RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ALG11 (Homo sapiens)

Ensembl gene IDs: ENSG00000253710

Ensembl transcript IDs: ENST00000519151.1, ENST00000521508.2, ENST00000523764.1, ENST00000616513.1, ENST00000649340.2, ENST00000649651.2, ENST00000649708.2, ENST00000650049.2, ENST00000679359.1, ENST00000679495.1, ENST00000679544.1, ENST00000680793.1, ENST00000680950.1, ENST00000681047.1, ENST00000681053.1, ENST00000681145.1, ENST00000681226.1

Found 577 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCCACGGCTGGAGCAGCTGGGACACAGGGTACCAAGTCCCTAGGCTaGACACAGCACAGGGCCCCTGCACCTGGCCCACAAAACCACTTT +
Preference number: 1 (lower is better)
Translates to: ATAGAAGTQGTKSLG*TQHRAPAPGPQNHF
Trigger: AAAGTGGTTTTGTGGGCCAGGTGCAGGGGCCCTGTGCTGTGTGCAGCCTAGGGACTTGGTACCCTGTGTCCCAGCTGCTCCAGCCGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616513.1
3UTR CCA 90 bp GGCTTGGGGCTTTCACCCTCTGAAGCCACAGCACTAGCTCTGCATTaGCCCCTTTCAGCCACGGCTGGAGCAGCTGGGACACAGGGTACC +
Preference number: 1 (lower is better)
Translates to: GLGLSPSEATALALH*PLSATAGAAGTQGT
Trigger: GGTACCCTGTGTCCCAGCTGCTCCAGCCGTGGCTGAAAGGGGCCAATGCAGAGCTAGTGCTGTGGCTTCAGAGGGTGAAAGCCCCAAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616513.1
3UTR GCA 90 bp GCACCTGGCCCACAAAACCACTTTTTCCTCCTGGGCCTCCAGGCCTaGCATGAGAGAGGCTGCCATGAAGGTCTCCGACATTGCCTGGAG +
Preference number: 1 (lower is better)
Translates to: APGPQNHFFLLGLQA*HERGCHEGLRHCLE
Trigger: CTCCAGGCAATGTCGGAGACCTTCATGGCAGCCTCTCTCATGGCAGGCCTGGAGGCCCAGGAGGAAAAAGTGGTTTTGTGGGCCAGGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616513.1
3UTR TCA 90 bp TTGCAGGGTACAGCCTCCCTCCTGGCTGCTTTCATGGGCCGGCGTTaGGTGTCTGAGGTTTTTCCAGGCACACGGTGCAAGCTGTCAGTG +
Preference number: 1 (lower is better)
Translates to: LQGTASLLAAFMGRR*VSEVFPGTRCKLSV
Trigger: CACTGACAGCTTGCACCGTGTGCCTGGAAAAACCTCAGACACTCAACGCCGGCCCATGAAAGCAGCCAGGAGGGAGGCTGTACCCTGCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616513.1
3UTR TCA 90 bp TACAGCCTCCCTCCTGGCTGCTTTCATGGGCCGGCGTTGAGTGTCTaGGGTTTTTCCAGGCACACGGTGCAAGCTGTCAGTGGATCTACC +
Preference number: 1 (lower is better)
Translates to: YSLPPGCFHGPALSV*GFSRHTVQAVSGST
Trigger: GGTAGATCCACTGACAGCTTGCACCGTGTGCCTGGAAAAACCTCAGACACTCAACGCCGGCCCATGAAAGCAGCCAGGAGGGAGGCTGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616513.1
3UTR GCA 90 bp CTGGCAGAGGTTCTCCATGAGGGCCCTGCCCCGGTGGCAAACTTTTaGCTGGGCATCCAGGCGTTTCTATACATCTTCTGCAATCTAGGT +
Preference number: 1 (lower is better)
Translates to: LAEVLHEGPAPVANF*LGIQAFLYIFCNLG
Trigger: ACCTAGATTGCAGAAGATGTATAGAAACGCCTGGATGCCCAGGCAAAAGTTTGCCACCGGGGCAGGGCCCTCATGGAGAACCTCTGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616513.1
3UTR GCA 90 bp GTCATGCTTAAGCAAGAGGTGGGTTCCCATGGTCTTGAGCAGCTCTaGCCCTGTAGATTTGCAGGGTACAGCCTCCCTCCTGGCTGCTTT +
Preference number: 1 (lower is better)
Translates to: VMLKQEVGSHGLEQL*PCRFAGYSLPPGCF
Trigger: AAAGCAGCCAGGAGGGAGGCTGTACCCTGCAAATCTACAGGGGCAGAGCTGCTCAAGACCATGGGAACCCACCTCTTGCTTAAGCATGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616513.1
3UTR GCA 90 bp CTCCAGGCCTGCCATGAGAGAGGCTGCCATGAAGGTCTCCGACATTaGCTGGAGACATTTTCCCCCATGGTCTTCAGGATTAACATTAGG +
Preference number: 1 (lower is better)
Translates to: LQACHERGCHEGLRH*LETFSPMVFRINIR
Trigger: CCTAATGTTAATCCTGAAGACCATGGGGGAAAATGTCTCCAGGCAATGTCGGAGACCTTCATGGCAGCCTCTCTCATGGCAGGCCTGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616513.1
3UTR CCA 90 bp CCTTTGACTCCAGGTCTCACATCCAGGTCATGCTTAAGCAAGAGGTaGGTTCCCATGGTCTTGAGCAGCTCTGCCCCTGTAGATTTGCAG +
Preference number: 1 (lower is better)
Translates to: PLTPGLTSRSCLSKR*VPMVLSSSAPVDLQ
Trigger: CTGCAAATCTACAGGGGCAGAGCTGCTCAAGACCATGGGAACCCACCTCTTGCTTAAGCATGACCTGGATGTGAGACCTGGAGTCAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616513.1
3UTR CCA 90 bp CCACAACACATGGGAATTCTGGGAGACACAATTCAAACTGAGATTTaGGTGGGGACATGGCCAAACCATATCATTCTGCCCTGGCCCCTC +
Preference number: 1 (lower is better)
Translates to: PQHMGILGDTIQTEI*VGTWPNHIILPWPL
Trigger: GAGGGGCCAGGGCAGAATGATATGGTTTGGCCATGTCCCCACCCAAATCTCAGTTTGAATTGTGTCTCCCAGAATTCCCATGTGTTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616513.1
3UTR GCA 90 bp ACATTTTCCTGGCTTCTTCTGAGCCCTCCAAACTGTTCCAGCCTCTaGCTGTTGCCCAGTTCCAAAGTCGCTTCCACATTTTTGGGTATC +
Preference number: 1 (lower is better)
Translates to: TFSWLLLSPPNCSSL*LLPSSKVASTFLGI
Trigger: GATACCCAAAAATGTGGAAGCGACTTTGGAACTGGGCAACAGGCAGAGGCTGGAACAGTTTGGAGGGCTCAGAAGAAGCCAGGAAAATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616513.1
3UTR CCA 90 bp AATAGCATGGGAAAGACCGGCCCCCATGATTCAATTACCTTCCCCTaGGTCCCTTCCACAACACATGGGAATTCTGGGAGACACAATTCA +
Preference number: 1 (lower is better)
Translates to: NSMGKTGPHDSITFP*VPSTTHGNSGRHNS
Trigger: TGAATTGTGTCTCCCAGAATTCCCATGTGTTGTGGAAGGGACCCAGGGGAAGGTAATTGAATCATGGGGGCCGGTCTTTCCCATGCTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616513.1
3UTR CCA 90 bp AACACATGGGAATTCTGGGAGACACAATTCAAACTGAGATTTGGGTaGGGACATGGCCAAACCATATCATTCTGCCCTGGCCCCTCCAAA +
Preference number: 1 (lower is better)
Translates to: NTWEFWETQFKLRFG*GHGQTISFCPGPSK
Trigger: TTTGGAGGGGCCAGGGCAGAATGATATGGTTTGGCCATGTCCCCACCCAAATCTCAGTTTGAATTGTGTCTCCCAGAATTCCCATGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616513.1
3UTR CCA 90 bp CAGTTCCCAACAAGTTCTTCATCTCCATCTGAGACCACCTCAGCCTaGATTTCGTTGTCCATATCACTATCCGCATTTTGTTCAAAGCCA +
Preference number: 1 (lower is better)
Translates to: QFPTSSSSPSETTSA*ISLSISLSAFCSKP
Trigger: TGGCTTTGAACAAAATGCGGATAGTGATATGGACAACGAAATCCAGGCTGAGGTGGTCTCAGATGGAGATGAAGAACTTGTTGGGAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616513.1
3UTR CCA 90 bp AAAATGCTAGGGCTTAAGAAGAGGATGTTTGGTATGGAGGGTATGTaGGGCGAGATGGTGCAAGTCTACGTGACTTGTTCCAATGACTTA +
Preference number: 1 (lower is better)
Translates to: KMLGLKKRMFGMEGM*GEMVQVYVTCSNDL
Trigger: TAAGTCATTGGAACAAGTCACGTAGACTTGCACCATCTCGCCCCACATACCCTCCATACCAAACATCCTCTTCTTAAGCCCTAGCATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649708.2
3UTR TCA 90 bp CTGTGGGTTCAAAACAGCAGGCTTGGACCACTCAAAAATGACATCTaGGAGGAATTAATAGTCATCCTGAAAGTTCTGCAGACAGACGCT +
Preference number: 1 (lower is better)
Translates to: LWVQNSRLGPLKNDI*EELIVILKVLQTDA
Trigger: AGCGTCTGTCTGCAGAACTTTCAGGATGACTATTAATTCCTCTCAGATGTCATTTTTGAGTGGTCCAAGCCTGCTGTTTTGAACCCACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
3UTR TCA 90 bp TCCACTGCTGTGGGTTCAAAACAGCAGGCTTGGACCACTCAAAAATaGCATCTGAGAGGAATTAATAGTCATCCTGAAAGTTCTGCAGAC +
Preference number: 1 (lower is better)
Translates to: STAVGSKQQAWTTQK*HLRGINSHPESSAD
Trigger: GTCTGCAGAACTTTCAGGATGACTATTAATTCCTCTCAGATGTCATTTTTGAGTGGTCCAAGCCTGCTGTTTTGAACCCACAGCAGTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
3UTR TCA 90 bp ACAGTCCAAAGTCTCATCCGAGACAAGGCAAGTCCCTTCTGCCTATaGGCCTGTAAAATCAAAAGTAAGCTAGTTACTTCCCAGATACAA +
Preference number: 1 (lower is better)
Translates to: TVQSLIRDKASPFCL*ACKIKSKLVTSQIQ
Trigger: TTGTATCTGGGAAGTAACTAGCTTACTTTTGATTTTACAGGCTCATAGGCAGAAGGGACTTGCCTTGTCTCGGATGAGACTTTGGACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616513.1
3UTR TCA 90 bp ATTCCTGATCAGAGAATCTGCTTACAGATGCACGAGCACTTTTTCTaGTTTGGAGTCTCTTTTCTGCAGACATGGAAAGAATGTGAGCGA +
Preference number: 1 (lower is better)
Translates to: IPDQRICLQMHEHFF*FGVSFLQTWKECER
Trigger: TCGCTCACATTCTTTCCATGTCTGCAGAAAAGAGACTCCAAATCAGAAAAAGTGCTCGTGCATCTGTAAGCAGATTCTCTGATCAGGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000523764.1
ENST00000650049.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681145.1
3UTR GCA 90 bp GCTTACAGATGCACGAGCACTTTTTCTGATTTGGAGTCTCTTTTCTaGAGACATGGAAAGAATGTGAGCGATAGTTTCAGCATAGTCTTC +
Preference number: 1 (lower is better)
Translates to: AYRCTSTFSDLESLF*RHGKNVSDSFSIVF
Trigger: GAAGACTATGCTGAAACTATCGCTCACATTCTTTCCATGTCTGCAGAAAAGAGACTCCAAATCAGAAAAAGTGCTCGTGCATCTGTAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000523764.1
ENST00000650049.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681145.1
3UTR TCA 90 bp TTTGTTACGACAACCTCCAATGAGGACAAGTTTAAGCGAAGGAGGTaGCTCAACCATCTTCTTATTCAGCAATTTAGCAAAGGCTCTGAT +
Preference number: 1 (lower is better)
Translates to: FVTTTSNEDKFKRRR*LNHLLIQQFSKGSD
Trigger: ATCAGAGCCTTTGCTAAATTGCTGAATAAGAAGATGGTTGAGTCACCTCCTTCGCTTAAACTTGTCCTCATTGGAGGTTGTCGTAACAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000650049.2
ENST00000679359.1
ENST00000681047.1
3UTR TCA 90 bp AAATATCAACAAAACACAAGTTCAGCTGCCCTCCGCTTGCAAAATTaGATAACAAGGACAAGGTGCAGTAGAAGGAAAGTGCCTTTATTT +
Preference number: 1 (lower is better)
Translates to: KYQQNTSSAALRLQN*ITRTRCSRRKVPLF
Trigger: AAATAAAGGCACTTTCCTTCTACTGCACCTTGTCCTTGTTATTCAATTTTGCAAGCGGAGGGCAGCTGAACTTGTGTTTTGTTGATATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649708.2
3UTR TCA 90 bp TGGGCCAGGAGTCAGAATATCCAGGTTATAATCTTGATTCTTTCATaGAACAGCTTTGTGACACTGAAGGAATCTACTAAATTCTTTAGA +
Preference number: 1 (lower is better)
Translates to: WARSQNIQVIILILS*NSFVTLKESTKFFR
Trigger: TCTAAAGAATTTAGTAGATTCCTTCAGTGTCACAAAGCTGTTTCATGAAAGAATCAAGATTATAACCTGGATATTCTGACTCCTGGCCCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
3UTR TCA 90 bp TTAAATAACTTTTCCACAGATGATAGGAATGTCACTTCAAATTCCTaGTCAGAGAATCTGCTTACAGATGCACGAGCACTTTTTCTGATT +
Preference number: 1 (lower is better)
Translates to: LNNFSTDDRNVTSNS*SENLLTDARALFLI
Trigger: AATCAGAAAAAGTGCTCGTGCATCTGTAAGCAGATTCTCTGATCAGGAATTTGAAGTGACATTCCTATCATCTGTGGAAAAGTTATTTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000523764.1
ENST00000650049.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681145.1
3UTR-3UTR CCA 90 bp GCAGAGGTTCTCCATGAGGGCCCTGCCCCGGTGGCAAACTTTTGCCTGGGCATCACCACTTTTTCCTCCTaGGCCTCCAGGCCTGCCATG +
Preference number: 2 (lower is better)
Translates to: AEVLHEGPAPVANFCLGITTFSS*ASRPAM
Trigger: CATGGCAGGCCTGGAGGCCCAGGAGGAAAAAGTGGT...GATGCCCAGGCAAAAGTTTGCCACCGGGGCAGGGCCCTCATGGAGAACCTCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000616513.1
3UTR CAA 90 bp AAGAGGTGGGTTCCCATGGTCTTGAGCAGCTCTGCCCCTGTAGATTaGCAGGGTACAGCCTCCCTCCTGGCTGCTTTCATGGGCCGGCGT +
Preference number: 2 (lower is better)
Translates to: KRWVPMVLSSSAPVD*QGTASLLAAFMGRR
Trigger: ACGCCGGCCCATGAAAGCAGCCAGGAGGGAGGCTGTACCCTGCAAATCTACAGGGGCAGAGCTGCTCAAGACCATGGGAACCCACCTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616513.1
3UTR CAA 90 bp CTCACATCCAGGTCATGCTTAAGCAAGAGGTGGGTTCCCATGGTCTaGAGCAGCTCTGCCCCTGTAGATTTGCAGGGTACAGCCTCCCTC +
Preference number: 2 (lower is better)
Translates to: LTSRSCLSKRWVPMV*SSSAPVDLQGTASL
Trigger: GAGGGAGGCTGTACCCTGCAAATCTACAGGGGCAGAGCTGCTCAAGACCATGGGAACCCACCTCTTGCTTAAGCATGACCTGGATGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616513.1
3UTR-3UTR GCA 90 bp GAAAGGATTGCTGGCAGCACCTTGGCCTCTACCACCCTACACACACCTATAAAGCTCCAGGGGAGTTCTTaGCTTCCAGCCACTGAGCGC +
Preference number: 2 (lower is better)
Translates to: ERIAGSTLASTTLHTPIKLQGSS*LPATER
Trigger: GCGCTCAGTGGCTGGAAGGCAAGAACTCCCCTGGAG...CTTTATAGGTGTGTGTAGGGTGGTAGAGGCCAAGGTGCTGCCAGCAATCCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
3UTR-3UTR GCA 90 bp CACCCGCAGGCTCAACACCATGTGAAGCTACCATGGCTTGGGGCTTTCACCCTCAACTGTTCCAGCCTCTaGCTGTTGCCCAGTTCCAAA +
Preference number: 2 (lower is better)
Translates to: HPQAQHHVKLPWLGAFTLNCSSL*LLPSSK
Trigger: TTTGGAACTGGGCAACAGGCAGAGGCTGGAACAGTT...GAGGGTGAAAGCCCCAAGCCATGGTAGCTTCACATGGTGTTGAGCCTGCGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616513.1
3UTR-3UTR CCA 90 bp GCAGAGGTTCTCCATGAGGGCCCTGCCCCGGTGGCAAACTTTTGCCTGGGCATCTCGCTTCCACATTTTTaGGTATCTCTTCAGCAGCAC +
Preference number: 2 (lower is better)
Translates to: AEVLHEGPAPVANFCLGISLPHF*VSLQQH
Trigger: GTGCTGCTGAAGAGATACCCAAAAATGTGGAAGCGA...GATGCCCAGGCAAAAGTTTGCCACCGGGGCAGGGCCCTCATGGAGAACCTCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000616513.1
3UTR-3UTR TCA 90 bp CCCAGTAGGGACTCTGTGTGGGGGCTCCAACCCCACATTTCCCTTCTGCACTGCGCTCCTTGCTACTTTTaGAAATTTCTGCAGCCAGCT +
Preference number: 2 (lower is better)
Translates to: PSRDSVWGLQPHISLLHCAPCYF*KFLQPA
Trigger: AGCTGGCTGCAGAAATTTTCAAAAGTAGCAAGGAGC...GCAGTGCAGAAGGGAAATGTGGGGTTGGAGCCCCCACACAGAGTCCCTACTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000616513.1
3UTR-3UTR GCA 90 bp GCCCAGCGCTCTTTCAAAATGCCACCTTGCCATCTTACAATGCATTATGCTGGTCTCCAGGGGAGTTCTTaGCTTCCAGCCACTGAGCGC +
Preference number: 2 (lower is better)
Translates to: AQRSFKMPPCHLTMHYAGLQGSS*LPATER
Trigger: GCGCTCAGTGGCTGGAAGGCAAGAACTCCCCTGGAG...ACCAGCATAATGCATTGTAAGATGGCAAGGTGGCATTTTGAAAGAGCGCTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
3UTR-3UTR GCA 90 bp AGGTGTGAGACACCGCACCCAGCCCTTAACTGTCGTAATTTTCAAAGTAGTTTCCTCCAGGGGAGTTCTTaGCTTCCAGCCACTGAGCGC +
Preference number: 2 (lower is better)
Translates to: RCETPHPALNCRNFQSSFLQGSS*LPATER
Trigger: GCGCTCAGTGGCTGGAAGGCAAGAACTCCCCTGGAG...GAAACTACTTTGAAAATTACGACAGTTAAGGGCTGGGTGCGGTGTCTCACACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
3UTR-3UTR TCA 90 bp CCAGTACCTAGTATGGAAAGGATTGCTGGCAGCACCTTGGCCTCTACCACCCTAGTCAGTCCCACCTCTTaGCTGTATGCTTTGAGAACA +
Preference number: 2 (lower is better)
Translates to: PVPSMERIAGSTLASTTLVSPTS*LYALRT
Trigger: TGTTCTCAAAGCATACAGTCAAGAGGTGGGACTGAC...TAGGGTGGTAGAGGCCAAGGTGCTGCCAGCAATCCTTTCCATACTAGGTACTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
3UTR-3UTR GCA 90 bp CCAGTACCTAGTATGGAAAGGATTGCTGGCAGCACCTTGGCCTCTACCACCCTATTCTTCTGCCTCACTTaGAGAAACCTCATGAGCTGC +
Preference number: 2 (lower is better)
Translates to: PVPSMERIAGSTLASTTLFFCLT*RNLMSC
Trigger: GCAGCTCATGAGGTTTCTGCAAGTGAGGCAGAAGAA...TAGGGTGGTAGAGGCCAAGGTGCTGCCAGCAATCCTTTCCATACTAGGTACTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
3UTR-3UTR TCA 90 bp GAGGAATTAATAGTCATCCTGAAAGTTCTGCAGACAGACGCTAGCGGACAAACCTGGAATCAGGGCCCCTaGCTGTCACTTCTCCAGCTA +
Preference number: 2 (lower is better)
Translates to: EELIVILKVLQTDASGQTWNQGP*LSLLQL
Trigger: TAGCTGGAGAAGTGACAGTCAGGGGCCCTGATTCCA...GGTTTGTCCGCTAGCGTCTGTCTGCAGAACTTTCAGGATGACTATTAATTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
3UTR-3UTR TCA 90 bp AAATCTCCACTGCTGTGGGTTCAAAACAGCAGGCTTGGACCACTCAAAAATGACGCTGGTCTCAACTGCTaGCCTCATGATCCACCCATC +
Preference number: 2 (lower is better)
Translates to: KSPLLWVQNSRLGPLKNDAGLNC*PHDPPI
Trigger: GATGGGTGGATCATGAGGTCAGCAGTTGAGACCAGC...GTCATTTTTGAGTGGTCCAAGCCTGCTGTTTTGAACCCACAGCAGTGGAGATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
3UTR-3UTR GCA 90 bp GAAAGGATTGCTGGCAGCACCTTGGCCTCTACCACCCTACACACACCTATAAAGTTCTTCTGCCTCACTTaGAGAAACCTCATGAGCTGC +
Preference number: 2 (lower is better)
Translates to: ERIAGSTLASTTLHTPIKFFCLT*RNLMSC
Trigger: GCAGCTCATGAGGTTTCTGCAAGTGAGGCAGAAGAA...CTTTATAGGTGTGTGTAGGGTGGTAGAGGCCAAGGTGCTGCCAGCAATCCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
3UTR-3UTR TCA 90 bp CTCCACTGCTGTGGGTTCAAAACAGCAGGCTTGGACCACTCAAAAATGACATCTTGTCAGAACATCCTGTaGCTGACCCTCTGTTTGCTG +
Preference number: 2 (lower is better)
Translates to: LHCCGFKTAGLDHSKMTSCQNIL*LTLCLL
Trigger: CAGCAAACAGAGGGTCAGTCACAGGATGTTCTGACA...AGATGTCATTTTTGAGTGGTCCAAGCCTGCTGTTTTGAACCCACAGCAGTGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
3UTR-3UTR GCA 90 bp CACCCGCAGGCTCAACACCATGTGAAGCTACCATGGCTTGGGGCTTTCACCCTCACTTTTGAAAATTTCTaGAGCCAGCTTGAATTTCTC +
Preference number: 2 (lower is better)
Translates to: HPQAQHHVKLPWLGAFTLTFENF*SQLEFL
Trigger: GAGAAATTCAAGCTGGCTGCAGAAATTTTCAAAAGT...GAGGGTGAAAGCCCCAAGCCATGGTAGCTTCACATGGTGTTGAGCCTGCGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000616513.1
3UTR-3UTR GCA 90 bp CATTTCAGCATTAACCCATATGTCCACAGTCCAAAGTCTCATCCGAGACAAGGCTGCCATGAGAGAGGCTaGCATGAAGGTCTCCGACAT +
Preference number: 2 (lower is better)
Translates to: HFSINPYVHSPKSHPRQGCHERG*HEGLRH
Trigger: ATGTCGGAGACCTTCATGGCAGCCTCTCTCATGGCA...GCCTTGTCTCGGATGAGACTTTGGACTGTGGACATATGGGTTAATGCTGAAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616513.1
3UTR-3UTR GCA 90 bp CCAGTACCTAGTATGGAAAGGATTGCTGGCAGCACCTTGGCCTCTACCACCCTATCGTTCCACATGGTATaGAGACCAATTGTTGCTTCA +
Preference number: 2 (lower is better)
Translates to: PVPSMERIAGSTLASTTLSFHMV*RPIVAS
Trigger: TGAAGCAACAATTGGTCTGCATACCATGTGGAACGA...TAGGGTGGTAGAGGCCAAGGTGCTGCCAGCAATCCTTTCCATACTAGGTACTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679359.1
ENST00000681047.1
3UTR-3UTR GCA 90 bp GAAAGGATTGCTGGCAGCACCTTGGCCTCTACCACCCTACACACACCTATAAAGACTCCAATCCCAAAATaGTCGTTCCACATGGTATGC +
Preference number: 2 (lower is better)
Translates to: ERIAGSTLASTTLHTPIKTPIPK*SFHMVC
Trigger: GCATACCATGTGGAACGAGCATTTTGGGATTGGAGT...CTTTATAGGTGTGTGTAGGGTGGTAGAGGCCAAGGTGCTGCCAGCAATCCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679359.1
ENST00000681047.1
3UTR-3UTR CCA 90 bp GCCCAGCGCTCTTTCAAAATGCCACCTTGCCATCTTACAATGCATTATGCTGGTTGTTCCTGCATAGCTTaGCGAGCCTCCAGGTCATAT +
Preference number: 2 (lower is better)
Translates to: AQRSFKMPPCHLTMHYAGCSCIA*RASRSY
Trigger: ATATGACCTGGAGGCTCGCCAAGCTATGCAGGAACA...ACCAGCATAATGCATTGTAAGATGGCAAGGTGGCATTTTGAAAGAGCGCTGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
3UTR-3UTR CCA 90 bp CCAGTACCTAGTATGGAAAGGATTGCTGGCAGCACCTTGGCCTCTACCACCCTAGCTTTAATGAGAAACTaGCGTCTTTTCTTGGCACTG +
Preference number: 2 (lower is better)
Translates to: PVPSMERIAGSTLASTTLALMRN*RLFLAL
Trigger: CAGTGCCAAGAAAAGACGCCAGTTTCTCATTAAAGC...TAGGGTGGTAGAGGCCAAGGTGCTGCCAGCAATCCTTTCCATACTAGGTACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
3UTR-3UTR CCA 90 bp CAGCTCTGCCCCTGTAGATTTGCAGGGTACAGCCTCCCTCCTGGCTGCTTTCATAGACATTTTCCCCCATaGTCTTCAGGATTAACATTA +
Preference number: 2 (lower is better)
Translates to: QLCPCRFAGYSLPPGCFHRHFPP*SSGLTL
Trigger: TAATGTTAATCCTGAAGACCATGGGGGAAAATGTCT...ATGAAAGCAGCCAGGAGGGAGGCTGTACCCTGCAAATCTACAGGGGCAGAGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000616513.1
3UTR-3UTR TCA 90 bp CTCCACTGCTGTGGGTTCAAAACAGCAGGCTTGGACCACTCAAAAATGACATCTGTCAGTCCCACCTCTTaGCTGTATGCTTTGAGAACA +
Preference number: 2 (lower is better)
Translates to: LHCCGFKTAGLDHSKMTSVSPTS*LYALRT
Trigger: TGTTCTCAAAGCATACAGTCAAGAGGTGGGACTGAC...AGATGTCATTTTTGAGTGGTCCAAGCCTGCTGTTTTGAACCCACAGCAGTGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
3UTR-3UTR TCA 90 bp AAATCTCCACTGCTGTGGGTTCAAAACAGCAGGCTTGGACCACTCAAAAATGACCCCTTAACACAAAGATaGATCAGCCTGTGGATGGGG +
Preference number: 2 (lower is better)
Translates to: KSPLLWVQNSRLGPLKNDPLTQR*ISLWMG
Trigger: CCCCATCCACAGGCTGATTCATCTTTGTGTTAAGGG...GTCATTTTTGAGTGGTCCAAGCCTGCTGTTTTGAACCCACAGCAGTGGAGATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
3UTR-3UTR TCA 90 bp GAGGAATTAATAGTCATCCTGAAAGTTCTGCAGACAGACGCTAGCGGACAAACCTGTCAGAACATCCTGTaGCTGACCCTCTGTTTGCTG +
Preference number: 2 (lower is better)
Translates to: EELIVILKVLQTDASGQTCQNIL*LTLCLL
Trigger: CAGCAAACAGAGGGTCAGTCACAGGATGTTCTGACA...GGTTTGTCCGCTAGCGTCTGTCTGCAGAACTTTCAGGATGACTATTAATTCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
3UTR-3UTR TCA 90 bp ACTTACAGTTCCATATGGCTGGGGAGACCTCAGAATCACGGCAGGAGGTGTAAGAGTCCCTTCTGCCTATaGGCCTGTAAAATCAAAAGT +
Preference number: 2 (lower is better)
Translates to: TYSSIWLGRPQNHGRRCKSPFCL*ACKIKS
Trigger: ACTTTTGATTTTACAGGCTCATAGGCAGAAGGGACT...CTTACACCTCCTGCCGTGATTCTGAGGTCTCCCCAGCCATATGGAACTGTAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000616513.1
3UTR-3UTR TCA 90 bp CCAGTACCTAGTATGGAAAGGATTGCTGGCAGCACCTTGGCCTCTACCACCCTATTTAAGCGAAGGAGGTaGCTCAACCATCTTCTTATT +
Preference number: 2 (lower is better)
Translates to: PVPSMERIAGSTLASTTLFKRRR*LNHLLI
Trigger: AATAAGAAGATGGTTGAGTCACCTCCTTCGCTTAAA...TAGGGTGGTAGAGGCCAAGGTGCTGCCAGCAATCCTTTCCATACTAGGTACTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679359.1
ENST00000681047.1
3UTR-3UTR TCA 90 bp AGACATGGAAAGAATGTGAGCGATAGTTTCAGCATAGTCTTCTTCACTCTCAGCTGCTTCAGGATACCCTaGGAGACTGAGAGCCGAGAC +
Preference number: 2 (lower is better)
Translates to: RHGKNVSDSFSIVFFTLSCFRIP*ETESRD
Trigger: GTCTCGGCTCTCAGTCTCTCAGGGTATCCTGAAGCA...GCTGAGAGTGAAGAAGACTATGCTGAAACTATCGCTCACATTCTTTCCATGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679359.1
3UTR-3UTR TCA 90 bp AGGTGTGAGACACCGCACCCAGCCCTTAACTGTCGTAATTTTCAAAGTAGTTTCCCCAGCAGTGTGAAGTaGGGATACAGTGAATCTTCC +
Preference number: 2 (lower is better)
Translates to: RCETPHPALNCRNFQSSFPSSVK*GYSESS
Trigger: GGAAGATTCACTGTATCCTCACTTCACACTGCTGGG...GAAACTACTTTGAAAATTACGACAGTTAAGGGCTGGGTGCGGTGTCTCACACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679359.1
ENST00000681047.1
3UTR-3UTR GCA 90 bp CTGGTGGCTCAAAGCCAGATTCTCTGCAACCTGGTTCACATTCATCTCAGCAGCCAAAGCCAGATTCTCTaGAACCTGGTTCACATTCAT +
Preference number: 2 (lower is better)
Translates to: LVAQSQILCNLVHIHLSSQSQIL*NLVHIH
Trigger: ATGAATGTGAACCAGGTTGCAGAGAATCTGGCTTTG...GCTGCTGAGATGAATGTGAACCAGGTTGCAGAGAATCTGGCTTTGAGCCACCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000521508.2
ENST00000523764.1
ENST00000649340.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
ENST00000681145.1
3UTR-3UTR CCA 90 bp GAAAGGATTGCTGGCAGCACCTTGGCCTCTACCACCCTACACACACCTATAAAGCATGTATACCAAGAATaGAAGCCGAAGGCTAGTCAT +
Preference number: 2 (lower is better)
Translates to: ERIAGSTLASTTLHTPIKHVYQE*KPKASH
Trigger: ATGACTAGCCTTCGGCTTCCATTCTTGGTATACATG...CTTTATAGGTGTGTGTAGGGTGGTAGAGGCCAAGGTGCTGCCAGCAATCCTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
3UTR CAA 90 bp TTTGTAAATGAAGAAGCTGAAGGTAGGCCCAGATGTGCTAACTGCTaGCCCAGCGCTCTTTCAAAATGCCACCTTGCCATCTTACAATGC +
Preference number: 2 (lower is better)
Translates to: FVNEEAEGRPRCANC*PSALSKCHLAILQC
Trigger: GCATTGTAAGATGGCAAGGTGGCATTTTGAAAGAGCGCTGGGCAAGCAGTTAGCACATCTGGGCCTACCTTCAGCTTCTTCATTTACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
3UTR-3UTR TCA 90 bp ACTGCTTGCCCAGCGCTCTTTCAAAATGCCACCTTGCCATCTTACAATGCATTAGTCAGTCCCACCTCTTaGCTGTATGCTTTGAGAACA +
Preference number: 2 (lower is better)
Translates to: TACPALFQNATLPSYNALVSPTS*LYALRT
Trigger: TGTTCTCAAAGCATACAGTCAAGAGGTGGGACTGAC...TAATGCATTGTAAGATGGCAAGGTGGCATTTTGAAAGAGCGCTGGGCAAGCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
3UTR-3UTR TCA 90 bp AAATCTCCACTGCTGTGGGTTCAAAACAGCAGGCTTGGACCACTCAAAAATGACGTCAGTCCCACCTCTTaGCTGTATGCTTTGAGAACA +
Preference number: 2 (lower is better)
Translates to: KSPLLWVQNSRLGPLKNDVSPTS*LYALRT
Trigger: TGTTCTCAAAGCATACAGTCAAGAGGTGGGACTGAC...GTCATTTTTGAGTGGTCCAAGCCTGCTGTTTTGAACCCACAGCAGTGGAGATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
3UTR-3UTR TCA 90 bp CCCTCCAAATCTCACGTCATCACATTTCAAAACCAATTATGCCTTCCCAACAGTTTCATGGGCCGGCGTTaGGTGTCTGAGGTTTTTCCA +
Preference number: 2 (lower is better)
Translates to: PSKSHVITFQNQLCLPNSFMGRR*VSEVFP
Trigger: TGGAAAAACCTCAGACACTCAACGCCGGCCCATGAA...ACTGTTGGGAAGGCATAATTGGTTTTGAAATGTGATGACGTGAGATTTGGAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616513.1
3UTR-3UTR GCA 90 bp AGGTGTGAGACACCGCACCCAGCCCTTAACTGTCGTAATTTTCAAAGTAGTTTCCCTGATCAGAGAATCTaGTTACAGATGCACGAGCAC +
Preference number: 2 (lower is better)
Translates to: RCETPHPALNCRNFQSSFPDQRI*LQMHEH
Trigger: GTGCTCGTGCATCTGTAAGCAGATTCTCTGATCAGG...GAAACTACTTTGAAAATTACGACAGTTAAGGGCTGGGTGCGGTGTCTCACACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
3UTR-3UTR GCA 90 bp AAATCTCCACTGCTGTGGGTTCAAAACAGCAGGCTTGGACCACTCAAAAATGACCCTGATCAGAGAATCTaGTTACAGATGCACGAGCAC +
Preference number: 2 (lower is better)
Translates to: KSPLLWVQNSRLGPLKNDPDQRI*LQMHEH
Trigger: GTGCTCGTGCATCTGTAAGCAGATTCTCTGATCAGG...GTCATTTTTGAGTGGTCCAAGCCTGCTGTTTTGAACCCACAGCAGTGGAGATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
3UTR-3UTR GCA 90 bp GAGGAATTAATAGTCATCCTGAAAGTTCTGCAGACAGACGCTAGCGGACAAACCTTCTTCTGCCTCACTTaGAGAAACCTCATGAGCTGC +
Preference number: 2 (lower is better)
Translates to: EELIVILKVLQTDASGQTFFCLT*RNLMSC
Trigger: GCAGCTCATGAGGTTTCTGCAAGTGAGGCAGAAGAA...GGTTTGTCCGCTAGCGTCTGTCTGCAGAACTTTCAGGATGACTATTAATTCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
3UTR-3UTR GCA 90 bp AGAGGCTGCCATGAAGGTCTCCGACATTGCCTGGAGACATTTTCCCCCATGGTCACTGCATTGTCAGGCTaGAAATTTTCTGAACTTTTA +
Preference number: 2 (lower is better)
Translates to: RGCHEGLRHCLETFSPMVTALSG*KFSELL
Trigger: TAAAAGTTCAGAAAATTTGCAGCCTGACAATGCAGT...GACCATGGGGGAAAATGTCTCCAGGCAATGTCGGAGACCTTCATGGCAGCCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000616513.1
3UTR-3UTR GCA 90 bp ACTGCTTGCCCAGCGCTCTTTCAAAATGCCACCTTGCCATCTTACAATGCATTAACATCAGGAACACACTaGATTAGAGCTTCCCAGCCA +
Preference number: 2 (lower is better)
Translates to: TACPALFQNATLPSYNALTSGTH*IRASQP
Trigger: TGGCTGGGAAGCTCTAATGCAGTGTGTTCCTGATGT...TAATGCATTGTAAGATGGCAAGGTGGCATTTTGAAAGAGCGCTGGGCAAGCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679359.1
ENST00000681047.1
3UTR-3UTR TCA 90 bp ATAATTGTGCCAGCTGCCATACACTCCACAACTCCAATCCCAAAATGCTCGTTCCTGATCTGCAATGGATaGTTCTTTTCCGGCCTAAAC +
Preference number: 2 (lower is better)
Translates to: IIVPAAIHSTTPIPKCSFLICNG*FFSGLN
Trigger: GTTTAGGCCGGAAAAGAATCATCCATTGCAGATCAG...GAACGAGCATTTTGGGATTGGAGTTGTGGAGTGTATGGCAGCTGGCACAATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000650049.2
ENST00000679359.1
ENST00000681047.1
3UTR-3UTR GCA 90 bp TGCCCAGCGCTCTTTCAAAATGCCACCTTGCCATCTTACAATGCATTATGCTGGCAAAGCCAGATTCTCTaGAACCTGGTTCACATTCAT +
Preference number: 2 (lower is better)
Translates to: CPALFQNATLPSYNALCWQSQIL*NLVHIH
Trigger: ATGAATGTGAACCAGGTTGCAGAGAATCTGGCTTTG...CCAGCATAATGCATTGTAAGATGGCAAGGTGGCATTTTGAAAGAGCGCTGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
3UTR-3UTR GCA 90 bp ACTCTCAGCCAGAAAGCCAGTTATATCTCCTTCGTGAGGAACCACAATGTCAAGACTCCAATCCCAAAATaGTCGTTCCACATGGTATGC +
Preference number: 2 (lower is better)
Translates to: TLSQKASYISFVRNHNVKTPIPK*SFHMVC
Trigger: GCATACCATGTGGAACGAGCATTTTGGGATTGGAGT...CTTGACATTGTGGTTCCTCACGAAGGAGATATAACTGGCTTTCTGGCTGAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000650049.2
ENST00000679359.1
ENST00000681047.1
3UTR-3UTR GCA 90 bp AGTCTTCTTCACTCTCAGCCAGAAAGCCAGTTATATCTCCTTCGTGAGGAACCAACTCCAATCCCAAAATaGTCGTTCCACATGGTATGC +
Preference number: 2 (lower is better)
Translates to: SLLHSQPESQLYLLREEPTPIPK*SFHMVC
Trigger: GCATACCATGTGGAACGAGCATTTTGGGATTGGAGT...TGGTTCCTCACGAAGGAGATATAACTGGCTTTCTGGCTGAGAGTGAAGAAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000650049.2
ENST00000679359.1
ENST00000681047.1
3UTR-3UTR CCA 90 bp GCCCAGCGCTCTTTCAAAATGCCACCTTGCCATCTTACAATGCATTATGCTGGTCATGTATACCAAGAATaGAAGCCGAAGGCTAGTCAT +
Preference number: 2 (lower is better)
Translates to: AQRSFKMPPCHLTMHYAGHVYQE*KPKASH
Trigger: ATGACTAGCCTTCGGCTTCCATTCTTGGTATACATG...ACCAGCATAATGCATTGTAAGATGGCAAGGTGGCATTTTGAAAGAGCGCTGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
3UTR-3UTR CCA 90 bp CTCCACTGCTGTGGGTTCAAAACAGCAGGCTTGGACCACTCAAAAATGACATCTCATGTATACCAAGAATaGAAGCCGAAGGCTAGTCAT +
Preference number: 2 (lower is better)
Translates to: LHCCGFKTAGLDHSKMTSHVYQE*KPKASH
Trigger: ATGACTAGCCTTCGGCTTCCATTCTTGGTATACATG...AGATGTCATTTTTGAGTGGTCCAAGCCTGCTGTTTTGAACCCACAGCAGTGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
