATTGCTGCCAGAAACTGCCTCTTGA...GGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp CAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTATTACATCCGGGTCCTaGGTGCAGTATTCAATCCTC +
Preference number: 4 (lower is better)
Translates to: QNVTFGLWFVKEPLPLSPITSGS*VQYSIL
Trigger: GAGGATTGAATACTGCACCCAGGACCCGGATGTAAT...AGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp CAGCGAACAATGTTCTGGTGGTTGAATTTGCTGATGATCAGGGCTTCCATGAGGATTACATCCGGGTCCTaGGTGCAGTATTCAATCCTC +
Preference number: 4 (lower is better)
Translates to: QRTMFWWLNLLMIRASMRITSGS*VQYSIL
Trigger: GAGGATTGAATACTGCACCCAGGACCCGGATGTAAT...CCTCATGGAAGCCCTGATCATCAGCAAATTCAACCACCAGAACATTGTTCGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431873.6
CDS-3UTR CCA 90 bp TGGCACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCAGATCTCTGCAGCTGTaGGTTTCTTTGCAGCCTTGC +
Preference number: 4 (lower is better)
Translates to: WHKTKRDIWSLVCEGAIARSLQL*VSLQPC
Trigger: GCAAGGCTGCAAAGAAACCCACAGCTGCAGAGATCT...GGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp ACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCACTCCGAAGGAGGGTTaGACTGAGAGAATGCCATAT +
Preference number: 4 (lower is better)
Translates to: TKRDIWSLVCEGAIASLSTPKEG*TERMPY
Trigger: ATATGGCATTCTCTCAGTCCAACCCTCCTTCGGAGT...GGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp AAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTGGTGGGCTTGTTTCTaGATCCGTGGACCTTGTGCA +
Preference number: 4 (lower is better)
Translates to: KTKRDIWSLVCEGAIASLWWACF*IRGPCA
Trigger: TGCACAAGGTCCACGGATCCAGAAACAAGCCCACCA...GAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp ACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCGGTTCCACAAGCTGGTaGGCTTGTTTCTGGATCCGT +
Preference number: 4 (lower is better)
Translates to: TKQNVTFGLWFVKEPLPLGSTSW*ACFWIR
Trigger: ACGGATCCAGAAACAAGCCCACCAGCTTGTGGAACC...GAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp TGGCACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCGTACCTCCTTCATATTaGCAGTCAGCGAAGAGGGCT +
Preference number: 4 (lower is better)
Translates to: WHKTKRDIWSLVCEGAIAVPPSY*QSAKRA
Trigger: AGCCCTCTTCGCTGACTGCCAATATGAAGGAGGTAC...GGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp CGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCACGTCTTGCTTTTCAGAATaGTATCCTCGTAATGACCAG +
Preference number: 4 (lower is better)
Translates to: RDIWSLVCEGAIASLSSTSCFSE*YPRNDQ
Trigger: CTGGTCATTACGAGGATACCATTCTGAAAAGCAAGA...CGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp GACTCGAACAGAGATCTCTGCAGCTGTGGGTTTCTTTGCAGCCTTGCCAGAGGAACAAAACGTGACATTTaGTCTCTGGTTTGTGAAGGA +
Preference number: 4 (lower is better)
Translates to: DSNRDLCSCGFLCSLARGTKRDI*SLVCEG
Trigger: TCCTTCACAAACCAGAGACCAAATGTCACGTTTTGT...TCCTCTGGCAAGGCTGCAAAGAAACCCACAGCTGCAGAGATCTCTGTTCGAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431873.6
CDS-3UTR TCA 90 bp TGGCACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCCAATCCTCTCCAAAATaGTGGCAAAGTTGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: WHKTKRDIWSLVCEGAIAQSSPK*WQSWAC
Trigger: ACAGGCCCAACTTTGCCATCATTTTGGAGAGGATTG...GGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR TCA 90 bp ACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCGAAGGAGGGTTGGACTaGGAGAATGCCATATTCACG +
Preference number: 4 (lower is better)
Translates to: TKQNVTFGLWFVKEPLPLEGGLD*ENAIFT
Trigger: CGTGAATATGGCATTCTCTCAGTCCAACCCTCCTTC...GAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR TCA 90 bp AAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCGAAGGAGGGTTGGACTaGGAGAATGCCATATTCACG +
Preference number: 4 (lower is better)
Translates to: KTKRDIWSLVCEGAIASLEGGLD*ENAIFT
Trigger: CGTGAATATGGCATTCTCTCAGTCCAACCCTCCTTC...GAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR TCA 90 bp ACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTTGGTCTCTGGTTTGTaGAGGAGCCATTGCCTCTCT +
Preference number: 4 (lower is better)
Translates to: TKQNVTFGLWFVKEPLPLLVSGL*RSHCLS
Trigger: AGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAA...GAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR GCA 90 bp AACATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATCCGGTGGCACCCTCCTaGAAAGATTTTCCGGCCCAG +
Preference number: 4 (lower is better)
Translates to: NMHKNLMQPHLGLVFITHPVAPS*KDFPAQ
Trigger: CTGGGCCGGAAAATCTTTGCAGGAGGGTGCCACCGG...ATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCATGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR GCA 90 bp TGGGAGGAACAGGATACAAAGTTACATTTTCAGCAGCTACAATGTATAAAGGCAGTCTTCACAGCCACTTaGAGGGGGCTTGGGTCGTTG +
Preference number: 4 (lower is better)
Translates to: WEEQDTKLHFQQLQCIKAVFTAT*RGLGSL
Trigger: CAACGACCCAAGCCCCCTGCAAGTGGCTGTGAAGAC...TGCCTTTATACATTGTAGCTGCTGAAAATGTAACTTTGTATCCTGTTCCTCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453137.1
CDS-3UTR GCA 90 bp AACATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATATGTCCCGAGCCACGTaGAGAAGGTCCAGCATGGCC +
Preference number: 4 (lower is better)
Translates to: NMHKNLMQPHLGLVFITHMSRAT*RRSSMA
Trigger: GGCCATGCTGGACCTTCTGCACGTGGCTCGGGACAT...ATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCATGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR GCA 90 bp ACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCGTTGGACTGAGAGAATaGCATATTCACGTGTCCCCC +
Preference number: 4 (lower is better)
Translates to: TKQNVTFGLWFVKEPLPLVGLRE*HIHVSP
Trigger: GGGGGACACGTGAATATGGCATTCTCTCAGTCCAAC...GAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR GCA 90 bp AAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCGTTGGACTGAGAGAATaGCATATTCACGTGTCCCCC +
Preference number: 4 (lower is better)
Translates to: KTKRDIWSLVCEGAIASLVGLRE*HIHVSP
Trigger: GGGGGACACGTGAATATGGCATTCTCTCAGTCCAAC...GAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp TGGCACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCACTTTCTGGATTAACTaGTTTGTACTGGGGCAGGCG +
Preference number: 4 (lower is better)
Translates to: WHKTKRDIWSLVCEGAIATFWIN*FVLGQA
Trigger: CGCCTGCCCCAGTACAAACCAGTTAATCCAGAAAGT...GGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CCA 90 bp TGGCACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCATTCTCCAGTCTCTCTaGGTGGAACGTGTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: WHKTKRDIWSLVCEGAIAILQSL*VERVCL
Trigger: AAGACAGACACGTTCCACCCAGAGAGACTGGAGAAT...GGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CCA 90 bp AACATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATGCCAGCACCGTCCCGTaGTCACAGAAGCAGATGACC +
Preference number: 4 (lower is better)
Translates to: NMHKNLMQPHLGLVFITHASTVP*SQKQMT
Trigger: GGTCATCTGCTTCTGTGACCACGGGACGGTGCTGGC...ATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCATGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
CDS-3UTR CCA 90 bp AACATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATCACTTGCAGGGGGCTTaGGTCGTTGGGCATTCCGGA +
Preference number: 4 (lower is better)
Translates to: NMHKNLMQPHLGLVFITHHLQGA*VVGHSG
Trigger: TCCGGAATGCCCAACGACCCAAGCCCCCTGCAAGTG...ATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCATGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp ACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCAAGAGGCAGTTTCTaGCAGCAATGTCTCGGTGGA +
Preference number: 4 (lower is better)
Translates to: TKQNVTFGLWFVKEPLPLSRGSF*QQCLGG
Trigger: TCCACCGAGACATTGCTGCCAGAAACTGCCTCTTGA...GAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp ACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCCCTGGTTGCTTTTGCTaGGGTATGGCATATATCCAA +
Preference number: 4 (lower is better)
Translates to: TKRDIWSLVCEGAIASLSPGCFC*GMAYIQ
Trigger: TTGGATATATGCCATACCCCAGCAAAAGCAACCAGG...GGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp ACATCCGGGTCCTGGGTGCAGTATTCAATCCTCTCCAAAATGATGGCAAAGTTGAACTCCAGAACTTCCTaGTTGCTTTTGCTGGGGTAT +
Preference number: 4 (lower is better)
Translates to: TSGSWVQYSILSKMMAKLNSRTS*LLLLGY
Trigger: ATACCCCAGCAAAAGCAACCAGGAAGTTCTGGAGTT...CAACTTTGCCATCATTTTGGAGAGGATTGAATACTGCACCCAGGACCCGGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000431873.6
CDS-3UTR CCA 90 bp ACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCAACTCCAGAACTTCCTaGTTGCTTTTGCTGGGGTAT +
Preference number: 4 (lower is better)
Translates to: TKRDIWSLVCEGAIASLSNSRTS*LLLLGY
Trigger: ATACCCCAGCAAAAGCAACCAGGAAGTTCTGGAGTT...GGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp AACATAGAAGCAGCTAATTCTGACTACATTGAAGCAGAGCACACACAATTTGAAAGGGCAGTTCTTGGGTaGGTCCATCCGGCCTCCACT +
Preference number: 4 (lower is better)
Translates to: NIEAANSDYIEAEHTQFERAVLG*VHPAST
Trigger: AGTGGAGGCCGGATGGACCCACCCAAGAACTGCCCT...TTCAAATTGTGTGTGCTCTGCTTCAATGTAGTCAGAATTAGCTGCTTCTATGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp AACATAGAAGCAGCTAATTCTGACTACATTGAAGCAGAGCACACACAATTTGAACCCCCTCAGGGTCCTTaGGCCTCACAGGCACTTTCT +
Preference number: 4 (lower is better)
Translates to: NIEAANSDYIEAEHTQFEPPQGP*ASQALS
Trigger: AGAAAGTGCCTGTGAGGCCCAAGGACCCTGAGGGGG...TTCAAATTGTGTGTGCTCTGCTTCAATGTAGTCAGAATTAGCTGCTTCTATGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp AACATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATCCCCCTCAGGGTCCTTaGGCCTCACAGGCACTTTCT +
Preference number: 4 (lower is better)
Translates to: NMHKNLMQPHLGLVFITHPPQGP*ASQALS
Trigger: AGAAAGTGCCTGTGAGGCCCAAGGACCCTGAGGGGG...ATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCATGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp TGGCACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCACTCCGAAGGAGGGTTaGACTGAGAGAATGCCATAT +
Preference number: 4 (lower is better)
Translates to: WHKTKRDIWSLVCEGAIATPKEG*TERMPY
Trigger: ATATGGCATTCTCTCAGTCCAACCCTCCTTCGGAGT...GGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp ACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTTGGGTTCCACAAGCTaGTGGGCTTGTTTCTGGATC +
Preference number: 4 (lower is better)
Translates to: TKQNVTFGLWFVKEPLPLLGSTS*WACFWI
Trigger: GATCCAGAAACAAGCCCACCAGCTTGTGGAACCCAA...GAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp ACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCGTGACATTTGGTCTCTaGTTTGTGAAGGAGCCATTG +
Preference number: 4 (lower is better)
Translates to: TKRDIWSLVCEGAIASLSVTFGL*FVKEPL
Trigger: CAATGGCTCCTTCACAAACCAGAGACCAAATGTCAC...GGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp AAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCCCCTCTCCCCTCAAATaGCTCATGTCCACATCAACA +
Preference number: 4 (lower is better)
Translates to: KTKRDIWSLVCEGAIASLPSPLK*LMSTST
Trigger: TGTTGATGTGGACATGAGCCATTTGAGGGGAGAGGG...GAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp ACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCCCCTCTCCCCTCAAATaGCTCATGTCCACATCAACA +
Preference number: 4 (lower is better)
Translates to: TKQNVTFGLWFVKEPLPLPSPLK*LMSTST
Trigger: TGTTGATGTGGACATGAGCCATTTGAGGGGAGAGGG...GAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp AACATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATTGGTCAGCTGCAACATaGCCTGGCAGCCTGGCCCTT +
Preference number: 4 (lower is better)
Translates to: NMHKNLMQPHLGLVFITHWSAAT*PGSLAL
Trigger: AAGGGCCAGGCTGCCAGGCCATGTTGCAGCTGACCA...ATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCATGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642122.1
CDS-3UTR TCA 90 bp AACATAGAAGCAGCTAATTCTGACTACATTGAAGCAGAGCACACACAATTTGAATTGAGGAGTGTGGGGTaGCAGTGTGCCTTGGGTCCA +
Preference number: 4 (lower is better)
Translates to: NIEAANSDYIEAEHTQFELRSVG*QCALGP
Trigger: TGGACCCAAGGCACACTGTCACCCCACACTCCTCAA...TTCAAATTGTGTGTGCTCTGCTTCAATGTAGTCAGAATTAGCTGCTTCTATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR TCA 90 bp AAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCGGACATCAGTGGTACTaGGCAATAGAGCATGGTCTT +
Preference number: 4 (lower is better)
Translates to: KTKRDIWSLVCEGAIASLGHQWY*AIEHGL
Trigger: AAGACCATGCTCTATTGCTCAGTACCACTGATGTCC...GAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR TCA 90 bp AACATAGAAGCAGCTAATTCTGACTACATTGAAGCAGAGCACACACAATTTGAACCTCCTTCAGGTCACTaGTGGAGGAGGTCTTGCCAG +
Preference number: 4 (lower is better)
Translates to: NIEAANSDYIEAEHTQFEPPSGH*WRRSCQ
Trigger: CTGGCAAGACCTCCTCCATCAGTGACCTGAAGGAGG...TTCAAATTGTGTGTGCTCTGCTTCAATGTAGTCAGAATTAGCTGCTTCTATGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR TCA 90 bp AACATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATCCTCCTTCAGGTCACTaGTGGAGGAGGTCTTGCCAG +
Preference number: 4 (lower is better)
Translates to: NMHKNLMQPHLGLVFITHPPSGH*WRRSCQ
Trigger: CTGGCAAGACCTCCTCCATCAGTGACCTGAAGGAGG...ATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCATGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR TCA 90 bp TGGCACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCCAATGTCTCGGTGGATaGAGTGGTTTTCCTCCAAAT +
Preference number: 4 (lower is better)
Translates to: WHKTKRDIWSLVCEGAIAQCLGG*SGFPPN
Trigger: ATTTGGAGGAAAACCACTTCATCCACCGAGACATTG...GGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR TCA 90 bp AAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCCAATCCTCTCCAAAATaGTGGCAAAGTTGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: KTKRDIWSLVCEGAIASLQSSPK*WQSWAC
Trigger: ACAGGCCCAACTTTGCCATCATTTTGGAGAGGATTG...GAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR TCA 90 bp AACATAGAAGCAGCTAATTCTGACTACATTGAAGCAGAGCACACACAATTTGAACCCAAGGAAGAGAAGTaGGTGTGCGACCGAGCTCAG +
Preference number: 4 (lower is better)
Translates to: NIEAANSDYIEAEHTQFEPKEEK*VCDRAQ
Trigger: CTGAGCTCGGTCGCACACTCACTTCTCTTCCTTGGG...TTCAAATTGTGTGTGCTCTGCTTCAATGTAGTCAGAATTAGCTGCTTCTATGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR TCA 90 bp ACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCGCACAAAACAAAACGTaGCATTTGGTCTCTGGTTTG +
Preference number: 4 (lower is better)
Translates to: TKRDIWSLVCEGAIASLSAQNKT*HLVSGL
Trigger: CAAACCAGAGACCAAATGTCACGTTTTGTTTTGTGC...GGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR TCA 90 bp ATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATTTTTGGCAGCCTGGCCCTTaGAGCACTACACAGGCCACT +
Preference number: 4 (lower is better)
Translates to: MHKNLMQPHLGLVFITHFWQPGP*STTQAT
Trigger: AGTGGCCTGTGTAGTGCTTCAAGGGCCAGGCTGCCA...AAAATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000642122.1
CDS-3UTR GCA 90 bp AACATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATGTGTGCAGTGCTCACTaGTGCTCCTCATCCACGGAC +
Preference number: 4 (lower is better)
Translates to: NMHKNLMQPHLGLVFITHVCSAH*CSSSTD
Trigger: GTCCGTGGATGAGGAGCAGCAGTGAGCACTGCACAC...ATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCATGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR GCA 90 bp ACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCGGGATGTTCCTTCACTaGAGTTCTTCAGGGCAAAGA +
Preference number: 4 (lower is better)
Translates to: TKQNVTFGLWFVKEPLPLGMFLH*SSSGQR
Trigger: TCTTTGCCCTGAAGAACTGCAGTGAAGGAACATCCC...GAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR GCA 90 bp ATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATTTTTCTGGTAGGCGTTGTTaGACTGTGCCTGGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: MHKNLMQPHLGLVFITHFSGRRC*TVPGWG
Trigger: GCCCCACCCAGGCACAGTGCAACAACGCCTACCAGA...AAAATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR GCA 90 bp AACATAGAAGCAGCTAATTCTGACTACATTGAAGCAGAGCACACACAATTTGAACTCTGCAGCTCCATCTaGATGGCTTGCAGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: NIEAANSDYIEAEHTQFELCSSI*MACSSW
Trigger: CCAGGAGCTGCAAGCCATGCAGATGGAGCTGCAGAG...TTCAAATTGTGTGTGCTCTGCTTCAATGTAGTCAGAATTAGCTGCTTCTATGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR GCA 90 bp AACATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATTCGAGGTGCGGAGCTTaGTCAGCTTGTACTCAGGGC +
Preference number: 4 (lower is better)
Translates to: NMHKNLMQPHLGLVFITHSRCGA*SACTQG
Trigger: GCCCTGAGTACAAGCTGAGCAAGCTCCGCACCTCGA...ATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCATGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR GCA 90 bp AACATAGAAGCAGCTAATTCTGACTACATTGAAGCAGAGCACACACAATTTGAATCGAGGTGCGGAGCTTaGTCAGCTTGTACTCAGGGC +
Preference number: 4 (lower is better)
Translates to: NIEAANSDYIEAEHTQFESRCGA*SACTQG
Trigger: GCCCTGAGTACAAGCTGAGCAAGCTCCGCACCTCGA...TTCAAATTGTGTGTGCTCTGCTTCAATGTAGTCAGAATTAGCTGCTTCTATGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR GCA 90 bp AACATAGAAGCAGCTAATTCTGACTACATTGAAGCAGAGCACACACAATTTGAAGTCTTCACAGCCACTTaGAGGGGGCTTGGGTCGTTG +
Preference number: 4 (lower is better)
Translates to: NIEAANSDYIEAEHTQFEVFTAT*RGLGSL
Trigger: CAACGACCCAAGCCCCCTGCAAGTGGCTGTGAAGAC...TTCAAATTGTGTGTGCTCTGCTTCAATGTAGTCAGAATTAGCTGCTTCTATGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR GCA 90 bp TGGCACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCCTTCCTGGTTGCTTTTaGTGGGGTATGGCATATATC +
Preference number: 4 (lower is better)
Translates to: WHKTKRDIWSLVCEGAIALPGCF*WGMAYI
Trigger: GATATATGCCATACCCCAGCAAAAGCAACCAGGAAG...GGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR GCA 90 bp AAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCGAACAGAGATCTCTaGAGCTGTGGGTTTCTTTGC +
Preference number: 4 (lower is better)
Translates to: KTKRDIWSLVCEGAIASLSNRDL*SCGFLC
Trigger: GCAAAGAAACCCACAGCTGCAGAGATCTCTGTTCGA...GAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR GCA 90 bp ACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTGCATAAAAACCTTATaGAACCACATCTGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: TKRDIWSLVCEGAIASLSCIKTL*NHIWAL
Trigger: CAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCA...GGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR GCA 90 bp CTGGGAGGAACAGGATACAAAGTTACATTTTCAGCAGCTACAATGTATAAAGGCCACAGGAGTTCCATTTaGAGGAGAGTGGCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: LGGTGYKVTFSAATMYKGHRSSI*RRVAGA
Trigger: AGCTCCAGCCACTCTCCTGCAAATGGAACTCCTGTG...GCCTTTATACATTGTAGCTGCTGAAAATGTAACTTTGTATCCTGTTCCTCCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453137.1
CDS-3UTR CCA 90 bp ACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCCTTTTGCGTTCCTTTTaGCTCCTCCAAGCTCTTCTG +
Preference number: 4 (lower is better)
Translates to: TKQNVTFGLWFVKEPLPLLLRSF*LLQALL
Trigger: CAGAAGAGCTTGGAGGAGCCAAAAGGAACGCAAAAG...GAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS-3UTR CCA 90 bp AACATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATCGCCAGGACCAGCTCTaGTTCCTGAGGTCATGCAGT +
Preference number: 4 (lower is better)
Translates to: NMHKNLMQPHLGLVFITHRQDQL*FLRSCS
Trigger: ACTGCATGACCTCAGGAACCAGAGCTGGTCCTGGCG...ATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCATGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CCA 90 bp AACATAGAAGCAGCTAATTCTGACTACATTGAAGCAGAGCACACACAATTTGAACAGGGCCACTCGAAATaGGTTGTCTGGACGCCCGAT +
Preference number: 4 (lower is better)
Translates to: NIEAANSDYIEAEHTQFEQGHSK*VVWTPD
Trigger: ATCGGGCGTCCAGACAACCCATTTCGAGTGGCCCTG...TTCAAATTGTGTGTGCTCTGCTTCAATGTAGTCAGAATTAGCTGCTTCTATGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CCA 90 bp AACATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATCAGGGCCACTCGAAATaGGTTGTCTGGACGCCCGAT +
Preference number: 4 (lower is better)
Translates to: NMHKNLMQPHLGLVFITHQGHSK*VVWTPD
Trigger: ATCGGGCGTCCAGACAACCCATTTCGAGTGGCCCTG...ATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCATGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CCA 90 bp AACATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATCAGGCCTGCCCAAGCTaGAGGACTGTCCCATTCCAA +
Preference number: 4 (lower is better)
Translates to: NMHKNLMQPHLGLVFITHQACPS*RTVPFQ
Trigger: TTGGAATGGGACAGTCCTCCAGCTTGGGCAGGCCTG...ATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCATGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CCA 90 bp AACATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATGGTGACAGTGTGCCTTaGGTCCAGCCACAGAAGCCA +
Preference number: 4 (lower is better)
Translates to: NMHKNLMQPHLGLVFITHGDSVP*VQPQKP
Trigger: TGGCTTCTGTGGCTGGACCCAAGGCACACTGTCACC...ATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCATGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CCA 90 bp AACATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATCACTTCTTCATGGCCTaGGGGCAGGAATGTCCTCCG +
Preference number: 4 (lower is better)
Translates to: NMHKNLMQPHLGLVFITHHFFMA*GQECPP
Trigger: CGGAGGACATTCCTGCCCCCAGGCCATGAAGAAGTG...ATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCATGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CCA 90 bp AACATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATACCCCCACTTCTTCATaGCCTGGGGGCAGGAATGTC +
