RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ALG9 (Homo sapiens)

Ensembl gene IDs: ENSG00000086848

Ensembl transcript IDs: ENST00000398006.6, ENST00000524671.1, ENST00000525910.1, ENST00000530723.1, ENST00000530851.6, ENST00000531154.5, ENST00000532425.6, ENST00000612489.1, ENST00000613181.4, ENST00000614444.4, ENST00000616540.5, ENST00000618252.1, ENST00000619129.4

Found 794 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GAAGCACTACTTTCCTGCCACAGGTCAGGCTGCATCACACAGCACTaGTGTGCTGGTCTAACACACAGGCAGACTGGAGGCTCCAAAGAA +
Preference number: 1 (lower is better)
Translates to: EALLSCHRSGCITQH*CAGLTHRQTGGSKE
Trigger: TTCTTTGGAGCCTCCAGTCTGCCTGTGTGTTAGACCAGCACAGCAGTGCTGTGTGATGCAGCCTGACCTGTGGCAGGAAAGTAGTGCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
3UTR GCA 90 bp ACTACTTTCCTGCCACAGGTCAGGCTGCATCACACAGCACTGCTGTaGTGGTCTAACACACAGGCAGACTGGAGGCTCCAAAGAACTCAA +
Preference number: 1 (lower is better)
Translates to: TTFLPQVRLHHTALL*WSNTQADWRLQRTQ
Trigger: TTGAGTTCTTTGGAGCCTCCAGTCTGCCTGTGTGTTAGACCAGCACAGCAGTGCTGTGTGATGCAGCCTGACCTGTGGCAGGAAAGTAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
3UTR GCA 90 bp GTGGAGAAGCCCATATGGCCTAAGAGAGGCTTGCTAGTTCTCAGATaGCAGGCCAGAGTGTGGAGAACAGCTTATCACAGCCATCCAGTA +
Preference number: 1 (lower is better)
Translates to: VEKPIWPKRGLLVLR*QARVWRTAYHSHPV
Trigger: TACTGGATGGCTGTGATAAGCTGTTCTCCACACTCTGGCCTGGCATCTGAGAACTAGCAAGCCTCTCTTAGGCCATATGGGCTTCTCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
3UTR CCA 90 bp ACTTTCCTGCCACAGGTCAGGCTGCATCACACAGCACTGCTGTGCTaGTCTAACACACAGGCAGACTGGAGGCTCCAAAGAACTCAAATA +
Preference number: 1 (lower is better)
Translates to: TFLPQVRLHHTALLC*SNTQADWRLQRTQI
Trigger: TATTTGAGTTCTTTGGAGCCTCCAGTCTGCCTGTGTGTTAGACCAGCACAGCAGTGCTGTGTGATGCAGCCTGACCTGTGGCAGGAAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
3UTR GCA 90 bp GTGGCTGCAAAAGAACATGACTTCCAAACAGAAGCACTACTTTCCTaGCACAGGTCAGGCTGCATCACACAGCACTGCTGTGCTGGTCTA +
Preference number: 1 (lower is better)
Translates to: VAAKEHDFQTEALLS*HRSGCITQHCCAGL
Trigger: TAGACCAGCACAGCAGTGCTGTGTGATGCAGCCTGACCTGTGGCAGGAAAGTAGTGCTTCTGTTTGGAAGTCATGTTCTTTTGCAGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
3UTR CCA 90 bp TGGCCTAAGAGAGGCTTGCTAGTTCTCAGATGCCAGGCCAGAGTGTaGAGAACAGCTTATCACAGCCATCCAGTACCAGGATTTTCAATT +
Preference number: 1 (lower is better)
Translates to: WPKRGLLVLRCQARV*RTAYHSHPVPGFSI
Trigger: AATTGAAAATCCTGGTACTGGATGGCTGTGATAAGCTGTTCTCCACACTCTGGCCTGGCATCTGAGAACTAGCAAGCCTCTCTTAGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616540.5
3UTR CCA 90 bp CACACAGACATTCACAGGTCTGCCTTCTGGGACAGTGTGGATGGTTaGGTCTGTAGCAATTCGGTAAAATTCTGGATACAAATCAAGGGG +
Preference number: 1 (lower is better)
Translates to: HTDIHRSAFWDSVDG*VCSNSVKFWIQIKG
Trigger: CCCCTTGATTTGTATCCAGAATTTTACCGAATTGCTACAGACCCAACCATCCACACTGTCCCAGAAGGCAGACCTGTGAATGTCTGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619129.4
3UTR GCA 90 bp TTCATTTTCAGCATGAGGATTTCAATAAGAAGGTCTGCTAGGAGCTaGCAAACAGCTTTGGTGGAGAAGCCCATATGGCCTAAGAGAGGC +
Preference number: 1 (lower is better)
Translates to: FIFSMRISIRRSARS*QTALVEKPIWPKRG
Trigger: GCCTCTCTTAGGCCATATGGGCTTCTCCACCAAAGCTGTTTGGCAGCTCCTAGCAGACCTTCTTATTGAAATCCTCATGCTGAAAATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
3UTR CCA 90 bp CTGCATCACACAGCACTGCTGTGCTGGTCTAACACACAGGCAGACTaGAGGCTCCAAAGAACTCAAATACAGACACAATTCTTCCTTAAA +
Preference number: 1 (lower is better)
Translates to: LHHTALLCWSNTQAD*RLQRTQIQTQFFLK
Trigger: TTTAAGGAAGAATTGTGTCTGTATTTGAGTTCTTTGGAGCCTCCAGTCTGCCTGTGTGTTAGACCAGCACAGCAGTGCTGTGTGATGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
3UTR GCA 90 bp TCAGATAAGGCTGCTTTAGAGCTAGAAATCAGAGAACCATGCATTTaGCAAGTATACCTACTCCCTCACTCACCCCATGATCAAAGGCTA +
Preference number: 1 (lower is better)
Translates to: SDKAALELEIREPCI*QVYLLPHSPHDQRL
Trigger: TAGCCTTTGATCATGGGGTGAGTGAGGGAGTAGGTATACTTGGCAAATGCATGGTTCTCTGATTTCTAGCTCTAAAGCAGCCTTATCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
3UTR TCA 90 bp GTACTGTCTAGACCTATTACCTCTCCAGCGCTTCAACTCCGTCTCTaGTATTCCTGCAGAGGAGATCTCAAAGAGGAGCTTTTTAATATT +
Preference number: 1 (lower is better)
Translates to: VLSRPITSPALQLRL*YSCRGDLKEELFNI
Trigger: AATATTAAAAAGCTCCTCTTTGAGATCTCCTCTGCAGGAATATCAGAGACGGAGTTGAAGCGCTGGAGAGGTAATAGGTCTAGACAGTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
3UTR GCA 90 bp GGACAATACTCTTGCTTTAACACTTTACTGCTTCCTGATTTCATTTaGAGCATGAATCACCTGGTTATACAGACTGGCAGAAGGCAACAT +
Preference number: 1 (lower is better)
Translates to: GQYSCFNTLLLPDFI*SMNHLVIQTGRRQH
Trigger: ATGTTGCCTTCTGCCAGTCTGTATAACCAGGTGATTCATGCTGCAAATGAAATCAGGAAGCAGTAAAGTGTTAAAGCAAGAGTATTGTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
3UTR GCA 90 bp AGGTCCATGAGGAGTAAAGACATTATACAAAACAATGTTGAGTGGTaGAATCACCAACTTCCCATAATAGTAGCTGTCAATGACCACCAC +
Preference number: 1 (lower is better)
Translates to: RSMRSKDIIQNNVEW*NHQLPIIVAVNDHH
Trigger: GTGGTGGTCATTGACAGCTACTATTATGGGAAGTTGGTGATTGCACCACTCAACATTGTTTTGTATAATGTCTTTACTCCTCATGGACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613181.4
ENST00000618252.1
ENST00000619129.4
3UTR CCA 90 bp ATCAGGTCCATGAGGAGTAAAGACATTATACAAAACAATGTTGAGTaGTGCAATCACCAACTTCCCATAATAGTAGCTGTCAATGACCAC +
Preference number: 1 (lower is better)
Translates to: IRSMRSKDIIQNNVE*CNHQLPIIVAVNDH
Trigger: GTGGTCATTGACAGCTACTATTATGGGAAGTTGGTGATTGCACCACTCAACATTGTTTTGTATAATGTCTTTACTCCTCATGGACCTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613181.4
ENST00000618252.1
ENST00000619129.4
3UTR-3UTR GCA 90 bp AGAGGTTGCAGTGAGCTGAGGTCGTGCCATTGTGTTCCAACCTGGGCGACAGAGGCCCCATGCAGGATGTaGCTCACAACAGACAGAACT +
Preference number: 2 (lower is better)
Translates to: RGCSELRSCHCVPTWATEAPCRM*LTTDRT
Trigger: AGTTCTGTCTGTTGTGAGGCACATCCTGCATGGGGC...CTCTGTCGCCCAGGTTGGAACACAATGGCACGACCTCAGCTCACTGCAACCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
3UTR-3UTR CCA 90 bp AGAGGTTGCAGTGAGCTGAGGTCGTGCCATTGTGTTCCAACCTGGGCGACAGAGAGAATTGCTTCAACCTaGGAGGCAGAGGTTGCAGCG +
Preference number: 2 (lower is better)
Translates to: RGCSELRSCHCVPTWATERIAST*EAEVAA
Trigger: CGCTGCAACCTCTGCCTCCCAGGTTGAAGCAATTCT...CTCTGTCGCCCAGGTTGGAACACAATGGCACGACCTCAGCTCACTGCAACCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
3UTR-3UTR CCA 90 bp AGAGGTTGCAGTGAGCTGAGGTCGTGCCATTGTGTTCCAACCTGGGCGACAGAGAAAGGACATGTGGGTTaGCAACTAGGCTGTGTTCAT +
Preference number: 2 (lower is better)
Translates to: RGCSELRSCHCVPTWATEKGHVG*QLGCVH
Trigger: ATGAACACAGCCTAGTTGCCAACCCACATGTCCTTT...CTCTGTCGCCCAGGTTGGAACACAATGGCACGACCTCAGCTCACTGCAACCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
3UTR-3UTR TCA 90 bp AATGCCCGCAGCAGCTTTGAAGATCCCAGTCAAGGAGAAGTTAATGGCCAGGCAAAATGTTACAGGCGATaGCTTGCAGGGAGTCAGGTC +
Preference number: 2 (lower is better)
Translates to: NARSSFEDPSQGEVNGQAKCYRR*LAGSQV
Trigger: GACCTGACTCCCTGCAAGTCATCGCCTGTAACATTT...TGCCTGGCCATTAACTTCTCCTTGACTGGGATCTTCAAAGCTGCTGCGGGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619129.4
3UTR-3UTR TCA 90 bp AGCCCCAGCTGCTACTCCCAGCACAGCAATGGAAGTCTTGTCCATATACCATCCTTGCTTTCCGGGGTTTaGGGATGGTGTAGTTTACGT +
Preference number: 2 (lower is better)
Translates to: SPSCYSQHSNGSLVHIPSLLSGV*GWCSLR
Trigger: ACGTAAACTACACCATCCTCAAACCCCGGAAAGCAA...GGATGGTATATGGACAAGACTTCCATTGCTGTGCTGGGAGTAGCAGCTGGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619129.4
3UTR-3UTR GCA 90 bp AGAGCTGCACTGAATGGCCAGCCTAAGATAGCCCCAGCTGCTACTCCCAGCACAGCAACCCAAACTTCTTaGACACAGCCTTGTAAAAGT +
Preference number: 2 (lower is better)
Translates to: RAALNGQPKIAPAATPSTATQTS*TQPCKS
Trigger: ACTTTTACAAGGCTGTGTGCAAGAAGTTTGGGTTGC...TGTGCTGGGAGTAGCAGCTGGGGCTATCTTAGGCTGGCCATTCAGTGCAGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612489.1
ENST00000619129.4
3UTR-3UTR TCA 90 bp TCAGAGAACCATGCATTTGCCAAGTATACCTACTCCCTCACTCACCCCATGATCAGCTACTCGGGTGGCTaGGGCATGAGAATTGCTTCA +
Preference number: 2 (lower is better)
Translates to: SENHAFAKYTYSLTHPMISYSGG*GMRIAS
Trigger: TGAAGCAATTCTCATGCCTCAGCCACCCGAGTAGCT...GATCATGGGGTGAGTGAGGGAGTAGGTATACTTGGCAAATGCATGGTTCTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
3UTR-3UTR GCA 90 bp CGCTTCAACTCCGTCTCTGATATTCCTGCAGAGGAGATCTCAAAGAGGAGCTTTAGGTCTGCTAGGAGCTaGCAAACAGCTTTGGTGGAG +
Preference number: 2 (lower is better)
Translates to: RFNSVSDIPAEEISKRSFRSARS*QTALVE
Trigger: CTCCACCAAAGCTGTTTGGCAGCTCCTAGCAGACCT...AAAGCTCCTCTTTGAGATCTCCTCTGCAGGAATATCAGAGACGGAGTTGAAGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
3UTR-3UTR GCA 90 bp ATCTTTCAAGCAAGGGGGAGCCCAGTCTATCCTCACACACTCCCCAGTTATTGTTGCATCACACAGCACTaGTGTGCTGGTCTAACACAC +
Preference number: 2 (lower is better)
Translates to: IFQARGSPVYPHTLPSYCCITQH*CAGLTH
Trigger: GTGTGTTAGACCAGCACAGCAGTGCTGTGTGATGCA...ACAATAACTGGGGAGTGTGTGAGGATAGACTGGGCTCCCCCTTGCTTGAAAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
3UTR-3UTR GCA 90 bp ATTTTGGTAGCAGATGCCTACCGTGCAGACTGGTTCAGTAATGGTACTCAGCATTGCCACAGGTCAGGCTaGATCACACAGCACTGCTGT +
Preference number: 2 (lower is better)
Translates to: ILVADAYRADWFSNGTQHCHRSG*ITQHCC
Trigger: ACAGCAGTGCTGTGTGATGCAGCCTGACCTGTGGCA...ATGCTGAGTACCATTACTGAACCAGTCTGCACGGTAGGCATCTGCTACCAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
3UTR-3UTR GCA 90 bp CCCCAGCTGCTACTCCCAGCACAGCAATGGAAGTCTTGTCCATATACCATCCAGATCATTCGACTCACGTaGAACCCAAACTTCTTGCAC +
Preference number: 2 (lower is better)
Translates to: PQLLLPAQQWKSCPYTIQIIRLT*NPNFLH
Trigger: GTGCAAGAAGTTTGGGTTGCACGTGAGTCGAATGAT...CTGGATGGTATATGGACAAGACTTCCATTGCTGTGCTGGGAGTAGCAGCTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612489.1
ENST00000619129.4
3UTR CAA 90 bp TATACTGATCTGACAGGAAGGGGACATAGAATGCCCGCAGCAGCTTaGAAGATCTATGTGATGGTATTTGGAGGTGGGCCTTTGGAAGGG +
Preference number: 2 (lower is better)
Translates to: YTDLTGRGHRMPAAA*KIYVMVFGGGPLEG
Trigger: CCCTTCCAAAGGCCCACCTCCAAATACCATCACATAGATCTTCAAAGCTGCTGCGGGCATTCTATGTCCCCTTCCTGTCAGATCAGTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524671.1
3UTR-3UTR TCA 90 bp TGCTACTCCCAGCACAGCAATGGAAGTCTTGTCCATATACCATCCAGTCATGGCCTCCACTTTTCTTCCTaGTTTGCTTTGCTTTCCGGG +
Preference number: 2 (lower is better)
Translates to: CYSQHSNGSLVHIPSSHGLHFSS*FALLSG
Trigger: CCCGGAAAGCAAAGCAAATCAGGAAGAAAAGTGGAG...GCCATGACTGGATGGTATATGGACAAGACTTCCATTGCTGTGCTGGGAGTAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619129.4
3UTR-3UTR TCA 90 bp ATAGCCCCAGCTGCTACTCCCAGCACAGCAATGGAAGTCTTGTCCATATACCATAAAACATGCCAGTGCTaGGAACCAAGAAGGCTAGCA +
Preference number: 2 (lower is better)
Translates to: IAPAATPSTAMEVLSIYHKTCQC*EPRRLA
Trigger: TGCTAGCCTTCTTGGTTCTCAGCACTGGCATGTTTT...ATGGTATATGGACAAGACTTCCATTGCTGTGCTGGGAGTAGCAGCTGGGGCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612489.1
ENST00000619129.4
3UTR-3UTR GCA 90 bp AGGTCACTGGAATCAATAGTTAACAAGATGGTTGTCCTTTGGGGCCACAGGTGTTTACAGGCGATGACTTaGAGGGAGTCAGGTCACTGG +
Preference number: 2 (lower is better)
Translates to: RSLESIVNKMVVLWGHRCLQAMT*RESGHW
Trigger: CCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAA...ACACCTGTGGCCCCAAAGGACAACCATCTTGTTAACTATTGATTCCAGTGACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000398006.6
ENST00000524671.1
ENST00000525910.1
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
3UTR-3UTR GCA 90 bp TCAGAGAACCATGCATTTGCCAAGTATACCTACTCCCTCACTCACCCCATGATCTTGCTAGTTCTCAGATaGCAGGCCAGAGTGTGGAGA +
Preference number: 2 (lower is better)
Translates to: SENHAFAKYTYSLTHPMILLVLR*QARVWR
Trigger: TCTCCACACTCTGGCCTGGCATCTGAGAACTAGCAA...GATCATGGGGTGAGTGAGGGAGTAGGTATACTTGGCAAATGCATGGTTCTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
3UTR-3UTR CCA 90 bp ATTTTGGTAGCAGATGCCTACCGTGCAGACTGGTTCAGTAATGGTACTCAGCATTGCCAGGCCAGAGTGTaGAGAACAGCTTATCACAGC +
Preference number: 2 (lower is better)
Translates to: ILVADAYRADWFSNGTQHCQARV*RTAYHS
Trigger: GCTGTGATAAGCTGTTCTCCACACTCTGGCCTGGCA...ATGCTGAGTACCATTACTGAACCAGTCTGCACGGTAGGCATCTGCTACCAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
3UTR-3UTR CCA 90 bp CGCTTCAACTCCGTCTCTGATATTCCTGCAGAGGAGATCTCAAAGAGGAGCTTTGTGGAGAAGCCCATATaGCCTAAGAGAGGCTTGCTA +
Preference number: 2 (lower is better)
Translates to: RFNSVSDIPAEEISKRSFVEKPI*PKRGLL
Trigger: TAGCAAGCCTCTCTTAGGCCATATGGGCTTCTCCAC...AAAGCTCCTCTTTGAGATCTCCTCTGCAGGAATATCAGAGACGGAGTTGAAGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
3UTR CAA 90 bp ATGAGGATTTCAATAAGAAGGTCTGCTAGGAGCTGCCAAACAGCTTaGGTGGAGAAGCCCATATGGCCTAAGAGAGGCTTGCTAGTTCTC +
Preference number: 2 (lower is better)
Translates to: MRISIRRSARSCQTA*VEKPIWPKRGLLVL
Trigger: GAGAACTAGCAAGCCTCTCTTAGGCCATATGGGCTTCTCCACCAAAGCTGTTTGGCAGCTCCTAGCAGACCTTCTTATTGAAATCCTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
3UTR CAA 90 bp CCTAAGATAGCCCCAGCTGCTACTCCCAGCACAGCAATGGAAGTCTaGTCCATATACCATCCAGTCATGGCTATCAACGTAGTGTACATA +
Preference number: 2 (lower is better)
Translates to: PKIAPAATPSTAMEV*SIYHPVMAINVVYI
Trigger: TATGTACACTACGTTGATAGCCATGACTGGATGGTATATGGACAAGACTTCCATTGCTGTGCTGGGAGTAGCAGCTGGGGCTATCTTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612489.1
ENST00000613181.4
ENST00000619129.4
3UTR-3UTR TCA 90 bp CCACATGTTGTGACTGTGAGGATCAAACGAGATGCTGTGAAAGTGCCTTGTAAATGGTCACCTTTTTCCTaGGATAGCTCCAGGACAGGG +
Preference number: 2 (lower is better)
Translates to: PHVVTVRIKRDAVKVPCKWSPFS*DSSRTG
Trigger: CCCTGTCCTGGAGCTATCTCAGGAAAAAGGTGACCA...TTTACAAGGCACTTTCACAGCATCTCGTTTGATCCTCACAGTCACAACATGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
3UTR-3UTR TCA 90 bp ACTGCTACTCTGAGCAGGTGTGTTGAAACTGTTTTTCCCAGGCAAAGCTATCCTGGAGAACTGCTACTCTaGGCAGGTGTGTTGAAACTG +
Preference number: 2 (lower is better)
Translates to: TATLSRCVETVFPRQSYPGELLL*AGVLKL
Trigger: CAGTTTCAACACACCTGCTCAGAGTAGCAGTTCTCC...AGGATAGCTTTGCCTGGGAAAAACAGTTTCAACACACCTGCTCAGAGTAGCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
3UTR-3UTR TCA 90 bp ACAAGATGGTTGTCCTTTGGGGCCACAGGTGTGTTGCTAACCTCCACTTTTCTTACGTACACTGTATACTaGTCTGACAGGAAGGGGACA +
Preference number: 2 (lower is better)
Translates to: TRWLSFGATGVLLTSTFLTYTVY*SDRKGT
Trigger: TGTCCCCTTCCTGTCAGATCAGTATACAGTGTACGT...AAGAAAAGTGGAGGTTAGCAACACACCTGTGGCCCCAAAGGACAACCATCTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000524671.1
ENST00000525910.1
ENST00000619129.4
3UTR-3UTR TCA 90 bp GCTGCCAATTGTCAGGAAGAAGGAAGCTGCTGGGAAATCGATACCACTCTTTTCACGTACACTGTATACTaGTCTGACAGGAAGGGGACA +
Preference number: 2 (lower is better)
Translates to: AANCQEEGSCWEIDTTLFTYTVY*SDRKGT
Trigger: TGTCCCCTTCCTGTCAGATCAGTATACAGTGTACGT...GAAAAGAGTGGTATCGATTTCCCAGCAGCTTCCTTCTTCCTGACAATTGGCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619129.4
3UTR-3UTR TCA 90 bp GTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAATCAATAGTTAACAAGCTTCTTGCAGCCATGTaGGGATACAAGTCAGCTGTC +
Preference number: 2 (lower is better)
Translates to: VTGDDLQGVRSLESIVNKLLAAM*GYKSAV
Trigger: GACAGCTGACTTGTATCCTCACATGGCTGCAAGAAG...CTTGTTAACTATTGATTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524671.1
3UTR-3UTR TCA 90 bp AGTGCCACAGAGCGAGAAAATGACAAGAGCCCAAACAGGAAGACAGTTCCTAATGCCATCAGCGACCAATaGAAGAAACTCTTCCACCTG +
Preference number: 2 (lower is better)
Translates to: SATERENDKSPNRKTVPNAISDQ*KKLFHL
Trigger: CAGGTGGAAGAGTTTCTTTCATTGGTCGCTGATGGC...ATTAGGAACTGTCTTCCTGTTTGGGCTCTTGTCATTTTCTCGCTCTGTGGCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613181.4
ENST00000619129.4
3UTR-3UTR TCA 90 bp AAGAGCCCAAACAGGAAGACAGTTCCTAATGCCAGCCAATTCGATGTCACAGTAGCACCAGAAATAGTATaGGGGCCATCAGCGACCAAT +
Preference number: 2 (lower is better)
Translates to: KSPNRKTVPNASQFDVTVAPEIV*GPSATN
Trigger: ATTGGTCGCTGATGGCCCTCATACTATTTCTGGTGC...TACTGTGACATCGAATTGGCTGGCATTAGGAACTGTCTTCCTGTTTGGGCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613181.4
ENST00000619129.4
3UTR-3UTR GCA 90 bp GATGACTTGCAGGGAGTCAGGTCACTGGAATCAATAGTTAACAAGATGGTTGTCTTACAGGCGATGACTTaGAGGGAGTCAGGTCACTGG +
Preference number: 2 (lower is better)
Translates to: DDLQGVRSLESIVNKMVVLQAMT*RESGHW
Trigger: CCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAA...GACAACCATCTTGTTAACTATTGATTCCAGTGACCTGACTCCCTGCAAGTCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000398006.6
ENST00000524671.1
ENST00000525910.1
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
3UTR-3UTR GCA 90 bp TTGCAGGGAGTCAGGTCACTGGAATCAATAGTTAACAAGATGGTTGTCCTTTGGTTACAGGCGATGACTTaGAGGGAGTCAGGTCACTGG +
Preference number: 2 (lower is better)
Translates to: LQGVRSLESIVNKMVVLWLQAMT*RESGHW
Trigger: CCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAA...CCAAAGGACAACCATCTTGTTAACTATTGATTCCAGTGACCTGACTCCCTGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000398006.6
ENST00000524671.1
ENST00000525910.1
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
3UTR-3UTR GCA 90 bp TACAGATACACCAGAAAGCCTCTGAAATCCAACGATGCCATACGGAAGTCTGATAGGTCTGCTAGGAGCTaGCAAACAGCTTTGGTGGAG +
Preference number: 2 (lower is better)
Translates to: YRYTRKPLKSNDAIRKSDRSARS*QTALVE
Trigger: CTCCACCAAAGCTGTTTGGCAGCTCCTAGCAGACCT...ATCAGACTTCCGTATGGCATCGTTGGATTTCAGAGGCTTTCTGGTGTATCTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
3UTR-3UTR GCA 90 bp ATTTTGGTAGCAGATGCCTACCGTGCAGACTGGTTCAGTAATGGTACTCAGCATACTAGAAGTGCCCCATaGAGGATGTGCCTCACAACA +
Preference number: 2 (lower is better)
Translates to: ILVADAYRADWFSNGTQHTRSAP*RMCLTT
Trigger: TGTTGTGAGGCACATCCTGCATGGGGCACTTCTAGT...ATGCTGAGTACCATTACTGAACCAGTCTGCACGGTAGGCATCTGCTACCAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
3UTR-3UTR GCA 90 bp GGGGCCACAGGTGTGTTGCTAACCTCCACTTTTCTTCCTGATTTGCTTTGCTTTTACAAGTCAGCTGTCTaGAGCCAGAAAGATGGCCTT +
Preference number: 2 (lower is better)
Translates to: GATGVLLTSTFLPDLLCFYKSAV*SQKDGL
Trigger: AAGGCCATCTTTCTGGCTGCAGACAGCTGACTTGTA...AAAGCAAAGCAAATCAGGAAGAAAAGTGGAGGTTAGCAACACACCTGTGGCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524671.1
3UTR-3UTR CCA 90 bp GTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAATCAATAGTTAACAAGGTGGAGAAGCCCATATaGCCTAAGAGAGGCTTGCTA +
Preference number: 2 (lower is better)
Translates to: VTGDDLQGVRSLESIVNKVEKPI*PKRGLL
Trigger: TAGCAAGCCTCTCTTAGGCCATATGGGCTTCTCCAC...CTTGTTAACTATTGATTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616540.5
3UTR-3UTR CCA 90 bp AATGACAAGAGCCCAAACAGGAAGACAGTTCCTAATGCCAGCCAATTCGATGTCAAGATGGTTGTCCTTTaGGGCCACAGGTGTGTTGCT +
Preference number: 2 (lower is better)
Translates to: NDKSPNRKTVPNASQFDVKMVVL*GHRCVA
Trigger: AGCAACACACCTGTGGCCCCAAAGGACAACCATCTT...GACATCGAATTGGCTGGCATTAGGAACTGTCTTCCTGTTTGGGCTCTTGTCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619129.4
3UTR-3UTR TCA 90 bp ACTGCTACTCTGAGCAGGTGTGTTGAAACTGTTTTTCCCAGGCAAAGCTATCCTCTTCAACTCCGTCTCTaGTATTCCTGCAGAGGAGAT +
Preference number: 2 (lower is better)
Translates to: TATLSRCVETVFPRQSYPLQLRL*YSCRGD
Trigger: ATCTCCTCTGCAGGAATATCAGAGACGGAGTTGAAG...AGGATAGCTTTGCCTGGGAAAAACAGTTTCAACACACCTGCTCAGAGTAGCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
3UTR-3UTR TCA 90 bp ACAAGATGGTTGTCCTTTGGGGCCACAGGTGTGTTGCTAACCTCCACTTTTCTTCACTGTATACTGATCTaGCAGGAAGGGGACATAGAA +
Preference number: 2 (lower is better)
Translates to: TRWLSFGATGVLLTSTFLHCILI*QEGDIE
Trigger: TTCTATGTCCCCTTCCTGTCAGATCAGTATACAGTG...AAGAAAAGTGGAGGTTAGCAACACACCTGTGGCCCCAAAGGACAACCATCTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000524671.1
ENST00000525910.1
ENST00000619129.4
3UTR-3UTR GCA 90 bp ATAGTTAACAAGATGGTTGTCCTTTGGGGCCACAGGTGTGTTGCTAACCTCCACCTTCCTGATTTGCTTTaGTTTCCGGGGTTTGAGGAT +
Preference number: 2 (lower is better)
Translates to: IVNKMVVLWGHRCVANLHLPDLL*FPGFED
Trigger: ATCCTCAAACCCCGGAAAGCAAAGCAAATCAGGAAG...GTGGAGGTTAGCAACACACCTGTGGCCCCAAAGGACAACCATCTTGTTAACTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000524671.1
ENST00000525910.1
ENST00000619129.4
3UTR-3UTR GCA 90 bp GTTAACAAGATGGTTGTCCTTTGGGGCCACAGGTGTGTTGCTAACCTCCACTTTGCTAGCTTGTCTTCTTaGAGCCATGTGAGGATACAA +
Preference number: 2 (lower is better)
Translates to: VNKMVVLWGHRCVANLHFASLSS*SHVRIQ
Trigger: TTGTATCCTCACATGGCTGCAAGAAGACAAGCTAGC...AAAGTGGAGGTTAGCAACACACCTGTGGCCCCAAAGGACAACCATCTTGTTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524671.1
3UTR-3UTR GCA 90 bp GGTTGGGTCTGTAGCAATTCGGTAAAATTCTGGATACAAATCAAGGGGCCCGTGATCATTCGACTCACGTaGAACCCAAACTTCTTGCAC +
Preference number: 2 (lower is better)
Translates to: GWVCSNSVKFWIQIKGPVIIRLT*NPNFLH
Trigger: GTGCAAGAAGTTTGGGTTGCACGTGAGTCGAATGAT...CACGGGCCCCTTGATTTGTATCCAGAATTTTACCGAATTGCTACAGACCCAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619129.4
3UTR-3UTR CCA 90 bp ATCTTTCAAGCAAGGGGGAGCCCAGTCTATCCTCACACACTCCCCAGTTATTGTAGCTCTATTACTTACTaGCTGTGTGACCTTAGGCAA +
Preference number: 2 (lower is better)
Translates to: IFQARGSPVYPHTLPSYCSSITY*LCDLRQ
Trigger: TTGCCTAAGGTCACACAGCCAGTAAGTAATAGAGCT...ACAATAACTGGGGAGTGTGTGAGGATAGACTGGGCTCCCCCTTGCTTGAAAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
3UTR-3UTR CCA 90 bp CCACATGTTGTGACTGTGAGGATCAAACGAGATGCTGTGAAAGTGCCTTGTAAAGAGAGTAAGGAAACCTaGGTTCCAGTCCCAGCTCTA +
Preference number: 2 (lower is better)
Translates to: PHVVTVRIKRDAVKVPCKESKET*VPVPAL
Trigger: TAGAGCTGGGACTGGAACCCAGGTTTCCTTACTCTC...TTTACAAGGCACTTTCACAGCATCTCGTTTGATCCTCACAGTCACAACATGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
3UTR-3UTR CCA 90 bp GATGACTTGCAGGGAGTCAGGTCACTGGAATCAATAGTTAACAAGATGGTTGTCAAGATGGTTGTCCTTTaGGGCCACAGGTGTGTTGCT +
Preference number: 2 (lower is better)
Translates to: DDLQGVRSLESIVNKMVVKMVVL*GHRCVA
Trigger: AGCAACACACCTGTGGCCCCAAAGGACAACCATCTT...GACAACCATCTTGTTAACTATTGATTCCAGTGACCTGACTCCCTGCAAGTCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524671.1
ENST00000525910.1
ENST00000619129.4
3UTR CAA 90 bp TCCCACATCCCTCTATACTCCACAATCTATGGAGAAATAAGTATCTaGCATGCTTCCTCCTTTTGGCAAGCAGAACAGTCAGTGCAGGCT +
Preference number: 2 (lower is better)
Translates to: SHIPLYSTIYGEISI*HASSFWQAEQSVQA
Trigger: AGCCTGCACTGACTGTTCTGCTTGCCAAAAGGAGGAAGCATGCAAGATACTTATTTCTCCATAGATTGTGGAGTATAGAGGGATGTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
3UTR-3UTR GCA 90 bp TCAGAGAACCATGCATTTGCCAAGTATACCTACTCCCTCACTCACCCCATGATCGGGATAAAAATCACCTaGCTTGTCTACCACATGTTG +
Preference number: 2 (lower is better)
Translates to: SENHAFAKYTYSLTHPMIGIKIT*LVYHML
Trigger: CAACATGTGGTAGACAAGGCAGGTGATTTTTATCCC...GATCATGGGGTGAGTGAGGGAGTAGGTATACTTGGCAAATGCATGGTTCTCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
3UTR-3UTR CCA 90 bp GTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAATCAATAGTTAACAAGAAAGGACATGTGGGTTaGCAACTAGGCTGTGTTCAT +
Preference number: 2 (lower is better)
Translates to: VTGDDLQGVRSLESIVNKKGHVG*QLGCVH
Trigger: ATGAACACAGCCTAGTTGCCAACCCACATGTCCTTT...CTTGTTAACTATTGATTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616540.5
3UTR-3UTR CCA 90 bp GTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAATCAATAGTTAACAAGTTGGAGGTGGGCCTTTaGAAGGGAATTAGGTCAAAA +
Preference number: 2 (lower is better)
Translates to: VTGDDLQGVRSLESIVNKLEVGL*KGIRSK
Trigger: TTTTGACCTAATTCCCTTCCAAAGGCCCACCTCCAA...CTTGTTAACTATTGATTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524671.1
3UTR-3UTR TCA 90 bp ACTGCTACTCTGAGCAGGTGTGTTGAAACTGTTTTTCCCAGGCAAAGCTATCCTGCTATAAATATACACTaGTCCTTTTCACTGGGGGTG +
Preference number: 2 (lower is better)
Translates to: TATLSRCVETVFPRQSYPAINIH*SFSLGV
Trigger: CACCCCCAGTGAAAAGGATCAGTGTATATTTATAGC...AGGATAGCTTTGCCTGGGAAAAACAGTTTCAACACACCTGCTCAGAGTAGCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
3UTR-3UTR TCA 90 bp TGTCTACCACATGTTGTGACTGTGAGGATCAAACGAGATGCTGTGAAAGTGCCTGCTATAAATATACACTaGTCCTTTTCACTGGGGGTG +
Preference number: 2 (lower is better)
Translates to: CLPHVVTVRIKRDAVKVPAINIH*SFSLGV
Trigger: CACCCCCAGTGAAAAGGATCAGTGTATATTTATAGC...AGGCACTTTCACAGCATCTCGTTTGATCCTCACAGTCACAACATGTGGTAGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
3UTR-3UTR TCA 90 bp TGTCTACCACATGTTGTGACTGTGAGGATCAAACGAGATGCTGTGAAAGTGCCTGTTTTCATGGTTGAGTaGGGAATATGGAGGAGCAAT +
Preference number: 2 (lower is better)
Translates to: CLPHVVTVRIKRDAVKVPVFMVE*GIWRSN
Trigger: ATTGCTCCTCCATATTCCTCACTCAACCATGAAAAC...AGGCACTTTCACAGCATCTCGTTTGATCCTCACAGTCACAACATGTGGTAGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
3UTR-3UTR TCA 90 bp TTGCAGGGAGTCAGGTCACTGGAATCAATAGTTAACAAGATGGTTGTCCTTTGGCACTGTATACTGATCTaGCAGGAAGGGGACATAGAA +
Preference number: 2 (lower is better)
Translates to: LQGVRSLESIVNKMVVLWHCILI*QEGDIE
Trigger: TTCTATGTCCCCTTCCTGTCAGATCAGTATACAGTG...CCAAAGGACAACCATCTTGTTAACTATTGATTCCAGTGACCTGACTCCCTGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000524671.1
ENST00000525910.1
ENST00000619129.4
3UTR-3UTR TCA 90 bp GGATGGTGTAGTTTACGTACACTGTATACTGATCTGACAGGAAGGGGACATAGACACTGTATACTGATCTaGCAGGAAGGGGACATAGAA +
Preference number: 2 (lower is better)
Translates to: GWCSLRTLYTDLTGRGHRHCILI*QEGDIE
Trigger: TTCTATGTCCCCTTCCTGTCAGATCAGTATACAGTG...TCTATGTCCCCTTCCTGTCAGATCAGTATACAGTGTACGTAAACTACACCATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000524671.1
ENST00000525910.1
ENST00000619129.4
3UTR-3UTR CCA 90 bp ACTGCTACTCTGAGCAGGTGTGTTGAAACTGTTTTTCCCAGGCAAAGCTATCCTAGCTCTATTACTTACTaGCTGTGTGACCTTAGGCAA +
Preference number: 2 (lower is better)
Translates to: TATLSRCVETVFPRQSYPSSITY*LCDLRQ
Trigger: TTGCCTAAGGTCACACAGCCAGTAAGTAATAGAGCT...AGGATAGCTTTGCCTGGGAAAAACAGTTTCAACACACCTGCTCAGAGTAGCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
3UTR-3UTR CCA 90 bp TCATTTCTATATTCCTTACCTATAACATTTGGCACAGCGTTCTGCCATGTATTGTCCCAGCTACTCGGGTaGCTGAGGCATGAGAATTGC +
Preference number: 2 (lower is better)
Translates to: SFLYSLPITFGTAFCHVLSQLLG*LRHENC
Trigger: GCAATTCTCATGCCTCAGCCACCCGAGTAGCTGGGA...CAATACATGGCAGAACGCTGTGCCAAATGTTATAGGTAAGGAATATAGAAATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
3UTR-3UTR TCA 90 bp TATTCCTGCAGAGGAGATCTCAAAGAGGAGCTTTTTAATATTGTAACTAGCCATTGGTCACCTTTTTCCTaGGATAGCTCCAGGACAGGG +
Preference number: 2 (lower is better)
Translates to: YSCRGDLKEELFNIVTSHWSPFS*DSSRTG
Trigger: CCCTGTCCTGGAGCTATCTCAGGAAAAAGGTGACCA...ATGGCTAGTTACAATATTAAAAAGCTCCTCTTTGAGATCTCCTCTGCAGGAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
3UTR-3UTR TCA 90 bp GTCTTGCTGGAGGTGAAAAGGACATGTGGGTTGGCAACTAGGCTGTGTTCATTTACAGAGGAAAAACAATaGGATGTGGAGCAATATATC +
Preference number: 2 (lower is better)
Translates to: VLLEVKRTCGLATRLCSFTEEKQ*DVEQYI
Trigger: GATATATTGCTCCACATCTCATTGTTTTTCCTCTGT...AAATGAACACAGCCTAGTTGCCAACCCACATGTCCTTTTCACCTCCAGCAAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616540.5
3UTR-3UTR TCA 90 bp GTAAACTTGAGCCATGGTGGTTTGCTGCACAGATCAACCCATCACCTAGATATTGCTCCCATTTATAAGTaGGAAGATGTGGTGTTTGGT +
Preference number: 2 (lower is better)
Translates to: VNLSHGGLLHRSTHHLDIAPIYK*EDVVFG
Trigger: ACCAAACACCACATCTTCTCACTTATAAATGGGAGC...AATATCTAGGTGATGGGTTGATCTGTGCAGCAAACCACCATGGCTCAAGTTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618252.1
3UTR-3UTR GCA 90 bp CCATGTATTGTGCTCTCACTAAAGACATACATAGAACAGAGAGATCCAAAATCACACACAGCACTGCTGTaGTGGTCTAACACACAGGCA +
Preference number: 2 (lower is better)
Translates to: PCIVLSLKTYIEQRDPKSHTALL*WSNTQA
Trigger: TGCCTGTGTGTTAGACCAGCACAGCAGTGCTGTGTG...TGATTTTGGATCTCTCTGTTCTATGTATGTCTTTAGTGAGAGCACAATACATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
3UTR-3UTR GCA 90 bp ATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAATCAATACTTCCTGATTTGCTTTaGTTTCCGGGGTTTGAGGAT +
Preference number: 2 (lower is better)
Translates to: ITNVTGDDLQGVRSLESILPDLL*FPGFED
Trigger: ATCCTCAAACCCCGGAAAGCAAAGCAAATCAGGAAG...TATTGATTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000524671.1
ENST00000525910.1
ENST00000619129.4
3UTR-3UTR GCA 90 bp GTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAATCAATAGTTAACAAGTTTAGGGCCTTTCTCTaGCTAGCTGCAAAAAGTTTA +
Preference number: 2 (lower is better)
Translates to: VTGDDLQGVRSLESIVNKFRAFL*LAAKSL
Trigger: TAAACTTTTTGCAGCTAGGCAGAGAAAGGCCCTAAA...CTTGTTAACTATTGATTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616540.5
3UTR-3UTR CCA 90 bp TCATTTCTATATTCCTTACCTATAACATTTGGCACAGCGTTCTGCCATGTATTGTGCCAGGCCAGAGTGTaGAGAACAGCTTATCACAGC +
Preference number: 2 (lower is better)
Translates to: SFLYSLPITFGTAFCHVLCQARV*RTAYHS
Trigger: GCTGTGATAAGCTGTTCTCCACACTCTGGCCTGGCA...CAATACATGGCAGAACGCTGTGCCAAATGTTATAGGTAAGGAATATAGAAATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
3UTR-3UTR CCA 90 bp TCATTTCTATATTCCTTACCTATAACATTTGGCACAGCGTTCTGCCATGTATTGACAGCACTGCTGTGCTaGTCTAACACACAGGCAGAC +
Preference number: 2 (lower is better)
Translates to: SFLYSLPITFGTAFCHVLTALLC*SNTQAD
Trigger: GTCTGCCTGTGTGTTAGACCAGCACAGCAGTGCTGT...CAATACATGGCAGAACGCTGTGCCAAATGTTATAGGTAAGGAATATAGAAATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
3UTR-3UTR CCA 90 bp TCATTTCTATATTCCTTACCTATAACATTTGGCACAGCGTTCTGCCATGTATTGAGAATTGCTTCAACCTaGGAGGCAGAGGTTGCAGCG +
Preference number: 2 (lower is better)
Translates to: SFLYSLPITFGTAFCHVLRIAST*EAEVAA
Trigger: CGCTGCAACCTCTGCCTCCCAGGTTGAAGCAATTCT...CAATACATGGCAGAACGCTGTGCCAAATGTTATAGGTAAGGAATATAGAAATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
3UTR-3UTR TCA 90 bp TCGATGTCACAGTATAGTGCTCCAGGCGATATCGTTGAAACACAAAGTGGTAACAATCTCTCCTCTTTGTaGGGCTGGATGAAGAAAATT +
Preference number: 2 (lower is better)
Translates to: SMSQYSAPGDIVETQSGNNLSSL*GWMKKI
Trigger: AATTTTCTTCATCCAGCCTCACAAAGAGGAGAGATT...GTTACCACTTTGTGTTTCAACGATATCGCCTGGAGCACTATACTGTGACATCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613181.4
ENST00000619129.4
3UTR-3UTR GCA 90 bp CAATATCAGTTAGGTCTCTGGTTAACCTCATCAGTCCTTTCAAGTAATGTTTTCTTGCTAGTTCTCAGATaGCAGGCCAGAGTGTGGAGA +
Preference number: 2 (lower is better)
Translates to: QYQLGLWLTSSVLSSNVFLLVLR*QARVWR
Trigger: TCTCCACACTCTGGCCTGGCATCTGAGAACTAGCAA...GAAAACATTACTTGAAAGGACTGATGAGGTTAACCAGAGACCTAACTGATATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
3UTR-3UTR GCA 90 bp ATTTTGGTAGCAGATGCCTACCGTGCAGACTGGTTCAGTAATGGTACTCAGCATGAAATCAGAGAACCATaGATTTGCCAAGTATACCTA +
Preference number: 2 (lower is better)
Translates to: ILVADAYRADWFSNGTQHEIREP*ICQVYL
Trigger: TAGGTATACTTGGCAAATGCATGGTTCTCTGATTTC...ATGCTGAGTACCATTACTGAACCAGTCTGCACGGTAGGCATCTGCTACCAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
3UTR-3UTR GCA 90 bp ATACCATCCAGTCATGGCTATCAACGTAGTGTACATACAGAAGCTACTAGGAAGGCAACCCAAACTTCTTaGACACAGCCTTGTAAAAGT +
Preference number: 2 (lower is better)
Translates to: IPSSHGYQRSVHTEATRKATQTS*TQPCKS
Trigger: ACTTTTACAAGGCTGTGTGCAAGAAGTTTGGGTTGC...CTTCCTAGTAGCTTCTGTATGTACACTACGTTGATAGCCATGACTGGATGGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612489.1
ENST00000619129.4
3UTR-3UTR GCA 90 bp TCGATGTCACAGTATAGTGCTCCAGGCGATATCGTTGAAACACAAAGTGGTAACAACAATGTTGAGTGGTaGAATCACCAACTTCCCATA +
Preference number: 2 (lower is better)
Translates to: SMSQYSAPGDIVETQSGNNNVEW*NHQLPI
Trigger: TATGGGAAGTTGGTGATTGCACCACTCAACATTGTT...GTTACCACTTTGTGTTTCAACGATATCGCCTGGAGCACTATACTGTGACATCGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613181.4
ENST00000619129.4
3UTR-3UTR CCA 90 bp TTCATTTCTATATTCCTTACCTATAACATTTGGCACAGCGTTCTGCCATGTATTGCTGCCAAACAGCTTTaGTGGAGAAGCCCATATGGC +
Preference number: 2 (lower is better)
Translates to: FISIFLTYNIWHSVLPCIAAKQL*WRSPYG
Trigger: GCCATATGGGCTTCTCCACCAAAGCTGTTTGGCAGC...AATACATGGCAGAACGCTGTGCCAAATGTTATAGGTAAGGAATATAGAAATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
3UTR-3UTR CCA 90 bp CCATGTATTGTGCTCTCACTAAAGACATACATAGAACAGAGAGATCCAAAATCAGAGAGTAAGGAAACCTaGGTTCCAGTCCCAGCTCTA +
Preference number: 2 (lower is better)
Translates to: PCIVLSLKTYIEQRDPKSESKET*VPVPAL
Trigger: TAGAGCTGGGACTGGAACCCAGGTTTCCTTACTCTC...TGATTTTGGATCTCTCTGTTCTATGTATGTCTTTAGTGAGAGCACAATACATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
3UTR-3UTR TCA 90 bp TTCATTTCTATATTCCTTACCTATAACATTTGGCACAGCGTTCTGCCATGTATTAAATGTTACAGGCGATaGCTTGCAGGGAGTCAGGTC +
Preference number: 2 (lower is better)
Translates to: FISIFLTYNIWHSVLPCIKCYRR*LAGSQV
Trigger: GACCTGACTCCCTGCAAGTCATCGCCTGTAACATTT...AATACATGGCAGAACGCTGTGCCAAATGTTATAGGTAAGGAATATAGAAATGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616540.5
3UTR-3UTR TCA 90 bp TATTCCTGCAGAGGAGATCTCAAAGAGGAGCTTTTTAATATTGTAACTAGCCATAAGGCACCTATAATGTaGCCCCAGATTGACTACAGG +
Preference number: 2 (lower is better)
Translates to: YSCRGDLKEELFNIVTSHKAPIM*PQIDYR
Trigger: CCTGTAGTCAATCTGGGGTCACATTATAGGTGCCTT...ATGGCTAGTTACAATATTAAAAAGCTCCTCTTTGAGATCTCCTCTGCAGGAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
3UTR-3UTR TCA 90 bp TATTCCTGCAGAGGAGATCTCAAAGAGGAGCTTTTTAATATTGTAACTAGCCATCTTCAACTCCGTCTCTaGTATTCCTGCAGAGGAGAT +
Preference number: 2 (lower is better)
Translates to: YSCRGDLKEELFNIVTSHLQLRL*YSCRGD
Trigger: ATCTCCTCTGCAGGAATATCAGAGACGGAGTTGAAG...ATGGCTAGTTACAATATTAAAAAGCTCCTCTTTGAGATCTCCTCTGCAGGAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
3UTR-3UTR CCA 90 bp ACTGCTACTCTGAGCAGGTGTGTTGAAACTGTTTTTCCCAGGCAAAGCTATCCTCAAGTAATGTTTTCATaGTTGAGTGAGGAATATGGA +
Preference number: 2 (lower is better)
Translates to: TATLSRCVETVFPRQSYPQVMFS*LSEEYG
Trigger: TCCATATTCCTCACTCAACCATGAAAACATTACTTG...AGGATAGCTTTGCCTGGGAAAAACAGTTTCAACACACCTGCTCAGAGTAGCAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
3UTR-3UTR CCA 90 bp ATTTTGGTAGCAGATGCCTACCGTGCAGACTGGTTCAGTAATGGTACTCAGCATCTAGAACTCCAAAGTTaGAAAAATGACCCAGATAAA +
Preference number: 2 (lower is better)
Translates to: ILVADAYRADWFSNGTQHLELQS*KNDPDK
Trigger: TTTATCTGGGTCATTTTTCCAACTTTGGAGTTCTAG...ATGCTGAGTACCATTACTGAACCAGTCTGCACGGTAGGCATCTGCTACCAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
3UTR-3UTR CCA 90 bp CAAGTAATGTTTTCATGGTTGAGTGAGGAATATGGAGGAGCAATAGATGAGAGTATTCTTCCTGTAAGTTaGTTCTGCTCTTCTCCGGTC +
Preference number: 2 (lower is better)
Translates to: QVMFSWLSEEYGGAIDESILPVS*FCSSPV
Trigger: GACCGGAGAAGAGCAGAACCAACTTACAGGAAGAAT...ACTCTCATCTATTGCTCCTCCATATTCCTCACTCAACCATGAAAACATTACTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616540.5
3UTR-3UTR TCA 90 bp TCATTTCTATATTCCTTACCTATAACATTTGGCACAGCGTTCTGCCATGTATTGAGGGTCCTAGTCCTGTaGAGTGCTTTAAAGAAGCTT +
Preference number: 2 (lower is better)
Translates to: SFLYSLPITFGTAFCHVLRVLVL*SALKKL
Trigger: AAGCTTCTTTAAAGCACTTCACAGGACTAGGACCCT...CAATACATGGCAGAACGCTGTGCCAAATGTTATAGGTAAGGAATATAGAAATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
3UTR-3UTR TCA 90 bp CCATGTATTGTGCTCTCACTAAAGACATACATAGAACAGAGAGATCCAAAATCAGGCTGCAAAAGAACATaGCTTCCAAACAGAAGCACT +
Preference number: 2 (lower is better)
Translates to: PCIVLSLKTYIEQRDPKSGCKRT*LPNRST
Trigger: AGTGCTTCTGTTTGGAAGTCATGTTCTTTTGCAGCC...TGATTTTGGATCTCTCTGTTCTATGTATGTCTTTAGTGAGAGCACAATACATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
3UTR-3UTR TCA 90 bp TCATTTCTATATTCCTTACCTATAACATTTGGCACAGCGTTCTGCCATGTATTGGGCTGCAAAAGAACATaGCTTCCAAACAGAAGCACT +
Preference number: 2 (lower is better)
Translates to: SFLYSLPITFGTAFCHVLGCKRT*LPNRST
Trigger: AGTGCTTCTGTTTGGAAGTCATGTTCTTTTGCAGCC...CAATACATGGCAGAACGCTGTGCCAAATGTTATAGGTAAGGAATATAGAAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
3UTR CAA 90 bp TATTCATGTCAGAAGACCTTTATTACAAATGTTACAGGCGATGACTaGCAGGGAGTCAGGTCACTGGAATCAATAGTTAACAAGATGGTT +
Preference number: 2 (lower is better)
Translates to: YSCQKTFITNVTGDD*QGVRSLESIVNKMV
Trigger: AACCATCTTGTTAACTATTGATTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTTCTGACATGAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
3UTR-3UTR TCA 90 bp TCATTTCTATATTCCTTACCTATAACATTTGGCACAGCGTTCTGCCATGTATTGGTTTTCATGGTTGAGTaGGGAATATGGAGGAGCAAT +
Preference number: 2 (lower is better)
Translates to: SFLYSLPITFGTAFCHVLVFMVE*GIWRSN
Trigger: ATTGCTCCTCCATATTCCTCACTCAACCATGAAAAC...CAATACATGGCAGAACGCTGTGCCAAATGTTATAGGTAAGGAATATAGAAATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
3UTR-3UTR CCA 90 bp CCATGTATTGTGCTCTCACTAAAGACATACATAGAACAGAGAGATCCAAAATCATATTTGGATCCTGTGTaGCTGCAAAAGAACATGACT +
Preference number: 2 (lower is better)
Translates to: PCIVLSLKTYIEQRDPKSYLDPV*LQKNMT
Trigger: AGTCATGTTCTTTTGCAGCCACACAGGATCCAAATA...TGATTTTGGATCTCTCTGTTCTATGTATGTCTTTAGTGAGAGCACAATACATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
3UTR-3UTR CCA 90 bp TCATTTCTATATTCCTTACCTATAACATTTGGCACAGCGTTCTGCCATGTATTGGTTGATATCTTCACATaGAGGAGTCTAGAATTCAAA +
Preference number: 2 (lower is better)
Translates to: SFLYSLPITFGTAFCHVLVDIFT*RSLEFK
Trigger: TTTGAATTCTAGACTCCTCCATGTGAAGATATCAAC...CAATACATGGCAGAACGCTGTGCCAAATGTTATAGGTAAGGAATATAGAAATGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
3UTR GCA 72 bp CTGCCACAGGTCAGGCTGCATCACACAGCACTGCTGTaGTGGTCTAACACACAGGCAGACTGGAGGCTCCAA +
Preference number: 3 (lower is better)
Translates to: LPQVRLHHTALL*WSNTQADWRLQ
Trigger: TTGGAGCCTCCAGTCTGCCTGTGTGTTAGACCAGCACAGCAGTGCTGTGTGATGCAGCCTGACCTGTGGCAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
