RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ALG14 (Homo sapiens)

Ensembl gene IDs: ENSG00000172339

Ensembl transcript IDs: ENST00000370205.6, ENST00000495856.1, ENST00000507727.2

Found 316 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ATCACAGGGCACAGAAGGGAGAGCTTTTCTCTCTTCCAAGGTGTCTaGGCCTCAGCTGGGAAGACCAGAAAGCCTGGAGTGACTCAAATG +
Preference number: 1 (lower is better)
Translates to: ITGHRRESFSLFQGV*ASAGKTRKPGVTQM
Trigger: CATTTGAGTCACTCCAGGCTTTCTGGTCTTCCCAGCTGAGGCTCAGACACCTTGGAAGAGAGAAAAGCTCTCCCTTCTGTGCCCTGTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR GCA 90 bp CAAAAGAATGTTGAAGGCGGACAAGATTTGGGTGTCTGCTCATTGTaGGCCAGGGCTGAAGTCATGGGAAGAAACCCCGTGAGGCTCAAA +
Preference number: 1 (lower is better)
Translates to: QKNVEGGQDLGVCSL*ARAEVMGRNPVRLK
Trigger: TTTGAGCCTCACGGGGTTTCTTCCCATGACTTCAGCCCTGGCGCACAATGAGCAGACACCCAAATCTTGTCCGCCTTCAACATTCTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR CCA 90 bp AGAGGGATGGGCCCTAACAAAAGAATGTTGAAGGCGGACAAGATTTaGGTGTCTGCTCATTGTGCGCCAGGGCTGAAGTCATGGGAAGAA +
Preference number: 1 (lower is better)
Translates to: RGMGPNKRMLKADKI*VSAHCAPGLKSWEE
Trigger: TTCTTCCCATGACTTCAGCCCTGGCGCACAATGAGCAGACACCCAAATCTTGTCCGCCTTCAACATTCTTTTGTTAGGGCCCATCCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR TCA 90 bp AGCATCTTTTCTACAATTCTCTCTGGTCTGATCTTTGTTAAGCTCTaGCCTGACAGAAGCCTCTGCAGCAGGATTACCTGTGGGGGCCCA +
Preference number: 1 (lower is better)
Translates to: SIFSTILSGLIFVKL*PDRSLCSRITCGGP
Trigger: TGGGCCCCCACAGGTAATCCTGCTGCAGAGGCTTCTGTCAGGTCAGAGCTTAACAAAGATCAGACCAGAGAGAATTGTAGAAAAGATGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR TCA 90 bp TTTGTTTTTAGAGTGCTAGAGGGATGGGCCCTAACAAAAGAATGTTaGAGGCGGACAAGATTTGGGTGTCTGCTCATTGTGCGCCAGGGC +
Preference number: 1 (lower is better)
Translates to: FVFRVLEGWALTKEC*RRTRFGCLLIVRQG
Trigger: GCCCTGGCGCACAATGAGCAGACACCCAAATCTTGTCCGCCTTCAACATTCTTTTGTTAGGGCCCATCCCTCTAGCACTCTAAAAACAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR CCA 90 bp GAGGTTAGAGGGAAGGAAATGGAATTCCTGTTTTTGAGGAGCTCCTaGGCCAGGCACTGCACTAACTATTGTACTTCTATTCCAGTAGAC +
Preference number: 1 (lower is better)
Translates to: EVRGKEMEFLFLRSS*ARHCTNYCTSIPVD
Trigger: GTCTACTGGAATAGAAGTACAATAGTTAGTGCAGTGCCTGGCCCAGGAGCTCCTCAAAAACAGGAATTCCATTTCCTTCCCTCTAACCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR GCA 90 bp AAGGAAATGGAATTCCTGTTTTTGAGGAGCTCCTGGGCCAGGCACTaGACTAACTATTGTACTTCTATTCCAGTAGACATGGCACCACTA +
Preference number: 1 (lower is better)
Translates to: KEMEFLFLRSSWARH*TNYCTSIPVDMAPL
Trigger: TAGTGGTGCCATGTCTACTGGAATAGAAGTACAATAGTTAGTGCAGTGCCTGGCCCAGGAGCTCCTCAAAAACAGGAATTCCATTTCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR CCA 90 bp CATTCCTACCAGCAATGTAGGAGGGCTCCAATTTCTCCAAATCCTTaGCAGCATGTATTTTCTGGGTTTTCTTGGACTATAGCCACCCTA +
Preference number: 1 (lower is better)
Translates to: HSYQQCRRAPISPNP*QHVFSGFSWTIATL
Trigger: TAGGGTGGCTATAGTCCAAGAAAACCCAGAAAATACATGCTGCCAAGGATTTGGAGAAATTGGAGCCCTCCTACATTGCTGGTAGGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR TCA 90 bp CTAATACGCTCTGATACTCCAGGGAAGCAACCAGTGACTGAGATTTaGGGATTAAAATCAAAGCACAATGAACTATCATTTGGCTGCCCC +
Preference number: 1 (lower is better)
Translates to: LIRSDTPGKQPVTEI*GLKSKHNELSFGCP
Trigger: GGGGCAGCCAAATGATAGTTCATTGTGCTTTGATTTTAATCCTCAAATCTCAGTCACTGGTTGCTTCCCTGGAGTATCAGAGCGTATTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR TCA 90 bp GCAGATCAGAACTCAGCCTTGGCCATCATCTTGATTTCAGCCTTTTaGGATCTTGAGCAGAAAACCTTCTTTGCCTGGATTTCTAACCTA +
Preference number: 1 (lower is better)
Translates to: ADQNSALAIILISAF*DLEQKTFFAWISNL
Trigger: TAGGTTAGAAATCCAGGCAAAGAAGGTTTTCTGCTCAAGATCTCAAAAGGCTGAAATCAAGATGATGGCCAAGGCTGAGTTCTGATCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR TCA 90 bp CTGAATGATCAGGAAGATGCAATAACACATGTCTCAGCCTGGCTCTaGATGAGTACACAGCAGCCTGAACCTATGAAAGATATAACATTT +
Preference number: 1 (lower is better)
Translates to: LNDQEDAITHVSAWL*MSTQQPEPMKDITF
Trigger: AAATGTTATATCTTTCATAGGTTCAGGCTGCTGTGTACTCATTCAGAGCCAGGCTGAGACATGTGTTATTGCATCTTCCTGATCATTCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR TCA 90 bp GGTTTATGCTCAAGGTTCTGGAGGCTTGTGGAGTGCAAATTGTCATaGAGCCAATTTAATATAACTGCTTCCTTTATGCTGAAAGGATTC +
Preference number: 1 (lower is better)
Translates to: GLCSRFWRLVECKLS*SQFNITASFMLKGF
Trigger: GAATCCTTTCAGCATAAAGGAAGCAGTTATATTAAATTGGCTTCATGACAATTTGCACTCCACAAGCCTCCAGAACCTTGAGCATAAACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR TCA 90 bp TTACTATTTAGCAGGCTCTGTGCTAAACACTGTACATACATCATCTaGATGTTTAGTGCTCCCTACAACTCTAACGCAGGTACATTATGC +
Preference number: 1 (lower is better)
Translates to: LLFSRLCAKHCTYII*MFSAPYNSNAGTLC
Trigger: GCATAATGTACCTGCGTTAGAGTTGTAGGGAGCACTAAACATTCAGATGATGTATGTACAGTGTTTAGCACAGAGCCTGCTAAATAGTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR TCA 90 bp AAGCTACTTTCTGTCTATGGACTTGCCTACTCTGGACATTTCATATaGATAGAATCATGCATTTGTTGTCTTTTGTGGCTGGCTTCTGTA +
Preference number: 1 (lower is better)
Translates to: KLLSVYGLAYSGHFI*IESCICCLLWLASV
Trigger: TACAGAAGCCAGCCACAAAAGACAACAAATGCATGATTCTATTCATATGAAATGTCCAGAGTAGGCAAGTCCATAGACAGAAAGTAGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR-3UTR GCA 90 bp AGCCTCTGCAGCAGGATTACCTGTGGGGGCCCAGGGAAGCTGCCCCACAGCACAGCTCACTGCAGCCTCTaGCTCCCGGGTTCAAGCGAT +
Preference number: 2 (lower is better)
Translates to: SLCSRITCGGPGKLPHSTAHCSL*LPGSSD
Trigger: ATCGCTTGAACCCGGGAGGCAGAGGCTGCAGTGAGC...TGTGCTGTGGGGCAGCTTCCCTGGGCCCCCACAGGTAATCCTGCTGCAGAGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR-3UTR TCA 90 bp AGCCTCTGCAGCAGGATTACCTGTGGGGGCCCAGGGAAGCTGCCCCACAGCACATGGAATTCCTGTTTTTaGGGAGCTCCTGGGCCAGGC +
Preference number: 2 (lower is better)
Translates to: SLCSRITCGGPGKLPHSTWNSCF*GAPGPG
Trigger: GCCTGGCCCAGGAGCTCCTCAAAAACAGGAATTCCA...TGTGCTGTGGGGCAGCTTCCCTGGGCCCCCACAGGTAATCCTGCTGCAGAGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR-3UTR TCA 90 bp AGCCTCTGCAGCAGGATTACCTGTGGGGGCCCAGGGAAGCTGCCCCACAGCACAAGGAAGATGTCCGGCTaGCAGATGCGCCTGTTACAT +
Preference number: 2 (lower is better)
Translates to: SLCSRITCGGPGKLPHSTRKMSG*QMRLLH
Trigger: ATGTAACAGGCGCATCTGTCAGCCGGACATCTTCCT...TGTGCTGTGGGGCAGCTTCCCTGGGCCCCCACAGGTAATCCTGCTGCAGAGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR-3UTR GCA 90 bp AGCCTCTGCAGCAGGATTACCTGTGGGGGCCCAGGGAAGCTGCCCCACAGCACATGTCCGGCTGACAGATaGGCCTGTTACATGATTCAG +
Preference number: 2 (lower is better)
Translates to: SLCSRITCGGPGKLPHSTCPADR*ACYMIQ
Trigger: CTGAATCATGTAACAGGCGCATCTGTCAGCCGGACA...TGTGCTGTGGGGCAGCTTCCCTGGGCCCCCACAGGTAATCCTGCTGCAGAGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR-3UTR CCA 90 bp AGCCTCTGCAGCAGGATTACCTGTGGGGGCCCAGGGAAGCTGCCCCACAGCACATTTCACCTCAGCCCCTaGTTGTATGATACTAATACG +
Preference number: 2 (lower is better)
Translates to: SLCSRITCGGPGKLPHSTFHLSP*LYDTNT
Trigger: CGTATTAGTATCATACAACCAGGGGCTGAGGTGAAA...TGTGCTGTGGGGCAGCTTCCCTGGGCCCCCACAGGTAATCCTGCTGCAGAGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR-3UTR CCA 90 bp AGCCTCTGCAGCAGGATTACCTGTGGGGGCCCAGGGAAGCTGCCCCACAGCACACCTGAACTTGAATTCTaGCTTTGCTACTTACTACTC +
Preference number: 2 (lower is better)
Translates to: SLCSRITCGGPGKLPHSTPELEF*LCYLLL
Trigger: GAGTAGTAAGTAGCAAAGCCAGAATTCAAGTTCAGG...TGTGCTGTGGGGCAGCTTCCCTGGGCCCCCACAGGTAATCCTGCTGCAGAGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR-3UTR CCA 90 bp GGCTGGAATAATCTGGAGACTTCTCCTCTTGCATGTCTAGTGCCTCCAGTGAGACCCCCAGAACGGGCATaGTGGCTGACGCCTGTAATT +
Preference number: 2 (lower is better)
Translates to: GWNNLETSPLACLVPPVRPPERA*WLTPVI
Trigger: AATTACAGGCGTCAGCCACCATGCCCGTTCTGGGGG...TCTCACTGGAGGCACTAGACATGCAAGAGGAGAAGTCTCCAGATTATTCCAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR-3UTR TCA 90 bp GGCTGGAATAATCTGGAGACTTCTCCTCTTGCATGTCTAGTGCCTCCAGTGAGAGTCTCAGCCTGGCTCTaGATGAGTACACAGCAGCCT +
Preference number: 2 (lower is better)
Translates to: GWNNLETSPLACLVPPVRVSAWL*MSTQQP
Trigger: AGGCTGCTGTGTACTCATTCAGAGCCAGGCTGAGAC...TCTCACTGGAGGCACTAGACATGCAAGAGGAGAAGTCTCCAGATTATTCCAGCC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR-3UTR GCA 90 bp AGGAGCTCCTGGGCCAGGCACTGCACTAACTATTGTACTTCTATTCCAGTAGACCCAGGCTGGATGGAGTaGAATGGTGCAATCTCGGCT +
Preference number: 2 (lower is better)
Translates to: RSSWARHCTNYCTSIPVDPGWME*NGAISA
Trigger: AGCCGAGATTGCACCATTGCACTCCATCCAGCCTGG...GTCTACTGGAATAGAAGTACAATAGTTAGTGCAGTGCCTGGCCCAGGAGCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR-3UTR CCA 90 bp TCATTTTCCTATCCATGGTGTAGAAATACATCTTCTGCCTTTTGCCTGGCAGGCCAGCAGGATTACCTGTaGGGGCCCAGGGAAGCTGCC +
Preference number: 2 (lower is better)
Translates to: SFSYPWCRNTSSAFCLAGQQDYL*GPREAA
Trigger: GGCAGCTTCCCTGGGCCCCCACAGGTAATCCTGCTG...GCCTGCCAGGCAAAAGGCAGAAGATGTATTTCTACACCATGGATAGGAAAATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR CAA 90 bp CACAGCAGGGAAATTGTGCCACCAGCCCCCTCTGCTAATGGGACCTaGAGGACTCAAATTAGCCATAACAGTAACACACAGCAGAGCATG +
Preference number: 2 (lower is better)
Translates to: HSREIVPPAPSANGT*RTQISHNSNTQQSM
Trigger: CATGCTCTGCTGTGTGTTACTGTTATGGCTAATTTGAGTCCTCAAGGTCCCATTAGCAGAGGGGGCTGGTGGCACAATTTCCCTGCTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR-3UTR TCA 90 bp CTACCACTGATGGAGACAAATGTGACTGAGGGCTTGAGGGCTTACTATTTAGCAGTGCAGAACTCTGTGTaGCTGCACAGGCCACACACC +
Preference number: 2 (lower is better)
Translates to: LPLMETNVTEGLRAYYLAVQNSV*LHRPHT
Trigger: GGTGTGTGGCCTGTGCAGTCACACAGAGTTCTGCAC...TGCTAAATAGTAAGCCCTCAAGCCCTCAGTCACATTTGTCTCCATCAGTGGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR-3UTR CCA 90 bp GGCTGGAATAATCTGGAGACTTCTCCTCTTGCATGTCTAGTGCCTCCAGTGAGACTGGATGGAGTGCAATaGTGCAATCTCGGCTCACTG +
Preference number: 2 (lower is better)
Translates to: GWNNLETSPLACLVPPVRLDGVQ*CNLGSL
Trigger: CAGTGAGCCGAGATTGCACCATTGCACTCCATCCAG...TCTCACTGGAGGCACTAGACATGCAAGAGGAGAAGTCTCCAGATTATTCCAGCC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR-3UTR CCA 90 bp GGCTGGAATAATCTGGAGACTTCTCCTCTTGCATGTCTAGTGCCTCCAGTGAGACACGAGGTGAGGAGATaGAGACCATCCTGGCTAACA +
Preference number: 2 (lower is better)
Translates to: GWNNLETSPLACLVPPVRHEVRR*RPSWLT
Trigger: TGTTAGCCAGGATGGTCTCCATCTCCTCACCTCGTG...TCTCACTGGAGGCACTAGACATGCAAGAGGAGAAGTCTCCAGATTATTCCAGCC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR-3UTR TCA 90 bp TATGAACTCTGTGGATCAGCAAATCACAGGGCACAGAAGGGAGAGCTTTTCTCTGGCACGAGAATCGCTTaGACCAGGGAGGTAGAGGTT +
Preference number: 2 (lower is better)
Translates to: YELCGSANHRAQKGELFSGTRIA*TREVEV
Trigger: AACCTCTACCTCCCTGGTTCAAGCGATTCTCGTGCC...AGAGAAAAGCTCTCCCTTCTGTGCCCTGTGATTTGCTGATCCACAGAGTTCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR-3UTR TCA 90 bp CTACCACTGATGGAGACAAATGTGACTGAGGGCTTGAGGGCTTACTATTTAGCAGCCCGGCCAACATGGTaGAACCCCATCTCTGCTAAA +
Preference number: 2 (lower is better)
Translates to: LPLMETNVTEGLRAYYLAARPTW*NPISAK
Trigger: TTTAGCAGAGATGGGGTTTCACCATGTTGGCCGGGC...TGCTAAATAGTAAGCCCTCAAGCCCTCAGTCACATTTGTCTCCATCAGTGGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR CAA 90 bp ACACCAGGGGAGCTACCACTGATGGAGACAAATGTGACTGAGGGCTaGAGGGCTTACTATTTAGCAGGCTCTGTGCTAAACACTGTACAT +
Preference number: 2 (lower is better)
Translates to: TPGELPLMETNVTEG*RAYYLAGSVLNTVH
Trigger: ATGTACAGTGTTTAGCACAGAGCCTGCTAAATAGTAAGCCCTCAAGCCCTCAGTCACATTTGTCTCCATCAGTGGTAGCTCCCCTGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR-3UTR TCA 90 bp GGCTGGAATAATCTGGAGACTTCTCCTCTTGCATGTCTAGTGCCTCCAGTGAGAGATACTAATACGCTCTaGTACTCCAGGGAAGCAACC +
Preference number: 2 (lower is better)
Translates to: GWNNLETSPLACLVPPVRDTNTL*YSREAT
Trigger: GGTTGCTTCCCTGGAGTATCAGAGCGTATTAGTATC...TCTCACTGGAGGCACTAGACATGCAAGAGGAGAAGTCTCCAGATTATTCCAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR-3UTR TCA 90 bp TCATTTTCCTATCCATGGTGTAGAAATACATCTTCTGCCTTTTGCCTGGCAGGCGGCACAAGAATCGCTTaGAGCCAGGAGGCAGAGGTT +
Preference number: 2 (lower is better)
Translates to: SFSYPWCRNTSSAFCLAGGTRIA*SQEAEV
Trigger: AACCTCTGCCTCCTGGCTTCAAGCGATTCTTGTGCC...GCCTGCCAGGCAAAAGGCAGAAGATGTATTTCTACACCATGGATAGGAAAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR-3UTR TCA 90 bp TATGAACTCTGTGGATCAGCAAATCACAGGGCACAGAAGGGAGAGCTTTTCTCTGATGGGTGGATCACCTaGGGTTGGGAGTTCAAGATC +
Preference number: 2 (lower is better)
Translates to: YELCGSANHRAQKGELFSDGWIT*GWEFKI
Trigger: GATCTTGAACTCCCAACCTCAGGTGATCCACCCATC...AGAGAAAAGCTCTCCCTTCTGTGCCCTGTGATTTGCTGATCCACAGAGTTCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR-3UTR GCA 90 bp GGCTGGAATAATCTGGAGACTTCTCCTCTTGCATGTCTAGTGCCTCCAGTGAGATCCTGGGCCAGGCACTaGACTAACTATTGTACTTCT +
Preference number: 2 (lower is better)
Translates to: GWNNLETSPLACLVPPVRSWARH*TNYCTS
Trigger: AGAAGTACAATAGTTAGTGCAGTGCCTGGCCCAGGA...TCTCACTGGAGGCACTAGACATGCAAGAGGAGAAGTCTCCAGATTATTCCAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR-3UTR CCA 90 bp CTACCACTGATGGAGACAAATGTGACTGAGGGCTTGAGGGCTTACTATTTAGCAGTCACCCAGGCTGGATaGAGTGCAATGGTGCAATCT +
Preference number: 2 (lower is better)
Translates to: LPLMETNVTEGLRAYYLAVTQAG*SAMVQS
Trigger: AGATTGCACCATTGCACTCCATCCAGCCTGGGTGAC...TGCTAAATAGTAAGCCCTCAAGCCCTCAGTCACATTTGTCTCCATCAGTGGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR-3UTR CCA 90 bp GGCTGGAATAATCTGGAGACTTCTCCTCTTGCATGTCTAGTGCCTCCAGTGAGACAACCTCCACCTCCCTaGTTCAAGCAATTATTTGCC +
Preference number: 2 (lower is better)
Translates to: GWNNLETSPLACLVPPVRQPPPP*FKQLFA
Trigger: GGCAAATAATTGCTTGAACCAGGGAGGTGGAGGTTG...TCTCACTGGAGGCACTAGACATGCAAGAGGAGAAGTCTCCAGATTATTCCAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR-3UTR CCA 90 bp TCATTTTCCTATCCATGGTGTAGAAATACATCTTCTGCCTTTTGCCTGGCAGGCGTAATTCCAGCACTTTaGGAAGCCGAGGTGGGCGGA +
Preference number: 2 (lower is better)
Translates to: SFSYPWCRNTSSAFCLAGVIPAL*EAEVGG
Trigger: TCCGCCCACCTCGGCTTCCCAAAGTGCTGGAATTAC...GCCTGCCAGGCAAAAGGCAGAAGATGTATTTCTACACCATGGATAGGAAAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR-3UTR CCA 90 bp TCATTTTCCTATCCATGGTGTAGAAATACATCTTCTGCCTTTTGCCTGGCAGGCTGTCTGAGCCTCAGCTaGGAAGACCAGAAAGCCTGG +