Preference number: 4 (lower is better)
Translates to: NMHKNLMQPHLGLVFITHTPTSS*PGGRNV
Trigger: GACATTCCTGCCCCCAGGCCATGAAGAAGTGGGGGT...ATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCATGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CCA 90 bp AACATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATGGCATTCCGGACACCTaGCCTTCATACACCTCCCCA +
Preference number: 4 (lower is better)
Translates to: NMHKNLMQPHLGLVFITHGIPDT*PSYTSP
Trigger: TGGGGAGGTGTATGAAGGCCAGGTGTCCGGAATGCC...ATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCATGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp AACATAGAAGCAGCTAATTCTGACTACATTGAAGCAGAGCACACACAATTTGAAGGGCATCCACTTAACTaGCAGCATGGCACAGCCTCC +
Preference number: 4 (lower is better)
Translates to: NIEAANSDYIEAEHTQFEGHPLN*QHGTAS
Trigger: GGAGGCTGTGCCATGCTGCCAGTTAAGTGGATGCCC...TTCAAATTGTGTGTGCTCTGCTTCAATGTAGTCAGAATTAGCTGCTTCTATGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp ATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATTTTGCCCATGAGAGGAAATaGGGAGGGAGCCAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: MHKNLMQPHLGLVFITHFAHERK*GGSQGR
Trigger: CCTTCCCTGGCTCCCTCCCCATTTCCTCTCATGGGC...AAAATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642122.1
CDS-3UTR TCA 90 bp AACATAGAAGCAGCTAATTCTGACTACATTGAAGCAGAGCACACACAATTTGAATCCCATTCCAACAAGTaGAGGAGCTCTGCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: NIEAANSDYIEAEHTQFESHSNK*RSSAGP
Trigger: TGGCCCTGCAGAGCTCCTTCACTTGTTGGAATGGGA...TTCAAATTGTGTGTGCTCTGCTTCAATGTAGTCAGAATTAGCTGCTTCTATGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR TCA 90 bp AAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCCAATGTCTCGGTGGATaGAGTGGTTTTCCTCCAAAT +
Preference number: 4 (lower is better)
Translates to: KTKRDIWSLVCEGAIASLQCLGG*SGFPPN
Trigger: ATTTGGAGGAAAACCACTTCATCCACCGAGACATTG...GAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR TCA 90 bp AACATAGAAGCAGCTAATTCTGACTACATTGAAGCAGAGCACACACAATTTGAATCCGGCCTCCACTGGTaGCAAACTCCAGAACTTCCT +
Preference number: 4 (lower is better)
Translates to: NIEAANSDYIEAEHTQFESGLHW*QTPELP
Trigger: AGGAAGTTCTGGAGTTTGTCACCAGTGGAGGCCGGA...TTCAAATTGTGTGTGCTCTGCTTCAATGTAGTCAGAATTAGCTGCTTCTATGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR TCA 90 bp AACATAGAAGCAGCTAATTCTGACTACATTGAAGCAGAGCACACACAATTTGAATCCCGTTTTGCCTGTTaGGAGACCAGGAGAGGAGGA +
Preference number: 4 (lower is better)
Translates to: NIEAANSDYIEAEHTQFESRFAC*ETRRGG
Trigger: TCCTCCTCTCCTGGTCTCTCAACAGGCAAAACGGGA...TTCAAATTGTGTGTGCTCTGCTTCAATGTAGTCAGAATTAGCTGCTTCTATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR TCA 90 bp TGGGAGGAACAGGATACAAAGTTACATTTTCAGCAGCTACAATGTATAAAGGCAGCCTCAGGCAGAAGGTaGAGCAAAACAACTGCTTCC +
Preference number: 4 (lower is better)
Translates to: WEEQDTKLHFQQLQCIKAASGRR*SKTTAS
Trigger: GGAAGCAGTTGTTTTGCTTCACCTTCTGCCTGAGGC...TGCCTTTATACATTGTAGCTGCTGAAAATGTAACTTTGTATCCTGTTCCTCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453137.1
CDS-3UTR GCA 90 bp AACATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATTGCAGTGCTCACTGCTaGTCCTCATCCACGGACTCA +
Preference number: 4 (lower is better)
Translates to: NMHKNLMQPHLGLVFITHCSAHC*SSSTDS
Trigger: TGAGTCCGTGGATGAGGAGCAGCAGTGAGCACTGCA...ATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCATGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR GCA 90 bp AACATAGAAGCAGCTAATTCTGACTACATTGAAGCAGAGCACACACAATTTGAAAGCACTGTCCAACCATaGTTCCCTGGAGTGGGCATC +
Preference number: 4 (lower is better)
Translates to: NIEAANSDYIEAEHTQFESTVQP*FPGVGI
Trigger: GATGCCCACTCCAGGGAAGCATGGTTGGACAGTGCT...TTCAAATTGTGTGTGCTCTGCTTCAATGTAGTCAGAATTAGCTGCTTCTATGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR GCA 90 bp AACATAGAAGCAGCTAATTCTGACTACATTGAAGCAGAGCACACACAATTTGAACAAGTGAAGGAGCTCTaGAGGGCCATCTTGGAGCCT +
Preference number: 4 (lower is better)
Translates to: NIEAANSDYIEAEHTQFEQVKEL*RAILEP
Trigger: AGGCTCCAAGATGGCCCTGCAGAGCTCCTTCACTTG...TTCAAATTGTGTGTGCTCTGCTTCAATGTAGTCAGAATTAGCTGCTTCTATGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR GCA 90 bp AACATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATCATGCCAGACCATCCTaGCTTGCTCCTTCCCGGTTT +
Preference number: 4 (lower is better)
Translates to: NMHKNLMQPHLGLVFITHHARPS*LAPSRF
Trigger: AAACCGGGAAGGAGCAAGGCAGGATGGTCTGGCATG...ATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCATGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR GCA 90 bp AACATAGAAGCAGCTAATTCTGACTACATTGAAGCAGAGCACACACAATTTGAATCCTTGTCCCCACCATaGGACCATCTGCAGCCAGAA +
Preference number: 4 (lower is better)
Translates to: NIEAANSDYIEAEHTQFESLSPP*DHLQPE
Trigger: TTCTGGCTGCAGATGGTCGCATGGTGGGGACAAGGA...TTCAAATTGTGTGTGCTCTGCTTCAATGTAGTCAGAATTAGCTGCTTCTATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR GCA 90 bp ATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATTTTTCCATCTGCATGGCTTaGAGCTCCTGGTGCTTCCGG +
Preference number: 4 (lower is better)
Translates to: MHKNLMQPHLGLVFITHFSICMA*SSWCFR
Trigger: CCGGAAGCACCAGGAGCTGCAAGCCATGCAGATGGA...AAAATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR GCA 90 bp ACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCCTTCCTGGTTGCTTTTaGTGGGGTATGGCATATATC +
Preference number: 4 (lower is better)
Translates to: TKQNVTFGLWFVKEPLPLLPGCF*WGMAYI
Trigger: GATATATGCCATACCCCAGCAAAAGCAACCAGGAAG...GAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp AACATAGAAGCAGCTAATTCTGACTACATTGAAGCAGAGCACACACAATTTGAACCTGAGGTCATGCAGTaGAGGGGAATACTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: NIEAANSDYIEAEHTQFEPEVMQ*RGILQL
Trigger: GAGCTGGAGTATTCCCCTCCACTGCATGACCTCAGG...TTCAAATTGTGTGTGCTCTGCTTCAATGTAGTCAGAATTAGCTGCTTCTATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CCA 90 bp ATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATTTTCGCCAGGACCAGCTCTaGTTCCTGAGGTCATGCAGT +
Preference number: 4 (lower is better)
Translates to: MHKNLMQPHLGLVFITHFRQDQL*FLRSCS
Trigger: ACTGCATGACCTCAGGAACCAGAGCTGGTCCTGGCG...AAAATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CCA 90 bp AACATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATTTGTGGGGCAGCAGCTaGGCAATGTACCTTCCAGAG +
Preference number: 4 (lower is better)
Translates to: NMHKNLMQPHLGLVFITHLWGSS*AMYLPE
Trigger: CTCTGGAAGGTACATTGCCCAGCTGCTGCCCCACAA...ATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCATGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CCA 90 bp ATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATTTTCAGGCCTGCCCAAGCTaGAGGACTGTCCCATTCCAA +
Preference number: 4 (lower is better)
Translates to: MHKNLMQPHLGLVFITHFQACPS*RTVPFQ
Trigger: TTGGAATGGGACAGTCCTCCAGCTTGGGCAGGCCTG...AAAATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CCA 90 bp AACATAGAAGCAGCTAATTCTGACTACATTGAAGCAGAGCACACACAATTTGAACTCTCATCTTCTCCCTaGGCACAGTCCTGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: NIEAANSDYIEAEHTQFELSSSP*AQSWWK
Trigger: CTTCCACCAGGACTGTGCCCAGGGAGAAGATGAGAG...TTCAAATTGTGTGTGCTCTGCTTCAATGTAGTCAGAATTAGCTGCTTCTATGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CCA 90 bp AACATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATAAGCCACGATGGCTCTaGATCCTTGTCCCCACCATG +
Preference number: 4 (lower is better)
Translates to: NMHKNLMQPHLGLVFITHKPRWL*ILVPTM
Trigger: CATGGTGGGGACAAGGATCCAGAGCCATCGTGGCTT...ATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCATGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CCA 90 bp TGGCACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCACAGGTTTCTTGATTTaGGTGCTGTATTCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: WHKTKRDIWSLVCEGAIATGFLI*VLYSAG
Trigger: TCCTGCAGAATACAGCACCCAAATCAAGAAACCTGT...GGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGTGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CCA 90 bp ATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATTTTCGTGGGACCGCATCATaGTGTTCTTCCCGCCTTTCC +
Preference number: 4 (lower is better)
Translates to: MHKNLMQPHLGLVFITHFRGTAS*CSSRLS
Trigger: GGAAAGGCGGGAAGAACACCATGATGCGGTCCCACG...AAAATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CCA 90 bp ACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCATATTCACTTCCCCGTaGCCTTCCATCACTTTTAAA +
Preference number: 4 (lower is better)
Translates to: TKRDIWSLVCEGAIASLSIFTSP*PSITFK
Trigger: TTTAAAAGTGATGGAAGGCCACGGGGAAGTGAATAT...GGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
CDS-3UTR CCA 90 bp ATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATTTTGGCATTCCGGACACCTaGCCTTCATACACCTCCCCA +
Preference number: 4 (lower is better)
Translates to: MHKNLMQPHLGLVFITHFGIPDT*PSYTSP
Trigger: TGGGGAGGTGTATGAAGGCCAGGTGTCCGGAATGCC...AAAATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp ACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCCGAACAATGTTCTGGTaGTTGAATTTGCTGATGATC +
Preference number: 4 (lower is better)
Translates to: TKRDIWSLVCEGAIASLSRTMFW*LNLLMI
Trigger: GATCATCAGCAAATTCAACCACCAGAACATTGTTCG...GGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp ATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATTTTGGGCATCCACTTAACTaGCAGCATGGCACAGCCTCC +
Preference number: 4 (lower is better)
Translates to: MHKNLMQPHLGLVFITHFGHPLN*QHGTAS
Trigger: GGAGGCTGTGCCATGCTGCCAGTTAAGTGGATGCCC...AAAATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp TCCCATAGCAGCACTCCAAAGGACCATGTGTCTGTTTTAGAAGTGAATATTCCTTTGTTTCTGGATCCGTaGACCTTGTGCAACTCCGAA +
Preference number: 4 (lower is better)
Translates to: SHSSTPKDHVSVLEVNIPLFLDP*TLCNSE
Trigger: TTCGGAGTTGCACAAGGTCCACGGATCCAGAAACAA...AGGAATATTCACTTCTAAAACAGACACATGGTCCTTTGGAGTGCTGCTATGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431873.6
CDS-3UTR CCA 90 bp ACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCTTGCTTTTCAGAATaGTATCCTCGTAATGACCAG +
Preference number: 4 (lower is better)
Translates to: TKRDIWSLVCEGAIASLSSCFSE*YPRNDQ
Trigger: CTGGTCATTACGAGGATACCATTCTGAAAAGCAAGA...GGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp ACATCCGGGTCCTGGGTGCAGTATTCAATCCTCTCCAAAATGATGGCAAAGTTGTTATGCAACCACATCTaGGCCTTGTATTTATCACTC +
Preference number: 4 (lower is better)
Translates to: TSGSWVQYSILSKMMAKLLCNHI*ALYLSL
Trigger: GAGTGATAAATACAAGGCCCAGATGTGGTTGCATAA...CAACTTTGCCATCATTTTGGAGAGGATTGAATACTGCACCCAGGACCCGGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431873.6
CDS-3UTR CCA 90 bp TGGGAGGAACAGGATACAAAGTTACATTTTCAGCAGCTACAATGTATAAAGGCATGTTGCTCAGGCACTTaGGTGAGGAAGTGTCTCAGG +
Preference number: 4 (lower is better)
Translates to: WEEQDTKLHFQQLQCIKACCSGT*VRKCLR
Trigger: CCTGAGACACTTCCTCACCCAAGTGCCTGAGCAACA...TGCCTTTATACATTGTAGCTGCTGAAAATGTAACTTTGTATCCTGTTCCTCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453137.1
3UTR CAA 72 bp CCACTGGTGACAAACTCCAGAACTTCCTGGTTGCTTTaGCTGGGGTATGGCATATATCCAAGAGAAAAGATT +
Preference number: 4 (lower is better)
Translates to: PLVTNSRTSWLL*LGYGIYPREKI
Trigger: AATCTTTTCTCTTGGATATATGCCATACCCCAGCAAAAGCAACCAGGAAGTTCTGGAGTTTGTCACCAGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431873.6
CDS-3UTR TCA 90 bp AACATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATAGGAACTACTATGGTTaGAGGGAGGTGGCAGTTGGG +
Preference number: 4 (lower is better)
Translates to: NMHKNLMQPHLGLVFITHRNYYG*REVAVG
Trigger: CCCAACTGCCACCTCCCTTCAACCATAGTAGTTCCT...ATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCATGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS-3UTR TCA 90 bp ATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATTTTTCCCATTCCAACAAGTaGAGGAGCTCTGCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: MHKNLMQPHLGLVFITHFSHSNK*RSSAGP
Trigger: TGGCCCTGCAGAGCTCCTTCACTTGTTGGAATGGGA...AAAATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR TCA 90 bp AACATAGAAGCAGCTAATTCTGACTACATTGAAGCAGAGCACACACAATTTGAACATCCTTTAGGGTCCTaGCCTGCCATTGAGGAGTGT +
Preference number: 4 (lower is better)
Translates to: NIEAANSDYIEAEHTQFEHPLGS*PAIEEC
Trigger: ACACTCCTCAATGGCAGGTCAGGACCCTAAAGGATG...TTCAAATTGTGTGTGCTCTGCTTCAATGTAGTCAGAATTAGCTGCTTCTATGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR TCA 90 bp AACATAGAAGCAGCTAATTCTGACTACATTGAAGCAGAGCACACACAATTTGAATCAAGACTCCACGAATaGGCCAGGACATTCGGAGCT +
Preference number: 4 (lower is better)
Translates to: NIEAANSDYIEAEHTQFESRLHE*ARTFGA
Trigger: AGCTCCGAATGTCCTGGCTCATTCGTGGAGTCTTGA...TTCAAATTGTGTGTGCTCTGCTTCAATGTAGTCAGAATTAGCTGCTTCTATGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR TCA 90 bp AACATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATTTCCCACAAGGGAAGTaGCGTAGCCTGAACAGAGGT +
Preference number: 4 (lower is better)
Translates to: NMHKNLMQPHLGLVFITHFPQGK*RSLNRG
Trigger: ACCTCTGTTCAGGCTACGTCACTTCCCTTGTGGGAA...ATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCATGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR TCA 90 bp ACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCAGAGCACACACAATTTaGAAGAAGCATAAGGAAGTA +
Preference number: 4 (lower is better)
Translates to: TKRDIWSLVCEGAIASLSRAHTI*KKHKEV
Trigger: TACTTCCTTATGCTTCTTTCAAATTGTGTGTGCTCT...GGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR GCA 90 bp AACATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATCCAGACCATATCGGCTaGGATGAGACAGGAAAGGGA +
Preference number: 4 (lower is better)
Translates to: NMHKNLMQPHLGLVFITHPDHIG*DETGKG
Trigger: TCCCTTTCCTGTCTCATCGCAGCCGATATGGTCTGG...ATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCATGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR GCA 90 bp AACATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATAGGGGAAGTCAAAGCTaGACTCCAGACCATATCGGC +
Preference number: 4 (lower is better)
Translates to: NMHKNLMQPHLGLVFITHRGSQS*TPDHIG
Trigger: GCCGATATGGTCTGGAGTGCAGCTTTGACTTCCCCT...ATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCATGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR GCA 90 bp ATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATTTTCTCCTCCTCCCGTTTTaGCTGTTGAGAGACCAGGAG +
Preference number: 4 (lower is better)
Translates to: MHKNLMQPHLGLVFITHFLLLPF*LLRDQE
Trigger: CTCCTGGTCTCTCAACAGGCAAAACGGGAGGAGGAG...AAAATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR GCA 90 bp AACATAGAAGCAGCTAATTCTGACTACATTGAAGCAGAGCACACACAATTTGAACGGAAGTCTCCCAGTTaGAACGTTAGGTGGGACAGT +
Preference number: 4 (lower is better)
Translates to: NIEAANSDYIEAEHTQFERKSPS*NVRWDS
Trigger: ACTGTCCCACCTAACGTTGCAACTGGGAGACTTCCG...TTCAAATTGTGTGTGCTCTGCTTCAATGTAGTCAGAATTAGCTGCTTCTATGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR GCA 90 bp ACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCGGTTCATGCTATTCTTaGTTTTCAGAATGGTATCCT +
Preference number: 4 (lower is better)
Translates to: TKRDIWSLVCEGAIASLSGSCYS*FSEWYP
Trigger: AGGATACCATTCTGAAAAGCAAGAATAGCATGAACC...GGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp ATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATTTTTTGTGGGGCAGCAGCTaGGCAATGTACCTTCCAGAG +
Preference number: 4 (lower is better)
Translates to: MHKNLMQPHLGLVFITHFLWGSS*AMYLPE
Trigger: CTCTGGAAGGTACATTGCCCAGCTGCTGCCCCACAA...AAAATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCAT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CCA 90 bp ATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATTTTCATGCTTCCCTGGAGTaGGCATCAGGAGGATCTCTC +
Preference number: 4 (lower is better)
Translates to: MHKNLMQPHLGLVFITHFHASLE*ASGGSL
Trigger: GAGAGATCCTCCTGATGCCCACTCCAGGGAAGCATG...AAAATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CCA 90 bp AACATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATAGCTGCGGTTTCCACTaGAGATGTATTCCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: NMHKNLMQPHLGLVFITHSCGFH*RCIPGP
Trigger: TGGCCCTGGAATACATCTCCAGTGGAAACCGCAGCT...ATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCATGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CCA 90 bp AACATAGAAGCAGCTAATTCTGACTACATTGAAGCAGAGCACACACAATTTGAAAGCTGCGGTTTCCACTaGAGATGTATTCCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: NIEAANSDYIEAEHTQFESCGFH*RCIPGP
Trigger: TGGCCCTGGAATACATCTCCAGTGGAAACCGCAGCT...TTCAAATTGTGTGTGCTCTGCTTCAATGTAGTCAGAATTAGCTGCTTCTATGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CCA 90 bp AACATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATTTAACTGGTTTGTACTaGGGCAGGCGTCCTCTCCCT +
Preference number: 4 (lower is better)
Translates to: NMHKNLMQPHLGLVFITHLTGLY*GRRPLP
Trigger: AGGGAGAGGACGCCTGCCCCAGTACAAACCAGTTAA...ATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCATGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CCA 90 bp AAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCCAGCGAACAATGTTCTaGTGGTTGAATTTGCTGATG +
Preference number: 4 (lower is better)
Translates to: KTKRDIWSLVCEGAIASLQRTMF*WLNLLM
Trigger: CATCAGCAAATTCAACCACCAGAACATTGTTCGCTG...GAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp ACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTTCCTCTTCCACAAGTaGACCATATTCTATCGGCAA +
Preference number: 4 (lower is better)
Translates to: TKQNVTFGLWFVKEPLPLFLFHK*TIFYRQ
Trigger: TTGCCGATAGAATATGGTCCACTTGTGGAAGAGGAA...GAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp AAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTTCCTCTTCCACAAGTaGACCATATTCTATCGGCAA +
Preference number: 4 (lower is better)
Translates to: KTKRDIWSLVCEGAIASLFLFHK*TIFYRQ
Trigger: TTGCCGATAGAATATGGTCCACTTGTGGAAGAGGAA...GAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp AACATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATTGGTGGGCTTGTTTCTaGATCCGTGGACCTTGTGCA +
Preference number: 4 (lower is better)
Translates to: NMHKNLMQPHLGLVFITHWWACF*IRGPCA
Trigger: TGCACAAGGTCCACGGATCCAGAAACAAGCCCACCA...ATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCATGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp TGGGAGGAACAGGATACAAAGTTACATTTTCAGCAGCTACAATGTATAAAGGCATACTGGTGCGTGGACTaGGTGCTAGAATTCATGGTC +
Preference number: 4 (lower is better)
Translates to: WEEQDTKLHFQQLQCIKAYWCVD*VLEFMV
Trigger: GACCATGAATTCTAGCACCCAGTCCACGCACCAGTA...TGCCTTTATACATTGTAGCTGCTGAAAATGTAACTTTGTATCCTGTTCCTCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453137.1
CDS-3UTR CCA 90 bp TGGGAGGAACAGGATACAAAGTTACATTTTCAGCAGCTACAATGTATAAAGGCAGTCTTTCTCAGATACTaGTGCGTGGACTGGGTGCTA +
Preference number: 4 (lower is better)
Translates to: WEEQDTKLHFQQLQCIKAVFLRY*CVDWVL
Trigger: TAGCACCCAGTCCACGCACCAGTATCTGAGAAAGAC...TGCCTTTATACATTGTAGCTGCTGAAAATGTAACTTTGTATCCTGTTCCTCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453137.1
CDS-3UTR TCA 90 bp ATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATTTTGGTCACAGAAGCAGATaGCCTTGTGGCTTTCAGGGT +
Preference number: 4 (lower is better)
Translates to: MHKNLMQPHLGLVFITHFGHRSR*PCGFQG
Trigger: ACCCTGAAAGCCACAAGGTCATCTGCTTCTGTGACC...AAAATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
CDS-3UTR TCA 90 bp AACATAGAAGCAGCTAATTCTGACTACATTGAAGCAGAGCACACACAATTTGAAGCTGGTAGCCGTAATTaGCATTCCCACAAGGGAAGT +
Preference number: 4 (lower is better)
Translates to: NIEAANSDYIEAEHTQFEAGSRN*HSHKGS
Trigger: ACTTCCCTTGTGGGAATGTCAATTACGGCTACCAGC...TTCAAATTGTGTGTGCTCTGCTTCAATGTAGTCAGAATTAGCTGCTTCTATGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR TCA 90 bp AACATAGAAGCAGCTAATTCTGACTACATTGAAGCAGAGCACACACAATTTGAATTGGTCTCTGGTTTGTaGAGGAGCCATTGCCTCTCT +
Preference number: 4 (lower is better)
Translates to: NIEAANSDYIEAEHTQFELVSGL*RSHCLS
Trigger: AGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAA...TTCAAATTGTGTGTGCTCTGCTTCAATGTAGTCAGAATTAGCTGCTTCTATGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR TCA 90 bp TCCCATAGCAGCACTCCAAAGGACCATGTGTCTGTTTTAGAAGTGAATATTCCTGCACAAAACAAAACGTaGCATTTGGTCTCTGGTTTG +
Preference number: 4 (lower is better)
Translates to: SHSSTPKDHVSVLEVNIPAQNKT*HLVSGL
Trigger: CAAACCAGAGACCAAATGTCACGTTTTGTTTTGTGC...AGGAATATTCACTTCTAAAACAGACACATGGTCCTTTGGAGTGCTGCTATGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000431873.6
CDS-3UTR TCA 90 bp ACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTTCGAAAGAATAGGATaGACCCATGCTCAAAACCTT +
Preference number: 4 (lower is better)
Translates to: TKQNVTFGLWFVKEPLPLFERIG*THAQNL
Trigger: AAGGTTTTGAGCATGGGTTCATCCTATTCTTTCGAA...GAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR GCA 90 bp AACATAGAAGCAGCTAATTCTGACTACATTGAAGCAGAGCACACACAATTTGAATTGGGTGCTGTATTCTaGAGGATCTTGTCCTCTCCG +
Preference number: 4 (lower is better)
