RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ALG13 (Homo sapiens)

Ensembl gene IDs: ENSG00000101901

Ensembl transcript IDs: ENST00000251943.8, ENST00000371979.7, ENST00000394780.8, ENST00000436609.5, ENST00000461669.5, ENST00000468657.5, ENST00000470971.5, ENST00000471924.5, ENST00000473389.5, ENST00000474121.1, ENST00000482374.5, ENST00000486353.5, ENST00000487141.5, ENST00000489033.5, ENST00000492038.5, ENST00000495283.5, ENST00000610588.4, ENST00000621367.4, ENST00000622997.3, ENST00000623144.3, ENST00000623148.3, ENST00000623310.1, ENST00000624161.3, ENST00000624881.3, ENST00000636363.1

Found 1421 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCGCTGCAGAATCTTGGCACTTCCCAGGAGCAGAAGCAATGGACTTaGCTTGCCCAGGACAAGTCAGGACCCTGCAGGTACAATAGAAGA +
Preference number: 1 (lower is better)
Translates to: ALQNLGTSQEQKQWT*LAQDKSGPCRYNRR
Trigger: TCTTCTATTGTACCTGCAGGGTCCTGACTTGTCCTGGGCAAGCCAAGTCCATTGCTTCTGCTCCTGGGAAGTGCCAAGATTCTGCAGCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
3UTR GCA 90 bp AGCAGGGTGCAGGTAGGATGGGTAGCAGTAACAAGGGCTTGCTTATaGAGGTATCCGGAAAGCAGCCCAAAGTCTAGGCCTGAAAAGGCA +
Preference number: 1 (lower is better)
Translates to: SRVQVGWVAVTRACL*RYPESSPKSRPEKA
Trigger: TGCCTTTTCAGGCCTAGACTTTGGGCTGCTTTCCGGATACCTGCATAAGCAAGCCCTTGTTACTGCTACCCATCCTACCTGCACCCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000486353.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
3UTR GCA 90 bp GGCAAGAGGCATCCTTGGCAGTCAGCTTTCGAAACAGCCCTAAGCTaGCTAAATATTCATCCATTGATGCCTCATTCAAAGACTTCTGGC +
Preference number: 1 (lower is better)
Translates to: GKRHPWQSAFETALS*LNIHPLMPHSKTSG
Trigger: GCCAGAAGTCTTTGAATGAGGCATCAATGGATGAATATTTAGGCAGCTTAGGGCTGTTTCGAAAGCTGACTGCCAAGGATGCCTCTTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000486353.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000624881.3
3UTR CCA 90 bp AAAACAACTGCTCCGAAATGGCCCGAAAGAGGCAAGAGGCATCCTTaGCAGTCAGCTTTCGAAACAGCCCTAAGCTGCCTAAATATTCAT +
Preference number: 1 (lower is better)
Translates to: KTTAPKWPERGKRHP*QSAFETALSCLNIH
Trigger: ATGAATATTTAGGCAGCTTAGGGCTGTTTCGAAAGCTGACTGCCAAGGATGCCTCTTGCCTCTTTCGGGCCATTTCGGAGCAGTTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000486353.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000624881.3
3UTR CCA 90 bp CCTTTCCGACTGGGCATAGCATTCCAGGCAGGAACAGACATCACTTaGGTAACTGGTTTTAAGTTAGCCAGTGGAACAACATGCTTTTCC +
Preference number: 1 (lower is better)
Translates to: PFRLGIAFQAGTDIT*VTGFKLASGTTCFS
Trigger: GGAAAAGCATGTTGTTCCACTGGCTAACTTAAAACCAGTTACCCAAGTGATGTCTGTTCCTGCCTGGAATGCTATGCCCAGTCGGAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
3UTR CCA 90 bp CCTTTCCGACTGGGCATAGCATTCCAGGCAGGAACAGACATCACTTaGGTAACTGGTTTTAAGTTAGCCAGTGGAACAACATGCCTTTGT +
Preference number: 1 (lower is better)
Translates to: PFRLGIAFQAGTDIT*VTGFKLASGTTCLC
Trigger: ACAAAGGCATGTTGTTCCACTGGCTAACTTAAAACCAGTTACCCAAGTGATGTCTGTTCCTGCCTGGAATGCTATGCCCAGTCGGAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636363.1
3UTR CCA 90 bp AGATCTATAAGAGAAGTTATCATAGCTCTGGCAGCACCTTTTACCTaGGCCTGGGTAAAAATCAACTTTAGGGCCCGGCATGTTGTGCCT +
Preference number: 1 (lower is better)
Translates to: RSIREVIIALAAPFT*AWVKINFRARHVVP
Trigger: AGGCACAACATGCCGGGCCCTAAAGTTGATTTTTACCCAGGCCCAGGTAAAAGGTGCTGCCAGAGCTATGATAACTTCTCTTATAGATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
3UTR CCA 90 bp AGTATAGACTGGATAATTCTCTACATGAAGCTGCTGCTGCATCTGTaGCACATAGACCATGGAGTGCCAGTAGCTGTGGTAATAGCACTG +
Preference number: 1 (lower is better)
Translates to: SIDWIILYMKLLLHL*HIDHGVPVAVVIAL
Trigger: CAGTGCTATTACCACAGCTACTGGCACTCCATGGTCTATGTGCCACAGATGCAGCAGCAGCTTCATGTAGAGAATTATCCAGTCTATACT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
3UTR CCA 90 bp GCATTGAGGAACGGTTTGATCTACCAGAGGTGGCTCAGTATAGACTaGATAATTCTCTACATGAAGCTGCTGCTGCATCTGTGGCACATA +
Preference number: 1 (lower is better)
Translates to: ALRNGLIYQRWLSID*IILYMKLLLHLWHI
Trigger: TATGTGCCACAGATGCAGCAGCAGCTTCATGTAGAGAATTATCCAGTCTATACTGAGCCACCTCTGGTAGATCAAACCGTTCCTCAATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
3UTR CCA 90 bp TCATACTGCTGGATCTTACATACCCTGAGGTACATAATGAGAAGCTaGGGGAGATGGAGCAATACAGCCAATTGGCCCAGGATTTATAGC +
Preference number: 1 (lower is better)
Translates to: SYCWILHTLRYIMRS*GRWSNTANWPRIYS
Trigger: GCTATAAATCCTGGGCCAATTGGCTGTATTGCTCCATCTCCCCCAGCTTCTCATTATGTACCTCAGGGTATGTAAGATCCAGCAGTATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
3UTR CCA 90 bp ATAAGAGAAGTTATCATAGCTCTGGCAGCACCTTTTACCTGGGCCTaGGTAAAAATCAACTTTAGGGCCCGGCATGTTGTGCCTGTTTAT +
Preference number: 1 (lower is better)
Translates to: IREVIIALAAPFTWA*VKINFRARHVVPVY
Trigger: ATAAACAGGCACAACATGCCGGGCCCTAAAGTTGATTTTTACCCAGGCCCAGGTAAAAGGTGCTGCCAGAGCTATGATAACTTCTCTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
3UTR CCA 90 bp AAAAGTAATAGTTTCTTCCAAGCCCCTGGGCATCTGTCCATTCCCTaGGGTAAATCCATACTGGGACTCCTTATTCACACAACTCATCTG +
Preference number: 1 (lower is better)
Translates to: KSNSFFQAPGHLSIP*GKSILGLLIHTTHL
Trigger: CAGATGAGTTGTGTGAATAAGGAGTCCCAGTATGGATTTACCCCAGGGAATGGACAGATGCCCAGGGGCTTGGAAGAAACTATTACTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
3UTR TCA 90 bp GGCTGTATAGCATTCTGTGAGGAAACTGAAGTGGTACTAATAGCTTaGTTAGCCGCTGCACCGTTAGATAAGACTGGAGCTGGAACATTA +
Preference number: 1 (lower is better)
Translates to: GCIAFCEETEVVLIA*LAAAPLDKTGAGTL
Trigger: TAATGTTCCAGCTCCAGTCTTATCTAACGGTGCAGCGGCTAATCAAGCTATTAGTACCACTTCAGTTTCCTCACAGAATGCTATACAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
3UTR CCA 90 bp AGGTACATAATGAGAAGCTGGGGGAGATGGAGCAATACAGCCAATTaGCCCAGGATTTATAGCACCATGAATTTGAGAAGAACCACCATA +
Preference number: 1 (lower is better)
Translates to: RYIMRSWGRWSNTAN*PRIYSTMNLRRTTI
Trigger: TATGGTGGTTCTTCTCAAATTCATGGTGCTATAAATCCTGGGCCAATTGGCTGTATTGCTCCATCTCCCCCAGCTTCTCATTATGTACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
3UTR TCA 90 bp TCCCTCCACATAAGACTCAAAAGTTTGTTGATTTTCCCTCATATATaGGACACAAGCCTTCCTGATTTCCAAATGATGGACCTGGCTGCA +
Preference number: 1 (lower is better)
Translates to: SLHIRLKSLLIFPHI*DTSLPDFQMMDLAA
Trigger: TGCAGCCAGGTCCATCATTTGGAAATCAGGAAGGCTTGTGTCTCATATATGAGGGAAAATCAACAAACTTTTGAGTCTTATGTGGAGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000624881.3
3UTR TCA 90 bp AAACATCAAATTCTACATTACGATAGATTTCTGGATCCAGGGCTTTaGGCACCTTATAGGGGAAGGGCATCTTTGATGGATTTTCTGGAG +
Preference number: 1 (lower is better)
Translates to: KHQILHYDRFLDPGL*APYRGRASLMDFLE
Trigger: CTCCAGAAAATCCATCAAAGATGCCCTTCCCCTATAAGGTGCTCAAAGCCCTGGATCCAGAAATCTATCGTAATGTAGAATTTGATGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
3UTR TCA 90 bp AAGTTAGCATGTAATGTTAAATATGATGGCTCATCTAATATATGCTaGTTGTGCTGCTTACAGCCCAGTACCCCTCTCTTCAGTTTAACG +
Preference number: 1 (lower is better)
Translates to: KLACNVKYDGSSNIC*LCCLQPSTPLFSLT
Trigger: CGTTAAACTGAAGAGAGGGGTACTGGGCTGTAAGCAGCACAATCAGCATATATTAGATGAGCCATCATATTTAACATTACATGCTAACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474121.1
3UTR TCA 90 bp ACAAAATTCCACAAAAGGGAAGTCAGAGGCGTTACTGCACACAATTaGCAACAACGGCTTAAACCTCTGCTAAATGAAATAATGGAATTT +
Preference number: 1 (lower is better)
Translates to: TKFHKREVRGVTAHN*QQRLKPLLNEIMEF
Trigger: AAATTCCATTATTTCATTTAGCAGAGGTTTAAGCCGTTGTTGTCAATTGTGTGCAGTAACGCCTCTGACTTCCCTTTTGTGGAATTTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371979.7
3UTR CAA 90 bp GCAGGTATCCGGAAAGCAGCCCAAAGTCTAGGCCTGAAAAGGCAGTaGAAGTCAGCGCTGCAGAATCTTGGCACTTCCCAGGAGCAGAAG +
Preference number: 2 (lower is better)
Translates to: AGIRKAAQSLGLKRQ*KSALQNLGTSQEQK
Trigger: CTTCTGCTCCTGGGAAGTGCCAAGATTCTGCAGCGCTGACTTCAACTGCCTTTTCAGGCCTAGACTTTGGGCTGCTTTCCGGATACCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000471924.5
ENST00000486353.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
3UTR-3UTR CCA 90 bp GTGAGTAGTGCATTGGAGGATCGTGCCCATAATGCATACTGTGCTGCAGCCTGGGGCCAGCACTTTCCTTaGGATCTCCCAACCGTTCCA +
Preference number: 2 (lower is better)
Translates to: VSSALEDRAHNAYCAAAWGQHFP*DLPTVP
Trigger: TGGAACGGTTGGGAGATCCCAAGGAAAGTGCTGGCC...CCAGGCTGCAGCACAGTATGCATTATGGGCACGATCCTCCAATGCACTACTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
3UTR CAA 90 bp CACAGGAATAAGGTGGAGGTGGTAGTGGTGGTGGTGGTTGTAAGTTaGAAGTCTCTCCCACATCAAGAGCAGGAGGAGGAGGAGGAGGAG +
Preference number: 2 (lower is better)
Translates to: HRNKVEVVVVVVVVS*KSLPHQEQEEEEEE
Trigger: CTCCTCCTCCTCCTCCTCCTGCTCTTGATGTGGGAGAGACTTCAAACTTACAACCACCACCACCACTACCACCTCCACCTTATTCCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470971.5
ENST00000623148.3
3UTR-3UTR GCA 90 bp TCTTCCAAGCCCCTGGGCATCTGTCCATTCCCTGGGGTAAATCCATACTGGGACACAAGGGCTTGCTTATaGAGGTATCCGGAAAGCAGC +
Preference number: 2 (lower is better)
Translates to: SSKPLGICPFPGVNPYWDTRACL*RYPESS
Trigger: GCTGCTTTCCGGATACCTGCATAAGCAAGCCCTTGT...GTCCCAGTATGGATTTACCCCAGGGAATGGACAGATGCCCAGGGGCTTGGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
3UTR-3UTR GCA 90 bp GGCCTGAAAAGGCAGTTGAAGTCAGCGCTGCAGAATCTTGGCACTTCCCAGGAGACAAGGGCTTGCTTATaGAGGTATCCGGAAAGCAGC +
Preference number: 2 (lower is better)
Translates to: GLKRQLKSALQNLGTSQETRACL*RYPESS
Trigger: GCTGCTTTCCGGATACCTGCATAAGCAAGCCCTTGT...CTCCTGGGAAGTGCCAAGATTCTGCAGCGCTGACTTCAACTGCCTTTTCAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000486353.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
3UTR-3UTR CCA 90 bp CCTGAGGTACATAATGAGAAGCTGGGGGAGATGGAGCAATACAGCCAATTGGCCGGCCAGCACTTTCCTTaGGATCTCCCAACCGTTCCA +
Preference number: 2 (lower is better)
Translates to: PEVHNEKLGEMEQYSQLAGQHFP*DLPTVP
Trigger: TGGAACGGTTGGGAGATCCCAAGGAAAGTGCTGGCC...GGCCAATTGGCTGTATTGCTCCATCTCCCCCAGCTTCTCATTATGTACCTCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
3UTR-3UTR CCA 90 bp GGAATAATCTGGCACAACCGGAAGGCAGGAGTCAAAACCTGGCAAAGGTGGCTGTTTCTTCCAAGCCCCTaGGCATCTGTCCATTCCCTG +
Preference number: 2 (lower is better)
Translates to: GIIWHNRKAGVKTWQRWLFLPSP*ASVHSL
Trigger: CAGGGAATGGACAGATGCCCAGGGGCTTGGAAGAAA...CAGCCACCTTTGCCAGGTTTTGACTCCTGCCTTCCGGTTGTGCCAGATTATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
3UTR CAA 90 bp TGCAGAATCTTGGCACTTCCCAGGAGCAGAAGCAATGGACTTGGCTaGCCCAGGACAAGTCAGGACCCTGCAGGTACAATAGAAGAGATG +
Preference number: 2 (lower is better)
Translates to: CRILALPRSRSNGLG*PRTSQDPAGTIEEM
Trigger: CATCTCTTCTATTGTACCTGCAGGGTCCTGACTTGTCCTGGGCAAGCCAAGTCCATTGCTTCTGCTCCTGGGAAGTGCCAAGATTCTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
3UTR-3UTR CCA 90 bp CAGTTGAAGTCAGCGCTGCAGAATCTTGGCACTTCCCAGGAGCAGAAGCAATGGCAGAAGCAATGGACTTaGCTTGCCCAGGACAAGTCA +
Preference number: 2 (lower is better)
Translates to: QLKSALQNLGTSQEQKQWQKQWT*LAQDKS
Trigger: TGACTTGTCCTGGGCAAGCCAAGTCCATTGCTTCTG...CCATTGCTTCTGCTCCTGGGAAGTGCCAAGATTCTGCAGCGCTGACTTCAACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000471924.5
ENST00000486353.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
3UTR-3UTR CCA 90 bp GTGAGTAGTGCATTGGAGGATCGTGCCCATAATGCATACTGTGCTGCAGCCTGGCAGAAGCAATGGACTTaGCTTGCCCAGGACAAGTCA +
Preference number: 2 (lower is better)
Translates to: VSSALEDRAHNAYCAAAWQKQWT*LAQDKS
Trigger: TGACTTGTCCTGGGCAAGCCAAGTCCATTGCTTCTG...CCAGGCTGCAGCACAGTATGCATTATGGGCACGATCCTCCAATGCACTACTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
3UTR-3UTR CCA 90 bp GTTTCTTCCAAGCCCCTGGGCATCTGTCCATTCCCTGGGGTAAATCCATACTGGGGCAAGAGGCATCCTTaGCAGTCAGCTTTCGAAACA +
Preference number: 2 (lower is better)
Translates to: VSSKPLGICPFPGVNPYWGKRHP*QSAFET
Trigger: TGTTTCGAAAGCTGACTGCCAAGGATGCCTCTTGCC...CCAGTATGGATTTACCCCAGGGAATGGACAGATGCCCAGGGGCTTGGAAGAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
3UTR-3UTR CCA 90 bp GCTGCATCTGTGGCACATAGACCATGGAGTGCCAGTAGCTGTGGTAATAGCACTACAACTGCTCCGAAATaGCCCGAAAGAGGCAAGAGG +
Preference number: 2 (lower is better)
Translates to: AASVAHRPWSASSCGNSTTTAPK*PERGKR
Trigger: CCTCTTGCCTCTTTCGGGCCATTTCGGAGCAGTTGT...AGTGCTATTACCACAGCTACTGGCACTCCATGGTCTATGTGCCACAGATGCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
3UTR-3UTR CCA 90 bp CTGGCCAGCACTTTCCTTGGGATCTCCCAACCGTTCCAGGTATTTCTCAAAAGAGGCCAGCACTTTCCTTaGGATCTCCCAACCGTTCCA +
Preference number: 2 (lower is better)
Translates to: LASTFLGISQPFQVFLKRGQHFP*DLPTVP
Trigger: TGGAACGGTTGGGAGATCCCAAGGAAAGTGCTGGCC...TCTTTTGAGAAATACCTGGAACGGTTGGGAGATCCCAAGGAAAGTGCTGGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000487141.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
3UTR-3UTR CCA 90 bp TTGCCTGAGCTATGTCCCCGCCTTCCAACACAGTATCCTGAAGTAGCAGGAACCGCTCTTATTTCCAGCTaGCCAGCACTTTCCTTGGGA +
Preference number: 2 (lower is better)
Translates to: LPELCPRLPTQYPEVAGTALISS*PALSLG
Trigger: TCCCAAGGAAAGTGCTGGCCAGCTGGAAATAAGAGC...GGTTCCTGCTACTTCAGGATACTGTGTTGGAAGGCGGGGACATAGCTCAGGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
3UTR CAA 90 bp TGCTTCCGCCTGTATGCCATCTTCTCTCCTCACCTCACTGTAGCATaGAGGAACGGTTTGATCTACCAGAGGTGGCTCAGTATAGACTGG +
Preference number: 2 (lower is better)
Translates to: CFRLYAIFSPHLTVA*RNGLIYQRWLSIDW
Trigger: CCAGTCTATACTGAGCCACCTCTGGTAGATCAAACCGTTCCTCAATGCTACAGTGAGGTGAGGAGAGAAGATGGCATACAGGCGGAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
3UTR-3UTR GCA 90 bp GCTGCAAAACAACTGCTCCGAAATGGCCCGAAAGAGGCAAGAGGCATCCTTGGCACAGCTTCCTGCACCTaGGTGACTAATAACAAGATC +
Preference number: 2 (lower is better)
Translates to: AAKQLLRNGPKEARGILGTASCT*VTNNKI
Trigger: GATCTTGTTATTAGTCACGCAGGTGCAGGAAGCTGT...GCCAAGGATGCCTCTTGCCTCTTTCGGGCCATTTCGGAGCAGTTGTTTTGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495283.5
ENST00000623144.3
3UTR-3UTR GCA 90 bp TTGCCTGAGCTATGTCCCCGCCTTCCAACACAGTATCCTGAAGTAGCAGGAACCCTTGAGGCAAATCACTaGCGCTTGGATCACAGGAAT +
Preference number: 2 (lower is better)
Translates to: LPELCPRLPTQYPEVAGTLEANH*RLDHRN
Trigger: ATTCCTGTGATCCAAGCGGCAGTGATTTGCCTCAAG...GGTTCCTGCTACTTCAGGATACTGTGTTGGAAGGCGGGGACATAGCTCAGGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470971.5
ENST00000623148.3
3UTR-3UTR CCA 90 bp AGCAGCCCAAAGTCTAGGCCTGAAAAGGCAGTTGAAGTCAGCGCTGCAGAATCTCAGAAGCAATGGACTTaGCTTGCCCAGGACAAGTCA +
Preference number: 2 (lower is better)
Translates to: SSPKSRPEKAVEVSAAESQKQWT*LAQDKS
Trigger: TGACTTGTCCTGGGCAAGCCAAGTCCATTGCTTCTG...AGATTCTGCAGCGCTGACTTCAACTGCCTTTTCAGGCCTAGACTTTGGGCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000471924.5
ENST00000486353.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
3UTR-3UTR CCA 90 bp TTGAAGTCAGCGCTGCAGAATCTTGGCACTTCCCAGGAGCAGAAGCAATGGACTCAGAAGCAATGGACTTaGCTTGCCCAGGACAAGTCA +
Preference number: 2 (lower is better)
Translates to: LKSALQNLGTSQEQKQWTQKQWT*LAQDKS
Trigger: TGACTTGTCCTGGGCAAGCCAAGTCCATTGCTTCTG...AGTCCATTGCTTCTGCTCCTGGGAAGTGCCAAGATTCTGCAGCGCTGACTTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000471924.5
ENST00000486353.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
3UTR-3UTR CCA 90 bp AATCTGGCACAACCGGAAGGCAGGAGTCAAAACCTGGCAAAGGTGGCTGCCCATACCTTGTCTCGGAGATaGATGCTGAGGATGAAAATG +
Preference number: 2 (lower is better)
Translates to: NLAQPEGRSQNLAKVAAHTLSRR*MLRMKM
Trigger: CATTTTCATCCTCAGCATCCATCTCCGAGACAAGGT...ATGGGCAGCCACCTTTGCCAGGTTTTGACTCCTGCCTTCCGGTTGTGCCAGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
3UTR-3UTR CCA 90 bp GGAATAATCTGGCACAACCGGAAGGCAGGAGTCAAAACCTGGCAAAGGTGGCTGGCAGCACCTTTTACCTaGGCCTGGGTAAAAATCAAC +
Preference number: 2 (lower is better)
Translates to: GIIWHNRKAGVKTWQRWLAAPFT*AWVKIN
Trigger: GTTGATTTTTACCCAGGCCCAGGTAAAAGGTGCTGC...CAGCCACCTTTGCCAGGTTTTGACTCCTGCCTTCCGGTTGTGCCAGATTATTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
3UTR-3UTR GCA 90 bp AAGAGGCAAGAGGCATCCTTGGCAGTCAGCTTTCGAAACAGCCCTAAGCTGCCTACAGCTTCCTGCACCTaGGTGACTAATAACAAGATC +
Preference number: 2 (lower is better)
Translates to: KRQEASLAVSFRNSPKLPTASCT*VTNNKI
Trigger: GATCTTGTTATTAGTCACGCAGGTGCAGGAAGCTGT...AGGCAGCTTAGGGCTGTTTCGAAAGCTGACTGCCAAGGATGCCTCTTGCCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495283.5
ENST00000623144.3
3UTR-3UTR GCA 90 bp CTGTGGCACATAGACCATGGAGTGCCAGTAGCTGTGGTAATAGCACTGCAATCCGCAGTAACAAGGGCTTaGTTATGCAGGTATCCGGAA +
Preference number: 2 (lower is better)
Translates to: LWHIDHGVPVAVVIALQSAVTRA*LCRYPE
Trigger: TTCCGGATACCTGCATAAGCAAGCCCTTGTTACTGC...GGATTGCAGTGCTATTACCACAGCTACTGGCACTCCATGGTCTATGTGCCACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
3UTR-3UTR CCA 90 bp TTCCAGGCAGGAACAGACATCACTTGGGTAACTGGTTTTAAGTTAGCCAGTGGACAGGAGCAGAAGCAATaGACTTGGCTTGCCCAGGAC +
Preference number: 2 (lower is better)
Translates to: FQAGTDITWVTGFKLASGQEQKQ*TWLAQD
Trigger: GTCCTGGGCAAGCCAAGTCCATTGCTTCTGCTCCTG...TCCACTGGCTAACTTAAAACCAGTTACCCAAGTGATGTCTGTTCCTGCCTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
3UTR-3UTR CCA 90 bp CTGGCCAGCACTTTCCTTGGGATCTCCCAACCGTTCCAGGTATTTCTCAAAAGAGCTCTTATTTCCAGCTaGCCAGCACTTTCCTTGGGA +
Preference number: 2 (lower is better)
Translates to: LASTFLGISQPFQVFLKRALISS*PALSLG
Trigger: TCCCAAGGAAAGTGCTGGCCAGCTGGAAATAAGAGC...TCTTTTGAGAAATACCTGGAACGGTTGGGAGATCCCAAGGAAAGTGCTGGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000487141.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
3UTR-3UTR CCA 90 bp ATAATCTGGCACAACCGGAAGGCAGGAGTCAAAACCTGGCAAAGGTGGCTGCCCATCTGTGACATAAGTTaGAGGTTTTCCAGGAAAGCG +
Preference number: 2 (lower is better)
Translates to: IIWHNRKAGVKTWQRWLPICDIS*RFSRKA
Trigger: CGCTTTCCTGGAAAACCTCCAACTTATGTCACAGAT...GGGCAGCCACCTTTGCCAGGTTTTGACTCCTGCCTTCCGGTTGTGCCAGATTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
3UTR-3UTR CCA 90 bp ATAATCTGGCACAACCGGAAGGCAGGAGTCAAAACCTGGCAAAGGTGGCTGCCCATTACGATAGATTTCTaGATCCAGGGCTTTGAGCAC +
Preference number: 2 (lower is better)
Translates to: IIWHNRKAGVKTWQRWLPITIDF*IQGFEH
Trigger: GTGCTCAAAGCCCTGGATCCAGAAATCTATCGTAAT...GGGCAGCCACCTTTGCCAGGTTTTGACTCCTGCCTTCCGGTTGTGCCAGATTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
3UTR-3UTR CCA 90 bp CTGAGGTACATAATGAGAAGCTGGGGGAGATGGAGCAATACAGCCAATTGGCCCCATCTGTCCATTCCCTaGGGTAAATCCATACTGGGA +
Preference number: 2 (lower is better)
Translates to: LRYIMRSWGRWSNTANWPHLSIP*GKSILG
Trigger: TCCCAGTATGGATTTACCCCAGGGAATGGACAGATG...GGGCCAATTGGCTGTATTGCTCCATCTCCCCCAGCTTCTCATTATGTACCTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
3UTR CAA 90 bp CGACTCAGTACTGAAGGGTTCAGGTACCACCGTTCCTCTACCAATTaGCAGGATAAGTCGGTTGTAACCAAGGCTCTCGATTTTCTGTGG +
Preference number: 2 (lower is better)
Translates to: RLSTEGFRYHRSSTN*QDKSVVTKALDFLW
Trigger: CCACAGAAAATCGAGAGCCTTGGTTACAACCGACTTATCCTGCAAATTGGTAGAGGAACGGTGGTACCTGAACCCTTCAGTACTGAGTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000468657.5
ENST00000471924.5
ENST00000489033.5
ENST00000622997.3
ENST00000623144.3
ENST00000623148.3
3UTR CAA 90 bp CAAAACAACTGCTCCGAAATGGCCCGAAAGAGGCAAGAGGCATCCTaGGCAGTCAGCTTTCGAAACAGCCCTAAGCTGCCTAAATATTCA +
Preference number: 2 (lower is better)
Translates to: QNNCSEMARKRQEAS*AVSFRNSPKLPKYS
Trigger: TGAATATTTAGGCAGCTTAGGGCTGTTTCGAAAGCTGACTGCCAAGGATGCCTCTTGCCTCTTTCGGGCCATTTCGGAGCAGTTGTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000486353.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000624881.3
3UTR-3UTR TCA 90 bp GCTGCATCTGTGGCACATAGACCATGGAGTGCCAGTAGCTGTGGTAATAGCACTAGACACAAGCCTTCCTaGTTTCCAAATGATGGACCT +
Preference number: 2 (lower is better)
Translates to: AASVAHRPWSASSCGNSTRHKPS*FPNDGP
Trigger: AGGTCCATCATTTGGAAATCAGGAAGGCTTGTGTCT...AGTGCTATTACCACAGCTACTGGCACTCCATGGTCTATGTGCCACAGATGCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
3UTR-3UTR TCA 90 bp AATCTGGCACAACCGGAAGGCAGGAGTCAAAACCTGGCAAAGGTGGCTGCCCATATTTTCCCTCATATATaGGACACAAGCCTTCCTGAT +
Preference number: 2 (lower is better)
Translates to: NLAQPEGRSQNLAKVAAHIFPHI*DTSLPD
Trigger: ATCAGGAAGGCTTGTGTCTCATATATGAGGGAAAAT...ATGGGCAGCCACCTTTGCCAGGTTTTGACTCCTGCCTTCCGGTTGTGCCAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
3UTR-3UTR TCA 90 bp AATCTGGCACAACCGGAAGGCAGGAGTCAAAACCTGGCAAAGGTGGCTGCCCATACAGCTGCACTTGACTaGAATTGTTTTGAGTACACA +
Preference number: 2 (lower is better)
Translates to: NLAQPEGRSQNLAKVAAHTAALD*NCFEYT
Trigger: TGTGTACTCAAAACAATTTCAGTCAAGTGCAGCTGT...ATGGGCAGCCACCTTTGCCAGGTTTTGACTCCTGCCTTCCGGTTGTGCCAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
3UTR-3UTR TCA 90 bp GTGGTGGTGGTTGTAAGTTTGAAGTCTCTCCCACATCAAGAGCAGGAGGAGGAGTCCAACACAGTATCCTaGAGTAGCAGGAACCATTGT +
Preference number: 2 (lower is better)
Translates to: VVVVVSLKSLPHQEQEEESNTVS*SSRNHC
Trigger: ACAATGGTTCCTGCTACTTCAGGATACTGTGTTGGA...CTCCTCCTCCTGCTCTTGATGTGGGAGAGACTTCAAACTTACAACCACCACCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470971.5
ENST00000623148.3
3UTR-3UTR TCA 90 bp GGAATAATCTGGCACAACCGGAAGGCAGGAGTCAAAACCTGGCAAAGGTGGCTGAGGAGACATAGAACATaGCTTTCTGTCCTGAAGAGA +
Preference number: 2 (lower is better)
Translates to: GIIWHNRKAGVKTWQRWLRRHRT*LSVLKR
Trigger: TCTCTTCAGGACAGAAAGTCATGTTCTATGTCTCCT...CAGCCACCTTTGCCAGGTTTTGACTCCTGCCTTCCGGTTGTGCCAGATTATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
3UTR-3UTR GCA 90 bp ACTGCTCCGAAATGGCCCGAAAGAGGCAAGAGGCATCCTTGGCAGTCAGCTTTCGAAACAGCCCTAAGCTaGCTAAATATTCATCCATTG +
Preference number: 2 (lower is better)
Translates to: TAPKWPERGKRHPWQSAFETALS*LNIHPL
Trigger: CAATGGATGAATATTTAGGCAGCTTAGGGCTGTTTC...GAAAGCTGACTGCCAAGGATGCCTCTTGCCTCTTTCGGGCCATTTCGGAGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000486353.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000624881.3
3UTR-3UTR GCA 90 bp GGAATAATCTGGCACAACCGGAAGGCAGGAGTCAAAACCTGGCAAAGGTGGCTGGGAAGCTGCAACTGCTaGAATATTTCCCATCATCTT +
Preference number: 2 (lower is better)
Translates to: GIIWHNRKAGVKTWQRWLGSCNC*NISHHL
Trigger: AAGATGATGGGAAATATTGCAGCAGTTGCAGCTTCC...CAGCCACCTTTGCCAGGTTTTGACTCCTGCCTTCCGGTTGTGCCAGATTATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
3UTR-3UTR CCA 90 bp CTTTCCTTGGGATCTCCCAACCGTTCCAGGTATTTCTCAAAAGATCCCTCCACACAGAAGCAATGGACTTaGCTTGCCCAGGACAAGTCA +
Preference number: 2 (lower is better)
Translates to: LSLGSPNRSRYFSKDPSTQKQWT*LAQDKS
Trigger: TGACTTGTCCTGGGCAAGCCAAGTCCATTGCTTCTG...TGTGGAGGGATCTTTTGAGAAATACCTGGAACGGTTGGGAGATCCCAAGGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
3UTR-3UTR CCA 90 bp GTGAGTAGTGCATTGGAGGATCGTGCCCATAATGCATACTGTGCTGCAGCCTGGATTACGATAGATTTCTaGATCCAGGGCTTTGAGCAC +
Preference number: 2 (lower is better)
Translates to: VSSALEDRAHNAYCAAAWITIDF*IQGFEH
Trigger: GTGCTCAAAGCCCTGGATCCAGAAATCTATCGTAAT...CCAGGCTGCAGCACAGTATGCATTATGGGCACGATCCTCCAATGCACTACTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
3UTR-3UTR CCA 90 bp GGAATAATCTGGCACAACCGGAAGGCAGGAGTCAAAACCTGGCAAAGGTGGCTGATTACGATAGATTTCTaGATCCAGGGCTTTGAGCAC +
Preference number: 2 (lower is better)
Translates to: GIIWHNRKAGVKTWQRWLITIDF*IQGFEH
Trigger: GTGCTCAAAGCCCTGGATCCAGAAATCTATCGTAAT...CAGCCACCTTTGCCAGGTTTTGACTCCTGCCTTCCGGTTGTGCCAGATTATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
3UTR-3UTR CCA 90 bp CCTGAGGTACATAATGAGAAGCTGGGGGAGATGGAGCAATACAGCCAATTGGCCACCTTGTCTCGGAGATaGATGCTGAGGATGAAAATG +
Preference number: 2 (lower is better)
Translates to: PEVHNEKLGEMEQYSQLATLSRR*MLRMKM
Trigger: CATTTTCATCCTCAGCATCCATCTCCGAGACAAGGT...GGCCAATTGGCTGTATTGCTCCATCTCCCCCAGCTTCTCATTATGTACCTCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
3UTR CAA 90 bp ATGCAGAAAATTTTTCTGGCTGGCCAGGAGGATAACATTTCAGTGTaGATAAGTCCATTGACTGTAACAGCCCAGGAAGCGTGCTGGCCC +
Preference number: 2 (lower is better)
Translates to: MQKIFLAGQEDNISV*ISPLTVTAQEACWP
Trigger: GGGCCAGCACGCTTCCTGGGCTGTTACAGTCAATGGACTTATCAACACTGAAATGTTATCCTCCTGGCCAGCCAGAAAAATTTTCTGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000473389.5
ENST00000492038.5
3UTR CAA 90 bp CCATTTTCACTCTGGCCATTGCCCTCCTCTAAATTCAAAGTCTGTTaGCCTGAGCTATGTCCCCGCCTTCCAACACAGTATCCTGAAGTA +
Preference number: 2 (lower is better)
Translates to: PFSLWPLPSSKFKVC*PELCPRLPTQYPEV
Trigger: TACTTCAGGATACTGTGTTGGAAGGCGGGGACATAGCTCAGGCAAACAGACTTTGAATTTAGAGGAGGGCAATGGCCAGAGTGAAAATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
3UTR-3UTR TCA 90 bp AGATCTATAAGAGAAGTTATCATAGCTCTGGCAGCACCTTTTACCTGGGCCTGGATTGCCAGCTGTCTGTaGGTAGTGCATTGGAGGATC +
Preference number: 2 (lower is better)
Translates to: RSIREVIIALAAPFTWAWIASCL*VVHWRI
Trigger: GATCCTCCAATGCACTACTCACAGACAGCTGGCAAT...CCAGGCCCAGGTAAAAGGTGCTGCCAGAGCTATGATAACTTCTCTTATAGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
3UTR-3UTR TCA 90 bp CACTGTAGCATTGAGGAACGGTTTGATCTACCAGAGGTGGCTCAGTATAGACTGCAACTCATCTGGCGGTaGCTACGTCTAAATGAACGA +
Preference number: 2 (lower is better)
Translates to: HCSIEERFDLPEVAQYRLQLIWR*LRLNER
Trigger: TCGTTCATTTAGACGTAGTCACCGCCAGATGAGTTG...CAGTCTATACTGAGCCACCTCTGGTAGATCAAACCGTTCCTCAATGCTACAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
3UTR-3UTR TCA 90 bp CCTGAGGTACATAATGAGAAGCTGGGGGAGATGGAGCAATACAGCCAATTGGCCCATGACTTTCTGTCCTaGAGAGACAAGTTTGCTGTA +
Preference number: 2 (lower is better)
Translates to: PEVHNEKLGEMEQYSQLAHDFLS*RDKFAV
Trigger: TACAGCAAACTTGTCTCTTCAGGACAGAAAGTCATG...GGCCAATTGGCTGTATTGCTCCATCTCCCCCAGCTTCTCATTATGTACCTCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
3UTR-3UTR TCA 90 bp CCTGAGGTACATAATGAGAAGCTGGGGGAGATGGAGCAATACAGCCAATTGGCCAGGAGACATAGAACATaGCTTTCTGTCCTGAAGAGA +
Preference number: 2 (lower is better)
Translates to: PEVHNEKLGEMEQYSQLARRHRT*LSVLKR
Trigger: TCTCTTCAGGACAGAAAGTCATGTTCTATGTCTCCT...GGCCAATTGGCTGTATTGCTCCATCTCCCCCAGCTTCTCATTATGTACCTCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
3UTR-3UTR CCA 90 bp AGGGTGCAGGTAGGATGGGTAGCAGTAACAAGGGCTTGCTTATGCAGGTATCCGTATAACCACTACGAGTaGCTTTCCTTTTTCCAGAGT +
Preference number: 2 (lower is better)
Translates to: RVQVGWVAVTRACLCRYPYNHYE*LSFFQS
Trigger: ACTCTGGAAAAAGGAAAGCCACTCGTAGTGGTTATA...CGGATACCTGCATAAGCAAGCCCTTGTTACTGCTACCCATCCTACCTGCACCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
3UTR-3UTR CCA 90 bp GGCCATTGCCCTCCTCTAAATTCAAAGTCTGTTTGCCTGAGCTATGTCCCCGCCTATAACCACTACGAGTaGCTTTCCTTTTTCCAGAGT +
Preference number: 2 (lower is better)
Translates to: GHCPPLNSKSVCLSYVPAYNHYE*LSFFQS
Trigger: ACTCTGGAAAAAGGAAAGCCACTCGTAGTGGTTATA...GGCGGGGACATAGCTCAGGCAAACAGACTTTGAATTTAGAGGAGGGCAATGGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
3UTR-3UTR CCA 90 bp TCTCGGAGATGGATGCTGAGGATGAAAATGTTCATTAGACATAACATTGCCAGCCAGGAGCAGAAGCAATaGACTTGGCTTGCCCAGGAC +
Preference number: 2 (lower is better)
Translates to: SRRWMLRMKMFIRHNIASQEQKQ*TWLAQD
Trigger: GTCCTGGGCAAGCCAAGTCCATTGCTTCTGCTCCTG...GCTGGCAATGTTATGTCTAATGAACATTTTCATCCTCAGCATCCATCTCCGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
3UTR-3UTR CCA 90 bp TCCTTTATTGTAGCCCTCTGGTATATTTTCAGCATTGTAGCAGGCACCCCACTCGGCAAGAGGCATCCTTaGCAGTCAGCTTTCGAAACA +
Preference number: 2 (lower is better)
Translates to: SFIVALWYIFSIVAGTPLGKRHP*QSAFET
Trigger: TGTTTCGAAAGCTGACTGCCAAGGATGCCTCTTGCC...GAGTGGGGTGCCTGCTACAATGCTGAAAATATACCAGAGGGCTACAATAAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
3UTR-3UTR CCA 90 bp GTGGTGGTGGTTGTAAGTTTGAAGTCTCTCCCACATCAAGAGCAGGAGGAGGAGTTGATCTACCAGAGGTaGCTCAGTATAGACTGGATA +
Preference number: 2 (lower is better)
Translates to: VVVVVSLKSLPHQEQEEELIYQR*LSIDWI
Trigger: TATCCAGTCTATACTGAGCCACCTCTGGTAGATCAA...CTCCTCCTCCTGCTCTTGATGTGGGAGAGACTTCAAACTTACAACCACCACCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470971.5
ENST00000623148.3
3UTR-3UTR CCA 90 bp CACTGTAGCATTGAGGAACGGTTTGATCTACCAGAGGTGGCTCAGTATAGACTGCAAATCACTGCCGCTTaGATCACAGGAATAAGGTGG +
Preference number: 2 (lower is better)
Translates to: HCSIEERFDLPEVAQYRLQITAA*ITGIRW
Trigger: CCACCTTATTCCTGTGATCCAAGCGGCAGTGATTTG...CAGTCTATACTGAGCCACCTCTGGTAGATCAAACCGTTCCTCAATGCTACAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470971.5
ENST00000623148.3
3UTR CAA 90 bp ATGCAGAAAATTTTTCTGGCTGGCCAGGAGGATAACATTTCAGTGTaGATAAGTCCATTGACTGTAACAGCCCAGGAAGCGTGCTGCAGG +
Preference number: 2 (lower is better)
Translates to: MQKIFLAGQEDNISV*ISPLTVTAQEACCR
Trigger: CCTGCAGCACGCTTCCTGGGCTGTTACAGTCAATGGACTTATCAACACTGAAATGTTATCCTCCTGGCCAGCCAGAAAAATTTTCTGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000468657.5
ENST00000482374.5
ENST00000489033.5
3UTR-3UTR TCA 90 bp AGGTACATAATGAGAAGCTGGGGGAGATGGAGCAATACAGCCAATTGGCCCAGGATGTGCCTTCAAAACTaGTATCACAGAATGCAACTG +
Preference number: 2 (lower is better)
Translates to: RYIMRSWGRWSNTANWPRMCLQN*YHRMQL
Trigger: CAGTTGCATTCTGTGATATCAGTTTTGAAGGCACAT...CCTGGGCCAATTGGCTGTATTGCTCCATCTCCCCCAGCTTCTCATTATGTACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000470971.5
ENST00000624161.3
ENST00000636363.1
3UTR-3UTR TCA 90 bp CTGTGGCACATAGACCATGGAGTGCCAGTAGCTGTGGTAATAGCACTGCAATCCATTTTCCCTCATATATaGGACACAAGCCTTCCTGAT +
Preference number: 2 (lower is better)
Translates to: LWHIDHGVPVAVVIALQSIFPHI*DTSLPD
Trigger: ATCAGGAAGGCTTGTGTCTCATATATGAGGGAAAAT...GGATTGCAGTGCTATTACCACAGCTACTGGCACTCCATGGTCTATGTGCCACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
3UTR-3UTR TCA 90 bp GTGGTGGTGGTTGTAAGTTTGAAGTCTCTCCCACATCAAGAGCAGGAGGAGGAGCCGCCAATTCTTCAATaGAGACTGTTACTGAATTGT +
Preference number: 2 (lower is better)
Translates to: VVVVVSLKSLPHQEQEEEPPILQ*RLLLNC
Trigger: ACAATTCAGTAACAGTCTTCATTGAAGAATTGGCGG...CTCCTCCTCCTGCTCTTGATGTGGGAGAGACTTCAAACTTACAACCACCACCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470971.5
ENST00000623148.3
3UTR-3UTR TCA 90 bp TGGGCATCCCATATCCCCGACCTTGTCTCGGAGATGGATGCTGAGGATGAAAATTCCCTCGAATTTTCTTaGACATCTTCTTCTGTTGCT +
Preference number: 2 (lower is better)
Translates to: WASHIPDLVSEMDAEDENSLEFS*TSSSVA
Trigger: AGCAACAGAAGAAGATGTTCAAGAAAATTCGAGGGA...ATTTTCATCCTCAGCATCCATCTCCGAGACAAGGTCGGGGATATGGGATGCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
3UTR-3UTR GCA 90 bp GTGGTGGTGGTTGTAAGTTTGAAGTCTCTCCCACATCAAGAGCAGGAGGAGGAGGAAACAGCCCTAAGCTaGCTAAATATTCATCCATTG +
Preference number: 2 (lower is better)
Translates to: VVVVVSLKSLPHQEQEEEETALS*LNIHPL
Trigger: CAATGGATGAATATTTAGGCAGCTTAGGGCTGTTTC...CTCCTCCTCCTGCTCTTGATGTGGGAGAGACTTCAAACTTACAACCACCACCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623148.3
3UTR-3UTR CCA 90 bp GTTTCTTCCAAGCCCCTGGGCATCTGTCCATTCCCTGGGGTAAATCCATACTGGATCACAGAATGCAACTaGCTTCAGATAATTCTCAAG +
Preference number: 2 (lower is better)
Translates to: VSSKPLGICPFPGVNPYWITECN*LQIILK
Trigger: CTTGAGAATTATCTGAAGCCAGTTGCATTCTGTGAT...CCAGTATGGATTTACCCCAGGGAATGGACAGATGCCCAGGGGCTTGGAAGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000470971.5
ENST00000624161.3
ENST00000636363.1
3UTR-3UTR CCA 90 bp AGTCTAGGCCTGAAAAGGCAGTTGAAGTCAGCGCTGCAGAATCTTGGCACTTCCTATAACCACTACGAGTaGCTTTCCTTTTTCCAGAGT +
Preference number: 2 (lower is better)
Translates to: SLGLKRQLKSALQNLGTSYNHYE*LSFFQS
Trigger: ACTCTGGAAAAAGGAAAGCCACTCGTAGTGGTTATA...GGAAGTGCCAAGATTCTGCAGCGCTGACTTCAACTGCCTTTTCAGGCCTAGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000471924.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
3UTR-3UTR TCA 90 bp ATAGCATTCCAGGCAGGAACAGACATCACTTGGGTAACTGGTTTTAAGTTAGCCTCGTACAATACAGCCTaGCAAACAGCTGCACTTGAC +
Preference number: 2 (lower is better)
Translates to: IAFQAGTDITWVTGFKLASYNTA*QTAALD
Trigger: GTCAAGTGCAGCTGTTTGTCAGGCTGTATTGTACGA...GGCTAACTTAAAACCAGTTACCCAAGTGATGTCTGTTCCTGCCTGGAATGCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
3UTR-3UTR TCA 90 bp CACTGTAGCATTGAGGAACGGTTTGATCTACCAGAGGTGGCTCAGTATAGACTGGTTTATAAACCGAGATaGATTCCTGGGCATCCCATA +
Preference number: 2 (lower is better)
Translates to: HCSIEERFDLPEVAQYRLVYKPR*IPGHPI
Trigger: TATGGGATGCCCAGGAATTCATCTCGGTTTATAAAC...CAGTCTATACTGAGCCACCTCTGGTAGATCAAACCGTTCCTCAATGCTACAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
3UTR-3UTR TCA 90 bp TCACCTCACTGTAGCATTGAGGAACGGTTTGATCTACCAGAGGTGGCTCAGTATGTTTATAAACCGAGATaGATTCCTGGGCATCCCATA +
Preference number: 2 (lower is better)
Translates to: SPHCSIEERFDLPEVAQYVYKPR*IPGHPI
Trigger: TATGGGATGCCCAGGAATTCATCTCGGTTTATAAAC...ATACTGAGCCACCTCTGGTAGATCAAACCGTTCCTCAATGCTACAGTGAGGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
3UTR-3UTR TCA 90 bp CTGCTCCATGAGGGACAGATGAAGAATCAGCATTCGGAAAAGTATCATTTGCTGCAACTCATCTGGCGGTaGCTACGTCTAAATGAACGA +
Preference number: 2 (lower is better)
Translates to: LLHEGQMKNQHSEKYHLLQLIWR*LRLNER
Trigger: TCGTTCATTTAGACGTAGTCACCGCCAGATGAGTTG...CAGCAAATGATACTTTTCCGAATGCTGATTCTTCATCTGTCCCTCATGGAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
3UTR-3UTR GCA 90 bp GTGAGTAGTGCATTGGAGGATCGTGCCCATAATGCATACTGTGCTGCAGCCTGGACTGATATCACAGAATaGAACTGGCTTCAGATAATT +
Preference number: 2 (lower is better)
Translates to: VSSALEDRAHNAYCAAAWTDITE*NWLQII
Trigger: AATTATCTGAAGCCAGTTGCATTCTGTGATATCAGT...CCAGGCTGCAGCACAGTATGCATTATGGGCACGATCCTCCAATGCACTACTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000470971.5
ENST00000624161.3
ENST00000636363.1
3UTR-3UTR GCA 90 bp TATAGCACCATGAATTTGAGAAGAACCACCATATGCTGTACCAACTGGATGCCAACAAGGGCTTGCTTATaGAGGTATCCGGAAAGCAGC +
Preference number: 2 (lower is better)
Translates to: YSTMNLRRTTICCTNWMPTRACL*RYPESS
Trigger: GCTGCTTTCCGGATACCTGCATAAGCAAGCCCTTGT...TGGCATCCAGTTGGTACAGCATATGGTGGTTCTTCTCAAATTCATGGTGCTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
3UTR-3UTR GCA 90 bp CTATTTCCGGGACATAACCCCCAGGCATTTTCTGGTAACCTCTTCCTTTCCGACGAAACAGCCCTAAGCTaGCTAAATATTCATCCATTG +
Preference number: 2 (lower is better)
Translates to: LFPGHNPQAFSGNLFLSDETALS*LNIHPL
Trigger: CAATGGATGAATATTTAGGCAGCTTAGGGCTGTTTC...GTCGGAAAGGAAGAGGTTACCAGAAAATGCCTGGGGGTTATGTCCCGGAAATAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
3UTR-3UTR GCA 90 bp AAAGCAGAGAACCATGTGCCTTCAAAACTGATATCACAGAATGCAACTGGCTTCGGGCCCGGCATGTTGTaGCTGTTTATAAACCGAGAT +
Preference number: 2 (lower is better)
Translates to: KAENHVPSKLISQNATGFGPGML*LFINRD
Trigger: ATCTCGGTTTATAAACAGGCACAACATGCCGGGCCC...GAAGCCAGTTGCATTCTGTGATATCAGTTTTGAAGGCACATGGTTCTCTGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000470971.5
ENST00000624161.3
ENST00000636363.1
3UTR-3UTR GCA 90 bp GTGGTGGTGGTTGTAAGTTTGAAGTCTCTCCCACATCAAGAGCAGGAGGAGGAGAAGAATACTTCATACTaGTGGATCTTACATACCCTG +
Preference number: 2 (lower is better)
Translates to: VVVVVSLKSLPHQEQEEEKNTSY*WILHTL
Trigger: CAGGGTATGTAAGATCCAGCAGTATGAAGTATTCTT...CTCCTCCTCCTGCTCTTGATGTGGGAGAGACTTCAAACTTACAACCACCACCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470971.5
ENST00000623148.3
3UTR-3UTR CCA 90 bp GTCTGGCTCTGCACGATAAAGATATTCTTCATGATATCGCCCATTTTCACTCTGCAGAAGCAATGGACTTaGCTTGCCCAGGACAAGTCA +
Preference number: 2 (lower is better)
Translates to: VWLCTIKIFFMISPIFTLQKQWT*LAQDKS
Trigger: TGACTTGTCCTGGGCAAGCCAAGTCCATTGCTTCTG...CAGAGTGAAAATGGGCGATATCATGAAGAATATCTTTATCGTGCAGAGCCAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
3UTR-3UTR CCA 90 bp GTCTGGCTCTGCACGATAAAGATATTCTTCATGATATCGCCCATTTTCACTCTGGGCAAGAGGCATCCTTaGCAGTCAGCTTTCGAAACA +
Preference number: 2 (lower is better)
Translates to: VWLCTIKIFFMISPIFTLGKRHP*QSAFET
Trigger: TGTTTCGAAAGCTGACTGCCAAGGATGCCTCTTGCC...CAGAGTGAAAATGGGCGATATCATGAAGAATATCTTTATCGTGCAGAGCCAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
3UTR-3UTR TCA 90 bp CAAGTTGGCTTCCTCCTGCTACCCAGAGTATTTCTTTGTCACCACCTTCTACCAGATTCCAATTCCACTTaGGATTCTAGGAGAAAACCT +
Preference number: 2 (lower is better)
Translates to: QVGFLLLPRVFLCHHLLPDSNST*DSRRKP
Trigger: AGGTTTTCTCCTAGAATCTCAAGTGGAATTGGAATC...TGGTAGAAGGTGGTGACAAAGAAATACTCTGGGTAGCAGGAGGAAGCCAACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371979.7
3UTR-3UTR TCA 90 bp CCCATATCCCCGACCTTGTCTCGGAGATGGATGCTGAGGATGAAAATGTTCATTATTTTCCCTCATATATaGGACACAAGCCTTCCTGAT +
Preference number: 2 (lower is better)
Translates to: PISPTLSRRWMLRMKMFIIFPHI*DTSLPD
Trigger: ATCAGGAAGGCTTGTGTCTCATATATGAGGGAAAAT...AATGAACATTTTCATCCTCAGCATCCATCTCCGAGACAAGGTCGGGGATATGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
