RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ALDOC (Homo sapiens)

Ensembl gene IDs: ENSG00000109107

Ensembl transcript IDs: ENST00000226253.9, ENST00000395319.7, ENST00000395321.6, ENST00000435638.5, ENST00000460201.6, ENST00000578590.1, ENST00000581807.5, ENST00000582381.1, ENST00000584086.5

Found 248 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CAGGTGAAGGCATCTCTGCTCTGCATAGCTATTTGGCCCTGGCCATaGCTACAAGCAAAAGTGGGTGCAGATGGCTGGGCCAAGGGCTGT +
Preference number: 1 (lower is better)
Translates to: QVKASLLCIAIWPWP*LQAKVGADGWAKGC
Trigger: ACAGCCCTTGGCCCAGCCATCTGCACCCACTTTTGCTTGTAGTCATGGCCAGGGCCAAATAGCTATGCAGAGCAGAGATGCCTTCACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
3UTR TCA 90 bp TTGTGGGAGCTGGAAGAGGTAGGGGGAGACCCAGCCATCCTGTTCTaGCTTCTAGCAATTTCTTCTGCCCTCAGTCATGAGGGGCTCCCT +
Preference number: 1 (lower is better)
Translates to: LWELEEVGGDPAILF*LLAISSALSHEGLP
Trigger: AGGGAGCCCCTCATGACTGAGGGCAGAAGAAATTGCTAGAAGTCAGAACAGGATGGCTGGGTCTCCCCCTACCTCTTCCAGCTCCCACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
3UTR TCA 90 bp AGCCATCCTGTTCTGACTTCTAGCAATTTCTTCTGCCCTCAGTCATaGGGGGCTCCCTATCCTCCCATCCTATGGTCCCAGGTGCAGCAA +
Preference number: 1 (lower is better)
Translates to: SHPVLTSSNFFCPQS*GAPYPPILWSQVQQ
Trigger: TTGCTGCACCTGGGACCATAGGATGGGAGGATAGGGAGCCCCTCATGACTGAGGGCAGAAGAAATTGCTAGAAGTCAGAACAGGATGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
3UTR TCA 90 bp ATGTTTTGCTACCATTTATTTGCTGTATGGTATGTACTCAAGGCATaGGTCAGGGCTTCTGTACTACCCTCTGATCCCAGGAGACAGGGC +
Preference number: 1 (lower is better)
Translates to: MFCYHLFAVWYVLKA*VRASVLPSDPRRQG
Trigger: GCCCTGTCTCCTGGGATCAGAGGGTAGTACAGAAGCCCTGACTCATGCCTTGAGTACATACCATACAGCAAATAAATGGTAGCAAAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395319.7
ENST00000395321.6
3UTR-3UTR TCA 90 bp TACTCAAGGCATGAGTCAGGGCTTCTGTACTACCCTCTGATCCCAGGAGACAGGTTCTGCCCTCAGTCATaGGGGGCTCCCTATCCTCCC +
Preference number: 2 (lower is better)
Translates to: YSRHESGLLYYPLIPGDRFCPQS*GAPYPP
Trigger: GGGAGGATAGGGAGCCCCTCATGACTGAGGGCAGAA...CCTGTCTCCTGGGATCAGAGGGTAGTACAGAAGCCCTGACTCATGCCTTGAGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
3UTR-3UTR CCA 90 bp CCAGGTGAAGGCATCTCTGCTCTGCATAGCTATTTGGCCCTGGCCATGACTACAGTGGGTGCAGATGGCTaGGCCAAGGGCTGTGGTATG +
Preference number: 2 (lower is better)
Translates to: PGEGISALHSYLALAMTTVGADG*AKGCGM
Trigger: CATACCACAGCCCTTGGCCCAGCCATCTGCACCCAC...TGTAGTCATGGCCAGGGCCAAATAGCTATGCAGAGCAGAGATGCCTTCACCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
3UTR-3UTR TCA 90 bp ATTTCTTCTGCCCTCAGTCATGAGGGGCTCCCTATCCTCCCATCCTATGGTCCCCAAGTTGGTGCCAGGTaGAGGCATCTCTGCTCTGCA +
Preference number: 2 (lower is better)
Translates to: ISSALSHEGLPILPSYGPQVGAR*RHLCSA
Trigger: TGCAGAGCAGAGATGCCTTCACCTGGCACCAACTTG...GGGACCATAGGATGGGAGGATAGGGAGCCCCTCATGACTGAGGGCAGAAGAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
3UTR-3UTR CCA 90 bp GGTGAAGGCATCTCTGCTCTGCATAGCTATTTGGCCCTGGCCATGACTACAAGCAAAAGTGGGTGCAGATaGCTGGGCCAAGGGCTGTGG +
Preference number: 2 (lower is better)
Translates to: GEGISALHSYLALAMTTSKSGCR*LGQGLW
Trigger: CCACAGCCCTTGGCCCAGCCATCTGCACCCACTTTT...GCTTGTAGTCATGGCCAGGGCCAAATAGCTATGCAGAGCAGAGATGCCTTCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
3UTR-3UTR CCA 90 bp CTAGCAATTTCTTCTGCCCTCAGTCATGAGGGGCTCCCTATCCTCCCATCCTATAAAAGTGGGTGCAGATaGCTGGGCCAAGGGCTGTGG +
Preference number: 2 (lower is better)
Translates to: LAISSALSHEGLPILPSYKSGCR*LGQGLW
Trigger: CCACAGCCCTTGGCCCAGCCATCTGCACCCACTTTT...ATAGGATGGGAGGATAGGGAGCCCCTCATGACTGAGGGCAGAAGAAATTGCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
3UTR-3UTR CCA 90 bp ATTTCTTCTGCCCTCAGTCATGAGGGGCTCCCTATCCTCCCATCCTATGGTCCCGACTACAAGCAAAAGTaGGTGCAGATGGCTGGGCCA +
Preference number: 2 (lower is better)
Translates to: ISSALSHEGLPILPSYGPDYKQK*VQMAGP
Trigger: TGGCCCAGCCATCTGCACCCACTTTTGCTTGTAGTC...GGGACCATAGGATGGGAGGATAGGGAGCCCCTCATGACTGAGGGCAGAAGAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
3UTR CAA 90 bp GACAAGTTGGTGCCAGGTGAAGGCATCTCTGCTCTGCATAGCTATTaGGCCCTGGCCATGACTACAAGCAAAAGTGGGTGCAGATGGCTG +
Preference number: 2 (lower is better)
Translates to: DKLVPGEGISALHSY*ALAMTTSKSGCRWL
Trigger: CAGCCATCTGCACCCACTTTTGCTTGTAGTCATGGCCAGGGCCAAATAGCTATGCAGAGCAGAGATGCCTTCACCTGGCACCAACTTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
3UTR-3UTR TCA 90 bp CTAGCAATTTCTTCTGCCCTCAGTCATGAGGGGCTCCCTATCCTCCCATCCTATCAAGTTGGTGCCAGGTaGAGGCATCTCTGCTCTGCA +
Preference number: 2 (lower is better)
Translates to: LAISSALSHEGLPILPSYQVGAR*RHLCSA
Trigger: TGCAGAGCAGAGATGCCTTCACCTGGCACCAACTTG...ATAGGATGGGAGGATAGGGAGCCCCTCATGACTGAGGGCAGAAGAAATTGCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
3UTR-3UTR GCA 90 bp CTAGCAATTTCTTCTGCCCTCAGTCATGAGGGGCTCCCTATCCTCCCATCCTATACAAGCAAAAGTGGGTaGAGATGGCTGGGCCAAGGG +
Preference number: 2 (lower is better)
Translates to: LAISSALSHEGLPILPSYTSKSG*RWLGQG
Trigger: CCCTTGGCCCAGCCATCTGCACCCACTTTTGCTTGT...ATAGGATGGGAGGATAGGGAGCCCCTCATGACTGAGGGCAGAAGAAATTGCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
3UTR-3UTR TCA 90 bp TACTCAAGGCATGAGTCAGGGCTTCTGTACTACCCTCTGATCCCAGGAGACAGGATTTGGCCCTGGCCATaGCTACAAGCAAAAGTGGGT +
Preference number: 2 (lower is better)
Translates to: YSRHESGLLYYPLIPGDRIWPWP*LQAKVG
Trigger: ACCCACTTTTGCTTGTAGTCATGGCCAGGGCCAAAT...CCTGTCTCCTGGGATCAGAGGGTAGTACAGAAGCCCTGACTCATGCCTTGAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
3UTR-3UTR CCA 90 bp TATTTGCTGTATGGTATGTACTCAAGGCATGAGTCAGGGCTTCTGTACTACCCTGTGGGTGCAGATGGCTaGGCCAAGGGCTGTGGTATG +
Preference number: 2 (lower is better)
Translates to: YLLYGMYSRHESGLLYYPVGADG*AKGCGM
Trigger: CATACCACAGCCCTTGGCCCAGCCATCTGCACCCAC...AGGGTAGTACAGAAGCCCTGACTCATGCCTTGAGTACATACCATACAGCAAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
3UTR-3UTR CCA 90 bp TACTCAAGGCATGAGTCAGGGCTTCTGTACTACCCTCTGATCCCAGGAGACAGGGAAAGGAAGACAAGTTaGTGCCAGGTGAAGGCATCT +
Preference number: 2 (lower is better)
Translates to: YSRHESGLLYYPLIPGDRERKTS*CQVKAS
Trigger: AGATGCCTTCACCTGGCACCAACTTGTCTTCCTTTC...CCTGTCTCCTGGGATCAGAGGGTAGTACAGAAGCCCTGACTCATGCCTTGAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
3UTR-3UTR TCA 90 bp TTTATTTGCTGTATGGTATGTACTCAAGGCATGAGTCAGGGCTTCTGTACTACCTTCTGCCCTCAGTCATaGGGGGCTCCCTATCCTCCC +
Preference number: 2 (lower is better)
Translates to: FICCMVCTQGMSQGFCTTFCPQS*GAPYPP
Trigger: GGGAGGATAGGGAGCCCCTCATGACTGAGGGCAGAA...GGTAGTACAGAAGCCCTGACTCATGCCTTGAGTACATACCATACAGCAAATAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
3UTR-3UTR CCA 90 bp TTTATTTGCTGTATGGTATGTACTCAAGGCATGAGTCAGGGCTTCTGTACTACCGTGGGTGCAGATGGCTaGGCCAAGGGCTGTGGTATG +
Preference number: 2 (lower is better)
Translates to: FICCMVCTQGMSQGFCTTVGADG*AKGCGM
Trigger: CATACCACAGCCCTTGGCCCAGCCATCTGCACCCAC...GGTAGTACAGAAGCCCTGACTCATGCCTTGAGTACATACCATACAGCAAATAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
3UTR-3UTR GCA 90 bp ACCATTTATTTGCTGTATGGTATGTACTCAAGGCATGAGTCAGGGCTTCTGTACACAAGCAAAAGTGGGTaGAGATGGCTGGGCCAAGGG +
Preference number: 2 (lower is better)
Translates to: TIYLLYGMYSRHESGLLYTSKSG*RWLGQG
Trigger: CCCTTGGCCCAGCCATCTGCACCCACTTTTGCTTGT...GTACAGAAGCCCTGACTCATGCCTTGAGTACATACCATACAGCAAATAAATGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
3UTR-3UTR GCA 90 bp TTTATTTGCTGTATGGTATGTACTCAAGGCATGAGTCAGGGCTTCTGTACTACCACAAGCAAAAGTGGGTaGAGATGGCTGGGCCAAGGG +
Preference number: 2 (lower is better)
Translates to: FICCMVCTQGMSQGFCTTTSKSG*RWLGQG
Trigger: CCCTTGGCCCAGCCATCTGCACCCACTTTTGCTTGT...GGTAGTACAGAAGCCCTGACTCATGCCTTGAGTACATACCATACAGCAAATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
3UTR-3UTR CCA 90 bp TATGGTATGTACTCAAGGCATGAGTCAGGGCTTCTGTACTACCCTCTGATCCCAGAAGCTACCTCATCATaGGAAAATTGTGGGAGCTGG +
Preference number: 2 (lower is better)
Translates to: YGMYSRHESGLLYYPLIPEATSS*ENCGSW
Trigger: CCAGCTCCCACAATTTTCCCATGATGAGGTAGCTTC...TGGGATCAGAGGGTAGTACAGAAGCCCTGACTCATGCCTTGAGTACATACCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
3UTR-3UTR TCA 90 bp TTTATTTGCTGTATGGTATGTACTCAAGGCATGAGTCAGGGCTTCTGTACTACCATTTGGCCCTGGCCATaGCTACAAGCAAAAGTGGGT +
Preference number: 2 (lower is better)
Translates to: FICCMVCTQGMSQGFCTTIWPWP*LQAKVG
Trigger: ACCCACTTTTGCTTGTAGTCATGGCCAGGGCCAAAT...GGTAGTACAGAAGCCCTGACTCATGCCTTGAGTACATACCATACAGCAAATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
3UTR-3UTR TCA 90 bp CTACCATTTATTTGCTGTATGGTATGTACTCAAGGCATGAGTCAGGGCTTCTGTATTTGGCCCTGGCCATaGCTACAAGCAAAAGTGGGT +