Translates to: NIEAANSDYIEAEHTQFELGAVF*RILSSP
Trigger: CGGAGAGGACAAGATCCTGCAGAATACAGCACCCAA...TTCAAATTGTGTGTGCTCTGCTTCAATGTAGTCAGAATTAGCTGCTTCTATGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR GCA 90 bp AACATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATCCAGAACTTCCTGGTTaGTTTTGCTGGGGTATGGCA +
Preference number: 4 (lower is better)
Translates to: NMHKNLMQPHLGLVFITHPELPG*FCWGMA
Trigger: TGCCATACCCCAGCAAAAGCAACCAGGAAGTTCTGG...ATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCATGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR GCA 90 bp CAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTGTGTGGCTCCTTCTTTaGTATAGGATTATTCTTTTT +
Preference number: 4 (lower is better)
Translates to: QNVTFGLWFVKEPLPLSPVWLLL*YRIILF
Trigger: AAAAAGAATAATCCTATAGCAAAGAAGGAGCCACAC...AGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR GCA 90 bp ATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATTTTCGGAAGTCTCCCAGTTaGAACGTTAGGTGGGACAGT +
Preference number: 4 (lower is better)
Translates to: MHKNLMQPHLGLVFITHFRKSPS*NVRWDS
Trigger: ACTGTCCCACCTAACGTTGCAACTGGGAGACTTCCG...AAAATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR GCA 90 bp TGGCACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCGGTTCATGCTATTCTTaGTTTTCAGAATGGTATCCT +
Preference number: 4 (lower is better)
Translates to: WHKTKRDIWSLVCEGAIAGSCYS*FSEWYP
Trigger: AGGATACCATTCTGAAAAGCAAGAATAGCATGAACC...GGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGTGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp ACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCCCAATGCAGACTTTCTaGATTAACTGGTTTGTACTG +
Preference number: 4 (lower is better)
Translates to: TKQNVTFGLWFVKEPLPLPMQTF*INWFVL
Trigger: CAGTACAAACCAGTTAATCCAGAAAGTCTGCATTGG...GAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CCA 90 bp AAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCCCAATGCAGACTTTCTaGATTAACTGGTTTGTACTG +
Preference number: 4 (lower is better)
Translates to: KTKRDIWSLVCEGAIASLPMQTF*INWFVL
Trigger: CAGTACAAACCAGTTAATCCAGAAAGTCTGCATTGG...GAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CCA 90 bp AAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCCGAACAATGTTCTGGTaGTTGAATTTGCTGATGATC +
Preference number: 4 (lower is better)
Translates to: KTKRDIWSLVCEGAIASLRTMFW*LNLLMI
Trigger: GATCATCAGCAAATTCAACCACCAGAACATTGTTCG...GAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp AACATAGAAGCAGCTAATTCTGACTACATTGAAGCAGAGCACACACAATTTGAAGCAGCAATGTCTCGGTaGATGAAGTGGTTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: NIEAANSDYIEAEHTQFEAAMSR*MKWFSS
Trigger: GGAGGAAAACCACTTCATCCACCGAGACATTGCTGC...TTCAAATTGTGTGTGCTCTGCTTCAATGTAGTCAGAATTAGCTGCTTCTATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp AACATAGAAGCAGCTAATTCTGACTACATTGAAGCAGAGCACACACAATTTGAATCAAGAGGCAGTTTCTaGCAGCAATGTCTCGGTGGA +
Preference number: 4 (lower is better)
Translates to: NIEAANSDYIEAEHTQFESRGSF*QQCLGG
Trigger: TCCACCGAGACATTGCTGCCAGAAACTGCCTCTTGA...TTCAAATTGTGTGTGCTCTGCTTCAATGTAGTCAGAATTAGCTGCTTCTATGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp AAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCGCTTTTGCTGGGGTATaGCATATATCCAAGAGAAAA +
Preference number: 4 (lower is better)
Translates to: KTKRDIWSLVCEGAIASLAFAGV*HISKRK
Trigger: TTTTCTCTTGGATATATGCCATACCCCAGCAAAAGC...GAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp ATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATTTTGGTTCCACAAGCTGGTaGGCTTGTTTCTGGATCCGT +
Preference number: 4 (lower is better)
Translates to: MHKNLMQPHLGLVFITHFGSTSW*ACFWIR
Trigger: ACGGATCCAGAAACAAGCCCACCAGCTTGTGGAACC...AAAATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp AACATAGAAGCAGCTAATTCTGACTACATTGAAGCAGAGCACACACAATTTGAAGTTACCCCTGTCGTGTaGCTCCTTCTTTGCTATAGG +
Preference number: 4 (lower is better)
Translates to: NIEAANSDYIEAEHTQFEVTPVV*LLLCYR
Trigger: CCTATAGCAAAGAAGGAGCCACACGACAGGGGTAAC...TTCAAATTGTGTGTGCTCTGCTTCAATGTAGTCAGAATTAGCTGCTTCTATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp AAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCTTGCTTTTCAGAATaGTATCCTCGTAATGACCAG +
Preference number: 4 (lower is better)
Translates to: KTKRDIWSLVCEGAIASLSCFSE*YPRNDQ
Trigger: CTGGTCATTACGAGGATACCATTCTGAAAAGCAAGA...GAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp AAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCACAAAACGTGACATTTaGTCTCTGGTTTGTGAAGGA +
Preference number: 4 (lower is better)
Translates to: KTKRDIWSLVCEGAIASLTKRDI*SLVCEG
Trigger: TCCTTCACAAACCAGAGACCAAATGTCACGTTTTGT...GAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp ACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTTATGCAACCACATCTaGGCCTTGTATTTATCACTC +
Preference number: 4 (lower is better)
Translates to: TKQNVTFGLWFVKEPLPLLCNHI*ALYLSL
Trigger: GAGTGATAAATACAAGGCCCAGATGTGGTTGCATAA...GAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp AACATAGAAGCAGCTAATTCTGACTACATTGAAGCAGAGCACACACAATTTGAACCCTCTCCCCTCAAATaGCTCATGTCCACATCAACA +
Preference number: 4 (lower is better)
Translates to: NIEAANSDYIEAEHTQFEPSPLK*LMSTST
Trigger: TGTTGATGTGGACATGAGCCATTTGAGGGGAGAGGG...TTCAAATTGTGTGTGCTCTGCTTCAATGTAGTCAGAATTAGCTGCTTCTATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp AACATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATCCCTCTCCCCTCAAATaGCTCATGTCCACATCAACA +
Preference number: 4 (lower is better)
Translates to: NMHKNLMQPHLGLVFITHPSPLK*LMSTST
Trigger: TGTTGATGTGGACATGAGCCATTTGAGGGGAGAGGG...ATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCATGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp ACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCGGATTAGACCCAATATaGTCTGCAGATTTTATTAGA +
Preference number: 4 (lower is better)
Translates to: TKRDIWSLVCEGAIASLSGLDPI*SADFIR
Trigger: TCTAATAAAATCTGCAGACCATATTGGGTCTAATCC...GGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642122.1
CDS-3UTR TCA 90 bp AACATAGAAGCAGCTAATTCTGACTACATTGAAGCAGAGCACACACAATTTGAATTTTCCTCCAAATACTaGCAGCCACAGGCAATGTCC +
Preference number: 4 (lower is better)
Translates to: NIEAANSDYIEAEHTQFEFSSKY*QPQAMS
Trigger: GGACATTGCCTGTGGCTGTCAGTATTTGGAGGAAAA...TTCAAATTGTGTGTGCTCTGCTTCAATGTAGTCAGAATTAGCTGCTTCTATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR TCA 90 bp AACATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATCAATCCTCTCCAAAATaGTGGCAAAGTTGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: NMHKNLMQPHLGLVFITHQSSPK*WQSWAC
Trigger: ACAGGCCCAACTTTGCCATCATTTTGGAGAGGATTG...ATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCATGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR TCA 90 bp ATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATTTTGAAGGAGGGTTGGACTaGGAGAATGCCATATTCACG +
Preference number: 4 (lower is better)
Translates to: MHKNLMQPHLGLVFITHFEGGLD*ENAIFT
Trigger: CGTGAATATGGCATTCTCTCAGTCCAACCCTCCTTC...AAAATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR GCA 90 bp ATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATTTTAGAGCTCTTGATCGGTaGAGGAAACGTAGCACTGGT +
Preference number: 4 (lower is better)
Translates to: MHKNLMQPHLGLVFITHFRALDR*RKRSTG
Trigger: ACCAGTGCTACGTTTCCTGCACCGATCAAGAGCTCT...AAAATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR GCA 90 bp AACATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATTCGAACAGAGATCTCTaGAGCTGTGGGTTTCTTTGC +
Preference number: 4 (lower is better)
Translates to: NMHKNLMQPHLGLVFITHSNRDL*SCGFLC
Trigger: GCAAAGAAACCCACAGCTGCAGAGATCTCTGTTCGA...ATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCATGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp ATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATTTTCTGAGCAATAGAGCATaGTCTTGGTGGTCCTGGAAC +
Preference number: 4 (lower is better)
Translates to: MHKNLMQPHLGLVFITHFLSNRA*SWWSWN
Trigger: GTTCCAGGACCACCAAGACCATGCTCTATTGCTCAG...AAAATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CCA 90 bp AACATAGAAGCAGCTAATTCTGACTACATTGAAGCAGAGCACACACAATTTGAAATTCTCCAGTCTCTCTaGGTGGAACGTGTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: NIEAANSDYIEAEHTQFEILQSL*VERVCL
Trigger: AAGACAGACACGTTCCACCCAGAGAGACTGGAGAAT...TTCAAATTGTGTGTGCTCTGCTTCAATGTAGTCAGAATTAGCTGCTTCTATGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CCA 90 bp TCCCATAGCAGCACTCCAAAGGACCATGTGTCTGTTTTAGAAGTGAATATTCCTCGAACAATGTTCTGGTaGTTGAATTTGCTGATGATC +
Preference number: 4 (lower is better)
Translates to: SHSSTPKDHVSVLEVNIPRTMFW*LNLLMI
Trigger: GATCATCAGCAAATTCAACCACCAGAACATTGTTCG...AGGAATATTCACTTCTAAAACAGACACATGGTCCTTTGGAGTGCTGCTATGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431873.6
CDS-3UTR CCA 90 bp ATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATTTTGCAGCAATGTCTCGGTaGATGAAGTGGTTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: MHKNLMQPHLGLVFITHFAAMSR*MKWFSS
Trigger: GGAGGAAAACCACTTCATCCACCGAGACATTGCTGC...AAAATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp AACATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATATTACATCCGGGTCCTaGGTGCAGTATTCAATCCTC +
Preference number: 4 (lower is better)
Translates to: NMHKNLMQPHLGLVFITHITSGS*VQYSIL
Trigger: GAGGATTGAATACTGCACCCAGGACCCGGATGTAAT...ATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCATGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp AACATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATTTGTTTCTGGATCCGTaGACCTTGTGCAACTCCGAA +
Preference number: 4 (lower is better)
Translates to: NMHKNLMQPHLGLVFITHLFLDP*TLCNSE
Trigger: TTCGGAGTTGCACAAGGTCCACGGATCCAGAAACAA...ATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCATGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp AACATAGAAGCAGCTAATTCTGACTACATTGAAGCAGAGCACACACAATTTGAATTGTTTCTGGATCCGTaGACCTTGTGCAACTCCGAA +
Preference number: 4 (lower is better)
Translates to: NIEAANSDYIEAEHTQFELFLDP*TLCNSE
Trigger: TTCGGAGTTGCACAAGGTCCACGGATCCAGAAACAA...TTCAAATTGTGTGTGCTCTGCTTCAATGTAGTCAGAATTAGCTGCTTCTATGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR GCA 90 bp AAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCGTGTGGCTCCTTCTTTaGTATAGGATTATTCTTTTT +
Preference number: 4 (lower is better)
Translates to: KTKRDIWSLVCEGAIASLVWLLL*YRIILF
Trigger: AAAAAGAATAATCCTATAGCAAAGAAGGAGCCACAC...GAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR GCA 90 bp TGGGAGGAACAGGATACAAAGTTACATTTTCAGCAGCTACAATGTATAAAGGCAGTGAAGCAAAACAACTaGTTCCAAGAGAGACTGATG +
Preference number: 4 (lower is better)
Translates to: WEEQDTKLHFQQLQCIKAVKQNN*FQERLM
Trigger: CATCAGTCTCTCTTGGAAGCAGTTGTTTTGCTTCAC...TGCCTTTATACATTGTAGCTGCTGAAAATGTAACTTTGTATCCTGTTCCTCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453137.1
CDS-3UTR CCA 90 bp TGGGAGGAACAGGATACAAAGTTACATTTTCAGCAGCTACAATGTATAAAGGCAGGGCAAATCTTAAACTaGGAGGAACAGGATACAAAG +
Preference number: 4 (lower is better)
Translates to: WEEQDTKLHFQQLQCIKAGQILN*EEQDTK
Trigger: CTTTGTATCCTGTTCCTCCCAGTTTAAGATTTGCCC...TGCCTTTATACATTGTAGCTGCTGAAAATGTAACTTTGTATCCTGTTCCTCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453137.1
CDS-3UTR TCA 90 bp ATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATTTTCAATGTCTCGGTGGATaGAGTGGTTTTCCTCCAAAT +
Preference number: 4 (lower is better)
Translates to: MHKNLMQPHLGLVFITHFQCLGG*SGFPPN
Trigger: ATTTGGAGGAAAACCACTTCATCCACCGAGACATTG...AAAATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR TCA 90 bp AACATAGAAGCAGCTAATTCTGACTACATTGAAGCAGAGCACACACAATTTGAAGCACAAAACAAAACGTaGCATTTGGTCTCTGGTTTG +
Preference number: 4 (lower is better)
Translates to: NIEAANSDYIEAEHTQFEAQNKT*HLVSGL
Trigger: CAAACCAGAGACCAAATGTCACGTTTTGTTTTGTGC...TTCAAATTGTGTGTGCTCTGCTTCAATGTAGTCAGAATTAGCTGCTTCTATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp ATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATTTTCCTGGTTGCTTTTGCTaGGGTATGGCATATATCCAA +
Preference number: 4 (lower is better)
Translates to: MHKNLMQPHLGLVFITHFPGCFC*GMAYIQ
Trigger: TTGGATATATGCCATACCCCAGCAAAAGCAACCAGG...AAAATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp ATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATTTTAACTCCAGAACTTCCTaGTTGCTTTTGCTGGGGTAT +
Preference number: 4 (lower is better)
Translates to: MHKNLMQPHLGLVFITHFNSRTS*LLLLGY
Trigger: ATACCCCAGCAAAAGCAACCAGGAAGTTCTGGAGTT...AAAATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp AACATAGAAGCAGCTAATTCTGACTACATTGAAGCAGAGCACACACAATTTGAAATATTCACTTCCCCGTaGCCTTCCATCACTTTTAAA +
Preference number: 4 (lower is better)
Translates to: NIEAANSDYIEAEHTQFEIFTSP*PSITFK
Trigger: TTTAAAAGTGATGGAAGGCCACGGGGAAGTGAATAT...TTCAAATTGTGTGTGCTCTGCTTCAATGTAGTCAGAATTAGCTGCTTCTATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
CDS-3UTR CCA 90 bp ATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATTTTCAGCGAACAATGTTCTaGTGGTTGAATTTGCTGATG +
Preference number: 4 (lower is better)
Translates to: MHKNLMQPHLGLVFITHFQRTMF*WLNLLM
Trigger: CATCAGCAAATTCAACCACCAGAACATTGTTCGCTG...AAAATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR TCA 90 bp ATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATTTTTTCGAAAGAATAGGATaGACCCATGCTCAAAACCTT +
Preference number: 4 (lower is better)
Translates to: MHKNLMQPHLGLVFITHFFERIG*THAQNL
Trigger: AAGGTTTTGAGCATGGGTTCATCCTATTCTTTCGAA...AAAATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCAT
37% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR TCA 90 bp AACATAGAAGCAGCTAATTCTGACTACATTGAAGCAGAGCACACACAATTTGAAAGAGCACACACAATTTaGAAGAAGCATAAGGAAGTA +
Preference number: 4 (lower is better)
Translates to: NIEAANSDYIEAEHTQFERAHTI*KKHKEV
Trigger: TACTTCCTTATGCTTCTTTCAAATTGTGTGTGCTCT...TTCAAATTGTGTGTGCTCTGCTTCAATGTAGTCAGAATTAGCTGCTTCTATGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR TCA 90 bp AACATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATAGAGCACACACAATTTaGAAGAAGCATAAGGAAGTA +
Preference number: 4 (lower is better)
Translates to: NMHKNLMQPHLGLVFITHRAHTI*KKHKEV
Trigger: TACTTCCTTATGCTTCTTTCAAATTGTGTGTGCTCT...ATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCATGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR GCA 90 bp AACATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATCATTGTTCTCTCCAATaGAGACTTTCTGGATTAACT +
Preference number: 4 (lower is better)
Translates to: NMHKNLMQPHLGLVFITHHCSLQ*RLSGLT
Trigger: AGTTAATCCAGAAAGTCTGCATTGGAGAGAACAATG...ATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCATGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR GCA 90 bp AACATAGAAGCAGCTAATTCTGACTACATTGAAGCAGAGCACACACAATTTGAAGGTTCATGCTATTCTTaGTTTTCAGAATGGTATCCT +
Preference number: 4 (lower is better)
Translates to: NIEAANSDYIEAEHTQFEGSCYS*FSEWYP
Trigger: AGGATACCATTCTGAAAAGCAAGAATAGCATGAACC...TTCAAATTGTGTGTGCTCTGCTTCAATGTAGTCAGAATTAGCTGCTTCTATGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CCA 90 bp ATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATTTTTTATGCAACCACATCTaGGCCTTGTATTTATCACTC +
Preference number: 4 (lower is better)
Translates to: MHKNLMQPHLGLVFITHFLCNHI*ALYLSL
Trigger: GAGTGATAAATACAAGGCCCAGATGTGGTTGCATAA...AAAATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCAT
37% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR GCA 90 bp ATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATTTTGTGTGGCTCCTTCTTTaGTATAGGATTATTCTTTTT +
Preference number: 4 (lower is better)
Translates to: MHKNLMQPHLGLVFITHFVWLLL*YRIILF
Trigger: AAAAAGAATAATCCTATAGCAAAGAAGGAGCCACAC...AAAATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCAT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS CCA 90 bp GCTTGGCACGCCGGAGCTTGCGCACGGAGCCGCCCTTCAGCACCCTaGACAGCGTCCGGGCCTCTGCCGGGGCTGGTGAACCGGCGGTCC +
Preference number: 5 (lower is better)
Translates to: AWHAGACARSRPSAP*TASGPLPGLVNRRS
Trigger: GGACCGCCGGTTCACCAGCCCCGGCAGAGGCCCGGACGCTGTCCAGGGTGCTGAAGGGCGGCTCCGTGCGCAAGCTCCGGCGTGCCAAGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS GCA 90 bp GCGGCTTTGGGTGGCCGACCAGAGGGCGGCCGGAAAGCACCTCGGTaGCCCGCGACCCTCCGAACAGAGGCGGCGGGAGGTACCAGCTGC +
Preference number: 5 (lower is better)
Translates to: AALGGRPEGGRKAPR*PATLRTEAAGGTSC
Trigger: GCAGCTGGTACCTCCCGCCGCCTCTGTTCGGAGGGTCGCGGGGCACCGAGGTGCTTTCCGGCCGCCCTCTGGTCGGCCACCCAAAGCCGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS CCA 90 bp CTTGCCGCCCCCTCCTCACCCATCATCAGCGCCCGCGGCTTTGGGTaGCCGACCAGAGGGCGGCCGGAAAGCACCTCGGTGCCCCGCGAC +
Preference number: 5 (lower is better)
Translates to: LAAPSSPIISARGFG*PTRGRPESTSVPRD
Trigger: GTCGCGGGGCACCGAGGTGCTTTCCGGCCGCCCTCTGGTCGGCCACCCAAAGCCGCGGGCGCTGATGATGGGTGAGGAGGGGGCGGCAAG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS GCA 90 bp GGGCTCACTGGCTGGGACCTTGAGCCTCCCGCTCTCCGCGCCGAGTaGCGCGCCCCCGTCTGTAGCTCGCTGCGCTCGGTACAGAGGAAC +
Preference number: 5 (lower is better)
Translates to: GLTGWDLEPPALRAE*RAPVCSSLRSVQRN
Trigger: GTTCCTCTGTACCGAGCGCAGCGAGCTACAGACGGGGGCGCGGCACTCGGCGCGGAGAGCGGGAGGCTCAAGGTCCCAGCCAGTGAGCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS GCA 90 bp CCTCCTCGCCCAGCTCCAGCACCAACTGCTTGGCACGCCGGAGCTTaGGCACGGAGCCGCCCTTCAGCACCCTGGACAGCGTCCGGGCCT +
Preference number: 5 (lower is better)
Translates to: PPRPAPAPTAWHAGA*ARSRPSAPWTASGP
Trigger: AGGCCCGGACGCTGTCCAGGGTGCTGAAGGGCGGCTCCGTGCGCAAGCTCCGGCGTGCCAAGCAGTTGGTGCTGGAGCTGGGCGAGGAGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS CCA 90 bp AAATCTTGCCGCCCCCTCCTCACCCATCATCAGCGCCCGCGGCTTTaGGTGGCCGACCAGAGGGCGGCCGGAAAGCACCTCGGTGCCCCG +
Preference number: 5 (lower is better)
Translates to: KSCRPLLTHHQRPRL*VADQRAAGKHLGAP
Trigger: CGGGGCACCGAGGTGCTTTCCGGCCGCCCTCTGGTCGGCCACCCAAAGCCGCGGGCGCTGATGATGGGTGAGGAGGGGGCGGCAAGATTT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS CCA 90 bp TCAGGGGCGAGTCCAGAGACACTCAAGCACACTGGGCTCACTGGCTaGGACCTTGAGCCTCCCGCTCTCCGCGCCGAGTGCCGCGCCCCC +
Preference number: 5 (lower is better)
Translates to: SGASPETLKHTGLTG*DLEPPALRAECRAP
Trigger: GGGGGCGCGGCACTCGGCGCGGAGAGCGGGAGGCTCAAGGTCCCAGCCAGTGAGCCCAGTGTGCTTGAGTGTCTCTGGACTCGCCCCTGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS GCA 90 bp CAGGAGCCCGATGGCTCCCATCCCGCCGGAGGAGGCCGTTTACACTaGTCTCCGGGCCCAGCCTCACCCTTCGCTCTCCCCGAGATGGGA +
Preference number: 5 (lower is better)
Translates to: QEPDGSHPAGGGRLH*SPGPASPFALPEMG
Trigger: TCCCATCTCGGGGAGAGCGAAGGGTGAGGCTGGGCCCGGAGAGCAGTGTAAACGGCCTCCTCCGGCGGGATGGGAGCCATCGGGCTCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS GCA 90 bp GGGCGTGAATCCCAGCCCCCGCGCTGCGCAAGTTTGCAGCGTCCTTaGTCTCACCGGCGCCTCGGCTCCTCAGAGTTCGCAGGCACTGGA +
Preference number: 5 (lower is better)
Translates to: GRESQPPRCASLQRP*SHRRLGSSEFAGTG
Trigger: TCCAGTGCCTGCGAACTCTGAGGAGCCGAGGCGCCGGTGAGAGCAAGGACGCTGCAAACTTGCGCAGCGCGGGGGCTGGGATTCACGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS GCA 90 bp CTTCTGCCCGGTCTGGGCGGGAACCGAGGGCGGAGGCTGCCGTCTTaGGCACCCTCAAGCTATCTCTCCGCTGCGGGAAGGCTTCGGACT +
Preference number: 5 (lower is better)
Translates to: LLPGLGGNRGRRLPS*APSSYLSAAGRLRT
Trigger: AGTCCGAAGCCTTCCCGCAGCGGAGAGATAGCTTGAGGGTGCGCAAGACGGCAGCCTCCGCCCTCGGTTCCCGCCCAGACCGGGCAGAAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS GCA 90 bp TCCAAGCTCTTCTGCCCGGTCTGGGCGGGAACCGAGGGCGGAGGCTaGCGTCTTGCGCACCCTCAAGCTATCTCTCCGCTGCGGGAAGGC +
Preference number: 5 (lower is better)
Translates to: SKLFCPVWAGTEGGG*RLAHPQAISPLREG
Trigger: GCCTTCCCGCAGCGGAGAGATAGCTTGAGGGTGCGCAAGACGGCAGCCTCCGCCCTCGGTTCCCGCCCAGACCGGGCAGAAGAGCTTGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS GCA 90 bp ACGCAACCCTCCAAGATCGCCTCCTCGCCCAGCTCCAGCACCAACTaGTTGGCACGCCGGAGCTTGCGCACGGAGCCGCCCTTCAGCACC +
Preference number: 5 (lower is better)
Translates to: TQPSKIASSPSSSTN*LARRSLRTEPPFST
Trigger: GGTGCTGAAGGGCGGCTCCGTGCGCAAGCTCCGGCGTGCCAAGCAGTTGGTGCTGGAGCTGGGCGAGGAGGCGATCTTGGAGGGTTGCGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS GCA 90 bp GGCGGGGCTGGGAGGCGCGAATTGCCGCGGACAGCCTTCCCTCTCTaGCCACTTCCGACGCCTTCTTCTCGGGCATCAGGCGGATCCTCA +
Preference number: 5 (lower is better)
Translates to: GGAGRRELPRTAFPL*PLPTPSSRASGGSS
Trigger: TGAGGATCCGCCTGATGCCCGAGAAGAAGGCGTCGGAAGTGGGCAGAGAGGGAAGGCTGTCCGCGGCAATTCGCGCCTCCCAGCCCCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS CCA 90 bp AACCCTCCAAGATCGCCTCCTCGCCCAGCTCCAGCACCAACTGCTTaGCACGCCGGAGCTTGCGCACGGAGCCGCCCTTCAGCACCCTGG +
Preference number: 5 (lower is better)
Translates to: NPPRSPPRPAPAPTA*HAGACARSRPSAPW
Trigger: CCAGGGTGCTGAAGGGCGGCTCCGTGCGCAAGCTCCGGCGTGCCAAGCAGTTGGTGCTGGAGCTGGGCGAGGAGGCGATCTTGGAGGGTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS GCA 90 bp GTCCTGGCCGCCTTTTGCGTTCCTTTTGGCTCCTCCAAGCTCTTCTaGCCGGTCTGGGCGGGAACCGAGGGCGGAGGCTGCCGTCTTGCG +