3UTR-3UTR CCA 90 bp TGCCCAGCGCTCTTTCAAAATGCCACCTTGCCATCTTACAATGCATTATGCTGGGCTTTAATGAGAAACTaGCGTCTTTTCTTGGCACTG +
Preference number: 2 (lower is better)
Translates to: CPALFQNATLPSYNALCWALMRN*RLFLAL
Trigger: CAGTGCCAAGAAAAGACGCCAGTTTCTCATTAAAGC...CCAGCATAATGCATTGTAAGATGGCAAGGTGGCATTTTGAAAGAGCGCTGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
3UTR-3UTR TCA 90 bp CTCCACTGCTGTGGGTTCAAAACAGCAGGCTTGGACCACTCAAAAATGACATCTGTCACTTCAAATTCCTaGTCAGAGAATCTGCTTACA +
Preference number: 2 (lower is better)
Translates to: LHCCGFKTAGLDHSKMTSVTSNS*SENLLT
Trigger: TGTAAGCAGATTCTCTGATCAGGAATTTGAAGTGAC...AGATGTCATTTTTGAGTGGTCCAAGCCTGCTGTTTTGAACCCACAGCAGTGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
3UTR-3UTR TCA 90 bp TGCCCAGCGCTCTTTCAAAATGCCACCTTGCCATCTTACAATGCATTATGCTGGACATTGATGAATGACTaGGAGGAGACTGCAAAGAAA +
Preference number: 2 (lower is better)
Translates to: CPALFQNATLPSYNALCWTLMND*EETAKK
Trigger: TTTCTTTGCAGTCTCCTCTCAGTCATTCATCAATGT...CCAGCATAATGCATTGTAAGATGGCAAGGTGGCATTTTGAAAGAGCGCTGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
3UTR-3UTR TCA 90 bp AGGTGTGAGACACCGCACCCAGCCCTTAACTGTCGTAATTTTCAAAGTAGTTTCCTGTTTGCTGCTTTTTaGTCTGATGACAGATGGCTT +
Preference number: 2 (lower is better)
Translates to: RCETPHPALNCRNFQSSFLFAAF*SDDRWL
Trigger: AAGCCATCTGTCATCAGATCAAAAAGCAGCAAACAG...GAAACTACTTTGAAAATTACGACAGTTAAGGGCTGGGTGCGGTGTCTCACACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
3UTR-3UTR TCA 90 bp ATAGTCTTCTTCACTCTCAGCCAGAAAGCCAGTTATATCTCCTTCGTGAGGAACCTGATCTGCAATGGATaGTTCTTTTCCGGCCTAAAC +
Preference number: 2 (lower is better)
Translates to: IVFFTLSQKASYISFVRNLICNG*FFSGLN
Trigger: GTTTAGGCCGGAAAAGAATCATCCATTGCAGATCAG...GTTCCTCACGAAGGAGATATAACTGGCTTTCTGGCTGAGAGTGAAGAAGACTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000650049.2
ENST00000679359.1
ENST00000681047.1
3UTR-3UTR TCA 90 bp TCATCTCTAACAAAAAGTTACAATGGTGTGTCAGAACATCCTGTGACTGACCCTCCCAGCAGTGTGAAGTaGGGATACAGTGAATCTTCC +
Preference number: 2 (lower is better)
Translates to: SSLTKSYNGVSEHPVTDPPSSVK*GYSESS
Trigger: GGAAGATTCACTGTATCCTCACTTCACACTGCTGGG...AGGGTCAGTCACAGGATGTTCTGACACACCATTGTAACTTTTTGTTAGAGATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000679359.1
ENST00000681047.1
3UTR-3UTR GCA 90 bp AAATCTCCACTGCTGTGGGTTCAAAACAGCAGGCTTGGACCACTCAAAAATGACCAAAGCCAGATTCTCTaGAACCTGGTTCACATTCAT +
Preference number: 2 (lower is better)
Translates to: KSPLLWVQNSRLGPLKNDQSQIL*NLVHIH
Trigger: ATGAATGTGAACCAGGTTGCAGAGAATCTGGCTTTG...GTCATTTTTGAGTGGTCCAAGCCTGCTGTTTTGAACCCACAGCAGTGGAGATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
3UTR-3UTR GCA 90 bp TGCCCAGCGCTCTTTCAAAATGCCACCTTGCCATCTTACAATGCATTATGCTGGTTCCATTTCTTCCAGTaGCACAGTTGGATTAACCTT +
Preference number: 2 (lower is better)
Translates to: CPALFQNATLPSYNALCWFHFFQ*HSWINL
Trigger: AAGGTTAATCCAACTGTGGCACTGGAAGAAATGGAA...CCAGCATAATGCATTGTAAGATGGCAAGGTGGCATTTTGAAAGAGCGCTGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
3UTR-3UTR GCA 90 bp GAGGAATTAATAGTCATCCTGAAAGTTCTGCAGACAGACGCTAGCGGACAAACCGTAGCCCACATCCTCTaGTTTTATGGGCTTAATGAT +
Preference number: 2 (lower is better)
Translates to: EELIVILKVLQTDASGQTVAHIL*FYGLND
Trigger: ATCATTAAGCCCATAAAAGCAGAGGATGTGGGCTAC...GGTTTGTCCGCTAGCGTCTGTCTGCAGAACTTTCAGGATGACTATTAATTCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
3UTR-3UTR GCA 90 bp AGGTGTGAGACACCGCACCCAGCCCTTAACTGTCGTAATTTTCAAAGTAGTTTCGTAGCCCACATCCTCTaGTTTTATGGGCTTAATGAT +
Preference number: 2 (lower is better)
Translates to: RCETPHPALNCRNFQSSFVAHIL*FYGLND
Trigger: ATCATTAAGCCCATAAAAGCAGAGGATGTGGGCTAC...GAAACTACTTTGAAAATTACGACAGTTAAGGGCTGGGTGCGGTGTCTCACACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
3UTR-3UTR CCA 90 bp ACTGCTTGCCCAGCGCTCTTTCAAAATGCCACCTTGCCATCTTACAATGCATTACATGTATACCAAGAATaGAAGCCGAAGGCTAGTCAT +
Preference number: 2 (lower is better)
Translates to: TACPALFQNATLPSYNALHVYQE*KPKASH
Trigger: ATGACTAGCCTTCGGCTTCCATTCTTGGTATACATG...TAATGCATTGTAAGATGGCAAGGTGGCATTTTGAAAGAGCGCTGGGCAAGCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
3UTR-3UTR CCA 90 bp CACTCTCAGCCAGAAAGCCAGTTATATCTCCTTCGTGAGGAACCACAATGTCAACATGTATACCAAGAATaGAAGCCGAAGGCTAGTCAT +
Preference number: 2 (lower is better)
Translates to: HSQPESQLYLLREEPQCQHVYQE*KPKASH
Trigger: ATGACTAGCCTTCGGCTTCCATTCTTGGTATACATG...TTGACATTGTGGTTCCTCACGAAGGAGATATAACTGGCTTTCTGGCTGAGAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679359.1
ENST00000681047.1
ENST00000681145.1
3UTR-3UTR CCA 90 bp CCCTCCAAATCTCACGTCATCACATTTCAAAACCAATTATGCCTTCCCAACAGTGAGACCACCTCAGCCTaGATTTCGTTGTCCATATCA +
Preference number: 2 (lower is better)
Translates to: PSKSHVITFQNQLCLPNSETTSA*ISLSIS
Trigger: TGATATGGACAACGAAATCCAGGCTGAGGTGGTCTC...ACTGTTGGGAAGGCATAATTGGTTTTGAAATGTGATGACGTGAGATTTGGAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616513.1
3UTR-3UTR CCA 90 bp CACTCTCAGCCAGAAAGCCAGTTATATCTCCTTCGTGAGGAACCACAATGTCAAGACAGCCTTCTCAGTTaGTTTACCCTAAGTTCATCA +
Preference number: 2 (lower is better)
Translates to: HSQPESQLYLLREEPQCQDSLLS*FTLSSS
Trigger: TGATGAACTTAGGGTAAACCAACTGAGAAGGCTGTC...TTGACATTGTGGTTCCTCACGAAGGAGATATAACTGGCTTTCTGGCTGAGAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000650049.2
ENST00000679359.1
ENST00000681047.1
3UTR CAA 90 bp ACAAGTTCTTCATCTCCATCTGAGACCACCTCAGCCTGGATTTCGTaGTCCATATCACTATCCGCATTTTGTTCAAAGCCATTCAACAAG +
Preference number: 2 (lower is better)
Translates to: TSSSSPSETTSAWIS*SISLSAFCSKPFNK
Trigger: CTTGTTGAATGGCTTTGAACAAAATGCGGATAGTGATATGGACAACGAAATCCAGGCTGAGGTGGTCTCAGATGGAGATGAAGAACTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616513.1
3UTR CAA 90 bp GAGCATGTCGGTGCTGATAGTAGGATAATGAACATAGCTTCCAACTaGGCAACCCCCTATATACTTAAACAGAGGAAGCGTAAAAGCGTA +
Preference number: 2 (lower is better)
Translates to: EHVGADSRIMNIASN*ATPYILKQRKRKSV
Trigger: TACGCTTTTACGCTTCCTCTGTTTAAGTATATAGGGGGTTGCCAAGTTGGAAGCTATGTTCATTATCCTACTATCAGCACCGACATGCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000679359.1
ENST00000681047.1
3UTR-3UTR TCA 90 bp AGTCTTCTTCACTCTCAGCCAGAAAGCCAGTTATATCTCCTTCGTGAGGAACCAGTCACTTCAAATTCCTaGTCAGAGAATCTGCTTACA +
Preference number: 2 (lower is better)
Translates to: SLLHSQPESQLYLLREEPVTSNS*SENLLT
Trigger: TGTAAGCAGATTCTCTGATCAGGAATTTGAAGTGAC...TGGTTCCTCACGAAGGAGATATAACTGGCTTTCTGGCTGAGAGTGAAGAAGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000523764.1
ENST00000650049.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681145.1
3UTR-3UTR TCA 90 bp AGGTGTGAGACACCGCACCCAGCCCTTAACTGTCGTAATTTTCAAAGTAGTTTCACATTGATGAATGACTaGGAGGAGACTGCAAAGAAA +
Preference number: 2 (lower is better)
Translates to: RCETPHPALNCRNFQSSFTLMND*EETAKK
Trigger: TTTCTTTGCAGTCTCCTCTCAGTCATTCATCAATGT...GAAACTACTTTGAAAATTACGACAGTTAAGGGCTGGGTGCGGTGTCTCACACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
3UTR-3UTR TCA 90 bp TCATCTCTAACAAAAAGTTACAATGGTGTGTCAGAACATCCTGTGACTGACCCTGGCCACATTGATGAATaGCTGAGAGGAGACTGCAAA +
Preference number: 2 (lower is better)
Translates to: SSLTKSYNGVSEHPVTDPGHIDE*LRGDCK
Trigger: TTTGCAGTCTCCTCTCAGTCATTCATCAATGTGGCC...AGGGTCAGTCACAGGATGTTCTGACACACCATTGTAACTTTTTGTTAGAGATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
3UTR-3UTR TCA 90 bp TCATCTCTAACAAAAAGTTACAATGGTGTGTCAGAACATCCTGTGACTGACCCTAGAACATCCTGTGACTaGCCCTCTGTTTGCTGCTTT +
Preference number: 2 (lower is better)
Translates to: SSLTKSYNGVSEHPVTDPRTSCD*PSVCCF
Trigger: AAAGCAGCAAACAGAGGGTCAGTCACAGGATGTTCT...AGGGTCAGTCACAGGATGTTCTGACACACCATTGTAACTTTTTGTTAGAGATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
3UTR-3UTR TCA 90 bp GCGTTTCTATACATCTTCTGCAATCTAGGTAGAGGTTCCCAAATTTCCATTCTTTTTCCTGGCTTCTTCTaGGCCCTCCAAACTGTTCCA +
Preference number: 2 (lower is better)
Translates to: AFLYIFCNLGRGSQISILFPGFF*ALQTVP
Trigger: TGGAACAGTTTGGAGGGCTCAGAAGAAGCCAGGAAA...AAGAATGGAAATTTGGGAACCTCTACCTAGATTGCAGAAGATGTATAGAAACGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616513.1
3UTR-3UTR TCA 90 bp GCGTTTCTATACATCTTCTGCAATCTAGGTAGAGGTTCCCAAATTTCCATTCTTTTCTTCATCTCCATCTaGGACCACCTCAGCCTGGAT +
Preference number: 2 (lower is better)
Translates to: AFLYIFCNLGRGSQISILFFISI*DHLSLD
Trigger: ATCCAGGCTGAGGTGGTCTCAGATGGAGATGAAGAA...AAGAATGGAAATTTGGGAACCTCTACCTAGATTGCAGAAGATGTATAGAAACGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616513.1
3UTR-3UTR TCA 90 bp ATAGTCTTCTTCACTCTCAGCCAGAAAGCCAGTTATATCTCCTTCGTGAGGAACCCTTCTAGTATCTGTTaGCCGTTGACATTAACATCG +
Preference number: 2 (lower is better)
Translates to: IVFFTLSQKASYISFVRNPSSIC*PLTLTS
Trigger: CGATGTTAATGTCAACGGTCAACAGATACTAGAAGG...GTTCCTCACGAAGGAGATATAACTGGCTTTCTGGCTGAGAGTGAAGAAGACTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679359.1
ENST00000681047.1
3UTR-3UTR GCA 90 bp ACTGCTTGCCCAGCGCTCTTTCAAAATGCCACCTTGCCATCTTACAATGCATTATTGGAGTCTCTTTTCTaGAGACATGGAAAGAATGTG +
Preference number: 2 (lower is better)
Translates to: TACPALFQNATLPSYNALLESLF*RHGKNV
Trigger: CACATTCTTTCCATGTCTGCAGAAAAGAGACTCCAA...TAATGCATTGTAAGATGGCAAGGTGGCATTTTGAAAGAGCGCTGGGCAAGCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
3UTR-3UTR GCA 90 bp ATAGGAATGTCACTTCAAATTCCTGATCAGAGAATCTGCTTACAGATGCACGAGCCTGATCAGAGAATCTaGTTACAGATGCACGAGCAC +
Preference number: 2 (lower is better)
Translates to: IGMSLQIPDQRICLQMHEPDQRI*LQMHEH
Trigger: GTGCTCGTGCATCTGTAAGCAGATTCTCTGATCAGG...CTCGTGCATCTGTAAGCAGATTCTCTGATCAGGAATTTGAAGTGACATTCCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000523764.1
ENST00000650049.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681145.1
3UTR-3UTR GCA 90 bp ACTGCTTGCCCAGCGCTCTTTCAAAATGCCACCTTGCCATCTTACAATGCATTATTCCATTTCTTCCAGTaGCACAGTTGGATTAACCTT +
Preference number: 2 (lower is better)
Translates to: TACPALFQNATLPSYNALFHFFQ*HSWINL
Trigger: AAGGTTAATCCAACTGTGGCACTGGAAGAAATGGAA...TAATGCATTGTAAGATGGCAAGGTGGCATTTTGAAAGAGCGCTGGGCAAGCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
3UTR-3UTR GCA 90 bp CTCCACTGCTGTGGGTTCAAAACAGCAGGCTTGGACCACTCAAAAATGACATCTCACCTCTTGACTGTATaGTTTGAGAACACGATTAAA +
Preference number: 2 (lower is better)
Translates to: LHCCGFKTAGLDHSKMTSHLLTV*FENTIK
Trigger: TTTAATCGTGTTCTCAAAGCATACAGTCAAGAGGTG...AGATGTCATTTTTGAGTGGTCCAAGCCTGCTGTTTTGAACCCACAGCAGTGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
3UTR-3UTR CCA 90 bp GTATACCAAGAATGGAAGCCGAAGGCTAGTCATCCATTTTCTTTTCAACACTTCGGCTCTGATCTGCAATaGATGATTCTTTTCCGGCCT +
Preference number: 2 (lower is better)
Translates to: VYQEWKPKASHPFSFQHFGSDLQ*MILFRP
Trigger: AGGCCGGAAAAGAATCATCCATTGCAGATCAGAGCC...GAAGTGTTGAAAAGAAAATGGATGACTAGCCTTCGGCTTCCATTCTTGGTATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000679359.1
ENST00000681047.1
3UTR-3UTR CCA 90 bp ATAGGAATGTCACTTCAAATTCCTGATCAGAGAATCTGCTTACAGATGCACGAGGGCTCTGATCTGCAATaGATGATTCTTTTCCGGCCT +
Preference number: 2 (lower is better)
Translates to: IGMSLQIPDQRICLQMHEGSDLQ*MILFRP
Trigger: AGGCCGGAAAAGAATCATCCATTGCAGATCAGAGCC...CTCGTGCATCTGTAAGCAGATTCTCTGATCAGGAATTTGAAGTGACATTCCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000650049.2
ENST00000679359.1
ENST00000681047.1
3UTR-3UTR TCA 90 bp ATAGTCTTCTTCACTCTCAGCCAGAAAGCCAGTTATATCTCCTTCGTGAGGAACGTCACTTCAAATTCCTaGTCAGAGAATCTGCTTACA +
Preference number: 2 (lower is better)
Translates to: IVFFTLSQKASYISFVRNVTSNS*SENLLT
Trigger: TGTAAGCAGATTCTCTGATCAGGAATTTGAAGTGAC...GTTCCTCACGAAGGAGATATAACTGGCTTTCTGGCTGAGAGTGAAGAAGACTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000523764.1
ENST00000650049.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681145.1
3UTR-3UTR TCA 90 bp CACTCTCAGCCAGAAAGCCAGTTATATCTCCTTCGTGAGGAACCACAATGTCAAAAAAGCGTATCCCATTaGATCAATGTAAACATCAGG +
Preference number: 2 (lower is better)
Translates to: HSQPESQLYLLREEPQCQKSVSH*INVNIR
Trigger: CCTGATGTTTACATTGATTCAATGGGATACGCTTTT...TTGACATTGTGGTTCCTCACGAAGGAGATATAACTGGCTTTCTGGCTGAGAGTG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000679359.1
ENST00000681047.1
3UTR-3UTR GCA 90 bp GGAATGTCACTTCAAATTCCTGATCAGAGAATCTGCTTACAGATGCACGAGCACTTGGAGTCTCTTTTCTaGAGACATGGAAAGAATGTG +
Preference number: 2 (lower is better)
Translates to: GMSLQIPDQRICLQMHEHLESLF*RHGKNV
Trigger: CACATTCTTTCCATGTCTGCAGAAAAGAGACTCCAA...GTGCTCGTGCATCTGTAAGCAGATTCTCTGATCAGGAATTTGAAGTGACATTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000523764.1
ENST00000650049.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681145.1
3UTR-3UTR GCA 90 bp ATAGTCTTCTTCACTCTCAGCCAGAAAGCCAGTTATATCTCCTTCGTGAGGAACGAATCTGCTTACAGATaGACGAGCACTTTTTCTGAT +
Preference number: 2 (lower is better)
Translates to: IVFFTLSQKASYISFVRNESAYR*TSTFSD
Trigger: ATCAGAAAAAGTGCTCGTGCATCTGTAAGCAGATTC...GTTCCTCACGAAGGAGATATAACTGGCTTTCTGGCTGAGAGTGAAGAAGACTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000523764.1
ENST00000650049.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681145.1
3UTR-3UTR GCA 90 bp ATGATAGGAATGTCACTTCAAATTCCTGATCAGAGAATCTGCTTACAGATGCACCCTGATCAGAGAATCTaGTTACAGATGCACGAGCAC +
Preference number: 2 (lower is better)
Translates to: MIGMSLQIPDQRICLQMHPDQRI*LQMHEH
Trigger: GTGCTCGTGCATCTGTAAGCAGATTCTCTGATCAGG...GTGCATCTGTAAGCAGATTCTCTGATCAGGAATTTGAAGTGACATTCCTATCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000523764.1
ENST00000650049.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681145.1
3UTR-3UTR GCA 90 bp AAATCTCCACTGCTGTGGGTTCAAAACAGCAGGCTTGGACCACTCAAAAATGACCACCTCTTGACTGTATaGTTTGAGAACACGATTAAA +
Preference number: 2 (lower is better)
Translates to: KSPLLWVQNSRLGPLKNDHLLTV*FENTIK
Trigger: TTTAATCGTGTTCTCAAAGCATACAGTCAAGAGGTG...GTCATTTTTGAGTGGTCCAAGCCTGCTGTTTTGAACCCACAGCAGTGGAGATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
3UTR-3UTR GCA 90 bp ACTGCTTGCCCAGCGCTCTTTCAAAATGCCACCTTGCCATCTTACAATGCATTACACCTCTTGACTGTATaGTTTGAGAACACGATTAAA +
Preference number: 2 (lower is better)
Translates to: TACPALFQNATLPSYNALHLLTV*FENTIK
Trigger: TTTAATCGTGTTCTCAAAGCATACAGTCAAGAGGTG...TAATGCATTGTAAGATGGCAAGGTGGCATTTTGAAAGAGCGCTGGGCAAGCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
3UTR-3UTR GCA 90 bp TGCCCAGCGCTCTTTCAAAATGCCACCTTGCCATCTTACAATGCATTATGCTGGCTTGCCATCTTACAATaGATTATGCTGGTAATAGAT +
Preference number: 2 (lower is better)
Translates to: CPALFQNATLPSYNALCWLAILQ*IMLVID
Trigger: ATCTATTACCAGCATAATGCATTGTAAGATGGCAAG...CCAGCATAATGCATTGTAAGATGGCAAGGTGGCATTTTGAAAGAGCGCTGGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
3UTR-3UTR CCA 90 bp GAAAACTTTTTCTTCCTTCACTACATCCTCAGGAATAAGGCAATTGAGTGGATATGTTCCTGCATAGCTTaGCGAGCCTCCAGGTCATAT +
Preference number: 2 (lower is better)
Translates to: ENFFFLHYILRNKAIEWICSCIA*RASRSY
Trigger: ATATGACCTGGAGGCTCGCCAAGCTATGCAGGAACA...TATCCACTCAATTGCCTTATTCCTGAGGATGTAGTGAAGGAAGAAAAAGTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
3UTR-3UTR CCA 90 bp ATGATAGGAATGTCACTTCAAATTCCTGATCAGAGAATCTGCTTACAGATGCACGGCTCTGATCTGCAATaGATGATTCTTTTCCGGCCT +
Preference number: 2 (lower is better)
Translates to: MIGMSLQIPDQRICLQMHGSDLQ*MILFRP
Trigger: AGGCCGGAAAAGAATCATCCATTGCAGATCAGAGCC...GTGCATCTGTAAGCAGATTCTCTGATCAGGAATTTGAAGTGACATTCCTATCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000650049.2
ENST00000679359.1
ENST00000681047.1
3UTR-3UTR TCA 90 bp GAAAACTTTTTCTTCCTTCACTACATCCTCAGGAATAAGGCAATTGAGTGGATAGTCAGTCCCACCTCTTaGCTGTATGCTTTGAGAACA +
Preference number: 2 (lower is better)
Translates to: ENFFFLHYILRNKAIEWIVSPTS*LYALRT
Trigger: TGTTCTCAAAGCATACAGTCAAGAGGTGGGACTGAC...TATCCACTCAATTGCCTTATTCCTGAGGATGTAGTGAAGGAAGAAAAAGTTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
3UTR-3UTR TCA 90 bp TCATCTCTAACAAAAAGTTACAATGGTGTGTCAGAACATCCTGTGACTGACCCTCTGTTTGCTGCTTTTTaGTCTGATGACAGATGGCTT +
Preference number: 2 (lower is better)
Translates to: SSLTKSYNGVSEHPVTDPLFAAF*SDDRWL
Trigger: AAGCCATCTGTCATCAGATCAAAAAGCAGCAAACAG...AGGGTCAGTCACAGGATGTTCTGACACACCATTGTAACTTTTTGTTAGAGATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
3UTR-3UTR TCA 90 bp AAATTCCTGATCAGAGAATCTGCTTACAGATGCACGAGCACTTTTTCTGATTTGCTGATCTGCAATGGATaGTTCTTTTCCGGCCTAAAC +
Preference number: 2 (lower is better)
Translates to: KFLIRESAYRCTSTFSDLLICNG*FFSGLN
Trigger: GTTTAGGCCGGAAAAGAATCATCCATTGCAGATCAG...CAAATCAGAAAAAGTGCTCGTGCATCTGTAAGCAGATTCTCTGATCAGGAATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000650049.2
ENST00000679359.1
ENST00000681047.1
3UTR-3UTR TCA 90 bp ATGATAGGAATGTCACTTCAAATTCCTGATCAGAGAATCTGCTTACAGATGCACGTTATATCTCCTTCGTaGGGAACCACAATGTCAAGC +
Preference number: 2 (lower is better)
Translates to: MIGMSLQIPDQRICLQMHVISPS*GTTMSS
Trigger: GCTTGACATTGTGGTTCCTCACGAAGGAGATATAAC...GTGCATCTGTAAGCAGATTCTCTGATCAGGAATTTGAAGTGACATTCCTATCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000650049.2
ENST00000679359.1
ENST00000681047.1
ENST00000681145.1
3UTR-3UTR TCA 90 bp TCACTTCAAATTCCTGATCAGAGAATCTGCTTACAGATGCACGAGCACTTTTTCCCTTCTAGTATCTGTTaGCCGTTGACATTAACATCG +
Preference number: 2 (lower is better)
Translates to: SLQIPDQRICLQMHEHFFPSSIC*PLTLTS
Trigger: CGATGTTAATGTCAACGGTCAACAGATACTAGAAGG...GAAAAAGTGCTCGTGCATCTGTAAGCAGATTCTCTGATCAGGAATTTGAAGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000679359.1
ENST00000681047.1
3UTR-3UTR GCA 90 bp TCCCACCTCTTGACTGTATGCTTTGAGAACACGATTAAACAAGTCTGTTTAAAACCTGATCAGAGAATCTaGTTACAGATGCACGAGCAC +
Preference number: 2 (lower is better)
Translates to: SHLLTVCFENTIKQVCLKPDQRI*LQMHEH
Trigger: GTGCTCGTGCATCTGTAAGCAGATTCTCTGATCAGG...TTTTAAACAGACTTGTTTAATCGTGTTCTCAAAGCATACAGTCAAGAGGTGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
3UTR-3UTR GCA 90 bp TCATCTCTAACAAAAAGTTACAATGGTGTGTCAGAACATCCTGTGACTGACCCTGTAGCCCACATCCTCTaGTTTTATGGGCTTAATGAT +
Preference number: 2 (lower is better)
Translates to: SSLTKSYNGVSEHPVTDPVAHIL*FYGLND
Trigger: ATCATTAAGCCCATAAAAGCAGAGGATGTGGGCTAC...AGGGTCAGTCACAGGATGTTCTGACACACCATTGTAACTTTTTGTTAGAGATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
3UTR-3UTR GCA 90 bp AAATCTCCACTGCTGTGGGTTCAAAACAGCAGGCTTGGACCACTCAAAAATGACCTTGCCATCTTACAATaGATTATGCTGGTAATAGAT +
Preference number: 2 (lower is better)
Translates to: KSPLLWVQNSRLGPLKNDLAILQ*IMLVID
Trigger: ATCTATTACCAGCATAATGCATTGTAAGATGGCAAG...GTCATTTTTGAGTGGTCCAAGCCTGCTGTTTTGAACCCACAGCAGTGGAGATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
3UTR-3UTR GCA 90 bp TCACTTCAAATTCCTGATCAGAGAATCTGCTTACAGATGCACGAGCACTTTTTCTCGTTCCACATGGTATaGAGACCAATTGTTGCTTCA +
Preference number: 2 (lower is better)
Translates to: SLQIPDQRICLQMHEHFFSFHMV*RPIVAS
Trigger: TGAAGCAACAATTGGTCTGCATACCATGTGGAACGA...GAAAAAGTGCTCGTGCATCTGTAAGCAGATTCTCTGATCAGGAATTTGAAGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000650049.2
ENST00000679359.1
ENST00000681047.1
3UTR-3UTR GCA 90 bp GACAGCATAAACAAAAACAATTTTCACCAGTACCTAGTATGGAAAGGATTGCTGGATAATTGTGCCAGCTaGCATACACTCCACAACTCC +
Preference number: 2 (lower is better)
Translates to: DSINKNNFHQYLVWKGLLDNCAS*HTLHNS
Trigger: GGAGTTGTGGAGTGTATGGCAGCTGGCACAATTATC...CAGCAATCCTTTCCATACTAGGTACTGGTGAAAATTGTTTTTGTTTATGCTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000679359.1
ENST00000681047.1
3UTR-3UTR CCA 90 bp GAAGGTGCATTAAATTTATACCAATTCCTAGCTACTGGCCTAGTAACTAACAATTGTTCCTGCATAGCTTaGCGAGCCTCCAGGTCATAT +
Preference number: 2 (lower is better)
Translates to: EGALNLYQFLATGLVTNNCSCIA*RASRSY
Trigger: ATATGACCTGGAGGCTCGCCAAGCTATGCAGGAACA...ATTGTTAGTTACTAGGCCAGTAGCTAGGAATTGGTATAAATTTAATGCACCTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
3UTR-3UTR CCA 90 bp TCATCTCTAACAAAAAGTTACAATGGTGTGTCAGAACATCCTGTGACTGACCCTGCTTTAATGAGAAACTaGCGTCTTTTCTTGGCACTG +
Preference number: 2 (lower is better)
Translates to: SSLTKSYNGVSEHPVTDPALMRN*RLFLAL
Trigger: CAGTGCCAAGAAAAGACGCCAGTTTCTCATTAAAGC...AGGGTCAGTCACAGGATGTTCTGACACACCATTGTAACTTTTTGTTAGAGATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
3UTR-3UTR TCA 90 bp TCACTTCAAATTCCTGATCAGAGAATCTGCTTACAGATGCACGAGCACTTTTTCTTTAAGCGAAGGAGGTaGCTCAACCATCTTCTTATT +
Preference number: 2 (lower is better)
Translates to: SLQIPDQRICLQMHEHFFFKRRR*LNHLLI
Trigger: AATAAGAAGATGGTTGAGTCACCTCCTTCGCTTAAA...GAAAAAGTGCTCGTGCATCTGTAAGCAGATTCTCTGATCAGGAATTTGAAGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000650049.2
ENST00000679359.1
ENST00000681047.1
3UTR-3UTR TCA 90 bp GACAGCATAAACAAAAACAATTTTCACCAGTACCTAGTATGGAAAGGATTGCTGGAAGTGAGGATACAGTaGATCTTCCACAAGATAGCG +
Preference number: 2 (lower is better)
Translates to: DSINKNNFHQYLVWKGLLEVRIQ*IFHKIA
Trigger: CGCTATCTTGTGGAAGATTCACTGTATCCTCACTTC...CAGCAATCCTTTCCATACTAGGTACTGGTGAAAATTGTTTTTGTTTATGCTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000679359.1
ENST00000681047.1
3UTR-3UTR GCA 90 bp AGAGAATCTGCTTACAGATGCACGAGCACTTTTTCTGATTTGGAGTCTCTTTTCTTGGAGTCTCTTTTCTaGAGACATGGAAAGAATGTG +
Preference number: 2 (lower is better)
Translates to: RESAYRCTSTFSDLESLFLESLF*RHGKNV
Trigger: CACATTCTTTCCATGTCTGCAGAAAAGAGACTCCAA...GAAAAGAGACTCCAAATCAGAAAAAGTGCTCGTGCATCTGTAAGCAGATTCTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000523764.1
ENST00000650049.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681145.1
3UTR-3UTR GCA 90 bp TCACTTCAAATTCCTGATCAGAGAATCTGCTTACAGATGCACGAGCACTTTTTCTTGGAGTCTCTTTTCTaGAGACATGGAAAGAATGTG +
Preference number: 2 (lower is better)
Translates to: SLQIPDQRICLQMHEHFFLESLF*RHGKNV
Trigger: CACATTCTTTCCATGTCTGCAGAAAAGAGACTCCAA...GAAAAAGTGCTCGTGCATCTGTAAGCAGATTCTCTGATCAGGAATTTGAAGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000523764.1
ENST00000650049.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681145.1
3UTR-3UTR GCA 90 bp GTATACCAAGAATGGAAGCCGAAGGCTAGTCATCCATTTTCTTTTCAACACTTCGAATCTGCTTACAGATaGACGAGCACTTTTTCTGAT +
Preference number: 2 (lower is better)
Translates to: VYQEWKPKASHPFSFQHFESAYR*TSTFSD
Trigger: ATCAGAAAAAGTGCTCGTGCATCTGTAAGCAGATTC...GAAGTGTTGAAAAGAAAATGGATGACTAGCCTTCGGCTTCCATTCTTGGTATAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000523764.1
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681145.1
3UTR-3UTR GCA 90 bp AGAGAATCTGCTTACAGATGCACGAGCACTTTTTCTGATTTGGAGTCTCTTTTCGAATCTGCTTACAGATaGACGAGCACTTTTTCTGAT +
Preference number: 2 (lower is better)
Translates to: RESAYRCTSTFSDLESLFESAYR*TSTFSD
Trigger: ATCAGAAAAAGTGCTCGTGCATCTGTAAGCAGATTC...GAAAAGAGACTCCAAATCAGAAAAAGTGCTCGTGCATCTGTAAGCAGATTCTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000523764.1
ENST00000650049.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681145.1
3UTR-3UTR GCA 90 bp ATAGGAATGTCACTTCAAATTCCTGATCAGAGAATCTGCTTACAGATGCACGAGGAATCTGCTTACAGATaGACGAGCACTTTTTCTGAT +
Preference number: 2 (lower is better)
Translates to: IGMSLQIPDQRICLQMHEESAYR*TSTFSD
Trigger: ATCAGAAAAAGTGCTCGTGCATCTGTAAGCAGATTC...CTCGTGCATCTGTAAGCAGATTCTCTGATCAGGAATTTGAAGTGACATTCCTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000523764.1
ENST00000650049.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681145.1
3UTR-3UTR GCA 90 bp AAATTCCTGATCAGAGAATCTGCTTACAGATGCACGAGCACTTTTTCTGATTTGCAAAGCCAGATTCTCTaGAACCTGGTTCACATTCAT +
Preference number: 2 (lower is better)
Translates to: KFLIRESAYRCTSTFSDLQSQIL*NLVHIH
Trigger: ATGAATGTGAACCAGGTTGCAGAGAATCTGGCTTTG...CAAATCAGAAAAAGTGCTCGTGCATCTGTAAGCAGATTCTCTGATCAGGAATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000523764.1
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681145.1
3UTR-3UTR GCA 90 bp GAAGGTGCATTAAATTTATACCAATTCCTAGCTACTGGCCTAGTAACTAACAATACATCAGGAACACACTaGATTAGAGCTTCCCAGCCA +
Preference number: 2 (lower is better)
Translates to: EGALNLYQFLATGLVTNNTSGTH*IRASQP
Trigger: TGGCTGGGAAGCTCTAATGCAGTGTGTTCCTGATGT...ATTGTTAGTTACTAGGCCAGTAGCTAGGAATTGGTATAAATTTAATGCACCTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679359.1
ENST00000681047.1
3UTR-3UTR CCA 90 bp AAATTCCTGATCAGAGAATCTGCTTACAGATGCACGAGCACTTTTTCTGATTTGAATGCTCGTTCCACATaGTATGCAGACCAATTGTTG +
Preference number: 2 (lower is better)
Translates to: KFLIRESAYRCTSTFSDLNARST*YADQLL
Trigger: CAACAATTGGTCTGCATACCATGTGGAACGAGCATT...CAAATCAGAAAAAGTGCTCGTGCATCTGTAAGCAGATTCTCTGATCAGGAATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000650049.2
ENST00000679359.1
ENST00000681047.1
3UTR-3UTR TCA 90 bp TCATCTCTAACAAAAAGTTACAATGGTGTGTCAGAACATCCTGTGACTGACCCTATCTTGATTCTTTCATaGAACAGCTTTGTGACACTG +
Preference number: 2 (lower is better)
Translates to: SSLTKSYNGVSEHPVTDPILILS*NSFVTL
Trigger: CAGTGTCACAAAGCTGTTTCATGAAAGAATCAAGAT...AGGGTCAGTCACAGGATGTTCTGACACACCATTGTAACTTTTTGTTAGAGATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
3UTR-3UTR GCA 90 bp TCCCACCTCTTGACTGTATGCTTTGAGAACACGATTAAACAAGTCTGTTTAAAAGTAGCCCACATCCTCTaGTTTTATGGGCTTAATGAT +
Preference number: 2 (lower is better)
Translates to: SHLLTVCFENTIKQVCLKVAHIL*FYGLND
Trigger: ATCATTAAGCCCATAAAAGCAGAGGATGTGGGCTAC...TTTTAAACAGACTTGTTTAATCGTGTTCTCAAAGCATACAGTCAAGAGGTGGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
3UTR-3UTR GCA 90 bp AGTGAAATATCAACAAAACACAAGTTCAGCTGCCCTCCGCTTGCAAAATTGAATGCAGTAGAAGGAAAGTaGCTTTATTTTTCAGCGCTA +
Preference number: 2 (lower is better)
Translates to: SEISTKHKFSCPPLAKLNAVEGK*LYFSAL
Trigger: TAGCGCTGAAAAATAAAGGCACTTTCCTTCTACTGC...ATTCAATTTTGCAAGCGGAGGGCAGCTGAACTTGTGTTTTGTTGATATTTCACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000649708.2
3UTR-3UTR TCA 90 bp TCCCACCTCTTGACTGTATGCTTTGAGAACACGATTAAACAAGTCTGTTTAAAAGTCACTTCAAATTCCTaGTCAGAGAATCTGCTTACA +
Preference number: 2 (lower is better)
Translates to: SHLLTVCFENTIKQVCLKVTSNS*SENLLT
Trigger: TGTAAGCAGATTCTCTGATCAGGAATTTGAAGTGAC...TTTTAAACAGACTTGTTTAATCGTGTTCTCAAAGCATACAGTCAAGAGGTGGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
3UTR-3UTR TCA 90 bp GACAGCATAAACAAAAACAATTTTCACCAGTACCTAGTATGGAAAGGATTGCTGTTTAAGCGAAGGAGGTaGCTCAACCATCTTCTTATT +
Preference number: 2 (lower is better)
Translates to: DSINKNNFHQYLVWKGLLFKRRR*LNHLLI
Trigger: AATAAGAAGATGGTTGAGTCACCTCCTTCGCTTAAA...CAGCAATCCTTTCCATACTAGGTACTGGTGAAAATTGTTTTTGTTTATGCTGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000679359.1
ENST00000681047.1
3UTR-3UTR GCA 90 bp GAAAACTTTTTCTTCCTTCACTACATCCTCAGGAATAAGGCAATTGAGTGGATATTGGAGTCTCTTTTCTaGAGACATGGAAAGAATGTG +
Preference number: 2 (lower is better)
Translates to: ENFFFLHYILRNKAIEWILESLF*RHGKNV
Trigger: CACATTCTTTCCATGTCTGCAGAAAAGAGACTCCAA...TATCCACTCAATTGCCTTATTCCTGAGGATGTAGTGAAGGAAGAAAAAGTTTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
3UTR-3UTR GCA 90 bp TTTCCACAGATGATAGGAATGTCACTTCAAATTCCTGATCAGAGAATCTGCTTAGAATCTGCTTACAGATaGACGAGCACTTTTTCTGAT +
Preference number: 2 (lower is better)
Translates to: FPQMIGMSLQIPDQRICLESAYR*TSTFSD
Trigger: ATCAGAAAAAGTGCTCGTGCATCTGTAAGCAGATTC...TAAGCAGATTCTCTGATCAGGAATTTGAAGTGACATTCCTATCATCTGTGGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000523764.1