Preference number: 2 (lower is better)
Translates to: SFSYPWCRNTSSAFCLAGCLSLS*EDQKAW
Trigger: CCAGGCTTTCTGGTCTTCCCAGCTGAGGCTCAGACA...GCCTGCCAGGCAAAAGGCAGAAGATGTATTTCTACACCATGGATAGGAAAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR-3UTR TCA 90 bp CTACCACTGATGGAGACAAATGTGACTGAGGGCTTGAGGGCTTACTATTTAGCAGTGTTCTCACCATTCTaGGACACCTTCGGCTACACA +
Preference number: 2 (lower is better)
Translates to: LPLMETNVTEGLRAYYLAVFSPF*DTFGYT
Trigger: TGTGTAGCCGAAGGTGTCTCAGAATGGTGAGAACAC...TGCTAAATAGTAAGCCCTCAAGCCCTCAGTCACATTTGTCTCCATCAGTGGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR-3UTR CCA 90 bp CTACCACTGATGGAGACAAATGTGACTGAGGGCTTGAGGGCTTACTATTTAGCACTAGCTGATTGTGGTTaGCAGAAGTCTCAGATGGCC +
Preference number: 2 (lower is better)
Translates to: LPLMETNVTEGLRAYYLALADCG*QKSQMA
Trigger: GGCCATCTGAGACTTCTGCCAACCACAATCAGCTAG...TGCTAAATAGTAAGCCCTCAAGCCCTCAGTCACATTTGTCTCCATCAGTGGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR-3UTR CCA 90 bp GGCTGGAATAATCTGGAGACTTCTCCTCTTGCATGTCTAGTGCCTCCAGTGAGAGCTACTTTCTGTCTATaGACTTGCCTACTCTGGACA +
Preference number: 2 (lower is better)
Translates to: GWNNLETSPLACLVPPVRATFCL*TCLLWT
Trigger: TGTCCAGAGTAGGCAAGTCCATAGACAGAAAGTAGC...TCTCACTGGAGGCACTAGACATGCAAGAGGAGAAGTCTCCAGATTATTCCAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR-3UTR TCA 90 bp GTAGAATTTCTGGGTCATATGATAACCCTATGTTTGATTTTTGTGAAACTGCTGGGTGGGCGGATCACTTaGGCCCAGGAGTTCGAGACC +
Preference number: 2 (lower is better)
Translates to: VEFLGHMITLCLIFVKLLGGRIT*AQEFET
Trigger: GGTCTCGAACTCCTGGGCTCAAGTGATCCGCCCACC...CAGCAGTTTCACAAAAATCAAACATAGGGTTATCATATGACCCAGAAATTCTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR-3UTR GCA 90 bp TCATTTTCCTATCCATGGTGTAGAAATACATCTTCTGCCTTTTGCCTGGCAGGCGAACTATCATTTGGCTaGCCCAGGCCCACTAAATCC +
Preference number: 2 (lower is better)
Translates to: SFSYPWCRNTSSAFCLAGELSFG*PRPTKS
Trigger: GGATTTAGTGGGCCTGGGGCAGCCAAATGATAGTTC...GCCTGCCAGGCAAAAGGCAGAAGATGTATTTCTACACCATGGATAGGAAAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR-3UTR GCA 90 bp GGCTGGAATAATCTGGAGACTTCTCCTCTTGCATGTCTAGTGCCTCCAGTGAGACAAGGAACTGAATTCTaGCAACAACCATCTGAAGGT +
Preference number: 2 (lower is better)
Translates to: GWNNLETSPLACLVPPVRQGTEF*QQPSEG
Trigger: ACCTTCAGATGGTTGTTGGCAGAATTCAGTTCCTTG...TCTCACTGGAGGCACTAGACATGCAAGAGGAGAAGTCTCCAGATTATTCCAGCC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR-3UTR CCA 90 bp TCATTTTCCTATCCATGGTGTAGAAATACATCTTCTGCCTTTTGCCTGGCAGGCGTAATTCCAGCACTTTaGGAGGCCAAGATGGGTGGA +
Preference number: 2 (lower is better)
Translates to: SFSYPWCRNTSSAFCLAGVIPAL*EAKMGG
Trigger: TCCACCCATCTTGGCCTCCCAAAGTGCTGGAATTAC...GCCTGCCAGGCAAAAGGCAGAAGATGTATTTCTACACCATGGATAGGAAAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR-3UTR CCA 90 bp TATGAACTCTGTGGATCAGCAAATCACAGGGCACAGAAGGGAGAGCTTTTCTCTCTCAGCACTAACCTTTaGTATGGGTGGCTATGTCAC +
Preference number: 2 (lower is better)
Translates to: YELCGSANHRAQKGELFSLSTNL*YGWLCH
Trigger: GTGACATAGCCACCCATACCAAAGGTTAGTGCTGAG...AGAGAAAAGCTCTCCCTTCTGTGCCCTGTGATTTGCTGATCCACAGAGTTCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR CAA 90 bp TTTATAAGGGGAAGCTTGGGTCATCTCCTTCCTAGCAAGGACATCTaGCTATTCAACTCACAATTGTCACCACTCCTCTTGTTGACACGG +
Preference number: 2 (lower is better)
Translates to: FIRGSLGHLLPSKDI*LFNSQLSPLLLLTR
Trigger: CCGTGTCAACAAGAGGAGTGGTGACAATTGTGAGTTGAATAGCAAGATGTCCTTGCTAGGAAGGAGATGACCCAAGCTTCCCCTTATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR-3UTR TCA 90 bp TCATTTTCCTATCCATGGTGTAGAAATACATCTTCTGCCTTTTGCCTGGCAGGCCTGCTTCCTTTATGCTaGAAGGATTCACTGGGGACA +
Preference number: 2 (lower is better)
Translates to: SFSYPWCRNTSSAFCLAGLLPLC*KDSLGT
Trigger: TGTCCCCAGTGAATCCTTTCAGCATAAAGGAAGCAG...GCCTGCCAGGCAAAAGGCAGAAGATGTATTTCTACACCATGGATAGGAAAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR-3UTR TCA 90 bp AGGAGCTCCTGGGCCAGGCACTGCACTAACTATTGTACTTCTATTCCAGTAGACTACTTACTACTCATGTaGTCTTGGACAAGTCATCTG +
Preference number: 2 (lower is better)
Translates to: RSSWARHCTNYCTSIPVDYLLLM*SWTSHL
Trigger: CAGATGACTTGTCCAAGATCACATGAGTAGTAAGTA...GTCTACTGGAATAGAAGTACAATAGTTAGTGCAGTGCCTGGCCCAGGAGCTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR-3UTR TCA 90 bp TATGAACTCTGTGGATCAGCAAATCACAGGGCACAGAAGGGAGAGCTTTTCTCTCTGCTAATGGGACCTTaGGGACTCAAATTAGCCATA +
Preference number: 2 (lower is better)
Translates to: YELCGSANHRAQKGELFSLLMGP*GLKLAI
Trigger: TATGGCTAATTTGAGTCCTCAAGGTCCCATTAGCAG...AGAGAAAAGCTCTCCCTTCTGTGCCCTGTGATTTGCTGATCCACAGAGTTCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR-3UTR TCA 90 bp TCATTTTCCTATCCATGGTGTAGAAATACATCTTCTGCCTTTTGCCTGGCAGGCTCATCTTCTTCAGTTTaGGTTGGGACTGGCGCACTA +
Preference number: 2 (lower is better)
Translates to: SFSYPWCRNTSSAFCLAGSSSSV*VGTGAL
Trigger: TAGTGCGCCAGTCCCAACTCAAACTGAAGAAGATGA...GCCTGCCAGGCAAAAGGCAGAAGATGTATTTCTACACCATGGATAGGAAAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR-3UTR TCA 90 bp CTACCACTGATGGAGACAAATGTGACTGAGGGCTTGAGGGCTTACTATTTAGCATATACAGAACTAGCATaGGGGGAAGTCTCTGAAGAC +
Preference number: 2 (lower is better)
Translates to: LPLMETNVTEGLRAYYLAYTELA*GEVSED
Trigger: GTCTTCAGAGACTTCCCCTCATGCTAGTTCTGTATA...TGCTAAATAGTAAGCCCTCAAGCCCTCAGTCACATTTGTCTCCATCAGTGGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR-3UTR TCA 90 bp GGCTGGAATAATCTGGAGACTTCTCCTCTTGCATGTCTAGTGCCTCCAGTGAGAATGAATTCGCTGATGTaGCATTATGTAAAGCAGCAG +
Preference number: 2 (lower is better)
Translates to: GWNNLETSPLACLVPPVRMNSLM*HYVKQQ
Trigger: CTGCTGCTTTACATAATGTCACATCAGCGAATTCAT...TCTCACTGGAGGCACTAGACATGCAAGAGGAGAAGTCTCCAGATTATTCCAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR-3UTR TCA 90 bp TCATTTTCCTATCCATGGTGTAGAAATACATCTTCTGCCTTTTGCCTGGCAGGCTTGAGACCAGGAGTTTaGGACCAGTCTGGACAACAT +
Preference number: 2 (lower is better)
Translates to: SFSYPWCRNTSSAFCLAGLRPGV*DQSGQH
Trigger: ATGTTGTCCAGACTGGTCTCAAACTCCTGGTCTCAA...GCCTGCCAGGCAAAAGGCAGAAGATGTATTTCTACACCATGGATAGGAAAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR-3UTR CCA 90 bp CTACCACTGATGGAGACAAATGTGACTGAGGGCTTGAGGGCTTACTATTTAGCAGCTGAAAGGATTCACTaGGGACATCACTGTTTCCAT +
Preference number: 2 (lower is better)
Translates to: LPLMETNVTEGLRAYYLAAERIH*GHHCFH
Trigger: ATGGAAACAGTGATGTCCCCAGTGAATCCTTTCAGC...TGCTAAATAGTAAGCCCTCAAGCCCTCAGTCACATTTGTCTCCATCAGTGGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR-3UTR CCA 90 bp CTACCACTGATGGAGACAAATGTGACTGAGGGCTTGAGGGCTTACTATTTAGCAGGTTCTGGAGGCTTGTaGAGTGCAAATTGTCATGAA +
Preference number: 2 (lower is better)
Translates to: LPLMETNVTEGLRAYYLAGSGGL*SANCHE
Trigger: TTCATGACAATTTGCACTCCACAAGCCTCCAGAACC...TGCTAAATAGTAAGCCCTCAAGCCCTCAGTCACATTTGTCTCCATCAGTGGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR-3UTR CCA 90 bp CTACCACTGATGGAGACAAATGTGACTGAGGGCTTGAGGGCTTACTATTTAGCATTATGCTCAAGGTTCTaGAGGCTTGTGGAGTGCAAA +
Preference number: 2 (lower is better)
Translates to: LPLMETNVTEGLRAYYLALCSRF*RLVECK
Trigger: TTTGCACTCCACAAGCCTCCAGAACCTTGAGCATAA...TGCTAAATAGTAAGCCCTCAAGCCCTCAGTCACATTTGTCTCCATCAGTGGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR-3UTR CCA 90 bp TATGAACTCTGTGGATCAGCAAATCACAGGGCACAGAAGGGAGAGCTTTTCTCTCTCAAATGGCAGGGCTaGAATAATCTGGAGACTTCT +
Preference number: 2 (lower is better)
Translates to: YELCGSANHRAQKGELFSLKWQG*NNLETS
Trigger: AGAAGTCTCCAGATTATTCCAGCCCTGCCATTTGAG...AGAGAAAAGCTCTCCCTTCTGTGCCCTGTGATTTGCTGATCCACAGAGTTCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR-3UTR TCA 90 bp TATGAACTCTGTGGATCAGCAAATCACAGGGCACAGAAGGGAGAGCTTTTCTCTGATGCGCCTGTTACATaGTTCAGAGAAGACAGTTTT +
Preference number: 2 (lower is better)
Translates to: YELCGSANHRAQKGELFSDAPVT*FREDSF
Trigger: AAAACTGTCTTCTCTGAATCATGTAACAGGCGCATC...AGAGAAAAGCTCTCCCTTCTGTGCCCTGTGATTTGCTGATCCACAGAGTTCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR-3UTR TCA 90 bp CTACCACTGATGGAGACAAATGTGACTGAGGGCTTGAGGGCTTACTATTTAGCACAATTCTCTCTGGTCTaGTCTTTGTTAAGCTCTGAC +
Preference number: 2 (lower is better)
Translates to: LPLMETNVTEGLRAYYLAQFSLV*SLLSSD
Trigger: GTCAGAGCTTAACAAAGATCAGACCAGAGAGAATTG...TGCTAAATAGTAAGCCCTCAAGCCCTCAGTCACATTTGTCTCCATCAGTGGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR-3UTR TCA 90 bp GTAGAATTTCTGGGTCATATGATAACCCTATGTTTGATTTTTGTGAAACTGCTGTGGGAAGAAACCCCGTaGGGCTCAAACGCTGACCTG +
Preference number: 2 (lower is better)
Translates to: VEFLGHMITLCLIFVKLLWEETP*GSNADL
Trigger: CAGGTCAGCGTTTGAGCCTCACGGGGTTTCTTCCCA...CAGCAGTTTCACAAAAATCAAACATAGGGTTATCATATGACCCAGAAATTCTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR-3UTR TCA 90 bp TATGAACTCTGTGGATCAGCAAATCACAGGGCACAGAAGGGAGAGCTTTTCTCTCTAACAAAAGAATGTTaGAGGCGGACAAGATTTGGG +
Preference number: 2 (lower is better)
Translates to: YELCGSANHRAQKGELFSLTKEC*RRTRFG
Trigger: CCCAAATCTTGTCCGCCTTCAACATTCTTTTGTTAG...AGAGAAAAGCTCTCCCTTCTGTGCCCTGTGATTTGCTGATCCACAGAGTTCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR-3UTR TCA 90 bp CTACCACTGATGGAGACAAATGTGACTGAGGGCTTGAGGGCTTACTATTTAGCAGCCTTGGTTCAAATCTaGGCTTTGTCACTTTCTAGT +
Preference number: 2 (lower is better)
Translates to: LPLMETNVTEGLRAYYLAALVQI*ALSLSS
Trigger: ACTAGAAAGTGACAAAGCTCAGATTTGAACCAAGGC...TGCTAAATAGTAAGCCCTCAAGCCCTCAGTCACATTTGTCTCCATCAGTGGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR-3UTR TCA 90 bp TATGAACTCTGTGGATCAGCAAATCACAGGGCACAGAAGGGAGAGCTTTTCTCTGATACAAAACTAGAATaGGGTACAGTCCCTGAAGAC +
Preference number: 2 (lower is better)
Translates to: YELCGSANHRAQKGELFSDTKLE*GTVPED
Trigger: GTCTTCAGGGACTGTACCTCATTCTAGTTTTGTATC...AGAGAAAAGCTCTCCCTTCTGTGCCCTGTGATTTGCTGATCCACAGAGTTCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR-3UTR TCA 90 bp TCATTTTCCTATCCATGGTGTAGAAATACATCTTCTGCCTTTTGCCTGGCAGGCACAACTGCAAGGAACTaGATTCTGCCAACAACCATC +
Preference number: 2 (lower is better)
Translates to: SFSYPWCRNTSSAFCLAGTTARN*ILPTTI
Trigger: GATGGTTGTTGGCAGAATTCAGTTCCTTGCAGTTGT...GCCTGCCAGGCAAAAGGCAGAAGATGTATTTCTACACCATGGATAGGAAAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR-3UTR GCA 90 bp GGCTGGAATAATCTGGAGACTTCTCCTCTTGCATGTCTAGTGCCTCCAGTGAGACTAGCAAGGACATCTTaGTATTCAACTCACAATTGT +
Preference number: 2 (lower is better)
Translates to: GWNNLETSPLACLVPPVRLARTS*YSTHNC
Trigger: ACAATTGTGAGTTGAATAGCAAGATGTCCTTGCTAG...TCTCACTGGAGGCACTAGACATGCAAGAGGAGAAGTCTCCAGATTATTCCAGCC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR CAA 90 bp AAGGACATCTTGCTATTCAACTCACAATTGTCACCACTCCTCTTGTaGACACGGTTTCATAGCACTCTTCGTTCCAGGCTAAAGTTTCCT +
Preference number: 2 (lower is better)
Translates to: KDILLFNSQLSPLLL*TRFHSTLRSRLKFP
Trigger: AGGAAACTTTAGCCTGGAACGAAGAGTGCTATGAAACCGTGTCAACAAGAGGAGTGGTGACAATTGTGAGTTGAATAGCAAGATGTCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR CAA 90 bp AGCAAGGACATCTTGCTATTCAACTCACAATTGTCACCACTCCTCTaGTTGACACGGTTTCATAGCACTCTTCGTTCCAGGCTAAAGTTT +
Preference number: 2 (lower is better)
Translates to: SKDILLFNSQLSPLL*LTRFHSTLRSRLKF
Trigger: AAACTTTAGCCTGGAACGAAGAGTGCTATGAAACCGTGTCAACAAGAGGAGTGGTGACAATTGTGAGTTGAATAGCAAGATGTCCTTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR-3UTR TCA 90 bp TCATTTTCCTATCCATGGTGTAGAAATACATCTTCTGCCTTTTGCCTGGCAGGCGAGTACACAGCAGCCTaGACCTATGAAAGATATAAC +
Preference number: 2 (lower is better)
Translates to: SFSYPWCRNTSSAFCLAGEYTAA*TYERYN
Trigger: GTTATATCTTTCATAGGTTCAGGCTGCTGTGTACTC...GCCTGCCAGGCAAAAGGCAGAAGATGTATTTCTACACCATGGATAGGAAAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR-3UTR TCA 90 bp GTAGAATTTCTGGGTCATATGATAACCCTATGTTTGATTTTTGTGAAACTGCTGCAGCCTGGCTCTGAATaGGTACACAGCAGCCTGAAC +
Preference number: 2 (lower is better)
Translates to: VEFLGHMITLCLIFVKLLQPGSE*VHSSLN
Trigger: GTTCAGGCTGCTGTGTACTCATTCAGAGCCAGGCTG...CAGCAGTTTCACAAAAATCAAACATAGGGTTATCATATGACCCAGAAATTCTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR-3UTR TCA 90 bp TATGAACTCTGTGGATCAGCAAATCACAGGGCACAGAAGGGAGAGCTTTTCTCTAATTCATGTTTAAAATaGGTGGGCAGCAGGAACACA +
Preference number: 2 (lower is better)
Translates to: YELCGSANHRAQKGELFSNSCLK*VGSRNT
Trigger: TGTGTTCCTGCTGCCCACTCATTTTAAACATGAATT...AGAGAAAAGCTCTCCCTTCTGTGCCCTGTGATTTGCTGATCCACAGAGTTCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR-3UTR TCA 90 bp CTACCACTGATGGAGACAAATGTGACTGAGGGCTTGAGGGCTTACTATTTAGCAAATCTAAGTTGGGAGTaGAGTAGAAGGAGGACAAAT +
Preference number: 2 (lower is better)
Translates to: LPLMETNVTEGLRAYYLANLSWE*SRRRTN
Trigger: ATTTGTCCTCCTTCTACTTCACTCCCAACTTAGATT...TGCTAAATAGTAAGCCCTCAAGCCCTCAGTCACATTTGTCTCCATCAGTGGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR-3UTR GCA 90 bp TATGAACTCTGTGGATCAGCAAATCACAGGGCACAGAAGGGAGAGCTTTTCTCTAATGATACTGGTTTATaGTCAAGGTTCTGGAGGCTT +
Preference number: 2 (lower is better)
Translates to: YELCGSANHRAQKGELFSNDTGL*SRFWRL
Trigger: AAGCCTCCAGAACCTTGAGCATAAACCAGTATCATT...AGAGAAAAGCTCTCCCTTCTGTGCCCTGTGATTTGCTGATCCACAGAGTTCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR-3UTR GCA 90 bp GTAGAATTTCTGGGTCATATGATAACCCTATGTTTGATTTTTGTGAAACTGCTGGGTGTCTGCTCATTGTaGGCCAGGGCTGAAGTCATG +
Preference number: 2 (lower is better)
Translates to: VEFLGHMITLCLIFVKLLGVCSL*ARAEVM
Trigger: CATGACTTCAGCCCTGGCGCACAATGAGCAGACACC...CAGCAGTTTCACAAAAATCAAACATAGGGTTATCATATGACCCAGAAATTCTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR-3UTR CCA 90 bp CTACCACTGATGGAGACAAATGTGACTGAGGGCTTGAGGGCTTACTATTTAGCAGCTCTGCAAAACATCTaGGACATATGTTTCTGGAAA +
Preference number: 2 (lower is better)
Translates to: LPLMETNVTEGLRAYYLAALQNI*DICFWK
Trigger: TTTCCAGAAACATATGTCCCAGATGTTTTGCAGAGC...TGCTAAATAGTAAGCCCTCAAGCCCTCAGTCACATTTGTCTCCATCAGTGGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR-3UTR CCA 90 bp TCATTTTCCTATCCATGGTGTAGAAATACATCTTCTGCCTTTTGCCTGGCAGGCTGTTCTAAGAGAAACTaGAAGGGACAAGCTAGCTAC +
Preference number: 2 (lower is better)
Translates to: SFSYPWCRNTSSAFCLAGCSKRN*KGQASY