Preference number: 5 (lower is better)
Translates to: VLAAFCVPFGSSKLF*PVWAGTEGGGCRLA
Trigger: CGCAAGACGGCAGCCTCCGCCCTCGGTTCCCGCCCAGACCGGGCAGAAGAGCTTGGAGGAGCCAAAAGGAACGCAAAAGGCGGCCAGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS GCA 90 bp CTCCCGCTCTCCGCGCCGAGTGCCGCGCCCCCGTCTGTAGCTCGCTaGGCTCGGTACAGAGGAACTACTATGGTTGAAGGGAGGTGGCAG +
Preference number: 5 (lower is better)
Translates to: LPLSAPSAAPPSVAR*ARYRGTTMVEGRWQ
Trigger: CTGCCACCTCCCTTCAACCATAGTAGTTCCTCTGTACCGAGCGCAGCGAGCTACAGACGGGGGCGCGGCACTCGGCGCGGAGAGCGGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS GCA 90 bp GCTGAACTTCTGGGCGTGAATCCCAGCCCCCGCGCTGCGCAAGTTTaGAGCGTCCTTGCTCTCACCGGCGCCTCGGCTCCTCAGAGTTCG +
Preference number: 5 (lower is better)
Translates to: AELLGVNPSPRAAQV*SVLALTGASAPQSS
Trigger: CGAACTCTGAGGAGCCGAGGCGCCGGTGAGAGCAAGGACGCTGCAAACTTGCGCAGCGCGGGGGCTGGGATTCACGCCCAGAAGTTCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS GCA 90 bp GAGAACGGCGGCTCCCAGCTGCTGCACGCTGTCCTGGCCGCCTTTTaGGTTCCTTTTGGCTCCTCCAAGCTCTTCTGCCCGGTCTGGGCG +
Preference number: 5 (lower is better)
Translates to: ENGGSQLLHAVLAAF*VPFGSSKLFCPVWA
Trigger: CGCCCAGACCGGGCAGAAGAGCTTGGAGGAGCCAAAAGGAACGCAAAAGGCGGCCAGGACAGCGTGCAGCAGCTGGGAGCCGCCGTTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS CCA 90 bp CTCCCAGCTGCTGCACGCTGTCCTGGCCGCCTTTTGCGTTCCTTTTaGCTCCTCCAAGCTCTTCTGCCCGGTCTGGGCGGGAACCGAGGG +
Preference number: 5 (lower is better)
Translates to: LPAAARCPGRLLRSF*LLQALLPGLGGNRG
Trigger: CCCTCGGTTCCCGCCCAGACCGGGCAGAAGAGCTTGGAGGAGCCAAAAGGAACGCAAAAGGCGGCCAGGACAGCGTGCAGCAGCTGGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS CCA 90 bp ATCTCCTTAGAACGCTCTGCCCCAGGCCCATCCAGCAAGTCCATCTaGGAGGCCTCCTCGGAGGGGATGCGGCGCCAGGACCAGCTCTGG +
Preference number: 5 (lower is better)
Translates to: ISLERSAPGPSSKSI*EASSEGMRRQDQLW
Trigger: CCAGAGCTGGTCCTGGCGCCGCATCCCCTCCGAGGAGGCCTCCCAGATGGACTTGCTGGATGGGCCTGGGGCAGAGCGTTCTAAGGAGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS TCA 90 bp GCTGCGGGAAGGCTTCGGACTGTCTGCCTGCTGAACTTCTGGGCGTaGATCCCAGCCCCCGCGCTGCGCAAGTTTGCAGCGTCCTTGCTC +
Preference number: 5 (lower is better)
Translates to: AAGRLRTVCLLNFWA*IPAPALRKFAASLL
Trigger: GAGCAAGGACGCTGCAAACTTGCGCAGCGCGGGGGCTGGGATTCACGCCCAGAAGTTCAGCAGGCAGACAGTCCGAAGCCTTCCCGCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS GCA 90 bp AGGGCGGAGGCTGCCGTCTTGCGCACCCTCAAGCTATCTCTCCGCTaGGGGAAGGCTTCGGACTGTCTGCCTGCTGAACTTCTGGGCGTG +
Preference number: 5 (lower is better)
Translates to: RAEAAVLRTLKLSLR*GKASDCLPAELLGV
Trigger: CACGCCCAGAAGTTCAGCAGGCAGACAGTCCGAAGCCTTCCCGCAGCGGAGAGATAGCTTGAGGGTGCGCAAGACGGCAGCCTCCGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS GCA 90 bp GTCCCGGGCGTAGACACGGAAGAGCGAGGGCACCACGAAGTCAACTaGCAGACTCTTCCTCTGCAGGCGCGAGTAGCTGAGTGGCTCCCG +
Preference number: 5 (lower is better)
Translates to: VPGVDTEERGHHEVN*QTLPLQARVAEWLP
Trigger: CGGGAGCCACTCAGCTACTCGCGCCTGCAGAGGAAGAGTCTGGCAGTTGACTTCGTGGTGCCCTCGCTCTTCCGTGTCTACGCCCGGGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS GCA 90 bp GCCTCGTTGTGGGGCAGCAGCTGGGCAATGTACCTTCCAGAGGGCTaGAGGTGCCTGTGCACCGAGACGGCCAGTGTGCAGTGCTCACTG +
Preference number: 5 (lower is better)
Translates to: ASLWGSSWAMYLPEG*RCLCTETASVQCSL
Trigger: CAGTGAGCACTGCACACTGGCCGTCTCGGTGCACAGGCACCTGCAGCCCTCTGGAAGGTACATTGCCCAGCTGCTGCCCCACAACGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS GCA 90 bp CCGAGATGCTGTAGGTGTCGGTGGCTGGCACCTTCCAGATCTGGATaGCTTTCAGGGGGCCCTCGCTCCCCACCTCCACGCTCAGGTTGG +
Preference number: 5 (lower is better)
Translates to: PRCCRCRWLAPSRSG*LSGGPRSPPPRSGW
Trigger: CCAACCTGAGCGTGGAGGTGGGGAGCGAGGGCCCCCTGAAAGGCATCCAGATCTGGAAGGTGCCAGCCACCGACACCTACAGCATCTCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS GCA 90 bp CTCCATCTGCATGGCTTGCAGCTCCTGGTGCTTCCGGCGGTACACTaGAGGTGGGTGGTCAGCTGCAACATGGCCTGGCAGCCTGGCCCT +
Preference number: 5 (lower is better)
Translates to: LHLHGLQLLVLPAVH*RWVVSCNMAWQPGP
Trigger: AGGGCCAGGCTGCCAGGCCATGTTGCAGCTGACCACCCACCTGCAGTGTACCGCCGGAAGCACCAGGAGCTGCAAGCCATGCAGATGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642122.1
CDS CCA 90 bp GCCTTTTGCGTTCCTTTTGGCTCCTCCAAGCTCTTCTGCCCGGTCTaGGCGGGAACCGAGGGCGGAGGCTGCCGTCTTGCGCACCCTCAA +
Preference number: 5 (lower is better)
Translates to: AFCVPFGSSKLFCPV*AGTEGGGCRLAHPQ
Trigger: TTGAGGGTGCGCAAGACGGCAGCCTCCGCCCTCGGTTCCCGCCCAGACCGGGCAGAAGAGCTTGGAGGAGCCAAAAGGAACGCAAAAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS TCA 90 bp GGGCCCAGCCTCACCCTTCGCTCTCCCCGAGATGGGAAGAGGCTCTaGACAGTCCTTGGTACCCAGCGGCTCCTTCCACCTGATCTCCAG +
Preference number: 5 (lower is better)
Translates to: GPSLTLRSPRDGKRL*TVLGTQRLLPPDLQ
Trigger: CTGGAGATCAGGTGGAAGGAGCCGCTGGGTACCAAGGACTGTTCAGAGCCTCTTCCCATCTCGGGGAGAGCGAAGGGTGAGGCTGGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS GCA 90 bp CCAGAGGGCTGCAGGTGCCTGTGCACCGAGACGGCCAGTGTGCAGTaGTCACTGCTGCTCCTCATCCACGGACTCAGGATGGTGTGCTTG +
Preference number: 5 (lower is better)
Translates to: PEGCRCLCTETASVQ*SLLLLIHGLRMVCL
Trigger: CAAGCACACCATCCTGAGTCCGTGGATGAGGAGCAGCAGTGAGCACTGCACACTGGCCGTCTCGGTGCACAGGCACCTGCAGCCCTCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS GCA 90 bp TTGTGGGGCAGCAGCTGGGCAATGTACCTTCCAGAGGGCTGCAGGTaGCTGTGCACCGAGACGGCCAGTGTGCAGTGCTCACTGCTGCTC +
Preference number: 5 (lower is better)
Translates to: LWGSSWAMYLPEGCR*LCTETASVQCSLLL
Trigger: GAGCAGCAGTGAGCACTGCACACTGGCCGTCTCGGTGCACAGGCACCTGCAGCCCTCTGGAAGGTACATTGCCCAGCTGCTGCCCCACAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS CCA 90 bp TACACTGCTCTCCGGGCCCAGCCTCACCCTTCGCTCTCCCCGAGATaGGAAGAGGCTCTGAACAGTCCTTGGTACCCAGCGGCTCCTTCC +
Preference number: 5 (lower is better)
Translates to: YTALRAQPHPSLSPR*EEALNSPWYPAAPS
Trigger: GGAAGGAGCCGCTGGGTACCAAGGACTGTTCAGAGCCTCTTCCCATCTCGGGGAGAGCGAAGGGTGAGGCTGGGCCCGGAGAGCAGTGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS CCA 90 bp ATCTGGGAGGCCTCCTCGGAGGGGATGCGGCGCCAGGACCAGCTCTaGTTCCTGAGGTCATGCAGTGGAGGGGAATACTCCAGCTCACAG +
Preference number: 5 (lower is better)
Translates to: IWEASSEGMRRQDQL*FLRSCSGGEYSSSQ
Trigger: CTGTGAGCTGGAGTATTCCCCTCCACTGCATGACCTCAGGAACCAGAGCTGGTCCTGGCGCCGCATCCCCTCCGAGGAGGCCTCCCAGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CAA 90 bp CTCTCCTCCACGGTCTTAGGGATCCCAAGGAAGAGAAGTGAGTGTGCGACCGAGTTGGCACGCCGGAGCTaGCGCACGGAGCCGCCCTTC +
Preference number: 5 (lower is better)
Translates to: LSSTVLGIPRKRSECATELARRS*RTEPPF
Trigger: GAAGGGCGGCTCCGTGCGCAAGCTCCGGCGTGCCAA...CTCGGTCGCACACTCACTTCTCTTCCTTGGGATCCCTAAGACCGTGGAGGAGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS TCA 90 bp CAAGCTATCTCTCCGCTGCGGGAAGGCTTCGGACTGTCTGCCTGCTaGACTTCTGGGCGTGAATCCCAGCCCCCGCGCTGCGCAAGTTTG +
Preference number: 5 (lower is better)
Translates to: QAISPLREGFGLSAC*TSGRESQPPRCASL
Trigger: CAAACTTGCGCAGCGCGGGGGCTGGGATTCACGCCCAGAAGTTCAGCAGGCAGACAGTCCGAAGCCTTCCCGCAGCGGAGAGATAGCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS GCA 90 bp GCAGGTGCCTGTGCACCGAGACGGCCAGTGTGCAGTGCTCACTGCTaGTCCTCATCCACGGACTCAGGATGGTGTGCTTGGAGTCAGCTG +
Preference number: 5 (lower is better)
Translates to: AGACAPRRPVCSAHC*SSSTDSGWCAWSQL
Trigger: CAGCTGACTCCAAGCACACCATCCTGAGTCCGTGGATGAGGAGCAGCAGTGAGCACTGCACACTGGCCGTCTCGGTGCACAGGCACCTGC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS GCA 90 bp GCTGCAGGTGCCTGTGCACCGAGACGGCCAGTGTGCAGTGCTCACTaGTGCTCCTCATCCACGGACTCAGGATGGTGTGCTTGGAGTCAG +
Preference number: 5 (lower is better)
Translates to: AAGACAPRRPVCSAH*CSSSTDSGWCAWSQ
Trigger: CTGACTCCAAGCACACCATCCTGAGTCCGTGGATGAGGAGCAGCAGTGAGCACTGCACACTGGCCGTCTCGGTGCACAGGCACCTGCAGC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS GCA 90 bp ACCTTCCAGAGGGCTGCAGGTGCCTGTGCACCGAGACGGCCAGTGTaGAGTGCTCACTGCTGCTCCTCATCCACGGACTCAGGATGGTGT +
Preference number: 5 (lower is better)
Translates to: TFQRAAGACAPRRPV*SAHCCSSSTDSGWC
Trigger: ACACCATCCTGAGTCCGTGGATGAGGAGCAGCAGTGAGCACTGCACACTGGCCGTCTCGGTGCACAGGCACCTGCAGCCCTCTGGAAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS CCA 90 bp TGGTGCTTCCGGCGGTACACTGCAGGTGGGTGGTCAGCTGCAACATaGCCTGGCAGCCTGGCCCTTGAAGCACTACACAGGCCACTTCCT +
Preference number: 5 (lower is better)
Translates to: WCFRRYTAGGWSAAT*PGSLALEALHRPLP
Trigger: AGGAAGTGGCCTGTGTAGTGCTTCAAGGGCCAGGCTGCCAGGCCATGTTGCAGCTGACCACCCACCTGCAGTGTACCGCCGGAAGCACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642122.1
CDS CCA 90 bp ATGGCTTGCAGCTCCTGGTGCTTCCGGCGGTACACTGCAGGTGGGTaGTCAGCTGCAACATGGCCTGGCAGCCTGGCCCTTGAAGCACTA +
Preference number: 5 (lower is better)
Translates to: MACSSWCFRRYTAGG*SAATWPGSLALEAL
Trigger: TAGTGCTTCAAGGGCCAGGCTGCCAGGCCATGTTGCAGCTGACCACCCACCTGCAGTGTACCGCCGGAAGCACCAGGAGCTGCAAGCCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642122.1
CDS-3UTR CAA 90 bp CTCTCCTCCACGGTCTTAGGGATCCCAAGGAAGAGAAGTGAGTGTGCGACCGAGTCACTGGCTGGGACCTaGAGCCTCCCGCTCTCCGCG +
Preference number: 5 (lower is better)
Translates to: LSSTVLGIPRKRSECATESLAGT*SLPLSA
Trigger: CGCGGAGAGCGGGAGGCTCAAGGTCCCAGCCAGTGA...CTCGGTCGCACACTCACTTCTCTTCCTTGGGATCCCTAAGACCGTGGAGGAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS-3UTR CAA 90 bp GAGCTCCAGCAGGATGAACCGGGGCAGGGATTGCAGGCTCACCCCAATGCAGCGCCGAAGTCTCCAATCTaGGCCACTCTTCCAGGGCCT +
Preference number: 5 (lower is better)
Translates to: ELQQDEPGQGLQAHPNAAPKSPI*ATLPGP
Trigger: AGGCCCTGGAAGAGTGGCCAAGATTGGAGACTTCGG...CGCTGCATTGGGGTGAGCCTGCAATCCCTGCCCCGGTTCATCCTGCTGGAGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431873.6
CDS CCA 90 bp GGTACACTGCAGGTGGGTGGTCAGCTGCAACATGGCCTGGCAGCCTaGCCCTTGAAGCACTACACAGGCCACTTCCTACAGGAAGCCTCC +
Preference number: 5 (lower is better)
Translates to: GTLQVGGQLQHGLAA*PLKHYTGHFLQEAS
Trigger: GGAGGCTTCCTGTAGGAAGTGGCCTGTGTAGTGCTTCAAGGGCCAGGCTGCCAGGCCATGTTGCAGCTGACCACCCACCTGCAGTGTACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642122.1
CDS-3UTR CAA 90 bp GCCATTGCCTCTCTCTCCTCCACGGTCTTAGGGATCCCAAGGAAGAGAAGTGAGGGCCCAGGGCAGTTCTaGGGTGGGTCCATCCGGCCT +
Preference number: 5 (lower is better)
Translates to: AIASLSSTVLGIPRKRSEGPGQF*GGSIRP
Trigger: AGGCCGGATGGACCCACCCAAGAACTGCCCTGGGCC...CTCACTTCTCTTCCTTGGGATCCCTAAGACCGTGGAGGAGAGAGAGGCAATGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CAA 90 bp GGGATCCCAAGGAAGAGAAGTGAGTGTGCGACCGAGCTCAGGGCCCAGGCTGGTGCTCCTCCTCCCGTTTaGCCTGTTGAGAGACCAGGA +
Preference number: 5 (lower is better)
Translates to: GIPRKRSECATELRAQAGAPPPV*PVERPG
Trigger: TCCTGGTCTCTCAACAGGCAAAACGGGAGGAGGAGC...ACCAGCCTGGGCCCTGAGCTCGGTCGCACACTCACTTCTCTTCCTTGGGATCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431873.6
CDS-3UTR CAA 90 bp TGGCAGTCAGCGAAGAGGGCTCTAGGAGCAGTGAGGCCCCCGGAAGTCTCCCAGGGTACCTCCTTCATATaGGCAGTCAGCGAAGAGGGC +
Preference number: 5 (lower is better)
Translates to: WQSAKRALGAVRPPEVSQGTSFI*AVSEEG
Trigger: GCCCTCTTCGCTGACTGCCAATATGAAGGAGGTACC...CTGGGAGACTTCCGGGGGCCTCACTGCTCCTAGAGCCCTCTTCGCTGACTGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431873.6
CDS TCA 90 bp TGGTGGTCCTGGAACCGGGCATCCTTTAGGGTCCTGACCTGCCATTaGGGAGTGTGGGGTGACAGTGTGCCTTGGGTCCAGCCACAGAAG +
Preference number: 5 (lower is better)
Translates to: WWSWNRASFRVLTCH*GVWGDSVPWVQPQK
Trigger: CTTCTGTGGCTGGACCCAAGGCACACTGTCACCCCACACTCCTCAATGGCAGGTCAGGACCCTAAAGGATGCCCGGTTCCAGGACCACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS GCA 90 bp TTGCTCAGCTTGTACTCAGGGCTCTGCAGCTCCATCTGCATGGCTTaGAGCTCCTGGTGCTTCCGGCGGTACACTGCAGGTGGGTGGTCA +
Preference number: 5 (lower is better)
Translates to: LLSLYSGLCSSICMA*SSWCFRRYTAGGWS
Trigger: TGACCACCCACCTGCAGTGTACCGCCGGAAGCACCAGGAGCTGCAAGCCATGCAGATGGAGCTGCAGAGCCCTGAGTACAAGCTGAGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642122.1
CDS-3UTR CAA 90 bp TGGCAGTCAGCGAAGAGGGCTCTAGGAGCAGTGAGGCCCCCGGAAGTCTCCCAGCAGAAGCAGATGACCTaGTGGCTTTCAGGGTCCATG +
Preference number: 5 (lower is better)
Translates to: WQSAKRALGAVRPPEVSQQKQMT*WLSGSM
Trigger: CATGGACCCTGAAAGCCACAAGGTCATCTGCTTCTG...CTGGGAGACTTCCGGGGGCCTCACTGCTCCTAGAGCCCTCTTCGCTGACTGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431873.6
CDS-3UTR CAA 90 bp GCCATTGCCTCTCTCTCCTCCACGGTCTTAGGGATCCCAAGGAAGAGAAGTGAGCCACTTGCAGGGGGCTaGGGTCGTTGGGCATTCCGG +
Preference number: 5 (lower is better)
Translates to: AIASLSSTVLGIPRKRSEPLAGG*GRWAFR
Trigger: CCGGAATGCCCAACGACCCAAGCCCCCTGCAAGTGG...CTCACTTCTCTTCCTTGGGATCCCTAAGACCGTGGAGGAGAGAGAGGCAATGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CAA 90 bp TGGCAGTCAGCGAAGAGGGCTCTAGGAGCAGTGAGGCCCCCGGAAGTCTCCCAGTCCAGAACTTCCTGGTaGCTTTTGCTGGGGTATGGC +
Preference number: 5 (lower is better)
Translates to: WQSAKRALGAVRPPEVSQSRTSW*LLLGYG
Trigger: GCCATACCCCAGCAAAAGCAACCAGGAAGTTCTGGA...CTGGGAGACTTCCGGGGGCCTCACTGCTCCTAGAGCCCTCTTCGCTGACTGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000431873.6
CDS-3UTR CAA 90 bp CGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCACGGGCCCAGGGCAGTTCTaGGGTGGGTCCATCCGGCCT +
Preference number: 5 (lower is better)
Translates to: RDIWSLVCEGAIASLSSTGPGQF*GGSIRP
Trigger: AGGCCGGATGGACCCACCCAAGAACTGCCCTGGGCC...CGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CAA 90 bp ATATTGGCAGTCAGCGAAGAGGGCTCTAGGAGCAGTGAGGCCCCCGGAAGTCTCCTGGATCCGTGGACCTaGTGCAACTCCGAAGGAGGG +
Preference number: 5 (lower is better)
Translates to: ILAVSEEGSRSSEAPGSLLDPWT*CNSEGG
Trigger: CCCTCCTTCGGAGTTGCACAAGGTCCACGGATCCAG...GAGACTTCCGGGGGCCTCACTGCTCCTAGAGCCCTCTTCGCTGACTGCCAATAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431873.6
CDS TCA 90 bp GCAGGCTCCACAGGAGTTCCATTTGCAGGAGAGTGGCTGGAGCTGTaGGGATGTTGCTCAGGCACTTGGGTGAGGAAGTGTCTCAGGGGG +
Preference number: 5 (lower is better)
Translates to: AGSTGVPFAGEWLEL*GCCSGTWVRKCLRG
Trigger: CCCCCTGAGACACTTCCTCACCCAAGTGCCTGAGCAACATCCTCACAGCTCCAGCCACTCTCCTGCAAATGGAACTCCTGTGGAGCCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453137.1
CDS CCA 90 bp GCCTTCTTCTCGGGCATCAGGCGGATCCTCAGTCGCCCTTCGCCTTaGCGAATCCACCAACTGAACAGCTCGCTGAGATTGAACTGGAGC +
Preference number: 5 (lower is better)
Translates to: AFFSGIRRILSRPSP*RIHQLNSSLRLNWS
Trigger: GCTCCAGTTCAATCTCAGCGAGCTGTTCAGTTGGTGGATTCGCCAAGGCGAAGGGCGACTGAGGATCCGCCTGATGCCCGAGAAGAAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS CCA 90 bp GGGTCCCGGGCTGAGCCTAAACCCAGAATCTTGCTGGTGAGCAGGTaGGAAGAACCACAGCAGGCTCCACAGGAGTTCCATTTGCAGGAG +
Preference number: 5 (lower is better)
Translates to: GSRAEPKPRILLVSR*EEPQQAPQEFHLQE
Trigger: CTCCTGCAAATGGAACTCCTGTGGAGCCTGCTGTGGTTCTTCCCACCTGCTCACCAGCAAGATTCTGGGTTTAGGCTCAGCCCGGGACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453137.1
CDS-3UTR CAA 90 bp ACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCAGCGCCCGCGGCTTaGGGTGGCCGACCAGAGGGC +
Preference number: 5 (lower is better)
Translates to: TKRDIWSLVCEGAIASLSSAPAA*GGRPEG
Trigger: GCCCTCTGGTCGGCCACCCAAAGCCGCGGGCGCTGA...GGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS-3UTR CAA 90 bp GCCATTGCCTCTCTCTCCTCCACGGTCTTAGGGATCCCAAGGAAGAGAAGTGAGGCGGAGGCTGCCGTCTaGCGCACCCTCAAGCTATCT +
Preference number: 5 (lower is better)
Translates to: AIASLSSTVLGIPRKRSEAEAAV*RTLKLS
Trigger: AGATAGCTTGAGGGTGCGCAAGACGGCAGCCTCCGC...CTCACTTCTCTTCCTTGGGATCCCTAAGACCGTGGAGGAGAGAGAGGCAATGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS-3UTR CAA 90 bp CTCTCCTCCACGGTCTTAGGGATCCCAAGGAAGAGAAGTGAGTGTGCGACCGAGCCTGCGGCTCCGGAATaGCCGTTTAGCCCTAGAACC +
Preference number: 5 (lower is better)
Translates to: LSSTVLGIPRKRSECATEPAAPE*PFSPRT
Trigger: GGTTCTAGGGCTAAACGGCAATTCCGGAGCCGCAGG...CTCGGTCGCACACTCACTTCTCTTCCTTGGGATCCCTAAGACCGTGGAGGAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CAA 90 bp CTCTCCTCCACGGTCTTAGGGATCCCAAGGAAGAGAAGTGAGTGTGCGACCGAGCTCCGAAACCCCCTCTaGTCTCCCACCCCCACTTCT +
Preference number: 5 (lower is better)
Translates to: LSSTVLGIPRKRSECATELRNPL*SPTPTS
Trigger: AGAAGTGGGGGTGGGAGACAAGAGGGGGTTTCGGAG...CTCGGTCGCACACTCACTTCTCTTCCTTGGGATCCCTAAGACCGTGGAGGAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CAA 90 bp CGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCACGAGGGGGCTTGGGTCGTaGGGCATTCCGGACACCTGG +
Preference number: 5 (lower is better)
Translates to: RDIWSLVCEGAIASLSSTRGLGS*GIPDTW
Trigger: CCAGGTGTCCGGAATGCCCAACGACCCAAGCCCCCT...CGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CAA 90 bp TGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCACGGTCTTAGGGACCCCCTCAGGGTCCTaGGGCCTCACAGGCACTTTC +
Preference number: 5 (lower is better)
Translates to: WSLVCEGAIASLSSTVLGTPSGS*GLTGTF
Trigger: GAAAGTGCCTGTGAGGCCCAAGGACCCTGAGGGGGT...CCCTAAGACCGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CAA 90 bp CTCTCCTCCACGGTCTTAGGGATCCCAAGGAAGAGAAGTGAGTGTGCGACCGAGACCAGGAGCCGTACGTaGGGTTCCACAAGCTGGTGG +
Preference number: 5 (lower is better)
Translates to: LSSTVLGIPRKRSECATETRSRT*GSTSWW
Trigger: CCACCAGCTTGTGGAACCCAACGTACGGCTCCTGGT...CTCGGTCGCACACTCACTTCTCTTCCTTGGGATCCCTAAGACCGTGGAGGAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS GCA 90 bp TGTCCAACCATGCTTCCCTGGAGTGGGCATCAGGAGGATCTCTCTTaGAGCCTCGTTGTGGGGCAGCAGCTGGGCAATGTACCTTCCAGA +
Preference number: 5 (lower is better)
Translates to: CPTMLPWSGHQEDLS*SLVVGQQLGNVPSR
Trigger: TCTGGAAGGTACATTGCCCAGCTGCTGCCCCACAACGAGGCTGCAAGAGAGATCCTCCTGATGCCCACTCCAGGGAAGCATGGTTGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS GCA 90 bp GCCACAGGCTCAAGCCTTCATAGGCGGCGACATGCCAGACCATCCTaGCTTGCTCCTTCCCGGTTTTGTTCTCCACTAGCACCAAGGACA +
Preference number: 5 (lower is better)
Translates to: ATGSSLHRRRHARPS*LAPSRFCSPLAPRT
Trigger: TGTCCTTGGTGCTAGTGGAGAACAAAACCGGGAAGGAGCAAGGCAGGATGGTCTGGCATGTCGCCGCCTATGAAGGCTTGAGCCTGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389048.8
ENST00000498037.1
ENST00000618119.4
CDS GCA 90 bp TTGCTCAGCTTGTACTCAGGGCTCTGCAGCTCCATCTGCATGGCTTaGAGCTCCTGGTGCTTCCGGCGGTACACAATCATGATGCCGGAG +
Preference number: 5 (lower is better)
Translates to: LLSLYSGLCSSICMA*SSWCFRRYTIMMPE
Trigger: CTCCGGCATCATGATTGTGTACCGCCGGAAGCACCAGGAGCTGCAAGCCATGCAGATGGAGCTGCAGAGCCCTGAGTACAAGCTGAGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS GCA 90 bp TTGCTCAGCTTGTACTCAGGGCTCTGCAGCTCCATCTGCATGGCTTaGAGCTCCTGGTGCTTCCGGCGGTACACCGCTATGTGCTCAGTT +
Preference number: 5 (lower is better)
Translates to: LLSLYSGLCSSICMA*SSWCFRRYTAMCSV
Trigger: AACTGAGCACATAGCGGTGTACCGCCGGAAGCACCAGGAGCTGCAAGCCATGCAGATGGAGCTGCAGAGCCCTGAGTACAAGCTGAGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431873.6
CDS-3UTR CAA 90 bp TGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCACGGTCTTAGGGGTCGAGGTGCGGAGCTaGCTCAGCTTGTACTCAGGG +
Preference number: 5 (lower is better)
Translates to: WSLVCEGAIASLSSTVLGVEVRS*LSLYSG
Trigger: CCCTGAGTACAAGCTGAGCAAGCTCCGCACCTCGAC...CCCTAAGACCGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CAA 90 bp GCCATTGCCTCTCTCTCCTCCACGGTCTTAGGGATCCCAAGGAAGAGAAGTGAGCGTCTTCACAGCCACTaGCAGGGGGCTTGGGTCGTT +
Preference number: 5 (lower is better)
Translates to: AIASLSSTVLGIPRKRSERLHSH*QGAWVV
Trigger: AACGACCCAAGCCCCCTGCAAGTGGCTGTGAAGACG...CTCACTTCTCTTCCTTGGGATCCCTAAGACCGTGGAGGAGAGAGAGGCAATGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CAA 90 bp CGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCACGGAACCGGGGCAGGGATaGCAGGCTCACCCCAATGCA +
Preference number: 5 (lower is better)
Translates to: RDIWSLVCEGAIASLSSTEPGQG*QAHPNA
Trigger: TGCATTGGGGTGAGCCTGCAATCCCTGCCCCGGTTC...CGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS TCA 90 bp AGACGCCATCCTCAGCCAGCACCGTCCCGTGGTCACAGAAGCAGATaGCCTTGTGGCTTTCAGGGTCCATGTGACATTCGTCTACCTCAC +
Preference number: 5 (lower is better)
Translates to: RRHPQPAPSRGHRSR*PCGFQGPCDIRLPH
Trigger: GTGAGGTAGACGAATGTCACATGGACCCTGAAAGCCACAAGGTCATCTGCTTCTGTGACCACGGGACGGTGCTGGCTGAGGATGGCGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
CDS GCA 90 bp TGCATGGCTTGCAGCTCCTGGTGCTTCCGGCGGTACACCGCTATGTaGTCAGTTCCCTCCTCTATGCAATGGACCGACCGTGATCAGATT +
Preference number: 5 (lower is better)
Translates to: CMACSSWCFRRYTAM*SVPSSMQWTDRDQI
Trigger: AATCTGATCACGGTCGGTCCATTGCATAGAGGAGGGAACTGAGCACATAGCGGTGTACCGCCGGAAGCACCAGGAGCTGCAAGCCATGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431873.6
CDS CCA 90 bp CAAGCTGCGGTTTCCACTGGAGATGTATTCCAGGGCCACTCGAAATaGGTTGTCTGGACGCCCGATTCTTCCCTGGAGCACTGTCCAACC +
Preference number: 5 (lower is better)
Translates to: QAAVSTGDVFQGHSK*VVWTPDSSLEHCPT
Trigger: GGTTGGACAGTGCTCCAGGGAAGAATCGGGCGTCCAGACAACCCATTTCGAGTGGCCCTGGAATACATCTCCAGTGGAAACCGCAGCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CAA 90 bp ACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCGCTGGGAGGCGCGAATaGCCGCGGACAGCCTTCCCT +