3UTR-3UTR TCA 90 bp AGTCAAAACCTGGCAAAGGTGGCTGCCCATAGGGATCTGACATTACTGGATAATCATGACTTTCTGTCCTaGAGAGACAAGTTTGCTGTA +
Preference number: 2 (lower is better)
Translates to: SQNLAKVAAHRDLTLLDNHDFLS*RDKFAV
Trigger: TACAGCAAACTTGTCTCTTCAGGACAGAAAGTCATG...ATTATCCAGTAATGTCAGATCCCTATGGGCAGCCACCTTTGCCAGGTTTTGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
3UTR-3UTR GCA 90 bp CCAAGTTGGCTTCCTCCTGCTACCCAGAGTATTTCTTTGTCACCACCTTCTACCAGGATTTGGACCCAATaGAAATGTGCACAACATAAA +
Preference number: 2 (lower is better)
Translates to: PSWLPPATQSISLSPPSTRIWTQ*KCAQHK
Trigger: TTTATGTTGTGCACATTTGCATTGGGTCCAAATCCT...GGTAGAAGGTGGTGACAAAGAAATACTCTGGGTAGCAGGAGGAAGCCAACTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371979.7
3UTR-3UTR GCA 90 bp AGCTGCCTAAATATTCATCCATTGATGCCTCATTCAAAGACTTCTGGCTGCAGTGCAGTAACAAGGGCTTaGTTATGCAGGTATCCGGAA +
Preference number: 2 (lower is better)
Translates to: SCLNIHPLMPHSKTSGCSAVTRA*LCRYPE
Trigger: TTCCGGATACCTGCATAAGCAAGCCCTTGTTACTGC...ACTGCAGCCAGAAGTCTTTGAATGAGGCATCAATGGATGAATATTTAGGCAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000486353.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
3UTR-3UTR GCA 90 bp AGTCAAAACCTGGCAAAGGTGGCTGCCCATAGGGATCTGACATTACTGGATAATGGAAGCTGCAACTGCTaGAATATTTCCCATCATCTT +
Preference number: 2 (lower is better)
Translates to: SQNLAKVAAHRDLTLLDNGSCNC*NISHHL
Trigger: AAGATGATGGGAAATATTGCAGCAGTTGCAGCTTCC...ATTATCCAGTAATGTCAGATCCCTATGGGCAGCCACCTTTGCCAGGTTTTGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
3UTR-3UTR CCA 90 bp CACTGTAGCATTGAGGAACGGTTTGATCTACCAGAGGTGGCTCAGTATAGACTGTATAAAGCTGACAAATaGCTGACAGGAAAACAGCTG +
Preference number: 2 (lower is better)
Translates to: HCSIEERFDLPEVAQYRLYKADK*LTGKQL
Trigger: CAGCTGTTTTCCTGTCAGCCATTTGTCAGCTTTATA...CAGTCTATACTGAGCCACCTCTGGTAGATCAAACCGTTCCTCAATGCTACAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000470971.5
ENST00000623144.3
ENST00000624161.3
ENST00000636363.1
3UTR-3UTR CCA 90 bp GGCTTCCTCCTGCTACCCAGAGTATTTCTTTGTCACCACCTTCTACCACTAGTAACTGCAATTAGGATTTaGACCCAATGCAAATGTGCA +
Preference number: 2 (lower is better)
Translates to: GFLLLPRVFLCHHLLPLVTAIRI*TQCKCA
Trigger: TGCACATTTGCATTGGGTCCAAATCCTAATTGCAGT...TACTAGTGGTAGAAGGTGGTGACAAAGAAATACTCTGGGTAGCAGGAGGAAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371979.7
3UTR-3UTR CCA 90 bp ACTGATATCACAGAATGCAACTGGCTTCAGATAATTCTCAAGAAACGTGAAGAGTTTCTTCCAAGCCCCTaGGCATCTGTCCATTCCCTG +
Preference number: 2 (lower is better)
Translates to: TDITECNWLQIILKKREEFLPSP*ASVHSL
Trigger: CAGGGAATGGACAGATGCCCAGGGGCTTGGAAGAAA...CTCTTCACGTTTCTTGAGAATTATCTGAAGCCAGTTGCATTCTGTGATATCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000470971.5
ENST00000624161.3
ENST00000636363.1
3UTR-3UTR TCA 90 bp TCCACAAAAGGGAAGTCAGAGGCGTTACTGCACACAATTGACAACAACGGCTTATTCTCTCCCTGGATTTaGATAGGACCTTTCCTAAAA +
Preference number: 2 (lower is better)
Translates to: STKGKSEALLHTIDNNGLFSPWI*IGPFLK
Trigger: TTTTAGGAAAGGTCCTATTCAAATCCAGGGAGAGAA...TAAGCCGTTGTTGTCAATTGTGTGCAGTAACGCCTCTGACTTCCCTTTTGTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371979.7
3UTR-3UTR TCA 90 bp CACTGTAGCATTGAGGAACGGTTTGATCTACCAGAGGTGGCTCAGTATAGACTGATAATATCTTCCTTCTaGTTCCAAGCAAACCTGACA +
Preference number: 2 (lower is better)
Translates to: HCSIEERFDLPEVAQYRLIISSF*FQANLT
Trigger: TGTCAGGTTTGCTTGGAATCAGAAGGAAGATATTAT...CAGTCTATACTGAGCCACCTCTGGTAGATCAAACCGTTCCTCAATGCTACAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
3UTR-3UTR TCA 90 bp CTGCTCCATGAGGGACAGATGAAGAATCAGCATTCGGAAAAGTATCATTTGCTGCATGACTTTCTGTCCTaGAGAGACAAGTTTGCTGTA +
Preference number: 2 (lower is better)
Translates to: LLHEGQMKNQHSEKYHLLHDFLS*RDKFAV
Trigger: TACAGCAAACTTGTCTCTTCAGGACAGAAAGTCATG...CAGCAAATGATACTTTTCCGAATGCTGATTCTTCATCTGTCCCTCATGGAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
3UTR-3UTR GCA 90 bp AGTTTCATAGTCTGGCTCTGCACGATAAAGATATTCTTCATGATATCGCCCATTACAAGGGCTTGCTTATaGAGGTATCCGGAAAGCAGC +
Preference number: 2 (lower is better)
Translates to: SFIVWLCTIKIFFMISPITRACL*RYPESS
Trigger: GCTGCTTTCCGGATACCTGCATAAGCAAGCCCTTGT...AATGGGCGATATCATGAAGAATATCTTTATCGTGCAGAGCCAGACTATGAAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
3UTR-3UTR GCA 90 bp AGTCAAAACCTGGCAAAGGTGGCTGCCCATAGGGATCTGACATTACTGGATAATCAAGTTTGCTGTAGATaGAGTTGTGCTATAAACACC +
Preference number: 2 (lower is better)
Translates to: SQNLAKVAAHRDLTLLDNQVCCR*SCAINT
Trigger: GGTGTTTATAGCACAACTGCATCTACAGCAAACTTG...ATTATCCAGTAATGTCAGATCCCTATGGGCAGCCACCTTTGCCAGGTTTTGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
3UTR-3UTR CCA 90 bp ATCCTCGCTTCCAGTTACAGCATTATTTCTGTTCTTCTTAGAACCACTTCGAAAGCTCTTATTTCCAGCTaGCCAGCACTTTCCTTGGGA +
Preference number: 2 (lower is better)
Translates to: ILASSYSIISVLLRTTSKALISS*PALSLG
Trigger: TCCCAAGGAAAGTGCTGGCCAGCTGGAAATAAGAGC...TTTCGAAGTGGTTCTAAGAAGAACAGAAATAATGCTGTAACTGGAAGCGAGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
3UTR-3UTR CCA 90 bp GATCTGACATTACTGGATAATAGACTGCTCCATGAGGGACAGATGAAGAATCAGACCTTGTCTCGGAGATaGATGCTGAGGATGAAAATG +
Preference number: 2 (lower is better)
Translates to: DLTLLDNRLLHEGQMKNQTLSRR*MLRMKM
Trigger: CATTTTCATCCTCAGCATCCATCTCCGAGACAAGGT...CTGATTCTTCATCTGTCCCTCATGGAGCAGTCTATTATCCAGTAATGTCAGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
3UTR-3UTR CCA 90 bp CTCTGCACGATAAAGATATTCTTCATGATATCGCCCATTTTCACTCTGGCCATTGCAGCACCTTTTACCTaGGCCTGGGTAAAAATCAAC +
Preference number: 2 (lower is better)
Translates to: LCTIKIFFMISPIFTLAIAAPFT*AWVKIN
Trigger: GTTGATTTTTACCCAGGCCCAGGTAAAAGGTGCTGC...AATGGCCAGAGTGAAAATGGGCGATATCATGAAGAATATCTTTATCGTGCAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
3UTR-3UTR CCA 90 bp CTCTGCACGATAAAGATATTCTTCATGATATCGCCCATTTTCACTCTGGCCATTCATCTGTCCATTCCCTaGGGTAAATCCATACTGGGA +
Preference number: 2 (lower is better)
Translates to: LCTIKIFFMISPIFTLAIHLSIP*GKSILG
Trigger: TCCCAGTATGGATTTACCCCAGGGAATGGACAGATG...AATGGCCAGAGTGAAAATGGGCGATATCATGAAGAATATCTTTATCGTGCAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
3UTR-3UTR TCA 90 bp AGGTACAATAGAAGAGATGACCCTCTTTGTGTAGCTGCTTTGCCAGTTCCAGCTTCACATTACATAGGTTaGATTTGGGGGTTGCTTTTA +
Preference number: 2 (lower is better)
Translates to: RYNRRDDPLCVAALPVPASHYIG*IWGLLL
Trigger: TAAAAGCAACCCCCAAATTCAACCTATGTAATGTGA...AGCTGGAACTGGCAAAGCAGCTACACAAAGAGGGTCATCTCTTCTATTGTACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000468657.5
ENST00000482374.5
ENST00000489033.5
ENST00000492038.5
3UTR-3UTR TCA 90 bp AAAGGGAAGTCAGAGGCGTTACTGCACACAATTGACAACAACGGCTTAAACCTCATGATTATGGTGCTGTaGATTCTCAACCAGATTACT +
Preference number: 2 (lower is better)
Translates to: KGKSEALLHTIDNNGLNLMIMVL*ILNQIT
Trigger: AGTAATCTGGTTGAGAATTCACAGCACCATAATCAT...GAGGTTTAAGCCGTTGTTGTCAATTGTGTGCAGTAACGCCTCTGACTTCCCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371979.7
3UTR-3UTR TCA 90 bp CTGCTCCATGAGGGACAGATGAAGAATCAGCATTCGGAAAAGTATCATTTGCTGCATAGCCATTATCTGTaGCATAAGTTGGAGGTTTTC +
Preference number: 2 (lower is better)
Translates to: LLHEGQMKNQHSEKYHLLHSHYL*HKLEVF
Trigger: GAAAACCTCCAACTTATGTCACAGATAATGGCTATG...CAGCAAATGATACTTTTCCGAATGCTGATTCTTCATCTGTCCCTCATGGAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
3UTR-3UTR TCA 90 bp ACTGATATCACAGAATGCAACTGGCTTCAGATAATTCTCAAGAAACGTGAAGAGTCGTACAATACAGCCTaGCAAACAGCTGCACTTGAC +
Preference number: 2 (lower is better)
Translates to: TDITECNWLQIILKKREESYNTA*QTAALD
Trigger: GTCAAGTGCAGCTGTTTGTCAGGCTGTATTGTACGA...CTCTTCACGTTTCTTGAGAATTATCTGAAGCCAGTTGCATTCTGTGATATCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000624161.3
ENST00000636363.1
3UTR-3UTR TCA 90 bp TTCCAGGCAGGAACAGACATCACTTGGGTAACTGGTTTTAAGTTAGCCAGTGGAATAATATCTTCCTTCTaGTTCCAAGCAAACCTGACA +
Preference number: 2 (lower is better)
Translates to: FQAGTDITWVTGFKLASGIISSF*FQANLT
Trigger: TGTCAGGTTTGCTTGGAATCAGAAGGAAGATATTAT...TCCACTGGCTAACTTAAAACCAGTTACCCAAGTGATGTCTGTTCCTGCCTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
3UTR-3UTR TCA 90 bp GATAAATCTAAAGCAGAGAACCATGTGCCTTCAAAACTGATATCACAGAATGCAATTGCCAGCTGTCTGTaGGTAGTGCATTGGAGGATC +
Preference number: 2 (lower is better)
Translates to: DKSKAENHVPSKLISQNAIASCL*VVHWRI
Trigger: GATCCTCCAATGCACTACTCACAGACAGCTGGCAAT...TGCATTCTGTGATATCAGTTTTGAAGGCACATGGTTCTCTGCTTTAGATTTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000470971.5
ENST00000624161.3
ENST00000636363.1
3UTR-3UTR GCA 90 bp CATCAACTTTTCGTTTATAACCACTACGAGTGGCTTTCCTTTTTCCAGAGTCTCACAGCTTCCTGCACCTaGGTGACTAATAACAAGATC +
Preference number: 2 (lower is better)
Translates to: HQLFVYNHYEWLSFFQSLTASCT*VTNNKI
Trigger: GATCTTGTTATTAGTCACGCAGGTGCAGGAAGCTGT...GAGACTCTGGAAAAAGGAAAGCCACTCGTAGTGGTTATAAACGAAAAGTTGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000468657.5
ENST00000471924.5
ENST00000482374.5
ENST00000495283.5
ENST00000622997.3
ENST00000623144.3
3UTR-3UTR CCA 90 bp GCAGAGAACCATGTGCCTTCAAAACTGATATCACAGAATGCAACTGGCTTCAGATATAAAGCTGACAAATaGCTGACAGGAAAACAGCTG +
Preference number: 2 (lower is better)
Translates to: AENHVPSKLISQNATGFRYKADK*LTGKQL
Trigger: CAGCTGTTTTCCTGTCAGCCATTTGTCAGCTTTATA...TCTGAAGCCAGTTGCATTCTGTGATATCAGTTTTGAAGGCACATGGTTCTCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000251943.8
ENST00000394780.8
ENST00000436609.5
ENST00000470971.5
ENST00000610588.4
ENST00000621367.4
ENST00000624161.3
ENST00000636363.1
3UTR CAA 90 bp CGTACAATACAGCCTGACAAACAGCTGCACTTGACTGAAATTGTTTaGAGTACACAGAATCATAGTGACCACTACTTGAGTAGCAGAGTA +
Preference number: 2 (lower is better)
Translates to: RTIQPDKQLHLTEIV*STQNHSDHYLSSRV
Trigger: TACTCTGCTACTCAAGTAGTGGTCACTATGATTCTGTGTACTCAAAACAATTTCAGTCAAGTGCAGCTGTTTGTCAGGCTGTATTGTACG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
3UTR-3UTR TCA 90 bp TACAATAGAAGAGATGACCCTCTTTGTGTAGCTGCTTTGCCAGTTCCAGCTGATTCACATTACATAGGTTaGATTTGGGGGTTGCTTTTA +
Preference number: 2 (lower is better)
Translates to: YNRRDDPLCVAALPVPADSHYIG*IWGLLL
Trigger: TAAAAGCAACCCCCAAATTCAACCTATGTAATGTGA...ATCAGCTGGAACTGGCAAAGCAGCTACACAAAGAGGGTCATCTCTTCTATTGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000468657.5
ENST00000482374.5
ENST00000489033.5
ENST00000492038.5
3UTR-3UTR TCA 90 bp CTCTGCACGATAAAGATATTCTTCATGATATCGCCCATTTTCACTCTGGCCATTGTTTATAAACCGAGATaGATTCCTGGGCATCCCATA +
Preference number: 2 (lower is better)
Translates to: LCTIKIFFMISPIFTLAIVYKPR*IPGHPI
Trigger: TATGGGATGCCCAGGAATTCATCTCGGTTTATAAAC...AATGGCCAGAGTGAAAATGGGCGATATCATGAAGAATATCTTTATCGTGCAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
3UTR-3UTR TCA 90 bp AGAAAATGGCAGTGCAAGAATACTTCATACTGCTGGATCTTACATACCCTGAGGAAAACTTTTGTATCTTaGGGCAAATCACTGCCGCTT +
Preference number: 2 (lower is better)
Translates to: RKWQCKNTSYCWILHTLRKTFVS*GKSLPL
Trigger: AAGCGGCAGTGATTTGCCTCAAGATACAAAAGTTTT...CCTCAGGGTATGTAAGATCCAGCAGTATGAAGTATTCTTGCACTGCCATTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000470971.5
ENST00000623148.3
3UTR-3UTR TCA 90 bp CTGCTTACAGCCCAGTACCCCTCTCTTCAGTTTAACGACTATTTTATAAGAGAAGCTAAAGCAGACAACTaGACTATGTCATCTTCAGAG +
Preference number: 2 (lower is better)
Translates to: LLTAQYPSLQFNDYFIREAKADN*TMSSSE
Trigger: CTCTGAAGATGACATAGTTCAGTTGTCTGCTTTAGC...TTCTCTTATAAAATAGTCGTTAAACTGAAGAGAGGGGTACTGGGCTGTAAGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474121.1
3UTR-3UTR CCA 90 bp GTATTAAACAATAGCATATGGGATAAATCTAAAGCAGAGAACCATGTGCCTTCAAGAAGCTGGGGGAGATaGAGCAATACAGCCAATTGG +
Preference number: 2 (lower is better)
Translates to: VLNNSIWDKSKAENHVPSRSWGR*SNTANW
Trigger: CCAATTGGCTGTATTGCTCCATCTCCCCCAGCTTCT...TGAAGGCACATGGTTCTCTGCTTTAGATTTATCCCATATGCTATTGTTTAATAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000470971.5
ENST00000624161.3
ENST00000636363.1
3UTR-3UTR TCA 90 bp GTTCTTTTCTGCTGTCCAACCAAACATCAAATTCTACATTACGATAGATTTCTGCTTCCTGCACCTGCGTaGCTAATAACAAGATCTGCT +
Preference number: 2 (lower is better)
Translates to: VLFCCPTKHQILHYDRFLLPAPA*LITRSA
Trigger: AGCAGATCTTGTTATTAGTCACGCAGGTGCAGGAAG...CAGAAATCTATCGTAATGTAGAATTTGATGTTTGGTTGGACAGCAGAAAAGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495283.5
ENST00000623144.3
3UTR-3UTR TCA 90 bp AGAGAACCATGTGCCTTCAAAACTGATATCACAGAATGCAACTGGCTTCAGATAAAAACTTTTGTATCTTaGGGCAAATCACTGCCGCTT +
Preference number: 2 (lower is better)
Translates to: REPCAFKTDITECNWLQIKTFVS*GKSLPL
Trigger: AAGCGGCAGTGATTTGCCTCAAGATACAAAAGTTTT...TATCTGAAGCCAGTTGCATTCTGTGATATCAGTTTTGAAGGCACATGGTTCTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000470971.5
3UTR-3UTR CCA 90 bp TCCTCGCTTCCAGTTACAGCATTATTTCTGTTCTTCTTAGAACCACTTCGAAACTATAACCACTACGAGTaGCTTTCCTTTTTCCAGAGT +
Preference number: 2 (lower is better)
Translates to: SSLPVTALFLFFLEPLRNYNHYE*LSFFQS
Trigger: ACTCTGGAAAAAGGAAAGCCACTCGTAGTGGTTATA...GTTTCGAAGTGGTTCTAAGAAGAACAGAAATAATGCTGTAACTGGAAGCGAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
3UTR-3UTR CCA 90 bp ATCCTCGCTTCCAGTTACAGCATTATTTCTGTTCTTCTTAGAACCACTTCGAAAATCTGTGACATAAGTTaGAGGTTTTCCAGGAAAGCG +
Preference number: 2 (lower is better)
Translates to: ILASSYSIISVLLRTTSKICDIS*RFSRKA
Trigger: CGCTTTCCTGGAAAACCTCCAACTTATGTCACAGAT...TTTCGAAGTGGTTCTAAGAAGAACAGAAATAATGCTGTAACTGGAAGCGAGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
3UTR-3UTR CCA 90 bp TCTCGGAGATGGATGCTGAGGATGAAAATGTTCATTAGACATAACATTGCCAGCGGAACAGACATCACTTaGGTAACTGGTTTTAAGTTA +
Preference number: 2 (lower is better)
Translates to: SRRWMLRMKMFIRHNIASGTDIT*VTGFKL
Trigger: TAACTTAAAACCAGTTACCCAAGTGATGTCTGTTCC...GCTGGCAATGTTATGTCTAATGAACATTTTCATCCTCAGCATCCATCTCCGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
3UTR-3UTR CCA 90 bp GTATTAAACAATAGCATATGGGATAAATCTAAAGCAGAGAACCATGTGCCTTCACAAAACTTTTGTATCTaGCCTGCCGTGTGTAGGTGG +
Preference number: 2 (lower is better)
Translates to: VLNNSIWDKSKAENHVPSQNFCI*PAVCRW
Trigger: CCACCTACACACGGCAGGCCAGATACAAAAGTTTTG...TGAAGGCACATGGTTCTCTGCTTTAGATTTATCCCATATGCTATTGTTTAATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000624161.3
ENST00000636363.1
3UTR-3UTR TCA 90 bp ACTGATATCACAGAATGCAACTGGCTTCAGATAATTCTCAAGAAACGTGAAGAGATGTGCCTTCAAAACTaGTATCACAGAATGCAACTG +
Preference number: 2 (lower is better)
Translates to: TDITECNWLQIILKKREEMCLQN*YHRMQL
Trigger: CAGTTGCATTCTGTGATATCAGTTTTGAAGGCACAT...CTCTTCACGTTTCTTGAGAATTATCTGAAGCCAGTTGCATTCTGTGATATCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000251943.8
ENST00000394780.8
ENST00000436609.5
ENST00000470971.5
ENST00000610588.4
ENST00000621367.4
ENST00000623310.1
ENST00000624161.3
ENST00000636363.1
3UTR-3UTR TCA 90 bp ACAGGAAAACAGCTGAATACAATGAAGTATGCTCAATATGGGGCTAGTTGTACAATGTGCCTTCAAAACTaGTATCACAGAATGCAACTG +
Preference number: 2 (lower is better)
Translates to: TGKQLNTMKYAQYGASCTMCLQN*YHRMQL
Trigger: CAGTTGCATTCTGTGATATCAGTTTTGAAGGCACAT...TGTACAACTAGCCCCATATTGAGCATACTTCATTGTATTCAGCTGTTTTCCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000251943.8
ENST00000394780.8
ENST00000436609.5
ENST00000470971.5
ENST00000610588.4
ENST00000621367.4
ENST00000624161.3
ENST00000636363.1
3UTR-3UTR TCA 90 bp CATCAACTTTTCGTTTATAACCACTACGAGTGGCTTTCCTTTTTCCAGAGTCTCTCACATTACATAGGTTaGATTTGGGGGTTGCTTTTA +
Preference number: 2 (lower is better)
Translates to: HQLFVYNHYEWLSFFQSLSHYIG*IWGLLL
Trigger: TAAAAGCAACCCCCAAATTCAACCTATGTAATGTGA...GAGACTCTGGAAAAAGGAAAGCCACTCGTAGTGGTTATAAACGAAAAGTTGATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000468657.5
ENST00000482374.5
ENST00000489033.5
ENST00000492038.5
3UTR-3UTR TCA 90 bp ACAGGAAAACAGCTGAATACAATGAAGTATGCTCAATATGGGGCTAGTTGTACAACAGCTGCACTTGACTaGAATTGTTTTGAGTACACA +
Preference number: 2 (lower is better)
Translates to: TGKQLNTMKYAQYGASCTTAALD*NCFEYT
Trigger: TGTGTACTCAAAACAATTTCAGTCAAGTGCAGCTGT...TGTACAACTAGCCCCATATTGAGCATACTTCATTGTATTCAGCTGTTTTCCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000623144.3
ENST00000624161.3
ENST00000636363.1
3UTR-3UTR TCA 90 bp ATTGTGCTGCTTACAGCCCAGTACCCCTCTCTTCAGTTTAACGACTATTTTATACGAAGTTCAAGAGTCTaGTTATCAAAACGGTCTATA +
Preference number: 2 (lower is better)
Translates to: IVLLTAQYPSLQFNDYFIRSSRV*LSKRSI
Trigger: TATAGACCGTTTTGATAATCAGACTCTTGAACTTCG...TATAAAATAGTCGTTAAACTGAAGAGAGGGGTACTGGGCTGTAAGCAGCACAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000474121.1
3UTR-3UTR GCA 90 bp GATAAATCTAAAGCAGAGAACCATGTGCCTTCAAAACTGATATCACAGAATGCATTTCACTCTGGCCATTaGCCTCCTCTAAATTCAAAG +
Preference number: 2 (lower is better)
Translates to: DKSKAENHVPSKLISQNAFHSGH*PPLNSK
Trigger: CTTTGAATTTAGAGGAGGGCAATGGCCAGAGTGAAA...TGCATTCTGTGATATCAGTTTTGAAGGCACATGGTTCTCTGCTTTAGATTTATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000470971.5
ENST00000624161.3
ENST00000636363.1
3UTR-3UTR GCA 90 bp ACTGTGCAAAAGACACCAATTCAATACAGTGCAGTAAAACACTTACATACATCCGATCCCTCCACATACTaGAGGTACAATAGAAGAGAT +
Preference number: 2 (lower is better)
Translates to: TVQKTPIQYSAVKHLHTSDPSTY*RYNRRD
Trigger: ATCTCTTCTATTGTACCTGCAGTATGTGGAGGGATC...GGATGTATGTAAGTGTTTTACTGCACTGTATTGAATTGGTGTCTTTTGCACAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470971.5
3UTR-3UTR CCA 90 bp AGAGAACCATGTGCCTTCAAAACTGATATCACAGAATGCAACTGGCTTCAGATAATCACAGAATGCAACTaGCTTCAGATAATTCTCAAG +
Preference number: 2 (lower is better)
Translates to: REPCAFKTDITECNWLQIITECN*LQIILK
Trigger: CTTGAGAATTATCTGAAGCCAGTTGCATTCTGTGAT...TATCTGAAGCCAGTTGCATTCTGTGATATCAGTTTTGAAGGCACATGGTTCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000251943.8
ENST00000394780.8
ENST00000436609.5
ENST00000470971.5
ENST00000610588.4
ENST00000621367.4
ENST00000623310.1
ENST00000624161.3
ENST00000636363.1
3UTR-3UTR TCA 90 bp GTGCAAAAGACACCAATTCAATACAGTGCAGTAAAACACTTACATACATCCAGTATGTGCCTTCAAAACTaGTATCACAGAATGCAACTG +
Preference number: 2 (lower is better)
Translates to: VQKTPIQYSAVKHLHTSSMCLQN*YHRMQL
Trigger: CAGTTGCATTCTGTGATATCAGTTTTGAAGGCACAT...ACTGGATGTATGTAAGTGTTTTACTGCACTGTATTGAATTGGTGTCTTTTGCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000251943.8
ENST00000394780.8
ENST00000436609.5
ENST00000470971.5
ENST00000610588.4
ENST00000621367.4
ENST00000623310.1
ENST00000624161.3
3UTR-3UTR TCA 90 bp GATAAATCTAAAGCAGAGAACCATGTGCCTTCAAAACTGATATCACAGAATGCAATGTGCCTTCAAAACTaGTATCACAGAATGCAACTG +
Preference number: 2 (lower is better)
Translates to: DKSKAENHVPSKLISQNAMCLQN*YHRMQL
Trigger: CAGTTGCATTCTGTGATATCAGTTTTGAAGGCACAT...TGCATTCTGTGATATCAGTTTTGAAGGCACATGGTTCTCTGCTTTAGATTTATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000251943.8
ENST00000394780.8
ENST00000436609.5
ENST00000470971.5
ENST00000610588.4
ENST00000621367.4
ENST00000623310.1
ENST00000624161.3
ENST00000636363.1
3UTR-3UTR TCA 90 bp ATTGTTTTGAGTACACAGAATCATAGTGACCACTACTTGAGTAGCAGAGTAGAACATAGCCATTATCTGTaGCATAAGTTGGAGGTTTTC +
Preference number: 2 (lower is better)
Translates to: IVLSTQNHSDHYLSSRVEHSHYL*HKLEVF
Trigger: GAAAACCTCCAACTTATGTCACAGATAATGGCTATG...TTCTACTCTGCTACTCAAGTAGTGGTCACTATGATTCTGTGTACTCAAAACAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
3UTR-3UTR CCA 90 bp AGCATATGGGATAAATCTAAAGCAGAGAACCATGTGCCTTCAAAACTGATATCATATAAAGCTGACAAATaGCTGACAGGAAAACAGCTG +
Preference number: 2 (lower is better)
Translates to: SIWDKSKAENHVPSKLISYKADK*LTGKQL
Trigger: CAGCTGTTTTCCTGTCAGCCATTTGTCAGCTTTATA...TGATATCAGTTTTGAAGGCACATGGTTCTCTGCTTTAGATTTATCCCATATGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000251943.8
ENST00000394780.8
ENST00000436609.5
ENST00000470971.5
ENST00000610588.4
ENST00000621367.4
ENST00000624161.3
ENST00000636363.1
3UTR-3UTR CCA 90 bp GTGCAAAAGACACCAATTCAATACAGTGCAGTAAAACACTTACATACATCCAGTTATAAAGCTGACAAATaGCTGACAGGAAAACAGCTG +
Preference number: 2 (lower is better)
Translates to: VQKTPIQYSAVKHLHTSSYKADK*LTGKQL
Trigger: CAGCTGTTTTCCTGTCAGCCATTTGTCAGCTTTATA...ACTGGATGTATGTAAGTGTTTTACTGCACTGTATTGAATTGGTGTCTTTTGCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000251943.8
ENST00000394780.8
ENST00000436609.5
ENST00000470971.5
ENST00000610588.4
ENST00000621367.4
ENST00000624161.3
3UTR-3UTR CCA 90 bp GAATTTCGTACAATACAGCCTGACAAACAGCTGCACTTGACTGAAATTGTTTTGATCACAGAATGCAACTaGCTTCAGATAATTCTCAAG +
Preference number: 2 (lower is better)
Translates to: EFRTIQPDKQLHLTEIVLITECN*LQIILK
Trigger: CTTGAGAATTATCTGAAGCCAGTTGCATTCTGTGAT...CAAAACAATTTCAGTCAAGTGCAGCTGTTTGTCAGGCTGTATTGTACGAAATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000624161.3
ENST00000636363.1
3UTR-3UTR CCA 90 bp ACTGATATCACAGAATGCAACTGGCTTCAGATAATTCTCAAGAAACGTGAAGAGGGAACAGACATCACTTaGGTAACTGGTTTTAAGTTA +
Preference number: 2 (lower is better)
Translates to: TDITECNWLQIILKKREEGTDIT*VTGFKL
Trigger: TAACTTAAAACCAGTTACCCAAGTGATGTCTGTTCC...CTCTTCACGTTTCTTGAGAATTATCTGAAGCCAGTTGCATTCTGTGATATCAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000470971.5
ENST00000624161.3
ENST00000636363.1
3UTR-3UTR CCA 90 bp GTATTAAACAATAGCATATGGGATAAATCTAAAGCAGAGAACCATGTGCCTTCACCTTTTACCTGGGCCTaGGTAAAAATCAACTTTAGG +
Preference number: 2 (lower is better)
Translates to: VLNNSIWDKSKAENHVPSPFTWA*VKINFR
Trigger: CCTAAAGTTGATTTTTACCCAGGCCCAGGTAAAAGG...TGAAGGCACATGGTTCTCTGCTTTAGATTTATCCCATATGCTATTGTTTAATAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000470971.5
ENST00000624161.3
ENST00000636363.1
3UTR-3UTR TCA 90 bp GTTCTTTTCTGCTGTCCAACCAAACATCAAATTCTACATTACGATAGATTTCTGCATAGCCATTATCTGTaGCATAAGTTGGAGGTTTTC +
Preference number: 2 (lower is better)
Translates to: VLFCCPTKHQILHYDRFLHSHYL*HKLEVF
Trigger: GAAAACCTCCAACTTATGTCACAGATAATGGCTATG...CAGAAATCTATCGTAATGTAGAATTTGATGTTTGGTTGGACAGCAGAAAAGAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
3UTR-3UTR GCA 90 bp TCTAGTAATTTCACTAAACTGCAATTAGGATTTGGACCCAATGCAAATGTGCACGAGAAAACCTGTGAATaGTCACTACATACTGAAGAT +
Preference number: 2 (lower is better)
Translates to: SSNFTKLQLGFGPNANVHEKTCE*SLHTED
Trigger: ATCTTCAGTATGTAGTGAGCATTCACAGGTTTTCTC...GTGCACATTTGCATTGGGTCCAAATCCTAATTGCAGTTTAGTGAAATTACTAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371979.7
ENST00000468657.5
ENST00000492038.5
3UTR-3UTR CCA 90 bp CTAACTGTGCAAAAGACACCAATTCAATACAGTGCAGTAAAACACTTACATACATATAAAGCTGACAAATaGCTGACAGGAAAACAGCTG +
Preference number: 2 (lower is better)
Translates to: LTVQKTPIQYSAVKHLHTYKADK*LTGKQL
Trigger: CAGCTGTTTTCCTGTCAGCCATTTGTCAGCTTTATA...TGTATGTAAGTGTTTTACTGCACTGTATTGAATTGGTGTCTTTTGCACAGTTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000251943.8
ENST00000394780.8
ENST00000436609.5
ENST00000470971.5
ENST00000610588.4
ENST00000621367.4
ENST00000624161.3
3UTR-3UTR CCA 90 bp GATAAATCTAAAGCAGAGAACCATGTGCCTTCAAAACTGATATCACAGAATGCAATCACAGAATGCAACTaGCTTCAGATAATTCTCAAG +
Preference number: 2 (lower is better)
Translates to: DKSKAENHVPSKLISQNAITECN*LQIILK
Trigger: CTTGAGAATTATCTGAAGCCAGTTGCATTCTGTGAT...TGCATTCTGTGATATCAGTTTTGAAGGCACATGGTTCTCTGCTTTAGATTTATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000251943.8
ENST00000394780.8
ENST00000436609.5
ENST00000470971.5
ENST00000610588.4
ENST00000621367.4
ENST00000623310.1
ENST00000624161.3
ENST00000636363.1
3UTR-3UTR CCA 90 bp CTAACTGTGCAAAAGACACCAATTCAATACAGTGCAGTAAAACACTTACATACATATAACCACTACGAGTaGCTTTCCTTTTTCCAGAGT +
Preference number: 2 (lower is better)
Translates to: LTVQKTPIQYSAVKHLHTYNHYE*LSFFQS
Trigger: ACTCTGGAAAAAGGAAAGCCACTCGTAGTGGTTATA...TGTATGTAAGTGTTTTACTGCACTGTATTGAATTGGTGTCTTTTGCACAGTTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000470971.5
ENST00000624161.3
3UTR-3UTR TCA 90 bp ACTGCAATTAGGATTTGGACCCAATGCAAATGTGCACAACATAAAATTTCCTATTCACATTACATAGGTTaGATTTGGGGGTTGCTTTTA +
Preference number: 2 (lower is better)
Translates to: TAIRIWTQCKCAQHKISYSHYIG*IWGLLL
Trigger: TAAAAGCAACCCCCAAATTCAACCTATGTAATGTGA...ATAGGAAATTTTATGTTGTGCACATTTGCATTGGGTCCAAATCCTAATTGCAGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000371979.7
ENST00000468657.5
ENST00000489033.5
ENST00000492038.5
3UTR-3UTR GCA 90 bp ACTGTGCAAAAGACACCAATTCAATACAGTGCAGTAAAACACTTACATACATCCACTGATATCACAGAATaGAACTGGCTTCAGATAATT +
Preference number: 2 (lower is better)
Translates to: TVQKTPIQYSAVKHLHTSTDITE*NWLQII
Trigger: AATTATCTGAAGCCAGTTGCATTCTGTGATATCAGT...GGATGTATGTAAGTGTTTTACTGCACTGTATTGAATTGGTGTCTTTTGCACAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000251943.8
ENST00000394780.8
ENST00000436609.5
ENST00000470971.5
ENST00000610588.4
ENST00000621367.4
ENST00000623310.1
ENST00000624161.3
3UTR-3UTR GCA 90 bp GTGCAAAAGACACCAATTCAATACAGTGCAGTAAAACACTTACATACATCCAGTACTGATATCACAGAATaGAACTGGCTTCAGATAATT +
Preference number: 2 (lower is better)
Translates to: VQKTPIQYSAVKHLHTSSTDITE*NWLQII
Trigger: AATTATCTGAAGCCAGTTGCATTCTGTGATATCAGT...ACTGGATGTATGTAAGTGTTTTACTGCACTGTATTGAATTGGTGTCTTTTGCAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000251943.8
ENST00000394780.8
ENST00000436609.5
ENST00000470971.5
ENST00000610588.4
ENST00000621367.4
ENST00000623310.1
ENST00000624161.3
3UTR CCA 72 bp GAGGATCGTGCCCATAATGCATACTGTGCTGCAGCCTaGGTGGGAGGAGGGGGTCTCCCTTGCCGTAAGCCA +
Preference number: 3 (lower is better)
Translates to: EDRAHNAYCAAA*VGGGGLPCRKP
Trigger: TGGCTTACGGCAAGGGAGACCCCCTCCTCCCACCCAGGCTGCAGCACAGTATGCATTATGGGCACGATCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
3UTR-3UTR CAA 90 bp ATAATCTGGCACAACCGGAAGGCAGGAGTCAAAACCTGGCAAAGGTGGCTGCCCCCCATATCCCCGACCTaGTCTCGGAGATGGATGCTG +
Preference number: 3 (lower is better)
Translates to: IIWHNRKAGVKTWQRWLPPISPT*SRRWML
Trigger: CAGCATCCATCTCCGAGACAAGGTCGGGGATATGGG...GGGCAGCCACCTTTGCCAGGTTTTGACTCCTGCCTTCCGGTTGTGCCAGATTAT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
3UTR-3UTR CAA 90 bp GGCCTGAAAAGGCAGTTGAAGTCAGCGCTGCAGAATCTTGGCACTTCCCAGGAGAGCAATGGACTTGGCTaGCCCAGGACAAGTCAGGAC +
Preference number: 3 (lower is better)
Translates to: GLKRQLKSALQNLGTSQESNGLG*PRTSQD
Trigger: GTCCTGACTTGTCCTGGGCAAGCCAAGTCCATTGCT...CTCCTGGGAAGTGCCAAGATTCTGCAGCGCTGACTTCAACTGCCTTTTCAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000471924.5
ENST00000486353.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
3UTR-3UTR CAA 90 bp CAACTGCTCCGAAATGGCCCGAAAGAGGCAAGAGGCATCCTTGGCAGTCAGCTTGCAGAAGCAATGGACTaGGCTTGCCCAGGACAAGTC +
Preference number: 3 (lower is better)
Translates to: QLLRNGPKEARGILGSQLAEAMD*ACPGQV
Trigger: GACTTGTCCTGGGCAAGCCAAGTCCATTGCTTCTGC...AAGCTGACTGCCAAGGATGCCTCTTGCCTCTTTCGGGCCATTTCGGAGCAGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000486353.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
3UTR CCA 72 bp GCTCCGAAATGGCCCGAAAGAGGCAAGAGGCATCCTTaGCAGTCAGCTTTCGAAACAGCCCTAAGCTGCCTA +
Preference number: 3 (lower is better)
Translates to: APKWPERGKRHP*QSAFETALSCL
Trigger: TAGGCAGCTTAGGGCTGTTTCGAAAGCTGACTGCCAAGGATGCCTCTTGCCTCTTTCGGGCCATTTCGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000486353.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000624881.3
3UTR-3UTR CAA 90 bp AGGGTGCAGGTAGGATGGGTAGCAGTAACAAGGGCTTGCTTATGCAGGTATCCGGCAGAAGCAATGGACTaGGCTTGCCCAGGACAAGTC +
Preference number: 3 (lower is better)
Translates to: RVQVGWVAVTRACLCRYPAEAMD*ACPGQV
Trigger: GACTTGTCCTGGGCAAGCCAAGTCCATTGCTTCTGC...CGGATACCTGCATAAGCAAGCCCTTGTTACTGCTACCCATCCTACCTGCACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000486353.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
3UTR-3UTR CAA 90 bp ATAATCTGGCACAACCGGAAGGCAGGAGTCAAAACCTGGCAAAGGTGGCTGCCCGGCCTGAAAAGGCAGTaGAAGTCAGCGCTGCAGAAT +
Preference number: 3 (lower is better)
Translates to: IIWHNRKAGVKTWQRWLPGLKRQ*KSALQN
Trigger: ATTCTGCAGCGCTGACTTCAACTGCCTTTTCAGGCC...GGGCAGCCACCTTTGCCAGGTTTTGACTCCTGCCTTCCGGTTGTGCCAGATTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
3UTR-3UTR CAA 90 bp AATCTGGCACAACCGGAAGGCAGGAGTCAAAACCTGGCAAAGGTGGCTGCCCATGGCCTGAAAAGGCAGTaGAAGTCAGCGCTGCAGAAT +
Preference number: 3 (lower is better)
Translates to: NLAQPEGRSQNLAKVAAHGLKRQ*KSALQN
Trigger: ATTCTGCAGCGCTGACTTCAACTGCCTTTTCAGGCC...ATGGGCAGCCACCTTTGCCAGGTTTTGACTCCTGCCTTCCGGTTGTGCCAGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
3UTR-3UTR CAA 90 bp TGGGCATCCCATATCCCCGACCTTGTCTCGGAGATGGATGCTGAGGATGAAAATTGGCCAGCACTTTCCTaGGGATCTCCCAACCGTTCC +
Preference number: 3 (lower is better)
Translates to: WASHIPDLVSEMDAEDENWPALS*GSPNRS
Trigger: GGAACGGTTGGGAGATCCCAAGGAAAGTGCTGGCCA...ATTTTCATCCTCAGCATCCATCTCCGAGACAAGGTCGGGGATATGGGATGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
3UTR-3UTR CAA 90 bp AATCTGGCACAACCGGAAGGCAGGAGTCAAAACCTGGCAAAGGTGGCTGCCCATGCATTGAGGAACGGTTaGATCTACCAGAGGTGGCTC +
Preference number: 3 (lower is better)
Translates to: NLAQPEGRSQNLAKVAAHALRNG*IYQRWL
Trigger: GAGCCACCTCTGGTAGATCAAACCGTTCCTCAATGC...ATGGGCAGCCACCTTTGCCAGGTTTTGACTCCTGCCTTCCGGTTGTGCCAGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
3UTR-3UTR CAA 90 bp CCTGAGGTACATAATGAGAAGCTGGGGGAGATGGAGCAATACAGCCAATTGGCCAGCAATGGACTTGGCTaGCCCAGGACAAGTCAGGAC +
Preference number: 3 (lower is better)
Translates to: PEVHNEKLGEMEQYSQLASNGLG*PRTSQD
Trigger: GTCCTGACTTGTCCTGGGCAAGCCAAGTCCATTGCT...GGCCAATTGGCTGTATTGCTCCATCTCCCCCAGCTTCTCATTATGTACCTCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
3UTR-3UTR CAA 90 bp TGCTCCGAAATGGCCCGAAAGAGGCAAGAGGCATCCTTGGCAGTCAGCTTTCGAAGCAGTAACAAGGGCTaGCTTATGCAGGTATCCGGA +
Preference number: 3 (lower is better)
Translates to: CSEMARKRQEASLAVSFRSSNKG*LMQVSG
Trigger: TCCGGATACCTGCATAAGCAAGCCCTTGTTACTGCT...TCGAAAGCTGACTGCCAAGGATGCCTCTTGCCTCTTTCGGGCCATTTCGGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000486353.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
3UTR GCA 72 bp CAGGTAGGATGGGTAGCAGTAACAAGGGCTTGCTTATaGAGGTATCCGGAAAGCAGCCCAAAGTCTAGGCCT +
Preference number: 3 (lower is better)
Translates to: QVGWVAVTRACL*RYPESSPKSRP
Trigger: AGGCCTAGACTTTGGGCTGCTTTCCGGATACCTGCATAAGCAAGCCCTTGTTACTGCTACCCATCCTACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000486353.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
3UTR GCA 72 bp AGGGTGCAGGTAGGATGGGTAGCAGTAACAAGGGCTTaGTTATGCAGGTATCCGGAAAGCAGCCCAAAGTCT +
Preference number: 3 (lower is better)
Translates to: RVQVGWVAVTRA*LCRYPESSPKS
Trigger: AGACTTTGGGCTGCTTTCCGGATACCTGCATAAGCAAGCCCTTGTTACTGCTACCCATCCTACCTGCACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000486353.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
3UTR CCA 72 bp CCTGAAAAGGCAGTTGAAGTCAGCGCTGCAGAATCTTaGCACTTCCCAGGAGCAGAAGCAATGGACTTGGCT +
Preference number: 3 (lower is better)
Translates to: PEKAVEVSAAES*HFPGAEAMDLA
Trigger: AGCCAAGTCCATTGCTTCTGCTCCTGGGAAGTGCCAAGATTCTGCAGCGCTGACTTCAACTGCCTTTTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000471924.5
ENST00000486353.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
3UTR-3UTR CAA 90 bp CCCAGGAGCAGAAGCAATGGACTTGGCTTGCCCAGGACAAGTCAGGACCTTTTTTTTTCTGTGGTAGAGTaGCGGGGGTTTCTTTCCGAG +
Preference number: 3 (lower is better)
Translates to: PRSRSNGLGLPRTSQDLFFSVVE*RGFLSE
Trigger: CTCGGAAAGAAACCCCCGCAACTCTACCACAGAAAA...AAAAAGGTCCTGACTTGTCCTGGGCAAGCCAAGTCCATTGCTTCTGCTCCTGGG
52% GC, longest homopolymer 9 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000471924.5
3UTR-3UTR CAA 90 bp GCTGCAAAACAACTGCTCCGAAATGGCCCGAAAGAGGCAAGAGGCATCCTTGGCCTTTGTGTAGCTGCTTaGCCAGTTCCAGCTGATGAT +
Preference number: 3 (lower is better)
Translates to: AAKQLLRNGPKEARGILGLCVAA*PVPADD
Trigger: ATCATCAGCTGGAACTGGCAAAGCAGCTACACAAAG...GCCAAGGATGCCTCTTGCCTCTTTCGGGCCATTTCGGAGCAGTTGTTTTGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
3UTR-3UTR CAA 90 bp AGTCTAGGCCTGAAAAGGCAGTTGAAGTCAGCGCTGCAGAATCTTGGCACTTCCGGCCTGAAAAGGCAGTaGAAGTCAGCGCTGCAGAAT +
Preference number: 3 (lower is better)
Translates to: SLGLKRQLKSALQNLGTSGLKRQ*KSALQN
Trigger: ATTCTGCAGCGCTGACTTCAACTGCCTTTTCAGGCC...GGAAGTGCCAAGATTCTGCAGCGCTGACTTCAACTGCCTTTTCAGGCCTAGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000471924.5
ENST00000486353.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
3UTR-3UTR CAA 90 bp TCTTCCTTTCCGACTGGGCATAGCATTCCAGGCAGGAACAGACATCACTTGGGTAGGCAAGAGGCATCCTaGGCAGTCAGCTTTCGAAAC +
Preference number: 3 (lower is better)
Translates to: SSFPTGHSIPGRNRHHLGRQEAS*AVSFRN
Trigger: GTTTCGAAAGCTGACTGCCAAGGATGCCTCTTGCCT...ACCCAAGTGATGTCTGTTCCTGCCTGGAATGCTATGCCCAGTCGGAAAGGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
3UTR-3UTR CAA 90 bp TCACCTCACTGTAGCATTGAGGAACGGTTTGATCTACCAGAGGTGGCTCAGTATTGGCCAGCACTTTCCTaGGGATCTCCCAACCGTTCC +
Preference number: 3 (lower is better)
Translates to: SPHCSIEERFDLPEVAQYWPALS*GSPNRS
Trigger: GGAACGGTTGGGAGATCCCAAGGAAAGTGCTGGCCA...ATACTGAGCCACCTCTGGTAGATCAAACCGTTCCTCAATGCTACAGTGAGGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
3UTR-3UTR CAA 90 bp ACTTTCCTTGGGATCTCCCAACCGTTCCAGGTATTTCTCAAAAGATCCCTCCACGCAGAAGCAATGGACTaGGCTTGCCCAGGACAAGTC +
Preference number: 3 (lower is better)
Translates to: TFLGISQPFQVFLKRSLHAEAMD*ACPGQV
Trigger: GACTTGTCCTGGGCAAGCCAAGTCCATTGCTTCTGC...GTGGAGGGATCTTTTGAGAAATACCTGGAACGGTTGGGAGATCCCAAGGAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
3UTR-3UTR CAA 90 bp AAAAGGCAGTTGAAGTCAGCGCTGCAGAATCTTGGCACTTCCCAGGAGCAGAAGAGCAGTAACAAGGGCTaGCTTATGCAGGTATCCGGA +
Preference number: 3 (lower is better)
Translates to: KRQLKSALQNLGTSQEQKSSNKG*LMQVSG
Trigger: TCCGGATACCTGCATAAGCAAGCCCTTGTTACTGCT...CTTCTGCTCCTGGGAAGTGCCAAGATTCTGCAGCGCTGACTTCAACTGCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000486353.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
3UTR-3UTR CAA 90 bp AGGTACATAATGAGAAGCTGGGGGAGATGGAGCAATACAGCCAATTGGCCCAGGTTAGGGCCCGGCATGTaGTGCCTGTTTATAAACCGA +
Preference number: 3 (lower is better)
Translates to: RYIMRSWGRWSNTANWPRLGPGM*CLFINR
Trigger: TCGGTTTATAAACAGGCACAACATGCCGGGCCCTAA...CCTGGGCCAATTGGCTGTATTGCTCCATCTCCCCCAGCTTCTCATTATGTACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
3UTR-3UTR CAA 90 bp CAGGAAGCGTGCTGCAGGTACAATAGAAGAGATGACCCTCTTTGTGTAGCTGCTTTTTCTGTGGTAGAGTaGCGGGGGTTTCTTTCCGAG +
Preference number: 3 (lower is better)
Translates to: QEACCRYNRRDDPLCVAAFSVVE*RGFLSE
Trigger: CTCGGAAAGAAACCCCCGCAACTCTACCACAGAAAA...AGCAGCTACACAAAGAGGGTCATCTCTTCTATTGTACCTGCAGCACGCTTCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000468657.5
ENST00000489033.5
3UTR-3UTR CAA 90 bp AGTCTAGGCCTGAAAAGGCAGTTGAAGTCAGCGCTGCAGAATCTTGGCACTTCCCTTTGTGTAGCTGCTTaGCCAGTTCCAGCTGATGAT +
Preference number: 3 (lower is better)
Translates to: SLGLKRQLKSALQNLGTSLCVAA*PVPADD
Trigger: ATCATCAGCTGGAACTGGCAAAGCAGCTACACAAAG...GGAAGTGCCAAGATTCTGCAGCGCTGACTTCAACTGCCTTTTCAGGCCTAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000471924.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
3UTR-3UTR CAA 90 bp AGGTACATAATGAGAAGCTGGGGGAGATGGAGCAATACAGCCAATTGGCCCAGGCTTTGTGTAGCTGCTTaGCCAGTTCCAGCTGATGAT +
Preference number: 3 (lower is better)
Translates to: RYIMRSWGRWSNTANWPRLCVAA*PVPADD
Trigger: ATCATCAGCTGGAACTGGCAAAGCAGCTACACAAAG...CCTGGGCCAATTGGCTGTATTGCTCCATCTCCCCCAGCTTCTCATTATGTACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
3UTR-3UTR CAA 90 bp AGCAAACCTGACACTTGTCTCCCAAATAGTACTGTCTCCCAGCATACTCCATGTAGCAATGGACTTGGCTaGCCCAGGACAAGTCAGGAC +
Preference number: 3 (lower is better)
Translates to: SKPDTCLPNSTVSQHTPCSNGLG*PRTSQD
Trigger: GTCCTGACTTGTCCTGGGCAAGCCAAGTCCATTGCT...ACATGGAGTATGCTGGGAGACAGTACTATTTGGGAGACAAGTGTCAGGTTTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
3UTR-3UTR CAA 90 bp TCACCTCACTGTAGCATTGAGGAACGGTTTGATCTACCAGAGGTGGCTCAGTATAGGCAAGAGGCATCCTaGGCAGTCAGCTTTCGAAAC +
Preference number: 3 (lower is better)
Translates to: SPHCSIEERFDLPEVAQYRQEAS*AVSFRN
Trigger: GTTTCGAAAGCTGACTGCCAAGGATGCCTCTTGCCT...ATACTGAGCCACCTCTGGTAGATCAAACCGTTCCTCAATGCTACAGTGAGGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
3UTR-3UTR CAA 90 bp CTGAGGTACATAATGAGAAGCTGGGGGAGATGGAGCAATACAGCCAATTGGCCCAAATTCAAAGTCTGTTaGCCTGAGCTATGTCCCCGC +