Preference number: 2 (lower is better)
Translates to: LPFICCMVCTQGMSQGFCIWPWP*LQAKVG
Trigger: ACCCACTTTTGCTTGTAGTCATGGCCAGGGCCAAAT...ACAGAAGCCCTGACTCATGCCTTGAGTACATACCATACAGCAAATAAATGGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
3UTR-3UTR GCA 90 bp TTTATTTGCTGTATGGTATGTACTCAAGGCATGAGTCAGGGCTTCTGTACTACCAAGGCATCTCTGCTCTaGATAGCTATTTGGCCCTGG +
Preference number: 2 (lower is better)
Translates to: FICCMVCTQGMSQGFCTTKASLL*IAIWPW
Trigger: CCAGGGCCAAATAGCTATGCAGAGCAGAGATGCCTT...GGTAGTACAGAAGCCCTGACTCATGCCTTGAGTACATACCATACAGCAAATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
3UTR-3UTR GCA 90 bp TTTATTTGCTGTATGGTATGTACTCAAGGCATGAGTCAGGGCTTCTGTACTACCAGGAAGACAAGTTGGTaGCAGGTGAAGGCATCTCTG +
Preference number: 2 (lower is better)
Translates to: FICCMVCTQGMSQGFCTTRKTSW*QVKASL
Trigger: CAGAGATGCCTTCACCTGGCACCAACTTGTCTTCCT...GGTAGTACAGAAGCCCTGACTCATGCCTTGAGTACATACCATACAGCAAATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
3UTR-3UTR CCA 90 bp TTGCTACCATTTATTTGCTGTATGGTATGTACTCAAGGCATGAGTCAGGGCTTCGAAAGGAAGACAAGTTaGTGCCAGGTGAAGGCATCT +
Preference number: 2 (lower is better)
Translates to: LLPFICCMVCTQGMSQGFERKTS*CQVKAS
Trigger: AGATGCCTTCACCTGGCACCAACTTGTCTTCCTTTC...GAAGCCCTGACTCATGCCTTGAGTACATACCATACAGCAAATAAATGGTAGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
3UTR-3UTR CAA 90 bp GCCCTCAGTCATGAGGGGCTCCCTATCCTCCCATCCTATGGTCCCAGGTGCAGCAGAAAGGAAGACAAGTaGGTGCCAGGTGAAGGCATC +
Preference number: 3 (lower is better)
Translates to: ALSHEGLPILPSYGPRCSRKEDK*VPGEGI
Trigger: GATGCCTTCACCTGGCACCAACTTGTCTTCCTTTCT...GCTGCACCTGGGACCATAGGATGGGAGGATAGGGAGCCCCTCATGACTGAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
3UTR TCA 72 bp GCATCTCTGCTCTGCATAGCTATTTGGCCCTGGCCATaGCTACAAGCAAAAGTGGGTGCAGATGGCTGGGCC +
Preference number: 3 (lower is better)
Translates to: ASLLCIAIWPWP*LQAKVGADGWA
Trigger: GGCCCAGCCATCTGCACCCACTTTTGCTTGTAGTCATGGCCAGGGCCAAATAGCTATGCAGAGCAGAGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
3UTR GCA 72 bp TATTTGGCCCTGGCCATGACTACAAGCAAAAGTGGGTaGAGATGGCTGGGCCAAGGGCTGTGGTATGGAGTG +
Preference number: 3 (lower is better)
Translates to: YLALAMTTSKSG*RWLGQGLWYGV
Trigger: CACTCCATACCACAGCCCTTGGCCCAGCCATCTGCACCCACTTTTGCTTGTAGTCATGGCCAGGGCCAAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
3UTR-3UTR CAA 90 bp TACTCAAGGCATGAGTCAGGGCTTCTGTACTACCCTCTGATCCCAGGAGACAGGGCTCTGCATAGCTATTaGGCCCTGGCCATGACTACA +
Preference number: 3 (lower is better)
Translates to: YSRHESGLLYYPLIPGDRALHSY*ALAMTT
Trigger: TGTAGTCATGGCCAGGGCCAAATAGCTATGCAGAGC...CCTGTCTCCTGGGATCAGAGGGTAGTACAGAAGCCCTGACTCATGCCTTGAGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
3UTR-3UTR CAA 90 bp ATTTCTTCTGCCCTCAGTCATGAGGGGCTCCCTATCCTCCCATCCTATGGTCCCAGAAAGGAAGACAAGTaGGTGCCAGGTGAAGGCATC +
Preference number: 3 (lower is better)
Translates to: ISSALSHEGLPILPSYGPRKEDK*VPGEGI
Trigger: GATGCCTTCACCTGGCACCAACTTGTCTTCCTTTCT...GGGACCATAGGATGGGAGGATAGGGAGCCCCTCATGACTGAGGGCAGAAGAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
3UTR TCA 72 bp GTTCTGACTTCTAGCAATTTCTTCTGCCCTCAGTCATaGGGGGCTCCCTATCCTCCCATCCTATGGTCCCAG +
Preference number: 3 (lower is better)
Translates to: VLTSSNFFCPQS*GAPYPPILWSQ
Trigger: CTGGGACCATAGGATGGGAGGATAGGGAGCCCCTCATGACTGAGGGCAGAAGAAATTGCTAGAAGTCAGAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
3UTR-3UTR CAA 90 bp TATTTGCTGTATGGTATGTACTCAAGGCATGAGTCAGGGCTTCTGTACTACCCTGCTCTGCATAGCTATTaGGCCCTGGCCATGACTACA +
Preference number: 3 (lower is better)
Translates to: YLLYGMYSRHESGLLYYPALHSY*ALAMTT
Trigger: TGTAGTCATGGCCAGGGCCAAATAGCTATGCAGAGC...AGGGTAGTACAGAAGCCCTGACTCATGCCTTGAGTACATACCATACAGCAAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
3UTR TCA 72 bp TACCATTTATTTGCTGTATGGTATGTACTCAAGGCATaGGTCAGGGCTTCTGTACTACCCTCTGATCCCAGG +
Preference number: 3 (lower is better)
Translates to: YHLFAVWYVLKA*VRASVLPSDPR
Trigger: CCTGGGATCAGAGGGTAGTACAGAAGCCCTGACTCATGCCTTGAGTACATACCATACAGCAAATAAATGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CCA 90 bp GCCCTCAGTCATGAGGGGCTCCCTATCCTCCCATCCTATGGTCCCAGGTGCAGCCACTCCTGGGACAGCTaGGGGCACAGTGCGACGCAG +
Preference number: 4 (lower is better)
Translates to: ALSHEGLPILPSYGPRCSHSWDS*GHSATQ
Trigger: CTGCGTCGCACTGTGCCCCCAGCTGTCCCAGGAGTG...GCTGCACCTGGGACCATAGGATGGGAGGATAGGGAGCCCCTCATGACTGAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR TCA 90 bp GCCCTCAGTCATGAGGGGCTCCCTATCCTCCCATCCTATGGTCCCAGGTGCAGCCCTCTGGGGTATACTTaGTGGGACAGGCATGGCCCG +
Preference number: 4 (lower is better)
Translates to: ALSHEGLPILPSYGPRCSPLGYT*WDRHGP
Trigger: CGGGCCATGCCTGTCCCATCAAGTATACCCCAGAGG...GCTGCACCTGGGACCATAGGATGGGAGGATAGGGAGCCCCTCATGACTGAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR GCA 90 bp GCCCTCAGTCATGAGGGGCTCCCTATCCTCCCATCCTATGGTCCCAGGTGCAGCTCGCCAGGCATTGAGTaGAGAGGCTTGCAGGGCACG +
Preference number: 4 (lower is better)
Translates to: ALSHEGLPILPSYGPRCSSPGIE*RGLQGT
Trigger: CGTGCCCTGCAAGCCTCTGCACTCAATGCCTGGCGA...GCTGCACCTGGGACCATAGGATGGGAGGATAGGGAGCCCCTCATGACTGAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CCA 90 bp TTGGCCCTGGCCATGACTACAAGCAAAAGTGGGTGCAGATGGCTGGGCCAAGGGCACTCCTGGGACAGCTaGGGGCACAGTGCGACGCAG +
Preference number: 4 (lower is better)
Translates to: LALAMTTSKSGCRWLGQGHSWDS*GHSATQ
Trigger: CTGCGTCGCACTGTGCCCCCAGCTGTCCCAGGAGTG...CCCTTGGCCCAGCCATCTGCACCCACTTTTGCTTGTAGTCATGGCCAGGGCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR TCA 90 bp GCCCTCAGTCATGAGGGGCTCCCTATCCTCCCATCCTATGGTCCCAGGTGCAGCCACCCTTGTCAACCTTaGTGCCCACGACGATGCCCT +
Preference number: 4 (lower is better)
Translates to: ALSHEGLPILPSYGPRCSHPCQP*CPRRCP
Trigger: AGGGCATCGTCGTGGGCATCAAGGTTGACAAGGGTG...GCTGCACCTGGGACCATAGGATGGGAGGATAGGGAGCCCCTCATGACTGAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR TCA 90 bp TTTGGCCCTGGCCATGACTACAAGCAAAAGTGGGTGCAGATGGCTGGGCCAAGGGCCCTCGCCAGGCATTaGGTGCAGAGGCTTGCAGGG +
Preference number: 4 (lower is better)
Translates to: FGPGHDYKQKWVQMAGPRALARH*VQRLAG
Trigger: CCCTGCAAGCCTCTGCACTCAATGCCTGGCGAGGGC...CCTTGGCCCAGCCATCTGCACCCACTTTTGCTTGTAGTCATGGCCAGGGCCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR TCA 90 bp GCCCTCAGTCATGAGGGGCTCCCTATCCTCCCATCCTATGGTCCCAGGTGCAGCGCTCCCTCTGGTAAATaGGGCTGCGGATGTCGCAGA +
Preference number: 4 (lower is better)
Translates to: ALSHEGLPILPSYGPRCSAPSGK*GCGCRR
Trigger: TCTGCGACATCCGCAGCCTCATTTACCAGAGGGAGC...GCTGCACCTGGGACCATAGGATGGGAGGATAGGGAGCCCCTCATGACTGAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395321.6
CDS-3UTR GCA 90 bp GCCCTCAGTCATGAGGGGCTCCCTATCCTCCCATCCTATGGTCCCAGGTGCAGCTCAGCCGCTTGGCCATaGTGCCTACAGACTCATCCG +
Preference number: 4 (lower is better)
Translates to: ALSHEGLPILPSYGPRCSSAAWP*CLQTHP
Trigger: CGGATGAGTCTGTAGGCAGCATGGCCAAGCGGCTGA...GCTGCACCTGGGACCATAGGATGGGAGGATAGGGAGCCCCTCATGACTGAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR TCA 90 bp TTGGCCCTGGCCATGACTACAAGCAAAAGTGGGTGCAGATGGCTGGGCCAAGGGAGGGCTGGGTACGAGTaGGGCATGGTGACAGCTCCT +
Preference number: 4 (lower is better)
Translates to: LALAMTTSKSGCRWLGQGRAGYE*GMVTAP
Trigger: AGGAGCTGTCACCATGCCTCACTCGTACCCAGCCCT...CCCTTGGCCCAGCCATCTGCACCCACTTTTGCTTGTAGTCATGGCCAGGGCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395321.6
CDS-3UTR CCA 90 bp TTTGGCCCTGGCCATGACTACAAGCAAAAGTGGGTGCAGATGGCTGGGCCAAGGGCACTGAACAGGACCTaGCGGTACAGCCGGCGGTTC +
Preference number: 4 (lower is better)
Translates to: FGPGHDYKQKWVQMAGPRALNRT*RYSRRF
Trigger: GAACCGCCGGCTGTACCGCCAGGTCCTGTTCAGTGC...CCTTGGCCCAGCCATCTGCACCCACTTTTGCTTGTAGTCATGGCCAGGGCCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CCA 90 bp GCCCTCAGTCATGAGGGGCTCCCTATCCTCCCATCCTATGGTCCCAGGTGCAGCGCACACAGCGCCACTTaGCAAAGTCAGCACCATCCT +
Preference number: 4 (lower is better)
Translates to: ALSHEGLPILPSYGPRCSAHSAT*QSQHHP
Trigger: AGGATGGTGCTGACTTTGCCAAGTGGCGCTGTGTGC...GCTGCACCTGGGACCATAGGATGGGAGGATAGGGAGCCCCTCATGACTGAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CCA 90 bp TTGGCCCTGGCCATGACTACAAGCAAAAGTGGGTGCAGATGGCTGGGCCAAGGGCAGGAAGGTCACTCCTaGGACAGCTGGGGGCACAGT +
Preference number: 4 (lower is better)
Translates to: LALAMTTSKSGCRWLGQGQEGHS*DSWGHS
Trigger: ACTGTGCCCCCAGCTGTCCCAGGAGTGACCTTCCTG...CCCTTGGCCCAGCCATCTGCACCCACTTTTGCTTGTAGTCATGGCCAGGGCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR TCA 90 bp TACTCAAGGCATGAGTCAGGGCTTCTGTACTACCCTCTGATCCCAGGAGACAGGGCCCTCGCCAGGCATTaGGTGCAGAGGCTTGCAGGG +