3UTR GCA 72 bp CAAACAGAAGCACTACTTTCCTGCCACAGGTCAGGCTaGATCACACAGCACTGCTGTGCTGGTCTAACACAC +
Preference number: 3 (lower is better)
Translates to: QTEALLSCHRSG*ITQHCCAGLTH
Trigger: GTGTGTTAGACCAGCACAGCAGTGCTGTGTGATGCAGCCTGACCTGTGGCAGGAAAGTAGTGCTTCTGTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
3UTR-3UTR CAA 90 bp ACACTGTATACTGATCTGACAGGAAGGGGACATAGAATGCCCGCAGCAGCTTTGGTTACAGGCGATGACTaGCAGGGAGTCAGGTCACTG +
Preference number: 3 (lower is better)
Translates to: TLYTDLTGRGHRMPAAALVTGDD*QGVRSL
Trigger: CAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAAC...CAAAGCTGCTGCGGGCATTCTATGTCCCCTTCCTGTCAGATCAGTATACAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000524671.1
ENST00000525910.1
ENST00000619129.4
3UTR-3UTR CAA 90 bp GTCAGGCTGCATCACACAGCACTGCTGTGCTGGTCTAACACACAGGCAGACTGGCTTATCATTGCCTATTaGACTAGAAGTGCCCCATGC +
Preference number: 3 (lower is better)
Translates to: VRLHHTALLCWSNTQADWLIIAY*TRSAPC
Trigger: GCATGGGGCACTTCTAGTCAAATAGGCAATGATAAG...CCAGTCTGCCTGTGTGTTAGACCAGCACAGCAGTGCTGTGTGATGCAGCCTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
3UTR-3UTR CAA 90 bp GTCAGGCTGCATCACACAGCACTGCTGTGCTGGTCTAACACACAGGCAGACTGGAATTCTTCCTGTAAGTaGGTTCTGCTCTTCTCCGGT +
Preference number: 3 (lower is better)
Translates to: VRLHHTALLCWSNTQADWNSSCK*VLLFSG
Trigger: ACCGGAGAAGAGCAGAACCAACTTACAGGAAGAATT...CCAGTCTGCCTGTGTGTTAGACCAGCACAGCAGTGCTGTGTGATGCAGCCTGAC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616540.5
3UTR-3UTR CAA 90 bp TTACGTACACTGTATACTGATCTGACAGGAAGGGGACATAGAATGCCCGCAGCAGTTACAGGCGATGACTaGCAGGGAGTCAGGTCACTG +
Preference number: 3 (lower is better)
Translates to: LRTLYTDLTGRGHRMPAAVTGDD*QGVRSL
Trigger: CAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAAC...TGCTGCGGGCATTCTATGTCCCCTTCCTGTCAGATCAGTATACAGTGTACGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000524671.1
ENST00000525910.1
ENST00000619129.4
3UTR-3UTR CAA 90 bp TTTGGGGCCACAGGTGTGTTGCTAACCTCCACTTTTCTTCCTGATTTGCTTTGCCAAGATGGTTGTCCTTaGGGGCCACAGGTGTGTTGC +
Preference number: 3 (lower is better)
Translates to: FGATGVLLTSTFLPDLLCQDGCP*GPQVCC
Trigger: GCAACACACCTGTGGCCCCAAAGGACAACCATCTTG...GCAAAGCAAATCAGGAAGAAAAGTGGAGGTTAGCAACACACCTGTGGCCCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000524671.1
ENST00000525910.1
ENST00000619129.4
3UTR-3UTR CAA 90 bp CGCTTCAACTCCGTCTCTGATATTCCTGCAGAGGAGATCTCAAAGAGGAGCTTTAGCTGCCAAACAGCTTaGGTGGAGAAGCCCATATGG +
Preference number: 3 (lower is better)
Translates to: RFNSVSDIPAEEISKRSFSCQTA*VEKPIW
Trigger: CCATATGGGCTTCTCCACCAAAGCTGTTTGGCAGCT...AAAGCTCCTCTTTGAGATCTCCTCTGCAGGAATATCAGAGACGGAGTTGAAGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
3UTR TCA 72 bp GAGGCTAGAGAGCTAGCTTGTCTTCTTGCAGCCATGTaGGGATACAAGTCAGCTGTCTGCAGCCAGAAAGAT +
Preference number: 3 (lower is better)
Translates to: EARELACLLAAM*GYKSAVCSQKD
Trigger: ATCTTTCTGGCTGCAGACAGCTGACTTGTATCCTCACATGGCTGCAAGAAGACAAGCTAGCTCTCTAGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524671.1
3UTR-3UTR CAA 90 bp TTGCAGGGAGTCAGGTCACTGGAATCAATAGTTAACAAGATGGTTGTCCTTTGGGTTACAGGCGATGACTaGCAGGGAGTCAGGTCACTG +
Preference number: 3 (lower is better)
Translates to: LQGVRSLESIVNKMVVLWVTGDD*QGVRSL
Trigger: CAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAAC...CCAAAGGACAACCATCTTGTTAACTATTGATTCCAGTGACCTGACTCCCTGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000398006.6
ENST00000524671.1
ENST00000525910.1
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
3UTR-3UTR CAA 90 bp GATGACTTGCAGGGAGTCAGGTCACTGGAATCAATAGTTAACAAGATGGTTGTCGTTACAGGCGATGACTaGCAGGGAGTCAGGTCACTG +
Preference number: 3 (lower is better)
Translates to: DDLQGVRSLESIVNKMVVVTGDD*QGVRSL
Trigger: CAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAAC...GACAACCATCTTGTTAACTATTGATTCCAGTGACCTGACTCCCTGCAAGTCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000398006.6
ENST00000524671.1
ENST00000525910.1
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
3UTR-3UTR CAA 90 bp GTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAATCAATAGTTAACAAGGGGGCCACAGGTGTGTaGCTAACCTCCACTTTTCTT +
Preference number: 3 (lower is better)
Translates to: VTGDDLQGVRSLESIVNKGATGV*LTSTFL
Trigger: AAGAAAAGTGGAGGTTAGCAACACACCTGTGGCCCC...CTTGTTAACTATTGATTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000524671.1
ENST00000525910.1
ENST00000619129.4
3UTR TCA 72 bp AGACCTATTACCTCTCCAGCGCTTCAACTCCGTCTCTaGTATTCCTGCAGAGGAGATCTCAAAGAGGAGCTT +
Preference number: 3 (lower is better)
Translates to: RPITSPALQLRL*YSCRGDLKEEL
Trigger: AAGCTCCTCTTTGAGATCTCCTCTGCAGGAATATCAGAGACGGAGTTGAAGCGCTGGAGAGGTAATAGGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
3UTR TCA 72 bp GAGGATGGTGTAGTTTACGTACACTGTATACTGATCTaGCAGGAAGGGGACATAGAATGCCCGCAGCAGCTT +
Preference number: 3 (lower is better)
Translates to: EDGVVYVHCILI*QEGDIECPQQL
Trigger: AAGCTGCTGCGGGCATTCTATGTCCCCTTCCTGTCAGATCAGTATACAGTGTACGTAAACTACACCATCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000524671.1
ENST00000525910.1
ENST00000619129.4
3UTR TCA 72 bp GGCACCAGAAATAGTATGAGGGCCATCAGCGACCAATaGAAGAAACTCTTCCACCTGTGTTTCATGACCAGC +
Preference number: 3 (lower is better)
Translates to: GTRNSMRAISDQ*KKLFHLCFMTS
Trigger: GCTGGTCATGAAACACAGGTGGAAGAGTTTCTTTCATTGGTCGCTGATGGCCCTCATACTATTTCTGGTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613181.4
ENST00000619129.4
3UTR GCA 72 bp AGCATGAGGATTTCAATAAGAAGGTCTGCTAGGAGCTaGCAAACAGCTTTGGTGGAGAAGCCCATATGGCCT +
Preference number: 3 (lower is better)
Translates to: SMRISIRRSARS*QTALVEKPIWP
Trigger: AGGCCATATGGGCTTCTCCACCAAAGCTGTTTGGCAGCTCCTAGCAGACCTTCTTATTGAAATCCTCATGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
3UTR CCA 72 bp ACAGCACTGCTGTGCTGGTCTAACACACAGGCAGACTaGAGGCTCCAAAGAACTCAAATACAGACACAATTC +
Preference number: 3 (lower is better)
Translates to: TALLCWSNTQAD*RLQRTQIQTQF
Trigger: GAATTGTGTCTGTATTTGAGTTCTTTGGAGCCTCCAGTCTGCCTGTGTGTTAGACCAGCACAGCAGTGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
3UTR CCA 72 bp GCCCGCAGCAGCTTTGAAGATCTATGTGATGGTATTTaGAGGTGGGCCTTTGGAAGGGAATTAGGTCAAAAG +
Preference number: 3 (lower is better)
Translates to: ARSSFEDLCDGI*RWAFGRELGQK
Trigger: CTTTTGACCTAATTCCCTTCCAAAGGCCCACCTCCAAATACCATCACATAGATCTTCAAAGCTGCTGCGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524671.1
3UTR-3UTR CAA 90 bp CGCTTCAACTCCGTCTCTGATATTCCTGCAGAGGAGATCTCAAAGAGGAGCTTTAAAAGGACATGTGGGTaGGCAACTAGGCTGTGTTCA +
Preference number: 3 (lower is better)
Translates to: RFNSVSDIPAEEISKRSFKRTCG*ATRLCS
Trigger: TGAACACAGCCTAGTTGCCAACCCACATGTCCTTTT...AAAGCTCCTCTTTGAGATCTCCTCTGCAGGAATATCAGAGACGGAGTTGAAGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
3UTR-3UTR CAA 90 bp ATTTTGGTAGCAGATGCCTACCGTGCAGACTGGTTCAGTAATGGTACTCAGCATGCATGCTTCCTCCTTTaGGCAAGCAGAACAGTCAGT +
Preference number: 3 (lower is better)
Translates to: ILVADAYRADWFSNGTQHACFLL*ASRTVS
Trigger: ACTGACTGTTCTGCTTGCCAAAAGGAGGAAGCATGC...ATGCTGAGTACCATTACTGAACCAGTCTGCACGGTAGGCATCTGCTACCAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
3UTR-3UTR CAA 90 bp ATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAATCAATAATGCCCGCAGCAGCTTaGAAGATTTGGGAGACTGAG +
Preference number: 3 (lower is better)
Translates to: ITNVTGDDLQGVRSLESIMPAAA*KIWETE
Trigger: CTCAGTCTCCCAAATCTTCAAAGCTGCTGCGGGCAT...TATTGATTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525910.1
3UTR-3UTR CAA 90 bp GAGTGGTGCAATCACCAACTTCCCATAATAGTAGCTGTCAATGACCACCACAGGACAGCAATGGAAGTCTaGTCCATATACCATCCAGTC +
Preference number: 3 (lower is better)
Translates to: EWCNHQLPIIVAVNDHHRTAMEV*SIYHPV
Trigger: GACTGGATGGTATATGGACAAGACTTCCATTGCTGT...CCTGTGGTGGTCATTGACAGCTACTATTATGGGAAGTTGGTGATTGCACCACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613181.4
ENST00000619129.4
3UTR TCA 72 bp GAAGGAATGCTGATGATGAGCAAAACATGCCAGTGCTaGGAACCAAGAAGGCTAGCATCATTCGACTCACGT +
Preference number: 3 (lower is better)
Translates to: EGMLMMSKTCQC*EPRRLASFDSR
Trigger: ACGTGAGTCGAATGATGCTAGCCTTCTTGGTTCTCAGCACTGGCATGTTTTGCTCATCATCAGCATTCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612489.1
ENST00000619129.4
3UTR CCA 72 bp TATGGAGAAATAAGTATCTTGCATGCTTCCTCCTTTTaGCAAGCAGAACAGTCAGTGCAGGCTGAACACTGC +
Preference number: 3 (lower is better)
Translates to: YGEISILHASSF*QAEQSVQAEHC
Trigger: GCAGTGTTCAGCCTGCACTGACTGTTCTGCTTGCCAAAAGGAGGAAGCATGCAAGATACTTATTTCTCCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
3UTR CCA 72 bp ATTCACAGGTCTGCCTTCTGGGACAGTGTGGATGGTTaGGTCTGTAGCAATTCGGTAAAATTCTGGATACAA +
Preference number: 3 (lower is better)
Translates to: IHRSAFWDSVDG*VCSNSVKFWIQ
Trigger: TTGTATCCAGAATTTTACCGAATTGCTACAGACCCAACCATCCACACTGTCCCAGAAGGCAGACCTGTGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619129.4
3UTR CCA 72 bp GATGTGCAGGTTTGTTACATAGGTAAACTTGAGCCATaGTGGTTTGCTGCACAGATCAACCCATCACCTAGA +
Preference number: 3 (lower is better)
Translates to: DVQVCYIGKLEP*WFAAQINPSPR
Trigger: TCTAGGTGATGGGTTGATCTGTGCAGCAAACCACCATGGCTCAAGTTTACCTATGTAACAAACCTGCACATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618252.1
3UTR TCA 72 bp TTTTTGAGGGAGAACTGCTACTCTGAGCAGGTGTGTTaGAACTGTTTTTCCCAGGCAAAGCTATCCTTCCTA +
Preference number: 3 (lower is better)
Translates to: FLRENCYSEQVC*NCFSQAKLSFL
Trigger: TAGGAAGGATAGCTTTGCCTGGGAAAAACAGTTTCAACACACCTGCTCAGAGTAGCAGTTCTCCCTCAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
3UTR CCA 72 bp TCACTGGAATCAATAGTTAACAAGATGGTTGTCCTTTaGGGCCACAGGTGTGTTGCTAACCTCCACTTTTCT +
Preference number: 3 (lower is better)
Translates to: SLESIVNKMVVL*GHRCVANLHFS
Trigger: AGAAAAGTGGAGGTTAGCAACACACCTGTGGCCCCAAAGGACAACCATCTTGTTAACTATTGATTCCAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000524671.1
ENST00000525910.1
ENST00000619129.4
3UTR-3UTR CAA 90 bp ACTGCTACTCTGAGCAGGTGTGTTGAAACTGTTTTTCCCAGGCAAAGCTATCCTGTAATGTTTTCATGGTaGAGTGAGGAATATGGAGGA +
Preference number: 3 (lower is better)
Translates to: TATLSRCVETVFPRQSYPVMFSW*SEEYGG
Trigger: TCCTCCATATTCCTCACTCAACCATGAAAACATTAC...AGGATAGCTTTGCCTGGGAAAAACAGTTTCAACACACCTGCTCAGAGTAGCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
3UTR-3UTR CAA 90 bp TACAGATACACCAGAAAGCCTCTGAAATCCAACGATGCCATACGGAAGTCTGATAGAATGCCCTTCTCTTaGAAAATGAAAGATGGGGCT +
Preference number: 3 (lower is better)
Translates to: YRYTRKPLKSNDAIRKSDRMPFS*KMKDGA
Trigger: AGCCCCATCTTTCATTTTCAAAGAGAAGGGCATTCT...ATCAGACTTCCGTATGGCATCGTTGGATTTCAGAGGCTTTCTGGTGTATCTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
3UTR-3UTR CAA 90 bp TCAGAGAACCATGCATTTGCCAAGTATACCTACTCCCTCACTCACCCCATGATCAGTCCTGGCCTTTCTTaGCGCTATATTATAATTAAG +
Preference number: 3 (lower is better)
Translates to: SENHAFAKYTYSLTHPMISPGLS*RYIIIK
Trigger: CTTAATTATAATATAGCGCAAAGAAAGGCCAGGACT...GATCATGGGGTGAGTGAGGGAGTAGGTATACTTGGCAAATGCATGGTTCTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
3UTR-3UTR CAA 90 bp TTCATTTCTATATTCCTTACCTATAACATTTGGCACAGCGTTCTGCCATGTATTTGGCCTAAGAGAGGCTaGCTAGTTCTCAGATGCCAG +
Preference number: 3 (lower is better)
Translates to: FISIFLTYNIWHSVLPCIWPKRG*LVLRCQ
Trigger: CTGGCATCTGAGAACTAGCAAGCCTCTCTTAGGCCA...AATACATGGCAGAACGCTGTGCCAAATGTTATAGGTAAGGAATATAGAAATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
3UTR-3UTR CAA 90 bp TCATTTCTATATTCCTTACCTATAACATTTGGCACAGCGTTCTGCCATGTATTGGCATGCTTCCTCCTTTaGGCAAGCAGAACAGTCAGT +
Preference number: 3 (lower is better)
Translates to: SFLYSLPITFGTAFCHVLACFLL*ASRTVS
Trigger: ACTGACTGTTCTGCTTGCCAAAAGGAGGAAGCATGC...CAATACATGGCAGAACGCTGTGCCAAATGTTATAGGTAAGGAATATAGAAATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
3UTR-3UTR CAA 90 bp TGTGTTCTCATCGTTCAGCTCCCATTTATAAGTGAGAAGATGTGGTGTTTGGTTTGCTCCTGTGTTAGTTaGCTGAGGATAATGGCTTTC +
Preference number: 3 (lower is better)
Translates to: CVLIVQLPFISEKMWCLVCSCVS*LRIMAF
Trigger: GAAAGCCATTATCCTCAGCAAACTAACACAGGAGCA...AACCAAACACCACATCTTCTCACTTATAAATGGGAGCTGAACGATGAGAACACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618252.1
3UTR TCA 72 bp ATGTCAGAAGACCTTTATTACAAATGTTACAGGCGATaGCTTGCAGGGAGTCAGGTCACTGGAATCAATAGT +
Preference number: 3 (lower is better)
Translates to: MSEDLYYKCYRR*LAGSQVTGINS
Trigger: ACTATTGATTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTTCTGACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000398006.6
ENST00000524671.1
ENST00000525910.1
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
3UTR TCA 72 bp TTAACACTTTACTGCTTCCTGATTTCATTTGCAGCATaGATCACCTGGTTATACAGACTGGCAGAAGGCAAC +
Preference number: 3 (lower is better)
Translates to: LTLYCFLISFAA*ITWLYRLAEGN
Trigger: GTTGCCTTCTGCCAGTCTGTATAACCAGGTGATTCATGCTGCAAATGAAATCAGGAAGCAGTAAAGTGTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
3UTR GCA 72 bp GAGCAATATATCTATCTGTGCTTTAGGGCCTTTCTCTaGCTAGCTGCAAAAAGTTTACATGCAGAACAGAGA +
Preference number: 3 (lower is better)
Translates to: EQYIYLCFRAFL*LAAKSLHAEQR
Trigger: TCTCTGTTCTGCATGTAAACTTTTTGCAGCTAGGCAGAGAAAGGCCCTAAAGCACAGATAGATATATTGCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616540.5
3UTR GCA 72 bp TCTTGCTTTAACACTTTACTGCTTCCTGATTTCATTTaGAGCATGAATCACCTGGTTATACAGACTGGCAGA +
Preference number: 3 (lower is better)
Translates to: SCFNTLLLPDFI*SMNHLVIQTGR
Trigger: TCTGCCAGTCTGTATAACCAGGTGATTCATGCTGCAAATGAAATCAGGAAGCAGTAAAGTGTTAAAGCAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
3UTR CCA 72 bp ATGAGGAGTAAAGACATTATACAAAACAATGTTGAGTaGTGCAATCACCAACTTCCCATAATAGTAGCTGTC +
Preference number: 3 (lower is better)
Translates to: MRSKDIIQNNVE*CNHQLPIIVAV
Trigger: GACAGCTACTATTATGGGAAGTTGGTGATTGCACCACTCAACATTGTTTTGTATAATGTCTTTACTCCTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613181.4
ENST00000618252.1
ENST00000619129.4
3UTR-3UTR CAA 90 bp TTCATTTCTATATTCCTTACCTATAACATTTGGCACAGCGTTCTGCCATGTATTGTAATGTTTTCATGGTaGAGTGAGGAATATGGAGGA +
Preference number: 3 (lower is better)
Translates to: FISIFLTYNIWHSVLPCIVMFSW*SEEYGG
Trigger: TCCTCCATATTCCTCACTCAACCATGAAAACATTAC...AATACATGGCAGAACGCTGTGCCAAATGTTATAGGTAAGGAATATAGAAATGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
3UTR TCA 72 bp GTGCTAGTTTTACACTGGAAAATAGTAATCAAGAATTaGGAATTAAATGCCAGAGATCTTTCAAGCAAGGGG +
Preference number: 3 (lower is better)
Translates to: VLVLHWKIVIKN*ELNARDLSSKG
Trigger: CCCCTTGCTTGAAAGATCTCTGGCATTTAATTCTCAATTCTTGATTACTATTTTCCAGTGTAAAACTAGCAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
3UTR GCA 72 bp AGGAGTAAAGACATTATACAAAACAATGTTGAGTGGTaGAATCACCAACTTCCCATAATAGTAGCTGTCAAT +
Preference number: 3 (lower is better)
Translates to: RSKDIIQNNVEW*NHQLPIIVAVN
Trigger: ATTGACAGCTACTATTATGGGAAGTTGGTGATTGCACCACTCAACATTGTTTTGTATAATGTCTTTACTCCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613181.4
ENST00000618252.1
ENST00000619129.4
3UTR CCA 72 bp AAAACATTCATTTCTATATTCCTTACCTATAACATTTaGCACAGCGTTCTGCCATGTATTGTGCTCTCACTA +
Preference number: 3 (lower is better)
Translates to: KTFISIFLTYNI*HSVLPCIVLSL
Trigger: TAGTGAGAGCACAATACATGGCAGAACGCTGTGCCAAATGTTATAGGTAAGGAATATAGAAATGAATGTTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR GCA 90 bp GATAGCCCCAGCTGCTACTCCCAGCACAGCAATGGAAGTCTTGTCCATATACCACGCCCGCCTCTCGGCTaGCCAGCAGCTCCCGCAGCT +
Preference number: 4 (lower is better)
Translates to: DSPSCYSQHSNGSLVHIPRPPLG*PAAPAA
Trigger: AGCTGCGGGAGCTGCTGGGCAGCCGAGAGGCGGGCG...TGGTATATGGACAAGACTTCCATTGCTGTGCTGGGAGTAGCAGCTGGGGCTATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612489.1
ENST00000613181.4
ENST00000619129.4
CDS-3UTR GCA 90 bp CGTACACTGTATACTGATCTGACAGGAAGGGGACATAGAATGCCCGCAGCAGCTGTGTGTTCGGTCCGGTaGTCCGCGCCGCCCGCCTCT +
Preference number: 4 (lower is better)
Translates to: RTLYTDLTGRGHRMPAAAVCSVR*SAPPAS
Trigger: AGAGGCGGGCGGCGCGGAGCACCGGACCGAACACAC...AGCTGCTGCGGGCATTCTATGTCCCCTTCCTGTCAGATCAGTATACAGTGTACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619129.4
CDS-3UTR GCA 90 bp CTCCCAGCACAGCAATGGAAGTCTTGTCCATATACCATCCAGTCATGGCTATCACGCCCGCCTCTCGGCTaGCCAGCAGCTCCCGCAGCT +
Preference number: 4 (lower is better)
Translates to: LPAQQWKSCPYTIQSWLSRPPLG*PAAPAA
Trigger: AGCTGCGGGAGCTGCTGGGCAGCCGAGAGGCGGGCG...TGATAGCCATGACTGGATGGTATATGGACAAGACTTCCATTGCTGTGCTGGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612489.1
ENST00000613181.4
ENST00000619129.4
CDS-3UTR GCA 90 bp GGGGCCACAGGTGTGTTGCTAACCTCCACTTTTCTTCCTGATTTGCTTTGCTTTCGCCCGCCTCTCGGCTaGCCAGCAGCTCCCGCAGCT +
Preference number: 4 (lower is better)
Translates to: GATGVLLTSTFLPDLLCFRPPLG*PAAPAA
Trigger: AGCTGCGGGAGCTGCTGGGCAGCCGAGAGGCGGGCG...AAAGCAAAGCAAATCAGGAAGAAAAGTGGAGGTTAGCAACACACCTGTGGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619129.4
CDS-3UTR GCA 90 bp TGCTACTCCCAGCACAGCAATGGAAGTCTTGTCCATATACCATCCAGTCATGGCCTGCCCTTCAGGCGCTaGCGAGCCCCTCGACTAGCC +
Preference number: 4 (lower is better)
Translates to: CYSQHSNGSLVHIPSSHGLPFRR*RAPRLA
Trigger: GGCTAGTCGAGGGGCTCGGCAGCGCCTGAAGGGCAG...GCCATGACTGGATGGTATATGGACAAGACTTCCATTGCTGTGCTGGGAGTAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612489.1
ENST00000613181.4
ENST00000619129.4
CDS-3UTR GCA 90 bp GCTGCTACTCCCAGCACAGCAATGGAAGTCTTGTCCATATACCATCCAGTCATGCTGCCCTTCAGGCGCTaGCGAGCCCCTCGACTAGCC +
Preference number: 4 (lower is better)
Translates to: AATPSTAMEVLSIYHPVMLPFRR*RAPRLA
Trigger: GGCTAGTCGAGGGGCTCGGCAGCGCCTGAAGGGCAG...CATGACTGGATGGTATATGGACAAGACTTCCATTGCTGTGCTGGGAGTAGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612489.1
ENST00000613181.4
ENST00000619129.4
CDS-3UTR GCA 90 bp GAACCAAGAAGGCTAGCATCATTCGACTCACGTGCAACCCAAACTTCTTGCACACACTGCTGGCCCCGCTaGCCTTCAGGCGCTGCCGAG +
Preference number: 4 (lower is better)
Translates to: EPRRLASFDSRATQTSCTHCWPR*PSGAAE
Trigger: CTCGGCAGCGCCTGAAGGGCAGCGGGGCCAGCAGTG...TGTGCAAGAAGTTTGGGTTGCACGTGAGTCGAATGATGCTAGCCTTCTTGGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612489.1
ENST00000619129.4
CDS-3UTR GCA 90 bp GAGCAAAACATGCCAGTGCTGAGAACCAAGAAGGCTAGCATCATTCGACTCACGGGGCCGTATCCCCACTaGTGGCCCCGCTGCCCTTCA +
Preference number: 4 (lower is better)
Translates to: EQNMPVLRTKKASIIRLTGPYPH*WPRCPS
Trigger: TGAAGGGCAGCGGGGCCAGCAGTGGGGATACGGCCC...CGTGAGTCGAATGATGCTAGCCTTCTTGGTTCTCAGCACTGGCATGTTTTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000612489.1
ENST00000619129.4
CDS-3UTR CCA 90 bp GAGCAAAACATGCCAGTGCTGAGAACCAAGAAGGCTAGCATCATTCGACTCACGCCGTATCCCCACTGCTaGCCCCGCTGCCCTTCAGGC +
Preference number: 4 (lower is better)
Translates to: EQNMPVLRTKKASIIRLTPYPHC*PRCPSG
Trigger: GCCTGAAGGGCAGCGGGGCCAGCAGTGGGGATACGG...CGTGAGTCGAATGATGCTAGCCTTCTTGGTTCTCAGCACTGGCATGTTTTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000612489.1
ENST00000619129.4
CDS-3UTR CCA 90 bp ATCTTTCAAGCAAGGGGGAGCCCAGTCTATCCTCACACACTCCCCAGTTATTGTCCGTATCCCCACTGCTaGCCCCGCTGCCCTTCAGGC +
Preference number: 4 (lower is better)
Translates to: IFQARGSPVYPHTLPSYCPYPHC*PRCPSG
Trigger: GCCTGAAGGGCAGCGGGGCCAGCAGTGGGGATACGG...ACAATAACTGGGGAGTGTGTGAGGATAGACTGGGCTCCCCCTTGCTTGAAAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000616540.5
CDS-3UTR TCA 90 bp ATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAATCAATAGAGGCCAGGCCGGACTaGGCCCCGCGCGCCACAGCT +
Preference number: 4 (lower is better)
Translates to: ITNVTGDDLQGVRSLESIEARPD*APRATA
Trigger: AGCTGTGGCGCGCGGGGCTCAGTCCGGCCTGGCCTC...TATTGATTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398006.6
CDS-3UTR TCA 90 bp TTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAATCAATCGGGCCTCCCGCGGTaGGGCCAGGCCGGACTGAGC +
Preference number: 4 (lower is better)
Translates to: LLQMLQAMTCRESGHWNQSGLPR*GQAGLS
Trigger: GCTCAGTCCGGCCTGGCCTCACCGCGGGAGGCCCGA...TTGATTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398006.6
CDS-3UTR GCA 90 bp GTCTTGCTGGAGGTGAAAAGGACATGTGGGTTGGCAACTAGGCTGTGTTCATTTCTGCCCTTCAGGCGCTaGCGAGCCCCTCGACTAGCC +
Preference number: 4 (lower is better)
Translates to: VLLEVKRTCGLATRLCSFLPFRR*RAPRLA
Trigger: GGCTAGTCGAGGGGCTCGGCAGCGCCTGAAGGGCAG...AAATGAACACAGCCTAGTTGCCAACCCACATGTCCTTTTCACCTCCAGCAAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616540.5
CDS-3UTR GCA 90 bp CCAGCACAGCAATGGAAGTCTTGTCCATATACCATCCAGTCATGGCTATCAACGGGGCCGTATCCCCACTaGTGGCCCCGCTGCCCTTCA +
Preference number: 4 (lower is better)
Translates to: PAQQWKSCPYTIQSWLSTGPYPH*WPRCPS
Trigger: TGAAGGGCAGCGGGGCCAGCAGTGGGGATACGGCCC...CGTTGATAGCCATGACTGGATGGTATATGGACAAGACTTCCATTGCTGTGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000612489.1
ENST00000613181.4
ENST00000619129.4
CDS-3UTR GCA 90 bp ACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAACGCCCGCCTCTCGGCTaGCCAGCAGCTCCCGCAGCT +
Preference number: 4 (lower is better)
Translates to: TFITNVTGDDLQGVRSLERPPLG*PAAPAA
Trigger: AGCTGCGGGAGCTGCTGGGCAGCCGAGAGGCGGGCG...TTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR GCA 90 bp AATCACCAACTTCCCATAATAGTAGCTGTCAATGACCACCACAGGCACCAGAAACGCCCGCCTCTCGGCTaGCCAGCAGCTCCCGCAGCT +
Preference number: 4 (lower is better)
Translates to: NHQLPIIVAVNDHHRHQKRPPLG*PAAPAA
Trigger: AGCTGCGGGAGCTGCTGGGCAGCCGAGAGGCGGGCG...TTTCTGGTGCCTGTGGTGGTCATTGACAGCTACTATTATGGGAAGTTGGTGATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613181.4
ENST00000618252.1
ENST00000619129.4
CDS-3UTR CCA 90 bp CTCCCAGCACAGCAATGGAAGTCTTGTCCATATACCATCCAGTCATGGCTATCACCGTATCCCCACTGCTaGCCCCGCTGCCCTTCAGGC +
Preference number: 4 (lower is better)
Translates to: LPAQQWKSCPYTIQSWLSPYPHC*PRCPSG
Trigger: GCCTGAAGGGCAGCGGGGCCAGCAGTGGGGATACGG...TGATAGCCATGACTGGATGGTATATGGACAAGACTTCCATTGCTGTGCTGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612489.1
ENST00000613181.4
ENST00000619129.4
CDS-3UTR TCA 90 bp AAGCCCATATGGCCTAAGAGAGGCTTGCTAGTTCTCAGATGCCAGGCCAGAGTGGCCCGTGATATCCTCTaGACAGTGCCACAGAGCGAG +
Preference number: 4 (lower is better)
Translates to: KPIWPKRGLLVLRCQARVARDIL*TVPQSE
Trigger: CTCGCTCTGTGGCACTGTTCAGAGGATATCACGGGC...CACTCTGGCCTGGCATCTGAGAACTAGCAAGCCTCTCTTAGGCCATATGGGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR GCA 90 bp GTCAGGCTGCATCACACAGCACTGCTGTGCTGGTCTAACACACAGGCAGACTGGGAAGCACTACTTTCCTaGCACAGGTCAGGCTGCATC +
Preference number: 4 (lower is better)
Translates to: VRLHHTALLCWSNTQADWEALLS*HRSGCI
Trigger: GATGCAGCCTGACCTGTGGCAGGAAAGTAGTGCTTC...CCAGTCTGCCTGTGTGTTAGACCAGCACAGCAGTGCTGTGTGATGCAGCCTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR GCA 90 bp TATTCCATAAGAGAAGTCAGTGGTAGGACTAGGAGAGCCAAAGCAAAGGCTACACACTGCTGGCCCCGCTaGCCTTCAGGCGCTGCCGAG +
Preference number: 4 (lower is better)
Translates to: YSIREVSGRTRRAKAKATHCWPR*PSGAAE
Trigger: CTCGGCAGCGCCTGAAGGGCAGCGGGGCCAGCAGTG...TGTAGCCTTTGCTTTGGCTCTCCTAGTCCTACCACTGACTTCTCTTATGGAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613181.4
ENST00000619129.4
CDS-3UTR GCA 90 bp AATCACCAACTTCCCATAATAGTAGCTGTCAATGACCACCACAGGCACCAGAAACACTGCTGGCCCCGCTaGCCTTCAGGCGCTGCCGAG +
Preference number: 4 (lower is better)
Translates to: NHQLPIIVAVNDHHRHQKHCWPR*PSGAAE
Trigger: CTCGGCAGCGCCTGAAGGGCAGCGGGGCCAGCAGTG...TTTCTGGTGCCTGTGGTGGTCATTGACAGCTACTATTATGGGAAGTTGGTGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613181.4
ENST00000618252.1
ENST00000619129.4
CDS-3UTR GCA 90 bp GCAATGGAAGTCTTGTCCATATACCATCCAGTCATGGCTATCAACGTAGTGTACCACTGCTGGCCCCGCTaGCCTTCAGGCGCTGCCGAG +
Preference number: 4 (lower is better)
Translates to: AMEVLSIYHPVMAINVVYHCWPR*PSGAAE
Trigger: CTCGGCAGCGCCTGAAGGGCAGCGGGGCCAGCAGTG...GTACACTACGTTGATAGCCATGACTGGATGGTATATGGACAAGACTTCCATTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612489.1
ENST00000613181.4
ENST00000619129.4
CDS-3UTR GCA 90 bp GTCAGGCTGCATCACACAGCACTGCTGTGCTGGTCTAACACACAGGCAGACTGGCAAAAATTAGCTGAGTaGGGTGGTGGTGTGTGCCTG +
Preference number: 4 (lower is better)
Translates to: VRLHHTALLCWSNTQADWQKLAE*GGGVCL
Trigger: CAGGCACACACCACCACCGCACTCAGCTAATTTTTG...CCAGTCTGCCTGTGTGTTAGACCAGCACAGCAGTGCTGTGTGATGCAGCCTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR GCA 90 bp AATCACCAACTTCCCATAATAGTAGCTGTCAATGACCACCACAGGCACCAGAAACTGCCCTTCAGGCGCTaGCGAGCCCCTCGACTAGCC +
Preference number: 4 (lower is better)
Translates to: NHQLPIIVAVNDHHRHQKLPFRR*RAPRLA
Trigger: GGCTAGTCGAGGGGCTCGGCAGCGCCTGAAGGGCAG...TTTCTGGTGCCTGTGGTGGTCATTGACAGCTACTATTATGGGAAGTTGGTGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613181.4
ENST00000618252.1
ENST00000619129.4
CDS-3UTR GCA 90 bp TCGATGTCACAGTATAGTGCTCCAGGCGATATCGTTGAAACACAAAGTGGTAACCTGCCCTTCAGGCGCTaGCGAGCCCCTCGACTAGCC +
Preference number: 4 (lower is better)
Translates to: SMSQYSAPGDIVETQSGNLPFRR*RAPRLA
Trigger: GGCTAGTCGAGGGGCTCGGCAGCGCCTGAAGGGCAG...GTTACCACTTTGTGTTTCAACGATATCGCCTGGAGCACTATACTGTGACATCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613181.4
ENST00000619129.4
CDS-3UTR GCA 90 bp TTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAATCAACACTGCTGGCCCCGCTaGCCTTCAGGCGCTGCCGAG +
Preference number: 4 (lower is better)
Translates to: LLQMLQAMTCRESGHWNQHCWPR*PSGAAE
Trigger: CTCGGCAGCGCCTGAAGGGCAGCGGGGCCAGCAGTG...TTGATTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR GCA 90 bp TCACTGGAATCAATAGTTAACAAGATGGTTGTCCTTTGGGGCCACAGGTGTGTTGGGCCGTATCCCCACTaGTGGCCCCGCTGCCCTTCA +
Preference number: 4 (lower is better)
Translates to: SLESIVNKMVVLWGHRCVGPYPH*WPRCPS
Trigger: TGAAGGGCAGCGGGGCCAGCAGTGGGGATACGGCCC...AACACACCTGTGGCCCCAAAGGACAACCATCTTGTTAACTATTGATTCCAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR GCA 90 bp GTAAACTTGAGCCATGGTGGTTTGCTGCACAGATCAACCCATCACCTAGATATTGGGCCGTATCCCCACTaGTGGCCCCGCTGCCCTTCA +
Preference number: 4 (lower is better)
Translates to: VNLSHGGLLHRSTHHLDIGPYPH*WPRCPS
Trigger: TGAAGGGCAGCGGGGCCAGCAGTGGGGATACGGCCC...AATATCTAGGTGATGGGTTGATCTGTGCAGCAAACCACCATGGCTCAAGTTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618252.1
CDS-3UTR CCA 90 bp GTCAGGCTGCATCACACAGCACTGCTGTGCTGGTCTAACACACAGGCAGACTGGGCCTACCGTGCAGACTaGTTCAGTAATGGTACTCAG +
Preference number: 4 (lower is better)
Translates to: VRLHHTALLCWSNTQADWAYRAD*FSNGTQ
Trigger: CTGAGTACCATTACTGAACCAGTCTGCACGGTAGGC...CCAGTCTGCCTGTGTGTTAGACCAGCACAGCAGTGCTGTGTGATGCAGCCTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR CCA 90 bp AGCCCCAGCTGCTACTCCCAGCACAGCAATGGAAGTCTTGTCCATATACCATCCAGACATAGCTTTGGCTaGCAAACGGTGTCCGCCGAG +
Preference number: 4 (lower is better)
Translates to: SPSCYSQHSNGSLVHIPSRHSFG*QTVSAE
Trigger: CTCGGCGGACACCGTTTGCCAGCCAAAGCTATGTCT...GGATGGTATATGGACAAGACTTCCATTGCTGTGCTGGGAGTAGCAGCTGGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612489.1
CDS-3UTR CCA 90 bp AATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAATCAATAGTTAACCCGTATCCCCACTGCTaGCCCCGCTGCCCTTCAGGC +
Preference number: 4 (lower is better)
Translates to: NVTGDDLQGVRSLESIVNPYPHC*PRCPSG
Trigger: GCCTGAAGGGCAGCGGGGCCAGCAGTGGGGATACGG...GTTAACTATTGATTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
3UTR CAA 72 bp GCTTTGGTGGAGAAGCCCATATGGCCTAAGAGAGGCTaGCTAGTTCTCAGATGCCAGGCCAGAGTGTGGAGA +
Preference number: 4 (lower is better)
Translates to: ALVEKPIWPKRG*LVLRCQARVWR
Trigger: TCTCCACACTCTGGCCTGGCATCTGAGAACTAGCAAGCCTCTCTTAGGCCATATGGGCTTCTCCACCAAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR TCA 90 bp AGAGGTTGCAGTGAGCTGAGGTCGTGCCATTGTGTTCCAACCTGGGCGACAGAGCACAGAGCGAGAAAATaGCAAGAGCCCAAACAGGAA +
Preference number: 4 (lower is better)
Translates to: RGCSELRSCHCVPTWATEHRARK*QEPKQE
Trigger: TTCCTGTTTGGGCTCTTGTCATTTTCTCGCTCTGTG...CTCTGTCGCCCAGGTTGGAACACAATGGCACGACCTCAGCTCACTGCAACCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR TCA 90 bp GTCAGGCTGCATCACACAGCACTGCTGTGCTGGTCTAACACACAGGCAGACTGGCTTCAACTCCGTCTCTaGTATTCCTGCAGAGGAGAT +
Preference number: 4 (lower is better)
Translates to: VRLHHTALLCWSNTQADWLQLRL*YSCRGD
Trigger: ATCTCCTCTGCAGGAATATCAGAGACGGAGTTGAAG...CCAGTCTGCCTGTGTGTTAGACCAGCACAGCAGTGCTGTGTGATGCAGCCTGAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR GCA 90 bp GTCTTGCTGGAGGTGAAAAGGACATGTGGGTTGGCAACTAGGCTGTGTTCATTTCCGGGAGACAGAGGTTaGAGTGAGCTGAGGTCGTGC +
Preference number: 4 (lower is better)
Translates to: VLLEVKRTCGLATRLCSFPGDRG*SELRSC
Trigger: GCACGACCTCAGCTCACTGCAACCTCTGTCTCCCGG...AAATGAACACAGCCTAGTTGCCAACCCACATGTCCTTTTCACCTCCAGCAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR GCA 90 bp TCATGTCAGAAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCCTGCCCTTCAGGCGCTaGCGAGCCCCTCGACTAGCC +
Preference number: 4 (lower is better)
Translates to: SCQKTFITNVTGDDLQGVLPFRR*RAPRLA
Trigger: GGCTAGTCGAGGGGCTCGGCAGCGCCTGAAGGGCAG...GACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTTCTGACATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR CCA 90 bp GTCAGGCTGCATCACACAGCACTGCTGTGCTGGTCTAACACACAGGCAGACTGGCATGCTTCCTCCTTTTaGCAAGCAGAACAGTCAGTG +
Preference number: 4 (lower is better)
Translates to: VRLHHTALLCWSNTQADWHASSF*QAEQSV
Trigger: CACTGACTGTTCTGCTTGCCAAAAGGAGGAAGCATG...CCAGTCTGCCTGTGTGTTAGACCAGCACAGCAGTGCTGTGTGATGCAGCCTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR CCA 90 bp CTTGTCCATATACCATCCAGTCATGGCTATCAACGTAGTGTACATACAGAAGCTCCGTATCCCCACTGCTaGCCCCGCTGCCCTTCAGGC +
Preference number: 4 (lower is better)
Translates to: LVHIPSSHGYQRSVHTEAPYPHC*PRCPSG
Trigger: GCCTGAAGGGCAGCGGGGCCAGCAGTGGGGATACGG...AGCTTCTGTATGTACACTACGTTGATAGCCATGACTGGATGGTATATGGACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612489.1
ENST00000613181.4
ENST00000619129.4
3UTR CAA 72 bp CTGACAGGAAGGGGACATAGAATGCCCGCAGCAGCTTaGAAGATTTGGGAGACTGAGATGGGAGGATGGCTT +
Preference number: 4 (lower is better)
Translates to: LTGRGHRMPAAA*KIWETEMGGWL
Trigger: AAGCCATCCTCCCATCTCAGTCTCCCAAATCTTCAAAGCTGCTGCGGGCATTCTATGTCCCCTTCCTGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525910.1
3UTR CAA 72 bp CTGACAGGAAGGGGACATAGAATGCCCGCAGCAGCTTaGAAGATCCCAGTCAAGGAGAAGTTAATGGCCAGG +
Preference number: 4 (lower is better)
Translates to: LTGRGHRMPAAA*KIPVKEKLMAR
Trigger: CCTGGCCATTAACTTCTCCTTGACTGGGATCTTCAAAGCTGCTGCGGGCATTCTATGTCCCCTTCCTGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619129.4
CDS-3UTR TCA 90 bp AGAGCTGCACTGAATGGCCAGCCTAAGATAGCCCCAGCTGCTACTCCCAGCACATCCACCTGTGTTTCATaGCCAGCAAATCAAAGGCAA +
Preference number: 4 (lower is better)
Translates to: RAALNGQPKIAPAATPSTSTCVS*PANQRQ
Trigger: TTGCCTTTGATTTGCTGGTCATGAAACACAGGTGGA...TGTGCTGGGAGTAGCAGCTGGGGCTATCTTAGGCTGGCCATTCAGTGCAGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613181.4
ENST00000619129.4
CDS-3UTR TCA 90 bp GCCCCAGCTGCTACTCCCAGCACAGCAATGGAAGTCTTGTCCATATACCATCCAGCCATCAGCGACCAATaGAAGAAACTCTTCCACCTG +
Preference number: 4 (lower is better)
Translates to: APAATPSTAMEVLSIYHPAISDQ*KKLFHL
Trigger: CAGGTGGAAGAGTTTCTTTCATTGGTCGCTGATGGC...TGGATGGTATATGGACAAGACTTCCATTGCTGTGCTGGGAGTAGCAGCTGGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613181.4
ENST00000619129.4
CDS-3UTR TCA 90 bp CAGGGAGTCAGGTCACTGGAATCAATAGTTAACAAGATGGTTGTCCTTTGGGGCGCCCGTGATATCCTCTaGACAGTGCCACAGAGCGAG +
Preference number: 4 (lower is better)
Translates to: QGVRSLESIVNKMVVLWGARDIL*TVPQSE
Trigger: CTCGCTCTGTGGCACTGTTCAGAGGATATCACGGGC...GCCCCAAAGGACAACCATCTTGTTAACTATTGATTCCAGTGACCTGACTCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR TCA 90 bp GCTTTGGTGGAGAAGCCCATATGGCCTAAGAGAGGCTTGCTAGTTCTCAGATGCAAATCAAGGGGCCCGTaGTATCCTCTGAACAGTGCC +
Preference number: 4 (lower is better)
Translates to: ALVEKPIWPKRGLLVLRCKSRGP*YPLNSA
Trigger: GGCACTGTTCAGAGGATATCACGGGCCCCTTGATTT...GCATCTGAGAACTAGCAAGCCTCTCTTAGGCCATATGGGCTTCTCCACCAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR TCA 90 bp CCCAGCTGCTACTCCCAGCACAGCAATGGAAGTCTTGTCCATATACCATCCAGTAAATCAAGGGGCCCGTaGTATCCTCTGAACAGTGCC +
Preference number: 4 (lower is better)
Translates to: PSCYSQHSNGSLVHIPSSKSRGP*YPLNSA
Trigger: GGCACTGTTCAGAGGATATCACGGGCCCCTTGATTT...ACTGGATGGTATATGGACAAGACTTCCATTGCTGTGCTGGGAGTAGCAGCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613181.4
ENST00000619129.4
CDS-3UTR TCA 90 bp CCCAGCTGCTACTCCCAGCACAGCAATGGAAGTCTTGTCCATATACCATCCAGTACCCTTCCCCATAGATaGGGTAGTGTGTCTACTGGC +
Preference number: 4 (lower is better)
Translates to: PSCYSQHSNGSLVHIPSSTLPHR*GSVSTG
Trigger: GCCAGTAGACACACTACCTCATCTATGGGGAAGGGT...ACTGGATGGTATATGGACAAGACTTCCATTGCTGTGCTGGGAGTAGCAGCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612489.1
CDS-3UTR TCA 90 bp GTCAGGCTGCATCACACAGCACTGCTGTGCTGGTCTAACACACAGGCAGACTGGAGGGTCCTAGTCCTGTaGAGTGCTTTAAAGAAGCTT +
Preference number: 4 (lower is better)
Translates to: VRLHHTALLCWSNTQADWRVLVL*SALKKL
Trigger: AAGCTTCTTTAAAGCACTTCACAGGACTAGGACCCT...CCAGTCTGCCTGTGTGTTAGACCAGCACAGCAGTGCTGTGTGATGCAGCCTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR TCA 90 bp GTCAGGCTGCATCACACAGCACTGCTGTGCTGGTCTAACACACAGGCAGACTGGGGCTGCAAAAGAACATaGCTTCCAAACAGAAGCACT +
Preference number: 4 (lower is better)
Translates to: VRLHHTALLCWSNTQADWGCKRT*LPNRST
Trigger: AGTGCTTCTGTTTGGAAGTCATGTTCTTTTGCAGCC...CCAGTCTGCCTGTGTGTTAGACCAGCACAGCAGTGCTGTGTGATGCAGCCTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR TCA 90 bp CCACATGTTGTGACTGTGAGGATCAAACGAGATGCTGTGAAAGTGCCTTGTAAAGGCGGGTGGATGACCTaGGGTCAGGAGTCCAAGACC +
Preference number: 4 (lower is better)
Translates to: PHVVTVRIKRDAVKVPCKGGWMT*GQESKT
Trigger: GGTCTTGGACTCCTGACCTCAGGTCATCCACCCGCC...TTTACAAGGCACTTTCACAGCATCTCGTTTGATCCTCACAGTCACAACATGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR GCA 90 bp AGAGGTTGCAGTGAGCTGAGGTCGTGCCATTGTGTTCCAACCTGGGCGACAGAGCTTCCTGATTTGCTTTaGTTTCCGGGGTTTGAGGAT +
Preference number: 4 (lower is better)
Translates to: RGCSELRSCHCVPTWATELPDLL*FPGFED
Trigger: ATCCTCAAACCCCGGAAAGCAAAGCAAATCAGGAAG...CTCTGTCGCCCAGGTTGGAACACAATGGCACGACCTCAGCTCACTGCAACCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR GCA 90 bp GCTTTGGTGGAGAAGCCCATATGGCCTAAGAGAGGCTTGCTAGTTCTCAGATGCGCCCCATGCAGGATGTaGCTCACAACAGACAGAACT +
Preference number: 4 (lower is better)
Translates to: ALVEKPIWPKRGLLVLRCAPCRM*LTTDRT
Trigger: AGTTCTGTCTGTTGTGAGGCACATCCTGCATGGGGC...GCATCTGAGAACTAGCAAGCCTCTCTTAGGCCATATGGGCTTCTCCACCAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR GCA 90 bp TATTCCTGCAGAGGAGATCTCAAAGAGGAGCTTTTTAATATTGTAACTAGCCATCGCCCGCCTCTCGGCTaGCCAGCAGCTCCCGCAGCT +
Preference number: 4 (lower is better)
Translates to: YSCRGDLKEELFNIVTSHRPPLG*PAAPAA
Trigger: AGCTGCGGGAGCTGCTGGGCAGCCGAGAGGCGGGCG...ATGGCTAGTTACAATATTAAAAAGCTCCTCTTTGAGATCTCCTCTGCAGGAATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616540.5
CDS-3UTR TCA 90 bp TTGCAGGGAGTCAGGTCACTGGAATCAATAGTTAACAAGATGGTTGTCCTTTGGAAGGTGGGCGAAGACTaGATGCTGACCCGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: LQGVRSLESIVNKMVVLWKVGED*MLTRPG
Trigger: TCCTGGGCGGGTCAGCATTCAGTCTTCGCCCACCTT...CCAAAGGACAACCATCTTGTTAACTATTGATTCCAGTGACCTGACTCCCTGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398006.6
CDS-3UTR TCA 90 bp CATGTCAGAAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGGTTTGGGAAGAGGTaGTGGCGGGTTGGATGGGCC +
Preference number: 4 (lower is better)
Translates to: HVRRPLLQMLQAMTCRESGFGKR*WRVGWA
Trigger: GGCCCATCCAACCCGCCATCACCTCTTCCCAAACCC...TGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTTCTGACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398006.6
CDS-3UTR TCA 90 bp GTCAGGTCACTGGAATCAATAGTTAACAAGATGGTTGTCCTTTGGGGCCACAGGACCCTTCCCCATAGATaGGGTAGTGTGTTGGCTCCC +
Preference number: 4 (lower is better)
Translates to: VRSLESIVNKMVVLWGHRTLPHR*GSVLAP
Trigger: GGGAGCCAACACACTACCTCATCTATGGGGAAGGGT...CCTGTGGCCCCAAAGGACAACCATCTTGTTAACTATTGATTCCAGTGACCTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
CDS-3UTR TCA 90 bp AGGTCACTGGAATCAATAGTTAACAAGATGGTTGTCCTTTGGGGCCACAGGTGTGCCCGTGATATCCTCTaGACAGTGCCACAGAGCGAG +
Preference number: 4 (lower is better)
Translates to: RSLESIVNKMVVLWGHRCARDIL*TVPQSE
Trigger: CTCGCTCTGTGGCACTGTTCAGAGGATATCACGGGC...ACACCTGTGGCCCCAAAGGACAACCATCTTGTTAACTATTGATTCCAGTGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR TCA 90 bp GCTTTGGTGGAGAAGCCCATATGGCCTAAGAGAGGCTTGCTAGTTCTCAGATGCTGCCCGCAGCAGCTTTaGAGATCTAGAAGCATCAAG +
Preference number: 4 (lower is better)
Translates to: ALVEKPIWPKRGLLVLRCCPQQL*RSRSIK
Trigger: CTTGATGCTTCTAGATCTTCAAAGCTGCTGCGGGCA...GCATCTGAGAACTAGCAAGCCTCTCTTAGGCCATATGGGCTTCTCCACCAAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR TCA 90 bp GCTTTGGTGGAGAAGCCCATATGGCCTAAGAGAGGCTTGCTAGTTCTCAGATGCGGAGAACTGCTACTCTaGGCAGGTGTGTTGAAACTG +
Preference number: 4 (lower is better)
Translates to: ALVEKPIWPKRGLLVLRCGELLL*AGVLKL
Trigger: CAGTTTCAACACACCTGCTCAGAGTAGCAGTTCTCC...GCATCTGAGAACTAGCAAGCCTCTCTTAGGCCATATGGGCTTCTCCACCAAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR TCA 90 bp GTCTTGCTGGAGGTGAAAAGGACATGTGGGTTGGCAACTAGGCTGTGTTCATTTGAGGTTGCAGTGAGCTaGGGTCGTGCCATTGTGTTC +
Preference number: 4 (lower is better)
Translates to: VLLEVKRTCGLATRLCSFEVAVS*GRAIVF