Preference number: 3 (lower is better)
Translates to: LRYIMRSWGRWSNTANWPKFKVC*PELCPR
Trigger: GCGGGGACATAGCTCAGGCAAACAGACTTTGAATTT...GGGCCAATTGGCTGTATTGCTCCATCTCCCCCAGCTTCTCATTATGTACCTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
3UTR-3UTR CAA 90 bp AATCTGGCACAACCGGAAGGCAGGAGTCAAAACCTGGCAAAGGTGGCTGCCCATCAAAACTTTTGTATCTaGAGGCAAATCACTGCCGCT +
Preference number: 3 (lower is better)
Translates to: NLAQPEGRSQNLAKVAAHQNFCI*RQITAA
Trigger: AGCGGCAGTGATTTGCCTCAAGATACAAAAGTTTTG...ATGGGCAGCCACCTTTGCCAGGTTTTGACTCCTGCCTTCCGGTTGTGCCAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000470971.5
ENST00000623148.3
3UTR TCA 72 bp GTCAAAACCTGGCAAAGGTGGCTGCCCATAGGGATCTaGCATTACTGGATAATAGACTGCTCCATGAGGGAC +
Preference number: 3 (lower is better)
Translates to: VKTWQRWLPIGI*HYWIIDCSMRD
Trigger: GTCCCTCATGGAGCAGTCTATTATCCAGTAATGTCAGATCCCTATGGGCAGCCACCTTTGCCAGGTTTTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
3UTR GCA 72 bp TCTGGCCATTGCCCTCCTCTAAATTCAAAGTCTGTTTaGCTGAGCTATGTCCCCGCCTTCCAACACAGTATC +
Preference number: 3 (lower is better)
Translates to: SGHCPPLNSKSV*LSYVPAFQHSI
Trigger: GATACTGTGTTGGAAGGCGGGGACATAGCTCAGGCAAACAGACTTTGAATTTAGAGGAGGGCAATGGCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
3UTR CCA 72 bp TGGATCTTACATACCCTGAGGTACATAATGAGAAGCTaGGGGAGATGGAGCAATACAGCCAATTGGCCCAGG +
Preference number: 3 (lower is better)
Translates to: WILHTLRYIMRS*GRWSNTANWPR
Trigger: CCTGGGCCAATTGGCTGTATTGCTCCATCTCCCCCAGCTTCTCATTATGTACCTCAGGGTATGTAAGATCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
3UTR-3UTR CAA 90 bp AAAAGGCAGTTGAAGTCAGCGCTGCAGAATCTTGGCACTTCCCAGGAGCAGAAGCGTTCCTCTACCAATTaGCAGGATAAGTCGGTTGTA +
Preference number: 3 (lower is better)
Translates to: KRQLKSALQNLGTSQEQKRSSTN*QDKSVV
Trigger: TACAACCGACTTATCCTGCAAATTGGTAGAGGAACG...CTTCTGCTCCTGGGAAGTGCCAAGATTCTGCAGCGCTGACTTCAACTGCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000471924.5
ENST00000623144.3
ENST00000623148.3
3UTR-3UTR CAA 90 bp TTGCCCTCCTCTAAATTCAAAGTCTGTTTGCCTGAGCTATGTCCCCGCCTTCCACTTTGTGTAGCTGCTTaGCCAGTTCCAGCTGATGAT +
Preference number: 3 (lower is better)
Translates to: LPSSKFKVCLPELCPRLPLCVAA*PVPADD
Trigger: ATCATCAGCTGGAACTGGCAAAGCAGCTACACAAAG...TGGAAGGCGGGGACATAGCTCAGGCAAACAGACTTTGAATTTAGAGGAGGGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
3UTR-3UTR CAA 90 bp GCTGCATCTGTGGCACATAGACCATGGAGTGCCAGTAGCTGTGGTAATAGCACTCATCCTTTATGCATTTaGTACAGGGTGGGGGTAAGA +
Preference number: 3 (lower is better)
Translates to: AASVAHRPWSASSCGNSTHPLCI*YRVGVR
Trigger: TCTTACCCCCACCCTGTACAAAATGCATAAAGGATG...AGTGCTATTACCACAGCTACTGGCACTCCATGGTCTATGTGCCACAGATGCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
3UTR-3UTR CAA 90 bp AAAGCAGAGAACCATGTGCCTTCAAAACTGATATCACAGAATGCAACTGGCTTCCCCATATCCCCGACCTaGTCTCGGAGATGGATGCTG +
Preference number: 3 (lower is better)
Translates to: KAENHVPSKLISQNATGFPISPT*SRRWML
Trigger: CAGCATCCATCTCCGAGACAAGGTCGGGGATATGGG...GAAGCCAGTTGCATTCTGTGATATCAGTTTTGAAGGCACATGGTTCTCTGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000470971.5
ENST00000624161.3
ENST00000636363.1
3UTR CCA 72 bp CCTGGGCATCCCATATCCCCGACCTTGTCTCGGAGATaGATGCTGAGGATGAAAATGTTCATTAGACATAAC +
Preference number: 3 (lower is better)
Translates to: PGHPISPTLSRR*MLRMKMFIRHN
Trigger: GTTATGTCTAATGAACATTTTCATCCTCAGCATCCATCTCCGAGACAAGGTCGGGGATATGGGATGCCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
3UTR CCA 72 bp AGAGAAGTTATCATAGCTCTGGCAGCACCTTTTACCTaGGCCTGGGTAAAAATCAACTTTAGGGCCCGGCAT +
Preference number: 3 (lower is better)
Translates to: REVIIALAAPFT*AWVKINFRARH
Trigger: ATGCCGGGCCCTAAAGTTGATTTTTACCCAGGCCCAGGTAAAAGGTGCTGCCAGAGCTATGATAACTTCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
3UTR CCA 72 bp TGGATAATTCTCTACATGAAGCTGCTGCTGCATCTGTaGCACATAGACCATGGAGTGCCAGTAGCTGTGGTA +
Preference number: 3 (lower is better)
Translates to: WIILYMKLLLHL*HIDHGVPVAVV
Trigger: TACCACAGCTACTGGCACTCCATGGTCTATGTGCCACAGATGCAGCAGCAGCTTCATGTAGAGAATTATCCA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
3UTR-3UTR CAA 90 bp AGGTACAATAGAAGAGATGACCCTCTTTGTGTAGCTGCTTTGCCAGTTCCAGCTTTTTCTGTGGTAGAGTaGCGGGGGTTTCTTTCCGAG +
Preference number: 3 (lower is better)
Translates to: RYNRRDDPLCVAALPVPAFSVVE*RGFLSE
Trigger: CTCGGAAAGAAACCCCCGCAACTCTACCACAGAAAA...AGCTGGAACTGGCAAAGCAGCTACACAAAGAGGGTCATCTCTTCTATTGTACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000468657.5
ENST00000471924.5
ENST00000489033.5
ENST00000622997.3
ENST00000623144.3
ENST00000623148.3
3UTR-3UTR CAA 90 bp AGATCTATAAGAGAAGTTATCATAGCTCTGGCAGCACCTTTTACCTGGGCCTGGTTTTCTGTGGTAGAGTaGCGGGGGTTTCTTTCCGAG +
Preference number: 3 (lower is better)
Translates to: RSIREVIIALAAPFTWAWFSVVE*RGFLSE
Trigger: CTCGGAAAGAAACCCCCGCAACTCTACCACAGAAAA...CCAGGCCCAGGTAAAAGGTGCTGCCAGAGCTATGATAACTTCTCTTATAGATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000623144.3
ENST00000623148.3
3UTR-3UTR CAA 90 bp CTGAGGTACATAATGAGAAGCTGGGGGAGATGGAGCAATACAGCCAATTGGCCCTTTTCACTCTGGCCATaGCCCTCCTCTAAATTCAAA +
Preference number: 3 (lower is better)
Translates to: LRYIMRSWGRWSNTANWPFSLWP*PSSKFK
Trigger: TTTGAATTTAGAGGAGGGCAATGGCCAGAGTGAAAA...GGGCCAATTGGCTGTATTGCTCCATCTCCCCCAGCTTCTCATTATGTACCTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
3UTR-3UTR CAA 90 bp CTGCTCCATGAGGGACAGATGAAGAATCAGCATTCGGAAAAGTATCATTTGCTGTTTTCTGTGGTAGAGTaGCGGGGGTTTCTTTCCGAG +
Preference number: 3 (lower is better)
Translates to: LLHEGQMKNQHSEKYHLLFSVVE*RGFLSE
Trigger: CTCGGAAAGAAACCCCCGCAACTCTACCACAGAAAA...CAGCAAATGATACTTTTCCGAATGCTGATTCTTCATCTGTCCCTCATGGAGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000623144.3
ENST00000623148.3
3UTR-3UTR CAA 90 bp TCCTTTATTGTAGCCCTCTGGTATATTTTCAGCATTGTAGCAGGCACCCCACTCCTTTGTGTAGCTGCTTaGCCAGTTCCAGCTGATGAT +
Preference number: 3 (lower is better)
Translates to: SFIVALWYIFSIVAGTPLLCVAA*PVPADD
Trigger: ATCATCAGCTGGAACTGGCAAAGCAGCTACACAAAG...GAGTGGGGTGCCTGCTACAATGCTGAAAATATACCAGAGGGCTACAATAAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
3UTR-3UTR CAA 90 bp CGTACAATACAGCCTGACAAACAGCTGCACTTGACTGAAATTGTTTTGAGTACAGTACCTGTGGTAGAGTaGCGGGGGTTTCTTTCCGAG +
Preference number: 3 (lower is better)
Translates to: RTIQPDKQLHLTEIVLSTVPVVE*RGFLSE
Trigger: CTCGGAAAGAAACCCCCGCAACTCTACCACAGGTAC...TGTACTCAAAACAATTTCAGTCAAGTGCAGCTGTTTGTCAGGCTGTATTGTACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495283.5
3UTR-3UTR CAA 90 bp AGTCAAAACCTGGCAAAGGTGGCTGCCCATAGGGATCTGACATTACTGGATAATAGTGGTACTAATAGCTaGATTAGCCGCTGCACCGTT +
Preference number: 3 (lower is better)
Translates to: SQNLAKVAAHRDLTLLDNSGTNS*ISRCTV
Trigger: AACGGTGCAGCGGCTAATCAAGCTATTAGTACCACT...ATTATCCAGTAATGTCAGATCCCTATGGGCAGCCACCTTTGCCAGGTTTTGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
3UTR-3UTR CAA 90 bp AGCCCTCTGGTATATTTTCAGCATTGTAGCAGGCACCCCACTCTTCCATCCTATCATAGTGACCACTACTaGAGTAGCAGAGTAGAATCT +
Preference number: 3 (lower is better)
Translates to: SPLVYFQHCSRHPTLPSYHSDHY*SSRVES
Trigger: AGATTCTACTCTGCTACTCAAGTAGTGGTCACTATG...ATAGGATGGAAGAGTGGGGTGCCTGCTACAATGCTGAAAATATACCAGAGGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
3UTR-3UTR CAA 90 bp TGGGGTAAATCCATACTGGGACTCCTTATTCACACAACTCATCTGGCGGTGACTCATAGTGACCACTACTaGAGTAGCAGAGTAGAATCT +
Preference number: 3 (lower is better)
Translates to: WGKSILGLLIHTTHLAVTHSDHY*SSRVES
Trigger: AGATTCTACTCTGCTACTCAAGTAGTGGTCACTATG...AGTCACCGCCAGATGAGTTGTGTGAATAAGGAGTCCCAGTATGGATTTACCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
3UTR TCA 72 bp CAGGGCTTTGAGCACCTTATAGGGGAAGGGCATCTTTaGTGGATTTTCTGGAGACTTTGTTTCTTCTGTTCC +
Preference number: 3 (lower is better)
Translates to: QGFEHLIGEGHL*WIFWRLCFFCS
Trigger: GGAACAGAAGAAACAAAGTCTCCAGAAAATCCATCAAAGATGCCCTTCCCCTATAAGGTGCTCAAAGCCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
3UTR TCA 72 bp GCATTCTGTGAGGAAACTGAAGTGGTACTAATAGCTTaGTTAGCCGCTGCACCGTTAGATAAGACTGGAGCT +
Preference number: 3 (lower is better)
Translates to: AFCEETEVVLIA*LAAAPLDKTGA
Trigger: AGCTCCAGTCTTATCTAACGGTGCAGCGGCTAATCAAGCTATTAGTACCACTTCAGTTTCCTCACAGAATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
3UTR TCA 72 bp CAGGGCTTTGAGCACCTTATAGGGGAAGGGCATCTTTaGTGGATTTTCTGGAGACTTGTCTTCATAGCCATT +
Preference number: 3 (lower is better)
Translates to: QGFEHLIGEGHL*WIFWRLVFIAI
Trigger: AATGGCTATGAAGACAAGTCTCCAGAAAATCCATCAAAGATGCCCTTCCCCTATAAGGTGCTCAAAGCCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470971.5
3UTR CCA 72 bp AACGGTTTGATCTACCAGAGGTGGCTCAGTATAGACTaGATAATTCTCTACATGAAGCTGCTGCTGCATCTG +
Preference number: 3 (lower is better)
Translates to: NGLIYQRWLSID*IILYMKLLLHL
Trigger: CAGATGCAGCAGCAGCTTCATGTAGAGAATTATCCAGTCTATACTGAGCCACCTCTGGTAGATCAAACCGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
3UTR-3UTR CAA 90 bp TCCAGAGTAAACGACTCAGTACTGAAGGGTTCAGGTACCACCGTTCCTCTACCAATCACATTACATAGGTaGAATTTGGGGGTTGCTTTT +
Preference number: 3 (lower is better)
Translates to: SRVNDSVLKGSGTTVPLPITLHR*NLGVAF
Trigger: AAAAGCAACCCCCAAATTCAACCTATGTAATGTGAT...TGGTAGAGGAACGGTGGTACCTGAACCCTTCAGTACTGAGTCGTTTACTCTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000468657.5
ENST00000489033.5
3UTR-3UTR CAA 90 bp ATTGTTTTGAGTACACAGAATCATAGTGACCACTACTTGAGTAGCAGAGTAGAAAGCAATGGACTTGGCTaGCCCAGGACAAGTCAGGAC +
Preference number: 3 (lower is better)
Translates to: IVLSTQNHSDHYLSSRVESNGLG*PRTSQD
Trigger: GTCCTGACTTGTCCTGGGCAAGCCAAGTCCATTGCT...TTCTACTCTGCTACTCAAGTAGTGGTCACTATGATTCTGTGTACTCAAAACAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
3UTR-3UTR CAA 90 bp AGATCTATAAGAGAAGTTATCATAGCTCTGGCAGCACCTTTTACCTGGGCCTGGCATAGTGACCACTACTaGAGTAGCAGAGTAGAATCT +
Preference number: 3 (lower is better)
Translates to: RSIREVIIALAAPFTWAWHSDHY*SSRVES
Trigger: AGATTCTACTCTGCTACTCAAGTAGTGGTCACTATG...CCAGGCCCAGGTAAAAGGTGCTGCCAGAGCTATGATAACTTCTCTTATAGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
3UTR-3UTR CAA 90 bp TGGGGTAAATCCATACTGGGACTCCTTATTCACACAACTCATCTGGCGGTGACTGACAAACAGCTGCACTaGACTGAAATTGTTTTGAGT +
Preference number: 3 (lower is better)
Translates to: WGKSILGLLIHTTHLAVTDKQLH*TEIVLS
Trigger: ACTCAAAACAATTTCAGTCAAGTGCAGCTGTTTGTC...AGTCACCGCCAGATGAGTTGTGTGAATAAGGAGTCCCAGTATGGATTTACCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
3UTR GCA 72 bp CATCCTTGGCAGTCAGCTTTCGAAACAGCCCTAAGCTaGCTAAATATTCATCCATTGATGCCTCATTCAAAG +
Preference number: 3 (lower is better)
Translates to: HPWQSAFETALS*LNIHPLMPHSK
Trigger: CTTTGAATGAGGCATCAATGGATGAATATTTAGGCAGCTTAGGGCTGTTTCGAAAGCTGACTGCCAAGGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000486353.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000624881.3
3UTR GCA 72 bp ATTCTTCATGATATCGCCCATTTTCACTCTGGCCATTaGCCTCCTCTAAATTCAAAGTCTGTTTGCCTGAGC +
Preference number: 3 (lower is better)
Translates to: ILHDIAHFHSGH*PPLNSKSVCLS
Trigger: GCTCAGGCAAACAGACTTTGAATTTAGAGGAGGGCAATGGCCAGAGTGAAAATGGGCGATATCATGAAGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
3UTR GCA 72 bp AGTACTGCAAAACTTTTGTATCTTGAGGCAAATCACTaGCGCTTGGATCACAGGAATAAGGTGGAGGTGGTA +
Preference number: 3 (lower is better)
Translates to: STAKLLYLEANH*RLDHRNKVEVV
Trigger: TACCACCTCCACCTTATTCCTGTGATCCAAGCGGCAGTGATTTGCCTCAAGATACAAAAGTTTTGCAGTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000470971.5
ENST00000623148.3
3UTR-3UTR CAA 90 bp TTCCAGGCAGGAACAGACATCACTTGGGTAACTGGTTTTAAGTTAGCCAGTGGAGACAAACAGCTGCACTaGACTGAAATTGTTTTGAGT +
Preference number: 3 (lower is better)
Translates to: FQAGTDITWVTGFKLASGDKQLH*TEIVLS
Trigger: ACTCAAAACAATTTCAGTCAAGTGCAGCTGTTTGTC...TCCACTGGCTAACTTAAAACCAGTTACCCAAGTGATGTCTGTTCCTGCCTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
3UTR-3UTR CAA 90 bp GCATTCCAGGCAGGAACAGACATCACTTGGGTAACTGGTTTTAAGTTAGCCAGTGACAAACAGCTGCACTaGACTGAAATTGTTTTGAGT +
Preference number: 3 (lower is better)
Translates to: AFQAGTDITWVTGFKLASDKQLH*TEIVLS
Trigger: ACTCAAAACAATTTCAGTCAAGTGCAGCTGTTTGTC...ACTGGCTAACTTAAAACCAGTTACCCAAGTGATGTCTGTTCCTGCCTGGAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
3UTR-3UTR CAA 90 bp GATAAATCTAAAGCAGAGAACCATGTGCCTTCAAAACTGATATCACAGAATGCAGCATTGAGGAACGGTTaGATCTACCAGAGGTGGCTC +
Preference number: 3 (lower is better)
Translates to: DKSKAENHVPSKLISQNAALRNG*IYQRWL
Trigger: GAGCCACCTCTGGTAGATCAAACCGTTCCTCAATGC...TGCATTCTGTGATATCAGTTTTGAAGGCACATGGTTCTCTGCTTTAGATTTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000470971.5
ENST00000624161.3
ENST00000636363.1
3UTR TCA 72 bp ATTCTACATTACGATAGATTTCTGGATCCAGGGCTTTaGGCACCTTATAGGGGAAGGGCATCTTTGATGGAT +
Preference number: 3 (lower is better)
Translates to: ILHYDRFLDPGL*APYRGRASLMD
Trigger: ATCCATCAAAGATGCCCTTCCCCTATAAGGTGCTCAAAGCCCTGGATCCAGAAATCTATCGTAATGTAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
3UTR TCA 72 bp GCCAGTAGCTGTGGTAATAGCACTGCAATCCTAGATTaGAATAGTACTGCAAAACTTTTGTATCTGGCCTGC +
Preference number: 3 (lower is better)
Translates to: ASSCGNSTAILD*NSTAKLLYLAC
Trigger: GCAGGCCAGATACAAAAGTTTTGCAGTACTATTTCAATCTAGGATTGCAGTGCTATTACCACAGCTACTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000624161.3
ENST00000636363.1
3UTR-3UTR CAA 90 bp TCCACAAAAGGGAAGTCAGAGGCGTTACTGCACACAATTGACAACAACGGCTTAATCACATTACATAGGTaGAATTTGGGGGTTGCTTTT +
Preference number: 3 (lower is better)
Translates to: STKGKSEALLHTIDNNGLITLHR*NLGVAF
Trigger: AAAAGCAACCCCCAAATTCAACCTATGTAATGTGAT...TAAGCCGTTGTTGTCAATTGTGTGCAGTAACGCCTCTGACTTCCCTTTTGTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371979.7
3UTR-3UTR CAA 90 bp AGGTACAATAGAAGAGATGACCCTCTTTGTGTAGCTGCTTTGCCAGTTCCAGCTATCACATTACATAGGTaGAATTTGGGGGTTGCTTTT +
Preference number: 3 (lower is better)
Translates to: RYNRRDDPLCVAALPVPAITLHR*NLGVAF
Trigger: AAAAGCAACCCCCAAATTCAACCTATGTAATGTGAT...AGCTGGAACTGGCAAAGCAGCTACACAAAGAGGGTCATCTCTTCTATTGTACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000468657.5
ENST00000482374.5
ENST00000489033.5
ENST00000492038.5
3UTR-3UTR CAA 90 bp CATCAACTTTTCGTTTATAACCACTACGAGTGGCTTTCCTTTTTCCAGAGTCTCCGTTCCTCTACCAATTaGCAGGATAAGTCGGTTGTA +
Preference number: 3 (lower is better)
Translates to: HQLFVYNHYEWLSFFQSLRSSTN*QDKSVV
Trigger: TACAACCGACTTATCCTGCAAATTGGTAGAGGAACG...GAGACTCTGGAAAAAGGAAAGCCACTCGTAGTGGTTATAAACGAAAAGTTGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000468657.5
ENST00000471924.5
ENST00000489033.5
ENST00000622997.3
ENST00000623144.3
ENST00000623148.3
3UTR-3UTR CAA 90 bp ATTGTGCTGCTTACAGCCCAGTACCCCTCTCTTCAGTTTAACGACTATTTTATAGTCCCCTTAGTGATTTaGGCTTTCGAAGTTCAAGAG +
Preference number: 3 (lower is better)
Translates to: IVLLTAQYPSLQFNDYFIVPLVI*AFEVQE
Trigger: CTCTTGAACTTCGAAAGCCAAAATCACTAAGGGGAC...TATAAAATAGTCGTTAAACTGAAGAGAGGGGTACTGGGCTGTAAGCAGCACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000474121.1
3UTR TCA 72 bp CACAAAAGGGAAGTCAGAGGCGTTACTGCACACAATTaGCAACAACGGCTTAAACCTCTGCTAAATGAAATA +
Preference number: 3 (lower is better)
Translates to: HKREVRGVTAHN*QQRLKPLLNEI
Trigger: TATTTCATTTAGCAGAGGTTTAAGCCGTTGTTGTCAATTGTGTGCAGTAACGCCTCTGACTTCCCTTTTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371979.7
3UTR TCA 72 bp GTTGATTTTCCCTCATATATGAGACACAAGCCTTCCTaGTTTCCAAATGATGGACCTGGCTGCAAAACAACT +
Preference number: 3 (lower is better)
Translates to: VDFPSYMRHKPS*FPNDGPGCKTT
Trigger: AGTTGTTTTGCAGCCAGGTCCATCATTTGGAAATCAGGAAGGCTTGTGTCTCATATATGAGGGAAAATCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000624881.3
3UTR-3UTR CAA 90 bp AGCAGAGAACCATGTGCCTTCAAAACTGATATCACAGAATGCAACTGGCTTCAGCAGAAGCAAAGGCTCTaGGTTTTACTTTCTAGAAAA +
Preference number: 3 (lower is better)
Translates to: SREPCAFKTDITECNWLQQKQRL*VLLSRK
Trigger: TTTTCTAGAAAGTAAAACCAAGAGCCTTTGCTTCTG...CTGAAGCCAGTTGCATTCTGTGATATCAGTTTTGAAGGCACATGGTTCTCTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000251943.8
ENST00000394780.8
ENST00000436609.5
ENST00000470971.5
ENST00000610588.4
ENST00000621367.4
ENST00000624161.3
ENST00000636363.1
3UTR-3UTR CAA 90 bp GCAGAGAACCATGTGCCTTCAAAACTGATATCACAGAATGCAACTGGCTTCAGACAGAAGCAAAGGCTCTaGGTTTTACTTTCTAGAAAA +
Preference number: 3 (lower is better)
Translates to: AENHVPSKLISQNATGFRQKQRL*VLLSRK
Trigger: TTTTCTAGAAAGTAAAACCAAGAGCCTTTGCTTCTG...TCTGAAGCCAGTTGCATTCTGTGATATCAGTTTTGAAGGCACATGGTTCTCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000251943.8
ENST00000394780.8
ENST00000436609.5
ENST00000470971.5
ENST00000610588.4
ENST00000621367.4
ENST00000624161.3
ENST00000636363.1
3UTR-3UTR CAA 90 bp ACTGCAATTAGGATTTGGACCCAATGCAAATGTGCACAACATAAAATTTCCTATTTTTCTGTGGTAGAGTaGCGGGGGTTTCTTTCCGAG +
Preference number: 3 (lower is better)
Translates to: TAIRIWTQCKCAQHKISYFSVVE*RGFLSE
Trigger: CTCGGAAAGAAACCCCCGCAACTCTACCACAGAAAA...ATAGGAAATTTTATGTTGTGCACATTTGCATTGGGTCCAAATCCTAATTGCAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000468657.5
ENST00000489033.5
3UTR-3UTR CAA 90 bp GATCTGACATTACTGGATAATAGACTGCTCCATGAGGGACAGATGAAGAATCAGGACAAACAGCTGCACTaGACTGAAATTGTTTTGAGT +
Preference number: 3 (lower is better)
Translates to: DLTLLDNRLLHEGQMKNQDKQLH*TEIVLS
Trigger: ACTCAAAACAATTTCAGTCAAGTGCAGCTGTTTGTC...CTGATTCTTCATCTGTCCCTCATGGAGCAGTCTATTATCCAGTAATGTCAGATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
3UTR-3UTR CAA 90 bp TCTAAAGCAGAGAACCATGTGCCTTCAAAACTGATATCACAGAATGCAACTGGCCAGAAGCAAAGGCTCTaGGTTTTACTTTCTAGAAAA +
Preference number: 3 (lower is better)
Translates to: SKAENHVPSKLISQNATGQKQRL*VLLSRK
Trigger: TTTTCTAGAAAGTAAAACCAAGAGCCTTTGCTTCTG...GCCAGTTGCATTCTGTGATATCAGTTTTGAAGGCACATGGTTCTCTGCTTTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000251943.8
ENST00000394780.8
ENST00000436609.5
ENST00000470971.5
ENST00000610588.4
ENST00000621367.4
ENST00000624161.3
ENST00000636363.1
3UTR-3UTR CAA 90 bp GTATTAAACAATAGCATATGGGATAAATCTAAAGCAGAGAACCATGTGCCTTCACTTTGTGTAGCTGCTTaGCCAGTTCCAGCTGATGAT +
Preference number: 3 (lower is better)
Translates to: VLNNSIWDKSKAENHVPSLCVAA*PVPADD
Trigger: ATCATCAGCTGGAACTGGCAAAGCAGCTACACAAAG...TGAAGGCACATGGTTCTCTGCTTTAGATTTATCCCATATGCTATTGTTTAATAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470971.5
ENST00000624161.3
3UTR-3UTR CAA 90 bp ATTGTTTTGAGTACACAGAATCATAGTGACCACTACTTGAGTAGCAGAGTAGAACATCCTTTATGCATTTaGTACAGGGTGGGGGTAAGA +
Preference number: 3 (lower is better)
Translates to: IVLSTQNHSDHYLSSRVEHPLCI*YRVGVR
Trigger: TCTTACCCCCACCCTGTACAAAATGCATAAAGGATG...TTCTACTCTGCTACTCAAGTAGTGGTCACTATGATTCTGTGTACTCAAAACAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
3UTR-3UTR CAA 90 bp CTCTGCACGATAAAGATATTCTTCATGATATCGCCCATTTTCACTCTGGCCATTTTCCCTCGAATTTTCTaGAACATCTTCTTCTGTTGC +
Preference number: 3 (lower is better)
Translates to: LCTIKIFFMISPIFTLAIFPRIF*NIFFCC
Trigger: GCAACAGAAGAAGATGTTCAAGAAAATTCGAGGGAA...AATGGCCAGAGTGAAAATGGGCGATATCATGAAGAATATCTTTATCGTGCAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
3UTR TCA 72 bp CAAGTTTGCTGTAGATGCAGTTGTGCTATAAACACCTaGAGTTTCATAGTCTGGCTCTGCACGATAAAGATA +
Preference number: 3 (lower is better)
Translates to: QVCCRCSCAINT*SFIVWLCTIKI
Trigger: TATCTTTATCGTGCAGAGCCAGACTATGAAACTTCAGGTGTTTATAGCACAACTGCATCTACAGCAAACTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
3UTR TCA 72 bp GCCAGTAGCTGTGGTAATAGCACTGCAATCCTAGATTaGAATAGTACTGCAAAACTTTTGTATCTTGAGGCA +
Preference number: 3 (lower is better)
Translates to: ASSCGNSTAILD*NSTAKLLYLEA
Trigger: TGCCTCAAGATACAAAAGTTTTGCAGTACTATTTCAATCTAGGATTGCAGTGCTATTACCACAGCTACTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000470971.5
ENST00000623148.3
3UTR TCA 72 bp TGTAATGTTAAATATGATGGCTCATCTAATATATGCTaGTTGTGCTGCTTACAGCCCAGTACCCCTCTCTTC +
Preference number: 3 (lower is better)
Translates to: CNVKYDGSSNIC*LCCLQPSTPLF
Trigger: GAAGAGAGGGGTACTGGGCTGTAAGCAGCACAATCAGCATATATTAGATGAGCCATCATATTTAACATTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474121.1
3UTR TCA 72 bp AGCAGAGTAGAATCTTGTCTTCATAGCCATTATCTGTaGCATAAGTTGGAGGTTTTCCAGGAAAGCGATAAA +
Preference number: 3 (lower is better)
Translates to: SRVESCLHSHYL*HKLEVFQESDK
Trigger: TTTATCGCTTTCCTGGAAAACCTCCAACTTATGTCACAGATAATGGCTATGAAGACAAGATTCTACTCTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
3UTR TCA 72 bp GATTTTCTGGAGACTTGTCTTCATAGCCATTATCTGTaGCATAAGTTGGAGGTTTTCCAGGAAAGCGATAAA +
Preference number: 3 (lower is better)
Translates to: DFLETCLHSHYL*HKLEVFQESDK
Trigger: TTTATCGCTTTCCTGGAAAACCTCCAACTTATGTCACAGATAATGGCTATGAAGACAAGTCTCCAGAAAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470971.5
3UTR GCA 72 bp AGAGAACCATGTGCCTTCAAAACTGATATCACAGAATaGAACTGGCTTCAGATAATTCTCAAGAAACGTGAA +
Preference number: 3 (lower is better)
Translates to: REPCAFKTDITE*NWLQIILKKRE
Trigger: TTCACGTTTCTTGAGAATTATCTGAAGCCAGTTGCATTCTGTGATATCAGTTTTGAAGGCACATGGTTCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000251943.8
ENST00000394780.8
ENST00000436609.5
ENST00000470971.5
ENST00000610588.4
ENST00000621367.4
ENST00000623310.1
ENST00000624161.3
ENST00000636363.1
3UTR-3UTR CAA 90 bp AGTTTCATAGTCTGGCTCTGCACGATAAAGATATTCTTCATGATATCGCCCATTCAGAAGCAAAGGCTCTaGGTTTTACTTTCTAGAAAA +
Preference number: 3 (lower is better)
Translates to: SFIVWLCTIKIFFMISPIQKQRL*VLLSRK
Trigger: TTTTCTAGAAAGTAAAACCAAGAGCCTTTGCTTCTG...AATGGGCGATATCATGAAGAATATCTTTATCGTGCAGAGCCAGACTATGAAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000470971.5
ENST00000624161.3
ENST00000636363.1
3UTR-3UTR CAA 90 bp CTAACTGTGCAAAAGACACCAATTCAATACAGTGCAGTAAAACACTTACATACACAGAAGCAAAGGCTCTaGGTTTTACTTTCTAGAAAA +
Preference number: 3 (lower is better)
Translates to: LTVQKTPIQYSAVKHLHTQKQRL*VLLSRK
Trigger: TTTTCTAGAAAGTAAAACCAAGAGCCTTTGCTTCTG...TGTATGTAAGTGTTTTACTGCACTGTATTGAATTGGTGTCTTTTGCACAGTTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000251943.8
ENST00000394780.8
ENST00000436609.5
ENST00000470971.5
ENST00000610588.4
ENST00000621367.4
ENST00000624161.3
3UTR-3UTR CAA 90 bp ACTGCAATTAGGATTTGGACCCAATGCAAATGTGCACAACATAAAATTTCCTATATCACATTACATAGGTaGAATTTGGGGGTTGCTTTT +
Preference number: 3 (lower is better)
Translates to: TAIRIWTQCKCAQHKISYITLHR*NLGVAF
Trigger: AAAAGCAACCCCCAAATTCAACCTATGTAATGTGAT...ATAGGAAATTTTATGTTGTGCACATTTGCATTGGGTCCAAATCCTAATTGCAGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371979.7
ENST00000468657.5
ENST00000489033.5
ENST00000492038.5
3UTR TCA 72 bp ATAAGACTCAAAAGTTTGTTGATTTTCCCTCATATATaGGACACAAGCCTTCCTGATTTCCAAATGATGGAC +
Preference number: 3 (lower is better)
Translates to: IRLKSLLIFPHI*DTSLPDFQMMD
Trigger: GTCCATCATTTGGAAATCAGGAAGGCTTGTGTCTCATATATGAGGGAAAATCAACAAACTTTTGAGTCTTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000624881.3
CDS-3UTR CCA 90 bp GGCCTGAAAAGGCAGTTGAAGTCAGCGCTGCAGAATCTTGGCACTTCCCAGGAGGCCGGAGATGGCGGGTaGCGAGCCAAGCCGCCGCCT +
Preference number: 4 (lower is better)
Translates to: GLKRQLKSALQNLGTSQEAGDGG*RAKPPP
Trigger: AGGCGGCGGCTTGGCTCGCCACCCGCCATCTCCGGC...CTCCTGGGAAGTGCCAAGATTCTGCAGCGCTGACTTCAACTGCCTTTTCAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000471924.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
CDS-3UTR CCA 90 bp AACAACTGCTCCGAAATGGCCCGAAAGAGGCAAGAGGCATCCTTGGCAGTCAGCGCCGGAGATGGCGGGTaGCGAGCCAAGCCGCCGCCT +
Preference number: 4 (lower is better)
Translates to: NNCSEMARKRQEASLAVSAGDGG*RAKPPP
Trigger: AGGCGGCGGCTTGGCTCGCCACCCGCCATCTCCGGC...GCTGACTGCCAAGGATGCCTCTTGCCTCTTTCGGGCCATTTCGGAGCAGTTGTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
CDS-3UTR GCA 90 bp TGTACCTGTGGTAGAGTTGCGGGGGTTTCTTTCCGAGCGCGACGGTCAGGCAAGCCTCCCTCACTCACTTaGAGACTGTCGGGCGCCGAC +
Preference number: 4 (lower is better)
Translates to: CTCGRVAGVSFRARRSGKPPSLT*RLSGAD
Trigger: GTCGGCGCCCGACAGTCTGCAAGTGAGTGAGGGAGG...CTTGCCTGACCGTCGCGCTCGGAAAGAAACCCCCGCAACTCTACCACAGGTACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000482374.5
ENST00000495283.5
CDS-3UTR CCA 90 bp TGGGCATCCCATATCCCCGACCTTGTCTCGGAGATGGATGCTGAGGATGAAAATGCCGGAGATGGCGGGTaGCGAGCCAAGCCGCCGCCT +
Preference number: 4 (lower is better)
Translates to: WASHIPDLVSEMDAEDENAGDGG*RAKPPP
Trigger: AGGCGGCGGCTTGGCTCGCCACCCGCCATCTCCGGC...ATTTTCATCCTCAGCATCCATCTCCGAGACAAGGTCGGGGATATGGGATGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
CDS-3UTR CCA 90 bp TGGACTTGGCTTGCCCAGGACAAGTCAGGACCCTGCAGGTACAATAGAAGAGATGCCGGAGATGGCGGGTaGCGAGCCAAGCCGCCGCCT +
Preference number: 4 (lower is better)
Translates to: WTWLAQDKSGPCRYNRRDAGDGG*RAKPPP
Trigger: AGGCGGCGGCTTGGCTCGCCACCCGCCATCTCCGGC...ATCTCTTCTATTGTACCTGCAGGGTCCTGACTTGTCCTGGGCAAGCCAAGTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
CDS-3UTR GCA 90 bp CCAAGGCTCTCGATTTTCTGTGGTAGAGTTGCGGGGGTTTCTTTCCGAGCGCGAAGCCAAGCCGCCGCCTaGTCGCCTCCCTCACTCACT +
Preference number: 4 (lower is better)
Translates to: PRLSIFCGRVAGVSFRARSQAAA*SPPSLT
Trigger: AGTGAGTGAGGGAGGCGAGCAGGCGGCGGCTTGGCT...TCGCGCTCGGAAAGAAACCCCCGCAACTCTACCACAGAAAATCGAGAGCCTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000468657.5
ENST00000471924.5
ENST00000489033.5
ENST00000622997.3
ENST00000623144.3
ENST00000623148.3
CDS-3UTR CCA 90 bp CGACTCAGTACTGAAGGGTTCAGGTACCACCGTTCCTCTACCAATTTGCAGGATGCCGGAGATGGCGGGTaGCGAGCCAAGCCGCCGCCT +
Preference number: 4 (lower is better)
Translates to: RLSTEGFRYHRSSTNLQDAGDGG*RAKPPP
Trigger: AGGCGGCGGCTTGGCTCGCCACCCGCCATCTCCGGC...ATCCTGCAAATTGGTAGAGGAACGGTGGTACCTGAACCCTTCAGTACTGAGTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000468657.5
ENST00000471924.5
ENST00000489033.5
ENST00000622997.3
ENST00000623144.3
ENST00000623148.3
CDS-3UTR CCA 90 bp AGGCCTGAAAAGGCAGTTGAAGTCAGCGCTGCAGAATCTTGGCACTTCCCAGGAACGCGGCTGGCAGTATaGCCGGAGATGGCGGGTGGC +
Preference number: 4 (lower is better)
Translates to: RPEKAVEVSAAESWHFPGTRLAV*PEMAGG
Trigger: GCCACCCGCCATCTCCGGCCATACTGCCAGCCGCGT...TCCTGGGAAGTGCCAAGATTCTGCAGCGCTGACTTCAACTGCCTTTTCAGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000471924.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
CDS-3UTR GCA 90 bp CAGTTGAAGTCAGCGCTGCAGAATCTTGGCACTTCCCAGGAGCAGAAGCAATGGAGCCAAGCCGCCGCCTaGTCGCCTCCCTCACTCACT +
Preference number: 4 (lower is better)
Translates to: QLKSALQNLGTSQEQKQWSQAAA*SPPSLT
Trigger: AGTGAGTGAGGGAGGCGAGCAGGCGGCGGCTTGGCT...CCATTGCTTCTGCTCCTGGGAAGTGCCAAGATTCTGCAGCGCTGACTTCAACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471924.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
CDS-3UTR CCA 90 bp TCAAGGAATCCTTGTACCTGTGGTAGAGTTGCGGGGGTTTCTTTCCGAGCGCGACAGTATGGCCGGAGATaGCGGGTGGCGAGCCAAGCC +
Preference number: 4 (lower is better)
Translates to: SRNPCTCGRVAGVSFRARQYGRR*RVASQA
Trigger: GGCTTGGCTCGCCACCCGCCATCTCCGGCCATACTG...TCGCGCTCGGAAAGAAACCCCCGCAACTCTACCACAGGTACAAGGATTCCTTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000482374.5
ENST00000495283.5
CDS-3UTR CCA 90 bp GGCAAGAGGCATCCTTGGCAGTCAGCTTTCGAAACAGCCCTAAGCTGCCTAAATACGCGGCTGGCAGTATaGCCGGAGATGGCGGGTGGC +
Preference number: 4 (lower is better)
Translates to: GKRHPWQSAFETALSCLNTRLAV*PEMAGG
Trigger: GCCACCCGCCATCTCCGGCCATACTGCCAGCCGCGT...ATTTAGGCAGCTTAGGGCTGTTTCGAAAGCTGACTGCCAAGGATGCCTCTTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
CDS-3UTR GCA 90 bp CTGAGGTACATAATGAGAAGCTGGGGGAGATGGAGCAATACAGCCAATTGGCCCAGCCAAGCCGCCGCCTaGTCGCCTCCCTCACTCACT +
Preference number: 4 (lower is better)
Translates to: LRYIMRSWGRWSNTANWPSQAAA*SPPSLT
Trigger: AGTGAGTGAGGGAGGCGAGCAGGCGGCGGCTTGGCT...GGGCCAATTGGCTGTATTGCTCCATCTCCCCCAGCTTCTCATTATGTACCTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
CDS-3UTR GCA 90 bp AGCAGCCCAAAGTCTAGGCCTGAAAAGGCAGTTGAAGTCAGCGCTGCAGAATCTAGCCAAGCCGCCGCCTaGTCGCCTCCCTCACTCACT +
Preference number: 4 (lower is better)
Translates to: SSPKSRPEKAVEVSAAESSQAAA*SPPSLT
Trigger: AGTGAGTGAGGGAGGCGAGCAGGCGGCGGCTTGGCT...AGATTCTGCAGCGCTGACTTCAACTGCCTTTTCAGGCCTAGACTTTGGGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000471924.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
CDS-3UTR CCA 90 bp AGAGTAAACGACTCAGTACTGAAGGGTTCAGGTACCACCGTTCCTCTACCAATTGCCGGAGATGGCGGGTaGCGAGCCAAGCCGCCGCCT +
Preference number: 4 (lower is better)
Translates to: RVNDSVLKGSGTTVPLPIAGDGG*RAKPPP
Trigger: AGGCGGCGGCTTGGCTCGCCACCCGCCATCTCCGGC...AATTGGTAGAGGAACGGTGGTACCTGAACCCTTCAGTACTGAGTCGTTTACTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000468657.5
ENST00000471924.5
ENST00000489033.5
ENST00000622997.3
ENST00000623144.3
ENST00000623148.3
CDS-3UTR CCA 90 bp AGCAGCCCAAAGTCTAGGCCTGAAAAGGCAGTTGAAGTCAGCGCTGCAGAATCTCAGTATGGCCGGAGATaGCGGGTGGCGAGCCAAGCC +
Preference number: 4 (lower is better)
Translates to: SSPKSRPEKAVEVSAAESQYGRR*RVASQA
Trigger: GGCTTGGCTCGCCACCCGCCATCTCCGGCCATACTG...AGATTCTGCAGCGCTGACTTCAACTGCCTTTTCAGGCCTAGACTTTGGGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000471924.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
CDS-3UTR CCA 90 bp GCTGCATCTGTGGCACATAGACCATGGAGTGCCAGTAGCTGTGGTAATAGCACTCAGTATGGCCGGAGATaGCGGGTGGCGAGCCAAGCC +
Preference number: 4 (lower is better)
Translates to: AASVAHRPWSASSCGNSTQYGRR*RVASQA
Trigger: GGCTTGGCTCGCCACCCGCCATCTCCGGCCATACTG...AGTGCTATTACCACAGCTACTGGCACTCCATGGTCTATGTGCCACAGATGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
CDS-3UTR TCA 90 bp TCTAAAGCAGAGAACCATGTGCCTTCAAAACTGATATCACAGAATGCAACTGGCGGGGACGACGCGCGCTaGGGAGAGGAACCGCGCGGG +
Preference number: 4 (lower is better)
Translates to: SKAENHVPSKLISQNATGGDDAR*GEEPRG
Trigger: CCCGCGCGGTTCCTCTCCTCAGCGCGCGTCGTCCCC...GCCAGTTGCATTCTGTGATATCAGTTTTGAAGGCACATGGTTCTCTGCTTTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436609.5
CDS-3UTR CCA 90 bp GCAGAGAACCATGTGCCTTCAAAACTGATATCACAGAATGCAACTGGCTTCAGAGCCGGAGATGGCGGGTaGCGAGCCAAGCCGCCGCCT +
Preference number: 4 (lower is better)
Translates to: AENHVPSKLISQNATGFRAGDGG*RAKPPP
Trigger: AGGCGGCGGCTTGGCTCGCCACCCGCCATCTCCGGC...TCTGAAGCCAGTTGCATTCTGTGATATCAGTTTTGAAGGCACATGGTTCTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251943.8
ENST00000610588.4
ENST00000621367.4
CDS-3UTR CCA 90 bp TACAATAGAAGAGATGACCCTCTTTGTGTAGCTGCTTTGCCAGTTCCAGCTGATGCCGGAGATGGCGGGTaGCGAGCCAAGCCGCCGCCT +
Preference number: 4 (lower is better)
Translates to: YNRRDDPLCVAALPVPADAGDGG*RAKPPP
Trigger: AGGCGGCGGCTTGGCTCGCCACCCGCCATCTCCGGC...ATCAGCTGGAACTGGCAAAGCAGCTACACAAAGAGGGTCATCTCTTCTATTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000468657.5
ENST00000471924.5
ENST00000482374.5
ENST00000489033.5
ENST00000495283.5
ENST00000622997.3
ENST00000623144.3
ENST00000623148.3
CDS-3UTR CCA 90 bp CGACTCAGTACTGAAGGGTTCAGGTACCACCGTTCCTCTACCAATTTGCAGGATCAGTATGGCCGGAGATaGCGGGTGGCGAGCCAAGCC +
Preference number: 4 (lower is better)
Translates to: RLSTEGFRYHRSSTNLQDQYGRR*RVASQA
Trigger: GGCTTGGCTCGCCACCCGCCATCTCCGGCCATACTG...ATCCTGCAAATTGGTAGAGGAACGGTGGTACCTGAACCCTTCAGTACTGAGTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000468657.5
ENST00000471924.5
ENST00000489033.5
ENST00000622997.3
ENST00000623144.3
ENST00000623148.3
CDS-3UTR CCA 90 bp CACCGTTCCTCTACCAATTTGCAGGATAAGTCGGTTGTAACCAAGGCTCTCGATACGCGGCTGGCAGTATaGCCGGAGATGGCGGGTGGC +
Preference number: 4 (lower is better)
Translates to: HRSSTNLQDKSVVTKALDTRLAV*PEMAGG
Trigger: GCCACCCGCCATCTCCGGCCATACTGCCAGCCGCGT...ATCGAGAGCCTTGGTTACAACCGACTTATCCTGCAAATTGGTAGAGGAACGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000468657.5
ENST00000471924.5
ENST00000489033.5
ENST00000622997.3
ENST00000623144.3
ENST00000623148.3
CDS-3UTR CCA 90 bp CTTTCCTTGGGATCTCCCAACCGTTCCAGGTATTTCTCAAAAGATCCCTCCACAACGCGGCTGGCAGTATaGCCGGAGATGGCGGGTGGC +
Preference number: 4 (lower is better)
Translates to: LSLGSPNRSRYFSKDPSTTRLAV*PEMAGG
Trigger: GCCACCCGCCATCTCCGGCCATACTGCCAGCCGCGT...TGTGGAGGGATCTTTTGAGAAATACCTGGAACGGTTGGGAGATCCCAAGGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
CDS-3UTR TCA 90 bp CTAGGCCTGAAAAGGCAGTTGAAGTCAGCGCTGCAGAATCTTGGCACTTCCCAGCCGACACACACGCAATaGGGTCGTCAAAGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: LGLKRQLKSALQNLGTSQPTHTQ*GRQSWW
Trigger: CCACCAGCTTTGACGACCTCATTGCGTGTGTGTCGG...CTGGGAAGTGCCAAGATTCTGCAGCGCTGACTTCAACTGCCTTTTCAGGCCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000486353.5
ENST00000495283.5
ENST00000623144.3
ENST00000624161.3
CDS-3UTR TCA 90 bp GGAATAATCTGGCACAACCGGAAGGCAGGAGTCAAAACCTGGCAAAGGTGGCTGCCGACACACACGCAATaGGGTCGTCAAAGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: GIIWHNRKAGVKTWQRWLPTHTQ*GRQSWW
Trigger: CCACCAGCTTTGACGACCTCATTGCGTGTGTGTCGG...CAGCCACCTTTGCCAGGTTTTGACTCCTGCCTTCCGGTTGTGCCAGATTATTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR TCA 90 bp AAGAGGCAAGAGGCATCCTTGGCAGTCAGCTTTCGAAACAGCCCTAAGCTGCCTGCATGGATAGGATGGTaGGGCAATCACTGGCCTGCC +
Preference number: 4 (lower is better)
Translates to: KRQEASLAVSFRNSPKLPAWIGW*GNHWPA
Trigger: GGCAGGCCAGTGATTGCCTCACCATCCTATCCATGC...AGGCAGCTTAGGGCTGTTTCGAAAGCTGACTGCCAAGGATGCCTCTTGCCTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623148.3
CDS-3UTR GCA 90 bp CCAAGTTGGCTTCCTCCTGCTACCCAGAGTATTTCTTTGTCACCACCTTCTACCCCTCCCTCACTCACTTaGAGACTGTCGGGCGCCGAC +
Preference number: 4 (lower is better)
Translates to: PSWLPPATQSISLSPPSTPPSLT*RLSGAD
Trigger: GTCGGCGCCCGACAGTCTGCAAGTGAGTGAGGGAGG...GGTAGAAGGTGGTGACAAAGAAATACTCTGGGTAGCAGGAGGAAGCCAACTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471924.5
CDS-3UTR GCA 90 bp CAGGAGCAGAAGCAATGGACTTGGCTTGCCCAGGACAAGTCAGGACCCTGCAGGACAAGGGCTTGCTTATaGAGGTATCCGGAAAGCAGC +
Preference number: 4 (lower is better)
Translates to: QEQKQWTWLAQDKSGPCRTRACL*RYPESS
Trigger: GCTGCTTTCCGGATACCTGCATAAGCAAGCCCTTGT...CCTGCAGGGTCCTGACTTGTCCTGGGCAAGCCAAGTCCATTGCTTCTGCTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR CCA 90 bp GGCTTCCTCCTGCTACCCAGAGTATTTCTTTGTCACCACCTTCTACCACTAGTACAGTATGGCCGGAGATaGCGGGTGGCGAGCCAAGCC +
Preference number: 4 (lower is better)
Translates to: GFLLLPRVFLCHHLLPLVQYGRR*RVASQA
Trigger: GGCTTGGCTCGCCACCCGCCATCTCCGGCCATACTG...TACTAGTGGTAGAAGGTGGTGACAAAGAAATACTCTGGGTAGCAGGAGGAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471924.5
CDS-3UTR CCA 90 bp CAGGAGCAGAAGCAATGGACTTGGCTTGCCCAGGACAAGTCAGGACCCTGCAGGCAGAAGCAATGGACTTaGCTTGCCCAGGACAAGTCA +
Preference number: 4 (lower is better)
Translates to: QEQKQWTWLAQDKSGPCRQKQWT*LAQDKS
Trigger: TGACTTGTCCTGGGCAAGCCAAGTCCATTGCTTCTG...CCTGCAGGGTCCTGACTTGTCCTGGGCAAGCCAAGTCCATTGCTTCTGCTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR TCA 90 bp TGTACCTGTGGTAGAGTTGCGGGGGTTTCTTTCCGAGCGCGACGGTCAGGCAAGCTTCCTGCACCTGCGTaGCTAATAACAAGATCTGCT +
Preference number: 4 (lower is better)
Translates to: CTCGRVAGVSFRARRSGKLPAPA*LITRSA
Trigger: AGCAGATCTTGTTATTAGTCACGCAGGTGCAGGAAG...CTTGCCTGACCGTCGCGCTCGGAAAGAAACCCCCGCAACTCTACCACAGGTACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000482374.5
ENST00000495283.5
CDS-3UTR TCA 90 bp AGGCCTGAAAAGGCAGTTGAAGTCAGCGCTGCAGAATCTTGGCACTTCCCAGGACAAAGTCTGTTTGCCTaGGCTATGTCCCCGCCTTCC +
Preference number: 4 (lower is better)
Translates to: RPEKAVEVSAAESWHFPGQSLFA*AMSPPS
Trigger: GGAAGGCGGGGACATAGCTCAGGCAAACAGACTTTG...TCCTGGGAAGTGCCAAGATTCTGCAGCGCTGACTTCAACTGCCTTTTCAGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR TCA 90 bp TCAGCGCTGCAGAATCTTGGCACTTCCCAGGAGCAGAAGCAATGGACTTGGCTTCAAAGTCTGTTTGCCTaGGCTATGTCCCCGCCTTCC +
Preference number: 4 (lower is better)
Translates to: SALQNLGTSQEQKQWTWLQSLFA*AMSPPS
Trigger: GGAAGGCGGGGACATAGCTCAGGCAAACAGACTTTG...AAGCCAAGTCCATTGCTTCTGCTCCTGGGAAGTGCCAAGATTCTGCAGCGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR TCA 90 bp GGCCATTGCCCTCCTCTAAATTCAAAGTCTGTTTGCCTGAGCTATGTCCCCGCCCAAAGTCTGTTTGCCTaGGCTATGTCCCCGCCTTCC +
Preference number: 4 (lower is better)
Translates to: GHCPPLNSKSVCLSYVPAQSLFA*AMSPPS
Trigger: GGAAGGCGGGGACATAGCTCAGGCAAACAGACTTTG...GGCGGGGACATAGCTCAGGCAAACAGACTTTGAATTTAGAGGAGGGCAATGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR GCA 90 bp CACCGTTCCTCTACCAATTTGCAGGATAAGTCGGTTGTAACCAAGGCTCTCGATCCTCCCTCACTCACTTaGAGACTGTCGGGCGCCGAC +