Preference number: 4 (lower is better)
Translates to: YSRHESGLLYYPLIPGDRALARH*VQRLAG
Trigger: CCCTGCAAGCCTCTGCACTCAATGCCTGGCGAGGGC...CCTGTCTCCTGGGATCAGAGGGTAGTACAGAAGCCCTGACTCATGCCTTGAGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR GCA 90 bp TTGGCCCTGGCCATGACTACAAGCAAAAGTGGGTGCAGATGGCTGGGCCAAGGGCAGCCAGAATGCCTTTaGCCGGGGCTACAATCCGCA +
Preference number: 4 (lower is better)
Translates to: LALAMTTSKSGCRWLGQGQPECL*PGLQSA
Trigger: TGCGGATTGTAGCCCCGGGCAAAGGCATTCTGGCTG...CCCTTGGCCCAGCCATCTGCACCCACTTTTGCTTGTAGTCATGGCCAGGGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CCA 90 bp TTTGGCCCTGGCCATGACTACAAGCAAAAGTGGGTGCAGATGGCTGGGCCAAGGGTGGGTGCAGATGGCTaGGCCAAGGGCTGTGGTATG +
Preference number: 4 (lower is better)
Translates to: FGPGHDYKQKWVQMAGPRVGADG*AKGCGM
Trigger: CATACCACAGCCCTTGGCCCAGCCATCTGCACCCAC...CCTTGGCCCAGCCATCTGCACCCACTTTTGCTTGTAGTCATGGCCAGGGCCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR TCA 90 bp CTTCTAGCAATTTCTTCTGCCCTCAGTCATGAGGGGCTCCCTATCCTCCCATCCAGGGCTGGGTACGAGTaGGGCATGGTGACAGCTCCC +
Preference number: 4 (lower is better)
Translates to: LLAISSALSHEGLPILPSRAGYE*GMVTAP
Trigger: GGGAGCTGTCACCATGCCTCACTCGTACCCAGCCCT...GGATGGGAGGATAGGGAGCCCCTCATGACTGAGGGCAGAAGAAATTGCTAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226253.9
ENST00000395319.7
CDS-3UTR TCA 90 bp ATTTCTTCTGCCCTCAGTCATGAGGGGCTCCCTATCCTCCCATCCTATGGTCCCCCTCTGGGGTATACTTaGTGGGACAGGCATGGCCCG +
Preference number: 4 (lower is better)
Translates to: ISSALSHEGLPILPSYGPPLGYT*WDRHGP
Trigger: CGGGCCATGCCTGTCCCATCAAGTATACCCCAGAGG...GGGACCATAGGATGGGAGGATAGGGAGCCCCTCATGACTGAGGGCAGAAGAAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR TCA 90 bp TTGGCCCTGGCCATGACTACAAGCAAAAGTGGGTGCAGATGGCTGGGCCAAGGGACGAGTGAGGCATGGTaGCAGCTCCTTCCAAGGCTT +
Preference number: 4 (lower is better)
Translates to: LALAMTTSKSGCRWLGQGTSEAW*QLLPRL
Trigger: AAGCCTTGGAAGGAGCTGTCACCATGCCTCACTCGT...CCCTTGGCCCAGCCATCTGCACCCACTTTTGCTTGTAGTCATGGCCAGGGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395321.6
CDS-3UTR GCA 90 bp TTGGCCCTGGCCATGACTACAAGCAAAAGTGGGTGCAGATGGCTGGGCCAAGGGCAGGGCAGTGACAGTTaGCATGGCAATCTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: LALAMTTSKSGCRWLGQGQGSDS*HGNLLW
Trigger: CCAGAGGAGATTGCCATGGCAACTGTCACTGCCCTG...CCCTTGGCCCAGCCATCTGCACCCACTTTTGCTTGTAGTCATGGCCAGGGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR GCA 90 bp GCCCTCAGTCATGAGGGGCTCCCTATCCTCCCATCCTATGGTCCCAGGTGCAGCAGGAAGACAAGTTGGTaGCAGGTGAAGGCATCTCTG +
Preference number: 4 (lower is better)
Translates to: ALSHEGLPILPSYGPRCSRKTSW*QVKASL
Trigger: CAGAGATGCCTTCACCTGGCACCAACTTGTCTTCCT...GCTGCACCTGGGACCATAGGATGGGAGGATAGGGAGCCCCTCATGACTGAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR TCA 90 bp ATTTCTTCTGCCCTCAGTCATGAGGGGCTCCCTATCCTCCCATCCTATGGTCCCTGCGACGCAGGGCAGTaGCAGTTGCCATGGCAATCT +
Preference number: 4 (lower is better)
Translates to: ISSALSHEGLPILPSYGPCDAGQ*QLPWQS
Trigger: AGATTGCCATGGCAACTGTCACTGCCCTGCGTCGCA...GGGACCATAGGATGGGAGGATAGGGAGCCCCTCATGACTGAGGGCAGAAGAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR TCA 90 bp GGTGAAGGCATCTCTGCTCTGCATAGCTATTTGGCCCTGGCCATGACTACAAGCTTCTGCCCTCAGTCATaGGGGGCTCCCTATCCTCCC +
Preference number: 4 (lower is better)
Translates to: GEGISALHSYLALAMTTSFCPQS*GAPYPP
Trigger: GGGAGGATAGGGAGCCCCTCATGACTGAGGGCAGAA...GCTTGTAGTCATGGCCAGGGCCAAATAGCTATGCAGAGCAGAGATGCCTTCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR TCA 90 bp TTTGGCCCTGGCCATGACTACAAGCAAAAGTGGGTGCAGATGGCTGGGCCAAGGTTCTGTACTACCCTCTaGTCCCAGGAGACAGGGCAG +
Preference number: 4 (lower is better)
Translates to: FGPGHDYKQKWVQMAGPRFCTTL*SQETGQ
Trigger: CTGCCCTGTCTCCTGGGATCAGAGGGTAGTACAGAA...CCTTGGCCCAGCCATCTGCACCCACTTTTGCTTGTAGTCATGGCCAGGGCCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR GCA 90 bp ATTTCTTCTGCCCTCAGTCATGAGGGGCTCCCTATCCTCCCATCCTATGGTCCCCAGCCAGAATGCCTTTaGCCGGGGCTACAATCCGCA +
Preference number: 4 (lower is better)
Translates to: ISSALSHEGLPILPSYGPQPECL*PGLQSA
Trigger: TGCGGATTGTAGCCCCGGGCAAAGGCATTCTGGCTG...GGGACCATAGGATGGGAGGATAGGGAGCCCCTCATGACTGAGGGCAGAAGAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR GCA 90 bp TTGGCCCTGGCCATGACTACAAGCAAAAGTGGGTGCAGATGGCTGGGCCAAGGGCTCCAGAATGGCAAGTaGAGAGGGTGTACGCTCACT +
Preference number: 4 (lower is better)
Translates to: LALAMTTSKSGCRWLGQGLQNGK*RGCTLT
Trigger: AGTGAGCGTACACCCTCTGCACTTGCCATTCTGGAG...CCCTTGGCCCAGCCATCTGCACCCACTTTTGCTTGTAGTCATGGCCAGGGCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CCA 90 bp TTTGGCCCTGGCCATGACTACAAGCAAAAGTGGGTGCAGATGGCTGGGCCAAGGCTCAGCAGAAAGGGCTaGGTACGAGTGAGGCATGGT +
Preference number: 4 (lower is better)
Translates to: FGPGHDYKQKWVQMAGPRLSRKG*VRVRHG
Trigger: ACCATGCCTCACTCGTACCCAGCCCTTTCTGCTGAG...CCTTGGCCCAGCCATCTGCACCCACTTTTGCTTGTAGTCATGGCCAGGGCCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CCA 90 bp TTGGCCCTGGCCATGACTACAAGCAAAAGTGGGTGCAGATGGCTGGGCCAAGGGTTTTCCACCCCAATTTaGCTCAGCCGCTTGGCCATG +
Preference number: 4 (lower is better)
Translates to: LALAMTTSKSGCRWLGQGFSTPI*LSRLAM
Trigger: CATGGCCAAGCGGCTGAGCCAAATTGGGGTGGAAAA...CCCTTGGCCCAGCCATCTGCACCCACTTTTGCTTGTAGTCATGGCCAGGGCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CCA 90 bp TTTGGCCCTGGCCATGACTACAAGCAAAAGTGGGTGCAGATGGCTGGGCCAAGGCTGGGCCAAGGGCTGTaGTATGGAGTGGATACTCAG +
Preference number: 4 (lower is better)
Translates to: FGPGHDYKQKWVQMAGPRLGQGL*YGVDTQ
Trigger: CTGAGTATCCACTCCATACCACAGCCCTTGGCCCAG...CCTTGGCCCAGCCATCTGCACCCACTTTTGCTTGTAGTCATGGCCAGGGCCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CCA 90 bp ATTTCTTCTGCCCTCAGTCATGAGGGGCTCCCTATCCTCCCATCCTATGGTCCCAAAAGTGGGTGCAGATaGCTGGGCCAAGGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: ISSALSHEGLPILPSYGPKSGCR*LGQGLW
Trigger: CCACAGCCCTTGGCCCAGCCATCTGCACCCACTTTT...GGGACCATAGGATGGGAGGATAGGGAGCCCCTCATGACTGAGGGCAGAAGAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR TCA 90 bp CCAGGTGAAGGCATCTCTGCTCTGCATAGCTATTTGGCCCTGGCCATGACTACATGCGACGCAGGGCAGTaGCAGTTGCCATGGCAATCT +
Preference number: 4 (lower is better)
Translates to: PGEGISALHSYLALAMTTCDAGQ*QLPWQS
Trigger: AGATTGCCATGGCAACTGTCACTGCCCTGCGTCGCA...TGTAGTCATGGCCAGGGCCAAATAGCTATGCAGAGCAGAGATGCCTTCACCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR TCA 90 bp ATTTCTTCTGCCCTCAGTCATGAGGGGCTCCCTATCCTCCCATCCTATGGTCCCTTCTGTACTACCCTCTaGTCCCAGGAGACAGGGCAG +
Preference number: 4 (lower is better)
Translates to: ISSALSHEGLPILPSYGPFCTTL*SQETGQ
Trigger: CTGCCCTGTCTCCTGGGATCAGAGGGTAGTACAGAA...GGGACCATAGGATGGGAGGATAGGGAGCCCCTCATGACTGAGGGCAGAAGAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR GCA 90 bp CCAGGTGAAGGCATCTCTGCTCTGCATAGCTATTTGGCCCTGGCCATGACTACACATCCGCAGCCAGAATaGCTTTGCCCGGGGCTACAA +
Preference number: 4 (lower is better)
Translates to: PGEGISALHSYLALAMTTHPQPE*LCPGLQ
Trigger: TTGTAGCCCCGGGCAAAGGCATTCTGGCTGCGGATG...TGTAGTCATGGCCAGGGCCAAATAGCTATGCAGAGCAGAGATGCCTTCACCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR GCA 90 bp GGTGAAGGCATCTCTGCTCTGCATAGCTATTTGGCCCTGGCCATGACTACAAGCCCAGCATTGTCCCGTTaGCCTCGCCAGGCATTGAGT +
Preference number: 4 (lower is better)
Translates to: GEGISALHSYLALAMTTSPALSR*PRQALS
Trigger: ACTCAATGCCTGGCGAGGGCAACGGGACAATGCTGG...GCTTGTAGTCATGGCCAGGGCCAAATAGCTATGCAGAGCAGAGATGCCTTCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CCA 90 bp GCCCTCAGTCATGAGGGGCTCCCTATCCTCCCATCCTATGGTCCCAGGTGCAGCCAACGTTTGAGGTCGTaGTCTCCATCAGGCAATATT +
Preference number: 4 (lower is better)
Translates to: ALSHEGLPILPSYGPRCSQRLRS*SPSGNI
Trigger: AATATTGCCTGATGGAGACCACGACCTCAAACGTTG...GCTGCACCTGGGACCATAGGATGGGAGGATAGGGAGCCCCTCATGACTGAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226253.9
ENST00000395321.6
CDS-3UTR CCA 90 bp TACTCAAGGCATGAGTCAGGGCTTCTGTACTACCCTCTGATCCCAGGAGACAGGTTGATGGGACAGGCATaGCCCGGGGTCACCATGTTG +
Preference number: 4 (lower is better)
Translates to: YSRHESGLLYYPLIPGDRLMGQA*PGVTML
Trigger: CAACATGGTGACCCCGGGCCATGCCTGTCCCATCAA...CCTGTCTCCTGGGATCAGAGGGTAGTACAGAAGCCCTGACTCATGCCTTGAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CCA 90 bp GGTGAAGGCATCTCTGCTCTGCATAGCTATTTGGCCCTGGCCATGACTACAAGCTTGATGGGACAGGCATaGCCCGGGGTCACCATGTTG +
Preference number: 4 (lower is better)
Translates to: GEGISALHSYLALAMTTSLMGQA*PGVTML
Trigger: CAACATGGTGACCCCGGGCCATGCCTGTCCCATCAA...GCTTGTAGTCATGGCCAGGGCCAAATAGCTATGCAGAGCAGAGATGCCTTCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CCA 90 bp CTAGCAATTTCTTCTGCCCTCAGTCATGAGGGGCTCCCTATCCTCCCATCCTATCAGGAAGGTCACTCCTaGGACAGCTGGGGGCACAGT +