Trigger: GTAGCTAGCTTGTCCCTTCCAGTTTCTCTTAGAACA...GCCTGCCAGGCAAAAGGCAGAAGATGTATTTCTACACCATGGATAGGAAAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR CAA 90 bp TCGTTCCAGGCTAAAGTTTCCTGTCATGATTTTTGGGCATCCTTTTaGAAACAGTTAGACATTCTGACCTGGCAAGCTACTGAGACCTTT +
Preference number: 2 (lower is better)
Translates to: SFQAKVSCHDFWASF*KQLDILTWQATETF
Trigger: AAAGGTCTCAGTAGCTTGCCAGGTCAGAATGTCTAACTGTTTCAAAAAGGATGCCCAAAAATCATGACAGGAAACTTTAGCCTGGAACGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR-3UTR TCA 90 bp CTACCACTGATGGAGACAAATGTGACTGAGGGCTTGAGGGCTTACTATTTAGCAAGTATAATGAGGTCCTaGGATCAAAACGTTTGTGAA +
Preference number: 2 (lower is better)
Translates to: LPLMETNVTEGLRAYYLASIMRS*DQNVCE
Trigger: TTCACAAACGTTTTGATCTCAGGACCTCATTATACT...TGCTAAATAGTAAGCCCTCAAGCCCTCAGTCACATTTGTCTCCATCAGTGGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR-3UTR GCA 90 bp TCATTTTCCTATCCATGGTGTAGAAATACATCTTCTGCCTTTTGCCTGGCAGGCAAAAGGATTCAGAGTTaGAGATCAGAACTCAGCCTT +
Preference number: 2 (lower is better)
Translates to: SFSYPWCRNTSSAFCLAGKRIQS*RSELSL
Trigger: AAGGCTGAGTTCTGATCTGCAACTCTGAATCCTTTT...GCCTGCCAGGCAAAAGGCAGAAGATGTATTTCTACACCATGGATAGGAAAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR-3UTR CCA 90 bp TATGAACTCTGTGGATCAGCAAATCACAGGGCACAGAAGGGAGAGCTTTTCTCTAAATATTATAAAAAGTaGAACAAGGGCCGGACGTGT +
Preference number: 2 (lower is better)
Translates to: YELCGSANHRAQKGELFSKYYKK*NKGRTC
Trigger: ACACGTCCGGCCCTTGTTCCACTTTTTATAATATTT...AGAGAAAAGCTCTCCCTTCTGTGCCCTGTGATTTGCTGATCCACAGAGTTCATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR-3UTR CCA 90 bp TATGAACTCTGTGGATCAGCAAATCACAGGGCACAGAAGGGAGAGCTTTTCTCTAAAACCTTCTTTGCCTaGATTTCTAACCTACAGAGA +
Preference number: 2 (lower is better)
Translates to: YELCGSANHRAQKGELFSKTFFA*ISNLQR
Trigger: TCTCTGTAGGTTAGAAATCCAGGCAAAGAAGGTTTT...AGAGAAAAGCTCTCCCTTCTGTGCCCTGTGATTTGCTGATCCACAGAGTTCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR-3UTR TCA 90 bp GTAGAATTTCTGGGTCATATGATAACCCTATGTTTGATTTTTGTGAAACTGCTGGATAGGAGGATTCCTTaGGACCAGGAGTTTGAGACC +
Preference number: 2 (lower is better)
Translates to: VEFLGHMITLCLIFVKLLDRRIP*DQEFET
Trigger: GGTCTCAAACTCCTGGTCTCAAGGAATCCTCCTATC...CAGCAGTTTCACAAAAATCAAACATAGGGTTATCATATGACCCAGAAATTCTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR-3UTR GCA 90 bp TCATTTTCCTATCCATGGTGTAGAAATACATCTTCTGCCTTTTGCCTGGCAGGCAAAGGTCAAGTAACTTaGCAGAAAAGGGATAGAGTT +
Preference number: 2 (lower is better)
Translates to: SFSYPWCRNTSSAFCLAGKGQVT*QKRDRV
Trigger: AACTCTATCCCTTTTCTGGCAAGTTACTTGACCTTT...GCCTGCCAGGCAAAAGGCAGAAGATGTATTTCTACACCATGGATAGGAAAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR-3UTR CCA 90 bp GTAGAATTTCTGGGTCATATGATAACCCTATGTTTGATTTTTGTGAAACTGCTGAAGGCGGACAAGATTTaGGTGTCTGCTCATTGTGCG +
Preference number: 2 (lower is better)
Translates to: VEFLGHMITLCLIFVKLLKADKI*VSAHCA
Trigger: CGCACAATGAGCAGACACCCAAATCTTGTCCGCCTT...CAGCAGTTTCACAAAAATCAAACATAGGGTTATCATATGACCCAGAAATTCTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR CAA 90 bp ATACACCTATGGGTAGAATTTCTGGGTCATATGATAACCCTATGTTaGATTTTTGTGAAACTGCTGAACTGTTTTCCACAGCTGCTGCAC +
Preference number: 2 (lower is better)
Translates to: IHLWVEFLGHMITLC*IFVKLLNCFPQLLH
Trigger: GTGCAGCAGCTGTGGAAAACAGTTCAGCAGTTTCACAAAAATCAAACATAGGGTTATCATATGACCCAGAAATTCTACCCATAGGTGTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR-3UTR TCA 90 bp GTAGAATTTCTGGGTCATATGATAACCCTATGTTTGATTTTTGTGAAACTGCTGGGCGCACTATCTTTCTaGATGTCACAGAAATGCACA +
Preference number: 2 (lower is better)
Translates to: VEFLGHMITLCLIFVKLLGALSF*MSQKCT
Trigger: TGTGCATTTCTGTGACATTCAGAAAGATAGTGCGCC...CAGCAGTTTCACAAAAATCAAACATAGGGTTATCATATGACCCAGAAATTCTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR-3UTR GCA 90 bp GTAGAATTTCTGGGTCATATGATAACCCTATGTTTGATTTTTGTGAAACTGCTGGTTTTCCACAGCTGCTaGACCATTCTACATTCCTAC +
Preference number: 2 (lower is better)
Translates to: VEFLGHMITLCLIFVKLLVFHSC*TILHSY
Trigger: GTAGGAATGTAGAATGGTGCAGCAGCTGTGGAAAAC...CAGCAGTTTCACAAAAATCAAACATAGGGTTATCATATGACCCAGAAATTCTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR-3UTR GCA 90 bp GTAGAATTTCTGGGTCATATGATAACCCTATGTTTGATTTTTGTGAAACTGCTGACTGTTTTCCACAGCTaGTGCACCATTCTACATTCC +
Preference number: 2 (lower is better)
Translates to: VEFLGHMITLCLIFVKLLTVFHS*CTILHS
Trigger: GGAATGTAGAATGGTGCAGCAGCTGTGGAAAACAGT...CAGCAGTTTCACAAAAATCAAACATAGGGTTATCATATGACCCAGAAATTCTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR-3UTR CCA 90 bp GTAGAATTTCTGGGTCATATGATAACCCTATGTTTGATTTTTGTGAAACTGCTGAGAGTGCTAGAGGGATaGGCCCTAACAAAAGAATGT +
Preference number: 2 (lower is better)
Translates to: VEFLGHMITLCLIFVKLLRVLEG*ALTKEC
Trigger: ACATTCTTTTGTTAGGGCCCATCCCTCTAGCACTCT...CAGCAGTTTCACAAAAATCAAACATAGGGTTATCATATGACCCAGAAATTCTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR-3UTR TCA 90 bp GTAGAATTTCTGGGTCATATGATAACCCTATGTTTGATTTTTGTGAAACTGCTGCCATCTGAAGGTATCTaGAAAGGATTCAGAGTTGCA +
Preference number: 2 (lower is better)
Translates to: VEFLGHMITLCLIFVKLLPSEGI*KGFRVA
Trigger: TGCAACTCTGAATCCTTTTCAGATACCTTCAGATGG...CAGCAGTTTCACAAAAATCAAACATAGGGTTATCATATGACCCAGAAATTCTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR-3UTR CCA 90 bp GTAGAATTTCTGGGTCATATGATAACCCTATGTTTGATTTTTGTGAAACTGCTGTTCTTCAGTTTGAGTTaGGACTGGCGCACTATCTTT +
Preference number: 2 (lower is better)
Translates to: VEFLGHMITLCLIFVKLLFFSLS*DWRTIF
Trigger: AAAGATAGTGCGCCAGTCCCAACTCAAACTGAAGAA...CAGCAGTTTCACAAAAATCAAACATAGGGTTATCATATGACCCAGAAATTCTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR GCA 72 bp GTTGAAGGCGGACAAGATTTGGGTGTCTGCTCATTGTaGGCCAGGGCTGAAGTCATGGGAAGAAACCCCGTG +
Preference number: 3 (lower is better)
Translates to: VEGGQDLGVCSL*ARAEVMGRNPV
Trigger: CACGGGGTTTCTTCCCATGACTTCAGCCCTGGCGCACAATGAGCAGACACCCAAATCTTGTCCGCCTTCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR CCA 72 bp AGGTGTCTGAGCCTCAGCTGGGAAGACCAGAAAGCCTaGAGTGACTCAAATGGCAGGGCTGGAATAATCTGG +
Preference number: 3 (lower is better)
Translates to: RCLSLSWEDQKA*SDSNGRAGIIW
Trigger: CCAGATTATTCCAGCCCTGCCATTTGAGTCACTCCAGGCTTTCTGGTCTTCCCAGCTGAGGCTCAGACACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR CCA 72 bp GAGCTTTTCTCTCTTCCAAGGTGTCTGAGCCTCAGCTaGGAAGACCAGAAAGCCTGGAGTGACTCAAATGGC +
Preference number: 3 (lower is better)
Translates to: ELFSLPRCLSLS*EDQKAWSDSNG
Trigger: GCCATTTGAGTCACTCCAGGCTTTCTGGTCTTCCCAGCTGAGGCTCAGACACCTTGGAAGAGAGAAAAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR-3UTR CAA 90 bp TCATTTTCCTATCCATGGTGTAGAAATACATCTTCTGCCTTTTGCCTGGCAGGCTGCACAGCAGGGAAATaGTGCCACCAGCCCCCTCTG +
Preference number: 3 (lower is better)
Translates to: SFSYPWCRNTSSAFCLAGCTAGK*CHQPPL
Trigger: CAGAGGGGGCTGGTGGCACAATTTCCCTGCTGTGCA...GCCTGCCAGGCAAAAGGCAGAAGATGTATTTCTACACCATGGATAGGAAAATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR TCA 72 bp ACCAGGGGAGCTACCACTGATGGAGACAAATGTGACTaGGGGCTTGAGGGCTTACTATTTAGCAGGCTCTGT +
Preference number: 3 (lower is better)
Translates to: TRGATTDGDKCD*GLEGLLFSRLC
Trigger: ACAGAGCCTGCTAAATAGTAAGCCCTCAAGCCCTCAGTCACATTTGTCTCCATCAGTGGTAGCTCCCCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR CCA 72 bp GGCCCTAACAAAAGAATGTTGAAGGCGGACAAGATTTaGGTGTCTGCTCATTGTGCGCCAGGGCTGAAGTCA +
Preference number: 3 (lower is better)
Translates to: GPNKRMLKADKI*VSAHCAPGLKS
Trigger: TGACTTCAGCCCTGGCGCACAATGAGCAGACACCCAAATCTTGTCCGCCTTCAACATTCTTTTGTTAGGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR-3UTR CAA 90 bp TCTCACCATTCTGAGACACCTTCGGCTACACATTTCTCCAGCCAAAAACCTAGGATGGAATTCCTGTTTTaGAGGAGCTCCTGGGCCAGG +
Preference number: 3 (lower is better)
Translates to: SHHSETPSATHFSSQKPRMEFLF*RSSWAR
Trigger: CCTGGCCCAGGAGCTCCTCAAAAACAGGAATTCCAT...CCTAGGTTTTTGGCTGGAGAAATGTGTAGCCGAAGGTGTCTCAGAATGGTGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR-3UTR CAA 90 bp GGCTGGAATAATCTGGAGACTTCTCCTCTTGCATGTCTAGTGCCTCCAGTGAGACTTGAGACCAGGAGTTaGAGACCAGTCTGGACAACA +
Preference number: 3 (lower is better)
Translates to: GWNNLETSPLACLVPPVRLETRS*RPVWTT
Trigger: TGTTGTCCAGACTGGTCTCAAACTCCTGGTCTCAAG...TCTCACTGGAGGCACTAGACATGCAAGAGGAGAAGTCTCCAGATTATTCCAGCC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR-3UTR CAA 90 bp GGCTGGAATAATCTGGAGACTTCTCCTCTTGCATGTCTAGTGCCTCCAGTGAGACAAGGTTCTGGAGGCTaGTGGAGTGCAAATTGTCAT +
Preference number: 3 (lower is better)
Translates to: GWNNLETSPLACLVPPVRQGSGG*WSANCH
Trigger: ATGACAATTTGCACTCCACAAGCCTCCAGAACCTTG...TCTCACTGGAGGCACTAGACATGCAAGAGGAGAAGTCTCCAGATTATTCCAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR-3UTR CAA 90 bp AGGAGCTCCTGGGCCAGGCACTGCACTAACTATTGTACTTCTATTCCAGTAGACCAGGTTTACCTGAACTaGAATTCTGGCTTTGCTACT +
Preference number: 3 (lower is better)
Translates to: RSSWARHCTNYCTSIPVDQVYLN*NSGFAT
Trigger: AGTAGCAAAGCCAGAATTCAAGTTCAGGTAAACCTG...GTCTACTGGAATAGAAGTACAATAGTTAGTGCAGTGCCTGGCCCAGGAGCTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR-3UTR CAA 90 bp TCATTTTCCTATCCATGGTGTAGAAATACATCTTCTGCCTTTTGCCTGGCAGGCACAATGAACTATCATTaGGCTGCCCCAGGCCCACTA +
Preference number: 3 (lower is better)
Translates to: SFSYPWCRNTSSAFCLAGTMNYH*AAPGPL
Trigger: TAGTGGGCCTGGGGCAGCCAAATGATAGTTCATTGT...GCCTGCCAGGCAAAAGGCAGAAGATGTATTTCTACACCATGGATAGGAAAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR-3UTR CAA 90 bp CTACCACTGATGGAGACAAATGTGACTGAGGGCTTGAGGGCTTACTATTTAGCACTTCTTCAGTTTGAGTaGGGACTGGCGCACTATCTT +
Preference number: 3 (lower is better)
Translates to: LPLMETNVTEGLRAYYLALLQFE*GLAHYL
Trigger: AAGATAGTGCGCCAGTCCCAACTCAAACTGAAGAAG...TGCTAAATAGTAAGCCCTCAAGCCCTCAGTCACATTTGTCTCCATCAGTGGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR-3UTR CAA 90 bp TCATTTTCCTATCCATGGTGTAGAAATACATCTTCTGCCTTTTGCCTGGCAGGCCTCATCTTCTTCAGTTaGAGTTGGGACTGGCGCACT +
Preference number: 3 (lower is better)
Translates to: SFSYPWCRNTSSAFCLAGLIFFS*SWDWRT
Trigger: AGTGCGCCAGTCCCAACTCAAACTGAAGAAGATGAG...GCCTGCCAGGCAAAAGGCAGAAGATGTATTTCTACACCATGGATAGGAAAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR-3UTR CAA 90 bp CTACCACTGATGGAGACAAATGTGACTGAGGGCTTGAGGGCTTACTATTTAGCATTGTCACCACTCCTCTaGTTGACACGGTTTCATAGC +
Preference number: 3 (lower is better)
Translates to: LPLMETNVTEGLRAYYLALSPLL*LTRFHS
Trigger: GCTATGAAACCGTGTCAACAAGAGGAGTGGTGACAA...TGCTAAATAGTAAGCCCTCAAGCCCTCAGTCACATTTGTCTCCATCAGTGGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR-3UTR CAA 90 bp CTACCACTGATGGAGACAAATGTGACTGAGGGCTTGAGGGCTTACTATTTAGCATTTATAAGGGGAAGCTaGGGTCATCTCCTTCCTAGC +
Preference number: 3 (lower is better)
Translates to: LPLMETNVTEGLRAYYLAFIRGS*GHLLPS
Trigger: GCTAGGAAGGAGATGACCCAAGCTTCCCCTTATAAA...TGCTAAATAGTAAGCCCTCAAGCCCTCAGTCACATTTGTCTCCATCAGTGGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR-3UTR CAA 90 bp GGCTGGAATAATCTGGAGACTTCTCCTCTTGCATGTCTAGTGCCTCCAGTGAGAATGAAGACAAAGACTTaGTGGGTGGGGCAAAATCTA +
Preference number: 3 (lower is better)
Translates to: GWNNLETSPLACLVPPVRMKTKT*WVGQNL
Trigger: TAGATTTTGCCCCACCCACAAAGTCTTTGTCTTCAT...TCTCACTGGAGGCACTAGACATGCAAGAGGAGAAGTCTCCAGATTATTCCAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR-3UTR CAA 90 bp GGCTGGAATAATCTGGAGACTTCTCCTCTTGCATGTCTAGTGCCTCCAGTGAGAAGAATCATGCATTTGTaGTCTTTTGTGGCTGGCTTC +
Preference number: 3 (lower is better)
Translates to: GWNNLETSPLACLVPPVRRIMHL*SFVAGF
Trigger: GAAGCCAGCCACAAAAGACAACAAATGCATGATTCT...TCTCACTGGAGGCACTAGACATGCAAGAGGAGAAGTCTCCAGATTATTCCAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR TCA 72 bp CATTTCTCCAGCCAAAAACCTAGGAAGATGTCCGGCTaGCAGATGCGCCTGTTACATGATTCAGAGAAGACA +
Preference number: 3 (lower is better)
Translates to: HFSSQKPRKMSG*QMRLLHDSEKT
Trigger: TGTCTTCTCTGAATCATGTAACAGGCGCATCTGTCAGCCGGACATCTTCCTAGGTTTTTGGCTGGAGAAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR TCA 72 bp TCTACAATTCTCTCTGGTCTGATCTTTGTTAAGCTCTaGCCTGACAGAAGCCTCTGCAGCAGGATTACCTGT +
Preference number: 3 (lower is better)
Translates to: STILSGLIFVKL*PDRSLCSRITC
Trigger: ACAGGTAATCCTGCTGCAGAGGCTTCTGTCAGGTCAGAGCTTAACAAAGATCAGACCAGAGAGAATTGTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR TCA 72 bp CAGGAAGATGCAATAACACATGTCTCAGCCTGGCTCTaGATGAGTACACAGCAGCCTGAACCTATGAAAGAT +
Preference number: 3 (lower is better)
Translates to: QEDAITHVSAWL*MSTQQPEPMKD
Trigger: ATCTTTCATAGGTTCAGGCTGCTGTGTACTCATTCAGAGCCAGGCTGAGACATGTGTTATTGCATCTTCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR GCA 72 bp GAATTCCTGTTTTTGAGGAGCTCCTGGGCCAGGCACTaGACTAACTATTGTACTTCTATTCCAGTAGACATG +
Preference number: 3 (lower is better)
Translates to: EFLFLRSSWARH*TNYCTSIPVDM
Trigger: CATGTCTACTGGAATAGAAGTACAATAGTTAGTGCAGTGCCTGGCCCAGGAGCTCCTCAAAAACAGGAATTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR GCA 72 bp GAAGCTTGGGTCATCTCCTTCCTAGCAAGGACATCTTaGTATTCAACTCACAATTGTCACCACTCCTCTTGT +
Preference number: 3 (lower is better)
Translates to: EAWVISFLARTS*YSTHNCHHSSC
Trigger: ACAAGAGGAGTGGTGACAATTGTGAGTTGAATAGCAAGATGTCCTTGCTAGGAAGGAGATGACCCAAGCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR CCA 72 bp GGGAAGGAAATGGAATTCCTGTTTTTGAGGAGCTCCTaGGCCAGGCACTGCACTAACTATTGTACTTCTATT +
Preference number: 3 (lower is better)
Translates to: GKEMEFLFLRSS*ARHCTNYCTSI
Trigger: AATAGAAGTACAATAGTTAGTGCAGTGCCTGGCCCAGGAGCTCCTCAAAAACAGGAATTCCATTTCCTTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR-3UTR CAA 90 bp GGCTGGAATAATCTGGAGACTTCTCCTCTTGCATGTCTAGTGCCTCCAGTGAGATTTTGGGCATCCTTTTaGAAACAGTTAGACATTCTG +
Preference number: 3 (lower is better)
Translates to: GWNNLETSPLACLVPPVRFWASF*KQLDIL
Trigger: CAGAATGTCTAACTGTTTCAAAAAGGATGCCCAAAA...TCTCACTGGAGGCACTAGACATGCAAGAGGAGAAGTCTCCAGATTATTCCAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR-3UTR CAA 90 bp TCATTTTCCTATCCATGGTGTAGAAATACATCTTCTGCCTTTTGCCTGGCAGGCATTTTCTGGGTTTTCTaGGACTATAGCCACCCTAGG +
Preference number: 3 (lower is better)
Translates to: SFSYPWCRNTSSAFCLAGIFWVF*DYSHPR