Preference number: 4 (lower is better)
Translates to: HRSSTNLQDKSVVTKALDPPSLT*RLSGAD
Trigger: GTCGGCGCCCGACAGTCTGCAAGTGAGTGAGGGAGG...ATCGAGAGCCTTGGTTACAACCGACTTATCCTGCAAATTGGTAGAGGAACGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000468657.5
ENST00000471924.5
ENST00000489033.5
ENST00000622997.3
ENST00000623144.3
ENST00000623148.3
CDS-3UTR CCA 90 bp CATCAACTTTTCGTTTATAACCACTACGAGTGGCTTTCCTTTTTCCAGAGTCTCGCCGGAGATGGCGGGTaGCGAGCCAAGCCGCCGCCT +
Preference number: 4 (lower is better)
Translates to: HQLFVYNHYEWLSFFQSLAGDGG*RAKPPP
Trigger: AGGCGGCGGCTTGGCTCGCCACCCGCCATCTCCGGC...GAGACTCTGGAAAAAGGAAAGCCACTCGTAGTGGTTATAAACGAAAAGTTGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000468657.5
ENST00000471924.5
ENST00000482374.5
ENST00000489033.5
ENST00000495283.5
ENST00000622997.3
ENST00000623144.3
ENST00000623148.3
CDS-3UTR CCA 90 bp CGTTCCTCTACCAATTTGCAGGATAAGTCGGTTGTAACCAAGGCTCTCGATTTTACGCGGCTGGCAGTATaGCCGGAGATGGCGGGTGGC +
Preference number: 4 (lower is better)
Translates to: RSSTNLQDKSVVTKALDFTRLAV*PEMAGG
Trigger: GCCACCCGCCATCTCCGGCCATACTGCCAGCCGCGT...AAAATCGAGAGCCTTGGTTACAACCGACTTATCCTGCAAATTGGTAGAGGAACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000468657.5
ENST00000471924.5
ENST00000489033.5
ENST00000622997.3
ENST00000623144.3
ENST00000623148.3
CDS-3UTR CCA 90 bp AAGAGGCAAGAGGCATCCTTGGCAGTCAGCTTTCGAAACAGCCCTAAGCTGCCTCAGGAGCAGAAGCAATaGACTTGGCTTGCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: KRQEASLAVSFRNSPKLPQEQKQ*TWLAQD
Trigger: GTCCTGGGCAAGCCAAGTCCATTGCTTCTGCTCCTG...AGGCAGCTTAGGGCTGTTTCGAAAGCTGACTGCCAAGGATGCCTCTTGCCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000486353.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000624881.3
CDS-3UTR CCA 90 bp CCTGAAAAGGCAGTTGAAGTCAGCGCTGCAGAATCTTGGCACTTCCCAGGAGCAGGCCAGCACTTTCCTTaGGATCTCCCAACCGTTCCA +
Preference number: 4 (lower is better)
Translates to: PEKAVEVSAAESWHFPGAGQHFP*DLPTVP
Trigger: TGGAACGGTTGGGAGATCCCAAGGAAAGTGCTGGCC...TGCTCCTGGGAAGTGCCAAGATTCTGCAGCGCTGACTTCAACTGCCTTTTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR CCA 90 bp TGCAAAACAACTGCTCCGAAATGGCCCGAAAGAGGCAAGAGGCATCCTTGGCAGGGCCAGCACTTTCCTTaGGATCTCCCAACCGTTCCA +
Preference number: 4 (lower is better)
Translates to: CKTTAPKWPERGKRHPWQGQHFP*DLPTVP
Trigger: TGGAACGGTTGGGAGATCCCAAGGAAAGTGCTGGCC...CTGCCAAGGATGCCTCTTGCCTCTTTCGGGCCATTTCGGAGCAGTTGTTTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR CCA 90 bp ATGGACCTGGCTGCAAAACAACTGCTCCGAAATGGCCCGAAAGAGGCAAGAGGCACCGAGATGAATTCCTaGGCATCCCATATCCCCGAC +
Preference number: 4 (lower is better)
Translates to: MDLAAKQLLRNGPKEARGTEMNS*ASHIPD
Trigger: GTCGGGGATATGGGATGCCCAGGAATTCATCTCGGT...GCCTCTTGCCTCTTTCGGGCCATTTCGGAGCAGTTGTTTTGCAGCCAGGTCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR CCA 90 bp ATGGACCTGGCTGCAAAACAACTGCTCCGAAATGGCCCGAAAGAGGCAAGAGGCGCAGGAGTCAAAACCTaGCAAAGGTGGCTGCCCATA +
Preference number: 4 (lower is better)
Translates to: MDLAAKQLLRNGPKEARGAGVKT*QRWLPI
Trigger: TATGGGCAGCCACCTTTGCCAGGTTTTGACTCCTGC...GCCTCTTGCCTCTTTCGGGCCATTTCGGAGCAGTTGTTTTGCAGCCAGGTCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR CCA 90 bp ACAACTGCTCCGAAATGGCCCGAAAGAGGCAAGAGGCATCCTTGGCAGTCAGCTGCAGGAGTCAAAACCTaGCAAAGGTGGCTGCCCATA +
Preference number: 4 (lower is better)
Translates to: TTAPKWPERGKRHPWQSAAGVKT*QRWLPI
Trigger: TATGGGCAGCCACCTTTGCCAGGTTTTGACTCCTGC...AGCTGACTGCCAAGGATGCCTCTTGCCTCTTTCGGGCCATTTCGGAGCAGTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
3UTR CAA 72 bp CGGAAAGCAGCCCAAAGTCTAGGCCTGAAAAGGCAGTaGAAGTCAGCGCTGCAGAATCTTGGCACTTCCCAG +
Preference number: 4 (lower is better)
Translates to: RKAAQSLGLKRQ*KSALQNLGTSQ
Trigger: CTGGGAAGTGCCAAGATTCTGCAGCGCTGACTTCAACTGCCTTTTCAGGCCTAGACTTTGGGCTGCTTTCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000471924.5
ENST00000486353.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
3UTR CAA 72 bp CAGGGTGCAGGTAGGATGGGTAGCAGTAACAAGGGCTaGCTTATGCAGGTATCCGGAAAGCAGCCCAAAGTC +
Preference number: 4 (lower is better)
Translates to: QGAGRMGSSNKG*LMQVSGKQPKV
Trigger: GACTTTGGGCTGCTTTCCGGATACCTGCATAAGCAAGCCCTTGTTACTGCTACCCATCCTACCTGCACCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000486353.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR TCA 90 bp CGACTCAGTACTGAAGGGTTCAGGTACCACCGTTCCTCTACCAATTTGCAGGATCCGACACACACGCAATaGGGTCGTCAAAGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: RLSTEGFRYHRSSTNLQDPTHTQ*GRQSWW
Trigger: CCACCAGCTTTGACGACCTCATTGCGTGTGTGTCGG...ATCCTGCAAATTGGTAGAGGAACGGTGGTACCTGAACCCTTCAGTACTGAGTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000468657.5
ENST00000489033.5
ENST00000622997.3
ENST00000623144.3
CDS-3UTR TCA 90 bp GCTGCATCTGTGGCACATAGACCATGGAGTGCCAGTAGCTGTGGTAATAGCACTCAAAGTCTGTTTGCCTaGGCTATGTCCCCGCCTTCC +
Preference number: 4 (lower is better)
Translates to: AASVAHRPWSASSCGNSTQSLFA*AMSPPS
Trigger: GGAAGGCGGGGACATAGCTCAGGCAAACAGACTTTG...AGTGCTATTACCACAGCTACTGGCACTCCATGGTCTATGTGCCACAGATGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR TCA 90 bp GGCTTCCTCCTGCTACCCAGAGTATTTCTTTGTCACCACCTTCTACCACTAGTACCACGCACGTTGCAGTaGCTGCCTTCTGTGAGGGAG +
Preference number: 4 (lower is better)
Translates to: GFLLLPRVFLCHHLLPLVPRTLQ*LPSVRE
Trigger: CTCCCTCACAGAAGGCAGTCACTGCAACGTGCGTGG...TACTAGTGGTAGAAGGTGGTGACAAAGAAATACTCTGGGTAGCAGGAGGAAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371979.7
CDS-3UTR TCA 90 bp AGAGAACCATGTGCCTTCAAAACTGATATCACAGAATGCAACTGGCTTCAGATAGAAGGAGCCGGGCTCTaGGGCGAGCTCGGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: REPCAFKTDITECNWLQIEGAGL*GELGWL
Trigger: GAGCCAGCCGAGCTCGCCTCAGAGCCCGGCTCCTTC...TATCTGAAGCCAGTTGCATTCTGTGATATCAGTTTTGAAGGCACATGGTTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436609.5
CDS-3UTR GCA 90 bp CTGCTTTCTGAATGTCTTCTTTCAAGGAATCCTTGTACCTGTGGTAGAGTTGCGAGCCAAGCCGCCGCCTaGTCGCCTCCCTCACTCACT +
Preference number: 4 (lower is better)
Translates to: LLSECLLSRNPCTCGRVASQAAA*SPPSLT
Trigger: AGTGAGTGAGGGAGGCGAGCAGGCGGCGGCTTGGCT...CGCAACTCTACCACAGGTACAAGGATTCCTTGAAAGAAGACATTCAGAAAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482374.5
ENST00000495283.5
CDS-3UTR GCA 90 bp CGTTCCTCTACCAATTTGCAGGATAAGTCGGTTGTAACCAAGGCTCTCGATTTTAGCCAAGCCGCCGCCTaGTCGCCTCCCTCACTCACT +
Preference number: 4 (lower is better)
Translates to: RSSTNLQDKSVVTKALDFSQAAA*SPPSLT
Trigger: AGTGAGTGAGGGAGGCGAGCAGGCGGCGGCTTGGCT...AAAATCGAGAGCCTTGGTTACAACCGACTTATCCTGCAAATTGGTAGAGGAACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000468657.5
ENST00000471924.5
ENST00000489033.5
ENST00000622997.3
ENST00000623144.3
ENST00000623148.3
CDS-3UTR GCA 90 bp TGTACCTGTGGTAGAGTTGCGGGGGTTTCTTTCCGAGCGCGACGGTCAGGCAAGACAGCTTCCTGCACCTaGGTGACTAATAACAAGATC +
Preference number: 4 (lower is better)
Translates to: CTCGRVAGVSFRARRSGKTASCT*VTNNKI
Trigger: GATCTTGTTATTAGTCACGCAGGTGCAGGAAGCTGT...CTTGCCTGACCGTCGCGCTCGGAAAGAAACCCCCGCAACTCTACCACAGGTACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000482374.5
ENST00000495283.5
CDS-3UTR GCA 90 bp ACTGCTCCGAAATGGCCCGAAAGAGGCAAGAGGCATCCTTGGCAGTCAGCTTTCACAAGGGCTTGCTTATaGAGGTATCCGGAAAGCAGC +
Preference number: 4 (lower is better)
Translates to: TAPKWPERGKRHPWQSAFTRACL*RYPESS
Trigger: GCTGCTTTCCGGATACCTGCATAAGCAAGCCCTTGT...GAAAGCTGACTGCCAAGGATGCCTCTTGCCTCTTTCGGGCCATTTCGGAGCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000486353.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000624881.3
CDS-3UTR GCA 90 bp TTGAAGTCAGCGCTGCAGAATCTTGGCACTTCCCAGGAGCAGAAGCAATGGACTAGGAATCCTTGTACTTaGAGACTGTCGGGCGCCGAC +
Preference number: 4 (lower is better)
Translates to: LKSALQNLGTSQEQKQWTRNPCT*RLSGAD
Trigger: GTCGGCGCCCGACAGTCTGCAAGTACAAGGATTCCT...AGTCCATTGCTTCTGCTCCTGGGAAGTGCCAAGATTCTGCAGCGCTGACTTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624161.3
CDS-3UTR CCA 90 bp TACAATAGAAGAGATGACCCTCTTTGTGTAGCTGCTTTGCCAGTTCCAGCTGATCAGTATGGCCGGAGATaGCGGGTGGCGAGCCAAGCC +
Preference number: 4 (lower is better)
Translates to: YNRRDDPLCVAALPVPADQYGRR*RVASQA
Trigger: GGCTTGGCTCGCCACCCGCCATCTCCGGCCATACTG...ATCAGCTGGAACTGGCAAAGCAGCTACACAAAGAGGGTCATCTCTTCTATTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000468657.5
ENST00000471924.5
ENST00000482374.5
ENST00000489033.5
ENST00000495283.5
ENST00000622997.3
ENST00000623144.3
ENST00000623148.3
CDS-3UTR CCA 90 bp TCTAAAGCAGAGAACCATGTGCCTTCAAAACTGATATCACAGAATGCAACTGGCACGCGGCTGGCAGTATaGCCGGAGATGGCGGGTGGC +
Preference number: 4 (lower is better)
Translates to: SKAENHVPSKLISQNATGTRLAV*PEMAGG
Trigger: GCCACCCGCCATCTCCGGCCATACTGCCAGCCGCGT...GCCAGTTGCATTCTGTGATATCAGTTTTGAAGGCACATGGTTCTCTGCTTTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251943.8
ENST00000610588.4
ENST00000621367.4
CDS-3UTR CCA 90 bp GCTGCAAAACAACTGCTCCGAAATGGCCCGAAAGAGGCAAGAGGCATCCTTGGCCAGAAGCAATGGACTTaGCTTGCCCAGGACAAGTCA +
Preference number: 4 (lower is better)
Translates to: AAKQLLRNGPKEARGILGQKQWT*LAQDKS
Trigger: TGACTTGTCCTGGGCAAGCCAAGTCCATTGCTTCTG...GCCAAGGATGCCTCTTGCCTCTTTCGGGCCATTTCGGAGCAGTTGTTTTGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000486353.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000624881.3
CDS-3UTR CCA 90 bp ATGGACCTGGCTGCAAAACAACTGCTCCGAAATGGCCCGAAAGAGGCAAGAGGCCAGAAGCAATGGACTTaGCTTGCCCAGGACAAGTCA +
Preference number: 4 (lower is better)
Translates to: MDLAAKQLLRNGPKEARGQKQWT*LAQDKS
Trigger: TGACTTGTCCTGGGCAAGCCAAGTCCATTGCTTCTG...GCCTCTTGCCTCTTTCGGGCCATTTCGGAGCAGTTGTTTTGCAGCCAGGTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000486353.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000624881.3
CDS-3UTR CCA 90 bp GGCAAGAGGCATCCTTGGCAGTCAGCTTTCGAAACAGCCCTAAGCTGCCTAAATCAGGAGCAGAAGCAATaGACTTGGCTTGCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: GKRHPWQSAFETALSCLNQEQKQ*TWLAQD
Trigger: GTCCTGGGCAAGCCAAGTCCATTGCTTCTGCTCCTG...ATTTAGGCAGCTTAGGGCTGTTTCGAAAGCTGACTGCCAAGGATGCCTCTTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000486353.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000624881.3
CDS-3UTR CCA 90 bp GACCTGGCTGCAAAACAACTGCTCCGAAATGGCCCGAAAGAGGCAAGAGGCATCGGCAAGAGGCATCCTTaGCAGTCAGCTTTCGAAACA +
Preference number: 4 (lower is better)
Translates to: DLAAKQLLRNGPKEARGIGKRHP*QSAFET
Trigger: TGTTTCGAAAGCTGACTGCCAAGGATGCCTCTTGCC...GATGCCTCTTGCCTCTTTCGGGCCATTTCGGAGCAGTTGTTTTGCAGCCAGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000486353.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000624881.3
CDS-3UTR CCA 90 bp TTGCCTGAGCTATGTCCCCGCCTTCCAACACAGTATCCTGAAGTAGCAGGAACCACAACTGCTCCGAAATaGCCCGAAAGAGGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: LPELCPRLPTQYPEVAGTTTAPK*PERGKR
Trigger: CCTCTTGCCTCTTTCGGGCCATTTCGGAGCAGTTGT...GGTTCCTGCTACTTCAGGATACTGTGTTGGAAGGCGGGGACATAGCTCAGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR CCA 90 bp AACAACTGCTCCGAAATGGCCCGAAAGAGGCAAGAGGCATCCTTGGCAGTCAGCGCTCTTATTTCCAGCTaGCCAGCACTTTCCTTGGGA +
Preference number: 4 (lower is better)
Translates to: NNCSEMARKRQEASLAVSALISS*PALSLG
Trigger: TCCCAAGGAAAGTGCTGGCCAGCTGGAAATAAGAGC...GCTGACTGCCAAGGATGCCTCTTGCCTCTTTCGGGCCATTTCGGAGCAGTTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR CCA 90 bp TCAGCGCTGCAGAATCTTGGCACTTCCCAGGAGCAGAAGCAATGGACTTGGCTTTTTCTTCCAAGCCCCTaGGCATCTGTCCATTCCCTG +
Preference number: 4 (lower is better)
Translates to: SALQNLGTSQEQKQWTWLFLPSP*ASVHSL
Trigger: CAGGGAATGGACAGATGCCCAGGGGCTTGGAAGAAA...AAGCCAAGTCCATTGCTTCTGCTCCTGGGAAGTGCCAAGATTCTGCAGCGCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR CCA 90 bp AAATGGCCCGAAAGAGGCAAGAGGCATCCTTGGCAGTCAGCTTTCGAAACAGCCGTGGCACATAGACCATaGAGTGCCAGTAGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: KWPERGKRHPWQSAFETAVAHRP*SASSCG
Trigger: ACCACAGCTACTGGCACTCCATGGTCTATGTGCCAC...GGCTGTTTCGAAAGCTGACTGCCAAGGATGCCTCTTGCCTCTTTCGGGCCATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR CCA 90 bp GGCCATTGCCCTCCTCTAAATTCAAAGTCTGTTTGCCTGAGCTATGTCCCCGCCGCAGGAGTCAAAACCTaGCAAAGGTGGCTGCCCATA +
Preference number: 4 (lower is better)
Translates to: GHCPPLNSKSVCLSYVPAAGVKT*QRWLPI
Trigger: TATGGGCAGCCACCTTTGCCAGGTTTTGACTCCTGC...GGCGGGGACATAGCTCAGGCAAACAGACTTTGAATTTAGAGGAGGGCAATGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR CCA 90 bp CAACTGCTCCGAAATGGCCCGAAAGAGGCAAGAGGCATCCTTGGCAGTCAGCTTAGAAGCTGGGGGAGATaGAGCAATACAGCCAATTGG +
Preference number: 4 (lower is better)
Translates to: QLLRNGPKEARGILGSQLRSWGR*SNTANW
Trigger: CCAATTGGCTGTATTGCTCCATCTCCCCCAGCTTCT...AAGCTGACTGCCAAGGATGCCTCTTGCCTCTTTCGGGCCATTTCGGAGCAGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
3UTR CAA 72 bp AAGGTGGAGGTGGTAGTGGTGGTGGTGGTTGTAAGTTaGAAGTCTCTCCCACATCAAGAGCAGGAGGAGGAG +
Preference number: 4 (lower is better)
Translates to: KVEVVVVVVVVS*KSLPHQEQEEE
Trigger: CTCCTCCTCCTGCTCTTGATGTGGGAGAGACTTCAAACTTACAACCACCACCACCACTACCACCTCCACCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470971.5
ENST00000623148.3
CDS-3UTR TCA 90 bp ACTTTCCTTGGGATCTCCCAACCGTTCCAGGTATTTCTCAAAAGATCCCTCCACCCGACACACACGCAATaGGGTCGTCAAAGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: TFLGISQPFQVFLKRSLHPTHTQ*GRQSWW
Trigger: CCACCAGCTTTGACGACCTCATTGCGTGTGTGTCGG...GTGGAGGGATCTTTTGAGAAATACCTGGAACGGTTGGGAGATCCCAAGGAAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000624161.3
ENST00000624881.3
CDS-3UTR TCA 90 bp CCAAGGCTCTCGATTTTCTGTGGTAGAGTTGCGGGGGTTTCTTTCCGAGCGCGACTTCCTGCACCTGCGTaGCTAATAACAAGATCTGCT +
Preference number: 4 (lower is better)
Translates to: PRLSIFCGRVAGVSFRARLPAPA*LITRSA
Trigger: AGCAGATCTTGTTATTAGTCACGCAGGTGCAGGAAG...TCGCGCTCGGAAAGAAACCCCCGCAACTCTACCACAGAAAATCGAGAGCCTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000468657.5
ENST00000471924.5
ENST00000622997.3
ENST00000623144.3
CDS-3UTR TCA 90 bp GTCAGCGCTGCAGAATCTTGGCACTTCCCAGGAGCAGAAGCAATGGACTTGGCTTCGTACAATACAGCCTaGCAAACAGCTGCACTTGAC +
Preference number: 4 (lower is better)
Translates to: VSAAESWHFPGAEAMDLASYNTA*QTAALD
Trigger: GTCAAGTGCAGCTGTTTGTCAGGCTGTATTGTACGA...AGCCAAGTCCATTGCTTCTGCTCCTGGGAAGTGCCAAGATTCTGCAGCGCTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR TCA 90 bp CCTGGCTGCAAAACAACTGCTCCGAAATGGCCCGAAAGAGGCAAGAGGCATCCTTCGTACAATACAGCCTaGCAAACAGCTGCACTTGAC +
Preference number: 4 (lower is better)
Translates to: PGCKTTAPKWPERGKRHPSYNTA*QTAALD
Trigger: GTCAAGTGCAGCTGTTTGTCAGGCTGTATTGTACGA...AGGATGCCTCTTGCCTCTTTCGGGCCATTTCGGAGCAGTTGTTTTGCAGCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR TCA 90 bp AATCTGGCACAACCGGAAGGCAGGAGTCAAAACCTGGCAAAGGTGGCTGCCCATTCGTACAATACAGCCTaGCAAACAGCTGCACTTGAC +
Preference number: 4 (lower is better)
Translates to: NLAQPEGRSQNLAKVAAHSYNTA*QTAALD
Trigger: GTCAAGTGCAGCTGTTTGTCAGGCTGTATTGTACGA...ATGGGCAGCCACCTTTGCCAGGTTTTGACTCCTGCCTTCCGGTTGTGCCAGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR TCA 90 bp AGGGTGCAGGTAGGATGGGTAGCAGTAACAAGGGCTTGCTTATGCAGGTATCCGAGAGAGGCACCAGCATaGGGAATAGCAGAATGGCAT +
Preference number: 4 (lower is better)
Translates to: RVQVGWVAVTRACLCRYPREAPA*GIAEWH
Trigger: ATGCCATTCTGCTATTCCTCATGCTGGTGCCTCTCT...CGGATACCTGCATAAGCAAGCCCTTGTTACTGCTACCCATCCTACCTGCACCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623148.3
CDS-3UTR GCA 90 bp TCTAAAGCAGAGAACCATGTGCCTTCAAAACTGATATCACAGAATGCAACTGGCAGCCAAGCCGCCGCCTaGTCGCCTCCCTCACTCACT +
Preference number: 4 (lower is better)
Translates to: SKAENHVPSKLISQNATGSQAAA*SPPSLT
Trigger: AGTGAGTGAGGGAGGCGAGCAGGCGGCGGCTTGGCT...GCCAGTTGCATTCTGTGATATCAGTTTTGAAGGCACATGGTTCTCTGCTTTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251943.8
ENST00000610588.4
ENST00000621367.4
CDS-3UTR GCA 90 bp TGCAAAACAACTGCTCCGAAATGGCCCGAAAGAGGCAAGAGGCATCCTTGGCAGACAAGGGCTTGCTTATaGAGGTATCCGGAAAGCAGC +
Preference number: 4 (lower is better)
Translates to: CKTTAPKWPERGKRHPWQTRACL*RYPESS
Trigger: GCTGCTTTCCGGATACCTGCATAAGCAAGCCCTTGT...CTGCCAAGGATGCCTCTTGCCTCTTTCGGGCCATTTCGGAGCAGTTGTTTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000486353.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000624881.3
CDS-3UTR GCA 90 bp ACTGCTCCGAAATGGCCCGAAAGAGGCAAGAGGCATCCTTGGCAGTCAGCTTTCGCAGTAACAAGGGCTTaGTTATGCAGGTATCCGGAA +
Preference number: 4 (lower is better)
Translates to: TAPKWPERGKRHPWQSAFAVTRA*LCRYPE
Trigger: TTCCGGATACCTGCATAAGCAAGCCCTTGTTACTGC...GAAAGCTGACTGCCAAGGATGCCTCTTGCCTCTTTCGGGCCATTTCGGAGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000486353.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000624881.3
CDS-3UTR GCA 90 bp TCAGCGCTGCAGAATCTTGGCACTTCCCAGGAGCAGAAGCAATGGACTTGGCTTGGGCCCGGCATGTTGTaGCTGTTTATAAACCGAGAT +
Preference number: 4 (lower is better)
Translates to: SALQNLGTSQEQKQWTWLGPGML*LFINRD
Trigger: ATCTCGGTTTATAAACAGGCACAACATGCCGGGCCC...AAGCCAAGTCCATTGCTTCTGCTCCTGGGAAGTGCCAAGATTCTGCAGCGCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR GCA 90 bp CCCGAAAGAGGCAAGAGGCATCCTTGGCAGTCAGCTTTCGAAACAGCCCTAAGCAATTCAAAGTCTGTTTaGCTGAGCTATGTCCCCGCC +
Preference number: 4 (lower is better)
Translates to: PERGKRHPWQSAFETALSNSKSV*LSYVPA
Trigger: GGCGGGGACATAGCTCAGGCAAACAGACTTTGAATT...GCTTAGGGCTGTTTCGAAAGCTGACTGCCAAGGATGCCTCTTGCCTCTTTCGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR GCA 90 bp GTCAGCGCTGCAGAATCTTGGCACTTCCCAGGAGCAGAAGCAATGGACTTGGCTAATTCAAAGTCTGTTTaGCTGAGCTATGTCCCCGCC +
Preference number: 4 (lower is better)
Translates to: VSAAESWHFPGAEAMDLANSKSV*LSYVPA
Trigger: GGCGGGGACATAGCTCAGGCAAACAGACTTTGAATT...AGCCAAGTCCATTGCTTCTGCTCCTGGGAAGTGCCAAGATTCTGCAGCGCTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR CCA 90 bp CACCGTTCCTCTACCAATTTGCAGGATAAGTCGGTTGTAACCAAGGCTCTCGATCAAACACGCACTTCATaGCGCGGGTTCCTCAAGCCC +
Preference number: 4 (lower is better)
Translates to: HRSSTNLQDKSVVTKALDQTRTS*RGFLKP
Trigger: GGGCTTGAGGAACCCGCGCCATGAAGTGCGTGTTTG...ATCGAGAGCCTTGGTTACAACCGACTTATCCTGCAAATTGGTAGAGGAACGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468657.5
ENST00000622997.3
CDS-3UTR CCA 90 bp ACTGTGCAAAAGACACCAATTCAATACAGTGCAGTAAAACACTTACATACATCCGCCGGAGATGGCGGGTaGCGAGCCAAGCCGCCGCCT +
Preference number: 4 (lower is better)
Translates to: TVQKTPIQYSAVKHLHTSAGDGG*RAKPPP
Trigger: AGGCGGCGGCTTGGCTCGCCACCCGCCATCTCCGGC...GGATGTATGTAAGTGTTTTACTGCACTGTATTGAATTGGTGTCTTTTGCACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251943.8
ENST00000610588.4
ENST00000621367.4
CDS-3UTR CCA 90 bp AATACAATGAAGTATGCTCAATATGGGGCTAGTTGTACATCCATCTCAATTTCCGCCGGAGATGGCGGGTaGCGAGCCAAGCCGCCGCCT +
Preference number: 4 (lower is better)
Translates to: NTMKYAQYGASCTSISISAGDGG*RAKPPP
Trigger: AGGCGGCGGCTTGGCTCGCCACCCGCCATCTCCGGC...GGAAATTGAGATGGATGTACAACTAGCCCCATATTGAGCATACTTCATTGTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000251943.8
ENST00000610588.4
ENST00000621367.4
ENST00000623144.3
ENST00000623148.3
CDS-3UTR CCA 90 bp TCTAAAGCAGAGAACCATGTGCCTTCAAAACTGATATCACAGAATGCAACTGGCCAGTATGGCCGGAGATaGCGGGTGGCGAGCCAAGCC +
Preference number: 4 (lower is better)
Translates to: SKAENHVPSKLISQNATGQYGRR*RVASQA
Trigger: GGCTTGGCTCGCCACCCGCCATCTCCGGCCATACTG...GCCAGTTGCATTCTGTGATATCAGTTTTGAAGGCACATGGTTCTCTGCTTTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251943.8
ENST00000610588.4
ENST00000621367.4
CDS-3UTR CCA 90 bp ATTTTTCTGGCTGGCCAGGAGGATAACATTTCAGTGTTGATAAGTCCATTGACTACGCGGCTGGCAGTATaGCCGGAGATGGCGGGTGGC +
Preference number: 4 (lower is better)
Translates to: IFLAGQEDNISVLISPLTTRLAV*PEMAGG
Trigger: GCCACCCGCCATCTCCGGCCATACTGCCAGCCGCGT...AGTCAATGGACTTATCAACACTGAAATGTTATCCTCCTGGCCAGCCAGAAAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000468657.5
ENST00000482374.5
ENST00000489033.5
CDS-3UTR CCA 90 bp TTCGAAACAGCCCTAAGCTGCCTAAATATTCATCCATTGATGCCTCATTCAAAGACGCGGCTGGCAGTATaGCCGGAGATGGCGGGTGGC +
Preference number: 4 (lower is better)
Translates to: FETALSCLNIHPLMPHSKTRLAV*PEMAGG
Trigger: GCCACCCGCCATCTCCGGCCATACTGCCAGCCGCGT...CTTTGAATGAGGCATCAATGGATGAATATTTAGGCAGCTTAGGGCTGTTTCGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
CDS-3UTR CCA 90 bp AGGAGCAGAAGCAATGGACTTGGCTTGCCCAGGACAAGTCAGGACCTTTTTAGACAGGAGCAGAAGCAATaGACTTGGCTTGCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: RSRSNGLGLPRTSQDLFRQEQKQ*TWLAQD
Trigger: GTCCTGGGCAAGCCAAGTCCATTGCTTCTGCTCCTG...TCTAAAAAGGTCCTGACTTGTCCTGGGCAAGCCAAGTCCATTGCTTCTGCTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000471924.5
ENST00000486353.5
CDS-3UTR CCA 90 bp GCCAGCACTTTCCTTGGGATCTCCCAACCGTTCCAGGTATTTCTCAAAAGATCCCAGGAGCAGAAGCAATaGACTTGGCTTGCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: ASTFLGISQPFQVFLKRSQEQKQ*TWLAQD
Trigger: GTCCTGGGCAAGCCAAGTCCATTGCTTCTGCTCCTG...GGATCTTTTGAGAAATACCTGGAACGGTTGGGAGATCCCAAGGAAAGTGCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR CCA 90 bp AGGATGGGTAGCAGTAACAAGGGCTTGCTTATGCAGGTATCCGGAAAGCAGCCCGGCAAGAGGCATCCTTaGCAGTCAGCTTTCGAAACA +
Preference number: 4 (lower is better)
Translates to: RMGSSNKGLLMQVSGKQPGKRHP*QSAFET
Trigger: TGTTTCGAAAGCTGACTGCCAAGGATGCCTCTTGCC...GGGCTGCTTTCCGGATACCTGCATAAGCAAGCCCTTGTTACTGCTACCCATCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000486353.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR CCA 90 bp CAACTGCTCCGAAATGGCCCGAAAGAGGCAAGAGGCATCCTTGGCAGTCAGCTTGCAGCACCTTTTACCTaGGCCTGGGTAAAAATCAAC +
Preference number: 4 (lower is better)
Translates to: QLLRNGPKEARGILGSQLAAPFT*AWVKIN
Trigger: GTTGATTTTTACCCAGGCCCAGGTAAAAGGTGCTGC...AAGCTGACTGCCAAGGATGCCTCTTGCCTCTTTCGGGCCATTTCGGAGCAGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR CCA 90 bp ATGGACCTGGCTGCAAAACAACTGCTCCGAAATGGCCCGAAAGAGGCAAGAGGCGCAGCACCTTTTACCTaGGCCTGGGTAAAAATCAAC +
Preference number: 4 (lower is better)
Translates to: MDLAAKQLLRNGPKEARGAAPFT*AWVKIN
Trigger: GTTGATTTTTACCCAGGCCCAGGTAAAAGGTGCTGC...GCCTCTTGCCTCTTTCGGGCCATTTCGGAGCAGTTGTTTTGCAGCCAGGTCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR CCA 90 bp TCTTCCAAGCCCCTGGGCATCTGTCCATTCCCTGGGGTAAATCCATACTGGGACCATCTGTCCATTCCCTaGGGTAAATCCATACTGGGA +
Preference number: 4 (lower is better)
Translates to: SSKPLGICPFPGVNPYWDHLSIP*GKSILG
Trigger: TCCCAGTATGGATTTACCCCAGGGAATGGACAGATG...GTCCCAGTATGGATTTACCCCAGGGAATGGACAGATGCCCAGGGGCTTGGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR CCA 90 bp CCTGAGGTACATAATGAGAAGCTGGGGGAGATGGAGCAATACAGCCAATTGGCCTTTCTTCCAAGCCCCTaGGCATCTGTCCATTCCCTG +
Preference number: 4 (lower is better)
Translates to: PEVHNEKLGEMEQYSQLAFLPSP*ASVHSL
Trigger: CAGGGAATGGACAGATGCCCAGGGGCTTGGAAGAAA...GGCCAATTGGCTGTATTGCTCCATCTCCCCCAGCTTCTCATTATGTACCTCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR CCA 90 bp AGCAGCCCAAAGTCTAGGCCTGAAAAGGCAGTTGAAGTCAGCGCTGCAGAATCTTTTCTTCCAAGCCCCTaGGCATCTGTCCATTCCCTG +
Preference number: 4 (lower is better)
Translates to: SSPKSRPEKAVEVSAAESFLPSP*ASVHSL
Trigger: CAGGGAATGGACAGATGCCCAGGGGCTTGGAAGAAA...AGATTCTGCAGCGCTGACTTCAACTGCCTTTTCAGGCCTAGACTTTGGGCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR CCA 90 bp CTGTGGCACATAGACCATGGAGTGCCAGTAGCTGTGGTAATAGCACTGCAATCCGTGGCACATAGACCATaGAGTGCCAGTAGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: LWHIDHGVPVAVVIALQSVAHRP*SASSCG
Trigger: ACCACAGCTACTGGCACTCCATGGTCTATGTGCCAC...GGATTGCAGTGCTATTACCACAGCTACTGGCACTCCATGGTCTATGTGCCACAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR CCA 90 bp GAAAAGGCAGTTGAAGTCAGCGCTGCAGAATCTTGGCACTTCCCAGGAGCAGAAGTGGCACATAGACCATaGAGTGCCAGTAGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: EKAVEVSAAESWHFPGAEVAHRP*SASSCG
Trigger: ACCACAGCTACTGGCACTCCATGGTCTATGTGCCAC...TTCTGCTCCTGGGAAGTGCCAAGATTCTGCAGCGCTGACTTCAACTGCCTTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR CCA 90 bp AGCAGCCCAAAGTCTAGGCCTGAAAAGGCAGTTGAAGTCAGCGCTGCAGAATCTGTGGCACATAGACCATaGAGTGCCAGTAGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: SSPKSRPEKAVEVSAAESVAHRP*SASSCG
Trigger: ACCACAGCTACTGGCACTCCATGGTCTATGTGCCAC...AGATTCTGCAGCGCTGACTTCAACTGCCTTTTCAGGCCTAGACTTTGGGCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR CCA 90 bp ATGAATTCCTGGGCATCCCATATCCCCGACCTTGTCTCGGAGATGGATGCTGAGAGAAGCTGGGGGAGATaGAGCAATACAGCCAATTGG +
Preference number: 4 (lower is better)
Translates to: MNSWASHIPDLVSEMDAERSWGR*SNTANW
Trigger: CCAATTGGCTGTATTGCTCCATCTCCCCCAGCTTCT...CTCAGCATCCATCTCCGAGACAAGGTCGGGGATATGGGATGCCCAGGAATTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR CCA 90 bp ATGGCCCGAAAGAGGCAAGAGGCATCCTTGGCAGTCAGCTTTCGAAACAGCCCTCAAATCACTGCCGCTTaGATCACAGGAATAAGGTGG +
Preference number: 4 (lower is better)
Translates to: MARKRQEASLAVSFRNSPQITAA*ITGIRW
Trigger: CCACCTTATTCCTGTGATCCAAGCGGCAGTGATTTG...AGGGCTGTTTCGAAAGCTGACTGCCAAGGATGCCTCTTGCCTCTTTCGGGCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623148.3
CDS-3UTR TCA 90 bp AGAGTAAACGACTCAGTACTGAAGGGTTCAGGTACCACCGTTCCTCTACCAATTCCGACACACACGCAATaGGGTCGTCAAAGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: RVNDSVLKGSGTTVPLPIPTHTQ*GRQSWW
Trigger: CCACCAGCTTTGACGACCTCATTGCGTGTGTGTCGG...AATTGGTAGAGGAACGGTGGTACCTGAACCCTTCAGTACTGAGTCGTTTACTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000468657.5
ENST00000489033.5
ENST00000622997.3
ENST00000623144.3
CDS-3UTR TCA 90 bp AAAACAACTGCTCCGAAATGGCCCGAAAGAGGCAAGAGGCATCCTTGGCAGTCAATTGCCAGCTGTCTGTaGGTAGTGCATTGGAGGATC +
Preference number: 4 (lower is better)
Translates to: KTTAPKWPERGKRHPWQSIASCL*VVHWRI
Trigger: GATCCTCCAATGCACTACTCACAGACAGCTGGCAAT...TGACTGCCAAGGATGCCTCTTGCCTCTTTCGGGCCATTTCGGAGCAGTTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR TCA 90 bp TCTTCCAAGCCCCTGGGCATCTGTCCATTCCCTGGGGTAAATCCATACTGGGACTCCAACACAGTATCCTaGAGTAGCAGGAACCATTGT +
Preference number: 4 (lower is better)
Translates to: SSKPLGICPFPGVNPYWDSNTVS*SSRNHC
Trigger: ACAATGGTTCCTGCTACTTCAGGATACTGTGTTGGA...GTCCCAGTATGGATTTACCCCAGGGAATGGACAGATGCCCAGGGGCTTGGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR TCA 90 bp CTGAAAAGGCAGTTGAAGTCAGCGCTGCAGAATCTTGGCACTTCCCAGGAGCAGGAGGTAACTGTGTCCTaGGGAGACATAGAACATGAC +
Preference number: 4 (lower is better)
Translates to: LKRQLKSALQNLGTSQEQEVTVS*GDIEHD
Trigger: GTCATGTTCTATGTCTCCTCAGGACACAGTTACCTC...CTGCTCCTGGGAAGTGCCAAGATTCTGCAGCGCTGACTTCAACTGCCTTTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR TCA 90 bp TTGCCTGAGCTATGTCCCCGCCTTCCAACACAGTATCCTGAAGTAGCAGGAACCGAGGTAACTGTGTCCTaGGGAGACATAGAACATGAC +
Preference number: 4 (lower is better)
Translates to: LPELCPRLPTQYPEVAGTEVTVS*GDIEHD
Trigger: GTCATGTTCTATGTCTCCTCAGGACACAGTTACCTC...GGTTCCTGCTACTTCAGGATACTGTGTTGGAAGGCGGGGACATAGCTCAGGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR TCA 90 bp GCTGCAAAACAACTGCTCCGAAATGGCCCGAAAGAGGCAAGAGGCATCCTTGGCAAAAGTATCATTTGCTaGTGCTTCCGCCTGTATGCC +
Preference number: 4 (lower is better)
Translates to: AAKQLLRNGPKEARGILGKSIIC*CFRLYA
Trigger: GGCATACAGGCGGAAGCATCAGCAAATGATACTTTT...GCCAAGGATGCCTCTTGCCTCTTTCGGGCCATTTCGGAGCAGTTGTTTTGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR TCA 90 bp CCTGGCTGCAAAACAACTGCTCCGAAATGGCCCGAAAGAGGCAAGAGGCATCCTAAAAGTATCATTTGCTaGTGCTTCCGCCTGTATGCC +
Preference number: 4 (lower is better)
Translates to: PGCKTTAPKWPERGKRHPKSIIC*CFRLYA
Trigger: GGCATACAGGCGGAAGCATCAGCAAATGATACTTTT...AGGATGCCTCTTGCCTCTTTCGGGCCATTTCGGAGCAGTTGTTTTGCAGCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR TCA 90 bp AGCAAACCTGACACTTGTCTCCCAAATAGTACTGTCTCCCAGCATACTCCATGTGCATGGATAGGATGGTaGGGCAATCACTGGCCTGCC +
Preference number: 4 (lower is better)
Translates to: SKPDTCLPNSTVSQHTPCAWIGW*GNHWPA
Trigger: GGCAGGCCAGTGATTGCCTCACCATCCTATCCATGC...ACATGGAGTATGCTGGGAGACAGTACTATTTGGGAGACAAGTGTCAGGTTTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470971.5
ENST00000623148.3
CDS-3UTR TCA 90 bp ACTGTGCAAAAGACACCAATTCAATACAGTGCAGTAAAACACTTACATACATCCGCTCCGGCCAAGTGCTaGGGGGAAGGAGCCGGGCTC +
Preference number: 4 (lower is better)
Translates to: TVQKTPIQYSAVKHLHTSAPAKC*GEGAGL
Trigger: GAGCCCGGCTCCTTCCCCTCAGCACTTGGCCGGAGC...GGATGTATGTAAGTGTTTTACTGCACTGTATTGAATTGGTGTCTTTTGCACAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000436609.5
CDS-3UTR TCA 90 bp CCAAGGCTCTCGATTTTCTGTGGTAGAGTTGCGGGGGTTTCTTTCCGAGCGCGAGAAAGCGATAAAGAATaGAATCCCGACTGCAGGTAC +
Preference number: 4 (lower is better)
Translates to: PRLSIFCGRVAGVSFRARESDKE*NPDCRY
Trigger: GTACCTGCAGTCGGGATTTCATTCTTTATCGCTTTC...TCGCGCTCGGAAAGAAACCCCCGCAACTCTACCACAGAAAATCGAGAGCCTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622997.3
CDS-3UTR GCA 90 bp CATCAACTTTTCGTTTATAACCACTACGAGTGGCTTTCCTTTTTCCAGAGTCTCAGCCAAGCCGCCGCCTaGTCGCCTCCCTCACTCACT +
Preference number: 4 (lower is better)
Translates to: HQLFVYNHYEWLSFFQSLSQAAA*SPPSLT
Trigger: AGTGAGTGAGGGAGGCGAGCAGGCGGCGGCTTGGCT...GAGACTCTGGAAAAAGGAAAGCCACTCGTAGTGGTTATAAACGAAAAGTTGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000468657.5
ENST00000471924.5
ENST00000482374.5
ENST00000489033.5
ENST00000495283.5
ENST00000622997.3
ENST00000623144.3
ENST00000623148.3
CDS-3UTR GCA 90 bp CCAAGGCTCTCGATTTTCTGTGGTAGAGTTGCGGGGGTTTCTTTCCGAGCGCGAACAGCTTCCTGCACCTaGGTGACTAATAACAAGATC +
Preference number: 4 (lower is better)
Translates to: PRLSIFCGRVAGVSFRARTASCT*VTNNKI
Trigger: GATCTTGTTATTAGTCACGCAGGTGCAGGAAGCTGT...TCGCGCTCGGAAAGAAACCCCCGCAACTCTACCACAGAAAATCGAGAGCCTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000468657.5
ENST00000471924.5
ENST00000622997.3
ENST00000623144.3
CDS-3UTR GCA 90 bp ACCTGGCTGCAAAACAACTGCTCCGAAATGGCCCGAAAGAGGCAAGAGGCATCCACAGCTTCCTGCACCTaGGTGACTAATAACAAGATC +
Preference number: 4 (lower is better)
Translates to: TWLQNNCSEMARKRQEASTASCT*VTNNKI
Trigger: GATCTTGTTATTAGTCACGCAGGTGCAGGAAGCTGT...GGATGCCTCTTGCCTCTTTCGGGCCATTTCGGAGCAGTTGTTTTGCAGCCAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000486353.5
ENST00000495283.5
ENST00000623144.3
ENST00000624161.3
CDS-3UTR GCA 90 bp AGCAGCCCAAAGTCTAGGCCTGAAAAGGCAGTTGAAGTCAGCGCTGCAGAATCTACAAGGGCTTGCTTATaGAGGTATCCGGAAAGCAGC +
Preference number: 4 (lower is better)
Translates to: SSPKSRPEKAVEVSAAESTRACL*RYPESS
Trigger: GCTGCTTTCCGGATACCTGCATAAGCAAGCCCTTGT...AGATTCTGCAGCGCTGACTTCAACTGCCTTTTCAGGCCTAGACTTTGGGCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000486353.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR GCA 90 bp TCTTCCTTTCCGACTGGGCATAGCATTCCAGGCAGGAACAGACATCACTTGGGTACAAGGGCTTGCTTATaGAGGTATCCGGAAAGCAGC +
Preference number: 4 (lower is better)
Translates to: SSFPTGHSIPGRNRHHLGTRACL*RYPESS
Trigger: GCTGCTTTCCGGATACCTGCATAAGCAAGCCCTTGT...ACCCAAGTGATGTCTGTTCCTGCCTGGAATGCTATGCCCAGTCGGAAAGGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR GCA 90 bp AAGAGGCAAGAGGCATCCTTGGCAGTCAGCTTTCGAAACAGCCCTAAGCTGCCTGCAGTAACAAGGGCTTaGTTATGCAGGTATCCGGAA +
Preference number: 4 (lower is better)
Translates to: KRQEASLAVSFRNSPKLPAVTRA*LCRYPE
Trigger: TTCCGGATACCTGCATAAGCAAGCCCTTGTTACTGC...AGGCAGCTTAGGGCTGTTTCGAAAGCTGACTGCCAAGGATGCCTCTTGCCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000486353.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000624881.3
CDS-3UTR GCA 90 bp CCGACTGGGCATAGCATTCCAGGCAGGAACAGACATCACTTGGGTAACTGGTTTGGGCCCGGCATGTTGTaGCTGTTTATAAACCGAGAT +
Preference number: 4 (lower is better)
Translates to: PTGHSIPGRNRHHLGNWFGPGML*LFINRD
Trigger: ATCTCGGTTTATAAACAGGCACAACATGCCGGGCCC...AAACCAGTTACCCAAGTGATGTCTGTTCCTGCCTGGAATGCTATGCCCAGTCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR GCA 90 bp GGCCTGAAAAGGCAGTTGAAGTCAGCGCTGCAGAATCTTGGCACTTCCCAGGAGAGAAGAACCACCATATaGTGTACCAACTGGATGCCA +
Preference number: 4 (lower is better)
Translates to: GLKRQLKSALQNLGTSQERRTTI*CTNWMP
Trigger: TGGCATCCAGTTGGTACAGCATATGGTGGTTCTTCT...CTCCTGGGAAGTGCCAAGATTCTGCAGCGCTGACTTCAACTGCCTTTTCAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR CCA 90 bp AGAGAACCATGTGCCTTCAAAACTGATATCACAGAATGCAACTGGCTTCAGATACAGTATGGCCGGAGATaGCGGGTGGCGAGCCAAGCC +
Preference number: 4 (lower is better)
Translates to: REPCAFKTDITECNWLQIQYGRR*RVASQA
Trigger: GGCTTGGCTCGCCACCCGCCATCTCCGGCCATACTG...TATCTGAAGCCAGTTGCATTCTGTGATATCAGTTTTGAAGGCACATGGTTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251943.8
ENST00000610588.4
ENST00000621367.4
CDS-3UTR CCA 90 bp CATCAACTTTTCGTTTATAACCACTACGAGTGGCTTTCCTTTTTCCAGAGTCTCCAGTATGGCCGGAGATaGCGGGTGGCGAGCCAAGCC +
Preference number: 4 (lower is better)
Translates to: HQLFVYNHYEWLSFFQSLQYGRR*RVASQA
Trigger: GGCTTGGCTCGCCACCCGCCATCTCCGGCCATACTG...GAGACTCTGGAAAAAGGAAAGCCACTCGTAGTGGTTATAAACGAAAAGTTGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000468657.5
ENST00000471924.5
ENST00000482374.5
ENST00000489033.5
ENST00000495283.5
ENST00000622997.3
ENST00000623144.3
ENST00000623148.3
CDS-3UTR CCA 90 bp ATGCAGAAAATTTTTCTGGCTGGCCAGGAGGATAACATTTCAGTGTTGATAAGTACGCGGCTGGCAGTATaGCCGGAGATGGCGGGTGGC +
Preference number: 4 (lower is better)
Translates to: MQKIFLAGQEDNISVLISTRLAV*PEMAGG
Trigger: GCCACCCGCCATCTCCGGCCATACTGCCAGCCGCGT...ACTTATCAACACTGAAATGTTATCCTCCTGGCCAGCCAGAAAAATTTTCTGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000468657.5
ENST00000482374.5
ENST00000489033.5
CDS-3UTR CCA 90 bp TATCCGGAAAGCAGCCCAAAGTCTAGGCCTGAAAAGGCAGTTGAAGTCAGCGCTCAGAAGCAATGGACTTaGCTTGCCCAGGACAAGTCA +
Preference number: 4 (lower is better)
Translates to: YPESSPKSRPEKAVEVSAQKQWT*LAQDKS
Trigger: TGACTTGTCCTGGGCAAGCCAAGTCCATTGCTTCTG...AGCGCTGACTTCAACTGCCTTTTCAGGCCTAGACTTTGGGCTGCTTTCCGGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000471924.5
ENST00000486353.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR CCA 90 bp AAAAGCAGGGTGCAGGTAGGATGGGTAGCAGTAACAAGGGCTTGCTTATGCAGGCAGAAGCAATGGACTTaGCTTGCCCAGGACAAGTCA +
Preference number: 4 (lower is better)
Translates to: KSRVQVGWVAVTRACLCRQKQWT*LAQDKS
Trigger: TGACTTGTCCTGGGCAAGCCAAGTCCATTGCTTCTG...CCTGCATAAGCAAGCCCTTGTTACTGCTACCCATCCTACCTGCACCCTGCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000486353.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR CCA 90 bp AGGTACATAATGAGAAGCTGGGGGAGATGGAGCAATACAGCCAATTGGCCCAGGCAGAAGCAATGGACTTaGCTTGCCCAGGACAAGTCA +
Preference number: 4 (lower is better)
Translates to: RYIMRSWGRWSNTANWPRQKQWT*LAQDKS
Trigger: TGACTTGTCCTGGGCAAGCCAAGTCCATTGCTTCTG...CCTGGGCCAATTGGCTGTATTGCTCCATCTCCCCCAGCTTCTCATTATGTACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR CCA 90 bp CTGTGGCACATAGACCATGGAGTGCCAGTAGCTGTGGTAATAGCACTGCAATCCGGCAAGAGGCATCCTTaGCAGTCAGCTTTCGAAACA +
Preference number: 4 (lower is better)
Translates to: LWHIDHGVPVAVVIALQSGKRHP*QSAFET
Trigger: TGTTTCGAAAGCTGACTGCCAAGGATGCCTCTTGCC...GGATTGCAGTGCTATTACCACAGCTACTGGCACTCCATGGTCTATGTGCCACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR CCA 90 bp AGCAGCCCAAAGTCTAGGCCTGAAAAGGCAGTTGAAGTCAGCGCTGCAGAATCTGGCAAGAGGCATCCTTaGCAGTCAGCTTTCGAAACA +
Preference number: 4 (lower is better)
Translates to: SSPKSRPEKAVEVSAAESGKRHP*QSAFET
Trigger: TGTTTCGAAAGCTGACTGCCAAGGATGCCTCTTGCC...AGATTCTGCAGCGCTGACTTCAACTGCCTTTTCAGGCCTAGACTTTGGGCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000486353.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR CCA 90 bp CCCATATCCCCGACCTTGTCTCGGAGATGGATGCTGAGGATGAAAATGTTCATTGGCCAGCACTTTCCTTaGGATCTCCCAACCGTTCCA +
Preference number: 4 (lower is better)
Translates to: PISPTLSRRWMLRMKMFIGQHFP*DLPTVP
Trigger: TGGAACGGTTGGGAGATCCCAAGGAAAGTGCTGGCC...AATGAACATTTTCATCCTCAGCATCCATCTCCGAGACAAGGTCGGGGATATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR CCA 90 bp TGGGGTAAATCCATACTGGGACTCCTTATTCACACAACTCATCTGGCGGTGACTGGCCAGCACTTTCCTTaGGATCTCCCAACCGTTCCA +
Preference number: 4 (lower is better)