Preference number: 4 (lower is better)
Translates to: LAISSALSHEGLPILPSYQEGHS*DSWGHS
Trigger: ACTGTGCCCCCAGCTGTCCCAGGAGTGACCTTCCTG...ATAGGATGGGAGGATAGGGAGCCCCTCATGACTGAGGGCAGAAGAAATTGCTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CCA 90 bp ATTTCTTCTGCCCTCAGTCATGAGGGGCTCCCTATCCTCCCATCCTATGGTCCCCCTTCATACTTGCCCTaGGCTGCAAGCCCATTCACC +
Preference number: 4 (lower is better)
Translates to: ISSALSHEGLPILPSYGPPSYLP*AASPFT
Trigger: GGTGAATGGGCTTGCAGCCCAGGGCAAGTATGAAGG...GGGACCATAGGATGGGAGGATAGGGAGCCCCTCATGACTGAGGGCAGAAGAAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR TCA 90 bp GGTGAAGGCATCTCTGCTCTGCATAGCTATTTGGCCCTGGCCATGACTACAAGCAGGGTGTACGCTCACTaGTTTTCAGCACACAGCGCC +
Preference number: 4 (lower is better)
Translates to: GEGISALHSYLALAMTTSRVYAH*FSAHSA
Trigger: GGCGCTGTGTGCTGAAAATCAGTGAGCGTACACCCT...GCTTGTAGTCATGGCCAGGGCCAAATAGCTATGCAGAGCAGAGATGCCTTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR TCA 90 bp CTTCTAGCAATTTCTTCTGCCCTCAGTCATGAGGGGCTCCCTATCCTCCCATCCTTCTGTACTACCCTCTaGTCCCAGGAGACAGGGCAG +
Preference number: 4 (lower is better)
Translates to: LLAISSALSHEGLPILPSFCTTL*SQETGQ
Trigger: CTGCCCTGTCTCCTGGGATCAGAGGGTAGTACAGAA...GGATGGGAGGATAGGGAGCCCCTCATGACTGAGGGCAGAAGAAATTGCTAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR TCA 90 bp GCCCTCAGTCATGAGGGGCTCCCTATCCTCCCATCCTATGGTCCCAGGTGCAGCTCCAAGGCTTCAGAATaGGGCAAAAGTACTTATTGC +
Preference number: 4 (lower is better)
Translates to: ALSHEGLPILPSYGPRCSSKASE*GKSTYC
Trigger: GCAATAAGTACTTTTGCCTCATTCTGAAGCCTTGGA...GCTGCACCTGGGACCATAGGATGGGAGGATAGGGAGCCCCTCATGACTGAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395321.6
CDS-3UTR GCA 90 bp CTAGCAATTTCTTCTGCCCTCAGTCATGAGGGGCTCCCTATCCTCCCATCCTATTCAGCCGCTTGGCCATaGTGCCTACAGACTCATCCG +
Preference number: 4 (lower is better)
Translates to: LAISSALSHEGLPILPSYSAAWP*CLQTHP
Trigger: CGGATGAGTCTGTAGGCAGCATGGCCAAGCGGCTGA...ATAGGATGGGAGGATAGGGAGCCCCTCATGACTGAGGGCAGAAGAAATTGCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR GCA 90 bp CTTCTAGCAATTTCTTCTGCCCTCAGTCATGAGGGGCTCCCTATCCTCCCATCCCAGGGCAGTGACAGTTaGCATGGCAATCTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: LLAISSALSHEGLPILPSQGSDS*HGNLLW
Trigger: CCAGAGGAGATTGCCATGGCAACTGTCACTGCCCTG...GGATGGGAGGATAGGGAGCCCCTCATGACTGAGGGCAGAAGAAATTGCTAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR GCA 90 bp CTAGCAATTTCTTCTGCCCTCAGTCATGAGGGGCTCCCTATCCTCCCATCCTATCCAGCATTGTCCCGTTaGCCTCGCCAGGCATTGAGT +
Preference number: 4 (lower is better)
Translates to: LAISSALSHEGLPILPSYPALSR*PRQALS
Trigger: ACTCAATGCCTGGCGAGGGCAACGGGACAATGCTGG...ATAGGATGGGAGGATAGGGAGCCCCTCATGACTGAGGGCAGAAGAAATTGCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR GCA 90 bp TACTCAAGGCATGAGTCAGGGCTTCTGTACTACCCTCTGATCCCAGGAGACAGGACAAGCAAAAGTGGGTaGAGATGGCTGGGCCAAGGG +
Preference number: 4 (lower is better)
Translates to: YSRHESGLLYYPLIPGDRTSKSG*RWLGQG
Trigger: CCCTTGGCCCAGCCATCTGCACCCACTTTTGCTTGT...CCTGTCTCCTGGGATCAGAGGGTAGTACAGAAGCCCTGACTCATGCCTTGAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR GCA 90 bp GGTGAAGGCATCTCTGCTCTGCATAGCTATTTGGCCCTGGCCATGACTACAAGCACAAGCAAAAGTGGGTaGAGATGGCTGGGCCAAGGG +
Preference number: 4 (lower is better)
Translates to: GEGISALHSYLALAMTTSTSKSG*RWLGQG
Trigger: CCCTTGGCCCAGCCATCTGCACCCACTTTTGCTTGT...GCTTGTAGTCATGGCCAGGGCCAAATAGCTATGCAGAGCAGAGATGCCTTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR GCA 90 bp TTTGGCCCTGGCCATGACTACAAGCAAAAGTGGGTGCAGATGGCTGGGCCAAGGAAGGCATCTCTGCTCTaGATAGCTATTTGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: FGPGHDYKQKWVQMAGPRKASLL*IAIWPW
Trigger: CCAGGGCCAAATAGCTATGCAGAGCAGAGATGCCTT...CCTTGGCCCAGCCATCTGCACCCACTTTTGCTTGTAGTCATGGCCAGGGCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CCA 90 bp TATGGTATGTACTCAAGGCATGAGTCAGGGCTTCTGTACTACCCTCTGATCCCAGCACTGAACAGGACCTaGCGGTACAGCCGGCGGTTC +
Preference number: 4 (lower is better)
Translates to: YGMYSRHESGLLYYPLIPALNRT*RYSRRF
Trigger: GAACCGCCGGCTGTACCGCCAGGTCCTGTTCAGTGC...TGGGATCAGAGGGTAGTACAGAAGCCCTGACTCATGCCTTGAGTACATACCATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CCA 90 bp TACTCAAGGCATGAGTCAGGGCTTCTGTACTACCCTCTGATCCCAGGAGACAGGCCAGCCCTTGAGTGGTaGTTTCTCCATCAGTCCCAG +
Preference number: 4 (lower is better)
Translates to: YSRHESGLLYYPLIPGDRPALEW*FLHQSQ
Trigger: CTGGGACTGATGGAGAAACCACCACTCAAGGGCTGG...CCTGTCTCCTGGGATCAGAGGGTAGTACAGAAGCCCTGACTCATGCCTTGAGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CCA 90 bp GGTGAAGGCATCTCTGCTCTGCATAGCTATTTGGCCCTGGCCATGACTACAAGCCCAGCCCTTGAGTGGTaGTTTCTCCATCAGTCCCAG +
Preference number: 4 (lower is better)
Translates to: GEGISALHSYLALAMTTSPALEW*FLHQSQ
Trigger: CTGGGACTGATGGAGAAACCACCACTCAAGGGCTGG...GCTTGTAGTCATGGCCAGGGCCAAATAGCTATGCAGAGCAGAGATGCCTTCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CCA 90 bp TTGGCCCTGGCCATGACTACAAGCAAAAGTGGGTGCAGATGGCTGGGCCAAGGGCATGGCAATCTCCTCTaGGGTATACTTGATGGGACA +
Preference number: 4 (lower is better)
Translates to: LALAMTTSKSGCRWLGQGHGNLL*GILDGT
Trigger: TGTCCCATCAAGTATACCCCAGAGGAGATTGCCATG...CCCTTGGCCCAGCCATCTGCACCCACTTTTGCTTGTAGTCATGGCCAGGGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CCA 90 bp TACTCAAGGCATGAGTCAGGGCTTCTGTACTACCCTCTGATCCCAGGAGACAGGCCTTCATACTTGCCCTaGGCTGCAAGCCCATTCACC +
Preference number: 4 (lower is better)
Translates to: YSRHESGLLYYPLIPGDRPSYLP*AASPFT
Trigger: GGTGAATGGGCTTGCAGCCCAGGGCAAGTATGAAGG...CCTGTCTCCTGGGATCAGAGGGTAGTACAGAAGCCCTGACTCATGCCTTGAGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CCA 90 bp TTGGCCCTGGCCATGACTACAAGCAAAAGTGGGTGCAGATGGCTGGGCCAAGGGCTCAGTAGGCATGGTTaGCAATGTAGAGTGACTGTG +
Preference number: 4 (lower is better)
Translates to: LALAMTTSKSGCRWLGQGLSRHG*QCRVTV
Trigger: CACAGTCACTCTACATTGCCAACCATGCCTACTGAG...CCCTTGGCCCAGCCATCTGCACCCACTTTTGCTTGTAGTCATGGCCAGGGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CCA 90 bp TTTGGCCCTGGCCATGACTACAAGCAAAAGTGGGTGCAGATGGCTGGGCCAAGGGGCTGTGGTATGGAGTaGATACTCAGTAGGCATGGT +
Preference number: 4 (lower is better)
Translates to: FGPGHDYKQKWVQMAGPRGCGME*ILSRHG
Trigger: ACCATGCCTACTGAGTATCCACTCCATACCACAGCC...CCTTGGCCCAGCCATCTGCACCCACTTTTGCTTGTAGTCATGGCCAGGGCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CCA 90 bp ATTTCTTCTGCCCTCAGTCATGAGGGGCTCCCTATCCTCCCATCCTATGGTCCCCCAAGGGCTGTGGTATaGAGTGGATACTCAGTAGGC +
Preference number: 4 (lower is better)
Translates to: ISSALSHEGLPILPSYGPPRAVV*SGYSVG
Trigger: GCCTACTGAGTATCCACTCCATACCACAGCCCTTGG...GGGACCATAGGATGGGAGGATAGGGAGCCCCTCATGACTGAGGGCAGAAGAAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CCA 90 bp CCAGGTGAAGGCATCTCTGCTCTGCATAGCTATTTGGCCCTGGCCATGACTACACTGGGCCAAGGGCTGTaGTATGGAGTGGATACTCAG +
Preference number: 4 (lower is better)
Translates to: PGEGISALHSYLALAMTTLGQGL*YGVDTQ
Trigger: CTGAGTATCCACTCCATACCACAGCCCTTGGCCCAG...TGTAGTCATGGCCAGGGCCAAATAGCTATGCAGAGCAGAGATGCCTTCACCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CCA 90 bp TTGGCCCTGGCCATGACTACAAGCAAAAGTGGGTGCAGATGGCTGGGCCAAGGGGAAAGGAAGACAAGTTaGTGCCAGGTGAAGGCATCT +
Preference number: 4 (lower is better)
Translates to: LALAMTTSKSGCRWLGQGERKTS*CQVKAS
Trigger: AGATGCCTTCACCTGGCACCAACTTGTCTTCCTTTC...CCCTTGGCCCAGCCATCTGCACCCACTTTTGCTTGTAGTCATGGCCAGGGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
3UTR CAA 72 bp GTGCCAGGTGAAGGCATCTCTGCTCTGCATAGCTATTaGGCCCTGGCCATGACTACAAGCAAAAGTGGGTGC +
Preference number: 4 (lower is better)
Translates to: VPGEGISALHSY*ALAMTTSKSGC
Trigger: GCACCCACTTTTGCTTGTAGTCATGGCCAGGGCCAAATAGCTATGCAGAGCAGAGATGCCTTCACCTGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR TCA 90 bp TATGGTATGTACTCAAGGCATGAGTCAGGGCTTCTGTACTACCCTCTGATCCCATTCTGCCCTCAGTCATaGGGGGCTCCCTATCCTCCC +
Preference number: 4 (lower is better)
Translates to: YGMYSRHESGLLYYPLIPFCPQS*GAPYPP
Trigger: GGGAGGATAGGGAGCCCCTCATGACTGAGGGCAGAA...TGGGATCAGAGGGTAGTACAGAAGCCCTGACTCATGCCTTGAGTACATACCATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR TCA 90 bp TTGCTACCATTTATTTGCTGTATGGTATGTACTCAAGGCATGAGTCAGGGCTTCTGTCGCAGAGCTACGTaGCTCCTCCGGGGGCGTGGC +
Preference number: 4 (lower is better)
Translates to: LLPFICCMVCTQGMSQGFCRRAT*LLRGRG
Trigger: GCCACGCCCCCGGAGGAGTCACGTAGCTCTGCGACA...GAAGCCCTGACTCATGCCTTGAGTACATACCATACAGCAAATAAATGGTAGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395321.6