Trigger: GAACACAATGGCACGACCTCAGCTCACTGCAACCTC...AAATGAACACAGCCTAGTTGCCAACCCACATGTCCTTTTCACCTCCAGCAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR GCA 90 bp ATCTTTCAAGCAAGGGGGAGCCCAGTCTATCCTCACACACTCCCCAGTTATTGTTTACAGGCGATGACTTaGAGGGAGTCAGGTCACTGG +
Preference number: 4 (lower is better)
Translates to: IFQARGSPVYPHTLPSYCLQAMT*RESGHW
Trigger: CCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAA...ACAATAACTGGGGAGTGTGTGAGGATAGACTGGGCTCCCCCTTGCTTGAAAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616540.5
CDS-3UTR GCA 90 bp AGAGGCTTGCTAGTTCTCAGATGCCAGGCCAGAGTGTGGAGAACAGCTTATCACTTGCTAGTTCTCAGATaGCAGGCCAGAGTGTGGAGA +
Preference number: 4 (lower is better)
Translates to: RGLLVLRCQARVWRTAYHLLVLR*QARVWR
Trigger: TCTCCACACTCTGGCCTGGCATCTGAGAACTAGCAA...GTGATAAGCTGTTCTCCACACTCTGGCCTGGCATCTGAGAACTAGCAAGCCTCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR GCA 90 bp CGCTTCAACTCCGTCTCTGATATTCCTGCAGAGGAGATCTCAAAGAGGAGCTTTTGCCACAGGTCAGGCTaGATCACACAGCACTGCTGT +
Preference number: 4 (lower is better)
Translates to: RFNSVSDIPAEEISKRSFCHRSG*ITQHCC
Trigger: ACAGCAGTGCTGTGTGATGCAGCCTGACCTGTGGCA...AAAGCTCCTCTTTGAGATCTCCTCTGCAGGAATATCAGAGACGGAGTTGAAGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR GCA 90 bp GTCAGAAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCCGGGAGACAGAGGTTaGAGTGAGCTGAGGTCGTGC +
Preference number: 4 (lower is better)
Translates to: VRRPLLQMLQAMTCRESGPGDRG*SELRSC
Trigger: GCACGACCTCAGCTCACTGCAACCTCTGTCTCCCGG...ACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTTCTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616540.5
CDS-3UTR GCA 90 bp CCATGTATTGTGCTCTCACTAAAGACATACATAGAACAGAGAGATCCAAAATCACACTGCTGGCCCCGCTaGCCTTCAGGCGCTGCCGAG +
Preference number: 4 (lower is better)
Translates to: PCIVLSLKTYIEQRDPKSHCWPR*PSGAAE
Trigger: CTCGGCAGCGCCTGAAGGGCAGCGGGGCCAGCAGTG...TGATTTTGGATCTCTCTGTTCTATGTATGTCTTTAGTGAGAGCACAATACATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616540.5
CDS-3UTR GCA 90 bp CAAGTAATGTTTTCATGGTTGAGTGAGGAATATGGAGGAGCAATAGATGAGAGTGGGCCGTATCCCCACTaGTGGCCCCGCTGCCCTTCA +
Preference number: 4 (lower is better)
Translates to: QVMFSWLSEEYGGAIDESGPYPH*WPRCPS
Trigger: TGAAGGGCAGCGGGGCCAGCAGTGGGGATACGGCCC...ACTCTCATCTATTGCTCCTCCATATTCCTCACTCAACCATGAAAACATTACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000616540.5
CDS-3UTR CCA 90 bp AGAAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACGCAGCCTCCAGGGTTTaGGAAGAGGTGATGGCGGGT +
Preference number: 4 (lower is better)
Translates to: RRPLLQMLQAMTCRESGHAASRV*EEVMAG
Trigger: ACCCGCCATCACCTCTTCCCAAACCCTGGAGGCTGC...GTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398006.6
CDS-3UTR CCA 90 bp AGCCCCAGCTGCTACTCCCAGCACAGCAATGGAAGTCTTGTCCATATACCATCCGCGAATGGCATATGCTaGGGAATATTCCCAAGTCTG +
Preference number: 4 (lower is better)
Translates to: SPSCYSQHSNGSLVHIPSANGIC*GIFPSL
Trigger: CAGACTTGGGAATATTCCCCAGCATATGCCATTCGC...GGATGGTATATGGACAAGACTTCCATTGCTGTGCTGGGAGTAGCAGCTGGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612489.1
ENST00000613181.4
ENST00000619129.4
CDS-3UTR CCA 90 bp CCCCAGCTGCTACTCCCAGCACAGCAATGGAAGTCTTGTCCATATACCATCCAGGACAGTGTGGATGGTTaGGTCTGTAGCAATTCGGTA +
Preference number: 4 (lower is better)
Translates to: PQLLLPAQQWKSCPYTIQDSVDG*VCSNSV
Trigger: TACCGAATTGCTACAGACCCAACCATCCACACTGTC...CTGGATGGTATATGGACAAGACTTCCATTGCTGTGCTGGGAGTAGCAGCTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613181.4
ENST00000619129.4
CDS-3UTR CCA 90 bp CAGGGAGTCAGGTCACTGGAATCAATAGTTAACAAGATGGTTGTCCTTTGGGGCCACAGGTCTGCCTTCTaGGACAGTGTGGATGGTTGG +
Preference number: 4 (lower is better)
Translates to: QGVRSLESIVNKMVVLWGHRSAF*DSVDGW
Trigger: CCAACCATCCACACTGTCCCAGAAGGCAGACCTGTG...GCCCCAAAGGACAACCATCTTGTTAACTATTGATTCCAGTGACCTGACTCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR CCA 90 bp AGAGGCTTGCTAGTTCTCAGATGCCAGGCCAGAGTGTGGAGAACAGCTTATCACGAGAGTAAGGAAACCTaGGTTCCAGTCCCAGCTCTA +
Preference number: 4 (lower is better)
Translates to: RGLLVLRCQARVWRTAYHESKET*VPVPAL
Trigger: TAGAGCTGGGACTGGAACCCAGGTTTCCTTACTCTC...GTGATAAGCTGTTCTCCACACTCTGGCCTGGCATCTGAGAACTAGCAAGCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR CCA 90 bp GTCTTGCTGGAGGTGAAAAGGACATGTGGGTTGGCAACTAGGCTGTGTTCATTTTCCCAGCTACTCGGGTaGCTGAGGCATGAGAATTGC +
Preference number: 4 (lower is better)
Translates to: VLLEVKRTCGLATRLCSFSQLLG*LRHENC
Trigger: GCAATTCTCATGCCTCAGCCACCCGAGTAGCTGGGA...AAATGAACACAGCCTAGTTGCCAACCCACATGTCCTTTTCACCTCCAGCAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR CCA 90 bp CAGGGAGTCAGGTCACTGGAATCAATAGTTAACAAGATGGTTGTCCTTTGGGGCTCCCAGCTACTCGGGTaGCTGAGGCATGAGAATTGC +
Preference number: 4 (lower is better)
Translates to: QGVRSLESIVNKMVVLWGSQLLG*LRHENC
Trigger: GCAATTCTCATGCCTCAGCCACCCGAGTAGCTGGGA...GCCCCAAAGGACAACCATCTTGTTAACTATTGATTCCAGTGACCTGACTCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616540.5
3UTR CAA 72 bp CTGACAGGAAGGGGACATAGAATGCCCGCAGCAGCTTaGAAGATCTATGTGATGGTATTTGGAGGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: LTGRGHRMPAAA*KIYVMVFGGGP
Trigger: AGGCCCACCTCCAAATACCATCACATAGATCTTCAAAGCTGCTGCGGGCATTCTATGTCCCCTTCCTGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524671.1
3UTR CAA 72 bp GCCCCAGCTGCTACTCCCAGCACAGCAATGGAAGTCTaGTCCATATACCATCCAGTCATGGCTATCAACGTA +
Preference number: 4 (lower is better)
Translates to: APAATPSTAMEV*SIYHPVMAINV
Trigger: TACGTTGATAGCCATGACTGGATGGTATATGGACAAGACTTCCATTGCTGTGCTGGGAGTAGCAGCTGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612489.1
ENST00000613181.4
ENST00000619129.4
CDS-3UTR TCA 90 bp TTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAATCACCAATAGGACCTAGCTaGAGAGGGAGCTCGGGCCTC +
Preference number: 4 (lower is better)
Translates to: FITNVTGDDLQGVRSLESPIGPS*RGSSGL
Trigger: GAGGCCCGAGCTCCCTCTTCAGCTAGGTCCTATTGG...TGATTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398006.6
CDS-3UTR TCA 90 bp GTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAATCAATAGTTAACAAGACCCTTCCCCATAGATaGGGTAGTGTGTTGGCTCCC +
Preference number: 4 (lower is better)
Translates to: VTGDDLQGVRSLESIVNKTLPHR*GSVLAP
Trigger: GGGAGCCAACACACTACCTCATCTATGGGGAAGGGT...CTTGTTAACTATTGATTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
CDS-3UTR TCA 90 bp AGAAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACGCCCGTGATATCCTCTaGACAGTGCCACAGAGCGAG +
Preference number: 4 (lower is better)
Translates to: RRPLLQMLQAMTCRESGHARDIL*TVPQSE
Trigger: CTCGCTCTGTGGCACTGTTCAGAGGATATCACGGGC...GTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR TCA 90 bp GCAATGGAAGTCTTGTCCATATACCATCCAGTCATGGCTATCAACGTAGTGTACGCCCGTGATATCCTCTaGACAGTGCCACAGAGCGAG +
Preference number: 4 (lower is better)
Translates to: AMEVLSIYHPVMAINVVYARDIL*TVPQSE
Trigger: CTCGCTCTGTGGCACTGTTCAGAGGATATCACGGGC...GTACACTACGTTGATAGCCATGACTGGATGGTATATGGACAAGACTTCCATTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613181.4
ENST00000619129.4
CDS-3UTR TCA 90 bp CAGAAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCAGCCCGTGATATCCTCTaGACAGTGCCACAGAGCGAG +
Preference number: 4 (lower is better)
Translates to: QKTFITNVTGDDLQGVRSARDIL*TVPQSE
Trigger: CTCGCTCTGTGGCACTGTTCAGAGGATATCACGGGC...TGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR TCA 90 bp AATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAATCAATAGTTAACGCCCGTGATATCCTCTaGACAGTGCCACAGAGCGAG +
Preference number: 4 (lower is better)
Translates to: NVTGDDLQGVRSLESIVNARDIL*TVPQSE
Trigger: CTCGCTCTGTGGCACTGTTCAGAGGATATCACGGGC...GTTAACTATTGATTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR TCA 90 bp AGAGGCTTGCTAGTTCTCAGATGCCAGGCCAGAGTGTGGAGAACAGCTTATCACACGTACACTGTATACTaGTCTGACAGGAAGGGGACA +
Preference number: 4 (lower is better)
Translates to: RGLLVLRCQARVWRTAYHTYTVY*SDRKGT
Trigger: TGTCCCCTTCCTGTCAGATCAGTATACAGTGTACGT...GTGATAAGCTGTTCTCCACACTCTGGCCTGGCATCTGAGAACTAGCAAGCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR TCA 90 bp CAGGGAGTCAGGTCACTGGAATCAATAGTTAACAAGATGGTTGTCCTTTGGGGCTGGTCACCTTTTTCCTaGGATAGCTCCAGGACAGGG +
Preference number: 4 (lower is better)
Translates to: QGVRSLESIVNKMVVLWGWSPFS*DSSRTG
Trigger: CCCTGTCCTGGAGCTATCTCAGGAAAAAGGTGACCA...GCCCCAAAGGACAACCATCTTGTTAACTATTGATTCCAGTGACCTGACTCCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616540.5
CDS-3UTR TCA 90 bp GTCAGGCTGCATCACACAGCACTGCTGTGCTGGTCTAACACACAGGCAGACTGGCACTTTACTGCTTCCTaGTTTCATTTGCAGCATGAA +
Preference number: 4 (lower is better)
Translates to: VRLHHTALLCWSNTQADWHFTAS*FHLQHE
Trigger: TTCATGCTGCAAATGAAATCAGGAAGCAGTAAAGTG...CCAGTCTGCCTGTGTGTTAGACCAGCACAGCAGTGCTGTGTGATGCAGCCTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR GCA 90 bp GGTAAACCAAGAGCTGCACTGAATGGCCAGCCTAAGATAGCCCCAGCTGCTACTAATTCTTGCATGAAATaGAGCTGGCCAGGCATGAAG +
Preference number: 4 (lower is better)
Translates to: GKPRAALNGQPKIAPAATNSCMK*SWPGMK
Trigger: CTTCATGCCTGGCCAGCTGCATTTCATGCAAGAATT...AGTAGCAGCTGGGGCTATCTTAGGCTGGCCATTCAGTGCAGCTCTTGGTTTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613181.4
ENST00000619129.4
CDS-3UTR GCA 90 bp GCCCCAGCTGCTACTCCCAGCACAGCAATGGAAGTCTTGTCCATATACCATCCACTTCCTGATTTGCTTTaGTTTCCGGGGTTTGAGGAT +
Preference number: 4 (lower is better)
Translates to: APAATPSTAMEVLSIYHPLPDLL*FPGFED
Trigger: ATCCTCAAACCCCGGAAAGCAAAGCAAATCAGGAAG...TGGATGGTATATGGACAAGACTTCCATTGCTGTGCTGGGAGTAGCAGCTGGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619129.4
CDS-3UTR GCA 90 bp TTGTCTTCTTGCAGCCATGTGAGGATACAAGTCAGCTGTCTGCAGCCAGAAAGATTACAGGCGATGACTTaGAGGGAGTCAGGTCACTGG +
Preference number: 4 (lower is better)
Translates to: LSSCSHVRIQVSCLQPERLQAMT*RESGHW
Trigger: CCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAA...TCTTTCTGGCTGCAGACAGCTGACTTGTATCCTCACATGGCTGCAAGAAGACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524671.1
CDS-3UTR GCA 90 bp GGGGCCACAGGTGTGTTGCTAACCTCCACTTTTCTTCCTGATTTGCTTTGCTTTTTACAGGCGATGACTTaGAGGGAGTCAGGTCACTGG +
Preference number: 4 (lower is better)
Translates to: GATGVLLTSTFLPDLLCFLQAMT*RESGHW
Trigger: CCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAA...AAAGCAAAGCAAATCAGGAAGAAAAGTGGAGGTTAGCAACACACCTGTGGCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000524671.1
ENST00000525910.1
ENST00000619129.4
CDS-3UTR GCA 90 bp TCCTTTGGGGCCACAGGTGTGTTGCTAACCTCCACTTTTCTTCCTGATTTGCTTTTACAGGCGATGACTTaGAGGGAGTCAGGTCACTGG +
Preference number: 4 (lower is better)
Translates to: SFGATGVLLTSTFLPDLLLQAMT*RESGHW
Trigger: CCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAA...AAGCAAATCAGGAAGAAAAGTGGAGGTTAGCAACACACCTGTGGCCCCAAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000524671.1
ENST00000525910.1
ENST00000619129.4
CDS-3UTR GCA 90 bp GTCAGGCTGCATCACACAGCACTGCTGTGCTGGTCTAACACACAGGCAGACTGGTTTAGGGCCTTTCTCTaGCTAGCTGCAAAAAGTTTA +
Preference number: 4 (lower is better)
Translates to: VRLHHTALLCWSNTQADWFRAFL*LAAKSL
Trigger: TAAACTTTTTGCAGCTAGGCAGAGAAAGGCCCTAAA...CCAGTCTGCCTGTGTGTTAGACCAGCACAGCAGTGCTGTGTGATGCAGCCTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616540.5
CDS-3UTR GCA 90 bp ATCTTTCAAGCAAGGGGGAGCCCAGTCTATCCTCACACACTCCCCAGTTATTGTCCTGTAAGTTGGTTCTaGTCTTCTCCGGTCTCCACT +
Preference number: 4 (lower is better)
Translates to: IFQARGSPVYPHTLPSYCPVSWF*SSPVST
Trigger: AGTGGAGACCGGAGAAGAGCAGAACCAACTTACAGG...ACAATAACTGGGGAGTGTGTGAGGATAGACTGGGCTCCCCCTTGCTTGAAAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532425.6
CDS-3UTR GCA 90 bp AATGGTCACCTTTTTCCTGAGATAGCTCCAGGACAGGGTCCTAGTCCTGTGAAGTTGCTAGTTCTCAGATaGCAGGCCAGAGTGTGGAGA +
Preference number: 4 (lower is better)
Translates to: NGHLFPEIAPGQGPSPVKLLVLR*QARVWR
Trigger: TCTCCACACTCTGGCCTGGCATCTGAGAACTAGCAA...CTTCACAGGACTAGGACCCTGTCCTGGAGCTATCTCAGGAAAAAGGTGACCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR GCA 90 bp TCAGAGAACCATGCATTTGCCAAGTATACCTACTCCCTCACTCACCCCATGATCAGGTCTGCTAGGAGCTaGCAAACAGCTTTGGTGGAG +
Preference number: 4 (lower is better)
Translates to: SENHAFAKYTYSLTHPMIRSARS*QTALVE
Trigger: CTCCACCAAAGCTGTTTGGCAGCTCCTAGCAGACCT...GATCATGGGGTGAGTGAGGGAGTAGGTATACTTGGCAAATGCATGGTTCTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR GCA 90 bp TCAGAGAACCATGCATTTGCCAAGTATACCTACTCCCTCACTCACCCCATGATCCACACAGCACTGCTGTaGTGGTCTAACACACAGGCA +
Preference number: 4 (lower is better)
Translates to: SENHAFAKYTYSLTHPMIHTALL*WSNTQA
Trigger: TGCCTGTGTGTTAGACCAGCACAGCAGTGCTGTGTG...GATCATGGGGTGAGTGAGGGAGTAGGTATACTTGGCAAATGCATGGTTCTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR GCA 90 bp TTAGGTCACAGTTCCTCAAATGGTCACCTTTTTCCTGAGATAGCTCCAGGACAGTGCCACAGGTCAGGCTaGATCACACAGCACTGCTGT +
Preference number: 4 (lower is better)
Translates to: LGHSSSNGHLFPEIAPGQCHRSG*ITQHCC
Trigger: ACAGCAGTGCTGTGTGATGCAGCCTGACCTGTGGCA...CTGTCCTGGAGCTATCTCAGGAAAAAGGTGACCATTTGAGGAACTGTGACCTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR GCA 90 bp AGAGGCTTGCTAGTTCTCAGATGCCAGGCCAGAGTGTGGAGAACAGCTTATCACTTTCCAAGGAATCCCTaGATCAGTCCTGGCCTTTCT +
Preference number: 4 (lower is better)
Translates to: RGLLVLRCQARVWRTAYHFPRNP*ISPGLS
Trigger: AGAAAGGCCAGGACTGATGCAGGGATTCCTTGGAAA...GTGATAAGCTGTTCTCCACACTCTGGCCTGGCATCTGAGAACTAGCAAGCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR GCA 90 bp AACTTGAGCCATGGTGGTTTGCTGCACAGATCAACCCATCACCTAGATATTAAGGGCCCCAGTGTATGTTaGTCCCCTCCCTGTGTCCAT +
Preference number: 4 (lower is better)
Translates to: NLSHGGLLHRSTHHLDIKGPSVC*SPPCVH
Trigger: ATGGACACAGGGAGGGGAGCAACATACACTGGGGCC...CTTAATATCTAGGTGATGGGTTGATCTGTGCAGCAAACCACCATGGCTCAAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618252.1
CDS-3UTR CCA 90 bp AGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGCACAGGTCTGCCTTCTaGGACAGTGTGGATGGTTGG +
Preference number: 4 (lower is better)
Translates to: RPLLQMLQAMTCRESGHWHRSAF*DSVDGW
Trigger: CCAACCATCCACACTGTCCCAGAAGGCAGACCTGTG...CCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR CCA 90 bp GTCTTGCTGGAGGTGAAAAGGACATGTGGGTTGGCAACTAGGCTGTGTTCATTTGCTGCCAAACAGCTTTaGTGGAGAAGCCCATATGGC +
Preference number: 4 (lower is better)
Translates to: VLLEVKRTCGLATRLCSFAAKQL*WRSPYG
Trigger: GCCATATGGGCTTCTCCACCAAAGCTGTTTGGCAGC...AAATGAACACAGCCTAGTTGCCAACCCACATGTCCTTTTCACCTCCAGCAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR CCA 90 bp AATGGTCACCTTTTTCCTGAGATAGCTCCAGGACAGGGTCCTAGTCCTGTGAAGGCCTACCGTGCAGACTaGTTCAGTAATGGTACTCAG +
Preference number: 4 (lower is better)
Translates to: NGHLFPEIAPGQGPSPVKAYRAD*FSNGTQ
Trigger: CTGAGTACCATTACTGAACCAGTCTGCACGGTAGGC...CTTCACAGGACTAGGACCCTGTCCTGGAGCTATCTCAGGAAAAAGGTGACCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
3UTR CAA 72 bp TCAATAAGAAGGTCTGCTAGGAGCTGCCAAACAGCTTaGGTGGAGAAGCCCATATGGCCTAAGAGAGGCTTG +
Preference number: 4 (lower is better)
Translates to: SIRRSARSCQTA*VEKPIWPKRGL
Trigger: CAAGCCTCTCTTAGGCCATATGGGCTTCTCCACCAAAGCTGTTTGGCAGCTCCTAGCAGACCTTCTTATTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR TCA 90 bp TCATGTCAGAAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCGCGAAGACTGAATGCTaGCCCGCCCAGGAAGACCAA +
Preference number: 4 (lower is better)
Translates to: SCQKTFITNVTGDDLQGVAKTEC*PAQEDQ
Trigger: TTGGTCTTCCTGGGCGGGTCAGCATTCAGTCTTCGC...GACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTTCTGACATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398006.6
CDS-3UTR TCA 90 bp GTCAGGTCACTGGAATCAATAGTTAACAAGATGGTTGTCCTTTGGGGCCACAGGGCACCAGAAATAGTATaGGGGCCATCAGCGACCAAT +
Preference number: 4 (lower is better)
Translates to: VRSLESIVNKMVVLWGHRAPEIV*GPSATN
Trigger: ATTGGTCGCTGATGGCCCTCATACTATTTCTGGTGC...CCTGTGGCCCCAAAGGACAACCATCTTGTTAACTATTGATTCCAGTGACCTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR TCA 90 bp AGAGGCTTGCTAGTTCTCAGATGCCAGGCCAGAGTGTGGAGAACAGCTTATCACCACTGTATACTGATCTaGCAGGAAGGGGACATAGAA +
Preference number: 4 (lower is better)
Translates to: RGLLVLRCQARVWRTAYHHCILI*QEGDIE
Trigger: TTCTATGTCCCCTTCCTGTCAGATCAGTATACAGTG...GTGATAAGCTGTTCTCCACACTCTGGCCTGGCATCTGAGAACTAGCAAGCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR TCA 90 bp CGTACACTGTATACTGATCTGACAGGAAGGGGACATAGAATGCCCGCAGCAGCTCACTGTATACTGATCTaGCAGGAAGGGGACATAGAA +
Preference number: 4 (lower is better)
Translates to: RTLYTDLTGRGHRMPAAAHCILI*QEGDIE
Trigger: TTCTATGTCCCCTTCCTGTCAGATCAGTATACAGTG...AGCTGCTGCGGGCATTCTATGTCCCCTTCCTGTCAGATCAGTATACAGTGTACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000524671.1
ENST00000525910.1
ENST00000619129.4
CDS-3UTR TCA 90 bp TTTGGGGCCACAGGTGTGTTGCTAACCTCCACTTTTCTTCCTGATTTGCTTTGCAAATGTTACAGGCGATaGCTTGCAGGGAGTCAGGTC +
Preference number: 4 (lower is better)
Translates to: FGATGVLLTSTFLPDLLCKCYRR*LAGSQV
Trigger: GACCTGACTCCCTGCAAGTCATCGCCTGTAACATTT...GCAAAGCAAATCAGGAAGAAAAGTGGAGGTTAGCAACACACCTGTGGCCCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000524671.1
ENST00000525910.1
ENST00000619129.4
CDS-3UTR TCA 90 bp TTGTCTTCTTGCAGCCATGTGAGGATACAAGTCAGCTGTCTGCAGCCAGAAAGACTTCTTGCAGCCATGTaGGGATACAAGTCAGCTGTC +
Preference number: 4 (lower is better)
Translates to: LSSCSHVRIQVSCLQPERLLAAM*GYKSAV
Trigger: GACAGCTGACTTGTATCCTCACATGGCTGCAAGAAG...TCTTTCTGGCTGCAGACAGCTGACTTGTATCCTCACATGGCTGCAAGAAGACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524671.1
CDS-3UTR TCA 90 bp TTAGGTCACAGTTCCTCAAATGGTCACCTTTTTCCTGAGATAGCTCCAGGACAGTGGTCACCTTTTTCCTaGGATAGCTCCAGGACAGGG +
Preference number: 4 (lower is better)
Translates to: LGHSSSNGHLFPEIAPGQWSPFS*DSSRTG
Trigger: CCCTGTCCTGGAGCTATCTCAGGAAAAAGGTGACCA...CTGTCCTGGAGCTATCTCAGGAAAAAGGTGACCATTTGAGGAACTGTGACCTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR TCA 90 bp AAGCCCATATGGCCTAAGAGAGGCTTGCTAGTTCTCAGATGCCAGGCCAGAGTGTTATCATTGCCTATTTaGCTAGAAGTGCCCCATGCA +
Preference number: 4 (lower is better)
Translates to: KPIWPKRGLLVLRCQARVLSLPI*LEVPHA
Trigger: TGCATGGGGCACTTCTAGTCAAATAGGCAATGATAA...CACTCTGGCCTGGCATCTGAGAACTAGCAAGCCTCTCTTAGGCCATATGGGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR TCA 90 bp AATGGTCACCTTTTTCCTGAGATAGCTCCAGGACAGGGTCCTAGTCCTGTGAAGAAGGCACCTATAATGTaGCCCCAGATTGACTACAGG +
Preference number: 4 (lower is better)
Translates to: NGHLFPEIAPGQGPSPVKKAPIM*PQIDYR
Trigger: CCTGTAGTCAATCTGGGGTCACATTATAGGTGCCTT...CTTCACAGGACTAGGACCCTGTCCTGGAGCTATCTCAGGAAAAAGGTGACCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR TCA 90 bp GTCAGGCTGCATCACACAGCACTGCTGTGCTGGTCTAACACACAGGCAGACTGGAAAAGTGATAGGAACTaGTATTTCCAAGGAATCCCT +
Preference number: 4 (lower is better)
Translates to: VRLHHTALLCWSNTQADWKSDRN*YFQGIP
Trigger: AGGGATTCCTTGGAAATATCAGTTCCTATCACTTTT...CCAGTCTGCCTGTGTGTTAGACCAGCACAGCAGTGCTGTGTGATGCAGCCTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR TCA 90 bp ATCTTTCAAGCAAGGGGGAGCCCAGTCTATCCTCACACACTCCCCAGTTATTGTTCTGAGCAGGTGTGTTaGAACTGTTTTTCCCAGGCA +
Preference number: 4 (lower is better)
Translates to: IFQARGSPVYPHTLPSYCSEQVC*NCFSQA
Trigger: TGCCTGGGAAAAACAGTTTCAACACACCTGCTCAGA...ACAATAACTGGGGAGTGTGTGAGGATAGACTGGGCTCCCCCTTGCTTGAAAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR TCA 90 bp TCACTGGAATCAATAGTTAACAAGATGGTTGTCCTTTGGGGCCACAGGTGTGTTGAGGTTGCAGTGAGCTaGGGTCGTGCCATTGTGTTC +
Preference number: 4 (lower is better)
Translates to: SLESIVNKMVVLWGHRCVEVAVS*GRAIVF
Trigger: GAACACAATGGCACGACCTCAGCTCACTGCAACCTC...AACACACCTGTGGCCCCAAAGGACAACCATCTTGTTAACTATTGATTCCAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616540.5
CDS-3UTR TCA 90 bp TTGCAGGGAGTCAGGTCACTGGAATCAATAGTTAACAAGATGGTTGTCCTTTGGACCCTTCCCCATAGATaGGGTAGTGTGTTCGGTCCG +
Preference number: 4 (lower is better)
Translates to: LQGVRSLESIVNKMVVLWTLPHR*GSVFGP
Trigger: CGGACCGAACACACTACCTCATCTATGGGGAAGGGT...CCAAAGGACAACCATCTTGTTAACTATTGATTCCAGTGACCTGACTCCCTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619129.4
CDS-3UTR GCA 90 bp ATCTTTCAAGCAAGGGGGAGCCCAGTCTATCCTCACACACTCCCCAGTTATTGTGGAGCGAATGGCATATaGTGGGGAATATTCCCAAGT +
Preference number: 4 (lower is better)
Translates to: IFQARGSPVYPHTLPSYCGANGI*WGIFPS
Trigger: ACTTGGGAATATTCCCCAGCATATGCCATTCGCTCC...ACAATAACTGGGGAGTGTGTGAGGATAGACTGGGCTCCCCCTTGCTTGAAAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000616540.5
CDS-3UTR GCA 90 bp TTAGGTCACAGTTCCTCAAATGGTCACCTTTTTCCTGAGATAGCTCCAGGACAGAGGTCTGCTAGGAGCTaGCAAACAGCTTTGGTGGAG +
Preference number: 4 (lower is better)
Translates to: LGHSSSNGHLFPEIAPGQRSARS*QTALVE
Trigger: CTCCACCAAAGCTGTTTGGCAGCTCCTAGCAGACCT...CTGTCCTGGAGCTATCTCAGGAAAAAGGTGACCATTTGAGGAACTGTGACCTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR GCA 90 bp GTCAGGTCACTGGAATCAATAGTTAACAAGATGGTTGTCCTTTGGGGCCACAGGACTAGAAGTGCCCCATaGAGGATGTGCCTCACAACA +
Preference number: 4 (lower is better)
Translates to: VRSLESIVNKMVVLWGHRTRSAP*RMCLTT
Trigger: TGTTGTGAGGCACATCCTGCATGGGGCACTTCTAGT...CCTGTGGCCCCAAAGGACAACCATCTTGTTAACTATTGATTCCAGTGACCTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616540.5
CDS-3UTR GCA 90 bp AGAGGCTTGCTAGTTCTCAGATGCCAGGCCAGAGTGTGGAGAACAGCTTATCACAATTTTGGTAGCAGATaGCTACCGTGCAGACTGGTT +
Preference number: 4 (lower is better)
Translates to: RGLLVLRCQARVWRTAYHNFGSR*LPCRLV
Trigger: AACCAGTCTGCACGGTAGGCATCTGCTACCAAAATT...GTGATAAGCTGTTCTCCACACTCTGGCCTGGCATCTGAGAACTAGCAAGCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR GCA 90 bp GTCTTGCTGGAGGTGAAAAGGACATGTGGGTTGGCAACTAGGCTGTGTTCATTTTTGCCACTGGAGCTTTaGCCAAATGGTCACCGTAGA +
Preference number: 4 (lower is better)
Translates to: VLLEVKRTCGLATRLCSFLPLEL*PNGHRR
Trigger: TCTACGGTGACCATTTGGGCAAAGCTCCAGTGGCAA...AAATGAACACAGCCTAGTTGCCAACCCACATGTCCTTTTCACCTCCAGCAAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR CCA 90 bp AGGTCACTGGAATCAATAGTTAACAAGATGGTTGTCCTTTGGGGCCACAGGTGTAGTTTTACAGCGCAGTaGAGGGATCTAAGGTGGGCG +
Preference number: 4 (lower is better)
Translates to: RSLESIVNKMVVLWGHRCSFTAQ*RDLRWA
Trigger: CGCCCACCTTAGATCCCTCCACTGCGCTGTAAAACT...ACACCTGTGGCCCCAAAGGACAACCATCTTGTTAACTATTGATTCCAGTGACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398006.6
CDS-3UTR CCA 90 bp ATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAATCAATAGAGGTGATGGCGGGTTaGATGGGCCCAGTAAAGGGT +
Preference number: 4 (lower is better)
Translates to: ITNVTGDDLQGVRSLESIEVMAG*MGPVKG
Trigger: ACCCTTTACTGGGCCCATCCAACCCGCCATCACCTC...TATTGATTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398006.6
CDS-3UTR CCA 90 bp CTCCCAGCACAGCAATGGAAGTCTTGTCCATATACCATCCAGTCATGGCTATCATGCATGAAATGCAGCTaGCCAGGCATGAAGCAACAG +
Preference number: 4 (lower is better)
Translates to: LPAQQWKSCPYTIQSWLSCMKCS*PGMKQQ
Trigger: CTGTTGCTTCATGCCTGGCCAGCTGCATTTCATGCA...TGATAGCCATGACTGGATGGTATATGGACAAGACTTCCATTGCTGTGCTGGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612489.1
ENST00000613181.4
ENST00000619129.4
CDS-3UTR CCA 90 bp CGCTTCAACTCCGTCTCTGATATTCCTGCAGAGGAGATCTCAAAGAGGAGCTTTTGCATGAAATGCAGCTaGCCAGGCATGAAGCAACAG +
Preference number: 4 (lower is better)
Translates to: RFNSVSDIPAEEISKRSFCMKCS*PGMKQQ
Trigger: CTGTTGCTTCATGCCTGGCCAGCTGCATTTCATGCA...AAAGCTCCTCTTTGAGATCTCCTCTGCAGGAATATCAGAGACGGAGTTGAAGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616540.5
CDS-3UTR CCA 90 bp TCACTGGAATCAATAGTTAACAAGATGGTTGTCCTTTGGGGCCACAGGTGTGTTCACAGGTCTGCCTTCTaGGACAGTGTGGATGGTTGG +
Preference number: 4 (lower is better)
Translates to: SLESIVNKMVVLWGHRCVHRSAF*DSVDGW
Trigger: CCAACCATCCACACTGTCCCAGAAGGCAGACCTGTG...AACACACCTGTGGCCCCAAAGGACAACCATCTTGTTAACTATTGATTCCAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR CCA 90 bp AAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGCACAGGTCTGCCTTCTaGGACAGTGTGGATGGTTGG +
Preference number: 4 (lower is better)
Translates to: KTFITNVTGDDLQGVRSLHRSAF*DSVDGW
Trigger: CCAACCATCCACACTGTCCCAGAAGGCAGACCTGTG...CAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR CCA 90 bp TACAGATACACCAGAAAGCCTCTGAAATCCAACGATGCCATACGGAAGTCTGATCACAGGTCTGCCTTCTaGGACAGTGTGGATGGTTGG +
Preference number: 4 (lower is better)
Translates to: YRYTRKPLKSNDAIRKSDHRSAF*DSVDGW
Trigger: CCAACCATCCACACTGTCCCAGAAGGCAGACCTGTG...ATCAGACTTCCGTATGGCATCGTTGGATTTCAGAGGCTTTCTGGTGTATCTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR CCA 90 bp GCCCCAGCTGCTACTCCCAGCACAGCAATGGAAGTCTTGTCCATATACCATCCAAGAAGCATCAAGGAATaGTCTATAGGCCAAGCTGAT +
Preference number: 4 (lower is better)
Translates to: APAATPSTAMEVLSIYHPRSIKE*SIGQAD
Trigger: ATCAGCTTGGCCTATAGACCATTCCTTGATGCTTCT...TGGATGGTATATGGACAAGACTTCCATTGCTGTGCTGGGAGTAGCAGCTGGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619129.4
CDS-3UTR CCA 90 bp CAGGGAGTCAGGTCACTGGAATCAATAGTTAACAAGATGGTTGTCCTTTGGGGCAAGATGGTTGTCCTTTaGGGCCACAGGTGTGTTGCT +
Preference number: 4 (lower is better)
Translates to: QGVRSLESIVNKMVVLWGKMVVL*GHRCVA
Trigger: AGCAACACACCTGTGGCCCCAAAGGACAACCATCTT...GCCCCAAAGGACAACCATCTTGTTAACTATTGATTCCAGTGACCTGACTCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000398006.6
ENST00000524671.1
ENST00000525910.1
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR CCA 90 bp AACAAGATGGTTGTCCTTTGGGGCCACAGGTGTGTTGCTAACCTCCACTTTTCTAAGATGGTTGTCCTTTaGGGCCACAGGTGTGTTGCT +
Preference number: 4 (lower is better)
Translates to: NKMVVLWGHRCVANLHFSKMVVL*GHRCVA
Trigger: AGCAACACACCTGTGGCCCCAAAGGACAACCATCTT...AGAAAAGTGGAGGTTAGCAACACACCTGTGGCCCCAAAGGACAACCATCTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000524671.1
ENST00000525910.1
ENST00000619129.4
CDS-3UTR CCA 90 bp CAGAAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCAAGACATAGCTTTGGCTaGCAAACGGTGTCCGCCGAG +
Preference number: 4 (lower is better)
Translates to: QKTFITNVTGDDLQGVRSRHSFG*QTVSAE
Trigger: CTCGGCGGACACCGTTTGCCAGCCAAAGCTATGTCT...TGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616540.5
CDS-3UTR CCA 90 bp GACATTATACAAAACAATGTTGAGTGGTGCAATCACCAACTTCCCATAATAGTACCGTATCCCCACTGCTaGCCCCGCTGCCCTTCAGGC +
Preference number: 4 (lower is better)
Translates to: DIIQNNVEWCNHQLPIIVPYPHC*PRCPSG
Trigger: GCCTGAAGGGCAGCGGGGCCAGCAGTGGGGATACGG...TACTATTATGGGAAGTTGGTGATTGCACCACTCAACATTGTTTTGTATAATGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000613181.4
ENST00000618252.1
ENST00000619129.4
CDS-3UTR TCA 90 bp TTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAATCAACCCTTCCCCATAGATaGGGTAGTGTGTTGGCTCCC +
Preference number: 4 (lower is better)
Translates to: FITNVTGDDLQGVRSLESTLPHR*GSVLAP
Trigger: GGGAGCCAACACACTACCTCATCTATGGGGAAGGGT...TGATTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
CDS-3UTR TCA 90 bp TTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAATCAAACCCTTCCCCATAGATaGGGTAGTGTGTTGGCTCCC +
Preference number: 4 (lower is better)
Translates to: LLQMLQAMTCRESGHWNQTLPHR*GSVLAP
Trigger: GGGAGCCAACACACTACCTCATCTATGGGGAAGGGT...TTGATTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
CDS-3UTR TCA 90 bp ACTCCCAGCACAGCAATGGAAGTCTTGTCCATATACCATCCAGTCATGGCTATCTGTAGAATTCTTGCATaGAATGCAGCTGGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: TPSTAMEVLSIYHPVMAICRILA*NAAGQA
Trigger: TGCCTGGCCAGCTGCATTTCATGCAAGAATTCTACA...GATAGCCATGACTGGATGGTATATGGACAAGACTTCCATTGCTGTGCTGGGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612489.1
ENST00000613181.4
ENST00000619129.4
CDS-3UTR TCA 90 bp CCCAGCACAGCAATGGAAGTCTTGTCCATATACCATCCAGTCATGGCTATCAACTGTAGAATTCTTGCATaGAATGCAGCTGGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: PSTAMEVLSIYHPVMAINCRILA*NAAGQA
Trigger: TGCCTGGCCAGCTGCATTTCATGCAAGAATTCTACA...GTTGATAGCCATGACTGGATGGTATATGGACAAGACTTCCATTGCTGTGCTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612489.1
ENST00000613181.4
ENST00000619129.4
CDS-3UTR TCA 90 bp GTCTTGCTGGAGGTGAAAAGGACATGTGGGTTGGCAACTAGGCTGTGTTCATTTAAAACATGCCAGTGCTaGGAACCAAGAAGGCTAGCA +
Preference number: 4 (lower is better)
Translates to: VLLEVKRTCGLATRLCSFKTCQC*EPRRLA
Trigger: TGCTAGCCTTCTTGGTTCTCAGCACTGGCATGTTTT...AAATGAACACAGCCTAGTTGCCAACCCACATGTCCTTTTCACCTCCAGCAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616540.5
CDS-3UTR TCA 90 bp AGAACCAAGAAGGCTAGCATCATTCGACTCACGTGCAACCCAAACTTCTTGCACAAAACATGCCAGTGCTaGGAACCAAGAAGGCTAGCA +
Preference number: 4 (lower is better)
Translates to: RTKKASIIRLTCNPNFLHKTCQC*EPRRLA
Trigger: TGCTAGCCTTCTTGGTTCTCAGCACTGGCATGTTTT...GTGCAAGAAGTTTGGGTTGCACGTGAGTCGAATGATGCTAGCCTTCTTGGTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612489.1
ENST00000619129.4
CDS-3UTR TCA 90 bp AGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGGCCATCAGCGACCAATaGAAGAAACTCTTCCACCTG +
Preference number: 4 (lower is better)
Translates to: RPLLQMLQAMTCRESGHWAISDQ*KKLFHL
Trigger: CAGGTGGAAGAGTTTCTTTCATTGGTCGCTGATGGC...CCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR TCA 90 bp AGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGGCACCAGAAATAGTATaGGGGCCATCAGCGACCAAT +
Preference number: 4 (lower is better)
Translates to: RPLLQMLQAMTCRESGHWAPEIV*GPSATN
Trigger: ATTGGTCGCTGATGGCCCTCATACTATTTCTGGTGC...CCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR TCA 90 bp CAGGGAGTCAGGTCACTGGAATCAATAGTTAACAAGATGGTTGTCCTTTGGGGCAATAGTAGCTGTCAATaGCCACCACAGGCACCAGAA +
Preference number: 4 (lower is better)
Translates to: QGVRSLESIVNKMVVLWGNSSCQ*PPQAPE
Trigger: TTCTGGTGCCTGTGGTGGTCATTGACAGCTACTATT...GCCCCAAAGGACAACCATCTTGTTAACTATTGATTCCAGTGACCTGACTCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR TCA 90 bp CCAGCACAGCAATGGAAGTCTTGTCCATATACCATCCAGTCATGGCTATCAACGCACAGAGCGAGAAAATaGCAAGAGCCCAAACAGGAA +
Preference number: 4 (lower is better)
Translates to: PAQQWKSCPYTIQSWLSTHRARK*QEPKQE
Trigger: TTCCTGTTTGGGCTCTTGTCATTTTCTCGCTCTGTG...CGTTGATAGCCATGACTGGATGGTATATGGACAAGACTTCCATTGCTGTGCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613181.4
ENST00000619129.4
CDS-3UTR TCA 90 bp AGAAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACAAATCAAGGGGCCCGTaGTATCCTCTGAACAGTGCC +
Preference number: 4 (lower is better)
Translates to: RRPLLQMLQAMTCRESGHKSRGP*YPLNSA
Trigger: GGCACTGTTCAGAGGATATCACGGGCCCCTTGATTT...GTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR TCA 90 bp ACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAATCAATAGTTAAATCAAGGGGCCCGTaGTATCCTCTGAACAGTGCC +
Preference number: 4 (lower is better)
Translates to: TNVTGDDLQGVRSLESIVKSRGP*YPLNSA
Trigger: GGCACTGTTCAGAGGATATCACGGGCCCCTTGATTT...AACTATTGATTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR TCA 90 bp CAGAAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCAAAATCAAGGGGCCCGTaGTATCCTCTGAACAGTGCC +
Preference number: 4 (lower is better)
Translates to: QKTFITNVTGDDLQGVRSKSRGP*YPLNSA
Trigger: GGCACTGTTCAGAGGATATCACGGGCCCCTTGATTT...TGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR TCA 90 bp GATGACTTGCAGGGAGTCAGGTCACTGGAATCAATAGTTAACAAGATGGTTGTCAAATCAAGGGGCCCGTaGTATCCTCTGAACAGTGCC +
Preference number: 4 (lower is better)
Translates to: DDLQGVRSLESIVNKMVVKSRGP*YPLNSA
Trigger: GGCACTGTTCAGAGGATATCACGGGCCCCTTGATTT...GACAACCATCTTGTTAACTATTGATTCCAGTGACCTGACTCCCTGCAAGTCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR TCA 90 bp CCATCCAGTCATGGCTATCAACGTAGTGTACATACAGAAGCTACTAGGAAGGAAAAATCAAGGGGCCCGTaGTATCCTCTGAACAGTGCC +
Preference number: 4 (lower is better)
Translates to: PSSHGYQRSVHTEATRKEKSRGP*YPLNSA
Trigger: GGCACTGTTCAGAGGATATCACGGGCCCCTTGATTT...TTCCTTCCTAGTAGCTTCTGTATGTACACTACGTTGATAGCCATGACTGGATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000619129.4
CDS-3UTR TCA 90 bp ATCTTTCAAGCAAGGGGGAGCCCAGTCTATCCTCACACACTCCCCAGTTATTGTTCTGATGGAATGAACTaGAGCTGCCAATTGTCAGGA +
Preference number: 4 (lower is better)
Translates to: IFQARGSPVYPHTLPSYCSDGMN*SCQLSG
Trigger: TCCTGACAATTGGCAGCTTCAGTTCATTCCATCAGA...ACAATAACTGGGGAGTGTGTGAGGATAGACTGGGCTCCCCCTTGCTTGAAAGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR TCA 90 bp AGAGGCTTGCTAGTTCTCAGATGCCAGGCCAGAGTGTGGAGAACAGCTTATCACAAAGGTTTTGGTAACTaGCCTCTGAACTCTGATGGA +
Preference number: 4 (lower is better)
Translates to: RGLLVLRCQARVWRTAYHKGFGN*PLNSDG
Trigger: TCCATCAGAGTTCAGAGGTCAGTTACCAAAACCTTT...GTGATAAGCTGTTCTCCACACTCTGGCCTGGCATCTGAGAACTAGCAAGCCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR TCA 90 bp CGCTTCAACTCCGTCTCTGATATTCCTGCAGAGGAGATCTCAAAGAGGAGCTTTCTCCACTTTTCTTCCTaGTTTGCTTTGCTTTCCGGG +
Preference number: 4 (lower is better)
Translates to: RFNSVSDIPAEEISKRSFLHFSS*FALLSG
Trigger: CCCGGAAAGCAAAGCAAATCAGGAAGAAAAGTGGAG...AAAGCTCCTCTTTGAGATCTCCTCTGCAGGAATATCAGAGACGGAGTTGAAGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR TCA 90 bp GATGAGCAAAACATGCCAGTGCTGAGAACCAAGAAGGCTAGCATCATTCGACTCCTCCACTTTTCTTCCTaGTTTGCTTTGCTTTCCGGG +
Preference number: 4 (lower is better)
Translates to: DEQNMPVLRTKKASIIRLLHFSS*FALLSG
Trigger: CCCGGAAAGCAAAGCAAATCAGGAAGAAAAGTGGAG...GAGTCGAATGATGCTAGCCTTCTTGGTTCTCAGCACTGGCATGTTTTGCTCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619129.4
CDS-3UTR TCA 90 bp CAGAAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCATGCCCGCAGCAGCTTTaGAGATTTGGGAGACTGAGA +
Preference number: 4 (lower is better)
Translates to: QKTFITNVTGDDLQGVRSCPQQL*RFGRLR
Trigger: TCTCAGTCTCCCAAATCTTCAAAGCTGCTGCGGGCA...TGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525910.1
CDS-3UTR TCA 90 bp GTCAGGTCACTGGAATCAATAGTTAACAAGATGGTTGTCCTTTGGGGCCACAGGTACAGAAAACTGTGCTaGAGTGCAGAGAGAGCCACA +
Preference number: 4 (lower is better)
Translates to: VRSLESIVNKMVVLWGHRYRKLC*SAERAT
Trigger: TGTGGCTCTCTCTGCACTTCAGCACAGTTTTCTGTA...CCTGTGGCCCCAAAGGACAACCATCTTGTTAACTATTGATTCCAGTGACCTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531154.5
ENST00000616540.5
CDS-3UTR TCA 90 bp TACAGATACACCAGAAAGCCTCTGAAATCCAACGATGCCATACGGAAGTCTGATAGCTACTCGGGTGGCTaGGGCATGAGAATTGCTTCA +
Preference number: 4 (lower is better)
Translates to: YRYTRKPLKSNDAIRKSDSYSGG*GMRIAS
Trigger: TGAAGCAATTCTCATGCCTCAGCCACCCGAGTAGCT...ATCAGACTTCCGTATGGCATCGTTGGATTTCAGAGGCTTTCTGGTGTATCTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR TCA 90 bp CCATGTATTGTGCTCTCACTAAAGACATACATAGAACAGAGAGATCCAAAATCAGGCGGGTGGATGACCTaGGGTCAGGAGTCCAAGACC +
Preference number: 4 (lower is better)
Translates to: PCIVLSLKTYIEQRDPKSGGWMT*GQESKT
Trigger: GGTCTTGGACTCCTGACCTCAGGTCATCCACCCGCC...TGATTTTGGATCTCTCTGTTCTATGTATGTCTTTAGTGAGAGCACAATACATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR TCA 90 bp GTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAATCAATAGTTAACAAGGGAGAACTGCTACTCTaGGCAGGTGTGTTGAAACTG +
Preference number: 4 (lower is better)
Translates to: VTGDDLQGVRSLESIVNKGELLL*AGVLKL
Trigger: CAGTTTCAACACACCTGCTCAGAGTAGCAGTTCTCC...CTTGTTAACTATTGATTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616540.5
CDS-3UTR TCA 90 bp GCTTTGGTGGAGAAGCCCATATGGCCTAAGAGAGGCTTGCTAGTTCTCAGATGCGATCAGGAAGACAAGTaGATTGGACAATACTCTTGC +
Preference number: 4 (lower is better)
Translates to: ALVEKPIWPKRGLLVLRCDQEDK*IGQYSC
Trigger: GCAAGAGTATTGTCCAATTCACTTGTCTTCCTGATC...GCATCTGAGAACTAGCAAGCCTCTCTTAGGCCATATGGGCTTCTCCACCAAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR TCA 90 bp TCATTCGACTCACGTGCAACCCAAACTTCTTGCACACAGCCTTGTAAAAGTAAATGCCCGCAGCAGCTTTaGAGATCCCAGTCAAGGAGA +
Preference number: 4 (lower is better)
Translates to: SFDSRATQTSCTQPCKSKCPQQL*RSQSRR
Trigger: TCTCCTTGACTGGGATCTTCAAAGCTGCTGCGGGCA...TTTACTTTTACAAGGCTGTGTGCAAGAAGTTTGGGTTGCACGTGAGTCGAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619129.4
CDS-3UTR GCA 90 bp GAACCAAGAAGGCTAGCATCATTCGACTCACGTGCAACCCAAACTTCTTGCACAGGAGCGAATGGCATATaGTGGGGAATATTCCCAAGT +
Preference number: 4 (lower is better)
Translates to: EPRRLASFDSRATQTSCTGANGI*WGIFPS
Trigger: ACTTGGGAATATTCCCCAGCATATGCCATTCGCTCC...TGTGCAAGAAGTTTGGGTTGCACGTGAGTCGAATGATGCTAGCCTTCTTGGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612489.1
ENST00000619129.4
CDS-3UTR GCA 90 bp TGCAATCACCAACTTCCCATAATAGTAGCTGTCAATGACCACCACAGGCACCAGGGAGCGAATGGCATATaGTGGGGAATATTCCCAAGT +
Preference number: 4 (lower is better)
Translates to: CNHQLPIIVAVNDHHRHQGANGI*WGIFPS
Trigger: ACTTGGGAATATTCCCCAGCATATGCCATTCGCTCC...CTGGTGCCTGTGGTGGTCATTGACAGCTACTATTATGGGAAGTTGGTGATTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613181.4
ENST00000618252.1
ENST00000619129.4
CDS-3UTR GCA 90 bp TCACTGGAATCAATAGTTAACAAGATGGTTGTCCTTTGGGGCCACAGGTGTGTTTTACAGGCGATGACTTaGAGGGAGTCAGGTCACTGG +
Preference number: 4 (lower is better)
Translates to: SLESIVNKMVVLWGHRCVLQAMT*RESGHW
Trigger: CCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAA...AACACACCTGTGGCCCCAAAGGACAACCATCTTGTTAACTATTGATTCCAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000398006.6
ENST00000524671.1
ENST00000525910.1
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR GCA 90 bp GTCAGAAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTTTACAGGCGATGACTTaGAGGGAGTCAGGTCACTGG +
Preference number: 4 (lower is better)
