Pregenerated sensors for ALG10B (Homo sapiens)
Ensembl gene IDs: ENSG00000175548Ensembl transcript IDs: ENST00000308742.9
Found 63 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGAAAGCTTACAAAATTTGTGTTGGGGCCGCATTCAAAGCCATCCTaGGCTGCATGTGGCCTGTGGGTTGAACAAGCTTGCACTAAGGCA | + |
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Preference number: 1 (lower is better) Translates to: RKLTKFVLGPHSKPS*AACGLWVEQACTKA Trigger: TGCCTTAGTGCAAGCTTGTTCAACCCACAGGCCACATGCAGCCCAGGATGGCTTTGAATGCGGCCCCAACACAAATTTTGTAAGCTTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308742.9 |
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| 3UTR CCA 90 bp | ACAGGCTTGGGAGTCATACCAATCTATGTTCATTTAGTGACAGTGTaGACTTTGGGCAAATCACCTGACCTGACCGACCTTCAGTTTCTT | + |
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Preference number: 1 (lower is better) Translates to: TGLGVIPIYVHLVTV*TLGKSPDLTDLQFL Trigger: AAGAAACTGAAGGTCGGTCAGGTCAGGTGATTTGCCCAAAGTCCACACTGTCACTAAATGAACATAGATTGGTATGACTCCCAAGCCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308742.9 |
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| 3UTR TCA 90 bp | AAGTCTGCACTCTATGTTCATTGCAGACAAGTCACAATAACCAAGTaGTTCGATCAACCTAAGTGTCCATCCATGGATGAATGGATAAAG | + |
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Preference number: 1 (lower is better) Translates to: KSALYVHCRQVTITK*FDQPKCPSMDEWIK Trigger: CTTTATCCATTCATCCATGGATGGACACTTAGGTTGATCGAATCACTTGGTTATTGTGACTTGTCTGCAATGAACATAGAGTGCAGACTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308742.9 |
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| 3UTR CCA 90 bp | GACAATGTCTACTCAGAACATGTGAATACAAACTTACTTGGAACATaGGTCTTTGTAAACATAATTAAGGGTCTCCAGACACAATCACCC | + |
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Preference number: 1 (lower is better) Translates to: DNVYSEHVNTNLLGT*VFVNIIKGLQTQSP Trigger: GGGTGATTGTGTCTGGAGACCCTTAATTATGTTTACAAAGACCCATGTTCCAAGTAAGTTTGTATTCACATGTTCTGAGTAGACATTGTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308742.9 |
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| 3UTR GCA 90 bp | TCCATCATAACAATAGAGTTAAGAATATTGATTTTGGAGTCAGGCTaGCTGGTTACGAATCCCAGCTCAGACAGTTATTTTGTAATCTTG | + |
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Preference number: 1 (lower is better) Translates to: SIITIELRILILESG*LVTNPSSDSYFVIL Trigger: CAAGATTACAAAATAACTGTCTGAGCTGGGATTCGTAACCAGGCAGCCTGACTCCAAAATCAATATTCTTAACTCTATTGTTATGATGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308742.9 |
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| 3UTR TCA 90 bp | CCTAAAATGTCCTTTAGTAACTGTCATGGACTGAAAAGTATCCCATaGAGAGACAATGTCTACTCAGAACATGTGAATACAAACTTACTT | + |
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Preference number: 1 (lower is better) Translates to: PKMSFSNCHGLKSIP*RDNVYSEHVNTNLL Trigger: AAGTAAGTTTGTATTCACATGTTCTGAGTAGACATTGTCTCTTCATGGGATACTTTTCAGTCCATGACAGTTACTAAAGGACATTTTAGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308742.9 |
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| 3UTR-3UTR TCA 90 bp | AAATCACCTGACCTGACCGACCTTCAGTTTCTTCAGCAGTCAAAGAGAAATCAAAGGTGGAGGTTTCAGTaGGCCAAGATCGCGCCATTG | + |
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Preference number: 2 (lower is better) Translates to: KSPDLTDLQFLQQSKRNQRWRFQ*AKIAPL Trigger: CAATGGCGCGATCTTGGCTCACTGAAACCTCCACCT...TTGATTTCTCTTTGACTGCTGAAGAAACTGAAGGTCGGTCAGGTCAGGTGATTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308742.9 |
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| 3UTR-3UTR TCA 90 bp | CCTAGATCAGGGTGGGCCCTACATTCAAAGACACTGTCCTTAAAAGGTAATGAAAGGCAGAGACTGGAGTaGAGATTGCTGTCTGCAATA | + |