ENST00000650049.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681145.1
3UTR-3UTR GCA 90 bp TCCCACCTCTTGACTGTATGCTTTGAGAACACGATTAAACAAGTCTGTTTAAAATTCCATTTCTTCCAGTaGCACAGTTGGATTAACCTT +
Preference number: 2 (lower is better)
Translates to: SHLLTVCFENTIKQVCLKFHFFQ*HSWINL
Trigger: AAGGTTAATCCAACTGTGGCACTGGAAGAAATGGAA...TTTTAAACAGACTTGTTTAATCGTGTTCTCAAAGCATACAGTCAAGAGGTGGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
3UTR-3UTR GCA 90 bp GACAGCATAAACAAAAACAATTTTCACCAGTACCTAGTATGGAAAGGATTGCTGTTCCATTTCTTCCAGTaGCACAGTTGGATTAACCTT +
Preference number: 2 (lower is better)
Translates to: DSINKNNFHQYLVWKGLLFHFFQ*HSWINL
Trigger: AAGGTTAATCCAACTGTGGCACTGGAAGAAATGGAA...CAGCAATCCTTTCCATACTAGGTACTGGTGAAAATTGTTTTTGTTTATGCTGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
3UTR-3UTR GCA 90 bp TCATCTCTAACAAAAAGTTACAATGGTGTGTCAGAACATCCTGTGACTGACCCTCTTGCCATCTTACAATaGATTATGCTGGTAATAGAT +
Preference number: 2 (lower is better)
Translates to: SSLTKSYNGVSEHPVTDPLAILQ*IMLVID
Trigger: ATCTATTACCAGCATAATGCATTGTAAGATGGCAAG...AGGGTCAGTCACAGGATGTTCTGACACACCATTGTAACTTTTTGTTAGAGATGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
3UTR-3UTR CCA 90 bp GAAGGTGCATTAAATTTATACCAATTCCTAGCTACTGGCCTAGTAACTAACAATAATGCTCGTTCCACATaGTATGCAGACCAATTGTTG +
Preference number: 2 (lower is better)
Translates to: EGALNLYQFLATGLVTNNNARST*YADQLL
Trigger: CAACAATTGGTCTGCATACCATGTGGAACGAGCATT...ATTGTTAGTTACTAGGCCAGTAGCTAGGAATTGGTATAAATTTAATGCACCTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679359.1
ENST00000681047.1
3UTR-3UTR TCA 90 bp GAAAACTTTTTCTTCCTTCACTACATCCTCAGGAATAAGGCAATTGAGTGGATAATCTTGATTCTTTCATaGAACAGCTTTGTGACACTG +
Preference number: 2 (lower is better)
Translates to: ENFFFLHYILRNKAIEWIILILS*NSFVTL
Trigger: CAGTGTCACAAAGCTGTTTCATGAAAGAATCAAGAT...TATCCACTCAATTGCCTTATTCCTGAGGATGTAGTGAAGGAAGAAAAAGTTTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
3UTR-3UTR TCA 90 bp GAAAACTTTTTCTTCCTTCACTACATCCTCAGGAATAAGGCAATTGAGTGGATATGGACCACTCAAAAATaGCATCTGAGAGGAATTAAT +
Preference number: 2 (lower is better)
Translates to: ENFFFLHYILRNKAIEWIWTTQK*HLRGIN
Trigger: ATTAATTCCTCTCAGATGTCATTTTTGAGTGGTCCA...TATCCACTCAATTGCCTTATTCCTGAGGATGTAGTGAAGGAAGAAAAAGTTTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
3UTR-3UTR GCA 90 bp GAAGGTGCATTAAATTTATACCAATTCCTAGCTACTGGCCTAGTAACTAACAATGAATCTGCTTACAGATaGACGAGCACTTTTTCTGAT +
Preference number: 2 (lower is better)
Translates to: EGALNLYQFLATGLVTNNESAYR*TSTFSD
Trigger: ATCAGAAAAAGTGCTCGTGCATCTGTAAGCAGATTC...ATTGTTAGTTACTAGGCCAGTAGCTAGGAATTGGTATAAATTTAATGCACCTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
3UTR-3UTR GCA 90 bp GAAAACTTTTTCTTCCTTCACTACATCCTCAGGAATAAGGCAATTGAGTGGATACACCTCTTGACTGTATaGTTTGAGAACACGATTAAA +
Preference number: 2 (lower is better)
Translates to: ENFFFLHYILRNKAIEWIHLLTV*FENTIK
Trigger: TTTAATCGTGTTCTCAAAGCATACAGTCAAGAGGTG...TATCCACTCAATTGCCTTATTCCTGAGGATGTAGTGAAGGAAGAAAAAGTTTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
3UTR-3UTR CCA 90 bp GAAGGTGCATTAAATTTATACCAATTCCTAGCTACTGGCCTAGTAACTAACAATCTGCACATCACAAGGTaGATAAACAATGTTAGTGCA +
Preference number: 2 (lower is better)
Translates to: EGALNLYQFLATGLVTNNLHITR*INNVSA
Trigger: TGCACTAACATTGTTTATCCACCTTGTGATGTGCAG...ATTGTTAGTTACTAGGCCAGTAGCTAGGAATTGGTATAAATTTAATGCACCTTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679359.1
ENST00000681047.1
3UTR-3UTR GCA 90 bp TCCCACCTCTTGACTGTATGCTTTGAGAACACGATTAAACAAGTCTGTTTAAAACTTGCCATCTTACAATaGATTATGCTGGTAATAGAT +
Preference number: 2 (lower is better)
Translates to: SHLLTVCFENTIKQVCLKLAILQ*IMLVID
Trigger: ATCTATTACCAGCATAATGCATTGTAAGATGGCAAG...TTTTAAACAGACTTGTTTAATCGTGTTCTCAAAGCATACAGTCAAGAGGTGGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
3UTR-3UTR GCA 90 bp GAAAACTTTTTCTTCCTTCACTACATCCTCAGGAATAAGGCAATTGAGTGGATATTCAAAATGCCACCTTaGCATCTTACAATGCATTAT +
Preference number: 2 (lower is better)
Translates to: ENFFFLHYILRNKAIEWIFKMPP*HLTMHY
Trigger: ATAATGCATTGTAAGATGGCAAGGTGGCATTTTGAA...TATCCACTCAATTGCCTTATTCCTGAGGATGTAGTGAAGGAAGAAAAAGTTTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
3UTR GCA 72 bp GGAGCAGCTGGGACACAGGGTACCAAGTCCCTAGGCTaGACACAGCACAGGGCCCCTGCACCTGGCCCACAA +
Preference number: 3 (lower is better)
Translates to: GAAGTQGTKSLG*TQHRAPAPGPQ
Trigger: TTGTGGGCCAGGTGCAGGGGCCCTGTGCTGTGTGCAGCCTAGGGACTTGGTACCCTGTGTCCCAGCTGCTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616513.1
3UTR CCA 72 bp CCCTGGCAGAGGTTCTCCATGAGGGCCCTGCCCCGGTaGCAAACTTTTGCCTGGGCATCCAGGCGTTTCTAT +
Preference number: 3 (lower is better)
Translates to: PWQRFSMRALPR*QTFAWASRRFY
Trigger: ATAGAAACGCCTGGATGCCCAGGCAAAAGTTTGCCACCGGGGCAGGGCCCTCATGGAGAACCTCTGCCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616513.1
3UTR CCA 72 bp GGCACACGGTGCAAGCTGTCAGTGGATCTACCACTCTaGGGTATGGAGGACGGTGGCCCTCTTCTCGCAGCT +
Preference number: 3 (lower is better)
Translates to: GTRCKLSVDLPL*GMEDGGPLLAA
Trigger: AGCTGCGAGAAGAGGGCCACCGTCCTCCATACCCCAGAGTGGTAGATCCACTGACAGCTTGCACCGTGTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616513.1
3UTR TCA 72 bp ACAGCCTCCCTCCTGGCTGCTTTCATGGGCCGGCGTTaGGTGTCTGAGGTTTTTCCAGGCACACGGTGCAAG +
Preference number: 3 (lower is better)
Translates to: TASLLAAFMGRR*VSEVFPGTRCK
Trigger: CTTGCACCGTGTGCCTGGAAAAACCTCAGACACTCAACGCCGGCCCATGAAAGCAGCCAGGAGGGAGGCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616513.1
3UTR CCA 72 bp CTTTCACCCTCTGAAGCCACAGCACTAGCTCTGCATTaGCCCCTTTCAGCCACGGCTGGAGCAGCTGGGACA +
Preference number: 3 (lower is better)
Translates to: LSPSEATALALH*PLSATAGAAGT
Trigger: TGTCCCAGCTGCTCCAGCCGTGGCTGAAAGGGGCCAATGCAGAGCTAGTGCTGTGGCTTCAGAGGGTGAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616513.1
3UTR GCA 72 bp TTCCTCCTGGGCCTCCAGGCCTGCCATGAGAGAGGCTaGCATGAAGGTCTCCGACATTGCCTGGAGACATTT +
Preference number: 3 (lower is better)
Translates to: FLLGLQACHERG*HEGLRHCLETF
Trigger: AAATGTCTCCAGGCAATGTCGGAGACCTTCATGGCAGCCTCTCTCATGGCAGGCCTGGAGGCCCAGGAGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616513.1
3UTR GCA 72 bp GTTCTCCATGAGGGCCCTGCCCCGGTGGCAAACTTTTaGCTGGGCATCCAGGCGTTTCTATACATCTTCTGC +
Preference number: 3 (lower is better)
Translates to: VLHEGPAPVANF*LGIQAFLYIFC
Trigger: GCAGAAGATGTATAGAAACGCCTGGATGCCCAGGCAAAAGTTTGCCACCGGGGCAGGGCCCTCATGGAGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616513.1
3UTR GCA 72 bp AAGCAAGAGGTGGGTTCCCATGGTCTTGAGCAGCTCTaGCCCTGTAGATTTGCAGGGTACAGCCTCCCTCCT +
Preference number: 3 (lower is better)
Translates to: KQEVGSHGLEQL*PCRFAGYSLPP
Trigger: AGGAGGGAGGCTGTACCCTGCAAATCTACAGGGGCAGAGCTGCTCAAGACCATGGGAACCCACCTCTTGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616513.1
3UTR CCA 72 bp ATTTGCAGGGTACAGCCTCCCTCCTGGCTGCTTTCATaGGCCGGCGTTGAGTGTCTGAGGTTTTTCCAGGCA +
Preference number: 3 (lower is better)
Translates to: ICRVQPPSWLLS*AGVECLRFFQA
Trigger: TGCCTGGAAAAACCTCAGACACTCAACGCCGGCCCATGAAAGCAGCCAGGAGGGAGGCTGTACCCTGCAAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616513.1
3UTR TCA 72 bp CATGTGAAGCTACCATGGCTTGGGGCTTTCACCCTCTaGAGCCACAGCACTAGCTCTGCATTGGCCCCTTTC +
Preference number: 3 (lower is better)
Translates to: HVKLPWLGAFTL*SHSTSSALAPF
Trigger: GAAAGGGGCCAATGCAGAGCTAGTGCTGTGGCTTCAGAGGGTGAAAGCCCCAAGCCATGGTAGCTTCACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616513.1
3UTR CCA 72 bp TCCATGAGGGCCCTGCCCCGGTGGCAAACTTTTGCCTaGGCATCCAGGCGTTTCTATACATCTTCTGCAATC +
Preference number: 3 (lower is better)
Translates to: SMRALPRWQTFA*ASRRFYTSSAI
Trigger: GATTGCAGAAGATGTATAGAAACGCCTGGATGCCCAGGCAAAAGTTTGCCACCGGGGCAGGGCCCTCATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616513.1
3UTR CCA 72 bp CCAGGTCTCACATCCAGGTCATGCTTAAGCAAGAGGTaGGTTCCCATGGTCTTGAGCAGCTCTGCCCCTGTA +
Preference number: 3 (lower is better)
Translates to: PGLTSRSCLSKR*VPMVLSSSAPV
Trigger: TACAGGGGCAGAGCTGCTCAAGACCATGGGAACCCACCTCTTGCTTAAGCATGACCTGGATGTGAGACCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616513.1
3UTR CCA 72 bp GGAAAGACCGGCCCCCATGATTCAATTACCTTCCCCTaGGTCCCTTCCACAACACATGGGAATTCTGGGAGA +
Preference number: 3 (lower is better)
Translates to: GKTGPHDSITFP*VPSTTHGNSGR
Trigger: TCTCCCAGAATTCCCATGTGTTGTGGAAGGGACCCAGGGGAAGGTAATTGAATCATGGGGGCCGGTCTTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616513.1
3UTR CCA 72 bp CACGGCAGGAGGTGTAAGGCACTTCTTACAGGGCAGTaGGCAAGAGAAAAACGAGGAAGCAGCAAAAGCGGA +
Preference number: 3 (lower is better)
Translates to: HGRRCKALLTGQ*AREKRGSSKSG
Trigger: TCCGCTTTTGCTGCTTCCTCGTTTTTCTCTTGCCCACTGCCCTGTAAGAAGTGCCTTACACCTCCTGCCGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616513.1
3UTR-3UTR CAA 90 bp CCATATCATTCTGCCCTGGCCCCTCCAAATCTCACGTCATCACATTTCAAAACCAGCACTAGCTCTGCATaGGCCCCTTTCAGCCACGGC +
Preference number: 3 (lower is better)
Translates to: PYHSALAPPNLTSSHFKTSTSSA*APFSHG
Trigger: GCCGTGGCTGAAAGGGGCCAATGCAGAGCTAGTGCT...GGTTTTGAAATGTGATGACGTGAGATTTGGAGGGGCCAGGGCAGAATGATATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000616513.1
3UTR GCA 72 bp TGGCTTCTTCTGAGCCCTCCAAACTGTTCCAGCCTCTaGCTGTTGCCCAGTTCCAAAGTCGCTTCCACATTT +
Preference number: 3 (lower is better)
Translates to: WLLLSPPNCSSL*LLPSSKVASTF
Trigger: AAATGTGGAAGCGACTTTGGAACTGGGCAACAGGCAGAGGCTGGAACAGTTTGGAGGGCTCAGAAGAAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616513.1
3UTR-3UTR CAA 90 bp TGCCCAGCGCTCTTTCAAAATGCCACCTTGCCATCTTACAATGCATTATGCTGGCAGGCAGGTCTGACCTaGAGGAAGACTGGTAGCCCA +
Preference number: 3 (lower is better)
Translates to: CPALFQNATLPSYNALCWQAGLT*RKTGSP
Trigger: TGGGCTACCAGTCTTCCTCAAGGTCAGACCTGCCTG...CCAGCATAATGCATTGTAAGATGGCAAGGTGGCATTTTGAAAGAGCGCTGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
3UTR-3UTR CAA 90 bp CCCAGTAGGGACTCTGTGTGGGGGCTCCAACCCCACATTTCCCTTCTGCACTGCTTCTTTTCTACTGCATaGTCAGGCTGCAAATTTTCT +
Preference number: 3 (lower is better)
Translates to: PSRDSVWGLQPHISLLHCFFSTA*SGCKFS
Trigger: AGAAAATTTGCAGCCTGACAATGCAGTAGAAAAGAA...GCAGTGCAGAAGGGAAATGTGGGGTTGGAGCCCCCACACAGAGTCCCTACTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000616513.1
3UTR CCA 72 bp CTTCCCCTGGGTCCCTTCCACAACACATGGGAATTCTaGGAGACACAATTCAAACTGAGATTTGGGTGGGGA +
Preference number: 3 (lower is better)
Translates to: LPLGPFHNTWEF*ETQFKLRFGWG
Trigger: TCCCCACCCAAATCTCAGTTTGAATTGTGTCTCCCAGAATTCCCATGTGTTGTGGAAGGGACCCAGGGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616513.1
3UTR CCA 72 bp ATGAGAGAGGCTGCCATGAAGGTCTCCGACATTGCCTaGAGACATTTTCCCCCATGGTCTTCAGGATTAACA +
Preference number: 3 (lower is better)
Translates to: MREAAMKVSDIA*RHFPPWSSGLT
Trigger: TGTTAATCCTGAAGACCATGGGGGAAAATGTCTCCAGGCAATGTCGGAGACCTTCATGGCAGCCTCTCTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616513.1
3UTR-3UTR CAA 90 bp CTCCACTGCTGTGGGTTCAAAACAGCAGGCTTGGACCACTCAAAAATGACATCTCCAGCTCCTCTATTATaGTGGGAACTGCCAAAGACC +
Preference number: 3 (lower is better)
Translates to: LHCCGFKTAGLDHSKMTSPAPLL*WELPKT
Trigger: GGTCTTTGGCAGTTCCCACAATAATAGAGGAGCTGG...AGATGTCATTTTTGAGTGGTCCAAGCCTGCTGTTTTGAACCCACAGCAGTGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
3UTR-3UTR CAA 90 bp GCCCAGCGCTCTTTCAAAATGCCACCTTGCCATCTTACAATGCATTATGCTGGTCCAGCTCCTCTATTATaGTGGGAACTGCCAAAGACC +
Preference number: 3 (lower is better)
Translates to: AQRSFKMPPCHLTMHYAGPAPLL*WELPKT
Trigger: GGTCTTTGGCAGTTCCCACAATAATAGAGGAGCTGG...ACCAGCATAATGCATTGTAAGATGGCAAGGTGGCATTTTGAAAGAGCGCTGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
3UTR-3UTR CAA 90 bp TGCCCAGCGCTCTTTCAAAATGCCACCTTGCCATCTTACAATGCATTATGCTGGTGGATATGGAAGCACTaGTACCTGATGAGCTGCTGC +
Preference number: 3 (lower is better)
Translates to: CPALFQNATLPSYNALCWWIWKH*YLMSCC
Trigger: GCAGCAGCTCATCAGGTACAAGTGCTTCCATATCCA...CCAGCATAATGCATTGTAAGATGGCAAGGTGGCATTTTGAAAGAGCGCTGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
3UTR-3UTR CAA 90 bp GAAAGGATTGCTGGCAGCACCTTGGCCTCTACCACCCTACACACACCTATAAAGAGACAGCCTTCTCAGTaGGTTTACCCTAAGTTCATC +
Preference number: 3 (lower is better)
Translates to: ERIAGSTLASTTLHTPIKRQPSQ*VYPKFI
Trigger: GATGAACTTAGGGTAAACCAACTGAGAAGGCTGTCT...CTTTATAGGTGTGTGTAGGGTGGTAGAGGCCAAGGTGCTGCCAGCAATCCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679359.1
ENST00000681047.1
3UTR-3UTR CAA 90 bp TGCCCAGCGCTCTTTCAAAATGCCACCTTGCCATCTTACAATGCATTATGCTGGTTTCTTCTGCCTCACTaGCAGAAACCTCATGAGCTG +
Preference number: 3 (lower is better)
Translates to: CPALFQNATLPSYNALCWFLLPH*QKPHEL
Trigger: CAGCTCATGAGGTTTCTGCAAGTGAGGCAGAAGAAA...CCAGCATAATGCATTGTAAGATGGCAAGGTGGCATTTTGAAAGAGCGCTGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
3UTR-3UTR CAA 90 bp AGGTGTGAGACACCGCACCCAGCCCTTAACTGTCGTAATTTTCAAAGTAGTTTCCCAGCTCCTCTATTATaGTGGGAACTGCCAAAGACC +
Preference number: 3 (lower is better)
Translates to: RCETPHPALNCRNFQSSFPAPLL*WELPKT
Trigger: GGTCTTTGGCAGTTCCCACAATAATAGAGGAGCTGG...GAAACTACTTTGAAAATTACGACAGTTAAGGGCTGGGTGCGGTGTCTCACACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
3UTR-3UTR CAA 90 bp ACTGCTTGCCCAGCGCTCTTTCAAAATGCCACCTTGCCATCTTACAATGCATTATGGATATGGAAGCACTaGTACCTGATGAGCTGCTGC +
Preference number: 3 (lower is better)
Translates to: TACPALFQNATLPSYNALWIWKH*YLMSCC
Trigger: GCAGCAGCTCATCAGGTACAAGTGCTTCCATATCCA...TAATGCATTGTAAGATGGCAAGGTGGCATTTTGAAAGAGCGCTGGGCAAGCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
3UTR-3UTR CAA 90 bp TCCCAACAAGTTCTTCATCTCCATCTGAGACCACCTCAGCCTGGATTTCGTTGTGTCGCTTCCACATTTTaGGGTATCTCTTCAGCAGCA +
Preference number: 3 (lower is better)
Translates to: SQQVLHLHLRPPQPGFRCVASTF*GISSAA
Trigger: TGCTGCTGAAGAGATACCCAAAAATGTGGAAGCGAC...ACAACGAAATCCAGGCTGAGGTGGTCTCAGATGGAGATGAAGAACTTGTTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616513.1
3UTR-3UTR CAA 90 bp AGGTGTGAGACACCGCACCCAGCCCTTAACTGTCGTAATTTTCAAAGTAGTTTCTTTCTTCTGCCTCACTaGCAGAAACCTCATGAGCTG +
Preference number: 3 (lower is better)
Translates to: RCETPHPALNCRNFQSSFFLLPH*QKPHEL
Trigger: CAGCTCATGAGGTTTCTGCAAGTGAGGCAGAAGAAA...GAAACTACTTTGAAAATTACGACAGTTAAGGGCTGGGTGCGGTGTCTCACACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
3UTR TCA 72 bp CTTTCTCCAGTTCCCAACAAGTTCTTCATCTCCATCTaGGACCACCTCAGCCTGGATTTCGTTGTCCATATC +
Preference number: 3 (lower is better)
Translates to: LSPVPNKFFISI*DHLSLDFVVHI
Trigger: GATATGGACAACGAAATCCAGGCTGAGGTGGTCTCAGATGGAGATGAAGAACTTGTTGGGAACTGGAGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616513.1
3UTR CCA 72 bp AAGGTCTCCGACATTGCCTGGAGACATTTTCCCCCATaGTCTTCAGGATTAACATTAGGCTCCTTGCTACTT +
Preference number: 3 (lower is better)
Translates to: KVSDIAWRHFPP*SSGLTLGSLLL
Trigger: AAGTAGCAAGGAGCCTAATGTTAATCCTGAAGACCATGGGGGAAAATGTCTCCAGGCAATGTCGGAGACCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616513.1
3UTR CCA 72 bp TATTGGGTAAGTACAGCTGTTCCAAATGGGAGAAATTaGCCAAAACAAGGGGGTTACAGGGCCCATGCAAGT +
Preference number: 3 (lower is better)
Translates to: YWVSTAVPNGRN*PKQGGYRAHAS
Trigger: ACTTGCATGGGCCCTGTAACCCCCTTGTTTTGGCCAATTTCTCCCATTTGGAACAGCTGTACTTACCCAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616513.1
3UTR-3UTR CAA 90 bp GACAGCATAAACAAAAACAATTTTCACCAGTACCTAGTATGGAAAGGATTGCTGCTGCTCGGTGCATCTTaGCCTCTTCCAGGCTCATGG +
Preference number: 3 (lower is better)
Translates to: DSINKNNFHQYLVWKGLLLLGAS*PLPGSW
Trigger: CCATGAGCCTGGAAGAGGCAAAGATGCACCGAGCAG...CAGCAATCCTTTCCATACTAGGTACTGGTGAAAATTGTTTTTGTTTATGCTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
3UTR-3UTR CAA 90 bp GACAGCATAAACAAAAACAATTTTCACCAGTACCTAGTATGGAAAGGATTGCTGCAGGCAGGTCTGACCTaGAGGAAGACTGGTAGCCCA +
Preference number: 3 (lower is better)
Translates to: DSINKNNFHQYLVWKGLLQAGLT*RKTGSP
Trigger: TGGGCTACCAGTCTTCCTCAAGGTCAGACCTGCCTG...CAGCAATCCTTTCCATACTAGGTACTGGTGAAAATTGTTTTTGTTTATGCTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
3UTR-3UTR CAA 90 bp ATAATTGTGCCAGCTGCCATACACTCCACAACTCCAATCCCAAAATGCTCGTTCAGACAGCCTTCTCAGTaGGTTTACCCTAAGTTCATC +
Preference number: 3 (lower is better)
Translates to: IIVPAAIHSTTPIPKCSFRQPSQ*VYPKFI
Trigger: GATGAACTTAGGGTAAACCAACTGAGAAGGCTGTCT...GAACGAGCATTTTGGGATTGGAGTTGTGGAGTGTATGGCAGCTGGCACAATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000650049.2
ENST00000679359.1
ENST00000681047.1
3UTR CCA 72 bp AAAAGAGATTTAATTGGACTTACAGTTCCATATGGCTaGGGAGACCTCAGAATCACGGCAGGAGGTGTAAGG +
Preference number: 3 (lower is better)
Translates to: KRDLIGLTVPYG*GDLRITAGGVR
Trigger: CCTTACACCTCCTGCCGTGATTCTGAGGTCTCCCCAGCCATATGGAACTGTAAGTCCAATTAAATCTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616513.1
3UTR-3UTR CAA 90 bp TGCCCAGCGCTCTTTCAAAATGCCACCTTGCCATCTTACAATGCATTATGCTGGTCAAGGGGTAGTTTTTaGGCAAATCCACTAGTTCTT +
Preference number: 3 (lower is better)
Translates to: CPALFQNATLPSYNALCWSRGSF*ANPLVL
Trigger: AAGAACTAGTGGATTTGCCAAAAAACTACCCCTTGA...CCAGCATAATGCATTGTAAGATGGCAAGGTGGCATTTTGAAAGAGCGCTGGGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
3UTR-3UTR CAA 90 bp TCATCTCTAACAAAAAGTTACAATGGTGTGTCAGAACATCCTGTGACTGACCCTTGGATATGGAAGCACTaGTACCTGATGAGCTGCTGC +
Preference number: 3 (lower is better)
Translates to: SSLTKSYNGVSEHPVTDPWIWKH*YLMSCC
Trigger: GCAGCAGCTCATCAGGTACAAGTGCTTCCATATCCA...AGGGTCAGTCACAGGATGTTCTGACACACCATTGTAACTTTTTGTTAGAGATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
3UTR-3UTR CAA 90 bp GAAGGTGCATTAAATTTATACCAATTCCTAGCTACTGGCCTAGTAACTAACAATCAGGCAGGTCTGACCTaGAGGAAGACTGGTAGCCCA +
Preference number: 3 (lower is better)
Translates to: EGALNLYQFLATGLVTNNQAGLT*RKTGSP
Trigger: TGGGCTACCAGTCTTCCTCAAGGTCAGACCTGCCTG...ATTGTTAGTTACTAGGCCAGTAGCTAGGAATTGGTATAAATTTAATGCACCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
3UTR CCA 72 bp ACAAGTTCTTCATCTCCATCTGAGACCACCTCAGCCTaGATTTCGTTGTCCATATCACTATCCGCATTTTGT +
Preference number: 3 (lower is better)
Translates to: TSSSSPSETTSA*ISLSISLSAFC
Trigger: ACAAAATGCGGATAGTGATATGGACAACGAAATCCAGGCTGAGGTGGTCTCAGATGGAGATGAAGAACTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616513.1
3UTR CCA 72 bp TTCAATTACCTTCCCCTGGGTCCCTTCCACAACACATaGGAATTCTGGGAGACACAATTCAAACTGAGATTT +
Preference number: 3 (lower is better)
Translates to: FNYLPLGPFHNT*EFWETQFKLRF
Trigger: AAATCTCAGTTTGAATTGTGTCTCCCAGAATTCCCATGTGTTGTGGAAGGGACCCAGGGGAAGGTAATTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616513.1
3UTR-3UTR CAA 90 bp ATAATTGTGCCAGCTGCCATACACTCCACAACTCCAATCCCAAAATGCTCGTTCCTAAGTTCATCATCTTaGTTACGACAACCTCCAATG +
Preference number: 3 (lower is better)
Translates to: IIVPAAIHSTTPIPKCSFLSSSS*LRQPPM
Trigger: CATTGGAGGTTGTCGTAACAAAGATGATGAACTTAG...GAACGAGCATTTTGGGATTGGAGTTGTGGAGTGTATGGCAGCTGGCACAATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000650049.2
ENST00000679359.1
ENST00000681047.1
3UTR-3UTR CAA 90 bp GGAATGTCACTTCAAATTCCTGATCAGAGAATCTGCTTACAGATGCACGAGCACAACATAGCTTCCAACTaGGCAACCCCCTATATACTT +
Preference number: 3 (lower is better)
Translates to: GMSLQIPDQRICLQMHEHNIASN*ATPYIL
Trigger: AAGTATATAGGGGGTTGCCAAGTTGGAAGCTATGTT...GTGCTCGTGCATCTGTAAGCAGATTCTCTGATCAGGAATTTGAAGTGACATTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000679359.1
ENST00000681047.1
3UTR GCA 72 bp TGCACGAGCACTTTTTCTGATTTGGAGTCTCTTTTCTaGAGACATGGAAAGAATGTGAGCGATAGTTTCAGC +
Preference number: 3 (lower is better)
Translates to: CTSTFSDLESLF*RHGKNVSDSFS
Trigger: GCTGAAACTATCGCTCACATTCTTTCCATGTCTGCAGAAAAGAGACTCCAAATCAGAAAAAGTGCTCGTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000523764.1
ENST00000650049.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681145.1
3UTR GCA 72 bp TTTTGCCTGGGCATCCAGGCGTTTCTATACATCTTCTaGAATCTAGGTAGAGGTTCCCAAATTTCCATTCTT +
Preference number: 3 (lower is better)
Translates to: FCLGIQAFLYIF*NLGRGSQISIL
Trigger: AAGAATGGAAATTTGGGAACCTCTACCTAGATTGCAGAAGATGTATAGAAACGCCTGGATGCCCAGGCAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616513.1
3UTR-3UTR CAA 90 bp GGAATGTCACTTCAAATTCCTGATCAGAGAATCTGCTTACAGATGCACGAGCACTCAAGGGGTAGTTTTTaGGCAAATCCACTAGTTCTT +
Preference number: 3 (lower is better)
Translates to: GMSLQIPDQRICLQMHEHSRGSF*ANPLVL
Trigger: AAGAACTAGTGGATTTGCCAAAAAACTACCCCTTGA...GTGCTCGTGCATCTGTAAGCAGATTCTCTGATCAGGAATTTGAAGTGACATTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000523764.1
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681145.1
3UTR-3UTR CAA 90 bp GACAGCATAAACAAAAACAATTTTCACCAGTACCTAGTATGGAAAGGATTGCTGCCAGCTCCTCTATTATaGTGGGAACTGCCAAAGACC +
Preference number: 3 (lower is better)
Translates to: DSINKNNFHQYLVWKGLLPAPLL*WELPKT
Trigger: GGTCTTTGGCAGTTCCCACAATAATAGAGGAGCTGG...CAGCAATCCTTTCCATACTAGGTACTGGTGAAAATTGTTTTTGTTTATGCTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
3UTR-3UTR CAA 90 bp TCCCACCTCTTGACTGTATGCTTTGAGAACACGATTAAACAAGTCTGTTTAAAATGGATATGGAAGCACTaGTACCTGATGAGCTGCTGC +
Preference number: 3 (lower is better)
Translates to: SHLLTVCFENTIKQVCLKWIWKH*YLMSCC
Trigger: GCAGCAGCTCATCAGGTACAAGTGCTTCCATATCCA...TTTTAAACAGACTTGTTTAATCGTGTTCTCAAAGCATACAGTCAAGAGGTGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
3UTR-3UTR CAA 90 bp TCATCTCTAACAAAAAGTTACAATGGTGTGTCAGAACATCCTGTGACTGACCCTAGACAGCCTTCTCAGTaGGTTTACCCTAAGTTCATC +
Preference number: 3 (lower is better)
Translates to: SSLTKSYNGVSEHPVTDPRQPSQ*VYPKFI
Trigger: GATGAACTTAGGGTAAACCAACTGAGAAGGCTGTCT...AGGGTCAGTCACAGGATGTTCTGACACACCATTGTAACTTTTTGTTAGAGATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000679359.1
ENST00000681047.1
3UTR-3UTR CAA 90 bp TCCCACCTCTTGACTGTATGCTTTGAGAACACGATTAAACAAGTCTGTTTAAAATTTCTTCTGCCTCACTaGCAGAAACCTCATGAGCTG +
Preference number: 3 (lower is better)
Translates to: SHLLTVCFENTIKQVCLKFLLPH*QKPHEL
Trigger: CAGCTCATGAGGTTTCTGCAAGTGAGGCAGAAGAAA...TTTTAAACAGACTTGTTTAATCGTGTTCTCAAAGCATACAGTCAAGAGGTGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
3UTR-3UTR CAA 90 bp GACAGCATAAACAAAAACAATTTTCACCAGTACCTAGTATGGAAAGGATTGCTGTTTCTTCTGCCTCACTaGCAGAAACCTCATGAGCTG +
Preference number: 3 (lower is better)
Translates to: DSINKNNFHQYLVWKGLLFLLPH*QKPHEL
Trigger: CAGCTCATGAGGTTTCTGCAAGTGAGGCAGAAGAAA...CAGCAATCCTTTCCATACTAGGTACTGGTGAAAATTGTTTTTGTTTATGCTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
3UTR-3UTR CAA 90 bp GAAAACTTTTTCTTCCTTCACTACATCCTCAGGAATAAGGCAATTGAGTGGATATTTCTTCTGCCTCACTaGCAGAAACCTCATGAGCTG +
Preference number: 3 (lower is better)
Translates to: ENFFFLHYILRNKAIEWIFLLPH*QKPHEL
Trigger: CAGCTCATGAGGTTTCTGCAAGTGAGGCAGAAGAAA...TATCCACTCAATTGCCTTATTCCTGAGGATGTAGTGAAGGAAGAAAAAGTTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
3UTR-3UTR CAA 90 bp TCATCTCTAACAAAAAGTTACAATGGTGTGTCAGAACATCCTGTGACTGACCCTTCAAGGGGTAGTTTTTaGGCAAATCCACTAGTTCTT +
Preference number: 3 (lower is better)
Translates to: SSLTKSYNGVSEHPVTDPSRGSF*ANPLVL
Trigger: AAGAACTAGTGGATTTGCCAAAAAACTACCCCTTGA...AGGGTCAGTCACAGGATGTTCTGACACACCATTGTAACTTTTTGTTAGAGATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
3UTR-3UTR CAA 90 bp TCACTTCAAATTCCTGATCAGAGAATCTGCTTACAGATGCACGAGCACTTTTTCCTAAGTTCATCATCTTaGTTACGACAACCTCCAATG +
Preference number: 3 (lower is better)
Translates to: SLQIPDQRICLQMHEHFFLSSSS*LRQPPM
Trigger: CATTGGAGGTTGTCGTAACAAAGATGATGAACTTAG...GAAAAAGTGCTCGTGCATCTGTAAGCAGATTCTCTGATCAGGAATTTGAAGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000650049.2
ENST00000679359.1
ENST00000681047.1
3UTR TCA 72 bp TTTTCCACAGATGATAGGAATGTCACTTCAAATTCCTaGTCAGAGAATCTGCTTACAGATGCACGAGCACTT +
Preference number: 3 (lower is better)
Translates to: FSTDDRNVTSNS*SENLLTDARAL
Trigger: AAGTGCTCGTGCATCTGTAAGCAGATTCTCTGATCAGGAATTTGAAGTGACATTCCTATCATCTGTGGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000523764.1
ENST00000650049.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681145.1
3UTR TCA 72 bp ACAACCTCCAATGAGGACAAGTTTAAGCGAAGGAGGTaGCTCAACCATCTTCTTATTCAGCAATTTAGCAAA +
Preference number: 3 (lower is better)
Translates to: TTSNEDKFKRRR*LNHLLIQQFSK
Trigger: TTTGCTAAATTGCTGAATAAGAAGATGGTTGAGTCACCTCCTTCGCTTAAACTTGTCCTCATTGGAGGTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000650049.2
ENST00000679359.1
ENST00000681047.1
3UTR GCA 72 bp CACTTCAAATTCCTGATCAGAGAATCTGCTTACAGATaGACGAGCACTTTTTCTGATTTGGAGTCTCTTTTC +
Preference number: 3 (lower is better)
Translates to: HFKFLIRESAYR*TSTFSDLESLF
Trigger: GAAAAGAGACTCCAAATCAGAAAAAGTGCTCGTGCATCTGTAAGCAGATTCTCTGATCAGGAATTTGAAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000523764.1
ENST00000650049.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681145.1
3UTR-3UTR CAA 90 bp AAATTCCTGATCAGAGAATCTGCTTACAGATGCACGAGCACTTTTTCTGATTTGCTAAGTTCATCATCTTaGTTACGACAACCTCCAATG +
Preference number: 3 (lower is better)
Translates to: KFLIRESAYRCTSTFSDLLSSSS*LRQPPM
Trigger: CATTGGAGGTTGTCGTAACAAAGATGATGAACTTAG...CAAATCAGAAAAAGTGCTCGTGCATCTGTAAGCAGATTCTCTGATCAGGAATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000650049.2
ENST00000679359.1
ENST00000681047.1
3UTR GCA 72 bp TTTGGTAGTGAAATATCAACAAAACACAAGTTCAGCTaGCCTCCGCTTGCAAAATTGAATAACAAGGACAAG +
Preference number: 3 (lower is better)
Translates to: FGSEISTKHKFS*PPLAKLNNKDK
Trigger: CTTGTCCTTGTTATTCAATTTTGCAAGCGGAGGGCAGCTGAACTTGTGTTTTGTTGATATTTCACTACCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649708.2
3UTR CCA 72 bp AAAATCAAAAGTAAGCTAGTTACTTCCCAGATACAATaGGAGTACAGGTATTGGGTAAGTACAGCTGTTCCA +
Preference number: 3 (lower is better)
Translates to: KIKSKLVTSQIQ*EYRYWVSTAVP
Trigger: TGGAACAGCTGTACTTACCCAATACCTGTACTCCCATTGTATCTGGGAAGTAACTAGCTTACTTTTGATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616513.1
3UTR-3UTR CAA 90 bp GACAGCATAAACAAAAACAATTTTCACCAGTACCTAGTATGGAAAGGATTGCTGTCAAGGGGTAGTTTTTaGGCAAATCCACTAGTTCTT +
Preference number: 3 (lower is better)
Translates to: DSINKNNFHQYLVWKGLLSRGSF*ANPLVL
Trigger: AAGAACTAGTGGATTTGCCAAAAAACTACCCCTTGA...CAGCAATCCTTTCCATACTAGGTACTGGTGAAAATTGTTTTTGTTTATGCTGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
3UTR TCA 72 bp AAATGGAATGCTTTTAAGAGCACCCAAGTCACTTCTTaGATTCTTTGCTGCTTAGAAATTTCTTACACCAGA +
Preference number: 3 (lower is better)
Translates to: KWNAFKSTQVTS*ILCCLEISYTR
Trigger: TCTGGTGTAAGAAATTTCTAAGCAGCAAAGAATTCAAGAAGTGACTTGGGTGCTCTTAAAAGCATTCCATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616513.1
CDS-3UTR GCA 90 bp GAGCAGCTCTGCCCCTGTAGATTTGCAGGGTACAGCCTCCCTCCTGGCTGCTTTACAGCACAGGGCCCCTaGACCTGGCCCACAAAACCA +
Preference number: 4 (lower is better)
Translates to: EQLCPCRFAGYSLPPGCFTAQGP*TWPTKP
Trigger: TGGTTTTGTGGGCCAGGTGCAGGGGCCCTGTGCTGT...AAAGCAGCCAGGAGGGAGGCTGTACCCTGCAAATCTACAGGGGCAGAGCTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000616513.1
CDS-3UTR TCA 90 bp CACCCGCAGGCTCAACACCATGTGAAGCTACCATGGCTTGGGGCTTTCACCCTCAGGCTCAACACCATGTaGAGCTACCATGGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: HPQAQHHVKLPWLGAFTLRLNTM*SYHGLG
Trigger: CCCCAAGCCATGGTAGCTTCACATGGTGTTGAGCCT...GAGGGTGAAAGCCCCAAGCCATGGTAGCTTCACATGGTGTTGAGCCTGCGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616513.1