Trigger: CCTAGGGTGGCTATAGTCCAAGAAAACCCAGAAAAT...GCCTGCCAGGCAAAAGGCAGAAGATGTATTTCTACACCATGGATAGGAAAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR TCA 72 bp GGAACTGAATTCTGCCAACAACCATCTGAAGGTATCTaGAAAGGATTCAGAGTTGCAGATCAGAACTCAGCC +
Preference number: 3 (lower is better)
Translates to: GTEFCQQPSEGI*KGFRVADQNSA
Trigger: GGCTGAGTTCTGATCTGCAACTCTGAATCCTTTTCAGATACCTTCAGATGGTTGTTGGCAGAATTCAGTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR TCA 72 bp AGCAGGCTCTGTGCTAAACACTGTACATACATCATCTaGATGTTTAGTGCTCCCTACAACTCTAACGCAGGT +
Preference number: 3 (lower is better)
Translates to: SRLCAKHCTYII*MFSAPYNSNAG
Trigger: ACCTGCGTTAGAGTTGTAGGGAGCACTAAACATTCAGATGATGTATGTACAGTGTTTAGCACAGAGCCTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR-3UTR CAA 90 bp CTACCACTGATGGAGACAAATGTGACTGAGGGCTTGAGGGCTTACTATTTAGCAAGCAAGAAATTTTTGTaGAAGAGCTGGCTTAGGTTG +
Preference number: 3 (lower is better)
Translates to: LPLMETNVTEGLRAYYLASKKFL*KSWLRL
Trigger: CAACCTAAGCCAGCTCTTCAACAAAAATTTCTTGCT...TGCTAAATAGTAAGCCCTCAAGCCCTCAGTCACATTTGTCTCCATCAGTGGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR-3UTR CAA 90 bp GTAGAATTTCTGGGTCATATGATAACCCTATGTTTGATTTTTGTGAAACTGCTGAGGCACAAGAATCGCTaGAAGCCAGGAGGCAGAGGT +
Preference number: 3 (lower is better)
Translates to: VEFLGHMITLCLIFVKLLRHKNR*KPGGRG
Trigger: ACCTCTGCCTCCTGGCTTCAAGCGATTCTTGTGCCT...CAGCAGTTTCACAAAAATCAAACATAGGGTTATCATATGACCCAGAAATTCTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR-3UTR CAA 90 bp TCATTTTCCTATCCATGGTGTAGAAATACATCTTCTGCCTTTTGCCTGGCAGGCCAGCCTTTTGAGATCTaGAGCAGAAAACCTTCTTTG +
Preference number: 3 (lower is better)
Translates to: SFSYPWCRNTSSAFCLAGQPFEI*SRKPSL
Trigger: CAAAGAAGGTTTTCTGCTCAAGATCTCAAAAGGCTG...GCCTGCCAGGCAAAAGGCAGAAGATGTATTTCTACACCATGGATAGGAAAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR-3UTR CAA 90 bp TATGAACTCTGTGGATCAGCAAATCACAGGGCACAGAAGGGAGAGCTTTTCTCTAGTAGAGCATTTGGGTaGTTTCTACTTTCGGGTTAT +
Preference number: 3 (lower is better)
Translates to: YELCGSANHRAQKGELFSSRAFG*FLLSGY
Trigger: ATAACCCGAAAGTAGAAACAACCCAAATGCTCTACT...AGAGAAAAGCTCTCCCTTCTGTGCCCTGTGATTTGCTGATCCACAGAGTTCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR TCA 72 bp AACTCAGCCTTGGCCATCATCTTGATTTCAGCCTTTTaGGATCTTGAGCAGAAAACCTTCTTTGCCTGGATT +
Preference number: 3 (lower is better)
Translates to: NSALAIILISAF*DLEQKTFFAWI
Trigger: AATCCAGGCAAAGAAGGTTTTCTGCTCAAGATCTCAAAAGGCTGAAATCAAGATGATGGCCAAGGCTGAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR GCA 72 bp GGATTAAAATCAAAGCACAATGAACTATCATTTGGCTaGCCCAGGCCCACTAAATCCAGACAGCAAAGTGTT +
Preference number: 3 (lower is better)
Translates to: GLKSKHNELSFG*PRPTKSRQQSV
Trigger: AACACTTTGCTGTCTGGATTTAGTGGGCCTGGGGCAGCCAAATGATAGTTCATTGTGCTTTGATTTTAATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR CCA 72 bp GCTATTAAGGTAAGCCTGGCTGGAGCTAGAATGCCTTaGTTCAAATCTGAGCTTTGTCACTTTCTAGTTCTA +
Preference number: 3 (lower is better)
Translates to: AIKVSLAGARMP*FKSELCHFLVL
Trigger: TAGAACTAGAAAGTGACAAAGCTCAGATTTGAACCAAGGCATTCTAGCTCCAGCCAGGCTTACCTTAATAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR-3UTR CAA 90 bp GTAGAATTTCTGGGTCATATGATAACCCTATGTTTGATTTTTGTGAAACTGCTGGACGAAGTTTCACTCTaGTCACCCAGGCTGGATGGA +
Preference number: 3 (lower is better)
Translates to: VEFLGHMITLCLIFVKLLDEVSL*SPRLDG
Trigger: TCCATCCAGCCTGGGTGACAAGAGTGAAACTTCGTC...CAGCAGTTTCACAAAAATCAAACATAGGGTTATCATATGACCCAGAAATTCTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR-3UTR CAA 90 bp TATGAACTCTGTGGATCAGCAAATCACAGGGCACAGAAGGGAGAGCTTTTCTCTTTCCCTGCCTCTCATTaGAAGACTGATTCAATTAAT +
Preference number: 3 (lower is better)
Translates to: YELCGSANHRAQKGELFSFPASH*KTDSIN
Trigger: ATTAATTGAATCAGTCTTCAAATGAGAGGCAGGGAA...AGAGAAAAGCTCTCCCTTCTGTGCCCTGTGATTTGCTGATCCACAGAGTTCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR-3UTR CAA 90 bp TATGAACTCTGTGGATCAGCAAATCACAGGGCACAGAAGGGAGAGCTTTTCTCTAAGGTGCTTAATACATaGCTATCAAATGCCTTTTGG +
Preference number: 3 (lower is better)
Translates to: YELCGSANHRAQKGELFSKVLNT*LSNAFW
Trigger: CCAAAAGGCATTTGATAGCAATGTATTAAGCACCTT...AGAGAAAAGCTCTCCCTTCTGTGCCCTGTGATTTGCTGATCCACAGAGTTCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR-3UTR CAA 90 bp TCATTTTCCTATCCATGGTGTAGAAATACATCTTCTGCCTTTTGCCTGGCAGGCAATTTCTCCAAATCCTaGGCAGCATGTATTTTCTGG +
Preference number: 3 (lower is better)
Translates to: SFSYPWCRNTSSAFCLAGNFSKS*AACIFW
Trigger: CCAGAAAATACATGCTGCCAAGGATTTGGAGAAATT...GCCTGCCAGGCAAAAGGCAGAAGATGTATTTCTACACCATGGATAGGAAAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR-3UTR CAA 90 bp GTAGAATTTCTGGGTCATATGATAACCCTATGTTTGATTTTTGTGAAACTGCTGTGTGATTCCAGCACTTaGGAAGGCCAAGATAGGAGG +
Preference number: 3 (lower is better)
Translates to: VEFLGHMITLCLIFVKLLCDSST*EGQDRR
Trigger: CCTCCTATCTTGGCCTTCCAAAGTGCTGGAATCACA...CAGCAGTTTCACAAAAATCAAACATAGGGTTATCATATGACCCAGAAATTCTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR TCA 72 bp TCAAGGTTCTGGAGGCTTGTGGAGTGCAAATTGTCATaGAGCCAATTTAATATAACTGCTTCCTTTATGCTG +
Preference number: 3 (lower is better)
Translates to: SRFWRLVECKLS*SQFNITASFML
Trigger: CAGCATAAAGGAAGCAGTTATATTAAATTGGCTTCATGACAATTTGCACTCCACAAGCCTCCAGAACCTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR TCA 72 bp TGTCTCAGCCTGGCTCTGAATGAGTACACAGCAGCCTaGACCTATGAAAGATATAACATTTCTAAACTTTTG +
Preference number: 3 (lower is better)
Translates to: CLSLALNEYTAA*TYERYNISKLL
Trigger: CAAAAGTTTAGAAATGTTATATCTTTCATAGGTTCAGGCTGCTGTGTACTCATTCAGAGCCAGGCTGAGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR-3UTR CAA 90 bp GTAGAATTTCTGGGTCATATGATAACCCTATGTTTGATTTTTGTGAAACTGCTGCCTAACAAAAGAATGTaGAAGGCGGACAAGATTTGG +
Preference number: 3 (lower is better)
Translates to: VEFLGHMITLCLIFVKLLPNKRM*KADKIW
Trigger: CCAAATCTTGTCCGCCTTCAACATTCTTTTGTTAGG...CAGCAGTTTCACAAAAATCAAACATAGGGTTATCATATGACCCAGAAATTCTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR GCA 72 bp ATTATTCCTTCCACAGGTGTTTCTAAGAACAAGGACTaGAATTCGATGGTATATAACTCAGCACTAACCTTT +
Preference number: 3 (lower is better)
Translates to: IIPSTGVSKNKD*NSMVYNSALTF
Trigger: AAAGGTTAGTGCTGAGTTATATACCATCGAATTGCAGTCCTTGTTCTTAGAAACACCTGTGGAAGGAATAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR CCA 72 bp ATGACATGTCATTCCTCTGATTATGTTACATTAACATaGCAAAAGGGACGTAATTATGATCCTAATCAGTTG +
Preference number: 3 (lower is better)
Translates to: MTCHSSDYVTLT*QKGRNYDPNQL
Trigger: CAACTGATTAGGATCATAATTACGTCCCTTTTGCCATGTTAATGTAACATAATCAGAGGAATGACATGTCAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR CCA 72 bp AAATACATGTTTTTAATTCTCCAGGGTATACACCTATaGGTAGAATTTCTGGGTCATATGATAACCCTATGT +
Preference number: 3 (lower is better)
Translates to: KYMFLILQGIHL*VEFLGHMITLC
Trigger: ACATAGGGTTATCATATGACCCAGAAATTCTACCCATAGGTGTATACCCTGGAGAATTAAAAACATGTATTT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR TCA 90 bp AGCCTCTGCAGCAGGATTACCTGTGGGGGCCCAGGGAAGCTGCCCCACAGCACACAGCCTGGCTCTGAATaGGTACACAGCAGCCTGAAC +
Preference number: 4 (lower is better)
Translates to: SLCSRITCGGPGKLPHSTQPGSE*VHSSLN
Trigger: GTTCAGGCTGCTGTGTACTCATTCAGAGCCAGGCTG...TGTGCTGTGGGGCAGCTTCCCTGGGCCCCCACAGGTAATCCTGCTGCAGAGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR TCA 90 bp AGCCTCTGCAGCAGGATTACCTGTGGGGGCCCAGGGAAGCTGCCCCACAGCACAGGCACAAGAATCGCTTaGAGCCAGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: SLCSRITCGGPGKLPHSTGTRIA*SQEAEV
Trigger: AACCTCTGCCTCCTGGCTTCAAGCGATTCTTGTGCC...TGTGCTGTGGGGCAGCTTCCCTGGGCCCCCACAGGTAATCCTGCTGCAGAGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR TCA 90 bp AGCCTCTGCAGCAGGATTACCTGTGGGGGCCCAGGGAAGCTGCCCCACAGCACAGCCCGGCCAACATGGTaGAACCCCATCTCTGCTAAA +
Preference number: 4 (lower is better)
Translates to: SLCSRITCGGPGKLPHSTARPTW*NPISAK
Trigger: TTTAGCAGAGATGGGGTTTCACCATGTTGGCCGGGC...TGTGCTGTGGGGCAGCTTCCCTGGGCCCCCACAGGTAATCCTGCTGCAGAGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR TCA 90 bp AGCCTCTGCAGCAGGATTACCTGTGGGGGCCCAGGGAAGCTGCCCCACAGCACACTGCTTCCTTTATGCTaGAAGGATTCACTGGGGACA +
Preference number: 4 (lower is better)
Translates to: SLCSRITCGGPGKLPHSTLLPLC*KDSLGT
Trigger: TGTCCCCAGTGAATCCTTTCAGCATAAAGGAAGCAG...TGTGCTGTGGGGCAGCTTCCCTGGGCCCCCACAGGTAATCCTGCTGCAGAGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR TCA 90 bp AGCCTCTGCAGCAGGATTACCTGTGGGGGCCCAGGGAAGCTGCCCCACAGCACATTGAGACCAGGAGTTTaGGACCAGTCTGGACAACAT +
Preference number: 4 (lower is better)
Translates to: SLCSRITCGGPGKLPHSTLRPGV*DQSGQH
Trigger: ATGTTGTCCAGACTGGTCTCAAACTCCTGGTCTCAA...TGTGCTGTGGGGCAGCTTCCCTGGGCCCCCACAGGTAATCCTGCTGCAGAGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR CCA 90 bp AGCCTCTGCAGCAGGATTACCTGTGGGGGCCCAGGGAAGCTGCCCCACAGCACACAACCTCCACCTCCCTaGTTCAAGCAATTATTTGCC +
Preference number: 4 (lower is better)
Translates to: SLCSRITCGGPGKLPHSTQPPPP*FKQLFA
Trigger: GGCAAATAATTGCTTGAACCAGGGAGGTGGAGGTTG...TGTGCTGTGGGGCAGCTTCCCTGGGCCCCCACAGGTAATCCTGCTGCAGAGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR CCA 90 bp AGCCTCTGCAGCAGGATTACCTGTGGGGGCCCAGGGAAGCTGCCCCACAGCACACCTTCTCACTGCCCCTaGAAACCACTAAGCTACTTT +
Preference number: 4 (lower is better)
Translates to: SLCSRITCGGPGKLPHSTPSHCP*KPLSYF
Trigger: AAAGTAGCTTAGTGGTTTCCAGGGGCAGTGAGAAGG...TGTGCTGTGGGGCAGCTTCCCTGGGCCCCCACAGGTAATCCTGCTGCAGAGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR TCA 90 bp AGGAGCTCCTGGGCCAGGCACTGCACTAACTATTGTACTTCTATTCCAGTAGACGAGGGCCAGGACTGCTaGACCTCCCGGCTTCTTGGA +
Preference number: 4 (lower is better)
Translates to: RSSWARHCTNYCTSIPVDEGQDC*TSRLLG
Trigger: TCCAAGAAGCCGGGAGGTTCAGCAGTCCTGGCCCTC...GTCTACTGGAATAGAAGTACAATAGTTAGTGCAGTGCCTGGCCCAGGAGCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR TCA 90 bp AGCCTCTGCAGCAGGATTACCTGTGGGGGCCCAGGGAAGCTGCCCCACAGCACACAATTCTCTCTGGTCTaGTCTTTGTTAAGCTCTGAC +
Preference number: 4 (lower is better)
Translates to: SLCSRITCGGPGKLPHSTQFSLV*SLLSSD
Trigger: GTCAGAGCTTAACAAAGATCAGACCAGAGAGAATTG...TGTGCTGTGGGGCAGCTTCCCTGGGCCCCCACAGGTAATCCTGCTGCAGAGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR GCA 90 bp AGCCTCTGCAGCAGGATTACCTGTGGGGGCCCAGGGAAGCTGCCCCACAGCACACAAGGAACTGAATTCTaGCAACAACCATCTGAAGGT +
Preference number: 4 (lower is better)
Translates to: SLCSRITCGGPGKLPHSTQGTEF*QQPSEG
Trigger: ACCTTCAGATGGTTGTTGGCAGAATTCAGTTCCTTG...TGTGCTGTGGGGCAGCTTCCCTGGGCCCCCACAGGTAATCCTGCTGCAGAGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR CCA 90 bp GGCTGGAATAATCTGGAGACTTCTCCTCTTGCATGTCTAGTGCCTCCAGTGAGACAGCAGGATTACCTGTaGGGGCCCAGGGAAGCTGCC +
Preference number: 4 (lower is better)
Translates to: GWNNLETSPLACLVPPVRQQDYL*GPREAA
Trigger: GGCAGCTTCCCTGGGCCCCCACAGGTAATCCTGCTG...TCTCACTGGAGGCACTAGACATGCAAGAGGAGAAGTCTCCAGATTATTCCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR GCA 90 bp AGGAGCTCCTGGGCCAGGCACTGCACTAACTATTGTACTTCTATTCCAGTAGACCCGAGATCGCGCCACTaGACTTCAGCCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: RSSWARHCTNYCTSIPVDPRSRH*TSAWAT
Trigger: TGTTGCCCAGGCTGAAGTGCAGTGGCGCGATCTCGG...GTCTACTGGAATAGAAGTACAATAGTTAGTGCAGTGCCTGGCCCAGGAGCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR CCA 90 bp GGCTGGAATAATCTGGAGACTTCTCCTCTTGCATGTCTAGTGCCTCCAGTGAGAGCCTCAGGATCTCAGTaGTATGCCCACCGGACCCAG +
Preference number: 4 (lower is better)
Translates to: GWNNLETSPLACLVPPVRASGSQ*YAHRTQ
Trigger: CTGGGTCCGGTGGGCATACCACTGAGATCCTGAGGC...TCTCACTGGAGGCACTAGACATGCAAGAGGAGAAGTCTCCAGATTATTCCAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR CCA 90 bp AGCCTCTGCAGCAGGATTACCTGTGGGGGCCCAGGGAAGCTGCCCCACAGCACAAAAAGGGATAGAGTTTaGGAGATGTGGATTTCCCAT +
Preference number: 4 (lower is better)
Translates to: SLCSRITCGGPGKLPHSTKRDRV*EMWISH
Trigger: ATGGGAAATCCACATCTCCCAAACTCTATCCCTTTT...TGTGCTGTGGGGCAGCTTCCCTGGGCCCCCACAGGTAATCCTGCTGCAGAGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR TCA 90 bp AGGAGCTCCTGGGCCAGGCACTGCACTAACTATTGTACTTCTATTCCAGTAGACGTGCAGAACTCTGTGTaGCTGCACAGGCCACACACC +
Preference number: 4 (lower is better)
Translates to: RSSWARHCTNYCTSIPVDVQNSV*LHRPHT
Trigger: GGTGTGTGGCCTGTGCAGTCACACAGAGTTCTGCAC...GTCTACTGGAATAGAAGTACAATAGTTAGTGCAGTGCCTGGCCCAGGAGCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR TCA 90 bp GGCTGGAATAATCTGGAGACTTCTCCTCTTGCATGTCTAGTGCCTCCAGTGAGAGGGCAGATCACGAGGTaGGGAGATGGAGACCATCCT +
Preference number: 4 (lower is better)
Translates to: GWNNLETSPLACLVPPVRGQITR*GDGDHP
Trigger: AGGATGGTCTCCATCTCCTCACCTCGTGATCTGCCC...TCTCACTGGAGGCACTAGACATGCAAGAGGAGAAGTCTCCAGATTATTCCAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR CAA 72 bp AATGTTGAAGGCGGACAAGATTTGGGTGTCTGCTCATaGTGCGCCAGGGCTGAAGTCATGGGAAGAAACCCC +
Preference number: 4 (lower is better)
Translates to: NVEGGQDLGVCS*CARAEVMGRNP
Trigger: GGGGTTTCTTCCCATGACTTCAGCCCTGGCGCACAATGAGCAGACACCCAAATCTTGTCCGCCTTCAACATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR TCA 90 bp TATGAACTCTGTGGATCAGCAAATCACAGGGCACAGAAGGGAGAGCTTTTCTCTTGGAGTGCAAGGTGGTaGAAACGGTGGAGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: YELCGSANHRAQKGELFSWSARW*KRWRAR
Trigger: CCTGGCCCTCCACCGTTTTCACCACCTTGCACTCCA...AGAGAAAAGCTCTCCCTTCTGTGCCCTGTGATTTGCTGATCCACAGAGTTCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR TCA 90 bp TCATTTTCCTATCCATGGTGTAGAAATACATCTTCTGCCTTTTGCCTGGCAGGCGGTGGGCGGATCACTTaGGCCCAGGAGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: SFSYPWCRNTSSAFCLAGGGRIT*AQEFET
Trigger: GGTCTCGAACTCCTGGGCTCAAGTGATCCGCCCACC...GCCTGCCAGGCAAAAGGCAGAAGATGTATTTCTACACCATGGATAGGAAAATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR GCA 90 bp AGCCTCTGCAGCAGGATTACCTGTGGGGGCCCAGGGAAGCTGCCCCACAGCACATCTAAAGAAGTCAGTTaGCATTTGTCAAACAATTCG +
Preference number: 4 (lower is better)
Translates to: SLCSRITCGGPGKLPHSTSKEVS*HLSNNS
Trigger: CGAATTGTTTGACAAATGGCAACTGACTTCTTTAGA...TGTGCTGTGGGGCAGCTTCCCTGGGCCCCCACAGGTAATCCTGCTGCAGAGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR CCA 90 bp AGGAGCTCCTGGGCCAGGCACTGCACTAACTATTGTACTTCTATTCCAGTAGACGTAATTCCAGCACTTTaGGAAGCCGAGGTGGGCGGA +