CDS-3UTR GCA 90 bp TACTCAAGGCATGAGTCAGGGCTTCTGTACTACCCTCTGATCCCAGGAGACAGGGACAACTCCTTCTTCTaGTCAGCAGAAAGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: YSRHESGLLYYPLIPGDRDNSFF*SAERAG
Trigger: CCCAGCCCTTTCTGCTGAGCAGAAGAAGGAGTTGTC...CCTGTCTCCTGGGATCAGAGGGTAGTACAGAAGCCCTGACTCATGCCTTGAGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR GCA 90 bp CCAGGTGAAGGCATCTCTGCTCTGCATAGCTATTTGGCCCTGGCCATGACTACACTCCAGAATGGCAAGTaGAGAGGGTGTACGCTCACT +
Preference number: 4 (lower is better)
Translates to: PGEGISALHSYLALAMTTLQNGK*RGCTLT
Trigger: AGTGAGCGTACACCCTCTGCACTTGCCATTCTGGAG...TGTAGTCATGGCCAGGGCCAAATAGCTATGCAGAGCAGAGATGCCTTCACCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR GCA 90 bp TATGGTATGTACTCAAGGCATGAGTCAGGGCTTCTGTACTACCCTCTGATCCCATCGCCAGGCATTGAGTaGAGAGGCTTGCAGGGCACG +
Preference number: 4 (lower is better)
Translates to: YGMYSRHESGLLYYPLIPSPGIE*RGLQGT
Trigger: CGTGCCCTGCAAGCCTCTGCACTCAATGCCTGGCGA...TGGGATCAGAGGGTAGTACAGAAGCCCTGACTCATGCCTTGAGTACATACCATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR GCA 90 bp GGTGAAGGCATCTCTGCTCTGCATAGCTATTTGGCCCTGGCCATGACTACAAGCCACCATCTTCTCCACTaGCTTCATACTTGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: GEGISALHSYLALAMTTSHHLLH*LHTCPG
Trigger: CCCAGGGCAAGTATGAAGGCAGTGGAGAAGATGGTG...GCTTGTAGTCATGGCCAGGGCCAAATAGCTATGCAGAGCAGAGATGCCTTCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR GCA 90 bp TACTCAAGGCATGAGTCAGGGCTTCTGTACTACCCTCTGATCCCAGGAGACAGGCACCATCTTCTCCACTaGCTTCATACTTGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: YSRHESGLLYYPLIPGDRHHLLH*LHTCPG
Trigger: CCCAGGGCAAGTATGAAGGCAGTGGAGAAGATGGTG...CCTGTCTCCTGGGATCAGAGGGTAGTACAGAAGCCCTGACTCATGCCTTGAGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CCA 90 bp CTTCTAGCAATTTCTTCTGCCCTCAGTCATGAGGGGCTCCCTATCCTCCCATCCTGCCCTTATCCTGGATaGTTCGGACGAAGGGAACAC +
Preference number: 4 (lower is better)
Translates to: LLAISSALSHEGLPILPSCPYPG*FGRREH
Trigger: GTGTTCCCTTCGTCCGAACCATCCAGGATAAGGGCA...GGATGGGAGGATAGGGAGCCCCTCATGACTGAGGGCAGAAGAAATTGCTAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CCA 90 bp CCAGGTGAAGGCATCTCTGCTCTGCATAGCTATTTGGCCCTGGCCATGACTACAACGATGCCCTTATCCTaGATGGTTCGGACGAAGGGA +
Preference number: 4 (lower is better)
Translates to: PGEGISALHSYLALAMTTTMPLS*MVRTKG
Trigger: TCCCTTCGTCCGAACCATCCAGGATAAGGGCATCGT...TGTAGTCATGGCCAGGGCCAAATAGCTATGCAGAGCAGAGATGCCTTCACCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CCA 90 bp GGTGAAGGCATCTCTGCTCTGCATAGCTATTTGGCCCTGGCCATGACTACAAGCTGGCGTTCTCCAGAATaGCAAGTGCAGAGGGTGTAC +
Preference number: 4 (lower is better)
Translates to: GEGISALHSYLALAMTTSWRSPE*QVQRVY
Trigger: GTACACCCTCTGCACTTGCCATTCTGGAGAACGCCA...GCTTGTAGTCATGGCCAGGGCCAAATAGCTATGCAGAGCAGAGATGCCTTCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CCA 90 bp CTAGCAATTTCTTCTGCCCTCAGTCATGAGGGGCTCCCTATCCTCCCATCCTATCCTTCATACTTGCCCTaGGCTGCAAGCCCATTCACC +
Preference number: 4 (lower is better)
Translates to: LAISSALSHEGLPILPSYPSYLP*AASPFT
Trigger: GGTGAATGGGCTTGCAGCCCAGGGCAAGTATGAAGG...ATAGGATGGGAGGATAGGGAGCCCCTCATGACTGAGGGCAGAAGAAATTGCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CCA 90 bp CTTCTAGCAATTTCTTCTGCCCTCAGTCATGAGGGGCTCCCTATCCTCCCATCCCCAAGGGCTGTGGTATaGAGTGGATACTCAGTAGGC +
Preference number: 4 (lower is better)
Translates to: LLAISSALSHEGLPILPSPRAVV*SGYSVG
Trigger: GCCTACTGAGTATCCACTCCATACCACAGCCCTTGG...GGATGGGAGGATAGGGAGCCCCTCATGACTGAGGGCAGAAGAAATTGCTAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CCA 90 bp CCAGGTGAAGGCATCTCTGCTCTGCATAGCTATTTGGCCCTGGCCATGACTACACCAAGGGCTGTGGTATaGAGTGGATACTCAGTAGGC +
Preference number: 4 (lower is better)
Translates to: PGEGISALHSYLALAMTTPRAVV*SGYSVG
Trigger: GCCTACTGAGTATCCACTCCATACCACAGCCCTTGG...TGTAGTCATGGCCAGGGCCAAATAGCTATGCAGAGCAGAGATGCCTTCACCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CCA 90 bp CTTCTAGCAATTTCTTCTGCCCTCAGTCATGAGGGGCTCCCTATCCTCCCATCCGACTACAAGCAAAAGTaGGTGCAGATGGCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: LLAISSALSHEGLPILPSDYKQK*VQMAGP
Trigger: TGGCCCAGCCATCTGCACCCACTTTTGCTTGTAGTC...GGATGGGAGGATAGGGAGCCCCTCATGACTGAGGGCAGAAGAAATTGCTAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CCA 90 bp TACTCAAGGCATGAGTCAGGGCTTCTGTACTACCCTCTGATCCCAGGAGACAGGGACTACAAGCAAAAGTaGGTGCAGATGGCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: YSRHESGLLYYPLIPGDRDYKQK*VQMAGP
Trigger: TGGCCCAGCCATCTGCACCCACTTTTGCTTGTAGTC...CCTGTCTCCTGGGATCAGAGGGTAGTACAGAAGCCCTGACTCATGCCTTGAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR TCA 90 bp TATTTGCTGTATGGTATGTACTCAAGGCATGAGTCAGGGCTTCTGTACTACCCTAGGGCTGGGTACGAGTaGGGCATGGTGACAGCTCCC +
Preference number: 4 (lower is better)
Translates to: YLLYGMYSRHESGLLYYPRAGYE*GMVTAP
Trigger: GGGAGCTGTCACCATGCCTCACTCGTACCCAGCCCT...AGGGTAGTACAGAAGCCCTGACTCATGCCTTGAGTACATACCATACAGCAAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226253.9
ENST00000395319.7
CDS-3UTR TCA 90 bp TTGGCCCTGGCCATGACTACAAGCAAAAGTGGGTGCAGATGGCTGGGCCAAGGGTCTCATGGAAGAAAATaGCGCCTCCAATGCACTTTT +
Preference number: 4 (lower is better)
Translates to: LALAMTTSKSGCRWLGQGSHGRK*RLQCTF
Trigger: AAAAGTGCATTGGAGGCGTCATTTTCTTCCATGAGA...CCCTTGGCCCAGCCATCTGCACCCACTTTTGCTTGTAGTCATGGCCAGGGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR TCA 90 bp CCAGGTGAAGGCATCTCTGCTCTGCATAGCTATTTGGCCCTGGCCATGACTACAGGCATTGAGGTTGAATaGTGCCTCTTCTTCGCTCTG +
Preference number: 4 (lower is better)
Translates to: PGEGISALHSYLALAMTTGIEVE*CLFFAL
Trigger: CAGAGCGAAGAAGAGGCATCATTCAACCTCAATGCC...TGTAGTCATGGCCAGGGCCAAATAGCTATGCAGAGCAGAGATGCCTTCACCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR TCA 90 bp CTACCATTTATTTGCTGTATGGTATGTACTCAAGGCATGAGTCAGGGCTTCTGTGCCCTCGCCAGGCATTaGGTGCAGAGGCTTGCAGGG +
Preference number: 4 (lower is better)
Translates to: LPFICCMVCTQGMSQGFCALARH*VQRLAG
Trigger: CCCTGCAAGCCTCTGCACTCAATGCCTGGCGAGGGC...ACAGAAGCCCTGACTCATGCCTTGAGTACATACCATACAGCAAATAAATGGTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR TCA 90 bp GGTGAAGGCATCTCTGCTCTGCATAGCTATTTGGCCCTGGCCATGACTACAAGCATTTGGCCCTGGCCATaGCTACAAGCAAAAGTGGGT +
Preference number: 4 (lower is better)
Translates to: GEGISALHSYLALAMTTSIWPWP*LQAKVG
Trigger: ACCCACTTTTGCTTGTAGTCATGGCCAGGGCCAAAT...GCTTGTAGTCATGGCCAGGGCCAAATAGCTATGCAGAGCAGAGATGCCTTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR GCA 90 bp GGTGAAGGCATCTCTGCTCTGCATAGCTATTTGGCCCTGGCCATGACTACAAGCAAGGCATCTCTGCTCTaGATAGCTATTTGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: GEGISALHSYLALAMTTSKASLL*IAIWPW
Trigger: CCAGGGCCAAATAGCTATGCAGAGCAGAGATGCCTT...GCTTGTAGTCATGGCCAGGGCCAAATAGCTATGCAGAGCAGAGATGCCTTCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CCA 90 bp CTAGCAATTTCTTCTGCCCTCAGTCATGAGGGGCTCCCTATCCTCCCATCCTATACGATGCCCTTATCCTaGATGGTTCGGACGAAGGGA +
Preference number: 4 (lower is better)
Translates to: LAISSALSHEGLPILPSYTMPLS*MVRTKG
Trigger: TCCCTTCGTCCGAACCATCCAGGATAAGGGCATCGT...ATAGGATGGGAGGATAGGGAGCCCCTCATGACTGAGGGCAGAAGAAATTGCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CCA 90 bp ACCATTTATTTGCTGTATGGTATGTACTCAAGGCATGAGTCAGGGCTTCTGTACCACTCCTGGGACAGCTaGGGGCACAGTGCGACGCAG +
Preference number: 4 (lower is better)
Translates to: TIYLLYGMYSRHESGLLYHSWDS*GHSATQ
Trigger: CTGCGTCGCACTGTGCCCCCAGCTGTCCCAGGAGTG...GTACAGAAGCCCTGACTCATGCCTTGAGTACATACCATACAGCAAATAAATGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CCA 90 bp ATTTCTTCTGCCCTCAGTCATGAGGGGCTCCCTATCCTCCCATCCTATGGTCCCCTCAGTAGGCATGGTTaGCAATGTAGAGTGACTGTG +
Preference number: 4 (lower is better)
Translates to: ISSALSHEGLPILPSYGPLSRHG*QCRVTV
Trigger: CACAGTCACTCTACATTGCCAACCATGCCTACTGAG...GGGACCATAGGATGGGAGGATAGGGAGCCCCTCATGACTGAGGGCAGAAGAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CCA 90 bp CCAGGTGAAGGCATCTCTGCTCTGCATAGCTATTTGGCCCTGGCCATGACTACAGGCTGTGGTATGGAGTaGATACTCAGTAGGCATGGT +
Preference number: 4 (lower is better)
Translates to: PGEGISALHSYLALAMTTGCGME*ILSRHG
Trigger: ACCATGCCTACTGAGTATCCACTCCATACCACAGCC...TGTAGTCATGGCCAGGGCCAAATAGCTATGCAGAGCAGAGATGCCTTCACCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CCA 90 bp CTAGCAATTTCTTCTGCCCTCAGTCATGAGGGGCTCCCTATCCTCCCATCCTATGACTACAAGCAAAAGTaGGTGCAGATGGCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: LAISSALSHEGLPILPSYDYKQK*VQMAGP