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Preference number: 2 (lower is better) Translates to: PRSGWALHSKTLSLKGNERQRLE*RLLSAI Trigger: TATTGCAGACAGCAATCTTCACTCCAGTCTCTGCCT...TTCATTACCTTTTAAGGACAGTGTCTTTGAATGTAGGGCCCACCCTGATCTAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308742.9 |
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| 3UTR-3UTR CCA 90 bp | AAATCACCTGACCTGACCGACCTTCAGTTTCTTCAGCAGTCAAAGAGAAATCAAATCTTTTGGCTTCCCTaGGCCACACTGGAAGAACCA | + |
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Preference number: 2 (lower is better) Translates to: KSPDLTDLQFLQQSKRNQIFWLP*ATLEEP Trigger: TGGTTCTTCCAGTGTGGCCCAGGGAAGCCAAAAGAT...TTGATTTCTCTTTGACTGCTGAAGAAACTGAAGGTCGGTCAGGTCAGGTGATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308742.9 |
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| 3UTR-3UTR CCA 90 bp | TGGGCCCTACATTCAAAGACACTGTCCTTAAAAGGTAATGAAAAGACAGAGGGAAAGCACCCAAGTTTGTaGTCATTTGTTATGGCAGCC | + |
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Preference number: 2 (lower is better) Translates to: WALHSKTLSLKGNEKTEGKHPSL*SFVMAA Trigger: GGCTGCCATAACAAATGACCACAAACTTGGGTGCTT...TCCCTCTGTCTTTTCATTACCTTTTAAGGACAGTGTCTTTGAATGTAGGGCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308742.9 |
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| 3UTR-3UTR CCA 90 bp | AAATCACCTGACCTGACCGACCTTCAGTTTCTTCAGCAGTCAAAGAGAAATCAACTGGAAGAACCATCTTaGGCCACACATAAAATACAC | + |
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Preference number: 2 (lower is better) Translates to: KSPDLTDLQFLQQSKRNQLEEPS*ATHKIH Trigger: GTGTATTTTATGTGTGGCCCAAGATGGTTCTTCCAG...TTGATTTCTCTTTGACTGCTGAAGAAACTGAAGGTCGGTCAGGTCAGGTGATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308742.9 |
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| 3UTR CAA 90 bp | TCTCCTGATCCAACAATCCCACTTCTGGCTATTTATCCAGAAGATTaGAAATCCGTATGTCAAAGAGAAGTCTGCACTCTATGTTCATTG | + |
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Preference number: 2 (lower is better) Translates to: SPDPTIPLLAIYPED*KSVCQREVCTLCSL Trigger: CAATGAACATAGAGTGCAGACTTCTCTTTGACATACGGATTTCAAATCTTCTGGATAAATAGCCAGAAGTGGGATTGTTGGATCAGGAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308742.9 |
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| 3UTR CAA 90 bp | TTCATGCCTTTCTCCATCATAACAATAGAGTTAAGAATATTGATTTaGGAGTCAGGCTGCCTGGTTACGAATCCCAGCTCAGACAGTTAT | + |
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Preference number: 2 (lower is better) Translates to: FMPFSIITIELRILI*ESGCLVTNPSSDSY Trigger: ATAACTGTCTGAGCTGGGATTCGTAACCAGGCAGCCTGACTCCAAAATCAATATTCTTAACTCTATTGTTATGATGGAGAAAGGCATGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308742.9 |
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| 3UTR-3UTR TCA 90 bp | ACTCCAAGAATTGCAGACAGCCACAAGATATTAGGAAACAGACATAGAATGGATAGGAACCAACTCTGCTaGCACTTTGATTTTAGACTT | + |
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Preference number: 2 (lower is better) Translates to: TPRIADSHKILGNRHRMDRNQLC*HFDFRL Trigger: AAGTCTAAAATCAAAGTGTCAGCAGAGTTGGTTCCT...ATCCATTCTATGTCTGTTTCCTAATATCTTGTGGCTGTCTGCAATTCTTGGAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308742.9 |
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| 3UTR-3UTR GCA 90 bp | AAATCACCTGACCTGACCGACCTTCAGTTTCTTCAGCAGTCAAAGAGAAATCAATGGGTTGAACAAGCTTaGACTAAGGCAAATAAAAAT | + |
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Preference number: 2 (lower is better) Translates to: KSPDLTDLQFLQQSKRNQWVEQA*TKANKN Trigger: ATTTTTATTTGCCTTAGTGCAAGCTTGTTCAACCCA...TTGATTTCTCTTTGACTGCTGAAGAAACTGAAGGTCGGTCAGGTCAGGTGATTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000308742.9 |
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| 3UTR CCA 72 bp | ACAAAATTTGTGTTGGGGCCGCATTCAAAGCCATCCTaGGCTGCATGTGGCCTGTGGGTTGAACAAGCTTGC | + |