Translates to: WGKSILGLLIHTTHLAVTGQHFP*DLPTVP
Trigger: TGGAACGGTTGGGAGATCCCAAGGAAAGTGCTGGCC...AGTCACCGCCAGATGAGTTGTGTGAATAAGGAGTCCCAGTATGGATTTACCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR CCA 90 bp GACCTGGCTGCAAAACAACTGCTCCGAAATGGCCCGAAAGAGGCAAGAGGCATCACCTTGTCTCGGAGATaGATGCTGAGGATGAAAATG +
Preference number: 4 (lower is better)
Translates to: DLAAKQLLRNGPKEARGITLSRR*MLRMKM
Trigger: CATTTTCATCCTCAGCATCCATCTCCGAGACAAGGT...GATGCCTCTTGCCTCTTTCGGGCCATTTCGGAGCAGTTGTTTTGCAGCCAGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR CCA 90 bp AGGATGGGTAGCAGTAACAAGGGCTTGCTTATGCAGGTATCCGGAAAGCAGCCCGCAGCACCTTTTACCTaGGCCTGGGTAAAAATCAAC +
Preference number: 4 (lower is better)
Translates to: RMGSSNKGLLMQVSGKQPAAPFT*AWVKIN
Trigger: GTTGATTTTTACCCAGGCCCAGGTAAAAGGTGCTGC...GGGCTGCTTTCCGGATACCTGCATAAGCAAGCCCTTGTTACTGCTACCCATCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR CCA 90 bp TTCCAAATGATGGACCTGGCTGCAAAACAACTGCTCCGAAATGGCCCGAAAGAGGCAGGAGTCAAAACCTaGCAAAGGTGGCTGCCCATA +
Preference number: 4 (lower is better)
Translates to: FQMMDLAAKQLLRNGPKEAGVKT*QRWLPI
Trigger: TATGGGCAGCCACCTTTGCCAGGTTTTGACTCCTGC...CTCTTTCGGGCCATTTCGGAGCAGTTGTTTTGCAGCCAGGTCCATCATTTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR CCA 90 bp CTGTGGCACATAGACCATGGAGTGCCAGTAGCTGTGGTAATAGCACTGCAATCCAGAAGCTGGGGGAGATaGAGCAATACAGCCAATTGG +
Preference number: 4 (lower is better)
Translates to: LWHIDHGVPVAVVIALQSRSWGR*SNTANW
Trigger: CCAATTGGCTGTATTGCTCCATCTCCCCCAGCTTCT...GGATTGCAGTGCTATTACCACAGCTACTGGCACTCCATGGTCTATGTGCCACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR CCA 90 bp AGGTACAATAGAAGAGATGACCCTCTTTGTGTAGCTGCTTTGCCAGTTCCAGCTGCCCAGGAAGCGTGCTaGCCCTTTGGCAAGCTTCTA +
Preference number: 4 (lower is better)
Translates to: RYNRRDDPLCVAALPVPAAQEAC*PFGKLL
Trigger: TAGAAGCTTGCCAAAGGGCCAGCACGCTTCCTGGGC...AGCTGGAACTGGCAAAGCAGCTACACAAAGAGGGTCATCTCTTCTATTGTACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492038.5
CDS-3UTR TCA 90 bp GCAGAGAACCATGTGCCTTCAAAACTGATATCACAGAATGCAACTGGCTTCAGACCGACACACACGCAATaGGGTCGTCAAAGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: AENHVPSKLISQNATGFRPTHTQ*GRQSWW
Trigger: CCACCAGCTTTGACGACCTCATTGCGTGTGTGTCGG...TCTGAAGCCAGTTGCATTCTGTGATATCAGTTTTGAAGGCACATGGTTCTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000251943.8
ENST00000394780.8
ENST00000470971.5
ENST00000610588.4
ENST00000621367.4
ENST00000624161.3
ENST00000636363.1
CDS-3UTR TCA 90 bp CTGCTTTCTGAATGTCTTCTTTCAAGGAATCCTTGTACCTGTGGTAGAGTTGCGCCGACACACACGCAATaGGGTCGTCAAAGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: LLSECLLSRNPCTCGRVAPTHTQ*GRQSWW
Trigger: CCACCAGCTTTGACGACCTCATTGCGTGTGTGTCGG...CGCAACTCTACCACAGGTACAAGGATTCCTTGAAAGAAGACATTCAGAAAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482374.5
ENST00000495283.5
CDS-3UTR TCA 90 bp GCTGCATCTGTGGCACATAGACCATGGAGTGCCAGTAGCTGTGGTAATAGCACTCTTCCTGCACCTGCGTaGCTAATAACAAGATCTGCT +
Preference number: 4 (lower is better)
Translates to: AASVAHRPWSASSCGNSTLPAPA*LITRSA
Trigger: AGCAGATCTTGTTATTAGTCACGCAGGTGCAGGAAG...AGTGCTATTACCACAGCTACTGGCACTCCATGGTCTATGTGCCACAGATGCAGC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR TCA 90 bp TCTAGGCCTGAAAAGGCAGTTGAAGTCAGCGCTGCAGAATCTTGGCACTTCCCACTTCCTGCACCTGCGTaGCTAATAACAAGATCTGCT +
Preference number: 4 (lower is better)
Translates to: SRPEKAVEVSAAESWHFPLPAPA*LITRSA
Trigger: AGCAGATCTTGTTATTAGTCACGCAGGTGCAGGAAG...TGGGAAGTGCCAAGATTCTGCAGCGCTGACTTCAACTGCCTTTTCAGGCCTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000471924.5
ENST00000486353.5
ENST00000495283.5
ENST00000623144.3
ENST00000624161.3
CDS-3UTR TCA 90 bp AGTCTAGGCCTGAAAAGGCAGTTGAAGTCAGCGCTGCAGAATCTTGGCACTTCCCTTCCTGCACCTGCGTaGCTAATAACAAGATCTGCT +
Preference number: 4 (lower is better)
Translates to: SLGLKRQLKSALQNLGTSLPAPA*LITRSA
Trigger: AGCAGATCTTGTTATTAGTCACGCAGGTGCAGGAAG...GGAAGTGCCAAGATTCTGCAGCGCTGACTTCAACTGCCTTTTCAGGCCTAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000471924.5
ENST00000486353.5
ENST00000495283.5
ENST00000623144.3
ENST00000624161.3
CDS-3UTR TCA 90 bp TGGACTTGGCTTGCCCAGGACAAGTCAGGACCCTGCAGGTACAATAGAAGAGATCTTCCTGCACCTGCGTaGCTAATAACAAGATCTGCT +
Preference number: 4 (lower is better)
Translates to: WTWLAQDKSGPCRYNRRDLPAPA*LITRSA
Trigger: AGCAGATCTTGTTATTAGTCACGCAGGTGCAGGAAG...ATCTCTTCTATTGTACCTGCAGGGTCCTGACTTGTCCTGGGCAAGCCAAGTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000624161.3
CDS-3UTR TCA 90 bp CGAAATGGCCCGAAAGAGGCAAGAGGCATCCTTGGCAGTCAGCTTTCGAAACAGAGACACAAGCCTTCCTaGTTTCCAAATGATGGACCT +
Preference number: 4 (lower is better)
Translates to: RNGPKEARGILGSQLSKQRHKPS*FPNDGP
Trigger: AGGTCCATCATTTGGAAATCAGGAAGGCTTGTGTCT...CTGTTTCGAAAGCTGACTGCCAAGGATGCCTCTTGCCTCTTTCGGGCCATTTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000624881.3
CDS-3UTR TCA 90 bp AAGAGGCAAGAGGCATCCTTGGCAGTCAGCTTTCGAAACAGCCCTAAGCTGCCTAGACACAAGCCTTCCTaGTTTCCAAATGATGGACCT +
Preference number: 4 (lower is better)
Translates to: KRQEASLAVSFRNSPKLPRHKPS*FPNDGP
Trigger: AGGTCCATCATTTGGAAATCAGGAAGGCTTGTGTCT...AGGCAGCTTAGGGCTGTTTCGAAAGCTGACTGCCAAGGATGCCTCTTGCCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000624881.3
CDS-3UTR TCA 90 bp TATGCAGGTATCCGGAAAGCAGCCCAAAGTCTAGGCCTGAAAAGGCAGTTGAAGATTGCCAGCTGTCTGTaGGTAGTGCATTGGAGGATC +
Preference number: 4 (lower is better)
Translates to: YAGIRKAAQSLGLKRQLKIASCL*VVHWRI
Trigger: GATCCTCCAATGCACTACTCACAGACAGCTGGCAAT...CTTCAACTGCCTTTTCAGGCCTAGACTTTGGGCTGCTTTCCGGATACCTGCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR TCA 90 bp GGCCTGAAAAGGCAGTTGAAGTCAGCGCTGCAGAATCTTGGCACTTCCCAGGAGGTTTATAAACCGAGATaGATTCCTGGGCATCCCATA +
Preference number: 4 (lower is better)
Translates to: GLKRQLKSALQNLGTSQEVYKPR*IPGHPI
Trigger: TATGGGATGCCCAGGAATTCATCTCGGTTTATAAAC...CTCCTGGGAAGTGCCAAGATTCTGCAGCGCTGACTTCAACTGCCTTTTCAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR TCA 90 bp ACTGCTCCGAAATGGCCCGAAAGAGGCAAGAGGCATCCTTGGCAGTCAGCTTTCGTTTATAAACCGAGATaGATTCCTGGGCATCCCATA +
Preference number: 4 (lower is better)
Translates to: TAPKWPERGKRHPWQSAFVYKPR*IPGHPI
Trigger: TATGGGATGCCCAGGAATTCATCTCGGTTTATAAAC...GAAAGCTGACTGCCAAGGATGCCTCTTGCCTCTTTCGGGCCATTTCGGAGCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR TCA 90 bp TATCCGGAAAGCAGCCCAAAGTCTAGGCCTGAAAAGGCAGTTGAAGTCAGCGCTCAACTCATCTGGCGGTaGCTACGTCTAAATGAACGA +
Preference number: 4 (lower is better)
Translates to: YPESSPKSRPEKAVEVSAQLIWR*LRLNER
Trigger: TCGTTCATTTAGACGTAGTCACCGCCAGATGAGTTG...AGCGCTGACTTCAACTGCCTTTTCAGGCCTAGACTTTGGGCTGCTTTCCGGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR TCA 90 bp AAATGGCCCGAAAGAGGCAAGAGGCATCCTTGGCAGTCAGCTTTCGAAACAGCCTCCAACACAGTATCCTaGAGTAGCAGGAACCATTGT +
Preference number: 4 (lower is better)
Translates to: KWPERGKRHPWQSAFETASNTVS*SSRNHC
Trigger: ACAATGGTTCCTGCTACTTCAGGATACTGTGTTGGA...GGCTGTTTCGAAAGCTGACTGCCAAGGATGCCTCTTGCCTCTTTCGGGCCATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR TCA 90 bp AGTCAAAACCTGGCAAAGGTGGCTGCCCATAGGGATCTGACATTACTGGATAATCAAAGTCTGTTTGCCTaGGCTATGTCCCCGCCTTCC +
Preference number: 4 (lower is better)
Translates to: SQNLAKVAAHRDLTLLDNQSLFA*AMSPPS
Trigger: GGAAGGCGGGGACATAGCTCAGGCAAACAGACTTTG...ATTATCCAGTAATGTCAGATCCCTATGGGCAGCCACCTTTGCCAGGTTTTGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR TCA 90 bp GTCAGCGCTGCAGAATCTTGGCACTTCCCAGGAGCAGAAGCAATGGACTTGGCTAGGAGACATAGAACATaGCTTTCTGTCCTGAAGAGA +
Preference number: 4 (lower is better)
Translates to: VSAAESWHFPGAEAMDLARRHRT*LSVLKR
Trigger: TCTCTTCAGGACAGAAAGTCATGTTCTATGTCTCCT...AGCCAAGTCCATTGCTTCTGCTCCTGGGAAGTGCCAAGATTCTGCAGCGCTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR TCA 90 bp TTCCTTGGGATCTCCCAACCGTTCCAGGTATTTCTCAAAAGATCCCTCCACATAAGGATGTCTGCAAGCTaGGGAGCAAGGAGAGCCAGT +
Preference number: 4 (lower is better)
Translates to: FLGISQPFQVFLKRSLHIRMSAS*GARRAS
Trigger: ACTGGCTCTCCTTGCTCCTCAGCTTGCAGACATCCT...TATGTGGAGGGATCTTTTGAGAAATACCTGGAACGGTTGGGAGATCCCAAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487141.5
CDS-3UTR GCA 90 bp CATCAACTTTTCGTTTATAACCACTACGAGTGGCTTTCCTTTTTCCAGAGTCTCCCTCCCTCACTCACTTaGAGACTGTCGGGCGCCGAC +
Preference number: 4 (lower is better)
Translates to: HQLFVYNHYEWLSFFQSLPPSLT*RLSGAD
Trigger: GTCGGCGCCCGACAGTCTGCAAGTGAGTGAGGGAGG...GAGACTCTGGAAAAAGGAAAGCCACTCGTAGTGGTTATAAACGAAAAGTTGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000468657.5
ENST00000471924.5
ENST00000482374.5
ENST00000489033.5
ENST00000495283.5
ENST00000622997.3
ENST00000623144.3
ENST00000623148.3
CDS-3UTR GCA 90 bp AGGTACATAATGAGAAGCTGGGGGAGATGGAGCAATACAGCCAATTGGCCCAGGGCAGTAACAAGGGCTTaGTTATGCAGGTATCCGGAA +
Preference number: 4 (lower is better)
Translates to: RYIMRSWGRWSNTANWPRAVTRA*LCRYPE
Trigger: TTCCGGATACCTGCATAAGCAAGCCCTTGTTACTGC...CCTGGGCCAATTGGCTGTATTGCTCCATCTCCCCCAGCTTCTCATTATGTACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR GCA 90 bp TGGACTTGGCTTGCCCAGGACAAGTCAGGACCCTGCAGGTACAATAGAAGAGATAATTCAAAGTCTGTTTaGCTGAGCTATGTCCCCGCC +
Preference number: 4 (lower is better)
Translates to: WTWLAQDKSGPCRYNRRDNSKSV*LSYVPA
Trigger: GGCGGGGACATAGCTCAGGCAAACAGACTTTGAATT...ATCTCTTCTATTGTACCTGCAGGGTCCTGACTTGTCCTGGGCAAGCCAAGTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR GCA 90 bp CCCGAAAGAGGCAAGAGGCATCCTTGGCAGTCAGCTTTCGAAACAGCCCTAAGCGGAAGCTGCAACTGCTaGAATATTTCCCATCATCTT +
Preference number: 4 (lower is better)
Translates to: PERGKRHPWQSAFETALSGSCNC*NISHHL
Trigger: AAGATGATGGGAAATATTGCAGCAGTTGCAGCTTCC...GCTTAGGGCTGTTTCGAAAGCTGACTGCCAAGGATGCCTCTTGCCTCTTTCGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR GCA 90 bp ATGAATTCCTGGGCATCCCATATCCCCGACCTTGTCTCGGAGATGGATGCTGAGAGAAGAACCACCATATaGTGTACCAACTGGATGCCA +
Preference number: 4 (lower is better)
Translates to: MNSWASHIPDLVSEMDAERRTTI*CTNWMP
Trigger: TGGCATCCAGTTGGTACAGCATATGGTGGTTCTTCT...CTCAGCATCCATCTCCGAGACAAGGTCGGGGATATGGGATGCCCAGGAATTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR GCA 90 bp CAGGAAGCGTGCTGCAGGTACAATAGAAGAGATGACCCTCTTTGTGTAGCTGCTGCCCAGGAAGCGTGCTaGAGGTACAATAGAAGAGAT +
Preference number: 4 (lower is better)
Translates to: QEACCRYNRRDDPLCVAAAQEAC*RYNRRD
Trigger: ATCTCTTCTATTGTACCTGCAGCACGCTTCCTGGGC...AGCAGCTACACAAAGAGGGTCATCTCTTCTATTGTACCTGCAGCACGCTTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000468657.5
ENST00000482374.5
ENST00000489033.5
CDS-3UTR CCA 90 bp ACTGATATCACAGAATGCAACTGGCTTCAGATAATTCTCAAGAAACGTGAAGAGCAGTATGGCCGGAGATaGCGGGTGGCGAGCCAAGCC +
Preference number: 4 (lower is better)
Translates to: TDITECNWLQIILKKREEQYGRR*RVASQA
Trigger: GGCTTGGCTCGCCACCCGCCATCTCCGGCCATACTG...CTCTTCACGTTTCTTGAGAATTATCTGAAGCCAGTTGCATTCTGTGATATCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251943.8
ENST00000610588.4
ENST00000621367.4
CDS-3UTR CCA 90 bp ATCCTCGCTTCCAGTTACAGCATTATTTCTGTTCTTCTTAGAACCACTTCGAAACAGTATGGCCGGAGATaGCGGGTGGCGAGCCAAGCC +
Preference number: 4 (lower is better)
Translates to: ILASSYSIISVLLRTTSKQYGRR*RVASQA
Trigger: GGCTTGGCTCGCCACCCGCCATCTCCGGCCATACTG...TTTCGAAGTGGTTCTAAGAAGAACAGAAATAATGCTGTAACTGGAAGCGAGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
CDS-3UTR CCA 90 bp GTGCAAAAGACACCAATTCAATACAGTGCAGTAAAACACTTACATACATCCAGTACGCGGCTGGCAGTATaGCCGGAGATGGCGGGTGGC +
Preference number: 4 (lower is better)
Translates to: VQKTPIQYSAVKHLHTSSTRLAV*PEMAGG
Trigger: GCCACCCGCCATCTCCGGCCATACTGCCAGCCGCGT...ACTGGATGTATGTAAGTGTTTTACTGCACTGTATTGAATTGGTGTCTTTTGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251943.8
ENST00000610588.4
ENST00000621367.4
CDS-3UTR CCA 90 bp GATAAATCTAAAGCAGAGAACCATGTGCCTTCAAAACTGATATCACAGAATGCAACGCGGCTGGCAGTATaGCCGGAGATGGCGGGTGGC +
Preference number: 4 (lower is better)
Translates to: DKSKAENHVPSKLISQNATRLAV*PEMAGG
Trigger: GCCACCCGCCATCTCCGGCCATACTGCCAGCCGCGT...TGCATTCTGTGATATCAGTTTTGAAGGCACATGGTTCTCTGCTTTAGATTTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251943.8
ENST00000610588.4
ENST00000621367.4
CDS-3UTR CCA 90 bp CACTGTAGCATTGAGGAACGGTTTGATCTACCAGAGGTGGCTCAGTATAGACTGACAACTGCTCCGAAATaGCCCGAAAGAGGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: HCSIEERFDLPEVAQYRLTTAPK*PERGKR
Trigger: CCTCTTGCCTCTTTCGGGCCATTTCGGAGCAGTTGT...CAGTCTATACTGAGCCACCTCTGGTAGATCAAACCGTTCCTCAATGCTACAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR CCA 90 bp AATCTGGCACAACCGGAAGGCAGGAGTCAAAACCTGGCAAAGGTGGCTGCCCATATCTGTGACATAAGTTaGAGGTTTTCCAGGAAAGCG +
Preference number: 4 (lower is better)
Translates to: NLAQPEGRSQNLAKVAAHICDIS*RFSRKA
Trigger: CGCTTTCCTGGAAAACCTCCAACTTATGTCACAGAT...ATGGGCAGCCACCTTTGCCAGGTTTTGACTCCTGCCTTCCGGTTGTGCCAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR CCA 90 bp CCCTGCAGGTACAATAGAAGAGATGACCCTCTTTGTGTAGCTGCTTTGCCAGTTACCGAGATGAATTCCTaGGCATCCCATATCCCCGAC +
Preference number: 4 (lower is better)
Translates to: PCRYNRRDDPLCVAALPVTEMNS*ASHIPD
Trigger: GTCGGGGATATGGGATGCCCAGGAATTCATCTCGGT...AACTGGCAAAGCAGCTACACAAAGAGGGTCATCTCTTCTATTGTACCTGCAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR CCA 90 bp GACCTGGCTGCAAAACAACTGCTCCGAAATGGCCCGAAAGAGGCAAGAGGCATCCCTTTTACCTGGGCCTaGGTAAAAATCAACTTTAGG +
Preference number: 4 (lower is better)
Translates to: DLAAKQLLRNGPKEARGIPFTWA*VKINFR
Trigger: CCTAAAGTTGATTTTTACCCAGGCCCAGGTAAAAGG...GATGCCTCTTGCCTCTTTCGGGCCATTTCGGAGCAGTTGTTTTGCAGCCAGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR CCA 90 bp CCTGGCTGCAAAACAACTGCTCCGAAATGGCCCGAAAGAGGCAAGAGGCATCCTGGGGTAAATCCATACTaGGACTCCTTATTCACACAA +
Preference number: 4 (lower is better)
Translates to: PGCKTTAPKWPERGKRHPGVNPY*DSLFTQ
Trigger: TTGTGTGAATAAGGAGTCCCAGTATGGATTTACCCC...AGGATGCCTCTTGCCTCTTTCGGGCCATTTCGGAGCAGTTGTTTTGCAGCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR CCA 90 bp CCGACTGGGCATAGCATTCCAGGCAGGAACAGACATCACTTGGGTAACTGGTTTCATCTGTCCATTCCCTaGGGTAAATCCATACTGGGA +
Preference number: 4 (lower is better)
Translates to: PTGHSIPGRNRHHLGNWFHLSIP*GKSILG
Trigger: TCCCAGTATGGATTTACCCCAGGGAATGGACAGATG...AAACCAGTTACCCAAGTGATGTCTGTTCCTGCCTGGAATGCTATGCCCAGTCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR CCA 90 bp TCTAGGCCTGAAAAGGCAGTTGAAGTCAGCGCTGCAGAATCTTGGCACTTCCCACATCTGTCCATTCCCTaGGGTAAATCCATACTGGGA +
Preference number: 4 (lower is better)
Translates to: SRPEKAVEVSAAESWHFPHLSIP*GKSILG
Trigger: TCCCAGTATGGATTTACCCCAGGGAATGGACAGATG...TGGGAAGTGCCAAGATTCTGCAGCGCTGACTTCAACTGCCTTTTCAGGCCTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR CCA 90 bp CAGCACTTTCCTTGGGATCTCCCAACCGTTCCAGGTATTTCTCAAAAGATCCCTTTTCTTCCAAGCCCCTaGGCATCTGTCCATTCCCTG +
Preference number: 4 (lower is better)
Translates to: QHFPWDLPTVPGISQKIPFLPSP*ASVHSL
Trigger: CAGGGAATGGACAGATGCCCAGGGGCTTGGAAGAAA...AGGGATCTTTTGAGAAATACCTGGAACGGTTGGGAGATCCCAAGGAAAGTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR CCA 90 bp CACTGTAGCATTGAGGAACGGTTTGATCTACCAGAGGTGGCTCAGTATAGACTGTTTCTTCCAAGCCCCTaGGCATCTGTCCATTCCCTG +
Preference number: 4 (lower is better)
Translates to: HCSIEERFDLPEVAQYRLFLPSP*ASVHSL
Trigger: CAGGGAATGGACAGATGCCCAGGGGCTTGGAAGAAA...CAGTCTATACTGAGCCACCTCTGGTAGATCAAACCGTTCCTCAATGCTACAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR CCA 90 bp TGGGGTAAATCCATACTGGGACTCCTTATTCACACAACTCATCTGGCGGTGACTTTTCTTCCAAGCCCCTaGGCATCTGTCCATTCCCTG +
Preference number: 4 (lower is better)
Translates to: WGKSILGLLIHTTHLAVTFLPSP*ASVHSL
Trigger: CAGGGAATGGACAGATGCCCAGGGGCTTGGAAGAAA...AGTCACCGCCAGATGAGTTGTGTGAATAAGGAGTCCCAGTATGGATTTACCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR CCA 90 bp CCCTGCAGGTACAATAGAAGAGATGACCCTCTTTGTGTAGCTGCTTTGCCAGTTGTGGCACATAGACCATaGAGTGCCAGTAGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: PCRYNRRDDPLCVAALPVVAHRP*SASSCG
Trigger: ACCACAGCTACTGGCACTCCATGGTCTATGTGCCAC...AACTGGCAAAGCAGCTACACAAAGAGGGTCATCTCTTCTATTGTACCTGCAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR CCA 90 bp TGGGGTAAATCCATACTGGGACTCCTTATTCACACAACTCATCTGGCGGTGACTGTGGCACATAGACCATaGAGTGCCAGTAGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: WGKSILGLLIHTTHLAVTVAHRP*SASSCG
Trigger: ACCACAGCTACTGGCACTCCATGGTCTATGTGCCAC...AGTCACCGCCAGATGAGTTGTGTGAATAAGGAGTCCCAGTATGGATTTACCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR CCA 90 bp CGAAATGGCCCGAAAGAGGCAAGAGGCATCCTTGGCAGTCAGCTTTCGAAACAGAGCAATACAGCCAATTaGCCCAGGATTTATAGCACC +
Preference number: 4 (lower is better)
Translates to: RNGPKEARGILGSQLSKQSNTAN*PRIYST
Trigger: GGTGCTATAAATCCTGGGCCAATTGGCTGTATTGCT...CTGTTTCGAAAGCTGACTGCCAAGGATGCCTCTTGCCTCTTTCGGGCCATTTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
3UTR CAA 72 bp CTCTGGCCATTGCCCTCCTCTAAATTCAAAGTCTGTTaGCCTGAGCTATGTCCCCGCCTTCCAACACAGTAT +
Preference number: 4 (lower is better)
Translates to: LWPLPSSKFKVC*PELCPRLPTQY
Trigger: ATACTGTGTTGGAAGGCGGGGACATAGCTCAGGCAAACAGACTTTGAATTTAGAGGAGGGCAATGGCCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
3UTR CAA 72 bp CTGTATGCCATCTTCTCTCCTCACCTCACTGTAGCATaGAGGAACGGTTTGATCTACCAGAGGTGGCTCAGT +
Preference number: 4 (lower is better)
Translates to: LYAIFSPHLTVA*RNGLIYQRWLS
Trigger: ACTGAGCCACCTCTGGTAGATCAAACCGTTCCTCAATGCTACAGTGAGGTGAGGAGAGAAGATGGCATACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR TCA 90 bp CAGGAAGCGTGCTGCAGGTACAATAGAAGAGATGACCCTCTTTGTGTAGCTGCTCTTCCTGCACCTGCGTaGCTAATAACAAGATCTGCT +
Preference number: 4 (lower is better)
Translates to: QEACCRYNRRDDPLCVAALPAPA*LITRSA
Trigger: AGCAGATCTTGTTATTAGTCACGCAGGTGCAGGAAG...AGCAGCTACACAAAGAGGGTCATCTCTTCTATTGTACCTGCAGCACGCTTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468657.5
ENST00000482374.5
CDS-3UTR TCA 90 bp ATGGCCCGAAAGAGGCAAGAGGCATCCTTGGCAGTCAGCTTTCGAAACAGCCCTCATAGCCATTATCTGTaGCATAAGTTGGAGGTTTTC +
Preference number: 4 (lower is better)
Translates to: MARKRQEASLAVSFRNSPHSHYL*HKLEVF
Trigger: GAAAACCTCCAACTTATGTCACAGATAATGGCTATG...AGGGCTGTTTCGAAAGCTGACTGCCAAGGATGCCTCTTGCCTCTTTCGGGCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR TCA 90 bp ATGGCCCGAAAGAGGCAAGAGGCATCCTTGGCAGTCAGCTTTCGAAACAGCCCTTCCCTCGAATTTTCTTaGACATCTTCTTCTGTTGCT +
Preference number: 4 (lower is better)
Translates to: MARKRQEASLAVSFRNSPSLEFS*TSSSVA
Trigger: AGCAACAGAAGAAGATGTTCAAGAAAATTCGAGGGA...AGGGCTGTTTCGAAAGCTGACTGCCAAGGATGCCTCTTGCCTCTTTCGGGCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR TCA 90 bp GGAATAATCTGGCACAACCGGAAGGCAGGAGTCAAAACCTGGCAAAGGTGGCTGGTTTATAAACCGAGATaGATTCCTGGGCATCCCATA +
Preference number: 4 (lower is better)
Translates to: GIIWHNRKAGVKTWQRWLVYKPR*IPGHPI
Trigger: TATGGGATGCCCAGGAATTCATCTCGGTTTATAAAC...CAGCCACCTTTGCCAGGTTTTGACTCCTGCCTTCCGGTTGTGCCAGATTATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR TCA 90 bp CAGTTGAAGTCAGCGCTGCAGAATCTTGGCACTTCCCAGGAGCAGAAGCAATGGCATGACTTTCTGTCCTaGAGAGACAAGTTTGCTGTA +
Preference number: 4 (lower is better)
Translates to: QLKSALQNLGTSQEQKQWHDFLS*RDKFAV
Trigger: TACAGCAAACTTGTCTCTTCAGGACAGAAAGTCATG...CCATTGCTTCTGCTCCTGGGAAGTGCCAAGATTCTGCAGCGCTGACTTCAACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR TCA 90 bp CTATTTCCGGGACATAACCCCCAGGCATTTTCTGGTAACCTCTTCCTTTCCGACGAGGTAACTGTGTCCTaGGGAGACATAGAACATGAC +
Preference number: 4 (lower is better)
Translates to: LFPGHNPQAFSGNLFLSDEVTVS*GDIEHD
Trigger: GTCATGTTCTATGTCTCCTCAGGACACAGTTACCTC...GTCGGAAAGGAAGAGGTTACCAGAAAATGCCTGGGGGTTATGTCCCGGAAATAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR TCA 90 bp CTGTGGCACATAGACCATGGAGTGCCAGTAGCTGTGGTAATAGCACTGCAATCCCTGCCCATAGGGATCTaGCATTACTGGATAATAGAC +
Preference number: 4 (lower is better)
Translates to: LWHIDHGVPVAVVIALQSLPIGI*HYWIID
Trigger: GTCTATTATCCAGTAATGTCAGATCCCTATGGGCAG...GGATTGCAGTGCTATTACCACAGCTACTGGCACTCCATGGTCTATGTGCCACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR GCA 90 bp AACAATAGCATATGGGATAAATCTAAAGCAGAGAACCATGTGCCTTCAAAACTGAGCCAAGCCGCCGCCTaGTCGCCTCCCTCACTCACT +
Preference number: 4 (lower is better)
Translates to: NNSIWDKSKAENHVPSKLSQAAA*SPPSLT
Trigger: AGTGAGTGAGGGAGGCGAGCAGGCGGCGGCTTGGCT...CAGTTTTGAAGGCACATGGTTCTCTGCTTTAGATTTATCCCATATGCTATTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251943.8
ENST00000610588.4
ENST00000621367.4
CDS-3UTR GCA 90 bp AGCATATGGGATAAATCTAAAGCAGAGAACCATGTGCCTTCAAAACTGATATCAAGCCAAGCCGCCGCCTaGTCGCCTCCCTCACTCACT +
Preference number: 4 (lower is better)
Translates to: SIWDKSKAENHVPSKLISSQAAA*SPPSLT
Trigger: AGTGAGTGAGGGAGGCGAGCAGGCGGCGGCTTGGCT...TGATATCAGTTTTGAAGGCACATGGTTCTCTGCTTTAGATTTATCCCATATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251943.8
ENST00000610588.4
ENST00000621367.4
CDS-3UTR GCA 90 bp AGTCTAGGCCTGAAAAGGCAGTTGAAGTCAGCGCTGCAGAATCTTGGCACTTCCACAGCTTCCTGCACCTaGGTGACTAATAACAAGATC +
Preference number: 4 (lower is better)
Translates to: SLGLKRQLKSALQNLGTSTASCT*VTNNKI
Trigger: GATCTTGTTATTAGTCACGCAGGTGCAGGAAGCTGT...GGAAGTGCCAAGATTCTGCAGCGCTGACTTCAACTGCCTTTTCAGGCCTAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000471924.5
ENST00000486353.5
ENST00000495283.5
ENST00000623144.3
ENST00000624161.3
CDS-3UTR GCA 90 bp TTGCCCTCCTCTAAATTCAAAGTCTGTTTGCCTGAGCTATGTCCCCGCCTTCCAGCAGTAACAAGGGCTTaGTTATGCAGGTATCCGGAA +
Preference number: 4 (lower is better)
Translates to: LPSSKFKVCLPELCPRLPAVTRA*LCRYPE
Trigger: TTCCGGATACCTGCATAAGCAAGCCCTTGTTACTGC...TGGAAGGCGGGGACATAGCTCAGGCAAACAGACTTTGAATTTAGAGGAGGGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR GCA 90 bp GGCCTGAAAAGGCAGTTGAAGTCAGCGCTGCAGAATCTTGGCACTTCCCAGGAGGAAACAGCCCTAAGCTaGCTAAATATTCATCCATTG +
Preference number: 4 (lower is better)
Translates to: GLKRQLKSALQNLGTSQEETALS*LNIHPL
Trigger: CAATGGATGAATATTTAGGCAGCTTAGGGCTGTTTC...CTCCTGGGAAGTGCCAAGATTCTGCAGCGCTGACTTCAACTGCCTTTTCAGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000486353.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR GCA 90 bp GCTGCAAAACAACTGCTCCGAAATGGCCCGAAAGAGGCAAGAGGCATCCTTGGCGAAACAGCCCTAAGCTaGCTAAATATTCATCCATTG +
Preference number: 4 (lower is better)
Translates to: AAKQLLRNGPKEARGILGETALS*LNIHPL
Trigger: CAATGGATGAATATTTAGGCAGCTTAGGGCTGTTTC...GCCAAGGATGCCTCTTGCCTCTTTCGGGCCATTTCGGAGCAGTTGTTTTGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000486353.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000624881.3
CDS-3UTR GCA 90 bp CCTGGCTGCAAAACAACTGCTCCGAAATGGCCCGAAAGAGGCAAGAGGCATCCTGAAACAGCCCTAAGCTaGCTAAATATTCATCCATTG +
Preference number: 4 (lower is better)
Translates to: PGCKTTAPKWPERGKRHPETALS*LNIHPL
Trigger: CAATGGATGAATATTTAGGCAGCTTAGGGCTGTTTC...AGGATGCCTCTTGCCTCTTTCGGGCCATTTCGGAGCAGTTGTTTTGCAGCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000486353.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000624881.3
CDS-3UTR GCA 90 bp CCCATATCCCCGACCTTGTCTCGGAGATGGATGCTGAGGATGAAAATGTTCATTGGGCCCGGCATGTTGTaGCTGTTTATAAACCGAGAT +
Preference number: 4 (lower is better)
Translates to: PISPTLSRRWMLRMKMFIGPGML*LFINRD
Trigger: ATCTCGGTTTATAAACAGGCACAACATGCCGGGCCC...AATGAACATTTTCATCCTCAGCATCCATCTCCGAGACAAGGTCGGGGATATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR GCA 90 bp CAGTTGAAGTCAGCGCTGCAGAATCTTGGCACTTCCCAGGAGCAGAAGCAATGGTTTCACTCTGGCCATTaGCCTCCTCTAAATTCAAAG +
Preference number: 4 (lower is better)
Translates to: QLKSALQNLGTSQEQKQWFHSGH*PPLNSK
Trigger: CTTTGAATTTAGAGGAGGGCAATGGCCAGAGTGAAA...CCATTGCTTCTGCTCCTGGGAAGTGCCAAGATTCTGCAGCGCTGACTTCAACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR GCA 90 bp TGCAAAACAACTGCTCCGAAATGGCCCGAAAGAGGCAAGAGGCATCCTTGGCAGCTGAAGAGACAAGTTTaGTGTAGATGCAGTTGTGCT +
Preference number: 4 (lower is better)
Translates to: CKTTAPKWPERGKRHPWQLKRQV*CRCSCA
Trigger: AGCACAACTGCATCTACAGCAAACTTGTCTCTTCAG...CTGCCAAGGATGCCTCTTGCCTCTTTCGGGCCATTTCGGAGCAGTTGTTTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR GCA 90 bp TCAGCGCTGCAGAATCTTGGCACTTCCCAGGAGCAGAAGCAATGGACTTGGCTTGGAAGCTGCAACTGCTaGAATATTTCCCATCATCTT +
Preference number: 4 (lower is better)
Translates to: SALQNLGTSQEQKQWTWLGSCNC*NISHHL
Trigger: AAGATGATGGGAAATATTGCAGCAGTTGCAGCTTCC...AAGCCAAGTCCATTGCTTCTGCTCCTGGGAAGTGCCAAGATTCTGCAGCGCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR GCA 90 bp TCTTCCTTTCCGACTGGGCATAGCATTCCAGGCAGGAACAGACATCACTTGGGTAGAAGAACCACCATATaGTGTACCAACTGGATGCCA +
Preference number: 4 (lower is better)
Translates to: SSFPTGHSIPGRNRHHLGRRTTI*CTNWMP
Trigger: TGGCATCCAGTTGGTACAGCATATGGTGGTTCTTCT...ACCCAAGTGATGTCTGTTCCTGCCTGGAATGCTATGCCCAGTCGGAAAGGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR GCA 90 bp CACCGTTCCTCTACCAATTTGCAGGATAAGTCGGTTGTAACCAAGGCTCTCGATGCCCAGGAAGCGTGCTaGAGGTACAATAGAAGAGAT +
Preference number: 4 (lower is better)
Translates to: HRSSTNLQDKSVVTKALDAQEAC*RYNRRD
Trigger: ATCTCTTCTATTGTACCTGCAGCACGCTTCCTGGGC...ATCGAGAGCCTTGGTTACAACCGACTTATCCTGCAAATTGGTAGAGGAACGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468657.5
ENST00000489033.5
CDS-3UTR GCA 90 bp CTGCTCCATGAGGGACAGATGAAGAATCAGCATTCGGAAAAGTATCATTTGCTGAGGAATCCTTGTACTTaGAGACTGTCGGGCGCCGAC +
Preference number: 4 (lower is better)
Translates to: LLHEGQMKNQHSEKYHLLRNPCT*RLSGAD
Trigger: GTCGGCGCCCGACAGTCTGCAAGTACAAGGATTCCT...CAGCAAATGATACTTTTCCGAATGCTGATTCTTCATCTGTCCCTCATGGAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470971.5
ENST00000624161.3
CDS-3UTR GCA 90 bp AGGTACATAATGAGAAGCTGGGGGAGATGGAGCAATACAGCCAATTGGCCCAGGGCCAGTGGAACAACATaGCTTTGTTTCTTCTGTTCC +
Preference number: 4 (lower is better)
Translates to: RYIMRSWGRWSNTANWPRASGTT*LCFFCS
Trigger: GGAACAGAAGAAACAAAGGCATGTTGTTCCACTGGC...CCTGGGCCAATTGGCTGTATTGCTCCATCTCCCCCAGCTTCTCATTATGTACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636363.1
CDS-3UTR CCA 90 bp GCTGCAAAACAACTGCTCCGAAATGGCCCGAAAGAGGCAAGAGGCATCCTTGGCTATAACCACTACGAGTaGCTTTCCTTTTTCCAGAGT +
Preference number: 4 (lower is better)
Translates to: AAKQLLRNGPKEARGILGYNHYE*LSFFQS
Trigger: ACTCTGGAAAAAGGAAAGCCACTCGTAGTGGTTATA...GCCAAGGATGCCTCTTGCCTCTTTCGGGCCATTTCGGAGCAGTTGTTTTGCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000486353.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000624881.3
CDS-3UTR CCA 90 bp CCAAGGCTCTCGATTTTCTGTGGTAGAGTTGCGGGGGTTTCTTTCCGAGCGCGATATAACCACTACGAGTaGCTTTCCTTTTTCCAGAGT +
Preference number: 4 (lower is better)
Translates to: PRLSIFCGRVAGVSFRARYNHYE*LSFFQS
Trigger: ACTCTGGAAAAAGGAAAGCCACTCGTAGTGGTTATA...TCGCGCTCGGAAAGAAACCCCCGCAACTCTACCACAGAAAATCGAGAGCCTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000468657.5
ENST00000471924.5
ENST00000489033.5
ENST00000622997.3
ENST00000623144.3
ENST00000623148.3
CDS-3UTR CCA 90 bp AGCAGAGAACCATGTGCCTTCAAAACTGATATCACAGAATGCAACTGGCTTCAGCAGGAGCAGAAGCAATaGACTTGGCTTGCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: SREPCAFKTDITECNWLQQEQKQ*TWLAQD
Trigger: GTCCTGGGCAAGCCAAGTCCATTGCTTCTGCTCCTG...CTGAAGCCAGTTGCATTCTGTGATATCAGTTTTGAAGGCACATGGTTCTCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000251943.8
ENST00000394780.8
ENST00000436609.5
ENST00000610588.4
ENST00000621367.4
ENST00000624161.3
ENST00000636363.1
CDS-3UTR CCA 90 bp GCAGAGAACCATGTGCCTTCAAAACTGATATCACAGAATGCAACTGGCTTCAGACAGGAGCAGAAGCAATaGACTTGGCTTGCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: AENHVPSKLISQNATGFRQEQKQ*TWLAQD
Trigger: GTCCTGGGCAAGCCAAGTCCATTGCTTCTGCTCCTG...TCTGAAGCCAGTTGCATTCTGTGATATCAGTTTTGAAGGCACATGGTTCTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000251943.8
ENST00000394780.8
ENST00000436609.5
ENST00000610588.4
ENST00000621367.4
ENST00000624161.3
ENST00000636363.1
CDS-3UTR CCA 90 bp CTGCTCCATGAGGGACAGATGAAGAATCAGCATTCGGAAAAGTATCATTTGCTGCAGGAGCAGAAGCAATaGACTTGGCTTGCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: LLHEGQMKNQHSEKYHLLQEQKQ*TWLAQD
Trigger: GTCCTGGGCAAGCCAAGTCCATTGCTTCTGCTCCTG...CAGCAAATGATACTTTTCCGAATGCTGATTCTTCATCTGTCCCTCATGGAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR CCA 90 bp CTTCCTGATTTCCAAATGATGGACCTGGCTGCAAAACAACTGCTCCGAAATGGCGGCAAGAGGCATCCTTaGCAGTCAGCTTTCGAAACA +
Preference number: 4 (lower is better)
Translates to: LPDFQMMDLAAKQLLRNGGKRHP*QSAFET
Trigger: TGTTTCGAAAGCTGACTGCCAAGGATGCCTCTTGCC...GCCATTTCGGAGCAGTTGTTTTGCAGCCAGGTCCATCATTTGGAAATCAGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000624881.3
CDS-3UTR CCA 90 bp CTTGGGATCTCCCAACCGTTCCAGGTATTTCTCAAAAGATCCCTCCACATAAGAACAACTGCTCCGAAATaGCCCGAAAGAGGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: LGISQPFQVFLKRSLHIRTTAPK*PERGKR
Trigger: CCTCTTGCCTCTTTCGGGCCATTTCGGAGCAGTTGT...TCTTATGTGGAGGGATCTTTTGAGAAATACCTGGAACGGTTGGGAGATCCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000624881.3
CDS-3UTR CCA 90 bp ACTTTCCTTGGGATCTCCCAACCGTTCCAGGTATTTCTCAAAAGATCCCTCCACGCTCTTATTTCCAGCTaGCCAGCACTTTCCTTGGGA +
Preference number: 4 (lower is better)
Translates to: TFLGISQPFQVFLKRSLHALISS*PALSLG
Trigger: TCCCAAGGAAAGTGCTGGCCAGCTGGAAATAAGAGC...GTGGAGGGATCTTTTGAGAAATACCTGGAACGGTTGGGAGATCCCAAGGAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000487141.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR CCA 90 bp CAGTTGAAGTCAGCGCTGCAGAATCTTGGCACTTCCCAGGAGCAGAAGCAATGGATCTGTGACATAAGTTaGAGGTTTTCCAGGAAAGCG +
Preference number: 4 (lower is better)
Translates to: QLKSALQNLGTSQEQKQWICDIS*RFSRKA
Trigger: CGCTTTCCTGGAAAACCTCCAACTTATGTCACAGAT...CCATTGCTTCTGCTCCTGGGAAGTGCCAAGATTCTGCAGCGCTGACTTCAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR CCA 90 bp ATGAATTCCTGGGCATCCCATATCCCCGACCTTGTCTCGGAGATGGATGCTGAGATCTGTGACATAAGTTaGAGGTTTTCCAGGAAAGCG +
Preference number: 4 (lower is better)
Translates to: MNSWASHIPDLVSEMDAEICDIS*RFSRKA
Trigger: CGCTTTCCTGGAAAACCTCCAACTTATGTCACAGAT...CTCAGCATCCATCTCCGAGACAAGGTCGGGGATATGGGATGCCCAGGAATTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR CCA 90 bp TTGCCTGAGCTATGTCCCCGCCTTCCAACACAGTATCCTGAAGTAGCAGGAACCATTACGATAGATTTCTaGATCCAGGGCTTTGAGCAC +
Preference number: 4 (lower is better)
Translates to: LPELCPRLPTQYPEVAGTITIDF*IQGFEH
Trigger: GTGCTCAAAGCCCTGGATCCAGAAATCTATCGTAAT...GGTTCCTGCTACTTCAGGATACTGTGTTGGAAGGCGGGGACATAGCTCAGGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR CCA 90 bp TGGGCATCCCATATCCCCGACCTTGTCTCGGAGATGGATGCTGAGGATGAAAATACCTTGTCTCGGAGATaGATGCTGAGGATGAAAATG +
Preference number: 4 (lower is better)
Translates to: WASHIPDLVSEMDAEDENTLSRR*MLRMKM
Trigger: CATTTTCATCCTCAGCATCCATCTCCGAGACAAGGT...ATTTTCATCCTCAGCATCCATCTCCGAGACAAGGTCGGGGATATGGGATGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR CCA 90 bp GGCCATTGCCCTCCTCTAAATTCAAAGTCTGTTTGCCTGAGCTATGTCCCCGCCCCTTTTACCTGGGCCTaGGTAAAAATCAACTTTAGG +
Preference number: 4 (lower is better)
Translates to: GHCPPLNSKSVCLSYVPAPFTWA*VKINFR
Trigger: CCTAAAGTTGATTTTTACCCAGGCCCAGGTAAAAGG...GGCGGGGACATAGCTCAGGCAAACAGACTTTGAATTTAGAGGAGGGCAATGGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR CCA 90 bp TATGCAGGTATCCGGAAAGCAGCCCAAAGTCTAGGCCTGAAAAGGCAGTTGAAGCATCTGTCCATTCCCTaGGGTAAATCCATACTGGGA +
Preference number: 4 (lower is better)
Translates to: YAGIRKAAQSLGLKRQLKHLSIP*GKSILG
Trigger: TCCCAGTATGGATTTACCCCAGGGAATGGACAGATG...CTTCAACTGCCTTTTCAGGCCTAGACTTTGGGCTGCTTTCCGGATACCTGCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR CCA 90 bp GGAATAATCTGGCACAACCGGAAGGCAGGAGTCAAAACCTGGCAAAGGTGGCTGTTGATCTACCAGAGGTaGCTCAGTATAGACTGGATA +
Preference number: 4 (lower is better)
Translates to: GIIWHNRKAGVKTWQRWLLIYQR*LSIDWI
Trigger: TATCCAGTCTATACTGAGCCACCTCTGGTAGATCAA...CAGCCACCTTTGCCAGGTTTTGACTCCTGCCTTCCGGTTGTGCCAGATTATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR CCA 90 bp CTGAAAAGGCAGTTGAAGTCAGCGCTGCAGAATCTTGGCACTTCCCAGGAGCAGTTGATCTACCAGAGGTaGCTCAGTATAGACTGGATA +
Preference number: 4 (lower is better)
Translates to: LKRQLKSALQNLGTSQEQLIYQR*LSIDWI
Trigger: TATCCAGTCTATACTGAGCCACCTCTGGTAGATCAA...CTGCTCCTGGGAAGTGCCAAGATTCTGCAGCGCTGACTTCAACTGCCTTTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR CCA 90 bp GCTTATGCAGGTATCCGGAAAGCAGCCCAAAGTCTAGGCCTGAAAAGGCAGTTGAGCAATACAGCCAATTaGCCCAGGATTTATAGCACC +
Preference number: 4 (lower is better)
Translates to: AYAGIRKAAQSLGLKRQLSNTAN*PRIYST
Trigger: GGTGCTATAAATCCTGGGCCAATTGGCTGTATTGCT...CAACTGCCTTTTCAGGCCTAGACTTTGGGCTGCTTTCCGGATACCTGCATAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR CCA 90 bp AGCAGCCCAAAGTCTAGGCCTGAAAAGGCAGTTGAAGTCAGCGCTGCAGAATCTAGCAATACAGCCAATTaGCCCAGGATTTATAGCACC +
Preference number: 4 (lower is better)
Translates to: SSPKSRPEKAVEVSAAESSNTAN*PRIYST
Trigger: GGTGCTATAAATCCTGGGCCAATTGGCTGTATTGCT...AGATTCTGCAGCGCTGACTTCAACTGCCTTTTCAGGCCTAGACTTTGGGCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR CCA 90 bp CCTGAGGTACATAATGAGAAGCTGGGGGAGATGGAGCAATACAGCCAATTGGCCAGCAATACAGCCAATTaGCCCAGGATTTATAGCACC +
Preference number: 4 (lower is better)
Translates to: PEVHNEKLGEMEQYSQLASNTAN*PRIYST
Trigger: GGTGCTATAAATCCTGGGCCAATTGGCTGTATTGCT...GGCCAATTGGCTGTATTGCTCCATCTCCCCCAGCTTCTCATTATGTACCTCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR CCA 90 bp CCCTGCAGGTACAATAGAAGAGATGACCCTCTTTGTGTAGCTGCTTTGCCAGTTAGAAGCTGGGGGAGATaGAGCAATACAGCCAATTGG +
Preference number: 4 (lower is better)
Translates to: PCRYNRRDDPLCVAALPVRSWGR*SNTANW
Trigger: CCAATTGGCTGTATTGCTCCATCTCCCCCAGCTTCT...AACTGGCAAAGCAGCTACACAAAGAGGGTCATCTCTTCTATTGTACCTGCAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR CCA 90 bp CCTGGCTGCAAAACAACTGCTCCGAAATGGCCCGAAAGAGGCAAGAGGCATCCTAATACTTCATACTGCTaGATCTTACATACCCTGAGG +
Preference number: 4 (lower is better)
Translates to: PGCKTTAPKWPERGKRHPNTSYC*ILHTLR
Trigger: CCTCAGGGTATGTAAGATCCAGCAGTATGAAGTATT...AGGATGCCTCTTGCCTCTTTCGGGCCATTTCGGAGCAGTTGTTTTGCAGCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR CCA 90 bp ACAACTGCTCCGAAATGGCCCGAAAGAGGCAAGAGGCATCCTTGGCAGTCAGCTTATAAAGCTGACAAATaGCTGACAGGAAAACAGCTG +
Preference number: 4 (lower is better)
Translates to: TTAPKWPERGKRHPWQSAYKADK*LTGKQL
Trigger: CAGCTGTTTTCCTGTCAGCCATTTGTCAGCTTTATA...AGCTGACTGCCAAGGATGCCTCTTGCCTCTTTCGGGCCATTTCGGAGCAGTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623144.3
ENST00000624161.3
CDS-3UTR CCA 90 bp ATAATCTGGCACAACCGGAAGGCAGGAGTCAAAACCTGGCAAAGGTGGCTGCCCTATAAAGCTGACAAATaGCTGACAGGAAAACAGCTG +
Preference number: 4 (lower is better)
Translates to: IIWHNRKAGVKTWQRWLPYKADK*LTGKQL
Trigger: CAGCTGTTTTCCTGTCAGCCATTTGTCAGCTTTATA...GGGCAGCCACCTTTGCCAGGTTTTGACTCCTGCCTTCCGGTTGTGCCAGATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000470971.5
ENST00000623144.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR CCA 90 bp AGGTACAATAGAAGAGATGACCCTCTTTGTGTAGCTGCTTTGCCAGTTCCAGCTAGCGTGCTGGCCCTTTaGCAAGCTTCTAGTGTCTCA +
Preference number: 4 (lower is better)
Translates to: RYNRRDDPLCVAALPVPASVLAL*QASSVS
Trigger: TGAGACACTAGAAGCTTGCCAAAGGGCCAGCACGCT...AGCTGGAACTGGCAAAGCAGCTACACAAAGAGGGTCATCTCTTCTATTGTACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492038.5
3UTR CAA 72 bp ACTGAAGGGTTCAGGTACCACCGTTCCTCTACCAATTaGCAGGATAAGTCGGTTGTAACCAAGGCTCTCGAT +
Preference number: 4 (lower is better)
Translates to: TEGFRYHRSSTN*QDKSVVTKALD
Trigger: ATCGAGAGCCTTGGTTACAACCGACTTATCCTGCAAATTGGTAGAGGAACGGTGGTACCTGAACCCTTCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000468657.5
ENST00000471924.5
ENST00000489033.5
ENST00000622997.3
ENST00000623144.3
ENST00000623148.3
CDS-3UTR TCA 90 bp CGTACAATACAGCCTGACAAACAGCTGCACTTGACTGAAATTGTTTTGAGTACACCGACACACACGCAATaGGGTCGTCAAAGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: RTIQPDKQLHLTEIVLSTPTHTQ*GRQSWW
Trigger: CCACCAGCTTTGACGACCTCATTGCGTGTGTGTCGG...TGTACTCAAAACAATTTCAGTCAAGTGCAGCTGTTTGTCAGGCTGTATTGTACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR TCA 90 bp GGAATAATCTGGCACAACCGGAAGGCAGGAGTCAAAACCTGGCAAAGGTGGCTGATTTTCCCTCATATATaGGACACAAGCCTTCCTGAT +