Translates to: VRRPLLQMLQAMTCRESGLQAMT*RESGHW
Trigger: CCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAA...ACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTTCTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000398006.6
ENST00000524671.1
ENST00000525910.1
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR GCA 90 bp AATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAATCAATAGTTAACAAAACTGTGCTGAAGTaGAGAGAGAGCCACAGCGCC +
Preference number: 4 (lower is better)
Translates to: NVTGDDLQGVRSLESIVNKTVLK*RESHSA
Trigger: GGCGCTGTGGCTCTCTCTGCACTTCAGCACAGTTTT...GTTAACTATTGATTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531154.5
ENST00000616540.5
CDS-3UTR GCA 90 bp TTGCAGGGAGTCAGGTCACTGGAATCAATAGTTAACAAGATGGTTGTCCTTTGGGCCCCATGCAGGATGTaGCTCACAACAGACAGAACT +
Preference number: 4 (lower is better)
Translates to: LQGVRSLESIVNKMVVLWAPCRM*LTTDRT
Trigger: AGTTCTGTCTGTTGTGAGGCACATCCTGCATGGGGC...CCAAAGGACAACCATCTTGTTAACTATTGATTCCAGTGACCTGACTCCCTGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616540.5
CDS-3UTR GCA 90 bp TTAGGTCACAGTTCCTCAAATGGTCACCTTTTTCCTGAGATAGCTCCAGGACAGACTAGAAGTGCCCCATaGAGGATGTGCCTCACAACA +
Preference number: 4 (lower is better)
Translates to: LGHSSSNGHLFPEIAPGQTRSAP*RMCLTT
Trigger: TGTTGTGAGGCACATCCTGCATGGGGCACTTCTAGT...CTGTCCTGGAGCTATCTCAGGAAAAAGGTGACCATTTGAGGAACTGTGACCTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR GCA 90 bp AATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAATCAATAGTTAACGAAGCACTACTTTCCTaGCACAGGTCAGGCTGCATC +
Preference number: 4 (lower is better)
Translates to: NVTGDDLQGVRSLESIVNEALLS*HRSGCI
Trigger: GATGCAGCCTGACCTGTGGCAGGAAAGTAGTGCTTC...GTTAACTATTGATTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616540.5
CDS-3UTR CCA 90 bp GTCAGGTCACTGGAATCAATAGTTAACAAGATGGTTGTCCTTTGGGGCCACAGGGCGAATGGCATATGCTaGGGAATATTCCCAAGTCTG +
Preference number: 4 (lower is better)
Translates to: VRSLESIVNKMVVLWGHRANGIC*GIFPSL
Trigger: CAGACTTGGGAATATTCCCCAGCATATGCCATTCGC...CCTGTGGCCCCAAAGGACAACCATCTTGTTAACTATTGATTCCAGTGACCTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR CCA 90 bp AAGCCCATATGGCCTAAGAGAGGCTTGCTAGTTCTCAGATGCCAGGCCAGAGTGAATTCGGTAAAATTCTaGATACAAATCAAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: KPIWPKRGLLVLRCQARVNSVKF*IQIKGP
Trigger: GGGCCCCTTGATTTGTATCCAGAATTTTACCGAATT...CACTCTGGCCTGGCATCTGAGAACTAGCAAGCCTCTCTTAGGCCATATGGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR CCA 90 bp GTCAGGTCACTGGAATCAATAGTTAACAAGATGGTTGTCCTTTGGGGCCACAGGGACAGTGTGGATGGTTaGGTCTGTAGCAATTCGGTA +
Preference number: 4 (lower is better)
Translates to: VRSLESIVNKMVVLWGHRDSVDG*VCSNSV
Trigger: TACCGAATTGCTACAGACCCAACCATCCACACTGTC...CCTGTGGCCCCAAAGGACAACCATCTTGTTAACTATTGATTCCAGTGACCTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR CCA 90 bp GTCTTGCTGGAGGTGAAAAGGACATGTGGGTTGGCAACTAGGCTGTGTTCATTTGACAGTGTGGATGGTTaGGTCTGTAGCAATTCGGTA +
Preference number: 4 (lower is better)
Translates to: VLLEVKRTCGLATRLCSFDSVDG*VCSNSV
Trigger: TACCGAATTGCTACAGACCCAACCATCCACACTGTC...AAATGAACACAGCCTAGTTGCCAACCCACATGTCCTTTTCACCTCCAGCAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR CCA 90 bp AAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGCCTTCTGGGACAGTGTaGATGGTTGGGTCTGTAGCA +
Preference number: 4 (lower is better)
Translates to: KTFITNVTGDDLQGVRSLPSGTV*MVGSVA
Trigger: TGCTACAGACCCAACCATCCACACTGTCCCAGAAGG...CAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR CCA 90 bp AGTTTACGTACACTGTATACTGATCTGACAGGAAGGGGACATAGAATGCCCGCAAAGATGGTTGTCCTTTaGGGCCACAGGTGTGTTGCT +
Preference number: 4 (lower is better)
Translates to: SLRTLYTDLTGRGHRMPAKMVVL*GHRCVA
Trigger: AGCAACACACCTGTGGCCCCAAAGGACAACCATCTT...TGCGGGCATTCTATGTCCCCTTCCTGTCAGATCAGTATACAGTGTACGTAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000524671.1
ENST00000525910.1
ENST00000619129.4
CDS-3UTR CCA 90 bp TCCTTTGGGGCCACAGGTGTGTTGCTAACCTCCACTTTTCTTCCTGATTTGCTTCTGCAGCCAGAAAGATaGCCTTTACCAGAACTTGAC +
Preference number: 4 (lower is better)
Translates to: SFGATGVLLTSTFLPDLLLQPER*PLPELD
Trigger: GTCAAGTTCTGGTAAAGGCCATCTTTCTGGCTGCAG...AAGCAAATCAGGAAGAAAAGTGGAGGTTAGCAACACACCTGTGGCCCCAAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524671.1
CDS-3UTR CCA 90 bp TACAGATACACCAGAAAGCCTCTGAAATCCAACGATGCCATACGGAAGTCTGATTGCCAGGCCAGAGTGTaGAGAACAGCTTATCACAGC +
Preference number: 4 (lower is better)
Translates to: YRYTRKPLKSNDAIRKSDCQARV*RTAYHS
Trigger: GCTGTGATAAGCTGTTCTCCACACTCTGGCCTGGCA...ATCAGACTTCCGTATGGCATCGTTGGATTTCAGAGGCTTTCTGGTGTATCTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR CCA 90 bp AATGGTCACCTTTTTCCTGAGATAGCTCCAGGACAGGGTCCTAGTCCTGTGAAGAAAGGACATGTGGGTTaGCAACTAGGCTGTGTTCAT +
Preference number: 4 (lower is better)
Translates to: NGHLFPEIAPGQGPSPVKKGHVG*QLGCVH
Trigger: ATGAACACAGCCTAGTTGCCAACCCACATGTCCTTT...CTTCACAGGACTAGGACCCTGTCCTGGAGCTATCTCAGGAAAAAGGTGACCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR CCA 90 bp GCTTTGGTGGAGAAGCCCATATGGCCTAAGAGAGGCTTGCTAGTTCTCAGATGCAGCTCTATTACTTACTaGCTGTGTGACCTTAGGCAA +
Preference number: 4 (lower is better)
Translates to: ALVEKPIWPKRGLLVLRCSSITY*LCDLRQ
Trigger: TTGCCTAAGGTCACACAGCCAGTAAGTAATAGAGCT...GCATCTGAGAACTAGCAAGCCTCTCTTAGGCCATATGGGCTTCTCCACCAAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR CCA 90 bp GATGACTTGCAGGGAGTCAGGTCACTGGAATCAATAGTTAACAAGATGGTTGTCACAGCACTGCTGTGCTaGTCTAACACACAGGCAGAC +
Preference number: 4 (lower is better)
Translates to: DDLQGVRSLESIVNKMVVTALLC*SNTQAD
Trigger: GTCTGCCTGTGTGTTAGACCAGCACAGCAGTGCTGT...GACAACCATCTTGTTAACTATTGATTCCAGTGACCTGACTCCCTGCAAGTCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616540.5
CDS-3UTR CCA 90 bp TCACTGGAATCAATAGTTAACAAGATGGTTGTCCTTTGGGGCCACAGGTGTGTTAGAATTGCTTCAACCTaGGAGGCAGAGGTTGCAGCG +
Preference number: 4 (lower is better)
Translates to: SLESIVNKMVVLWGHRCVRIAST*EAEVAA
Trigger: CGCTGCAACCTCTGCCTCCCAGGTTGAAGCAATTCT...AACACACCTGTGGCCCCAAAGGACAACCATCTTGTTAACTATTGATTCCAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616540.5
CDS-3UTR CCA 90 bp AGAGGCTTGCTAGTTCTCAGATGCCAGGCCAGAGTGTGGAGAACAGCTTATCACCTTACCTATAACATTTaGCACAGCGTTCTGCCATGT +
Preference number: 4 (lower is better)
Translates to: RGLLVLRCQARVWRTAYHLTYNI*HSVLPC
Trigger: ACATGGCAGAACGCTGTGCCAAATGTTATAGGTAAG...GTGATAAGCTGTTCTCCACACTCTGGCCTGGCATCTGAGAACTAGCAAGCCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR CCA 90 bp GTCAGGCTGCATCACACAGCACTGCTGTGCTGGTCTAACACACAGGCAGACTGGCTAGAACTCCAAAGTTaGAAAAATGACCCAGATAAA +
Preference number: 4 (lower is better)
Translates to: VRLHHTALLCWSNTQADWLELQS*KNDPDK
Trigger: TTTATCTGGGTCATTTTTCCAACTTTGGAGTTCTAG...CCAGTCTGCCTGTGTGTTAGACCAGCACAGCAGTGCTGTGTGATGCAGCCTGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR TCA 90 bp CTCCCAGCACAGCAATGGAAGTCTTGTCCATATACCATCCAGTCATGGCTATCATTGGCTCCCAGTAGTTaGATGTTTCATCACAGTCAG +
Preference number: 4 (lower is better)
Translates to: LPAQQWKSCPYTIQSWLSLAPSS*MFHHSQ
Trigger: CTGACTGTGATGAAACATTCAACTACTGGGAGCCAA...TGATAGCCATGACTGGATGGTATATGGACAAGACTTCCATTGCTGTGCTGGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613181.4
CDS-3UTR TCA 90 bp GTCTTGCTGGAGGTGAAAAGGACATGTGGGTTGGCAACTAGGCTGTGTTCATTTTTGGCTCCCAGTAGTTaGATGTTTCATCACAGTCAG +
Preference number: 4 (lower is better)
Translates to: VLLEVKRTCGLATRLCSFLAPSS*MFHHSQ
Trigger: CTGACTGTGATGAAACATTCAACTACTGGGAGCCAA...AAATGAACACAGCCTAGTTGCCAACCCACATGTCCTTTTCACCTCCAGCAAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616540.5
CDS-3UTR TCA 90 bp GTTCTCATCGTTCAGCTCCCATTTATAAGTGAGAAGATGTGGTGTTTGGTTTTCACCCTTCCCCATAGATaGGGTAGTGTGTTGGCTCCC +
Preference number: 4 (lower is better)
Translates to: VLIVQLPFISEKMWCLVFTLPHR*GSVLAP
Trigger: GGGAGCCAACACACTACCTCATCTATGGGGAAGGGT...GAAAACCAAACACCACATCTTCTCACTTATAAATGGGAGCTGAACGATGAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618252.1
CDS-3UTR TCA 90 bp AAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGCCATCAGCGACCAATaGAAGAAACTCTTCCACCTG +
Preference number: 4 (lower is better)
Translates to: KTFITNVTGDDLQGVRSLAISDQ*KKLFHL
Trigger: CAGGTGGAAGAGTTTCTTTCATTGGTCGCTGATGGC...CAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR TCA 90 bp AGAAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACGCCATCAGCGACCAATaGAAGAAACTCTTCCACCTG +
Preference number: 4 (lower is better)
Translates to: RRPLLQMLQAMTCRESGHAISDQ*KKLFHL
Trigger: CAGGTGGAAGAGTTTCTTTCATTGGTCGCTGATGGC...GTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR TCA 90 bp TCACTGGAATCAATAGTTAACAAGATGGTTGTCCTTTGGGGCCACAGGTGTGTTGCCATCAGCGACCAATaGAAGAAACTCTTCCACCTG +
Preference number: 4 (lower is better)
Translates to: SLESIVNKMVVLWGHRCVAISDQ*KKLFHL
Trigger: CAGGTGGAAGAGTTTCTTTCATTGGTCGCTGATGGC...AACACACCTGTGGCCCCAAAGGACAACCATCTTGTTAACTATTGATTCCAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR TCA 90 bp AATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAATCAATAGTTAACGCCATCAGCGACCAATaGAAGAAACTCTTCCACCTG +
Preference number: 4 (lower is better)
Translates to: NVTGDDLQGVRSLESIVNAISDQ*KKLFHL
Trigger: CAGGTGGAAGAGTTTCTTTCATTGGTCGCTGATGGC...GTTAACTATTGATTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR TCA 90 bp GATGACTTGCAGGGAGTCAGGTCACTGGAATCAATAGTTAACAAGATGGTTGTCGCACCAGAAATAGTATaGGGGCCATCAGCGACCAAT +
Preference number: 4 (lower is better)
Translates to: DDLQGVRSLESIVNKMVVAPEIV*GPSATN
Trigger: ATTGGTCGCTGATGGCCCTCATACTATTTCTGGTGC...GACAACCATCTTGTTAACTATTGATTCCAGTGACCTGACTCCCTGCAAGTCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR TCA 90 bp AAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGCACCAGAAATAGTATaGGGGCCATCAGCGACCAAT +
Preference number: 4 (lower is better)
Translates to: KTFITNVTGDDLQGVRSLAPEIV*GPSATN
Trigger: ATTGGTCGCTGATGGCCCTCATACTATTTCTGGTGC...CAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR TCA 90 bp TATTCCATAAGAGAAGTCAGTGGTAGGACTAGGAGAGCCAAAGCAAAGGCTACAGCACCAGAAATAGTATaGGGGCCATCAGCGACCAAT +
Preference number: 4 (lower is better)
Translates to: YSIREVSGRTRRAKAKATAPEIV*GPSATN
Trigger: ATTGGTCGCTGATGGCCCTCATACTATTTCTGGTGC...TGTAGCCTTTGCTTTGGCTCTCCTAGTCCTACCACTGACTTCTCTTATGGAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613181.4
ENST00000619129.4
CDS-3UTR TCA 90 bp AATGACAAGAGCCCAAACAGGAAGACAGTTCCTAATGCCAGCCAATTCGATGTCAATAGTAGCTGTCAATaGCCACCACAGGCACCAGAA +
Preference number: 4 (lower is better)
Translates to: NDKSPNRKTVPNASQFDVNSSCQ*PPQAPE
Trigger: TTCTGGTGCCTGTGGTGGTCATTGACAGCTACTATT...GACATCGAATTGGCTGGCATTAGGAACTGTCTTCCTGTTTGGGCTCTTGTCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613181.4
ENST00000619129.4
CDS-3UTR TCA 90 bp TTAGGTCACAGTTCCTCAAATGGTCACCTTTTTCCTGAGATAGCTCCAGGACAGCACAGAGCGAGAAAATaGCAAGAGCCCAAACAGGAA +
Preference number: 4 (lower is better)
Translates to: LGHSSSNGHLFPEIAPGQHRARK*QEPKQE
Trigger: TTCCTGTTTGGGCTCTTGTCATTTTCTCGCTCTGTG...CTGTCCTGGAGCTATCTCAGGAAAAAGGTGACCATTTGAGGAACTGTGACCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR TCA 90 bp GTCAGGTCACTGGAATCAATAGTTAACAAGATGGTTGTCCTTTGGGGCCACAGGTCTGATGGAATGAACTaGAGCTGCCAATTGTCAGGA +
Preference number: 4 (lower is better)
Translates to: VRSLESIVNKMVVLWGHRSDGMN*SCQLSG
Trigger: TCCTGACAATTGGCAGCTTCAGTTCATTCCATCAGA...CCTGTGGCCCCAAAGGACAACCATCTTGTTAACTATTGATTCCAGTGACCTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR TCA 90 bp GTCAGAAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTTGCCCGCAGCAGCTTTaGAGATCTAGAAGCATCAAG +
Preference number: 4 (lower is better)
Translates to: VRRPLLQMLQAMTCRESGCPQQL*RSRSIK
Trigger: CTTGATGCTTCTAGATCTTCAAAGCTGCTGCGGGCA...ACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTTCTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
CDS-3UTR TCA 90 bp ACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAATCAATAGTTTGCCCGCAGCAGCTTTaGAGATCTAGAAGCATCAAG +
Preference number: 4 (lower is better)
Translates to: TNVTGDDLQGVRSLESIVCPQQL*RSRSIK
Trigger: CTTGATGCTTCTAGATCTTCAAAGCTGCTGCGGGCA...AACTATTGATTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
CDS-3UTR TCA 90 bp CAGAAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCATGCCCGCAGCAGCTTTaGAGATCTAGAAGCATCAAG +
Preference number: 4 (lower is better)
Translates to: QKTFITNVTGDDLQGVRSCPQQL*RSRSIK
Trigger: CTTGATGCTTCTAGATCTTCAAAGCTGCTGCGGGCA...TGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
CDS-3UTR TCA 90 bp GCCACAGGTGTGTTGCTAACCTCCACTTTTCTTCCTGATTTGCTTTGCTTTCCGCACTGTATACTGATCTaGCAGGAAGGGGACATAGAA +
Preference number: 4 (lower is better)
Translates to: ATGVLLTSTFLPDLLCFPHCILI*QEGDIE
Trigger: TTCTATGTCCCCTTCCTGTCAGATCAGTATACAGTG...CGGAAAGCAAAGCAAATCAGGAAGAAAAGTGGAGGTTAGCAACACACCTGTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000524671.1
ENST00000525910.1
ENST00000619129.4
CDS-3UTR TCA 90 bp GTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAATCAATAGTTAACAAGACGTACACTGTATACTaGTCTGACAGGAAGGGGACA +
Preference number: 4 (lower is better)
Translates to: VTGDDLQGVRSLESIVNKTYTVY*SDRKGT
Trigger: TGTCCCCTTCCTGTCAGATCAGTATACAGTGTACGT...CTTGTTAACTATTGATTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000398006.6
ENST00000524671.1
ENST00000525910.1
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR TCA 90 bp CTGGAATCAATAGTTAACAAGATGGTTGTCCTTTGGGGCCACAGGTGTGTTGCTTTGCTTTCCGGGGTTTaGGGATGGTGTAGTTTACGT +
Preference number: 4 (lower is better)
Translates to: LESIVNKMVVLWGHRCVALLSGV*GWCSLR
Trigger: ACGTAAACTACACCATCCTCAAACCCCGGAAAGCAA...AGCAACACACCTGTGGCCCCAAAGGACAACCATCTTGTTAACTATTGATTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000524671.1
ENST00000525910.1
ENST00000619129.4
CDS-3UTR TCA 90 bp GTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAATCAATAGTTAACAAGTTGCTTTCCGGGGTTTaGGGATGGTGTAGTTTACGT +
Preference number: 4 (lower is better)
Translates to: VTGDDLQGVRSLESIVNKLLSGV*GWCSLR
Trigger: ACGTAAACTACACCATCCTCAAACCCCGGAAAGCAA...CTTGTTAACTATTGATTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000398006.6
ENST00000524671.1
ENST00000525910.1
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR TCA 90 bp AGGTCACTGGAATCAATAGTTAACAAGATGGTTGTCCTTTGGGGCCACAGGTGTCTCCACTTTTCTTCCTaGTTTGCTTTGCTTTCCGGG +
Preference number: 4 (lower is better)
Translates to: RSLESIVNKMVVLWGHRCLHFSS*FALLSG
Trigger: CCCGGAAAGCAAAGCAAATCAGGAAGAAAAGTGGAG...ACACCTGTGGCCCCAAAGGACAACCATCTTGTTAACTATTGATTCCAGTGACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000398006.6
ENST00000524671.1
ENST00000525910.1
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR TCA 90 bp AATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAATCAATAGTTAACAAATGTTACAGGCGATaGCTTGCAGGGAGTCAGGTC +
Preference number: 4 (lower is better)
Translates to: NVTGDDLQGVRSLESIVNKCYRR*LAGSQV
Trigger: GACCTGACTCCCTGCAAGTCATCGCCTGTAACATTT...GTTAACTATTGATTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000398006.6
ENST00000524671.1
ENST00000525910.1
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR TCA 90 bp AGAAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACAAATGTTACAGGCGATaGCTTGCAGGGAGTCAGGTC +
Preference number: 4 (lower is better)
Translates to: RRPLLQMLQAMTCRESGHKCYRR*LAGSQV
Trigger: GACCTGACTCCCTGCAAGTCATCGCCTGTAACATTT...GTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000398006.6
ENST00000524671.1
ENST00000525910.1
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR TCA 90 bp CCACATGTTGTGACTGTGAGGATCAAACGAGATGCTGTGAAAGTGCCTTGTAAAAAATGTTACAGGCGATaGCTTGCAGGGAGTCAGGTC +
Preference number: 4 (lower is better)
Translates to: PHVVTVRIKRDAVKVPCKKCYRR*LAGSQV
Trigger: GACCTGACTCCCTGCAAGTCATCGCCTGTAACATTT...TTTACAAGGCACTTTCACAGCATCTCGTTTGATCCTCACAGTCACAACATGTGG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000616540.5
CDS-3UTR TCA 90 bp ACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAATCAATAGTTAAATGTTACAGGCGATaGCTTGCAGGGAGTCAGGTC +
Preference number: 4 (lower is better)
Translates to: TNVTGDDLQGVRSLESIVKCYRR*LAGSQV
Trigger: GACCTGACTCCCTGCAAGTCATCGCCTGTAACATTT...AACTATTGATTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000398006.6
ENST00000524671.1
ENST00000525910.1
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR TCA 90 bp CAGGCCAGAGTGTGGAGAACAGCTTATCACAGCCATCCAGTACCAGGATTTTCAGCACTGATTAACACGTaGGCTTTAATATGCTTGTGG +
Preference number: 4 (lower is better)
Translates to: QARVWRTAYHSHPVPGFSALINT*ALICLW
Trigger: CCACAAGCATATTAAAGCTCACGTGTTAATCAGTGC...TGAAAATCCTGGTACTGGATGGCTGTGATAAGCTGTTCTCCACACTCTGGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616540.5
CDS-3UTR TCA 90 bp GCTTTGGTGGAGAAGCCCATATGGCCTAAGAGAGGCTTGCTAGTTCTCAGATGCCACTTTACTGCTTCCTaGTTTCATTTGCAGCATGAA +
Preference number: 4 (lower is better)
Translates to: ALVEKPIWPKRGLLVLRCHFTAS*FHLQHE
Trigger: TTCATGCTGCAAATGAAATCAGGAAGCAGTAAAGTG...GCATCTGAGAACTAGCAAGCCTCTCTTAGGCCATATGGGCTTCTCCACCAAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR GCA 90 bp ACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAATCAATAGTTAATGCAGTTCTAACCTaGAGCCTCCAGGGTTTGGGA +
Preference number: 4 (lower is better)
Translates to: TNVTGDDLQGVRSLESIVNAVLT*SLQGLG
Trigger: TCCCAAACCCTGGAGGCTGCAGGTTAGAACTGCATT...AACTATTGATTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398006.6
CDS-3UTR GCA 90 bp AGGTCACTGGAATCAATAGTTAACAAGATGGTTGTCCTTTGGGGCCACAGGTGTAGTAGATCCTTCAGGTaGCCAGACTTGTCCTGCTTT +
Preference number: 4 (lower is better)
Translates to: RSLESIVNKMVVLWGHRCSRSFR*PDLSCF
Trigger: AAAGCAGGACAAGTCTGGGCACCTGAAGGATCTACT...ACACCTGTGGCCCCAAAGGACAACCATCTTGTTAACTATTGATTCCAGTGACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
CDS-3UTR GCA 90 bp AGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGGGAGCGAATGGCATATaGTGGGGAATATTCCCAAGT +
Preference number: 4 (lower is better)
Translates to: RPLLQMLQAMTCRESGHWGANGI*WGIFPS
Trigger: ACTTGGGAATATTCCCCAGCATATGCCATTCGCTCC...CCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR GCA 90 bp CAGGGAGTCAGGTCACTGGAATCAATAGTTAACAAGATGGTTGTCCTTTGGGGCAATTCTTGCATGAAATaGAGCTGGCCAGGCATGAAG +
Preference number: 4 (lower is better)
Translates to: QGVRSLESIVNKMVVLWGNSCMK*SWPGMK
Trigger: CTTCATGCCTGGCCAGCTGCATTTCATGCAAGAATT...GCCCCAAAGGACAACCATCTTGTTAACTATTGATTCCAGTGACCTGACTCCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR GCA 90 bp CTCCCAGCACAGCAATGGAAGTCTTGTCCATATACCATCCAGTCATGGCTATCAAATTCTTGCATGAAATaGAGCTGGCCAGGCATGAAG +
Preference number: 4 (lower is better)
Translates to: LPAQQWKSCPYTIQSWLSNSCMK*SWPGMK
Trigger: CTTCATGCCTGGCCAGCTGCATTTCATGCAAGAATT...TGATAGCCATGACTGGATGGTATATGGACAAGACTTCCATTGCTGTGCTGGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612489.1
ENST00000613181.4
ENST00000619129.4
CDS-3UTR GCA 90 bp TGCAATCACCAACTTCCCATAATAGTAGCTGTCAATGACCACCACAGGCACCAGAATTCTTGCATGAAATaGAGCTGGCCAGGCATGAAG +
Preference number: 4 (lower is better)
Translates to: CNHQLPIIVAVNDHHRHQNSCMK*SWPGMK
Trigger: CTTCATGCCTGGCCAGCTGCATTTCATGCAAGAATT...CTGGTGCCTGTGGTGGTCATTGACAGCTACTATTATGGGAAGTTGGTGATTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613181.4
ENST00000618252.1
ENST00000619129.4
CDS-3UTR GCA 90 bp GAGCAAAACATGCCAGTGCTGAGAACCAAGAAGGCTAGCATCATTCGACTCACGGCAACCCAAACTTCTTaGACACAGCCTTGTAAAAGT +
Preference number: 4 (lower is better)
Translates to: EQNMPVLRTKKASIIRLTATQTS*TQPCKS
Trigger: ACTTTTACAAGGCTGTGTGCAAGAAGTTTGGGTTGC...CGTGAGTCGAATGATGCTAGCCTTCTTGGTTCTCAGCACTGGCATGTTTTGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612489.1
ENST00000619129.4
CDS-3UTR GCA 90 bp GTCAGGTCACTGGAATCAATAGTTAACAAGATGGTTGTCCTTTGGGGCCACAGGATCATTCGACTCACGTaGAACCCAAACTTCTTGCAC +
Preference number: 4 (lower is better)
Translates to: VRSLESIVNKMVVLWGHRIIRLT*NPNFLH
Trigger: GTGCAAGAAGTTTGGGTTGCACGTGAGTCGAATGAT...CCTGTGGCCCCAAAGGACAACCATCTTGTTAACTATTGATTCCAGTGACCTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR GCA 90 bp GTCTTGCTGGAGGTGAAAAGGACATGTGGGTTGGCAACTAGGCTGTGTTCATTTATCATTCGACTCACGTaGAACCCAAACTTCTTGCAC +
Preference number: 4 (lower is better)
Translates to: VLLEVKRTCGLATRLCSFIIRLT*NPNFLH
Trigger: GTGCAAGAAGTTTGGGTTGCACGTGAGTCGAATGAT...AAATGAACACAGCCTAGTTGCCAACCCACATGTCCTTTTCACCTCCAGCAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616540.5
CDS-3UTR GCA 90 bp TTGTCTTCTTGCAGCCATGTGAGGATACAAGTCAGCTGTCTGCAGCCAGAAAGACTTCCTGATTTGCTTTaGTTTCCGGGGTTTGAGGAT +
Preference number: 4 (lower is better)
Translates to: LSSCSHVRIQVSCLQPERLPDLL*FPGFED
Trigger: ATCCTCAAACCCCGGAAAGCAAAGCAAATCAGGAAG...TCTTTCTGGCTGCAGACAGCTGACTTGTATCCTCACATGGCTGCAAGAAGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524671.1
CDS-3UTR GCA 90 bp TTTGGGGCCACAGGTGTGTTGCTAACCTCCACTTTTCTTCCTGATTTGCTTTGCGCTAGCTTGTCTTCTTaGAGCCATGTGAGGATACAA +
Preference number: 4 (lower is better)
Translates to: FGATGVLLTSTFLPDLLCASLSS*SHVRIQ
Trigger: TTGTATCCTCACATGGCTGCAAGAAGACAAGCTAGC...GCAAAGCAAATCAGGAAGAAAAGTGGAGGTTAGCAACACACCTGTGGCCCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524671.1
CDS-3UTR GCA 90 bp AGAAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACCAGAGATTGTGTCACTaGACTCTAGCCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: RRPLLQMLQAMTCRESGHQRLCH*TLAWAT
Trigger: TGTTGCCCAGGCTAGAGTGCAGTGACACAATCTCTG...GTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525910.1
CDS-3UTR GCA 90 bp CATGTCAGAAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAAAAACTGTGCTGAAGTaGAGAGAGAGCCACAGCGCC +
Preference number: 4 (lower is better)
Translates to: HVRRPLLQMLQAMTCRESKTVLK*RESHSA
Trigger: GGCGCTGTGGCTCTCTCTGCACTTCAGCACAGTTTT...TGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTTCTGACATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531154.5
ENST00000616540.5
CDS-3UTR GCA 90 bp AGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGTTTGGCACAGCGTTCTaGCATGTATTGTGCTCTCAC +
Preference number: 4 (lower is better)
Translates to: RPLLQMLQAMTCRESGHWFGTAF*HVLCSH
Trigger: GTGAGAGCACAATACATGGCAGAACGCTGTGCCAAA...CCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616540.5
CDS-3UTR GCA 90 bp TCAGAGAACCATGCATTTGCCAAGTATACCTACTCCCTCACTCACCCCATGATCTTTTTGAGGGAGAACTaGTACTCTGAGCAGGTGTGT +
Preference number: 4 (lower is better)
Translates to: SENHAFAKYTYSLTHPMIFLREN*YSEQVC
Trigger: ACACACCTGCTCAGAGTAGCAGTTCTCCCTCAAAAA...GATCATGGGGTGAGTGAGGGAGTAGGTATACTTGGCAAATGCATGGTTCTCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR GCA 90 bp CGCTTCAACTCCGTCTCTGATATTCCTGCAGAGGAGATCTCAAAGAGGAGCTTTTTTTTGAGGGAGAACTaGTACTCTGAGCAGGTGTGT +
Preference number: 4 (lower is better)
Translates to: RFNSVSDIPAEEISKRSFFLREN*YSEQVC
Trigger: ACACACCTGCTCAGAGTAGCAGTTCTCCCTCAAAAA...AAAGCTCCTCTTTGAGATCTCCTCTGCAGGAATATCAGAGACGGAGTTGAAGCG
47% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR GCA 90 bp AATGGTCACCTTTTTCCTGAGATAGCTCCAGGACAGGGTCCTAGTCCTGTGAAGAGAGAACCATGCATTTaGCAAGTATACCTACTCCCT +
Preference number: 4 (lower is better)
Translates to: NGHLFPEIAPGQGPSPVKREPCI*QVYLLP
Trigger: AGGGAGTAGGTATACTTGGCAAATGCATGGTTCTCT...CTTCACAGGACTAGGACCCTGTCCTGGAGCTATCTCAGGAAAAAGGTGACCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR GCA 90 bp GTCTTGCTGGAGGTGAAAAGGACATGTGGGTTGGCAACTAGGCTGTGTTCATTTAATTTTGGTAGCAGATaGCTACCGTGCAGACTGGTT +
Preference number: 4 (lower is better)
Translates to: VLLEVKRTCGLATRLCSFNFGSR*LPCRLV
Trigger: AACCAGTCTGCACGGTAGGCATCTGCTACCAAAATT...AAATGAACACAGCCTAGTTGCCAACCCACATGTCCTTTTCACCTCCAGCAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR GCA 90 bp TACAGATACACCAGAAAGCCTCTGAAATCCAACGATGCCATACGGAAGTCTGATTTGCCACTGGAGCTTTaGCCAAATGGTCACCGTAGA +
Preference number: 4 (lower is better)
Translates to: YRYTRKPLKSNDAIRKSDLPLEL*PNGHRR
Trigger: TCTACGGTGACCATTTGGGCAAAGCTCCAGTGGCAA...ATCAGACTTCCGTATGGCATCGTTGGATTTCAGAGGCTTTCTGGTGTATCTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR CCA 90 bp GTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAATCAATAGTTAACAAGGCGAATGGCATATGCTaGGGAATATTCCCAAGTCTG +
Preference number: 4 (lower is better)
Translates to: VTGDDLQGVRSLESIVNKANGIC*GIFPSL
Trigger: CAGACTTGGGAATATTCCCCAGCATATGCCATTCGC...CTTGTTAACTATTGATTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR CCA 90 bp AGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGGCGAATGGCATATGCTaGGGAATATTCCCAAGTCTG +
Preference number: 4 (lower is better)
Translates to: RPLLQMLQAMTCRESGHWANGIC*GIFPSL
Trigger: CAGACTTGGGAATATTCCCCAGCATATGCCATTCGC...CCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR CCA 90 bp ATAGCCCCAGCTGCTACTCCCAGCACAGCAATGGAAGTCTTGTCCATATACCATAAGCATAGGAGCGAATaGCATATGCTGGGGAATATT +
Preference number: 4 (lower is better)
Translates to: IAPAATPSTAMEVLSIYHKHRSE*HMLGNI
Trigger: AATATTCCCCAGCATATGCCATTCGCTCCTATGCTT...ATGGTATATGGACAAGACTTCCATTGCTGTGCTGGGAGTAGCAGCTGGGGCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612489.1
ENST00000613181.4
ENST00000619129.4
CDS-3UTR CCA 90 bp GATGACTTGCAGGGAGTCAGGTCACTGGAATCAATAGTTAACAAGATGGTTGTCTGCATGAAATGCAGCTaGCCAGGCATGAAGCAACAG +
Preference number: 4 (lower is better)
Translates to: DDLQGVRSLESIVNKMVVCMKCS*PGMKQQ
Trigger: CTGTTGCTTCATGCCTGGCCAGCTGCATTTCATGCA...GACAACCATCTTGTTAACTATTGATTCCAGTGACCTGACTCCCTGCAAGTCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR CCA 90 bp CAGAAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCATGCATGAAATGCAGCTaGCCAGGCATGAAGCAACAG +
Preference number: 4 (lower is better)
Translates to: QKTFITNVTGDDLQGVRSCMKCS*PGMKQQ
Trigger: CTGTTGCTTCATGCCTGGCCAGCTGCATTTCATGCA...TGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR CCA 90 bp AACTTGAGCCATGGTGGTTTGCTGCACAGATCAACCCATCACCTAGATATTAAGTGCATGAAATGCAGCTaGCCAGGCATGAAGCAACAG +
Preference number: 4 (lower is better)
Translates to: NLSHGGLLHRSTHHLDIKCMKCS*PGMKQQ
Trigger: CTGTTGCTTCATGCCTGGCCAGCTGCATTTCATGCA...CTTAATATCTAGGTGATGGGTTGATCTGTGCAGCAAACCACCATGGCTCAAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618252.1
CDS-3UTR CCA 90 bp CATCATTCGACTCACGTGCAACCCAAACTTCTTGCACACAGCCTTGTAAAAGTATGCATGAAATGCAGCTaGCCAGGCATGAAGCAACAG +
Preference number: 4 (lower is better)
Translates to: HHSTHVQPKLLAHSLVKVCMKCS*PGMKQQ
Trigger: CTGTTGCTTCATGCCTGGCCAGCTGCATTTCATGCA...TACTTTTACAAGGCTGTGTGCAAGAAGTTTGGGTTGCACGTGAGTCGAATGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612489.1
ENST00000619129.4
CDS-3UTR CCA 90 bp AATGGTCACCTTTTTCCTGAGATAGCTCCAGGACAGGGTCCTAGTCCTGTGAAGCAAAACAATGTTGAGTaGTGCAATCACCAACTTCCC +
Preference number: 4 (lower is better)
Translates to: NGHLFPEIAPGQGPSPVKQNNVE*CNHQLP
Trigger: GGGAAGTTGGTGATTGCACCACTCAACATTGTTTTG...CTTCACAGGACTAGGACCCTGTCCTGGAGCTATCTCAGGAAAAAGGTGACCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616540.5
CDS-3UTR CCA 90 bp CCCAGCTGCTACTCCCAGCACAGCAATGGAAGTCTTGTCCATATACCATCCAGTAATTCGGTAAAATTCTaGATACAAATCAAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: PSCYSQHSNGSLVHIPSSNSVKF*IQIKGP
Trigger: GGGCCCCTTGATTTGTATCCAGAATTTTACCGAATT...ACTGGATGGTATATGGACAAGACTTCCATTGCTGTGCTGGGAGTAGCAGCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613181.4
ENST00000619129.4
CDS-3UTR CCA 90 bp AGGTCACTGGAATCAATAGTTAACAAGATGGTTGTCCTTTGGGGCCACAGGTGTGACAGTGTGGATGGTTaGGTCTGTAGCAATTCGGTA +
Preference number: 4 (lower is better)
Translates to: RSLESIVNKMVVLWGHRCDSVDG*VCSNSV
Trigger: TACCGAATTGCTACAGACCCAACCATCCACACTGTC...ACACCTGTGGCCCCAAAGGACAACCATCTTGTTAACTATTGATTCCAGTGACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR CCA 90 bp AATGACAAGAGCCCAAACAGGAAGACAGTTCCTAATGCCAGCCAATTCGATGTCGACAGTGTGGATGGTTaGGTCTGTAGCAATTCGGTA +
Preference number: 4 (lower is better)
Translates to: NDKSPNRKTVPNASQFDVDSVDG*VCSNSV
Trigger: TACCGAATTGCTACAGACCCAACCATCCACACTGTC...GACATCGAATTGGCTGGCATTAGGAACTGTCTTCCTGTTTGGGCTCTTGTCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613181.4
ENST00000619129.4
CDS-3UTR CCA 90 bp TTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAATCACCTTCTGGGACAGTGTaGATGGTTGGGTCTGTAGCA +
Preference number: 4 (lower is better)
Translates to: FITNVTGDDLQGVRSLESPSGTV*MVGSVA
Trigger: TGCTACAGACCCAACCATCCACACTGTCCCAGAAGG...TGATTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR CCA 90 bp TCATGTCAGAAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCCCTTCTGGGACAGTGTaGATGGTTGGGTCTGTAGCA +
Preference number: 4 (lower is better)
Translates to: SCQKTFITNVTGDDLQGVPSGTV*MVGSVA
Trigger: TGCTACAGACCCAACCATCCACACTGTCCCAGAAGG...GACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTTCTGACATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR CCA 90 bp CTTGTCCATATACCATCCAGTCATGGCTATCAACGTAGTGTACATACAGAAGCTCCTTCTGGGACAGTGTaGATGGTTGGGTCTGTAGCA +
Preference number: 4 (lower is better)
Translates to: LVHIPSSHGYQRSVHTEAPSGTV*MVGSVA
Trigger: TGCTACAGACCCAACCATCCACACTGTCCCAGAAGG...AGCTTCTGTATGTACACTACGTTGATAGCCATGACTGGATGGTATATGGACAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619129.4
CDS-3UTR CCA 90 bp AGAAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACAAGATGGTTGTCCTTTaGGGCCACAGGTGTGTTGCT +
Preference number: 4 (lower is better)
Translates to: RRPLLQMLQAMTCRESGHKMVVL*GHRCVA
Trigger: AGCAACACACCTGTGGCCCCAAAGGACAACCATCTT...GTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000398006.6
ENST00000524671.1
ENST00000525910.1
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR CCA 90 bp GTCAGAAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTAAGATGGTTGTCCTTTaGGGCCACAGGTGTGTTGCT +
Preference number: 4 (lower is better)
Translates to: VRRPLLQMLQAMTCRESGKMVVL*GHRCVA
Trigger: AGCAACACACCTGTGGCCCCAAAGGACAACCATCTT...ACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTTCTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000398006.6
ENST00000524671.1
ENST00000525910.1
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR CCA 90 bp CAGAAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCAAAGATGGTTGTCCTTTaGGGCCACAGGTGTGTTGCT +
Preference number: 4 (lower is better)
Translates to: QKTFITNVTGDDLQGVRSKMVVL*GHRCVA
Trigger: AGCAACACACCTGTGGCCCCAAAGGACAACCATCTT...TGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000398006.6
ENST00000524671.1
ENST00000525910.1
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR CCA 90 bp AGAAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTTTGGGAGACTGAGATaGGAGGATGGCTTGAGTCCA +
Preference number: 4 (lower is better)
Translates to: RRPLLQMLQAMTCRESGHFGRLR*EDGLSP
Trigger: TGGACTCAAGCCATCCTCCCATCTCAGTCTCCCAAA...GTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525910.1
CDS-3UTR CCA 90 bp TCAGAGAACCATGCATTTGCCAAGTATACCTACTCCCTCACTCACCCCATGATCATTCTTCCTGTAAGTTaGTTCTGCTCTTCTCCGGTC +
Preference number: 4 (lower is better)
Translates to: SENHAFAKYTYSLTHPMIILPVS*FCSSPV
Trigger: GACCGGAGAAGAGCAGAACCAACTTACAGGAAGAAT...GATCATGGGGTGAGTGAGGGAGTAGGTATACTTGGCAAATGCATGGTTCTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR CCA 90 bp AATGGTCACCTTTTTCCTGAGATAGCTCCAGGACAGGGTCCTAGTCCTGTGAAGAGCTCTATTACTTACTaGCTGTGTGACCTTAGGCAA +
Preference number: 4 (lower is better)
Translates to: NGHLFPEIAPGQGPSPVKSSITY*LCDLRQ
Trigger: TTGCCTAAGGTCACACAGCCAGTAAGTAATAGAGCT...CTTCACAGGACTAGGACCCTGTCCTGGAGCTATCTCAGGAAAAAGGTGACCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR CCA 90 bp TGTCTACCACATGTTGTGACTGTGAGGATCAAACGAGATGCTGTGAAAGTGCCTAACACACAGGCAGACTaGAGGCTCCAAAGAACTCAA +
Preference number: 4 (lower is better)
Translates to: CLPHVVTVRIKRDAVKVPNTQAD*RLQRTQ
Trigger: TTGAGTTCTTTGGAGCCTCCAGTCTGCCTGTGTGTT...AGGCACTTTCACAGCATCTCGTTTGATCCTCACAGTCACAACATGTGGTAGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR TCA 90 bp CAGGGAGTCAGGTCACTGGAATCAATAGTTAACAAGATGGTTGTCCTTTGGGGCCAAGGTCATTGCTTTTaGTGGCTTTATTCATTCCCC +
Preference number: 4 (lower is better)
Translates to: QGVRSLESIVNKMVVLWGQGHCF*WLYSFP
Trigger: GGGGAATGAATAAAGCCATCAAAAGCAATGACCTTG...GCCCCAAAGGACAACCATCTTGTTAACTATTGATTCCAGTGACCTGACTCCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398006.6
ENST00000531154.5
CDS-3UTR TCA 90 bp AGAAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGTAGAATTCTTGCATaGAATGCAGCTGGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: RRPLLQMLQAMTCRESGHCRILA*NAAGQA
Trigger: TGCCTGGCCAGCTGCATTTCATGCAAGAATTCTACA...GTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR TCA 90 bp CAGAAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCATGTAGAATTCTTGCATaGAATGCAGCTGGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: QKTFITNVTGDDLQGVRSCRILA*NAAGQA
Trigger: TGCCTGGCCAGCTGCATTTCATGCAAGAATTCTACA...TGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR TCA 90 bp ACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAATCAATAGTTAAAACATGCCAGTGCTaGGAACCAAGAAGGCTAGCA +
Preference number: 4 (lower is better)
Translates to: TNVTGDDLQGVRSLESIVKTCQC*EPRRLA
Trigger: TGCTAGCCTTCTTGGTTCTCAGCACTGGCATGTTTT...AACTATTGATTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR TCA 90 bp TTGCAGGGAGTCAGGTCACTGGAATCAATAGTTAACAAGATGGTTGTCCTTTGGAAAACATGCCAGTGCTaGGAACCAAGAAGGCTAGCA +
Preference number: 4 (lower is better)
Translates to: LQGVRSLESIVNKMVVLWKTCQC*EPRRLA
Trigger: TGCTAGCCTTCTTGGTTCTCAGCACTGGCATGTTTT...CCAAAGGACAACCATCTTGTTAACTATTGATTCCAGTGACCTGACTCCCTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR TCA 90 bp CATTCGACTCACGTGCAACCCAAACTTCTTGCACACAGCCTTGTAAAAGTAAAGAAAACATGCCAGTGCTaGGAACCAAGAAGGCTAGCA +
Preference number: 4 (lower is better)
Translates to: HSTHVQPKLLAHSLVKVKKTCQC*EPRRLA
Trigger: TGCTAGCCTTCTTGGTTCTCAGCACTGGCATGTTTT...CTTTACTTTTACAAGGCTGTGTGCAAGAAGTTTGGGTTGCACGTGAGTCGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612489.1
ENST00000619129.4
CDS-3UTR TCA 90 bp GTCAGAAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTAAAACATGCCAGTGCTaGGAACCAAGAAGGCTAGCA +
Preference number: 4 (lower is better)
Translates to: VRRPLLQMLQAMTCRESGKTCQC*EPRRLA
Trigger: TGCTAGCCTTCTTGGTTCTCAGCACTGGCATGTTTT...ACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTTCTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR TCA 90 bp GTAAACTTGAGCCATGGTGGTTTGCTGCACAGATCAACCCATCACCTAGATATTAAAACATGCCAGTGCTaGGAACCAAGAAGGCTAGCA +
Preference number: 4 (lower is better)
Translates to: VNLSHGGLLHRSTHHLDIKTCQC*EPRRLA
Trigger: TGCTAGCCTTCTTGGTTCTCAGCACTGGCATGTTTT...AATATCTAGGTGATGGGTTGATCTGTGCAGCAAACCACCATGGCTCAAGTTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618252.1
CDS-3UTR TCA 90 bp AATGACAAGAGCCCAAACAGGAAGACAGTTCCTAATGCCAGCCAATTCGATGTCTCCACCTGTGTTTCATaGCCAGCAAATCAAAGGCAA +
Preference number: 4 (lower is better)
Translates to: NDKSPNRKTVPNASQFDVSTCVS*PANQRQ
Trigger: TTGCCTTTGATTTGCTGGTCATGAAACACAGGTGGA...GACATCGAATTGGCTGGCATTAGGAACTGTCTTCCTGTTTGGGCTCTTGTCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613181.4
ENST00000619129.4
CDS-3UTR TCA 90 bp AGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGTCCACCTGTGTTTCATaGCCAGCAAATCAAAGGCAA +
Preference number: 4 (lower is better)
Translates to: RPLLQMLQAMTCRESGHWSTCVS*PANQRQ
Trigger: TTGCCTTTGATTTGCTGGTCATGAAACACAGGTGGA...CCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR TCA 90 bp AGAAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACAATAGTAGCTGTCAATaGCCACCACAGGCACCAGAA +
Preference number: 4 (lower is better)
Translates to: RRPLLQMLQAMTCRESGHNSSCQ*PPQAPE
Trigger: TTCTGGTGCCTGTGGTGGTCATTGACAGCTACTATT...GTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR TCA 90 bp CAGAAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCAAATAGTAGCTGTCAATaGCCACCACAGGCACCAGAA +
Preference number: 4 (lower is better)
Translates to: QKTFITNVTGDDLQGVRSNSSCQ*PPQAPE
Trigger: TTCTGGTGCCTGTGGTGGTCATTGACAGCTACTATT...TGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR TCA 90 bp GTAAACTTGAGCCATGGTGGTTTGCTGCACAGATCAACCCATCACCTAGATATTAATAGTAGCTGTCAATaGCCACCACAGGCACCAGAA +
Preference number: 4 (lower is better)
Translates to: VNLSHGGLLHRSTHHLDINSSCQ*PPQAPE
Trigger: TTCTGGTGCCTGTGGTGGTCATTGACAGCTACTATT...AATATCTAGGTGATGGGTTGATCTGTGCAGCAAACCACCATGGCTCAAGTTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618252.1
CDS-3UTR TCA 90 bp AATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAATCAATAGTTAACCACAGAGCGAGAAAATaGCAAGAGCCCAAACAGGAA +
Preference number: 4 (lower is better)
Translates to: NVTGDDLQGVRSLESIVNHRARK*QEPKQE
Trigger: TTCCTGTTTGGGCTCTTGTCATTTTCTCGCTCTGTG...GTTAACTATTGATTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR TCA 90 bp TTCCTAATGCCAGCCAATTCGATGTCACAGTATAGTGCTCCAGGCGATATCGTTTCTGATGGAATGAACTaGAGCTGCCAATTGTCAGGA +
Preference number: 4 (lower is better)
Translates to: FLMPANSMSQYSAPGDIVSDGMN*SCQLSG
Trigger: TCCTGACAATTGGCAGCTTCAGTTCATTCCATCAGA...AACGATATCGCCTGGAGCACTATACTGTGACATCGAATTGGCTGGCATTAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619129.4