3UTR CAA 72 bp GTTCCCATGGTCTTGAGCAGCTCTGCCCCTGTAGATTaGCAGGGTACAGCCTCCCTCCTGGCTGCTTTCATG +
Preference number: 4 (lower is better)
Translates to: VPMVLSSSAPVD*QGTASLLAAFM
Trigger: CATGAAAGCAGCCAGGAGGGAGGCTGTACCCTGCAAATCTACAGGGGCAGAGCTGCTCAAGACCATGGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616513.1
CDS-3UTR GCA 90 bp GAGGCTGCCATGAAGGTCTCCGACATTGCCTGGAGACATTTTCCCCCATGGTCTCCCACATTTCCCTTCTaGACTGCCCTGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: EAAMKVSDIAWRHFPPWSPTFPF*TALAEV
Trigger: AACCTCTGCCAGGGCAGTGCAGAAGGGAAATGTGGG...AGACCATGGGGGAAAATGTCTCCAGGCAATGTCGGAGACCTTCATGGCAGCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616513.1
CDS-3UTR CCA 90 bp CCCAGTAGGGACTCTGTGTGGGGGCTCCAACCCCACATTTCCCTTCTGCACTGCGAGACCACCTCAGCCTaGATTTCGTTGTCCATATCA +
Preference number: 4 (lower is better)
Translates to: PSRDSVWGLQPHISLLHCETTSA*ISLSIS
Trigger: TGATATGGACAACGAAATCCAGGCTGAGGTGGTCTC...GCAGTGCAGAAGGGAAATGTGGGGTTGGAGCCCCCACACAGAGTCCCTACTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616513.1
CDS-3UTR CCA 90 bp TGCATTGGCCCCTTTCAGCCACGGCTGGAGCAGCTGGGACACAGGGTACCAAGTCTTCTTACAGGGCAGTaGGCAAGAGAAAAACGAGGA +
Preference number: 4 (lower is better)
Translates to: CIGPFQPRLEQLGHRVPSLLTGQ*AREKRG
Trigger: TCCTCGTTTTTCTCTTGCCCACTGCCCTGTAAGAAG...ACTTGGTACCCTGTGTCCCAGCTGCTCCAGCCGTGGCTGAAAGGGGCCAATGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616513.1
CDS-3UTR TCA 90 bp GAAAGACCGGCCCCCATGATTCAATTACCTTCCCCTGGGTCCCTTCCACAACACTTCATGGGCCGGCGTTaGGTGTCTGAGGTTTTTCCA +
Preference number: 4 (lower is better)
Translates to: ERPAPMIQLPSPGSLPQHFMGRR*VSEVFP
Trigger: TGGAAAAACCTCAGACACTCAACGCCGGCCCATGAA...GTGTTGTGGAAGGGACCCAGGGGAAGGTAATTGAATCATGGGGGCCGGTCTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000616513.1
CDS-3UTR TCA 90 bp CCCAGTAGGGACTCTGTGTGGGGGCTCCAACCCCACATTTCCCTTCTGCACTGCAGACACAATTCAAACTaGGATTTGGGTGGGGACATG +
Preference number: 4 (lower is better)
Translates to: PSRDSVWGLQPHISLLHCRHNSN*DLGGDM
Trigger: CATGTCCCCACCCAAATCTCAGTTTGAATTGTGTCT...GCAGTGCAGAAGGGAAATGTGGGGTTGGAGCCCCCACACAGAGTCCCTACTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000616513.1
CDS-3UTR GCA 90 bp AGAGCTTCCCAGCCAAGAAAAATGGATCCTAGACTTTGGCCCAGCAGTGTGAAGCTCCAGGGGAGTTCTTaGCTTCCAGCCACTGAGCGC +
Preference number: 4 (lower is better)
Translates to: RASQPRKMDPRLWPSSVKLQGSS*LPATER
Trigger: GCGCTCAGTGGCTGGAAGGCAAGAACTCCCCTGGAG...CTTCACACTGCTGGGCCAAAGTCTAGGATCCATTTTTCTTGGCTGGGAAGCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000679359.1
ENST00000681047.1
CDS-3UTR GCA 90 bp GAGGCTGCCATGAAGGTCTCCGACATTGCCTGGAGACATTTTCCCCCATGGTCTATTTCCCTTCTGCACTaGCCTGGCAGAGGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: EAAMKVSDIAWRHFPPWSISLLH*PGRGSP
Trigger: TGGAGAACCTCTGCCAGGGCAGTGCAGAAGGGAAAT...AGACCATGGGGGAAAATGTCTCCAGGCAATGTCGGAGACCTTCATGGCAGCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616513.1
CDS-3UTR GCA 90 bp AGCCACGGCTGGAGCAGCTGGGACACAGGGTACCAAGTCCCTAGGCTGCACACATTTCAAAACCAATTATaGCTTCCCAACAGTCCCCCA +
Preference number: 4 (lower is better)
Translates to: SHGWSSWDTGYQVPRLHTFQNQL*LPNSPP
Trigger: TGGGGGACTGTTGGGAAGGCATAATTGGTTTTGAAA...TGTGTGCAGCCTAGGGACTTGGTACCCTGTGTCCCAGCTGCTCCAGCCGTGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616513.1
CDS-3UTR CCA 90 bp CCAGTACCTAGTATGGAAAGGATTGCTGGCAGCACCTTGGCCTCTACCACCCTATTGCTGGCAGCACCTTaGCCTCTACCACCCTACACA +
Preference number: 4 (lower is better)
Translates to: PVPSMERIAGSTLASTTLLLAAP*PLPPYT
Trigger: TGTGTAGGGTGGTAGAGGCCAAGGTGCTGCCAGCAA...TAGGGTGGTAGAGGCCAAGGTGCTGCCAGCAATCCTTTCCATACTAGGTACTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR CCA 90 bp CTGTTGCCCAGTTCCAAAGTCGCTTCCACATTTTTGGGTATCTCTTCAGCAGCAGTACAGCCTCCCTCCTaGCTGCTTTCATGGGCCGGC +
Preference number: 4 (lower is better)
Translates to: LLPSSKVASTFLGISSAAVQPPS*LLSWAG
Trigger: GCCGGCCCATGAAAGCAGCCAGGAGGGAGGCTGTAC...TGCTGCTGAAGAGATACCCAAAAATGTGGAAGCGACTTTGGAACTGGGCAACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616513.1
CDS-3UTR TCA 90 bp CTGGTGGCTCAAAGCCAGATTCTCTGCAACCTGGTTCACATTCATCTCAGCAGCTGGAATCAGGGCCCCTaGCTGTCACTTCTCCAGCTA +
Preference number: 4 (lower is better)
Translates to: LVAQSQILCNLVHIHLSSWNQGP*LSLLQL
Trigger: TAGCTGGAGAAGTGACAGTCAGGGGCCCTGATTCCA...GCTGCTGAGATGAATGTGAACCAGGTTGCAGAGAATCTGGCTTTGAGCCACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR TCA 90 bp GAAAGGATTGCTGGCAGCACCTTGGCCTCTACCACCCTACACACACCTATAAAGGCTGGTCTCAACTGCTaGCCTCATGATCCACCCATC +
Preference number: 4 (lower is better)
Translates to: ERIAGSTLASTTLHTPIKAGLNC*PHDPPI
Trigger: GATGGGTGGATCATGAGGTCAGCAGTTGAGACCAGC...CTTTATAGGTGTGTGTAGGGTGGTAGAGGCCAAGGTGCTGCCAGCAATCCTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR TCA 90 bp GAGCAGCTCTGCCCCTGTAGATTTGCAGGGTACAGCCTCCCTCCTGGCTGCTTTGCTCCTTGCTACTTTTaGAAATTTCTGCAGCCAGCT +
Preference number: 4 (lower is better)
Translates to: EQLCPCRFAGYSLPPGCFAPCYF*KFLQPA
Trigger: AGCTGGCTGCAGAAATTTTCAAAAGTAGCAAGGAGC...AAAGCAGCCAGGAGGGAGGCTGTACCCTGCAAATCTACAGGGGCAGAGCTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616513.1
CDS-3UTR TCA 90 bp AGAGGCTGCCATGAAGGTCTCCGACATTGCCTGGAGACATTTTCCCCCATGGTCCCAAATTTCCATTCTTaGCTTCTGTGCACCCGCAGG +
Preference number: 4 (lower is better)
Translates to: RGCHEGLRHCLETFSPMVPNFHS*LLCTRR
Trigger: CCTGCGGGTGCACAGAAGTCAAGAATGGAAATTTGG...GACCATGGGGGAAAATGTCTCCAGGCAATGTCGGAGACCTTCATGGCAGCCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616513.1
CDS-3UTR GCA 90 bp TGCCCAGCGCTCTTTCAAAATGCCACCTTGCCATCTTACAATGCATTATGCTGGCTCCAGGGGAGTTCTTaGCTTCCAGCCACTGAGCGC +
Preference number: 4 (lower is better)
Translates to: CPALFQNATLPSYNALCWLQGSS*LPATER
Trigger: GCGCTCAGTGGCTGGAAGGCAAGAACTCCCCTGGAG...CCAGCATAATGCATTGTAAGATGGCAAGGTGGCATTTTGAAAGAGCGCTGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR GCA 90 bp GAAAGACCGGCCCCCATGATTCAATTACCTTCCCCTGGGTCCCTTCCACAACACAACTGTTCCAGCCTCTaGCTGTTGCCCAGTTCCAAA +
Preference number: 4 (lower is better)
Translates to: ERPAPMIQLPSPGSLPQHNCSSL*LLPSSK
Trigger: TTTGGAACTGGGCAACAGGCAGAGGCTGGAACAGTT...GTGTTGTGGAAGGGACCCAGGGGAAGGTAATTGAATCATGGGGGCCGGTCTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616513.1
CDS-3UTR CCA 90 bp CACCCGCAGGCTCAACACCATGTGAAGCTACCATGGCTTGGGGCTTTCACCCTCACTTACAGTTCCATATaGCTGGGGAGACCTCAGAAT +
Preference number: 4 (lower is better)
Translates to: HPQAQHHVKLPWLGAFTLTYSSI*LGRPQN
Trigger: ATTCTGAGGTCTCCCCAGCCATATGGAACTGTAAGT...GAGGGTGAAAGCCCCAAGCCATGGTAGCTTCACATGGTGTTGAGCCTGCGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616513.1
3UTR CAA 72 bp CTTCTGAGCCCTCCAAACTGTTCCAGCCTCTGCCTGTaGCCCAGTTCCAAAGTCGCTTCCACATTTTTGGGT +
Preference number: 4 (lower is better)
Translates to: LLSPPNCSSLCL*PSSKVASTFLG
Trigger: ACCCAAAAATGTGGAAGCGACTTTGGAACTGGGCAACAGGCAGAGGCTGGAACAGTTTGGAGGGCTCAGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616513.1
3UTR CAA 72 bp AGGTCATGCTTAAGCAAGAGGTGGGTTCCCATGGTCTaGAGCAGCTCTGCCCCTGTAGATTTGCAGGGTACA +
Preference number: 4 (lower is better)
Translates to: RSCLSKRWVPMV*SSSAPVDLQGT
Trigger: TGTACCCTGCAAATCTACAGGGGCAGAGCTGCTCAAGACCATGGGAACCCACCTCTTGCTTAAGCATGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616513.1
CDS-3UTR TCA 90 bp AGAGGCTGCCATGAAGGTCTCCGACATTGCCTGGAGACATTTTCCCCCATGGTCCAAAATGACCTCCTTTaGCTCCAGGTCTCACATCCA +
Preference number: 4 (lower is better)
Translates to: RGCHEGLRHCLETFSPMVQNDLL*LQVSHP
Trigger: TGGATGTGAGACCTGGAGTCAAAGGAGGTCATTTTG...GACCATGGGGGAAAATGTCTCCAGGCAATGTCGGAGACCTTCATGGCAGCCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000616513.1
CDS-3UTR GCA 90 bp ATAATTGTGCCAGCTGCCATACACTCCACAACTCCAATCCCAAAATGCTCGTTCCTCCAGGGGAGTTCTTaGCTTCCAGCCACTGAGCGC +
Preference number: 4 (lower is better)
Translates to: IIVPAAIHSTTPIPKCSFLQGSS*LPATER
Trigger: GCGCTCAGTGGCTGGAAGGCAAGAACTCCCCTGGAG...GAACGAGCATTTTGGGATTGGAGTTGTGGAGTGTATGGCAGCTGGCACAATTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679359.1
ENST00000681047.1
CDS-3UTR GCA 90 bp CACTCTCAGCCAGAAAGCCAGTTATATCTCCTTCGTGAGGAACCACAATGTCAACTCCAGGGGAGTTCTTaGCTTCCAGCCACTGAGCGC +
Preference number: 4 (lower is better)
Translates to: HSQPESQLYLLREEPQCQLQGSS*LPATER
Trigger: GCGCTCAGTGGCTGGAAGGCAAGAACTCCCCTGGAG...TTGACATTGTGGTTCCTCACGAAGGAGATATAACTGGCTTTCTGGCTGAGAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679359.1
ENST00000681047.1
ENST00000681145.1
CDS-3UTR GCA 90 bp ATTGGCCCCTTTCAGCCACGGCTGGAGCAGCTGGGACACAGGGTACCAAGTCCCGTCTTTCTTTTCTACTaGATTGTCAGGCTGCAAATT +
Preference number: 4 (lower is better)
Translates to: IGPFQPRLEQLGHRVPSPVFLFY*IVRLQI
Trigger: AATTTGCAGCCTGACAATGCAGTAGAAAAGAAAGAC...GGGACTTGGTACCCTGTGTCCCAGCTGCTCCAGCCGTGGCTGAAAGGGGCCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616513.1
CDS-3UTR TCA 90 bp GCCCAGCGCTCTTTCAAAATGCCACCTTGCCATCTTACAATGCATTATGCTGGTTGGAATCAGGGCCCCTaGCTGTCACTTCTCCAGCTA +
Preference number: 4 (lower is better)
Translates to: AQRSFKMPPCHLTMHYAGWNQGP*LSLLQL
Trigger: TAGCTGGAGAAGTGACAGTCAGGGGCCCTGATTCCA...ACCAGCATAATGCATTGTAAGATGGCAAGGTGGCATTTTGAAAGAGCGCTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR TCA 90 bp CCAGTACCTAGTATGGAAAGGATTGCTGGCAGCACCTTGGCCTCTACCACCCTAGGCCACATTGATGAATaGCTGAGAGGAGACTGCAAA +
Preference number: 4 (lower is better)
Translates to: PVPSMERIAGSTLASTTLGHIDE*LRGDCK
Trigger: TTTGCAGTCTCCTCTCAGTCATTCATCAATGTGGCC...TAGGGTGGTAGAGGCCAAGGTGCTGCCAGCAATCCTTTCCATACTAGGTACTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR GCA 90 bp GGAATGTCACTTCAAATTCCTGATCAGAGAATCTGCTTACAGATGCACGAGCACCTCCAGGGGAGTTCTTaGCTTCCAGCCACTGAGCGC +
Preference number: 4 (lower is better)
Translates to: GMSLQIPDQRICLQMHEHLQGSS*LPATER
Trigger: GCGCTCAGTGGCTGGAAGGCAAGAACTCCCCTGGAG...GTGCTCGTGCATCTGTAAGCAGATTCTCTGATCAGGAATTTGAAGTGACATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000523764.1
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681145.1
CDS-3UTR GCA 90 bp CCAGTACCTAGTATGGAAAGGATTGCTGGCAGCACCTTGGCCTCTACCACCCTATTCAAGCAATTCTCCTaGCTCAGTCTCCCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: PVPSMERIAGSTLASTTLFKQFS*LSLPSS
Trigger: GCTACTTGGGAGACTGAGGCAGGAGAATTGCTTGAA...TAGGGTGGTAGAGGCCAAGGTGCTGCCAGCAATCCTTTCCATACTAGGTACTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR GCA 90 bp ATTGGCCCCTTTCAGCCACGGCTGGAGCAGCTGGGACACAGGGTACCAAGTCCCACTGCATTGTCAGGCTaGAAATTTTCTGAACTTTTA +
Preference number: 4 (lower is better)
Translates to: IGPFQPRLEQLGHRVPSPTALSG*KFSELL
Trigger: TAAAAGTTCAGAAAATTTGCAGCCTGACAATGCAGT...GGGACTTGGTACCCTGTGTCCCAGCTGCTCCAGCCGTGGCTGAAAGGGGCCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000616513.1
CDS-3UTR GCA 90 bp CTGTTGCCCAGTTCCAAAGTCGCTTCCACATTTTTGGGTATCTCTTCAGCAGCAGGTCTTGAGCAGCTCTaGCCCTGTAGATTTGCAGGG +
Preference number: 4 (lower is better)
Translates to: LLPSSKVASTFLGISSAAGLEQL*PCRFAG
Trigger: CCCTGCAAATCTACAGGGGCAGAGCTGCTCAAGACC...TGCTGCTGAAGAGATACCCAAAAATGTGGAAGCGACTTTGGAACTGGGCAACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616513.1
CDS-3UTR CCA 90 bp GCCCAGCGCTCTTTCAAAATGCCACCTTGCCATCTTACAATGCATTATGCTGGTTTGCTGGCAGCACCTTaGCCTCTACCACCCTACACA +
Preference number: 4 (lower is better)
Translates to: AQRSFKMPPCHLTMHYAGLLAAP*PLPPYT
Trigger: TGTGTAGGGTGGTAGAGGCCAAGGTGCTGCCAGCAA...ACCAGCATAATGCATTGTAAGATGGCAAGGTGGCATTTTGAAAGAGCGCTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR CCA 90 bp CCAGTACCTAGTATGGAAAGGATTGCTGGCAGCACCTTGGCCTCTACCACCCTACACCAGTACCTAGTATaGAAAGGATTGCTGGCAGCA +
Preference number: 4 (lower is better)
Translates to: PVPSMERIAGSTLASTTLHQYLV*KGLLAA
Trigger: TGCTGCCAGCAATCCTTTCCATACTAGGTACTGGTG...TAGGGTGGTAGAGGCCAAGGTGCTGCCAGCAATCCTTTCCATACTAGGTACTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR TCA 90 bp CCAGTACCTAGTATGGAAAGGATTGCTGGCAGCACCTTGGCCTCTACCACCCTAGAAGTGAGGATACAGTaGATCTTCCACAAGATAGCG +
Preference number: 4 (lower is better)
Translates to: PVPSMERIAGSTLASTTLEVRIQ*IFHKIA
Trigger: CGCTATCTTGTGGAAGATTCACTGTATCCTCACTTC...TAGGGTGGTAGAGGCCAAGGTGCTGCCAGCAATCCTTTCCATACTAGGTACTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR TCA 90 bp AGAGCTTCCCAGCCAAGAAAAATGGATCCTAGACTTTGGCCCAGCAGTGTGAAGCCCAGCAGTGTGAAGTaGGGATACAGTGAATCTTCC +
Preference number: 4 (lower is better)
Translates to: RASQPRKMDPRLWPSSVKPSSVK*GYSESS
Trigger: GGAAGATTCACTGTATCCTCACTTCACACTGCTGGG...CTTCACACTGCTGGGCCAAAGTCTAGGATCCATTTTTCTTGGCTGGGAAGCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000679359.1
ENST00000681047.1
CDS-3UTR TCA 90 bp GAAAGGATTGCTGGCAGCACCTTGGCCTCTACCACCCTACACACACCTATAAAGGTCAGTCCCACCTCTTaGCTGTATGCTTTGAGAACA +
Preference number: 4 (lower is better)
Translates to: ERIAGSTLASTTLHTPIKVSPTS*LYALRT
Trigger: TGTTCTCAAAGCATACAGTCAAGAGGTGGGACTGAC...CTTTATAGGTGTGTGTAGGGTGGTAGAGGCCAAGGTGCTGCCAGCAATCCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR TCA 90 bp ACTGCTTGCCCAGCGCTCTTTCAAAATGCCACCTTGCCATCTTACAATGCATTAGCTGGTCTCAACTGCTaGCCTCATGATCCACCCATC +
Preference number: 4 (lower is better)
Translates to: TACPALFQNATLPSYNALAGLNC*PHDPPI
Trigger: GATGGGTGGATCATGAGGTCAGCAGTTGAGACCAGC...TAATGCATTGTAAGATGGCAAGGTGGCATTTTGAAAGAGCGCTGGGCAAGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR TCA 90 bp CAGCCAGAAAGCCAGTTATATCTCCTTCGTGAGGAACCACAATGTCAAGCTTTGGCTGGTCTCAACTGCTaGCCTCATGATCCACCCATC +
Preference number: 4 (lower is better)
Translates to: QPESQLYLLREEPQCQALAGLNC*PHDPPI
Trigger: GATGGGTGGATCATGAGGTCAGCAGTTGAGACCAGC...CAAAGCTTGACATTGTGGTTCCTCACGAAGGAGATATAACTGGCTTTCTGGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679359.1
ENST00000681047.1
CDS-3UTR TCA 90 bp GAAAGGATTGCTGGCAGCACCTTGGCCTCTACCACCCTACACACACCTATAAAGAGAACATCCTGTGACTaGCCCTCTGTTTGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: ERIAGSTLASTTLHTPIKRTSCD*PSVCCF
Trigger: AAAGCAGCAAACAGAGGGTCAGTCACAGGATGTTCT...CTTTATAGGTGTGTGTAGGGTGGTAGAGGCCAAGGTGCTGCCAGCAATCCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR TCA 90 bp CCCTGGCCCCTCCAAATCTCACGTCATCACATTTCAAAACCAATTATGCCTTCCAAAGACCGGCCCCCATaGTTCAATTACCTTCCCCTG +
Preference number: 4 (lower is better)
Translates to: PWPLQISRHHISKPIMPSKDRPP*FNYLPL
Trigger: CAGGGGAAGGTAATTGAATCATGGGGGCCGGTCTTT...GGAAGGCATAATTGGTTTTGAAATGTGATGACGTGAGATTTGGAGGGGCCAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000616513.1
CDS-3UTR GCA 90 bp GAAAGGATTGCTGGCAGCACCTTGGCCTCTACCACCCTACACACACCTATAAAGCCTGATCAGAGAATCTaGTTACAGATGCACGAGCAC +
Preference number: 4 (lower is better)
Translates to: ERIAGSTLASTTLHTPIKPDQRI*LQMHEH
Trigger: GTGCTCGTGCATCTGTAAGCAGATTCTCTGATCAGG...CTTTATAGGTGTGTGTAGGGTGGTAGAGGCCAAGGTGCTGCCAGCAATCCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR GCA 90 bp GTCACCTTTCTCCAGTTCCCAACAAGTTCTTCATCTCCATCTGAGACCACCTCATGCCATGAGAGAGGCTaGCATGAAGGTCTCCGACAT +
Preference number: 4 (lower is better)
Translates to: VTFLQFPTSSSSPSETTSCHERG*HEGLRH
Trigger: ATGTCGGAGACCTTCATGGCAGCCTCTCTCATGGCA...TGAGGTGGTCTCAGATGGAGATGAAGAACTTGTTGGGAACTGGAGAAAGGTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616513.1
CDS-3UTR GCA 90 bp CCCTGGCCCCTCCAAATCTCACGTCATCACATTTCAAAACCAATTATGCCTTCCGGGTTACAGGGCCCATaGAAGTCCAAAATCCAGTGG +
Preference number: 4 (lower is better)
Translates to: PWPLQISRHHISKPIMPSGLQGP*KSKIQW
Trigger: CCACTGGATTTTGGACTTGCATGGGCCCTGTAACCC...GGAAGGCATAATTGGTTTTGAAATGTGATGACGTGAGATTTGGAGGGGCCAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000616513.1
CDS-3UTR CCA 90 bp ACTGCTTGCCCAGCGCTCTTTCAAAATGCCACCTTGCCATCTTACAATGCATTATTGCTGGCAGCACCTTaGCCTCTACCACCCTACACA +
Preference number: 4 (lower is better)
Translates to: TACPALFQNATLPSYNALLLAAP*PLPPYT
Trigger: TGTGTAGGGTGGTAGAGGCCAAGGTGCTGCCAGCAA...TAATGCATTGTAAGATGGCAAGGTGGCATTTTGAAAGAGCGCTGGGCAAGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR CCA 90 bp GAAAGGATTGCTGGCAGCACCTTGGCCTCTACCACCCTACACACACCTATAAAGCACCAGTACCTAGTATaGAAAGGATTGCTGGCAGCA +
Preference number: 4 (lower is better)
Translates to: ERIAGSTLASTTLHTPIKHQYLV*KGLLAA
Trigger: TGCTGCCAGCAATCCTTTCCATACTAGGTACTGGTG...CTTTATAGGTGTGTGTAGGGTGGTAGAGGCCAAGGTGCTGCCAGCAATCCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR CCA 90 bp CCAGTACCTAGTATGGAAAGGATTGCTGGCAGCACCTTGGCCTCTACCACCCTAAAATCTCCACTGCTGTaGGTTCAAAACAGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: PVPSMERIAGSTLASTTLKSPLL*VQNSRL
Trigger: AAGCCTGCTGTTTTGAACCCACAGCAGTGGAGATTT...TAGGGTGGTAGAGGCCAAGGTGCTGCCAGCAATCCTTTCCATACTAGGTACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR TCA 90 bp CTGGTGGCTCAAAGCCAGATTCTCTGCAACCTGGTTCACATTCATCTCAGCAGCGAAGTGAGGATACAGTaGATCTTCCACAAGATAGCG +
Preference number: 4 (lower is better)
Translates to: LVAQSQILCNLVHIHLSSEVRIQ*IFHKIA
Trigger: CGCTATCTTGTGGAAGATTCACTGTATCCTCACTTC...GCTGCTGAGATGAATGTGAACCAGGTTGCAGAGAATCTGGCTTTGAGCCACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR TCA 90 bp CTCCACTGCTGTGGGTTCAAAACAGCAGGCTTGGACCACTCAAAAATGACATCTCCCAGCAGTGTGAAGTaGGGATACAGTGAATCTTCC +
Preference number: 4 (lower is better)
Translates to: LHCCGFKTAGLDHSKMTSPSSVK*GYSESS
Trigger: GGAAGATTCACTGTATCCTCACTTCACACTGCTGGG...AGATGTCATTTTTGAGTGGTCCAAGCCTGCTGTTTTGAACCCACAGCAGTGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR TCA 90 bp CCAGTACCTAGTATGGAAAGGATTGCTGGCAGCACCTTGGCCTCTACCACCCTAAAGTTCCACATACAATaGGCCCAGGGAAGAATAATG +
Preference number: 4 (lower is better)
Translates to: PVPSMERIAGSTLASTTLKFHIQ*AQGRIM
Trigger: CATTATTCTTCCCTGGGCTCATTGTATGTGGAACTT...TAGGGTGGTAGAGGCCAAGGTGCTGCCAGCAATCCTTTCCATACTAGGTACTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
CDS-3UTR TCA 90 bp ATAGTCTTCTTCACTCTCAGCCAGAAAGCCAGTTATATCTCCTTCGTGAGGAACTGGAATCAGGGCCCCTaGCTGTCACTTCTCCAGCTA +
Preference number: 4 (lower is better)
Translates to: IVFFTLSQKASYISFVRNWNQGP*LSLLQL
Trigger: TAGCTGGAGAAGTGACAGTCAGGGGCCCTGATTCCA...GTTCCTCACGAAGGAGATATAACTGGCTTTCTGGCTGAGAGTGAAGAAGACTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
CDS-3UTR TCA 90 bp GGAATGTCACTTCAAATTCCTGATCAGAGAATCTGCTTACAGATGCACGAGCACTGGAATCAGGGCCCCTaGCTGTCACTTCTCCAGCTA +
Preference number: 4 (lower is better)
Translates to: GMSLQIPDQRICLQMHEHWNQGP*LSLLQL
Trigger: TAGCTGGAGAAGTGACAGTCAGGGGCCCTGATTCCA...GTGCTCGTGCATCTGTAAGCAGATTCTCTGATCAGGAATTTGAAGTGACATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
CDS-3UTR TCA 90 bp GCCCAGCGCTCTTTCAAAATGCCACCTTGCCATCTTACAATGCATTATGCTGGTCCCTTAACACAAAGATaGATCAGCCTGTGGATGGGG +
Preference number: 4 (lower is better)
Translates to: AQRSFKMPPCHLTMHYAGPLTQR*ISLWMG
Trigger: CCCCATCCACAGGCTGATTCATCTTTGTGTTAAGGG...ACCAGCATAATGCATTGTAAGATGGCAAGGTGGCATTTTGAAAGAGCGCTGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR TCA 90 bp CCAGTACCTAGTATGGAAAGGATTGCTGGCAGCACCTTGGCCTCTACCACCCTACTGTTTGCTGCTTTTTaGTCTGATGACAGATGGCTT +
Preference number: 4 (lower is better)
Translates to: PVPSMERIAGSTLASTTLLFAAF*SDDRWL
Trigger: AAGCCATCTGTCATCAGATCAAAAAGCAGCAAACAG...TAGGGTGGTAGAGGCCAAGGTGCTGCCAGCAATCCTTTCCATACTAGGTACTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR TCA 90 bp GGTATGGAGGGTATGTGGGGCGAGATGGTGCAAGTCTACGTGACTTGTTCCAATACATGGACGTTTTGCTaGTCAAATGACACTGCTGCT +
Preference number: 4 (lower is better)
Translates to: GMEGMWGEMVQVYVTCSNTWTFC*SNDTAA
Trigger: AGCAGCAGTGTCATTTGATCAGCAAAACGTCCATGT...ATTGGAACAAGTCACGTAGACTTGCACCATCTCGCCCCACATACCCTCCATACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649708.2
CDS-3UTR GCA 90 bp CCAGTACCTAGTATGGAAAGGATTGCTGGCAGCACCTTGGCCTCTACCACCCTAGTAGCCCACATCCTCTaGTTTTATGGGCTTAATGAT +
Preference number: 4 (lower is better)
Translates to: PVPSMERIAGSTLASTTLVAHIL*FYGLND
Trigger: ATCATTAAGCCCATAAAAGCAGAGGATGTGGGCTAC...TAGGGTGGTAGAGGCCAAGGTGCTGCCAGCAATCCTTTCCATACTAGGTACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR GCA 90 bp CATTTCAGCATTAACCCATATGTCCACAGTCCAAAGTCTCATCCGAGACAAGGCGAAGGTCTCCGACATTaGCTGGAGACATTTTCCCCC +
Preference number: 4 (lower is better)
Translates to: HFSINPYVHSPKSHPRQGEGLRH*LETFSP
Trigger: GGGGGAAAATGTCTCCAGGCAATGTCGGAGACCTTC...GCCTTGTCTCGGATGAGACTTTGGACTGTGGACATATGGGTTAATGCTGAAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616513.1
CDS-3UTR CCA 90 bp CCAGTACCTAGTATGGAAAGGATTGCTGGCAGCACCTTGGCCTCTACCACCCTACATGTATACCAAGAATaGAAGCCGAAGGCTAGTCAT +
Preference number: 4 (lower is better)
Translates to: PVPSMERIAGSTLASTTLHVYQE*KPKASH
Trigger: ATGACTAGCCTTCGGCTTCCATTCTTGGTATACATG...TAGGGTGGTAGAGGCCAAGGTGCTGCCAGCAATCCTTTCCATACTAGGTACTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR TCA 90 bp CTGGTGGCTCAAAGCCAGATTCTCTGCAACCTGGTTCACATTCATCTCAGCAGCCCTTCTAGTATCTGTTaGCCGTTGACATTAACATCG +
Preference number: 4 (lower is better)
Translates to: LVAQSQILCNLVHIHLSSPSSIC*PLTLTS
Trigger: CGATGTTAATGTCAACGGTCAACAGATACTAGAAGG...GCTGCTGAGATGAATGTGAACCAGGTTGCAGAGAATCTGGCTTTGAGCCACCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR TCA 90 bp ACTGCTTGCCCAGCGCTCTTTCAAAATGCCACCTTGCCATCTTACAATGCATTACCCAGCAGTGTGAAGTaGGGATACAGTGAATCTTCC +
Preference number: 4 (lower is better)
Translates to: TACPALFQNATLPSYNALPSSVK*GYSESS
Trigger: GGAAGATTCACTGTATCCTCACTTCACACTGCTGGG...TAATGCATTGTAAGATGGCAAGGTGGCATTTTGAAAGAGCGCTGGGCAAGCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR TCA 90 bp GATGTTTGGTATGGAGGGTATGTGGGGCGAGATGGTGCAAGTCTACGTGACTTGAAGTTCCACATACAATaGGCCCAGGGAAGAATAATG +
Preference number: 4 (lower is better)
Translates to: DVWYGGYVGRDGASLRDLKFHIQ*AQGRIM
Trigger: CATTATTCTTCCCTGGGCTCATTGTATGTGGAACTT...CAAGTCACGTAGACTTGCACCATCTCGCCCCACATACCCTCCATACCAAACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649708.2
CDS-3UTR TCA 90 bp GAAAGGATTGCTGGCAGCACCTTGGCCTCTACCACCCTACACACACCTATAAAGAAGTTCCACATACAATaGGCCCAGGGAAGAATAATG +
Preference number: 4 (lower is better)
Translates to: ERIAGSTLASTTLHTPIKKFHIQ*AQGRIM
Trigger: CATTATTCTTCCCTGGGCTCATTGTATGTGGAACTT...CTTTATAGGTGTGTGTAGGGTGGTAGAGGCCAAGGTGCTGCCAGCAATCCTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
CDS-3UTR TCA 90 bp GAAAGGATTGCTGGCAGCACCTTGGCCTCTACCACCCTACACACACCTATAAAGTTCCCCAAAGGACAATaGCCAAACACACACATAAAG +
Preference number: 4 (lower is better)
Translates to: ERIAGSTLASTTLHTPIKFPKGQ*PNTHIK
Trigger: CTTTATGTGTGTGTTTGGTCATTGTCCTTTGGGGAA...CTTTATAGGTGTGTGTAGGGTGGTAGAGGCCAAGGTGCTGCCAGCAATCCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
CDS-3UTR TCA 90 bp CTGGTGGCTCAAAGCCAGATTCTCTGCAACCTGGTTCACATTCATCTCAGCAGCTTCCCCAAAGGACAATaGCCAAACACACACATAAAG +
Preference number: 4 (lower is better)
Translates to: LVAQSQILCNLVHIHLSSFPKGQ*PNTHIK
Trigger: CTTTATGTGTGTGTTTGGTCATTGTCCTTTGGGGAA...GCTGCTGAGATGAATGTGAACCAGGTTGCAGAGAATCTGGCTTTGAGCCACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681145.1
CDS-3UTR TCA 90 bp TGCCCAGCGCTCTTTCAAAATGCCACCTTGCCATCTTACAATGCATTATGCTGGGTCAGTCCCACCTCTTaGCTGTATGCTTTGAGAACA +
Preference number: 4 (lower is better)
Translates to: CPALFQNATLPSYNALCWVSPTS*LYALRT
Trigger: TGTTCTCAAAGCATACAGTCAAGAGGTGGGACTGAC...CCAGCATAATGCATTGTAAGATGGCAAGGTGGCATTTTGAAAGAGCGCTGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR TCA 90 bp CCAGTACCTAGTATGGAAAGGATTGCTGGCAGCACCTTGGCCTCTACCACCCTAACATTGATGAATGACTaGGAGGAGACTGCAAAGAAA +
Preference number: 4 (lower is better)
Translates to: PVPSMERIAGSTLASTTLTLMND*EETAKK
Trigger: TTTCTTTGCAGTCTCCTCTCAGTCATTCATCAATGT...TAGGGTGGTAGAGGCCAAGGTGCTGCCAGCAATCCTTTCCATACTAGGTACTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR TCA 90 bp CTCCACTGCTGTGGGTTCAAAACAGCAGGCTTGGACCACTCAAAAATGACATCTAGAACATCCTGTGACTaGCCCTCTGTTTGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: LHCCGFKTAGLDHSKMTSRTSCD*PSVCCF
Trigger: AAAGCAGCAAACAGAGGGTCAGTCACAGGATGTTCT...AGATGTCATTTTTGAGTGGTCCAAGCCTGCTGTTTTGAACCCACAGCAGTGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR TCA 90 bp TGCCCAGCGCTCTTTCAAAATGCCACCTTGCCATCTTACAATGCATTATGCTGGAGAACATCCTGTGACTaGCCCTCTGTTTGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: CPALFQNATLPSYNALCWRTSCD*PSVCCF
Trigger: AAAGCAGCAAACAGAGGGTCAGTCACAGGATGTTCT...CCAGCATAATGCATTGTAAGATGGCAAGGTGGCATTTTGAAAGAGCGCTGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR TCA 90 bp AGTCTTCTTCACTCTCAGCCAGAAAGCCAGTTATATCTCCTTCGTGAGGAACCATGTCAGAACATCCTGTaGCTGACCCTCTGTTTGCTG +
Preference number: 4 (lower is better)
Translates to: SLLHSQPESQLYLLREEPCQNIL*LTLCLL
Trigger: CAGCAAACAGAGGGTCAGTCACAGGATGTTCTGACA...TGGTTCCTCACGAAGGAGATATAACTGGCTTTCTGGCTGAGAGTGAAGAAGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
CDS-3UTR GCA 90 bp AGCGAAGGAGGTGACTCAACCATCTTCTTATTCAGCAATTTAGCAAAGGCTCTGGCATCACTGCACTCCTaGCTGGGCAACAAGTGTGAA +
Preference number: 4 (lower is better)
Translates to: SEGGDSTIFLFSNLAKALASLHS*LGNKCE
Trigger: TTCACACTTGTTGCCCAGGCAGGAGTGCAGTGATGC...CAGAGCCTTTGCTAAATTGCTGAATAAGAAGATGGTTGAGTCACCTCCTTCGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679359.1
CDS-3UTR GCA 90 bp CTCCACTGCTGTGGGTTCAAAACAGCAGGCTTGGACCACTCAAAAATGACATCTACATCAGGAACACACTaGATTAGAGCTTCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: LHCCGFKTAGLDHSKMTSTSGTH*IRASQP
Trigger: TGGCTGGGAAGCTCTAATGCAGTGTGTTCCTGATGT...AGATGTCATTTTTGAGTGGTCCAAGCCTGCTGTTTTGAACCCACAGCAGTGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR GCA 90 bp GCCCAGCGCTCTTTCAAAATGCCACCTTGCCATCTTACAATGCATTATGCTGGTACATCAGGAACACACTaGATTAGAGCTTCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: AQRSFKMPPCHLTMHYAGTSGTH*IRASQP
Trigger: TGGCTGGGAAGCTCTAATGCAGTGTGTTCCTGATGT...ACCAGCATAATGCATTGTAAGATGGCAAGGTGGCATTTTGAAAGAGCGCTGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR GCA 90 bp GAAAGGATTGCTGGCAGCACCTTGGCCTCTACCACCCTACACACACCTATAAAGTCGTTCCACATGGTATaGAGACCAATTGTTGCTTCA +
Preference number: 4 (lower is better)
Translates to: ERIAGSTLASTTLHTPIKSFHMV*RPIVAS
Trigger: TGAAGCAACAATTGGTCTGCATACCATGTGGAACGA...CTTTATAGGTGTGTGTAGGGTGGTAGAGGCCAAGGTGCTGCCAGCAATCCTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR GCA 90 bp CTCCACTGCTGTGGGTTCAAAACAGCAGGCTTGGACCACTCAAAAATGACATCTTTCTTCTGCCTCACTTaGAGAAACCTCATGAGCTGC +
Preference number: 4 (lower is better)
Translates to: LHCCGFKTAGLDHSKMTSFFCLT*RNLMSC
Trigger: GCAGCTCATGAGGTTTCTGCAAGTGAGGCAGAAGAA...AGATGTCATTTTTGAGTGGTCCAAGCCTGCTGTTTTGAACCCACAGCAGTGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR GCA 90 bp GCCCAGCGCTCTTTCAAAATGCCACCTTGCCATCTTACAATGCATTATGCTGGTTTCTTCTGCCTCACTTaGAGAAACCTCATGAGCTGC +
Preference number: 4 (lower is better)
Translates to: AQRSFKMPPCHLTMHYAGFFCLT*RNLMSC
Trigger: GCAGCTCATGAGGTTTCTGCAAGTGAGGCAGAAGAA...ACCAGCATAATGCATTGTAAGATGGCAAGGTGGCATTTTGAAAGAGCGCTGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR GCA 90 bp CTCCACTGCTGTGGGTTCAAAACAGCAGGCTTGGACCACTCAAAAATGACATCTTTCAAGCAATTCTCCTaGCTCAGTCTCCCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: LHCCGFKTAGLDHSKMTSFKQFS*LSLPSS