Preference number: 4 (lower is better)
Translates to: GIIWHNRKAGVKTWQRWLIFPHI*DTSLPD
Trigger: ATCAGGAAGGCTTGTGTCTCATATATGAGGGAAAAT...CAGCCACCTTTGCCAGGTTTTGACTCCTGCCTTCCGGTTGTGCCAGATTATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR TCA 90 bp TGCAAAACAACTGCTCCGAAATGGCCCGAAAGAGGCAAGAGGCATCCTTGGCAGATTTTCCCTCATATATaGGACACAAGCCTTCCTGAT +
Preference number: 4 (lower is better)
Translates to: CKTTAPKWPERGKRHPWQIFPHI*DTSLPD
Trigger: ATCAGGAAGGCTTGTGTCTCATATATGAGGGAAAAT...CTGCCAAGGATGCCTCTTGCCTCTTTCGGGCCATTTCGGAGCAGTTGTTTTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000624881.3
CDS-3UTR TCA 90 bp GTGAGTAGTGCATTGGAGGATCGTGCCCATAATGCATACTGTGCTGCAGCCTGGCATAGCCATTATCTGTaGCATAAGTTGGAGGTTTTC +
Preference number: 4 (lower is better)
Translates to: VSSALEDRAHNAYCAAAWHSHYL*HKLEVF
Trigger: GAAAACCTCCAACTTATGTCACAGATAATGGCTATG...CCAGGCTGCAGCACAGTATGCATTATGGGCACGATCCTCCAATGCACTACTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR TCA 90 bp ACAACTGCTCCGAAATGGCCCGAAAGAGGCAAGAGGCATCCTTGGCAGTCAGCTATAATATCTTCCTTCTaGTTCCAAGCAAACCTGACA +
Preference number: 4 (lower is better)
Translates to: TTAPKWPERGKRHPWQSAIISSF*FQANLT
Trigger: TGTCAGGTTTGCTTGGAATCAGAAGGAAGATATTAT...AGCTGACTGCCAAGGATGCCTCTTGCCTCTTTCGGGCCATTTCGGAGCAGTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR TCA 90 bp TGCAAAACAACTGCTCCGAAATGGCCCGAAAGAGGCAAGAGGCATCCTTGGCAGCTTTATGTCCATCTCTaGTATAACTATTTCCGGGAC +
Preference number: 4 (lower is better)
Translates to: CKTTAPKWPERGKRHPWQLYVHL*YNYFRD
Trigger: GTCCCGGAAATAGTTATATCAGAGATGGACATAAAG...CTGCCAAGGATGCCTCTTGCCTCTTTCGGGCCATTTCGGAGCAGTTGTTTTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR TCA 90 bp TGCAAAACAACTGCTCCGAAATGGCCCGAAAGAGGCAAGAGGCATCCTTGGCAGTCCCTCGAATTTTCTTaGACATCTTCTTCTGTTGCT +
Preference number: 4 (lower is better)
Translates to: CKTTAPKWPERGKRHPWQSLEFS*TSSSVA
Trigger: AGCAACAGAAGAAGATGTTCAAGAAAATTCGAGGGA...CTGCCAAGGATGCCTCTTGCCTCTTTCGGGCCATTTCGGAGCAGTTGTTTTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR TCA 90 bp AGTCAAAACCTGGCAAAGGTGGCTGCCCATAGGGATCTGACATTACTGGATAATATTGCCAGCTGTCTGTaGGTAGTGCATTGGAGGATC +
Preference number: 4 (lower is better)
Translates to: SQNLAKVAAHRDLTLLDNIASCL*VVHWRI
Trigger: GATCCTCCAATGCACTACTCACAGACAGCTGGCAAT...ATTATCCAGTAATGTCAGATCCCTATGGGCAGCCACCTTTGCCAGGTTTTGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR TCA 90 bp ACTTTCCTTGGGATCTCCCAACCGTTCCAGGTATTTCTCAAAAGATCCCTCCACCAACTCATCTGGCGGTaGCTACGTCTAAATGAACGA +
Preference number: 4 (lower is better)
Translates to: TFLGISQPFQVFLKRSLHQLIWR*LRLNER
Trigger: TCGTTCATTTAGACGTAGTCACCGCCAGATGAGTTG...GTGGAGGGATCTTTTGAGAAATACCTGGAACGGTTGGGAGATCCCAAGGAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR TCA 90 bp CAAATGGCTGACAGGAAAACAGCTGAATACAATGAAGTATGCTCAATATGGGGCCAAAGTCTGTTTGCCTaGGCTATGTCCCCGCCTTCC +
Preference number: 4 (lower is better)
Translates to: QMADRKTAEYNEVCSIWGQSLFA*AMSPPS
Trigger: GGAAGGCGGGGACATAGCTCAGGCAAACAGACTTTG...GCCCCATATTGAGCATACTTCATTGTATTCAGCTGTTTTCCTGTCAGCCATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000251943.8
ENST00000394780.8
ENST00000436609.5
ENST00000470971.5
ENST00000610588.4
ENST00000621367.4
ENST00000623144.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR TCA 90 bp GAAAAGGCAGTTGAAGTCAGCGCTGCAGAATCTTGGCACTTCCCAGGAGCAGAATGTGCTATAAACACCTaGAGTTTCATAGTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: EKAVEVSAAESWHFPGAECAINT*SFIVWL
Trigger: GAGCCAGACTATGAAACTTCAGGTGTTTATAGCACA...TTCTGCTCCTGGGAAGTGCCAAGATTCTGCAGCGCTGACTTCAACTGCCTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR TCA 90 bp GAAAAGGCAGTTGAAGTCAGCGCTGCAGAATCTTGGCACTTCCCAGGAGCAGAAAGGAGACATAGAACATaGCTTTCTGTCCTGAAGAGA +
Preference number: 4 (lower is better)
Translates to: EKAVEVSAAESWHFPGAERRHRT*LSVLKR
Trigger: TCTCTTCAGGACAGAAAGTCATGTTCTATGTCTCCT...TTCTGCTCCTGGGAAGTGCCAAGATTCTGCAGCGCTGACTTCAACTGCCTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR TCA 90 bp AAAAGCAGGGTGCAGGTAGGATGGGTAGCAGTAACAAGGGCTTGCTTATGCAGGAGGAGACATAGAACATaGCTTTCTGTCCTGAAGAGA +
Preference number: 4 (lower is better)
Translates to: KSRVQVGWVAVTRACLCRRRHRT*LSVLKR
Trigger: TCTCTTCAGGACAGAAAGTCATGTTCTATGTCTCCT...CCTGCATAAGCAAGCCCTTGTTACTGCTACCCATCCTACCTGCACCCTGCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR TCA 90 bp ATTTTCTGTGGTAGAGTTGCGGGGGTTTCTTTCCGAGCGCGACGGTCAGGCAAGTCACATTACATAGGTTaGATTTGGGGGTTGCTTTTA +
Preference number: 4 (lower is better)
Translates to: IFCGRVAGVSFRARRSGKSHYIG*IWGLLL
Trigger: TAAAAGCAACCCCCAAATTCAACCTATGTAATGTGA...CTTGCCTGACCGTCGCGCTCGGAAAGAAACCCCCGCAACTCTACCACAGAAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000468657.5
ENST00000489033.5
CDS-3UTR TCA 90 bp CGAAATGGCCCGAAAGAGGCAAGAGGCATCCTTGGCAGTCAGCTTTCGAAACAGAAAACTTTTGTATCTTaGGGCAAATCACTGCCGCTT +
Preference number: 4 (lower is better)
Translates to: RNGPKEARGILGSQLSKQKTFVS*GKSLPL
Trigger: AAGCGGCAGTGATTTGCCTCAAGATACAAAAGTTTT...CTGTTTCGAAAGCTGACTGCCAAGGATGCCTCTTGCCTCTTTCGGGCCATTTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623148.3
CDS-3UTR GCA 90 bp GCCTTCAAAACTGATATCACAGAATGCAACTGGCTTCAGATAATTCTCAAGAAACCTCCCTCACTCACTTaGAGACTGTCGGGCGCCGAC +
Preference number: 4 (lower is better)
Translates to: AFKTDITECNWLQIILKKPPSLT*RLSGAD
Trigger: GTCGGCGCCCGACAGTCTGCAAGTGAGTGAGGGAGG...TTTCTTGAGAATTATCTGAAGCCAGTTGCATTCTGTGATATCAGTTTTGAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251943.8
ENST00000610588.4
ENST00000621367.4
CDS-3UTR GCA 90 bp ACTGCAATTAGGATTTGGACCCAATGCAAATGTGCACAACATAAAATTTCCTATAGCCAAGCCGCCGCCTaGTCGCCTCCCTCACTCACT +
Preference number: 4 (lower is better)
Translates to: TAIRIWTQCKCAQHKISYSQAAA*SPPSLT
Trigger: AGTGAGTGAGGGAGGCGAGCAGGCGGCGGCTTGGCT...ATAGGAAATTTTATGTTGTGCACATTTGCATTGGGTCCAAATCCTAATTGCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468657.5
ENST00000489033.5
CDS-3UTR GCA 90 bp AGTCAAAACCTGGCAAAGGTGGCTGCCCATAGGGATCTGACATTACTGGATAATACAAGGGCTTGCTTATaGAGGTATCCGGAAAGCAGC +
Preference number: 4 (lower is better)
Translates to: SQNLAKVAAHRDLTLLDNTRACL*RYPESS
Trigger: GCTGCTTTCCGGATACCTGCATAAGCAAGCCCTTGT...ATTATCCAGTAATGTCAGATCCCTATGGGCAGCCACCTTTGCCAGGTTTTGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR GCA 90 bp TTCCAGGCAGGAACAGACATCACTTGGGTAACTGGTTTTAAGTTAGCCAGTGGAGGGCCCGGCATGTTGTaGCTGTTTATAAACCGAGAT +
Preference number: 4 (lower is better)
Translates to: FQAGTDITWVTGFKLASGGPGML*LFINRD
Trigger: ATCTCGGTTTATAAACAGGCACAACATGCCGGGCCC...TCCACTGGCTAACTTAAAACCAGTTACCCAAGTGATGTCTGTTCCTGCCTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR GCA 90 bp CACTGTAGCATTGAGGAACGGTTTGATCTACCAGAGGTGGCTCAGTATAGACTGAATTCAAAGTCTGTTTaGCTGAGCTATGTCCCCGCC +
Preference number: 4 (lower is better)
Translates to: HCSIEERFDLPEVAQYRLNSKSV*LSYVPA
Trigger: GGCGGGGACATAGCTCAGGCAAACAGACTTTGAATT...CAGTCTATACTGAGCCACCTCTGGTAGATCAAACCGTTCCTCAATGCTACAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR GCA 90 bp AAAACAACTGCTCCGAAATGGCCCGAAAGAGGCAAGAGGCATCCTTGGCAGTCATTTCACTCTGGCCATTaGCCTCCTCTAAATTCAAAG +
Preference number: 4 (lower is better)
Translates to: KTTAPKWPERGKRHPWQSFHSGH*PPLNSK
Trigger: CTTTGAATTTAGAGGAGGGCAATGGCCAGAGTGAAA...TGACTGCCAAGGATGCCTCTTGCCTCTTTCGGGCCATTTCGGAGCAGTTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR GCA 90 bp CCCGAAAGAGGCAAGAGGCATCCTTGGCAGTCAGCTTTCGAAACAGCCCTAAGCTTCATAGTCTGGCTCTaGACGATAAAGATATTCTTC +
Preference number: 4 (lower is better)
Translates to: PERGKRHPWQSAFETALSFIVWL*TIKIFF
Trigger: GAAGAATATCTTTATCGTGCAGAGCCAGACTATGAA...GCTTAGGGCTGTTTCGAAAGCTGACTGCCAAGGATGCCTCTTGCCTCTTTCGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR GCA 90 bp TCTTCCTTTCCGACTGGGCATAGCATTCCAGGCAGGAACAGACATCACTTGGGTCTGAAGAGACAAGTTTaGTGTAGATGCAGTTGTGCT +
Preference number: 4 (lower is better)
Translates to: SSFPTGHSIPGRNRHHLGLKRQV*CRCSCA
Trigger: AGCACAACTGCATCTACAGCAAACTTGTCTCTTCAG...ACCCAAGTGATGTCTGTTCCTGCCTGGAATGCTATGCCCAGTCGGAAAGGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR GCA 90 bp GGCAAGAGGCATCCTTGGCAGTCAGCTTTCGAAACAGCCCTAAGCTGCCTAAATCTGAAGAGACAAGTTTaGTGTAGATGCAGTTGTGCT +
Preference number: 4 (lower is better)
Translates to: GKRHPWQSAFETALSCLNLKRQV*CRCSCA
Trigger: AGCACAACTGCATCTACAGCAAACTTGTCTCTTCAG...ATTTAGGCAGCTTAGGGCTGTTTCGAAAGCTGACTGCCAAGGATGCCTCTTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR GCA 90 bp TTGAAGTCAGCGCTGCAGAATCTTGGCACTTCCCAGGAGCAGAAGCAATGGACTCTGAAGAGACAAGTTTaGTGTAGATGCAGTTGTGCT +
Preference number: 4 (lower is better)
Translates to: LKSALQNLGTSQEQKQWTLKRQV*CRCSCA
Trigger: AGCACAACTGCATCTACAGCAAACTTGTCTCTTCAG...AGTCCATTGCTTCTGCTCCTGGGAAGTGCCAAGATTCTGCAGCGCTGACTTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR GCA 90 bp CCGACTGGGCATAGCATTCCAGGCAGGAACAGACATCACTTGGGTAACTGGTTTGGAAGCTGCAACTGCTaGAATATTTCCCATCATCTT +
Preference number: 4 (lower is better)
Translates to: PTGHSIPGRNRHHLGNWFGSCNC*NISHHL
Trigger: AAGATGATGGGAAATATTGCAGCAGTTGCAGCTTCC...AAACCAGTTACCCAAGTGATGTCTGTTCCTGCCTGGAATGCTATGCCCAGTCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR GCA 90 bp TCTGGCCATTGCCCTCCTCTAAATTCAAAGTCTGTTTGCCTGAGCTATGTCCCCAGAAGAACCACCATATaGTGTACCAACTGGATGCCA +
Preference number: 4 (lower is better)
Translates to: SGHCPPLNSKSVCLSYVPRRTTI*CTNWMP
Trigger: TGGCATCCAGTTGGTACAGCATATGGTGGTTCTTCT...GGGGACATAGCTCAGGCAAACAGACTTTGAATTTAGAGGAGGGCAATGGCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR GCA 90 bp TTGCCCTCCTCTAAATTCAAAGTCTGTTTGCCTGAGCTATGTCCCCGCCTTCCAAGAAGAACCACCATATaGTGTACCAACTGGATGCCA +
Preference number: 4 (lower is better)
Translates to: LPSSKFKVCLPELCPRLPRRTTI*CTNWMP
Trigger: TGGCATCCAGTTGGTACAGCATATGGTGGTTCTTCT...TGGAAGGCGGGGACATAGCTCAGGCAAACAGACTTTGAATTTAGAGGAGGGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR GCA 90 bp ATAATCTGGCACAACCGGAAGGCAGGAGTCAAAACCTGGCAAAGGTGGCTGCCCAAGAATACTTCATACTaGTGGATCTTACATACCCTG +
Preference number: 4 (lower is better)
Translates to: IIWHNRKAGVKTWQRWLPKNTSY*WILHTL
Trigger: CAGGGTATGTAAGATCCAGCAGTATGAAGTATTCTT...GGGCAGCCACCTTTGCCAGGTTTTGACTCCTGCCTTCCGGTTGTGCCAGATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000470971.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR GCA 90 bp TCCACAAAAGGGAAGTCAGAGGCGTTACTGCACACAATTGACAACAACGGCTTAGCCCAGGAAGCGTGCTaGAGGTACAATAGAAGAGAT +
Preference number: 4 (lower is better)
Translates to: STKGKSEALLHTIDNNGLAQEAC*RYNRRD
Trigger: ATCTCTTCTATTGTACCTGCAGCACGCTTCCTGGGC...TAAGCCGTTGTTGTCAATTGTGTGCAGTAACGCCTCTGACTTCCCTTTTGTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371979.7
CDS-3UTR GCA 90 bp CCCATATCCCCGACCTTGTCTCGGAGATGGATGCTGAGGATGAAAATGTTCATTCTTGAGGCAAATCACTaGCGCTTGGATCACAGGAAT +
Preference number: 4 (lower is better)
Translates to: PISPTLSRRWMLRMKMFILEANH*RLDHRN
Trigger: ATTCCTGTGATCCAAGCGGCAGTGATTTGCCTCAAG...AATGAACATTTTCATCCTCAGCATCCATCTCCGAGACAAGGTCGGGGATATGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000470971.5
ENST00000623148.3
CDS-3UTR GCA 90 bp AGGTACATAATGAGAAGCTGGGGGAGATGGAGCAATACAGCCAATTGGCCCAGGGATCCCTCCACATACTaGAGGTACAATAGAAGAGAT +
Preference number: 4 (lower is better)
Translates to: RYIMRSWGRWSNTANWPRDPSTY*RYNRRD
Trigger: ATCTCTTCTATTGTACCTGCAGTATGTGGAGGGATC...CCTGGGCCAATTGGCTGTATTGCTCCATCTCCCCCAGCTTCTCATTATGTACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470971.5
CDS-3UTR CCA 90 bp AGAGAACCATGTGCCTTCAAAACTGATATCACAGAATGCAACTGGCTTCAGATACAAACACGCACTTCATaGCGCGGGTTCCTCAAGCCC +
Preference number: 4 (lower is better)
Translates to: REPCAFKTDITECNWLQIQTRTS*RGFLKP
Trigger: GGGCTTGAGGAACCCGCGCCATGAAGTGCGTGTTTG...TATCTGAAGCCAGTTGCATTCTGTGATATCAGTTTTGAAGGCACATGGTTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000251943.8
ENST00000394780.8
ENST00000610588.4
ENST00000621367.4
ENST00000624161.3
ENST00000636363.1
CDS-3UTR CCA 90 bp AAATGGCCCGAAAGAGGCAAGAGGCATCCTTGGCAGTCAGCTTTCGAAACAGCCTATAACCACTACGAGTaGCTTTCCTTTTTCCAGAGT +
Preference number: 4 (lower is better)
Translates to: KWPERGKRHPWQSAFETAYNHYE*LSFFQS
Trigger: ACTCTGGAAAAAGGAAAGCCACTCGTAGTGGTTATA...GGCTGTTTCGAAAGCTGACTGCCAAGGATGCCTCTTGCCTCTTTCGGGCCATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000486353.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000624881.3
CDS-3UTR CCA 90 bp TGGGCATCCCATATCCCCGACCTTGTCTCGGAGATGGATGCTGAGGATGAAAATATCTGTGACATAAGTTaGAGGTTTTCCAGGAAAGCG +
Preference number: 4 (lower is better)
Translates to: WASHIPDLVSEMDAEDENICDIS*RFSRKA
Trigger: CGCTTTCCTGGAAAACCTCCAACTTATGTCACAGAT...ATTTTCATCCTCAGCATCCATCTCCGAGACAAGGTCGGGGATATGGGATGCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR CCA 90 bp TCTTCCTTTCCGACTGGGCATAGCATTCCAGGCAGGAACAGACATCACTTGGGTATCTGTGACATAAGTTaGAGGTTTTCCAGGAAAGCG +
Preference number: 4 (lower is better)
Translates to: SSFPTGHSIPGRNRHHLGICDIS*RFSRKA
Trigger: CGCTTTCCTGGAAAACCTCCAACTTATGTCACAGAT...ACCCAAGTGATGTCTGTTCCTGCCTGGAATGCTATGCCCAGTCGGAAAGGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR CCA 90 bp AAAAGCAGGGTGCAGGTAGGATGGGTAGCAGTAACAAGGGCTTGCTTATGCAGGATTACGATAGATTTCTaGATCCAGGGCTTTGAGCAC +
Preference number: 4 (lower is better)
Translates to: KSRVQVGWVAVTRACLCRITIDF*IQGFEH
Trigger: GTGCTCAAAGCCCTGGATCCAGAAATCTATCGTAAT...CCTGCATAAGCAAGCCCTTGTTACTGCTACCCATCCTACCTGCACCCTGCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR CCA 90 bp AGCCCAAAGTCTAGGCCTGAAAAGGCAGTTGAAGTCAGCGCTGCAGAATCTTGGATTACGATAGATTTCTaGATCCAGGGCTTTGAGCAC +
Preference number: 4 (lower is better)
Translates to: SPKSRPEKAVEVSAAESWITIDF*IQGFEH
Trigger: GTGCTCAAAGCCCTGGATCCAGAAATCTATCGTAAT...CCAAGATTCTGCAGCGCTGACTTCAACTGCCTTTTCAGGCCTAGACTTTGGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR CCA 90 bp TATCCGGAAAGCAGCCCAAAGTCTAGGCCTGAAAAGGCAGTTGAAGTCAGCGCTATTACGATAGATTTCTaGATCCAGGGCTTTGAGCAC +
Preference number: 4 (lower is better)
Translates to: YPESSPKSRPEKAVEVSAITIDF*IQGFEH
Trigger: GTGCTCAAAGCCCTGGATCCAGAAATCTATCGTAAT...AGCGCTGACTTCAACTGCCTTTTCAGGCCTAGACTTTGGGCTGCTTTCCGGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR CCA 90 bp AATCTGGCACAACCGGAAGGCAGGAGTCAAAACCTGGCAAAGGTGGCTGCCCATGGAACAGACATCACTTaGGTAACTGGTTTTAAGTTA +
Preference number: 4 (lower is better)
Translates to: NLAQPEGRSQNLAKVAAHGTDIT*VTGFKL
Trigger: TAACTTAAAACCAGTTACCCAAGTGATGTCTGTTCC...ATGGGCAGCCACCTTTGCCAGGTTTTGACTCCTGCCTTCCGGTTGTGCCAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR CCA 90 bp CAACTGCTCCGAAATGGCCCGAAAGAGGCAAGAGGCATCCTTGGCAGTCAGCTTGGAACAGACATCACTTaGGTAACTGGTTTTAAGTTA +
Preference number: 4 (lower is better)
Translates to: QLLRNGPKEARGILGSQLGTDIT*VTGFKL
Trigger: TAACTTAAAACCAGTTACCCAAGTGATGTCTGTTCC...AAGCTGACTGCCAAGGATGCCTCTTGCCTCTTTCGGGCCATTTCGGAGCAGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR CCA 90 bp TATGCAGGTATCCGGAAAGCAGCCCAAAGTCTAGGCCTGAAAAGGCAGTTGAAGACCTTGTCTCGGAGATaGATGCTGAGGATGAAAATG +
Preference number: 4 (lower is better)
Translates to: YAGIRKAAQSLGLKRQLKTLSRR*MLRMKM
Trigger: CATTTTCATCCTCAGCATCCATCTCCGAGACAAGGT...CTTCAACTGCCTTTTCAGGCCTAGACTTTGGGCTGCTTTCCGGATACCTGCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR CCA 90 bp TATAAGAGAAGTTATCATAGCTCTGGCAGCACCTTTTACCTGGGCCTGGGTAAAACCGAGATGAATTCCTaGGCATCCCATATCCCCGAC +
Preference number: 4 (lower is better)
Translates to: YKRSYHSSGSTFYLGLGKTEMNS*ASHIPD
Trigger: GTCGGGGATATGGGATGCCCAGGAATTCATCTCGGT...TTTACCCAGGCCCAGGTAAAAGGTGCTGCCAGAGCTATGATAACTTCTCTTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR CCA 90 bp AGCAGAGAACCATGTGCCTTCAAAACTGATATCACAGAATGCAACTGGCTTCAGACCGAGATGAATTCCTaGGCATCCCATATCCCCGAC +
Preference number: 4 (lower is better)
Translates to: SREPCAFKTDITECNWLQTEMNS*ASHIPD
Trigger: GTCGGGGATATGGGATGCCCAGGAATTCATCTCGGT...CTGAAGCCAGTTGCATTCTGTGATATCAGTTTTGAAGGCACATGGTTCTCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000251943.8
ENST00000394780.8
ENST00000436609.5
ENST00000470971.5
ENST00000610588.4
ENST00000621367.4
ENST00000624161.3
ENST00000636363.1
CDS-3UTR CCA 90 bp AGTCTAGGCCTGAAAAGGCAGTTGAAGTCAGCGCTGCAGAATCTTGGCACTTCCCCTTTTACCTGGGCCTaGGTAAAAATCAACTTTAGG +
Preference number: 4 (lower is better)
Translates to: SLGLKRQLKSALQNLGTSPFTWA*VKINFR
Trigger: CCTAAAGTTGATTTTTACCCAGGCCCAGGTAAAAGG...GGAAGTGCCAAGATTCTGCAGCGCTGACTTCAACTGCCTTTTCAGGCCTAGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR CCA 90 bp CCCATATCCCCGACCTTGTCTCGGAGATGGATGCTGAGGATGAAAATGTTCATTGCAGCACCTTTTACCTaGGCCTGGGTAAAAATCAAC +
Preference number: 4 (lower is better)
Translates to: PISPTLSRRWMLRMKMFIAAPFT*AWVKIN
Trigger: GTTGATTTTTACCCAGGCCCAGGTAAAAGGTGCTGC...AATGAACATTTTCATCCTCAGCATCCATCTCCGAGACAAGGTCGGGGATATGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR CCA 90 bp AGCCCTCTGGTATATTTTCAGCATTGTAGCAGGCACCCCACTCTTCCATCCTATGCAGCACCTTTTACCTaGGCCTGGGTAAAAATCAAC +
Preference number: 4 (lower is better)
Translates to: SPLVYFQHCSRHPTLPSYAAPFT*AWVKIN
Trigger: GTTGATTTTTACCCAGGCCCAGGTAAAAGGTGCTGC...ATAGGATGGAAGAGTGGGGTGCCTGCTACAATGCTGAAAATATACCAGAGGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR CCA 90 bp AGCAGAGAACCATGTGCCTTCAAAACTGATATCACAGAATGCAACTGGCTTCAGGTGGCACATAGACCATaGAGTGCCAGTAGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: SREPCAFKTDITECNWLQVAHRP*SASSCG
Trigger: ACCACAGCTACTGGCACTCCATGGTCTATGTGCCAC...CTGAAGCCAGTTGCATTCTGTGATATCAGTTTTGAAGGCACATGGTTCTCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000251943.8
ENST00000394780.8
ENST00000436609.5
ENST00000470971.5
ENST00000610588.4
ENST00000621367.4
ENST00000624161.3
ENST00000636363.1
CDS-3UTR CCA 90 bp ATAGCATTCCAGGCAGGAACAGACATCACTTGGGTAACTGGTTTTAAGTTAGCCGCAGGAGTCAAAACCTaGCAAAGGTGGCTGCCCATA +
Preference number: 4 (lower is better)
Translates to: IAFQAGTDITWVTGFKLAAGVKT*QRWLPI
Trigger: TATGGGCAGCCACCTTTGCCAGGTTTTGACTCCTGC...GGCTAACTTAAAACCAGTTACCCAAGTGATGTCTGTTCCTGCCTGGAATGCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR CCA 90 bp CCTGAAAAGGCAGTTGAAGTCAGCGCTGCAGAATCTTGGCACTTCCCAGGAGCAAATACTTCATACTGCTaGATCTTACATACCCTGAGG +
Preference number: 4 (lower is better)
Translates to: PEKAVEVSAAESWHFPGANTSYC*ILHTLR
Trigger: CCTCAGGGTATGTAAGATCCAGCAGTATGAAGTATT...TGCTCCTGGGAAGTGCCAAGATTCTGCAGCGCTGACTTCAACTGCCTTTTCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR TCA 90 bp TCTAGTAATTTCACTAAACTGCAATTAGGATTTGGACCCAATGCAAATGTGCACGGGTTCCTCAAGCCCTaGTCGCAAGGGCCGGATATG +
Preference number: 4 (lower is better)
Translates to: SSNFTKLQLGFGPNANVHGFLKP*SQGPDM
Trigger: CATATCCGGCCCTTGCGATCAGGGCTTGAGGAACCC...GTGCACATTTGCATTGGGTCCAAATCCTAATTGCAGTTTAGTGAAATTACTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371979.7
CDS-3UTR TCA 90 bp ACTGTGCAAAAGACACCAATTCAATACAGTGCAGTAAAACACTTACATACATCCGGGTTCCTCAAGCCCTaGTCGCAAGGGCCGGATATG +
Preference number: 4 (lower is better)
Translates to: TVQKTPIQYSAVKHLHTSGFLKP*SQGPDM
Trigger: CATATCCGGCCCTTGCGATCAGGGCTTGAGGAACCC...GGATGTATGTAAGTGTTTTACTGCACTGTATTGAATTGGTGTCTTTTGCACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000251943.8
ENST00000394780.8
ENST00000610588.4
ENST00000621367.4
ENST00000624161.3
CDS-3UTR TCA 90 bp AGCATATGGGATAAATCTAAAGCAGAGAACCATGTGCCTTCAAAACTGATATCAGGGTTCCTCAAGCCCTaGTCGCAAGGGCCGGATATG +
Preference number: 4 (lower is better)
Translates to: SIWDKSKAENHVPSKLISGFLKP*SQGPDM
Trigger: CATATCCGGCCCTTGCGATCAGGGCTTGAGGAACCC...TGATATCAGTTTTGAAGGCACATGGTTCTCTGCTTTAGATTTATCCCATATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000251943.8
ENST00000394780.8
ENST00000610588.4
ENST00000621367.4
ENST00000624161.3
CDS-3UTR TCA 90 bp GCTAACTGTGCAAAAGACACCAATTCAATACAGTGCAGTAAAACACTTACATACGGGTTCCTCAAGCCCTaGTCGCAAGGGCCGGATATG +
Preference number: 4 (lower is better)
Translates to: ANCAKDTNSIQCSKTLTYGFLKP*SQGPDM
Trigger: CATATCCGGCCCTTGCGATCAGGGCTTGAGGAACCC...GTATGTAAGTGTTTTACTGCACTGTATTGAATTGGTGTCTTTTGCACAGTTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000251943.8
ENST00000394780.8
ENST00000610588.4
ENST00000621367.4
ENST00000624161.3
CDS-3UTR TCA 90 bp ACAGGAAAACAGCTGAATACAATGAAGTATGCTCAATATGGGGCTAGTTGTACACCGACACACACGCAATaGGGTCGTCAAAGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: TGKQLNTMKYAQYGASCTPTHTQ*GRQSWW
Trigger: CCACCAGCTTTGACGACCTCATTGCGTGTGTGTCGG...TGTACAACTAGCCCCATATTGAGCATACTTCATTGTATTCAGCTGTTTTCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000251943.8
ENST00000394780.8
ENST00000470971.5
ENST00000610588.4
ENST00000621367.4
ENST00000623144.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR TCA 90 bp ATGCAGAAAATTTTTCTGGCTGGCCAGGAGGATAACATTTCAGTGTTGATAAGTCCGACACACACGCAATaGGGTCGTCAAAGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: MQKIFLAGQEDNISVLISPTHTQ*GRQSWW
Trigger: CCACCAGCTTTGACGACCTCATTGCGTGTGTGTCGG...ACTTATCAACACTGAAATGTTATCCTCCTGGCCAGCCAGAAAAATTTTCTGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000468657.5
ENST00000473389.5
ENST00000482374.5
ENST00000489033.5
ENST00000492038.5
CDS-3UTR TCA 90 bp TGTGCCTTCAAAACTGATATCACAGAATGCAACTGGCTTCAGATAATTCTCAAGCCGACACACACGCAATaGGGTCGTCAAAGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: CAFKTDITECNWLQIILKPTHTQ*GRQSWW
Trigger: CCACCAGCTTTGACGACCTCATTGCGTGTGTGTCGG...CTTGAGAATTATCTGAAGCCAGTTGCATTCTGTGATATCAGTTTTGAAGGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000251943.8
ENST00000394780.8
ENST00000470971.5
ENST00000610588.4
ENST00000621367.4
ENST00000624161.3
ENST00000636363.1
CDS-3UTR TCA 90 bp AACTTTTCGTTTATAACCACTACGAGTGGCTTTCCTTTTTCCAGAGTCTCCAAACCGACACACACGCAATaGGGTCGTCAAAGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: NFSFITTTSGFPFSRVSKPTHTQ*GRQSWW
Trigger: CCACCAGCTTTGACGACCTCATTGCGTGTGTGTCGG...TTTGGAGACTCTGGAAAAAGGAAAGCCACTCGTAGTGGTTATAAACGAAAAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000468657.5
ENST00000470971.5
ENST00000482374.5
ENST00000489033.5
ENST00000492038.5
ENST00000495283.5
ENST00000622997.3
ENST00000623144.3
ENST00000624161.3
CDS-3UTR TCA 90 bp GAATTTCGTACAATACAGCCTGACAAACAGCTGCACTTGACTGAAATTGTTTTGCCGACACACACGCAATaGGGTCGTCAAAGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: EFRTIQPDKQLHLTEIVLPTHTQ*GRQSWW
Trigger: CCACCAGCTTTGACGACCTCATTGCGTGTGTGTCGG...CAAAACAATTTCAGTCAAGTGCAGCTGTTTGTCAGGCTGTATTGTACGAAATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR TCA 90 bp AAAGGGAAGTCAGAGGCGTTACTGCACACAATTGACAACAACGGCTTAAACCTCCTTCCTGCACCTGCGTaGCTAATAACAAGATCTGCT +
Preference number: 4 (lower is better)
Translates to: KGKSEALLHTIDNNGLNLLPAPA*LITRSA
Trigger: AGCAGATCTTGTTATTAGTCACGCAGGTGCAGGAAG...GAGGTTTAAGCCGTTGTTGTCAATTGTGTGCAGTAACGCCTCTGACTTCCCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371979.7
CDS-3UTR TCA 90 bp TCCTTGGGATCTCCCAACCGTTCCAGGTATTTCTCAAAAGATCCCTCCACATATCTTCCTGCACCTGCGTaGCTAATAACAAGATCTGCT +
Preference number: 4 (lower is better)
Translates to: SLGSPNRSRYFSKDPSTYLPAPA*LITRSA
Trigger: AGCAGATCTTGTTATTAGTCACGCAGGTGCAGGAAG...ATATGTGGAGGGATCTTTTGAGAAATACCTGGAACGGTTGGGAGATCCCAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487141.5
CDS-3UTR TCA 90 bp AGGTACAATAGAAGAGATGACCCTCTTTGTGTAGCTGCTTTGCCAGTTCCAGCTCTTCCTGCACCTGCGTaGCTAATAACAAGATCTGCT +
Preference number: 4 (lower is better)
Translates to: RYNRRDDPLCVAALPVPALPAPA*LITRSA
Trigger: AGCAGATCTTGTTATTAGTCACGCAGGTGCAGGAAG...AGCTGGAACTGGCAAAGCAGCTACACAAAGAGGGTCATCTCTTCTATTGTACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000468657.5
ENST00000470971.5
ENST00000471924.5
ENST00000482374.5
ENST00000492038.5
ENST00000495283.5
ENST00000622997.3
ENST00000623144.3
ENST00000624161.3
CDS-3UTR TCA 90 bp CCTGAGGTACATAATGAGAAGCTGGGGGAGATGGAGCAATACAGCCAATTGGCCACAGCTGCACTTGACTaGAATTGTTTTGAGTACACA +
Preference number: 4 (lower is better)
Translates to: PEVHNEKLGEMEQYSQLATAALD*NCFEYT
Trigger: TGTGTACTCAAAACAATTTCAGTCAAGTGCAGCTGT...GGCCAATTGGCTGTATTGCTCCATCTCCCCCAGCTTCTCATTATGTACCTCAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR TCA 90 bp TCTTCCTTTCCGACTGGGCATAGCATTCCAGGCAGGAACAGACATCACTTGGGTACAGCTGCACTTGACTaGAATTGTTTTGAGTACACA +
Preference number: 4 (lower is better)
Translates to: SSFPTGHSIPGRNRHHLGTAALD*NCFEYT
Trigger: TGTGTACTCAAAACAATTTCAGTCAAGTGCAGCTGT...ACCCAAGTGATGTCTGTTCCTGCCTGGAATGCTATGCCCAGTCGGAAAGGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR TCA 90 bp TTCCAGGCAGGAACAGACATCACTTGGGTAACTGGTTTTAAGTTAGCCAGTGGATCGTACAATACAGCCTaGCAAACAGCTGCACTTGAC +
Preference number: 4 (lower is better)
Translates to: FQAGTDITWVTGFKLASGSYNTA*QTAALD
Trigger: GTCAAGTGCAGCTGTTTGTCAGGCTGTATTGTACGA...TCCACTGGCTAACTTAAAACCAGTTACCCAAGTGATGTCTGTTCCTGCCTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR TCA 90 bp AGCAGAGAACCATGTGCCTTCAAAACTGATATCACAGAATGCAACTGGCTTCAGATTGCCAGCTGTCTGTaGGTAGTGCATTGGAGGATC +
Preference number: 4 (lower is better)
Translates to: SREPCAFKTDITECNWLQIASCL*VVHWRI
Trigger: GATCCTCCAATGCACTACTCACAGACAGCTGGCAAT...CTGAAGCCAGTTGCATTCTGTGATATCAGTTTTGAAGGCACATGGTTCTCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000251943.8
ENST00000394780.8
ENST00000436609.5
ENST00000470971.5
ENST00000610588.4
ENST00000621367.4
ENST00000624161.3
ENST00000636363.1
CDS-3UTR TCA 90 bp AGTCAAAACCTGGCAAAGGTGGCTGCCCATAGGGATCTGACATTACTGGATAATCAACTCATCTGGCGGTaGCTACGTCTAAATGAACGA +
Preference number: 4 (lower is better)
Translates to: SQNLAKVAAHRDLTLLDNQLIWR*LRLNER
Trigger: TCGTTCATTTAGACGTAGTCACCGCCAGATGAGTTG...ATTATCCAGTAATGTCAGATCCCTATGGGCAGCCACCTTTGCCAGGTTTTGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR TCA 90 bp CCCATATCCCCGACCTTGTCTCGGAGATGGATGCTGAGGATGAAAATGTTCATTTCCAACACAGTATCCTaGAGTAGCAGGAACCATTGT +
Preference number: 4 (lower is better)
Translates to: PISPTLSRRWMLRMKMFISNTVS*SSRNHC
Trigger: ACAATGGTTCCTGCTACTTCAGGATACTGTGTTGGA...AATGAACATTTTCATCCTCAGCATCCATCTCCGAGACAAGGTCGGGGATATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR TCA 90 bp CTATTTCCGGGACATAACCCCCAGGCATTTTCTGGTAACCTCTTCCTTTCCGACCATGACTTTCTGTCCTaGAGAGACAAGTTTGCTGTA +
Preference number: 4 (lower is better)
Translates to: LFPGHNPQAFSGNLFLSDHDFLS*RDKFAV
Trigger: TACAGCAAACTTGTCTCTTCAGGACAGAAAGTCATG...GTCGGAAAGGAAGAGGTTACCAGAAAATGCCTGGGGGTTATGTCCCGGAAATAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR TCA 90 bp AGCCCTCTGGTATATTTTCAGCATTGTAGCAGGCACCCCACTCTTCCATCCTATAAAAGTATCATTTGCTaGTGCTTCCGCCTGTATGCC +
Preference number: 4 (lower is better)
Translates to: SPLVYFQHCSRHPTLPSYKSIIC*CFRLYA
Trigger: GGCATACAGGCGGAAGCATCAGCAAATGATACTTTT...ATAGGATGGAAGAGTGGGGTGCCTGCTACAATGCTGAAAATATACCAGAGGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR TCA 90 bp GGCAAGAGGCATCCTTGGCAGTCAGCTTTCGAAACAGCCCTAAGCTGCCTAAATATGTGCCTTCAAAACTaGTATCACAGAATGCAACTG +
Preference number: 4 (lower is better)
Translates to: GKRHPWQSAFETALSCLNMCLQN*YHRMQL
Trigger: CAGTTGCATTCTGTGATATCAGTTTTGAAGGCACAT...ATTTAGGCAGCTTAGGGCTGTTTCGAAAGCTGACTGCCAAGGATGCCTCTTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624161.3
CDS-3UTR TCA 90 bp ATAGCATTCCAGGCAGGAACAGACATCACTTGGGTAACTGGTTTTAAGTTAGCCAGAGAGGCACCAGCATaGGGAATAGCAGAATGGCAT +
Preference number: 4 (lower is better)
Translates to: IAFQAGTDITWVTGFKLAREAPA*GIAEWH
Trigger: ATGCCATTCTGCTATTCCTCATGCTGGTGCCTCTCT...GGCTAACTTAAAACCAGTTACCCAAGTGATGTCTGTTCCTGCCTGGAATGCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470971.5
ENST00000623148.3
CDS-3UTR TCA 90 bp TCCTTGGGATCTCCCAACCGTTCCAGGTATTTCTCAAAAGATCCCTCCACATATTTGGAGTCTGATGTTTaGAGGCAGGAAGTATCCAGC +
Preference number: 4 (lower is better)
Translates to: SLGSPNRSRYFSKDPSTYLESDV*RQEVSS
Trigger: GCTGGATACTTCCTGCCTTCAAACATCAGACTCCAA...ATATGTGGAGGGATCTTTTGAGAAATACCTGGAACGGTTGGGAGATCCCAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487141.5
CDS-3UTR TCA 90 bp CTTTCCTTGGGATCTCCCAACCGTTCCAGGTATTTCTCAAAAGATCCCTCCACAGAAGAACTTGGAGTCTaGTGTTTGAAGGCAGGAAGT +
Preference number: 4 (lower is better)
Translates to: LSLGSPNRSRYFSKDPSTEELGV*CLKAGS
Trigger: ACTTCCTGCCTTCAAACATCAGACTCCAAGTTCTTC...TGTGGAGGGATCTTTTGAGAAATACCTGGAACGGTTGGGAGATCCCAAGGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487141.5
CDS-3UTR TCA 90 bp ATGAATTCCTGGGCATCCCATATCCCCGACCTTGTCTCGGAGATGGATGCTGAGGAAAGCGATAAAGAATaGAATCCCGAAGACTCAAAA +
Preference number: 4 (lower is better)
Translates to: MNSWASHIPDLVSEMDAEESDKE*NPEDSK
Trigger: TTTTGAGTCTTCGGGATTTCATTCTTTATCGCTTTC...CTCAGCATCCATCTCCGAGACAAGGTCGGGGATATGGGATGCCCAGGAATTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636363.1
CDS-3UTR GCA 90 bp CAAGTTGGCTTCCTCCTGCTACCCAGAGTATTTCTTTGTCACCACCTTCTACCAACAGCTTCCTGCACCTaGGTGACTAATAACAAGATC +
Preference number: 4 (lower is better)
Translates to: QVGFLLLPRVFLCHHLLPTASCT*VTNNKI
Trigger: GATCTTGTTATTAGTCACGCAGGTGCAGGAAGCTGT...TGGTAGAAGGTGGTGACAAAGAAATACTCTGGGTAGCAGGAGGAAGCCAACTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371979.7
ENST00000471924.5
CDS-3UTR GCA 90 bp AGCAGAGAACCATGTGCCTTCAAAACTGATATCACAGAATGCAACTGGCTTCAGACAAGGGCTTGCTTATaGAGGTATCCGGAAAGCAGC +
Preference number: 4 (lower is better)
Translates to: SREPCAFKTDITECNWLQTRACL*RYPESS
Trigger: GCTGCTTTCCGGATACCTGCATAAGCAAGCCCTTGT...CTGAAGCCAGTTGCATTCTGTGATATCAGTTTTGAAGGCACATGGTTCTCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000251943.8
ENST00000394780.8
ENST00000436609.5
ENST00000610588.4
ENST00000621367.4
ENST00000624161.3
ENST00000636363.1
CDS-3UTR GCA 90 bp CTGAGGTACATAATGAGAAGCTGGGGGAGATGGAGCAATACAGCCAATTGGCCCGAAACAGCCCTAAGCTaGCTAAATATTCATCCATTG +
Preference number: 4 (lower is better)
Translates to: LRYIMRSWGRWSNTANWPETALS*LNIHPL
Trigger: CAATGGATGAATATTTAGGCAGCTTAGGGCTGTTTC...GGGCCAATTGGCTGTATTGCTCCATCTCCCCCAGCTTCTCATTATGTACCTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR GCA 90 bp TCTAGGCCTGAAAAGGCAGTTGAAGTCAGCGCTGCAGAATCTTGGCACTTCCCAGAAACAGCCCTAAGCTaGCTAAATATTCATCCATTG +
Preference number: 4 (lower is better)
Translates to: SRPEKAVEVSAAESWHFPETALS*LNIHPL
Trigger: CAATGGATGAATATTTAGGCAGCTTAGGGCTGTTTC...TGGGAAGTGCCAAGATTCTGCAGCGCTGACTTCAACTGCCTTTTCAGGCCTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000486353.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR GCA 90 bp CCTGAGGTACATAATGAGAAGCTGGGGGAGATGGAGCAATACAGCCAATTGGCCGAAACAGCCCTAAGCTaGCTAAATATTCATCCATTG +
Preference number: 4 (lower is better)
Translates to: PEVHNEKLGEMEQYSQLAETALS*LNIHPL
Trigger: CAATGGATGAATATTTAGGCAGCTTAGGGCTGTTTC...GGCCAATTGGCTGTATTGCTCCATCTCCCCCAGCTTCTCATTATGTACCTCAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR GCA 90 bp AGCAGAGAACCATGTGCCTTCAAAACTGATATCACAGAATGCAACTGGCTTCAGGGGCCCGGCATGTTGTaGCTGTTTATAAACCGAGAT +
Preference number: 4 (lower is better)
Translates to: SREPCAFKTDITECNWLQGPGML*LFINRD
Trigger: ATCTCGGTTTATAAACAGGCACAACATGCCGGGCCC...CTGAAGCCAGTTGCATTCTGTGATATCAGTTTTGAAGGCACATGGTTCTCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000251943.8
ENST00000394780.8
ENST00000436609.5
ENST00000470971.5
ENST00000610588.4
ENST00000621367.4
ENST00000624161.3
ENST00000636363.1
CDS-3UTR GCA 90 bp CTATTTCCGGGACATAACCCCCAGGCATTTTCTGGTAACCTCTTCCTTTCCGACCTGAAGAGACAAGTTTaGTGTAGATGCAGTTGTGCT +
Preference number: 4 (lower is better)
Translates to: LFPGHNPQAFSGNLFLSDLKRQV*CRCSCA
Trigger: AGCACAACTGCATCTACAGCAAACTTGTCTCTTCAG...GTCGGAAAGGAAGAGGTTACCAGAAAATGCCTGGGGGTTATGTCCCGGAAATAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR GCA 90 bp ACAACTGCTCCGAAATGGCCCGAAAGAGGCAAGAGGCATCCTTGGCAGTCAGCTACTGATATCACAGAATaGAACTGGCTTCAGATAATT +
Preference number: 4 (lower is better)
Translates to: TTAPKWPERGKRHPWQSATDITE*NWLQII
Trigger: AATTATCTGAAGCCAGTTGCATTCTGTGATATCAGT...AGCTGACTGCCAAGGATGCCTCTTGCCTCTTTCGGGCCATTTCGGAGCAGTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624161.3
CDS-3UTR GCA 90 bp CATCAACTTTTCGTTTATAACCACTACGAGTGGCTTTCCTTTTTCCAGAGTCTCAGGAATCCTTGTACTTaGAGACTGTCGGGCGCCGAC +
Preference number: 4 (lower is better)
Translates to: HQLFVYNHYEWLSFFQSLRNPCT*RLSGAD
Trigger: GTCGGCGCCCGACAGTCTGCAAGTACAAGGATTCCT...GAGACTCTGGAAAAAGGAAAGCCACTCGTAGTGGTTATAAACGAAAAGTTGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000470971.5
ENST00000492038.5
ENST00000624161.3
CDS-3UTR CCA 90 bp ACTGATATCACAGAATGCAACTGGCTTCAGATAATTCTCAAGAAACGTGAAGAGCAAACACGCACTTCATaGCGCGGGTTCCTCAAGCCC +
Preference number: 4 (lower is better)
Translates to: TDITECNWLQIILKKREEQTRTS*RGFLKP
Trigger: GGGCTTGAGGAACCCGCGCCATGAAGTGCGTGTTTG...CTCTTCACGTTTCTTGAGAATTATCTGAAGCCAGTTGCATTCTGTGATATCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000251943.8
ENST00000394780.8
ENST00000610588.4
ENST00000621367.4
ENST00000624161.3
ENST00000636363.1
CDS-3UTR CCA 90 bp ATGCAGAAAATTTTTCTGGCTGGCCAGGAGGATAACATTTCAGTGTTGATAAGTCAAACACGCACTTCATaGCGCGGGTTCCTCAAGCCC +
Preference number: 4 (lower is better)
Translates to: MQKIFLAGQEDNISVLISQTRTS*RGFLKP
Trigger: GGGCTTGAGGAACCCGCGCCATGAAGTGCGTGTTTG...ACTTATCAACACTGAAATGTTATCCTCCTGGCCAGCCAGAAAAATTTTCTGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000468657.5
ENST00000473389.5
ENST00000482374.5
ENST00000492038.5
CDS-3UTR CCA 90 bp AAAAGGCAGTTGAAGTCAGCGCTGCAGAATCTTGGCACTTCCCAGGAGCAGAAGTATAACCACTACGAGTaGCTTTCCTTTTTCCAGAGT +
Preference number: 4 (lower is better)
Translates to: KRQLKSALQNLGTSQEQKYNHYE*LSFFQS
Trigger: ACTCTGGAAAAAGGAAAGCCACTCGTAGTGGTTATA...CTTCTGCTCCTGGGAAGTGCCAAGATTCTGCAGCGCTGACTTCAACTGCCTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000471924.5
ENST00000486353.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR CCA 90 bp TTCGAAACAGCCCTAAGCTGCCTAAATATTCATCCATTGATGCCTCATTCAAAGCAGGAGCAGAAGCAATaGACTTGGCTTGCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: FETALSCLNIHPLMPHSKQEQKQ*TWLAQD
Trigger: GTCCTGGGCAAGCCAAGTCCATTGCTTCTGCTCCTG...CTTTGAATGAGGCATCAATGGATGAATATTTAGGCAGCTTAGGGCTGTTTCGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000486353.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000624881.3
CDS-3UTR CCA 90 bp ATAGCATTCCAGGCAGGAACAGACATCACTTGGGTAACTGGTTTTAAGTTAGCCGGCAAGAGGCATCCTTaGCAGTCAGCTTTCGAAACA +
Preference number: 4 (lower is better)
Translates to: IAFQAGTDITWVTGFKLAGKRHP*QSAFET
Trigger: TGTTTCGAAAGCTGACTGCCAAGGATGCCTCTTGCC...GGCTAACTTAAAACCAGTTACCCAAGTGATGTCTGTTCCTGCCTGGAATGCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR CCA 90 bp AGCTGCCTAAATATTCATCCATTGATGCCTCATTCAAAGACTTCTGGCTGCAGTACAACTGCTCCGAAATaGCCCGAAAGAGGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: SCLNIHPLMPHSKTSGCSTTAPK*PERGKR
Trigger: CCTCTTGCCTCTTTCGGGCCATTTCGGAGCAGTTGT...ACTGCAGCCAGAAGTCTTTGAATGAGGCATCAATGGATGAATATTTAGGCAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000486353.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000624881.3
CDS-3UTR CCA 90 bp AGCAGAGAACCATGTGCCTTCAAAACTGATATCACAGAATGCAACTGGCTTCAGGCTCTTATTTCCAGCTaGCCAGCACTTTCCTTGGGA +
Preference number: 4 (lower is better)
Translates to: SREPCAFKTDITECNWLQALISS*PALSLG
Trigger: TCCCAAGGAAAGTGCTGGCCAGCTGGAAATAAGAGC...CTGAAGCCAGTTGCATTCTGTGATATCAGTTTTGAAGGCACATGGTTCTCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000251943.8
ENST00000394780.8
ENST00000436609.5
ENST00000470971.5
ENST00000610588.4
ENST00000621367.4
ENST00000624161.3
CDS-3UTR CCA 90 bp TATAAGAGAAGTTATCATAGCTCTGGCAGCACCTTTTACCTGGGCCTGGGTAAAGCTCTTATTTCCAGCTaGCCAGCACTTTCCTTGGGA +
Preference number: 4 (lower is better)
Translates to: YKRSYHSSGSTFYLGLGKALISS*PALSLG
Trigger: TCCCAAGGAAAGTGCTGGCCAGCTGGAAATAAGAGC...TTTACCCAGGCCCAGGTAAAAGGTGCTGCCAGAGCTATGATAACTTCTCTTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR CCA 90 bp GCCAGCACTTTCCTTGGGATCTCCCAACCGTTCCAGGTATTTCTCAAAAGATCCATCTGTGACATAAGTTaGAGGTTTTCCAGGAAAGCG +
Preference number: 4 (lower is better)
Translates to: ASTFLGISQPFQVFLKRSICDIS*RFSRKA