Preference number: 5 (lower is better)
Translates to: TKRDIWSLVCEGAIASLSAGRRE*PRTAFP
Trigger: AGGGAAGGCTGTCCGCGGCAATTCGCGCCTCCCAGC...GGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS-3UTR CAA 90 bp TGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCACGGTCTTAGGGTCAGGAGGATCTCTCTaGCAGCCTCGTTGTGGGGCA +
Preference number: 5 (lower is better)
Translates to: WSLVCEGAIASLSSTVLGSGGSL*QPRCGA
Trigger: TGCCCCACAACGAGGCTGCAAGAGAGATCCTCCTGA...CCCTAAGACCGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CAA 90 bp CGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCACGCTCCGAAACCCCCTCTaGTCTCCCACCCCCACTTCT +
Preference number: 5 (lower is better)
Translates to: RDIWSLVCEGAIASLSSTLRNPL*SPTPTS
Trigger: AGAAGTGGGGGTGGGAGACAAGAGGGGGTTTCGGAG...CGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CAA 90 bp TGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCACGGTCTTAGGGCCGAAGTCTCCAATCTaGGCCACTCTTCCAGGGCCT +
Preference number: 5 (lower is better)
Translates to: WSLVCEGAIASLSSTVLGPKSPI*ATLPGP
Trigger: AGGCCCTGGAAGAGTGGCCAAGATTGGAGACTTCGG...CCCTAAGACCGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CAA 90 bp ACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCGGCCCAGGGCAGTTCTaGGGTGGGTCCATCCGGCCT +
Preference number: 5 (lower is better)
Translates to: TKRDIWSLVCEGAIASLSGPGQF*GGSIRP
Trigger: AGGCCGGATGGACCCACCCAAGAACTGCCCTGGGCC...GGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CAA 90 bp CAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTGGCCCAGGGCAGTTCTaGGGTGGGTCCATCCGGCCT +
Preference number: 5 (lower is better)
Translates to: QNVTFGLWFVKEPLPLSPGPGQF*GGSIRP
Trigger: AGGCCGGATGGACCCACCCAAGAACTGCCCTGGGCC...AGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CAA 90 bp CTCTCCTCCACGGTCTTAGGGATCCCAAGGAAGAGAAGTGAGTGTGCGACCGAGATCGGCAAAGCGGTGTaGATTACATCCGGGTCCTGG +
Preference number: 5 (lower is better)
Translates to: LSSTVLGIPRKRSECATEIGKAV*ITSGSW
Trigger: CCAGGACCCGGATGTAATCAACACCGCTTTGCCGAT...CTCGGTCGCACACTCACTTCTCTTCCTTGGGATCCCTAAGACCGTGGAGGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CAA 90 bp TGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCACGGTCTTAGGGCACAAGCTGGTGGGCTaGTTTCTGGATCCGTGGACC +
Preference number: 5 (lower is better)
Translates to: WSLVCEGAIASLSSTVLGHKLVG*FLDPWT
Trigger: GGTCCACGGATCCAGAAACAAGCCCACCAGCTTGTG...CCCTAAGACCGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CAA 90 bp CTCTCCTCCACGGTCTTAGGGATCCCAAGGAAGAGAAGTGAGTGTGCGACCGAGGGTACCTCCTTCATATaGGCAGTCAGCGAAGAGGGC +
Preference number: 5 (lower is better)
Translates to: LSSTVLGIPRKRSECATEGTSFI*AVSEEG
Trigger: GCCCTCTTCGCTGACTGCCAATATGAAGGAGGTACC...CTCGGTCGCACACTCACTTCTCTTCCTTGGGATCCCTAAGACCGTGGAGGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS TCA 90 bp TCTCTTGCTTTCCCCCAACTGCACGGAGGCGAGCAGGAGTCTAAATaGAACAGACCTGGAAGCTCAGGGGCGAGTCCAGAGACACTCAAG +
Preference number: 5 (lower is better)
Translates to: SLAFPQLHGGEQESK*NRPGSSGASPETLK
Trigger: CTTGAGTGTCTCTGGACTCGCCCCTGAGCTTCCAGGTCTGTTTCATTTAGACTCCTGCTCGCCTCCGTGCAGTTGGGGGAAAGCAAGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS TCA 90 bp GCTGCTCCTCATCCACGGACTCAGGATGGTGTGCTTGGAGTCAGCTaGGGTGTTGAGAAGGAGAAAGGAGCCTCTGGGCATCTCCTTAGA +
Preference number: 5 (lower is better)
Translates to: AAPHPRTQDGVLGVS*GVEKEKGASGHLLR
Trigger: TCTAAGGAGATGCCCAGAGGCTCCTTTCTCCTTCTCAACACCTCAGCTGACTCCAAGCACACCATCCTGAGTCCGTGGATGAGGAGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS TCA 90 bp CAGGAGAGTGGCTGGAGCTGTGAGGATGTTGCTCAGGCACTTGGGTaGGGAAGTGTCTCAGGGGGCAGGAGAGTGTCTTTCTCAGATACT +
Preference number: 5 (lower is better)
Translates to: QESGWSCEDVAQALG*GSVSGGRRVSFSDT
Trigger: AGTATCTGAGAAAGACACTCTCCTGCCCCCTGAGACACTTCCTCACCCAAGTGCCTGAGCAACATCCTCACAGCTCCAGCCACTCTCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000453137.1
CDS GCA 90 bp TTCTTCATGGCCTGGGGGCAGGAATGTCCTCCGGTGGCACCCTCCTaGAAAGATTTTCCGGCCCAGAGCAAGGAAGTGTTATCATTCCAG +
Preference number: 5 (lower is better)
Translates to: FFMAWGQECPPVAPS*KDFPAQSKEVLSFQ
Trigger: CTGGAATGATAACACTTCCTTGCTCTGGGCCGGAAAATCTTTGCAGGAGGGTGCCACCGGAGGACATTCCTGCCCCCAGGCCATGAAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS GCA 90 bp TTGCTCAGCTTGTACTCAGGGCTCTGCAGCTCCATCTGCATGGCTTaGAGCTCCTGGTGCTTCCGGCGGTACACTGAGGATCGAATGAAT +
Preference number: 5 (lower is better)
Translates to: LLSLYSGLCSSICMA*SSWCFRRYTEDRMN
Trigger: ATTCATTCGATCCTCAGTGTACCGCCGGAAGCACCAGGAGCTGCAAGCCATGCAGATGGAGCTGCAGAGCCCTGAGTACAAGCTGAGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638605.1
CDS CCA 90 bp GTTTCCACTGGAGATGTATTCCAGGGCCACTCGAAATGGGTTGTCTaGACGCCCGATTCTTCCCTGGAGCACTGTCCAACCATGCTTCCC +
Preference number: 5 (lower is better)
Translates to: VSTGDVFQGHSKWVV*TPDSSLEHCPTMLP
Trigger: GGGAAGCATGGTTGGACAGTGCTCCAGGGAAGAATCGGGCGTCCAGACAACCCATTTCGAGTGGCCCTGGAATACATCTCCAGTGGAAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS CCA 90 bp CTCAGGGGGCAGGAGAGTGTCTTTCTCAGATACTGGTGCGTGGACTaGGTGCTAGAATTCATGGTCGATTTCTCCCAGGAAGGCCTCAGG +
Preference number: 5 (lower is better)
Translates to: LRGQESVFLRYWCVD*VLEFMVDFSQEGLR
Trigger: CCTGAGGCCTTCCTGGGAGAAATCGACCATGAATTCTAGCACCCAGTCCACGCACCAGTATCTGAGAAAGACACTCTCCTGCCCCCTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000453137.1
CDS-3UTR CAA 90 bp TGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCACGGTCTTAGGGCTCAGGATGGTGTGCTaGGAGTCAGCTGAGGTGTTG +
Preference number: 5 (lower is better)
Translates to: WSLVCEGAIASLSSTVLGLRMVC*ESAEVL
Trigger: CAACACCTCAGCTGACTCCAAGCACACCATCCTGAG...CCCTAAGACCGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CAA 90 bp CGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCACGGATGGCTCTGGATCCTaGTCCCCACCATGCGACCAT +
Preference number: 5 (lower is better)
Translates to: RDIWSLVCEGAIASLSSTDGSGS*SPPCDH
Trigger: ATGGTCGCATGGTGGGGACAAGGATCCAGAGCCATC...CGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CAA 90 bp ACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCAGGGGGCTTGGGTCGTaGGGCATTCCGGACACCTGG +
Preference number: 5 (lower is better)
Translates to: TKRDIWSLVCEGAIASLSRGLGS*GIPDTW
Trigger: CCAGGTGTCCGGAATGCCCAACGACCCAAGCCCCCT...GGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CAA 90 bp CAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCACTTGCAGGGGGCTaGGGTCGTTGGGCATTCCGG +
Preference number: 5 (lower is better)
Translates to: QNVTFGLWFVKEPLPLSPPLAGG*GRWAFR
Trigger: CCGGAATGCCCAACGACCCAAGCCCCCTGCAAGTGG...AGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CAA 90 bp CTACAATGTATAAAGGCATTCTGTAAACATGGGCAGCAGGGGTCCCGGGCTGAGCGTCTTCACAGCCACTaGCAGGGGGCTTGGGTCGTT +
Preference number: 5 (lower is better)
Translates to: LQCIKAFCKHGQQGSRAERLHSH*QGAWVV
Trigger: AACGACCCAAGCCCCCTGCAAGTGGCTGTGAAGACG...CTCAGCCCGGGACCCCTGCTGCCCATGTTTACAGAATGCCTTTATACATTGTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453137.1
CDS-3UTR CAA 90 bp TGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCACGGTCTTAGGGATCGGCAAAGCGGTGTaGATTACATCCGGGTCCTGG +
Preference number: 5 (lower is better)
Translates to: WSLVCEGAIASLSSTVLGIGKAV*ITSGSW
Trigger: CCAGGACCCGGATGTAATCAACACCGCTTTGCCGAT...CCCTAAGACCGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CAA 90 bp GCCATTGCCTCTCTCTCCTCCACGGTCTTAGGGATCCCAAGGAAGAGAAGTGAGATCGGCAAAGCGGTGTaGATTACATCCGGGTCCTGG +
Preference number: 5 (lower is better)
Translates to: AIASLSSTVLGIPRKRSEIGKAV*ITSGSW
Trigger: CCAGGACCCGGATGTAATCAACACCGCTTTGCCGAT...CTCACTTCTCTTCCTTGGGATCCCTAAGACCGTGGAGGAGAGAGAGGCAATGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CAA 90 bp TGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCACGGTCTTAGGGTTTGTGAAGGAGCCATaGCCTCTCTCTCCTCCACGG +
Preference number: 5 (lower is better)
Translates to: WSLVCEGAIASLSSTVLGFVKEP*PLSPPR
Trigger: CCGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAA...CCCTAAGACCGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS CCA 90 bp TCTTCAGGGCAAAGAAGTCCACTGCAGACAAGCTGCGGTTTCCACTaGAGATGTATTCCAGGGCCACTCGAAATGGGTTGTCTGGACGCC +
Preference number: 5 (lower is better)
Translates to: SSGQRSPLQTSCGFH*RCIPGPLEMGCLDA
Trigger: GGCGTCCAGACAACCCATTTCGAGTGGCCCTGGAATACATCTCCAGTGGAAACCGCAGCTTGTCTGCAGTGGACTTCTTTGCCCTGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CAA 90 bp CGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCACGCCAGACCATCCTGCCTaGCTCCTTCCCGGTTTTGTT +
Preference number: 5 (lower is better)
Translates to: RDIWSLVCEGAIASLSSTPDHPA*LLPGFV
Trigger: AACAAAACCGGGAAGGAGCAAGGCAGGATGGTCTGG...CGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CAA 90 bp GCCATTGCCTCTCTCTCCTCCACGGTCTTAGGGATCCCAAGGAAGAGAAGTGAGTCCATTTCGGGGTCATaGTTTGAGGCTGCATTGCCG +
Preference number: 5 (lower is better)
Translates to: AIASLSSTVLGIPRKRSESISGS*FEAALP
Trigger: CGGCAATGCAGCCTCAAACAATGACCCCGAAATGGA...CTCACTTCTCTTCCTTGGGATCCCTAAGACCGTGGAGGAGAGAGAGGCAATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CAA 90 bp TGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCACGGTCTTAGGGCAGAAGCAGATGACCTaGTGGCTTTCAGGGTCCATG +
Preference number: 5 (lower is better)
Translates to: WSLVCEGAIASLSSTVLGQKQMT*WLSGSM
Trigger: CATGGACCCTGAAAGCCACAAGGTCATCTGCTTCTG...CCCTAAGACCGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
CDS-3UTR CAA 90 bp TGGCACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCCCACTTGCAGGGGGCTaGGGTCGTTGGGCATTCCGG +
Preference number: 5 (lower is better)
Translates to: WHKTKRDIWSLVCEGAIAPLAGG*GRWAFR
Trigger: CCGGAATGCCCAACGACCCAAGCCCCCTGCAAGTGG...GGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGTGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CAA 90 bp CAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTGAACCGGGGCAGGGATaGCAGGCTCACCCCAATGCA +
Preference number: 5 (lower is better)
Translates to: QNVTFGLWFVKEPLPLSPEPGQG*QAHPNA
Trigger: TGCATTGGGGTGAGCCTGCAATCCCTGCCCCGGTTC...AGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CAA 90 bp ACATCCGGGTCCTGGGTGCAGTATTCAATCCTCTCCAAAATGATGGCAAAGTTGGAACCGGGGCAGGGATaGCAGGCTCACCCCAATGCA +
Preference number: 5 (lower is better)
Translates to: TSGSWVQYSILSKMMAKLEPGQG*QAHPNA
Trigger: TGCATTGGGGTGAGCCTGCAATCCCTGCCCCGGTTC...CAACTTTGCCATCATTTTGGAGAGGATTGAATACTGCACCCAGGACCCGGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000431873.6
CDS-3UTR CAA 90 bp TGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCACGGTCTTAGGGTCCAGAACTTCCTGGTaGCTTTTGCTGGGGTATGGC +
Preference number: 5 (lower is better)
Translates to: WSLVCEGAIASLSSTVLGSRTSW*LLLGYG
Trigger: GCCATACCCCAGCAAAAGCAACCAGGAAGTTCTGGA...CCCTAAGACCGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CAA 90 bp ACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCACCCCCTCAGGGTCCTaGGGCCTCACAGGCACTTTC +
Preference number: 5 (lower is better)
Translates to: TKRDIWSLVCEGAIASLSTPSGS*GLTGTF
Trigger: GAAAGTGCCTGTGAGGCCCAAGGACCCTGAGGGGGT...GGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CAA 90 bp CAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTACCCCCTCAGGGTCCTaGGGCCTCACAGGCACTTTC +
Preference number: 5 (lower is better)
Translates to: QNVTFGLWFVKEPLPLSPTPSGS*GLTGTF
Trigger: GAAAGTGCCTGTGAGGCCCAAGGACCCTGAGGGGGT...AGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CAA 90 bp CGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCACGGGTACCTCCTTCATATaGGCAGTCAGCGAAGAGGGC +
Preference number: 5 (lower is better)
Translates to: RDIWSLVCEGAIASLSSTGTSFI*AVSEEG
Trigger: GCCCTCTTCGCTGACTGCCAATATGAAGGAGGTACC...CGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS CCA 90 bp GTGAGGAAGTGTCTCAGGGGGCAGGAGAGTGTCTTTCTCAGATACTaGTGCGTGGACTGGGTGCTAGAATTCATGGTCGATTTCTCCCAG +
Preference number: 5 (lower is better)
Translates to: VRKCLRGQESVFLRY*CVDWVLEFMVDFSQ
Trigger: CTGGGAGAAATCGACCATGAATTCTAGCACCCAGTCCACGCACCAGTATCTGAGAAAGACACTCTCCTGCCCCCTGAGACACTTCCTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000453137.1
CDS-3UTR CAA 90 bp CGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCACGGAGGAACTACTATGGTaGAAGGGAGGTGGCAGTTGG +
Preference number: 5 (lower is better)
Translates to: RDIWSLVCEGAIASLSSTEELLW*KGGGSW
Trigger: CCAACTGCCACCTCCCTTCAACCATAGTAGTTCCTC...CGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS-3UTR CAA 90 bp CAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTGTGCGCGCAAGTCTCTaGCTTTCCCCCAACTGCACG +
Preference number: 5 (lower is better)
Translates to: QNVTFGLWFVKEPLPLSPVRASL*LSPNCT
Trigger: CGTGCAGTTGGGGGAAAGCAAGAGACTTGCGCGCAC...AGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS-3UTR CAA 90 bp GCCATTGCCTCTCTCTCCTCCACGGTCTTAGGGATCCCAAGGAAGAGAAGTGAGTCACATGGAGAGCTCTaGATCGGTGCAGGAAACGTA +
Preference number: 5 (lower is better)
Translates to: AIASLSSTVLGIPRKRSESHGEL*IGAGNV
Trigger: TACGTTTCCTGCACCGATCAAGAGCTCTCCATGTGA...CTCACTTCTCTTCCTTGGGATCCCTAAGACCGTGGAGGAGAGAGAGGCAATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CAA 90 bp GCCATTGCCTCTCTCTCCTCCACGGTCTTAGGGATCCCAAGGAAGAGAAGTGAGGTATTCTGCAGGATCTaGTCCTCTCCGCTAATGGTG +
Preference number: 5 (lower is better)
Translates to: AIASLSSTVLGIPRKRSEVFCRI*SSPLMV
Trigger: CACCATTAGCGGAGAGGACAAGATCCTGCAGAATAC...CTCACTTCTCTTCCTTGGGATCCCTAAGACCGTGGAGGAGAGAGAGGCAATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CAA 90 bp CGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCACGTCATCCTTCTCCAGGTaGAAGATGCCCAGCACAGAC +
Preference number: 5 (lower is better)
Translates to: RDIWSLVCEGAIASLSSTSSFSR*KMPSTD
Trigger: GTCTGTGCTGGGCATCTTCAACCTGGAGAAGGATGA...CGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CAA 90 bp TGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCACGGTCTTAGGGTTGTTTGAGGCTGCATaGCCGCCTATATATCCTCCG +
Preference number: 5 (lower is better)
Translates to: WSLVCEGAIASLSSTVLGLFEAA*PPIYPP
Trigger: CGGAGGATATATAGGCGGCAATGCAGCCTCAAACAA...CCCTAAGACCGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CAA 90 bp CGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCACGTTTCGGGGTCATTGTTaGAGGCTGCATTGCCGCCTA +
Preference number: 5 (lower is better)
Translates to: RDIWSLVCEGAIASLSSTFRGHC*RLHCRL
Trigger: TAGGCGGCAATGCAGCCTCAAACAATGACCCCGAAA...CGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CAA 90 bp ACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCACCAGGAGCCGTACGTaGGGTTCCACAAGCTGGTGG +
Preference number: 5 (lower is better)
Translates to: TKRDIWSLVCEGAIASLSTRSRT*GSTSWW
Trigger: CCACCAGCTTGTGGAACCCAACGTACGGCTCCTGGT...GGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS GCA 90 bp CTTCACTGCAGTTCTTCAGGGCAAAGAAGTCCACTGCAGACAAGCTaGGGTTTCCACTGGAGATGTATTCCAGGGCCACTCGAAATGGGT +
Preference number: 5 (lower is better)
Translates to: LHCSSSGQRSPLQTS*GFHWRCIPGPLEMG
Trigger: ACCCATTTCGAGTGGCCCTGGAATACATCTCCAGTGGAAACCGCAGCTTGTCTGCAGTGGACTTCTTTGCCCTGAAGAACTGCAGTGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS GCA 90 bp AGGAAGTGTCTCAGGGGGCAGGAGAGTGTCTTTCTCAGATACTGGTaGGTGGACTGGGTGCTAGAATTCATGGTCGATTTCTCCCAGGAA +
Preference number: 5 (lower is better)
Translates to: RKCLRGQESVFLRYW*VDWVLEFMVDFSQE
Trigger: TTCCTGGGAGAAATCGACCATGAATTCTAGCACCCAGTCCACGCACCAGTATCTGAGAAAGACACTCTCCTGCCCCCTGAGACACTTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000453137.1
CDS-3UTR CAA 90 bp ACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCAAGTTTGCAGCGTCCTaGCTCTCACCGGCGCCTCGG +
Preference number: 5 (lower is better)
Translates to: TKQNVTFGLWFVKEPLPLKFAAS*LSPAPR
Trigger: CCGAGGCGCCGGTGAGAGCAAGGACGCTGCAAACTT...GAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS-3UTR CAA 90 bp ACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCCCGCGCTGCGCAAGTTaGCAGCGTCCTTGCTCTCAC +
Preference number: 5 (lower is better)
Translates to: TKQNVTFGLWFVKEPLPLPRCAS*QRPCSH
Trigger: GTGAGAGCAAGGACGCTGCAAACTTGCGCAGCGCGG...GAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS-3UTR CAA 90 bp CAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTTGTCCTGGCCGCCTTTaGCGTTCCTTTTGGCTCCTC +
Preference number: 5 (lower is better)
Translates to: QNVTFGLWFVKEPLPLSPCPGRL*RSFWLL
Trigger: GAGGAGCCAAAAGGAACGCAAAAGGCGGCCAGGACA...AGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS-3UTR CAA 90 bp ACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCGAAGGGAGGTGGCAGTaGGGTACCGTCCTCTCCTGC +
Preference number: 5 (lower is better)
Translates to: TKQNVTFGLWFVKEPLPLEGRWQ*GTVLSC
Trigger: GCAGGAGAGGACGGTACCCAACTGCCACCTCCCTTC...GAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS-3UTR CAA 90 bp CTCTCCTCCACGGTCTTAGGGATCCCAAGGAAGAGAAGTGAGTGTGCGACCGAGGAGAAGGCATGTTTGTaGGTGATTCCAAGGAGCTAT +
Preference number: 5 (lower is better)
Translates to: LSSTVLGIPRKRSECATEEKACL*VIPRSY
Trigger: ATAGCTCCTTGGAATCACCAACAAACATGCCTTCTC...CTCGGTCGCACACTCACTTCTCTTCCTTGGGATCCCTAAGACCGTGGAGGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CAA 90 bp TGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCACGGTCTTAGGGAAGGAGAAGGCATGTTaGTTGGTGATTCCAAGGAGC +
Preference number: 5 (lower is better)
Translates to: WSLVCEGAIASLSSTVLGKEKAC*LVIPRS
Trigger: GCTCCTTGGAATCACCAACAAACATGCCTTCTCCTT...CCCTAAGACCGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CAA 90 bp TGGCACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCCGTCTTCACAGCCACTaGCAGGGGGCTTGGGTCGTT +
Preference number: 5 (lower is better)
Translates to: WHKTKRDIWSLVCEGAIARLHSH*QGAWVV
Trigger: AACGACCCAAGCCCCCTGCAAGTGGCTGTGAAGACG...GGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGTGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CAA 90 bp GTTTTTCCGCGGCACCTCCTTCAGGTCACTGATGGAGGAGGTCTTGCCAGCAAATTCTGGTGGTTGAATTaGCTGATGATCAGGGCTTCC +
Preference number: 5 (lower is better)
Translates to: VFPRHLLQVTDGGGLASKFWWLN*LMIRAS
Trigger: GGAAGCCCTGATCATCAGCAAATTCAACCACCAGAA...TTTGCTGGCAAGACCTCCTCCATCAGTGACCTGAAGGAGGTGCCGCGGAAAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431873.6
CDS-3UTR CAA 90 bp CCACAAGCTGGTGGGCTTGTTTCTGGATCCGTGGACCTTGTGCAACTCCGAAGGACTTCCTGGTTGCTTTaGCTGGGGTATGGCATATAT +
Preference number: 5 (lower is better)
Translates to: PQAGGLVSGSVDLVQLRRTSWLL*LGYGIY
Trigger: ATATATGCCATACCCCAGCAAAAGCAACCAGGAAGT...CCTTCGGAGTTGCACAAGGTCCACGGATCCAGAAACAAGCCCACCAGCTTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431873.6
CDS-3UTR CAA 90 bp CAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTGCTCCTCCTCCCGTTTaGCCTGTTGAGAGACCAGGA +
Preference number: 5 (lower is better)
Translates to: QNVTFGLWFVKEPLPLSPAPPPV*PVERPG
Trigger: TCCTGGTCTCTCAACAGGCAAAACGGGAGGAGGAGC...AGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CAA 90 bp TGGCACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCCTGGATCCGTGGACCTaGTGCAACTCCGAAGGAGGG +
Preference number: 5 (lower is better)
Translates to: WHKTKRDIWSLVCEGAIALDPWT*CNSEGG
Trigger: CCCTCCTTCGGAGTTGCACAAGGTCCACGGATCCAG...GGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CAA 90 bp ACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCCACAAGCTGGTGGGCTaGTTTCTGGATCCGTGGACC +
Preference number: 5 (lower is better)
Translates to: TKRDIWSLVCEGAIASLSHKLVG*FLDPWT
Trigger: GGTCCACGGATCCAGAAACAAGCCCACCAGCTTGTG...GGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS TCA 90 bp CTCCATCTGCATGGCTTGCAGCTCCTGGTGCTTCCGGCGGTACACTaGGGATCGAATGAATTGAAATGTGTAAATTGCCGAGCACGTAGT +
Preference number: 5 (lower is better)
Translates to: LHLHGLQLLVLPAVH*GSNELKCVNCRARS
Trigger: ACTACGTGCTCGGCAATTTACACATTTCAATTCATTCGATCCTCAGTGTACCGCCGGAAGCACCAGGAGCTGCAAGCCATGCAGATGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638605.1
CDS-3UTR CAA 90 bp TGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCACGGTCTTAGGGGAGAAGGCATGTTTGTaGGTGATTCCAAGGAGCTAT +
Preference number: 5 (lower is better)
Translates to: WSLVCEGAIASLSSTVLGEKACL*VIPRSY
Trigger: ATAGCTCCTTGGAATCACCAACAAACATGCCTTCTC...CCCTAAGACCGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CAA 90 bp AAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCGTCGAGGTGCGGAGCTaGCTCAGCTTGTACTCAGGG +
Preference number: 5 (lower is better)
Translates to: KTKRDIWSLVCEGAIASLVEVRS*LSLYSG
Trigger: CCCTGAGTACAAGCTGAGCAAGCTCCGCACCTCGAC...GAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CAA 90 bp CTGGGAGGAACAGGATACAAAGTTACATTTTCAGCAGCTACAATGTATAAAGGCAGGGGGCTTGGGTCGTaGGGCATTCCGGACACCTGG +
Preference number: 5 (lower is better)
Translates to: LGGTGYKVTFSAATMYKGRGLGS*GIPDTW
Trigger: CCAGGTGTCCGGAATGCCCAACGACCCAAGCCCCCT...GCCTTTATACATTGTAGCTGCTGAAAATGTAACTTTGTATCCTGTTCCTCCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453137.1