CDS-3UTR TCA 90 bp ACAAGATGGTTGTCCTTTGGGGCCACAGGTGTGTTGCTAACCTCCACTTTTCTTAAAGGTTTTGGTAACTaGCCTCTGAACTCTGATGGA +
Preference number: 4 (lower is better)
Translates to: TRWLSFGATGVLLTSTFLKGFGN*PLNSDG
Trigger: TCCATCAGAGTTCAGAGGTCAGTTACCAAAACCTTT...AAGAAAAGTGGAGGTTAGCAACACACCTGTGGCCCCAAAGGACAACCATCTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000619129.4
CDS-3UTR TCA 90 bp AGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGCACTGTATACTGATCTaGCAGGAAGGGGACATAGAA +
Preference number: 4 (lower is better)
Translates to: RPLLQMLQAMTCRESGHWHCILI*QEGDIE
Trigger: TTCTATGTCCCCTTCCTGTCAGATCAGTATACAGTG...CCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000398006.6
ENST00000524671.1
ENST00000525910.1
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR TCA 90 bp CAGAAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCAACGTACACTGTATACTaGTCTGACAGGAAGGGGACA +
Preference number: 4 (lower is better)
Translates to: QKTFITNVTGDDLQGVRSTYTVY*SDRKGT
Trigger: TGTCCCCTTCCTGTCAGATCAGTATACAGTGTACGT...TGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000398006.6
ENST00000524671.1
ENST00000525910.1
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR TCA 90 bp AGAAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACACGTACACTGTATACTaGTCTGACAGGAAGGGGACA +
Preference number: 4 (lower is better)
Translates to: RRPLLQMLQAMTCRESGHTYTVY*SDRKGT
Trigger: TGTCCCCTTCCTGTCAGATCAGTATACAGTGTACGT...GTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000398006.6
ENST00000524671.1
ENST00000525910.1
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR TCA 90 bp GGATGGTGTAGTTTACGTACACTGTATACTGATCTGACAGGAAGGGGACATAGAACGTACACTGTATACTaGTCTGACAGGAAGGGGACA +
Preference number: 4 (lower is better)
Translates to: GWCSLRTLYTDLTGRGHRTYTVY*SDRKGT
Trigger: TGTCCCCTTCCTGTCAGATCAGTATACAGTGTACGT...TCTATGTCCCCTTCCTGTCAGATCAGTATACAGTGTACGTAAACTACACCATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000524671.1
ENST00000525910.1
ENST00000619129.4
CDS-3UTR TCA 90 bp ACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAAACGTACACTGTATACTaGTCTGACAGGAAGGGGACA +
Preference number: 4 (lower is better)
Translates to: TFITNVTGDDLQGVRSLETYTVY*SDRKGT
Trigger: TGTCCCCTTCCTGTCAGATCAGTATACAGTGTACGT...TTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000398006.6
ENST00000524671.1
ENST00000525910.1
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR TCA 90 bp AAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGTTGCTTTCCGGGGTTTaGGGATGGTGTAGTTTACGT +
Preference number: 4 (lower is better)
Translates to: KTFITNVTGDDLQGVRSLLLSGV*GWCSLR
Trigger: ACGTAAACTACACCATCCTCAAACCCCGGAAAGCAA...CAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000398006.6
ENST00000524671.1
ENST00000525910.1
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR TCA 90 bp GATGACTTGCAGGGAGTCAGGTCACTGGAATCAATAGTTAACAAGATGGTTGTCTTGCTTTCCGGGGTTTaGGGATGGTGTAGTTTACGT +
Preference number: 4 (lower is better)
Translates to: DDLQGVRSLESIVNKMVVLLSGV*GWCSLR
Trigger: ACGTAAACTACACCATCCTCAAACCCCGGAAAGCAA...GACAACCATCTTGTTAACTATTGATTCCAGTGACCTGACTCCCTGCAAGTCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000398006.6
ENST00000524671.1
ENST00000525910.1
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR TCA 90 bp GTCAGAAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTTTGCTTTCCGGGGTTTaGGGATGGTGTAGTTTACGT +
Preference number: 4 (lower is better)
Translates to: VRRPLLQMLQAMTCRESGLLSGV*GWCSLR
Trigger: ACGTAAACTACACCATCCTCAAACCCCGGAAAGCAA...ACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTTCTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000398006.6
ENST00000524671.1
ENST00000525910.1
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR TCA 90 bp CAGAAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCATTGCTTTCCGGGGTTTaGGGATGGTGTAGTTTACGT +
Preference number: 4 (lower is better)
Translates to: QKTFITNVTGDDLQGVRSLLSGV*GWCSLR
Trigger: ACGTAAACTACACCATCCTCAAACCCCGGAAAGCAA...TGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000398006.6
ENST00000524671.1
ENST00000525910.1
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR TCA 90 bp GTCAGAAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCTCCACTTTTCTTCCTaGTTTGCTTTGCTTTCCGGG +
Preference number: 4 (lower is better)
Translates to: VRRPLLQMLQAMTCRESGLHFSS*FALLSG
Trigger: CCCGGAAAGCAAAGCAAATCAGGAAGAAAAGTGGAG...ACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTTCTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000398006.6
ENST00000524671.1
ENST00000525910.1
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR TCA 90 bp CGCTTCAACTCCGTCTCTGATATTCCTGCAGAGGAGATCTCAAAGAGGAGCTTTAAGTGCCTTGTAAACTaGAGTACTGACTGTAAAGGC +
Preference number: 4 (lower is better)
Translates to: RFNSVSDIPAEEISKRSFKCLVN*STDCKG
Trigger: GCCTTTACAGTCAGTACTTCAGTTTACAAGGCACTT...AAAGCTCCTCTTTGAGATCTCCTCTGCAGGAATATCAGAGACGGAGTTGAAGCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR TCA 90 bp CGCTTCAACTCCGTCTCTGATATTCCTGCAGAGGAGATCTCAAAGAGGAGCTTTCCCTCACTCACCCCATaGTCAAAGGCTATTAAAAAT +
Preference number: 4 (lower is better)
Translates to: RFNSVSDIPAEEISKRSFPSLTP*SKAIKN
Trigger: ATTTTTAATAGCCTTTGATCATGGGGTGAGTGAGGG...AAAGCTCCTCTTTGAGATCTCCTCTGCAGGAATATCAGAGACGGAGTTGAAGCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR TCA 90 bp ACTGCTACTCTGAGCAGGTGTGTTGAAACTGTTTTTCCCAGGCAAAGCTATCCTTTCTTTCTTATCAGATaGCACCTACCAGGTAGGAGG +
Preference number: 4 (lower is better)
Translates to: TATLSRCVETVFPRQSYPFFLIR*HLPGRR
Trigger: CCTCCTACCTGGTAGGTGTCATCTGATAAGAAAGAA...AGGATAGCTTTGCCTGGGAAAAACAGTTTCAACACACCTGCTCAGAGTAGCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR TCA 90 bp ATCTTTCAAGCAAGGGGGAGCCCAGTCTATCCTCACACACTCCCCAGTTATTGTGTAAACACCGACACGTaGAATAAAGTACAAGGATCA +
Preference number: 4 (lower is better)
Translates to: IFQARGSPVYPHTLPSYCVNTDT*NKVQGS
Trigger: TGATCCTTGTACTTTATTTCACGTGTCGGTGTTTAC...ACAATAACTGGGGAGTGTGTGAGGATAGACTGGGCTCCCCCTTGCTTGAAAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR GCA 90 bp CCAGTCATGGCTATCAACGTAGTGTACATACAGAAGCTACTAGGAAGGAATGCTAGTAGATCCTTCAGGTaGCCAGACTTGTCCTGCTTT +
Preference number: 4 (lower is better)
Translates to: PVMAINVVYIQKLLGRNASRSFR*PDLSCF
Trigger: AAAGCAGGACAAGTCTGGGCACCTGAAGGATCTACT...AGCATTCCTTCCTAGTAGCTTCTGTATGTACACTACGTTGATAGCCATGACTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612489.1
CDS-3UTR GCA 90 bp TCGATGTCACAGTATAGTGCTCCAGGCGATATCGTTGAAACACAAAGTGGTAACGGAGCGAATGGCATATaGTGGGGAATATTCCCAAGT +
Preference number: 4 (lower is better)
Translates to: SMSQYSAPGDIVETQSGNGANGI*WGIFPS
Trigger: ACTTGGGAATATTCCCCAGCATATGCCATTCGCTCC...GTTACCACTTTGTGTTTCAACGATATCGCCTGGAGCACTATACTGTGACATCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613181.4
ENST00000619129.4
CDS-3UTR GCA 90 bp AAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGGAGCGAATGGCATATaGTGGGGAATATTCCCAAGT +
Preference number: 4 (lower is better)
Translates to: KTFITNVTGDDLQGVRSLGANGI*WGIFPS
Trigger: ACTTGGGAATATTCCCCAGCATATGCCATTCGCTCC...CAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR GCA 90 bp GTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAATCAATAGTTAACAAGAATTCTTGCATGAAATaGAGCTGGCCAGGCATGAAG +
Preference number: 4 (lower is better)
Translates to: VTGDDLQGVRSLESIVNKNSCMK*SWPGMK
Trigger: CTTCATGCCTGGCCAGCTGCATTTCATGCAAGAATT...CTTGTTAACTATTGATTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR GCA 90 bp CTAGCATCATTCGACTCACGTGCAACCCAAACTTCTTGCACACAGCCTTGTAAAATCATTCGACTCACGTaGAACCCAAACTTCTTGCAC +
Preference number: 4 (lower is better)
Translates to: LASFDSRATQTSCTQPCKIIRLT*NPNFLH
Trigger: GTGCAAGAAGTTTGGGTTGCACGTGAGTCGAATGAT...TTTACAAGGCTGTGTGCAAGAAGTTTGGGTTGCACGTGAGTCGAATGATGCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612489.1
ENST00000619129.4
CDS-3UTR GCA 90 bp ACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAATCAATAGTTTACAAGTCAGCTGTCTaGAGCCAGAAAGATGGCCTT +
Preference number: 4 (lower is better)
Translates to: TNVTGDDLQGVRSLESIVYKSAV*SQKDGL
Trigger: AAGGCCATCTTTCTGGCTGCAGACAGCTGACTTGTA...AACTATTGATTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524671.1
CDS-3UTR GCA 90 bp TGTCTACCACATGTTGTGACTGTGAGGATCAAACGAGATGCTGTGAAAGTGCCTAAGCAGAACAGTCAGTaGAGGCTGAACACTGCTTTT +
Preference number: 4 (lower is better)
Translates to: CLPHVVTVRIKRDAVKVPKQNSQ*RLNTAF
Trigger: AAAAGCAGTGTTCAGCCTGCACTGACTGTTCTGCTT...AGGCACTTTCACAGCATCTCGTTTGATCCTCACAGTCACAACATGTGGTAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR GCA 90 bp ATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAATCAATACAAAAATTAGCTGAGTaGGGTGGTGGTGTGTGCCTG +
Preference number: 4 (lower is better)
Translates to: ITNVTGDDLQGVRSLESIQKLAE*GGGVCL
Trigger: CAGGCACACACCACCACCGCACTCAGCTAATTTTTG...TATTGATTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616540.5
CDS-3UTR GCA 90 bp CCCAGCACAGCAATGGAAGTCTTGTCCATATACCATCCAGTCATGGCTATCAACGCAACCCAAACTTCTTaGACACAGCCCTTATTAGTT +
Preference number: 4 (lower is better)
Translates to: PSTAMEVLSIYHPVMAINATQTS*TQPLLV
Trigger: AACTAATAAGGGCTGTGTGCAAGAAGTTTGGGTTGC...GTTGATAGCCATGACTGGATGGTATATGGACAAGACTTCCATTGCTGTGCTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613181.4
CDS-3UTR CCA 90 bp AGCTGCTACTCCCAGCACAGCAATGGAAGTCTTGTCCATATACCATCCAGTCATCAAAACAATGTTGAGTaGTGCAATCACCAACTTCCC +
Preference number: 4 (lower is better)
Translates to: SCYSQHSNGSLVHIPSSHQNNVE*CNHQLP
Trigger: GGGAAGTTGGTGATTGCACCACTCAACATTGTTTTG...ATGACTGGATGGTATATGGACAAGACTTCCATTGCTGTGCTGGGAGTAGCAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613181.4
ENST00000619129.4
CDS-3UTR CCA 90 bp TATTCATGTCAGAAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGACACAGGTCTGCCTTCTaGGACAGTGTGGATGGTTGG +
Preference number: 4 (lower is better)
Translates to: YSCQKTFITNVTGDDLQGHRSAF*DSVDGW
Trigger: CCAACCATCCACACTGTCCCAGAAGGCAGACCTGTG...TCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTTCTGACATGAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR CCA 90 bp GTCAGGTCACTGGAATCAATAGTTAACAAGATGGTTGTCCTTTGGGGCCACAGGGGGGTGTTTCTCTCATaGTGTCCAAATCCACTAAAT +
Preference number: 4 (lower is better)
Translates to: VRSLESIVNKMVVLWGHRGVFLS*CPNPLN
Trigger: ATTTAGTGGATTTGGACACCATGAGAGAAACACCCC...CCTGTGGCCCCAAAGGACAACCATCTTGTTAACTATTGATTCCAGTGACCTGAC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR CCA 90 bp GTCTTGCTGGAGGTGAAAAGGACATGTGGGTTGGCAACTAGGCTGTGTTCATTTGGGGTGTTTCTCTCATaGTGTCCAAATCCACTAAAT +
Preference number: 4 (lower is better)
Translates to: VLLEVKRTCGLATRLCSFGVFLS*CPNPLN
Trigger: ATTTAGTGGATTTGGACACCATGAGAGAAACACCCC...AAATGAACACAGCCTAGTTGCCAACCCACATGTCCTTTTCACCTCCAGCAAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR CCA 90 bp GTCAGGTCACTGGAATCAATAGTTAACAAGATGGTTGTCCTTTGGGGCCACAGGAGAAGCATCAAGGAATaGTCTATAGGCCAAGCTGAT +
Preference number: 4 (lower is better)
Translates to: VRSLESIVNKMVVLWGHRRSIKE*SIGQAD
Trigger: ATCAGCTTGGCCTATAGACCATTCCTTGATGCTTCT...CCTGTGGCCCCAAAGGACAACCATCTTGTTAACTATTGATTCCAGTGACCTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000398006.6
ENST00000524671.1
ENST00000525910.1
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR CCA 90 bp TTGTCTTCTTGCAGCCATGTGAGGATACAAGTCAGCTGTCTGCAGCCAGAAAGAAGAAGCATCAAGGAATaGTCTATAGGCCAAGCTGAT +
Preference number: 4 (lower is better)
Translates to: LSSCSHVRIQVSCLQPERRSIKE*SIGQAD
Trigger: ATCAGCTTGGCCTATAGACCATTCCTTGATGCTTCT...TCTTTCTGGCTGCAGACAGCTGACTTGTATCCTCACATGGCTGCAAGAAGACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524671.1
CDS-3UTR CCA 90 bp GATGACTTGCAGGGAGTCAGGTCACTGGAATCAATAGTTAACAAGATGGTTGTCCTATGTGATGGTATTTaGAGGTGGGCCTTTGGAAGG +
Preference number: 4 (lower is better)
Translates to: DDLQGVRSLESIVNKMVVLCDGI*RWAFGR
Trigger: CCTTCCAAAGGCCCACCTCCAAATACCATCACATAG...GACAACCATCTTGTTAACTATTGATTCCAGTGACCTGACTCCCTGCAAGTCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524671.1
CDS-3UTR CCA 90 bp TTGCAGGGAGTCAGGTCACTGGAATCAATAGTTAACAAGATGGTTGTCCTTTGGAACACACAGGCAGACTaGAGGCTCCAAAGAACTCAA +
Preference number: 4 (lower is better)
Translates to: LQGVRSLESIVNKMVVLWNTQAD*RLQRTQ
Trigger: TTGAGTTCTTTGGAGCCTCCAGTCTGCCTGTGTGTT...CCAAAGGACAACCATCTTGTTAACTATTGATTCCAGTGACCTGACTCCCTGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616540.5
CDS-3UTR CCA 90 bp TACAGATACACCAGAAAGCCTCTGAAATCCAACGATGCCATACGGAAGTCTGATTCCCTGCATCAGTCCTaGCCTTTCTTTGCGCTATAT +
Preference number: 4 (lower is better)
Translates to: YRYTRKPLKSNDAIRKSDSLHQS*PFFALY
Trigger: ATATAGCGCAAAGAAAGGCCAGGACTGATGCAGGGA...ATCAGACTTCCGTATGGCATCGTTGGATTTCAGAGGCTTTCTGGTGTATCTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
3UTR CAA 72 bp ACAGGTGTGTTGCTAACCTCCACTTTTCTTCCTGATTaGCTTTGCTTTCCGGGGTTTGAGGATGGTGTAGTT +
Preference number: 4 (lower is better)
Translates to: TGVLLTSTFLPD*LCFPGFEDGVV
Trigger: AACTACACCATCCTCAAACCCCGGAAAGCAAAGCAAATCAGGAAGAAAAGTGGAGGTTAGCAACACACCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000524671.1
ENST00000525910.1
ENST00000619129.4
CDS-3UTR TCA 90 bp AAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGTGTTCCCAGATAACTTaGAGGCCACAAAGCTGTCAT +
Preference number: 4 (lower is better)
Translates to: KTFITNVTGDDLQGVRSLCSQIT*RPQSCH
Trigger: ATGACAGCTTTGTGGCCTTCAAGTTATCTGGGAACA...CAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398006.6
ENST00000531154.5
CDS-3UTR TCA 90 bp ACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAATGTTCCCAGATAACTTaGAGGCCACAAAGCTGTCAT +
Preference number: 4 (lower is better)
Translates to: TFITNVTGDDLQGVRSLECSQIT*RPQSCH
Trigger: ATGACAGCTTTGTGGCCTTCAAGTTATCTGGGAACA...TTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398006.6
ENST00000531154.5
CDS-3UTR TCA 90 bp TTGCAGGGAGTCAGGTCACTGGAATCAATAGTTAACAAGATGGTTGTCCTTTGGTTGGCTCCCAGTAGTTaGATGTTTCATCACAGTCAG +
Preference number: 4 (lower is better)
Translates to: LQGVRSLESIVNKMVVLWLAPSS*MFHHSQ
Trigger: CTGACTGTGATGAAACATTCAACTACTGGGAGCCAA...CCAAAGGACAACCATCTTGTTAACTATTGATTCCAGTGACCTGACTCCCTGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
CDS-3UTR TCA 90 bp ACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAATTGGCTCCCAGTAGTTaGATGTTTCATCACAGTCAG +
Preference number: 4 (lower is better)
Translates to: TFITNVTGDDLQGVRSLELAPSS*MFHHSQ
Trigger: CTGACTGTGATGAAACATTCAACTACTGGGAGCCAA...TTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
CDS-3UTR TCA 90 bp AGAAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTTGGCTCCCAGTAGTTaGATGTTTCATCACAGTCAG +
Preference number: 4 (lower is better)
Translates to: RRPLLQMLQAMTCRESGHLAPSS*MFHHSQ
Trigger: CTGACTGTGATGAAACATTCAACTACTGGGAGCCAA...GTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
CDS-3UTR TCA 90 bp GTAAACTTGAGCCATGGTGGTTTGCTGCACAGATCAACCCATCACCTAGATATTTTGGCTCCCAGTAGTTaGATGTTTCATCACAGTCAG +
Preference number: 4 (lower is better)
Translates to: VNLSHGGLLHRSTHHLDILAPSS*MFHHSQ
Trigger: CTGACTGTGATGAAACATTCAACTACTGGGAGCCAA...AATATCTAGGTGATGGGTTGATCTGTGCAGCAAACCACCATGGCTCAAGTTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618252.1
CDS-3UTR TCA 90 bp ATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAATCAATATGTAGAATTCTTGCATaGAATGCAGCTGGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: ITNVTGDDLQGVRSLESICRILA*NAAGQA
Trigger: TGCCTGGCCAGCTGCATTTCATGCAAGAATTCTACA...TATTGATTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR TCA 90 bp TTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAATCAATGTAGAATTCTTGCATaGAATGCAGCTGGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: LLQMLQAMTCRESGHWNQCRILA*NAAGQA
Trigger: TGCCTGGCCAGCTGCATTTCATGCAAGAATTCTACA...TTGATTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR TCA 90 bp TGGTGTAGTTTACGTACACTGTATACTGATCTGACAGGAAGGGGACATAGAATGTGTAGAATTCTTGCATaGAATGCAGCTGGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: WCSLRTLYTDLTGRGHRMCRILA*NAAGQA
Trigger: TGCCTGGCCAGCTGCATTTCATGCAAGAATTCTACA...CATTCTATGTCCCCTTCCTGTCAGATCAGTATACAGTGTACGTAAACTACACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619129.4
CDS-3UTR TCA 90 bp GTCAGAAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTTCCACCTGTGTTTCATaGCCAGCAAATCAAAGGCAA +
Preference number: 4 (lower is better)
Translates to: VRRPLLQMLQAMTCRESGSTCVS*PANQRQ
Trigger: TTGCCTTTGATTTGCTGGTCATGAAACACAGGTGGA...ACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTTCTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR TCA 90 bp TCACTGGAATCAATAGTTAACAAGATGGTTGTCCTTTGGGGCCACAGGTGTGTTTCCACCTGTGTTTCATaGCCAGCAAATCAAAGGCAA +
Preference number: 4 (lower is better)
Translates to: SLESIVNKMVVLWGHRCVSTCVS*PANQRQ
Trigger: TTGCCTTTGATTTGCTGGTCATGAAACACAGGTGGA...AACACACCTGTGGCCCCAAAGGACAACCATCTTGTTAACTATTGATTCCAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR TCA 90 bp AATCACCAACTTCCCATAATAGTAGCTGTCAATGACCACCACAGGCACCAGAAATCCACCTGTGTTTCATaGCCAGCAAATCAAAGGCAA +
Preference number: 4 (lower is better)
Translates to: NHQLPIIVAVNDHHRHQKSTCVS*PANQRQ
Trigger: TTGCCTTTGATTTGCTGGTCATGAAACACAGGTGGA...TTTCTGGTGCCTGTGGTGGTCATTGACAGCTACTATTATGGGAAGTTGGTGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613181.4
ENST00000618252.1
ENST00000619129.4
CDS-3UTR TCA 90 bp GCTGCTACTCCCAGCACAGCAATGGAAGTCTTGTCCATATACCATCCAGTCATGTATACAAAACAATGTTaGGTGGTGCAATCACCAACT +
Preference number: 4 (lower is better)
Translates to: AATPSTAMEVLSIYHPVMYTKQC*VVQSPT
Trigger: AGTTGGTGATTGCACCACTCAACATTGTTTTGTATA...CATGACTGGATGGTATATGGACAAGACTTCCATTGCTGTGCTGGGAGTAGCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613181.4
ENST00000619129.4
CDS-3UTR TCA 90 bp TGCCAATTGTCAGGAAGAAGGAAGCTGCTGGGAAATCGATACCACTCTTTTCCCAATCTCTCCTCTTTGTaGGGCTGGATGAAGAAAATT +
Preference number: 4 (lower is better)
Translates to: CQLSGRRKLLGNRYHSFPNLSSL*GWMKKI
Trigger: AATTTTCTTCATCCAGCCTCACAAAGAGGAGAGATT...GGGAAAAGAGTGGTATCGATTTCCCAGCAGCTTCCTTCTTCCTGACAATTGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619129.4
CDS-3UTR TCA 90 bp CATGTCAGAAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCACACAGAGCGAGAAAATaGCAAGAGCCCAAACAGGAA +
Preference number: 4 (lower is better)
Translates to: HVRRPLLQMLQAMTCRESHRARK*QEPKQE
Trigger: TTCCTGTTTGGGCTCTTGTCATTTTCTCGCTCTGTG...TGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTTCTGACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR TCA 90 bp TTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAATCACACAGAGCGAGAAAATaGCAAGAGCCCAAACAGGAA +
Preference number: 4 (lower is better)
Translates to: FITNVTGDDLQGVRSLESHRARK*QEPKQE
Trigger: TTCCTGTTTGGGCTCTTGTCATTTTCTCGCTCTGTG...TGATTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR TCA 90 bp ACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAATCTGATGGAATGAACTaGAGCTGCCAATTGTCAGGA +
Preference number: 4 (lower is better)
Translates to: TFITNVTGDDLQGVRSLESDGMN*SCQLSG
Trigger: TCCTGACAATTGGCAGCTTCAGTTCATTCCATCAGA...TTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR TCA 90 bp CAGAAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACACTGTATACTGATCTaGCAGGAAGGGGACATAGAA +
Preference number: 4 (lower is better)
Translates to: QKTFITNVTGDDLQGVRSHCILI*QEGDIE
Trigger: TTCTATGTCCCCTTCCTGTCAGATCAGTATACAGTG...TGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000398006.6
ENST00000524671.1
ENST00000525910.1
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR TCA 90 bp AGAAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACCACTGTATACTGATCTaGCAGGAAGGGGACATAGAA +
Preference number: 4 (lower is better)
Translates to: RRPLLQMLQAMTCRESGHHCILI*QEGDIE
Trigger: TTCTATGTCCCCTTCCTGTCAGATCAGTATACAGTG...GTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000398006.6
ENST00000524671.1
ENST00000525910.1
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR TCA 90 bp CTTGTCCATATACCATCCAGTCATGGCTATCAACGTAGTGTACATACAGAAGCTACGTACACTGTATACTaGTCTGACAGGAAGGGGACA +
Preference number: 4 (lower is better)
Translates to: LVHIPSSHGYQRSVHTEATYTVY*SDRKGT
Trigger: TGTCCCCTTCCTGTCAGATCAGTATACAGTGTACGT...AGCTTCTGTATGTACACTACGTTGATAGCCATGACTGGATGGTATATGGACAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619129.4
CDS-3UTR TCA 90 bp TTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAATCAATTGCTTTCCGGGGTTTaGGGATGGTGTAGTTTACGT +
Preference number: 4 (lower is better)
Translates to: LLQMLQAMTCRESGHWNQLLSGV*GWCSLR
Trigger: ACGTAAACTACACCATCCTCAAACCCCGGAAAGCAA...TTGATTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000398006.6
ENST00000524671.1
ENST00000525910.1
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR TCA 90 bp TTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAATCACTCCACTTTTCTTCCTaGTTTGCTTTGCTTTCCGGG +
Preference number: 4 (lower is better)
Translates to: FITNVTGDDLQGVRSLESLHFSS*FALLSG
Trigger: CCCGGAAAGCAAAGCAAATCAGGAAGAAAAGTGGAG...TGATTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000398006.6
ENST00000524671.1
ENST00000525910.1
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR TCA 90 bp TTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAATCATACAGAAAACTGTGCTaGAGTGCAGAGAGAGCCACA +
Preference number: 4 (lower is better)
Translates to: FITNVTGDDLQGVRSLESYRKLC*SAERAT
Trigger: TGTGGCTCTCTCTGCACTTCAGCACAGTTTTCTGTA...TGATTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531154.5
ENST00000616540.5
CDS-3UTR TCA 90 bp ATACCATCCAGTCATGGCTATCAACGTAGTGTACATACAGAAGCTACTAGGAAGCTGGCTCCCAGTAGTTaGATGTTTCATCACAGTCAG +
Preference number: 4 (lower is better)
Translates to: IPSSHGYQRSVHTEATRKLAPSS*MFHHSQ
Trigger: CTGACTGTGATGAAACATTCAACTACTGGGAGCCAG...CTTCCTAGTAGCTTCTGTATGTACACTACGTTGATAGCCATGACTGGATGGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612489.1
CDS-3UTR TCA 90 bp AGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGTTATCATTGCCTATTTaGCTAGAAGTGCCCCATGCA +
Preference number: 4 (lower is better)
Translates to: RPLLQMLQAMTCRESGHWLSLPI*LEVPHA
Trigger: TGCATGGGGCACTTCTAGTCAAATAGGCAATGATAA...CCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616540.5
CDS-3UTR TCA 90 bp AGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGGTTTTCATGGTTGAGTaGGGAATATGGAGGAGCAAT +
Preference number: 4 (lower is better)
Translates to: RPLLQMLQAMTCRESGHWVFMVE*GIWRSN
Trigger: ATTGCTCCTCCATATTCCTCACTCAACCATGAAAAC...CCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616540.5
CDS-3UTR TCA 90 bp TATTCATGTCAGAAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAAGCTACTCGGGTGGCTaGGGCATGAGAATTGCTTCA +
Preference number: 4 (lower is better)
Translates to: YSCQKTFITNVTGDDLQGSYSGG*GMRIAS
Trigger: TGAAGCAATTCTCATGCCTCAGCCACCCGAGTAGCT...TCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTTCTGACATGAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616540.5
CDS-3UTR TCA 90 bp AAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGAATACAAAAATTAGCTaGGTGCGGTGGTGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: KTFITNVTGDDLQGVRSLNTKIS*VRWWCV
Trigger: CACACACCACCACCGCACTCAGCTAATTTTTGTATT...CAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616540.5
CDS-3UTR TCA 90 bp TGTCTACCACATGTTGTGACTGTGAGGATCAAACGAGATGCTGTGAAAGTGCCTGCACTGATTAACACGTaGGCTTTAATATGCTTGTGG +
Preference number: 4 (lower is better)
Translates to: CLPHVVTVRIKRDAVKVPALINT*ALICLW
Trigger: CCACAAGCATATTAAAGCTCACGTGTTAATCAGTGC...AGGCACTTTCACAGCATCTCGTTTGATCCTCACAGTCACAACATGTGGTAGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR GCA 90 bp TTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAATCAAGTAGATCCTTCAGGTaGCCAGACTTGTCCTGCTTT +
Preference number: 4 (lower is better)
Translates to: FITNVTGDDLQGVRSLESSRSFR*PDLSCF
Trigger: AAAGCAGGACAAGTCTGGGCACCTGAAGGATCTACT...TGATTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
CDS-3UTR GCA 90 bp CATGTCAGAAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGAGCGAATGGCATATaGTGGGGAATATTCCCAAGT +
Preference number: 4 (lower is better)
Translates to: HVRRPLLQMLQAMTCRESGANGI*WGIFPS
Trigger: ACTTGGGAATATTCCCCAGCATATGCCATTCGCTCC...TGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTTCTGACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR GCA 90 bp CCACATGTTGTGACTGTGAGGATCAAACGAGATGCTGTGAAAGTGCCTTGTAAAAATTCTTGCATGAAATaGAGCTGGCCAGGCATGAAG +
Preference number: 4 (lower is better)
Translates to: PHVVTVRIKRDAVKVPCKNSCMK*SWPGMK
Trigger: CTTCATGCCTGGCCAGCTGCATTTCATGCAAGAATT...TTTACAAGGCACTTTCACAGCATCTCGTTTGATCCTCACAGTCACAACATGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616540.5
CDS-3UTR GCA 90 bp TTAGGTCACAGTTCCTCAAATGGTCACCTTTTTCCTGAGATAGCTCCAGGACAGGCAACCCAAACTTCTTaGACACAGCCTTGTAAAAGT +
Preference number: 4 (lower is better)
Translates to: LGHSSSNGHLFPEIAPGQATQTS*TQPCKS
Trigger: ACTTTTACAAGGCTGTGTGCAAGAAGTTTGGGTTGC...CTGTCCTGGAGCTATCTCAGGAAAAAGGTGACCATTTGAGGAACTGTGACCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616540.5
CDS-3UTR GCA 90 bp AATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAATCAATAGTTAACATCATTCGACTCACGTaGAACCCAAACTTCTTGCAC +
Preference number: 4 (lower is better)
Translates to: NVTGDDLQGVRSLESIVNIIRLT*NPNFLH
Trigger: GTGCAAGAAGTTTGGGTTGCACGTGAGTCGAATGAT...GTTAACTATTGATTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR GCA 90 bp TCGATGTCACAGTATAGTGCTCCAGGCGATATCGTTGAAACACAAAGTGGTAACATCATTCGACTCACGTaGAACCCAAACTTCTTGCAC +
Preference number: 4 (lower is better)
Translates to: SMSQYSAPGDIVETQSGNIIRLT*NPNFLH
Trigger: GTGCAAGAAGTTTGGGTTGCACGTGAGTCGAATGAT...GTTACCACTTTGTGTTTCAACGATATCGCCTGGAGCACTATACTGTGACATCGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613181.4
ENST00000619129.4
CDS-3UTR GCA 90 bp CAGAAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCAATCATTCGACTCACGTaGAACCCAAACTTCTTGCAC +
Preference number: 4 (lower is better)
Translates to: QKTFITNVTGDDLQGVRSIIRLT*NPNFLH
Trigger: GTGCAAGAAGTTTGGGTTGCACGTGAGTCGAATGAT...TGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR GCA 90 bp TTGCAGGGAGTCAGGTCACTGGAATCAATAGTTAACAAGATGGTTGTCCTTTGGCTTCCTGATTTGCTTTaGTTTCCGGGGTTTGAGGAT +
Preference number: 4 (lower is better)
Translates to: LQGVRSLESIVNKMVVLWLPDLL*FPGFED
Trigger: ATCCTCAAACCCCGGAAAGCAAAGCAAATCAGGAAG...CCAAAGGACAACCATCTTGTTAACTATTGATTCCAGTGACCTGACTCCCTGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000398006.6
ENST00000524671.1
ENST00000525910.1
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR GCA 90 bp AGAAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACCTTCCTGATTTGCTTTaGTTTCCGGGGTTTGAGGAT +
Preference number: 4 (lower is better)
Translates to: RRPLLQMLQAMTCRESGHLPDLL*FPGFED
Trigger: ATCCTCAAACCCCGGAAAGCAAAGCAAATCAGGAAG...GTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000398006.6
ENST00000524671.1
ENST00000525910.1
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR GCA 90 bp TCACTGGAATCAATAGTTAACAAGATGGTTGTCCTTTGGGGCCACAGGTGTGTTCTTCCTGATTTGCTTTaGTTTCCGGGGTTTGAGGAT +
Preference number: 4 (lower is better)
Translates to: SLESIVNKMVVLWGHRCVLPDLL*FPGFED
Trigger: ATCCTCAAACCCCGGAAAGCAAAGCAAATCAGGAAG...AACACACCTGTGGCCCCAAAGGACAACCATCTTGTTAACTATTGATTCCAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000398006.6
ENST00000524671.1
ENST00000525910.1
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR GCA 90 bp CCACATGTTGTGACTGTGAGGATCAAACGAGATGCTGTGAAAGTGCCTTGTAAACTTCCTGATTTGCTTTaGTTTCCGGGGTTTGAGGAT +
Preference number: 4 (lower is better)
Translates to: PHVVTVRIKRDAVKVPCKLPDLL*FPGFED
Trigger: ATCCTCAAACCCCGGAAAGCAAAGCAAATCAGGAAG...TTTACAAGGCACTTTCACAGCATCTCGTTTGATCCTCACAGTCACAACATGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR GCA 90 bp ACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAACTTCCTGATTTGCTTTaGTTTCCGGGGTTTGAGGAT +
Preference number: 4 (lower is better)
Translates to: TFITNVTGDDLQGVRSLELPDLL*FPGFED
Trigger: ATCCTCAAACCCCGGAAAGCAAAGCAAATCAGGAAG...TTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000398006.6
ENST00000524671.1
ENST00000525910.1
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR GCA 90 bp GGTGTGTTGCTAACCTCCACTTTTCTTCCTGATTTGCTTTGCTTTCCGGGGTTTCTTTTCTTCCTGATTTaGTTTGCTTTCCGGGGTTTG +
Preference number: 4 (lower is better)
Translates to: GVLLTSTFLPDLLCFPGFLFFLI*FAFRGL
Trigger: CAAACCCCGGAAAGCAAAGCAAATCAGGAAGAAAAG...AAACCCCGGAAAGCAAAGCAAATCAGGAAGAAAAGTGGAGGTTAGCAACACACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000524671.1
ENST00000525910.1
ENST00000619129.4
CDS-3UTR GCA 90 bp AGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGCTTTTCTTCCTGATTTaGTTTGCTTTCCGGGGTTTG +
Preference number: 4 (lower is better)
Translates to: RPLLQMLQAMTCRESGHWLFFLI*FAFRGL
Trigger: CAAACCCCGGAAAGCAAAGCAAATCAGGAAGAAAAG...CCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000398006.6
ENST00000524671.1
ENST00000525910.1
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR GCA 90 bp CAAGTAATGTTTTCATGGTTGAGTGAGGAATATGGAGGAGCAATAGATGAGAGTCACACAGCACTGCTGTaGTGGTCTAACACACAGGCA +
Preference number: 4 (lower is better)
Translates to: QVMFSWLSEEYGGAIDESHTALL*WSNTQA
Trigger: TGCCTGTGTGTTAGACCAGCACAGCAGTGCTGTGTG...ACTCTCATCTATTGCTCCTCCATATTCCTCACTCAACCATGAAAACATTACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR GCA 90 bp GTCAGAAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTAAGCAGAACAGTCAGTaGAGGCTGAACACTGCTTTT +
Preference number: 4 (lower is better)
Translates to: VRRPLLQMLQAMTCRESGKQNSQ*RLNTAF
Trigger: AAAAGCAGTGTTCAGCCTGCACTGACTGTTCTGCTT...ACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTTCTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616540.5
CDS-3UTR GCA 90 bp CAGGGAGTCAGGTCACTGGAATCAATAGTTAACAAGATGGTTGTCCTTTGGGGCAATAAGTATCTTGCATaGTTCCTCCTTTTGGCAAGC +
Preference number: 4 (lower is better)
Translates to: QGVRSLESIVNKMVVLWGNKYLA*FLLLAS
Trigger: GCTTGCCAAAAGGAGGAAGCATGCAAGATACTTATT...GCCCCAAAGGACAACCATCTTGTTAACTATTGATTCCAGTGACCTGACTCCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616540.5
CDS-3UTR GCA 90 bp TGTCTACCACATGTTGTGACTGTGAGGATCAAACGAGATGCTGTGAAAGTGCCTAGAGAACCATGCATTTaGCAAGTATACCTACTCCCT +
Preference number: 4 (lower is better)
Translates to: CLPHVVTVRIKRDAVKVPREPCI*QVYLLP
Trigger: AGGGAGTAGGTATACTTGGCAAATGCATGGTTCTCT...AGGCACTTTCACAGCATCTCGTTTGATCCTCACAGTCACAACATGTGGTAGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR GCA 90 bp TCAGAGAACCATGCATTTGCCAAGTATACCTACTCCCTCACTCACCCCATGATCCTTCCTGATTTCATTTaGAGCATGAATCACCTGGTT +
Preference number: 4 (lower is better)
Translates to: SENHAFAKYTYSLTHPMILPDFI*SMNHLV
Trigger: AACCAGGTGATTCATGCTGCAAATGAAATCAGGAAG...GATCATGGGGTGAGTGAGGGAGTAGGTATACTTGGCAAATGCATGGTTCTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR CCA 90 bp AAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGATGAGGTAGTGTGTTaGCTCCCAGTAGTTGAATGT +
Preference number: 4 (lower is better)
Translates to: KTFITNVTGDDLQGVRSLDEVVC*LPVVEC
Trigger: ACATTCAACTACTGGGAGCCAACACACTACCTCATC...CAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
CDS-3UTR CCA 90 bp TTGCAGGGAGTCAGGTCACTGGAATCAATAGTTAACAAGATGGTTGTCCTTTGGGATGAGGTAGTGTGTTaGCTCCCAGTAGTTGAATGT +
Preference number: 4 (lower is better)
Translates to: LQGVRSLESIVNKMVVLWDEVVC*LPVVEC
Trigger: ACATTCAACTACTGGGAGCCAACACACTACCTCATC...CCAAAGGACAACCATCTTGTTAACTATTGATTCCAGTGACCTGACTCCCTGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
CDS-3UTR CCA 90 bp AGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGCAAAACAATGTTGAGTaGTGCAATCACCAACTTCCC +
Preference number: 4 (lower is better)
Translates to: RPLLQMLQAMTCRESGHWQNNVE*CNHQLP
Trigger: GGGAAGTTGGTGATTGCACCACTCAACATTGTTTTG...CCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR CCA 90 bp GTCAGGTCACTGGAATCAATAGTTAACAAGATGGTTGTCCTTTGGGGCCACAGGAATTCGGTAAAATTCTaGATACAAATCAAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: VRSLESIVNKMVVLWGHRNSVKF*IQIKGP
Trigger: GGGCCCCTTGATTTGTATCCAGAATTTTACCGAATT...CCTGTGGCCCCAAAGGACAACCATCTTGTTAACTATTGATTCCAGTGACCTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR CCA 90 bp TTGTCCTTTGGGGCCACAGGTGTGTTGCTAACCTCCACTTTTCTTCCTGATTTGAATTCGGTAAAATTCTaGATACAAATCAAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: LSFGATGVLLTSTFLPDLNSVKF*IQIKGP
Trigger: GGGCCCCTTGATTTGTATCCAGAATTTTACCGAATT...CAAATCAGGAAGAAAAGTGGAGGTTAGCAACACACCTGTGGCCCCAAAGGACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000619129.4
CDS-3UTR CCA 90 bp CATGTCAGAAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGACAGTGTGGATGGTTaGGTCTGTAGCAATTCGGTA +
Preference number: 4 (lower is better)
Translates to: HVRRPLLQMLQAMTCRESDSVDG*VCSNSV
Trigger: TACCGAATTGCTACAGACCCAACCATCCACACTGTC...TGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTTCTGACATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR CCA 90 bp CAAGTAATGTTTTCATGGTTGAGTGAGGAATATGGAGGAGCAATAGATGAGAGTCCTTCTGGGACAGTGTaGATGGTTGGGTCTGTAGCA +
Preference number: 4 (lower is better)
Translates to: QVMFSWLSEEYGGAIDESPSGTV*MVGSVA
Trigger: TGCTACAGACCCAACCATCCACACTGTCCCAGAAGG...ACTCTCATCTATTGCTCCTCCATATTCCTCACTCAACCATGAAAACATTACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR CCA 90 bp TATTCATGTCAGAAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGACCTTCTGGGACAGTGTaGATGGTTGGGTCTGTAGCA +
Preference number: 4 (lower is better)
Translates to: YSCQKTFITNVTGDDLQGPSGTV*MVGSVA
Trigger: TGCTACAGACCCAACCATCCACACTGTCCCAGAAGG...TCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTTCTGACATGAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR CCA 90 bp CTAGCATCATTCGACTCACGTGCAACCCAAACTTCTTGCACACAGCCTTGTAAAGGGGTGTTTCTCTCATaGTGTCCAAATCCACTAAAT +
Preference number: 4 (lower is better)
Translates to: LASFDSRATQTSCTQPCKGVFLS*CPNPLN
Trigger: ATTTAGTGGATTTGGACACCATGAGAGAAACACCCC...TTTACAAGGCTGTGTGCAAGAAGTTTGGGTTGCACGTGAGTCGAATGATGCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619129.4
CDS-3UTR CCA 90 bp GTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAATCAATAGTTAACAAGAGAAGCATCAAGGAATaGTCTATAGGCCAAGCTGAT +
Preference number: 4 (lower is better)
Translates to: VTGDDLQGVRSLESIVNKRSIKE*SIGQAD
Trigger: ATCAGCTTGGCCTATAGACCATTCCTTGATGCTTCT...CTTGTTAACTATTGATTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000398006.6
ENST00000524671.1
ENST00000525910.1
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR CCA 90 bp ACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAATCAATAGTTTTGGAGGTGGGCCTTTaGAAGGGAATTAGGTCAAAA +
Preference number: 4 (lower is better)
Translates to: TNVTGDDLQGVRSLESIVLEVGL*KGIRSK
Trigger: TTTTGACCTAATTCCCTTCCAAAGGCCCACCTCCAA...AACTATTGATTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524671.1
CDS-3UTR CCA 90 bp CAGAAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCAATTCTTCCTGTAAGTTaGTTCTGCTCTTCTCCGGTC +
Preference number: 4 (lower is better)
Translates to: QKTFITNVTGDDLQGVRSILPVS*FCSSPV
Trigger: GACCGGAGAAGAGCAGAACCAACTTACAGGAAGAAT...TGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616540.5
CDS-3UTR CCA 90 bp ATCTATCTGTGCTTTAGGGCCTTTCTCTGCCTAGCTGCAAAAAGTTTACATGCATCCCTGCATCAGTCCTaGCCTTTCTTTGCGCTATAT +
Preference number: 4 (lower is better)
Translates to: IYLCFRAFLCLAAKSLHASLHQS*PFFALY
Trigger: ATATAGCGCAAAGAAAGGCCAGGACTGATGCAGGGA...TGCATGTAAACTTTTTGCAGCTAGGCAGAGAAAGGCCCTAAAGCACAGATAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616540.5
CDS-3UTR TCA 90 bp GACATTATACAAAACAATGTTGAGTGGTGCAATCACCAACTTCCCATAATAGTAACCCTTCCCCATAGATaGGGTAGTGTGTTGGCTCCC +
Preference number: 4 (lower is better)
Translates to: DIIQNNVEWCNHQLPIIVTLPHR*GSVLAP
Trigger: GGGAGCCAACACACTACCTCATCTATGGGGAAGGGT...TACTATTATGGGAAGTTGGTGATTGCACCACTCAACATTGTTTTGTATAATGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613181.4
ENST00000618252.1
CDS-3UTR TCA 90 bp AATGGAAGTCTTGTCCATATACCATCCAGTCATGGCTATCAACGTAGTGTACATAAAACATGCCAGTGCTaGGAACCAAGAAGGCTAGCA +
Preference number: 4 (lower is better)
Translates to: NGSLVHIPSSHGYQRSVHKTCQC*EPRRLA
Trigger: TGCTAGCCTTCTTGGTTCTCAGCACTGGCATGTTTT...ATGTACACTACGTTGATAGCCATGACTGGATGGTATATGGACAAGACTTCCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612489.1
ENST00000613181.4
ENST00000619129.4
CDS-3UTR TCA 90 bp TTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAATCAATCCACCTGTGTTTCATaGCCAGCAAATCAAAGGCAA +
Preference number: 4 (lower is better)
Translates to: LLQMLQAMTCRESGHWNQSTCVS*PANQRQ
Trigger: TTGCCTTTGATTTGCTGGTCATGAAACACAGGTGGA...TTGATTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR TCA 90 bp GTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAATCAATAGTTAACAAGAATCTCTCCTCTTTGTaGGGCTGGATGAAGAAAATT +