Preference number: 4 (lower is better)
Translates to: RSSWARHCTNYCTSIPVDVIPAL*EAEVGG
Trigger: TCCGCCCACCTCGGCTTCCCAAAGTGCTGGAATTAC...GTCTACTGGAATAGAAGTACAATAGTTAGTGCAGTGCCTGGCCCAGGAGCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR CCA 90 bp AGGAGCTCCTGGGCCAGGCACTGCACTAACTATTGTACTTCTATTCCAGTAGACTGTCTGAGCCTCAGCTaGGAAGACCAGAAAGCCTGG +
Preference number: 4 (lower is better)
Translates to: RSSWARHCTNYCTSIPVDCLSLS*EDQKAW
Trigger: CCAGGCTTTCTGGTCTTCCCAGCTGAGGCTCAGACA...GTCTACTGGAATAGAAGTACAATAGTTAGTGCAGTGCCTGGCCCAGGAGCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR TCA 90 bp CTACCACTGATGGAGACAAATGTGACTGAGGGCTTGAGGGCTTACTATTTAGCACCAGAAAGCCTGGAGTaGCTCAAATGGCAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: LPLMETNVTEGLRAYYLAPESLE*LKWQGW
Trigger: CCAGCCCTGCCATTTGAGTCACTCCAGGCTTTCTGG...TGCTAAATAGTAAGCCCTCAAGCCCTCAGTCACATTTGTCTCCATCAGTGGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR TCA 90 bp TATGAACTCTGTGGATCAGCAAATCACAGGGCACAGAAGGGAGAGCTTTTCTCTCTCTTCCAAGGTGTCTaGGCCTCAGCTGGGAAGACC +
Preference number: 4 (lower is better)
Translates to: YELCGSANHRAQKGELFSLFQGV*ASAGKT
Trigger: GGTCTTCCCAGCTGAGGCTCAGACACCTTGGAAGAG...AGAGAAAAGCTCTCCCTTCTGTGCCCTGTGATTTGCTGATCCACAGAGTTCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR GCA 90 bp TATGAACTCTGTGGATCAGCAAATCACAGGGCACAGAAGGGAGAGCTTTTCTCTAGGATCTCAGTGGTATaGCCACCGGACCCAGCCACT +
Preference number: 4 (lower is better)
Translates to: YELCGSANHRAQKGELFSRISVV*PPDPAT
Trigger: AGTGGCTGGGTCCGGTGGGCATACCACTGAGATCCT...AGAGAAAAGCTCTCCCTTCTGTGCCCTGTGATTTGCTGATCCACAGAGTTCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR GCA 90 bp TCTCACCATTCTGAGACACCTTCGGCTACACATTTCTCCAGCCAAAAACCTAGGGGTGTCTGCTCATTGTaGGCCAGGGCTGAAGTCATG +
Preference number: 4 (lower is better)
Translates to: SHHSETPSATHFSSQKPRGVCSL*ARAEVM
Trigger: CATGACTTCAGCCCTGGCGCACAATGAGCAGACACC...CCTAGGTTTTTGGCTGGAGAAATGTGTAGCCGAAGGTGTCTCAGAATGGTGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR TCA 90 bp CTACCACTGATGGAGACAAATGTGACTGAGGGCTTGAGGGCTTACTATTTAGCAGTCTCAGCCTGGCTCTaGATGAGTACACAGCAGCCT +
Preference number: 4 (lower is better)
Translates to: LPLMETNVTEGLRAYYLAVSAWL*MSTQQP
Trigger: AGGCTGCTGTGTACTCATTCAGAGCCAGGCTGAGAC...TGCTAAATAGTAAGCCCTCAAGCCCTCAGTCACATTTGTCTCCATCAGTGGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR TCA 90 bp CTACCACTGATGGAGACAAATGTGACTGAGGGCTTGAGGGCTTACTATTTAGCAGAACTCCTGACCTTGTaGTACACCCACCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: LPLMETNVTEGLRAYYLAELLTL*YTHLGL
Trigger: GAGGCCAAGGTGGGTGTATCACAAGGTCAGGAGTTC...TGCTAAATAGTAAGCCCTCAAGCCCTCAGTCACATTTGTCTCCATCAGTGGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR GCA 90 bp TCATTTTCCTATCCATGGTGTAGAAATACATCTTCTGCCTTTTGCCTGGCAGGCTCACCCAGGCTGGAGTaGAGTGCCATGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: SFSYPWCRNTSSAFCLAGSPRLE*SAMISA
Trigger: AGCCGAGATCATGGCACTGCACTCCAGCCTGGGTGA...GCCTGCCAGGCAAAAGGCAGAAGATGTATTTCTACACCATGGATAGGAAAATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR GCA 90 bp GGCTGGAATAATCTGGAGACTTCTCCTCTTGCATGTCTAGTGCCTCCAGTGAGAATTTCCCCTTCTCACTaGCCCTGGAAACCACTAAGC +
Preference number: 4 (lower is better)
Translates to: GWNNLETSPLACLVPPVRISPSH*PWKPLS
Trigger: GCTTAGTGGTTTCCAGGGGCAGTGAGAAGGGGAAAT...TCTCACTGGAGGCACTAGACATGCAAGAGGAGAAGTCTCCAGATTATTCCAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR CCA 90 bp TCTCACCATTCTGAGACACCTTCGGCTACACATTTCTCCAGCCAAAAACCTAGGGTCACCCAGGCTGGATaGAGTGCAATGGTGCAATCT +
Preference number: 4 (lower is better)
Translates to: SHHSETPSATHFSSQKPRVTQAG*SAMVQS
Trigger: AGATTGCACCATTGCACTCCATCCAGCCTGGGTGAC...CCTAGGTTTTTGGCTGGAGAAATGTGTAGCCGAAGGTGTCTCAGAATGGTGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR CCA 90 bp GGCTGGAATAATCTGGAGACTTCTCCTCTTGCATGTCTAGTGCCTCCAGTGAGATGTGGGCAGGATGTGTaGTTTCCCTGCCTCTCATTT +
Preference number: 4 (lower is better)
Translates to: GWNNLETSPLACLVPPVRCGQDV*FPCLSF
Trigger: AAATGAGAGGCAGGGAAACCACACATCCTGCCCACA...TCTCACTGGAGGCACTAGACATGCAAGAGGAGAAGTCTCCAGATTATTCCAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR CCA 90 bp TCTCACCATTCTGAGACACCTTCGGCTACACATTTCTCCAGCCAAAAACCTAGGCAAGGGCCGGACGTGTaGCTTACACCTGTAATTCCA +
Preference number: 4 (lower is better)
Translates to: SHHSETPSATHFSSQKPRQGPDV*LTPVIP
Trigger: TGGAATTACAGGTGTAAGCCACACGTCCGGCCCTTG...CCTAGGTTTTTGGCTGGAGAAATGTGTAGCCGAAGGTGTCTCAGAATGGTGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR GCA 90 bp CTACCACTGATGGAGACAAATGTGACTGAGGGCTTGAGGGCTTACTATTTAGCAGAGAGCCACATGGAGTaGAAGGTGGTGAAAACGGTG +
Preference number: 4 (lower is better)
Translates to: LPLMETNVTEGLRAYYLAESHME*KVVKTV
Trigger: CACCGTTTTCACCACCTTGCACTCCATGTGGCTCTC...TGCTAAATAGTAAGCCCTCAAGCCCTCAGTCACATTTGTCTCCATCAGTGGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR GCA 90 bp TCTCACCATTCTGAGACACCTTCGGCTACACATTTCTCCAGCCAAAAACCTAGGGGAGACTTCTCCTCTTaGATGTCTAGTGCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: SHHSETPSATHFSSQKPRGDFSS*MSSASS
Trigger: ACTGGAGGCACTAGACATGCAAGAGGAGAAGTCTCC...CCTAGGTTTTTGGCTGGAGAAATGTGTAGCCGAAGGTGTCTCAGAATGGTGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR GCA 90 bp AGGAGCTCCTGGGCCAGGCACTGCACTAACTATTGTACTTCTATTCCAGTAGACTTTTTCACTGCTGCATaGAGGCCAAGGAGAAAGGAG +
Preference number: 4 (lower is better)
Translates to: RSSWARHCTNYCTSIPVDFFTAA*RPRRKE
Trigger: CTCCTTTCTCCTTGGCCTGCATGCAGCAGTGAAAAA...GTCTACTGGAATAGAAGTACAATAGTTAGTGCAGTGCCTGGCCCAGGAGCTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR GCA 90 bp GGCTGGAATAATCTGGAGACTTCTCCTCTTGCATGTCTAGTGCCTCCAGTGAGATGGTTTCTTTTTCACTaGTGCATGCAGGCCAAGGAG +
Preference number: 4 (lower is better)
Translates to: GWNNLETSPLACLVPPVRWFLFH*CMQAKE
Trigger: CTCCTTGGCCTGCATGCAGCAGTGAAAAAGAAACCA...TCTCACTGGAGGCACTAGACATGCAAGAGGAGAAGTCTCCAGATTATTCCAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR CCA 90 bp TCTCACCATTCTGAGACACCTTCGGCTACACATTTCTCCAGCCAAAAACCTAGGGTAATTCCAGCACTTTaGGAGGCCAAGATGGGTGGA +
Preference number: 4 (lower is better)
Translates to: SHHSETPSATHFSSQKPRVIPAL*EAKMGG
Trigger: TCCACCCATCTTGGCCTCCCAAAGTGCTGGAATTAC...CCTAGGTTTTTGGCTGGAGAAATGTGTAGCCGAAGGTGTCTCAGAATGGTGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR CCA 90 bp TCTCACCATTCTGAGACACCTTCGGCTACACATTTCTCCAGCCAAAAACCTAGGCTGATCTCAAACTCCTaGGCTCAGGTGATCCATCCA +
Preference number: 4 (lower is better)
Translates to: SHHSETPSATHFSSQKPRLISNS*AQVIHP
Trigger: TGGATGGATCACCTGAGCCCAGGAGTTTGAGATCAG...CCTAGGTTTTTGGCTGGAGAAATGTGTAGCCGAAGGTGTCTCAGAATGGTGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR CAA 72 bp GAGCTACCACTGATGGAGACAAATGTGACTGAGGGCTaGAGGGCTTACTATTTAGCAGGCTCTGTGCTAAAC +
Preference number: 4 (lower is better)
Translates to: ELPLMETNVTEG*RAYYLAGSVLN
Trigger: GTTTAGCACAGAGCCTGCTAAATAGTAAGCCCTCAAGCCCTCAGTCACATTTGTCTCCATCAGTGGTAGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR TCA 90 bp TCATTTTCCTATCCATGGTGTAGAAATACATCTTCTGCCTTTTGCCTGGCAGGCTCTGGCTTCACCCTGTaGATTAGGGGAAAGGAGAGC +
Preference number: 4 (lower is better)
Translates to: SFSYPWCRNTSSAFCLAGSGFTL*IRGKES
Trigger: GCTCTCCTTTCCCCTAATTCACAGGGTGAAGCCAGA...GCCTGCCAGGCAAAAGGCAGAAGATGTATTTCTACACCATGGATAGGAAAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR TCA 90 bp TCATTTTCCTATCCATGGTGTAGAAATACATCTTCTGCCTTTTGCCTGGCAGGCAGGAAGATGTCCGGCTaGCAGATGCGCCTGTTACAT +
Preference number: 4 (lower is better)
Translates to: SFSYPWCRNTSSAFCLAGRKMSG*QMRLLH
Trigger: ATGTAACAGGCGCATCTGTCAGCCGGACATCTTCCT...GCCTGCCAGGCAAAAGGCAGAAGATGTATTTCTACACCATGGATAGGAAAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR TCA 90 bp TATGAACTCTGTGGATCAGCAAATCACAGGGCACAGAAGGGAGAGCTTTTCTCTGTGTTCTCACCATTCTaGGACACCTTCGGCTACACA +
Preference number: 4 (lower is better)
Translates to: YELCGSANHRAQKGELFSVFSPF*DTFGYT
Trigger: TGTGTAGCCGAAGGTGTCTCAGAATGGTGAGAACAC...AGAGAAAAGCTCTCCCTTCTGTGCCCTGTGATTTGCTGATCCACAGAGTTCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR TCA 90 bp TCTCACCATTCTGAGACACCTTCGGCTACACATTTCTCCAGCCAAAAACCTAGGATCTTTGTTAAGCTCTaGCCTGACAGAAGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: SHHSETPSATHFSSQKPRIFVKL*PDRSLC
Trigger: GCAGAGGCTTCTGTCAGGTCAGAGCTTAACAAAGAT...CCTAGGTTTTTGGCTGGAGAAATGTGTAGCCGAAGGTGTCTCAGAATGGTGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR TCA 90 bp GGCTGGAATAATCTGGAGACTTCTCCTCTTGCATGTCTAGTGCCTCCAGTGAGAGGCGCACTATCTTTCTaGATGTCACAGAAATGCACA +
Preference number: 4 (lower is better)
Translates to: GWNNLETSPLACLVPPVRGALSF*MSQKCT
Trigger: TGTGCATTTCTGTGACATTCAGAAAGATAGTGCGCC...TCTCACTGGAGGCACTAGACATGCAAGAGGAGAAGTCTCCAGATTATTCCAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR TCA 90 bp TCTCACCATTCTGAGACACCTTCGGCTACACATTTCTCCAGCCAAAAACCTAGGTCATCTTCTTCAGTTTaGGTTGGGACTGGCGCACTA +
Preference number: 4 (lower is better)
Translates to: SHHSETPSATHFSSQKPRSSSSV*VGTGAL
Trigger: TAGTGCGCCAGTCCCAACTCAAACTGAAGAAGATGA...CCTAGGTTTTTGGCTGGAGAAATGTGTAGCCGAAGGTGTCTCAGAATGGTGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR TCA 90 bp AGGAGCTCCTGGGCCAGGCACTGCACTAACTATTGTACTTCTATTCCAGTAGACTATACAGAACTAGCATaGGGGGAAGTCTCTGAAGAC +
Preference number: 4 (lower is better)
Translates to: RSSWARHCTNYCTSIPVDYTELA*GEVSED
Trigger: GTCTTCAGAGACTTCCCCTCATGCTAGTTCTGTATA...GTCTACTGGAATAGAAGTACAATAGTTAGTGCAGTGCCTGGCCCAGGAGCTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR TCA 90 bp AGGAGCTCCTGGGCCAGGCACTGCACTAACTATTGTACTTCTATTCCAGTAGACACAACTGCAAGGAACTaGATTCTGCCAACAACCATC +
Preference number: 4 (lower is better)
Translates to: RSSWARHCTNYCTSIPVDTTARN*ILPTTI
Trigger: GATGGTTGTTGGCAGAATTCAGTTCCTTGCAGTTGT...GTCTACTGGAATAGAAGTACAATAGTTAGTGCAGTGCCTGGCCCAGGAGCTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR GCA 90 bp TCATTTTCCTATCCATGGTGTAGAAATACATCTTCTGCCTTTTGCCTGGCAGGCCAAGATTTGGGTGTCTaGTCATTGTGCGCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: SFSYPWCRNTSSAFCLAGQDLGV*SLCARA
Trigger: AGCCCTGGCGCACAATGAGCAGACACCCAAATCTTG...GCCTGCCAGGCAAAAGGCAGAAGATGTATTTCTACACCATGGATAGGAAAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR CCA 90 bp AGGAGCTCCTGGGCCAGGCACTGCACTAACTATTGTACTTCTATTCCAGTAGACAACCTCCCGGCTTCTTaGAATTCGGTGAATGTAGTA +
Preference number: 4 (lower is better)
Translates to: RSSWARHCTNYCTSIPVDNLPAS*NSVNVV
Trigger: TACTACATTCACCGAATTCCAAGAAGCCGGGAGGTT...GTCTACTGGAATAGAAGTACAATAGTTAGTGCAGTGCCTGGCCCAGGAGCTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR CCA 90 bp TCATTTTCCTATCCATGGTGTAGAAATACATCTTCTGCCTTTTGCCTGGCAGGCCTGGATGGAGTGCAATaGTGCAATCTCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: SFSYPWCRNTSSAFCLAGLDGVQ*CNLGSL
Trigger: CAGTGAGCCGAGATTGCACCATTGCACTCCATCCAG...GCCTGCCAGGCAAAAGGCAGAAGATGTATTTCTACACCATGGATAGGAAAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR CCA 90 bp TCATTTTCCTATCCATGGTGTAGAAATACATCTTCTGCCTTTTGCCTGGCAGGCTTTTTGAGGAGCTCCTaGGCCAGGCACTGCACTAAC +
Preference number: 4 (lower is better)
Translates to: SFSYPWCRNTSSAFCLAGFLRSS*ARHCTN
Trigger: GTTAGTGCAGTGCCTGGCCCAGGAGCTCCTCAAAAA...GCCTGCCAGGCAAAAGGCAGAAGATGTATTTCTACACCATGGATAGGAAAATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR CCA 90 bp TCTCACCATTCTGAGACACCTTCGGCTACACATTTCTCCAGCCAAAAACCTAGGGCAGTTCTTAAAATGTaGTCCAAGGTCCTGGGGAGT +
Preference number: 4 (lower is better)
Translates to: SHHSETPSATHFSSQKPRAVLKM*SKVLGS
Trigger: ACTCCCCAGGACCTTGGACCACATTTTAAGAACTGC...CCTAGGTTTTTGGCTGGAGAAATGTGTAGCCGAAGGTGTCTCAGAATGGTGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR CCA 90 bp TATGAACTCTGTGGATCAGCAAATCACAGGGCACAGAAGGGAGAGCTTTTCTCTCTAGCTGATTGTGGTTaGCAGAAGTCTCAGATGGCC +
Preference number: 4 (lower is better)
Translates to: YELCGSANHRAQKGELFSLADCG*QKSQMA
Trigger: GGCCATCTGAGACTTCTGCCAACCACAATCAGCTAG...AGAGAAAAGCTCTCCCTTCTGTGCCCTGTGATTTGCTGATCCACAGAGTTCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR TCA 90 bp GGCTGGAATAATCTGGAGACTTCTCCTCTTGCATGTCTAGTGCCTCCAGTGAGAGATGCGCCTGTTACATaGTTCAGAGAAGACAGTTTT +
Preference number: 4 (lower is better)
Translates to: GWNNLETSPLACLVPPVRDAPVT*FREDSF
Trigger: AAAACTGTCTTCTCTGAATCATGTAACAGGCGCATC...TCTCACTGGAGGCACTAGACATGCAAGAGGAGAAGTCTCCAGATTATTCCAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR TCA 90 bp TCATTTTCCTATCCATGGTGTAGAAATACATCTTCTGCCTTTTGCCTGGCAGGCCACCACTCCTCTTGTTaGCACGGTTTCATAGCACTC +
Preference number: 4 (lower is better)
Translates to: SFSYPWCRNTSSAFCLAGHHSSC*HGFIAL
Trigger: GAGTGCTATGAAACCGTGTCAACAAGAGGAGTGGTG...GCCTGCCAGGCAAAAGGCAGAAGATGTATTTCTACACCATGGATAGGAAAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR TCA 90 bp AGGAGCTCCTGGGCCAGGCACTGCACTAACTATTGTACTTCTATTCCAGTAGACGCCTTGGTTCAAATCTaGGCTTTGTCACTTTCTAGT +
Preference number: 4 (lower is better)
Translates to: RSSWARHCTNYCTSIPVDALVQI*ALSLSS
Trigger: ACTAGAAAGTGACAAAGCTCAGATTTGAACCAAGGC...GTCTACTGGAATAGAAGTACAATAGTTAGTGCAGTGCCTGGCCCAGGAGCTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR TCA 90 bp GTAGAATTTCTGGGTCATATGATAACCCTATGTTTGATTTTTGTGAAACTGCTGACTCCTGGGCTCAGGTaGTCCATCCACCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: VEFLGHMITLCLIFVKLLTPGLR*SIHLGL
Trigger: GAGGCCGAGGTGGATGGATCACCTGAGCCCAGGAGT...CAGCAGTTTCACAAAAATCAAACATAGGGTTATCATATGACCCAGAAATTCTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR GCA 90 bp TCATTTTCCTATCCATGGTGTAGAAATACATCTTCTGCCTTTTGCCTGGCAGGCTGTCCGGCTGACAGATaGGCCTGTTACATGATTCAG +
Preference number: 4 (lower is better)
Translates to: SFSYPWCRNTSSAFCLAGCPADR*ACYMIQ
Trigger: CTGAATCATGTAACAGGCGCATCTGTCAGCCGGACA...GCCTGCCAGGCAAAAGGCAGAAGATGTATTTCTACACCATGGATAGGAAAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR GCA 90 bp CTACCACTGATGGAGACAAATGTGACTGAGGGCTTGAGGGCTTACTATTTAGCAATACCCATTAGGAGTTaGCCTCCATTTCCCCTTCTC +
Preference number: 4 (lower is better)