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Preference number: 3 (lower is better) Translates to: TKFVLGPHSKPS*AACGLWVEQAC Trigger: GCAAGCTTGTTCAACCCACAGGCCACATGCAGCCCAGGATGGCTTTGAATGCGGCCCCAACACAAATTTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308742.9 |
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| 3UTR CCA 72 bp | CAGAGGGAAAGGCCGTGTGAACGCAGAGGCAGAGACTaGAGTGAAGATTGCTGTCTGCAATACTTAGACAAG | + |
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Preference number: 3 (lower is better) Translates to: QRERPCERRGRD*SEDCCLQYLDK Trigger: CTTGTCTAAGTATTGCAGACAGCAATCTTCACTCCAGTCTCTGCCTCTGCGTTCACACGGCCTTTCCCTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308742.9 |
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| 3UTR TCA 72 bp | TCATTTAGTGACAGTGTGGACTTTGGGCAAATCACCTaGCCTGACCGACCTTCAGTTTCTTCAGCAGTCAAA | + |
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Preference number: 3 (lower is better) Translates to: SFSDSVDFGQIT*PDRPSVSSAVK Trigger: TTTGACTGCTGAAGAAACTGAAGGTCGGTCAGGTCAGGTGATTTGCCCAAAGTCCACACTGTCACTAAATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308742.9 |
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| 3UTR TCA 72 bp | TGGTTGCTAGAGGCCGGGGATGTGGGAATAGGGAGATaGCAATCAAAAGATACAAAGCCTCAATTAGATAGA | + |
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Preference number: 3 (lower is better) Translates to: WLLEAGDVGIGR*QSKDTKPQLDR Trigger: TCTATCTAATTGAGGCTTTGTATCTTTTGATTGTCATCTCCCTATTCCCACATCCCCGGCCTCTAGCAACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308742.9 |
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| 3UTR-3UTR CAA 90 bp | AAATCACCTGACCTGACCGACCTTCAGTTTCTTCAGCAGTCAAAGAGAAATCAAATCCTACCCCAGCAGTaGTTCCCTAATCTACAAAGT | + |
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Preference number: 3 (lower is better) Translates to: KSPDLTDLQFLQQSKRNQILPQQ*FPNLQS Trigger: ACTTTGTAGATTAGGGAACAACTGCTGGGGTAGGAT...TTGATTTCTCTTTGACTGCTGAAGAAACTGAAGGTCGGTCAGGTCAGGTGATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308742.9 |
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| 3UTR TCA 72 bp | CTCTATGTTCATTGCAGACAAGTCACAATAACCAAGTaGTTCGATCAACCTAAGTGTCCATCCATGGATGAA | + |
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Preference number: 3 (lower is better) Translates to: LYVHCRQVTITK*FDQPKCPSMDE Trigger: TTCATCCATGGATGGACACTTAGGTTGATCGAATCACTTGGTTATTGTGACTTGTCTGCAATGAACATAGAG 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308742.9 |
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| 3UTR GCA 72 bp | AGTACAAAAATAACACGTCATGAATGGTTTGGAAACTaGAGAGAGCAAACATGGATTTTCACCTCTCTCTCC | + |
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Preference number: 3 (lower is better) Translates to: STKITRHEWFGN*REQTWIFTSLS Trigger: GGAGAGAGAGGTGAAAATCCATGTTTGCTCTCTGCAGTTTCCAAACCATTCATGACGTGTTATTTTTGTACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000308742.9 |
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| 3UTR TCA 72 bp | CAACAATCCCACTTCTGGCTATTTATCCAGAAGATTTaGAATCCGTATGTCAAAGAGAAGTCTGCACTCTAT | + |
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Preference number: 3 (lower is better) Translates to: QQSHFWLFIQKI*NPYVKEKSALY Trigger: ATAGAGTGCAGACTTCTCTTTGACATACGGATTTCAAATCTTCTGGATAAATAGCCAGAAGTGGGATTGTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308742.9 |
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| 3UTR TCA 72 bp | TCCTTTAGTAACTGTCATGGACTGAAAAGTATCCCATaGAGAGACAATGTCTACTCAGAACATGTGAATACA | + |
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Preference number: 3 (lower is better) Translates to: SFSNCHGLKSIP*RDNVYSEHVNT Trigger: TGTATTCACATGTTCTGAGTAGACATTGTCTCTTCATGGGATACTTTTCAGTCCATGACAGTTACTAAAGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308742.9 |