Trigger: GCTACTTGGGAGACTGAGGCAGGAGAATTGCTTGAA...AGATGTCATTTTTGAGTGGTCCAAGCCTGCTGTTTTGAACCCACAGCAGTGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR GCA 90 bp TGCCCAGCGCTCTTTCAAAATGCCACCTTGCCATCTTACAATGCATTATGCTGGTTCAAGCAATTCTCCTaGCTCAGTCTCCCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: CPALFQNATLPSYNALCWFKQFS*LSLPSS
Trigger: GCTACTTGGGAGACTGAGGCAGGAGAATTGCTTGAA...CCAGCATAATGCATTGTAAGATGGCAAGGTGGCATTTTGAAAGAGCGCTGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR GCA 90 bp TGGTATGGAGGGTATGTGGGGCGAGATGGTGCAAGTCTACGTGACTTGTTCCAAATAACAAGGACAAGGTaGAGTAGAAGGAAAGTGCCT +
Preference number: 4 (lower is better)
Translates to: WYGGYVGRDGASLRDLFQITRTR*SRRKVP
Trigger: AGGCACTTTCCTTCTACTGCACCTTGTCCTTGTTAT...TTGGAACAAGTCACGTAGACTTGCACCATCTCGCCCCACATACCCTCCATACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649708.2
CDS-3UTR CCA 90 bp GCCCAGCGCTCTTTCAAAATGCCACCTTGCCATCTTACAATGCATTATGCTGGTGGCTCTGATCTGCAATaGATGATTCTTTTCCGGCCT +
Preference number: 4 (lower is better)
Translates to: AQRSFKMPPCHLTMHYAGGSDLQ*MILFRP
Trigger: AGGCCGGAAAAGAATCATCCATTGCAGATCAGAGCC...ACCAGCATAATGCATTGTAAGATGGCAAGGTGGCATTTTGAAAGAGCGCTGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR CCA 90 bp CTGGTGGCTCAAAGCCAGATTCTCTGCAACCTGGTTCACATTCATCTCAGCAGCAATGCTCGTTCCACATaGTATGCAGACCAATTGTTG +
Preference number: 4 (lower is better)
Translates to: LVAQSQILCNLVHIHLSSNARST*YADQLL
Trigger: CAACAATTGGTCTGCATACCATGTGGAACGAGCATT...GCTGCTGAGATGAATGTGAACCAGGTTGCAGAGAATCTGGCTTTGAGCCACCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR CCA 90 bp GCCCAGCGCTCTTTCAAAATGCCACCTTGCCATCTTACAATGCATTATGCTGGTCACCAGTACCTAGTATaGAAAGGATTGCTGGCAGCA +
Preference number: 4 (lower is better)
Translates to: AQRSFKMPPCHLTMHYAGHQYLV*KGLLAA
Trigger: TGCTGCCAGCAATCCTTTCCATACTAGGTACTGGTG...ACCAGCATAATGCATTGTAAGATGGCAAGGTGGCATTTTGAAAGAGCGCTGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR CCA 90 bp GTCACCTTTCTCCAGTTCCCAACAAGTTCTTCATCTCCATCTGAGACCACCTCATGGCAAACTTTTGCCTaGGCATCCAGGCGTTTCTAT +
Preference number: 4 (lower is better)
Translates to: VTFLQFPTSSSSPSETTSWQTFA*ASRRFY
Trigger: ATAGAAACGCCTGGATGCCCAGGCAAAAGTTTGCCA...TGAGGTGGTCTCAGATGGAGATGAAGAACTTGTTGGGAACTGGAGAAAGGTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616513.1
CDS-3UTR CCA 90 bp TGTTGCCCAGTTCCAAAGTCGCTTCCACATTTTTGGGTATCTCTTCAGCAGCACCCCTTCCACAACACATaGGAATTCTGGGAGACACAA +
Preference number: 4 (lower is better)
Translates to: CCPVPKSLPHFWVSLQQHPFHNT*EFWETQ
Trigger: TTGTGTCTCCCAGAATTCCCATGTGTTGTGGAAGGG...GTGCTGCTGAAGAGATACCCAAAAATGTGGAAGCGACTTTGGAACTGGGCAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616513.1
CDS-3UTR CCA 90 bp CCATATCATTCTGCCCTGGCCCCTCCAAATCTCACGTCATCACATTTCAAAACCTCAATTACCTTCCCCTaGGTCCCTTCCACAACACAT +
Preference number: 4 (lower is better)
Translates to: PYHSALAPPNLTSSHFKTSITFP*VPSTTH
Trigger: ATGTGTTGTGGAAGGGACCCAGGGGAAGGTAATTGA...GGTTTTGAAATGTGATGACGTGAGATTTGGAGGGGCCAGGGCAGAATGATATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000616513.1
CDS-3UTR TCA 90 bp GCCCAGCGCTCTTTCAAAATGCCACCTTGCCATCTTACAATGCATTATGCTGGTGAAGTGAGGATACAGTaGATCTTCCACAAGATAGCG +
Preference number: 4 (lower is better)
Translates to: AQRSFKMPPCHLTMHYAGEVRIQ*IFHKIA
Trigger: CGCTATCTTGTGGAAGATTCACTGTATCCTCACTTC...ACCAGCATAATGCATTGTAAGATGGCAAGGTGGCATTTTGAAAGAGCGCTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR TCA 90 bp CCAGTACCTAGTATGGAAAGGATTGCTGGCAGCACCTTGGCCTCTACCACCCTAAAAAGCGTATCCCATTaGATCAATGTAAACATCAGG +
Preference number: 4 (lower is better)
Translates to: PVPSMERIAGSTLASTTLKSVSH*INVNIR
Trigger: CCTGATGTTTACATTGATTCAATGGGATACGCTTTT...TAGGGTGGTAGAGGCCAAGGTGCTGCCAGCAATCCTTTCCATACTAGGTACTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR TCA 90 bp GCCCAGCGCTCTTTCAAAATGCCACCTTGCCATCTTACAATGCATTATGCTGGTCTGATCTGCAATGGATaGTTCTTTTCCGGCCTAAAC +
Preference number: 4 (lower is better)
Translates to: AQRSFKMPPCHLTMHYAGLICNG*FFSGLN
Trigger: GTTTAGGCCGGAAAAGAATCATCCATTGCAGATCAG...ACCAGCATAATGCATTGTAAGATGGCAAGGTGGCATTTTGAAAGAGCGCTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR TCA 90 bp CTCCACTGCTGTGGGTTCAAAACAGCAGGCTTGGACCACTCAAAAATGACATCTCTGATCTGCAATGGATaGTTCTTTTCCGGCCTAAAC +
Preference number: 4 (lower is better)
Translates to: LHCCGFKTAGLDHSKMTSLICNG*FFSGLN
Trigger: GTTTAGGCCGGAAAAGAATCATCCATTGCAGATCAG...AGATGTCATTTTTGAGTGGTCCAAGCCTGCTGTTTTGAACCCACAGCAGTGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR TCA 90 bp GCCCAGCGCTCTTTCAAAATGCCACCTTGCCATCTTACAATGCATTATGCTGGTGTTATATCTCCTTCGTaGGGAACCACAATGTCAAGC +
Preference number: 4 (lower is better)
Translates to: AQRSFKMPPCHLTMHYAGVISPS*GTTMSS
Trigger: GCTTGACATTGTGGTTCCTCACGAAGGAGATATAAC...ACCAGCATAATGCATTGTAAGATGGCAAGGTGGCATTTTGAAAGAGCGCTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR TCA 90 bp GAAAGGATTGCTGGCAGCACCTTGGCCTCTACCACCCTACACACACCTATAAAGGTCACTTCAAATTCCTaGTCAGAGAATCTGCTTACA +
Preference number: 4 (lower is better)
Translates to: ERIAGSTLASTTLHTPIKVTSNS*SENLLT
Trigger: TGTAAGCAGATTCTCTGATCAGGAATTTGAAGTGAC...CTTTATAGGTGTGTGTAGGGTGGTAGAGGCCAAGGTGCTGCCAGCAATCCTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR TCA 90 bp ATGCTAGGGCTTAAGAAGAGGATGTTTGGTATGGAGGGTATGTGGGGCGAGATGTTCCCCAAAGGACAATaGCCAAACACACACATAAAG +
Preference number: 4 (lower is better)
Translates to: MLGLKKRMFGMEGMWGEMFPKGQ*PNTHIK
Trigger: CTTTATGTGTGTGTTTGGTCATTGTCCTTTGGGGAA...CATCTCGCCCCACATACCCTCCATACCAAACATCCTCTTCTTAAGCCCTAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649708.2
CDS-3UTR TCA 90 bp GTATACCAAGAATGGAAGCCGAAGGCTAGTCATCCATTTTCTTTTCAACACTTCGCTGGTCTCAACTGCTaGCCTCATGATCCACCCATC +
Preference number: 4 (lower is better)
Translates to: VYQEWKPKASHPFSFQHFAGLNC*PHDPPI
Trigger: GATGGGTGGATCATGAGGTCAGCAGTTGAGACCAGC...GAAGTGTTGAAAAGAAAATGGATGACTAGCCTTCGGCTTCCATTCTTGGTATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR TCA 90 bp CTGGTGGCTCAAAGCCAGATTCTCTGCAACCTGGTTCACATTCATCTCAGCAGCACATTGATGAATGACTaGGAGGAGACTGCAAAGAAA +
Preference number: 4 (lower is better)
Translates to: LVAQSQILCNLVHIHLSSTLMND*EETAKK
Trigger: TTTCTTTGCAGTCTCCTCTCAGTCATTCATCAATGT...GCTGCTGAGATGAATGTGAACCAGGTTGCAGAGAATCTGGCTTTGAGCCACCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR TCA 90 bp ACTGCTTGCCCAGCGCTCTTTCAAAATGCCACCTTGCCATCTTACAATGCATTAGGCCACATTGATGAATaGCTGAGAGGAGACTGCAAA +
Preference number: 4 (lower is better)
Translates to: TACPALFQNATLPSYNALGHIDE*LRGDCK
Trigger: TTTGCAGTCTCCTCTCAGTCATTCATCAATGTGGCC...TAATGCATTGTAAGATGGCAAGGTGGCATTTTGAAAGAGCGCTGGGCAAGCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR TCA 90 bp GAGGAATTAATAGTCATCCTGAAAGTTCTGCAGACAGACGCTAGCGGACAAACCGGCCACATTGATGAATaGCTGAGAGGAGACTGCAAA +
Preference number: 4 (lower is better)
Translates to: EELIVILKVLQTDASGQTGHIDE*LRGDCK
Trigger: TTTGCAGTCTCCTCTCAGTCATTCATCAATGTGGCC...GGTTTGTCCGCTAGCGTCTGTCTGCAGAACTTTCAGGATGACTATTAATTCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR GCA 90 bp GAGGAATTAATAGTCATCCTGAAAGTTCTGCAGACAGACGCTAGCGGACAAACCACATCAGGAACACACTaGATTAGAGCTTCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: EELIVILKVLQTDASGQTTSGTH*IRASQP
Trigger: TGGCTGGGAAGCTCTAATGCAGTGTGTTCCTGATGT...GGTTTGTCCGCTAGCGTCTGTCTGCAGAACTTTCAGGATGACTATTAATTCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR GCA 90 bp GAGGAATTAATAGTCATCCTGAAAGTTCTGCAGACAGACGCTAGCGGACAAACCGATAATTGTGCCAGCTaGCATACACTCCACAACTCC +
Preference number: 4 (lower is better)
Translates to: EELIVILKVLQTDASGQTDNCAS*HTLHNS
Trigger: GGAGTTGTGGAGTGTATGGCAGCTGGCACAATTATC...GGTTTGTCCGCTAGCGTCTGTCTGCAGAACTTTCAGGATGACTATTAATTCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR GCA 90 bp ACTGCTTGCCCAGCGCTCTTTCAAAATGCCACCTTGCCATCTTACAATGCATTAGATAATTGTGCCAGCTaGCATACACTCCACAACTCC +
Preference number: 4 (lower is better)
Translates to: TACPALFQNATLPSYNALDNCAS*HTLHNS
Trigger: GGAGTTGTGGAGTGTATGGCAGCTGGCACAATTATC...TAATGCATTGTAAGATGGCAAGGTGGCATTTTGAAAGAGCGCTGGGCAAGCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR GCA 90 bp GAAAGGATTGCTGGCAGCACCTTGGCCTCTACCACCCTACACACACCTATAAAGTTGGAGTCTCTTTTCTaGAGACATGGAAAGAATGTG +
Preference number: 4 (lower is better)
Translates to: ERIAGSTLASTTLHTPIKLESLF*RHGKNV
Trigger: CACATTCTTTCCATGTCTGCAGAAAAGAGACTCCAA...CTTTATAGGTGTGTGTAGGGTGGTAGAGGCCAAGGTGCTGCCAGCAATCCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR GCA 90 bp TCCCACCTCTTGACTGTATGCTTTGAGAACACGATTAAACAAGTCTGTTTAAAACTCCAGGGGAGTTCTTaGCTTCCAGCCACTGAGCGC +
Preference number: 4 (lower is better)
Translates to: SHLLTVCFENTIKQVCLKLQGSS*LPATER
Trigger: GCGCTCAGTGGCTGGAAGGCAAGAACTCCCCTGGAG...TTTTAAACAGACTTGTTTAATCGTGTTCTCAAAGCATACAGTCAAGAGGTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR GCA 90 bp TTTCCACAGATGATAGGAATGTCACTTCAAATTCCTGATCAGAGAATCTGCTTACTCCAGGGGAGTTCTTaGCTTCCAGCCACTGAGCGC +
Preference number: 4 (lower is better)
Translates to: FPQMIGMSLQIPDQRICLLQGSS*LPATER
Trigger: GCGCTCAGTGGCTGGAAGGCAAGAACTCCCCTGGAG...TAAGCAGATTCTCTGATCAGGAATTTGAAGTGACATTCCTATCATCTGTGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000523764.1
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681145.1
CDS-3UTR GCA 90 bp CTGGTGGCTCAAAGCCAGATTCTCTGCAACCTGGTTCACATTCATCTCAGCAGCTTCCATTTCTTCCAGTaGCACAGTTGGATTAACCTT +
Preference number: 4 (lower is better)
Translates to: LVAQSQILCNLVHIHLSSFHFFQ*HSWINL
Trigger: AAGGTTAATCCAACTGTGGCACTGGAAGAAATGGAA...GCTGCTGAGATGAATGTGAACCAGGTTGCAGAGAATCTGGCTTTGAGCCACCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000521508.2
ENST00000523764.1
ENST00000649340.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR GCA 90 bp GAAAGGATTGCTGGCAGCACCTTGGCCTCTACCACCCTACACACACCTATAAAGTTCCATTTCTTCCAGTaGCACAGTTGGATTAACCTT +
Preference number: 4 (lower is better)
Translates to: ERIAGSTLASTTLHTPIKFHFFQ*HSWINL
Trigger: AAGGTTAATCCAACTGTGGCACTGGAAGAAATGGAA...CTTTATAGGTGTGTGTAGGGTGGTAGAGGCCAAGGTGCTGCCAGCAATCCTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR GCA 90 bp AAATCTCCACTGCTGTGGGTTCAAAACAGCAGGCTTGGACCACTCAAAAATGACTTCTTCTGCCTCACTTaGAGAAACCTCATGAGCTGC +
Preference number: 4 (lower is better)
Translates to: KSPLLWVQNSRLGPLKNDFFCLT*RNLMSC
Trigger: GCAGCTCATGAGGTTTCTGCAAGTGAGGCAGAAGAA...GTCATTTTTGAGTGGTCCAAGCCTGCTGTTTTGAACCCACAGCAGTGGAGATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR GCA 90 bp GATGTTTGGTATGGAGGGTATGTGGGGCGAGATGGTGCAAGTCTACGTGACTTGGCAGTAGAAGGAAAGTaGCTTTATTTTTCAGCGCTA +
Preference number: 4 (lower is better)
Translates to: DVWYGGYVGRDGASLRDLAVEGK*LYFSAL
Trigger: TAGCGCTGAAAAATAAAGGCACTTTCCTTCTACTGC...CAAGTCACGTAGACTTGCACCATCTCGCCCCACATACCCTCCATACCAAACATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649708.2
CDS-3UTR GCA 90 bp AGAGCTTCCCAGCCAAGAAAAATGGATCCTAGACTTTGGCCCAGCAGTGTGAAGGATACCTACTTTTTCTaGAGGGCTCTTAAAGCACAC +
Preference number: 4 (lower is better)
Translates to: RASQPRKMDPRLWPSSVKDTYFF*RALKAH
Trigger: GTGTGCTTTAAGAGCCCTGCAGAAAAAGTAGGTATC...CTTCACACTGCTGGGCCAAAGTCTAGGATCCATTTTTCTTGGCTGGGAAGCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000681047.1
CDS-3UTR CCA 90 bp AAATCTCCACTGCTGTGGGTTCAAAACAGCAGGCTTGGACCACTCAAAAATGACGGCTCTGATCTGCAATaGATGATTCTTTTCCGGCCT +
Preference number: 4 (lower is better)
Translates to: KSPLLWVQNSRLGPLKNDGSDLQ*MILFRP
Trigger: AGGCCGGAAAAGAATCATCCATTGCAGATCAGAGCC...GTCATTTTTGAGTGGTCCAAGCCTGCTGTTTTGAACCCACAGCAGTGGAGATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR CCA 90 bp GAGGAATTAATAGTCATCCTGAAAGTTCTGCAGACAGACGCTAGCGGACAAACCCACCAGTACCTAGTATaGAAAGGATTGCTGGCAGCA +
Preference number: 4 (lower is better)
Translates to: EELIVILKVLQTDASGQTHQYLV*KGLLAA
Trigger: TGCTGCCAGCAATCCTTTCCATACTAGGTACTGGTG...GGTTTGTCCGCTAGCGTCTGTCTGCAGAACTTTCAGGATGACTATTAATTCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR CCA 90 bp CTCCACTGCTGTGGGTTCAAAACAGCAGGCTTGGACCACTCAAAAATGACATCTGAATCAGCCTGTGGATaGGGTCAATTCACTGAACTA +
Preference number: 4 (lower is better)
Translates to: LHCCGFKTAGLDHSKMTSESACG*GQFTEL
Trigger: TAGTTCAGTGAATTGACCCCATCCACAGGCTGATTC...AGATGTCATTTTTGAGTGGTCCAAGCCTGCTGTTTTGAACCCACAGCAGTGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR CCA 90 bp TCACTATCCGCATTTTGTTCAAAGCCATTCAACAAGTCTCTAGGATGTTCCAAAACCACTTTTTCCTCCTaGGCCTCCAGGCCTGCCATG +
Preference number: 4 (lower is better)
Translates to: SLSAFCSKPFNKSLGCSKTTFSS*ASRPAM
Trigger: CATGGCAGGCCTGGAGGCCCAGGAGGAAAAAGTGGT...TTTGGAACATCCTAGAGACTTGTTGAATGGCTTTGAACAAAATGCGGATAGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000616513.1
CDS-3UTR TCA 90 bp GAAAGGATTGCTGGCAGCACCTTGGCCTCTACCACCCTACACACACCTATAAAGAAAAGCGTATCCCATTaGATCAATGTAAACATCAGG +
Preference number: 4 (lower is better)
Translates to: ERIAGSTLASTTLHTPIKKSVSH*INVNIR
Trigger: CCTGATGTTTACATTGATTCAATGGGATACGCTTTT...CTTTATAGGTGTGTGTAGGGTGGTAGAGGCCAAGGTGCTGCCAGCAATCCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR TCA 90 bp ACTGCTTGCCCAGCGCTCTTTCAAAATGCCACCTTGCCATCTTACAATGCATTACTGATCTGCAATGGATaGTTCTTTTCCGGCCTAAAC +
Preference number: 4 (lower is better)
Translates to: TACPALFQNATLPSYNALLICNG*FFSGLN
Trigger: GTTTAGGCCGGAAAAGAATCATCCATTGCAGATCAG...TAATGCATTGTAAGATGGCAAGGTGGCATTTTGAAAGAGCGCTGGGCAAGCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR TCA 90 bp GAGGAATTAATAGTCATCCTGAAAGTTCTGCAGACAGACGCTAGCGGACAAACCGTTATATCTCCTTCGTaGGGAACCACAATGTCAAGC +
Preference number: 4 (lower is better)
Translates to: EELIVILKVLQTDASGQTVISPS*GTTMSS
Trigger: GCTTGACATTGTGGTTCCTCACGAAGGAGATATAAC...GGTTTGTCCGCTAGCGTCTGTCTGCAGAACTTTCAGGATGACTATTAATTCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR TCA 90 bp CAGCCAGAAAGCCAGTTATATCTCCTTCGTGAGGAACCACAATGTCAAGCTTTGGTTATATCTCCTTCGTaGGGAACCACAATGTCAAGC +
Preference number: 4 (lower is better)
Translates to: QPESQLYLLREEPQCQALVISPS*GTTMSS
Trigger: GCTTGACATTGTGGTTCCTCACGAAGGAGATATAAC...CAAAGCTTGACATTGTGGTTCCTCACGAAGGAGATATAACTGGCTTTCTGGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000650049.2
ENST00000679359.1
ENST00000681047.1
ENST00000681145.1
CDS-3UTR TCA 90 bp GCCCAGCGCTCTTTCAAAATGCCACCTTGCCATCTTACAATGCATTATGCTGGTAAGTTCCACATACAATaGGCCCAGGGAAGAATAATG +
Preference number: 4 (lower is better)
Translates to: AQRSFKMPPCHLTMHYAGKFHIQ*AQGRIM
Trigger: CATTATTCTTCCCTGGGCTCATTGTATGTGGAACTT...ACCAGCATAATGCATTGTAAGATGGCAAGGTGGCATTTTGAAAGAGCGCTGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
CDS-3UTR TCA 90 bp GAATGTCACTTCAAATTCCTGATCAGAGAATCTGCTTACAGATGCACGAGCACTTGTCAGAACATCCTGTaGCTGACCCTCTGTTTGCTG +
Preference number: 4 (lower is better)
Translates to: ECHFKFLIRESAYRCTSTCQNIL*LTLCLL
Trigger: CAGCAAACAGAGGGTCAGTCACAGGATGTTCTGACA...AGTGCTCGTGCATCTGTAAGCAGATTCTCTGATCAGGAATTTGAAGTGACATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
CDS-3UTR TCA 90 bp GAAAGGATTGCTGGCAGCACCTTGGCCTCTACCACCCTACACACACCTATAAAGATCTTGATTCTTTCATaGAACAGCTTTGTGACACTG +
Preference number: 4 (lower is better)
Translates to: ERIAGSTLASTTLHTPIKILILS*NSFVTL
Trigger: CAGTGTCACAAAGCTGTTTCATGAAAGAATCAAGAT...CTTTATAGGTGTGTGTAGGGTGGTAGAGGCCAAGGTGCTGCCAGCAATCCTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR TCA 90 bp CTGGTGGCTCAAAGCCAGATTCTCTGCAACCTGGTTCACATTCATCTCAGCAGCTGGACCACTCAAAAATaGCATCTGAGAGGAATTAAT +
Preference number: 4 (lower is better)
Translates to: LVAQSQILCNLVHIHLSSWTTQK*HLRGIN
Trigger: ATTAATTCCTCTCAGATGTCATTTTTGAGTGGTCCA...GCTGCTGAGATGAATGTGAACCAGGTTGCAGAGAATCTGGCTTTGAGCCACCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR TCA 90 bp CCTTTCTCCAGTTCCCAACAAGTTCTTCATCTCCATCTGAGACCACCTCAGCCTAGGCTGCAAATTTTCTaGACTTTTATGCTCTGTTCC +
Preference number: 4 (lower is better)
Translates to: PFSSSQQVLHLHLRPPQPRLQIF*TFMLCS
Trigger: GGAACAGAGCATAAAAGTTCAGAAAATTTGCAGCCT...AGGCTGAGGTGGTCTCAGATGGAGATGAAGAACTTGTTGGGAACTGGAGAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616513.1
CDS-3UTR TCA 90 bp TGCAGTAGAAGGAAAGTGCCTTTATTTTTCAGCGCTAGCAGTGGGGAGATGGTTCTCCGCTTGCAAAATTaGATAACAAGGACAAGGTGC +
Preference number: 4 (lower is better)
Translates to: CSRRKVPLFFSASSGEMVLRLQN*ITRTRC
Trigger: GCACCTTGTCCTTGTTATTCAATTTTGCAAGCGGAG...AACCATCTCCCCACTGCTAGCGCTGAAAAATAAAGGCACTTTCCTTCTACTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000649708.2
CDS-3UTR GCA 90 bp ATAATTGTGCCAGCTGCCATACACTCCACAACTCCAATCCCAAAATGCTCGTTCACTCCAATCCCAAAATaGTCGTTCCACATGGTATGC +
Preference number: 4 (lower is better)
Translates to: IIVPAAIHSTTPIPKCSFTPIPK*SFHMVC
Trigger: GCATACCATGTGGAACGAGCATTTTGGGATTGGAGT...GAACGAGCATTTTGGGATTGGAGTTGTGGAGTGTATGGCAGCTGGCACAATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000650049.2
ENST00000679359.1
ENST00000681047.1
CDS-3UTR GCA 90 bp ATAGTCTTCTTCACTCTCAGCCAGAAAGCCAGTTATATCTCCTTCGTGAGGAACGATAATTGTGCCAGCTaGCATACACTCCACAACTCC +
Preference number: 4 (lower is better)
Translates to: IVFFTLSQKASYISFVRNDNCAS*HTLHNS
Trigger: GGAGTTGTGGAGTGTATGGCAGCTGGCACAATTATC...GTTCCTCACGAAGGAGATATAACTGGCTTTCTGGCTGAGAGTGAAGAAGACTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000523764.1
ENST00000650049.2
ENST00000679359.1
ENST00000681047.1
CDS-3UTR GCA 90 bp GGAATGTCACTTCAAATTCCTGATCAGAGAATCTGCTTACAGATGCACGAGCACGATAATTGTGCCAGCTaGCATACACTCCACAACTCC +
Preference number: 4 (lower is better)
Translates to: GMSLQIPDQRICLQMHEHDNCAS*HTLHNS
Trigger: GGAGTTGTGGAGTGTATGGCAGCTGGCACAATTATC...GTGCTCGTGCATCTGTAAGCAGATTCTCTGATCAGGAATTTGAAGTGACATTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000523764.1
ENST00000650049.2
ENST00000679359.1
ENST00000681047.1
CDS-3UTR GCA 90 bp CTCCACTGCTGTGGGTTCAAAACAGCAGGCTTGGACCACTCAAAAATGACATCTCAAAGCCAGATTCTCTaGAACCTGGTTCACATTCAT +
Preference number: 4 (lower is better)
Translates to: LHCCGFKTAGLDHSKMTSQSQIL*NLVHIH
Trigger: ATGAATGTGAACCAGGTTGCAGAGAATCTGGCTTTG...AGATGTCATTTTTGAGTGGTCCAAGCCTGCTGTTTTGAACCCACAGCAGTGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR GCA 90 bp CTGGTGGCTCAAAGCCAGATTCTCTGCAACCTGGTTCACATTCATCTCAGCAGCCACCTCTTGACTGTATaGTTTGAGAACACGATTAAA +
Preference number: 4 (lower is better)
Translates to: LVAQSQILCNLVHIHLSSHLLTV*FENTIK
Trigger: TTTAATCGTGTTCTCAAAGCATACAGTCAAGAGGTG...GCTGCTGAGATGAATGTGAACCAGGTTGCAGAGAATCTGGCTTTGAGCCACCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR GCA 90 bp GAAAGGATTGCTGGCAGCACCTTGGCCTCTACCACCCTACACACACCTATAAAGCACCTCTTGACTGTATaGTTTGAGAACACGATTAAA +
Preference number: 4 (lower is better)
Translates to: ERIAGSTLASTTLHTPIKHLLTV*FENTIK
Trigger: TTTAATCGTGTTCTCAAAGCATACAGTCAAGAGGTG...CTTTATAGGTGTGTGTAGGGTGGTAGAGGCCAAGGTGCTGCCAGCAATCCTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR GCA 90 bp CCAGTACCTAGTATGGAAAGGATTGCTGGCAGCACCTTGGCCTCTACCACCCTATTCAAAATGCCACCTTaGCATCTTACAATGCATTAT +
Preference number: 4 (lower is better)
Translates to: PVPSMERIAGSTLASTTLFKMPP*HLTMHY
Trigger: ATAATGCATTGTAAGATGGCAAGGTGGCATTTTGAA...TAGGGTGGTAGAGGCCAAGGTGCTGCCAGCAATCCTTTCCATACTAGGTACTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR GCA 90 bp GCCCAGCGCTCTTTCAAAATGCCACCTTGCCATCTTACAATGCATTATGCTGGTACAACAATCCCAAAATaGTCGTTCCACATGGTATGC +
Preference number: 4 (lower is better)
Translates to: AQRSFKMPPCHLTMHYAGTTIPK*SFHMVC
Trigger: GCATACCATGTGGAACGAGCATTTTGGGATTGTTGT...ACCAGCATAATGCATTGTAAGATGGCAAGGTGGCATTTTGAAAGAGCGCTGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649340.2
CDS-3UTR GCA 90 bp GCCCAGCGCTCTTTCAAAATGCCACCTTGCCATCTTACAATGCATTATGCTGGTGATAATTGTGCCAGCTaGCATACACTCCACAACAAT +
Preference number: 4 (lower is better)
Translates to: AQRSFKMPPCHLTMHYAGDNCAS*HTLHNN
Trigger: ATTGTTGTGGAGTGTATGGCAGCTGGCACAATTATC...ACCAGCATAATGCATTGTAAGATGGCAAGGTGGCATTTTGAAAGAGCGCTGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649340.2
CDS-3UTR CCA 90 bp TGCCCAGCGCTCTTTCAAAATGCCACCTTGCCATCTTACAATGCATTATGCTGGGACAGCCTTCTCAGTTaGTTTACCCTAAGTTCATCA +
Preference number: 4 (lower is better)
Translates to: CPALFQNATLPSYNALCWDSLLS*FTLSSS
Trigger: TGATGAACTTAGGGTAAACCAACTGAGAAGGCTGTC...CCAGCATAATGCATTGTAAGATGGCAAGGTGGCATTTTGAAAGAGCGCTGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR CCA 90 bp TGCCCAGCGCTCTTTCAAAATGCCACCTTGCCATCTTACAATGCATTATGCTGGAATGCTCGTTCCACATaGTATGCAGACCAATTGTTG +
Preference number: 4 (lower is better)
Translates to: CPALFQNATLPSYNALCWNARST*YADQLL
Trigger: CAACAATTGGTCTGCATACCATGTGGAACGAGCATT...CCAGCATAATGCATTGTAAGATGGCAAGGTGGCATTTTGAAAGAGCGCTGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR CCA 90 bp ACTCTCAGCCAGAAAGCCAGTTATATCTCCTTCGTGAGGAACCACAATGTCAAGGAATCAGCCTGTGGATaGGGTCAATTCACTGAACTA +
Preference number: 4 (lower is better)
Translates to: TLSQKASYISFVRNHNVKESACG*GQFTEL
Trigger: TAGTTCAGTGAATTGACCCCATCCACAGGCTGATTC...CTTGACATTGTGGTTCCTCACGAAGGAGATATAACTGGCTTTCTGGCTGAGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679359.1
ENST00000681047.1
CDS-3UTR CCA 90 bp GAGGAATTAATAGTCATCCTGAAAGTTCTGCAGACAGACGCTAGCGGACAAACCGAATCAGCCTGTGGATaGGGTCAATTCACTGAACTA +
Preference number: 4 (lower is better)
Translates to: EELIVILKVLQTDASGQTESACG*GQFTEL
Trigger: TAGTTCAGTGAATTGACCCCATCCACAGGCTGATTC...GGTTTGTCCGCTAGCGTCTGTCTGCAGAACTTTCAGGATGACTATTAATTCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR CCA 90 bp GAGGAATTAATAGTCATCCTGAAAGTTCTGCAGACAGACGCTAGCGGACAAACCAAATCTCCACTGCTGTaGGTTCAAAACAGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: EELIVILKVLQTDASGQTKSPLL*VQNSRL
Trigger: AAGCCTGCTGTTTTGAACCCACAGCAGTGGAGATTT...GGTTTGTCCGCTAGCGTCTGTCTGCAGAACTTTCAGGATGACTATTAATTCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR CCA 90 bp TTCCAGCCTCTGCCTGTTGCCCAGTTCCAAAGTCGCTTCCACATTTTTGGGTATTACAGCTGTTCCAAATaGGAGAAATTGGCCAAAACA +
Preference number: 4 (lower is better)
Translates to: FQPLPVAQFQSRFHIFGYYSCSK*EKLAKT
Trigger: TGTTTTGGCCAATTTCTCCCATTTGGAACAGCTGTA...ATACCCAAAAATGTGGAAGCGACTTTGGAACTGGGCAACAGGCAGAGGCTGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616513.1
3UTR CAA 72 bp TCATCTCCATCTGAGACCACCTCAGCCTGGATTTCGTaGTCCATATCACTATCCGCATTTTGTTCAAAGCCA +
Preference number: 4 (lower is better)
Translates to: SSPSETTSAWIS*SISLSAFCSKP
Trigger: TGGCTTTGAACAAAATGCGGATAGTGATATGGACAACGAAATCCAGGCTGAGGTGGTCTCAGATGGAGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616513.1
CDS-3UTR TCA 90 bp GACAGCATAAACAAAAACAATTTTCACCAGTACCTAGTATGGAAAGGATTGCTGTGCTTCAGGATACCCTaGGAGACTGAGAGCCGAGAC +
Preference number: 4 (lower is better)
Translates to: DSINKNNFHQYLVWKGLLCFRIP*ETESRD
Trigger: GTCTCGGCTCTCAGTCTCTCAGGGTATCCTGAAGCA...CAGCAATCCTTTCCATACTAGGTACTGGTGAAAATTGTTTTTGTTTATGCTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679359.1
CDS-3UTR TCA 90 bp GAGGAATTAATAGTCATCCTGAAAGTTCTGCAGACAGACGCTAGCGGACAAACCCCTTCTAGTATCTGTTaGCCGTTGACATTAACATCG +
Preference number: 4 (lower is better)
Translates to: EELIVILKVLQTDASGQTPSSIC*PLTLTS
Trigger: CGATGTTAATGTCAACGGTCAACAGATACTAGAAGG...GGTTTGTCCGCTAGCGTCTGTCTGCAGAACTTTCAGGATGACTATTAATTCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR TCA 90 bp AGTCTTCTTCACTCTCAGCCAGAAAGCCAGTTATATCTCCTTCGTGAGGAACCACCTTCTAGTATCTGTTaGCCGTTGACATTAACATCG +
Preference number: 4 (lower is better)
Translates to: SLLHSQPESQLYLLREEPPSSIC*PLTLTS
Trigger: CGATGTTAATGTCAACGGTCAACAGATACTAGAAGG...TGGTTCCTCACGAAGGAGATATAACTGGCTTTCTGGCTGAGAGTGAAGAAGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679359.1
ENST00000681047.1
CDS-3UTR TCA 90 bp CTCCACTGCTGTGGGTTCAAAACAGCAGGCTTGGACCACTCAAAAATGACATCTTTTAAGCGAAGGAGGTaGCTCAACCATCTTCTTATT +
Preference number: 4 (lower is better)
Translates to: LHCCGFKTAGLDHSKMTSFKRRR*LNHLLI
Trigger: AATAAGAAGATGGTTGAGTCACCTCCTTCGCTTAAA...AGATGTCATTTTTGAGTGGTCCAAGCCTGCTGTTTTGAACCCACAGCAGTGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR TCA 90 bp TGCCCAGCGCTCTTTCAAAATGCCACCTTGCCATCTTACAATGCATTATGCTGGTTTAAGCGAAGGAGGTaGCTCAACCATCTTCTTATT +
Preference number: 4 (lower is better)
Translates to: CPALFQNATLPSYNALCWFKRRR*LNHLLI
Trigger: AATAAGAAGATGGTTGAGTCACCTCCTTCGCTTAAA...CCAGCATAATGCATTGTAAGATGGCAAGGTGGCATTTTGAAAGAGCGCTGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR TCA 90 bp TGCCCAGCGCTCTTTCAAAATGCCACCTTGCCATCTTACAATGCATTATGCTGGGTCACTTCAAATTCCTaGTCAGAGAATCTGCTTACA +
Preference number: 4 (lower is better)
Translates to: CPALFQNATLPSYNALCWVTSNS*SENLLT
Trigger: TGTAAGCAGATTCTCTGATCAGGAATTTGAAGTGAC...CCAGCATAATGCATTGTAAGATGGCAAGGTGGCATTTTGAAAGAGCGCTGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR TCA 90 bp ACTCTCAGCCAGAAAGCCAGTTATATCTCCTTCGTGAGGAACCACAATGTCAAGAAGTTCCACATACAATaGGCCCAGGGAAGAATAATG +
Preference number: 4 (lower is better)
Translates to: TLSQKASYISFVRNHNVKKFHIQ*AQGRIM
Trigger: CATTATTCTTCCCTGGGCTCATTGTATGTGGAACTT...CTTGACATTGTGGTTCCTCACGAAGGAGATATAACTGGCTTTCTGGCTGAGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000650049.2
ENST00000679359.1
ENST00000681047.1
ENST00000681145.1
CDS-3UTR TCA 90 bp GAAAACTTTTTCTTCCTTCACTACATCCTCAGGAATAAGGCAATTGAGTGGATATGGAATCAGGGCCCCTaGCTGTCACTTCTCCAGCTA +
Preference number: 4 (lower is better)
Translates to: ENFFFLHYILRNKAIEWIWNQGP*LSLLQL
Trigger: TAGCTGGAGAAGTGACAGTCAGGGGCCCTGATTCCA...TATCCACTCAATTGCCTTATTCCTGAGGATGTAGTGAAGGAAGAAAAAGTTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR TCA 90 bp AGACATGGAAAGAATGTGAGCGATAGTTTCAGCATAGTCTTCTTCACTCTCAGCGTCAGTCCCACCTCTTaGCTGTATGCTTTGAGAACA +
Preference number: 4 (lower is better)
Translates to: RHGKNVSDSFSIVFFTLSVSPTS*LYALRT
Trigger: TGTTCTCAAAGCATACAGTCAAGAGGTGGGACTGAC...GCTGAGAGTGAAGAAGACTATGCTGAAACTATCGCTCACATTCTTTCCATGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
CDS-3UTR TCA 90 bp GACAGCATAAACAAAAACAATTTTCACCAGTACCTAGTATGGAAAGGATTGCTGGCTGGTCTCAACTGCTaGCCTCATGATCCACCCATC +
Preference number: 4 (lower is better)
Translates to: DSINKNNFHQYLVWKGLLAGLNC*PHDPPI
Trigger: GATGGGTGGATCATGAGGTCAGCAGTTGAGACCAGC...CAGCAATCCTTTCCATACTAGGTACTGGTGAAAATTGTTTTTGTTTATGCTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR TCA 90 bp GTATACCAAGAATGGAAGCCGAAGGCTAGTCATCCATTTTCTTTTCAACACTTCCCCTTAACACAAAGATaGATCAGCCTGTGGATGGGG +
Preference number: 4 (lower is better)
Translates to: VYQEWKPKASHPFSFQHFPLTQR*ISLWMG
Trigger: CCCCATCCACAGGCTGATTCATCTTTGTGTTAAGGG...GAAGTGTTGAAAAGAAAATGGATGACTAGCCTTCGGCTTCCATTCTTGGTATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR TCA 90 bp TCATCTCTAACAAAAAGTTACAATGGTGTGTCAGAACATCCTGTGACTGACCCTTGTCAGAACATCCTGTaGCTGACCCTCTGTTTGCTG +
Preference number: 4 (lower is better)
Translates to: SSLTKSYNGVSEHPVTDPCQNIL*LTLCLL
Trigger: CAGCAAACAGAGGGTCAGTCACAGGATGTTCTGACA...AGGGTCAGTCACAGGATGTTCTGACACACCATTGTAACTTTTTGTTAGAGATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR GCA 90 bp GAATGTCACTTCAAATTCCTGATCAGAGAATCTGCTTACAGATGCACGAGCACTGATAATTGTGCCAGCTaGCATACACTCCACAACTCC +
Preference number: 4 (lower is better)
Translates to: ECHFKFLIRESAYRCTSTDNCAS*HTLHNS