CDS-3UTR CAA 90 bp AAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCCGTCTTCACAGCCACTaGCAGGGGGCTTGGGTCGTT +
Preference number: 5 (lower is better)
Translates to: KTKRDIWSLVCEGAIASLRLHSH*QGAWVV
Trigger: AACGACCCAAGCCCCCTGCAAGTGGCTGTGAAGACG...GAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CAA 90 bp TGGCACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCCCGAAGTCTCCAATCTaGGCCACTCTTCCAGGGCCT +
Preference number: 5 (lower is better)
Translates to: WHKTKRDIWSLVCEGAIAPKSPI*ATLPGP
Trigger: AGGCCCTGGAAGAGTGGCCAAGATTGGAGACTTCGG...GGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CAA 90 bp CGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCACGGTCTTCAGGCTGATGTaGCCAGCACTGAGTCATTAT +
Preference number: 5 (lower is better)
Translates to: RDIWSLVCEGAIASLSSTVFRLM*PALSHY
Trigger: ATAATGACTCAGTGCTGGCAACATCAGCCTGAAGAC...CGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CAA 90 bp TGGCACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCCTCCCGTTTTGCCTGTaGAGAGACCAGGAGAGGAGG +
Preference number: 5 (lower is better)
Translates to: WHKTKRDIWSLVCEGAIALPFCL*RDQERR
Trigger: CCTCCTCTCCTGGTCTCTCAACAGGCAAAACGGGAG...GGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CAA 90 bp ACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCCTGGATCCGTGGACCTaGTGCAACTCCGAAGGAGGG +
Preference number: 5 (lower is better)
Translates to: TKQNVTFGLWFVKEPLPLLDPWT*CNSEGG
Trigger: CCCTCCTTCGGAGTTGCACAAGGTCCACGGATCCAG...GAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CAA 90 bp TGGCACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCCACAAGCTGGTGGGCTaGTTTCTGGATCCGTGGACC +
Preference number: 5 (lower is better)
Translates to: WHKTKRDIWSLVCEGAIAHKLVG*FLDPWT
Trigger: GGTCCACGGATCCAGAAACAAGCCCACCAGCTTGTG...GGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CAA 90 bp ACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCACCAGGAGCCGTACGTaGGGTTCCACAAGCTGGTGG +
Preference number: 5 (lower is better)
Translates to: TKQNVTFGLWFVKEPLPLTRSRT*GSTSWW
Trigger: CCACCAGCTTGTGGAACCCAACGTACGGCTCCTGGT...GAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CAA 90 bp ACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCGGTACCTCCTTCATATaGGCAGTCAGCGAAGAGGGC +
Preference number: 5 (lower is better)
Translates to: TKRDIWSLVCEGAIASLSGTSFI*AVSEEG
Trigger: GCCCTCTTCGCTGACTGCCAATATGAAGGAGGTACC...GGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CAA 90 bp CAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTTGCTCCTTCCCGGTTTaGTTCTCCACTAGCACCAAG +
Preference number: 5 (lower is better)
Translates to: QNVTFGLWFVKEPLPLSPCSFPV*FSTSTK
Trigger: CTTGGTGCTAGTGGAGAACAAAACCGGGAAGGAGCA...AGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CAA 90 bp AAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCGATGGCTCTGGATCCTaGTCCCCACCATGCGACCAT +
Preference number: 5 (lower is better)
Translates to: KTKRDIWSLVCEGAIASLDGSGS*SPPCDH
Trigger: ATGGTCGCATGGTGGGGACAAGGATCCAGAGCCATC...GAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CAA 90 bp CGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCACGGTTTCAGCTCCTTGTTaGGGTTTCTCTCAAACAGGT +
Preference number: 5 (lower is better)
Translates to: RDIWSLVCEGAIASLSSTVSAPC*GFSQTG
Trigger: ACCTGTTTGAGAGAAACCCAAACAAGGAGCTGAAAC...CGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CAA 90 bp ACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCATTTCGGGGTCATaGTTTGAGGCTGCATTGCCG +
Preference number: 5 (lower is better)
Translates to: TKRDIWSLVCEGAIASLSSISGS*FEAALP
Trigger: CGGCAATGCAGCCTCAAACAATGACCCCGAAATGGA...GGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CAA 90 bp TCCCATAGCAGCACTCCAAAGGACCATGTGTCTGTTTTAGAAGTGAATATTCCTGTCGAGGTGCGGAGCTaGCTCAGCTTGTACTCAGGG +
Preference number: 5 (lower is better)
Translates to: SHSSTPKDHVSVLEVNIPVEVRS*LSLYSG
Trigger: CCCTGAGTACAAGCTGAGCAAGCTCCGCACCTCGAC...AGGAATATTCACTTCTAAAACAGACACATGGTCCTTTGGAGTGCTGCTATGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431873.6
CDS-3UTR CAA 90 bp TGGGAGGAACAGGATACAAAGTTACATTTTCAGCAGCTACAATGTATAAAGGCACCACTTGCAGGGGGCTaGGGTCGTTGGGCATTCCGG +
Preference number: 5 (lower is better)
Translates to: WEEQDTKLHFQQLQCIKAPLAGG*GRWAFR
Trigger: CCGGAATGCCCAACGACCCAAGCCCCCTGCAAGTGG...TGCCTTTATACATTGTAGCTGCTGAAAATGTAACTTTGTATCCTGTTCCTCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453137.1
CDS-3UTR CAA 90 bp AAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCCCGAAGTCTCCAATCTaGGCCACTCTTCCAGGGCCT +
Preference number: 5 (lower is better)
Translates to: KTKRDIWSLVCEGAIASLPKSPI*ATLPGP
Trigger: AGGCCCTGGAAGAGTGGCCAAGATTGGAGACTTCGG...GAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CAA 90 bp CGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCACGACTTCCTGGTTGCTTTaGCTGGGGTATGGCATATAT +
Preference number: 5 (lower is better)
Translates to: RDIWSLVCEGAIASLSSTTSWLL*LGYGIY
Trigger: ATATATGCCATACCCCAGCAAAAGCAACCAGGAAGT...CGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CAA 90 bp AAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCCTCCCGTTTTGCCTGTaGAGAGACCAGGAGAGGAGG +
Preference number: 5 (lower is better)
Translates to: KTKRDIWSLVCEGAIASLLPFCL*RDQERR
Trigger: CCTCCTCTCCTGGTCTCTCAACAGGCAAAACGGGAG...GAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CAA 90 bp AAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCGCTCCTCCTCCCGTTTaGCCTGTTGAGAGACCAGGA +
Preference number: 5 (lower is better)
Translates to: KTKRDIWSLVCEGAIASLAPPPV*PVERPG
Trigger: TCCTGGTCTCTCAACAGGCAAAACGGGAGGAGGAGC...GAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CAA 90 bp TGGCACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTTTGTGAAGGAGCCATaGCCTCTCTCTCCTCCACGG +
Preference number: 5 (lower is better)
Translates to: WHKTKRDIWSLVCEGAIAFVKEP*PLSPPR
Trigger: CCGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAA...GGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CAA 90 bp CCACAAGCTGGTGGGCTTGTTTCTGGATCCGTGGACCTTGTGCAACTCCGAAGGCTAATTCTGACTACATaGAAGCAGAGCACACACAAT +
Preference number: 5 (lower is better)
Translates to: PQAGGLVSGSVDLVQLRRLILTT*KQSTHN
Trigger: ATTGTGTGTGCTCTGCTTCAATGTAGTCAGAATTAG...CCTTCGGAGTTGCACAAGGTCCACGGATCCAGAAACAAGCCCACCAGCTTGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431873.6
CDS TCA 90 bp AGCAATAGAGCATGGTTTCTTATATTTTCTAAGCATGGCTCTGCCTaGAAATCTGGGAGAACAGGGGCTCCCATCCACACGTGGTGGTGG +
Preference number: 5 (lower is better)
Translates to: SNRAWFLIFSKHGSA*KSGRTGAPIHTWWW
Trigger: CCACCACCACGTGTGGATGGGAGCCCCTGTTCTCCCAGATTTTCAGGCAGAGCCATGCTTAGAAAATATAAGAAACCATGCTCTATTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498037.1
CDS-3UTR CAA 90 bp AACATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATTCCAGCACCAACTGCTaGGCACGCCGGAGCTTGCGC +
Preference number: 5 (lower is better)
Translates to: NMHKNLMQPHLGLVFITHSSTNC*ARRSLR
Trigger: GCGCAAGCTCCGGCGTGCCAAGCAGTTGGTGCTGGA...ATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCATGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS-3UTR CAA 90 bp AAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCGCCACTCGAAATGGGTaGTCTGGACGCCCGATTCTT +
Preference number: 5 (lower is better)
Translates to: KTKRDIWSLVCEGAIASLATRNG*SGRPIL
Trigger: AAGAATCGGGCGTCCAGACAACCCATTTCGAGTGGC...GAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CAA 90 bp AAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCCCAGACCATCCTGCCTaGCTCCTTCCCGGTTTTGTT +
Preference number: 5 (lower is better)
Translates to: KTKRDIWSLVCEGAIASLPDHPA*LLPGFV
Trigger: AACAAAACCGGGAAGGAGCAAGGCAGGATGGTCTGG...GAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CAA 90 bp CAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCGGGTTTCAGCTCCTaGTTTGGGTTTCTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: QNVTFGLWFVKEPLPLSPPGFSS*FGFLSN
Trigger: GTTTGAGAGAAACCCAAACAAGGAGCTGAAACCCGG...AGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CAA 90 bp ACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCCCGGGTTTCAGCTCCTaGTTTGGGTTTCTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: TKRDIWSLVCEGAIASLSPGFSS*FGFLSN
Trigger: GTTTGAGAGAAACCCAAACAAGGAGCTGAAACCCGG...GGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CAA 90 bp TGGCACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCCAGAAGCAGATGACCTaGTGGCTTTCAGGGTCCATG +
Preference number: 5 (lower is better)
Translates to: WHKTKRDIWSLVCEGAIAQKQMT*WLSGSM
Trigger: CATGGACCCTGAAAGCCACAAGGTCATCTGCTTCTG...GGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
CDS-3UTR CAA 90 bp ACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCATCGGCAAAGCGGTGTaGATTACATCCGGGTCCTGG +
Preference number: 5 (lower is better)
Translates to: TKQNVTFGLWFVKEPLPLIGKAV*ITSGSW
Trigger: CCAGGACCCGGATGTAATCAACACCGCTTTGCCGAT...GAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CAA 90 bp ACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTTTGTGAAGGAGCCATaGCCTCTCTCTCCTCCACGG +
Preference number: 5 (lower is better)
Translates to: TKQNVTFGLWFVKEPLPLFVKEP*PLSPPR
Trigger: CCGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAA...GAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS TCA 90 bp CCCGGGTTTCAGCTCCTTGTTTGGGTTTCTCTCAAACAGGTTTCTTaGTTTGGGTGCTGTATTCTGCAGGATCTTGTCCTCTCCGCTAAT +
Preference number: 5 (lower is better)
Translates to: PGFQLLVWVSLKQVS*FGCCILQDLVLSAN
Trigger: ATTAGCGGAGAGGACAAGATCCTGCAGAATACAGCACCCAAATCAAGAAACCTGTTTGAGAGAAACCCAAACAAGGAGCTGAAACCCGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CAA 90 bp ACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTGCTCCTTCCCGGTTTaGTTCTCCACTAGCACCAAG +
Preference number: 5 (lower is better)
Translates to: TKQNVTFGLWFVKEPLPLCSFPV*FSTSTK
Trigger: CTTGGTGCTAGTGGAGAACAAAACCGGGAAGGAGCA...GAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CAA 90 bp ACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCAGGCTGATGGAGATATaGTCAAAAGCCACGATGGCT +
Preference number: 5 (lower is better)
Translates to: TKRDIWSLVCEGAIASLSRLMEI*SKATMA
Trigger: AGCCATCGTGGCTTTTGACAATATCTCCATCAGCCT...GGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CAA 90 bp ACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCATCCTTCTCCAGGTaGAAGATGCCCAGCACAGAC +
Preference number: 5 (lower is better)
Translates to: TKQNVTFGLWFVKEPLPLSSFSR*KMPSTD
Trigger: GTCTGTGCTGGGCATCTTCAACCTGGAGAAGGATGA...GAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CAA 90 bp ACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTTTCGGGGTCATTGTTaGAGGCTGCATTGCCGCCTA +
Preference number: 5 (lower is better)
Translates to: TKQNVTFGLWFVKEPLPLFRGHC*RLHCRL
Trigger: TAGGCGGCAATGCAGCCTCAAACAATGACCCCGAAA...GAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CAA 90 bp ATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATTTTAGGGGGCTTGGGTCGTaGGGCATTCCGGACACCTGG +
Preference number: 5 (lower is better)
Translates to: MHKNLMQPHLGLVFITHFRGLGS*GIPDTW
Trigger: CCAGGTGTCCGGAATGCCCAACGACCCAAGCCCCCT...AAAATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CAA 90 bp ATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATTTTCCACTTGCAGGGGGCTaGGGTCGTTGGGCATTCCGG +
Preference number: 5 (lower is better)
Translates to: MHKNLMQPHLGLVFITHFPLAGG*GRWAFR
Trigger: CCGGAATGCCCAACGACCCAAGCCCCCTGCAAGTGG...AAAATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CAA 90 bp CAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTTTCTGGTGGTTGAATTaGCTGATGATCAGGGCTTCC +
Preference number: 5 (lower is better)
Translates to: QNVTFGLWFVKEPLPLSPFWWLN*LMIRAS
Trigger: GGAAGCCCTGATCATCAGCAAATTCAACCACCAGAA...AGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CAA 90 bp ACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTTCTGGTGGTTGAATTaGCTGATGATCAGGGCTTCC +
Preference number: 5 (lower is better)
Translates to: TKRDIWSLVCEGAIASLSFWWLN*LMIRAS
Trigger: GGAAGCCCTGATCATCAGCAAATTCAACCACCAGAA...GGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CAA 90 bp CGGGTCCTGGGTGCAGTATTCAATCCTCTCCAAAATGATGGCAAAGTTGGGCCTACAATGTTCTGGTGGTaGAATTTGCTGATGATCAGG +
Preference number: 5 (lower is better)
Translates to: RVLGAVFNPLQNDGKVGPTMFWW*NLLMIR
Trigger: CCTGATCATCAGCAAATTCAACCACCAGAACATTGT...AGGCCCAACTTTGCCATCATTTTGGAGAGGATTGAATACTGCACCCAGGACCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431873.6
CDS-3UTR CAA 90 bp AACATAGAAGCAGCTAATTCTGACTACATTGAAGCAGAGCACACACAATTTGAAGAACCGGGGCAGGGATaGCAGGCTCACCCCAATGCA +
Preference number: 5 (lower is better)
Translates to: NIEAANSDYIEAEHTQFEEPGQG*QAHPNA
Trigger: TGCATTGGGGTGAGCCTGCAATCCCTGCCCCGGTTC...TTCAAATTGTGTGTGCTCTGCTTCAATGTAGTCAGAATTAGCTGCTTCTATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CAA 90 bp AAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCAGAACTTCCTGGTaGCTTTTGCTGGGGTATGGC +
Preference number: 5 (lower is better)
Translates to: KTKRDIWSLVCEGAIASLSRTSW*LLLGYG
Trigger: GCCATACCCCAGCAAAAGCAACCAGGAAGTTCTGGA...GAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CAA 90 bp CAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTGTCTTCAGGCTGATGTaGCCAGCACTGAGTCATTAT +
Preference number: 5 (lower is better)
Translates to: QNVTFGLWFVKEPLPLSPVFRLM*PALSHY
Trigger: ATAATGACTCAGTGCTGGCAACATCAGCCTGAAGAC...AGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CAA 90 bp CGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTCCACGCTAATTCTGACTACATaGAAGCAGAGCACACACAAT +
Preference number: 5 (lower is better)
Translates to: RDIWSLVCEGAIASLSSTLILTT*KQSTHN
Trigger: ATTGTGTGTGCTCTGCTTCAATGTAGTCAGAATTAG...CGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CAA 90 bp CTGGGAGGAACAGGATACAAAGTTACATTTTCAGCAGCTACAATGTATAAAGGCGGAGCTGTGAGGATGTaGCTCAGGCACTTGGGTGAG +
Preference number: 5 (lower is better)
Translates to: LGGTGYKVTFSAATMYKGGAVRM*LRHLGE
Trigger: CTCACCCAAGTGCCTGAGCAACATCCTCACAGCTCC...GCCTTTATACATTGTAGCTGCTGAAAATGTAACTTTGTATCCTGTTCCTCCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453137.1
CDS-3UTR CAA 90 bp AAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCCCTTTTGCGTTCCTTTaGGCTCCTCCAAGCTCTTCT +
Preference number: 5 (lower is better)
Translates to: KTKRDIWSLVCEGAIASLPFAFL*APPSSS
Trigger: AGAAGAGCTTGGAGGAGCCAAAAGGAACGCAAAAGG...GAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS-3UTR CAA 90 bp AACATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATGGCTCTGAACAGTCCTaGGTACCCAGCGGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: NMHKNLMQPHLGLVFITHGSEQS*VPSGSF
Trigger: GAAGGAGCCGCTGGGTACCAAGGACTGTTCAGAGCC...ATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCATGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS-3UTR CAA 90 bp ACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCAACAGGTTTCTTGATTaGGGTGCTGTATTCTGCAGG +
Preference number: 5 (lower is better)
Translates to: TKRDIWSLVCEGAIASLSNRFLD*GAVFCR
Trigger: CCTGCAGAATACAGCACCCAAATCAAGAAACCTGTT...GGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CAA 90 bp AACATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATCCTGCGGCTCCGGAATaGCCGTTTAGCCCTAGAACC +
Preference number: 5 (lower is better)
Translates to: NMHKNLMQPHLGLVFITHPAAPE*PFSPRT
Trigger: GGTTCTAGGGCTAAACGGCAATTCCGGAGCCGCAGG...ATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCATGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CAA 90 bp AACATAGAAGCAGCTAATTCTGACTACATTGAAGCAGAGCACACACAATTTGAAGTCGAGGTGCGGAGCTaGCTCAGCTTGTACTCAGGG +
Preference number: 5 (lower is better)
Translates to: NIEAANSDYIEAEHTQFEVEVRS*LSLYSG
Trigger: CCCTGAGTACAAGCTGAGCAAGCTCCGCACCTCGAC...TTCAAATTGTGTGTGCTCTGCTTCAATGTAGTCAGAATTAGCTGCTTCTATGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CAA 90 bp ACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCACTTCCTGGTTGCTTTaGCTGGGGTATGGCATATAT +
Preference number: 5 (lower is better)
Translates to: TKRDIWSLVCEGAIASLSTSWLL*LGYGIY
Trigger: ATATATGCCATACCCCAGCAAAAGCAACCAGGAAGT...GGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CAA 90 bp AACATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATCTGGATCCGTGGACCTaGTGCAACTCCGAAGGAGGG +
Preference number: 5 (lower is better)
Translates to: NMHKNLMQPHLGLVFITHLDPWT*CNSEGG
Trigger: CCCTCCTTCGGAGTTGCACAAGGTCCACGGATCCAG...ATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCATGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CAA 90 bp AACATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATACCAGGAGCCGTACGTaGGGTTCCACAAGCTGGTGG +
Preference number: 5 (lower is better)
Translates to: NMHKNLMQPHLGLVFITHTRSRT*GSTSWW
Trigger: CCACCAGCTTGTGGAACCCAACGTACGGCTCCTGGT...ATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCATGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CAA 90 bp TGGGAGGAACAGGATACAAAGTTACATTTTCAGCAGCTACAATGTATAAAGGCACCACAGGAGTTCCATTaGCAGGAGAGTGGCTGGAGC +
Preference number: 5 (lower is better)
Translates to: WEEQDTKLHFQQLQCIKAPQEFH*QESGWS
Trigger: GCTCCAGCCACTCTCCTGCAAATGGAACTCCTGTGG...TGCCTTTATACATTGTAGCTGCTGAAAATGTAACTTTGTATCCTGTTCCTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453137.1
CDS-3UTR CAA 90 bp AACATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATCAGTCGCCCTTCGCCTaGGCGAATCCACCAACTGAA +
Preference number: 5 (lower is better)
Translates to: NMHKNLMQPHLGLVFITHQSPFA*ANPPTE
Trigger: TTCAGTTGGTGGATTCGCCAAGGCGAAGGGCGACTG...ATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCATGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS-3UTR CAA 90 bp AAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCAAGGAGAAGGCATGTTaGTTGGTGATTCCAAGGAGC +
Preference number: 5 (lower is better)
Translates to: KTKRDIWSLVCEGAIASLKEKAC*LVIPRS
Trigger: GCTCCTTGGAATCACCAACAAACATGCCTTCTCCTT...GAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CAA 90 bp CAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTACAATGTTCTGGTGGTaGAATTTGCTGATGATCAGG +
Preference number: 5 (lower is better)
Translates to: QNVTFGLWFVKEPLPLSPTMFWW*NLLMIR
Trigger: CCTGATCATCAGCAAATTCAACCACCAGAACATTGT...AGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CAA 90 bp AAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCGTCTTCAGGCTGATGTaGCCAGCACTGAGTCATTAT +
Preference number: 5 (lower is better)
Translates to: KTKRDIWSLVCEGAIASLVFRLM*PALSHY
Trigger: ATAATGACTCAGTGCTGGCAACATCAGCCTGAAGAC...GAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS GCA 90 bp TTCTGTTCACACGGATTTCTTCTTCTATCACATTGTTCTCTCCAATaGAGACTTTCTGGATTAACTGGTTTGTACTGGGGCAGGCGTCCT +
Preference number: 5 (lower is better)
Translates to: FCSHGFLLLSHCSLQ*RLSGLTGLYWGRRP
Trigger: AGGACGCCTGCCCCAGTACAAACCAGTTAATCCAGAAAGTCTGCATTGGAGAGAACAATGTGATAGAAGAAGAAATCCGTGTGAACAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS CCA 90 bp CTGGTTCCTCCAAGAAGCAGACTGGAGATGGGATTAGACCCAATATaGTCTGCAGATTTTATTAGAAGAAATGCCCATGAGAGGAAATGG +
Preference number: 5 (lower is better)
Translates to: LVPPRSRLEMGLDPI*SADFIRRNAHERKW
Trigger: CCATTTCCTCTCATGGGCATTTCTTCTAATAAAATCTGCAGACCATATTGGGTCTAATCCCATCTCCAGTCTGCTTCTTGGAGGAACCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642122.1
CDS-3UTR CAA 90 bp AACATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATCTCAGGATGGTGTGCTaGGAGTCAGCTGAGGTGTTG +
Preference number: 5 (lower is better)
Translates to: NMHKNLMQPHLGLVFITHLRMVC*ESAEVL
Trigger: CAACACCTCAGCTGACTCCAAGCACACCATCCTGAG...ATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCATGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CAA 90 bp ATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATTTTTCAGGAGGATCTCTCTaGCAGCCTCGTTGTGGGGCA +
Preference number: 5 (lower is better)
Translates to: MHKNLMQPHLGLVFITHFSGGSL*QPRCGA
Trigger: TGCCCCACAACGAGGCTGCAAGAGAGATCCTCCTGA...AAAATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CAA 90 bp AACATAGAAGCAGCTAATTCTGACTACATTGAAGCAGAGCACACACAATTTGAAGCCACTCGAAATGGGTaGTCTGGACGCCCGATTCTT +
Preference number: 5 (lower is better)
Translates to: NIEAANSDYIEAEHTQFEATRNG*SGRPIL
Trigger: AAGAATCGGGCGTCCAGACAACCCATTTCGAGTGGC...TTCAAATTGTGTGTGCTCTGCTTCAATGTAGTCAGAATTAGCTGCTTCTATGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CAA 90 bp AAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCAACAGGTTTCTTGATTaGGGTGCTGTATTCTGCAGG +
Preference number: 5 (lower is better)
Translates to: KTKRDIWSLVCEGAIASLNRFLD*GAVFCR
Trigger: CCTGCAGAATACAGCACCCAAATCAAGAAACCTGTT...GAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CAA 90 bp AAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCGTTTCAGCTCCTTGTTaGGGTTTCTCTCAAACAGGT +