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| 3UTR TCA 72 bp | ATTATCCTAAAATGTCCTTTAGTAACTGTCATGGACTaGAAAGTATCCCATGAAGAGACAATGTCTACTCAG | + |
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Preference number: 3 (lower is better) Translates to: IILKCPLVTVMD*KVSHEETMSTQ Trigger: CTGAGTAGACATTGTCTCTTCATGGGATACTTTTCAGTCCATGACAGTTACTAAAGGACATTTTAGGATAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308742.9 |
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| 3UTR CCA 72 bp | ATGACTATATCCAGTACAAAAATAACACGTCATGAATaGTTTGGAAACTGCAGAGAGCAAACATGGATTTTC | + |
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Preference number: 3 (lower is better) Translates to: MTISSTKITRHE*FGNCREQTWIF Trigger: GAAAATCCATGTTTGCTCTCTGCAGTTTCCAAACCATTCATGACGTGTTATTTTTGTACTGGATATAGTCAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000308742.9 |
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| 3UTR TCA 72 bp | AAAAATGACTATATCCAGTACAAAAATAACACGTCATaGATGGTTTGGAAACTGCAGAGAGCAAACATGGAT | + |
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Preference number: 3 (lower is better) Translates to: KNDYIQYKNNTS*MVWKLQRANMD Trigger: ATCCATGTTTGCTCTCTGCAGTTTCCAAACCATTCATGACGTGTTATTTTTGTACTGGATATAGTCATTTTT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000308742.9 |
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| CDS-3UTR TCA 90 bp | CCTAGATCAGGGTGGGCCCTACATTCAAAGACACTGTCCTTAAAAGGTAATGAAGGCAGGTGGATTACCTaGGGTCAGGAGTTCGAGACC | + |
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Preference number: 4 (lower is better) Translates to: PRSGWALHSKTLSLKGNEGRWIT*GQEFET Trigger: GGTCTCGAACTCCTGACCTCAGGTAATCCACCTGCC...TTCATTACCTTTTAAGGACAGTGTCTTTGAATGTAGGGCCCACCCTGATCTAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308742.9 |
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| CDS-3UTR TCA 90 bp | TGGGCCCTACATTCAAAGACACTGTCCTTAAAAGGTAATGAAAAGACAGAGGGAGCCTGGCTAACACGGTaGAACCCCGGCTCTACTAAA | + |
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Preference number: 4 (lower is better) Translates to: WALHSKTLSLKGNEKTEGAWLTR*NPGSTK Trigger: TTTAGTAGAGCCGGGGTTTCACCGTGTTAGCCAGGC...TCCCTCTGTCTTTTCATTACCTTTTAAGGACAGTGTCTTTGAATGTAGGGCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000308742.9 |
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| CDS-3UTR CCA 90 bp | AAATCACCTGACCTGACCGACCTTCAGTTTCTTCAGCAGTCAAAGAGAAATCAAGGGTCTCCAATCTTTTaGCTTCCCTGGGCCACACTG | + |
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Preference number: 4 (lower is better) Translates to: KSPDLTDLQFLQQSKRNQGSPIF*LPWATL Trigger: CAGTGTGGCCCAGGGAAGCCAAAAGATTGGAGACCC...TTGATTTCTCTTTGACTGCTGAAGAAACTGAAGGTCGGTCAGGTCAGGTGATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308742.9 |
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| CDS-3UTR CCA 90 bp | AAATCACCTGACCTGACCGACCTTCAGTTTCTTCAGCAGTCAAAGAGAAATCAACATTGCATTCCAGCCTaGGGGACAAGAGCGAGACTT | + |
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Preference number: 4 (lower is better) Translates to: KSPDLTDLQFLQQSKRNQHCIPA*GTRARL Trigger: AAGTCTCGCTCTTGTCCCCCAGGCTGGAATGCAATG...TTGATTTCTCTTTGACTGCTGAAGAAACTGAAGGTCGGTCAGGTCAGGTGATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308742.9 |
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| CDS-3UTR CCA 90 bp | CCTAGATCAGGGTGGGCCCTACATTCAAAGACACTGTCCTTAAAAGGTAATGAAATCTTTTGGCTTCCCTaGGCCACACTGGAAGAACCA | + |
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Preference number: 4 (lower is better) Translates to: PRSGWALHSKTLSLKGNEIFWLP*ATLEEP Trigger: TGGTTCTTCCAGTGTGGCCCAGGGAAGCCAAAAGAT...TTCATTACCTTTTAAGGACAGTGTCTTTGAATGTAGGGCCCACCCTGATCTAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308742.9 |