Trigger: GGAGTTGTGGAGTGTATGGCAGCTGGCACAATTATC...AGTGCTCGTGCATCTGTAAGCAGATTCTCTGATCAGGAATTTGAAGTGACATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000523764.1
ENST00000650049.2
ENST00000679359.1
ENST00000681047.1
CDS-3UTR GCA 90 bp GCCCAGCGCTCTTTCAAAATGCCACCTTGCCATCTTACAATGCATTATGCTGGTGAATCTGCTTACAGATaGACGAGCACTTTTTCTGAT +
Preference number: 4 (lower is better)
Translates to: AQRSFKMPPCHLTMHYAGESAYR*TSTFSD
Trigger: ATCAGAAAAAGTGCTCGTGCATCTGTAAGCAGATTC...ACCAGCATAATGCATTGTAAGATGGCAAGGTGGCATTTTGAAAGAGCGCTGGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR GCA 90 bp GAATGTCACTTCAAATTCCTGATCAGAGAATCTGCTTACAGATGCACGAGCACTCCTGATCAGAGAATCTaGTTACAGATGCACGAGCAC +
Preference number: 4 (lower is better)
Translates to: ECHFKFLIRESAYRCTSTPDQRI*LQMHEH
Trigger: GTGCTCGTGCATCTGTAAGCAGATTCTCTGATCAGG...AGTGCTCGTGCATCTGTAAGCAGATTCTCTGATCAGGAATTTGAAGTGACATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000523764.1
ENST00000650049.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681145.1
CDS-3UTR GCA 90 bp AGGTGTGAGACACCGCACCCAGCCCTTAACTGTCGTAATTTTCAAAGTAGTTTCCAAAGCCAGATTCTCTaGAACCTGGTTCACATTCAT +
Preference number: 4 (lower is better)
Translates to: RCETPHPALNCRNFQSSFQSQIL*NLVHIH
Trigger: ATGAATGTGAACCAGGTTGCAGAGAATCTGGCTTTG...GAAACTACTTTGAAAATTACGACAGTTAAGGGCTGGGTGCGGTGTCTCACACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR GCA 90 bp GAATGTCACTTCAAATTCCTGATCAGAGAATCTGCTTACAGATGCACGAGCACTTTCTTCTGCCTCACTTaGAGAAACCTCATGAGCTGC +
Preference number: 4 (lower is better)
Translates to: ECHFKFLIRESAYRCTSTFFCLT*RNLMSC
Trigger: GCAGCTCATGAGGTTTCTGCAAGTGAGGCAGAAGAA...AGTGCTCGTGCATCTGTAAGCAGATTCTCTGATCAGGAATTTGAAGTGACATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
CDS-3UTR GCA 90 bp AAATCTCCACTGCTGTGGGTTCAAAACAGCAGGCTTGGACCACTCAAAAATGACGTAGCCCACATCCTCTaGTTTTATGGGCTTAATGAT +
Preference number: 4 (lower is better)
Translates to: KSPLLWVQNSRLGPLKNDVAHIL*FYGLND
Trigger: ATCATTAAGCCCATAAAAGCAGAGGATGTGGGCTAC...GTCATTTTTGAGTGGTCCAAGCCTGCTGTTTTGAACCCACAGCAGTGGAGATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR GCA 90 bp GAAAGGATTGCTGGCAGCACCTTGGCCTCTACCACCCTACACACACCTATAAAGTTCAAAATGCCACCTTaGCATCTTACAATGCATTAT +
Preference number: 4 (lower is better)
Translates to: ERIAGSTLASTTLHTPIKFKMPP*HLTMHY
Trigger: ATAATGCATTGTAAGATGGCAAGGTGGCATTTTGAA...CTTTATAGGTGTGTGTAGGGTGGTAGAGGCCAAGGTGCTGCCAGCAATCCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR GCA 90 bp CTCCACTGCTGTGGGTTCAAAACAGCAGGCTTGGACCACTCAAAAATGACATCTAATACAAATCTCCACTaGTGTGGGTTCAAAACAGCA +
Preference number: 4 (lower is better)
Translates to: LHCCGFKTAGLDHSKMTSNTNLH*CGFKTA
Trigger: TGCTGTTTTGAACCCACAGCAGTGGAGATTTGTATT...AGATGTCATTTTTGAGTGGTCCAAGCCTGCTGTTTTGAACCCACAGCAGTGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR CCA 90 bp CTCCACTGCTGTGGGTTCAAAACAGCAGGCTTGGACCACTCAAAAATGACATCTCTGCACATCACAAGGTaGATAAACAATGTTAGTGCA +
Preference number: 4 (lower is better)
Translates to: LHCCGFKTAGLDHSKMTSLHITR*INNVSA
Trigger: TGCACTAACATTGTTTATCCACCTTGTGATGTGCAG...AGATGTCATTTTTGAGTGGTCCAAGCCTGCTGTTTTGAACCCACAGCAGTGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR CCA 90 bp GCCCAGCGCTCTTTCAAAATGCCACCTTGCCATCTTACAATGCATTATGCTGGTCTGCACATCACAAGGTaGATAAACAATGTTAGTGCA +
Preference number: 4 (lower is better)
Translates to: AQRSFKMPPCHLTMHYAGLHITR*INNVSA
Trigger: TGCACTAACATTGTTTATCCACCTTGTGATGTGCAG...ACCAGCATAATGCATTGTAAGATGGCAAGGTGGCATTTTGAAAGAGCGCTGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR CCA 90 bp AGGTGTGAGACACCGCACCCAGCCCTTAACTGTCGTAATTTTCAAAGTAGTTTCGACAGCCTTCTCAGTTaGTTTACCCTAAGTTCATCA +
Preference number: 4 (lower is better)
Translates to: RCETPHPALNCRNFQSSFDSLLS*FTLSSS
Trigger: TGATGAACTTAGGGTAAACCAACTGAGAAGGCTGTC...GAAACTACTTTGAAAATTACGACAGTTAAGGGCTGGGTGCGGTGTCTCACACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR CCA 90 bp ACTCTCAGCCAGAAAGCCAGTTATATCTCCTTCGTGAGGAACCACAATGTCAAGAATGCTCGTTCCACATaGTATGCAGACCAATTGTTG +
Preference number: 4 (lower is better)
Translates to: TLSQKASYISFVRNHNVKNARST*YADQLL
Trigger: CAACAATTGGTCTGCATACCATGTGGAACGAGCATT...CTTGACATTGTGGTTCCTCACGAAGGAGATATAACTGGCTTTCTGGCTGAGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000650049.2
ENST00000679359.1
ENST00000681047.1
CDS-3UTR CCA 90 bp GAGGAATTAATAGTCATCCTGAAAGTTCTGCAGACAGACGCTAGCGGACAAACCAATGCTCGTTCCACATaGTATGCAGACCAATTGTTG +
Preference number: 4 (lower is better)
Translates to: EELIVILKVLQTDASGQTNARST*YADQLL
Trigger: CAACAATTGGTCTGCATACCATGTGGAACGAGCATT...GGTTTGTCCGCTAGCGTCTGTCTGCAGAACTTTCAGGATGACTATTAATTCCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR CCA 90 bp AAATCTCCACTGCTGTGGGTTCAAAACAGCAGGCTTGGACCACTCAAAAATGACCATGTATACCAAGAATaGAAGCCGAAGGCTAGTCAT +
Preference number: 4 (lower is better)
Translates to: KSPLLWVQNSRLGPLKNDHVYQE*KPKASH
Trigger: ATGACTAGCCTTCGGCTTCCATTCTTGGTATACATG...GTCATTTTTGAGTGGTCCAAGCCTGCTGTTTTGAACCCACAGCAGTGGAGATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR CCA 90 bp AAATCTCCACTGCTGTGGGTTCAAAACAGCAGGCTTGGACCACTCAAAAATGACGCTTTAATGAGAAACTaGCGTCTTTTCTTGGCACTG +
Preference number: 4 (lower is better)
Translates to: KSPLLWVQNSRLGPLKNDALMRN*RLFLAL
Trigger: CAGTGCCAAGAAAAGACGCCAGTTTCTCATTAAAGC...GTCATTTTTGAGTGGTCCAAGCCTGCTGTTTTGAACCCACAGCAGTGGAGATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR CCA 90 bp GACAGCATAAACAAAAACAATTTTCACCAGTACCTAGTATGGAAAGGATTGCTGTTGCTGGCAGCACCTTaGCCTCTACCACCCTACACA +
Preference number: 4 (lower is better)
Translates to: DSINKNNFHQYLVWKGLLLLAAP*PLPPYT
Trigger: TGTGTAGGGTGGTAGAGGCCAAGGTGCTGCCAGCAA...CAGCAATCCTTTCCATACTAGGTACTGGTGAAAATTGTTTTTGTTTATGCTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR CCA 90 bp CCATATCATTCTGCCCTGGCCCCTCCAAATCTCACGTCATCACATTTCAAAACCAACACATGGGAATTCTaGGAGACACAATTCAAACTG +
Preference number: 4 (lower is better)
Translates to: PYHSALAPPNLTSSHFKTNTWEF*ETQFKL
Trigger: CAGTTTGAATTGTGTCTCCCAGAATTCCCATGTGTT...GGTTTTGAAATGTGATGACGTGAGATTTGGAGGGGCCAGGGCAGAATGATATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616513.1
CDS-3UTR TCA 90 bp GAAGGTGCATTAAATTTATACCAATTCCTAGCTACTGGCCTAGTAACTAACAATGATACCCTGAGAGACTaGGAGCCGAGACTGCATCAC +
Preference number: 4 (lower is better)
Translates to: EGALNLYQFLATGLVTNNDTLRD*EPRLHH
Trigger: GTGATGCAGTCTCGGCTCTCAGTCTCTCAGGGTATC...ATTGTTAGTTACTAGGCCAGTAGCTAGGAATTGGTATAAATTTAATGCACCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679359.1
CDS-3UTR TCA 90 bp ATGATAGGAATGTCACTTCAAATTCCTGATCAGAGAATCTGCTTACAGATGCACCCCAGCAGTGTGAAGTaGGGATACAGTGAATCTTCC +
Preference number: 4 (lower is better)
Translates to: MIGMSLQIPDQRICLQMHPSSVK*GYSESS
Trigger: GGAAGATTCACTGTATCCTCACTTCACACTGCTGGG...GTGCATCTGTAAGCAGATTCTCTGATCAGGAATTTGAAGTGACATTCCTATCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679359.1
ENST00000681047.1
CDS-3UTR TCA 90 bp AGACATGGAAAGAATGTGAGCGATAGTTTCAGCATAGTCTTCTTCACTCTCAGCGTTATATCTCCTTCGTaGGGAACCACAATGTCAAGC +
Preference number: 4 (lower is better)
Translates to: RHGKNVSDSFSIVFFTLSVISPS*GTTMSS
Trigger: GCTTGACATTGTGGTTCCTCACGAAGGAGATATAAC...GCTGAGAGTGAAGAAGACTATGCTGAAACTATCGCTCACATTCTTTCCATGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000523764.1
ENST00000650049.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681145.1
CDS-3UTR TCA 90 bp ACTCTCAGCCAGAAAGCCAGTTATATCTCCTTCGTGAGGAACCACAATGTCAAGGTCACTTCAAATTCCTaGTCAGAGAATCTGCTTACA +
Preference number: 4 (lower is better)
Translates to: TLSQKASYISFVRNHNVKVTSNS*SENLLT
Trigger: TGTAAGCAGATTCTCTGATCAGGAATTTGAAGTGAC...CTTGACATTGTGGTTCCTCACGAAGGAGATATAACTGGCTTTCTGGCTGAGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000650049.2
ENST00000679359.1
ENST00000681047.1
ENST00000681145.1
CDS-3UTR TCA 90 bp ACTGCTTGCCCAGCGCTCTTTCAAAATGCCACCTTGCCATCTTACAATGCATTAGTCACTTCAAATTCCTaGTCAGAGAATCTGCTTACA +
Preference number: 4 (lower is better)
Translates to: TACPALFQNATLPSYNALVTSNS*SENLLT
Trigger: TGTAAGCAGATTCTCTGATCAGGAATTTGAAGTGAC...TAATGCATTGTAAGATGGCAAGGTGGCATTTTGAAAGAGCGCTGGGCAAGCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR TCA 90 bp ATAATTGTGCCAGCTGCCATACACTCCACAACTCCAATCCCAAAATGCTCGTTCGTCACTTCAAATTCCTaGTCAGAGAATCTGCTTACA +
Preference number: 4 (lower is better)
Translates to: IIVPAAIHSTTPIPKCSFVTSNS*SENLLT
Trigger: TGTAAGCAGATTCTCTGATCAGGAATTTGAAGTGAC...GAACGAGCATTTTGGGATTGGAGTTGTGGAGTGTATGGCAGCTGGCACAATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000650049.2
ENST00000679359.1
ENST00000681047.1
CDS-3UTR TCA 90 bp GGAATGTCACTTCAAATTCCTGATCAGAGAATCTGCTTACAGATGCACGAGCACTTCCCCAAAGGACAATaGCCAAACACACACATAAAG +
Preference number: 4 (lower is better)
Translates to: GMSLQIPDQRICLQMHEHFPKGQ*PNTHIK
Trigger: CTTTATGTGTGTGTTTGGTCATTGTCCTTTGGGGAA...GTGCTCGTGCATCTGTAAGCAGATTCTCTGATCAGGAATTTGAAGTGACATTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000650049.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681145.1
CDS-3UTR TCA 90 bp AGAGAATCTGCTTACAGATGCACGAGCACTTTTTCTGATTTGGAGTCTCTTTTCGGCCACATTGATGAATaGCTGAGAGGAGACTGCAAA +
Preference number: 4 (lower is better)
Translates to: RESAYRCTSTFSDLESLFGHIDE*LRGDCK
Trigger: TTTGCAGTCTCCTCTCAGTCATTCATCAATGTGGCC...GAAAAGAGACTCCAAATCAGAAAAAGTGCTCGTGCATCTGTAAGCAGATTCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
CDS-3UTR TCA 90 bp TCACTATCCGCATTTTGTTCAAAGCCATTCAACAAGTCTCTAGGATGTTCCAAATTCTTCATCTCCATCTaGGACCACCTCAGCCTGGAT +
Preference number: 4 (lower is better)
Translates to: SLSAFCSKPFNKSLGCSKFFISI*DHLSLD
Trigger: ATCCAGGCTGAGGTGGTCTCAGATGGAGATGAAGAA...TTTGGAACATCCTAGAGACTTGTTGAATGGCTTTGAACAAAATGCGGATAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616513.1
CDS-3UTR TCA 90 bp TGCAGTAGAAGGAAAGTGCCTTTATTTTTCAGCGCTAGCAGTGGGGAGATGGTTCGTGACTTGTTCCAATaGCTTATCTTGAGTTATTGC +
Preference number: 4 (lower is better)
Translates to: CSRRKVPLFFSASSGEMVRDLFQ*LILSYC
Trigger: GCAATAACTCAAGATAAGTCATTGGAACAAGTCACG...AACCATCTCCCCACTGCTAGCGCTGAAAAATAAAGGCACTTTCCTTCTACTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649708.2
CDS-3UTR GCA 90 bp TCATCTCTAACAAAAAGTTACAATGGTGTGTCAGAACATCCTGTGACTGACCCTACATCAGGAACACACTaGATTAGAGCTTCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: SSLTKSYNGVSEHPVTDPTSGTH*IRASQP
Trigger: TGGCTGGGAAGCTCTAATGCAGTGTGTTCCTGATGT...AGGGTCAGTCACAGGATGTTCTGACACACCATTGTAACTTTTTGTTAGAGATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR GCA 90 bp TCTGATTTGGAGTCTCTTTTCTGCAGACATGGAAAGAATGTGAGCGATAGTTTCGATAATTGTGCCAGCTaGCATACACTCCACAACTCC +
Preference number: 4 (lower is better)
Translates to: SDLESLFCRHGKNVSDSFDNCAS*HTLHNS
Trigger: GGAGTTGTGGAGTGTATGGCAGCTGGCACAATTATC...GAAACTATCGCTCACATTCTTTCCATGTCTGCAGAAAAGAGACTCCAAATCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000523764.1
ENST00000650049.2
ENST00000679359.1
ENST00000681047.1
CDS-3UTR GCA 90 bp AAATCTCCACTGCTGTGGGTTCAAAACAGCAGGCTTGGACCACTCAAAAATGACTTGGAGTCTCTTTTCTaGAGACATGGAAAGAATGTG +
Preference number: 4 (lower is better)
Translates to: KSPLLWVQNSRLGPLKNDLESLF*RHGKNV
Trigger: CACATTCTTTCCATGTCTGCAGAAAAGAGACTCCAA...GTCATTTTTGAGTGGTCCAAGCCTGCTGTTTTGAACCCACAGCAGTGGAGATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR GCA 90 bp AGGTGTGAGACACCGCACCCAGCCCTTAACTGTCGTAATTTTCAAAGTAGTTTCTTGGAGTCTCTTTTCTaGAGACATGGAAAGAATGTG +
Preference number: 4 (lower is better)
Translates to: RCETPHPALNCRNFQSSFLESLF*RHGKNV
Trigger: CACATTCTTTCCATGTCTGCAGAAAAGAGACTCCAA...GAAACTACTTTGAAAATTACGACAGTTAAGGGCTGGGTGCGGTGTCTCACACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR GCA 90 bp ACTCTCAGCCAGAAAGCCAGTTATATCTCCTTCGTGAGGAACCACAATGTCAAGTTGGAGTCTCTTTTCTaGAGACATGGAAAGAATGTG +
Preference number: 4 (lower is better)
Translates to: TLSQKASYISFVRNHNVKLESLF*RHGKNV
Trigger: CACATTCTTTCCATGTCTGCAGAAAAGAGACTCCAA...CTTGACATTGTGGTTCCTCACGAAGGAGATATAACTGGCTTTCTGGCTGAGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000650049.2
ENST00000679359.1
ENST00000681047.1
ENST00000681145.1
CDS-3UTR GCA 90 bp ATAATTGTGCCAGCTGCCATACACTCCACAACTCCAATCCCAAAATGCTCGTTCGAATCTGCTTACAGATaGACGAGCACTTTTTCTGAT +
Preference number: 4 (lower is better)
Translates to: IIVPAAIHSTTPIPKCSFESAYR*TSTFSD
Trigger: ATCAGAAAAAGTGCTCGTGCATCTGTAAGCAGATTC...GAACGAGCATTTTGGGATTGGAGTTGTGGAGTGTATGGCAGCTGGCACAATTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000650049.2
ENST00000679359.1
ENST00000681047.1
CDS-3UTR GCA 90 bp AGGTGTGAGACACCGCACCCAGCCCTTAACTGTCGTAATTTTCAAAGTAGTTTCGAATCTGCTTACAGATaGACGAGCACTTTTTCTGAT +
Preference number: 4 (lower is better)
Translates to: RCETPHPALNCRNFQSSFESAYR*TSTFSD
Trigger: ATCAGAAAAAGTGCTCGTGCATCTGTAAGCAGATTC...GAAACTACTTTGAAAATTACGACAGTTAAGGGCTGGGTGCGGTGTCTCACACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR GCA 90 bp AGTCTTCTTCACTCTCAGCCAGAAAGCCAGTTATATCTCCTTCGTGAGGAACCATTCCATTTCTTCCAGTaGCACAGTTGGATTAACCTT +
Preference number: 4 (lower is better)
Translates to: SLLHSQPESQLYLLREEPFHFFQ*HSWINL
Trigger: AAGGTTAATCCAACTGTGGCACTGGAAGAAATGGAA...TGGTTCCTCACGAAGGAGATATAACTGGCTTTCTGGCTGAGAGTGAAGAAGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000523764.1
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
CDS-3UTR GCA 90 bp AAATCTCCACTGCTGTGGGTTCAAAACAGCAGGCTTGGACCACTCAAAAATGACTTCCATTTCTTCCAGTaGCACAGTTGGATTAACCTT +
Preference number: 4 (lower is better)
Translates to: KSPLLWVQNSRLGPLKNDFHFFQ*HSWINL
Trigger: AAGGTTAATCCAACTGTGGCACTGGAAGAAATGGAA...GTCATTTTTGAGTGGTCCAAGCCTGCTGTTTTGAACCCACAGCAGTGGAGATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR GCA 90 bp ATAGTCTTCTTCACTCTCAGCCAGAAAGCCAGTTATATCTCCTTCGTGAGGAACGTAGCCCACATCCTCTaGTTTTATGGGCTTAATGAT +
Preference number: 4 (lower is better)
Translates to: IVFFTLSQKASYISFVRNVAHIL*FYGLND
Trigger: ATCATTAAGCCCATAAAAGCAGAGGATGTGGGCTAC...GTTCCTCACGAAGGAGATATAACTGGCTTTCTGGCTGAGAGTGAAGAAGACTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
CDS-3UTR GCA 90 bp AGAGCTTCCCAGCCAAGAAAAATGGATCCTAGACTTTGGCCCAGCAGTGTGAAGTTCAAAATGCCACCTTaGCATCTTACAATGCATTAT +
Preference number: 4 (lower is better)
Translates to: RASQPRKMDPRLWPSSVKFKMPP*HLTMHY
Trigger: ATAATGCATTGTAAGATGGCAAGGTGGCATTTTGAA...CTTCACACTGCTGGGCCAAAGTCTAGGATCCATTTTTCTTGGCTGGGAAGCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000679359.1
ENST00000681047.1
CDS-3UTR GCA 90 bp GTATACCAAGAATGGAAGCCGAAGGCTAGTCATCCATTTTCTTTTCAACACTTCTTCAAGCAATTCTCCTaGCTCAGTCTCCCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: VYQEWKPKASHPFSFQHFFKQFS*LSLPSS
Trigger: GCTACTTGGGAGACTGAGGCAGGAGAATTGCTTGAA...GAAGTGTTGAAAAGAAAATGGATGACTAGCCTTCGGCTTCCATTCTTGGTATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR GCA 90 bp TCATCTCTAACAAAAAGTTACAATGGTGTGTCAGAACATCCTGTGACTGACCCTTTCAAGCAATTCTCCTaGCTCAGTCTCCCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: SSLTKSYNGVSEHPVTDPFKQFS*LSLPSS
Trigger: GCTACTTGGGAGACTGAGGCAGGAGAATTGCTTGAA...AGGGTCAGTCACAGGATGTTCTGACACACCATTGTAACTTTTTGTTAGAGATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR GCA 90 bp ATAGGAATGTCACTTCAAATTCCTGATCAGAGAATCTGCTTACAGATGCACGAGTTCAAGCAATTCTCCTaGCTCAGTCTCCCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: IGMSLQIPDQRICLQMHEFKQFS*LSLPSS
Trigger: GCTACTTGGGAGACTGAGGCAGGAGAATTGCTTGAA...CTCGTGCATCTGTAAGCAGATTCTCTGATCAGGAATTTGAAGTGACATTCCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
CDS-3UTR GCA 90 bp AGTCTTCTTCACTCTCAGCCAGAAAGCCAGTTATATCTCCTTCGTGAGGAACCAAATACAAATCTCCACTaGTGTGGGTTCAAAACAGCA +
Preference number: 4 (lower is better)
Translates to: SLLHSQPESQLYLLREEPNTNLH*CGFKTA
Trigger: TGCTGTTTTGAACCCACAGCAGTGGAGATTTGTATT...TGGTTCCTCACGAAGGAGATATAACTGGCTTTCTGGCTGAGAGTGAAGAAGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
CDS-3UTR GCA 90 bp AAATCTCCACTGCTGTGGGTTCAAAACAGCAGGCTTGGACCACTCAAAAATGACAATACAAATCTCCACTaGTGTGGGTTCAAAACAGCA +
Preference number: 4 (lower is better)
Translates to: KSPLLWVQNSRLGPLKNDNTNLH*CGFKTA
Trigger: TGCTGTTTTGAACCCACAGCAGTGGAGATTTGTATT...GTCATTTTTGAGTGGTCCAAGCCTGCTGTTTTGAACCCACAGCAGTGGAGATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR CCA 90 bp AGGTGTGAGACACCGCACCCAGCCCTTAACTGTCGTAATTTTCAAAGTAGTTTCCTGCACATCACAAGGTaGATAAACAATGTTAGTGCA +
Preference number: 4 (lower is better)
Translates to: RCETPHPALNCRNFQSSFLHITR*INNVSA
Trigger: TGCACTAACATTGTTTATCCACCTTGTGATGTGCAG...GAAACTACTTTGAAAATTACGACAGTTAAGGGCTGGGTGCGGTGTCTCACACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR CCA 90 bp ACTCTCAGCCAGAAAGCCAGTTATATCTCCTTCGTGAGGAACCACAATGTCAAGCTGCACATCACAAGGTaGATAAACAATGTTAGTGCA +
Preference number: 4 (lower is better)
Translates to: TLSQKASYISFVRNHNVKLHITR*INNVSA
Trigger: TGCACTAACATTGTTTATCCACCTTGTGATGTGCAG...CTTGACATTGTGGTTCCTCACGAAGGAGATATAACTGGCTTTCTGGCTGAGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679359.1
ENST00000681047.1
CDS-3UTR CCA 90 bp AGAGAATCTGCTTACAGATGCACGAGCACTTTTTCTGATTTGGAGTCTCTTTTCGGCTCTGATCTGCAATaGATGATTCTTTTCCGGCCT +
Preference number: 4 (lower is better)
Translates to: RESAYRCTSTFSDLESLFGSDLQ*MILFRP
Trigger: AGGCCGGAAAAGAATCATCCATTGCAGATCAGAGCC...GAAAAGAGACTCCAAATCAGAAAAAGTGCTCGTGCATCTGTAAGCAGATTCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000650049.2
ENST00000679359.1
ENST00000681047.1
CDS-3UTR CCA 90 bp AGCGAAGGAGGTGACTCAACCATCTTCTTATTCAGCAATTTAGCAAAGGCTCTGGACAGCCTTCTCAGTTaGTTTACCCTAAGTTCATCA +
Preference number: 4 (lower is better)
Translates to: SEGGDSTIFLFSNLAKALDSLLS*FTLSSS
Trigger: TGATGAACTTAGGGTAAACCAACTGAGAAGGCTGTC...CAGAGCCTTTGCTAAATTGCTGAATAAGAAGATGGTTGAGTCACCTCCTTCGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000650049.2
ENST00000679359.1
ENST00000681047.1
CDS-3UTR CCA 90 bp ATAGTCTTCTTCACTCTCAGCCAGAAAGCCAGTTATATCTCCTTCGTGAGGAACCATGTATACCAAGAATaGAAGCCGAAGGCTAGTCAT +
Preference number: 4 (lower is better)
Translates to: IVFFTLSQKASYISFVRNHVYQE*KPKASH
Trigger: ATGACTAGCCTTCGGCTTCCATTCTTGGTATACATG...GTTCCTCACGAAGGAGATATAACTGGCTTTCTGGCTGAGAGTGAAGAAGACTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000523764.1
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681145.1
CDS-3UTR CCA 90 bp GAAGGTGCATTAAATTTATACCAATTCCTAGCTACTGGCCTAGTAACTAACAATTTGCTGGCAGCACCTTaGCCTCTACCACCCTACACA +
Preference number: 4 (lower is better)
Translates to: EGALNLYQFLATGLVTNNLLAAP*PLPPYT
Trigger: TGTGTAGGGTGGTAGAGGCCAAGGTGCTGCCAGCAA...ATTGTTAGTTACTAGGCCAGTAGCTAGGAATTGGTATAAATTTAATGCACCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR CCA 90 bp ATGCTAGGGCTTAAGAAGAGGATGTTTGGTATGGAGGGTATGTGGGGCGAGATGATTTTCAGGAAACATTaGACAAATCTAGCCATCATC +
Preference number: 4 (lower is better)
Translates to: MLGLKKRMFGMEGMWGEMIFRKH*TNLAII
Trigger: GATGATGGCTAGATTTGTCCAATGTTTCCTGAAAAT...CATCTCGCCCCACATACCCTCCATACCAAACATCCTCTTCTTAAGCCCTAGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649708.2
3UTR CAA 72 bp GGTGCTGATAGTAGGATAATGAACATAGCTTCCAACTaGGCAACCCCCTATATACTTAAACAGAGGAAGCGT +
Preference number: 4 (lower is better)
Translates to: GADSRIMNIASN*ATPYILKQRKR
Trigger: ACGCTTCCTCTGTTTAAGTATATAGGGGGTTGCCAAGTTGGAAGCTATGTTCATTATCCTACTATCAGCACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000679359.1
ENST00000681047.1
CDS-3UTR TCA 90 bp GACAGCATAAACAAAAACAATTTTCACCAGTACCTAGTATGGAAAGGATTGCTGCCCAGCAGTGTGAAGTaGGGATACAGTGAATCTTCC +
Preference number: 4 (lower is better)
Translates to: DSINKNNFHQYLVWKGLLPSSVK*GYSESS
Trigger: GGAAGATTCACTGTATCCTCACTTCACACTGCTGGG...CAGCAATCCTTTCCATACTAGGTACTGGTGAAAATTGTTTTTGTTTATGCTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR TCA 90 bp GAGGAATTAATAGTCATCCTGAAAGTTCTGCAGACAGACGCTAGCGGACAAACCAAAAGCGTATCCCATTaGATCAATGTAAACATCAGG +
Preference number: 4 (lower is better)
Translates to: EELIVILKVLQTDASGQTKSVSH*INVNIR
Trigger: CCTGATGTTTACATTGATTCAATGGGATACGCTTTT...GGTTTGTCCGCTAGCGTCTGTCTGCAGAACTTTCAGGATGACTATTAATTCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR TCA 90 bp GTATACCAAGAATGGAAGCCGAAGGCTAGTCATCCATTTTCTTTTCAACACTTCCTGATCTGCAATGGATaGTTCTTTTCCGGCCTAAAC +
Preference number: 4 (lower is better)
Translates to: VYQEWKPKASHPFSFQHFLICNG*FFSGLN
Trigger: GTTTAGGCCGGAAAAGAATCATCCATTGCAGATCAG...GAAGTGTTGAAAAGAAAATGGATGACTAGCCTTCGGCTTCCATTCTTGGTATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR TCA 90 bp AGAGAATCTGCTTACAGATGCACGAGCACTTTTTCTGATTTGGAGTCTCTTTTCCTGATCTGCAATGGATaGTTCTTTTCCGGCCTAAAC +
Preference number: 4 (lower is better)
Translates to: RESAYRCTSTFSDLESLFLICNG*FFSGLN
Trigger: GTTTAGGCCGGAAAAGAATCATCCATTGCAGATCAG...GAAAAGAGACTCCAAATCAGAAAAAGTGCTCGTGCATCTGTAAGCAGATTCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000650049.2
ENST00000679359.1
ENST00000681047.1
CDS-3UTR TCA 90 bp TCTGATTTGGAGTCTCTTTTCTGCAGACATGGAAAGAATGTGAGCGATAGTTTCGTTATATCTCCTTCGTaGGGAACCACAATGTCAAGC +
Preference number: 4 (lower is better)
Translates to: SDLESLFCRHGKNVSDSFVISPS*GTTMSS
Trigger: GCTTGACATTGTGGTTCCTCACGAAGGAGATATAAC...GAAACTATCGCTCACATTCTTTCCATGTCTGCAGAAAAGAGACTCCAAATCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000523764.1
ENST00000650049.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681145.1
CDS-3UTR TCA 90 bp TCACTTCAAATTCCTGATCAGAGAATCTGCTTACAGATGCACGAGCACTTTTTCGTTATATCTCCTTCGTaGGGAACCACAATGTCAAGC +
Preference number: 4 (lower is better)
Translates to: SLQIPDQRICLQMHEHFFVISPS*GTTMSS
Trigger: GCTTGACATTGTGGTTCCTCACGAAGGAGATATAAC...GAAAAAGTGCTCGTGCATCTGTAAGCAGATTCTCTGATCAGGAATTTGAAGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000523764.1
ENST00000650049.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681145.1
CDS-3UTR TCA 90 bp ATAGGAATGTCACTTCAAATTCCTGATCAGAGAATCTGCTTACAGATGCACGAGGTTATATCTCCTTCGTaGGGAACCACAATGTCAAGC +
Preference number: 4 (lower is better)
Translates to: IGMSLQIPDQRICLQMHEVISPS*GTTMSS
Trigger: GCTTGACATTGTGGTTCCTCACGAAGGAGATATAAC...CTCGTGCATCTGTAAGCAGATTCTCTGATCAGGAATTTGAAGTGACATTCCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000523764.1
ENST00000650049.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681145.1
CDS-3UTR TCA 90 bp GAATGTCACTTCAAATTCCTGATCAGAGAATCTGCTTACAGATGCACGAGCACTTTCCCCAAAGGACAATaGCCAAACACACACATAAAG +
Preference number: 4 (lower is better)
Translates to: ECHFKFLIRESAYRCTSTFPKGQ*PNTHIK
Trigger: CTTTATGTGTGTGTTTGGTCATTGTCCTTTGGGGAA...AGTGCTCGTGCATCTGTAAGCAGATTCTCTGATCAGGAATTTGAAGTGACATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000650049.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681145.1
CDS-3UTR TCA 90 bp ATGATAGGAATGTCACTTCAAATTCCTGATCAGAGAATCTGCTTACAGATGCACGTCAGTCCCACCTCTTaGCTGTATGCTTTGAGAACA +
Preference number: 4 (lower is better)
Translates to: MIGMSLQIPDQRICLQMHVSPTS*LYALRT
Trigger: TGTTCTCAAAGCATACAGTCAAGAGGTGGGACTGAC...GTGCATCTGTAAGCAGATTCTCTGATCAGGAATTTGAAGTGACATTCCTATCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
CDS-3UTR TCA 90 bp TCCCACCTCTTGACTGTATGCTTTGAGAACACGATTAAACAAGTCTGTTTAAAATGTCAGAACATCCTGTaGCTGACCCTCTGTTTGCTG +
Preference number: 4 (lower is better)
Translates to: SHLLTVCFENTIKQVCLKCQNIL*LTLCLL
Trigger: CAGCAAACAGAGGGTCAGTCACAGGATGTTCTGACA...TTTTAAACAGACTTGTTTAATCGTGTTCTCAAAGCATACAGTCAAGAGGTGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR TCA 90 bp GAAAACTTTTTCTTCCTTCACTACATCCTCAGGAATAAGGCAATTGAGTGGATATGTCAGAACATCCTGTaGCTGACCCTCTGTTTGCTG +
Preference number: 4 (lower is better)
Translates to: ENFFFLHYILRNKAIEWICQNIL*LTLCLL
Trigger: CAGCAAACAGAGGGTCAGTCACAGGATGTTCTGACA...TATCCACTCAATTGCCTTATTCCTGAGGATGTAGTGAAGGAAGAAAAAGTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR TCA 90 bp ACTGCTTGCCCAGCGCTCTTTCAAAATGCCACCTTGCCATCTTACAATGCATTAATCTTGATTCTTTCATaGAACAGCTTTGTGACACTG +
Preference number: 4 (lower is better)
Translates to: TACPALFQNATLPSYNALILILS*NSFVTL
Trigger: CAGTGTCACAAAGCTGTTTCATGAAAGAATCAAGAT...TAATGCATTGTAAGATGGCAAGGTGGCATTTTGAAAGAGCGCTGGGCAAGCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR TCA 90 bp CACTCTCAGCCAGAAAGCCAGTTATATCTCCTTCGTGAGGAACCACAATGTCAAATCTTGATTCTTTCATaGAACAGCTTTGTGACACTG +
Preference number: 4 (lower is better)
Translates to: HSQPESQLYLLREEPQCQILILS*NSFVTL
Trigger: CAGTGTCACAAAGCTGTTTCATGAAAGAATCAAGAT...TTGACATTGTGGTTCCTCACGAAGGAGATATAACTGGCTTTCTGGCTGAGAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679359.1
ENST00000681047.1
CDS-3UTR TCA 90 bp GAGGAATTAATAGTCATCCTGAAAGTTCTGCAGACAGACGCTAGCGGACAAACCTGGACCACTCAAAAATaGCATCTGAGAGGAATTAAT +
Preference number: 4 (lower is better)
Translates to: EELIVILKVLQTDASGQTWTTQK*HLRGIN
Trigger: ATTAATTCCTCTCAGATGTCATTTTTGAGTGGTCCA...GGTTTGTCCGCTAGCGTCTGTCTGCAGAACTTTCAGGATGACTATTAATTCCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR GCA 90 bp GTATACCAAGAATGGAAGCCGAAGGCTAGTCATCCATTTTCTTTTCAACACTTCACTCCAATCCCAAAATaGTCGTTCCACATGGTATGC +
Preference number: 4 (lower is better)
Translates to: VYQEWKPKASHPFSFQHFTPIPK*SFHMVC
Trigger: GCATACCATGTGGAACGAGCATTTTGGGATTGGAGT...GAAGTGTTGAAAAGAAAATGGATGACTAGCCTTCGGCTTCCATTCTTGGTATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR GCA 90 bp GGAATGTCACTTCAAATTCCTGATCAGAGAATCTGCTTACAGATGCACGAGCACGAATCTGCTTACAGATaGACGAGCACTTTTTCTGAT +
Preference number: 4 (lower is better)
Translates to: GMSLQIPDQRICLQMHEHESAYR*TSTFSD
Trigger: ATCAGAAAAAGTGCTCGTGCATCTGTAAGCAGATTC...GTGCTCGTGCATCTGTAAGCAGATTCTCTGATCAGGAATTTGAAGTGACATTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000523764.1
ENST00000650049.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681145.1
CDS-3UTR GCA 90 bp AAATTCCTGATCAGAGAATCTGCTTACAGATGCACGAGCACTTTTTCTGATTTGCCTGATCAGAGAATCTaGTTACAGATGCACGAGCAC +
Preference number: 4 (lower is better)
Translates to: KFLIRESAYRCTSTFSDLPDQRI*LQMHEH
Trigger: GTGCTCGTGCATCTGTAAGCAGATTCTCTGATCAGG...CAAATCAGAAAAAGTGCTCGTGCATCTGTAAGCAGATTCTCTGATCAGGAATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000523764.1
ENST00000650049.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681145.1
CDS-3UTR GCA 90 bp CTCCACTGCTGTGGGTTCAAAACAGCAGGCTTGGACCACTCAAAAATGACATCTCTTGCCATCTTACAATaGATTATGCTGGTAATAGAT +
Preference number: 4 (lower is better)
Translates to: LHCCGFKTAGLDHSKMTSLAILQ*IMLVID
Trigger: ATCTATTACCAGCATAATGCATTGTAAGATGGCAAG...AGATGTCATTTTTGAGTGGTCCAAGCCTGCTGTTTTGAACCCACAGCAGTGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR GCA 90 bp TGTTGCCCAGTTCCAAAGTCGCTTCCACATTTTTGGGTATCTCTTCAGCAGCACACTTTTGAAAATTTCTaGAGCCAGCTTGAATTTCTC +
Preference number: 4 (lower is better)
Translates to: CCPVPKSLPHFWVSLQQHTFENF*SQLEFL
Trigger: GAGAAATTCAAGCTGGCTGCAGAAATTTTCAAAAGT...GTGCTGCTGAAGAGATACCCAAAAATGTGGAAGCGACTTTGGAACTGGGCAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000616513.1
CDS-3UTR GCA 90 bp GCGTTTCTATACATCTTCTGCAATCTAGGTAGAGGTTCCCAAATTTCCATTCTTCAAACCATATCATTCTaGCCTGGCCCCTCCAAATCT +
Preference number: 4 (lower is better)
Translates to: AFLYIFCNLGRGSQISILQTISF*PGPSKS