Translates to: LPLMETNVTEGLRAYYLAIPIRS*PPFPLL
Trigger: GAGAAGGGGAAATGGAGGGCAACTCCTAATGGGTAT...TGCTAAATAGTAAGCCCTCAAGCCCTCAGTCACATTTGTCTCCATCAGTGGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR GCA 90 bp GGCTGGAATAATCTGGAGACTTCTCCTCTTGCATGTCTAGTGCCTCCAGTGAGATTTCTTTTTCACTGCTaGATGCAGGCCAAGGAGAAA +
Preference number: 4 (lower is better)
Translates to: GWNNLETSPLACLVPPVRFLFHC*MQAKEK
Trigger: TTTCTCCTTGGCCTGCATGCAGCAGTGAAAAAGAAA...TCTCACTGGAGGCACTAGACATGCAAGAGGAGAAGTCTCCAGATTATTCCAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR CCA 90 bp TCTCACCATTCTGAGACACCTTCGGCTACACATTTCTCCAGCCAAAAACCTAGGAGGAACACATGTTCCTaGTCCGTTACACAACACCAA +
Preference number: 4 (lower is better)
Translates to: SHHSETPSATHFSSQKPRRNTCS*SVTQHQ
Trigger: TTGGTGTTGTGTAACGGACCAGGAACATGTGTTCCT...CCTAGGTTTTTGGCTGGAGAAATGTGTAGCCGAAGGTGTCTCAGAATGGTGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR CCA 90 bp TCTCACCATTCTGAGACACCTTCGGCTACACATTTCTCCAGCCAAAAACCTAGGGAATCTTTCCGGACATaGATAACGTTTCTACACGGC +
Preference number: 4 (lower is better)
Translates to: SHHSETPSATHFSSQKPRESFRT*ITFLHG
Trigger: GCCGTGTAGAAACGTTATCCATGTCCGGAAAGATTC...CCTAGGTTTTTGGCTGGAGAAATGTGTAGCCGAAGGTGTCTCAGAATGGTGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR CCA 90 bp TCATTTTCCTATCCATGGTGTAGAAATACATCTTCTGCCTTTTGCCTGGCAGGCAAGGCGGACAAGATTTaGGTGTCTGCTCATTGTGCG +
Preference number: 4 (lower is better)
Translates to: SFSYPWCRNTSSAFCLAGKADKI*VSAHCA
Trigger: CGCACAATGAGCAGACACCCAAATCTTGTCCGCCTT...GCCTGCCAGGCAAAAGGCAGAAGATGTATTTCTACACCATGGATAGGAAAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR CCA 90 bp CTACCACTGATGGAGACAAATGTGACTGAGGGCTTGAGGGCTTACTATTTAGCACTCAGCACTAACCTTTaGTATGGGTGGCTATGTCAC +
Preference number: 4 (lower is better)
Translates to: LPLMETNVTEGLRAYYLALSTNL*YGWLCH
Trigger: GTGACATAGCCACCCATACCAAAGGTTAGTGCTGAG...TGCTAAATAGTAAGCCCTCAAGCCCTCAGTCACATTTGTCTCCATCAGTGGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR CCA 90 bp CTACCACTGATGGAGACAAATGTGACTGAGGGCTTGAGGGCTTACTATTTAGCAGTGATTCCAGCACTTTaGAAGGCCAAGATAGGAGGA +
Preference number: 4 (lower is better)
Translates to: LPLMETNVTEGLRAYYLAVIPAL*KAKIGG
Trigger: TCCTCCTATCTTGGCCTTCCAAAGTGCTGGAATCAC...TGCTAAATAGTAAGCCCTCAAGCCCTCAGTCACATTTGTCTCCATCAGTGGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR TCA 90 bp TCATTTTCCTATCCATGGTGTAGAAATACATCTTCTGCCTTTTGCCTGGCAGGCGATACTAATACGCTCTaGTACTCCAGGGAAGCAACC +
Preference number: 4 (lower is better)
Translates to: SFSYPWCRNTSSAFCLAGDTNTL*YSREAT
Trigger: GGTTGCTTCCCTGGAGTATCAGAGCGTATTAGTATC...GCCTGCCAGGCAAAAGGCAGAAGATGTATTTCTACACCATGGATAGGAAAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR TCA 90 bp TCTCACCATTCTGAGACACCTTCGGCTACACATTTCTCCAGCCAAAAACCTAGGCTAACAAAAGAATGTTaGAGGCGGACAAGATTTGGG +
Preference number: 4 (lower is better)
Translates to: SHHSETPSATHFSSQKPRLTKEC*RRTRFG
Trigger: CCCAAATCTTGTCCGCCTTCAACATTCTTTTGTTAG...CCTAGGTTTTTGGCTGGAGAAATGTGTAGCCGAAGGTGTCTCAGAATGGTGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR TCA 90 bp GGCTGGAATAATCTGGAGACTTCTCCTCTTGCATGTCTAGTGCCTCCAGTGAGAAATTCATGTTTAAAATaGGTGGGCAGCAGGAACACA +
Preference number: 4 (lower is better)
Translates to: GWNNLETSPLACLVPPVRNSCLK*VGSRNT
Trigger: TGTGTTCCTGCTGCCCACTCATTTTAAACATGAATT...TCTCACTGGAGGCACTAGACATGCAAGAGGAGAAGTCTCCAGATTATTCCAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR TCA 90 bp TCTCACCATTCTGAGACACCTTCGGCTACACATTTCTCCAGCCAAAAACCTAGGCCATCTGAAGGTATCTaGAAAGGATTCAGAGTTGCA +
Preference number: 4 (lower is better)
Translates to: SHHSETPSATHFSSQKPRPSEGI*KGFRVA
Trigger: TGCAACTCTGAATCCTTTTCAGATACCTTCAGATGG...CCTAGGTTTTTGGCTGGAGAAATGTGTAGCCGAAGGTGTCTCAGAATGGTGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR GCA 90 bp GTAGAATTTCTGGGTCATATGATAACCCTATGTTTGATTTTTGTGAAACTGCTGCAGAGAAACGGCGCATaGGTCCAACTTCCGGGGACC +
Preference number: 4 (lower is better)
Translates to: VEFLGHMITLCLIFVKLLQRNGA*VQLPGT
Trigger: GGTCCCCGGAAGTTGGACGCATGCGCCGTTTCTCTG...CAGCAGTTTCACAAAAATCAAACATAGGGTTATCATATGACCCAGAAATTCTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR GCA 90 bp CTACCACTGATGGAGACAAATGTGACTGAGGGCTTGAGGGCTTACTATTTAGCAGTTTTCCACAGCTGCTaGACCATTCTACATTCCTAC +
Preference number: 4 (lower is better)
Translates to: LPLMETNVTEGLRAYYLAVFHSC*TILHSY
Trigger: GTAGGAATGTAGAATGGTGCAGCAGCTGTGGAAAAC...TGCTAAATAGTAAGCCCTCAAGCCCTCAGTCACATTTGTCTCCATCAGTGGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR GCA 90 bp CTACCACTGATGGAGACAAATGTGACTGAGGGCTTGAGGGCTTACTATTTAGCAACTGTTTTCCACAGCTaGTGCACCATTCTACATTCC +
Preference number: 4 (lower is better)
Translates to: LPLMETNVTEGLRAYYLATVFHS*CTILHS
Trigger: GGAATGTAGAATGGTGCAGCAGCTGTGGAAAACAGT...TGCTAAATAGTAAGCCCTCAAGCCCTCAGTCACATTTGTCTCCATCAGTGGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR GCA 90 bp GGCTGGAATAATCTGGAGACTTCTCCTCTTGCATGTCTAGTGCCTCCAGTGAGATCAAGTCCAACCATGTaGTTATTCATCTGCATATGG +
Preference number: 4 (lower is better)
Translates to: GWNNLETSPLACLVPPVRSSPTM*LFICIW
Trigger: CCATATGCAGATGAATAAGCACATGGTTGGACTTGA...TCTCACTGGAGGCACTAGACATGCAAGAGGAGAAGTCTCCAGATTATTCCAGCC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR CCA 90 bp TATGAACTCTGTGGATCAGCAAATCACAGGGCACAGAAGGGAGAGCTTTTCTCTTTATGCTCAAGGTTCTaGAGGCTTGTGGAGTGCAAA +
Preference number: 4 (lower is better)
Translates to: YELCGSANHRAQKGELFSLCSRF*RLVECK
Trigger: TTTGCACTCCACAAGCCTCCAGAACCTTGAGCATAA...AGAGAAAAGCTCTCCCTTCTGTGCCCTGTGATTTGCTGATCCACAGAGTTCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR CCA 90 bp TCTCACCATTCTGAGACACCTTCGGCTACACATTTCTCCAGCCAAAAACCTAGGTTCTTCAGTTTGAGTTaGGACTGGCGCACTATCTTT +
Preference number: 4 (lower is better)
Translates to: SHHSETPSATHFSSQKPRFFSLS*DWRTIF
Trigger: AAAGATAGTGCGCCAGTCCCAACTCAAACTGAAGAA...CCTAGGTTTTTGGCTGGAGAAATGTGTAGCCGAAGGTGTCTCAGAATGGTGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR CCA 90 bp TATGAACTCTGTGGATCAGCAAATCACAGGGCACAGAAGGGAGAGCTTTTCTCTAGGGCTGGAATAATCTaGAGACTTCTCCTCTTGCAT +
Preference number: 4 (lower is better)
Translates to: YELCGSANHRAQKGELFSRAGII*RLLLLH
Trigger: ATGCAAGAGGAGAAGTCTCCAGATTATTCCAGCCCT...AGAGAAAAGCTCTCCCTTCTGTGCCCTGTGATTTGCTGATCCACAGAGTTCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR CCA 90 bp CTACCACTGATGGAGACAAATGTGACTGAGGGCTTGAGGGCTTACTATTTAGCACTCAAATGGCAGGGCTaGAATAATCTGGAGACTTCT +
Preference number: 4 (lower is better)
Translates to: LPLMETNVTEGLRAYYLALKWQG*NNLETS
Trigger: AGAAGTCTCCAGATTATTCCAGCCCTGCCATTTGAG...TGCTAAATAGTAAGCCCTCAAGCCCTCAGTCACATTTGTCTCCATCAGTGGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR TCA 90 bp TATGAACTCTGTGGATCAGCAAATCACAGGGCACAGAAGGGAGAGCTTTTCTCTGAGTACACAGCAGCCTaGACCTATGAAAGATATAAC +
Preference number: 4 (lower is better)
Translates to: YELCGSANHRAQKGELFSEYTAA*TYERYN
Trigger: GTTATATCTTTCATAGGTTCAGGCTGCTGTGTACTC...AGAGAAAAGCTCTCCCTTCTGTGCCCTGTGATTTGCTGATCCACAGAGTTCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR TCA 90 bp GGCTGGAATAATCTGGAGACTTCTCCTCTTGCATGTCTAGTGCCTCCAGTGAGATTTACCAGAGTAATCTaGATGATCAGGAAGATGCAA +
Preference number: 4 (lower is better)
Translates to: GWNNLETSPLACLVPPVRFTRVI*MIRKMQ
Trigger: TTGCATCTTCCTGATCATTCAGATTACTCTGGTAAA...TCTCACTGGAGGCACTAGACATGCAAGAGGAGAAGTCTCCAGATTATTCCAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR TCA 90 bp GGCTGGAATAATCTGGAGACTTCTCCTCTTGCATGTCTAGTGCCTCCAGTGAGACTTCATTCCTTTGTGTaGTCGAGTAATATTCCACTA +
Preference number: 4 (lower is better)
Translates to: GWNNLETSPLACLVPPVRLHSFV*SSNIPL
Trigger: TAGTGGAATATTACTCGATCACACAAAGGAATGAAG...TCTCACTGGAGGCACTAGACATGCAAGAGGAGAAGTCTCCAGATTATTCCAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR GCA 90 bp GTAGAATTTCTGGGTCATATGATAACCCTATGTTTGATTTTTGTGAAACTGCTGCGAGAACGCACACCATaGAGAGAAACGGCGCATGCG +
Preference number: 4 (lower is better)
Translates to: VEFLGHMITLCLIFVKLLRERTP*RETAHA
Trigger: CGCATGCGCCGTTTCTCTGCATGGTGTGCGTTCTCG...CAGCAGTTTCACAAAAATCAAACATAGGGTTATCATATGACCCAGAAATTCTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR GCA 90 bp TCTCACCATTCTGAGACACCTTCGGCTACACATTTCTCCAGCCAAAAACCTAGGGATCCCAAAGTTTGTTaGTTGAGGGACATGATAGAA +
Preference number: 4 (lower is better)
Translates to: SHHSETPSATHFSSQKPRDPKVC*LRDMIE
Trigger: TTCTATCATGTCCCTCAAGCAACAAACTTTGGGATC...CCTAGGTTTTTGGCTGGAGAAATGTGTAGCCGAAGGTGTCTCAGAATGGTGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR CCA 90 bp TCATTTTCCTATCCATGGTGTAGAAATACATCTTCTGCCTTTTGCCTGGCAGGCGGTTCTGGAGGCTTGTaGAGTGCAAATTGTCATGAA +
Preference number: 4 (lower is better)
Translates to: SFSYPWCRNTSSAFCLAGGSGGL*SANCHE
Trigger: TTCATGACAATTTGCACTCCACAAGCCTCCAGAACC...GCCTGCCAGGCAAAAGGCAGAAGATGTATTTCTACACCATGGATAGGAAAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR CCA 90 bp TATGAACTCTGTGGATCAGCAAATCACAGGGCACAGAAGGGAGAGCTTTTCTCTAGTTTGAGTTGGGACTaGCGCACTATCTTTCTGAAT +
Preference number: 4 (lower is better)
Translates to: YELCGSANHRAQKGELFSSLSWD*RTIFLN
Trigger: ATTCAGAAAGATAGTGCGCCAGTCCCAACTCAAACT...AGAGAAAAGCTCTCCCTTCTGTGCCCTGTGATTTGCTGATCCACAGAGTTCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR CCA 90 bp AGGAGCTCCTGGGCCAGGCACTGCACTAACTATTGTACTTCTATTCCAGTAGACTCCTGTCATGATTTTTaGGCATCCTTTTTGAAACAG +
Preference number: 4 (lower is better)
Translates to: RSSWARHCTNYCTSIPVDSCHDF*ASFLKQ
Trigger: CTGTTTCAAAAAGGATGCCCAAAAATCATGACAGGA...GTCTACTGGAATAGAAGTACAATAGTTAGTGCAGTGCCTGGCCCAGGAGCTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR CCA 90 bp GGCTGGAATAATCTGGAGACTTCTCCTCTTGCATGTCTAGTGCCTCCAGTGAGAAAATATTATAAAAAGTaGAACAAGGGCCGGACGTGT +
Preference number: 4 (lower is better)
Translates to: GWNNLETSPLACLVPPVRKYYKK*NKGRTC
Trigger: ACACGTCCGGCCCTTGTTCCACTTTTTATAATATTT...TCTCACTGGAGGCACTAGACATGCAAGAGGAGAAGTCTCCAGATTATTCCAGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR CCA 90 bp TCTCACCATTCTGAGACACCTTCGGCTACACATTTCTCCAGCCAAAAACCTAGGAACCTTTGGTATGGGTaGCTATGTCACAGAGTTATT +
Preference number: 4 (lower is better)
Translates to: SHHSETPSATHFSSQKPRNLWYG*LCHRVI
Trigger: AATAACTCTGTGACATAGCCACCCATACCAAAGGTT...CCTAGGTTTTTGGCTGGAGAAATGTGTAGCCGAAGGTGTCTCAGAATGGTGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR CCA 90 bp AGGAGCTCCTGGGCCAGGCACTGCACTAACTATTGTACTTCTATTCCAGTAGACAAAACCTTCTTTGCCTaGATTTCTAACCTACAGAGA +
Preference number: 4 (lower is better)
Translates to: RSSWARHCTNYCTSIPVDKTFFA*ISNLQR
Trigger: TCTCTGTAGGTTAGAAATCCAGGCAAAGAAGGTTTT...GTCTACTGGAATAGAAGTACAATAGTTAGTGCAGTGCCTGGCCCAGGAGCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR CCA 90 bp GTAGAATTTCTGGGTCATATGATAACCCTATGTTTGATTTTTGTGAAACTGCTGCCCCCAGAACGGGCATaGTGGCTGACGCCTGTAATT +
Preference number: 4 (lower is better)
Translates to: VEFLGHMITLCLIFVKLLPPERA*WLTPVI
Trigger: AATTACAGGCGTCAGCCACCATGCCCGTTCTGGGGG...CAGCAGTTTCACAAAAATCAAACATAGGGTTATCATATGACCCAGAAATTCTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR CAA 72 bp TTGCTATTCAACTCACAATTGTCACCACTCCTCTTGTaGACACGGTTTCATAGCACTCTTCGTTCCAGGCTA +
Preference number: 4 (lower is better)
Translates to: LLFNSQLSPLLL*TRFHSTLRSRL
Trigger: TAGCCTGGAACGAAGAGTGCTATGAAACCGTGTCAACAAGAGGAGTGGTGACAATTGTGAGTTGAATAGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR CAA 72 bp ATCTTGCTATTCAACTCACAATTGTCACCACTCCTCTaGTTGACACGGTTTCATAGCACTCTTCGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: ILLFNSQLSPLL*LTRFHSTLRSR
Trigger: CCTGGAACGAAGAGTGCTATGAAACCGTGTCAACAAGAGGAGTGGTGACAATTGTGAGTTGAATAGCAAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR CAA 72 bp CTTCCTAGCAAGGACATCTTGCTATTCAACTCACAATaGTCACCACTCCTCTTGTTGACACGGTTTCATAGC +
Preference number: 4 (lower is better)
Translates to: LPSKDILLFNSQ*SPLLLLTRFHS
Trigger: GCTATGAAACCGTGTCAACAAGAGGAGTGGTGACAATTGTGAGTTGAATAGCAAGATGTCCTTGCTAGGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR TCA 90 bp CTACCACTGATGGAGACAAATGTGACTGAGGGCTTGAGGGCTTACTATTTAGCAGCAAGAAATTTTTGTTaGAGAGCTGGCTTAGGTTGT +
Preference number: 4 (lower is better)
Translates to: LPLMETNVTEGLRAYYLAARNFC*RAGLGC
Trigger: ACAACCTAAGCCAGCTCTTCAACAAAAATTTCTTGC...TGCTAAATAGTAAGCCCTCAAGCCCTCAGTCACATTTGTCTCCATCAGTGGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR TCA 90 bp GTAGAATTTCTGGGTCATATGATAACCCTATGTTTGATTTTTGTGAAACTGCTGGGCACGAGAATCGCTTaGACCAGGGAGGTAGAGGTT +
Preference number: 4 (lower is better)
Translates to: VEFLGHMITLCLIFVKLLGTRIA*TREVEV
Trigger: AACCTCTACCTCCCTGGTTCAAGCGATTCTCGTGCC...CAGCAGTTTCACAAAAATCAAACATAGGGTTATCATATGACCCAGAAATTCTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR GCA 90 bp GTAGAATTTCTGGGTCATATGATAACCCTATGTTTGATTTTTGTGAAACTGCTGCCAGGCTGGATGGAGTaGAATGGTGCAATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: VEFLGHMITLCLIFVKLLPGWME*NGAISA
Trigger: AGCCGAGATTGCACCATTGCACTCCATCCAGCCTGG...CAGCAGTTTCACAAAAATCAAACATAGGGTTATCATATGACCCAGAAATTCTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR GCA 90 bp GGCTGGAATAATCTGGAGACTTCTCCTCTTGCATGTCTAGTGCCTCCAGTGAGATCTAAGAACAAGGACTaGAATTCGATGGTATATAAC +
Preference number: 4 (lower is better)
Translates to: GWNNLETSPLACLVPPVRSKNKD*NSMVYN
Trigger: GTTATATACCATCGAATTGCAGTCCTTGTTCTTAGA...TCTCACTGGAGGCACTAGACATGCAAGAGGAGAAGTCTCCAGATTATTCCAGCC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR GCA 90 bp TCTCACCATTCTGAGACACCTTCGGCTACACATTTCTCCAGCCAAAAACCTAGGAAAGGTCAAGTAACTTaGCAGAAAAGGGATAGAGTT +
Preference number: 4 (lower is better)
Translates to: SHHSETPSATHFSSQKPRKGQVT*QKRDRV
Trigger: AACTCTATCCCTTTTCTGGCAAGTTACTTGACCTTT...CCTAGGTTTTTGGCTGGAGAAATGTGTAGCCGAAGGTGTCTCAGAATGGTGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR CCA 90 bp CTACCACTGATGGAGACAAATGTGACTGAGGGCTTGAGGGCTTACTATTTAGCACCTGAACTTGAATTCTaGCTTTGCTACTTACTACTC +
Preference number: 4 (lower is better)
Translates to: LPLMETNVTEGLRAYYLAPELEF*LCYLLL
Trigger: GAGTAGTAAGTAGCAAAGCCAGAATTCAAGTTCAGG...TGCTAAATAGTAAGCCCTCAAGCCCTCAGTCACATTTGTCTCCATCAGTGGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR CCA 90 bp TCATTTTCCTATCCATGGTGTAGAAATACATCTTCTGCCTTTTGCCTGGCAGGCTTTCACCTCAGCCCCTaGTTGTATGATACTAATACG +