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| CDS-3UTR TCA 90 bp | ACTCCAAGAATTGCAGACAGCCACAAGATATTAGGAAACAGACATAGAATGGATAGGTGGAGGTTTCAGTaGGCCAAGATCGCGCCATTG | + |
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Preference number: 4 (lower is better) Translates to: TPRIADSHKILGNRHRMDRWRFQ*AKIAPL Trigger: CAATGGCGCGATCTTGGCTCACTGAAACCTCCACCT...ATCCATTCTATGTCTGTTTCCTAATATCTTGTGGCTGTCTGCAATTCTTGGAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308742.9 |
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| CDS-3UTR TCA 90 bp | TGGGCCCTACATTCAAAGACACTGTCCTTAAAAGGTAATGAAAAGACAGAGGGATTGAGGCAGGTGTTTTaGGACCAGCCCACACAACAT | + |
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Preference number: 4 (lower is better) Translates to: WALHSKTLSLKGNEKTEGLRQVF*DQPTQH Trigger: ATGTTGTGTGGGCTGGTCTCAAAACACCTGCCTCAA...TCCCTCTGTCTTTTCATTACCTTTTAAGGACAGTGTCTTTGAATGTAGGGCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000308742.9 |
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| CDS-3UTR CCA 90 bp | AAATCACCTGACCTGACCGACCTTCAGTTTCTTCAGCAGTCAAAGAGAAATCAAATTAGCCAGGCTTGGTaGTGGGCGCCTATAATCTCA | + |
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Preference number: 4 (lower is better) Translates to: KSPDLTDLQFLQQSKRNQISQAW*WAPIIS Trigger: TGAGATTATAGGCGCCCACCACCAAGCCTGGCTAAT...TTGATTTCTCTTTGACTGCTGAAGAAACTGAAGGTCGGTCAGGTCAGGTGATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308742.9 |
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| CDS-3UTR TCA 90 bp | TGGGCCCTACATTCAAAGACACTGTCCTTAAAAGGTAATGAAAAGACAGAGGGAAGGCAGAGACTGGAGTaGAGATTGCTGTCTGCAATA | + |
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Preference number: 4 (lower is better) Translates to: WALHSKTLSLKGNEKTEGRQRLE*RLLSAI Trigger: TATTGCAGACAGCAATCTTCACTCCAGTCTCTGCCT...TCCCTCTGTCTTTTCATTACCTTTTAAGGACAGTGTCTTTGAATGTAGGGCCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308742.9 |
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| CDS-3UTR CCA 90 bp | ACTCCAAGAATTGCAGACAGCCACAAGATATTAGGAAACAGACATAGAATGGATCGCAGAGGCAGAGACTaGAGTGAAGATTGCTGTCTG | + |
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Preference number: 4 (lower is better) Translates to: TPRIADSHKILGNRHRMDRRGRD*SEDCCL Trigger: CAGACAGCAATCTTCACTCCAGTCTCTGCCTCTGCG...ATCCATTCTATGTCTGTTTCCTAATATCTTGTGGCTGTCTGCAATTCTTGGAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308742.9 |
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| CDS-3UTR CCA 90 bp | AAATCACCTGACCTGACCGACCTTCAGTTTCTTCAGCAGTCAAAGAGAAATCAAAAGCACCCAAGTTTGTaGTCATTTGTTATGGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: KSPDLTDLQFLQQSKRNQKHPSL*SFVMAA Trigger: GGCTGCCATAACAAATGACCACAAACTTGGGTGCTT...TTGATTTCTCTTTGACTGCTGAAGAAACTGAAGGTCGGTCAGGTCAGGTGATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308742.9 |
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| CDS-3UTR CCA 90 bp | CCTAGATCAGGGTGGGCCCTACATTCAAAGACACTGTCCTTAAAAGGTAATGAACTGGAAGAACCATCTTaGGCCACACATAAAATACAC | + |
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Preference number: 4 (lower is better) Translates to: PRSGWALHSKTLSLKGNELEEPS*ATHKIH Trigger: GTGTATTTTATGTGTGGCCCAAGATGGTTCTTCCAG...TTCATTACCTTTTAAGGACAGTGTCTTTGAATGTAGGGCCCACCCTGATCTAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308742.9 |
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| 3UTR CAA 72 bp | ATACCAATCTATGTTCATTTAGTGACAGTGTGGACTTaGGGCAAATCACCTGACCTGACCGACCTTCAGTTT | + |
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Preference number: 4 (lower is better) Translates to: IPIYVHLVTVWT*GKSPDLTDLQF Trigger: AAACTGAAGGTCGGTCAGGTCAGGTGATTTGCCCAAAGTCCACACTGTCACTAAATGAACATAGATTGGTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308742.9 |