Trigger: AGATTTGGAGGGGCCAGGGCAGAATGATATGGTTTG...AAGAATGGAAATTTGGGAACCTCTACCTAGATTGCAGAAGATGTATAGAAACGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616513.1
CDS-3UTR GCA 90 bp TCACTTCAAATTCCTGATCAGAGAATCTGCTTACAGATGCACGAGCACTTTTTCGATAATTGTGCCAGCTaGCATACACTCCACAACTAC +
Preference number: 4 (lower is better)
Translates to: SLQIPDQRICLQMHEHFFDNCAS*HTLHNY
Trigger: GTAGTTGTGGAGTGTATGGCAGCTGGCACAATTATC...GAAAAAGTGCTCGTGCATCTGTAAGCAGATTCTCTGATCAGGAATTTGAAGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681145.1
CDS-3UTR CCA 90 bp GAATGTCACTTCAAATTCCTGATCAGAGAATCTGCTTACAGATGCACGAGCACTCATGTATACCAAGAATaGAAGCCGAAGGCTAGTCAT +
Preference number: 4 (lower is better)
Translates to: ECHFKFLIRESAYRCTSTHVYQE*KPKASH
Trigger: ATGACTAGCCTTCGGCTTCCATTCTTGGTATACATG...AGTGCTCGTGCATCTGTAAGCAGATTCTCTGATCAGGAATTTGAAGTGACATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000523764.1
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681145.1
CDS-3UTR CCA 90 bp TCATCTCTAACAAAAAGTTACAATGGTGTGTCAGAACATCCTGTGACTGACCCTGAATCAGCCTGTGGATaGGGTCAATTCACTGAACTA +
Preference number: 4 (lower is better)
Translates to: SSLTKSYNGVSEHPVTDPESACG*GQFTEL
Trigger: TAGTTCAGTGAATTGACCCCATCCACAGGCTGATTC...AGGGTCAGTCACAGGATGTTCTGACACACCATTGTAACTTTTTGTTAGAGATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR CCA 90 bp TCATCTCTAACAAAAAGTTACAATGGTGTGTCAGAACATCCTGTGACTGACCCTAAATCTCCACTGCTGTaGGTTCAAAACAGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: SSLTKSYNGVSEHPVTDPKSPLL*VQNSRL
Trigger: AAGCCTGCTGTTTTGAACCCACAGCAGTGGAGATTT...AGGGTCAGTCACAGGATGTTCTGACACACCATTGTAACTTTTTGTTAGAGATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR CCA 90 bp GTATACCAAGAATGGAAGCCGAAGGCTAGTCATCCATTTTCTTTTCAACACTTCAAATCTCCACTGCTGTaGGTTCAAAACAGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: VYQEWKPKASHPFSFQHFKSPLL*VQNSRL
Trigger: AAGCCTGCTGTTTTGAACCCACAGCAGTGGAGATTT...GAAGTGTTGAAAAGAAAATGGATGACTAGCCTTCGGCTTCCATTCTTGGTATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR CCA 90 bp TCAGGATTAACATTAGGCTCCTTGCTACTTTTGAAAATTTCTGCAGCCAGCTTGAAACTGAGATTTGGGTaGGGACATGGCCAAACCATA +
Preference number: 4 (lower is better)
Translates to: SGLTLGSLLLLKISAASLKLRFG*GHGQTI
Trigger: TATGGTTTGGCCATGTCCCCACCCAAATCTCAGTTT...CAAGCTGGCTGCAGAAATTTTCAAAAGTAGCAAGGAGCCTAATGTTAATCCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616513.1
3UTR CAA 72 bp AGCCTTCTCAGTTGGTTTACCCTAAGTTCATCATCTTaGTTACGACAACCTCCAATGAGGACAAGTTTAAGC +
Preference number: 4 (lower is better)
Translates to: SLLSWFTLSSSS*LRQPPMRTSLS
Trigger: GCTTAAACTTGTCCTCATTGGAGGTTGTCGTAACAAAGATGATGAACTTAGGGTAAACCAACTGAGAAGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000650049.2
ENST00000679359.1
ENST00000681047.1
CDS-3UTR TCA 90 bp GAATGTCACTTCAAATTCCTGATCAGAGAATCTGCTTACAGATGCACGAGCACTTTTAAGCGAAGGAGGTaGCTCAACCATCTTCTTATT +
Preference number: 4 (lower is better)
Translates to: ECHFKFLIRESAYRCTSTFKRRR*LNHLLI
Trigger: AATAAGAAGATGGTTGAGTCACCTCCTTCGCTTAAA...AGTGCTCGTGCATCTGTAAGCAGATTCTCTGATCAGGAATTTGAAGTGACATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000650049.2
ENST00000679359.1
ENST00000681047.1
CDS-3UTR TCA 90 bp AGAGAATCTGCTTACAGATGCACGAGCACTTTTTCTGATTTGGAGTCTCTTTTCAAGTTCCACATACAATaGGCCCAGGGAAGAATAATG +
Preference number: 4 (lower is better)
Translates to: RESAYRCTSTFSDLESLFKFHIQ*AQGRIM
Trigger: CATTATTCTTCCCTGGGCTCATTGTATGTGGAACTT...GAAAAGAGACTCCAAATCAGAAAAAGTGCTCGTGCATCTGTAAGCAGATTCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000650049.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681145.1
CDS-3UTR TCA 90 bp TCCCACCTCTTGACTGTATGCTTTGAGAACACGATTAAACAAGTCTGTTTAAAAGGCCACATTGATGAATaGCTGAGAGGAGACTGCAAA +
Preference number: 4 (lower is better)
Translates to: SHLLTVCFENTIKQVCLKGHIDE*LRGDCK
Trigger: TTTGCAGTCTCCTCTCAGTCATTCATCAATGTGGCC...TTTTAAACAGACTTGTTTAATCGTGTTCTCAAAGCATACAGTCAAGAGGTGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR TCA 90 bp TCAGGATTAACATTAGGCTCCTTGCTACTTTTGAAAATTTCTGCAGCCAGCTTGAGTCCCTTCTGCCTATaGGCCTGTAAAATCAAAAGT +
Preference number: 4 (lower is better)
Translates to: SGLTLGSLLLLKISAASLSPFCL*ACKIKS
Trigger: ACTTTTGATTTTACAGGCTCATAGGCAGAAGGGACT...CAAGCTGGCTGCAGAAATTTTCAAAAGTAGCAAGGAGCCTAATGTTAATCCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000616513.1
CDS-3UTR GCA 90 bp GTATACCAAGAATGGAAGCCGAAGGCTAGTCATCCATTTTCTTTTCAACACTTCTCGTTCCACATGGTATaGAGACCAATTGTTGCTTCA +
Preference number: 4 (lower is better)
Translates to: VYQEWKPKASHPFSFQHFSFHMV*RPIVAS
Trigger: TGAAGCAACAATTGGTCTGCATACCATGTGGAACGA...GAAGTGTTGAAAAGAAAATGGATGACTAGCCTTCGGCTTCCATTCTTGGTATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR GCA 90 bp GAATGTCACTTCAAATTCCTGATCAGAGAATCTGCTTACAGATGCACGAGCACTTTGGAGTCTCTTTTCTaGAGACATGGAAAGAATGTG +
Preference number: 4 (lower is better)
Translates to: ECHFKFLIRESAYRCTSTLESLF*RHGKNV
Trigger: CACATTCTTTCCATGTCTGCAGAAAAGAGACTCCAA...AGTGCTCGTGCATCTGTAAGCAGATTCTCTGATCAGGAATTTGAAGTGACATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000523764.1
ENST00000650049.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681145.1
CDS-3UTR GCA 90 bp GAATGTCACTTCAAATTCCTGATCAGAGAATCTGCTTACAGATGCACGAGCACTGAATCTGCTTACAGATaGACGAGCACTTTTTCTGAT +
Preference number: 4 (lower is better)
Translates to: ECHFKFLIRESAYRCTSTESAYR*TSTFSD
Trigger: ATCAGAAAAAGTGCTCGTGCATCTGTAAGCAGATTC...AGTGCTCGTGCATCTGTAAGCAGATTCTCTGATCAGGAATTTGAAGTGACATTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000523764.1
ENST00000650049.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681145.1
CDS-3UTR GCA 90 bp GACAGCATAAACAAAAACAATTTTCACCAGTACCTAGTATGGAAAGGATTGCTGCCTGATCAGAGAATCTaGTTACAGATGCACGAGCAC +
Preference number: 4 (lower is better)
Translates to: DSINKNNFHQYLVWKGLLPDQRI*LQMHEH
Trigger: GTGCTCGTGCATCTGTAAGCAGATTCTCTGATCAGG...CAGCAATCCTTTCCATACTAGGTACTGGTGAAAATTGTTTTTGTTTATGCTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR GCA 90 bp GTATACCAAGAATGGAAGCCGAAGGCTAGTCATCCATTTTCTTTTCAACACTTCCAAAGCCAGATTCTCTaGAACCTGGTTCACATTCAT +
Preference number: 4 (lower is better)
Translates to: VYQEWKPKASHPFSFQHFQSQIL*NLVHIH
Trigger: ATGAATGTGAACCAGGTTGCAGAGAATCTGGCTTTG...GAAGTGTTGAAAAGAAAATGGATGACTAGCCTTCGGCTTCCATTCTTGGTATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000521508.2
ENST00000523764.1
ENST00000649340.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
ENST00000681145.1
CDS-3UTR GCA 90 bp AAATTCCTGATCAGAGAATCTGCTTACAGATGCACGAGCACTTTTTCTGATTTGGATAATTGTGCCAGCTaGCATACACTCCACAACTCT +
Preference number: 4 (lower is better)
Translates to: KFLIRESAYRCTSTFSDLDNCAS*HTLHNS
Trigger: AGAGTTGTGGAGTGTATGGCAGCTGGCACAATTATC...CAAATCAGAAAAAGTGCTCGTGCATCTGTAAGCAGATTCTCTGATCAGGAATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679544.1
CDS-3UTR CCA 90 bp GAATGTCACTTCAAATTCCTGATCAGAGAATCTGCTTACAGATGCACGAGCACTCTGCACATCACAAGGTaGATAAACAATGTTAGTGCA +
Preference number: 4 (lower is better)
Translates to: ECHFKFLIRESAYRCTSTLHITR*INNVSA
Trigger: TGCACTAACATTGTTTATCCACCTTGTGATGTGCAG...AGTGCTCGTGCATCTGTAAGCAGATTCTCTGATCAGGAATTTGAAGTGACATTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679359.1
ENST00000681047.1
CDS-3UTR CCA 90 bp GACAGCATAAACAAAAACAATTTTCACCAGTACCTAGTATGGAAAGGATTGCTGGGCTCTGATCTGCAATaGATGATTCTTTTCCGGCCT +
Preference number: 4 (lower is better)
Translates to: DSINKNNFHQYLVWKGLLGSDLQ*MILFRP
Trigger: AGGCCGGAAAAGAATCATCCATTGCAGATCAGAGCC...CAGCAATCCTTTCCATACTAGGTACTGGTGAAAATTGTTTTTGTTTATGCTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR CCA 90 bp TCCCACCTCTTGACTGTATGCTTTGAGAACACGATTAAACAAGTCTGTTTAAAAGGCTCTGATCTGCAATaGATGATTCTTTTCCGGCCT +
Preference number: 4 (lower is better)
Translates to: SHLLTVCFENTIKQVCLKGSDLQ*MILFRP
Trigger: AGGCCGGAAAAGAATCATCCATTGCAGATCAGAGCC...TTTTAAACAGACTTGTTTAATCGTGTTCTCAAAGCATACAGTCAAGAGGTGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR CCA 90 bp TCATCTCTAACAAAAAGTTACAATGGTGTGTCAGAACATCCTGTGACTGACCCTGACAGCCTTCTCAGTTaGTTTACCCTAAGTTCATCA +
Preference number: 4 (lower is better)
Translates to: SSLTKSYNGVSEHPVTDPDSLLS*FTLSSS
Trigger: TGATGAACTTAGGGTAAACCAACTGAGAAGGCTGTC...AGGGTCAGTCACAGGATGTTCTGACACACCATTGTAACTTTTTGTTAGAGATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR CCA 90 bp TCACTTCAAATTCCTGATCAGAGAATCTGCTTACAGATGCACGAGCACTTTTTCGACAGCCTTCTCAGTTaGTTTACCCTAAGTTCATCA +
Preference number: 4 (lower is better)
Translates to: SLQIPDQRICLQMHEHFFDSLLS*FTLSSS
Trigger: TGATGAACTTAGGGTAAACCAACTGAGAAGGCTGTC...GAAAAAGTGCTCGTGCATCTGTAAGCAGATTCTCTGATCAGGAATTTGAAGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000650049.2
ENST00000679359.1
ENST00000681047.1
CDS-3UTR CCA 90 bp AGAGAATCTGCTTACAGATGCACGAGCACTTTTTCTGATTTGGAGTCTCTTTTCAATGCTCGTTCCACATaGTATGCAGACCAATTGTTG +
Preference number: 4 (lower is better)
Translates to: RESAYRCTSTFSDLESLFNARST*YADQLL
Trigger: CAACAATTGGTCTGCATACCATGTGGAACGAGCATT...GAAAAGAGACTCCAAATCAGAAAAAGTGCTCGTGCATCTGTAAGCAGATTCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000650049.2
ENST00000679359.1
ENST00000681047.1
CDS-3UTR CCA 90 bp GTATACCAAGAATGGAAGCCGAAGGCTAGTCATCCATTTTCTTTTCAACACTTCGCTTTAATGAGAAACTaGCGTCTTTTCTTGGCACTG +
Preference number: 4 (lower is better)
Translates to: VYQEWKPKASHPFSFQHFALMRN*RLFLAL
Trigger: CAGTGCCAAGAAAAGACGCCAGTTTCTCATTAAAGC...GAAGTGTTGAAAAGAAAATGGATGACTAGCCTTCGGCTTCCATTCTTGGTATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR CCA 90 bp GACAGCATAAACAAAAACAATTTTCACCAGTACCTAGTATGGAAAGGATTGCTGCACCAGTACCTAGTATaGAAAGGATTGCTGGCAGCA +
Preference number: 4 (lower is better)
Translates to: DSINKNNFHQYLVWKGLLHQYLV*KGLLAA
Trigger: TGCTGCCAGCAATCCTTTCCATACTAGGTACTGGTG...CAGCAATCCTTTCCATACTAGGTACTGGTGAAAATTGTTTTTGTTTATGCTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR CCA 90 bp TATCTGTTGACCGTTGACATTAACATCGCCGGTATAAACAACATAAACTGCTTCGAATCAGCCTGTGGATaGGGTCAATTCACTGAACTA +
Preference number: 4 (lower is better)
Translates to: YLLTVDINIAGINNINCFESACG*GQFTEL
Trigger: TAGTTCAGTGAATTGACCCCATCCACAGGCTGATTC...GAAGCAGTTTATGTTGTTTATACCGGCGATGTTAATGTCAACGGTCAACAGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679359.1
ENST00000681047.1
CDS-3UTR CCA 90 bp AAATTCCTGATCAGAGAATCTGCTTACAGATGCACGAGCACTTTTTCTGATTTGAAATCTCCACTGCTGTaGGTTCAAAACAGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: KFLIRESAYRCTSTFSDLKSPLL*VQNSRL
Trigger: AAGCCTGCTGTTTTGAACCCACAGCAGTGGAGATTT...CAAATCAGAAAAAGTGCTCGTGCATCTGTAAGCAGATTCTCTGATCAGGAATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
CDS-3UTR CCA 90 bp GCGTTTCTATACATCTTCTGCAATCTAGGTAGAGGTTCCCAAATTTCCATTCTTTCGCTTCCACATTTTTaGGTATCTCTTCAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: AFLYIFCNLGRGSQISILSLPHF*VSLQQH
Trigger: GTGCTGCTGAAGAGATACCCAAAAATGTGGAAGCGA...AAGAATGGAAATTTGGGAACCTCTACCTAGATTGCAGAAGATGTATAGAAACGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616513.1
CDS-3UTR TCA 90 bp TCCCACCTCTTGACTGTATGCTTTGAGAACACGATTAAACAAGTCTGTTTAAAAGAAGTGAGGATACAGTaGATCTTCCACAAGATAGCG +
Preference number: 4 (lower is better)
Translates to: SHLLTVCFENTIKQVCLKEVRIQ*IFHKIA
Trigger: CGCTATCTTGTGGAAGATTCACTGTATCCTCACTTC...TTTTAAACAGACTTGTTTAATCGTGTTCTCAAAGCATACAGTCAAGAGGTGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR TCA 90 bp TCATCTCTAACAAAAAGTTACAATGGTGTGTCAGAACATCCTGTGACTGACCCTTTTAAGCGAAGGAGGTaGCTCAACCATCTTCTTATT +
Preference number: 4 (lower is better)
Translates to: SSLTKSYNGVSEHPVTDPFKRRR*LNHLLI
Trigger: AATAAGAAGATGGTTGAGTCACCTCCTTCGCTTAAA...AGGGTCAGTCACAGGATGTTCTGACACACCATTGTAACTTTTTGTTAGAGATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR TCA 90 bp GTATACCAAGAATGGAAGCCGAAGGCTAGTCATCCATTTTCTTTTCAACACTTCTTTAAGCGAAGGAGGTaGCTCAACCATCTTCTTATT +
Preference number: 4 (lower is better)
Translates to: VYQEWKPKASHPFSFQHFFKRRR*LNHLLI
Trigger: AATAAGAAGATGGTTGAGTCACCTCCTTCGCTTAAA...GAAGTGTTGAAAAGAAAATGGATGACTAGCCTTCGGCTTCCATTCTTGGTATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR TCA 90 bp GAAAACTTTTTCTTCCTTCACTACATCCTCAGGAATAAGGCAATTGAGTGGATAGTTATATCTCCTTCGTaGGGAACCACAATGTCAAGC +
Preference number: 4 (lower is better)
Translates to: ENFFFLHYILRNKAIEWIVISPS*GTTMSS
Trigger: GCTTGACATTGTGGTTCCTCACGAAGGAGATATAAC...TATCCACTCAATTGCCTTATTCCTGAGGATGTAGTGAAGGAAGAAAAAGTTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR TCA 90 bp AAATTCCTGATCAGAGAATCTGCTTACAGATGCACGAGCACTTTTTCTGATTTGCTGTTTGCTGCTTTTTaGTCTGATGACAGATGGCTT +
Preference number: 4 (lower is better)
Translates to: KFLIRESAYRCTSTFSDLLFAAF*SDDRWL
Trigger: AAGCCATCTGTCATCAGATCAAAAAGCAGCAAACAG...CAAATCAGAAAAAGTGCTCGTGCATCTGTAAGCAGATTCTCTGATCAGGAATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
CDS-3UTR TCA 90 bp AGACATGGAAAGAATGTGAGCGATAGTTTCAGCATAGTCTTCTTCACTCTCAGCATCTTGATTCTTTCATaGAACAGCTTTGTGACACTG +
Preference number: 4 (lower is better)
Translates to: RHGKNVSDSFSIVFFTLSILILS*NSFVTL
Trigger: CAGTGTCACAAAGCTGTTTCATGAAAGAATCAAGAT...GCTGAGAGTGAAGAAGACTATGCTGAAACTATCGCTCACATTCTTTCCATGTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
CDS-3UTR GCA 90 bp GAAAACTTTTTCTTCCTTCACTACATCCTCAGGAATAAGGCAATTGAGTGGATAACTCCAATCCCAAAATaGTCGTTCCACATGGTATGC +
Preference number: 4 (lower is better)
Translates to: ENFFFLHYILRNKAIEWITPIPK*SFHMVC
Trigger: GCATACCATGTGGAACGAGCATTTTGGGATTGGAGT...TATCCACTCAATTGCCTTATTCCTGAGGATGTAGTGAAGGAAGAAAAAGTTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR GCA 90 bp TCCCACCTCTTGACTGTATGCTTTGAGAACACGATTAAACAAGTCTGTTTAAAAACTCCAATCCCAAAATaGTCGTTCCACATGGTATGC +
Preference number: 4 (lower is better)
Translates to: SHLLTVCFENTIKQVCLKTPIPK*SFHMVC
Trigger: GCATACCATGTGGAACGAGCATTTTGGGATTGGAGT...TTTTAAACAGACTTGTTTAATCGTGTTCTCAAAGCATACAGTCAAGAGGTGGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR GCA 90 bp GAAGGTGCATTAAATTTATACCAATTCCTAGCTACTGGCCTAGTAACTAACAATCCTGATCAGAGAATCTaGTTACAGATGCACGAGCAC +
Preference number: 4 (lower is better)
Translates to: EGALNLYQFLATGLVTNNPDQRI*LQMHEH
Trigger: GTGCTCGTGCATCTGTAAGCAGATTCTCTGATCAGG...ATTGTTAGTTACTAGGCCAGTAGCTAGGAATTGGTATAAATTTAATGCACCTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR GCA 90 bp ATGATAGGAATGTCACTTCAAATTCCTGATCAGAGAATCTGCTTACAGATGCACCAAAGCCAGATTCTCTaGAACCTGGTTCACATTCAT +
Preference number: 4 (lower is better)
Translates to: MIGMSLQIPDQRICLQMHQSQIL*NLVHIH
Trigger: ATGAATGTGAACCAGGTTGCAGAGAATCTGGCTTTG...GTGCATCTGTAAGCAGATTCTCTGATCAGGAATTTGAAGTGACATTCCTATCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000523764.1
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681145.1
CDS-3UTR GCA 90 bp ATGATAGGAATGTCACTTCAAATTCCTGATCAGAGAATCTGCTTACAGATGCACGTAGCCCACATCCTCTaGTTTTATGGGCTTAATGAT +
Preference number: 4 (lower is better)
Translates to: MIGMSLQIPDQRICLQMHVAHIL*FYGLND
Trigger: ATCATTAAGCCCATAAAAGCAGAGGATGTGGGCTAC...GTGCATCTGTAAGCAGATTCTCTGATCAGGAATTTGAAGTGACATTCCTATCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
CDS-3UTR GCA 90 bp GACAGCATAAACAAAAACAATTTTCACCAGTACCTAGTATGGAAAGGATTGCTGCCACAACTCTTTTTCTaGAGGGCTCTTAAAGCACAC +
Preference number: 4 (lower is better)
Translates to: DSINKNNFHQYLVWKGLLPQLFF*RALKAH
Trigger: GTGTGCTTTAAGAGCCCTGCAGAAAAAGAGTTGTGG...CAGCAATCCTTTCCATACTAGGTACTGGTGAAAATTGTTTTTGTTTATGCTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000679544.1
CDS-3UTR CCA 90 bp ATGATAGGAATGTCACTTCAAATTCCTGATCAGAGAATCTGCTTACAGATGCACGACAGCCTTCTCAGTTaGTTTACCCTAAGTTCATCA +
Preference number: 4 (lower is better)
Translates to: MIGMSLQIPDQRICLQMHDSLLS*FTLSSS
Trigger: TGATGAACTTAGGGTAAACCAACTGAGAAGGCTGTC...GTGCATCTGTAAGCAGATTCTCTGATCAGGAATTTGAAGTGACATTCCTATCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000650049.2
ENST00000679359.1
ENST00000681047.1
CDS-3UTR CCA 90 bp ATGATAGGAATGTCACTTCAAATTCCTGATCAGAGAATCTGCTTACAGATGCACCATGTATACCAAGAATaGAAGCCGAAGGCTAGTCAT +
Preference number: 4 (lower is better)
Translates to: MIGMSLQIPDQRICLQMHHVYQE*KPKASH
Trigger: ATGACTAGCCTTCGGCTTCCATTCTTGGTATACATG...GTGCATCTGTAAGCAGATTCTCTGATCAGGAATTTGAAGTGACATTCCTATCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000523764.1
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681145.1
CDS-3UTR CCA 90 bp GAAGGTGCATTAAATTTATACCAATTCCTAGCTACTGGCCTAGTAACTAACAATCACCAGTACCTAGTATaGAAAGGATTGCTGGCAGCA +
Preference number: 4 (lower is better)
Translates to: EGALNLYQFLATGLVTNNHQYLV*KGLLAA
Trigger: TGCTGCCAGCAATCCTTTCCATACTAGGTACTGGTG...ATTGTTAGTTACTAGGCCAGTAGCTAGGAATTGGTATAAATTTAATGCACCTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR CCA 90 bp CCCTCCAAATCTCACGTCATCACATTTCAAAACCAATTATGCCTTCCCAACAGTAGACATTTTCCCCCATaGTCTTCAGGATTAACATTA +
Preference number: 4 (lower is better)
Translates to: PSKSHVITFQNQLCLPNSRHFPP*SSGLTL
Trigger: TAATGTTAATCCTGAAGACCATGGGGGAAAATGTCT...ACTGTTGGGAAGGCATAATTGGTTTTGAAATGTGATGACGTGAGATTTGGAGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000616513.1
CDS-3UTR TCA 90 bp GAAGGTGCATTAAATTTATACCAATTCCTAGCTACTGGCCTAGTAACTAACAATGAAGTGAGGATACAGTaGATCTTCCACAAGATAGCG +
Preference number: 4 (lower is better)
Translates to: EGALNLYQFLATGLVTNNEVRIQ*IFHKIA
Trigger: CGCTATCTTGTGGAAGATTCACTGTATCCTCACTTC...ATTGTTAGTTACTAGGCCAGTAGCTAGGAATTGGTATAAATTTAATGCACCTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR TCA 90 bp GAAAACTTTTTCTTCCTTCACTACATCCTCAGGAATAAGGCAATTGAGTGGATAAAGTTCCACATACAATaGGCCCAGGGAAGAATAATG +
Preference number: 4 (lower is better)
Translates to: ENFFFLHYILRNKAIEWIKFHIQ*AQGRIM
Trigger: CATTATTCTTCCCTGGGCTCATTGTATGTGGAACTT...TATCCACTCAATTGCCTTATTCCTGAGGATGTAGTGAAGGAAGAAAAAGTTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
CDS-3UTR TCA 90 bp GACAGCATAAACAAAAACAATTTTCACCAGTACCTAGTATGGAAAGGATTGCTGAAGTTCCACATACAATaGGCCCAGGGAAGAATAATG +
Preference number: 4 (lower is better)
Translates to: DSINKNNFHQYLVWKGLLKFHIQ*AQGRIM
Trigger: CATTATTCTTCCCTGGGCTCATTGTATGTGGAACTT...CAGCAATCCTTTCCATACTAGGTACTGGTGAAAATTGTTTTTGTTTATGCTGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
CDS-3UTR TCA 90 bp AAATTCCTGATCAGAGAATCTGCTTACAGATGCACGAGCACTTTTTCTGATTTGACATTGATGAATGACTaGGAGGAGACTGCAAAGAAA +
Preference number: 4 (lower is better)
Translates to: KFLIRESAYRCTSTFSDLTLMND*EETAKK
Trigger: TTTCTTTGCAGTCTCCTCTCAGTCATTCATCAATGT...CAAATCAGAAAAAGTGCTCGTGCATCTGTAAGCAGATTCTCTGATCAGGAATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
CDS-3UTR TCA 90 bp GACAGCATAAACAAAAACAATTTTCACCAGTACCTAGTATGGAAAGGATTGCTGCTGTTTGCTGCTTTTTaGTCTGATGACAGATGGCTT +
Preference number: 4 (lower is better)
Translates to: DSINKNNFHQYLVWKGLLLFAAF*SDDRWL
Trigger: AAGCCATCTGTCATCAGATCAAAAAGCAGCAAACAG...CAGCAATCCTTTCCATACTAGGTACTGGTGAAAATTGTTTTTGTTTATGCTGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR TCA 90 bp AGAGAATCTGCTTACAGATGCACGAGCACTTTTTCTGATTTGGAGTCTCTTTTCTGGACCACTCAAAAATaGCATCTGAGAGGAATTAAT +
Preference number: 4 (lower is better)
Translates to: RESAYRCTSTFSDLESLFWTTQK*HLRGIN
Trigger: ATTAATTCCTCTCAGATGTCATTTTTGAGTGGTCCA...GAAAAGAGACTCCAAATCAGAAAAAGTGCTCGTGCATCTGTAAGCAGATTCTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
CDS-3UTR GCA 90 bp TTTCCACAGATGATAGGAATGTCACTTCAAATTCCTGATCAGAGAATCTGCTTATCGTTCCACATGGTATaGAGACCAATTGTTGCTTCA +
Preference number: 4 (lower is better)
Translates to: FPQMIGMSLQIPDQRICLSFHMV*RPIVAS
Trigger: TGAAGCAACAATTGGTCTGCATACCATGTGGAACGA...TAAGCAGATTCTCTGATCAGGAATTTGAAGTGACATTCCTATCATCTGTGGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000650049.2
ENST00000679359.1
ENST00000681047.1
CDS-3UTR GCA 90 bp TCCCACCTCTTGACTGTATGCTTTGAGAACACGATTAAACAAGTCTGTTTAAAATCGTTCCACATGGTATaGAGACCAATTGTTGCTTCA +
Preference number: 4 (lower is better)
Translates to: SHLLTVCFENTIKQVCLKSFHMV*RPIVAS
Trigger: TGAAGCAACAATTGGTCTGCATACCATGTGGAACGA...TTTTAAACAGACTTGTTTAATCGTGTTCTCAAAGCATACAGTCAAGAGGTGGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR GCA 90 bp GAAAACTTTTTCTTCCTTCACTACATCCTCAGGAATAAGGCAATTGAGTGGATATCGTTCCACATGGTATaGAGACCAATTGTTGCTTCA +
Preference number: 4 (lower is better)
Translates to: ENFFFLHYILRNKAIEWISFHMV*RPIVAS
Trigger: TGAAGCAACAATTGGTCTGCATACCATGTGGAACGA...TATCCACTCAATTGCCTTATTCCTGAGGATGTAGTGAAGGAAGAAAAAGTTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR GCA 90 bp TTTCCACAGATGATAGGAATGTCACTTCAAATTCCTGATCAGAGAATCTGCTTACAAAGCCAGATTCTCTaGAACCTGGTTCACATTCAT +
Preference number: 4 (lower is better)
Translates to: FPQMIGMSLQIPDQRICLQSQIL*NLVHIH
Trigger: ATGAATGTGAACCAGGTTGCAGAGAATCTGGCTTTG...TAAGCAGATTCTCTGATCAGGAATTTGAAGTGACATTCCTATCATCTGTGGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000523764.1
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681145.1
CDS-3UTR GCA 90 bp ATGATAGGAATGTCACTTCAAATTCCTGATCAGAGAATCTGCTTACAGATGCACAATACAAATCTCCACTaGTGTGGGTTCAAAACAGCA +
Preference number: 4 (lower is better)
Translates to: MIGMSLQIPDQRICLQMHNTNLH*CGFKTA
Trigger: TGCTGTTTTGAACCCACAGCAGTGGAGATTTGTATT...GTGCATCTGTAAGCAGATTCTCTGATCAGGAATTTGAAGTGACATTCCTATCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
CDS-3UTR GCA 90 bp AGTGAAATATCAACAAAACACAAGTTCAGCTGCCCTCCGCTTGCAAAATTGAATTTGAAGTTCTTTTTCTaGAGGGCTCTTAAAGCACAC +
Preference number: 4 (lower is better)
Translates to: SEISTKHKFSCPPLAKLNLKFFF*RALKAH
Trigger: GTGTGCTTTAAGAGCCCTGCAGAAAAAGAACTTCAA...ATTCAATTTTGCAAGCGGAGGGCAGCTGAACTTGTGTTTTGTTGATATTTCACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000649708.2
CDS-3UTR GCA 90 bp TTTCCACAGATGATAGGAATGTCACTTCAAATTCCTGATCAGAGAATCTGCTTACACAACTACTTTTTCTaGAGGGCTCTTAAAGCACAC +
Preference number: 4 (lower is better)
Translates to: FPQMIGMSLQIPDQRICLHNYFF*RALKAH
Trigger: GTGTGCTTTAAGAGCCCTGCAGAAAAAGTAGTTGTG...TAAGCAGATTCTCTGATCAGGAATTTGAAGTGACATTCCTATCATCTGTGGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681145.1
CDS-3UTR TCA 90 bp GAAGGTGCATTAAATTTATACCAATTCCTAGCTACTGGCCTAGTAACTAACAATTTCCCCAAAGGACAATaGCCAAACACACACATAAAG +
Preference number: 4 (lower is better)
Translates to: EGALNLYQFLATGLVTNNFPKGQ*PNTHIK
Trigger: CTTTATGTGTGTGTTTGGTCATTGTCCTTTGGGGAA...ATTGTTAGTTACTAGGCCAGTAGCTAGGAATTGGTATAAATTTAATGCACCTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
CDS-3UTR TCA 90 bp TCCCACCTCTTGACTGTATGCTTTGAGAACACGATTAAACAAGTCTGTTTAAAAACATTGATGAATGACTaGGAGGAGACTGCAAAGAAA +
Preference number: 4 (lower is better)
Translates to: SHLLTVCFENTIKQVCLKTLMND*EETAKK
Trigger: TTTCTTTGCAGTCTCCTCTCAGTCATTCATCAATGT...TTTTAAACAGACTTGTTTAATCGTGTTCTCAAAGCATACAGTCAAGAGGTGGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR TCA 90 bp GAAGGTGCATTAAATTTATACCAATTCCTAGCTACTGGCCTAGTAACTAACAATCTGTTTGCTGCTTTTTaGTCTGATGACAGATGGCTT +
Preference number: 4 (lower is better)
Translates to: EGALNLYQFLATGLVTNNLFAAF*SDDRWL
Trigger: AAGCCATCTGTCATCAGATCAAAAAGCAGCAAACAG...ATTGTTAGTTACTAGGCCAGTAGCTAGGAATTGGTATAAATTTAATGCACCTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR GCA 90 bp TCCCACCTCTTGACTGTATGCTTTGAGAACACGATTAAACAAGTCTGTTTAAAATTGGAGTCTCTTTTCTaGAGACATGGAAAGAATGTG +
Preference number: 4 (lower is better)
Translates to: SHLLTVCFENTIKQVCLKLESLF*RHGKNV
Trigger: CACATTCTTTCCATGTCTGCAGAAAAGAGACTCCAA...TTTTAAACAGACTTGTTTAATCGTGTTCTCAAAGCATACAGTCAAGAGGTGGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR GCA 90 bp TCCCACCTCTTGACTGTATGCTTTGAGAACACGATTAAACAAGTCTGTTTAAAAGAATCTGCTTACAGATaGACGAGCACTTTTTCTGAT +
Preference number: 4 (lower is better)
Translates to: SHLLTVCFENTIKQVCLKESAYR*TSTFSD
Trigger: ATCAGAAAAAGTGCTCGTGCATCTGTAAGCAGATTC...TTTTAAACAGACTTGTTTAATCGTGTTCTCAAAGCATACAGTCAAGAGGTGGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR GCA 90 bp GAAGGTGCATTAAATTTATACCAATTCCTAGCTACTGGCCTAGTAACTAACAATCAAAGCCAGATTCTCTaGAACCTGGTTCACATTCAT +
Preference number: 4 (lower is better)
Translates to: EGALNLYQFLATGLVTNNQSQIL*NLVHIH
Trigger: ATGAATGTGAACCAGGTTGCAGAGAATCTGGCTTTG...ATTGTTAGTTACTAGGCCAGTAGCTAGGAATTGGTATAAATTTAATGCACCTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR GCA 90 bp TATCTGTTGACCGTTGACATTAACATCGCCGGTATAAACAACATAAACTGCTTCCACCTCTTGACTGTATaGTTTGAGAACACGATTAAA +
Preference number: 4 (lower is better)
Translates to: YLLTVDINIAGINNINCFHLLTV*FENTIK
Trigger: TTTAATCGTGTTCTCAAAGCATACAGTCAAGAGGTG...GAAGCAGTTTATGTTGTTTATACCGGCGATGTTAATGTCAACGGTCAACAGATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679359.1
ENST00000681047.1
CDS-3UTR GCA 90 bp ATGATAGGAATGTCACTTCAAATTCCTGATCAGAGAATCTGCTTACAGATGCACCACCTCTTGACTGTATaGTTTGAGAACACGATTAAA +
Preference number: 4 (lower is better)
Translates to: MIGMSLQIPDQRICLQMHHLLTV*FENTIK
Trigger: TTTAATCGTGTTCTCAAAGCATACAGTCAAGAGGTG...GTGCATCTGTAAGCAGATTCTCTGATCAGGAATTTGAAGTGACATTCCTATCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
CDS-3UTR GCA 90 bp ATAGGAATGTCACTTCAAATTCCTGATCAGAGAATCTGCTTACAGATGCACGAGTTCAAAATGCCACCTTaGCATCTTACAATGCATTAT +
Preference number: 4 (lower is better)
Translates to: IGMSLQIPDQRICLQMHEFKMPP*HLTMHY
Trigger: ATAATGCATTGTAAGATGGCAAGGTGGCATTTTGAA...CTCGTGCATCTGTAAGCAGATTCTCTGATCAGGAATTTGAAGTGACATTCCTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
CDS-3UTR GCA 90 bp TCCCACCTCTTGACTGTATGCTTTGAGAACACGATTAAACAAGTCTGTTTAAAAAATACAAATCTCCACTaGTGTGGGTTCAAAACAGCA +
Preference number: 4 (lower is better)
Translates to: SHLLTVCFENTIKQVCLKNTNLH*CGFKTA
Trigger: TGCTGTTTTGAACCCACAGCAGTGGAGATTTGTATT...TTTTAAACAGACTTGTTTAATCGTGTTCTCAAAGCATACAGTCAAGAGGTGGGA
38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR TCA 90 bp TCCCACCTCTTGACTGTATGCTTTGAGAACACGATTAAACAAGTCTGTTTAAAAAAAAGCGTATCCCATTaGATCAATGTAAACATCAGG +
Preference number: 4 (lower is better)
Translates to: SHLLTVCFENTIKQVCLKKSVSH*INVNIR
Trigger: CCTGATGTTTACATTGATTCAATGGGATACGCTTTT...TTTTAAACAGACTTGTTTAATCGTGTTCTCAAAGCATACAGTCAAGAGGTGGGA
37% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR TCA 90 bp GAAGGTGCATTAAATTTATACCAATTCCTAGCTACTGGCCTAGTAACTAACAATGTCACTTCAAATTCCTaGTCAGAGAATCTGCTTACA +
Preference number: 4 (lower is better)
Translates to: EGALNLYQFLATGLVTNNVTSNS*SENLLT
Trigger: TGTAAGCAGATTCTCTGATCAGGAATTTGAAGTGAC...ATTGTTAGTTACTAGGCCAGTAGCTAGGAATTGGTATAAATTTAATGCACCTTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR TCA 90 bp GACAGCATAAACAAAAACAATTTTCACCAGTACCTAGTATGGAAAGGATTGCTGTGGACCACTCAAAAATaGCATCTGAGAGGAATTAAT +
Preference number: 4 (lower is better)
Translates to: DSINKNNFHQYLVWKGLLWTTQK*HLRGIN
Trigger: ATTAATTCCTCTCAGATGTCATTTTTGAGTGGTCCA...CAGCAATCCTTTCCATACTAGGTACTGGTGAAAATTGTTTTTGTTTATGCTGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR GCA 90 bp AAATTCCTGATCAGAGAATCTGCTTACAGATGCACGAGCACTTTTTCTGATTTGCTTGCCATCTTACAATaGATTATGCTGGTAATAGAT +
Preference number: 4 (lower is better)
Translates to: KFLIRESAYRCTSTFSDLLAILQ*IMLVID
Trigger: ATCTATTACCAGCATAATGCATTGTAAGATGGCAAG...CAAATCAGAAAAAGTGCTCGTGCATCTGTAAGCAGATTCTCTGATCAGGAATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