Preference number: 4 (lower is better)
Translates to: VTGDDLQGVRSLESIVNKNLSSL*GWMKKI
Trigger: AATTTTCTTCATCCAGCCTCACAAAGAGGAGAGATT...CTTGTTAACTATTGATTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR TCA 90 bp TTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAATCAATCTGATGGAATGAACTaGAGCTGCCAATTGTCAGGA +
Preference number: 4 (lower is better)
Translates to: LLQMLQAMTCRESGHWNQSDGMN*SCQLSG
Trigger: TCCTGACAATTGGCAGCTTCAGTTCATTCCATCAGA...TTGATTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR TCA 90 bp ATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAATCAATATCTGATGGAATGAACTaGAGCTGCCAATTGTCAGGA +
Preference number: 4 (lower is better)
Translates to: ITNVTGDDLQGVRSLESISDGMN*SCQLSG
Trigger: TCCTGACAATTGGCAGCTTCAGTTCATTCCATCAGA...TATTGATTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR TCA 90 bp AGAAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACAAAGGTTTTGGTAACTaGCCTCTGAACTCTGATGGA +
Preference number: 4 (lower is better)
Translates to: RRPLLQMLQAMTCRESGHKGFGN*PLNSDG
Trigger: TCCATCAGAGTTCAGAGGTCAGTTACCAAAACCTTT...GTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR TCA 90 bp TCACTGGAATCAATAGTTAACAAGATGGTTGTCCTTTGGGGCCACAGGTGTGTTAAAGGTTTTGGTAACTaGCCTCTGAACTCTGATGGA +
Preference number: 4 (lower is better)
Translates to: SLESIVNKMVVLWGHRCVKGFGN*PLNSDG
Trigger: TCCATCAGAGTTCAGAGGTCAGTTACCAAAACCTTT...AACACACCTGTGGCCCCAAAGGACAACCATCTTGTTAACTATTGATTCCAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR TCA 90 bp CATGTCAGAAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCACACTGTATACTGATCTaGCAGGAAGGGGACATAGAA +
Preference number: 4 (lower is better)
Translates to: HVRRPLLQMLQAMTCRESHCILI*QEGDIE
Trigger: TTCTATGTCCCCTTCCTGTCAGATCAGTATACAGTG...TGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTTCTGACATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000398006.6
ENST00000524671.1
ENST00000525910.1
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR TCA 90 bp TCACTGGAATCAATAGTTAACAAGATGGTTGTCCTTTGGGGCCACAGGTGTGTTCCCTCACTCACCCCATaGTCAAAGGCTATTAAAAAT +
Preference number: 4 (lower is better)
Translates to: SLESIVNKMVVLWGHRCVPSLTP*SKAIKN
Trigger: ATTTTTAATAGCCTTTGATCATGGGGTGAGTGAGGG...AACACACCTGTGGCCCCAAAGGACAACCATCTTGTTAACTATTGATTCCAGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000616540.5
CDS-3UTR TCA 90 bp AAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGCAAAACACAATAAATaGTTGCCACTGGAGCTTTGC +
Preference number: 4 (lower is better)
Translates to: KTFITNVTGDDLQGVRSLAKHNK*LPLELC
Trigger: GCAAAGCTCCAGTGGCAATCATTTATTGTGTTTTGC...CAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616540.5
CDS-3UTR TCA 90 bp ATTTTGGTAGCAGATGCCTACCGTGCAGACTGGTTCAGTAATGGTACTCAGCATGTAAACACCGACACGTaGAATAAAGTACAAGGATCA +
Preference number: 4 (lower is better)
Translates to: ILVADAYRADWFSNGTQHVNTDT*NKVQGS
Trigger: TGATCCTTGTACTTTATTTCACGTGTCGGTGTTTAC...ATGCTGAGTACCATTACTGAACCAGTCTGCACGGTAGGCATCTGCTACCAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR TCA 90 bp GTCAGGTCACTGGAATCAATAGTTAACAAGATGGTTGTCCTTTGGGGCCACAGGACAGAGGAAAAACAATaGGATGTGGAGCAATATATC +
Preference number: 4 (lower is better)
Translates to: VRSLESIVNKMVVLWGHRTEEKQ*DVEQYI
Trigger: GATATATTGCTCCACATCTCATTGTTTTTCCTCTGT...CCTGTGGCCCCAAAGGACAACCATCTTGTTAACTATTGATTCCAGTGACCTGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616540.5
CDS-3UTR GCA 90 bp AATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAATCAATAGTTAACGCAACCCAAACTTCTTaGACACAGCCTTGTAAAAGT +
Preference number: 4 (lower is better)
Translates to: NVTGDDLQGVRSLESIVNATQTS*TQPCKS
Trigger: ACTTTTACAAGGCTGTGTGCAAGAAGTTTGGGTTGC...GTTAACTATTGATTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR GCA 90 bp TTGCAGGGAGTCAGGTCACTGGAATCAATAGTTAACAAGATGGTTGTCCTTTGGGCAACCCAAACTTCTTaGACACAGCCTTGTAAAAGT +
Preference number: 4 (lower is better)
Translates to: LQGVRSLESIVNKMVVLWATQTS*TQPCKS
Trigger: ACTTTTACAAGGCTGTGTGCAAGAAGTTTGGGTTGC...CCAAAGGACAACCATCTTGTTAACTATTGATTCCAGTGACCTGACTCCCTGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR GCA 90 bp AATCACCAACTTCCCATAATAGTAGCTGTCAATGACCACCACAGGCACCAGAAAGCAACCCAAACTTCTTaGACACAGCCTTGTAAAAGT +
Preference number: 4 (lower is better)
Translates to: NHQLPIIVAVNDHHRHQKATQTS*TQPCKS
Trigger: ACTTTTACAAGGCTGTGTGCAAGAAGTTTGGGTTGC...TTTCTGGTGCCTGTGGTGGTCATTGACAGCTACTATTATGGGAAGTTGGTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618252.1
ENST00000619129.4
CDS-3UTR GCA 90 bp TTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAATCAAATCATTCGACTCACGTaGAACCCAAACTTCTTGCAC +
Preference number: 4 (lower is better)
Translates to: LLQMLQAMTCRESGHWNQIIRLT*NPNFLH
Trigger: GTGCAAGAAGTTTGGGTTGCACGTGAGTCGAATGAT...TTGATTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR GCA 90 bp AGAAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACCTTTTCTTCCTGATTTaGTTTGCTTTCCGGGGTTTG +
Preference number: 4 (lower is better)
Translates to: RRPLLQMLQAMTCRESGHLFFLI*FAFRGL
Trigger: CAAACCCCGGAAAGCAAAGCAAATCAGGAAGAAAAG...GTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000398006.6
ENST00000524671.1
ENST00000525910.1
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR GCA 90 bp GATGACTTGCAGGGAGTCAGGTCACTGGAATCAATAGTTAACAAGATGGTTGTCCTTTTCTTCCTGATTTaGTTTGCTTTCCGGGGTTTG +
Preference number: 4 (lower is better)
Translates to: DDLQGVRSLESIVNKMVVLFFLI*FAFRGL
Trigger: CAAACCCCGGAAAGCAAAGCAAATCAGGAAGAAAAG...GACAACCATCTTGTTAACTATTGATTCCAGTGACCTGACTCCCTGCAAGTCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000398006.6
ENST00000524671.1
ENST00000525910.1
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR GCA 90 bp ACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAATCAATAGTTCTTTTCTTCCTGATTTaGTTTGCTTTCCGGGGTTTG +
Preference number: 4 (lower is better)
Translates to: TNVTGDDLQGVRSLESIVLFFLI*FAFRGL
Trigger: CAAACCCCGGAAAGCAAAGCAAATCAGGAAGAAAAG...AACTATTGATTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000398006.6
ENST00000524671.1
ENST00000525910.1
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR GCA 90 bp AAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGCTTTTCTTCCTGATTTaGTTTGCTTTCCGGGGTTTG +
Preference number: 4 (lower is better)
Translates to: KTFITNVTGDDLQGVRSLLFFLI*FAFRGL
Trigger: CAAACCCCGGAAAGCAAAGCAAATCAGGAAGAAAAG...CAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000398006.6
ENST00000524671.1
ENST00000525910.1
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR GCA 90 bp CCACATGTTGTGACTGTGAGGATCAAACGAGATGCTGTGAAAGTGCCTTGTAAAGGGATAAAAATCACCTaGCTTGTCTACCACATGTTG +
Preference number: 4 (lower is better)
Translates to: PHVVTVRIKRDAVKVPCKGIKIT*LVYHML
Trigger: CAACATGTGGTAGACAAGGCAGGTGATTTTTATCCC...TTTACAAGGCACTTTCACAGCATCTCGTTTGATCCTCACAGTCACAACATGTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR GCA 90 bp CAAGTAATGTTTTCATGGTTGAGTGAGGAATATGGAGGAGCAATAGATGAGAGTTGCATCACACAGCACTaGTGTGCTGGTCTAACACAC +
Preference number: 4 (lower is better)
Translates to: QVMFSWLSEEYGGAIDESCITQH*CAGLTH
Trigger: GTGTGTTAGACCAGCACAGCAGTGCTGTGTGATGCA...ACTCTCATCTATTGCTCCTCCATATTCCTCACTCAACCATGAAAACATTACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR GCA 90 bp CGCTTCAACTCCGTCTCTGATATTCCTGCAGAGGAGATCTCAAAGAGGAGCTTTGAAATCAGAGAACCATaGATTTGCCAAGTATACCTA +
Preference number: 4 (lower is better)
Translates to: RFNSVSDIPAEEISKRSFEIREP*ICQVYL
Trigger: TAGGTATACTTGGCAAATGCATGGTTCTCTGATTTC...AAAGCTCCTCTTTGAGATCTCCTCTGCAGGAATATCAGAGACGGAGTTGAAGCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR GCA 90 bp TTAGGTCACAGTTCCTCAAATGGTCACCTTTTTCCTGAGATAGCTCCAGGACAGAACACAATAAATGATTaGCACTGGAGCTTTGCCCAA +
Preference number: 4 (lower is better)
Translates to: LGHSSSNGHLFPEIAPGQNTIND*HWSFAQ
Trigger: TTGGGCAAAGCTCCAGTGGCAATCATTTATTGTGTT...CTGTCCTGGAGCTATCTCAGGAAAAAGGTGACCATTTGAGGAACTGTGACCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR CCA 90 bp TTGTCCATATACCATCCAGTCATGGCTATCAACGTAGTGTACATACAGAAGCTAGCGAATGGCATATGCTaGGGAATATTCCCAAGTCTG +
Preference number: 4 (lower is better)
Translates to: LSIYHPVMAINVVYIQKLANGIC*GIFPSL
Trigger: CAGACTTGGGAATATTCCCCAGCATATGCCATTCGC...TAGCTTCTGTATGTACACTACGTTGATAGCCATGACTGGATGGTATATGGACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612489.1
ENST00000613181.4
ENST00000619129.4
CDS-3UTR CCA 90 bp ATGGCTATCAACGTAGTGTACATACAGAAGCTACTAGGAAGGAATGCTGATGATGCGAATGGCATATGCTaGGGAATATTCCCAAGTCTG +
Preference number: 4 (lower is better)
Translates to: MAINVVYIQKLLGRNADDANGIC*GIFPSL
Trigger: CAGACTTGGGAATATTCCCCAGCATATGCCATTCGC...ATCATCAGCATTCCTTCCTAGTAGCTTCTGTATGTACACTACGTTGATAGCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612489.1
ENST00000619129.4
CDS-3UTR CCA 90 bp GTCAGAAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTAAGCATAGGAGCGAATaGCATATGCTGGGGAATATT +
Preference number: 4 (lower is better)
Translates to: VRRPLLQMLQAMTCRESGKHRSE*HMLGNI
Trigger: AATATTCCCCAGCATATGCCATTCGCTCCTATGCTT...ACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTTCTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR CCA 90 bp ACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAAAAGCATAGGAGCGAATaGCATATGCTGGGGAATATT +
Preference number: 4 (lower is better)
Translates to: TFITNVTGDDLQGVRSLEKHRSE*HMLGNI
Trigger: AATATTCCCCAGCATATGCCATTCGCTCCTATGCTT...TTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR CCA 90 bp GCAATGGAAGTCTTGTCCATATACCATCCAGTCATGGCTATCAACGTAGTGTACAAGCATAGGAGCGAATaGCATATGCTGGGGAATATT +
Preference number: 4 (lower is better)
Translates to: AMEVLSIYHPVMAINVVYKHRSE*HMLGNI
Trigger: AATATTCCCCAGCATATGCCATTCGCTCCTATGCTT...GTACACTACGTTGATAGCCATGACTGGATGGTATATGGACAAGACTTCCATTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612489.1
ENST00000613181.4
ENST00000619129.4
CDS-3UTR CCA 90 bp AAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGCAAAACAATGTTGAGTaGTGCAATCACCAACTTCCC +
Preference number: 4 (lower is better)
Translates to: KTFITNVTGDDLQGVRSLQNNVE*CNHQLP
Trigger: GGGAAGTTGGTGATTGCACCACTCAACATTGTTTTG...CAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR CCA 90 bp CAGAAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACAAAACAATGTTGAGTaGTGCAATCACCAACTTCCC +
Preference number: 4 (lower is better)
Translates to: QKTFITNVTGDDLQGVRSQNNVE*CNHQLP
Trigger: GGGAAGTTGGTGATTGCACCACTCAACATTGTTTTG...TGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR CCA 90 bp GTCAGAAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTGGGGTGTTTCTCTCATaGTGTCCAAATCCACTAAAT +
Preference number: 4 (lower is better)
Translates to: VRRPLLQMLQAMTCRESGGVFLS*CPNPLN
Trigger: ATTTAGTGGATTTGGACACCATGAGAGAAACACCCC...ACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTTCTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR CCA 90 bp ACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAATCAATAGTTGGGGTGTTTCTCTCATaGTGTCCAAATCCACTAAAT +
Preference number: 4 (lower is better)
Translates to: TNVTGDDLQGVRSLESIVGVFLS*CPNPLN
Trigger: ATTTAGTGGATTTGGACACCATGAGAGAAACACCCC...AACTATTGATTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR CCA 90 bp AATGGTCACCTTTTTCCTGAGATAGCTCCAGGACAGGGTCCTAGTCCTGTGAAGTCCATTCTTCTTTATTaGATGAATATTTTGGCTCCC +
Preference number: 4 (lower is better)
Translates to: NGHLFPEIAPGQGPSPVKSILLY*MNILAP
Trigger: GGGAGCCAAAATATTCATCCAATAAAGAAGAATGGA...CTTCACAGGACTAGGACCCTGTCCTGGAGCTATCTCAGGAAAAAGGTGACCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR CCA 90 bp ACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAATCAATAGTTAGAAGCATCAAGGAATaGTCTATAGGCCAAGCTGAT +
Preference number: 4 (lower is better)
Translates to: TNVTGDDLQGVRSLESIVRSIKE*SIGQAD
Trigger: ATCAGCTTGGCCTATAGACCATTCCTTGATGCTTCT...AACTATTGATTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000398006.6
ENST00000524671.1
ENST00000525910.1
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR CCA 90 bp CAATATCAGTTAGGTCTCTGGTTAACCTCATCAGTCCTTTCAAGTAATGTTTTCGCTGCCAAACAGCTTTaGTGGAGAAGCCCATATGGC +
Preference number: 4 (lower is better)
Translates to: QYQLGLWLTSSVLSSNVFAAKQL*WRSPYG
Trigger: GCCATATGGGCTTCTCCACCAAAGCTGTTTGGCAGC...GAAAACATTACTTGAAAGGACTGATGAGGTTAACCAGAGACCTAACTGATATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR CCA 90 bp TTAGGTCACAGTTCCTCAAATGGTCACCTTTTTCCTGAGATAGCTCCAGGACAGTATCAGTTAGGTCTCTaGTTAACCTCATCAGTCCTT +
Preference number: 4 (lower is better)
Translates to: LGHSSSNGHLFPEIAPGQYQLGL*LTSSVL
Trigger: AAGGACTGATGAGGTTAACCAGAGACCTAACTGATA...CTGTCCTGGAGCTATCTCAGGAAAAAGGTGACCATTTGAGGAACTGTGACCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR CCA 90 bp CAATATCAGTTAGGTCTCTGGTTAACCTCATCAGTCCTTTCAAGTAATGTTTTCACAGCACTGCTGTGCTaGTCTAACACACAGGCAGAC +
Preference number: 4 (lower is better)
Translates to: QYQLGLWLTSSVLSSNVFTALLC*SNTQAD
Trigger: GTCTGCCTGTGTGTTAGACCAGCACAGCAGTGCTGT...GAAAACATTACTTGAAAGGACTGATGAGGTTAACCAGAGACCTAACTGATATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR CCA 90 bp TATTCCTGCAGAGGAGATCTCAAAGAGGAGCTTTTTAATATTGTAACTAGCCATAGAATTGCTTCAACCTaGGAGGCAGAGGTTGCAGCG +
Preference number: 4 (lower is better)
Translates to: YSCRGDLKEELFNIVTSHRIAST*EAEVAA
Trigger: CGCTGCAACCTCTGCCTCCCAGGTTGAAGCAATTCT...ATGGCTAGTTACAATATTAAAAAGCTCCTCTTTGAGATCTCCTCTGCAGGAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR TCA 90 bp AGAAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACAAAAGGTATACTCTTTaGTCCTGTCTACATCTCCCA +
Preference number: 4 (lower is better)
Translates to: RRPLLQMLQAMTCRESGHKRYTL*SCLHLP
Trigger: TGGGAGATGTAGACAGGATCAAAGAGTATACCTTTT...GTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398006.6
CDS-3UTR TCA 90 bp CAAAACAATGTTGAGTGGTGCAATCACCAACTTCCCATAATAGTAGCTGTCAATTGTAGAATTCTTGCATaGAATGCAGCTGGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: QNNVEWCNHQLPIIVAVNCRILA*NAAGQA
Trigger: TGCCTGGCCAGCTGCATTTCATGCAAGAATTCTACA...ATTGACAGCTACTATTATGGGAAGTTGGTGATTGCACCACTCAACATTGTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613181.4
ENST00000618252.1
ENST00000619129.4
CDS-3UTR TCA 90 bp AGGTCACTGGAATCAATAGTTAACAAGATGGTTGTCCTTTGGGGCCACAGGTGTTATACAAAACAATGTTaGGTGGTGCAATCACCAACT +
Preference number: 4 (lower is better)
Translates to: RSLESIVNKMVVLWGHRCYTKQC*VVQSPT
Trigger: AGTTGGTGATTGCACCACTCAACATTGTTTTGTATA...ACACCTGTGGCCCCAAAGGACAACCATCTTGTTAACTATTGATTCCAGTGACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR TCA 90 bp AGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGTATACAAAACAATGTTaGGTGGTGCAATCACCAACT +
Preference number: 4 (lower is better)
Translates to: RPLLQMLQAMTCRESGHWYTKQC*VVQSPT
Trigger: AGTTGGTGATTGCACCACTCAACATTGTTTTGTATA...CCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR TCA 90 bp ACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAAAATCTCTCCTCTTTGTaGGGCTGGATGAAGAAAATT +
Preference number: 4 (lower is better)
Translates to: TFITNVTGDDLQGVRSLENLSSL*GWMKKI
Trigger: AATTTTCTTCATCCAGCCTCACAAAGAGGAGAGATT...TTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR TCA 90 bp GTCTGTAGCAATTCGGTAAAATTCTGGATACAAATCAAGGGGCCCGTGATATCCAATCTCTCCTCTTTGTaGGGCTGGATGAAGAAAATT +
Preference number: 4 (lower is better)
Translates to: VCSNSVKFWIQIKGPVISNLSSL*GWMKKI
Trigger: AATTTTCTTCATCCAGCCTCACAAAGAGGAGAGATT...GGATATCACGGGCCCCTTGATTTGTATCCAGAATTTTACCGAATTGCTACAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000613181.4
ENST00000619129.4
CDS-3UTR TCA 90 bp TATTCATGTCAGAAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGACACAGAGCGAGAAAATaGCAAGAGCCCAAACAGGAA +
Preference number: 4 (lower is better)
Translates to: YSCQKTFITNVTGDDLQGHRARK*QEPKQE
Trigger: TTCCTGTTTGGGCTCTTGTCATTTTCTCGCTCTGTG...TCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTTCTGACATGAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR TCA 90 bp TTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAATCAAAAAGGTTTTGGTAACTaGCCTCTGAACTCTGATGGA +
Preference number: 4 (lower is better)
Translates to: LLQMLQAMTCRESGHWNQKGFGN*PLNSDG
Trigger: TCCATCAGAGTTCAGAGGTCAGTTACCAAAACCTTT...TTGATTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR TCA 90 bp CAATATATCTATCTGTGCTTTAGGGCCTTTCTCTGCCTAGCTGCAAAAAGTTTAACGTACACTGTATACTaGTCTGACAGGAAGGGGACA +
Preference number: 4 (lower is better)
Translates to: QYIYLCFRAFLCLAAKSLTYTVY*SDRKGT
Trigger: TGTCCCCTTCCTGTCAGATCAGTATACAGTGTACGT...TAAACTTTTTGCAGCTAGGCAGAGAAAGGCCCTAAAGCACAGATAGATATATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616540.5
CDS-3UTR TCA 90 bp TATTCATGTCAGAAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGACTCCACTTTTCTTCCTaGTTTGCTTTGCTTTCCGGG +
Preference number: 4 (lower is better)
Translates to: YSCQKTFITNVTGDDLQGLHFSS*FALLSG
Trigger: CCCGGAAAGCAAAGCAAATCAGGAAGAAAAGTGGAG...TCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTTCTGACATGAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR TCA 90 bp ACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAATCAATAGTTTGTAGTTTTGTCTGTTaGTATCTTCACATGGAGGAG +
Preference number: 4 (lower is better)
Translates to: TNVTGDDLQGVRSLESIVCSFVC*YLHMEE
Trigger: CTCCTCCATGTGAAGATATCAACAGACAAAACTACA...AACTATTGATTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616540.5
CDS-3UTR TCA 90 bp TCATGTCAGAAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCGCTATAAATATACACTaGTCCTTTTCACTGGGGGTG +
Preference number: 4 (lower is better)
Translates to: SCQKTFITNVTGDDLQGVAINIH*SFSLGV
Trigger: CACCCCCAGTGAAAAGGATCAGTGTATATTTATAGC...GACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTTCTGACATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616540.5
CDS-3UTR TCA 90 bp ATTTTGGTAGCAGATGCCTACCGTGCAGACTGGTTCAGTAATGGTACTCAGCATAAAAGTGATAGGAACTaGTATTTCCAAGGAATCCCT +
Preference number: 4 (lower is better)
Translates to: ILVADAYRADWFSNGTQHKSDRN*YFQGIP
Trigger: AGGGATTCCTTGGAAATATCAGTTCCTATCACTTTT...ATGCTGAGTACCATTACTGAACCAGTCTGCACGGTAGGCATCTGCTACCAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR TCA 90 bp AGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGATTTCATTTGCAGCATaGATCACCTGGTTATACAGA +
Preference number: 4 (lower is better)
Translates to: RPLLQMLQAMTCRESGHWISFAA*ITWLYR
Trigger: TCTGTATAACCAGGTGATTCATGCTGCAAATGAAAT...CCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616540.5
CDS-3UTR TCA 90 bp CATGTCAGAAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGATCAGGAAGACAAGTaGATTGGACAATACTCTTGC +
Preference number: 4 (lower is better)
Translates to: HVRRPLLQMLQAMTCRESDQEDK*IGQYSC
Trigger: GCAAGAGTATTGTCCAATTCACTTGTCTTCCTGATC...TGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTTCTGACATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616540.5
CDS-3UTR GCA 90 bp TTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAATCAGCAACCCAAACTTCTTaGACACAGCCTTGTAAAAGT +
Preference number: 4 (lower is better)
Translates to: FITNVTGDDLQGVRSLESATQTS*TQPCKS
Trigger: ACTTTTACAAGGCTGTGTGCAAGAAGTTTGGGTTGC...TGATTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR GCA 90 bp GATGACTTGCAGGGAGTCAGGTCACTGGAATCAATAGTTAACAAGATGGTTGTCAACAATGTTGAGTGGTaGAATCACCAACTTCCCATA +
Preference number: 4 (lower is better)
Translates to: DDLQGVRSLESIVNKMVVNNVEW*NHQLPI
Trigger: TATGGGAAGTTGGTGATTGCACCACTCAACATTGTT...GACAACCATCTTGTTAACTATTGATTCCAGTGACCTGACTCCCTGCAAGTCATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR GCA 90 bp CATTCGACTCACGTGCAACCCAAACTTCTTGCACACAGCCTTGTAAAAGTAAAGAACAATGTTGAGTGGTaGAATCACCAACTTCCCATA +
Preference number: 4 (lower is better)
Translates to: HSTHVQPKLLAHSLVKVKNNVEW*NHQLPI
Trigger: TATGGGAAGTTGGTGATTGCACCACTCAACATTGTT...CTTTACTTTTACAAGGCTGTGTGCAAGAAGTTTGGGTTGCACGTGAGTCGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619129.4
CDS-3UTR GCA 90 bp TCACTGGAATCAATAGTTAACAAGATGGTTGTCCTTTGGGGCCACAGGTGTGTTCTTTCTCTGCCTAGCTaGAAAAAGTTTACATGCAGA +
Preference number: 4 (lower is better)
Translates to: SLESIVNKMVVLWGHRCVLSLPS*KKFTCR
Trigger: TCTGCATGTAAACTTTTTGCAGCTAGGCAGAGAAAG...AACACACCTGTGGCCCCAAAGGACAACCATCTTGTTAACTATTGATTCCAGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616540.5
CDS-3UTR GCA 90 bp TATTCCTGCAGAGGAGATCTCAAAGAGGAGCTTTTTAATATTGTAACTAGCCATCTGAAGCAGGAGAATTaGTTGAACCCGGGAGACAGA +
Preference number: 4 (lower is better)
Translates to: YSCRGDLKEELFNIVTSHLKQEN*LNPGDR
Trigger: TCTGTCTCCCGGGTTCAAGCAATTCTCCTGCTTCAG...ATGGCTAGTTACAATATTAAAAAGCTCCTCTTTGAGATCTCCTCTGCAGGAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR GCA 90 bp CAATATCAGTTAGGTCTCTGGTTAACCTCATCAGTCCTTTCAAGTAATGTTTTCCTGAAGCAGGAGAATTaGTTGAACCCGGGAGACAGA +
Preference number: 4 (lower is better)
Translates to: QYQLGLWLTSSVLSSNVFLKQEN*LNPGDR
Trigger: TCTGTCTCCCGGGTTCAAGCAATTCTCCTGCTTCAG...GAAAACATTACTTGAAAGGACTGATGAGGTTAACCAGAGACCTAACTGATATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR GCA 90 bp TACAGATACACCAGAAAGCCTCTGAAATCCAACGATGCCATACGGAAGTCTGATCTTCCTGATTTCATTTaGAGCATGAATCACCTGGTT +
Preference number: 4 (lower is better)
Translates to: YRYTRKPLKSNDAIRKSDLPDFI*SMNHLV
Trigger: AACCAGGTGATTCATGCTGCAAATGAAATCAGGAAG...ATCAGACTTCCGTATGGCATCGTTGGATTTCAGAGGCTTTCTGGTGTATCTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR GCA 90 bp TCACTGGAATCAATAGTTAACAAGATGGTTGTCCTTTGGGGCCACAGGTGTGTTCAATATATCTATCTGTaGTTTAGGGCCTTTCTCTGC +
Preference number: 4 (lower is better)
Translates to: SLESIVNKMVVLWGHRCVQYIYL*FRAFLC
Trigger: GCAGAGAAAGGCCCTAAAGCACAGATAGATATATTG...AACACACCTGTGGCCCCAAAGGACAACCATCTTGTTAACTATTGATTCCAGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616540.5
CDS-3UTR CCA 90 bp TTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAATCAAAGCATAGGAGCGAATaGCATATGCTGGGGAATATT +
Preference number: 4 (lower is better)
Translates to: FITNVTGDDLQGVRSLESKHRSE*HMLGNI
Trigger: AATATTCCCCAGCATATGCCATTCGCTCCTATGCTT...TGATTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR CCA 90 bp AGCAATGGAAGTCTTGTCCATATACCATCCAGTCATGGCTATCAACGTAGTGTAAAGCATAGGAGCGAATaGCATATGCTGGGGAATATT +
Preference number: 4 (lower is better)
Translates to: SNGSLVHIPSSHGYQRSVKHRSE*HMLGNI
Trigger: AATATTCCCCAGCATATGCCATTCGCTCCTATGCTT...TACACTACGTTGATAGCCATGACTGGATGGTATATGGACAAGACTTCCATTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612489.1
ENST00000613181.4
ENST00000619129.4
CDS-3UTR CCA 90 bp TTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAATCACAAAACAATGTTGAGTaGTGCAATCACCAACTTCCC +
Preference number: 4 (lower is better)
Translates to: FITNVTGDDLQGVRSLESQNNVE*CNHQLP
Trigger: GGGAAGTTGGTGATTGCACCACTCAACATTGTTTTG...TGATTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR CCA 90 bp ACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAATCAATAGTTAATTCGGTAAAATTCTaGATACAAATCAAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: TNVTGDDLQGVRSLESIVNSVKF*IQIKGP
Trigger: GGGCCCCTTGATTTGTATCCAGAATTTTACCGAATT...AACTATTGATTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR CCA 90 bp TCAGAGAACCATGCATTTGCCAAGTATACCTACTCCCTCACTCACCCCATGATCTCCATTCTTCTTTATTaGATGAATATTTTGGCTCCC +
Preference number: 4 (lower is better)
Translates to: SENHAFAKYTYSLTHPMISILLY*MNILAP
Trigger: GGGAGCCAAAATATTCATCCAATAAAGAAGAATGGA...GATCATGGGGTGAGTGAGGGAGTAGGTATACTTGGCAAATGCATGGTTCTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR CCA 90 bp CATGTCAGAAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAAGAAGCATCAAGGAATaGTCTATAGGCCAAGCTGAT +
Preference number: 4 (lower is better)
Translates to: HVRRPLLQMLQAMTCRESRSIKE*SIGQAD
Trigger: ATCAGCTTGGCCTATAGACCATTCCTTGATGCTTCT...TGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTTCTGACATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000398006.6
ENST00000524671.1
ENST00000525910.1
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR CCA 90 bp CCATGTATTGTGCTCTCACTAAAGACATACATAGAACAGAGAGATCCAAAATCAAAGATGGTTGTCCTTTaGGGCCACAGGTGTGTTGCT +
Preference number: 4 (lower is better)
Translates to: PCIVLSLKTYIEQRDPKSKMVVL*GHRCVA
Trigger: AGCAACACACCTGTGGCCCCAAAGGACAACCATCTT...TGATTTTGGATCTCTCTGTTCTATGTATGTCTTTAGTGAGAGCACAATACATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616540.5
CDS-3UTR CCA 90 bp TTGCAGGGAGTCAGGTCACTGGAATCAATAGTTAACAAGATGGTTGTCCTTTGGATTAGGTCAAAAGAGTaGAGCACTCAACAATGGGAT +
Preference number: 4 (lower is better)
Translates to: LQGVRSLESIVNKMVVLWIRSKE*STQQWD
Trigger: ATCCCATTGTTGAGTGCTCCACTCTTTTGACCTAAT...CCAAAGGACAACCATCTTGTTAACTATTGATTCCAGTGACCTGACTCCCTGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524671.1
CDS-3UTR CCA 90 bp CGCTTCAACTCCGTCTCTGATATTCCTGCAGAGGAGATCTCAAAGAGGAGCTTTCAAGTAATGTTTTCATaGTTGAGTGAGGAATATGGA +
Preference number: 4 (lower is better)
Translates to: RFNSVSDIPAEEISKRSFQVMFS*LSEEYG
Trigger: TCCATATTCCTCACTCAACCATGAAAACATTACTTG...AAAGCTCCTCTTTGAGATCTCCTCTGCAGGAATATCAGAGACGGAGTTGAAGCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR CCA 90 bp CAGAAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCATATCAGTTAGGTCTCTaGTTAACCTCATCAGTCCTT +
Preference number: 4 (lower is better)
Translates to: QKTFITNVTGDDLQGVRSYQLGL*LTSSVL
Trigger: AAGGACTGATGAGGTTAACCAGAGACCTAACTGATA...TGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616540.5
CDS-3UTR CCA 90 bp ACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAATCAATAGTTTATTTGGATCCTGTGTaGCTGCAAAAGAACATGACT +
Preference number: 4 (lower is better)
Translates to: TNVTGDDLQGVRSLESIVYLDPV*LQKNMT
Trigger: AGTCATGTTCTTTTGCAGCCACACAGGATCCAAATA...AACTATTGATTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616540.5
CDS-3UTR CCA 90 bp TTAGGTCACAGTTCCTCAAATGGTCACCTTTTTCCTGAGATAGCTCCAGGACAGAATAGTACTGATATTTaGATCCTGTGTGGCTGCAAA +
Preference number: 4 (lower is better)
Translates to: LGHSSSNGHLFPEIAPGQNSTDI*ILCGCK
Trigger: TTTGCAGCCACACAGGATCCAAATATCAGTACTATT...CTGTCCTGGAGCTATCTCAGGAAAAAGGTGACCATTTGAGGAACTGTGACCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR CCA 90 bp TATTCATGTCAGAAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGCCATTCATCACAGATaGACCTCCATTCCTGGATTC +
Preference number: 4 (lower is better)
Translates to: YSCQKTFITNVTGDDLQGAIHHR*TSIPGF
Trigger: GAATCCAGGAATGGAGGTCCATCTGTGATGAATGGC...TCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTTCTGACATGAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616540.5
CDS-3UTR CCA 90 bp CAAGTAATGTTTTCATGGTTGAGTGAGGAATATGGAGGAGCAATAGATGAGAGTCATGCTTCCTCCTTTTaGCAAGCAGAACAGTCAGTG +
Preference number: 4 (lower is better)
Translates to: QVMFSWLSEEYGGAIDESHASSF*QAEQSV
Trigger: CACTGACTGTTCTGCTTGCCAAAAGGAGGAAGCATG...ACTCTCATCTATTGCTCCTCCATATTCCTCACTCAACCATGAAAACATTACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR CCA 90 bp CGCTTCAACTCCGTCTCTGATATTCCTGCAGAGGAGATCTCAAAGAGGAGCTTTGCTTTAATATGCTTGTaGAGGCCAAGATTAAATTGT +
Preference number: 4 (lower is better)
Translates to: RFNSVSDIPAEEISKRSFALICL*RPRLNC
Trigger: ACAATTTAATCTTGGCCTCCACAAGCATATTAAAGC...AAAGCTCCTCTTTGAGATCTCCTCTGCAGGAATATCAGAGACGGAGTTGAAGCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
3UTR CAA 72 bp CAGAAGACCTTTATTACAAATGTTACAGGCGATGACTaGCAGGGAGTCAGGTCACTGGAATCAATAGTTAAC +
Preference number: 4 (lower is better)
Translates to: QKTFITNVTGDD*QGVRSLESIVN
Trigger: GTTAACTATTGATTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000398006.6
ENST00000524671.1
ENST00000525910.1
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
3UTR CAA 72 bp ATTCGATGTCACAGTATAGTGCTCCAGGCGATATCGTaGAAACACAAAGTGGTAACATTTCTGAAGTGCAGA +
Preference number: 4 (lower is better)
Translates to: IRCHSIVLQAIS*KHKVVTFLKCR
Trigger: TCTGCACTTCAGAAATGTTACCACTTTGTGTTTCAACGATATCGCCTGGAGCACTATACTGTGACATCGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613181.4
ENST00000619129.4
CDS-3UTR TCA 90 bp GACATTATACAAAACAATGTTGAGTGGTGCAATCACCAACTTCCCATAATAGTAGCCATCAGCGACCAATaGAAGAAACTCTTCCACCTG +
Preference number: 4 (lower is better)
Translates to: DIIQNNVEWCNHQLPIIVAISDQ*KKLFHL
Trigger: CAGGTGGAAGAGTTTCTTTCATTGGTCGCTGATGGC...TACTATTATGGGAAGTTGGTGATTGCACCACTCAACATTGTTTTGTATAATGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613181.4
ENST00000618252.1
ENST00000619129.4
CDS-3UTR TCA 90 bp AGTAAAGACATTATACAAAACAATGTTGAGTGGTGCAATCACCAACTTCCCATAGCACCAGAAATAGTATaGGGGCCATCAGCGACCAAT +
Preference number: 4 (lower is better)
Translates to: SKDIIQNNVEWCNHQLPIAPEIV*GPSATN
Trigger: ATTGGTCGCTGATGGCCCTCATACTATTTCTGGTGC...TATGGGAAGTTGGTGATTGCACCACTCAACATTGTTTTGTATAATGTCTTTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613181.4
ENST00000618252.1
ENST00000619129.4
CDS-3UTR TCA 90 bp CAATATCAGTTAGGTCTCTGGTTAACCTCATCAGTCCTTTCAAGTAATGTTTTCAATAGTAGCTGTCAATaGCCACCACAGGCACCAGAA +
Preference number: 4 (lower is better)
Translates to: QYQLGLWLTSSVLSSNVFNSSCQ*PPQAPE
Trigger: TTCTGGTGCCTGTGGTGGTCATTGACAGCTACTATT...GAAAACATTACTTGAAAGGACTGATGAGGTTAACCAGAGACCTAACTGATATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616540.5
CDS-3UTR TCA 90 bp AGAAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTATACAAAACAATGTTaGGTGGTGCAATCACCAACT +
Preference number: 4 (lower is better)
Translates to: RRPLLQMLQAMTCRESGHYTKQC*VVQSPT
Trigger: AGTTGGTGATTGCACCACTCAACATTGTTTTGTATA...GTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR TCA 90 bp AAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGTATACAAAACAATGTTaGGTGGTGCAATCACCAACT +
Preference number: 4 (lower is better)
Translates to: KTFITNVTGDDLQGVRSLYTKQC*VVQSPT
Trigger: AGTTGGTGATTGCACCACTCAACATTGTTTTGTATA...CAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR TCA 90 bp ATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAATCAATAAATCTCTCCTCTTTGTaGGGCTGGATGAAGAAAATT +
Preference number: 4 (lower is better)
Translates to: ITNVTGDDLQGVRSLESINLSSL*GWMKKI
Trigger: AATTTTCTTCATCCAGCCTCACAAAGAGGAGAGATT...TATTGATTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR TCA 90 bp CAATATCAGTTAGGTCTCTGGTTAACCTCATCAGTCCTTTCAAGTAATGTTTTCTTGCTTTCCGGGGTTTaGGGATGGTGTAGTTTACGT +
Preference number: 4 (lower is better)
Translates to: QYQLGLWLTSSVLSSNVFLLSGV*GWCSLR
Trigger: ACGTAAACTACACCATCCTCAAACCCCGGAAAGCAA...GAAAACATTACTTGAAAGGACTGATGAGGTTAACCAGAGACCTAACTGATATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR TCA 90 bp CAAGTAATGTTTTCATGGTTGAGTGAGGAATATGGAGGAGCAATAGATGAGAGTAGGGTCCTAGTCCTGTaGAGTGCTTTAAAGAAGCTT +
Preference number: 4 (lower is better)
Translates to: QVMFSWLSEEYGGAIDESRVLVL*SALKKL
Trigger: AAGCTTCTTTAAAGCACTTCACAGGACTAGGACCCT...ACTCTCATCTATTGCTCCTCCATATTCCTCACTCAACCATGAAAACATTACTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR TCA 90 bp CAAGTAATGTTTTCATGGTTGAGTGAGGAATATGGAGGAGCAATAGATGAGAGTGGCTGCAAAAGAACATaGCTTCCAAACAGAAGCACT +
Preference number: 4 (lower is better)
Translates to: QVMFSWLSEEYGGAIDESGCKRT*LPNRST
Trigger: AGTGCTTCTGTTTGGAAGTCATGTTCTTTTGCAGCC...ACTCTCATCTATTGCTCCTCCATATTCCTCACTCAACCATGAAAACATTACTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR TCA 90 bp TCATTTCTATATTCCTTACCTATAACATTTGGCACAGCGTTCTGCCATGTATTGAAGGCACCTATAATGTaGCCCCAGATTGACTACAGG +
Preference number: 4 (lower is better)
Translates to: SFLYSLPITFGTAFCHVLKAPIM*PQIDYR
Trigger: CCTGTAGTCAATCTGGGGTCACATTATAGGTGCCTT...CAATACATGGCAGAACGCTGTGCCAAATGTTATAGGTAAGGAATATAGAAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR TCA 90 bp TCATTTCTATATTCCTTACCTATAACATTTGGCACAGCGTTCTGCCATGTATTGTCTGAGCAGGTGTGTTaGAACTGTTTTTCCCAGGCA +
Preference number: 4 (lower is better)
Translates to: SFLYSLPITFGTAFCHVLSEQVC*NCFSQA
Trigger: TGCCTGGGAAAAACAGTTTCAACACACCTGCTCAGA...CAATACATGGCAGAACGCTGTGCCAAATGTTATAGGTAAGGAATATAGAAATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR TCA 90 bp CAATATATCTATCTGTGCTTTAGGGCCTTTCTCTGCCTAGCTGCAAAAAGTTTATTCTTTCTTATCAGATaGCACCTACCAGGTAGGAGG +
Preference number: 4 (lower is better)
Translates to: QYIYLCFRAFLCLAAKSLFFLIR*HLPGRR
Trigger: CCTCCTACCTGGTAGGTGTCATCTGATAAGAAAGAA...TAAACTTTTTGCAGCTAGGCAGAGAAAGGCCCTAAAGCACAGATAGATATATTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616540.5
CDS-3UTR TCA 90 bp CCACATGTTGTGACTGTGAGGATCAAACGAGATGCTGTGAAAGTGCCTTGTAAAATTTCATTTGCAGCATaGATCACCTGGTTATACAGA +
Preference number: 4 (lower is better)
Translates to: PHVVTVRIKRDAVKVPCKISFAA*ITWLYR
Trigger: TCTGTATAACCAGGTGATTCATGCTGCAAATGAAAT...TTTACAAGGCACTTTCACAGCATCTCGTTTGATCCTCACAGTCACAACATGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR TCA 90 bp TGTGTTCTCATCGTTCAGCTCCCATTTATAAGTGAGAAGATGTGGTGTTTGGTTGCTCCCATTTATAAGTaGGAAGATGTGGTGTTTGGT +
Preference number: 4 (lower is better)
Translates to: CVLIVQLPFISEKMWCLVAPIYK*EDVVFG
Trigger: ACCAAACACCACATCTTCTCACTTATAAATGGGAGC...AACCAAACACCACATCTTCTCACTTATAAATGGGAGCTGAACGATGAGAACACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618252.1
CDS-3UTR GCA 90 bp GGAGTAAAGACATTATACAAAACAATGTTGAGTGGTGCAATCACCAACTTCCCAAATTCTTGCATGAAATaGAGCTGGCCAGGCATGAAG +
Preference number: 4 (lower is better)
Translates to: GVKTLYKTMLSGAITNFPNSCMK*SWPGMK
Trigger: CTTCATGCCTGGCCAGCTGCATTTCATGCAAGAATT...TGGGAAGTTGGTGATTGCACCACTCAACATTGTTTTGTATAATGTCTTTACTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613181.4
ENST00000618252.1
ENST00000619129.4
CDS-3UTR GCA 90 bp TCATGTCAGAAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAACAATGTTGAGTGGTaGAATCACCAACTTCCCATA +
Preference number: 4 (lower is better)
Translates to: SCQKTFITNVTGDDLQGVNNVEW*NHQLPI
Trigger: TATGGGAAGTTGGTGATTGCACCACTCAACATTGTT...GACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTTCTGACATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR GCA 90 bp ATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAATCAATAAACAATGTTGAGTGGTaGAATCACCAACTTCCCATA +
Preference number: 4 (lower is better)
Translates to: ITNVTGDDLQGVRSLESINNVEW*NHQLPI
Trigger: TATGGGAAGTTGGTGATTGCACCACTCAACATTGTT...TATTGATTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR GCA 90 bp AGCAATGGAAGTCTTGTCCATATACCATCCAGTCATGGCTATCAACGTAGTGTAAACAATGTTGAGTGGTaGAATCACCAACTTCCCATA +
Preference number: 4 (lower is better)
Translates to: SNGSLVHIPSSHGYQRSVNNVEW*NHQLPI
Trigger: TATGGGAAGTTGGTGATTGCACCACTCAACATTGTT...TACACTACGTTGATAGCCATGACTGGATGGTATATGGACAAGACTTCCATTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613181.4
ENST00000619129.4
CDS-3UTR GCA 90 bp AATGGCTTTCAGTTCCATCCATGTCCCATAAAGATCAGGTCCATGAGGAGTAAAAACAATGTTGAGTGGTaGAATCACCAACTTCCCATA +
Preference number: 4 (lower is better)
Translates to: NGFQFHPCPIKIRSMRSKNNVEW*NHQLPI
Trigger: TATGGGAAGTTGGTGATTGCACCACTCAACATTGTT...TTTACTCCTCATGGACCTGATCTTTATGGGACATGGATGGAACTGAAAGCCATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618252.1
CDS-3UTR GCA 90 bp TTCATTTCTATATTCCTTACCTATAACATTTGGCACAGCGTTCTGCCATGTATTTGCATCACACAGCACTaGTGTGCTGGTCTAACACAC +
Preference number: 4 (lower is better)
Translates to: FISIFLTYNIWHSVLPCICITQH*CAGLTH
Trigger: GTGTGTTAGACCAGCACAGCAGTGCTGTGTGATGCA...AATACATGGCAGAACGCTGTGCCAAATGTTATAGGTAAGGAATATAGAAATGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR GCA 90 bp CAATATCAGTTAGGTCTCTGGTTAACCTCATCAGTCCTTTCAAGTAATGTTTTCTTTCCAAGGAATCCCTaGATCAGTCCTGGCCTTTCT +
Preference number: 4 (lower is better)
Translates to: QYQLGLWLTSSVLSSNVFFPRNP*ISPGLS
Trigger: AGAAAGGCCAGGACTGATGCAGGGATTCCTTGGAAA...GAAAACATTACTTGAAAGGACTGATGAGGTTAACCAGAGACCTAACTGATATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR GCA 90 bp CCATGTATTGTGCTCTCACTAAAGACATACATAGAACAGAGAGATCCAAAATCATTTGGCACAGCGTTCTaGCATGTATTGTGCTCTCAC +
Preference number: 4 (lower is better)
Translates to: PCIVLSLKTYIEQRDPKSFGTAF*HVLCSH
Trigger: GTGAGAGCACAATACATGGCAGAACGCTGTGCCAAA...TGATTTTGGATCTCTCTGTTCTATGTATGTCTTTAGTGAGAGCACAATACATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR GCA 90 bp TCACTGGAATCAATAGTTAACAAGATGGTTGTCCTTTGGGGCCACAGGTGTGTTGAAATCAGAGAACCATaGATTTGCCAAGTATACCTA +
Preference number: 4 (lower is better)
Translates to: SLESIVNKMVVLWGHRCVEIREP*ICQVYL
Trigger: TAGGTATACTTGGCAAATGCATGGTTCTCTGATTTC...AACACACCTGTGGCCCCAAAGGACAACCATCTTGTTAACTATTGATTCCAGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616540.5
CDS-3UTR GCA 90 bp TTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAATCAAAACACAATAAATGATTaGCACTGGAGCTTTGCCCAA +
Preference number: 4 (lower is better)
Translates to: LLQMLQAMTCRESGHWNQNTIND*HWSFAQ
Trigger: TTGGGCAAAGCTCCAGTGGCAATCATTTATTGTGTT...TTGATTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616540.5
CDS-3UTR GCA 90 bp TGTGTTCTCATCGTTCAGCTCCCATTTATAAGTGAGAAGATGTGGTGTTTGGTTTGGTGTTTGGTTTTCTaGTCCTGTGTTAGTTTGCTG +
Preference number: 4 (lower is better)
Translates to: CVLIVQLPFISEKMWCLVWCLVF*SCVSLL
Trigger: CAGCAAACTAACACAGGAGCAGAAAACCAAACACCA...AACCAAACACCACATCTTCTCACTTATAAATGGGAGCTGAACGATGAGAACACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618252.1