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| CDS-3UTR TCA 90 bp | CCTAGATCAGGGTGGGCCCTACATTCAAAGACACTGTCCTTAAAAGGTAATGAAGGACATTATGGTAAGTaGAATAAGCCAAGCACAGAA | + |
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Preference number: 4 (lower is better) Translates to: PRSGWALHSKTLSLKGNEGHYGK*NKPSTE Trigger: TTCTGTGCTTGGCTTATTTCACTTACCATAATGTCC...TTCATTACCTTTTAAGGACAGTGTCTTTGAATGTAGGGCCCACCCTGATCTAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308742.9 |
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| CDS-3UTR TCA 90 bp | AAATCACCTGACCTGACCGACCTTCAGTTTCTTCAGCAGTCAAAGAGAAATCAAAGGAACCAACTCTGCTaGCACTTTGATTTTAGACTT | + |
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Preference number: 4 (lower is better) Translates to: KSPDLTDLQFLQQSKRNQRNQLC*HFDFRL Trigger: AAGTCTAAAATCAAAGTGTCAGCAGAGTTGGTTCCT...TTGATTTCTCTTTGACTGCTGAAGAAACTGAAGGTCGGTCAGGTCAGGTGATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308742.9 |
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| CDS-3UTR TCA 90 bp | TGGGCCCTACATTCAAAGACACTGTCCTTAAAAGGTAATGAAAAGACAGAGGGAGTGGGAATAGGGAGATaGCAATCAAAAGATACAAAG | + |
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Preference number: 4 (lower is better) Translates to: WALHSKTLSLKGNEKTEGVGIGR*QSKDTK Trigger: CTTTGTATCTTTTGATTGTCATCTCCCTATTCCCAC...TCCCTCTGTCTTTTCATTACCTTTTAAGGACAGTGTCTTTGAATGTAGGGCCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000308742.9 |
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| CDS-3UTR TCA 90 bp | AAATCACCTGACCTGACCGACCTTCAGTTTCTTCAGCAGTCAAAGAGAAATCAAGTGTCCATCCATGGATaGATGGATAAAGAAAATGTG | + |
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Preference number: 4 (lower is better) Translates to: KSPDLTDLQFLQQSKRNQVSIHG*MDKENV Trigger: CACATTTTCTTTATCCATTCATCCATGGATGGACAC...TTGATTTCTCTTTGACTGCTGAAGAAACTGAAGGTCGGTCAGGTCAGGTGATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308742.9 |
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| CDS-3UTR TCA 90 bp | CCTAGATCAGGGTGGGCCCTACATTCAAAGACACTGTCCTTAAAAGGTAATGAACTAATTGTTGACCTCTaGTTTACACTTCAGGCAATA | + |
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Preference number: 4 (lower is better) Translates to: PRSGWALHSKTLSLKGNELIVDL*FTLQAI Trigger: TATTGCCTGAAGTGTAAATCAGAGGTCAACAATTAG...TTCATTACCTTTTAAGGACAGTGTCTTTGAATGTAGGGCCCACCCTGATCTAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308742.9 |
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| CDS-3UTR GCA 90 bp | CCTAGATCAGGGTGGGCCCTACATTCAAAGACACTGTCCTTAAAAGGTAATGAAAAGAACTCCAAGAATTaGAGACAGCCACAAGATATT | + |
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Preference number: 4 (lower is better) Translates to: PRSGWALHSKTLSLKGNEKNSKN*RQPQDI Trigger: AATATCTTGTGGCTGTCTGCAATTCTTGGAGTTCTT...TTCATTACCTTTTAAGGACAGTGTCTTTGAATGTAGGGCCCACCCTGATCTAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308742.9 |
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| CDS-3UTR CCA 90 bp | CCTAGATCAGGGTGGGCCCTACATTCAAAGACACTGTCCTTAAAAGGTAATGAACAACAATCCCACTTCTaGCTATTTATCCAGAAGATT | + |
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Preference number: 4 (lower is better) Translates to: PRSGWALHSKTLSLKGNEQQSHF*LFIQKI Trigger: AATCTTCTGGATAAATAGCCAGAAGTGGGATTGTTG...TTCATTACCTTTTAAGGACAGTGTCTTTGAATGTAGGGCCCACCCTGATCTAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308742.9 |
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| CDS-3UTR TCA 90 bp | TGGGCCCTACATTCAAAGACACTGTCCTTAAAAGGTAATGAAAAGACAGAGGGACTTTATAACAGTGGCTaGTACAATGTTACACGAGTT | + |