CDS-3UTR TCA 90 bp GAAGGTGCATTAAATTTATACCAATTCCTAGCTACTGGCCTAGTAACTAACAATTGGACCACTCAAAAATaGCATCTGAGAGGAATTAAT +
Preference number: 4 (lower is better)
Translates to: EGALNLYQFLATGLVTNNWTTQK*HLRGIN
Trigger: ATTAATTCCTCTCAGATGTCATTTTTGAGTGGTCCA...ATTGTTAGTTACTAGGCCAGTAGCTAGGAATTGGTATAAATTTAATGCACCTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR GCA 90 bp GAAAACTTTTTCTTCCTTCACTACATCCTCAGGAATAAGGCAATTGAGTGGATACTTGCCATCTTACAATaGATTATGCTGGTAATAGAT +
Preference number: 4 (lower is better)
Translates to: ENFFFLHYILRNKAIEWILAILQ*IMLVID
Trigger: ATCTATTACCAGCATAATGCATTGTAAGATGGCAAG...TATCCACTCAATTGCCTTATTCCTGAGGATGTAGTGAAGGAAGAAAAAGTTTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000679544.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR CCA 90 bp TCCCACCTCTTGACTGTATGCTTTGAGAACACGATTAAACAAGTCTGTTTAAAATGTTTCTTCTTTAATTaGCATATGGAGCTTGGGAAT +
Preference number: 4 (lower is better)
Translates to: SHLLTVCFENTIKQVCLKCFFFN*HMELGN
Trigger: ATTCCCAAGCTCCATATGCCAATTAAAGAAGAAACA...TTTTAAACAGACTTGTTTAATCGTGTTCTCAAAGCATACAGTCAAGAGGTGGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521508.2
CDS-3UTR CAA 90 bp CCCAGTAGGGACTCTGTGTGGGGGCTCCAACCCCACATTTCCCTTCTGCACTGCTCCAGCCTCTGCCTGTaGCCCAGTTCCAAAGTCGCT +
Preference number: 5 (lower is better)
Translates to: PSRDSVWGLQPHISLLHCSSLCL*PSSKVA
Trigger: AGCGACTTTGGAACTGGGCAACAGGCAGAGGCTGGA...GCAGTGCAGAAGGGAAATGTGGGGTTGGAGCCCCCACACAGAGTCCCTACTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616513.1
CDS-3UTR CAA 90 bp GAGCAGCTCTGCCCCTGTAGATTTGCAGGGTACAGCCTCCCTCCTGGCTGCTTTAGCACTAGCTCTGCATaGGCCCCTTTCAGCCACGGC +
Preference number: 5 (lower is better)
Translates to: EQLCPCRFAGYSLPPGCFSTSSA*APFSHG
Trigger: GCCGTGGCTGAAAGGGGCCAATGCAGAGCTAGTGCT...AAAGCAGCCAGGAGGGAGGCTGTACCCTGCAAATCTACAGGGGCAGAGCTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616513.1
CDS TCA 90 bp ACAGGGTCTCGCTCTGTCTGTCGCCCAGGCGGGAGTACAGTGGCGTaGTCTTGGCTTATTGTAGCCTCCACCTCTCGGGTTCAAGTGATT +
Preference number: 5 (lower is better)
Translates to: TGSRSVCRPGGSTVA*SWLIVASTSRVQVI
Trigger: AATCACTTGAACCCGAGAGGTGGAGGCTACAATAAGCCAAGATCACGCCACTGTACTCCCGCCTGGGCGACAGACAGAGCGAGACCCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519151.1
CDS TCA 90 bp GCTACACTGGACGGGCAAGTACCCCTACAGAAGAGAAAACGTCTGTaGGCCCACACGACCGGCTGCTCACCTCAACAACTTGCACAGGCA +
Preference number: 5 (lower is better)
Translates to: ATLDGQVPLQKRKRL*AHTTGCSPQQLAQA
Trigger: TGCCTGTGCAAGTTGTTGAGGTGAGCAGCCGGTCGTGTGGGCTCACAGACGTTTTCTCTTCTGTAGGGGTACTTGCCCGTCCAGTGTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000680950.1
ENST00000681226.1
CDS-3UTR CAA 90 bp GCAGAGGTTCTCCATGAGGGCCCTGCCCCGGTGGCAAACTTTTGCCTGGGCATCTCCAAATGGGAGAAATaGGCCAAAACAAGGGGGTTA +
Preference number: 5 (lower is better)
Translates to: AEVLHEGPAPVANFCLGISKWEK*AKTRGL
Trigger: TAACCCCCTTGTTTTGGCCAATTTCTCCCATTTGGA...GATGCCCAGGCAAAAGTTTGCCACCGGGGCAGGGCCCTCATGGAGAACCTCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000616513.1
CDS CCA 90 bp GGATGCTGGGGAAGCCTAAAGGATGACAATCTAACTGCTCCTCTCTaGCCCCTTCCCAGTCACTCTTTACCCAGCAGCAAGAATGAGCCT +
Preference number: 5 (lower is better)
Translates to: GCWGSLKDDNLTAPL*PLPSHSLPSSKNEP
Trigger: AGGCTCATTCTTGCTGCTGGGTAAAGAGTGACTGGGAAGGGGCCAGAGAGGAGCAGTTAGATTGTCATCCTTTAGGCTTCCCCAGCATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519151.1
CDS CCA 90 bp CTGTGTAGCCATGGAGTCTGGGATCTTGAGGCAGGAACTCTAGGCTaGTGTGCAGTCTCTTGCTCACTACTCCAATGTACTGCCACAGAT +
Preference number: 5 (lower is better)
Translates to: LCSHGVWDLEAGTLG*CAVSCSLLQCTATD
Trigger: ATCTGTGGCAGTACATTGGAGTAGTGAGCAAGAGACTGCACACCAGCCTAGAGTTCCTGCCTCAAGATCCCAGACTCCATGGCTACACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679495.1
CDS TCA 90 bp GCTTCAGATGCCTCCAGCCCCAGCTGCCATCTAATTGCAACAGTATaGTGGAGACCAAACATGGCAGCCCCTAAACCATGTCACAGAACA +
Preference number: 5 (lower is better)
Translates to: ASDASSPSCHLIATV*WRPNMAAPKPCHRT
Trigger: TGTTCTGTGACATGGTTTAGGGGCTGCCATGTTTGGTCTCCATCATACTGTTGCAATTAGATGGCAGCTGGGGCTGGAGGCATCTGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519151.1
CDS TCA 90 bp CGCATTGATAAAGACACCCACAGGATGCTGGGGAAGCCTAAAGGATaGCAATCTAACTGCTCCTCTCTGGCCCCTTCCCAGTCACTCTTT +
Preference number: 5 (lower is better)
Translates to: RIDKDTHRMLGKPKG*QSNCSSLAPSQSLF
Trigger: AAAGAGTGACTGGGAAGGGGCCAGAGAGGAGCAGTTAGATTGTCATCCTTTAGGCTTCCCCAGCATCCTGTGGGTGTCTTTATCAATGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519151.1
CDS-3UTR CAA 90 bp TTCCAGCCTCTGCCTGTTGCCCAGTTCCAAAGTCGCTTCCACATTTTTGGGTATCCCAAATTTCCATTCTaGACTTCTGTGCACCCGCAG +
Preference number: 5 (lower is better)
Translates to: FQPLPVAQFQSRFHIFGYPKFPF*TSVHPQ
Trigger: CTGCGGGTGCACAGAAGTCAAGAATGGAAATTTGGG...ATACCCAAAAATGTGGAAGCGACTTTGGAACTGGGCAACAGGCAGAGGCTGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616513.1
CDS GCA 90 bp AACTCTAGGCTGGTGTGCAGTCTCTTGCTCACTACTCCAATGTACTaGCACAGATTAGGACTTGAGTCCGCCATCTCTCAACAACTTGCA +
Preference number: 5 (lower is better)
Translates to: NSRLVCSLLLTTPMY*HRLGLESAISQQLA
Trigger: TGCAAGTTGTTGAGAGATGGCGGACTCAAGTCCTAATCTGTGGCAGTACATTGGAGTAGTGAGCAAGAGACTGCACACCAGCCTAGAGTT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679495.1
CDS-3UTR CAA 90 bp GGGCTTAAGAAGAGGATGTTTGGTATGGAGGGTATGTGGGGCGAGATGGTGCAATTAAGAAGAGGATGTTaGGTATGGAGGGTATGTGGG +
Preference number: 5 (lower is better)
Translates to: GLKKRMFGMEGMWGEMVQLRRGC*VWRVCG
Trigger: CCCACATACCCTCCATACCAAACATCCTCTTCTTAA...TTGCACCATCTCGCCCCACATACCCTCCATACCAAACATCCTCTTCTTAAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649708.2
CDS CCA 90 bp GCTGCTCCTTGTTCTGCATGTCAGAGTAAAGTACCTGTGAAGGAATaGGGAGGGATGAGAAACGCAATGTGGCCAGAGCAAGATGAAAAA +
Preference number: 5 (lower is better)
Translates to: AAPCSACQSKVPVKE*GGMRNAMWPEQDEK
Trigger: TTTTTCATCTTGCTCTGGCCACATTGCGTTTCTCATCCCTCCCCATTCCTTCACAGGTACTTTACTCTGACATGCAGAACAAGGAGCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519151.1
CDS-3UTR CAA 90 bp GGCTGCCATGAAGGTCTCCGACATTGCCTGGAGACATTTTCCCCCATGGTCTTCTTCTTTTCTACTGCATaGTCAGGCTGCAAATTTTCT +
Preference number: 5 (lower is better)
Translates to: GCHEGLRHCLETFSPMVFFFSTA*SGCKFS
Trigger: AGAAAATTTGCAGCCTGACAATGCAGTAGAAAAGAA...GAAGACCATGGGGGAAAATGTCTCCAGGCAATGTCGGAGACCTTCATGGCAGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000616513.1
CDS-3UTR CAA 90 bp GGTATGGAGGGTATGTGGGGCGAGATGGTGCAAGTCTACGTGACTTGTTCCAATAAATTAGCTGCAGCCTaGAAGTTCTTTTTCTGCAGG +
Preference number: 5 (lower is better)
Translates to: GMEGMWGEMVQVYVTCSNKLAAA*KFFFCR
Trigger: CCTGCAGAAAAAGAACTTCAAGGCTGCAGCTAATTT...ATTGGAACAAGTCACGTAGACTTGCACCATCTCGCCCCACATACCCTCCATACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649708.2
CDS-3UTR CAA 90 bp GGTATGGAGGGTATGTGGGGCGAGATGGTGCAAGTCTACGTGACTTGTTCCAATACTTATCTTGAGTTATaGCCCCATCTGGTGAATTGG +
Preference number: 5 (lower is better)
Translates to: GMEGMWGEMVQVYVTCSNTYLEL*PHLVNW
Trigger: CCAATTCACCAGATGGGGCAATAACTCAAGATAAGT...ATTGGAACAAGTCACGTAGACTTGCACCATCTCGCCCCACATACCCTCCATACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649708.2
CDS CCA 90 bp CGGGGAACAAAAAGAGATTTAATTGGACTTACAGTTCCATATGGCTaGGGAGACCTCAGAATCACGGCAGGAGGTGTAAGGCACTTCTTA +
Preference number: 5 (lower is better)
Translates to: RGTKRDLIGLTVPYG*GDLRITAGGVRHFL
Trigger: TAAGAAGTGCCTTACACCTCCTGCCGTGATTCTGAGGTCTCCCCAGCCATATGGAACTGTAAGTCCAATTAAATCTCTTTTTGTTCCCCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649651.2
CDS-3UTR CAA 90 bp CATTTCAGCATTAACCCATATGTCCACAGTCCAAAGTCTCATCCGAGACAAGGCGTCGCTTCCACATTTTaGGGTATCTCTTCAGCAGCA +
Preference number: 5 (lower is better)
Translates to: HFSINPYVHSPKSHPRQGVASTF*GISSAA
Trigger: TGCTGCTGAAGAGATACCCAAAAATGTGGAAGCGAC...GCCTTGTCTCGGATGAGACTTTGGACTGTGGACATATGGGTTAATGCTGAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616513.1
CDS-3UTR CAA 90 bp AGGATTAACATTAGGCTCCTTGCTACTTTTGAAAATTTCTGCAGCCAGCTTGAATGGGTTCCCATGGTCTaGAGCAGCTCTGCCCCTGTA +
Preference number: 5 (lower is better)
Translates to: RINIRLLATFENFCSQLEWVPMV*SSSAPV
Trigger: TACAGGGGCAGAGCTGCTCAAGACCATGGGAACCCA...TTCAAGCTGGCTGCAGAAATTTTCAAAAGTAGCAAGGAGCCTAATGTTAATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000616513.1
CDS GCA 90 bp CTCTGTGACTATTTTGACCAACAGAATATGGCAAAAGTGACATTGTaGCAGTTTCCCAACATAGACTCTAAGGGACTGGCAGCTCCTACT +
Preference number: 5 (lower is better)
Translates to: LCDYFDQQNMAKVTL*QFPNIDSKGLAAPT
Trigger: AGTAGGAGCTGCCAGTCCCTTAGAGTCTATGTTGGGAAACTGGCACAATGTCACTTTTGCCATATTCTGTTGGTCAAAATAGTCACAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519151.1
CDS-3UTR CAA 90 bp ATAATTGTGCCAGCTGCCATACACTCCACAACTCCAATCCCAAAATGCTCGTTCAACATAGCTTCCAACTaGGCAACCCCCTATATACTT +
Preference number: 5 (lower is better)
Translates to: IIVPAAIHSTTPIPKCSFNIASN*ATPYIL
Trigger: AAGTATATAGGGGGTTGCCAAGTTGGAAGCTATGTT...GAACGAGCATTTTGGGATTGGAGTTGTGGAGTGTATGGCAGCTGGCACAATTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000679359.1
ENST00000681047.1
CDS TCA 90 bp AAGAAAAGAACACTATATAGAAAGGGAAGGACTCGAGAGAGAGCATaGTGTGTTCAGGGAGCTGCTCCTTGTTCTGCATGTCAGAGTAAA +
Preference number: 5 (lower is better)
Translates to: KKRTLYRKGRTRERA*CVQGAAPCSACQSK
Trigger: TTTACTCTGACATGCAGAACAAGGAGCAGCTCCCTGAACACATCATGCTCTCTCTCGAGTCCTTCCCTTTCTATATAGTGTTCTTTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519151.1
CDS GCA 90 bp ACTTCATACACCAGCCTGTGTCAGTTTGAAGCATTATTAGCTATTTaGCCTGCAAACTTGGGAAGGGTTTTTCTGCCTTGCAGTAGTATG +
Preference number: 5 (lower is better)
Translates to: TSYTSLCQFEALLAI*PANLGRVFLPCSSM
Trigger: CATACTACTGCAAGGCAGAAAAACCCTTCCCAAGTTTGCAGGGCAAATAGCTAATAATGCTTCAAACTGACACAGGCTGGTGTATGAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679495.1
CDS TCA 90 bp TTCCACAGCATTTCCAAGTACTTCATACACCAGCCTGTGTCAGTTTaGAGCATTATTAGCTATTTGCCCTGCAAACTTGGGAAGGGTTTT +
Preference number: 5 (lower is better)
Translates to: FHSISKYFIHQPVSV*SIISYLPCKLGKGF
Trigger: AAAACCCTTCCCAAGTTTGCAGGGCAAATAGCTAATAATGCTTCAAACTGACACAGGCTGGTGTATGAAGTACTTGGAAATGCTGTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679495.1
CDS CCA 90 bp TTGGGTATCTCTTCAGCAGCACCCCACTCTACTGGTACTAATTTATaGTACCAAGTTCATTTTCACGCTGCTGATAAAGACATACTCGAA +
Preference number: 5 (lower is better)
Translates to: LGISSAAPHSTGTNL*YQVHFHAADKDILE
Trigger: TTCGAGTATGTCTTTATCAGCAGCGTGAAAATGAACTTGGTACCATAAATTAGTACCAGTAGAGTGGGGTGCTGCTGAAGAGATACCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000616513.1
ENST00000649651.2
ENST00000680793.1
CDS-3UTR CAA 90 bp GAATGTCACTTCAAATTCCTGATCAGAGAATCTGCTTACAGATGCACGAGCACTAACATAGCTTCCAACTaGGCAACCCCCTATATACTT +
Preference number: 5 (lower is better)
Translates to: ECHFKFLIRESAYRCTSTNIASN*ATPYIL
Trigger: AAGTATATAGGGGGTTGCCAAGTTGGAAGCTATGTT...AGTGCTCGTGCATCTGTAAGCAGATTCTCTGATCAGGAATTTGAAGTGACATTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000679359.1
ENST00000681047.1
CDS TCA 90 bp ATTAAGCATCTAGTAATGAGATGCCAGGTTTTGGGGGTATGGAGATaGGAGAGAGTCTTTATCTTCAGAAGTTCAGTCCAGTGGAGAAAA +
Preference number: 5 (lower is better)
Translates to: IKHLVMRCQVLGVWR*ERVFIFRSSVQWRK
Trigger: TTTTCTCCACTGGACTGAACTTCTGAAGATAAAGACTCTCTCTCATCTCCATACCCCCAAAACCTGGCATCTCATTACTAGATGCTTAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519151.1
CDS-3UTR CAA 90 bp GTATACCAAGAATGGAAGCCGAAGGCTAGTCATCCATTTTCTTTTCAACACTTCAACATAGCTTCCAACTaGGCAACCCCCTATATACTT +
Preference number: 5 (lower is better)
Translates to: VYQEWKPKASHPFSFQHFNIASN*ATPYIL
Trigger: AAGTATATAGGGGGTTGCCAAGTTGGAAGCTATGTT...GAAGTGTTGAAAAGAAAATGGATGACTAGCCTTCGGCTTCCATTCTTGGTATAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000521508.2
ENST00000649340.2
ENST00000679359.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR CAA 90 bp TCATCTCTAACAAAAAGTTACAATGGTGTGTCAGAACATCCTGTGACTGACCCTAACATAGCTTCCAACTaGGCAACCCCCTATATACTT +
Preference number: 5 (lower is better)
Translates to: SSLTKSYNGVSEHPVTDPNIASN*ATPYIL
Trigger: AAGTATATAGGGGGTTGCCAAGTTGGAAGCTATGTT...AGGGTCAGTCACAGGATGTTCTGACACACCATTGTAACTTTTTGTTAGAGATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000681047.1
ENST00000681053.1
CDS-3UTR CAA 90 bp CTAAGGTTAATACATGGACGTTTTGCTGATCAAATGACACTGCTGCTTTCATTACCTCCGCTTGCAAAATaGAATAACAAGGACAAGGTG +
Preference number: 5 (lower is better)
Translates to: LRLIHGRFADQMTLLLSLPPLAK*NNKDKV
Trigger: CACCTTGTCCTTGTTATTCAATTTTGCAAGCGGAGG...TAATGAAAGCAGCAGTGTCATTTGATCAGCAAAACGTCCATGTATTAACCTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649708.2
CDS GCA 90 bp TTATTAGCTATTTGCCCTGCAAACTTGGGAAGGGTTTTTCTGCCTTaGAGTAGTATGAAGTCTGAAATCAGGACTATGACTTATCTATCT +
Preference number: 5 (lower is better)
Translates to: LLAICPANLGRVFLP*SSMKSEIRTMTYLS
Trigger: AGATAGATAAGTCATAGTCCTGATTTCAGACTTCATACTACTGCAAGGCAGAAAAACCCTTCCCAAGTTTGCAGGGCAAATAGCTAATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679495.1
CDS-3UTR CAA 90 bp GAAAACTTTTTCTTCCTTCACTACATCCTCAGGAATAAGGCAATTGAGTGGATAAACATAGCTTCCAACTaGGCAACCCCCTATATACTT +
Preference number: 5 (lower is better)
Translates to: ENFFFLHYILRNKAIEWINIASN*ATPYIL
Trigger: AAGTATATAGGGGGTTGCCAAGTTGGAAGCTATGTT...TATCCACTCAATTGCCTTATTCCTGAGGATGTAGTGAAGGAAGAAAAAGTTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000521508.2
ENST00000679359.1
ENST00000681047.1
ENST00000681053.1
CDS TCA 72 bp CGCTCTGTCTGTCGCCCAGGCGGGAGTACAGTGGCGTaGTCTTGGCTTATTGTAGCCTCCACCTCTCGGGTT +
Preference number: 6 (lower is better)
Translates to: RSVCRPGGSTVA*SWLIVASTSRV
Trigger: AACCCGAGAGGTGGAGGCTACAATAAGCCAAGATCACGCCACTGTACTCCCGCCTGGGCGACAGACAGAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519151.1
CDS GCA 72 bp CTGCAGCCCCAAACTCCTTGGCTCAAGCGATCCTCCTaGCTCAGACTCCTGAGAAGCTGGAACTACAGGTGC +
Preference number: 6 (lower is better)
Translates to: LQPQTPWLKRSS*LRLLRSWNYRC
Trigger: GCACCTGTAGTTCCAGCTTCTCAGGAGTCTGAGGCAGGAGGATCGCTTGAGCCAAGGAGTTTGGGGCTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649651.2
CDS TCA 72 bp GCAAGCACAACCAAGTCACATGAAGAAGCTCCTCAGTaGGAGAGATGCCCGACAGCCCCCAGCAGGTCCAGT +
Preference number: 6 (lower is better)
Translates to: ASTTKSHEEAPQ*ERCPTAPSRSS
Trigger: ACTGGACCTGCTGGGGGCTGTCGGGCATCTCTCTCACTGAGGAGCTTCTTCATGTGACTTGGTTGTGCTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519151.1
CDS GCA 72 bp AGCAAGGGCCCAGGCTTGCTCATACCATGTCCCCAATaGCAAGTACGATGCCTGGCACAGAGAAGGCATCCA +
Preference number: 6 (lower is better)
Translates to: SKGPGLLIPCPQ*QVRCLAQRRHP
Trigger: TGGATGCCTTCTCTGTGCCAGGCATCGTACTTGGCATTGGGGACATGGTATGAGCAAGCCTGGGCCCTTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649651.2
CDS CAA 90 bp GTCTCGCTCTGTCTGTCGCCCAGGCGGGAGTACAGTGGCGTGATCTaGGCTTATTGTAGCCTCCACCTCTCGGGTTCAAGTGATTTTCGT +
Preference number: 6 (lower is better)
Translates to: VSLCLSPRREYSGVI*AYCSLHLSGSSDFR
Trigger: ACGAAAATCACTTGAACCCGAGAGGTGGAGGCTACAATAAGCCAAGATCACGCCACTGTACTCCCGCCTGGGCGACAGACAGAGCGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519151.1
CDS TCA 72 bp GACGGGCAAGTACCCCTACAGAAGAGAAAACGTCTGTaGGCCCACACGACCGGCTGCTCACCTCAACAACTT +
Preference number: 6 (lower is better)
Translates to: DGQVPLQKRKRL*AHTTGCSPQQL
Trigger: AAGTTGTTGAGGTGAGCAGCCGGTCGTGTGGGCTCACAGACGTTTTCTCTTCTGTAGGGGTACTTGCCCGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000680950.1
ENST00000681226.1
CDS GCA 72 bp GGCTTCAGATGCCTCCAGCCCCAGCTGCCATCTAATTaGAACAGTATGATGGAGACCAAACATGGCAGCCCC +
Preference number: 6 (lower is better)
Translates to: GFRCLQPQLPSN*NSMMETKHGSP
Trigger: GGGGCTGCCATGTTTGGTCTCCATCATACTGTTGCAATTAGATGGCAGCTGGGGCTGGAGGCATCTGAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519151.1
CDS CAA 90 bp TTGCTGTCAGGTCGATTGAAGCTCTGCAAAAGCAAGGGCCCAGGCTaGCTCATACCATGTCCCCAATGCCAAGTACGATGCCTGGCACAG +
Preference number: 6 (lower is better)
Translates to: LLSGRLKLCKSKGPG*LIPCPQCQVRCLAQ
Trigger: CTGTGCCAGGCATCGTACTTGGCATTGGGGACATGGTATGAGCAAGCCTGGGCCCTTGCTTTTGCAGAGCTTCAATCGACCTGACAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649651.2
CDS TCA 72 bp AGCAGGTCCAGTTATCCCAGCCCAAGAACCAGAATGTaGGTGAAAAAGGCTTCAGATGCCTCCAGCCCCAGC +
Preference number: 6 (lower is better)
Translates to: SRSSYPSPRTRM*VKKASDASSPS
Trigger: GCTGGGGCTGGAGGCATCTGAAGCCTTTTTCACTCACATTCTGGTTCTTGGGCTGGGATAACTGGACCTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519151.1
CDS TCA 72 bp AAAGACACCCACAGGATGCTGGGGAAGCCTAAAGGATaGCAATCTAACTGCTCCTCTCTGGCCCCTTCCCAG +
Preference number: 6 (lower is better)
Translates to: KDTHRMLGKPKG*QSNCSSLAPSQ
Trigger: CTGGGAAGGGGCCAGAGAGGAGCAGTTAGATTGTCATCCTTTAGGCTTCCCCAGCATCCTGTGGGTGTCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519151.1
CDS CAA 72 bp GGTCGATTGAAGCTCTGCAAAAGCAAGGGCCCAGGCTaGCTCATACCATGTCCCCAATGCCAAGTACGATGC +
Preference number: 6 (lower is better)
Translates to: GRLKLCKSKGPG*LIPCPQCQVRC
Trigger: GCATCGTACTTGGCATTGGGGACATGGTATGAGCAAGCCTGGGCCCTTGCTTTTGCAGAGCTTCAATCGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649651.2
CDS TCA 72 bp GCCTCCAGCCCCAGCTGCCATCTAATTGCAACAGTATaGTGGAGACCAAACATGGCAGCCCCTAAACCATGT +
Preference number: 6 (lower is better)
Translates to: ASSPSCHLIATV*WRPNMAAPKPC
Trigger: ACATGGTTTAGGGGCTGCCATGTTTGGTCTCCATCATACTGTTGCAATTAGATGGCAGCTGGGGCTGGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519151.1
CDS CCA 72 bp GGAAGCCTAAAGGATGACAATCTAACTGCTCCTCTCTaGCCCCTTCCCAGTCACTCTTTACCCAGCAGCAAG +
Preference number: 6 (lower is better)
Translates to: GSLKDDNLTAPL*PLPSHSLPSSK
Trigger: CTTGCTGCTGGGTAAAGAGTGACTGGGAAGGGGCCAGAGAGGAGCAGTTAGATTGTCATCCTTTAGGCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519151.1
CDS TCA 72 bp GCTCACTACTCCAATGTACTGCCACAGATTAGGACTTaGGTCCGCCATCTCTCAACAACTTGCACAGGCACC +
Preference number: 6 (lower is better)
Translates to: AHYSNVLPQIRT*VRHLSTTCTGT
Trigger: GGTGCCTGTGCAAGTTGTTGAGAGATGGCGGACTCAAGTCCTAATCTGTGGCAGTACATTGGAGTAGTGAGC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679495.1
CDS TCA 72 bp GCCGGTATAAACAACATAAACTGCTTCAGGATACCCTaGGAGACTGAGAGCCGAGACTGCATCACTGCACTC +
Preference number: 6 (lower is better)
Translates to: AGINNINCFRIP*ETESRDCITAL
Trigger: GAGTGCAGTGATGCAGTCTCGGCTCTCAGTCTCTCAGGGTATCCTGAAGCAGTTTATGTTGTTTATACCGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519151.1
ENST00000679359.1
CDS GCA 72 bp CCCAAGAACCAGAATGTGAGTGAAAAAGGCTTCAGATaGCTCCAGCCCCAGCTGCCATCTAATTGCAACAGT +
Preference number: 6 (lower is better)
Translates to: PKNQNVSEKGFR*LQPQLPSNCNS
Trigger: ACTGTTGCAATTAGATGGCAGCTGGGGCTGGAGGCATCTGAAGCCTTTTTCACTCACATTCTGGTTCTTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519151.1
CDS GCA 72 bp CTGGTGTGCAGTCTCTTGCTCACTACTCCAATGTACTaGCACAGATTAGGACTTGAGTCCGCCATCTCTCAA +
Preference number: 6 (lower is better)
Translates to: LVCSLLLTTPMY*HRLGLESAISQ
Trigger: TTGAGAGATGGCGGACTCAAGTCCTAATCTGTGGCAGTACATTGGAGTAGTGAGCAAGAGACTGCACACCAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679495.1
CDS CAA 72 bp GACAGCTGTCATGTACGGAGTCCAACCAGCCCGAGATaGCTATGTTGTATGCAAGCACAACCAAGTCACATG +
Preference number: 6 (lower is better)
Translates to: DSCHVRSPTSPR*LCCMQAQPSHM
Trigger: CATGTGACTTGGTTGTGCTTGCATACAACATAGCAATCTCGGGCTGGTTGGACTCCGTACATGACAGCTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519151.1
CDS CAA 90 bp CTAGGAGAAGACAGCTGTCATGTACGGAGTCCAACCAGCCCGAGATaGCTATGTTGTATGCAAGCACAACCAAGTCACATGAAGAAGCTC +
Preference number: 6 (lower is better)
Translates to: LGEDSCHVRSPTSPR*LCCMQAQPSHMKKL
Trigger: GAGCTTCTTCATGTGACTTGGTTGTGCTTGCATACAACATAGCAATCTCGGGCTGGTTGGACTCCGTACATGACAGCTGTCTTCTCCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519151.1
CDS CAA 90 bp GATCTCGTGAACTTACTCACTATCACGAGAATAGCATGGGAAAGATaGGCCCCCATGATTCAATTACCTCCCCCTGGATCCCTCCCACAA +
Preference number: 6 (lower is better)
Translates to: DLVNLLTITRIAWER*APMIQLPPPGSLPQ
Trigger: TTGTGGGAGGGATCCAGGGGGAGGTAATTGAATCATGGGGGCCAATCTTTCCCATGCTATTCTCGTGATAGTGAGTAAGTTCACGAGATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000649651.2
CDS CCA 72 bp GTGTGCTACGCATTGATAAAGACACCCACAGGATGCTaGGGAAGCCTAAAGGATGACAATCTAACTGCTCCT +
Preference number: 6 (lower is better)
Translates to: VCYALIKTPTGC*GSLKDDNLTAP
Trigger: AGGAGCAGTTAGATTGTCATCCTTTAGGCTTCCCCAGCATCCTGTGGGTGTCTTTATCAATGCGTAGCACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519151.1
CDS CCA 72 bp ACAACGATCTCAGATTCCAACCCCAATCTACTCCAGTaGGTGGGACATTCAACCTTAGTGTGCTGTCAAGCT +
Preference number: 6 (lower is better)
Translates to: TTISDSNPNLLQ*VGHSTLVCCQA
Trigger: AGCTTGACAGCACACTAAGGTTGAATGTCCCACCCACTGGAGTAGATTGGGGTTGGAATCTGAGATCGTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679495.1
CDS CAA 90 bp GATCCCTCCCACAACATGTGGGCATTCTGGGAGATAAAATTCAACTaGAGGTTTGGGTGGGGTCACGGCCAAACCATATCACATAGTTTT +
Preference number: 6 (lower is better)
Translates to: DPSHNMWAFWEIKFN*RFGWGHGQTISHSF
Trigger: AAAACTATGTGATATGGTTTGGCCGTGACCCCACCCAAACCTCAAGTTGAATTTTATCTCCCAGAATGCCCACATGTTGTGGGAGGGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649651.2
CDS GCA 72 bp ACTGTGTGCTACGCATTGATAAAGACACCCACAGGATaGTGGGGAAGCCTAAAGGATGACAATCTAACTGCT +
Preference number: 6 (lower is better)
Translates to: TVCYALIKTPTG*WGSLKDDNLTA
Trigger: AGCAGTTAGATTGTCATCCTTTAGGCTTCCCCAGCATCCTGTGGGTGTCTTTATCAATGCGTAGCACACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519151.1
CDS CAA 72 bp CACAACATGTGGGCATTCTGGGAGATAAAATTCAACTaGAGGTTTGGGTGGGGTCACGGCCAAACCATATCA +
Preference number: 6 (lower is better)
Translates to: HNMWAFWEIKFN*RFGWGHGQTIS
Trigger: TGATATGGTTTGGCCGTGACCCCACCCAAACCTCAAGTTGAATTTTATCTCCCAGAATGCCCACATGTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649651.2
CDS CAA 72 bp AACTTACTCACTATCACGAGAATAGCATGGGAAAGATaGGCCCCCATGATTCAATTACCTCCCCCTGGATCC +
Preference number: 6 (lower is better)
Translates to: NLLTITRIAWER*APMIQLPPPGS
Trigger: GGATCCAGGGGGAGGTAATTGAATCATGGGGGCCAATCTTTCCCATGCTATTCTCGTGATAGTGAGTAAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000649651.2
CDS CAA 90 bp TGGCTCTGTGACTATTTTGACCAACAGAATATGGCAAAAGTGACATaGTGCCAGTTTCCCAACATAGACTCTAAGGGACTGGCAGCTCCT +
Preference number: 6 (lower is better)
Translates to: WLCDYFDQQNMAKVT*CQFPNIDSKGLAAP
Trigger: AGGAGCTGCCAGTCCCTTAGAGTCTATGTTGGGAAACTGGCACAATGTCACTTTTGCCATATTCTGTTGGTCAAAATAGTCACAGAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519151.1
CDS CCA 72 bp GCATTCTGGGAGATAAAATTCAACTTGAGGTTTGGGTaGGGTCACGGCCAAACCATATCACATAGTTTTCAC +
Preference number: 6 (lower is better)
Translates to: AFWEIKFNLRFG*GHGQTISHSFH
Trigger: GTGAAAACTATGTGATATGGTTTGGCCGTGACCCCACCCAAACCTCAAGTTGAATTTTATCTCCCAGAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649651.2
CDS CAA 72 bp CGGAGGTTGTCCTATGTATTATATTTAGTAGCATCTTaGGTCTTGACCCACTTAGATGCCAGTAGCACCCTC +
Preference number: 6 (lower is better)
Translates to: RRLSYVLYLVAS*VLTHLDASSTL
Trigger: GAGGGTGCTACTGGCATCTAAGTGGGTCAAGACCAAAGATGCTACTAAATATAATACATAGGACAACCTCCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649651.2
CDS GCA 72 bp ATTTGCCCTGCAAACTTGGGAAGGGTTTTTCTGCCTTaGAGTAGTATGAAGTCTGAAATCAGGACTATGACT +
Preference number: 6 (lower is better)
Translates to: ICPANLGRVFLP*SSMKSEIRTMT
Trigger: AGTCATAGTCCTGATTTCAGACTTCATACTACTGCAAGGCAGAAAAACCCTTCCCAAGTTTGCAGGGCAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679495.1
CDS CCA 72 bp TCTTCAGCAGCACCCCACTCTACTGGTACTAATTTATaGTACCAAGTTCATTTTCACGCTGCTGATAAAGAC +
Preference number: 6 (lower is better)
Translates to: SSAAPHSTGTNL*YQVHFHAADKD
Trigger: GTCTTTATCAGCAGCGTGAAAATGAACTTGGTACCATAAATTAGTACCAGTAGAGTGGGGTGCTGCTGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000616513.1
ENST00000649651.2
ENST00000680793.1
CDS TCA 72 bp ATTTCCAAGTACTTCATACACCAGCCTGTGTCAGTTTaGAGCATTATTAGCTATTTGCCCTGCAAACTTGGG +
Preference number: 6 (lower is better)
Translates to: ISKYFIHQPVSV*SIISYLPCKLG
Trigger: CCCAAGTTTGCAGGGCAAATAGCTAATAATGCTTCAAACTGACACAGGCTGGTGTATGAAGTACTTGGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679495.1
CDS GCA 72 bp TATTTTGACCAACAGAATATGGCAAAAGTGACATTGTaGCAGTTTCCCAACATAGACTCTAAGGGACTGGCA +
Preference number: 6 (lower is better)
Translates to: YFDQQNMAKVTL*QFPNIDSKGLA
Trigger: TGCCAGTCCCTTAGAGTCTATGTTGGGAAACTGGCACAATGTCACTTTTGCCATATTCTGTTGGTCAAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519151.1
CDS GCA 72 bp AAACAGACATGCAAAACAAATAACTGCAAAACTGTGTaGTACGCATTGATAAAGACACCCACAGGATGCTGG +
Preference number: 6 (lower is better)
Translates to: KQTCKTNNCKTV*YALIKTPTGCW
Trigger: CCAGCATCCTGTGGGTGTCTTTATCAATGCGTAGCACACAGTTTTGCAGTTATTTGTTTTGCATGTCTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519151.1
CDS CAA 72 bp GACTATTTTGACCAACAGAATATGGCAAAAGTGACATaGTGCCAGTTTCCCAACATAGACTCTAAGGGACTG +
Preference number: 6 (lower is better)
Translates to: DYFDQQNMAKVT*CQFPNIDSKGL
Trigger: CAGTCCCTTAGAGTCTATGTTGGGAAACTGGCACAATGTCACTTTTGCCATATTCTGTTGGTCAAAATAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519151.1
CDS CCA 72 bp GAAAATAGAATAAAGATGGTGTGTATGTTGGGATGGTaGTTGATGATGGACACAGGTATGCAGGCTGTATTT +
Preference number: 6 (lower is better)
Translates to: ENRIKMVCMLGW*LMMDTGMQAVF
Trigger: AAATACAGCCTGCATACCTGTGTCCATCATCAACCACCATCCCAACATACACACCATCTTTATTCTATTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649651.2
CDS CAA 72 bp AATAGAATAAAGATGGTGTGTATGTTGGGATGGTGGTaGATGATGGACACAGGTATGCAGGCTGTATTTACA +
Preference number: 6 (lower is better)
Translates to: NRIKMVCMLGWW*MMDTGMQAVFT
Trigger: TGTAAATACAGCCTGCATACCTGTGTCCATCATCAACCACCATCCCAACATACACACCATCTTTATTCTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649651.2
CDS TCA 72 bp CATGATCTAATACTACTACCTTCCCTTATGTACCTCTaGATGAGCTGCCAAAAACCCACTAATGTTCTACTT +
Preference number: 6 (lower is better)
Translates to: HDLILLPSLMYL*MSCQKPTNVLL
Trigger: AAGTAGAACATTAGTGGGTTTTTGGCAGCTCATTCAGAGGTACATAAGGGAAGGTAGTAGTATTAGATCATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649651.2
CDS CAA 90 bp GTTCCTATTGTGAACAAATCTCATGTGGGATTTCCTACTGTGTACTaGAAGAGGTATTTGACTCTATTTGAAATCCCACATGAGCACTTT +
Preference number: 6 (lower is better)
Translates to: VPIVNKSHVGFPTVY*KRYLTLFEIPHEHF
Trigger: AAAGTGCTCATGTGGGATTTCAAATAGAGTCAAATACCTCTTCAAGTACACAGTAGGAAATCCCACATGAGATTTGTTCACAATAGGAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649651.2
CDS CAA 72 bp GTGAACAAATCTCATGTGGGATTTCCTACTGTGTACTaGAAGAGGTATTTGACTCTATTTGAAATCCCACAT +
Preference number: 6 (lower is better)
Translates to: VNKSHVGFPTVY*KRYLTLFEIPH
Trigger: ATGTGGGATTTCAAATAGAGTCAAATACCTCTTCAAGTACACAGTAGGAAATCCCACATGAGATTTGTTCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649651.2
CDS GCA 72 bp GCTTGGATAGTCTGGTCATCTCAATTGTACAATAAGTaGTCCATTACTTTACTTTCCTTAAAATACAACGAT +
Preference number: 6 (lower is better)
Translates to: AWIVWSSQLYNK*SITLLSLKYND
Trigger: ATCGTTGTATTTTAAGGAAAGTAAAGTAATGGAGCACTTATTGTACAATTGAGATGACCAGACTATCCAAGC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679495.1