Trigger: TGGCCCAGCCATCTGCACCCACTTTTGCTTGTAGTC...ATAGGATGGGAGGATAGGGAGCCCCTCATGACTGAGGGCAGAAGAAATTGCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR TCA 90 bp CTACCATTTATTTGCTGTATGGTATGTACTCAAGGCATGAGTCAGGGCTTCTGTACGAGTGAGGCATGGTaGCAGCTCCCTGTGCGCAGC +
Preference number: 4 (lower is better)
Translates to: LPFICCMVCTQGMSQGFCTSEAW*QLPVRS
Trigger: GCTGCGCACAGGGAGCTGTCACCATGCCTCACTCGT...ACAGAAGCCCTGACTCATGCCTTGAGTACATACCATACAGCAAATAAATGGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226253.9
ENST00000395319.7
CDS-3UTR TCA 90 bp CTAGCAATTTCTTCTGCCCTCAGTCATGAGGGGCTCCCTATCCTCCCATCCTATCATACTGACAACGTTTaGGGTCGTGGTCTCCATCAG +
Preference number: 4 (lower is better)
Translates to: LAISSALSHEGLPILPSYHTDNV*GRGLHQ
Trigger: CTGATGGAGACCACGACCTCAAACGTTGTCAGTATG...ATAGGATGGGAGGATAGGGAGCCCCTCATGACTGAGGGCAGAAGAAATTGCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226253.9
ENST00000395321.6
CDS-3UTR TCA 90 bp CTAGCAATTTCTTCTGCCCTCAGTCATGAGGGGCTCCCTATCCTCCCATCCTATGGCATTGAGGTTGAATaGTGCCTCTTCTTCGCTCTG +
Preference number: 4 (lower is better)
Translates to: LAISSALSHEGLPILPSYGIEVE*CLFFAL
Trigger: CAGAGCGAAGAAGAGGCATCATTCAACCTCAATGCC...ATAGGATGGGAGGATAGGGAGCCCCTCATGACTGAGGGCAGAAGAAATTGCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR TCA 90 bp TATGGTATGTACTCAAGGCATGAGTCAGGGCTTCTGTACTACCCTCTGATCCCAGTTGGCAATGTAGAGTaGCTGTGCTGCTGCTCCACC +
Preference number: 4 (lower is better)
Translates to: YGMYSRHESGLLYYPLIPVGNVE*LCCCST
Trigger: GGTGGAGCAGCAGCACAGTCACTCTACATTGCCAAC...TGGGATCAGAGGGTAGTACAGAAGCCCTGACTCATGCCTTGAGTACATACCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR TCA 90 bp CTAGCAATTTCTTCTGCCCTCAGTCATGAGGGGCTCCCTATCCTCCCATCCTATATTTGGCCCTGGCCATaGCTACAAGCAAAAGTGGGT +
Preference number: 4 (lower is better)
Translates to: LAISSALSHEGLPILPSYIWPWP*LQAKVG
Trigger: ACCCACTTTTGCTTGTAGTCATGGCCAGGGCCAAAT...ATAGGATGGGAGGATAGGGAGCCCCTCATGACTGAGGGCAGAAGAAATTGCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR TCA 90 bp TATGGTATGTACTCAAGGCATGAGTCAGGGCTTCTGTACTACCCTCTGATCCCACAAGTTGGTGCCAGGTaGAGGCATCTCTGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: YGMYSRHESGLLYYPLIPQVGAR*RHLCSA
Trigger: TGCAGAGCAGAGATGCCTTCACCTGGCACCAACTTG...TGGGATCAGAGGGTAGTACAGAAGCCCTGACTCATGCCTTGAGTACATACCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR GCA 90 bp TATGGTATGTACTCAAGGCATGAGTCAGGGCTTCTGTACTACCCTCTGATCCCACAGGGCAGTGACAGTTaGCATGGCAATCTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: YGMYSRHESGLLYYPLIPQGSDS*HGNLLW
Trigger: CCAGAGGAGATTGCCATGGCAACTGTCACTGCCCTG...TGGGATCAGAGGGTAGTACAGAAGCCCTGACTCATGCCTTGAGTACATACCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CCA 90 bp TATGGTATGTACTCAAGGCATGAGTCAGGGCTTCTGTACTACCCTCTGATCCCACTCAGCAGAAAGGGCTaGGTACGAGTGAGGCATGGT +
Preference number: 4 (lower is better)
Translates to: YGMYSRHESGLLYYPLIPLSRKG*VRVRHG
Trigger: ACCATGCCTCACTCGTACCCAGCCCTTTCTGCTGAG...TGGGATCAGAGGGTAGTACAGAAGCCCTGACTCATGCCTTGAGTACATACCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CCA 90 bp TATGGTATGTACTCAAGGCATGAGTCAGGGCTTCTGTACTACCCTCTGATCCCATTTGGCTCAGCCGCTTaGCCATGCTGCCTACAGACT +
Preference number: 4 (lower is better)
Translates to: YGMYSRHESGLLYYPLIPFGSAA*PCCLQT
Trigger: AGTCTGTAGGCAGCATGGCCAAGCGGCTGAGCCAAA...TGGGATCAGAGGGTAGTACAGAAGCCCTGACTCATGCCTTGAGTACATACCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CCA 90 bp TTTATTTGCTGTATGGTATGTACTCAAGGCATGAGTCAGGGCTTCTGTACTACCGCACTGAACAGGACCTaGCGGTACAGCCGGCGGTTC +
Preference number: 4 (lower is better)
Translates to: FICCMVCTQGMSQGFCTTALNRT*RYSRRF
Trigger: GAACCGCCGGCTGTACCGCCAGGTCCTGTTCAGTGC...GGTAGTACAGAAGCCCTGACTCATGCCTTGAGTACATACCATACAGCAAATAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CCA 90 bp TATGGTATGTACTCAAGGCATGAGTCAGGGCTTCTGTACTACCCTCTGATCCCAGCACACAGCGCCACTTaGCAAAGTCAGCACCATCCT +
Preference number: 4 (lower is better)
Translates to: YGMYSRHESGLLYYPLIPAHSAT*QSQHHP
Trigger: AGGATGGTGCTGACTTTGCCAAGTGGCGCTGTGTGC...TGGGATCAGAGGGTAGTACAGAAGCCCTGACTCATGCCTTGAGTACATACCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CCA 90 bp ATTTCTTCTGCCCTCAGTCATGAGGGGCTCCCTATCCTCCCATCCTATGGTCCCCAACGTTTGAGGTCGTaGTCTCCATCAGGCAATATT +
Preference number: 4 (lower is better)
Translates to: ISSALSHEGLPILPSYGPQRLRS*SPSGNI
Trigger: AATATTGCCTGATGGAGACCACGACCTCAAACGTTG...GGGACCATAGGATGGGAGGATAGGGAGCCCCTCATGACTGAGGGCAGAAGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226253.9
ENST00000395321.6
CDS-3UTR CCA 90 bp CTTCTAGCAATTTCTTCTGCCCTCAGTCATGAGGGGCTCCCTATCCTCCCATCCCTCAGTAGGCATGGTTaGCAATGTAGAGTGACTGTG +
Preference number: 4 (lower is better)
Translates to: LLAISSALSHEGLPILPSLSRHG*QCRVTV
Trigger: CACAGTCACTCTACATTGCCAACCATGCCTACTGAG...GGATGGGAGGATAGGGAGCCCCTCATGACTGAGGGCAGAAGAAATTGCTAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CCA 90 bp GGTGAAGGCATCTCTGCTCTGCATAGCTATTTGGCCCTGGCCATGACTACAAGCGAAAGGAAGACAAGTTaGTGCCAGGTGAAGGCATCT +
Preference number: 4 (lower is better)
Translates to: GEGISALHSYLALAMTTSERKTS*CQVKAS
Trigger: AGATGCCTTCACCTGGCACCAACTTGTCTTCCTTTC...GCTTGTAGTCATGGCCAGGGCCAAATAGCTATGCAGAGCAGAGATGCCTTCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CCA 90 bp CCAGGTGAAGGCATCTCTGCTCTGCATAGCTATTTGGCCCTGGCCATGACTACAGAAGCTACCTCATCATaGGAAAATTGTGGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: PGEGISALHSYLALAMTTEATSS*ENCGSW
Trigger: CCAGCTCCCACAATTTTCCCATGATGAGGTAGCTTC...TGTAGTCATGGCCAGGGCCAAATAGCTATGCAGAGCAGAGATGCCTTCACCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR TCA 90 bp TATTTGCTGTATGGTATGTACTCAAGGCATGAGTCAGGGCTTCTGTACTACCCTCACGGTCATCAGCACTaGACAGGACCTGGCGGTACA +
Preference number: 4 (lower is better)
Translates to: YLLYGMYSRHESGLLYYPHGHQH*TGPGGT
Trigger: TGTACCGCCAGGTCCTGTTCAGTGCTGATGACCGTG...AGGGTAGTACAGAAGCCCTGACTCATGCCTTGAGTACATACCATACAGCAAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR TCA 90 bp TTGCTACCATTTATTTGCTGTATGGTATGTACTCAAGGCATGAGTCAGGGCTTCCCTCTGGGGTATACTTaGTGGGACAGGCATGGCCCG +
Preference number: 4 (lower is better)
Translates to: LLPFICCMVCTQGMSQGFPLGYT*WDRHGP
Trigger: CGGGCCATGCCTGTCCCATCAAGTATACCCCAGAGG...GAAGCCCTGACTCATGCCTTGAGTACATACCATACAGCAAATAAATGGTAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR TCA 90 bp CTTCTAGCAATTTCTTCTGCCCTCAGTCATGAGGGGCTCCCTATCCTCCCATCCTATGTACTCAAGGCATaGGTCAGGGCTTCTGTACTA +
Preference number: 4 (lower is better)
Translates to: LLAISSALSHEGLPILPSYVLKA*VRASVL
Trigger: TAGTACAGAAGCCCTGACTCATGCCTTGAGTACATA...GGATGGGAGGATAGGGAGCCCCTCATGACTGAGGGCAGAAGAAATTGCTAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR GCA 90 bp TATTTGCTGTATGGTATGTACTCAAGGCATGAGTCAGGGCTTCTGTACTACCCTCCAGCATTGTCCCGTTaGCCTCGCCAGGCATTGAGT +
Preference number: 4 (lower is better)
Translates to: YLLYGMYSRHESGLLYYPPALSR*PRQALS
Trigger: ACTCAATGCCTGGCGAGGGCAACGGGACAATGCTGG...AGGGTAGTACAGAAGCCCTGACTCATGCCTTGAGTACATACCATACAGCAAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CCA 90 bp TATGGTATGTACTCAAGGCATGAGTCAGGGCTTCTGTACTACCCTCTGATCCCATTTTCCACCCCAATTTaGCTCAGCCGCTTGGCCATG +
Preference number: 4 (lower is better)
Translates to: YGMYSRHESGLLYYPLIPFSTPI*LSRLAM
Trigger: CATGGCCAAGCGGCTGAGCCAAATTGGGGTGGAAAA...TGGGATCAGAGGGTAGTACAGAAGCCCTGACTCATGCCTTGAGTACATACCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CCA 90 bp CTAGCAATTTCTTCTGCCCTCAGTCATGAGGGGCTCCCTATCCTCCCATCCTATCATGGCAATCTCCTCTaGGGTATACTTGATGGGACA +
Preference number: 4 (lower is better)
Translates to: LAISSALSHEGLPILPSYHGNLL*GILDGT
Trigger: TGTCCCATCAAGTATACCCCAGAGGAGATTGCCATG...ATAGGATGGGAGGATAGGGAGCCCCTCATGACTGAGGGCAGAAGAAATTGCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CCA 90 bp TTGCTACCATTTATTTGCTGTATGGTATGTACTCAAGGCATGAGTCAGGGCTTCCAGGAAGGTCACTCCTaGGACAGCTGGGGGCACAGT +
Preference number: 4 (lower is better)
Translates to: LLPFICCMVCTQGMSQGFQEGHS*DSWGHS
Trigger: ACTGTGCCCCCAGCTGTCCCAGGAGTGACCTTCCTG...GAAGCCCTGACTCATGCCTTGAGTACATACCATACAGCAAATAAATGGTAGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CCA 90 bp TTGCTACCATTTATTTGCTGTATGGTATGTACTCAAGGCATGAGTCAGGGCTTCGTGGGTGCAGATGGCTaGGCCAAGGGCTGTGGTATG +
Preference number: 4 (lower is better)
Translates to: LLPFICCMVCTQGMSQGFVGADG*AKGCGM
Trigger: CATACCACAGCCCTTGGCCCAGCCATCTGCACCCAC...GAAGCCCTGACTCATGCCTTGAGTACATACCATACAGCAAATAAATGGTAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR TCA 90 bp ACCATTTATTTGCTGTATGGTATGTACTCAAGGCATGAGTCAGGGCTTCTGTACCACGGTCATCAGCACTaGACAGGACCTGGCGGTACA +
Preference number: 4 (lower is better)
Translates to: TIYLLYGMYSRHESGLLYHGHQH*TGPGGT