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Preference number: 4 (lower is better) Translates to: WALHSKTLSLKGNEKTEGLYNSG*YNVTRV Trigger: AACTCGTGTAACATTGTATCAGCCACTGTTATAAAG...TCCCTCTGTCTTTTCATTACCTTTTAAGGACAGTGTCTTTGAATGTAGGGCCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308742.9 |
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| 3UTR CAA 72 bp | TCCGTATGTCAAAGAGAAGTCTGCACTCTATGTTCATaGCAGACAAGTCACAATAACCAAGTGATTCGATCA | + |
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Preference number: 4 (lower is better) Translates to: SVCQREVCTLCS*QTSHNNQVIRS Trigger: TGATCGAATCACTTGGTTATTGTGACTTGTCTGCAATGAACATAGAGTGCAGACTTCTCTTTGACATACGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308742.9 |
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| 3UTR CAA 72 bp | CCAACAATCCCACTTCTGGCTATTTATCCAGAAGATTaGAAATCCGTATGTCAAAGAGAAGTCTGCACTCTA | + |
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Preference number: 4 (lower is better) Translates to: PTIPLLAIYPED*KSVCQREVCTL Trigger: TAGAGTGCAGACTTCTCTTTGACATACGGATTTCAAATCTTCTGGATAAATAGCCAGAAGTGGGATTGTTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308742.9 |
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| CDS-3UTR TCA 90 bp | ACTCCAAGAATTGCAGACAGCCACAAGATATTAGGAAACAGACATAGAATGGATCTGAAAAGTATCCCATaGAGAGACAATGTCTACTCA | + |
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Preference number: 4 (lower is better) Translates to: TPRIADSHKILGNRHRMDLKSIP*RDNVYS Trigger: TGAGTAGACATTGTCTCTTCATGGGATACTTTTCAG...ATCCATTCTATGTCTGTTTCCTAATATCTTGTGGCTGTCTGCAATTCTTGGAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308742.9 |
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| CDS-3UTR TCA 90 bp | ACTCCAAGAATTGCAGACAGCCACAAGATATTAGGAAACAGACATAGAATGGATGTCACAATAACCAAGTaGTTCGATCAACCTAAGTGT | + |
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Preference number: 4 (lower is better) Translates to: TPRIADSHKILGNRHRMDVTITK*FDQPKC Trigger: ACACTTAGGTTGATCGAATCACTTGGTTATTGTGAC...ATCCATTCTATGTCTGTTTCCTAATATCTTGTGGCTGTCTGCAATTCTTGGAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308742.9 |
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| CDS-3UTR GCA 90 bp | TGGGCCCTACATTCAAAGACACTGTCCTTAAAAGGTAATGAAAAGACAGAGGGATGGGTTGAACAAGCTTaGACTAAGGCAAATAAAAAT | + |
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Preference number: 4 (lower is better) Translates to: WALHSKTLSLKGNEKTEGWVEQA*TKANKN Trigger: ATTTTTATTTGCCTTAGTGCAAGCTTGTTCAACCCA...TCCCTCTGTCTTTTCATTACCTTTTAAGGACAGTGTCTTTGAATGTAGGGCCCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000308742.9 |
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| CDS-3UTR GCA 90 bp | ACTCCAAGAATTGCAGACAGCCACAAGATATTAGGAAACAGACATAGAATGGATGAATGGTTTGGAAACTaGAGAGAGCAAACATGGATT | + |
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Preference number: 4 (lower is better) Translates to: TPRIADSHKILGNRHRMDEWFGN*REQTWI Trigger: AATCCATGTTTGCTCTCTGCAGTTTCCAAACCATTC...ATCCATTCTATGTCTGTTTCCTAATATCTTGTGGCTGTCTGCAATTCTTGGAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308742.9 |
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| CDS-3UTR CCA 90 bp | ACTCCAAGAATTGCAGACAGCCACAAGATATTAGGAAACAGACATAGAATGGATTCATTTGCAACAATATaGATGATCGTGGAGGACATT | + |
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Preference number: 4 (lower is better) Translates to: TPRIADSHKILGNRHRMDSFATI*MIVEDI Trigger: AATGTCCTCCACGATCATCCATATTGTTGCAAATGA...ATCCATTCTATGTCTGTTTCCTAATATCTTGTGGCTGTCTGCAATTCTTGGAGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308742.9 |
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| CDS-3UTR CAA 90 bp | AAATCACCTGACCTGACCGACCTTCAGTTTCTTCAGCAGTCAAAGAGAAATCAAGCCAAGATCGCGCCATaGCATTCCAGCCTGGGGGAC | + |