Preference number: 5 (lower is better)
Translates to: KTKRDIWSLVCEGAIASLVSAPC*GFSQTG
Trigger: ACCTGTTTGAGAGAAACCCAAACAAGGAGCTGAAAC...GAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CAA 90 bp CAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCCTTCTTCTTCTATCACATaGTTCTCTCCAATGCAGACT +
Preference number: 5 (lower is better)
Translates to: QNVTFGLWFVKEPLPLSPSSSIT*FSPMQT
Trigger: AGTCTGCATTGGAGAGAACAATGTGATAGAAGAAGA...AGGAGAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CAA 90 bp ATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATTTTCTCCCGTTTTGCCTGTaGAGAGACCAGGAGAGGAGG +
Preference number: 5 (lower is better)
Translates to: MHKNLMQPHLGLVFITHFLPFCL*RDQERR
Trigger: CCTCCTCTCCTGGTCTCTCAACAGGCAAAACGGGAG...AAAATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CAA 90 bp ATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATTTTGCTCCTCCTCCCGTTTaGCCTGTTGAGAGACCAGGA +
Preference number: 5 (lower is better)
Translates to: MHKNLMQPHLGLVFITHFAPPPV*PVERPG
Trigger: TCCTGGTCTCTCAACAGGCAAAACGGGAGGAGGAGC...AAAATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CAA 90 bp ATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATTTTCACAAGCTGGTGGGCTaGTTTCTGGATCCGTGGACC +
Preference number: 5 (lower is better)
Translates to: MHKNLMQPHLGLVFITHFHKLVG*FLDPWT
Trigger: GGTCCACGGATCCAGAAACAAGCCCACCAGCTTGTG...AAAATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CAA 90 bp TGGGAGGAACAGGATACAAAGTTACATTTTCAGCAGCTACAATGTATAAAGGCAATGTTGCTCAGGCACTaGGGTGAGGAAGTGTCTCAG +
Preference number: 5 (lower is better)
Translates to: WEEQDTKLHFQQLQCIKAMLLRH*GEEVSQ
Trigger: CTGAGACACTTCCTCACCCAAGTGCCTGAGCAACAT...TGCCTTTATACATTGTAGCTGCTGAAAATGTAACTTTGTATCCTGTTCCTCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453137.1
CDS-3UTR CAA 90 bp TGGGAGGAACAGGATACAAAGTTACATTTTCAGCAGCTACAATGTATAAAGGCACCTAAACCCAGAATCTaGCTGGTGAGCAGGTGGGAA +
Preference number: 5 (lower is better)
Translates to: WEEQDTKLHFQQLQCIKAPKPRI*LVSRWE
Trigger: TTCCCACCTGCTCACCAGCAAGATTCTGGGTTTAGG...TGCCTTTATACATTGTAGCTGCTGAAAATGTAACTTTGTATCCTGTTCCTCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453137.1
CDS-3UTR CAA 90 bp AACATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATTCCAGAACTTCCTGGTaGCTTTTGCTGGGGTATGGC +
Preference number: 5 (lower is better)
Translates to: NMHKNLMQPHLGLVFITHSRTSW*LLLGYG
Trigger: GCCATACCCCAGCAAAAGCAACCAGGAAGTTCTGGA...ATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCATGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CAA 90 bp ATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATTTTTTTGTGAAGGAGCCATaGCCTCTCTCTCCTCCACGG +
Preference number: 5 (lower is better)
Translates to: MHKNLMQPHLGLVFITHFFVKEP*PLSPPR
Trigger: CCGTGGAGGAGAGAGAGGCAATGGCTCCTTCACAAA...AAAATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCAT
43% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CAA 90 bp TGGCACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCCTAATTCTGACTACATaGAAGCAGAGCACACACAAT +
Preference number: 5 (lower is better)
Translates to: WHKTKRDIWSLVCEGAIALILTT*KQSTHN
Trigger: ATTGTGTGTGCTCTGCTTCAATGTAGTCAGAATTAG...GGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGTGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CAA 90 bp AACATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATTCACATGGAGAGCTCTaGATCGGTGCAGGAAACGTA +
Preference number: 5 (lower is better)
Translates to: NMHKNLMQPHLGLVFITHSHGEL*IGAGNV
Trigger: TACGTTTCCTGCACCGATCAAGAGCTCTCCATGTGA...ATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCATGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CAA 90 bp AAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTCTCAAACAGGTTTCTaGATTTGGGTGCTGTATTCT +
Preference number: 5 (lower is better)
Translates to: KTKRDIWSLVCEGAIASLSQTGF*IWVLYS
Trigger: AGAATACAGCACCCAAATCAAGAAACCTGTTTGAGA...GAGAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CAA 90 bp ACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCTCTTCTTCTATCACATaGTTCTCTCCAATGCAGACT +
Preference number: 5 (lower is better)
Translates to: TKQNVTFGLWFVKEPLPLSSSIT*FSPMQT
Trigger: AGTCTGCATTGGAGAGAACAATGTGATAGAAGAAGA...GAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CAA 90 bp AACATAGAAGCAGCTAATTCTGACTACATTGAAGCAGAGCACACACAATTTGAATTGTTTGAGGCTGCATaGCCGCCTATATATCCTCCG +
Preference number: 5 (lower is better)
Translates to: NIEAANSDYIEAEHTQFELFEAA*PPIYPP
Trigger: CGGAGGATATATAGGCGGCAATGCAGCCTCAAACAA...TTCAAATTGTGTGTGCTCTGCTTCAATGTAGTCAGAATTAGCTGCTTCTATGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CAA 90 bp ACAAAACAAAACGTGACATTTGGTCTCTGGTTTGTGAAGGAGCCATTGCCTCTCCTAATTCTGACTACATaGAAGCAGAGCACACACAAT +
Preference number: 5 (lower is better)
Translates to: TKQNVTFGLWFVKEPLPLLILTT*KQSTHN
Trigger: ATTGTGTGTGCTCTGCTTCAATGTAGTCAGAATTAG...GAGAGGCAATGGCTCCTTCACAAACCAGAGACCAAATGTCACGTTTTGTTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CAA 90 bp ATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATTTTGTATTCTGCAGGATCTaGTCCTCTCCGCTAATGGTG +
Preference number: 5 (lower is better)
Translates to: MHKNLMQPHLGLVFITHFVFCRI*SSPLMV
Trigger: CACCATTAGCGGAGAGGACAAGATCCTGCAGAATAC...AAAATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS-3UTR CAA 90 bp ATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATTTTTTCTGGTGGTTGAATTaGCTGATGATCAGGGCTTCC +
Preference number: 5 (lower is better)
Translates to: MHKNLMQPHLGLVFITHFFWWLN*LMIRAS
Trigger: GGAAGCCCTGATCATCAGCAAATTCAACCACCAGAA...AAAATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCAT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CAA 90 bp AACATGCATAAAAACCTTATGCAACCACATCTGGGCCTTGTATTTATCACTCATACTTCCTGGTTGCTTTaGCTGGGGTATGGCATATAT +
Preference number: 5 (lower is better)
Translates to: NMHKNLMQPHLGLVFITHTSWLL*LGYGIY
Trigger: ATATATGCCATACCCCAGCAAAAGCAACCAGGAAGT...ATGAGTGATAAATACAAGGCCCAGATGTGGTTGCATAAGGTTTTTATGCATGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS-3UTR CAA 90 bp AACATAGAAGCAGCTAATTCTGACTACATTGAAGCAGAGCACACACAATTTGAAACAATGTTCTGGTGGTaGAATTTGCTGATGATCAGG +
Preference number: 5 (lower is better)
Translates to: NIEAANSDYIEAEHTQFETMFWW*NLLMIR
Trigger: CCTGATCATCAGCAAATTCAACCACCAGAACATTGT...TTCAAATTGTGTGTGCTCTGCTTCAATGTAGTCAGAATTAGCTGCTTCTATGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
ENST00000642122.1
CDS GCA 72 bp GGTGGCCGACCAGAGGGCGGCCGGAAAGCACCTCGGTaGCCCGCGACCCTCCGAACAGAGGCGGCGGGAGGT +
Preference number: 6 (lower is better)
Translates to: GGRPEGGRKAPR*PATLRTEAAGG
Trigger: ACCTCCCGCCGCCTCTGTTCGGAGGGTCGCGGGGCACCGAGGTGCTTTCCGGCCGCCCTCTGGTCGGCCACC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS GCA 72 bp GGCTGGGACCTTGAGCCTCCCGCTCTCCGCGCCGAGTaGCGCGCCCCCGTCTGTAGCTCGCTGCGCTCGGTA +
Preference number: 6 (lower is better)
Translates to: GWDLEPPALRAE*RAPVCSSLRSV
Trigger: TACCGAGCGCAGCGAGCTACAGACGGGGGCGCGGCACTCGGCGCGGAGAGCGGGAGGCTCAAGGTCCCAGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS GCA 72 bp CGCGCGCTGGCCGGTCCCCATCCCGGAGCCCACAGCTaGCGTGGAAAGCAGCAGCGGCAGGAGCCACAGGAG +
Preference number: 6 (lower is better)
Translates to: RALAGPHPGAHS*RGKQQRQEPQE
Trigger: CTCCTGTGGCTCCTGCCGCTGCTGCTTTCCACGGCAGCTGTGGGCTCCGGGATGGGGACCGGCCAGCGCGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS CCA 72 bp GCCGGAGCTTGCGCACGGAGCCGCCCTTCAGCACCCTaGACAGCGTCCGGGCCTCTGCCGGGGCTGGTGAAC +
Preference number: 6 (lower is better)
Translates to: AGACARSRPSAP*TASGPLPGLVN
Trigger: GTTCACCAGCCCCGGCAGAGGCCCGGACGCTGTCCAGGGTGCTGAAGGGCGGCTCCGTGCGCAAGCTCCGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS CAA 90 bp GCCTCCTCGCCCAGCTCCAGCACCAACTGCTTGGCACGCCGGAGCTaGCGCACGGAGCCGCCCTTCAGCACCCTGGACAGCGTCCGGGCC +
Preference number: 6 (lower is better)
Translates to: ASSPSSSTNCLARRS*RTEPPFSTLDSVRA
Trigger: GGCCCGGACGCTGTCCAGGGTGCTGAAGGGCGGCTCCGTGCGCAAGCTCCGGCGTGCCAAGCAGTTGGTGCTGGAGCTGGGCGAGGAGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS GCA 72 bp GCGACCCTCCGAACAGAGGCGGCGGGAGGTACCAGCTaGTACCACCGCTGCCGCCCCCAGAGCCGCTGGATC +
Preference number: 6 (lower is better)
Translates to: ATLRTEAAGGTS*YHRCRPQSRWI
Trigger: GATCCAGCGGCTCTGGGGGCGGCAGCGGTGGTAGCAGCTGGTACCTCCCGCCGCCTCTGTTCGGAGGGTCGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS CCA 72 bp CGCCCCCTCCTCACCCATCATCAGCGCCCGCGGCTTTaGGTGGCCGACCAGAGGGCGGCCGGAAAGCACCTC +
Preference number: 6 (lower is better)
Translates to: RPLLTHHQRPRL*VADQRAAGKHL
Trigger: GAGGTGCTTTCCGGCCGCCCTCTGGTCGGCCACCCAAAGCCGCGGGCGCTGATGATGGGTGAGGAGGGGGCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS CAA 72 bp CCGCCCCCTCCTCACCCATCATCAGCGCCCGCGGCTTaGGGTGGCCGACCAGAGGGCGGCCGGAAAGCACCT +
Preference number: 6 (lower is better)
Translates to: PPPPHPSSAPAA*GGRPEGGRKAP
Trigger: AGGTGCTTTCCGGCCGCCCTCTGGTCGGCCACCCAAAGCCGCGGGCGCTGATGATGGGTGAGGAGGGGGCGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS CAA 90 bp CGGCGGCAGCAGCTGAGGGCGTTCAGGGCAGGGGCGCCCGAAATCTaGCCGCCCCCTCCTCACCCATCATCAGCGCCCGCGGCTTTGGGT +
Preference number: 6 (lower is better)
Translates to: RRQQLRAFRAGAPEI*PPPPHPSSAPAALG
Trigger: ACCCAAAGCCGCGGGCGCTGATGATGGGTGAGGAGGGGGCGGCAAGATTTCGGGCGCCCCTGCCCTGAACGCCCTCAGCTGCTGCCGCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS TCA 72 bp GACACTCAAGCACACTGGGCTCACTGGCTGGGACCTTaGGCCTCCCGCTCTCCGCGCCGAGTGCCGCGCCCC +
Preference number: 6 (lower is better)
Translates to: DTQAHWAHWLGP*ASRSPRRVPRP
Trigger: GGGGCGCGGCACTCGGCGCGGAGAGCGGGAGGCTCAAGGTCCCAGCCAGTGAGCCCAGTGTGCTTGAGTGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS TCA 72 bp CAACTGCCAGACTCTTCCTCTGCAGGCGCGAGTAGCTaGGTGGCTCCCGGGGCTGCAGCGGCGGCCCCGCAG +
Preference number: 6 (lower is better)
Translates to: QLPDSSSAGASS*VAPGAAAAAPQ
Trigger: CTGCGGGGCCGCCGCTGCAGCCCCGGGAGCCACTCAGCTACTCGCGCCTGCAGAGGAAGAGTCTGGCAGTTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS CCA 72 bp CCCTCCTCACCCATCATCAGCGCCCGCGGCTTTGGGTaGCCGACCAGAGGGCGGCCGGAAAGCACCTCGGTG +
Preference number: 6 (lower is better)
Translates to: PSSPIISARGFG*PTRGRPESTSV
Trigger: CACCGAGGTGCTTTCCGGCCGCCCTCTGGTCGGCCACCCAAAGCCGCGGGCGCTGATGATGGGTGAGGAGGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS CAA 90 bp GAAATCTTGCCGCCCCCTCCTCACCCATCATCAGCGCCCGCGGCTTaGGGTGGCCGACCAGAGGGCGGCCGGAAAGCACCTCGGTGCCCC +
Preference number: 6 (lower is better)
Translates to: EILPPPPHPSSAPAA*GGRPEGGRKAPRCP
Trigger: GGGGCACCGAGGTGCTTTCCGGCCGCCCTCTGGTCGGCCACCCAAAGCCGCGGGCGCTGATGATGGGTGAGGAGGGGGCGGCAAGATTTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS GCA 72 bp CTGGGCGTGAATCCCAGCCCCCGCGCTGCGCAAGTTTaGAGCGTCCTTGCTCTCACCGGCGCCTCGGCTCCT +
Preference number: 6 (lower is better)
Translates to: LGVNPSPRAAQV*SVLALTGASAP
Trigger: AGGAGCCGAGGCGCCGGTGAGAGCAAGGACGCTGCAAACTTGCGCAGCGCGGGGGCTGGGATTCACGCCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS GCA 72 bp GGTCTGGGCGGGAACCGAGGGCGGAGGCTGCCGTCTTaGGCACCCTCAAGCTATCTCTCCGCTGCGGGAAGG +
Preference number: 6 (lower is better)
Translates to: GLGGNRGRRLPS*APSSYLSAAGR
Trigger: CCTTCCCGCAGCGGAGAGATAGCTTGAGGGTGCGCAAGACGGCAGCCTCCGCCCTCGGTTCCCGCCCAGACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS GCA 72 bp GATGGCTCCCATCCCGCCGGAGGAGGCCGTTTACACTaGTCTCCGGGCCCAGCCTCACCCTTCGCTCTCCCC +
Preference number: 6 (lower is better)
Translates to: DGSHPAGGGRLH*SPGPASPFALP
Trigger: GGGGAGAGCGAAGGGTGAGGCTGGGCCCGGAGAGCAGTGTAAACGGCCTCCTCCGGCGGGATGGGAGCCATC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS GCA 72 bp CCAGCTCCAGCACCAACTGCTTGGCACGCCGGAGCTTaGGCACGGAGCCGCCCTTCAGCACCCTGGACAGCG +
Preference number: 6 (lower is better)
Translates to: PAPAPTAWHAGA*ARSRPSAPWTA
Trigger: CGCTGTCCAGGGTGCTGAAGGGCGGCTCCGTGCGCAAGCTCCGGCGTGCCAAGCAGTTGGTGCTGGAGCTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS GCA 72 bp TCCAAGATCGCCTCCTCGCCCAGCTCCAGCACCAACTaGTTGGCACGCCGGAGCTTGCGCACGGAGCCGCCC +
Preference number: 6 (lower is better)
Translates to: SKIASSPSSSTN*LARRSLRTEPP
Trigger: GGGCGGCTCCGTGCGCAAGCTCCGGCGTGCCAAGCAGTTGGTGCTGGAGCTGGGCGAGGAGGCGATCTTGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS CCA 72 bp GAACGCTCTGCCCCAGGCCCATCCAGCAAGTCCATCTaGGAGGCCTCCTCGGAGGGGATGCGGCGCCAGGAC +
Preference number: 6 (lower is better)
Translates to: ERSAPGPSSKSI*EASSEGMRRQD
Trigger: GTCCTGGCGCCGCATCCCCTCCGAGGAGGCCTCCCAGATGGACTTGCTGGATGGGCCTGGGGCAGAGCGTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS CAA 72 bp TCTGGGCGTGAATCCCAGCCCCCGCGCTGCGCAAGTTaGCAGCGTCCTTGCTCTCACCGGCGCCTCGGCTCC +
Preference number: 6 (lower is better)
Translates to: SGRESQPPRCAS*QRPCSHRRLGS
Trigger: GGAGCCGAGGCGCCGGTGAGAGCAAGGACGCTGCAAACTTGCGCAGCGCGGGGGCTGGGATTCACGCCCAGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS CAA 72 bp CGGTCTGGGCGGGAACCGAGGGCGGAGGCTGCCGTCTaGCGCACCCTCAAGCTATCTCTCCGCTGCGGGAAG +
Preference number: 6 (lower is better)
Translates to: RSGREPRAEAAV*RTLKLSLRCGK
Trigger: CTTCCCGCAGCGGAGAGATAGCTTGAGGGTGCGCAAGACGGCAGCCTCCGCCCTCGGTTCCCGCCCAGACCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS CAA 72 bp AGACACTCAAGCACACTGGGCTCACTGGCTGGGACCTaGAGCCTCCCGCTCTCCGCGCCGAGTGCCGCGCCC +
Preference number: 6 (lower is better)
Translates to: RHSSTLGSLAGT*SLPLSAPSAAP
Trigger: GGGCGCGGCACTCGGCGCGGAGAGCGGGAGGCTCAAGGTCCCAGCCAGTGAGCCCAGTGTGCTTGAGTGTCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS CAA 72 bp CCCAGCTCCAGCACCAACTGCTTGGCACGCCGGAGCTaGCGCACGGAGCCGCCCTTCAGCACCCTGGACAGC +
Preference number: 6 (lower is better)
Translates to: PSSSTNCLARRS*RTEPPFSTLDS
Trigger: GCTGTCCAGGGTGCTGAAGGGCGGCTCCGTGCGCAAGCTCCGGCGTGCCAAGCAGTTGGTGCTGGAGCTGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS CAA 90 bp TCTTCTGCCCGGTCTGGGCGGGAACCGAGGGCGGAGGCTGCCGTCTaGCGCACCCTCAAGCTATCTCTCCGCTGCGGGAAGGCTTCGGAC +
Preference number: 6 (lower is better)
Translates to: SSARSGREPRAEAAV*RTLKLSLRCGKASD
Trigger: GTCCGAAGCCTTCCCGCAGCGGAGAGATAGCTTGAGGGTGCGCAAGACGGCAGCCTCCGCCCTCGGTTCCCGCCCAGACCGGGCAGAAGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS CAA 90 bp CGAGTCCAGAGACACTCAAGCACACTGGGCTCACTGGCTGGGACCTaGAGCCTCCCGCTCTCCGCGCCGAGTGCCGCGCCCCCGTCTGTA +
Preference number: 6 (lower is better)
Translates to: RVQRHSSTLGSLAGT*SLPLSAPSAAPPSV
Trigger: TACAGACGGGGGCGCGGCACTCGGCGCGGAGAGCGGGAGGCTCAAGGTCCCAGCCAGTGAGCCCAGTGTGCTTGAGTGTCTCTGGACTCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS CAA 90 bp CAACCCTCCAAGATCGCCTCCTCGCCCAGCTCCAGCACCAACTGCTaGGCACGCCGGAGCTTGCGCACGGAGCCGCCCTTCAGCACCCTG +
Preference number: 6 (lower is better)
Translates to: QPSKIASSPSSSTNC*ARRSLRTEPPFSTL
Trigger: CAGGGTGCTGAAGGGCGGCTCCGTGCGCAAGCTCCGGCGTGCCAAGCAGTTGGTGCTGGAGCTGGGCGAGGAGGCGATCTTGGAGGGTTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS GCA 72 bp TCCCAGCCCCCGCGCTGCGCAAGTTTGCAGCGTCCTTaGTCTCACCGGCGCCTCGGCTCCTCAGAGTTCGCA +
Preference number: 6 (lower is better)
Translates to: SQPPRCASLQRP*SHRRLGSSEFA
Trigger: TGCGAACTCTGAGGAGCCGAGGCGCCGGTGAGAGCAAGGACGCTGCAAACTTGCGCAGCGCGGGGGCTGGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS CAA 72 bp ATCCCAGCCCCCGCGCTGCGCAAGTTTGCAGCGTCCTaGCTCTCACCGGCGCCTCGGCTCCTCAGAGTTCGC +
Preference number: 6 (lower is better)
Translates to: IPAPALRKFAAS*LSPAPRLLRVR
Trigger: GCGAACTCTGAGGAGCCGAGGCGCCGGTGAGAGCAAGGACGCTGCAAACTTGCGCAGCGCGGGGGCTGGGAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS TCA 72 bp TCTCCGCTGCGGGAAGGCTTCGGACTGTCTGCCTGCTaGACTTCTGGGCGTGAATCCCAGCCCCCGCGCTGC +
Preference number: 6 (lower is better)
Translates to: SPLREGFGLSAC*TSGRESQPPRC
Trigger: GCAGCGCGGGGGCTGGGATTCACGCCCAGAAGTTCAGCAGGCAGACAGTCCGAAGCCTTCCCGCAGCGGAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS GCA 72 bp GGGAGGCGCGAATTGCCGCGGACAGCCTTCCCTCTCTaGCCACTTCCGACGCCTTCTTCTCGGGCATCAGGC +
Preference number: 6 (lower is better)
Translates to: GRRELPRTAFPL*PLPTPSSRASG
Trigger: GCCTGATGCCCGAGAAGAAGGCGTCGGAAGTGGGCAGAGAGGGAAGGCTGTCCGCGGCAATTCGCGCCTCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS GCA 72 bp CCTCCACGCTCAGGTTGGAGTTCTGGTAGGCGTTGTTaGACTGTGCCTGGGTGGGGCCATGGGGCCCGCTGG +
Preference number: 6 (lower is better)
Translates to: PPRSGWSSGRRC*TVPGWGHGARW
Trigger: CCAGCGGGCCCCATGGCCCCACCCAGGCACAGTGCAACAACGCCTACCAGAACTCCAACCTGAGCGTGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS CCA 72 bp GTTCCTTTTGGCTCCTCCAAGCTCTTCTGCCCGGTCTaGGCGGGAACCGAGGGCGGAGGCTGCCGTCTTGCG +
Preference number: 6 (lower is better)
Translates to: VPFGSSKLFCPV*AGTEGGGCRLA
Trigger: CGCAAGACGGCAGCCTCCGCCCTCGGTTCCCGCCCAGACCGGGCAGAAGAGCTTGGAGGAGCCAAAAGGAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS CAA 90 bp GCTCCCAGCTGCTGCACGCTGTCCTGGCCGCCTTTTGCGTTCCTTTaGGCTCCTCCAAGCTCTTCTGCCCGGTCTGGGCGGGAACCGAGG +
Preference number: 6 (lower is better)
Translates to: APSCCTLSWPPFAFL*APPSSSARSGREPR
Trigger: CCTCGGTTCCCGCCCAGACCGGGCAGAAGAGCTTGGAGGAGCCAAAAGGAACGCAAAAGGCGGCCAGGACAGCGTGCAGCAGCTGGGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS GCA 72 bp GCCTTTTGCGTTCCTTTTGGCTCCTCCAAGCTCTTCTaGCCGGTCTGGGCGGGAACCGAGGGCGGAGGCTGC +
Preference number: 6 (lower is better)
Translates to: AFCVPFGSSKLF*PVWAGTEGGGC
Trigger: GCAGCCTCCGCCCTCGGTTCCCGCCCAGACCGGGCAGAAGAGCTTGGAGGAGCCAAAAGGAACGCAAAAGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS GCA 72 bp TCCGCGCCGAGTGCCGCGCCCCCGTCTGTAGCTCGCTaGGCTCGGTACAGAGGAACTACTATGGTTGAAGGG +
Preference number: 6 (lower is better)
Translates to: SAPSAAPPSVAR*ARYRGTTMVEG
Trigger: CCCTTCAACCATAGTAGTTCCTCTGTACCGAGCGCAGCGAGCTACAGACGGGGGCGCGGCACTCGGCGCGGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS GCA 72 bp TGGGGCAGCAGCTGGGCAATGTACCTTCCAGAGGGCTaGAGGTGCCTGTGCACCGAGACGGCCAGTGTGCAG +
Preference number: 6 (lower is better)
Translates to: WGSSWAMYLPEG*RCLCTETASVQ
Trigger: CTGCACACTGGCCGTCTCGGTGCACAGGCACCTGCAGCCCTCTGGAAGGTACATTGCCCAGCTGCTGCCCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS GCA 72 bp TGTAGGTGTCGGTGGCTGGCACCTTCCAGATCTGGATaGCTTTCAGGGGGCCCTCGCTCCCCACCTCCACGC +
Preference number: 6 (lower is better)
Translates to: CRCRWLAPSRSG*LSGGPRSPPPR
Trigger: GCGTGGAGGTGGGGAGCGAGGGCCCCCTGAAAGGCATCCAGATCTGGAAGGTGCCAGCCACCGACACCTACA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS CCA 72 bp GCTGCACGCTGTCCTGGCCGCCTTTTGCGTTCCTTTTaGCTCCTCCAAGCTCTTCTGCCCGGTCTGGGCGGG +
Preference number: 6 (lower is better)
Translates to: AARCPGRLLRSF*LLQALLPGLGG
Trigger: CCCGCCCAGACCGGGCAGAAGAGCTTGGAGGAGCCAAAAGGAACGCAAAAGGCGGCCAGGACAGCGTGCAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS CCA 72 bp GCCTCCTCGGAGGGGATGCGGCGCCAGGACCAGCTCTaGTTCCTGAGGTCATGCAGTGGAGGGGAATACTCC +
Preference number: 6 (lower is better)
Translates to: ASSEGMRRQDQL*FLRSCSGGEYS
Trigger: GGAGTATTCCCCTCCACTGCATGACCTCAGGAACCAGAGCTGGTCCTGGCGCCGCATCCCCTCCGAGGAGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS CCA 72 bp AGCTCCTGGTGCTTCCGGCGGTACACTGCAGGTGGGTaGTCAGCTGCAACATGGCCTGGCAGCCTGGCCCTT +
Preference number: 6 (lower is better)
Translates to: SSWCFRRYTAGG*SAATWPGSLAL
Trigger: AAGGGCCAGGCTGCCAGGCCATGTTGCAGCTGACCACCCACCTGCAGTGTACCGCCGGAAGCACCAGGAGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642122.1
CDS TCA 72 bp AGGCTTCGGACTGTCTGCCTGCTGAACTTCTGGGCGTaGATCCCAGCCCCCGCGCTGCGCAAGTTTGCAGCG +
Preference number: 6 (lower is better)
Translates to: RLRTVCLLNFWA*IPAPALRKFAA
Trigger: CGCTGCAAACTTGCGCAGCGCGGGGGCTGGGATTCACGCCCAGAAGTTCAGCAGGCAGACAGTCCGAAGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS TCA 72 bp CGGAGGGGATGCGGCGCCAGGACCAGCTCTGGTTCCTaGGGTCATGCAGTGGAGGGGAATACTCCAGCTCAC +
Preference number: 6 (lower is better)
Translates to: RRGCGARTSSGS*GHAVEGNTPAH
Trigger: GTGAGCTGGAGTATTCCCCTCCACTGCATGACCTCAGGAACCAGAGCTGGTCCTGGCGCCGCATCCCCTCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS GCA 72 bp CATGGCTTGCAGCTCCTGGTGCTTCCGGCGGTACACTaGAGGTGGGTGGTCAGCTGCAACATGGCCTGGCAG +
Preference number: 6 (lower is better)
Translates to: HGLQLLVLPAVH*RWVVSCNMAWQ
Trigger: CTGCCAGGCCATGTTGCAGCTGACCACCCACCTGCAGTGTACCGCCGGAAGCACCAGGAGCTGCAAGCCATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642122.1
CDS CCA 72 bp CTGAGAACGGCGGCTCCCAGCTGCTGCACGCTGTCCTaGCCGCCTTTTGCGTTCCTTTTGGCTCCTCCAAGC +
Preference number: 6 (lower is better)
Translates to: LRTAAPSCCTLS*PPFAFLLAPPS
Trigger: GCTTGGAGGAGCCAAAAGGAACGCAAAAGGCGGCCAGGACAGCGTGCAGCAGCTGGGAGCCGCCGTTCTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS CCA 72 bp AGATGCCCAGCACAGACACGCCGTGGGACCGCATCATaGTGTTCTTCCCGCCTTTCCCGCCAGCAGCTCCGT +
Preference number: 6 (lower is better)
Translates to: RCPAQTRRGTAS*CSSRLSRQQLR