CDS-3UTR CCA 90 bp TGTGTTCTCATCGTTCAGCTCCCATTTATAAGTGAGAAGATGTGGTGTTTGGTTAAGCATAGGAGCGAATaGCATATGCTGGGGAATATT +
Preference number: 4 (lower is better)
Translates to: CVLIVQLPFISEKMWCLVKHRSE*HMLGNI
Trigger: AATATTCCCCAGCATATGCCATTCGCTCCTATGCTT...AACCAAACACCACATCTTCTCACTTATAAATGGGAGCTGAACGATGAGAACACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618252.1
CDS-3UTR CCA 90 bp GACATTATACAAAACAATGTTGAGTGGTGCAATCACCAACTTCCCATAATAGTATGCATGAAATGCAGCTaGCCAGGCATGAAGCAACAG +
Preference number: 4 (lower is better)
Translates to: DIIQNNVEWCNHQLPIIVCMKCS*PGMKQQ
Trigger: CTGTTGCTTCATGCCTGGCCAGCTGCATTTCATGCA...TACTATTATGGGAAGTTGGTGATTGCACCACTCAACATTGTTTTGTATAATGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613181.4
ENST00000618252.1
ENST00000619129.4
CDS-3UTR CCA 90 bp GTTCTCATCGTTCAGCTCCCATTTATAAGTGAGAAGATGTGGTGTTTGGTTTTCCAAAACAATGTTGAGTaGTGCAATCACCAACTTCCC +
Preference number: 4 (lower is better)
Translates to: VLIVQLPFISEKMWCLVFQNNVE*CNHQLP
Trigger: GGGAAGTTGGTGATTGCACCACTCAACATTGTTTTG...GAAAACCAAACACCACATCTTCTCACTTATAAATGGGAGCTGAACGATGAGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618252.1
CDS-3UTR CCA 90 bp TTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAATCAAAATTCGGTAAAATTCTaGATACAAATCAAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: LLQMLQAMTCRESGHWNQNSVKF*IQIKGP
Trigger: GGGCCCCTTGATTTGTATCCAGAATTTTACCGAATT...TTGATTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR CCA 90 bp AGTGCCACAGAGCGAGAAAATGACAAGAGCCCAAACAGGAAGACAGTTCCTAATTCCATTCTTCTTTATTaGATGAATATTTTGGCTCCC +
Preference number: 4 (lower is better)
Translates to: SATERENDKSPNRKTVPNSILLY*MNILAP
Trigger: GGGAGCCAAAATATTCATCCAATAAAGAAGAATGGA...ATTAGGAACTGTCTTCCTGTTTGGGCTCTTGTCATTTTCTCGCTCTGTGGCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619129.4
CDS-3UTR CCA 90 bp TTCATTTCTATATTCCTTACCTATAACATTTGGCACAGCGTTCTGCCATGTATTGTGGAGAAGCCCATATaGCCTAAGAGAGGCTTGCTA +
Preference number: 4 (lower is better)
Translates to: FISIFLTYNIWHSVLPCIVEKPI*PKRGLL
Trigger: TAGCAAGCCTCTCTTAGGCCATATGGGCTTCTCCAC...AATACATGGCAGAACGCTGTGCCAAATGTTATAGGTAAGGAATATAGAAATGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR CCA 90 bp TTCATTTCTATATTCCTTACCTATAACATTTGGCACAGCGTTCTGCCATGTATTGAGAGTAAGGAAACCTaGGTTCCAGTCCCAGCTCTA +
Preference number: 4 (lower is better)
Translates to: FISIFLTYNIWHSVLPCIESKET*VPVPAL
Trigger: TAGAGCTGGGACTGGAACCCAGGTTTCCTTACTCTC...AATACATGGCAGAACGCTGTGCCAAATGTTATAGGTAAGGAATATAGAAATGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR CCA 90 bp TCATTTCTATATTCCTTACCTATAACATTTGGCACAGCGTTCTGCCATGTATTGGCCATTCATCACAGATaGACCTCCATTCCTGGATTC +
Preference number: 4 (lower is better)
Translates to: SFLYSLPITFGTAFCHVLAIHHR*TSIPGF
Trigger: GAATCCAGGAATGGAGGTCCATCTGTGATGAATGGC...CAATACATGGCAGAACGCTGTGCCAAATGTTATAGGTAAGGAATATAGAAATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR CCA 90 bp AATGGCTTTCAGTTCCATCCATGTCCCATAAAGATCAGGTCCATGAGGAGTAAAATAAGTGAGAAGATGTaGTGTTTGGTTTTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: NGFQFHPCPIKIRSMRSKISEKM*CLVFCS
Trigger: GGAGCAGAAAACCAAACACCACATCTTCTCACTTAT...TTTACTCCTCATGGACCTGATCTTTATGGGACATGGATGGAACTGAAAGCCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618252.1
CDS-3UTR TCA 90 bp AGTAAAGACATTATACAAAACAATGTTGAGTGGTGCAATCACCAACTTCCCATAAATAGTAGCTGTCAATaGCCACCACAGGCACCAGAA +
Preference number: 4 (lower is better)
Translates to: SKDIIQNNVEWCNHQLPINSSCQ*PPQAPE
Trigger: TTCTGGTGCCTGTGGTGGTCATTGACAGCTACTATT...TATGGGAAGTTGGTGATTGCACCACTCAACATTGTTTTGTATAATGTCTTTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613181.4
ENST00000618252.1
ENST00000619129.4
CDS-3UTR TCA 90 bp TATTCATGTCAGAAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAAAAGGTTTTGGTAACTaGCCTCTGAACTCTGATGGA +
Preference number: 4 (lower is better)
Translates to: YSCQKTFITNVTGDDLQGKGFGN*PLNSDG
Trigger: TCCATCAGAGTTCAGAGGTCAGTTACCAAAACCTTT...TCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTTCTGACATGAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR GCA 90 bp GACATTATACAAAACAATGTTGAGTGGTGCAATCACCAACTTCCCATAATAGTAAGTAGATCCTTCAGGTaGCCAGACTTGTCCTGCTTT +
Preference number: 4 (lower is better)
Translates to: DIIQNNVEWCNHQLPIIVSRSFR*PDLSCF
Trigger: AAAGCAGGACAAGTCTGGGCACCTGAAGGATCTACT...TACTATTATGGGAAGTTGGTGATTGCACCACTCAACATTGTTTTGTATAATGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613181.4
ENST00000618252.1
CDS-3UTR GCA 90 bp AGTAAAGACATTATACAAAACAATGTTGAGTGGTGCAATCACCAACTTCCCATAGGAGCGAATGGCATATaGTGGGGAATATTCCCAAGT +
Preference number: 4 (lower is better)
Translates to: SKDIIQNNVEWCNHQLPIGANGI*WGIFPS
Trigger: ACTTGGGAATATTCCCCAGCATATGCCATTCGCTCC...TATGGGAAGTTGGTGATTGCACCACTCAACATTGTTTTGTATAATGTCTTTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613181.4
ENST00000618252.1
ENST00000619129.4
CDS-3UTR GCA 90 bp CAGAAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCAGCTTTAACACTTTACTaGTTCCTGATTTCATTTGCA +
Preference number: 4 (lower is better)
Translates to: QKTFITNVTGDDLQGVRSALTLY*FLISFA
Trigger: TGCAAATGAAATCAGGAAGCAGTAAAGTGTTAAAGC...TGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTTCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616540.5
CDS-3UTR CCA 90 bp GACATTATACAAAACAATGTTGAGTGGTGCAATCACCAACTTCCCATAATAGTAGCGAATGGCATATGCTaGGGAATATTCCCAAGTCTG +
Preference number: 4 (lower is better)
Translates to: DIIQNNVEWCNHQLPIIVANGIC*GIFPSL
Trigger: CAGACTTGGGAATATTCCCCAGCATATGCCATTCGC...TACTATTATGGGAAGTTGGTGATTGCACCACTCAACATTGTTTTGTATAATGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613181.4
ENST00000618252.1
ENST00000619129.4
CDS-3UTR CCA 90 bp CAAGTAATGTTTTCATGGTTGAGTGAGGAATATGGAGGAGCAATAGATGAGAGTAAGCATAGGAGCGAATaGCATATGCTGGGGAATATT +
Preference number: 4 (lower is better)
Translates to: QVMFSWLSEEYGGAIDESKHRSE*HMLGNI
Trigger: AATATTCCCCAGCATATGCCATTCGCTCCTATGCTT...ACTCTCATCTATTGCTCCTCCATATTCCTCACTCAACCATGAAAACATTACTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616540.5
CDS-3UTR CCA 90 bp ACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAATCCATTCTTCTTTATTaGATGAATATTTTGGCTCCC +
Preference number: 4 (lower is better)
Translates to: TFITNVTGDDLQGVRSLESILLY*MNILAP
Trigger: GGGAGCCAAAATATTCATCCAATAAAGAAGAATGGA...TTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR CCA 90 bp AATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAATCAATAGTTAACTCCATTCTTCTTTATTaGATGAATATTTTGGCTCCC +
Preference number: 4 (lower is better)
Translates to: NVTGDDLQGVRSLESIVNSILLY*MNILAP
Trigger: GGGAGCCAAAATATTCATCCAATAAAGAAGAATGGA...GTTAACTATTGATTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR CCA 90 bp TATTCCTGCAGAGGAGATCTCAAAGAGGAGCTTTTTAATATTGTAACTAGCCATAAAGGACATGTGGGTTaGCAACTAGGCTGTGTTCAT +
Preference number: 4 (lower is better)
Translates to: YSCRGDLKEELFNIVTSHKGHVG*QLGCVH
Trigger: ATGAACACAGCCTAGTTGCCAACCCACATGTCCTTT...ATGGCTAGTTACAATATTAAAAAGCTCCTCTTTGAGATCTCCTCTGCAGGAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR CCA 90 bp TTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAATCAAAATAGTACTGATATTTaGATCCTGTGTGGCTGCAAA +
Preference number: 4 (lower is better)
Translates to: LLQMLQAMTCRESGHWNQNSTDI*ILCGCK
Trigger: TTTGCAGCCACACAGGATCCAAATATCAGTACTATT...TTGATTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616540.5
CDS-3UTR CCA 90 bp TGTGTTCTCATCGTTCAGCTCCCATTTATAAGTGAGAAGATGTGGTGTTTGGTTAGAAGATGTGGTGTTTaGTTTTCTGCTCCTGTGTTA +
Preference number: 4 (lower is better)
Translates to: CVLIVQLPFISEKMWCLVRRCGV*FSAPVL
Trigger: TAACACAGGAGCAGAAAACCAAACACCACATCTTCT...AACCAAACACCACATCTTCTCACTTATAAATGGGAGCTGAACGATGAGAACACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618252.1
CDS-3UTR CCA 90 bp GACATTATACAAAACAATGTTGAGTGGTGCAATCACCAACTTCCCATAATAGTAGGTAAACTTGAGCCATaGTGGTTTGCTGCACAGATC +
Preference number: 4 (lower is better)
Translates to: DIIQNNVEWCNHQLPIIVGKLEP*WFAAQI
Trigger: GATCTGTGCAGCAAACCACCATGGCTCAAGTTTACC...TACTATTATGGGAAGTTGGTGATTGCACCACTCAACATTGTTTTGTATAATGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618252.1
CDS-3UTR TCA 90 bp GTTCTCATCGTTCAGCTCCCATTTATAAGTGAGAAGATGTGGTGTTTGGTTTTCTATACAAAACAATGTTaGGTGGTGCAATCACCAACT +
Preference number: 4 (lower is better)
Translates to: VLIVQLPFISEKMWCLVFYTKQC*VVQSPT
Trigger: AGTTGGTGATTGCACCACTCAACATTGTTTTGTATA...GAAAACCAAACACCACATCTTCTCACTTATAAATGGGAGCTGAACGATGAGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618252.1
CDS-3UTR TCA 90 bp TCATTTCTATATTCCTTACCTATAACATTTGGCACAGCGTTCTGCCATGTATTGGCTATAAATATACACTaGTCCTTTTCACTGGGGGTG +
Preference number: 4 (lower is better)
Translates to: SFLYSLPITFGTAFCHVLAINIH*SFSLGV
Trigger: CACCCCCAGTGAAAAGGATCAGTGTATATTTATAGC...CAATACATGGCAGAACGCTGTGCCAAATGTTATAGGTAAGGAATATAGAAATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR TCA 90 bp CCATGTATTGTGCTCTCACTAAAGACATACATAGAACAGAGAGATCCAAAATCAGTTTTCATGGTTGAGTaGGGAATATGGAGGAGCAAT +
Preference number: 4 (lower is better)
Translates to: PCIVLSLKTYIEQRDPKSVFMVE*GIWRSN
Trigger: ATTGCTCCTCCATATTCCTCACTCAACCATGAAAAC...TGATTTTGGATCTCTCTGTTCTATGTATGTCTTTAGTGAGAGCACAATACATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR TCA 90 bp TTCATTTCTATATTCCTTACCTATAACATTTGGCACAGCGTTCTGCCATGTATTAATACAAAAATTAGCTaGGTGCGGTGGTGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: FISIFLTYNIWHSVLPCINTKIS*VRWWCV
Trigger: CACACACCACCACCGCACTCAGCTAATTTTTGTATT...AATACATGGCAGAACGCTGTGCCAAATGTTATAGGTAAGGAATATAGAAATGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR TCA 90 bp CCATGTATTGTGCTCTCACTAAAGACATACATAGAACAGAGAGATCCAAAATCAGCAAAACACAATAAATaGTTGCCACTGGAGCTTTGC +
Preference number: 4 (lower is better)
Translates to: PCIVLSLKTYIEQRDPKSAKHNK*LPLELC
Trigger: GCAAAGCTCCAGTGGCAATCATTTATTGTGTTTTGC...TGATTTTGGATCTCTCTGTTCTATGTATGTCTTTAGTGAGAGCACAATACATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR GCA 90 bp AGTAAAGACATTATACAAAACAATGTTGAGTGGTGCAATCACCAACTTCCCATAATCATTCGACTCACGTaGAACCCAAACTTCTTGCAC +
Preference number: 4 (lower is better)
Translates to: SKDIIQNNVEWCNHQLPIIIRLT*NPNFLH
Trigger: GTGCAAGAAGTTTGGGTTGCACGTGAGTCGAATGAT...TATGGGAAGTTGGTGATTGCACCACTCAACATTGTTTTGTATAATGTCTTTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613181.4
ENST00000618252.1
ENST00000619129.4
CDS-3UTR CCA 90 bp TCATGTCAGAAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCTCCATTCTTCTTTATTaGATGAATATTTTGGCTCCC +
Preference number: 4 (lower is better)
Translates to: SCQKTFITNVTGDDLQGVSILLY*MNILAP
Trigger: GGGAGCCAAAATATTCATCCAATAAAGAAGAATGGA...GACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTTCTGACATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR CCA 90 bp CCATGTATTGTGCTCTCACTAAAGACATACATAGAACAGAGAGATCCAAAATCAAGAAGCATCAAGGAATaGTCTATAGGCCAAGCTGAT +
Preference number: 4 (lower is better)
Translates to: PCIVLSLKTYIEQRDPKSRSIKE*SIGQAD
Trigger: ATCAGCTTGGCCTATAGACCATTCCTTGATGCTTCT...TGATTTTGGATCTCTCTGTTCTATGTATGTCTTTAGTGAGAGCACAATACATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR CCA 90 bp ATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAATCAATACAAGTAATGTTTTCATaGTTGAGTGAGGAATATGGA +
Preference number: 4 (lower is better)
Translates to: ITNVTGDDLQGVRSLESIQVMFS*LSEEYG
Trigger: TCCATATTCCTCACTCAACCATGAAAACATTACTTG...TATTGATTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616540.5
CDS-3UTR CCA 90 bp CAATATCAGTTAGGTCTCTGGTTAACCTCATCAGTCCTTTCAAGTAATGTTTTCCTTACCTATAACATTTaGCACAGCGTTCTGCCATGT +
Preference number: 4 (lower is better)
Translates to: QYQLGLWLTSSVLSSNVFLTYNI*HSVLPC
Trigger: ACATGGCAGAACGCTGTGCCAAATGTTATAGGTAAG...GAAAACATTACTTGAAAGGACTGATGAGGTTAACCAGAGACCTAACTGATATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR CCA 90 bp ATCTATCTGTGCTTTAGGGCCTTTCTCTGCCTAGCTGCAAAAAGTTTACATGCACTAGAACTCCAAAGTTaGAAAAATGACCCAGATAAA +
Preference number: 4 (lower is better)
Translates to: IYLCFRAFLCLAAKSLHALELQS*KNDPDK
Trigger: TTTATCTGGGTCATTTTTCCAACTTTGGAGTTCTAG...TGCATGTAAACTTTTTGCAGCTAGGCAGAGAAAGGCCCTAAAGCACAGATAGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000616540.5
CDS-3UTR TCA 90 bp CCATGTATTGTGCTCTCACTAAAGACATACATAGAACAGAGAGATCCAAAATCATGTAGTTTTGTCTGTTaGTATCTTCACATGGAGGAG +
Preference number: 4 (lower is better)
Translates to: PCIVLSLKTYIEQRDPKSCSFVC*YLHMEE
Trigger: CTCCTCCATGTGAAGATATCAACAGACAAAACTACA...TGATTTTGGATCTCTCTGTTCTATGTATGTCTTTAGTGAGAGCACAATACATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR TCA 90 bp TTCATTTCTATATTCCTTACCTATAACATTTGGCACAGCGTTCTGCCATGTATTAAGTGCCTTGTAAACTaGAGTACTGACTGTAAAGGC +
Preference number: 4 (lower is better)
Translates to: FISIFLTYNIWHSVLPCIKCLVN*STDCKG
Trigger: GCCTTTACAGTCAGTACTTCAGTTTACAAGGCACTT...AATACATGGCAGAACGCTGTGCCAAATGTTATAGGTAAGGAATATAGAAATGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR GCA 90 bp TTCATTTCTATATTCCTTACCTATAACATTTGGCACAGCGTTCTGCCATGTATTCTTTTCTTCCTGATTTaGTTTGCTTTCCGGGGTTTG +
Preference number: 4 (lower is better)
Translates to: FISIFLTYNIWHSVLPCILFFLI*FAFRGL
Trigger: CAAACCCCGGAAAGCAAAGCAAATCAGGAAGAAAAG...AATACATGGCAGAACGCTGTGCCAAATGTTATAGGTAAGGAATATAGAAATGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR GCA 90 bp TTCATTTCTATATTCCTTACCTATAACATTTGGCACAGCGTTCTGCCATGTATTGGGATAAAAATCACCTaGCTTGTCTACCACATGTTG +
Preference number: 4 (lower is better)
Translates to: FISIFLTYNIWHSVLPCIGIKIT*LVYHML
Trigger: CAACATGTGGTAGACAAGGCAGGTGATTTTTATCCC...AATACATGGCAGAACGCTGTGCCAAATGTTATAGGTAAGGAATATAGAAATGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR GCA 90 bp CAATATCAGTTAGGTCTCTGGTTAACCTCATCAGTCCTTTCAAGTAATGTTTTCAATAAGTATCTTGCATaGTTCCTCCTTTTGGCAAGC +
Preference number: 4 (lower is better)
Translates to: QYQLGLWLTSSVLSSNVFNKYLA*FLLLAS
Trigger: GCTTGCCAAAAGGAGGAAGCATGCAAGATACTTATT...GAAAACATTACTTGAAAGGACTGATGAGGTTAACCAGAGACCTAACTGATATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR CCA 90 bp TATTCCTGCAGAGGAGATCTCAAAGAGGAGCTTTTTAATATTGTAACTAGCCATAATTCGGTAAAATTCTaGATACAAATCAAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: YSCRGDLKEELFNIVTSHNSVKF*IQIKGP
Trigger: GGGCCCCTTGATTTGTATCCAGAATTTTACCGAATT...ATGGCTAGTTACAATATTAAAAAGCTCCTCTTTGAGATCTCCTCTGCAGGAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR CCA 90 bp TATTCCTGCAGAGGAGATCTCAAAGAGGAGCTTTTTAATATTGTAACTAGCCATTATTTGGATCCTGTGTaGCTGCAAAAGAACATGACT +
Preference number: 4 (lower is better)
Translates to: YSCRGDLKEELFNIVTSHYLDPV*LQKNMT
Trigger: AGTCATGTTCTTTTGCAGCCACACAGGATCCAAATA...ATGGCTAGTTACAATATTAAAAAGCTCCTCTTTGAGATCTCCTCTGCAGGAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR TCA 90 bp TCATTTCTATATTCCTTACCTATAACATTTGGCACAGCGTTCTGCCATGTATTGTATACAAAACAATGTTaGGTGGTGCAATCACCAACT +
Preference number: 4 (lower is better)
Translates to: SFLYSLPITFGTAFCHVLYTKQC*VVQSPT
Trigger: AGTTGGTGATTGCACCACTCAACATTGTTTTGTATA...CAATACATGGCAGAACGCTGTGCCAAATGTTATAGGTAAGGAATATAGAAATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616540.5
CDS-3UTR CCA 90 bp CAATATATCTATCTGTGCTTTAGGGCCTTTCTCTGCCTAGCTGCAAAAAGTTTAGCTTTAATATGCTTGTaGAGGCCAAGATTAAATTGT +
Preference number: 4 (lower is better)
Translates to: QYIYLCFRAFLCLAAKSLALICL*RPRLNC
Trigger: ACAATTTAATCTTGGCCTCCACAAGCATATTAAAGC...TAAACTTTTTGCAGCTAGGCAGAGAAAGGCCCTAAAGCACAGATAGATATATTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616540.5
CDS-3UTR GCA 90 bp CCATGTATTGTGCTCTCACTAAAGACATACATAGAACAGAGAGATCCAAAATCAGCTTTAACACTTTACTaGTTCCTGATTTCATTTGCA +
Preference number: 4 (lower is better)
Translates to: PCIVLSLKTYIEQRDPKSALTLY*FLISFA
Trigger: TGCAAATGAAATCAGGAAGCAGTAAAGTGTTAAAGC...TGATTTTGGATCTCTCTGTTCTATGTATGTCTTTAGTGAGAGCACAATACATGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR CCA 90 bp CAATATCAGTTAGGTCTCTGGTTAACCTCATCAGTCCTTTCAAGTAATGTTTTCGTTGATATCTTCACATaGAGGAGTCTAGAATTCAAA +
Preference number: 4 (lower is better)
Translates to: QYQLGLWLTSSVLSSNVFVDIFT*RSLEFK
Trigger: TTTGAATTCTAGACTCCTCCATGTGAAGATATCAAC...GAAAACATTACTTGAAAGGACTGATGAGGTTAACCAGAGACCTAACTGATATTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR CCA 90 bp TATTCCTGCAGAGGAGATCTCAAAGAGGAGCTTTTTAATATTGTAACTAGCCATGTTGATATCTTCACATaGAGGAGTCTAGAATTCAAA +
Preference number: 4 (lower is better)
Translates to: YSCRGDLKEELFNIVTSHVDIFT*RSLEFK
Trigger: TTTGAATTCTAGACTCCTCCATGTGAAGATATCAAC...ATGGCTAGTTACAATATTAAAAAGCTCCTCTTTGAGATCTCCTCTGCAGGAATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
3UTR CAA 72 bp TGTGCTAGTTTTACACTGGAAAATAGTAATCAAGAATaGAGAATTAAATGCCAGAGATCTTTCAAGCAAGGG +
Preference number: 4 (lower is better)
Translates to: CASFTLENSNQE*RIKCQRSFKQG
Trigger: CCCTTGCTTGAAAGATCTCTGGCATTTAATTCTCAATTCTTGATTACTATTTTCCAGTGTAAAACTAGCACA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR GCA 90 bp GACATTATACAAAACAATGTTGAGTGGTGCAATCACCAACTTCCCATAATAGTAATATTAAGCCCAGCATaGATTAGCTATTATCCTGAT +
Preference number: 4 (lower is better)
Translates to: DIIQNNVEWCNHQLPIIVILSPA*ISYYPD
Trigger: ATCAGGATAATAGCTAATGCATGCTGGGCTTAATAT...TACTATTATGGGAAGTTGGTGATTGCACCACTCAACATTGTTTTGTATAATGTC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618252.1
CDS GCA 90 bp TCCCAGATAACTCGGTCCGGTGCTCCGCGCCGCCCGCCTCTCGGCTaGCCAGCAGCTCCCGCAGCTTGTCCGCAGCCGGGGCCGTATCCC +
Preference number: 5 (lower is better)
Translates to: SQITRSGAPRRPPLG*PAAPAACPQPGPYP
Trigger: GGGATACGGCCCCGGCTGCGGACAAGCTGCGGGAGCTGCTGGGCAGCCGAGAGGCGGGCGGCGCGGAGCACCGGACCGAGTTATCTGGGA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000612489.1
ENST00000613181.4
ENST00000614444.4
ENST00000616540.5
ENST00000618252.1
CDS TCA 90 bp CATATGCTGGGGAATATTCCCAAGTCTGAAACCCTTCCCCATAGATaGGGTAGTGTGTTCGGTCCGGTGCTCCGCGCCGCCCGCCTCTCG +
Preference number: 5 (lower is better)
Translates to: HMLGNIPKSETLPHR*GSVFGPVLRAARLS
Trigger: CGAGAGGCGGGCGGCGCGGAGCACCGGACCGAACACACTACCTCATCTATGGGGAAGGGTTTCAGACTTGGGAATATTCCCCAGCATATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619129.4
CDS-3UTR CAA 90 bp CAAAACATGCCAGTGCTGAGAACCAAGAAGGCTAGCATCATTCGACTCACGTGCAGCAGCTCCCGCAGCTaGTCCGCAGCCGGGGCCGTA +
Preference number: 5 (lower is better)
Translates to: QNMPVLRTKKASIIRLTCSSSRS*SAAGAV
Trigger: TACGGCCCCGGCTGCGGACAAGCTGCGGGAGCTGCT...GCACGTGAGTCGAATGATGCTAGCCTTCTTGGTTCTCAGCACTGGCATGTTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612489.1
ENST00000619129.4
CDS-3UTR CAA 90 bp CCCAGCACAGCAATGGAAGTCTTGTCCATATACCATCCAGTCATGGCTATCAACAGCAGCTCCCGCAGCTaGTCCGCAGCCGGGGCCGTA +
Preference number: 5 (lower is better)
Translates to: PSTAMEVLSIYHPVMAINSSSRS*SAAGAV
Trigger: TACGGCCCCGGCTGCGGACAAGCTGCGGGAGCTGCT...GTTGATAGCCATGACTGGATGGTATATGGACAAGACTTCCATTGCTGTGCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612489.1
ENST00000613181.4
ENST00000619129.4
CDS-3UTR CAA 90 bp AGAGGTTGCAGTGAGCTGAGGTCGTGCCATTGTGTTCCAACCTGGGCGACAGAGGTTACAGGCGATGACTaGCAGGGAGTCAGGTCACTG +
Preference number: 5 (lower is better)
Translates to: RGCSELRSCHCVPTWATEVTGDD*QGVRSL
Trigger: CAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAAC...CTCTGTCGCCCAGGTTGGAACACAATGGCACGACCTCAGCTCACTGCAACCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616540.5
CDS-3UTR CAA 90 bp TGTCTACCACATGTTGTGACTGTGAGGATCAAACGAGATGCTGTGAAAGTGCCTAGCAGCTCCCGCAGCTaGTCCGCAGCCGGGGCCGTA +
Preference number: 5 (lower is better)
Translates to: CLPHVVTVRIKRDAVKVPSSSRS*SAAGAV
Trigger: TACGGCCCCGGCTGCGGACAAGCTGCGGGAGCTGCT...AGGCACTTTCACAGCATCTCGTTTGATCCTCACAGTCACAACATGTGGTAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616540.5
CDS-3UTR CAA 90 bp TACCATCCAGTCATGGCTATCAACGTAGTGTACATACAGAAGCTACTAGGAAGGAGCAGCTCCCGCAGCTaGTCCGCAGCCGGGGCCGTA +
Preference number: 5 (lower is better)
Translates to: YHPVMAINVVYIQKLLGRSSSRS*SAAGAV
Trigger: TACGGCCCCGGCTGCGGACAAGCTGCGGGAGCTGCT...CCTTCCTAGTAGCTTCTGTATGTACACTACGTTGATAGCCATGACTGGATGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612489.1
ENST00000619129.4
CDS-3UTR CAA 90 bp AGAAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACAGCAGCTCCCGCAGCTaGTCCGCAGCCGGGGCCGTA +
Preference number: 5 (lower is better)
Translates to: RRPLLQMLQAMTCRESGHSSSRS*SAAGAV
Trigger: TACGGCCCCGGCTGCGGACAAGCTGCGGGAGCTGCT...GTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR CAA 90 bp GTCAGGCTGCATCACACAGCACTGCTGTGCTGGTCTAACACACAGGCAGACTGGGCATGCTTCCTCCTTTaGGCAAGCAGAACAGTCAGT +
Preference number: 5 (lower is better)
Translates to: VRLHHTALLCWSNTQADWACFLL*ASRTVS
Trigger: ACTGACTGTTCTGCTTGCCAAAAGGAGGAAGCATGC...CCAGTCTGCCTGTGTGTTAGACCAGCACAGCAGTGCTGTGTGATGCAGCCTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR CAA 90 bp AATGGCTTTCAGTTCCATCCATGTCCCATAAAGATCAGGTCCATGAGGAGTAAAAGCAGCTCCCGCAGCTaGTCCGCAGCCGGGGCCGTA +
Preference number: 5 (lower is better)
Translates to: NGFQFHPCPIKIRSMRSKSSSRS*SAAGAV
Trigger: TACGGCCCCGGCTGCGGACAAGCTGCGGGAGCTGCT...TTTACTCCTCATGGACCTGATCTTTATGGGACATGGATGGAACTGAAAGCCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618252.1
CDS-3UTR CAA 90 bp GTCAGGCTGCATCACACAGCACTGCTGTGCTGGTCTAACACACAGGCAGACTGGCAGAGAACCATGCATTaGCCAAGTATACCTACTCCC +
Preference number: 5 (lower is better)
Translates to: VRLHHTALLCWSNTQADWQRTMH*PSIPTP
Trigger: GGGAGTAGGTATACTTGGCAAATGCATGGTTCTCTG...CCAGTCTGCCTGTGTGTTAGACCAGCACAGCAGTGCTGTGTGATGCAGCCTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR CAA 90 bp AGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGCGCGCAGACATAGCTTaGGCTGGCAAACGGTGTCCG +
Preference number: 5 (lower is better)
Translates to: RPLLQMLQAMTCRESGHWRADIA*AGKRCP
Trigger: CGGACACCGTTTGCCAGCCAAAGCTATGTCTGCGCG...CCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616540.5
CDS CCA 90 bp ATGCAGCTGGCCAGGCATGAAGCAACAGGTAAGCATAGGAGCGAATaGCATATGCTGGGGAATATTCCCAAGTCTGAAACCCTTCCCCAT +
Preference number: 5 (lower is better)
Translates to: MQLARHEATGKHRSE*HMLGNIPKSETLPH
Trigger: ATGGGGAAGGGTTTCAGACTTGGGAATATTCCCCAGCATATGCCATTCGCTCCTATGCTTACCTGTTGCTTCATGCCTGGCCAGCTGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000398006.6
ENST00000530851.6
ENST00000531154.5
ENST00000612489.1
ENST00000613181.4
ENST00000614444.4
ENST00000616540.5
ENST00000618252.1
ENST00000619129.4
CDS-3UTR CAA 90 bp TCACTGGAATCAATAGTTAACAAGATGGTTGTCCTTTGGGGCCACAGGTGTGTTAGAGGTGATGGCGGGTaGGATGGGCCCAGTAAAGGG +
Preference number: 5 (lower is better)
Translates to: SLESIVNKMVVLWGHRCVRGDGG*DGPSKG
Trigger: CCCTTTACTGGGCCCATCCAACCCGCCATCACCTCT...AACACACCTGTGGCCCCAAAGGACAACCATCTTGTTAACTATTGATTCCAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398006.6
CDS-3UTR CAA 90 bp ATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAATCAATATGCAGCCTCCAGGGTTaGGGAAGAGGTGATGGCGGG +
Preference number: 5 (lower is better)
Translates to: ITNVTGDDLQGVRSLESICSLQG*GRGDGG
Trigger: CCCGCCATCACCTCTTCCCAAACCCTGGAGGCTGCA...TATTGATTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398006.6
CDS-3UTR CAA 90 bp AATGGTCACCTTTTTCCTGAGATAGCTCCAGGACAGGGTCCTAGTCCTGTGAAGTTCAGGTGCCCAGACTaGTCCTGCTTTGTTCCCAGA +
Preference number: 5 (lower is better)
Translates to: NGHLFPEIAPGQGPSPVKFRCPD*SCFVPR
Trigger: TCTGGGAACAAAGCAGGACAAGTCTGGGCACCTGAA...CTTCACAGGACTAGGACCCTGTCCTGGAGCTATCTCAGGAAAAAGGTGACCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616540.5
CDS-3UTR CAA 90 bp CAGGGAGTCAGGTCACTGGAATCAATAGTTAACAAGATGGTTGTCCTTTGGGGCCAAGATGGTTGTCCTTaGGGGCCACAGGTGTGTTGC +
Preference number: 5 (lower is better)
Translates to: QGVRSLESIVNKMVVLWGQDGCP*GPQVCC
Trigger: GCAACACACCTGTGGCCCCAAAGGACAACCATCTTG...GCCCCAAAGGACAACCATCTTGTTAACTATTGATTCCAGTGACCTGACTCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000398006.6
ENST00000524671.1
ENST00000525910.1
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR CAA 90 bp GCCACAGGTGTGTTGCTAACCTCCACTTTTCTTCCTGATTTGCTTTGCTTTCCGGTTACAGGCGATGACTaGCAGGGAGTCAGGTCACTG +
Preference number: 5 (lower is better)
Translates to: ATGVLLTSTFLPDLLCFPVTGDD*QGVRSL
Trigger: CAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAAC...CGGAAAGCAAAGCAAATCAGGAAGAAAAGTGGAGGTTAGCAACACACCTGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000524671.1
ENST00000525910.1
ENST00000619129.4
CDS-3UTR CAA 90 bp GTCAGGTCACTGGAATCAATAGTTAACAAGATGGTTGTCCTTTGGGGCCACAGGGCTGAAGCAGGAGAATaGCTTGAACCCGGGAGACAG +
Preference number: 5 (lower is better)
Translates to: VRSLESIVNKMVVLWGHRAEAGE*LEPGRQ
Trigger: CTGTCTCCCGGGTTCAAGCAATTCTCCTGCTTCAGC...CCTGTGGCCCCAAAGGACAACCATCTTGTTAACTATTGATTCCAGTGACCTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616540.5
CDS-3UTR CAA 90 bp GTAAACTTGAGCCATGGTGGTTTGCTGCACAGATCAACCCATCACCTAGATATTAGGCCCCAGTGTATGTaGCTCCCCTCCCTGTGTCCA +
Preference number: 5 (lower is better)
Translates to: VNLSHGGLLHRSTHHLDIRPQCM*LPSLCP
Trigger: TGGACACAGGGAGGGGAGCAACATACACTGGGGCCT...AATATCTAGGTGATGGGTTGATCTGTGCAGCAAACCACCATGGCTCAAGTTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618252.1
CDS GCA 90 bp TGGCCAGGCATGAAGCAACAGGTAAGCATAGGAGCGAATGGCATATaGTGGGGAATATTCCCAAGTCTGAAACCCTTCCCCATAGATGAG +
Preference number: 5 (lower is better)
Translates to: WPGMKQQVSIGANGI*WGIFPSLKPFPIDE
Trigger: CTCATCTATGGGGAAGGGTTTCAGACTTGGGAATATTCCCCAGCATATGCCATTCGCTCCTATGCTTACCTGTTGCTTCATGCCTGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000398006.6
ENST00000530723.1
ENST00000530851.6
ENST00000531154.5
ENST00000612489.1
ENST00000613181.4
ENST00000614444.4
ENST00000616540.5
ENST00000618252.1
ENST00000619129.4
CDS-3UTR CAA 90 bp AGAACCAAGAAGGCTAGCATCATTCGACTCACGTGCAACCCAAACTTCTTGCACTTCAGGTGCCCAGACTaGTCCTGCTTTGTTCCCAGA +
Preference number: 5 (lower is better)
Translates to: RTKKASIIRLTCNPNFLHFRCPD*SCFVPR
Trigger: TCTGGGAACAAAGCAGGACAAGTCTGGGCACCTGAA...GTGCAAGAAGTTTGGGTTGCACGTGAGTCGAATGATGCTAGCCTTCTTGGTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612489.1
CDS-3UTR CAA 90 bp ACTCCCAGCACAGCAATGGAAGTCTTGTCCATATACCATCCAGTCATGGCTATCTTCAGGTGCCCAGACTaGTCCTGCTTTGTTCCCAGA +
Preference number: 5 (lower is better)
Translates to: TPSTAMEVLSIYHPVMAIFRCPD*SCFVPR
Trigger: TCTGGGAACAAAGCAGGACAAGTCTGGGCACCTGAA...GATAGCCATGACTGGATGGTATATGGACAAGACTTCCATTGCTGTGCTGGGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612489.1
ENST00000613181.4
CDS-3UTR CAA 90 bp TGCAATCACCAACTTCCCATAATAGTAGCTGTCAATGACCACCACAGGCACCAGTTCAGGTGCCCAGACTaGTCCTGCTTTGTTCCCAGA +
Preference number: 5 (lower is better)
Translates to: CNHQLPIIVAVNDHHRHQFRCPD*SCFVPR
Trigger: TCTGGGAACAAAGCAGGACAAGTCTGGGCACCTGAA...CTGGTGCCTGTGGTGGTCATTGACAGCTACTATTATGGGAAGTTGGTGATTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613181.4
ENST00000618252.1
CDS-3UTR CAA 90 bp CCCCAGCTGCTACTCCCAGCACAGCAATGGAAGTCTTGTCCATATACCATCCAGACAGCAATGGAAGTCTaGTCCATATACCATCCAGTC +
Preference number: 5 (lower is better)
Translates to: PQLLLPAQQWKSCPYTIQTAMEV*SIYHPV
Trigger: GACTGGATGGTATATGGACAAGACTTCCATTGCTGT...CTGGATGGTATATGGACAAGACTTCCATTGCTGTGCTGGGAGTAGCAGCTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612489.1
ENST00000613181.4
ENST00000619129.4
CDS-3UTR CAA 90 bp TCCTTTGGGGCCACAGGTGTGTTGCTAACCTCCACTTTTCTTCCTGATTTGCTTGGGGCCACAGGTGTGTaGCTAACCTCCACTTTTCTT +
Preference number: 5 (lower is better)
Translates to: SFGATGVLLTSTFLPDLLGATGV*LTSTFL
Trigger: AAGAAAAGTGGAGGTTAGCAACACACCTGTGGCCCC...AAGCAAATCAGGAAGAAAAGTGGAGGTTAGCAACACACCTGTGGCCCCAAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000524671.1
ENST00000525910.1
ENST00000619129.4
CDS-3UTR CAA 90 bp AGGTCACTGGAATCAATAGTTAACAAGATGGTTGTCCTTTGGGGCCACAGGTGTCAAGATGGTTGTCCTTaGGGGCCACAGGTGTGTTGC +
Preference number: 5 (lower is better)
Translates to: RSLESIVNKMVVLWGHRCQDGCP*GPQVCC
Trigger: GCAACACACCTGTGGCCCCAAAGGACAACCATCTTG...ACACCTGTGGCCCCAAAGGACAACCATCTTGTTAACTATTGATTCCAGTGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000398006.6
ENST00000524671.1
ENST00000525910.1
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR CAA 90 bp GTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAATCAATAGTTAACAAGCAAGATGGTTGTCCTTaGGGGCCACAGGTGTGTTGC +
Preference number: 5 (lower is better)
Translates to: VTGDDLQGVRSLESIVNKQDGCP*GPQVCC
Trigger: GCAACACACCTGTGGCCCCAAAGGACAACCATCTTG...CTTGTTAACTATTGATTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000398006.6
ENST00000524671.1
ENST00000525910.1
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR CAA 90 bp GGTGTGTTGCTAACCTCCACTTTTCTTCCTGATTTGCTTTGCTTTCCGGGGTTTCAAGATGGTTGTCCTTaGGGGCCACAGGTGTGTTGC +
Preference number: 5 (lower is better)
Translates to: GVLLTSTFLPDLLCFPGFQDGCP*GPQVCC
Trigger: GCAACACACCTGTGGCCCCAAAGGACAACCATCTTG...AAACCCCGGAAAGCAAAGCAAATCAGGAAGAAAAGTGGAGGTTAGCAACACACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000524671.1
ENST00000525910.1
ENST00000619129.4
CDS-3UTR CAA 90 bp CTAGCATCATTCGACTCACGTGCAACCCAAACTTCTTGCACACAGCCTTGTAAACAAGATGGTTGTCCTTaGGGGCCACAGGTGTGTTGC +
Preference number: 5 (lower is better)
Translates to: LASFDSRATQTSCTQPCKQDGCP*GPQVCC
Trigger: GCAACACACCTGTGGCCCCAAAGGACAACCATCTTG...TTTACAAGGCTGTGTGCAAGAAGTTTGGGTTGCACGTGAGTCGAATGATGCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619129.4
CDS-3UTR CAA 90 bp AGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGGTTACAGGCGATGACTaGCAGGGAGTCAGGTCACTG +
Preference number: 5 (lower is better)
Translates to: RPLLQMLQAMTCRESGHWVTGDD*QGVRSL
Trigger: CAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAAC...CCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000398006.6
ENST00000524671.1
ENST00000525910.1
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR CAA 90 bp AGTTTACGTACACTGTATACTGATCTGACAGGAAGGGGACATAGAATGCCCGCAGTTACAGGCGATGACTaGCAGGGAGTCAGGTCACTG +
Preference number: 5 (lower is better)
Translates to: SLRTLYTDLTGRGHRMPAVTGDD*QGVRSL
Trigger: CAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAAC...TGCGGGCATTCTATGTCCCCTTCCTGTCAGATCAGTATACAGTGTACGTAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000524671.1
ENST00000525910.1
ENST00000619129.4
CDS-3UTR CAA 90 bp TTAGGTCACAGTTCCTCAAATGGTCACCTTTTTCCTGAGATAGCTCCAGGACAGGCTGAAGCAGGAGAATaGCTTGAACCCGGGAGACAG +
Preference number: 5 (lower is better)
Translates to: LGHSSSNGHLFPEIAPGQAEAGE*LEPGRQ
Trigger: CTGTCTCCCGGGTTCAAGCAATTCTCCTGCTTCAGC...CTGTCCTGGAGCTATCTCAGGAAAAAGGTGACCATTTGAGGAACTGTGACCTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR CAA 90 bp TCATTCGACTCACGTGCAACCCAAACTTCTTGCACACAGCCTTGTAAAAGTAAACGCGCAGACATAGCTTaGGCTGGCAAACGGTGTCCG +
Preference number: 5 (lower is better)
Translates to: SFDSRATQTSCTQPCKSKRADIA*AGKRCP
Trigger: CGGACACCGTTTGCCAGCCAAAGCTATGTCTGCGCG...TTTACTTTTACAAGGCTGTGTGCAAGAAGTTTGGGTTGCACGTGAGTCGAATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612489.1
CDS-3UTR CAA 90 bp AAGAGCCCAAACAGGAAGACAGTTCCTAATGCCAGCCAATTCGATGTCACAGTAATGCCCGCAGCAGCTTaGAAGATCCCAGTCAAGGAG +
Preference number: 5 (lower is better)
Translates to: KSPNRKTVPNASQFDVTVMPAAA*KIPVKE
Trigger: CTCCTTGACTGGGATCTTCAAAGCTGCTGCGGGCAT...TACTGTGACATCGAATTGGCTGGCATTAGGAACTGTCTTCCTGTTTGGGCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619129.4
CDS CCA 90 bp CCAGGCATGAAGCAACAGGTAAGCATAGGAGCGAATGGCATATGCTaGGGAATATTCCCAAGTCTGAAACCCTTCCCCATAGATGAGGTA +
Preference number: 5 (lower is better)
Translates to: PGMKQQVSIGANGIC*GIFPSLKPFPIDEV
Trigger: TACCTCATCTATGGGGAAGGGTTTCAGACTTGGGAATATTCCCCAGCATATGCCATTCGCTCCTATGCTTACCTGTTGCTTCATGCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000398006.6
ENST00000530723.1
ENST00000530851.6
ENST00000531154.5
ENST00000612489.1
ENST00000613181.4
ENST00000614444.4
ENST00000616540.5
ENST00000618252.1
ENST00000619129.4
CDS CCA 90 bp TGCAGCCATGTGAGGATACAAGTCAGCTGTCTGCAGCCAGAAAGATaGCCTTTACCAGAACTTGACTATACTGGCATCGTGATCTTGGTC +
Preference number: 5 (lower is better)
Translates to: CSHVRIQVSCLQPER*PLPELDYTGIVILV
Trigger: GACCAAGATCACGATGCCAGTATAGTCAAGTTCTGGTAAAGGCCATCTTTCTGGCTGCAGACAGCTGACTTGTATCCTCACATGGCTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524671.1
CDS-3UTR CAA 90 bp GCTTTGGTGGAGAAGCCCATATGGCCTAAGAGAGGCTTGCTAGTTCTCAGATGCTATTGGATGAATATTTaGGCTCCCGGGGTGTTTCTC +
Preference number: 5 (lower is better)
Translates to: ALVEKPIWPKRGLLVLRCYWMNI*APGVFL
Trigger: GAGAAACACCCCGGGAGCCAAAATATTCATCCAATA...GCATCTGAGAACTAGCAAGCCTCTCTTAGGCCATATGGGCTTCTCCACCAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR CAA 90 bp GGATGGTGTAGTTTACGTACACTGTATACTGATCTGACAGGAAGGGGACATAGAGTTACAGGCGATGACTaGCAGGGAGTCAGGTCACTG +
Preference number: 5 (lower is better)
Translates to: GWCSLRTLYTDLTGRGHRVTGDD*QGVRSL
Trigger: CAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAAC...TCTATGTCCCCTTCCTGTCAGATCAGTATACAGTGTACGTAAACTACACCATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000524671.1
ENST00000525910.1
ENST00000619129.4
CDS-3UTR CAA 90 bp GTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAATCAATAGTTAACAAGATGCCCGCAGCAGCTTaGAAGATTTGGGAGACTGAG +
Preference number: 5 (lower is better)
Translates to: VTGDDLQGVRSLESIVNKMPAAA*KIWETE
Trigger: CTCAGTCTCCCAAATCTTCAAAGCTGCTGCGGGCAT...CTTGTTAACTATTGATTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525910.1
CDS-3UTR CAA 90 bp AGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGGTAAAGGGTCGGGACTaGAGGGAGAATAAAAGGAGC +
Preference number: 5 (lower is better)
Translates to: RPLLQMLQAMTCRESGHWVKGRD*RENKRS
Trigger: GCTCCTTTTATTCTCCCTCAAGTCCCGACCCTTTAC...CCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398006.6
CDS-3UTR CAA 90 bp AGAAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTTCAGGTGCCCAGACTaGTCCTGCTTTGTTCCCAGA +
Preference number: 5 (lower is better)
Translates to: RRPLLQMLQAMTCRESGHFRCPD*SCFVPR
Trigger: TCTGGGAACAAAGCAGGACAAGTCTGGGCACCTGAA...GTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
CDS-3UTR CAA 90 bp CAAAACATGCCAGTGCTGAGAACCAAGAAGGCTAGCATCATTCGACTCACGTGCACAGCAATGGAAGTCTaGTCCATATACCATCCAGTC +
Preference number: 5 (lower is better)
Translates to: QNMPVLRTKKASIIRLTCTAMEV*SIYHPV
Trigger: GACTGGATGGTATATGGACAAGACTTCCATTGCTGT...GCACGTGAGTCGAATGATGCTAGCCTTCTTGGTTCTCAGCACTGGCATGTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612489.1
ENST00000619129.4
CDS-3UTR CAA 90 bp TCACTGGAATCAATAGTTAACAAGATGGTTGTCCTTTGGGGCCACAGGTGTGTTGGGGCCACAGGTGTGTaGCTAACCTCCACTTTTCTT +
Preference number: 5 (lower is better)
Translates to: SLESIVNKMVVLWGHRCVGATGV*LTSTFL
Trigger: AAGAAAAGTGGAGGTTAGCAACACACCTGTGGCCCC...AACACACCTGTGGCCCCAAAGGACAACCATCTTGTTAACTATTGATTCCAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000398006.6
ENST00000524671.1
ENST00000525910.1
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR CAA 90 bp TTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAATCAACAAGATGGTTGTCCTTaGGGGCCACAGGTGTGTTGC +
Preference number: 5 (lower is better)
Translates to: LLQMLQAMTCRESGHWNQQDGCP*GPQVCC
Trigger: GCAACACACCTGTGGCCCCAAAGGACAACCATCTTG...TTGATTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000398006.6
ENST00000524671.1
ENST00000525910.1
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR CAA 90 bp TTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAATCAAGTTACAGGCGATGACTaGCAGGGAGTCAGGTCACTG +
Preference number: 5 (lower is better)
Translates to: LLQMLQAMTCRESGHWNQVTGDD*QGVRSL
Trigger: CAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAAC...TTGATTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000398006.6
ENST00000524671.1
ENST00000525910.1
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR CAA 90 bp TCATGTCAGAAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCGTTACAGGCGATGACTaGCAGGGAGTCAGGTCACTG +
Preference number: 5 (lower is better)
Translates to: SCQKTFITNVTGDDLQGVVTGDD*QGVRSL
Trigger: CAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAAC...GACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTTCTGACATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398006.6
ENST00000524671.1
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR CAA 90 bp ACAAGATGGTTGTCCTTTGGGGCCACAGGTGTGTTGCTAACCTCCACTTTTCTTATGCCCGCAGCAGCTTaGAAGATCTATGTGATGGTA +
Preference number: 5 (lower is better)
Translates to: TRWLSFGATGVLLTSTFLMPAAA*KIYVMV
Trigger: TACCATCACATAGATCTTCAAAGCTGCTGCGGGCAT...AAGAAAAGTGGAGGTTAGCAACACACCTGTGGCCCCAAAGGACAACCATCTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524671.1
CDS-3UTR CAA 90 bp AATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAATCAATAGTTAACTGGCCTAAGAGAGGCTaGCTAGTTCTCAGATGCCAG +
Preference number: 5 (lower is better)
Translates to: NVTGDDLQGVRSLESIVNWPKRG*LVLRCQ
Trigger: CTGGCATCTGAGAACTAGCAAGCCTCTCTTAGGCCA...GTTAACTATTGATTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616540.5
CDS-3UTR CAA 90 bp CAGGCCAGAGTGTGGAGAACAGCTTATCACAGCCATCCAGTACCAGGATTTTCATCAGCATCACAAGATTaGGGGATTCAGATAAGGCTG +