Preference number: 4 (lower is better)
Translates to: SFSYPWCRNTSSAFCLAGFHLSP*LYDTNT
Trigger: CGTATTAGTATCATACAACCAGGGGCTGAGGTGAAA...GCCTGCCAGGCAAAAGGCAGAAGATGTATTTCTACACCATGGATAGGAAAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR CCA 90 bp TCATTTTCCTATCCATGGTGTAGAAATACATCTTCTGCCTTTTGCCTGGCAGGCGGAGCTAGAATGCCTTaGTTCAAATCTGAGCTTTGT +
Preference number: 4 (lower is better)
Translates to: SFSYPWCRNTSSAFCLAGGARMP*FKSELC
Trigger: ACAAAGCTCAGATTTGAACCAAGGCATTCTAGCTCC...GCCTGCCAGGCAAAAGGCAGAAGATGTATTTCTACACCATGGATAGGAAAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR CCA 90 bp TCATTTTCCTATCCATGGTGTAGAAATACATCTTCTGCCTTTTGCCTGGCAGGCAAAGTACCCAAGCTTTaGAGAAACTGTCTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: SFSYPWCRNTSSAFCLAGKVPKL*RNCLLL
Trigger: CAGAAGGAGACAGTTTCTCCAAAGCTTGGGTACTTT...GCCTGCCAGGCAAAAGGCAGAAGATGTATTTCTACACCATGGATAGGAAAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR TCA 90 bp TCATTTTCCTATCCATGGTGTAGAAATACATCTTCTGCCTTTTGCCTGGCAGGCTACTTACTACTCATGTaGTCTTGGACAAGTCATCTG +
Preference number: 4 (lower is better)
Translates to: SFSYPWCRNTSSAFCLAGYLLLM*SWTSHL
Trigger: CAGATGACTTGTCCAAGATCACATGAGTAGTAAGTA...GCCTGCCAGGCAAAAGGCAGAAGATGTATTTCTACACCATGGATAGGAAAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR TCA 90 bp TCATTTTCCTATCCATGGTGTAGAAATACATCTTCTGCCTTTTGCCTGGCAGGCAATCTAAGTTGGGAGTaGAGTAGAAGGAGGACAAAT +
Preference number: 4 (lower is better)
Translates to: SFSYPWCRNTSSAFCLAGNLSWE*SRRRTN
Trigger: ATTTGTCCTCCTTCTACTTCACTCCCAACTTAGATT...GCCTGCCAGGCAAAAGGCAGAAGATGTATTTCTACACCATGGATAGGAAAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR TCA 90 bp TATGAACTCTGTGGATCAGCAAATCACAGGGCACAGAAGGGAGAGCTTTTCTCTAGTATAATGAGGTCCTaGGATCAAAACGTTTGTGAA +
Preference number: 4 (lower is better)
Translates to: YELCGSANHRAQKGELFSSIMRS*DQNVCE
Trigger: TTCACAAACGTTTTGATCTCAGGACCTCATTATACT...AGAGAAAAGCTCTCCCTTCTGTGCCCTGTGATTTGCTGATCCACAGAGTTCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR TCA 90 bp TCATTTTCCTATCCATGGTGTAGAAATACATCTTCTGCCTTTTGCCTGGCAGGCATGAATTCGCTGATGTaGCATTATGTAAAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: SFSYPWCRNTSSAFCLAGMNSLM*HYVKQQ
Trigger: CTGCTGCTTTACATAATGTCACATCAGCGAATTCAT...GCCTGCCAGGCAAAAGGCAGAAGATGTATTTCTACACCATGGATAGGAAAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR GCA 90 bp TCATTTTCCTATCCATGGTGTAGAAATACATCTTCTGCCTTTTGCCTGGCAGGCAATGATACTGGTTTATaGTCAAGGTTCTGGAGGCTT +
Preference number: 4 (lower is better)
Translates to: SFSYPWCRNTSSAFCLAGNDTGL*SRFWRL
Trigger: AAGCCTCCAGAACCTTGAGCATAAACCAGTATCATT...GCCTGCCAGGCAAAAGGCAGAAGATGTATTTCTACACCATGGATAGGAAAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR GCA 90 bp TCTCACCATTCTGAGACACCTTCGGCTACACATTTCTCCAGCCAAAAACCTAGGAACGCAGGTACATTATaGTTATTTTACAGAAAGGTC +
Preference number: 4 (lower is better)
Translates to: SHHSETPSATHFSSQKPRNAGTL*LFYRKV
Trigger: GACCTTTCTGTAAAATAAGCATAATGTACCTGCGTT...CCTAGGTTTTTGGCTGGAGAAATGTGTAGCCGAAGGTGTCTCAGAATGGTGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR CCA 90 bp TCATTTTCCTATCCATGGTGTAGAAATACATCTTCTGCCTTTTGCCTGGCAGGCGCTCTGCAAAACATCTaGGACATATGTTTCTGGAAA +
Preference number: 4 (lower is better)
Translates to: SFSYPWCRNTSSAFCLAGALQNI*DICFWK
Trigger: TTTCCAGAAACATATGTCCCAGATGTTTTGCAGAGC...GCCTGCCAGGCAAAAGGCAGAAGATGTATTTCTACACCATGGATAGGAAAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR CCA 90 bp TCATTTTCCTATCCATGGTGTAGAAATACATCTTCTGCCTTTTGCCTGGCAGGCGCAGCATGTATTTTCTaGGTTTTCTTGGACTATAGC +
Preference number: 4 (lower is better)
Translates to: SFSYPWCRNTSSAFCLAGAACIF*VFLDYS
Trigger: GCTATAGTCCAAGAAAACCCAGAAAATACATGCTGC...GCCTGCCAGGCAAAAGGCAGAAGATGTATTTCTACACCATGGATAGGAAAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR CAA 72 bp AAACTGGCCCCACTAAGAAGTCAGGTTTACCTGAACTaGAATTCTGGCTTTGCTACTTACTACTCATGTGAT +
Preference number: 4 (lower is better)
Translates to: KLAPLRSQVYLN*NSGFATYYSCD
Trigger: ATCACATGAGTAGTAAGTAGCAAAGCCAGAATTCAAGTTCAGGTAAACCTGACTTCTTAGTGGGGCCAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR GCA 90 bp GTAGAATTTCTGGGTCATATGATAACCCTATGTTTGATTTTTGTGAAACTGCTGCAGGGAGGTAGAGGTTaGAGTGAGTTGAGATTGCAC +
Preference number: 4 (lower is better)
Translates to: VEFLGHMITLCLIFVKLLQGGRG*SELRLH
Trigger: GTGCAATCTCAACTCACTGCAACCTCTACCTCCCTG...CAGCAGTTTCACAAAAATCAAACATAGGGTTATCATATGACCCAGAAATTCTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR CAA 72 bp GCTAAAGTTTCCTGTCATGATTTTTGGGCATCCTTTTaGAAACAGTTAGACATTCTGACCTGGCAAGCTACT +
Preference number: 4 (lower is better)
Translates to: AKVSCHDFWASF*KQLDILTWQAT
Trigger: AGTAGCTTGCCAGGTCAGAATGTCTAACTGTTTCAAAAAGGATGCCCAAAAATCATGACAGGAAACTTTAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR TCA 90 bp GTAGAATTTCTGGGTCATATGATAACCCTATGTTTGATTTTTGTGAAACTGCTGGACATAATGTCTAGGTaGGTAGGCATTGGACAAGCT +
Preference number: 4 (lower is better)
Translates to: VEFLGHMITLCLIFVKLLDIMSR*VGIGQA
Trigger: AGCTTGTCCAATGCCTACTCACCTAGACATTATGTC...CAGCAGTTTCACAAAAATCAAACATAGGGTTATCATATGACCCAGAAATTCTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR TCA 90 bp GTAGAATTTCTGGGTCATATGATAACCCTATGTTTGATTTTTGTGAAACTGCTGCCGGCCACTGAACAATaGAGTAATCTGAGAGATGAA +
Preference number: 4 (lower is better)
Translates to: VEFLGHMITLCLIFVKLLPATEQ*SNLRDE
Trigger: TTCATCTCTCAGATTACTTCATTGTTCAGTGGCCGG...CAGCAGTTTCACAAAAATCAAACATAGGGTTATCATATGACCCAGAAATTCTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR CAA 72 bp CTCTGGACATTTCATATGAATAGAATCATGCATTTGTaGTCTTTTGTGGCTGGCTTCTGTAACTTAGCCTAC +
Preference number: 4 (lower is better)
Translates to: LWTFHMNRIMHL*SFVAGFCNLAY
Trigger: GTAGGCTAAGTTACAGAAGCCAGCCACAAAAGACAACAAATGCATGATTCTATTCATATGAAATGTCCAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR CCA 90 bp GTAGAATTTCTGGGTCATATGATAACCCTATGTTTGATTTTTGTGAAACTGCTGTTAGACATTCTGACCTaGCAAGCTACTGAGACCTTT +
Preference number: 4 (lower is better)
Translates to: VEFLGHMITLCLIFVKLLLDILT*QATETF
Trigger: AAAGGTCTCAGTAGCTTGCCAGGTCAGAATGTCTAA...CAGCAGTTTCACAAAAATCAAACATAGGGTTATCATATGACCCAGAAATTCTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR CAA 72 bp AAAATGATACTGGTTTATGCTCAAGGTTCTGGAGGCTaGTGGAGTGCAAATTGTCATGAAGCCAATTTAATA +
Preference number: 4 (lower is better)
Translates to: KMILVYAQGSGG*WSANCHEANLI
Trigger: TATTAAATTGGCTTCATGACAATTTGCACTCCACAAGCCTCCAGAACCTTGAGCATAAACCAGTATCATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR CAA 72 bp TGGGTAGAATTTCTGGGTCATATGATAACCCTATGTTaGATTTTTGTGAAACTGCTGAACTGTTTTCCACAG +
Preference number: 4 (lower is better)
Translates to: WVEFLGHMITLC*IFVKLLNCFPQ
Trigger: CTGTGGAAAACAGTTCAGCAGTTTCACAAAAATCAAACATAGGGTTATCATATGACCCAGAAATTCTACCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR TCA 90 bp GTAGAATTTCTGGGTCATATGATAACCCTATGTTTGATTTTTGTGAAACTGCTGTTGATTTCAGCCTTTTaGGATCTTGAGCAGAAAACC +
Preference number: 4 (lower is better)
Translates to: VEFLGHMITLCLIFVKLLLISAF*DLEQKT
Trigger: GGTTTTCTGCTCAAGATCTCAAAAGGCTGAAATCAA...CAGCAGTTTCACAAAAATCAAACATAGGGTTATCATATGACCCAGAAATTCTAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR CCA 90 bp GTAGAATTTCTGGGTCATATGATAACCCTATGTTTGATTTTTGTGAAACTGCTGATTTCTCCAAATCCTTaGCAGCATGTATTTTCTGGG +
Preference number: 4 (lower is better)
Translates to: VEFLGHMITLCLIFVKLLISPNP*QHVFSG
Trigger: CCCAGAAAATACATGCTGCCAAGGATTTGGAGAAAT...CAGCAGTTTCACAAAAATCAAACATAGGGTTATCATATGACCCAGAAATTCTAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR GCA 90 bp GTAGAATTTCTGGGTCATATGATAACCCTATGTTTGATTTTTGTGAAACTGCTGCTTAAGTTAAGGCTCTaGAAAACATCTGGGACATAT +
Preference number: 4 (lower is better)
Translates to: VEFLGHMITLCLIFVKLLLKLRL*KTSGTY
Trigger: ATATGTCCCAGATGTTTTGCAGAGCCTTAACTTAAG...CAGCAGTTTCACAAAAATCAAACATAGGGTTATCATATGACCCAGAAATTCTAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR GCA 90 bp GTAGAATTTCTGGGTCATATGATAACCCTATGTTTGATTTTTGTGAAACTGCTGCTAGCAAGGACATCTTaGTATTCAACTCACAATTGT +
Preference number: 4 (lower is better)
Translates to: VEFLGHMITLCLIFVKLLLARTS*YSTHNC
Trigger: ACAATTGTGAGTTGAATAGCAAGATGTCCTTGCTAG...CAGCAGTTTCACAAAAATCAAACATAGGGTTATCATATGACCCAGAAATTCTAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR CCA 90 bp GTAGAATTTCTGGGTCATATGATAACCCTATGTTTGATTTTTGTGAAACTGCTGTGGACTTGCCTACTCTaGACATTTCATATGAATAGA +
Preference number: 4 (lower is better)
Translates to: VEFLGHMITLCLIFVKLLWTCLL*TFHMNR
Trigger: TCTATTCATATGAAATGTCCAGAGTAGGCAAGTCCA...CAGCAGTTTCACAAAAATCAAACATAGGGTTATCATATGACCCAGAAATTCTAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370205.6
3UTR CAA 72 bp CTTCCTCTTTTAATATTAAGCGAAAGTACCCAAGCTTaGGAGAAACTGTCTCCTTCTGAAAGGTTATTTTTC +
Preference number: 4 (lower is better)
Translates to: LPLLILSESTQA*EKLSPSERLFF
Trigger: GAAAAATAACCTTTCAGAAGGAGACAGTTTCTCCAAAGCTTGGGTACTTTCGCTTAATATTAAAAGAGGAAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR CCA 90 bp GTAGAATTTCTGGGTCATATGATAACCCTATGTTTGATTTTTGTGAAACTGCTGTGTTCTGACAGCCAGTaGAATATGTCCTTTTATATT +
Preference number: 4 (lower is better)
Translates to: VEFLGHMITLCLIFVKLLCSDSQ*NMSFYI
Trigger: AATATAAAAGGACATATTCCACTGGCTGTCAGAACA...CAGCAGTTTCACAAAAATCAAACATAGGGTTATCATATGACCCAGAAATTCTAC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS GCA 90 bp CCGCCACAGCTCCTGCGGCCGCAGCTAGAACGAGAACGCACACCATaGAGAGAAACGGCGCATGCGTCCAACTTCCGGGGACCAGCCGCT +
Preference number: 5 (lower is better)
Translates to: PPQLLRPQLERERTP*RETAHASNFRGPAA
Trigger: AGCGGCTGGTCCCCGGAAGTTGGACGCATGCGCCGTTTCTCTGCATGGTGTGCGTTCTCGTTCTAGCTGCGGCCGCAGGAGCTGTGGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR CAA 90 bp AGCCTCTGCAGCAGGATTACCTGTGGGGGCCCAGGGAAGCTGCCCCACAGCACATGCACAGCAGGGAAATaGTGCCACCAGCCCCCTCTG +
Preference number: 5 (lower is better)
Translates to: SLCSRITCGGPGKLPHSTCTAGK*CHQPPL
Trigger: CAGAGGGGGCTGGTGGCACAATTTCCCTGCTGTGCA...TGTGCTGTGGGGCAGCTTCCCTGGGCCCCCACAGGTAATCCTGCTGCAGAGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR CAA 90 bp AGCCTCTGCAGCAGGATTACCTGTGGGGGCCCAGGGAAGCTGCCCCACAGCACAAGGCACAAGAATCGCTaGAAGCCAGGAGGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: SLCSRITCGGPGKLPHSTRHKNR*KPGGRG
Trigger: ACCTCTGCCTCCTGGCTTCAAGCGATTCTTGTGCCT...TGTGCTGTGGGGCAGCTTCCCTGGGCCCCCACAGGTAATCCTGCTGCAGAGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR CAA 90 bp AGCCTCTGCAGCAGGATTACCTGTGGGGGCCCAGGGAAGCTGCCCCACAGCACACTTCTTCAGTTTGAGTaGGGACTGGCGCACTATCTT +
Preference number: 5 (lower is better)
Translates to: SLCSRITCGGPGKLPHSTLLQFE*GLAHYL
Trigger: AAGATAGTGCGCCAGTCCCAACTCAAACTGAAGAAG...TGTGCTGTGGGGCAGCTTCCCTGGGCCCCCACAGGTAATCCTGCTGCAGAGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR CAA 90 bp AGCCTCTGCAGCAGGATTACCTGTGGGGGCCCAGGGAAGCTGCCCCACAGCACACAGGTTTACCTGAACTaGAATTCTGGCTTTGCTACT +
Preference number: 5 (lower is better)
Translates to: SLCSRITCGGPGKLPHSTQVYLN*NSGFAT
Trigger: AGTAGCAAAGCCAGAATTCAAGTTCAGGTAAACCTG...TGTGCTGTGGGGCAGCTTCCCTGGGCCCCCACAGGTAATCCTGCTGCAGAGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR CAA 90 bp AGCCTCTGCAGCAGGATTACCTGTGGGGGCCCAGGGAAGCTGCCCCACAGCACACTATTCAACTCACAATaGTCACCACTCCTCTTGTTG +
Preference number: 5 (lower is better)
Translates to: SLCSRITCGGPGKLPHSTLFNSQ*SPLLLL
Trigger: CAACAAGAGGAGTGGTGACAATTGTGAGTTGAATAG...TGTGCTGTGGGGCAGCTTCCCTGGGCCCCCACAGGTAATCCTGCTGCAGAGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS GCA 90 bp CACAGTTCCTGGTGCTCAGTCAGCACTCATCGGACAGGCATGTGTTaGTCTTCTCTGACTGCTCTGTGGACCAAATCTGGCTTCACCCTG +
Preference number: 5 (lower is better)
Translates to: HSSWCSVSTHRTGMC*SSLTALWTKSGFTL
Trigger: CAGGGTGAAGCCAGATTTGGTCCACAGAGCAGTCAGAGAAGAGCAACACATGCCTGTCCGATGAGTGCTGACTGAGCACCAGGAACTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507727.2
CDS-3UTR CAA 90 bp AGCCTCTGCAGCAGGATTACCTGTGGGGGCCCAGGGAAGCTGCCCCACAGCACATTTTGGGCATCCTTTTaGAAACAGTTAGACATTCTG +
Preference number: 5 (lower is better)
Translates to: SLCSRITCGGPGKLPHSTFWASF*KQLDIL
Trigger: CAGAATGTCTAACTGTTTCAAAAAGGATGCCCAAAA...TGTGCTGTGGGGCAGCTTCCCTGGGCCCCCACAGGTAATCCTGCTGCAGAGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR CAA 90 bp GGCTGGAATAATCTGGAGACTTCTCCTCTTGCATGTCTAGTGCCTCCAGTGAGAGACGAAGTTTCACTCTaGTCACCCAGGCTGGATGGA +
Preference number: 5 (lower is better)
Translates to: GWNNLETSPLACLVPPVRDEVSL*SPRLDG
Trigger: TCCATCCAGCCTGGGTGACAAGAGTGAAACTTCGTC...TCTCACTGGAGGCACTAGACATGCAAGAGGAGAAGTCTCCAGATTATTCCAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR CAA 90 bp AGGAGCTCCTGGGCCAGGCACTGCACTAACTATTGTACTTCTATTCCAGTAGACATGGAATTCCTGTTTTaGAGGAGCTCCTGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: RSSWARHCTNYCTSIPVDMEFLF*RSSWAR
Trigger: CCTGGCCCAGGAGCTCCTCAAAAACAGGAATTCCAT...GTCTACTGGAATAGAAGTACAATAGTTAGTGCAGTGCCTGGCCCAGGAGCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS CCA 90 bp GGTGAAAACGGTGGAGGGCCAGGACTGCTGAACCTCCCGGCTTCTTaGAATTCGGTGAATGTAGTATTTGGTATACATGTTACTAGGGTC +
Preference number: 5 (lower is better)
Translates to: GENGGGPGLLNLPAS*NSVNVVFGIHVTRV
Trigger: GACCCTAGTAACATGTATACCAAATACTACATTCACCGAATTCCAAGAAGCCGGGAGGTTCAGCAGTCCTGGCCCTCCACCGTTTTCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR CAA 90 bp GGCTGGAATAATCTGGAGACTTCTCCTCTTGCATGTCTAGTGCCTCCAGTGAGAACAATGAACTATCATTaGGCTGCCCCAGGCCCACTA +
Preference number: 5 (lower is better)
Translates to: GWNNLETSPLACLVPPVRTMNYH*AAPGPL
Trigger: TAGTGGGCCTGGGGCAGCCAAATGATAGTTCATTGT...TCTCACTGGAGGCACTAGACATGCAAGAGGAGAAGTCTCCAGATTATTCCAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR CAA 90 bp GGCTGGAATAATCTGGAGACTTCTCCTCTTGCATGTCTAGTGCCTCCAGTGAGATCACCACTCCTCTTGTaGACACGGTTTCATAGCACT +
Preference number: 5 (lower is better)
Translates to: GWNNLETSPLACLVPPVRSPLLL*TRFHST