Trigger: ACGGAGCTGCTGGCGGGAAAGGCGGGAAGAACACCATGATGCGGTCCCACGGCGTGTCTGTGCTGGGCATCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS CCA 72 bp CGGCGGTACACTGCAGGTGGGTGGTCAGCTGCAACATaGCCTGGCAGCCTGGCCCTTGAAGCACTACACAGG +
Preference number: 6 (lower is better)
Translates to: RRYTAGGWSAAT*PGSLALEALHR
Trigger: CCTGTGTAGTGCTTCAAGGGCCAGGCTGCCAGGCCATGTTGCAGCTGACCACCCACCTGCAGTGTACCGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642122.1
CDS CAA 72 bp TGCTGCACGCTGTCCTGGCCGCCTTTTGCGTTCCTTTaGGCTCCTCCAAGCTCTTCTGCCCGGTCTGGGCGG +
Preference number: 6 (lower is better)
Translates to: CCTLSWPPFAFL*APPSSSARSGR
Trigger: CCGCCCAGACCGGGCAGAAGAGCTTGGAGGAGCCAAAAGGAACGCAAAAGGCGGCCAGGACAGCGTGCAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS GCA 72 bp GCCTGTGCACCGAGACGGCCAGTGTGCAGTGCTCACTaGTGCTCCTCATCCACGGACTCAGGATGGTGTGCT +
Preference number: 6 (lower is better)
Translates to: ACAPRRPVCSAH*CSSSTDSGWCA
Trigger: AGCACACCATCCTGAGTCCGTGGATGAGGAGCAGCAGTGAGCACTGCACACTGGCCGTCTCGGTGCACAGGC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS GCA 72 bp AGCAGCTGGGCAATGTACCTTCCAGAGGGCTGCAGGTaGCTGTGCACCGAGACGGCCAGTGTGCAGTGCTCA +
Preference number: 6 (lower is better)
Translates to: SSWAMYLPEGCR*LCTETASVQCS
Trigger: TGAGCACTGCACACTGGCCGTCTCGGTGCACAGGCACCTGCAGCCCTCTGGAAGGTACATTGCCCAGCTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS CCA 72 bp AGCTCCGTAGCCCGAGATGCTGTAGGTGTCGGTGGCTaGCACCTTCCAGATCTGGATGCCTTTCAGGGGGCC +
Preference number: 6 (lower is better)
Translates to: SSVARDAVGVGG*HLPDLDAFQGA
Trigger: GGCCCCCTGAAAGGCATCCAGATCTGGAAGGTGCCAGCCACCGACACCTACAGCATCTCGGGCTACGGAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS CAA 90 bp TGCTTCCCTGGAGTGGGCATCAGGAGGATCTCTCTTGCAGCCTCGTaGTGGGGCAGCAGCTGGGCAATGTACCTTCCAGAGGGCTGCAGG +
Preference number: 6 (lower is better)
Translates to: CFPGVGIRRISLAAS*WGSSWAMYLPEGCR
Trigger: CCTGCAGCCCTCTGGAAGGTACATTGCCCAGCTGCTGCCCCACAACGAGGCTGCAAGAGAGATCCTCCTGATGCCCACTCCAGGGAAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS CAA 90 bp CTTGCTCAGCTTGTACTCAGGGCTCTGCAGCTCCATCTGCATGGCTaGCAGCTCCTGGTGCTTCCGGCGGTACACTGCAGGTGGGTGGTC +
Preference number: 6 (lower is better)
Translates to: LAQLVLRALQLHLHG*QLLVLPAVHCRWVV
Trigger: GACCACCCACCTGCAGTGTACCGCCGGAAGCACCAGGAGCTGCAAGCCATGCAGATGGAGCTGCAGAGCCCTGAGTACAAGCTGAGCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642122.1
CDS TCA 72 bp CTCACCCTTCGCTCTCCCCGAGATGGGAAGAGGCTCTaGACAGTCCTTGGTACCCAGCGGCTCCTTCCACCT +
Preference number: 6 (lower is better)
Translates to: LTLRSPRDGKRL*TVLGTQRLLPP
Trigger: AGGTGGAAGGAGCCGCTGGGTACCAAGGACTGTTCAGAGCCTCTTCCCATCTCGGGGAGAGCGAAGGGTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS TCA 72 bp GGTCCCGGGCTGAGCCTAAACCCAGAATCTTGCTGGTaGGCAGGTGGGAAGAACCACAGCAGGCTCCACAGG +
Preference number: 6 (lower is better)
Translates to: GPGLSLNPESCW*AGGKNHSRLHR
Trigger: CCTGTGGAGCCTGCTGTGGTTCTTCCCACCTGCTCACCAGCAAGATTCTGGGTTTAGGCTCAGCCCGGGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453137.1
CDS GCA 72 bp GCTGCCGTCTTGCGCACCCTCAAGCTATCTCTCCGCTaGGGGAAGGCTTCGGACTGTCTGCCTGCTGAACTT +
Preference number: 6 (lower is better)
Translates to: AAVLRTLKLSLR*GKASDCLPAEL
Trigger: AAGTTCAGCAGGCAGACAGTCCGAAGCCTTCCCGCAGCGGAGAGATAGCTTGAGGGTGCGCAAGACGGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS GCA 72 bp ATGCGGCGCCAGGACCAGCTCTGGTTCCTGAGGTCATaGAGTGGAGGGGAATACTCCAGCTCACAGGGGAAG +
Preference number: 6 (lower is better)
Translates to: MRRQDQLWFLRS*SGGEYSSSQGK
Trigger: CTTCCCCTGTGAGCTGGAGTATTCCCCTCCACTGCATGACCTCAGGAACCAGAGCTGGTCCTGGCGCCGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS GCA 72 bp GAGAAAGGAGCCTCTGGGCATCTCCTTAGAACGCTCTaGCCCAGGCCCATCCAGCAAGTCCATCTGGGAGGC +
Preference number: 6 (lower is better)
Translates to: EKGASGHLLRTL*PRPIQQVHLGG
Trigger: GCCTCCCAGATGGACTTGCTGGATGGGCCTGGGGCAGAGCGTTCTAAGGAGATGCCCAGAGGCTCCTTTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS CAA 72 bp CTGATCTCCAGAGGACTGTGCGTGCGCGCAAGTCTCTaGCTTTCCCCCAACTGCACGGAGGCGAGCAGGAGT +
Preference number: 6 (lower is better)
Translates to: LISRGLCVRASL*LSPNCTEASRS
Trigger: ACTCCTGCTCGCCTCCGTGCAGTTGGGGGAAAGCAAGAGACTTGCGCGCACGCACAGTCCTCTGGAGATCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS TCA 72 bp GTGGTCAGCTGCAACATGGCCTGGCAGCCTGGCCCTTaGAGCACTACACAGGCCACTTCCTACAGGAAGCCT +
Preference number: 6 (lower is better)
Translates to: VVSCNMAWQPGP*STTQATSYRKP
Trigger: AGGCTTCCTGTAGGAAGTGGCCTGTGTAGTGCTTCAAGGGCCAGGCTGCCAGGCCATGTTGCAGCTGACCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642122.1
CDS GCA 72 bp GTAGACACGGAAGAGCGAGGGCACCACGAAGTCAACTaGCAGACTCTTCCTCTGCAGGCGCGAGTAGCTGAG +
Preference number: 6 (lower is better)
Translates to: VDTEERGHHEVN*QTLPLQARVAE
Trigger: CTCAGCTACTCGCGCCTGCAGAGGAAGAGTCTGGCAGTTGACTTCGTGGTGCCCTCGCTCTTCCGTGTCTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS GCA 72 bp GCCTGGGGGCAGGAATGTCCTCCGGTGGCACCCTCCTaGAAAGATTTTCCGGCCCAGAGCAAGGAAGTGTTA +
Preference number: 6 (lower is better)
Translates to: AWGQECPPVAPS*KDFPAQSKEVL
Trigger: TAACACTTCCTTGCTCTGGGCCGGAAAATCTTTGCAGGAGGGTGCCACCGGAGGACATTCCTGCCCCCAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS GCA 72 bp TGCAGCTCCTGGTGCTTCCGGCGGTACACCGCTATGTaGTCAGTTCCCTCCTCTATGCAATGGACCGACCGT +
Preference number: 6 (lower is better)
Translates to: CSSWCFRRYTAM*SVPSSMQWTDR
Trigger: ACGGTCGGTCCATTGCATAGAGGAGGGAACTGAGCACATAGCGGTGTACCGCCGGAAGCACCAGGAGCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431873.6
CDS GCA 72 bp TTGTACTCAGGGCTCTGCAGCTCCATCTGCATGGCTTaGAGCTCCTGGTGCTTCCGGCGGTACACTGCAGGT +
Preference number: 6 (lower is better)
Translates to: LYSGLCSSICMA*SSWCFRRYTAG
Trigger: ACCTGCAGTGTACCGCCGGAAGCACCAGGAGCTGCAAGCCATGCAGATGGAGCTGCAGAGCCCTGAGTACAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642122.1
CDS CCA 72 bp TCGGGCATCAGGCGGATCCTCAGTCGCCCTTCGCCTTaGCGAATCCACCAACTGAACAGCTCGCTGAGATTG +
Preference number: 6 (lower is better)
Translates to: SGIRRILSRPSP*RIHQLNSSLRL
Trigger: CAATCTCAGCGAGCTGTTCAGTTGGTGGATTCGCCAAGGCGAAGGGCGACTGAGGATCCGCCTGATGCCCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS CCA 72 bp CACATCTGGCTCTCATCTTCTCCCTGGGCACAGTCCTaGTGGAAGTCACAGGCCTGCCCAAGCTGGAGGACT +
Preference number: 6 (lower is better)
Translates to: HIWLSSSPWAQS*WKSQACPSWRT
Trigger: AGTCCTCCAGCTTGGGCAGGCCTGTGACTTCCACCAGGACTGTGCCCAGGGAGAAGATGAGAGCCAGATGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS CCA 72 bp TTCTCCAGGTTGAAGATGCCCAGCACAGACACGCCGTaGGACCGCATCATGGTGTTCTTCCCGCCTTTCCCG +
Preference number: 6 (lower is better)
Translates to: FSRLKMPSTDTP*DRIMVFFPPFP
Trigger: CGGGAAAGGCGGGAAGAACACCATGATGCGGTCCCACGGCGTGTCTGTGCTGGGCATCTTCAACCTGGAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS CAA 72 bp CTCGGGCATCAGGCGGATCCTCAGTCGCCCTTCGCCTaGGCGAATCCACCAACTGAACAGCTCGCTGAGATT +
Preference number: 6 (lower is better)
Translates to: LGHQADPQSPFA*ANPPTEQLAEI
Trigger: AATCTCAGCGAGCTGTTCAGTTGGTGGATTCGCCAAGGCGAAGGGCGACTGAGGATCCGCCTGATGCCCGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS CAA 90 bp CGCCTTCTTCTCGGGCATCAGGCGGATCCTCAGTCGCCCTTCGCCTaGGCGAATCCACCAACTGAACAGCTCGCTGAGATTGAACTGGAG +
Preference number: 6 (lower is better)
Translates to: RLLLGHQADPQSPFA*ANPPTEQLAEIELE
Trigger: CTCCAGTTCAATCTCAGCGAGCTGTTCAGTTGGTGGATTCGCCAAGGCGAAGGGCGACTGAGGATCCGCCTGATGCCCGAGAAGAAGGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS CAA 90 bp CTGTCCAACCATGCTTCCCTGGAGTGGGCATCAGGAGGATCTCTCTaGCAGCCTCGTTGTGGGGCAGCAGCTGGGCAATGTACCTTCCAG +
Preference number: 6 (lower is better)
Translates to: LSNHASLEWASGGSL*QPRCGAAAGQCTFQ
Trigger: CTGGAAGGTACATTGCCCAGCTGCTGCCCCACAACGAGGCTGCAAGAGAGATCCTCCTGATGCCCACTCCAGGGAAGCATGGTTGGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS CAA 90 bp CTTGCTCAGCTTGTACTCAGGGCTCTGCAGCTCCATCTGCATGGCTaGCAGCTCCTGGTGCTTCCGGCGGTACACCGCTATGTGCTCAGT +
Preference number: 6 (lower is better)
Translates to: LAQLVLRALQLHLHG*QLLVLPAVHRYVLS
Trigger: ACTGAGCACATAGCGGTGTACCGCCGGAAGCACCAGGAGCTGCAAGCCATGCAGATGGAGCTGCAGAGCCCTGAGTACAAGCTGAGCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431873.6
CDS CAA 90 bp CTTGCTCAGCTTGTACTCAGGGCTCTGCAGCTCCATCTGCATGGCTaGCAGCTCCTGGTGCTTCCGGCGGTACACAATCATGATGCCGGA +
Preference number: 6 (lower is better)
Translates to: LAQLVLRALQLHLHG*QLLVLPAVHNHDAG
Trigger: TCCGGCATCATGATTGTGTACCGCCGGAAGCACCAGGAGCTGCAAGCCATGCAGATGGAGCTGCAGAGCCCTGAGTACAAGCTGAGCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS CAA 90 bp CACAGGAGTTCCATTTGCAGGAGAGTGGCTGGAGCTGTGAGGATGTaGCTCAGGCACTTGGGTGAGGAAGTGTCTCAGGGGGCAGGAGAG +
Preference number: 6 (lower is better)
Translates to: HRSSICRRVAGAVRM*LRHLGEEVSQGAGE
Trigger: CTCTCCTGCCCCCTGAGACACTTCCTCACCCAAGTGCCTGAGCAACATCCTCACAGCTCCAGCCACTCTCCTGCAAATGGAACTCCTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000453137.1
CDS TCA 72 bp TTCCCCCAACTGCACGGAGGCGAGCAGGAGTCTAAATaGAACAGACCTGGAAGCTCAGGGGCGAGTCCAGAG +
Preference number: 6 (lower is better)
Translates to: FPQLHGGEQESK*NRPGSSGASPE
Trigger: CTCTGGACTCGCCCCTGAGCTTCCAGGTCTGTTTCATTTAGACTCCTGCTCGCCTCCGTGCAGTTGGGGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS TCA 72 bp GGCTGGAGCTGTGAGGATGTTGCTCAGGCACTTGGGTaGGGAAGTGTCTCAGGGGGCAGGAGAGTGTCTTTC +
Preference number: 6 (lower is better)
Translates to: GWSCEDVAQALG*GSVSGGRRVSF
Trigger: GAAAGACACTCTCCTGCCCCCTGAGACACTTCCTCACCCAAGTGCCTGAGCAACATCCTCACAGCTCCAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000453137.1
CDS GCA 72 bp TTGTACTCAGGGCTCTGCAGCTCCATCTGCATGGCTTaGAGCTCCTGGTGCTTCCGGCGGTACACTGAGGAT +
Preference number: 6 (lower is better)
Translates to: LYSGLCSSICMA*SSWCFRRYTED
Trigger: ATCCTCAGTGTACCGCCGGAAGCACCAGGAGCTGCAAGCCATGCAGATGGAGCTGCAGAGCCCTGAGTACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638605.1
CDS CCA 72 bp GCGCCAGGACCAGCTCTGGTTCCTGAGGTCATGCAGTaGAGGGGAATACTCCAGCTCACAGGGGAAGTCAAA +
Preference number: 6 (lower is better)
Translates to: APGPALVPEVMQ*RGILQLTGEVK
Trigger: TTTGACTTCCCCTGTGAGCTGGAGTATTCCCCTCCACTGCATGACCTCAGGAACCAGAGCTGGTCCTGGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS CCA 72 bp ACTCGAAATGGGTTGTCTGGACGCCCGATTCTTCCCTaGAGCACTGTCCAACCATGCTTCCCTGGAGTGGGC +
Preference number: 6 (lower is better)
Translates to: TRNGLSGRPILP*STVQPCFPGVG
Trigger: GCCCACTCCAGGGAAGCATGGTTGGACAGTGCTCCAGGGAAGAATCGGGCGTCCAGACAACCCATTTCGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS CAA 90 bp TCCTTCCACCTGATCTCCAGAGGACTGTGCGTGCGCGCAAGTCTCTaGCTTTCCCCCAACTGCACGGAGGCGAGCAGGAGTCTAAATGAA +
Preference number: 6 (lower is better)
Translates to: SFHLISRGLCVRASL*LSPNCTEASRSLNE
Trigger: TTCATTTAGACTCCTGCTCGCCTCCGTGCAGTTGGGGGAAAGCAAGAGACTTGCGCGCACGCACAGTCCTCTGGAGATCAGGTGGAAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389048.8
CDS CAA 90 bp CTGCGGTTTCCACTGGAGATGTATTCCAGGGCCACTCGAAATGGGTaGTCTGGACGCCCGATTCTTCCCTGGAGCACTGTCCAACCATGC +
Preference number: 6 (lower is better)
Translates to: LRFPLEMYSRATRNG*SGRPILPWSTVQPC
Trigger: GCATGGTTGGACAGTGCTCCAGGGAAGAATCGGGCGTCCAGACAACCCATTTCGAGTGGCCCTGGAATACATCTCCAGTGGAAACCGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS TCA 72 bp CCTCAGCCAGCACCGTCCCGTGGTCACAGAAGCAGATaGCCTTGTGGCTTTCAGGGTCCATGTGACATTCGT +
Preference number: 6 (lower is better)
Translates to: PQPAPSRGHRSR*PCGFQGPCDIR
Trigger: ACGAATGTCACATGGACCCTGAAAGCCACAAGGTCATCTGCTTCTGTGACCACGGGACGGTGCTGGCTGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389048.8
ENST00000431873.6
ENST00000618119.4
CDS GCA 72 bp TTGTACTCAGGGCTCTGCAGCTCCATCTGCATGGCTTaGAGCTCCTGGTGCTTCCGGCGGTACACAATCATG +
Preference number: 6 (lower is better)
Translates to: LYSGLCSSICMA*SSWCFRRYTIM
Trigger: CATGATTGTGTACCGCCGGAAGCACCAGGAGCTGCAAGCCATGCAGATGGAGCTGCAGAGCCCTGAGTACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS CCA 72 bp TTCCCTGGAGCACTGTCCAACCATGCTTCCCTGGAGTaGGCATCAGGAGGATCTCTCTTGCAGCCTCGTTGT +
Preference number: 6 (lower is better)
Translates to: FPGALSNHASLE*ASGGSLLQPRC
Trigger: ACAACGAGGCTGCAAGAGAGATCCTCCTGATGCCCACTCCAGGGAAGCATGGTTGGACAGTGCTCCAGGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS CCA 72 bp GGAGATGTATTCCAGGGCCACTCGAAATGGGTTGTCTaGACGCCCGATTCTTCCCTGGAGCACTGTCCAACC +
Preference number: 6 (lower is better)
Translates to: GDVFQGHSKWVV*TPDSSLEHCPT
Trigger: GGTTGGACAGTGCTCCAGGGAAGAATCGGGCGTCCAGACAACCCATTTCGAGTGGCCCTGGAATACATCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS CAA 72 bp CCACTGGAGATGTATTCCAGGGCCACTCGAAATGGGTaGTCTGGACGCCCGATTCTTCCCTGGAGCACTGTC +
Preference number: 6 (lower is better)
Translates to: PLEMYSRATRNG*SGRPILPWSTV
Trigger: GACAGTGCTCCAGGGAAGAATCGGGCGTCCAGACAACCCATTTCGAGTGGCCCTGGAATACATCTCCAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS TCA 72 bp GCACCAAGGACACGTTTCCCCTCAAGACTCCACGAATaGGCCAGGACATTCGGAGCTCACATGGAGAGCTCT +
Preference number: 6 (lower is better)
Translates to: APRTRFPSRLHE*ARTFGAHMESS
Trigger: AGAGCTCTCCATGTGAGCTCCGAATGTCCTGGCTCATTCGTGGAGTCTTGAGGGGAAACGTGTCCTTGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389048.8
ENST00000498037.1
ENST00000618119.4
CDS GCA 72 bp TGGAGGACTGTCCCATTCCAACAAGTGAAGGAGCTCTaGAGGGCCATCTTGGAGCCTGGGGATGTTCCTTCA +
Preference number: 6 (lower is better)
Translates to: WRTVPFQQVKEL*RAILEPGDVPS
Trigger: TGAAGGAACATCCCCAGGCTCCAAGATGGCCCTGCAGAGCTCCTTCACTTGTTGGAATGGGACAGTCCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS GCA 72 bp TCAAGCCTTCATAGGCGGCGACATGCCAGACCATCCTaGCTTGCTCCTTCCCGGTTTTGTTCTCCACTAGCA +
Preference number: 6 (lower is better)
Translates to: SSLHRRRHARPS*LAPSRFCSPLA
Trigger: TGCTAGTGGAGAACAAAACCGGGAAGGAGCAAGGCAGGATGGTCTGGCATGTCGCCGCCTATGAAGGCTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389048.8
ENST00000498037.1
ENST00000618119.4
CDS CCA 72 bp GTTTCCACTGGAGATGTATTCCAGGGCCACTCGAAATaGGTTGTCTGGACGCCCGATTCTTCCCTGGAGCAC +
Preference number: 6 (lower is better)
Translates to: VSTGDVFQGHSK*VVWTPDSSLEH
Trigger: GTGCTCCAGGGAAGAATCGGGCGTCCAGACAACCCATTTCGAGTGGCCCTGGAATACATCTCCAGTGGAAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS CCA 72 bp GCTGAGCCTAAACCCAGAATCTTGCTGGTGAGCAGGTaGGAAGAACCACAGCAGGCTCCACAGGAGTTCCAT +
Preference number: 6 (lower is better)
Translates to: AEPKPRILLVSR*EEPQQAPQEFH
Trigger: ATGGAACTCCTGTGGAGCCTGCTGTGGTTCTTCCCACCTGCTCACCAGCAAGATTCTGGGTTTAGGCTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453137.1
CDS CAA 72 bp CTGCTGCTCCTCATCCACGGACTCAGGATGGTGTGCTaGGAGTCAGCTGAGGTGTTGAGAAGGAGAAAGGAG +
Preference number: 6 (lower is better)
Translates to: LLLLIHGLRMVC*ESAEVLRRRKE
Trigger: CTCCTTTCTCCTTCTCAACACCTCAGCTGACTCCAAGCACACCATCCTGAGTCCGTGGATGAGGAGCAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS CAA 90 bp CAGGCTGATGGAGATATTGTCAAAAGCCACGATGGCTCTGGATCCTaGTCCCCACCATGCGACCATCTGCAGCCAGAACCTGTCAGACAC +
Preference number: 6 (lower is better)
Translates to: QADGDIVKSHDGSGS*SPPCDHLQPEPVRH
Trigger: GTGTCTGACAGGTTCTGGCTGCAGATGGTCGCATGGTGGGGACAAGGATCCAGAGCCATCGTGGCTTTTGACAATATCTCCATCAGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS GCA 72 bp TCACTGCTGCTCCTCATCCACGGACTCAGGATGGTGTaGTTGGAGTCAGCTGAGGTGTTGAGAAGGAGAAAG +
Preference number: 6 (lower is better)
Translates to: SLLLLIHGLRMV*LESAEVLRRRK
Trigger: CTTTCTCCTTCTCAACACCTCAGCTGACTCCAAGCACACCATCCTGAGTCCGTGGATGAGGAGCAGCAGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS CAA 72 bp GGAGATATTGTCAAAAGCCACGATGGCTCTGGATCCTaGTCCCCACCATGCGACCATCTGCAGCCAGAACCT +
Preference number: 6 (lower is better)
Translates to: GDIVKSHDGSGS*SPPCDHLQPEP
Trigger: AGGTTCTGGCTGCAGATGGTCGCATGGTGGGGACAAGGATCCAGAGCCATCGTGGCTTTTGACAATATCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS GCA 72 bp AGTTCTTCAGGGCAAAGAAGTCCACTGCAGACAAGCTaGGGTTTCCACTGGAGATGTATTCCAGGGCCACTC +
Preference number: 6 (lower is better)
Translates to: SSSGQRSPLQTS*GFHWRCIPGPL
Trigger: GAGTGGCCCTGGAATACATCTCCAGTGGAAACCGCAGCTTGTCTGCAGTGGACTTCTTTGCCCTGAAGAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS GCA 72 bp GGACATTCGGAGCTCACATGGAGAGCTCTTGATCGGTaGAGGAAACGTAGCACTGGTCACTGTAGCACTTTC +
Preference number: 6 (lower is better)
Translates to: GHSELTWRALDR*RKRSTGHCSTF
Trigger: GAAAGTGCTACAGTGACCAGTGCTACGTTTCCTGCACCGATCAAGAGCTCTCCATGTGAGCTCCGAATGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389048.8
ENST00000498037.1
ENST00000618119.4
CDS CAA 72 bp ATGAGCCAGGACATTCGGAGCTCACATGGAGAGCTCTaGATCGGTGCAGGAAACGTAGCACTGGTCACTGTA +
Preference number: 6 (lower is better)
Translates to: MSQDIRSSHGEL*IGAGNVALVTV
Trigger: TACAGTGACCAGTGCTACGTTTCCTGCACCGATCAAGAGCTCTCCATGTGAGCTCCGAATGTCCTGGCTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389048.8
ENST00000498037.1
ENST00000618119.4
CDS TCA 72 bp CATGGCTTGCAGCTCCTGGTGCTTCCGGCGGTACACTaGGGATCGAATGAATTGAAATGTGTAAATTGCCGA +
Preference number: 6 (lower is better)
Translates to: HGLQLLVLPAVH*GSNELKCVNCR
Trigger: TCGGCAATTTACACATTTCAATTCATTCGATCCTCAGTGTACCGCCGGAAGCACCAGGAGCTGCAAGCCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638605.1
CDS CCA 72 bp CAGGAGAGTGTCTTTCTCAGATACTGGTGCGTGGACTaGGTGCTAGAATTCATGGTCGATTTCTCCCAGGAA +
Preference number: 6 (lower is better)
Translates to: QESVFLRYWCVD*VLEFMVDFSQE
Trigger: TTCCTGGGAGAAATCGACCATGAATTCTAGCACCCAGTCCACGCACCAGTATCTGAGAAAGACACTCTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453137.1
CDS TCA 72 bp GCATGGTTTCTTATATTTTCTAAGCATGGCTCTGCCTaGAAATCTGGGAGAACAGGGGCTCCCATCCACACG +
Preference number: 6 (lower is better)
Translates to: AWFLIFSKHGSA*KSGRTGAPIHT
Trigger: CGTGTGGATGGGAGCCCCTGTTCTCCCAGATTTTCAGGCAGAGCCATGCTTAGAAAATATAAGAAACCATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498037.1
CDS CAA 90 bp GGTTTCAGCTCCTTGTTTGGGTTTCTCTCAAACAGGTTTCTTGATTaGGGTGCTGTATTCTGCAGGATCTTGTCCTCTCCGCTAATGGTG +
Preference number: 6 (lower is better)
Translates to: GFSSLFGFLSNRFLD*GAVFCRILSSPLMV
Trigger: CACCATTAGCGGAGAGGACAAGATCCTGCAGAATACAGCACCCAAATCAAGAAACCTGTTTGAGAGAAACCCAAACAAGGAGCTGAAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS CCA 72 bp CCTTGTTTGGGTTTCTCTCAAACAGGTTTCTTGATTTaGGTGCTGTATTCTGCAGGATCTTGTCCTCTCCGC +
Preference number: 6 (lower is better)
Translates to: PCLGFSQTGFLI*VLYSAGSCPLR
Trigger: GCGGAGAGGACAAGATCCTGCAGAATACAGCACCCAAATCAAGAAACCTGTTTGAGAGAAACCCAAACAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS CAA 72 bp TCCTTGTTTGGGTTTCTCTCAAACAGGTTTCTTGATTaGGGTGCTGTATTCTGCAGGATCTTGTCCTCTCCG +
Preference number: 6 (lower is better)
Translates to: SLFGFLSNRFLD*GAVFCRILSSP
Trigger: CGGAGAGGACAAGATCCTGCAGAATACAGCACCCAAATCAAGAAACCTGTTTGAGAGAAACCCAAACAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS CCA 72 bp CTGGAATTGATTTCAGCCTTGAGTTATGAGGCTTTGTaGAGAAGAAGCGTGATCAATGCTCAGCATAGCTGT +
Preference number: 6 (lower is better)
Translates to: LELISALSYEAL*RRSVINAQHSC
Trigger: ACAGCTATGCTGAGCATTGATCACGCTTCTTCTCCACAAAGCCTCATAACTCAAGGCTGAAATCAATTCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498037.1
CDS CAA 72 bp GTCTGTCTTGGTGAATTTTCCCCGGGTTTCAGCTCCTaGTTTGGGTTTCTCTCAAACAGGTTTCTTGATTTG +
Preference number: 6 (lower is better)
Translates to: VCLGEFSPGFSS*FGFLSNRFLDL
Trigger: CAAATCAAGAAACCTGTTTGAGAGAAACCCAAACAAGGAGCTGAAACCCGGGGAAAATTCACCAAGACAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS CAA 72 bp AACCTGGAATTGATTTCAGCCTTGAGTTATGAGGCTTaGTGGAGAAGAAGCGTGATCAATGCTCAGCATAGC +
Preference number: 6 (lower is better)
Translates to: NLELISALSYEA*WRRSVINAQHS
Trigger: GCTATGCTGAGCATTGATCACGCTTCTTCTCCACAAAGCCTCATAACTCAAGGCTGAAATCAATTCCAGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498037.1
CDS GCA 72 bp CACGGATTTCTTCTTCTATCACATTGTTCTCTCCAATaGAGACTTTCTGGATTAACTGGTTTGTACTGGGGC +
Preference number: 6 (lower is better)
Translates to: HGFLLLSHCSLQ*RLSGLTGLYWG
Trigger: GCCCCAGTACAAACCAGTTAATCCAGAAAGTCTGCATTGGAGAGAACAATGTGATAGAAGAAGAAATCCGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS CAA 90 bp CACTCATGCACGCTTCTGTTCACACGGATTTCTTCTTCTATCACATaGTTCTCTCCAATGCAGACTTTCTGGATTAACTGGTTTGTACTG +
Preference number: 6 (lower is better)
Translates to: HSCTLLFTRISSSIT*FSPMQTFWINWFVL
Trigger: CAGTACAAACCAGTTAATCCAGAAAGTCTGCATTGGAGAGAACAATGTGATAGAAGAAGAAATCCGTGTGAACAGAAGCGTGCATGAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389048.8
ENST00000618119.4
CDS CAA 90 bp AATACAGATTCCTGGTCCCAATATGTCATCTGTGAATCAGAATCTTaGTGTATGAGATCTGGGGCTCTTAGAATAGAACCTGGAATTGAT +
Preference number: 6 (lower is better)
Translates to: NTDSWSQYVICESES*CMRSGALRIEPGID
Trigger: ATCAATTCCAGGTTCTATTCTAAGAGCCCCAGATCTCATACACAAAGATTCTGATTCACAGATGACATATTGGGACCAGGAATCTGTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498037.1