Preference number: 5 (lower is better)
Translates to: QARVWRTAYHSHPVPGFSSASQD*GIQIRL
Trigger: CAGCCTTATCTGAATCCCCAAATCTTGTGATGCTGA...TGAAAATCCTGGTACTGGATGGCTGTGATAAGCTGTTCTCCACACTCTGGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616540.5
CDS-3UTR CAA 90 bp AGAACCAAGAAGGCTAGCATCATTCGACTCACGTGCAACCCAAACTTCTTGCACAGCCTGGGCAACAAATaGAGACCTAGAAGCATCAAG +
Preference number: 5 (lower is better)
Translates to: RTKKASIIRLTCNPNFLHSLGNK*RPRSIK
Trigger: CTTGATGCTTCTAGGTCTCAATTTGTTGCCCAGGCT...GTGCAAGAAGTTTGGGTTGCACGTGAGTCGAATGATGCTAGCCTTCTTGGTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619129.4
CDS TCA 90 bp ACAAGTCAGCTGTCTGCAGCCAGAAAGATGGCCTTTACCAGAACTTaGCTATACTGGCATCGTGATCTTGGTCTTCCAGCCTTCAAAACT +
Preference number: 5 (lower is better)
Translates to: TSQLSAARKMAFTRT*LYWHRDLGLPAFKT
Trigger: AGTTTTGAAGGCTGGAAGACCAAGATCACGATGCCAGTATAGTCAAGTTCTGGTAAAGGCCATCTTTCTGGCTGCAGACAGCTGACTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524671.1
CDS TCA 90 bp TCAAAGGCAATGGGTAAACTGATGATGAGCAAAACATGCCAGTGCTaGGAACCAAGAAGGCTAGCATCATTCGACTCACGTGCAACCCAA +
Preference number: 5 (lower is better)
Translates to: SKAMGKLMMSKTCQC*EPRRLASFDSRATQ
Trigger: TTGGGTTGCACGTGAGTCGAATGATGCTAGCCTTCTTGGTTCTCAGCACTGGCATGTTTTGCTCATCATCAGTTTACCCATTGCCTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618252.1
CDS-3UTR CAA 90 bp ATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAATCAATATTCAGGTGCCCAGACTaGTCCTGCTTTGTTCCCAGA +
Preference number: 5 (lower is better)
Translates to: ITNVTGDDLQGVRSLESIFRCPD*SCFVPR
Trigger: TCTGGGAACAAAGCAGGACAAGTCTGGGCACCTGAA...TATTGATTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
CDS-3UTR CAA 90 bp TCATGTCAGAAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCTTCAGGTGCCCAGACTaGTCCTGCTTTGTTCCCAGA +
Preference number: 5 (lower is better)
Translates to: SCQKTFITNVTGDDLQGVFRCPD*SCFVPR
Trigger: TCTGGGAACAAAGCAGGACAAGTCTGGGCACCTGAA...GACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTTCTGACATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
CDS-3UTR CAA 90 bp GTCTTGCTGGAGGTGAAAAGGACATGTGGGTTGGCAACTAGGCTGTGTTCATTTACAGCAATGGAAGTCTaGTCCATATACCATCCAGTC +
Preference number: 5 (lower is better)
Translates to: VLLEVKRTCGLATRLCSFTAMEV*SIYHPV
Trigger: GACTGGATGGTATATGGACAAGACTTCCATTGCTGT...AAATGAACACAGCCTAGTTGCCAACCCACATGTCCTTTTCACCTCCAGCAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616540.5
CDS-3UTR CAA 90 bp GTCAGGTCACTGGAATCAATAGTTAACAAGATGGTTGTCCTTTGGGGCCACAGGCTCCAGGCGATATCGTaGAAACACAAAGTGGTAACA +
Preference number: 5 (lower is better)
Translates to: VRSLESIVNKMVVLWGHRLQAIS*KHKVVT
Trigger: TGTTACCACTTTGTGTTTCAACGATATCGCCTGGAG...CCTGTGGCCCCAAAGGACAACCATCTTGTTAACTATTGATTCCAGTGACCTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR CAA 90 bp GTCAGGTCACTGGAATCAATAGTTAACAAGATGGTTGTCCTTTGGGGCCACAGGTATTGGATGAATATTTaGGCTCCCGGGGTGTTTCTC +
Preference number: 5 (lower is better)
Translates to: VRSLESIVNKMVVLWGHRYWMNI*APGVFL
Trigger: GAGAAACACCCCGGGAGCCAAAATATTCATCCAATA...CCTGTGGCCCCAAAGGACAACCATCTTGTTAACTATTGATTCCAGTGACCTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR CAA 90 bp TTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAATCAAGGGGCCACAGGTGTGTaGCTAACCTCCACTTTTCTT +
Preference number: 5 (lower is better)
Translates to: LLQMLQAMTCRESGHWNQGATGV*LTSTFL
Trigger: AAGAAAAGTGGAGGTTAGCAACACACCTGTGGCCCC...TTGATTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000398006.6
ENST00000524671.1
ENST00000525910.1
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR CAA 90 bp TCATGTCAGAAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCGGGGCCACAGGTGTGTaGCTAACCTCCACTTTTCTT +
Preference number: 5 (lower is better)
Translates to: SCQKTFITNVTGDDLQGVGATGV*LTSTFL
Trigger: AAGAAAAGTGGAGGTTAGCAACACACCTGTGGCCCC...GACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTTCTGACATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000398006.6
ENST00000524671.1
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR CAA 90 bp TCAGAGAACCATGCATTTGCCAAGTATACCTACTCCCTCACTCACCCCATGATCAATTCTTCCTGTAAGTaGGTTCTGCTCTTCTCCGGT +
Preference number: 5 (lower is better)
Translates to: SENHAFAKYTYSLTHPMINSSCK*VLLFSG
Trigger: ACCGGAGAAGAGCAGAACCAACTTACAGGAAGAATT...GATCATGGGGTGAGTGAGGGAGTAGGTATACTTGGCAAATGCATGGTTCTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR CAA 90 bp CATGTCAGAAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAAGCTGCCAAACAGCTTaGGTGGAGAAGCCCATATGG +
Preference number: 5 (lower is better)
Translates to: HVRRPLLQMLQAMTCRESSCQTA*VEKPIW
Trigger: CCATATGGGCTTCTCCACCAAAGCTGTTTGGCAGCT...TGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTTCTGACATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616540.5
CDS-3UTR CAA 90 bp TGTCTACCACATGTTGTGACTGTGAGGATCAAACGAGATGCTGTGAAAGTGCCTAAAAGGACATGTGGGTaGGCAACTAGGCTGTGTTCA +
Preference number: 5 (lower is better)
Translates to: CLPHVVTVRIKRDAVKVPKRTCG*ATRLCS
Trigger: TGAACACAGCCTAGTTGCCAACCCACATGTCCTTTT...AGGCACTTTCACAGCATCTCGTTTGATCCTCACAGTCACAACATGTGGTAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR CAA 90 bp ACTGCTACTCTGAGCAGGTGTGTTGAAACTGTTTTTCCCAGGCAAAGCTATCCTAAAAGGACATGTGGGTaGGCAACTAGGCTGTGTTCA +
Preference number: 5 (lower is better)
Translates to: TATLSRCVETVFPRQSYPKRTCG*ATRLCS
Trigger: TGAACACAGCCTAGTTGCCAACCCACATGTCCTTTT...AGGATAGCTTTGCCTGGGAAAAACAGTTTCAACACACCTGCTCAGAGTAGCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR CAA 90 bp ATCTTTCAAGCAAGGGGGAGCCCAGTCTATCCTCACACACTCCCCAGTTATTGTAGAATGCCCTTCTCTTaGAAAATGAAAGATGGGGCT +
Preference number: 5 (lower is better)
Translates to: IFQARGSPVYPHTLPSYCRMPFS*KMKDGA
Trigger: AGCCCCATCTTTCATTTTCAAAGAGAAGGGCATTCT...ACAATAACTGGGGAGTGTGTGAGGATAGACTGGGCTCCCCCTTGCTTGAAAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR CAA 90 bp CATCATTCGACTCACGTGCAACCCAAACTTCTTGCACACAGCCTTGTAAAAGTACAGACTTGTCCTGCTTaGTTCCCAGATAACTCGGTC +
Preference number: 5 (lower is better)
Translates to: HHSTHVQPKLLAHSLVKVQTCPA*FPDNSV
Trigger: GACCGAGTTATCTGGGAACAAAGCAGGACAAGTCTG...TACTTTTACAAGGCTGTGTGCAAGAAGTTTGGGTTGCACGTGAGTCGAATGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612489.1
CDS-3UTR CAA 90 bp ACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAACAGACTTGTCCTGCTTaGTTCCCAGATAACTCGGTC +
Preference number: 5 (lower is better)
Translates to: TFITNVTGDDLQGVRSLEQTCPA*FPDNSV
Trigger: GACCGAGTTATCTGGGAACAAAGCAGGACAAGTCTG...TTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614444.4
ENST00000616540.5
CDS-3UTR CAA 90 bp AATCACCAACTTCCCATAATAGTAGCTGTCAATGACCACCACAGGCACCAGAAACAGACTTGTCCTGCTTaGTTCCCAGATAACTCGGTC +
Preference number: 5 (lower is better)
Translates to: NHQLPIIVAVNDHHRHQKQTCPA*FPDNSV
Trigger: GACCGAGTTATCTGGGAACAAAGCAGGACAAGTCTG...TTTCTGGTGCCTGTGGTGGTCATTGACAGCTACTATTATGGGAAGTTGGTGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613181.4
ENST00000618252.1
CDS-3UTR CAA 90 bp CTCTGCAGCAGGTATTCCATAAGAGAAGTCAGTGGTAGGACTAGGAGAGCCAAATGCAACCCAAACTTCTaGCACACAGCCCTTATTAGT +
Preference number: 5 (lower is better)
Translates to: LCSRYSIREVSGRTRRAKCNPNF*HTALIS
Trigger: ACTAATAAGGGCTGTGTGCAAGAAGTTTGGGTTGCA...TTTGGCTCTCCTAGTCCTACCACTGACTTCTCTTATGGAATACCTGCTGCAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613181.4
CDS-3UTR CAA 90 bp AGGTCACTGGAATCAATAGTTAACAAGATGGTTGTCCTTTGGGGCCACAGGTGTCAGACTTGTCCTGCTTaGTTCCCAGATAACTTGAAG +
Preference number: 5 (lower is better)
Translates to: RSLESIVNKMVVLWGHRCQTCPA*FPDNLK
Trigger: CTTCAAGTTATCTGGGAACAAAGCAGGACAAGTCTG...ACACCTGTGGCCCCAAAGGACAACCATCTTGTTAACTATTGATTCCAGTGACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398006.6
ENST00000531154.5
CDS-3UTR CAA 90 bp AATGACAAGAGCCCAAACAGGAAGACAGTTCCTAATGCCAGCCAATTCGATGTCGCTGAAAGCAGACACTaGAAAGCAGTAGATCCTTCA +
Preference number: 5 (lower is better)
Translates to: NDKSPNRKTVPNASQFDVAESRH*KAVDPS
Trigger: TGAAGGATCTACTGCTTTCAAGTGTCTGCTTTCAGC...GACATCGAATTGGCTGGCATTAGGAACTGTCTTCCTGTTTGGGCTCTTGTCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613181.4
CDS-3UTR CAA 90 bp TGTCTACCACATGTTGTGACTGTGAGGATCAAACGAGATGCTGTGAAAGTGCCTGCTGAAAGCAGACACTaGAAAGCAGTAGATCCTTCA +
Preference number: 5 (lower is better)
Translates to: CLPHVVTVRIKRDAVKVPAESRH*KAVDPS
Trigger: TGAAGGATCTACTGCTTTCAAGTGTCTGCTTTCAGC...AGGCACTTTCACAGCATCTCGTTTGATCCTCACAGTCACAACATGTGGTAGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616540.5
CDS-3UTR CAA 90 bp AGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGCTCCAGGCGATATCGTaGAAACACAAAGTGGTAACA +
Preference number: 5 (lower is better)
Translates to: RPLLQMLQAMTCRESGHWLQAIS*KHKVVT
Trigger: TGTTACCACTTTGTGTTTCAACGATATCGCCTGGAG...CCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR CAA 90 bp CTGGAATCAATAGTTAACAAGATGGTTGTCCTTTGGGGCCACAGGTGTGTTGCTCTCCAGGCGATATCGTaGAAACACAAAGTGGTAACA +
Preference number: 5 (lower is better)
Translates to: LESIVNKMVVLWGHRCVALQAIS*KHKVVT
Trigger: TGTTACCACTTTGTGTTTCAACGATATCGCCTGGAG...AGCAACACACCTGTGGCCCCAAAGGACAACCATCTTGTTAACTATTGATTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619129.4
CDS-3UTR CAA 90 bp TCCTTTGGGGCCACAGGTGTGTTGCTAACCTCCACTTTTCTTCCTGATTTGCTTACTTTTCTTCCTGATTaGCTTTGCTTTCCGGGGTTT +
Preference number: 5 (lower is better)
Translates to: SFGATGVLLTSTFLPDLLTFLPD*LCFPGF
Trigger: AAACCCCGGAAAGCAAAGCAAATCAGGAAGAAAAGT...AAGCAAATCAGGAAGAAAAGTGGAGGTTAGCAACACACCTGTGGCCCCAAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000524671.1
ENST00000525910.1
ENST00000619129.4
CDS-3UTR CAA 90 bp TGTCTACCACATGTTGTGACTGTGAGGATCAAACGAGATGCTGTGAAAGTGCCTCTTATCATTGCCTATTaGACTAGAAGTGCCCCATGC +
Preference number: 5 (lower is better)
Translates to: CLPHVVTVRIKRDAVKVPLIIAY*TRSAPC
Trigger: GCATGGGGCACTTCTAGTCAAATAGGCAATGATAAG...AGGCACTTTCACAGCATCTCGTTTGATCCTCACAGTCACAACATGTGGTAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR CAA 90 bp ATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAATCAATAGCATGCTTCCTCCTTTaGGCAAGCAGAACAGTCAGT +
Preference number: 5 (lower is better)
Translates to: ITNVTGDDLQGVRSLESIACFLL*ASRTVS
Trigger: ACTGACTGTTCTGCTTGCCAAAAGGAGGAAGCATGC...TATTGATTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616540.5
CDS-3UTR CAA 90 bp TCATGTCAGAAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCCAGACTTGTCCTGCTTaGTTCCCAGATAACTCGGTC +
Preference number: 5 (lower is better)
Translates to: SCQKTFITNVTGDDLQGVQTCPA*FPDNSV
Trigger: GACCGAGTTATCTGGGAACAAAGCAGGACAAGTCTG...GACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTTCTGACATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614444.4
ENST00000616540.5
CDS-3UTR CAA 90 bp TCACTGGAATCAATAGTTAACAAGATGGTTGTCCTTTGGGGCCACAGGTGTGTTTTGTTCCCAGATAACTaGAAGGCCACAAAGCTGTCA +
Preference number: 5 (lower is better)
Translates to: SLESIVNKMVVLWGHRCVLFPDN*KATKLS
Trigger: TGACAGCTTTGTGGCCTTCAAGTTATCTGGGAACAA...AACACACCTGTGGCCCCAAAGGACAACCATCTTGTTAACTATTGATTCCAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398006.6
ENST00000531154.5
CDS-3UTR CAA 90 bp ACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAACAGACTTGTCCTGCTTaGTTCCCAGATAACTTGAAG +
Preference number: 5 (lower is better)
Translates to: TFITNVTGDDLQGVRSLEQTCPA*FPDNLK
Trigger: CTTCAAGTTATCTGGGAACAAAGCAGGACAAGTCTG...TTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398006.6
ENST00000531154.5
CDS-3UTR CAA 90 bp TCACTGGAATCAATAGTTAACAAGATGGTTGTCCTTTGGGGCCACAGGTGTGTTGCTGAAAGCAGACACTaGAAAGCAGTAGATCCTTCA +
Preference number: 5 (lower is better)
Translates to: SLESIVNKMVVLWGHRCVAESRH*KAVDPS
Trigger: TGAAGGATCTACTGCTTTCAAGTGTCTGCTTTCAGC...AACACACCTGTGGCCCCAAAGGACAACCATCTTGTTAACTATTGATTCCAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
CDS-3UTR CAA 90 bp AATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAATCAATAGTTAACGCTGAAAGCAGACACTaGAAAGCAGTAGATCCTTCA +
Preference number: 5 (lower is better)
Translates to: NVTGDDLQGVRSLESIVNAESRH*KAVDPS
Trigger: TGAAGGATCTACTGCTTTCAAGTGTCTGCTTTCAGC...GTTAACTATTGATTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
CDS-3UTR CAA 90 bp AACTTGAGCCATGGTGGTTTGCTGCACAGATCAACCCATCACCTAGATATTAAGGCTGAAAGCAGACACTaGAAAGCAGTAGATCCTTCA +
Preference number: 5 (lower is better)
Translates to: NLSHGGLLHRSTHHLDIKAESRH*KAVDPS
Trigger: TGAAGGATCTACTGCTTTCAAGTGTCTGCTTTCAGC...CTTAATATCTAGGTGATGGGTTGATCTGTGCAGCAAACCACCATGGCTCAAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618252.1
CDS-3UTR CAA 90 bp ACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAATCAATAGTTACAGCAATGGAAGTCTaGTCCATATACCATCCAGTC +
Preference number: 5 (lower is better)
Translates to: TNVTGDDLQGVRSLESIVTAMEV*SIYHPV
Trigger: GACTGGATGGTATATGGACAAGACTTCCATTGCTGT...AACTATTGATTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR CAA 90 bp AAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGACAGCAATGGAAGTCTaGTCCATATACCATCCAGTC +
Preference number: 5 (lower is better)
Translates to: KTFITNVTGDDLQGVRSLTAMEV*SIYHPV
Trigger: GACTGGATGGTATATGGACAAGACTTCCATTGCTGT...CAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR CAA 90 bp AATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAATCAATAGTTAACACAGCAATGGAAGTCTaGTCCATATACCATCCAGTC +
Preference number: 5 (lower is better)
Translates to: NVTGDDLQGVRSLESIVNTAMEV*SIYHPV
Trigger: GACTGGATGGTATATGGACAAGACTTCCATTGCTGT...GTTAACTATTGATTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR CAA 90 bp TATTCCATAAGAGAAGTCAGTGGTAGGACTAGGAGAGCCAAAGCAAAGGCTACAACAGCAATGGAAGTCTaGTCCATATACCATCCAGTC +
Preference number: 5 (lower is better)
Translates to: YSIREVSGRTRRAKAKATTAMEV*SIYHPV
Trigger: GACTGGATGGTATATGGACAAGACTTCCATTGCTGT...TGTAGCCTTTGCTTTGGCTCTCCTAGTCCTACCACTGACTTCTCTTATGGAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613181.4
ENST00000619129.4
CDS-3UTR CAA 90 bp TCACTGGAATCAATAGTTAACAAGATGGTTGTCCTTTGGGGCCACAGGTGTGTTCTCCAGGCGATATCGTaGAAACACAAAGTGGTAACA +
Preference number: 5 (lower is better)
Translates to: SLESIVNKMVVLWGHRCVLQAIS*KHKVVT
Trigger: TGTTACCACTTTGTGTTTCAACGATATCGCCTGGAG...AACACACCTGTGGCCCCAAAGGACAACCATCTTGTTAACTATTGATTCCAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR CAA 90 bp TATTCCATAAGAGAAGTCAGTGGTAGGACTAGGAGAGCCAAAGCAAAGGCTACACTCCAGGCGATATCGTaGAAACACAAAGTGGTAACA +
Preference number: 5 (lower is better)
Translates to: YSIREVSGRTRRAKAKATLQAIS*KHKVVT
Trigger: TGTTACCACTTTGTGTTTCAACGATATCGCCTGGAG...TGTAGCCTTTGCTTTGGCTCTCCTAGTCCTACCACTGACTTCTCTTATGGAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613181.4
ENST00000619129.4
CDS-3UTR CAA 90 bp GATGACTTGCAGGGAGTCAGGTCACTGGAATCAATAGTTAACAAGATGGTTGTCTATTGGATGAATATTTaGGCTCCCGGGGTGTTTCTC +
Preference number: 5 (lower is better)
Translates to: DDLQGVRSLESIVNKMVVYWMNI*APGVFL
Trigger: GAGAAACACCCCGGGAGCCAAAATATTCATCCAATA...GACAACCATCTTGTTAACTATTGATTCCAGTGACCTGACTCCCTGCAAGTCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR CAA 90 bp AGTGCCACAGAGCGAGAAAATGACAAGAGCCCAAACAGGAAGACAGTTCCTAATACTTTTCTTCCTGATTaGCTTTGCTTTCCGGGGTTT +
Preference number: 5 (lower is better)
Translates to: SATERENDKSPNRKTVPNTFLPD*LCFPGF
Trigger: AAACCCCGGAAAGCAAAGCAAATCAGGAAGAAAAGT...ATTAGGAACTGTCTTCCTGTTTGGGCTCTTGTCATTTTCTCGCTCTGTGGCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000619129.4
CDS-3UTR CAA 90 bp TATTCATGTCAGAAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGGGGCCACAGGTGTGTaGCTAACCTCCACTTTTCTT +
Preference number: 5 (lower is better)
Translates to: YSCQKTFITNVTGDDLQGGATGV*LTSTFL
Trigger: AAGAAAAGTGGAGGTTAGCAACACACCTGTGGCCCC...TCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTTCTGACATGAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR CAA 90 bp CAGAAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCAAATTCTTCCTGTAAGTaGGTTCTGCTCTTCTCCGGT +
Preference number: 5 (lower is better)
Translates to: QKTFITNVTGDDLQGVRSNSSCK*VLLFSG
Trigger: ACCGGAGAAGAGCAGAACCAACTTACAGGAAGAATT...TGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616540.5
CDS-3UTR CAA 90 bp AATCACCAACTTCCCATAATAGTAGCTGTCAATGACCACCACAGGCACCAGAAAGAGAAGATGTGGTGTTaGGTTTTCTGCTCCTGTGTT +
Preference number: 5 (lower is better)
Translates to: NHQLPIIVAVNDHHRHQKEKMWC*VFCSCV
Trigger: AACACAGGAGCAGAAAACCAAACACCACATCTTCTC...TTTCTGGTGCCTGTGGTGGTCATTGACAGCTACTATTATGGGAAGTTGGTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618252.1
CDS-3UTR CAA 90 bp TCATGTCAGAAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCCTCCAATTCCATATGTaGACAGCTCCCTTAATGCAG +
Preference number: 5 (lower is better)
Translates to: SCQKTFITNVTGDDLQGVLQFHM*TAPLMQ
Trigger: CTGCATTAAGGGAGCTGTCAACATATGGAATTGGAG...GACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTTCTGACATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398006.6
CDS-3UTR CAA 90 bp ATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAATCAATATTGTTCCCAGATAACTaGAAGGCCACAAAGCTGTCA +
Preference number: 5 (lower is better)
Translates to: ITNVTGDDLQGVRSLESILFPDN*KATKLS
Trigger: TGACAGCTTTGTGGCCTTCAAGTTATCTGGGAACAA...TATTGATTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398006.6
ENST00000531154.5
CDS-3UTR CAA 90 bp TCATGTCAGAAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCGCTGAAAGCAGACACTaGAAAGCAGTAGATCCTTCA +
Preference number: 5 (lower is better)
Translates to: SCQKTFITNVTGDDLQGVAESRH*KAVDPS
Trigger: TGAAGGATCTACTGCTTTCAAGTGTCTGCTTTCAGC...GACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTTCTGACATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
CDS-3UTR CAA 90 bp CTTGTCCATATACCATCCAGTCATGGCTATCAACGTAGTGTACATACAGAAGCTGCTGAAAGCAGACACTaGAAAGCAGTAGATCCTTCA +
Preference number: 5 (lower is better)
Translates to: LVHIPSSHGYQRSVHTEAAESRH*KAVDPS
Trigger: TGAAGGATCTACTGCTTTCAAGTGTCTGCTTTCAGC...AGCTTCTGTATGTACACTACGTTGATAGCCATGACTGGATGGTATATGGACAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612489.1
ENST00000613181.4
CDS-3UTR CAA 90 bp AGAACCAAGAAGGCTAGCATCATTCGACTCACGTGCAACCCAAACTTCTTGCACTTATACAAAACAATGTaGAGTGGTGCAATCACCAAC +
Preference number: 5 (lower is better)
Translates to: RTKKASIIRLTCNPNFLHLYKTM*SGAITN
Trigger: GTTGGTGATTGCACCACTCAACATTGTTTTGTATAA...GTGCAAGAAGTTTGGGTTGCACGTGAGTCGAATGATGCTAGCCTTCTTGGTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619129.4
CDS-3UTR CAA 90 bp CATGTCAGAAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCACTCCAGGCGATATCGTaGAAACACAAAGTGGTAACA +
Preference number: 5 (lower is better)
Translates to: HVRRPLLQMLQAMTCRESLQAIS*KHKVVT
Trigger: TGTTACCACTTTGTGTTTCAACGATATCGCCTGGAG...TGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTTCTGACATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR CAA 90 bp TTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAATCAATATTGGATGAATATTTaGGCTCCCGGGGTGTTTCTC +
Preference number: 5 (lower is better)
Translates to: LLQMLQAMTCRESGHWNQYWMNI*APGVFL
Trigger: GAGAAACACCCCGGGAGCCAAAATATTCATCCAATA...TTGATTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR CAA 90 bp GTCAGAAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTACTTTTCTTCCTGATTaGCTTTGCTTTCCGGGGTTT +
Preference number: 5 (lower is better)
Translates to: VRRPLLQMLQAMTCRESGTFLPD*LCFPGF
Trigger: AAACCCCGGAAAGCAAAGCAAATCAGGAAGAAAAGT...ACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTTCTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000398006.6
ENST00000524671.1
ENST00000525910.1
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR CAA 90 bp GATGACTTGCAGGGAGTCAGGTCACTGGAATCAATAGTTAACAAGATGGTTGTCACTTTTCTTCCTGATTaGCTTTGCTTTCCGGGGTTT +
Preference number: 5 (lower is better)
Translates to: DDLQGVRSLESIVNKMVVTFLPD*LCFPGF
Trigger: AAACCCCGGAAAGCAAAGCAAATCAGGAAGAAAAGT...GACAACCATCTTGTTAACTATTGATTCCAGTGACCTGACTCCCTGCAAGTCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000398006.6
ENST00000524671.1
ENST00000525910.1
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR CAA 90 bp TTGCAGGGAGTCAGGTCACTGGAATCAATAGTTAACAAGATGGTTGTCCTTTGGACTTTTCTTCCTGATTaGCTTTGCTTTCCGGGGTTT +
Preference number: 5 (lower is better)
Translates to: LQGVRSLESIVNKMVVLWTFLPD*LCFPGF
Trigger: AAACCCCGGAAAGCAAAGCAAATCAGGAAGAAAAGT...CCAAAGGACAACCATCTTGTTAACTATTGATTCCAGTGACCTGACTCCCTGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000398006.6
ENST00000524671.1
ENST00000525910.1
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR CAA 90 bp TCACTGGAATCAATAGTTAACAAGATGGTTGTCCTTTGGGGCCACAGGTGTGTTACTTTTCTTCCTGATTaGCTTTGCTTTCCGGGGTTT +
Preference number: 5 (lower is better)
Translates to: SLESIVNKMVVLWGHRCVTFLPD*LCFPGF
Trigger: AAACCCCGGAAAGCAAAGCAAATCAGGAAGAAAAGT...AACACACCTGTGGCCCCAAAGGACAACCATCTTGTTAACTATTGATTCCAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000398006.6
ENST00000524671.1
ENST00000525910.1
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR CAA 90 bp CCATGTATTGTGCTCTCACTAAAGACATACATAGAACAGAGAGATCCAAAATCAGGGGCCACAGGTGTGTaGCTAACCTCCACTTTTCTT +
Preference number: 5 (lower is better)
Translates to: PCIVLSLKTYIEQRDPKSGATGV*LTSTFL
Trigger: AAGAAAAGTGGAGGTTAGCAACACACCTGTGGCCCC...TGATTTTGGATCTCTCTGTTCTATGTATGTCTTTAGTGAGAGCACAATACATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000616540.5
CDS-3UTR CAA 90 bp CCATGTATTGTGCTCTCACTAAAGACATACATAGAACAGAGAGATCCAAAATCATGGCCTAAGAGAGGCTaGCTAGTTCTCAGATGCCAG +
Preference number: 5 (lower is better)
Translates to: PCIVLSLKTYIEQRDPKSWPKRG*LVLRCQ
Trigger: CTGGCATCTGAGAACTAGCAAGCCTCTCTTAGGCCA...TGATTTTGGATCTCTCTGTTCTATGTATGTCTTTAGTGAGAGCACAATACATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR CAA 90 bp TATTCCTGCAGAGGAGATCTCAAAGAGGAGCTTTTTAATATTGTAACTAGCCATAAGCAGGAGAATTGCTaGAACCCGGGAGACAGAGGT +
Preference number: 5 (lower is better)
Translates to: YSCRGDLKEELFNIVTSHKQENC*NPGDRG
Trigger: ACCTCTGTCTCCCGGGTTCAAGCAATTCTCCTGCTT...ATGGCTAGTTACAATATTAAAAAGCTCCTCTTTGAGATCTCCTCTGCAGGAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR CAA 90 bp CAAAACAATGTTGAGTGGTGCAATCACCAACTTCCCATAATAGTAGCTGTCAATCAGACTTGTCCTGCTTaGTTCCCAGATAACTCGGTC +
Preference number: 5 (lower is better)
Translates to: QNNVEWCNHQLPIIVAVNQTCPA*FPDNSV
Trigger: GACCGAGTTATCTGGGAACAAAGCAGGACAAGTCTG...ATTGACAGCTACTATTATGGGAAGTTGGTGATTGCACCACTCAACATTGTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613181.4
ENST00000618252.1
CDS-3UTR CAA 90 bp AATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAATCAATAGTTAACACAAGGTCATTGCTTTaGATGGCTTTATTCATTCCC +
Preference number: 5 (lower is better)
Translates to: NVTGDDLQGVRSLESIVNTRSLL*MALFIP
Trigger: GGGAATGAATAAAGCCATCAAAAGCAATGACCTTGT...GTTAACTATTGATTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398006.6
ENST00000531154.5
CDS-3UTR CAA 90 bp AGGTCACTGGAATCAATAGTTAACAAGATGGTTGTCCTTTGGGGCCACAGGTGTTTATACAAAACAATGTaGAGTGGTGCAATCACCAAC +
Preference number: 5 (lower is better)
Translates to: RSLESIVNKMVVLWGHRCLYKTM*SGAITN
Trigger: GTTGGTGATTGCACCACTCAACATTGTTTTGTATAA...ACACCTGTGGCCCCAAAGGACAACCATCTTGTTAACTATTGATTCCAGTGACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR CAA 90 bp TGTCTACCACATGTTGTGACTGTGAGGATCAAACGAGATGCTGTGAAAGTGCCTTTATACAAAACAATGTaGAGTGGTGCAATCACCAAC +
Preference number: 5 (lower is better)
Translates to: CLPHVVTVRIKRDAVKVPLYKTM*SGAITN
Trigger: GTTGGTGATTGCACCACTCAACATTGTTTTGTATAA...AGGCACTTTCACAGCATCTCGTTTGATCCTCACAGTCACAACATGTGGTAGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616540.5
CDS-3UTR CAA 90 bp TTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAATCAAACTTTTCTTCCTGATTaGCTTTGCTTTCCGGGGTTT +
Preference number: 5 (lower is better)
Translates to: LLQMLQAMTCRESGHWNQTFLPD*LCFPGF
Trigger: AAACCCCGGAAAGCAAAGCAAATCAGGAAGAAAAGT...TTGATTCCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000398006.6
ENST00000524671.1
ENST00000525910.1
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR CAA 90 bp TTCATTTCTATATTCCTTACCTATAACATTTGGCACAGCGTTCTGCCATGTATTAAGCAGGAGAATTGCTaGAACCCGGGAGACAGAGGT +
Preference number: 5 (lower is better)
Translates to: FISIFLTYNIWHSVLPCIKQENC*NPGDRG
Trigger: ACCTCTGTCTCCCGGGTTCAAGCAATTCTCCTGCTT...AATACATGGCAGAACGCTGTGCCAAATGTTATAGGTAAGGAATATAGAAATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR CAA 90 bp CAAGTAATGTTTTCATGGTTGAGTGAGGAATATGGAGGAGCAATAGATGAGAGTCAGAGAACCATGCATTaGCCAAGTATACCTACTCCC +
Preference number: 5 (lower is better)
Translates to: QVMFSWLSEEYGGAIDESQRTMH*PSIPTP
Trigger: GGGAGTAGGTATACTTGGCAAATGCATGGTTCTCTG...ACTCTCATCTATTGCTCCTCCATATTCCTCACTCAACCATGAAAACATTACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR CAA 90 bp AGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGGTCACTGGAGGAAGACAAGTGAATaGGACAATACTCTTGCTTTA +
Preference number: 5 (lower is better)
Translates to: RPLLQMLQAMTCRESGHWRKTSE*DNTLAL
Trigger: TAAAGCAAGAGTATTGTCCAATTCACTTGTCTTCCT...CCAGTGACCTGACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616540.5
CDS-3UTR CAA 90 bp GTTCTCATCGTTCAGCTCCCATTTATAAGTGAGAAGATGTGGTGTTTGGTTTTCTGCTCCTGTGTTAGTTaGCTGAGGATAATGGCTTTC +
Preference number: 5 (lower is better)
Translates to: VLIVQLPFISEKMWCLVFCSCVS*LRIMAF
Trigger: GAAAGCCATTATCCTCAGCAAACTAACACAGGAGCA...GAAAACCAAACACCACATCTTCTCACTTATAAATGGGAGCTGAACGATGAGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618252.1
CDS-3UTR CAA 90 bp TTGCAGGGAGTCAGGTCACTGGAATCAATAGTTAACAAGATGGTTGTCCTTTGGTTATACAAAACAATGTaGAGTGGTGCAATCACCAAC +
Preference number: 5 (lower is better)
Translates to: LQGVRSLESIVNKMVVLWLYKTM*SGAITN
Trigger: GTTGGTGATTGCACCACTCAACATTGTTTTGTATAA...CCAAAGGACAACCATCTTGTTAACTATTGATTCCAGTGACCTGACTCCCTGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398006.6
ENST00000531154.5
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR CAA 90 bp GTCTGTAGCAATTCGGTAAAATTCTGGATACAAATCAAGGGGCCCGTGATATCCTTATACAAAACAATGTaGAGTGGTGCAATCACCAAC +
Preference number: 5 (lower is better)
Translates to: VCSNSVKFWIQIKGPVISLYKTM*SGAITN
Trigger: GTTGGTGATTGCACCACTCAACATTGTTTTGTATAA...GGATATCACGGGCCCCTTGATTTGTATCCAGAATTTTACCGAATTGCTACAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000613181.4
ENST00000619129.4
CDS-3UTR CAA 90 bp TATTCATGTCAGAAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGATATTGGATGAATATTTaGGCTCCCGGGGTGTTTCTC +
Preference number: 5 (lower is better)
Translates to: YSCQKTFITNVTGDDLQGYWMNI*APGVFL
Trigger: GAGAAACACCCCGGGAGCCAAAATATTCATCCAATA...TCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTTCTGACATGAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR CAA 90 bp AATGGCTTTCAGTTCCATCCATGTCCCATAAAGATCAGGTCCATGAGGAGTAAATTATACAAAACAATGTaGAGTGGTGCAATCACCAAC +
Preference number: 5 (lower is better)
Translates to: NGFQFHPCPIKIRSMRSKLYKTM*SGAITN
Trigger: GTTGGTGATTGCACCACTCAACATTGTTTTGTATAA...TTTACTCCTCATGGACCTGATCTTTATGGGACATGGATGGAACTGAAAGCCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618252.1
CDS-3UTR CAA 90 bp TCATGTCAGAAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGAGTCAGTCCTGGCCTTTCTTaGCGCTATATTATAATTAAG +
Preference number: 5 (lower is better)
Translates to: SCQKTFITNVTGDDLQGVSPGLS*RYIIIK
Trigger: CTTAATTATAATATAGCGCAAAGAAAGGCCAGGACT...GACTCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTTCTGACATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616540.5
CDS-3UTR CAA 90 bp CAATATCAGTTAGGTCTCTGGTTAACCTCATCAGTCCTTTCAAGTAATGTTTTCTCAGCATCACAAGATTaGGGGATTCAGATAAGGCTG +
Preference number: 5 (lower is better)
Translates to: QYQLGLWLTSSVLSSNVFSASQD*GIQIRL
Trigger: CAGCCTTATCTGAATCCCCAAATCTTGTGATGCTGA...GAAAACATTACTTGAAAGGACTGATGAGGTTAACCAGAGACCTAACTGATATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR CAA 90 bp TATTCATGTCAGAAGACCTTTATTACAAATGTTACAGGCGATGACTTGCAGGGATTATACAAAACAATGTaGAGTGGTGCAATCACCAAC +
Preference number: 5 (lower is better)
Translates to: YSCQKTFITNVTGDDLQGLYKTM*SGAITN
Trigger: GTTGGTGATTGCACCACTCAACATTGTTTTGTATAA...TCCCTGCAAGTCATCGCCTGTAACATTTGTAATAAAGGTCTTCTGACATGAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614444.4
ENST00000616540.5
ENST00000619129.4
CDS-3UTR CAA 90 bp TTCATTTCTATATTCCTTACCTATAACATTTGGCACAGCGTTCTGCCATGTATTACTTTTCTTCCTGATTaGCTTTGCTTTCCGGGGTTT +
Preference number: 5 (lower is better)
Translates to: FISIFLTYNIWHSVLPCITFLPD*LCFPGF
Trigger: AAACCCCGGAAAGCAAAGCAAATCAGGAAGAAAAGT...AATACATGGCAGAACGCTGTGCCAAATGTTATAGGTAAGGAATATAGAAATGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR CAA 90 bp TATTCCTGCAGAGGAGATCTCAAAGAGGAGCTTTTTAATATTGTAACTAGCCATGTAATGTTTTCATGGTaGAGTGAGGAATATGGAGGA +
Preference number: 5 (lower is better)
Translates to: YSCRGDLKEELFNIVTSHVMFSW*SEEYGG
Trigger: TCCTCCATATTCCTCACTCAACCATGAAAACATTAC...ATGGCTAGTTACAATATTAAAAAGCTCCTCTTTGAGATCTCCTCTGCAGGAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR CAA 90 bp CAATATCAGTTAGGTCTCTGGTTAACCTCATCAGTCCTTTCAAGTAATGTTTTCGTAATGTTTTCATGGTaGAGTGAGGAATATGGAGGA +
Preference number: 5 (lower is better)
Translates to: QYQLGLWLTSSVLSSNVFVMFSW*SEEYGG
Trigger: TCCTCCATATTCCTCACTCAACCATGAAAACATTAC...GAAAACATTACTTGAAAGGACTGATGAGGTTAACCAGAGACCTAACTGATATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR CAA 90 bp CAAGTAATGTTTTCATGGTTGAGTGAGGAATATGGAGGAGCAATAGATGAGAGTAGTCCTGGCCTTTCTTaGCGCTATATTATAATTAAG +
Preference number: 5 (lower is better)
Translates to: QVMFSWLSEEYGGAIDESSPGLS*RYIIIK
Trigger: CTTAATTATAATATAGCGCAAAGAAAGGCCAGGACT...ACTCTCATCTATTGCTCCTCCATATTCCTCACTCAACCATGAAAACATTACTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS-3UTR CAA 90 bp TATTCCTGCAGAGGAGATCTCAAAGAGGAGCTTTTTAATATTGTAACTAGCCATAGGAAGACAAGTGAATaGGACAATACTCTTGCTTTA +
Preference number: 5 (lower is better)
Translates to: YSCRGDLKEELFNIVTSHRKTSE*DNTLAL
Trigger: TAAAGCAAGAGTATTGTCCAATTCACTTGTCTTCCT...ATGGCTAGTTACAATATTAAAAAGCTCCTCTTTGAGATCTCCTCTGCAGGAATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532425.6
ENST00000616540.5
CDS TCA 72 bp GGAGCTCGGGCCTCCCGCGGTGAGGCCAGGCCGGACTaGGCCCCGCGCGCCACAGCTAAGACCCTCCCGGGG +
Preference number: 6 (lower is better)
Translates to: GARASRGEARPD*APRATAKTLPG
Trigger: CCCCGGGAGGGTCTTAGCTGTGGCGCGCGGGGCTCAGTCCGGCCTGGCCTCACCGCGGGAGGCCCGAGCTCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398006.6
CDS CAA 72 bp CCGCCCGCCTCTCGGCTGCCCAGCAGCTCCCGCAGCTaGTCCGCAGCCGGGGCCGTATCCCCACTGCTGGCC +
Preference number: 6 (lower is better)
Translates to: PPASRLPSSSRS*SAAGAVSPLLA
Trigger: GGCCAGCAGTGGGGATACGGCCCCGGCTGCGGACAAGCTGCGGGAGCTGCTGGGCAGCCGAGAGGCGGGCGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612489.1
ENST00000613181.4
ENST00000614444.4
ENST00000616540.5
ENST00000618252.1
ENST00000619129.4
CDS GCA 72 bp CCCTTCCCCATAGATGAGGTAGTGTGTTCGGTCCGGTaGTCCGCGCCGCCCGCCTCTCGGCTGCCCAGCAGC +
Preference number: 6 (lower is better)
Translates to: PFPIDEVVCSVR*SAPPASRLPSS
Trigger: GCTGCTGGGCAGCCGAGAGGCGGGCGGCGCGGAGCACCGGACCGAACACACTACCTCATCTATGGGGAAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619129.4
CDS GCA 72 bp ACTTGTCCTGCTTTGTTCCCAGATAACTCGGTCCGGTaGTCCGCGCCGCCCGCCTCTCGGCTGCCCAGCAGC +
Preference number: 6 (lower is better)
Translates to: TCPALFPDNSVR*SAPPASRLPSS
Trigger: GCTGCTGGGCAGCCGAGAGGCGGGCGGCGCGGAGCACCGGACCGAGTTATCTGGGAACAAAGCAGGACAAGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000612489.1
ENST00000613181.4
ENST00000614444.4
ENST00000616540.5
ENST00000618252.1
CDS CAA 72 bp GCAGTAGATCCTTCAGGTGCCCAGACTTGTCCTGCTTaGTTCCCAGATAACTCGGTCCGGTGCTCCGCGCCG +
Preference number: 6 (lower is better)
Translates to: AVDPSGAQTCPA*FPDNSVRCSAP
Trigger: CGGCGCGGAGCACCGGACCGAGTTATCTGGGAACAAAGCAGGACAAGTCTGGGCACCTGAAGGATCTACTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000612489.1
ENST00000613181.4
ENST00000614444.4
ENST00000616540.5
ENST00000618252.1
CDS CAA 90 bp CACTTGAAAGCAGTAGATCCTTCAGGTGCCCAGACTTGTCCTGCTTaGTTCCCAGATAACTCGGTCCGGTGCTCCGCGCCGCCCGCCTCT +
Preference number: 6 (lower is better)
Translates to: HLKAVDPSGAQTCPA*FPDNSVRCSAPPAS
Trigger: AGAGGCGGGCGGCGCGGAGCACCGGACCGAGTTATCTGGGAACAAAGCAGGACAAGTCTGGGCACCTGAAGGATCTACTGCTTTCAAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000612489.1
ENST00000613181.4
ENST00000614444.4
ENST00000616540.5
ENST00000618252.1
CDS TCA 72 bp GGGAATATTCCCAAGTCTGAAACCCTTCCCCATAGATaGGGTAGTGTGTTCGGTCCGGTGCTCCGCGCCGCC +
Preference number: 6 (lower is better)
Translates to: GNIPKSETLPHR*GSVFGPVLRAA
Trigger: GGCGGCGCGGAGCACCGGACCGAACACACTACCTCATCTATGGGGAAGGGTTTCAGACTTGGGAATATTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619129.4
CDS TCA 72 bp TACAGCGCAGTGGAGGGATCTAAGGTGGGCGAAGACTaGATGCTGACCCGCCCAGGAAGACCAATAGGACCT +
Preference number: 6 (lower is better)
Translates to: YSAVEGSKVGED*MLTRPGRPIGP
Trigger: AGGTCCTATTGGTCTTCCTGGGCGGGTCAGCATTCAGTCTTCGCCCACCTTAGATCCCTCCACTGCGCTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398006.6
ENST00000530723.1
CDS TCA 72 bp GTGCAATCACCAACTTCCCATAATAGTAGCTGTCAATaGCCACCACAGGCACCCAAGAGCTGCACTGAATGG +
Preference number: 6 (lower is better)
Translates to: VQSPTSHNSSCQ*PPQAPKSCTEW
Trigger: CCATTCAGTGCAGCTCTTGGGTGCCTGTGGTGGTCATTGACAGCTACTATTATGGGAAGTTGGTGATTGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530851.6
CDS CAA 90 bp ATGTTGCTCAGGAGAGCAGCACATAACCTTGCTGAAAGCAGACACTaGAAAGCAGTAGATCCTTCAGGTGCCCAGACTTGTCCTGCTTTG +
Preference number: 6 (lower is better)
Translates to: MLLRRAAHNLAESRH*KAVDPSGAQTCPAL
Trigger: CAAAGCAGGACAAGTCTGGGCACCTGAAGGATCTACTGCTTTCAAGTGTCTGCTTTCAGCAAGGTTATGTGCTGCTCTCCTGAGCAACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000398006.6
ENST00000530723.1
ENST00000531154.5
ENST00000612489.1
ENST00000613181.4
ENST00000614444.4
ENST00000616540.5
ENST00000618252.1
CDS CCA 72 bp GTGAGGATACAAGTCAGCTGTCTGCAGCCAGAAAGATaGCCTTTACCAGAACTTGACTATACTGGCATCGTG +
Preference number: 6 (lower is better)
Translates to: VRIQVSCLQPER*PLPELDYTGIV
Trigger: CACGATGCCAGTATAGTCAAGTTCTGGTAAAGGCCATCTTTCTGGCTGCAGACAGCTGACTTGTATCCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524671.1
CDS CAA 72 bp AGGAGAGCAGCACATAACCTTGCTGAAAGCAGACACTaGAAAGCAGTAGATCCTTCAGGTGCCCAGACTTGT +
Preference number: 6 (lower is better)
Translates to: RRAAHNLAESRH*KAVDPSGAQTC
Trigger: ACAAGTCTGGGCACCTGAAGGATCTACTGCTTTCAAGTGTCTGCTTTCAGCAAGGTTATGTGCTGCTCTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000398006.6
ENST00000530723.1
ENST00000531154.5
ENST00000612489.1
ENST00000613181.4
ENST00000614444.4
ENST00000616540.5
ENST00000618252.1
CDS GCA 72 bp CTGAGAACCAAGAAGGCTAGCATCATTCGACTCACGTaGAACCCAAACTTCTTGCACACAGCCCTTATTAGT +
Preference number: 6 (lower is better)
Translates to: LRTKKASIIRLT*NPNFLHTALIS
Trigger: ACTAATAAGGGCTGTGTGCAAGAAGTTTGGGTTGCACGTGAGTCGAATGATGCTAGCCTTCTTGGTTCTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613181.4
CDS CAA 72 bp TTCTGCTCTTCTCCGGTCTCCACTTTTCTTCCTGATTaGCTTTGCTTTCCGGGGTTTGAGGATGGTGTAGTT +
Preference number: 6 (lower is better)
Translates to: FCSSPVSTFLPD*LCFPGFEDGVV
Trigger: AACTACACCATCCTCAAACCCCGGAAAGCAAAGCAAATCAGGAAGAAAAGTGGAGACCGGAGAAGAGCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532425.6
CDS CAA 72 bp CCATCCAGTACCAGGATTTTCAATTCTTCCTGTAAGTaGGTTCTGCTCTTCTCCGGTCTCCACTTTTCTTCC +
Preference number: 6 (lower is better)
Translates to: PSSTRIFNSSCK*VLLFSGLHFSS
Trigger: GGAAGAAAAGTGGAGACCGGAGAAGAGCAGAACCAACTTACAGGAAGAATTGAAAATCCTGGTACTGGATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532425.6
CDS TCA 72 bp ATAGATGAGGTAGTGTGTCTACTGGCTCCCAGTAGTTaGATGTTTCATCACAGTCAGAGATGTTGCTCAGGA +
Preference number: 6 (lower is better)
Translates to: IDEVVCLLAPSS*MFHHSQRCCSG
Trigger: TCCTGAGCAACATCTCTGACTGTGATGAAACATTCAACTACTGGGAGCCAGTAGACACACTACCTCATCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530723.1
ENST00000612489.1
CDS CAA 90 bp GAAAGATGGCCTTTACCAGAACTTGACTATACTGGCATCGTGATCTaGGTCTTCCAGCCTTCAAAACTAGAAGCATCAAGGAATGGTCTA +
Preference number: 6 (lower is better)
Translates to: ERWPLPELDYTGIVI*VFQPSKLEASRNGL
Trigger: TAGACCATTCCTTGATGCTTCTAGTTTTGAAGGCTGGAAGACCAAGATCACGATGCCAGTATAGTCAAGTTCTGGTAAAGGCCATCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524671.1
CDS GCA 72 bp GTACCAGGATTTTCAATTCTTCCTGTAAGTTGGTTCTaGTCTTCTCCGGTCTCCACTTTTCTTCCTGATTTG +
Preference number: 6 (lower is better)
Translates to: VPGFSILPVSWF*SSPVSTFLPDL
Trigger: CAAATCAGGAAGAAAAGTGGAGACCGGAGAAGAGCAGAACCAACTTACAGGAAGAATTGAAAATCCTGGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532425.6
CDS CAA 72 bp ATTCGATGTCACAGTATAGTGCTCCAGGCGATATCGTaGAAACACAAAGTGGTAACATTTCTGGAAGTACAG +
Preference number: 6 (lower is better)
Translates to: IRCHSIVLQAIS*KHKVVTFLEVQ
Trigger: CTGTACTTCCAGAAATGTTACCACTTTGTGTTTCAACGATATCGCCTGGAGCACTATACTGTGACATCGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531154.5
ENST00000616540.5