Trigger: AGTGCTATGAAACCGTGTCAACAAGAGGAGTGGTGA...TCTCACTGGAGGCACTAGACATGCAAGAGGAGAAGTCTCCAGATTATTCCAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR CAA 90 bp TATGAACTCTGTGGATCAGCAAATCACAGGGCACAGAAGGGAGAGCTTTTCTCTGAAGGCGGACAAGATTaGGGTGTCTGCTCATTGTGC +
Preference number: 5 (lower is better)
Translates to: YELCGSANHRAQKGELFSEGGQD*GVCSLC
Trigger: GCACAATGAGCAGACACCCAAATCTTGTCCGCCTTC...AGAGAAAAGCTCTCCCTTCTGTGCCCTGTGATTTGCTGATCCACAGAGTTCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR CAA 90 bp TATGAACTCTGTGGATCAGCAAATCACAGGGCACAGAAGGGAGAGCTTTTCTCTGTGGATCACCTGAGGTaGGGAGTTCAAGATCAGCCT +
Preference number: 5 (lower is better)
Translates to: YELCGSANHRAQKGELFSVDHLR*GVQDQP
Trigger: AGGCTGATCTTGAACTCCCAACCTCAGGTGATCCAC...AGAGAAAAGCTCTCCCTTCTGTGCCCTGTGATTTGCTGATCCACAGAGTTCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR CAA 90 bp TCTCACCATTCTGAGACACCTTCGGCTACACATTTCTCCAGCCAAAAACCTAGGTGTGATTCCAGCACTTaGGAAGGCCAAGATAGGAGG +
Preference number: 5 (lower is better)
Translates to: SHHSETPSATHFSSQKPRCDSST*EGQDRR
Trigger: CCTCCTATCTTGGCCTTCCAAAGTGCTGGAATCACA...CCTAGGTTTTTGGCTGGAGAAATGTGTAGCCGAAGGTGTCTCAGAATGGTGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR CAA 90 bp TCTCACCATTCTGAGACACCTTCGGCTACACATTTCTCCAGCCAAAAACCTAGGTTTATAAGGGGAAGCTaGGGTCATCTCCTTCCTAGC +
Preference number: 5 (lower is better)
Translates to: SHHSETPSATHFSSQKPRFIRGS*GHLLPS
Trigger: GCTAGGAAGGAGATGACCCAAGCTTCCCCTTATAAA...CCTAGGTTTTTGGCTGGAGAAATGTGTAGCCGAAGGTGTCTCAGAATGGTGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR CAA 90 bp TATGAACTCTGTGGATCAGCAAATCACAGGGCACAGAAGGGAGAGCTTTTCTCTCTTGAGACCAGGAGTTaGAGACCAGTCTGGACAACA +
Preference number: 5 (lower is better)
Translates to: YELCGSANHRAQKGELFSLETRS*RPVWTT
Trigger: TGTTGTCCAGACTGGTCTCAAACTCCTGGTCTCAAG...AGAGAAAAGCTCTCCCTTCTGTGCCCTGTGATTTGCTGATCCACAGAGTTCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR CAA 90 bp GGCTGGAATAATCTGGAGACTTCTCCTCTTGCATGTCTAGTGCCTCCAGTGAGAGAAAAGGATTCAGAGTaGCAGATCAGAACTCAGCCT +
Preference number: 5 (lower is better)
Translates to: GWNNLETSPLACLVPPVREKDSE*QIRTQP
Trigger: AGGCTGAGTTCTGATCTGCAACTCTGAATCCTTTTC...TCTCACTGGAGGCACTAGACATGCAAGAGGAGAAGTCTCCAGATTATTCCAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR CAA 90 bp AGGAGCTCCTGGGCCAGGCACTGCACTAACTATTGTACTTCTATTCCAGTAGACAATGTGACTGAGGGCTaGAGGGCTTACTATTTAGCA +
Preference number: 5 (lower is better)
Translates to: RSSWARHCTNYCTSIPVDNVTEG*RAYYLA
Trigger: TGCTAAATAGTAAGCCCTCAAGCCCTCAGTCACATT...GTCTACTGGAATAGAAGTACAATAGTTAGTGCAGTGCCTGGCCCAGGAGCTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS TCA 90 bp ATTGGCACTCATTTCATCAGTGTCAGCAATGACATAATGTCTAGGTaGGTAGGCATTGGACAAGCTCCCAAGCAGCCTCAGGATCTCAGT +
Preference number: 5 (lower is better)
Translates to: IGTHFISVSNDIMSR*VGIGQAPKQPQDLS
Trigger: ACTGAGATCCTGAGGCTGCTTGGGAGCTTGTCCAATGCCTACTCACCTAGACATTATGTCATTGCTGACACTGATGAAATGAGTGCCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370205.6
ENST00000495856.1
CDS-3UTR CAA 90 bp TCATTTTCCTATCCATGGTGTAGAAATACATCTTCTGCCTTTTGCCTGGCAGGCGAACCTCCCGGCTTCTaGGAATTCGGTGAATGTAGT +
Preference number: 5 (lower is better)
Translates to: SFSYPWCRNTSSAFCLAGEPPGF*EFGECS
Trigger: ACTACATTCACCGAATTCCAAGAAGCCGGGAGGTTC...GCCTGCCAGGCAAAAGGCAGAAGATGTATTTCTACACCATGGATAGGAAAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR CAA 90 bp TCTCACCATTCTGAGACACCTTCGGCTACACATTTCTCCAGCCAAAAACCTAGGGAAGTCAGTTGCCATTaGTCAAACAATTCGCCCAAG +
Preference number: 5 (lower is better)
Translates to: SHHSETPSATHFSSQKPREVSCH*SNNSPK
Trigger: CTTGGGCGAATTGTTTGACAAATGGCAACTGACTTC...CCTAGGTTTTTGGCTGGAGAAATGTGTAGCCGAAGGTGTCTCAGAATGGTGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR CAA 90 bp GGCTGGAATAATCTGGAGACTTCTCCTCTTGCATGTCTAGTGCCTCCAGTGAGACCTAGCAAGGACATCTaGCTATTCAACTCACAATTG +
Preference number: 5 (lower is better)
Translates to: GWNNLETSPLACLVPPVRPSKDI*LFNSQL
Trigger: CAATTGTGAGTTGAATAGCAAGATGTCCTTGCTAGG...TCTCACTGGAGGCACTAGACATGCAAGAGGAGAAGTCTCCAGATTATTCCAGCC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR CAA 90 bp AGGAGCTCCTGGGCCAGGCACTGCACTAACTATTGTACTTCTATTCCAGTAGACATGAAGACAAAGACTTaGTGGGTGGGGCAAAATCTA +
Preference number: 5 (lower is better)
Translates to: RSSWARHCTNYCTSIPVDMKTKT*WVGQNL
Trigger: TAGATTTTGCCCCACCCACAAAGTCTTTGTCTTCAT...GTCTACTGGAATAGAAGTACAATAGTTAGTGCAGTGCCTGGCCCAGGAGCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR CAA 90 bp AGGAGCTCCTGGGCCAGGCACTGCACTAACTATTGTACTTCTATTCCAGTAGACAGCAGAAAACCTTCTTaGCCTGGATTTCTAACCTAC +
Preference number: 5 (lower is better)
Translates to: RSSWARHCTNYCTSIPVDSRKPS*PGFLTY
Trigger: GTAGGTTAGAAATCCAGGCAAAGAAGGTTTTCTGCT...GTCTACTGGAATAGAAGTACAATAGTTAGTGCAGTGCCTGGCCCAGGAGCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR CAA 90 bp AGGAGCTCCTGGGCCAGGCACTGCACTAACTATTGTACTTCTATTCCAGTAGACCAGCCTTTTGAGATCTaGAGCAGAAAACCTTCTTTG +
Preference number: 5 (lower is better)
Translates to: RSSWARHCTNYCTSIPVDQPFEI*SRKPSL
Trigger: CAAAGAAGGTTTTCTGCTCAAGATCTCAAAAGGCTG...GTCTACTGGAATAGAAGTACAATAGTTAGTGCAGTGCCTGGCCCAGGAGCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR CAA 90 bp AGGAGCTCCTGGGCCAGGCACTGCACTAACTATTGTACTTCTATTCCAGTAGACAGAATCATGCATTTGTaGTCTTTTGTGGCTGGCTTC +
Preference number: 5 (lower is better)
Translates to: RSSWARHCTNYCTSIPVDRIMHL*SFVAGF
Trigger: GAAGCCAGCCACAAAAGACAACAAATGCATGATTCT...GTCTACTGGAATAGAAGTACAATAGTTAGTGCAGTGCCTGGCCCAGGAGCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR CAA 90 bp TCATTTTCCTATCCATGGTGTAGAAATACATCTTCTGCCTTTTGCCTGGCAGGCCAAGGTTCTGGAGGCTaGTGGAGTGCAAATTGTCAT +
Preference number: 5 (lower is better)
Translates to: SFSYPWCRNTSSAFCLAGQGSGG*WSANCH
Trigger: ATGACAATTTGCACTCCACAAGCCTCCAGAACCTTG...GCCTGCCAGGCAAAAGGCAGAAGATGTATTTCTACACCATGGATAGGAAAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR CAA 90 bp CTACCACTGATGGAGACAAATGTGACTGAGGGCTTGAGGGCTTACTATTTAGCATCTGCTAATGGGACCTaGAGGACTCAAATTAGCCAT +
Preference number: 5 (lower is better)
Translates to: LPLMETNVTEGLRAYYLASANGT*RTQISH
Trigger: ATGGCTAATTTGAGTCCTCAAGGTCCCATTAGCAGA...TGCTAAATAGTAAGCCCTCAAGCCCTCAGTCACATTTGTCTCCATCAGTGGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR CAA 90 bp AGGAGCTCCTGGGCCAGGCACTGCACTAACTATTGTACTTCTATTCCAGTAGACAGTAGAGCATTTGGGTaGTTTCTACTTTCGGGTTAT +
Preference number: 5 (lower is better)
Translates to: RSSWARHCTNYCTSIPVDSRAFG*FLLSGY
Trigger: ATAACCCGAAAGTAGAAACAACCCAAATGCTCTACT...GTCTACTGGAATAGAAGTACAATAGTTAGTGCAGTGCCTGGCCCAGGAGCTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR CAA 90 bp AGGAGCTCCTGGGCCAGGCACTGCACTAACTATTGTACTTCTATTCCAGTAGACAATAGAATCATGCATTaGTTGTCTTTTGTGGCTGGC +
Preference number: 5 (lower is better)
Translates to: RSSWARHCTNYCTSIPVDNRIMH*LSFVAG
Trigger: GCCAGCCACAAAAGACAACAAATGCATGATTCTATT...GTCTACTGGAATAGAAGTACAATAGTTAGTGCAGTGCCTGGCCCAGGAGCTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR CAA 90 bp GTAGAATTTCTGGGTCATATGATAACCCTATGTTTGATTTTTGTGAAACTGCTGTTGGGTGTCTGCTCATaGTGCGCCAGGGCTGAAGTC +
Preference number: 5 (lower is better)
Translates to: VEFLGHMITLCLIFVKLLLGVCS*CARAEV
Trigger: GACTTCAGCCCTGGCGCACAATGAGCAGACACCCAA...CAGCAGTTTCACAAAAATCAAACATAGGGTTATCATATGACCCAGAAATTCTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR CAA 90 bp CTACCACTGATGGAGACAAATGTGACTGAGGGCTTGAGGGCTTACTATTTAGCACCTAACAAAAGAATGTaGAAGGCGGACAAGATTTGG +
Preference number: 5 (lower is better)
Translates to: LPLMETNVTEGLRAYYLAPNKRM*KADKIW
Trigger: CCAAATCTTGTCCGCCTTCAACATTCTTTTGTTAGG...TGCTAAATAGTAAGCCCTCAAGCCCTCAGTCACATTTGTCTCCATCAGTGGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR CAA 90 bp TCATTTTCCTATCCATGGTGTAGAAATACATCTTCTGCCTTTTGCCTGGCAGGCGAAAGTACCCAAGCTTaGGAGAAACTGTCTCCTTCT +
Preference number: 5 (lower is better)
Translates to: SFSYPWCRNTSSAFCLAGESTQA*EKLSPS
Trigger: AGAAGGAGACAGTTTCTCCAAAGCTTGGGTACTTTC...GCCTGCCAGGCAAAAGGCAGAAGATGTATTTCTACACCATGGATAGGAAAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR CAA 90 bp CTACCACTGATGGAGACAAATGTGACTGAGGGCTTGAGGGCTTACTATTTAGCAAATTTCTCCAAATCCTaGGCAGCATGTATTTTCTGG +
Preference number: 5 (lower is better)
Translates to: LPLMETNVTEGLRAYYLANFSKS*AACIFW
Trigger: CCAGAAAATACATGCTGCCAAGGATTTGGAGAAATT...TGCTAAATAGTAAGCCCTCAAGCCCTCAGTCACATTTGTCTCCATCAGTGGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS TCA 90 bp ACACCGATTTGGGATACTTTTCTTTCAGAGCCGGCCACTGAACAATaGAGTAATCTGAGAGATGAAACAGAATCTTTCCGGACATGGATA +
Preference number: 5 (lower is better)
Translates to: TPIWDTFLSEPATEQ*SNLRDETESFRTWI
Trigger: TATCCATGTCCGGAAAGATTCTGTTTCATCTCTCAGATTACTTCATTGTTCAGTGGCCGGCTCTGAAAGAAAAGTATCCCAAATCGGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR CAA 90 bp GTAGAATTTCTGGGTCATATGATAACCCTATGTTTGATTTTTGTGAAACTGCTGCACCTCAGCCCCTGGTaGTATGATACTAATACGCTC +
Preference number: 5 (lower is better)
Translates to: VEFLGHMITLCLIFVKLLHLSPW*YDTNTL
Trigger: GAGCGTATTAGTATCATACAACCAGGGGCTGAGGTG...CAGCAGTTTCACAAAAATCAAACATAGGGTTATCATATGACCCAGAAATTCTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR CAA 90 bp GTAGAATTTCTGGGTCATATGATAACCCTATGTTTGATTTTTGTGAAACTGCTGCTCATCTTCTTCAGTTaGAGTTGGGACTGGCGCACT +
Preference number: 5 (lower is better)
Translates to: VEFLGHMITLCLIFVKLLLIFFS*SWDWRT
Trigger: AGTGCGCCAGTCCCAACTCAAACTGAAGAAGATGAG...CAGCAGTTTCACAAAAATCAAACATAGGGTTATCATATGACCCAGAAATTCTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS-3UTR CAA 90 bp GTAGAATTTCTGGGTCATATGATAACCCTATGTTTGATTTTTGTGAAACTGCTGCCAAGGTACACCGATTaGGGATACTTTTCTTTCAGA +
Preference number: 5 (lower is better)
Translates to: VEFLGHMITLCLIFVKLLPRYTD*GYFSFR
Trigger: TCTGAAAGAAAAGTATCCCAAATCGGTGTACCTTGG...CAGCAGTTTCACAAAAATCAAACATAGGGTTATCATATGACCCAGAAATTCTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS GCA 72 bp CTCCTGCGGCCGCAGCTAGAACGAGAACGCACACCATaGAGAGAAACGGCGCATGCGTCCAACTTCCGGGGA +
Preference number: 6 (lower is better)
Translates to: LLRPQLERERTP*RETAHASNFRG
Trigger: TCCCCGGAAGTTGGACGCATGCGCCGTTTCTCTGCATGGTGTGCGTTCTCGTTCTAGCTGCGGCCGCAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS GCA 72 bp AGAACGAGAACGCACACCATGCAGAGAAACGGCGCATaGGTCCAACTTCCGGGGACCAGCCGCTGTCAAAGT +
Preference number: 6 (lower is better)
Translates to: RTRTHTMQRNGA*VQLPGTSRCQS
Trigger: ACTTTGACAGCGGCTGGTCCCCGGAAGTTGGACGCATGCGCCGTTTCTCTGCATGGTGTGCGTTCTCGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS CAA 90 bp GCACAGTTCCTGGTGCTCAGTCAGCACTCATCGGACAGGCATGTGTaGCTCTTCTCTGACTGCTCTGTGGACCAAATCTGGCTTCACCCT +
Preference number: 6 (lower is better)
Translates to: AQFLVLSQHSSDRHV*LFSDCSVDQIWLHP
Trigger: AGGGTGAAGCCAGATTTGGTCCACAGAGCAGTCAGAGAAGAGCAACACATGCCTGTCCGATGAGTGCTGACTGAGCACCAGGAACTGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507727.2
CDS GCA 72 bp TGGTGCTCAGTCAGCACTCATCGGACAGGCATGTGTTaGTCTTCTCTGACTGCTCTGTGGACCAAATCTGGC +
Preference number: 6 (lower is better)
Translates to: WCSVSTHRTGMC*SSLTALWTKSG
Trigger: GCCAGATTTGGTCCACAGAGCAGTCAGAGAAGAGCAACACATGCCTGTCCGATGAGTGCTGACTGAGCACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507727.2
CDS CAA 72 bp CTGGTGCTCAGTCAGCACTCATCGGACAGGCATGTGTaGCTCTTCTCTGACTGCTCTGTGGACCAAATCTGG +
Preference number: 6 (lower is better)
Translates to: LVLSQHSSDRHV*LFSDCSVDQIW
Trigger: CCAGATTTGGTCCACAGAGCAGTCAGAGAAGAGCAACACATGCCTGTCCGATGAGTGCTGACTGAGCACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507727.2
CDS TCA 72 bp TCAGCACTCATCGGACAGGCATGTGTTGCTCTTCTCTaGCTGCTCTGTGGACCAAATCTGGCTTCACCCTGT +
Preference number: 6 (lower is better)
Translates to: SALIGQACVALL*LLCGPNLASPC
Trigger: ACAGGGTGAAGCCAGATTTGGTCCACAGAGCAGTCAGAGAAGAGCAACACATGCCTGTCCGATGAGTGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507727.2
CDS CAA 72 bp CGGTGGAGGGCCAGGACTGCTGAACCTCCCGGCTTCTaGGAATTCGGTGAATGTAGTATTTGGTATACATGT +
Preference number: 6 (lower is better)
Translates to: RWRARTAEPPGF*EFGECSIWYTC
Trigger: ACATGTATACCAAATACTACATTCACCGAATTCCAAGAAGCCGGGAGGTTCAGCAGTCCTGGCCCTCCACCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS CCA 72 bp GGTGGAGGGCCAGGACTGCTGAACCTCCCGGCTTCTTaGAATTCGGTGAATGTAGTATTTGGTATACATGTT +
Preference number: 6 (lower is better)
Translates to: GGGPGLLNLPAS*NSVNVVFGIHV
Trigger: AACATGTATACCAAATACTACATTCACCGAATTCCAAGAAGCCGGGAGGTTCAGCAGTCCTGGCCCTCCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS CCA 72 bp GAGAAGGGCAGATACACAGATAGGAACACATGTTCCTaGTCCGTTACACAACACCAAATCTGGCTTCACCCT +
Preference number: 6 (lower is better)
Translates to: EKGRYTDRNTCS*SVTQHQIWLHP
Trigger: AGGGTGAAGCCAGATTTGGTGTTGTGTAACGGACCAGGAACATGTGTTCCTATCTGTGTATCTGCCCTTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS TCA 72 bp CATTTCATCAGTGTCAGCAATGACATAATGTCTAGGTaGGTAGGCATTGGACAAGCTCCCAAGCAGCCTCAG +
Preference number: 6 (lower is better)
Translates to: HFISVSNDIMSR*VGIGQAPKQPQ
Trigger: CTGAGGCTGCTTGGGAGCTTGTCCAATGCCTACTCACCTAGACATTATGTCATTGCTGACACTGATGAAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370205.6
ENST00000495856.1
CDS CCA 72 bp CCATTTGTCAAACAATTCGCCCAAGGTACACCGATTTaGGATACTTTTCTTTCAGAGCCGGCCACTGAACAA +
Preference number: 6 (lower is better)
Translates to: PFVKQFAQGTPI*DTFLSEPATEQ
Trigger: TTGTTCAGTGGCCGGCTCTGAAAGAAAAGTATCCCAAATCGGTGTACCTTGGGCGAATTGTTTGACAAATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS CCA 72 bp AGTAATCTGAGAGATGAAACAGAATCTTTCCGGACATaGATAACGTTTCTACACGGCAGATGCTTTCAACGT +
Preference number: 6 (lower is better)
Translates to: SNLRDETESFRT*ITFLHGRCFQR
Trigger: ACGTTGAAAGCATCTGCCGTGTAGAAACGTTATCCATGTCCGGAAAGATTCTGTTTCATCTCTCAGATTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370205.6
CDS GCA 72 bp ACACTGAAACATACAATACCTTTATTATTTAGTGAATaGCACACGACTGAAAAGTCCTGTAGTTCCAGTTAC +
Preference number: 6 (lower is better)
Translates to: TLKHTIPLLFSE*HTTEKSCSSSY
Trigger: GTAACTGGAACTACAGGACTTTTCAGTCGTGTGGCATTCACTAAATAATAAAGGTATTGTATGTTTCAGTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495856.1