Trigger: CGCTTTCCTGGAAAACCTCCAACTTATGTCACAGAT...GGATCTTTTGAGAAATACCTGGAACGGTTGGGAGATCCCAAGGAAAGTGCTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000487141.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR CCA 90 bp CCCATATCCCCGACCTTGTCTCGGAGATGGATGCTGAGGATGAAAATGTTCATTACCTTGTCTCGGAGATaGATGCTGAGGATGAAAATG +
Preference number: 4 (lower is better)
Translates to: PISPTLSRRWMLRMKMFITLSRR*MLRMKM
Trigger: CATTTTCATCCTCAGCATCCATCTCCGAGACAAGGT...AATGAACATTTTCATCCTCAGCATCCATCTCCGAGACAAGGTCGGGGATATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR CCA 90 bp TCTCGGAGATGGATGCTGAGGATGAAAATGTTCATTAGACATAACATTGCCAGCACCGAGATGAATTCCTaGGCATCCCATATCCCCGAC +
Preference number: 4 (lower is better)
Translates to: SRRWMLRMKMFIRHNIASTEMNS*ASHIPD
Trigger: GTCGGGGATATGGGATGCCCAGGAATTCATCTCGGT...GCTGGCAATGTTATGTCTAATGAACATTTTCATCCTCAGCATCCATCTCCGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR CCA 90 bp AAAGCAGAGAACCATGTGCCTTCAAAACTGATATCACAGAATGCAACTGGCTTCTTTCTTCCAAGCCCCTaGGCATCTGTCCATTCCCTG +
Preference number: 4 (lower is better)
Translates to: KAENHVPSKLISQNATGFFLPSP*ASVHSL
Trigger: CAGGGAATGGACAGATGCCCAGGGGCTTGGAAGAAA...GAAGCCAGTTGCATTCTGTGATATCAGTTTTGAAGGCACATGGTTCTCTGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000251943.8
ENST00000394780.8
ENST00000436609.5
ENST00000470971.5
ENST00000610588.4
ENST00000621367.4
ENST00000624161.3
ENST00000636363.1
CDS-3UTR CCA 90 bp TCCTTTATTGTAGCCCTCTGGTATATTTTCAGCATTGTAGCAGGCACCCCACTCCAAAACTTTTGTATCTaGCCTGCCGTGTGTAGGTGG +
Preference number: 4 (lower is better)
Translates to: SFIVALWYIFSIVAGTPLQNFCI*PAVCRW
Trigger: CCACCTACACACGGCAGGCCAGATACAAAAGTTTTG...GAGTGGGGTGCCTGCTACAATGCTGAAAATATACCAGAGGGCTACAATAAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR CCA 90 bp ATGAATTCCTGGGCATCCCATATCCCCGACCTTGTCTCGGAGATGGATGCTGAGTGGCTCAGTATAGACTaGATAATTCTCTACATGAAG +
Preference number: 4 (lower is better)
Translates to: MNSWASHIPDLVSEMDAEWLSID*IILYMK
Trigger: CTTCATGTAGAGAATTATCCAGTCTATACTGAGCCA...CTCAGCATCCATCTCCGAGACAAGGTCGGGGATATGGGATGCCCAGGAATTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR CCA 90 bp CTATTTCCGGGACATAACCCCCAGGCATTTTCTGGTAACCTCTTCCTTTCCGACTTGATCTACCAGAGGTaGCTCAGTATAGACTGGATA +
Preference number: 4 (lower is better)
Translates to: LFPGHNPQAFSGNLFLSDLIYQR*LSIDWI
Trigger: TATCCAGTCTATACTGAGCCACCTCTGGTAGATCAA...GTCGGAAAGGAAGAGGTTACCAGAAAATGCCTGGGGGTTATGTCCCGGAAATAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR CCA 90 bp TCTAAAGCAGAGAACCATGTGCCTTCAAAACTGATATCACAGAATGCAACTGGCGCAGGAGTCAAAACCTaGCAAAGGTGGCTGCCCATA +
Preference number: 4 (lower is better)
Translates to: SKAENHVPSKLISQNATGAGVKT*QRWLPI
Trigger: TATGGGCAGCCACCTTTGCCAGGTTTTGACTCCTGC...GCCAGTTGCATTCTGTGATATCAGTTTTGAAGGCACATGGTTCTCTGCTTTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000251943.8
ENST00000394780.8
ENST00000436609.5
ENST00000470971.5
ENST00000610588.4
ENST00000621367.4
ENST00000624161.3
ENST00000636363.1
CDS-3UTR CCA 90 bp CAGCACTTTCCTTGGGATCTCCCAACCGTTCCAGGTATTTCTCAAAAGATCCCTAGCAATACAGCCAATTaGCCCAGGATTTATAGCACC +
Preference number: 4 (lower is better)
Translates to: QHFPWDLPTVPGISQKIPSNTAN*PRIYST
Trigger: GGTGCTATAAATCCTGGGCCAATTGGCTGTATTGCT...AGGGATCTTTTGAGAAATACCTGGAACGGTTGGGAGATCCCAAGGAAAGTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR CCA 90 bp GCAGAGAACCATGTGCCTTCAAAACTGATATCACAGAATGCAACTGGCTTCAGAAGAAGCTGGGGGAGATaGAGCAATACAGCCAATTGG +
Preference number: 4 (lower is better)
Translates to: AENHVPSKLISQNATGFRRSWGR*SNTANW
Trigger: CCAATTGGCTGTATTGCTCCATCTCCCCCAGCTTCT...TCTGAAGCCAGTTGCATTCTGTGATATCAGTTTTGAAGGCACATGGTTCTCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000251943.8
ENST00000394780.8
ENST00000436609.5
ENST00000470971.5
ENST00000610588.4
ENST00000621367.4
ENST00000623310.1
ENST00000624161.3
ENST00000636363.1
CDS-3UTR CCA 90 bp AAACAACTGCTCCGAAATGGCCCGAAAGAGGCAAGAGGCATCCTTGGCAGTCAGATCACAGAATGCAACTaGCTTCAGATAATTCTCAAG +
Preference number: 4 (lower is better)
Translates to: KQLLRNGPKEARGILGSQITECN*LQIILK
Trigger: CTTGAGAATTATCTGAAGCCAGTTGCATTCTGTGAT...CTGACTGCCAAGGATGCCTCTTGCCTCTTTCGGGCCATTTCGGAGCAGTTGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624161.3
CDS-3UTR CCA 90 bp CAGGAAGCGTGCTGCAGGTACAATAGAAGAGATGACCCTCTTTGTGTAGCTGCTTGCAGAAAATTTTTCTaGCTGGCCAGGAGGATAACA +
Preference number: 4 (lower is better)
Translates to: QEACCRYNRRDDPLCVAACRKFF*LARRIT
Trigger: TGTTATCCTCCTGGCCAGCCAGAAAAATTTTCTGCA...AGCAGCTACACAAAGAGGGTCATCTCTTCTATTGTACCTGCAGCACGCTTCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000468657.5
ENST00000482374.5
ENST00000489033.5
CDS-3UTR CCA 90 bp ATGCAGAAAATTTTTCTGGCTGGCCAGGAGGATAACATTTCAGTGTTGATAAGTGCCCAGGAAGCGTGCTaGCCCTTTGGCAAGCTTCTA +
Preference number: 4 (lower is better)
Translates to: MQKIFLAGQEDNISVLISAQEAC*PFGKLL
Trigger: TAGAAGCTTGCCAAAGGGCCAGCACGCTTCCTGGGC...ACTTATCAACACTGAAATGTTATCCTCCTGGCCAGCCAGAAAAATTTTCTGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000473389.5
ENST00000492038.5
CDS-3UTR TCA 90 bp GTATTAAACAATAGCATATGGGATAAATCTAAAGCAGAGAACCATGTGCCTTCAGGGTTCCTCAAGCCCTaGTCGCAAGGGCCGGATATG +
Preference number: 4 (lower is better)
Translates to: VLNNSIWDKSKAENHVPSGFLKP*SQGPDM
Trigger: CATATCCGGCCCTTGCGATCAGGGCTTGAGGAACCC...TGAAGGCACATGGTTCTCTGCTTTAGATTTATCCCATATGCTATTGTTTAATAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000251943.8
ENST00000394780.8
ENST00000610588.4
ENST00000621367.4
ENST00000624161.3
CDS-3UTR TCA 90 bp AGCAGAGAACCATGTGCCTTCAAAACTGATATCACAGAATGCAACTGGCTTCAGCTTCCTGCACCTGCGTaGCTAATAACAAGATCTGCT +
Preference number: 4 (lower is better)
Translates to: SREPCAFKTDITECNWLQLPAPA*LITRSA
Trigger: AGCAGATCTTGTTATTAGTCACGCAGGTGCAGGAAG...CTGAAGCCAGTTGCATTCTGTGATATCAGTTTTGAAGGCACATGGTTCTCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000251943.8
ENST00000394780.8
ENST00000436609.5
ENST00000470971.5
ENST00000621367.4
ENST00000624161.3
ENST00000636363.1
CDS-3UTR TCA 90 bp CGACTCAGTACTGAAGGGTTCAGGTACCACCGTTCCTCTACCAATTTGCAGGATATTTTCCCTCATATATaGGACACAAGCCTTCCTGAT +
Preference number: 4 (lower is better)
Translates to: RLSTEGFRYHRSSTNLQDIFPHI*DTSLPD
Trigger: ATCAGGAAGGCTTGTGTCTCATATATGAGGGAAAAT...ATCCTGCAAATTGGTAGAGGAACGGTGGTACCTGAACCCTTCAGTACTGAGTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623144.3
ENST00000623148.3
CDS-3UTR TCA 90 bp CTATTTCCGGGACATAACCCCCAGGCATTTTCTGGTAACCTCTTCCTTTCCGACATTTTCCCTCATATATaGGACACAAGCCTTCCTGAT +
Preference number: 4 (lower is better)
Translates to: LFPGHNPQAFSGNLFLSDIFPHI*DTSLPD
Trigger: ATCAGGAAGGCTTGTGTCTCATATATGAGGGAAAAT...GTCGGAAAGGAAGAGGTTACCAGAAAATGCCTGGGGGTTATGTCCCGGAAATAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR TCA 90 bp CTATTTCCGGGACATAACCCCCAGGCATTTTCTGGTAACCTCTTCCTTTCCGACCATAGCCATTATCTGTaGCATAAGTTGGAGGTTTTC +
Preference number: 4 (lower is better)
Translates to: LFPGHNPQAFSGNLFLSDHSHYL*HKLEVF
Trigger: GAAAACCTCCAACTTATGTCACAGATAATGGCTATG...GTCGGAAAGGAAGAGGTTACCAGAAAATGCCTGGGGGTTATGTCCCGGAAATAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR TCA 90 bp GCCAGCACTTTCCTTGGGATCTCCCAACCGTTCCAGGTATTTCTCAAAAGATCCCATAGCCATTATCTGTaGCATAAGTTGGAGGTTTTC +
Preference number: 4 (lower is better)
Translates to: ASTFLGISQPFQVFLKRSHSHYL*HKLEVF
Trigger: GAAAACCTCCAACTTATGTCACAGATAATGGCTATG...GGATCTTTTGAGAAATACCTGGAACGGTTGGGAGATCCCAAGGAAAGTGCTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000487141.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR TCA 90 bp CGACTCAGTACTGAAGGGTTCAGGTACCACCGTTCCTCTACCAATTTGCAGGATCATAGCCATTATCTGTaGCATAAGTTGGAGGTTTTC +
Preference number: 4 (lower is better)
Translates to: RLSTEGFRYHRSSTNLQDHSHYL*HKLEVF
Trigger: GAAAACCTCCAACTTATGTCACAGATAATGGCTATG...ATCCTGCAAATTGGTAGAGGAACGGTGGTACCTGAACCCTTCAGTACTGAGTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623144.3
ENST00000623148.3
CDS-3UTR TCA 90 bp CTATTTCCGGGACATAACCCCCAGGCATTTTCTGGTAACCTCTTCCTTTCCGACCTTTATGTCCATCTCTaGTATAACTATTTCCGGGAC +
Preference number: 4 (lower is better)
Translates to: LFPGHNPQAFSGNLFLSDLYVHL*YNYFRD
Trigger: GTCCCGGAAATAGTTATATCAGAGATGGACATAAAG...GTCGGAAAGGAAGAGGTTACCAGAAAATGCCTGGGGGTTATGTCCCGGAAATAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR TCA 90 bp CAAATGGCTGACAGGAAAACAGCTGAATACAATGAAGTATGCTCAATATGGGGCATTGCCAGCTGTCTGTaGGTAGTGCATTGGAGGATC +
Preference number: 4 (lower is better)
Translates to: QMADRKTAEYNEVCSIWGIASCL*VVHWRI
Trigger: GATCCTCCAATGCACTACTCACAGACAGCTGGCAAT...GCCCCATATTGAGCATACTTCATTGTATTCAGCTGTTTTCCTGTCAGCCATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000251943.8
ENST00000394780.8
ENST00000436609.5
ENST00000470971.5
ENST00000610588.4
ENST00000621367.4
ENST00000623144.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR TCA 90 bp AGCAGAGAACCATGTGCCTTCAAAACTGATATCACAGAATGCAACTGGCTTCAGCAACTCATCTGGCGGTaGCTACGTCTAAATGAACGA +
Preference number: 4 (lower is better)
Translates to: SREPCAFKTDITECNWLQQLIWR*LRLNER
Trigger: TCGTTCATTTAGACGTAGTCACCGCCAGATGAGTTG...CTGAAGCCAGTTGCATTCTGTGATATCAGTTTTGAAGGCACATGGTTCTCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000251943.8
ENST00000394780.8
ENST00000436609.5
ENST00000470971.5
ENST00000610588.4
ENST00000621367.4
ENST00000624161.3
ENST00000636363.1
CDS-3UTR TCA 90 bp GCATTCCAGGCAGGAACAGACATCACTTGGGTAACTGGTTTTAAGTTAGCCAGTTCCAACACAGTATCCTaGAGTAGCAGGAACCATTGT +
Preference number: 4 (lower is better)
Translates to: AFQAGTDITWVTGFKLASSNTVS*SSRNHC
Trigger: ACAATGGTTCCTGCTACTTCAGGATACTGTGTTGGA...ACTGGCTAACTTAAAACCAGTTACCCAAGTGATGTCTGTTCCTGCCTGGAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR TCA 90 bp GGAACAACATGCTTTTCCGCCAATTCTTCAATGAAGACTGTTACTGAATTGTTCCAAAGTCTGTTTGCCTaGGCTATGTCCCCGCCTTCC +
Preference number: 4 (lower is better)
Translates to: GTTCFSANSSMKTVTELFQSLFA*AMSPPS
Trigger: GGAAGGCGGGGACATAGCTCAGGCAAACAGACTTTG...GAACAATTCAGTAACAGTCTTCATTGAAGAATTGGCGGAAAAGCATGTTGTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR TCA 90 bp CCCTGCAGGTACAATAGAAGAGATGACCCTCTTTGTGTAGCTGCTTTGCCAGTTTGTGCTATAAACACCTaGAGTTTCATAGTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: PCRYNRRDDPLCVAALPVCAINT*SFIVWL
Trigger: GAGCCAGACTATGAAACTTCAGGTGTTTATAGCACA...AACTGGCAAAGCAGCTACACAAAGAGGGTCATCTCTTCTATTGTACCTGCAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR TCA 90 bp CACCGTTCCTCTACCAATTTGCAGGATAAGTCGGTTGTAACCAAGGCTCTCGATCATGACTTTCTGTCCTaGAGAGACAAGTTTGCTGTA +
Preference number: 4 (lower is better)
Translates to: HRSSTNLQDKSVVTKALDHDFLS*RDKFAV
Trigger: TACAGCAAACTTGTCTCTTCAGGACAGAAAGTCATG...ATCGAGAGCCTTGGTTACAACCGACTTATCCTGCAAATTGGTAGAGGAACGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623144.3
ENST00000623148.3
CDS-3UTR TCA 90 bp AATACAATGAAGTATGCTCAATATGGGGCTAGTTGTACATCCATCTCAATTTCCGCATGGATAGGATGGTaGGGCAATCACTGGCCTGCC +
Preference number: 4 (lower is better)
Translates to: NTMKYAQYGASCTSISISAWIGW*GNHWPA
Trigger: GGCAGGCCAGTGATTGCCTCACCATCCTATCCATGC...GGAAATTGAGATGGATGTACAACTAGCCCCATATTGAGCATACTTCATTGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394780.8
ENST00000470971.5
ENST00000610588.4
ENST00000623148.3
CDS-3UTR GCA 90 bp TGCTGCAGGTACAATAGAAGAGATGACCCTCTTTGTGTAGCTGCTTTGCCAGTTACAGCTTCCTGCACCTaGGTGACTAATAACAAGATC +
Preference number: 4 (lower is better)
Translates to: CCRYNRRDDPLCVAALPVTASCT*VTNNKI
Trigger: GATCTTGTTATTAGTCACGCAGGTGCAGGAAGCTGT...AACTGGCAAAGCAGCTACACAAAGAGGGTCATCTCTTCTATTGTACCTGCAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468657.5
ENST00000482374.5
CDS-3UTR GCA 90 bp TTCCTTGGGATCTCCCAACCGTTCCAGGTATTTCTCAAAAGATCCCTCCACATAACAGCTTCCTGCACCTaGGTGACTAATAACAAGATC +
Preference number: 4 (lower is better)
Translates to: FLGISQPFQVFLKRSLHITASCT*VTNNKI
Trigger: GATCTTGTTATTAGTCACGCAGGTGCAGGAAGCTGT...TATGTGGAGGGATCTTTTGAGAAATACCTGGAACGGTTGGGAGATCCCAAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000470971.5
ENST00000487141.5
ENST00000495283.5
ENST00000623144.3
ENST00000624161.3
CDS-3UTR GCA 90 bp CAAATGGCTGACAGGAAAACAGCTGAATACAATGAAGTATGCTCAATATGGGGCACAAGGGCTTGCTTATaGAGGTATCCGGAAAGCAGC +
Preference number: 4 (lower is better)
Translates to: QMADRKTAEYNEVCSIWGTRACL*RYPESS
Trigger: GCTGCTTTCCGGATACCTGCATAAGCAAGCCCTTGT...GCCCCATATTGAGCATACTTCATTGTATTCAGCTGTTTTCCTGTCAGCCATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000251943.8
ENST00000394780.8
ENST00000436609.5
ENST00000610588.4
ENST00000621367.4
ENST00000623144.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR GCA 90 bp AGCAGAGAACCATGTGCCTTCAAAACTGATATCACAGAATGCAACTGGCTTCAGGCAGTAACAAGGGCTTaGTTATGCAGGTATCCGGAA +
Preference number: 4 (lower is better)
Translates to: SREPCAFKTDITECNWLQAVTRA*LCRYPE
Trigger: TTCCGGATACCTGCATAAGCAAGCCCTTGTTACTGC...CTGAAGCCAGTTGCATTCTGTGATATCAGTTTTGAAGGCACATGGTTCTCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000251943.8
ENST00000394780.8
ENST00000436609.5
ENST00000610588.4
ENST00000621367.4
ENST00000624161.3
ENST00000636363.1
CDS-3UTR GCA 90 bp CTGCTCCATGAGGGACAGATGAAGAATCAGCATTCGGAAAAGTATCATTTGCTGGCAGTAACAAGGGCTTaGTTATGCAGGTATCCGGAA +
Preference number: 4 (lower is better)
Translates to: LLHEGQMKNQHSEKYHLLAVTRA*LCRYPE
Trigger: TTCCGGATACCTGCATAAGCAAGCCCTTGTTACTGC...CAGCAAATGATACTTTTCCGAATGCTGATTCTTCATCTGTCCCTCATGGAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR GCA 90 bp CAAATGGCTGACAGGAAAACAGCTGAATACAATGAAGTATGCTCAATATGGGGCGGGCCCGGCATGTTGTaGCTGTTTATAAACCGAGAT +
Preference number: 4 (lower is better)
Translates to: QMADRKTAEYNEVCSIWGGPGML*LFINRD
Trigger: ATCTCGGTTTATAAACAGGCACAACATGCCGGGCCC...GCCCCATATTGAGCATACTTCATTGTATTCAGCTGTTTTCCTGTCAGCCATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000251943.8
ENST00000394780.8
ENST00000436609.5
ENST00000470971.5
ENST00000610588.4
ENST00000621367.4
ENST00000623144.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR GCA 90 bp AGCAGAGAACCATGTGCCTTCAAAACTGATATCACAGAATGCAACTGGCTTCAGAATTCAAAGTCTGTTTaGCTGAGCTATGTCCCCGCC +
Preference number: 4 (lower is better)
Translates to: SREPCAFKTDITECNWLQNSKSV*LSYVPA
Trigger: GGCGGGGACATAGCTCAGGCAAACAGACTTTGAATT...CTGAAGCCAGTTGCATTCTGTGATATCAGTTTTGAAGGCACATGGTTCTCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000251943.8
ENST00000394780.8
ENST00000436609.5
ENST00000470971.5
ENST00000610588.4
ENST00000621367.4
ENST00000624161.3
ENST00000636363.1
CDS-3UTR GCA 90 bp TGGGGTAAATCCATACTGGGACTCCTTATTCACACAACTCATCTGGCGGTGACTTTTCACTCTGGCCATTaGCCTCCTCTAAATTCAAAG +
Preference number: 4 (lower is better)
Translates to: WGKSILGLLIHTTHLAVTFHSGH*PPLNSK
Trigger: CTTTGAATTTAGAGGAGGGCAATGGCCAGAGTGAAA...AGTCACCGCCAGATGAGTTGTGTGAATAAGGAGTCCCAGTATGGATTTACCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR GCA 90 bp GTGGTGGTGGTTGTAAGTTTGAAGTCTCTCCCACATCAAGAGCAGGAGGAGGAGTTCATAGTCTGGCTCTaGACGATAAAGATATTCTTC +
Preference number: 4 (lower is better)
Translates to: VVVVVSLKSLPHQEQEEEFIVWL*TIKIFF
Trigger: GAAGAATATCTTTATCGTGCAGAGCCAGACTATGAA...CTCCTCCTCCTGCTCTTGATGTGGGAGAGACTTCAAACTTACAACCACCACCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470971.5
ENST00000623148.3
CDS-3UTR GCA 90 bp CTGAGGTACATAATGAGAAGCTGGGGGAGATGGAGCAATACAGCCAATTGGCCCTTCATAGTCTGGCTCTaGACGATAAAGATATTCTTC +
Preference number: 4 (lower is better)
Translates to: LRYIMRSWGRWSNTANWPFIVWL*TIKIFF
Trigger: GAAGAATATCTTTATCGTGCAGAGCCAGACTATGAA...GGGCCAATTGGCTGTATTGCTCCATCTCCCCCAGCTTCTCATTATGTACCTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR GCA 90 bp AAAAGCAGGGTGCAGGTAGGATGGGTAGCAGTAACAAGGGCTTGCTTATGCAGGTTCATAGTCTGGCTCTaGACGATAAAGATATTCTTC +
Preference number: 4 (lower is better)
Translates to: KSRVQVGWVAVTRACLCRFIVWL*TIKIFF
Trigger: GAAGAATATCTTTATCGTGCAGAGCCAGACTATGAA...CCTGCATAAGCAAGCCCTTGTTACTGCTACCCATCCTACCTGCACCCTGCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR GCA 90 bp TCCACAAAAGGGAAGTCAGAGGCGTTACTGCACACAATTGACAACAACGGCTTAAGTCAGAGGCGTTACTaGACACAATTGACAACAACG +
Preference number: 4 (lower is better)
Translates to: STKGKSEALLHTIDNNGLSQRRY*TQLTTT
Trigger: CGTTGTTGTCAATTGTGTGCAGTAACGCCTCTGACT...TAAGCCGTTGTTGTCAATTGTGTGCAGTAACGCCTCTGACTTCCCTTTTGTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371979.7
CDS-3UTR CCA 90 bp TCTAGTAATTTCACTAAACTGCAATTAGGATTTGGACCCAATGCAAATGTGCACCAAACACGCACTTCATaGCGCGGGTTCCTCAAGCCC +
Preference number: 4 (lower is better)
Translates to: SSNFTKLQLGFGPNANVHQTRTS*RGFLKP
Trigger: GGGCTTGAGGAACCCGCGCCATGAAGTGCGTGTTTG...GTGCACATTTGCATTGGGTCCAAATCCTAATTGCAGTTTAGTGAAATTACTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371979.7
ENST00000468657.5
ENST00000492038.5
CDS-3UTR CCA 90 bp CGACTCAGTACTGAAGGGTTCAGGTACCACCGTTCCTCTACCAATTTGCAGGATTATAACCACTACGAGTaGCTTTCCTTTTTCCAGAGT +
Preference number: 4 (lower is better)
Translates to: RLSTEGFRYHRSSTNLQDYNHYE*LSFFQS
Trigger: ACTCTGGAAAAAGGAAAGCCACTCGTAGTGGTTATA...ATCCTGCAAATTGGTAGAGGAACGGTGGTACCTGAACCCTTCAGTACTGAGTCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000468657.5
ENST00000471924.5
ENST00000489033.5
ENST00000622997.3
ENST00000623144.3
ENST00000623148.3
CDS-3UTR CCA 90 bp CAGGAAGCGTGCTGCAGGTACAATAGAAGAGATGACCCTCTTTGTGTAGCTGCTTATAACCACTACGAGTaGCTTTCCTTTTTCCAGAGT +
Preference number: 4 (lower is better)
Translates to: QEACCRYNRRDDPLCVAAYNHYE*LSFFQS
Trigger: ACTCTGGAAAAAGGAAAGCCACTCGTAGTGGTTATA...AGCAGCTACACAAAGAGGGTCATCTCTTCTATTGTACCTGCAGCACGCTTCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000468657.5
ENST00000482374.5
ENST00000489033.5
CDS-3UTR CCA 90 bp CAAATGGCTGACAGGAAAACAGCTGAATACAATGAAGTATGCTCAATATGGGGCCAGAAGCAATGGACTTaGCTTGCCCAGGACAAGTCA +
Preference number: 4 (lower is better)
Translates to: QMADRKTAEYNEVCSIWGQKQWT*LAQDKS
Trigger: TGACTTGTCCTGGGCAAGCCAAGTCCATTGCTTCTG...GCCCCATATTGAGCATACTTCATTGTATTCAGCTGTTTTCCTGTCAGCCATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000251943.8
ENST00000394780.8
ENST00000436609.5
ENST00000610588.4
ENST00000621367.4
ENST00000623144.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR CCA 90 bp GATCTGACATTACTGGATAATAGACTGCTCCATGAGGGACAGATGAAGAATCAGCAGAAGCAATGGACTTaGCTTGCCCAGGACAAGTCA +
Preference number: 4 (lower is better)
Translates to: DLTLLDNRLLHEGQMKNQQKQWT*LAQDKS
Trigger: TGACTTGTCCTGGGCAAGCCAAGTCCATTGCTTCTG...CTGATTCTTCATCTGTCCCTCATGGAGCAGTCTATTATCCAGTAATGTCAGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR CCA 90 bp CAAATGGCTGACAGGAAAACAGCTGAATACAATGAAGTATGCTCAATATGGGGCGGCAAGAGGCATCCTTaGCAGTCAGCTTTCGAAACA +
Preference number: 4 (lower is better)
Translates to: QMADRKTAEYNEVCSIWGGKRHP*QSAFET
Trigger: TGTTTCGAAAGCTGACTGCCAAGGATGCCTCTTGCC...GCCCCATATTGAGCATACTTCATTGTATTCAGCTGTTTTCCTGTCAGCCATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000251943.8
ENST00000394780.8
ENST00000436609.5
ENST00000610588.4
ENST00000621367.4
ENST00000623144.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR CCA 90 bp AGAGAACCATGTGCCTTCAAAACTGATATCACAGAATGCAACTGGCTTCAGATAACAACTGCTCCGAAATaGCCCGAAAGAGGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: REPCAFKTDITECNWLQITTAPK*PERGKR
Trigger: CCTCTTGCCTCTTTCGGGCCATTTCGGAGCAGTTGT...TATCTGAAGCCAGTTGCATTCTGTGATATCAGTTTTGAAGGCACATGGTTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000251943.8
ENST00000394780.8
ENST00000436609.5
ENST00000610588.4
ENST00000621367.4
ENST00000624161.3
ENST00000636363.1
CDS-3UTR CCA 90 bp TTAGCCAGTGGAACAACATGCTTTTCCGCCAATTCTTCAATGAAGACTGTTACTACAACTGCTCCGAAATaGCCCGAAAGAGGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: LASGTTCFSANSSMKTVTTTAPK*PERGKR
Trigger: CCTCTTGCCTCTTTCGGGCCATTTCGGAGCAGTTGT...AGTAACAGTCTTCATTGAAGAATTGGCGGAAAAGCATGTTGTTCCACTGGCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR CCA 90 bp TTCGAAACAGCCCTAAGCTGCCTAAATATTCATCCATTGATGCCTCATTCAAAGACAACTGCTCCGAAATaGCCCGAAAGAGGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: FETALSCLNIHPLMPHSKTTAPK*PERGKR
Trigger: CCTCTTGCCTCTTTCGGGCCATTTCGGAGCAGTTGT...CTTTGAATGAGGCATCAATGGATGAATATTTAGGCAGCTTAGGGCTGTTTCGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000486353.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000624881.3
CDS-3UTR CCA 90 bp TGTGCCTTCAAAACTGATATCACAGAATGCAACTGGCTTCAGATAATTCTCAAGGGCCAGCACTTTCCTTaGGATCTCCCAACCGTTCCA +
Preference number: 4 (lower is better)
Translates to: CAFKTDITECNWLQIILKGQHFP*DLPTVP
Trigger: TGGAACGGTTGGGAGATCCCAAGGAAAGTGCTGGCC...CTTGAGAATTATCTGAAGCCAGTTGCATTCTGTGATATCAGTTTTGAAGGCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000251943.8
ENST00000394780.8
ENST00000436609.5
ENST00000470971.5
ENST00000610588.4
ENST00000621367.4
ENST00000624161.3
CDS-3UTR CCA 90 bp GTCTGGCTCTGCACGATAAAGATATTCTTCATGATATCGCCCATTTTCACTCTGGCTCTTATTTCCAGCTaGCCAGCACTTTCCTTGGGA +
Preference number: 4 (lower is better)
Translates to: VWLCTIKIFFMISPIFTLALISS*PALSLG
Trigger: TCCCAAGGAAAGTGCTGGCCAGCTGGAAATAAGAGC...CAGAGTGAAAATGGGCGATATCATGAAGAATATCTTTATCGTGCAGAGCCAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR CCA 90 bp GAAAAGGCAGTTGAAGTCAGCGCTGCAGAATCTTGGCACTTCCCAGGAGCAGAAGGAACAGACATCACTTaGGTAACTGGTTTTAAGTTA +
Preference number: 4 (lower is better)
Translates to: EKAVEVSAAESWHFPGAEGTDIT*VTGFKL
Trigger: TAACTTAAAACCAGTTACCCAAGTGATGTCTGTTCC...TTCTGCTCCTGGGAAGTGCCAAGATTCTGCAGCGCTGACTTCAACTGCCTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR CCA 90 bp AGAGAACCATGTGCCTTCAAAACTGATATCACAGAATGCAACTGGCTTCAGATAACCGAGATGAATTCCTaGGCATCCCATATCCCCGAC +
Preference number: 4 (lower is better)
Translates to: REPCAFKTDITECNWLQITEMNS*ASHIPD
Trigger: GTCGGGGATATGGGATGCCCAGGAATTCATCTCGGT...TATCTGAAGCCAGTTGCATTCTGTGATATCAGTTTTGAAGGCACATGGTTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000251943.8
ENST00000394780.8
ENST00000436609.5
ENST00000470971.5
ENST00000610588.4
ENST00000621367.4
ENST00000624161.3
ENST00000636363.1
CDS-3UTR CCA 90 bp TTCGAAACAGCCCTAAGCTGCCTAAATATTCATCCATTGATGCCTCATTCAAAGACCGAGATGAATTCCTaGGCATCCCATATCCCCGAC +
Preference number: 4 (lower is better)
Translates to: FETALSCLNIHPLMPHSKTEMNS*ASHIPD
Trigger: GTCGGGGATATGGGATGCCCAGGAATTCATCTCGGT...CTTTGAATGAGGCATCAATGGATGAATATTTAGGCAGCTTAGGGCTGTTTCGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR CCA 90 bp CACTGTAGCATTGAGGAACGGTTTGATCTACCAGAGGTGGCTCAGTATAGACTGCCTTTTACCTGGGCCTaGGTAAAAATCAACTTTAGG +
Preference number: 4 (lower is better)
Translates to: HCSIEERFDLPEVAQYRLPFTWA*VKINFR
Trigger: CCTAAAGTTGATTTTTACCCAGGCCCAGGTAAAAGG...CAGTCTATACTGAGCCACCTCTGGTAGATCAAACCGTTCCTCAATGCTACAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR CCA 90 bp AGCAGAGAACCATGTGCCTTCAAAACTGATATCACAGAATGCAACTGGCTTCAGGCAGCACCTTTTACCTaGGCCTGGGTAAAAATCAAC +
Preference number: 4 (lower is better)
Translates to: SREPCAFKTDITECNWLQAAPFT*AWVKIN
Trigger: GTTGATTTTTACCCAGGCCCAGGTAAAAGGTGCTGC...CTGAAGCCAGTTGCATTCTGTGATATCAGTTTTGAAGGCACATGGTTCTCTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000251943.8
ENST00000394780.8
ENST00000436609.5
ENST00000470971.5
ENST00000610588.4
ENST00000621367.4
ENST00000624161.3
ENST00000636363.1
CDS-3UTR CCA 90 bp CACTGTAGCATTGAGGAACGGTTTGATCTACCAGAGGTGGCTCAGTATAGACTGGGGGTAAATCCATACTaGGACTCCTTATTCACACAA +
Preference number: 4 (lower is better)
Translates to: HCSIEERFDLPEVAQYRLGVNPY*DSLFTQ
Trigger: TTGTGTGAATAAGGAGTCCCAGTATGGATTTACCCC...CAGTCTATACTGAGCCACCTCTGGTAGATCAAACCGTTCCTCAATGCTACAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR CCA 90 bp ACTGAAGGGTTCAGGTACCACCGTTCCTCTACCAATTTGCAGGATAAGTCGGTTGGGGTAAATCCATACTaGGACTCCTTATTCACACAA +
Preference number: 4 (lower is better)
Translates to: TEGFRYHRSSTNLQDKSVGVNPY*DSLFTQ
Trigger: TTGTGTGAATAAGGAGTCCCAGTATGGATTTACCCC...AACCGACTTATCCTGCAAATTGGTAGAGGAACGGTGGTACCTGAACCCTTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623144.3
ENST00000623148.3
CDS-3UTR CCA 90 bp CTTTCCTTGGGATCTCCCAACCGTTCCAGGTATTTCTCAAAAGATCCCTCCACAGGGGTAAATCCATACTaGGACTCCTTATTCACACAA +
Preference number: 4 (lower is better)
Translates to: LSLGSPNRSRYFSKDPSTGVNPY*DSLFTQ
Trigger: TTGTGTGAATAAGGAGTCCCAGTATGGATTTACCCC...TGTGGAGGGATCTTTTGAGAAATACCTGGAACGGTTGGGAGATCCCAAGGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR CCA 90 bp GCAGAGAACCATGTGCCTTCAAAACTGATATCACAGAATGCAACTGGCTTCAGACATCTGTCCATTCCCTaGGGTAAATCCATACTGGGA +
Preference number: 4 (lower is better)
Translates to: AENHVPSKLISQNATGFRHLSIP*GKSILG
Trigger: TCCCAGTATGGATTTACCCCAGGGAATGGACAGATG...TCTGAAGCCAGTTGCATTCTGTGATATCAGTTTTGAAGGCACATGGTTCTCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000251943.8
ENST00000394780.8
ENST00000436609.5
ENST00000470971.5
ENST00000610588.4
ENST00000621367.4
ENST00000624161.3
ENST00000636363.1
CDS-3UTR CCA 90 bp ATAGCATTCCAGGCAGGAACAGACATCACTTGGGTAACTGGTTTTAAGTTAGCCCAAAACTTTTGTATCTaGCCTGCCGTGTGTAGGTGG +
Preference number: 4 (lower is better)
Translates to: IAFQAGTDITWVTGFKLAQNFCI*PAVCRW
Trigger: CCACCTACACACGGCAGGCCAGATACAAAAGTTTTG...GGCTAACTTAAAACCAGTTACCCAAGTGATGTCTGTTCCTGCCTGGAATGCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR CCA 90 bp GCTGCATCTGTGGCACATAGACCATGGAGTGCCAGTAGCTGTGGTAATAGCACTTGGCTCAGTATAGACTaGATAATTCTCTACATGAAG +
Preference number: 4 (lower is better)
Translates to: AASVAHRPWSASSCGNSTWLSID*IILYMK
Trigger: CTTCATGTAGAGAATTATCCAGTCTATACTGAGCCA...AGTGCTATTACCACAGCTACTGGCACTCCATGGTCTATGTGCCACAGATGCAGC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR CCA 90 bp CCGACTGGGCATAGCATTCCAGGCAGGAACAGACATCACTTGGGTAACTGGTTTTGGCTCAGTATAGACTaGATAATTCTCTACATGAAG +
Preference number: 4 (lower is better)
Translates to: PTGHSIPGRNRHHLGNWFWLSID*IILYMK
Trigger: CTTCATGTAGAGAATTATCCAGTCTATACTGAGCCA...AAACCAGTTACCCAAGTGATGTCTGTTCCTGCCTGGAATGCTATGCCCAGTCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR CCA 90 bp TCTAAAGCAGAGAACCATGTGCCTTCAAAACTGATATCACAGAATGCAACTGGCAGAAGCTGGGGGAGATaGAGCAATACAGCCAATTGG +
Preference number: 4 (lower is better)
Translates to: SKAENHVPSKLISQNATGRSWGR*SNTANW
Trigger: CCAATTGGCTGTATTGCTCCATCTCCCCCAGCTTCT...GCCAGTTGCATTCTGTGATATCAGTTTTGAAGGCACATGGTTCTCTGCTTTAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000251943.8
ENST00000394780.8
ENST00000436609.5
ENST00000470971.5
ENST00000610588.4
ENST00000621367.4
ENST00000623310.1
ENST00000624161.3
ENST00000636363.1
CDS-3UTR CCA 90 bp GTCTGGCTCTGCACGATAAAGATATTCTTCATGATATCGCCCATTTTCACTCTGAGAAGCTGGGGGAGATaGAGCAATACAGCCAATTGG +
Preference number: 4 (lower is better)
Translates to: VWLCTIKIFFMISPIFTLRSWGR*SNTANW
Trigger: CCAATTGGCTGTATTGCTCCATCTCCCCCAGCTTCT...CAGAGTGAAAATGGGCGATATCATGAAGAATATCTTTATCGTGCAGAGCCAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR CCA 90 bp CTATTTCCGGGACATAACCCCCAGGCATTTTCTGGTAACCTCTTCCTTTCCGACAATACTTCATACTGCTaGATCTTACATACCCTGAGG +
Preference number: 4 (lower is better)
Translates to: LFPGHNPQAFSGNLFLSDNTSYC*ILHTLR
Trigger: CCTCAGGGTATGTAAGATCCAGCAGTATGAAGTATT...GTCGGAAAGGAAGAGGTTACCAGAAAATGCCTGGGGGTTATGTCCCGGAAATAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000470971.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR CCA 90 bp CCTGAGGTACATAATGAGAAGCTGGGGGAGATGGAGCAATACAGCCAATTGGCCATCACAGAATGCAACTaGCTTCAGATAATTCTCAAG +
Preference number: 4 (lower is better)
Translates to: PEVHNEKLGEMEQYSQLAITECN*LQIILK
Trigger: CTTGAGAATTATCTGAAGCCAGTTGCATTCTGTGAT...GGCCAATTGGCTGTATTGCTCCATCTCCCCCAGCTTCTCATTATGTACCTCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000470971.5
ENST00000624161.3
ENST00000636363.1
CDS-3UTR TCA 90 bp ACTGCAATTAGGATTTGGACCCAATGCAAATGTGCACAACATAAAATTTCCTATCCGACACACACGCAATaGGGTCGTCAAAGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: TAIRIWTQCKCAQHKISYPTHTQ*GRQSWW
Trigger: CCACCAGCTTTGACGACCTCATTGCGTGTGTGTCGG...ATAGGAAATTTTATGTTGTGCACATTTGCATTGGGTCCAAATCCTAATTGCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371979.7
ENST00000468657.5
ENST00000489033.5
ENST00000492038.5
CDS-3UTR TCA 90 bp GCAAAAGACACCAATTCAATACAGTGCAGTAAAACACTTACATACATCCAGTATCCGACACACACGCAATaGGGTCGTCAAAGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: AKDTNSIQCSKTLTYIQYPTHTQ*GRQSWW
Trigger: CCACCAGCTTTGACGACCTCATTGCGTGTGTGTCGG...ATACTGGATGTATGTAAGTGTTTTACTGCACTGTATTGAATTGGTGTCTTTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000251943.8
ENST00000394780.8
ENST00000470971.5
ENST00000610588.4
ENST00000621367.4
ENST00000624161.3
CDS-3UTR TCA 90 bp AACTGTGCAAAAGACACCAATTCAATACAGTGCAGTAAAACACTTACATACATCCCGACACACACGCAATaGGGTCGTCAAAGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: NCAKDTNSIQCSKTLTYIPTHTQ*GRQSWW
Trigger: CCACCAGCTTTGACGACCTCATTGCGTGTGTGTCGG...GATGTATGTAAGTGTTTTACTGCACTGTATTGAATTGGTGTCTTTTGCACAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000251943.8
ENST00000394780.8
ENST00000470971.5
ENST00000610588.4
ENST00000621367.4
ENST00000624161.3
CDS-3UTR TCA 90 bp AAAACTGATATCACAGAATGCAACTGGCTTCAGATAATTCTCAAGAAACGTGAACCGACACACACGCAATaGGGTCGTCAAAGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: KTDITECNWLQIILKKREPTHTQ*GRQSWW
Trigger: CCACCAGCTTTGACGACCTCATTGCGTGTGTGTCGG...TTCACGTTTCTTGAGAATTATCTGAAGCCAGTTGCATTCTGTGATATCAGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000251943.8
ENST00000394780.8
ENST00000470971.5
ENST00000610588.4
ENST00000621367.4
ENST00000624161.3
ENST00000636363.1
CDS-3UTR TCA 90 bp CTGCTTTCTGAATGTCTTCTTTCAAGGAATCCTTGTACCTGTGGTAGAGTTGCGAGACACAAGCCTTCCTaGTTTCCAAATGATGGACCT +
Preference number: 4 (lower is better)
Translates to: LLSECLLSRNPCTCGRVARHKPS*FPNDGP
Trigger: AGGTCCATCATTTGGAAATCAGGAAGGCTTGTGTCT...CGCAACTCTACCACAGGTACAAGGATTCCTTGAAAGAAGACATTCAGAAAGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495283.5
CDS-3UTR TCA 90 bp AGCACTTTCCTTGGGATCTCCCAACCGTTCCAGGTATTTCTCAAAAGATCCCTCATTTTCCCTCATATATaGGACACAAGCCTTCCTGAT +
Preference number: 4 (lower is better)
Translates to: STFLGISQPFQVFLKRSLIFPHI*DTSLPD
Trigger: ATCAGGAAGGCTTGTGTCTCATATATGAGGGAAAAT...GAGGGATCTTTTGAGAAATACCTGGAACGGTTGGGAGATCCCAAGGAAAGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000624881.3
CDS-3UTR TCA 90 bp ACTTTCCTTGGGATCTCCCAACCGTTCCAGGTATTTCTCAAAAGATCCCTCCACACAGCTGCACTTGACTaGAATTGTTTTGAGTACACA +
Preference number: 4 (lower is better)
Translates to: TFLGISQPFQVFLKRSLHTAALD*NCFEYT
Trigger: TGTGTACTCAAAACAATTTCAGTCAAGTGCAGCTGT...GTGGAGGGATCTTTTGAGAAATACCTGGAACGGTTGGGAGATCCCAAGGAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR TCA 90 bp TCACCTCACTGTAGCATTGAGGAACGGTTTGATCTACCAGAGGTGGCTCAGTATACAGCTGCACTTGACTaGAATTGTTTTGAGTACACA +
Preference number: 4 (lower is better)
Translates to: SPHCSIEERFDLPEVAQYTAALD*NCFEYT
Trigger: TGTGTACTCAAAACAATTTCAGTCAAGTGCAGCTGT...ATACTGAGCCACCTCTGGTAGATCAAACCGTTCCTCAATGCTACAGTGAGGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR TCA 90 bp CTTTCCTTGGGATCTCCCAACCGTTCCAGGTATTTCTCAAAAGATCCCTCCACACCGCCAATTCTTCAATaGAGACTGTTACTGAATTGT +
Preference number: 4 (lower is better)
Translates to: LSLGSPNRSRYFSKDPSTPPILQ*RLLLNC
Trigger: ACAATTCAGTAACAGTCTTCATTGAAGAATTGGCGG...TGTGGAGGGATCTTTTGAGAAATACCTGGAACGGTTGGGAGATCCCAAGGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR TCA 90 bp GATTTCCAAATGATGGACCTGGCTGCAAAACAACTGCTCCGAAATGGCCCGAAATCCCTCGAATTTTCTTaGACATCTTCTTCTGTTGCT +
Preference number: 4 (lower is better)
Translates to: DFQMMDLAAKQLLRNGPKSLEFS*TSSSVA
Trigger: AGCAACAGAAGAAGATGTTCAAGAAAATTCGAGGGA...TTTCGGGCCATTTCGGAGCAGTTGTTTTGCAGCCAGGTCCATCATTTGGAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR TCA 90 bp TCCTCGCTTCCAGTTACAGCATTATTTCTGTTCTTCTTAGAACCACTTCGAAACATTGCCAGCTGTCTGTaGGTAGTGCATTGGAGGATC +
Preference number: 4 (lower is better)
Translates to: SSLPVTALFLFFLEPLRNIASCL*VVHWRI
Trigger: GATCCTCCAATGCACTACTCACAGACAGCTGGCAAT...GTTTCGAAGTGGTTCTAAGAAGAACAGAAATAATGCTGTAACTGGAAGCGAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR TCA 90 bp AAAGCAGAGAACCATGTGCCTTCAAAACTGATATCACAGAATGCAACTGGCTTCCAACTCATCTGGCGGTaGCTACGTCTAAATGAACGA +
Preference number: 4 (lower is better)
Translates to: KAENHVPSKLISQNATGFQLIWR*LRLNER
Trigger: TCGTTCATTTAGACGTAGTCACCGCCAGATGAGTTG...GAAGCCAGTTGCATTCTGTGATATCAGTTTTGAAGGCACATGGTTCTCTGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000251943.8
ENST00000394780.8
ENST00000436609.5
ENST00000470971.5
ENST00000610588.4
ENST00000621367.4
ENST00000624161.3
ENST00000636363.1
CDS-3UTR TCA 90 bp AGCAGAGAACCATGTGCCTTCAAAACTGATATCACAGAATGCAACTGGCTTCAGTCCAACACAGTATCCTaGAGTAGCAGGAACCATTGT +
Preference number: 4 (lower is better)
Translates to: SREPCAFKTDITECNWLQSNTVS*SSRNHC
Trigger: ACAATGGTTCCTGCTACTTCAGGATACTGTGTTGGA...CTGAAGCCAGTTGCATTCTGTGATATCAGTTTTGAAGGCACATGGTTCTCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000251943.8
ENST00000394780.8
ENST00000436609.5
ENST00000470971.5
ENST00000610588.4
ENST00000621367.4
ENST00000624161.3
ENST00000636363.1
CDS-3UTR TCA 90 bp GCAGAGAACCATGTGCCTTCAAAACTGATATCACAGAATGCAACTGGCTTCAGATCCAACACAGTATCCTaGAGTAGCAGGAACCATTGT +
Preference number: 4 (lower is better)
Translates to: AENHVPSKLISQNATGFRSNTVS*SSRNHC
Trigger: ACAATGGTTCCTGCTACTTCAGGATACTGTGTTGGA...TCTGAAGCCAGTTGCATTCTGTGATATCAGTTTTGAAGGCACATGGTTCTCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000251943.8
ENST00000394780.8
ENST00000436609.5
ENST00000470971.5
ENST00000610588.4
ENST00000621367.4
ENST00000624161.3
ENST00000636363.1
CDS-3UTR TCA 90 bp GATAAATCTAAAGCAGAGAACCATGTGCCTTCAAAACTGATATCACAGAATGCACAAAGTCTGTTTGCCTaGGCTATGTCCCCGCCTTCC +
Preference number: 4 (lower is better)
Translates to: DKSKAENHVPSKLISQNAQSLFA*AMSPPS
Trigger: GGAAGGCGGGGACATAGCTCAGGCAAACAGACTTTG...TGCATTCTGTGATATCAGTTTTGAAGGCACATGGTTCTCTGCTTTAGATTTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000251943.8
ENST00000394780.8
ENST00000436609.5
ENST00000470971.5
ENST00000610588.4
ENST00000621367.4
ENST00000624161.3
ENST00000636363.1
CDS-3UTR TCA 90 bp CCAGTATTAAACAATAGCATATGGGATAAATCTAAAGCAGAGAACCATGTGCCTCAAAGTCTGTTTGCCTaGGCTATGTCCCCGCCTTCC +
Preference number: 4 (lower is better)
Translates to: PVLNNSIWDKSKAENHVPQSLFA*AMSPPS
Trigger: GGAAGGCGGGGACATAGCTCAGGCAAACAGACTTTG...AGGCACATGGTTCTCTGCTTTAGATTTATCCCATATGCTATTGTTTAATACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000251943.8
ENST00000394780.8
ENST00000436609.5
ENST00000470971.5
ENST00000610588.4
ENST00000621367.4
ENST00000624161.3
ENST00000636363.1
CDS-3UTR TCA 90 bp CTTGGGATCTCCCAACCGTTCCAGGTATTTCTCAAAAGATCCCTCCACATAAGACATGACTTTCTGTCCTaGAGAGACAAGTTTGCTGTA +
Preference number: 4 (lower is better)
Translates to: LGISQPFQVFLKRSLHIRHDFLS*RDKFAV
Trigger: TACAGCAAACTTGTCTCTTCAGGACAGAAAGTCATG...TCTTATGTGGAGGGATCTTTTGAGAAATACCTGGAACGGTTGGGAGATCCCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR TCA 90 bp TCTAAAGCAGAGAACCATGTGCCTTCAAAACTGATATCACAGAATGCAACTGGCGAGGTAACTGTGTCCTaGGGAGACATAGAACATGAC +
Preference number: 4 (lower is better)
Translates to: SKAENHVPSKLISQNATGEVTVS*GDIEHD
Trigger: GTCATGTTCTATGTCTCCTCAGGACACAGTTACCTC...GCCAGTTGCATTCTGTGATATCAGTTTTGAAGGCACATGGTTCTCTGCTTTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000251943.8
ENST00000394780.8
ENST00000436609.5
ENST00000470971.5
ENST00000610588.4
ENST00000621367.4
ENST00000624161.3
ENST00000636363.1
CDS-3UTR TCA 90 bp CCAAGTTGGCTTCCTCCTGCTACCCAGAGTATTTCTTTGTCACCACCTTCTACCTCACATTACATAGGTTaGATTTGGGGGTTGCTTTTA +
Preference number: 4 (lower is better)
Translates to: PSWLPPATQSISLSPPSTSHYIG*IWGLLL
Trigger: TAAAAGCAACCCCCAAATTCAACCTATGTAATGTGA...GGTAGAAGGTGGTGACAAAGAAATACTCTGGGTAGCAGGAGGAAGCCAACTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371979.7
CDS-3UTR TCA 90 bp CAGGAAGCGTGCTGCAGGTACAATAGAAGAGATGACCCTCTTTGTGTAGCTGCTTCACATTACATAGGTTaGATTTGGGGGTTGCTTTTA +
Preference number: 4 (lower is better)
Translates to: QEACCRYNRRDDPLCVAASHYIG*IWGLLL