Trigger: TGTACCGCCAGGTCCTGTTCAGTGCTGATGACCGTG...GTACAGAAGCCCTGACTCATGCCTTGAGTACATACCATACAGCAAATAAATGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR TCA 90 bp CCAGGTGAAGGCATCTCTGCTCTGCATAGCTATTTGGCCCTGGCCATGACTACATCTCATGGAAGAAAATaGCGCCTCCAATGCACTTTT +
Preference number: 4 (lower is better)
Translates to: PGEGISALHSYLALAMTTSHGRK*RLQCTF
Trigger: AAAAGTGCATTGGAGGCGTCATTTTCTTCCATGAGA...TGTAGTCATGGCCAGGGCCAAATAGCTATGCAGAGCAGAGATGCCTTCACCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR TCA 90 bp ACCATTTATTTGCTGTATGGTATGTACTCAAGGCATGAGTCAGGGCTTCTGTACCACCCTTGTCAACCTTaGTGCCCACGACGATGCCCT +
Preference number: 4 (lower is better)
Translates to: TIYLLYGMYSRHESGLLYHPCQP*CPRRCP
Trigger: AGGGCATCGTCGTGGGCATCAAGGTTGACAAGGGTG...GTACAGAAGCCCTGACTCATGCCTTGAGTACATACCATACAGCAAATAAATGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR TCA 90 bp ACCATTTATTTGCTGTATGGTATGTACTCAAGGCATGAGTCAGGGCTTCTGTACTGCGACGCAGGGCAGTaGCAGTTGCCATGGCAATCT +
Preference number: 4 (lower is better)
Translates to: TIYLLYGMYSRHESGLLYCDAGQ*QLPWQS
Trigger: AGATTGCCATGGCAACTGTCACTGCCCTGCGTCGCA...GTACAGAAGCCCTGACTCATGCCTTGAGTACATACCATACAGCAAATAAATGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR TCA 90 bp CTAGCAATTTCTTCTGCCCTCAGTCATGAGGGGCTCCCTATCCTCCCATCCTATTATGTACTCAAGGCATaGGTCAGGGCTTCTGTACTA +
Preference number: 4 (lower is better)
Translates to: LAISSALSHEGLPILPSYYVLKA*VRASVL
Trigger: TAGTACAGAAGCCCTGACTCATGCCTTGAGTACATA...ATAGGATGGGAGGATAGGGAGCCCCTCATGACTGAGGGCAGAAGAAATTGCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR GCA 90 bp TATTTGCTGTATGGTATGTACTCAAGGCATGAGTCAGGGCTTCTGTACTACCCTACAAGCAAAAGTGGGTaGAGATGGCTGGGCCAAGGG +
Preference number: 4 (lower is better)
Translates to: YLLYGMYSRHESGLLYYPTSKSG*RWLGQG
Trigger: CCCTTGGCCCAGCCATCTGCACCCACTTTTGCTTGT...AGGGTAGTACAGAAGCCCTGACTCATGCCTTGAGTACATACCATACAGCAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CCA 90 bp TATTTGCTGTATGGTATGTACTCAAGGCATGAGTCAGGGCTTCTGTACTACCCTGCACACAGCGCCACTTaGCAAAGTCAGCACCATCCT +
Preference number: 4 (lower is better)
Translates to: YLLYGMYSRHESGLLYYPAHSAT*QSQHHP
Trigger: AGGATGGTGCTGACTTTGCCAAGTGGCGCTGTGTGC...AGGGTAGTACAGAAGCCCTGACTCATGCCTTGAGTACATACCATACAGCAAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CCA 90 bp TATTTGCTGTATGGTATGTACTCAAGGCATGAGTCAGGGCTTCTGTACTACCCTAACGGGCCAGCACGTTaGCGTTCTCCAGAATGGCAA +
Preference number: 4 (lower is better)
Translates to: YLLYGMYSRHESGLLYYPNGPAR*RSPEWQ
Trigger: TTGCCATTCTGGAGAACGCCAACGTGCTGGCCCGTT...AGGGTAGTACAGAAGCCCTGACTCATGCCTTGAGTACATACCATACAGCAAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CCA 90 bp CTACCATTTATTTGCTGTATGGTATGTACTCAAGGCATGAGTCAGGGCTTCTGTTTGATGGGACAGGCATaGCCCGGGGTCACCATGTTG +
Preference number: 4 (lower is better)
Translates to: LPFICCMVCTQGMSQGFCLMGQA*PGVTML
Trigger: CAACATGGTGACCCCGGGCCATGCCTGTCCCATCAA...ACAGAAGCCCTGACTCATGCCTTGAGTACATACCATACAGCAAATAAATGGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CCA 90 bp ACCATTTATTTGCTGTATGGTATGTACTCAAGGCATGAGTCAGGGCTTCTGTACAAAAGTGGGTGCAGATaGCTGGGCCAAGGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: TIYLLYGMYSRHESGLLYKSGCR*LGQGLW
Trigger: CCACAGCCCTTGGCCCAGCCATCTGCACCCACTTTT...GTACAGAAGCCCTGACTCATGCCTTGAGTACATACCATACAGCAAATAAATGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR TCA 90 bp ACCATTTATTTGCTGTATGGTATGTACTCAAGGCATGAGTCAGGGCTTCTGTACAGGGTGTACGCTCACTaGTTTTCAGCACACAGCGCC +
Preference number: 4 (lower is better)
Translates to: TIYLLYGMYSRHESGLLYRVYAH*FSAHSA
Trigger: GGCGCTGTGTGCTGAAAATCAGTGAGCGTACACCCT...GTACAGAAGCCCTGACTCATGCCTTGAGTACATACCATACAGCAAATAAATGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR TCA 90 bp CTACCATTTATTTGCTGTATGGTATGTACTCAAGGCATGAGTCAGGGCTTCTGTAGGGTGTACGCTCACTaGTTTTCAGCACACAGCGCC +
Preference number: 4 (lower is better)
Translates to: LPFICCMVCTQGMSQGFCRVYAH*FSAHSA
Trigger: GGCGCTGTGTGCTGAAAATCAGTGAGCGTACACCCT...ACAGAAGCCCTGACTCATGCCTTGAGTACATACCATACAGCAAATAAATGGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR TCA 90 bp ACCATTTATTTGCTGTATGGTATGTACTCAAGGCATGAGTCAGGGCTTCTGTACGTTGGCAATGTAGAGTaGCTGTGCTGCTGCTCCACC +
Preference number: 4 (lower is better)
Translates to: TIYLLYGMYSRHESGLLYVGNVE*LCCCST
Trigger: GGTGGAGCAGCAGCACAGTCACTCTACATTGCCAAC...GTACAGAAGCCCTGACTCATGCCTTGAGTACATACCATACAGCAAATAAATGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR TCA 90 bp TTTATTTGCTGTATGGTATGTACTCAAGGCATGAGTCAGGGCTTCTGTACTACCCAAGTTGGTGCCAGGTaGAGGCATCTCTGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: FICCMVCTQGMSQGFCTTQVGAR*RHLCSA
Trigger: TGCAGAGCAGAGATGCCTTCACCTGGCACCAACTTG...GGTAGTACAGAAGCCCTGACTCATGCCTTGAGTACATACCATACAGCAAATAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR TCA 90 bp CTACCATTTATTTGCTGTATGGTATGTACTCAAGGCATGAGTCAGGGCTTCTGTCAAGTTGGTGCCAGGTaGAGGCATCTCTGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: LPFICCMVCTQGMSQGFCQVGAR*RHLCSA
Trigger: TGCAGAGCAGAGATGCCTTCACCTGGCACCAACTTG...ACAGAAGCCCTGACTCATGCCTTGAGTACATACCATACAGCAAATAAATGGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR GCA 90 bp TATTTGCTGTATGGTATGTACTCAAGGCATGAGTCAGGGCTTCTGTACTACCCTCTCCAGAATGGCAAGTaGAGAGGGTGTACGCTCACT +
Preference number: 4 (lower is better)
Translates to: YLLYGMYSRHESGLLYYPLQNGK*RGCTLT
Trigger: AGTGAGCGTACACCCTCTGCACTTGCCATTCTGGAG...AGGGTAGTACAGAAGCCCTGACTCATGCCTTGAGTACATACCATACAGCAAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CCA 90 bp TTGCTACCATTTATTTGCTGTATGGTATGTACTCAAGGCATGAGTCAGGGCTTCCTCAGCAGAAAGGGCTaGGTACGAGTGAGGCATGGT +
Preference number: 4 (lower is better)
Translates to: LLPFICCMVCTQGMSQGFLSRKG*VRVRHG
Trigger: ACCATGCCTCACTCGTACCCAGCCCTTTCTGCTGAG...GAAGCCCTGACTCATGCCTTGAGTACATACCATACAGCAAATAAATGGTAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CCA 90 bp CTACCATTTATTTGCTGTATGGTATGTACTCAAGGCATGAGTCAGGGCTTCTGTTTTGGCTCAGCCGCTTaGCCATGCTGCCTACAGACT +
Preference number: 4 (lower is better)
Translates to: LPFICCMVCTQGMSQGFCFGSAA*PCCLQT
Trigger: AGTCTGTAGGCAGCATGGCCAAGCGGCTGAGCCAAA...ACAGAAGCCCTGACTCATGCCTTGAGTACATACCATACAGCAAATAAATGGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CCA 90 bp TATTTGCTGTATGGTATGTACTCAAGGCATGAGTCAGGGCTTCTGTACTACCCTTGCCCTTATCCTGGATaGTTCGGACGAAGGGAACAC +
Preference number: 4 (lower is better)
Translates to: YLLYGMYSRHESGLLYYPCPYPG*FGRREH
Trigger: GTGTTCCCTTCGTCCGAACCATCCAGGATAAGGGCA...AGGGTAGTACAGAAGCCCTGACTCATGCCTTGAGTACATACCATACAGCAAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CCA 90 bp TATTTGCTGTATGGTATGTACTCAAGGCATGAGTCAGGGCTTCTGTACTACCCTACGATGCCCTTATCCTaGATGGTTCGGACGAAGGGA +
Preference number: 4 (lower is better)
Translates to: YLLYGMYSRHESGLLYYPTMPLS*MVRTKG
Trigger: TCCCTTCGTCCGAACCATCCAGGATAAGGGCATCGT...AGGGTAGTACAGAAGCCCTGACTCATGCCTTGAGTACATACCATACAGCAAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CCA 90 bp TTTATTTGCTGTATGGTATGTACTCAAGGCATGAGTCAGGGCTTCTGTACTACCCCAGCCCTTGAGTGGTaGTTTCTCCATCAGTCCCAG +
Preference number: 4 (lower is better)
Translates to: FICCMVCTQGMSQGFCTTPALEW*FLHQSQ
Trigger: CTGGGACTGATGGAGAAACCACCACTCAAGGGCTGG...GGTAGTACAGAAGCCCTGACTCATGCCTTGAGTACATACCATACAGCAAATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CCA 90 bp TTTATTTGCTGTATGGTATGTACTCAAGGCATGAGTCAGGGCTTCTGTACTACCAACGGGCCAGCACGTTaGCGTTCTCCAGAATGGCAA +
Preference number: 4 (lower is better)
Translates to: FICCMVCTQGMSQGFCTTNGPAR*RSPEWQ
Trigger: TTGCCATTCTGGAGAACGCCAACGTGCTGGCCCGTT...GGTAGTACAGAAGCCCTGACTCATGCCTTGAGTACATACCATACAGCAAATAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CCA 90 bp TTGCTACCATTTATTTGCTGTATGGTATGTACTCAAGGCATGAGTCAGGGCTTCAACGGGCCAGCACGTTaGCGTTCTCCAGAATGGCAA +
Preference number: 4 (lower is better)
Translates to: LLPFICCMVCTQGMSQGFNGPAR*RSPEWQ
Trigger: TTGCCATTCTGGAGAACGCCAACGTGCTGGCCCGTT...GAAGCCCTGACTCATGCCTTGAGTACATACCATACAGCAAATAAATGGTAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CCA 90 bp CTACCATTTATTTGCTGTATGGTATGTACTCAAGGCATGAGTCAGGGCTTCTGTCTGGGCCAAGGGCTGTaGTATGGAGTGGATACTCAG +
Preference number: 4 (lower is better)
Translates to: LPFICCMVCTQGMSQGFCLGQGL*YGVDTQ
Trigger: CTGAGTATCCACTCCATACCACAGCCCTTGGCCCAG...ACAGAAGCCCTGACTCATGCCTTGAGTACATACCATACAGCAAATAAATGGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CCA 90 bp TATGGTATGTACTCAAGGCATGAGTCAGGGCTTCTGTACTACCCTCTGATCCCAGAAAGGAAGACAAGTTaGTGCCAGGTGAAGGCATCT +
Preference number: 4 (lower is better)
Translates to: YGMYSRHESGLLYYPLIPERKTS*CQVKAS