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Preference number: 5 (lower is better) Translates to: KSPDLTDLQFLQQSKRNQAKIAP*HSSLGD Trigger: GTCCCCCAGGCTGGAATGCAATGGCGCGATCTTGGC...TTGATTTCTCTTTGACTGCTGAAGAAACTGAAGGTCGGTCAGGTCAGGTGATTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000308742.9 |
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| CDS-3UTR CAA 90 bp | TGGGCCCTACATTCAAAGACACTGTCCTTAAAAGGTAATGAAAAGACAGAGGGAGGGGTCTCCAATCTTTaGGCTTCCCTGGGCCACACT | + |
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Preference number: 5 (lower is better) Translates to: WALHSKTLSLKGNEKTEGGVSNL*ASLGHT Trigger: AGTGTGGCCCAGGGAAGCCAAAAGATTGGAGACCCC...TCCCTCTGTCTTTTCATTACCTTTTAAGGACAGTGTCTTTGAATGTAGGGCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000308742.9 |
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| CDS-3UTR CAA 90 bp | CCTAGATCAGGGTGGGCCCTACATTCAAAGACACTGTCCTTAAAAGGTAATGAAGTGACAGTGTGGACTTaGGGCAAATCACCTGACCTG | + |
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Preference number: 5 (lower is better) Translates to: PRSGWALHSKTLSLKGNEVTVWT*GKSPDL Trigger: CAGGTCAGGTGATTTGCCCAAAGTCCACACTGTCAC...TTCATTACCTTTTAAGGACAGTGTCTTTGAATGTAGGGCCCACCCTGATCTAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308742.9 |
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| CDS-3UTR CAA 90 bp | AAATCACCTGACCTGACCGACCTTCAGTTTCTTCAGCAGTCAAAGAGAAATCAACATGTGGCCTGTGGGTaGAACAAGCTTGCACTAAGG | + |
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Preference number: 5 (lower is better) Translates to: KSPDLTDLQFLQQSKRNQHVACG*NKLALR Trigger: CCTTAGTGCAAGCTTGTTCAACCCACAGGCCACATG...TTGATTTCTCTTTGACTGCTGAAGAAACTGAAGGTCGGTCAGGTCAGGTGATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308742.9 |
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| CDS-3UTR CAA 90 bp | CCTAGATCAGGGTGGGCCCTACATTCAAAGACACTGTCCTTAAAAGGTAATGAAATCCTACCCCAGCAGTaGTTCCCTAATCTACAAAGT | + |
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Preference number: 5 (lower is better) Translates to: PRSGWALHSKTLSLKGNEILPQQ*FPNLQS Trigger: ACTTTGTAGATTAGGGAACAACTGCTGGGGTAGGAT...TTCATTACCTTTTAAGGACAGTGTCTTTGAATGTAGGGCCCACCCTGATCTAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308742.9 |
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| CDS-3UTR CAA 90 bp | TGGGCCCTACATTCAAAGACACTGTCCTTAAAAGGTAATGAAAAGACAGAGGGACACGTCATGAATGGTTaGGAAACTGCAGAGAGCAAA | + |
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Preference number: 5 (lower is better) Translates to: WALHSKTLSLKGNEKTEGHVMNG*ETAESK Trigger: TTTGCTCTCTGCAGTTTCCAAACCATTCATGACGTG...TCCCTCTGTCTTTTCATTACCTTTTAAGGACAGTGTCTTTGAATGTAGGGCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308742.9 |
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| CDS-3UTR CAA 90 bp | CCTAGATCAGGGTGGGCCCTACATTCAAAGACACTGTCCTTAAAAGGTAATGAATGCACTCTATGTTCATaGCAGACAAGTCACAATAAC | + |
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Preference number: 5 (lower is better) Translates to: PRSGWALHSKTLSLKGNECTLCS*QTSHNN Trigger: GTTATTGTGACTTGTCTGCAATGAACATAGAGTGCA...TTCATTACCTTTTAAGGACAGTGTCTTTGAATGTAGGGCCCACCCTGATCTAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308742.9 |
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| CDS-3UTR CAA 90 bp | CCTAGATCAGGGTGGGCCCTACATTCAAAGACACTGTCCTTAAAAGGTAATGAATTAATATTTTTCTTGTaGGAAGCTGGCACAGTGGCT | + |
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Preference number: 5 (lower is better) Translates to: PRSGWALHSKTLSLKGNELIFFL*EAGTVA Trigger: AGCCACTGTGCCAGCTTCCAACAAGAAAAATATTAA...TTCATTACCTTTTAAGGACAGTGTCTTTGAATGTAGGGCCCACCCTGATCTAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000308742.9 |
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