Trigger: TAAAAGCAACCCCCAAATTCAACCTATGTAATGTGA...AGCAGCTACACAAAGAGGGTCATCTCTTCTATTGTACCTGCAGCACGCTTCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000468657.5
ENST00000482374.5
ENST00000489033.5
CDS-3UTR TCA 90 bp CAAGTTGGCTTCCTCCTGCTACCCAGAGTATTTCTTTGTCACCACCTTCTACCATTCTCTCCCTGGATTTaGATAGGACCTTTCCTAAAA +
Preference number: 4 (lower is better)
Translates to: QVGFLLLPRVFLCHHLLPFSPWI*IGPFLK
Trigger: TTTTAGGAAAGGTCCTATTCAAATCCAGGGAGAGAA...TGGTAGAAGGTGGTGACAAAGAAATACTCTGGGTAGCAGGAGGAAGCCAACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371979.7
CDS-3UTR TCA 90 bp AAAGGGAAGTCAGAGGCGTTACTGCACACAATTGACAACAACGGCTTAAACCTCGTTACTGCACACAATTaGCAACAACGGCTTAAACCT +
Preference number: 4 (lower is better)
Translates to: KGKSEALLHTIDNNGLNLVTAHN*QQRLKP
Trigger: AGGTTTAAGCCGTTGTTGTCAATTGTGTGCAGTAAC...GAGGTTTAAGCCGTTGTTGTCAATTGTGTGCAGTAACGCCTCTGACTTCCCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371979.7
CDS-3UTR TCA 90 bp GCAAAAGACACCAATTCAATACAGTGCAGTAAAACACTTACATACATCCAGTATGCATGGATAGGATGGTaGGGCAATCACTGGCCTGCC +
Preference number: 4 (lower is better)
Translates to: AKDTNSIQCSKTLTYIQYAWIGW*GNHWPA
Trigger: GGCAGGCCAGTGATTGCCTCACCATCCTATCCATGC...ATACTGGATGTATGTAAGTGTTTTACTGCACTGTATTGAATTGGTGTCTTTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394780.8
ENST00000470971.5
ENST00000610588.4
CDS-3UTR TCA 90 bp CAGCACTTTCCTTGGGATCTCCCAACCGTTCCAGGTATTTCTCAAAAGATCCCTAAAACTTTTGTATCTTaGGGCAAATCACTGCCGCTT +
Preference number: 4 (lower is better)
Translates to: QHFPWDLPTVPGISQKIPKTFVS*GKSLPL
Trigger: AAGCGGCAGTGATTTGCCTCAAGATACAAAAGTTTT...AGGGATCTTTTGAGAAATACCTGGAACGGTTGGGAGATCCCAAGGAAAGTGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000470971.5
ENST00000623148.3
CDS-3UTR TCA 90 bp ATGATGGCTCATCTAATATATGCTGATTGTGCTGCTTACAGCCCAGTACCCCTCGCTAAAGCAGACAACTaGACTATGTCATCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: MMAHLIYADCAAYSPVPLAKADN*TMSSSE
Trigger: CTCTGAAGATGACATAGTTCAGTTGTCTGCTTTAGC...GAGGGGTACTGGGCTGTAAGCAGCACAATCAGCATATATTAGATGAGCCATCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474121.1
CDS-3UTR GCA 90 bp AGCAGAGAACCATGTGCCTTCAAAACTGATATCACAGAATGCAACTGGCTTCAGACAGCTTCCTGCACCTaGGTGACTAATAACAAGATC +
Preference number: 4 (lower is better)
Translates to: SREPCAFKTDITECNWLQTASCT*VTNNKI
Trigger: GATCTTGTTATTAGTCACGCAGGTGCAGGAAGCTGT...CTGAAGCCAGTTGCATTCTGTGATATCAGTTTTGAAGGCACATGGTTCTCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000251943.8
ENST00000394780.8
ENST00000436609.5
ENST00000470971.5
ENST00000621367.4
ENST00000624161.3
ENST00000636363.1
CDS-3UTR GCA 90 bp TTTTTCCAGAGTCTCCAAACAGCTTCCTGCACCTGCGTGACTAATAACAAGATCACAGCTTCCTGCACCTaGGTGACTAATAACAAGATC +
Preference number: 4 (lower is better)
Translates to: FFQSLQTASCTCVTNNKITASCT*VTNNKI
Trigger: GATCTTGTTATTAGTCACGCAGGTGCAGGAAGCTGT...GATCTTGTTATTAGTCACGCAGGTGCAGGAAGCTGTTTGGAGACTCTGGAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000468657.5
ENST00000471924.5
ENST00000482374.5
ENST00000495283.5
ENST00000622997.3
ENST00000623144.3
CDS-3UTR GCA 90 bp AAGCTGCCTAAATATTCATCCATTGATGCCTCATTCAAAGACTTCTGGCTGCAGGCAGTAACAAGGGCTTaGTTATGCAGGTATCCGGAA +
Preference number: 4 (lower is better)
Translates to: KLPKYSSIDASFKDFWLQAVTRA*LCRYPE
Trigger: TTCCGGATACCTGCATAAGCAAGCCCTTGTTACTGC...CTGCAGCCAGAAGTCTTTGAATGAGGCATCAATGGATGAATATTTAGGCAGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000486353.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000624881.3
CDS-3UTR GCA 90 bp AGATCTATAAGAGAAGTTATCATAGCTCTGGCAGCACCTTTTACCTGGGCCTGGTTTCACTCTGGCCATTaGCCTCCTCTAAATTCAAAG +
Preference number: 4 (lower is better)
Translates to: RSIREVIIALAAPFTWAWFHSGH*PPLNSK
Trigger: CTTTGAATTTAGAGGAGGGCAATGGCCAGAGTGAAA...CCAGGCCCAGGTAAAAGGTGCTGCCAGAGCTATGATAACTTCTCTTATAGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR GCA 90 bp ACTGAAGGGTTCAGGTACCACCGTTCCTCTACCAATTTGCAGGATAAGTCGGTTCAAGTTTGCTGTAGATaGAGTTGTGCTATAAACACC +
Preference number: 4 (lower is better)
Translates to: TEGFRYHRSSTNLQDKSVQVCCR*SCAINT
Trigger: GGTGTTTATAGCACAACTGCATCTACAGCAAACTTG...AACCGACTTATCCTGCAAATTGGTAGAGGAACGGTGGTACCTGAACCCTTCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623144.3
ENST00000623148.3
CDS-3UTR GCA 90 bp AGATCTATAAGAGAAGTTATCATAGCTCTGGCAGCACCTTTTACCTGGGCCTGGGGAAGCTGCAACTGCTaGAATATTTCCCATCATCTT +
Preference number: 4 (lower is better)
Translates to: RSIREVIIALAAPFTWAWGSCNC*NISHHL
Trigger: AAGATGATGGGAAATATTGCAGCAGTTGCAGCTTCC...CCAGGCCCAGGTAAAAGGTGCTGCCAGAGCTATGATAACTTCTCTTATAGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR GCA 90 bp ATTTTTCTGGCTGGCCAGGAGGATAACATTTCAGTGTTGATAAGTCCATTGACTGCCCAGGAAGCGTGCTaGAGGTACAATAGAAGAGAT +
Preference number: 4 (lower is better)
Translates to: IFLAGQEDNISVLISPLTAQEAC*RYNRRD
Trigger: ATCTCTTCTATTGTACCTGCAGCACGCTTCCTGGGC...AGTCAATGGACTTATCAACACTGAAATGTTATCCTCCTGGCCAGCCAGAAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000468657.5
ENST00000482374.5
ENST00000489033.5
CDS-3UTR GCA 90 bp AGCTGCCTAAATATTCATCCATTGATGCCTCATTCAAAGACTTCTGGCTGCAGTCTTGAGGCAAATCACTaGCGCTTGGATCACAGGAAT +
Preference number: 4 (lower is better)
Translates to: SCLNIHPLMPHSKTSGCSLEANH*RLDHRN
Trigger: ATTCCTGTGATCCAAGCGGCAGTGATTTGCCTCAAG...ACTGCAGCCAGAAGTCTTTGAATGAGGCATCAATGGATGAATATTTAGGCAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623148.3
CDS-3UTR CCA 90 bp CACTGTAGCATTGAGGAACGGTTTGATCTACCAGAGGTGGCTCAGTATAGACTGTATAACCACTACGAGTaGCTTTCCTTTTTCCAGAGT +
Preference number: 4 (lower is better)
Translates to: HCSIEERFDLPEVAQYRLYNHYE*LSFFQS
Trigger: ACTCTGGAAAAAGGAAAGCCACTCGTAGTGGTTATA...CAGTCTATACTGAGCCACCTCTGGTAGATCAAACCGTTCCTCAATGCTACAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR CCA 90 bp TTAGCCAGTGGAACAACATGCTTTTCCGCCAATTCTTCAATGAAGACTGTTACTCAGAAGCAATGGACTTaGCTTGCCCAGGACAAGTCA +
Preference number: 4 (lower is better)
Translates to: LASGTTCFSANSSMKTVTQKQWT*LAQDKS
Trigger: TGACTTGTCCTGGGCAAGCCAAGTCCATTGCTTCTG...AGTAACAGTCTTCATTGAAGAATTGGCGGAAAAGCATGTTGTTCCACTGGCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR CCA 90 bp ACTGTGCAAAAGACACCAATTCAATACAGTGCAGTAAAACACTTACATACATCCCAGGAGCAGAAGCAATaGACTTGGCTTGCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: TVQKTPIQYSAVKHLHTSQEQKQ*TWLAQD
Trigger: GTCCTGGGCAAGCCAAGTCCATTGCTTCTGCTCCTG...GGATGTATGTAAGTGTTTTACTGCACTGTATTGAATTGGTGTCTTTTGCACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000251943.8
ENST00000394780.8
ENST00000436609.5
ENST00000610588.4
ENST00000621367.4
ENST00000624161.3
CDS-3UTR CCA 90 bp GCTAACTGTGCAAAAGACACCAATTCAATACAGTGCAGTAAAACACTTACATACCAGGAGCAGAAGCAATaGACTTGGCTTGCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: ANCAKDTNSIQCSKTLTYQEQKQ*TWLAQD
Trigger: GTCCTGGGCAAGCCAAGTCCATTGCTTCTGCTCCTG...GTATGTAAGTGTTTTACTGCACTGTATTGAATTGGTGTCTTTTGCACAGTTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000251943.8
ENST00000394780.8
ENST00000436609.5
ENST00000610588.4
ENST00000621367.4
ENST00000624161.3
CDS-3UTR CCA 90 bp AGTTTCATAGTCTGGCTCTGCACGATAAAGATATTCTTCATGATATCGCCCATTACAACTGCTCCGAAATaGCCCGAAAGAGGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: SFIVWLCTIKIFFMISPITTAPK*PERGKR
Trigger: CCTCTTGCCTCTTTCGGGCCATTTCGGAGCAGTTGT...AATGGGCGATATCATGAAGAATATCTTTATCGTGCAGAGCCAGACTATGAAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR CCA 90 bp AACAATAGCATATGGGATAAATCTAAAGCAGAGAACCATGTGCCTTCAAAACTGGGCCAGCACTTTCCTTaGGATCTCCCAACCGTTCCA +
Preference number: 4 (lower is better)
Translates to: NNSIWDKSKAENHVPSKLGQHFP*DLPTVP
Trigger: TGGAACGGTTGGGAGATCCCAAGGAAAGTGCTGGCC...CAGTTTTGAAGGCACATGGTTCTCTGCTTTAGATTTATCCCATATGCTATTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000251943.8
ENST00000394780.8
ENST00000436609.5
ENST00000470971.5
ENST00000610588.4
ENST00000621367.4
ENST00000624161.3
CDS-3UTR CCA 90 bp CTGCTAACTGTGCAAAAGACACCAATTCAATACAGTGCAGTAAAACACTTACATGGCCAGCACTTTCCTTaGGATCTCCCAACCGTTCCA +
Preference number: 4 (lower is better)
Translates to: LLTVQKTPIQYSAVKHLHGQHFP*DLPTVP
Trigger: TGGAACGGTTGGGAGATCCCAAGGAAAGTGCTGGCC...ATGTAAGTGTTTTACTGCACTGTATTGAATTGGTGTCTTTTGCACAGTTAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000251943.8
ENST00000394780.8
ENST00000436609.5
ENST00000470971.5
ENST00000610588.4
ENST00000621367.4
ENST00000624161.3
CDS-3UTR CCA 90 bp CCAGTATTAAACAATAGCATATGGGATAAATCTAAAGCAGAGAACCATGTGCCTGGCCAGCACTTTCCTTaGGATCTCCCAACCGTTCCA +
Preference number: 4 (lower is better)
Translates to: PVLNNSIWDKSKAENHVPGQHFP*DLPTVP
Trigger: TGGAACGGTTGGGAGATCCCAAGGAAAGTGCTGGCC...AGGCACATGGTTCTCTGCTTTAGATTTATCCCATATGCTATTGTTTAATACTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000251943.8
ENST00000394780.8
ENST00000436609.5
ENST00000470971.5
ENST00000610588.4
ENST00000621367.4
ENST00000624161.3
CDS-3UTR CCA 90 bp GCCTTCAAAACTGATATCACAGAATGCAACTGGCTTCAGATAATTCTCAAGAAAGGCCAGCACTTTCCTTaGGATCTCCCAACCGTTCCA +
Preference number: 4 (lower is better)
Translates to: AFKTDITECNWLQIILKKGQHFP*DLPTVP
Trigger: TGGAACGGTTGGGAGATCCCAAGGAAAGTGCTGGCC...TTTCTTGAGAATTATCTGAAGCCAGTTGCATTCTGTGATATCAGTTTTGAAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000251943.8
ENST00000394780.8
ENST00000436609.5
ENST00000470971.5
ENST00000610588.4
ENST00000621367.4
ENST00000624161.3
CDS-3UTR CCA 90 bp TTAGCCAGTGGAACAACATGCTTTTCCGCCAATTCTTCAATGAAGACTGTTACTGCTCTTATTTCCAGCTaGCCAGCACTTTCCTTGGGA +
Preference number: 4 (lower is better)
Translates to: LASGTTCFSANSSMKTVTALISS*PALSLG
Trigger: TCCCAAGGAAAGTGCTGGCCAGCTGGAAATAAGAGC...AGTAACAGTCTTCATTGAAGAATTGGCGGAAAAGCATGTTGTTCCACTGGCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR CCA 90 bp AGCAGAGAACCATGTGCCTTCAAAACTGATATCACAGAATGCAACTGGCTTCAGACCTTGTCTCGGAGATaGATGCTGAGGATGAAAATG +
Preference number: 4 (lower is better)
Translates to: SREPCAFKTDITECNWLQTLSRR*MLRMKM
Trigger: CATTTTCATCCTCAGCATCCATCTCCGAGACAAGGT...CTGAAGCCAGTTGCATTCTGTGATATCAGTTTTGAAGGCACATGGTTCTCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000251943.8
ENST00000394780.8
ENST00000436609.5
ENST00000470971.5
ENST00000610588.4
ENST00000621367.4
ENST00000624161.3
ENST00000636363.1
CDS-3UTR CCA 90 bp GCAGAGAACCATGTGCCTTCAAAACTGATATCACAGAATGCAACTGGCTTCAGAACCTTGTCTCGGAGATaGATGCTGAGGATGAAAATG +
Preference number: 4 (lower is better)
Translates to: AENHVPSKLISQNATGFRTLSRR*MLRMKM
Trigger: CATTTTCATCCTCAGCATCCATCTCCGAGACAAGGT...TCTGAAGCCAGTTGCATTCTGTGATATCAGTTTTGAAGGCACATGGTTCTCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000251943.8
ENST00000394780.8
ENST00000436609.5
ENST00000470971.5
ENST00000610588.4
ENST00000621367.4
ENST00000624161.3
ENST00000636363.1
CDS-3UTR CCA 90 bp CTTGGGATCTCCCAACCGTTCCAGGTATTTCTCAAAAGATCCCTCCACATAAGACCTTTTACCTGGGCCTaGGTAAAAATCAACTTTAGG +
Preference number: 4 (lower is better)
Translates to: LGISQPFQVFLKRSLHIRPFTWA*VKINFR
Trigger: CCTAAAGTTGATTTTTACCCAGGCCCAGGTAAAAGG...TCTTATGTGGAGGGATCTTTTGAGAAATACCTGGAACGGTTGGGAGATCCCAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR CCA 90 bp CAAATGGCTGACAGGAAAACAGCTGAATACAATGAAGTATGCTCAATATGGGGCCATCTGTCCATTCCCTaGGGTAAATCCATACTGGGA +
Preference number: 4 (lower is better)
Translates to: QMADRKTAEYNEVCSIWGHLSIP*GKSILG
Trigger: TCCCAGTATGGATTTACCCCAGGGAATGGACAGATG...GCCCCATATTGAGCATACTTCATTGTATTCAGCTGTTTTCCTGTCAGCCATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000251943.8
ENST00000394780.8
ENST00000436609.5
ENST00000470971.5
ENST00000610588.4
ENST00000621367.4
ENST00000623144.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR CCA 90 bp AAAGCAGAGAACCATGTGCCTTCAAAACTGATATCACAGAATGCAACTGGCTTCCAAAACTTTTGTATCTaGCCTGCCGTGTGTAGGTGG +
Preference number: 4 (lower is better)
Translates to: KAENHVPSKLISQNATGFQNFCI*PAVCRW
Trigger: CCACCTACACACGGCAGGCCAGATACAAAAGTTTTG...GAAGCCAGTTGCATTCTGTGATATCAGTTTTGAAGGCACATGGTTCTCTGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000251943.8
ENST00000436609.5
ENST00000621367.4
ENST00000624161.3
ENST00000636363.1
CDS-3UTR CCA 90 bp GCCAGCACTTTCCTTGGGATCTCCCAACCGTTCCAGGTATTTCTCAAAAGATCCTGGCTCAGTATAGACTaGATAATTCTCTACATGAAG +
Preference number: 4 (lower is better)
Translates to: ASTFLGISQPFQVFLKRSWLSID*IILYMK
Trigger: CTTCATGTAGAGAATTATCCAGTCTATACTGAGCCA...GGATCTTTTGAGAAATACCTGGAACGGTTGGGAGATCCCAAGGAAAGTGCTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR CCA 90 bp AGCAGAGAACCATGTGCCTTCAAAACTGATATCACAGAATGCAACTGGCTTCAGAGCAATACAGCCAATTaGCCCAGGATTTATAGCACC +
Preference number: 4 (lower is better)
Translates to: SREPCAFKTDITECNWLQSNTAN*PRIYST
Trigger: GGTGCTATAAATCCTGGGCCAATTGGCTGTATTGCT...CTGAAGCCAGTTGCATTCTGTGATATCAGTTTTGAAGGCACATGGTTCTCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000251943.8
ENST00000394780.8
ENST00000436609.5
ENST00000470971.5
ENST00000610588.4
ENST00000621367.4
ENST00000623310.1
ENST00000624161.3
ENST00000636363.1
CDS-3UTR CCA 90 bp GCAGAGAACCATGTGCCTTCAAAACTGATATCACAGAATGCAACTGGCTTCAGAAGCAATACAGCCAATTaGCCCAGGATTTATAGCACC +
Preference number: 4 (lower is better)
Translates to: AENHVPSKLISQNATGFRSNTAN*PRIYST
Trigger: GGTGCTATAAATCCTGGGCCAATTGGCTGTATTGCT...TCTGAAGCCAGTTGCATTCTGTGATATCAGTTTTGAAGGCACATGGTTCTCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000251943.8
ENST00000394780.8
ENST00000436609.5
ENST00000470971.5
ENST00000610588.4
ENST00000621367.4
ENST00000623310.1
ENST00000624161.3
ENST00000636363.1
CDS-3UTR CCA 90 bp CTTTCCTTGGGATCTCCCAACCGTTCCAGGTATTTCTCAAAAGATCCCTCCACAAATACTTCATACTGCTaGATCTTACATACCCTGAGG +
Preference number: 4 (lower is better)
Translates to: LSLGSPNRSRYFSKDPSTNTSYC*ILHTLR
Trigger: CCTCAGGGTATGTAAGATCCAGCAGTATGAAGTATT...TGTGGAGGGATCTTTTGAGAAATACCTGGAACGGTTGGGAGATCCCAAGGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000470971.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR CCA 90 bp ATGCAGAAAATTTTTCTGGCTGGCCAGGAGGATAACATTTCAGTGTTGATAAGTAGCGTGCTGGCCCTTTaGCAAGCTTCTAGTGTCTCA +
Preference number: 4 (lower is better)
Translates to: MQKIFLAGQEDNISVLISSVLAL*QASSVS
Trigger: TGAGACACTAGAAGCTTGCCAAAGGGCCAGCACGCT...ACTTATCAACACTGAAATGTTATCCTCCTGGCCAGCCAGAAAAATTTTCTGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000473389.5
ENST00000492038.5
3UTR CAA 72 bp ACAGCCAATTGGCCCAGGATTTATAGCACCATGAATTaGAGAAGAACCACCATATGCTGTACCAACTGGATG +
Preference number: 4 (lower is better)
Translates to: TANWPRIYSTMN*RRTTICCTNWM
Trigger: CATCCAGTTGGTACAGCATATGGTGGTTCTTCTCAAATTCATGGTGCTATAAATCCTGGGCCAATTGGCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR TCA 90 bp ATTTTTCTGGCTGGCCAGGAGGATAACATTTCAGTGTTGATAAGTCCATTGACTCTTCCTGCACCTGCGTaGCTAATAACAAGATCTGCT +
Preference number: 4 (lower is better)
Translates to: IFLAGQEDNISVLISPLTLPAPA*LITRSA
Trigger: AGCAGATCTTGTTATTAGTCACGCAGGTGCAGGAAG...AGTCAATGGACTTATCAACACTGAAATGTTATCCTCCTGGCCAGCCAGAAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000468657.5
ENST00000473389.5
ENST00000482374.5
ENST00000492038.5
CDS-3UTR TCA 90 bp CAAATGGCTGACAGGAAAACAGCTGAATACAATGAAGTATGCTCAATATGGGGCAGACACAAGCCTTCCTaGTTTCCAAATGATGGACCT +
Preference number: 4 (lower is better)
Translates to: QMADRKTAEYNEVCSIWGRHKPS*FPNDGP
Trigger: AGGTCCATCATTTGGAAATCAGGAAGGCTTGTGTCT...GCCCCATATTGAGCATACTTCATTGTATTCAGCTGTTTTCCTGTCAGCCATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000251943.8
ENST00000394780.8
ENST00000436609.5
ENST00000610588.4
ENST00000621367.4
ENST00000623144.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR TCA 90 bp TATAGCACCATGAATTTGAGAAGAACCACCATATGCTGTACCAACTGGATGCCAAGACACAAGCCTTCCTaGTTTCCAAATGATGGACCT +
Preference number: 4 (lower is better)
Translates to: YSTMNLRRTTICCTNWMPRHKPS*FPNDGP
Trigger: AGGTCCATCATTTGGAAATCAGGAAGGCTTGTGTCT...TGGCATCCAGTTGGTACAGCATATGGTGGTTCTTCTCAAATTCATGGTGCTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR TCA 90 bp TTCCAGGCAGGAACAGACATCACTTGGGTAACTGGTTTTAAGTTAGCCAGTGGAATTTTCCCTCATATATaGGACACAAGCCTTCCTGAT +
Preference number: 4 (lower is better)
Translates to: FQAGTDITWVTGFKLASGIFPHI*DTSLPD
Trigger: ATCAGGAAGGCTTGTGTCTCATATATGAGGGAAAAT...TCCACTGGCTAACTTAAAACCAGTTACCCAAGTGATGTCTGTTCCTGCCTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR TCA 90 bp AGGTACAATAGAAGAGATGACCCTCTTTGTGTAGCTGCTTTGCCAGTTCCAGCTCATAGCCATTATCTGTaGCATAAGTTGGAGGTTTTC +
Preference number: 4 (lower is better)
Translates to: RYNRRDDPLCVAALPVPAHSHYL*HKLEVF
Trigger: GAAAACCTCCAACTTATGTCACAGATAATGGCTATG...AGCTGGAACTGGCAAAGCAGCTACACAAAGAGGGTCATCTCTTCTATTGTACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR TCA 90 bp AGAGAACCATGTGCCTTCAAAACTGATATCACAGAATGCAACTGGCTTCAGATATCGTACAATACAGCCTaGCAAACAGCTGCACTTGAC +
Preference number: 4 (lower is better)
Translates to: REPCAFKTDITECNWLQISYNTA*QTAALD
Trigger: GTCAAGTGCAGCTGTTTGTCAGGCTGTATTGTACGA...TATCTGAAGCCAGTTGCATTCTGTGATATCAGTTTTGAAGGCACATGGTTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000251943.8
ENST00000394780.8
ENST00000436609.5
ENST00000610588.4
ENST00000621367.4
ENST00000624161.3
ENST00000636363.1
CDS-3UTR TCA 90 bp AGCCCTCTGGTATATTTTCAGCATTGTAGCAGGCACCCCACTCTTCCATCCTATATAATATCTTCCTTCTaGTTCCAAGCAAACCTGACA +
Preference number: 4 (lower is better)
Translates to: SPLVYFQHCSRHPTLPSYIISSF*FQANLT
Trigger: TGTCAGGTTTGCTTGGAATCAGAAGGAAGATATTAT...ATAGGATGGAAGAGTGGGGTGCCTGCTACAATGCTGAAAATATACCAGAGGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR TCA 90 bp AGATCTATAAGAGAAGTTATCATAGCTCTGGCAGCACCTTTTACCTGGGCCTGGCCGCCAATTCTTCAATaGAGACTGTTACTGAATTGT +
Preference number: 4 (lower is better)
Translates to: RSIREVIIALAAPFTWAWPPILQ*RLLLNC
Trigger: ACAATTCAGTAACAGTCTTCATTGAAGAATTGGCGG...CCAGGCCCAGGTAAAAGGTGCTGCCAGAGCTATGATAACTTCTCTTATAGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR TCA 90 bp AGGTACAATAGAAGAGATGACCCTCTTTGTGTAGCTGCTTTGCCAGTTCCAGCTCTTTATGTCCATCTCTaGTATAACTATTTCCGGGAC +
Preference number: 4 (lower is better)
Translates to: RYNRRDDPLCVAALPVPALYVHL*YNYFRD
Trigger: GTCCCGGAAATAGTTATATCAGAGATGGACATAAAG...AGCTGGAACTGGCAAAGCAGCTACACAAAGAGGGTCATCTCTTCTATTGTACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR TCA 90 bp ACTGATATCACAGAATGCAACTGGCTTCAGATAATTCTCAAGAAACGTGAAGAGATTGCCAGCTGTCTGTaGGTAGTGCATTGGAGGATC +
Preference number: 4 (lower is better)
Translates to: TDITECNWLQIILKKREEIASCL*VVHWRI
Trigger: GATCCTCCAATGCACTACTCACAGACAGCTGGCAAT...CTCTTCACGTTTCTTGAGAATTATCTGAAGCCAGTTGCATTCTGTGATATCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000251943.8
ENST00000394780.8
ENST00000436609.5
ENST00000470971.5
ENST00000610588.4
ENST00000621367.4
ENST00000624161.3
ENST00000636363.1
CDS-3UTR TCA 90 bp ATCCTCGCTTCCAGTTACAGCATTATTTCTGTTCTTCTTAGAACCACTTCGAAAATTGCCAGCTGTCTGTaGGTAGTGCATTGGAGGATC +
Preference number: 4 (lower is better)
Translates to: ILASSYSIISVLLRTTSKIASCL*VVHWRI
Trigger: GATCCTCCAATGCACTACTCACAGACAGCTGGCAAT...TTTCGAAGTGGTTCTAAGAAGAACAGAAATAATGCTGTAACTGGAAGCGAGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR TCA 90 bp TCCTCGCTTCCAGTTACAGCATTATTTCTGTTCTTCTTAGAACCACTTCGAAACCAACTCATCTGGCGGTaGCTACGTCTAAATGAACGA +
Preference number: 4 (lower is better)
Translates to: SSLPVTALFLFFLEPLRNQLIWR*LRLNER
Trigger: TCGTTCATTTAGACGTAGTCACCGCCAGATGAGTTG...GTTTCGAAGTGGTTCTAAGAAGAACAGAAATAATGCTGTAACTGGAAGCGAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR TCA 90 bp AGAAAATGGCAGTGCAAGAATACTTCATACTGCTGGATCTTACATACCCTGAGGTCCAACACAGTATCCTaGAGTAGCAGGAACCATTGT +
Preference number: 4 (lower is better)
Translates to: RKWQCKNTSYCWILHTLRSNTVS*SSRNHC
Trigger: ACAATGGTTCCTGCTACTTCAGGATACTGTGTTGGA...CCTCAGGGTATGTAAGATCCAGCAGTATGAAGTATTCTTGCACTGCCATTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000470971.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR TCA 90 bp CTAACTGTGCAAAAGACACCAATTCAATACAGTGCAGTAAAACACTTACATACACAAAGTCTGTTTGCCTaGGCTATGTCCCCGCCTTCC +
Preference number: 4 (lower is better)
Translates to: LTVQKTPIQYSAVKHLHTQSLFA*AMSPPS
Trigger: GGAAGGCGGGGACATAGCTCAGGCAAACAGACTTTG...TGTATGTAAGTGTTTTACTGCACTGTATTGAATTGGTGTCTTTTGCACAGTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000251943.8
ENST00000394780.8
ENST00000436609.5
ENST00000470971.5
ENST00000610588.4
ENST00000621367.4
ENST00000624161.3
CDS-3UTR TCA 90 bp GCAGAGAACCATGTGCCTTCAAAACTGATATCACAGAATGCAACTGGCTTCAGAAGGAGACATAGAACATaGCTTTCTGTCCTGAAGAGA +
Preference number: 4 (lower is better)
Translates to: AENHVPSKLISQNATGFRRRHRT*LSVLKR
Trigger: TCTCTTCAGGACAGAAAGTCATGTTCTATGTCTCCT...TCTGAAGCCAGTTGCATTCTGTGATATCAGTTTTGAAGGCACATGGTTCTCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000251943.8
ENST00000394780.8
ENST00000436609.5
ENST00000470971.5
ENST00000610588.4
ENST00000621367.4
ENST00000624161.3
ENST00000636363.1
CDS-3UTR TCA 90 bp TACAATAGAAGAGATGACCCTCTTTGTGTAGCTGCTTTGCCAGTTCCAGCTGATAGGAGACATAGAACATaGCTTTCTGTCCTGAAGAGA +
Preference number: 4 (lower is better)
Translates to: YNRRDDPLCVAALPVPADRRHRT*LSVLKR
Trigger: TCTCTTCAGGACAGAAAGTCATGTTCTATGTCTCCT...ATCAGCTGGAACTGGCAAAGCAGCTACACAAAGAGGGTCATCTCTTCTATTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR TCA 90 bp AGAGAACCATGTGCCTTCAAAACTGATATCACAGAATGCAACTGGCTTCAGATAGAGGTAACTGTGTCCTaGGGAGACATAGAACATGAC +
Preference number: 4 (lower is better)
Translates to: REPCAFKTDITECNWLQIEVTVS*GDIEHD
Trigger: GTCATGTTCTATGTCTCCTCAGGACACAGTTACCTC...TATCTGAAGCCAGTTGCATTCTGTGATATCAGTTTTGAAGGCACATGGTTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000251943.8
ENST00000394780.8
ENST00000436609.5
ENST00000470971.5
ENST00000610588.4
ENST00000621367.4
ENST00000624161.3
ENST00000636363.1
CDS-3UTR TCA 90 bp TCTCGGAGATGGATGCTGAGGATGAAAATGTTCATTAGACATAACATTGCCAGCAAAAGTATCATTTGCTaGTGCTTCCGCCTGTATGCC +
Preference number: 4 (lower is better)
Translates to: SRRWMLRMKMFIRHNIASKSIIC*CFRLYA
Trigger: GGCATACAGGCGGAAGCATCAGCAAATGATACTTTT...GCTGGCAATGTTATGTCTAATGAACATTTTCATCCTCAGCATCCATCTCCGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR TCA 90 bp TCTAAAGCAGAGAACCATGTGCCTTCAAAACTGATATCACAGAATGCAACTGGCCTGCCCATAGGGATCTaGCATTACTGGATAATAGAC +
Preference number: 4 (lower is better)
Translates to: SKAENHVPSKLISQNATGLPIGI*HYWIID
Trigger: GTCTATTATCCAGTAATGTCAGATCCCTATGGGCAG...GCCAGTTGCATTCTGTGATATCAGTTTTGAAGGCACATGGTTCTCTGCTTTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000251943.8
ENST00000394780.8
ENST00000436609.5
ENST00000470971.5
ENST00000610588.4
ENST00000621367.4
ENST00000624161.3
ENST00000636363.1
CDS-3UTR TCA 90 bp AGAAAATGGCAGTGCAAGAATACTTCATACTGCTGGATCTTACATACCCTGAGGCTGCCCATAGGGATCTaGCATTACTGGATAATAGAC +
Preference number: 4 (lower is better)
Translates to: RKWQCKNTSYCWILHTLRLPIGI*HYWIID
Trigger: GTCTATTATCCAGTAATGTCAGATCCCTATGGGCAG...CCTCAGGGTATGTAAGATCCAGCAGTATGAAGTATTCTTGCACTGCCATTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000470971.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR TCA 90 bp AAGCTGCCTAAATATTCATCCATTGATGCCTCATTCAAAGACTTCTGGCTGCAGCTGCCCATAGGGATCTaGCATTACTGGATAATAGAC +
Preference number: 4 (lower is better)
Translates to: KLPKYSSIDASFKDFWLQLPIGI*HYWIID
Trigger: GTCTATTATCCAGTAATGTCAGATCCCTATGGGCAG...CTGCAGCCAGAAGTCTTTGAATGAGGCATCAATGGATGAATATTTAGGCAGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR TCA 90 bp TGTGCCTTCAAAACTGATATCACAGAATGCAACTGGCTTCAGATAATTCTCAAGAGAGAGGCACCAGCATaGGGAATAGCAGAATGGCAT +
Preference number: 4 (lower is better)
Translates to: CAFKTDITECNWLQIILKREAPA*GIAEWH
Trigger: ATGCCATTCTGCTATTCCTCATGCTGGTGCCTCTCT...CTTGAGAATTATCTGAAGCCAGTTGCATTCTGTGATATCAGTTTTGAAGGCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394780.8
ENST00000470971.5
ENST00000610588.4
CDS-3UTR GCA 90 bp AGAGAACCATGTGCCTTCAAAACTGATATCACAGAATGCAACTGGCTTCAGATAGCAGTAACAAGGGCTTaGTTATGCAGGTATCCGGAA +
Preference number: 4 (lower is better)
Translates to: REPCAFKTDITECNWLQIAVTRA*LCRYPE
Trigger: TTCCGGATACCTGCATAAGCAAGCCCTTGTTACTGC...TATCTGAAGCCAGTTGCATTCTGTGATATCAGTTTTGAAGGCACATGGTTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000251943.8
ENST00000394780.8
ENST00000436609.5
ENST00000610588.4
ENST00000621367.4
ENST00000624161.3
ENST00000636363.1
CDS-3UTR GCA 90 bp AGTTTCATAGTCTGGCTCTGCACGATAAAGATATTCTTCATGATATCGCCCATTGGGCCCGGCATGTTGTaGCTGTTTATAAACCGAGAT +
Preference number: 4 (lower is better)
Translates to: SFIVWLCTIKIFFMISPIGPGML*LFINRD
Trigger: ATCTCGGTTTATAAACAGGCACAACATGCCGGGCCC...AATGGGCGATATCATGAAGAATATCTTTATCGTGCAGAGCCAGACTATGAAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR GCA 90 bp TTAGCCAGTGGAACAACATGCTTTTCCGCCAATTCTTCAATGAAGACTGTTACTAATTCAAAGTCTGTTTaGCTGAGCTATGTCCCCGCC +
Preference number: 4 (lower is better)
Translates to: LASGTTCFSANSSMKTVTNSKSV*LSYVPA
Trigger: GGCGGGGACATAGCTCAGGCAAACAGACTTTGAATT...AGTAACAGTCTTCATTGAAGAATTGGCGGAAAAGCATGTTGTTCCACTGGCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR GCA 90 bp CCAAACATCAAATTCTACATTACGATAGATTTCTGGATCCAGGGCTTTGAGCACAATTCAAAGTCTGTTTaGCTGAGCTATGTCCCCGCC +
Preference number: 4 (lower is better)
Translates to: PNIKFYITIDFWIQGFEHNSKSV*LSYVPA
Trigger: GGCGGGGACATAGCTCAGGCAAACAGACTTTGAATT...GTGCTCAAAGCCCTGGATCCAGAAATCTATCGTAATGTAGAATTTGATGTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR GCA 90 bp TACAATAGAAGAGATGACCCTCTTTGTGTAGCTGCTTTGCCAGTTCCAGCTGATTTTCACTCTGGCCATTaGCCTCCTCTAAATTCAAAG +
Preference number: 4 (lower is better)
Translates to: YNRRDDPLCVAALPVPADFHSGH*PPLNSK
Trigger: CTTTGAATTTAGAGGAGGGCAATGGCCAGAGTGAAA...ATCAGCTGGAACTGGCAAAGCAGCTACACAAAGAGGGTCATCTCTTCTATTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR GCA 90 bp TATAAGAGAAGTTATCATAGCTCTGGCAGCACCTTTTACCTGGGCCTGGGTAAATTTCACTCTGGCCATTaGCCTCCTCTAAATTCAAAG +
Preference number: 4 (lower is better)
Translates to: YKRSYHSSGSTFYLGLGKFHSGH*PPLNSK
Trigger: CTTTGAATTTAGAGGAGGGCAATGGCCAGAGTGAAA...TTTACCCAGGCCCAGGTAAAAGGTGCTGCCAGAGCTATGATAACTTCTCTTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR GCA 90 bp AGGTACAATAGAAGAGATGACCCTCTTTGTGTAGCTGCTTTGCCAGTTCCAGCTCAAGTTTGCTGTAGATaGAGTTGTGCTATAAACACC +
Preference number: 4 (lower is better)
Translates to: RYNRRDDPLCVAALPVPAQVCCR*SCAINT
Trigger: GGTGTTTATAGCACAACTGCATCTACAGCAAACTTG...AGCTGGAACTGGCAAAGCAGCTACACAAAGAGGGTCATCTCTTCTATTGTACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR GCA 90 bp AGCAGAGAACCATGTGCCTTCAAAACTGATATCACAGAATGCAACTGGCTTCAGCTGAAGAGACAAGTTTaGTGTAGATGCAGTTGTGCT +
Preference number: 4 (lower is better)
Translates to: SREPCAFKTDITECNWLQLKRQV*CRCSCA
Trigger: AGCACAACTGCATCTACAGCAAACTTGTCTCTTCAG...CTGAAGCCAGTTGCATTCTGTGATATCAGTTTTGAAGGCACATGGTTCTCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000251943.8
ENST00000394780.8
ENST00000436609.5
ENST00000470971.5
ENST00000610588.4
ENST00000621367.4
ENST00000624161.3
ENST00000636363.1
CDS-3UTR GCA 90 bp TCTAAAGCAGAGAACCATGTGCCTTCAAAACTGATATCACAGAATGCAACTGGCAGAAGAACCACCATATaGTGTACCAACTGGATGCCA +
Preference number: 4 (lower is better)
Translates to: SKAENHVPSKLISQNATGRRTTI*CTNWMP
Trigger: TGGCATCCAGTTGGTACAGCATATGGTGGTTCTTCT...GCCAGTTGCATTCTGTGATATCAGTTTTGAAGGCACATGGTTCTCTGCTTTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000251943.8
ENST00000394780.8
ENST00000436609.5
ENST00000470971.5
ENST00000610588.4
ENST00000621367.4
ENST00000623310.1
ENST00000624161.3
ENST00000636363.1
CDS-3UTR GCA 90 bp CAAATGGCTGACAGGAAAACAGCTGAATACAATGAAGTATGCTCAATATGGGGCAGAAGAACCACCATATaGTGTACCAACTGGATGCCA +
Preference number: 4 (lower is better)
Translates to: QMADRKTAEYNEVCSIWGRRTTI*CTNWMP
Trigger: TGGCATCCAGTTGGTACAGCATATGGTGGTTCTTCT...GCCCCATATTGAGCATACTTCATTGTATTCAGCTGTTTTCCTGTCAGCCATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000251943.8
ENST00000394780.8
ENST00000436609.5
ENST00000470971.5
ENST00000610588.4
ENST00000621367.4
ENST00000623144.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR GCA 90 bp ACTGAAGGGTTCAGGTACCACCGTTCCTCTACCAATTTGCAGGATAAGTCGGTTAAGAATACTTCATACTaGTGGATCTTACATACCCTG +
Preference number: 4 (lower is better)
Translates to: TEGFRYHRSSTNLQDKSVKNTSY*WILHTL
Trigger: CAGGGTATGTAAGATCCAGCAGTATGAAGTATTCTT...AACCGACTTATCCTGCAAATTGGTAGAGGAACGGTGGTACCTGAACCCTTCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623144.3
ENST00000623148.3
CDS-3UTR CCA 90 bp AGGTACAATAGAAGAGATGACCCTCTTTGTGTAGCTGCTTTGCCAGTTCCAGCTTATAACCACTACGAGTaGCTTTCCTTTTTCCAGAGT +
Preference number: 4 (lower is better)
Translates to: RYNRRDDPLCVAALPVPAYNHYE*LSFFQS
Trigger: ACTCTGGAAAAAGGAAAGCCACTCGTAGTGGTTATA...AGCTGGAACTGGCAAAGCAGCTACACAAAGAGGGTCATCTCTTCTATTGTACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000468657.5
ENST00000470971.5
ENST00000471924.5
ENST00000482374.5
ENST00000489033.5
ENST00000492038.5
ENST00000495283.5
ENST00000622997.3
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR CCA 90 bp TCCTTGGGATCTCCCAACCGTTCCAGGTATTTCTCAAAAGATCCCTCCACATATTATAACCACTACGAGTaGCTTTCCTTTTTCCAGAGT +
Preference number: 4 (lower is better)
Translates to: SLGSPNRSRYFSKDPSTYYNHYE*LSFFQS
Trigger: ACTCTGGAAAAAGGAAAGCCACTCGTAGTGGTTATA...ATATGTGGAGGGATCTTTTGAGAAATACCTGGAACGGTTGGGAGATCCCAAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487141.5
CDS-3UTR CCA 90 bp TGGCCCTTTGGCAAGCTTCTAGTGTCTCAAGGAAGAACTGCAGGTACAATAGAATATAACCACTACGAGTaGCTTTCCTTTTTCCAGAGT +
Preference number: 4 (lower is better)
Translates to: WPFGKLLVSQGRTAGTIEYNHYE*LSFFQS
Trigger: ACTCTGGAAAAAGGAAAGCCACTCGTAGTGGTTATA...TTCTATTGTACCTGCAGTTCTTCCTTGAGACACTAGAAGCTTGCCAAAGGGCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492038.5
CDS-3UTR CCA 90 bp ACAGGAAAACAGCTGAATACAATGAAGTATGCTCAATATGGGGCTAGTTGTACACAGAAGCAATGGACTTaGCTTGCCCAGGACAAGTCA +
Preference number: 4 (lower is better)
Translates to: TGKQLNTMKYAQYGASCTQKQWT*LAQDKS
Trigger: TGACTTGTCCTGGGCAAGCCAAGTCCATTGCTTCTG...TGTACAACTAGCCCCATATTGAGCATACTTCATTGTATTCAGCTGTTTTCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000251943.8
ENST00000394780.8
ENST00000436609.5
ENST00000610588.4
ENST00000621367.4
ENST00000623144.3
ENST00000624161.3
ENST00000636363.1
CDS-3UTR CCA 90 bp AAAACTGATATCACAGAATGCAACTGGCTTCAGATAATTCTCAAGAAACGTGAACAGGAGCAGAAGCAATaGACTTGGCTTGCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: KTDITECNWLQIILKKREQEQKQ*TWLAQD
Trigger: GTCCTGGGCAAGCCAAGTCCATTGCTTCTGCTCCTG...TTCACGTTTCTTGAGAATTATCTGAAGCCAGTTGCATTCTGTGATATCAGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000251943.8
ENST00000394780.8
ENST00000436609.5
ENST00000610588.4
ENST00000621367.4
ENST00000624161.3
ENST00000636363.1
CDS-3UTR CCA 90 bp ACTGATATCACAGAATGCAACTGGCTTCAGATAATTCTCAAGAAACGTGAAGAGGGCAAGAGGCATCCTTaGCAGTCAGCTTTCGAAACA +
Preference number: 4 (lower is better)
Translates to: TDITECNWLQIILKKREEGKRHP*QSAFET
Trigger: TGTTTCGAAAGCTGACTGCCAAGGATGCCTCTTGCC...CTCTTCACGTTTCTTGAGAATTATCTGAAGCCAGTTGCATTCTGTGATATCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000251943.8
ENST00000394780.8
ENST00000436609.5
ENST00000610588.4
ENST00000621367.4
ENST00000624161.3
ENST00000636363.1
CDS-3UTR CCA 90 bp GTGCAAAAGACACCAATTCAATACAGTGCAGTAAAACACTTACATACATCCAGTACAACTGCTCCGAAATaGCCCGAAAGAGGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: VQKTPIQYSAVKHLHTSSTTAPK*PERGKR
Trigger: CCTCTTGCCTCTTTCGGGCCATTTCGGAGCAGTTGT...ACTGGATGTATGTAAGTGTTTTACTGCACTGTATTGAATTGGTGTCTTTTGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000251943.8
ENST00000394780.8
ENST00000436609.5
ENST00000610588.4
ENST00000621367.4
ENST00000624161.3
CDS-3UTR CCA 90 bp GATAAATCTAAAGCAGAGAACCATGTGCCTTCAAAACTGATATCACAGAATGCAACAACTGCTCCGAAATaGCCCGAAAGAGGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: DKSKAENHVPSKLISQNATTAPK*PERGKR
Trigger: CCTCTTGCCTCTTTCGGGCCATTTCGGAGCAGTTGT...TGCATTCTGTGATATCAGTTTTGAAGGCACATGGTTCTCTGCTTTAGATTTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000251943.8
ENST00000394780.8
ENST00000436609.5
ENST00000610588.4
ENST00000621367.4
ENST00000624161.3
ENST00000636363.1
CDS-3UTR CCA 90 bp GCTAACTGTGCAAAAGACACCAATTCAATACAGTGCAGTAAAACACTTACATACACAACTGCTCCGAAATaGCCCGAAAGAGGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: ANCAKDTNSIQCSKTLTYTTAPK*PERGKR
Trigger: CCTCTTGCCTCTTTCGGGCCATTTCGGAGCAGTTGT...GTATGTAAGTGTTTTACTGCACTGTATTGAATTGGTGTCTTTTGCACAGTTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000251943.8
ENST00000394780.8
ENST00000436609.5
ENST00000610588.4
ENST00000621367.4
ENST00000624161.3
CDS-3UTR CCA 90 bp GCAAAAGACACCAATTCAATACAGTGCAGTAAAACACTTACATACATCCAGTATGGCCAGCACTTTCCTTaGGATCTCCCAACCGTTCCA +
Preference number: 4 (lower is better)
Translates to: AKDTNSIQCSKTLTYIQYGQHFP*DLPTVP
Trigger: TGGAACGGTTGGGAGATCCCAAGGAAAGTGCTGGCC...ATACTGGATGTATGTAAGTGTTTTACTGCACTGTATTGAATTGGTGTCTTTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000251943.8
ENST00000394780.8
ENST00000436609.5
ENST00000470971.5
ENST00000610588.4
ENST00000621367.4
ENST00000624161.3
CDS-3UTR CCA 90 bp ACAGGAAAACAGCTGAATACAATGAAGTATGCTCAATATGGGGCTAGTTGTACAGCTCTTATTTCCAGCTaGCCAGCACTTTCCTTGGGA +
Preference number: 4 (lower is better)
Translates to: TGKQLNTMKYAQYGASCTALISS*PALSLG
Trigger: TCCCAAGGAAAGTGCTGGCCAGCTGGAAATAAGAGC...TGTACAACTAGCCCCATATTGAGCATACTTCATTGTATTCAGCTGTTTTCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000251943.8
ENST00000394780.8
ENST00000436609.5
ENST00000470971.5
ENST00000610588.4
ENST00000621367.4
ENST00000623144.3
ENST00000624161.3
CDS-3UTR CCA 90 bp TGTGCCTTCAAAACTGATATCACAGAATGCAACTGGCTTCAGATAATTCTCAAGGCTCTTATTTCCAGCTaGCCAGCACTTTCCTTGGGA +
Preference number: 4 (lower is better)
Translates to: CAFKTDITECNWLQIILKALISS*PALSLG
Trigger: TCCCAAGGAAAGTGCTGGCCAGCTGGAAATAAGAGC...CTTGAGAATTATCTGAAGCCAGTTGCATTCTGTGATATCAGTTTTGAAGGCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000251943.8
ENST00000394780.8
ENST00000436609.5
ENST00000470971.5
ENST00000610588.4
ENST00000621367.4
ENST00000624161.3
CDS-3UTR CCA 90 bp GCAGAGAACCATGTGCCTTCAAAACTGATATCACAGAATGCAACTGGCTTCAGAATCTGTGACATAAGTTaGAGGTTTTCCAGGAAAGCG +
Preference number: 4 (lower is better)
Translates to: AENHVPSKLISQNATGFRICDIS*RFSRKA
Trigger: CGCTTTCCTGGAAAACCTCCAACTTATGTCACAGAT...TCTGAAGCCAGTTGCATTCTGTGATATCAGTTTTGAAGGCACATGGTTCTCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000251943.8
ENST00000394780.8
ENST00000436609.5
ENST00000470971.5
ENST00000610588.4
ENST00000621367.4
ENST00000624161.3
ENST00000636363.1
CDS-3UTR CCA 90 bp CTGCTCCATGAGGGACAGATGAAGAATCAGCATTCGGAAAAGTATCATTTGCTGATTACGATAGATTTCTaGATCCAGGGCTTTGAGCAC +
Preference number: 4 (lower is better)
Translates to: LLHEGQMKNQHSEKYHLLITIDF*IQGFEH
Trigger: GTGCTCAAAGCCCTGGATCCAGAAATCTATCGTAAT...CAGCAAATGATACTTTTCCGAATGCTGATTCTTCATCTGTCCCTCATGGAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000470971.5
ENST00000495283.5
ENST00000623144.3
ENST00000623148.3
ENST00000624161.3
CDS-3UTR CCA 90 bp ACTGCTAACTGTGCAAAAGACACCAATTCAATACAGTGCAGTAAAACACTTACAACCGAGATGAATTCCTaGGCATCCCATATCCCCGAC +
Preference number: 4 (lower is better)
Translates to: TANCAKDTNSIQCSKTLTTEMNS*ASHIPD
Trigger: GTCGGGGATATGGGATGCCCAGGAATTCATCTCGGT...TGTAAGTGTTTTACTGCACTGTATTGAATTGGTGTCTTTTGCACAGTTAGCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000251943.8
ENST00000394780.8
ENST00000436609.5
ENST00000470971.5
ENST00000610588.4
ENST00000621367.4
ENST00000624161.3
CDS-3UTR CCA 90 bp GCTAACTGTGCAAAAGACACCAATTCAATACAGTGCAGTAAAACACTTACATACACCGAGATGAATTCCTaGGCATCCCATATCCCCGAC +
Preference number: 4 (lower is better)
Translates to: ANCAKDTNSIQCSKTLTYTEMNS*ASHIPD
Trigger: GTCGGGGATATGGGATGCCCAGGAATTCATCTCGGT...GTATGTAAGTGTTTTACTGCACTGTATTGAATTGGTGTCTTTTGCACAGTTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000251943.8