Trigger: AGATGCCTTCACCTGGCACCAACTTGTCTTCCTTTC...TGGGATCAGAGGGTAGTACAGAAGCCCTGACTCATGCCTTGAGTACATACCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CCA 90 bp CTACCATTTATTTGCTGTATGGTATGTACTCAAGGCATGAGTCAGGGCTTCTGTATGAGGCTGCAGCCCTaGCTCCCTCTGGTAAATGAG +
Preference number: 4 (lower is better)
Translates to: LPFICCMVCTQGMSQGFCMRLQP*LPLVNE
Trigger: CTCATTTACCAGAGGGAGCCAGGGCTGCAGCCTCAT...ACAGAAGCCCTGACTCATGCCTTGAGTACATACCATACAGCAAATAAATGGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395321.6
CDS-3UTR TCA 90 bp TATGGTATGTACTCAAGGCATGAGTCAGGGCTTCTGTACTACCCTCTGATCCCATTCTCTGTAACATACTaGCAACGTTTGAGGTCGTGG +
Preference number: 4 (lower is better)
Translates to: YGMYSRHESGLLYYPLIPFSVTY*QRLRSW
Trigger: CCACGACCTCAAACGTTGTCAGTATGTTACAGAGAA...TGGGATCAGAGGGTAGTACAGAAGCCCTGACTCATGCCTTGAGTACATACCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226253.9
ENST00000395321.6
CDS-3UTR TCA 90 bp TATTTGCTGTATGGTATGTACTCAAGGCATGAGTCAGGGCTTCTGTACTACCCTGGCATTGAGGTTGAATaGTGCCTCTTCTTCGCTCTG +
Preference number: 4 (lower is better)
Translates to: YLLYGMYSRHESGLLYYPGIEVE*CLFFAL
Trigger: CAGAGCGAAGAAGAGGCATCATTCAACCTCAATGCC...AGGGTAGTACAGAAGCCCTGACTCATGCCTTGAGTACATACCATACAGCAAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR GCA 90 bp TTGCTACCATTTATTTGCTGTATGGTATGTACTCAAGGCATGAGTCAGGGCTTCGACAACTCCTTCTTCTaGTCAGCAGAAAGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: LLPFICCMVCTQGMSQGFDNSFF*SAERAG
Trigger: CCCAGCCCTTTCTGCTGAGCAGAAGAAGGAGTTGTC...GAAGCCCTGACTCATGCCTTGAGTACATACCATACAGCAAATAAATGGTAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR GCA 90 bp TTTATTTGCTGTATGGTATGTACTCAAGGCATGAGTCAGGGCTTCTGTACTACCCACCATCTTCTCCACTaGCTTCATACTTGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: FICCMVCTQGMSQGFCTTHHLLH*LHTCPG
Trigger: CCCAGGGCAAGTATGAAGGCAGTGGAGAAGATGGTG...GGTAGTACAGAAGCCCTGACTCATGCCTTGAGTACATACCATACAGCAAATAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR GCA 90 bp TATTTGCTGTATGGTATGTACTCAAGGCATGAGTCAGGGCTTCTGTACTACCCTAAGGCATCTCTGCTCTaGATAGCTATTTGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: YLLYGMYSRHESGLLYYPKASLL*IAIWPW
Trigger: CCAGGGCCAAATAGCTATGCAGAGCAGAGATGCCTT...AGGGTAGTACAGAAGCCCTGACTCATGCCTTGAGTACATACCATACAGCAAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR GCA 90 bp TATTTGCTGTATGGTATGTACTCAAGGCATGAGTCAGGGCTTCTGTACTACCCTAGGAAGACAAGTTGGTaGCAGGTGAAGGCATCTCTG +
Preference number: 4 (lower is better)
Translates to: YLLYGMYSRHESGLLYYPRKTSW*QVKASL
Trigger: CAGAGATGCCTTCACCTGGCACCAACTTGTCTTCCT...AGGGTAGTACAGAAGCCCTGACTCATGCCTTGAGTACATACCATACAGCAAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CCA 90 bp CTACCATTTATTTGCTGTATGGTATGTACTCAAGGCATGAGTCAGGGCTTCTGTTTTTCCACCCCAATTTaGCTCAGCCGCTTGGCCATG +
Preference number: 4 (lower is better)
Translates to: LPFICCMVCTQGMSQGFCFSTPI*LSRLAM
Trigger: CATGGCCAAGCGGCTGAGCCAAATTGGGGTGGAAAA...ACAGAAGCCCTGACTCATGCCTTGAGTACATACCATACAGCAAATAAATGGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CCA 90 bp ACCATTTATTTGCTGTATGGTATGTACTCAAGGCATGAGTCAGGGCTTCTGTACTGGCGTTCTCCAGAATaGCAAGTGCAGAGGGTGTAC +
Preference number: 4 (lower is better)
Translates to: TIYLLYGMYSRHESGLLYWRSPE*QVQRVY
Trigger: GTACACCCTCTGCACTTGCCATTCTGGAGAACGCCA...GTACAGAAGCCCTGACTCATGCCTTGAGTACATACCATACAGCAAATAAATGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CCA 90 bp CTACCATTTATTTGCTGTATGGTATGTACTCAAGGCATGAGTCAGGGCTTCTGTTGGCGTTCTCCAGAATaGCAAGTGCAGAGGGTGTAC +
Preference number: 4 (lower is better)
Translates to: LPFICCMVCTQGMSQGFCWRSPE*QVQRVY
Trigger: GTACACCCTCTGCACTTGCCATTCTGGAGAACGCCA...ACAGAAGCCCTGACTCATGCCTTGAGTACATACCATACAGCAAATAAATGGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR TCA 90 bp ACCATTTATTTGCTGTATGGTATGTACTCAAGGCATGAGTCAGGGCTTCTGTACCATACTGACAACGTTTaGGGTCGTGGTCTCCATCAG +
Preference number: 4 (lower is better)
Translates to: TIYLLYGMYSRHESGLLYHTDNV*GRGLHQ
Trigger: CTGATGGAGACCACGACCTCAAACGTTGTCAGTATG...GTACAGAAGCCCTGACTCATGCCTTGAGTACATACCATACAGCAAATAAATGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226253.9
ENST00000395321.6
CDS-3UTR GCA 90 bp CTACCATTTATTTGCTGTATGGTATGTACTCAAGGCATGAGTCAGGGCTTCTGTAGGAAGACAAGTTGGTaGCAGGTGAAGGCATCTCTG +
Preference number: 4 (lower is better)
Translates to: LPFICCMVCTQGMSQGFCRKTSW*QVKASL
Trigger: CAGAGATGCCTTCACCTGGCACCAACTTGTCTTCCT...ACAGAAGCCCTGACTCATGCCTTGAGTACATACCATACAGCAAATAAATGGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CCA 90 bp TATTTGCTGTATGGTATGTACTCAAGGCATGAGTCAGGGCTTCTGTACTACCCTGAAGCTACCTCATCATaGGAAAATTGTGGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: YLLYGMYSRHESGLLYYPEATSS*ENCGSW
Trigger: CCAGCTCCCACAATTTTCCCATGATGAGGTAGCTTC...AGGGTAGTACAGAAGCCCTGACTCATGCCTTGAGTACATACCATACAGCAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CCA 90 bp TTTATTTGCTGTATGGTATGTACTCAAGGCATGAGTCAGGGCTTCTGTACTACCCATGGCAATCTCCTCTaGGGTATACTTGATGGGACA +
Preference number: 4 (lower is better)
Translates to: FICCMVCTQGMSQGFCTTHGNLL*GILDGT
Trigger: TGTCCCATCAAGTATACCCCAGAGGAGATTGCCATG...GGTAGTACAGAAGCCCTGACTCATGCCTTGAGTACATACCATACAGCAAATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CCA 90 bp TTTATTTGCTGTATGGTATGTACTCAAGGCATGAGTCAGGGCTTCTGTACTACCGAAGCTACCTCATCATaGGAAAATTGTGGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: FICCMVCTQGMSQGFCTTEATSS*ENCGSW
Trigger: CCAGCTCCCACAATTTTCCCATGATGAGGTAGCTTC...GGTAGTACAGAAGCCCTGACTCATGCCTTGAGTACATACCATACAGCAAATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR TCA 90 bp CTACCATTTATTTGCTGTATGGTATGTACTCAAGGCATGAGTCAGGGCTTCTGTTTCTCTGTAACATACTaGCAACGTTTGAGGTCGTGG +
Preference number: 4 (lower is better)
Translates to: LPFICCMVCTQGMSQGFCFSVTY*QRLRSW
Trigger: CCACGACCTCAAACGTTGTCAGTATGTTACAGAGAA...ACAGAAGCCCTGACTCATGCCTTGAGTACATACCATACAGCAAATAAATGGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226253.9
ENST00000395321.6
CDS-3UTR TCA 90 bp TTGCTACCATTTATTTGCTGTATGGTATGTACTCAAGGCATGAGTCAGGGCTTCTATGTACTCAAGGCATaGGTCAGGGCTTCTGTACTA +
Preference number: 4 (lower is better)
Translates to: LLPFICCMVCTQGMSQGFYVLKA*VRASVL
Trigger: TAGTACAGAAGCCCTGACTCATGCCTTGAGTACATA...GAAGCCCTGACTCATGCCTTGAGTACATACCATACAGCAAATAAATGGTAGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR GCA 90 bp TTGCTACCATTTATTTGCTGTATGGTATGTACTCAAGGCATGAGTCAGGGCTTCGGCAAAAGTACTTATTaGCACCCTCTTCTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: LLPFICCMVCTQGMSQGFGKSTY*HPLLSA
Trigger: AGCTGAGAGAAGAGGGTGGCAATAAGTACTTTTGCC...GAAGCCCTGACTCATGCCTTGAGTACATACCATACAGCAAATAAATGGTAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395321.6
CDS-3UTR TCA 90 bp TTTATTTGCTGTATGGTATGTACTCAAGGCATGAGTCAGGGCTTCTGTACTACCTCTCATGGAAGAAAATaGCGCCTCCAATGCACTTTT +
Preference number: 4 (lower is better)
Translates to: FICCMVCTQGMSQGFCTTSHGRK*RLQCTF
Trigger: AAAAGTGCATTGGAGGCGTCATTTTCTTCCATGAGA...GGTAGTACAGAAGCCCTGACTCATGCCTTGAGTACATACCATACAGCAAATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CAA 90 bp GCCCTCAGTCATGAGGGGCTCCCTATCCTCCCATCCTATGGTCCCAGGTGCAGCTGCCCTCGCCAGGCATaGAGTGCAGAGGCTTGCAGG +
Preference number: 5 (lower is better)
Translates to: ALSHEGLPILPSYGPRCSCPRQA*SAEACR
Trigger: CCTGCAAGCCTCTGCACTCAATGCCTGGCGAGGGCA...GCTGCACCTGGGACCATAGGATGGGAGGATAGGGAGCCCCTCATGACTGAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CAA 90 bp TTGGCCCTGGCCATGACTACAAGCAAAAGTGGGTGCAGATGGCTGGGCCAAGGGGTGGCAGCCCCAGCATaGTCCCGTTGCCCTCGCCAG +
Preference number: 5 (lower is better)
Translates to: LALAMTTSKSGCRWLGQGVAAPA*SRCPRQ
Trigger: CTGGCGAGGGCAACGGGACAATGCTGGGGCTGCCAC...CCCTTGGCCCAGCCATCTGCACCCACTTTTGCTTGTAGTCATGGCCAGGGCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS CCA 90 bp CTCCTGGCCAGATGGGCCAAATGGCCTCCCCATCAAGCAAGGGGCTaGGAACAGGGCAGCAGTCCTTGGCATGAGTCCTGGGCATCAAGT +
Preference number: 5 (lower is better)
Translates to: LLARWAKWPPHQARG*EQGSSPWHESWASS
Trigger: ACTTGATGCCCAGGACTCATGCCAAGGACTGCTGCCCTGTTCCCAGCCCCTTGCTTGATGGGGAGGCCATTTGGCCCATCTGGCCAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460201.6
CDS-3UTR CAA 90 bp GCCCTCAGTCATGAGGGGCTCCCTATCCTCCCATCCTATGGTCCCAGGTGCAGCACACCCTTGTCAACCTaGATGCCCACGACGATGCCC +
Preference number: 5 (lower is better)
Translates to: ALSHEGLPILPSYGPRCSTPLST*MPTTMP
Trigger: GGGCATCGTCGTGGGCATCAAGGTTGACAAGGGTGT...GCTGCACCTGGGACCATAGGATGGGAGGATAGGGAGCCCCTCATGACTGAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS CCA 90 bp AGCACAGCTCGGGTTCTGATCCGCAAACAGATGAGGCTGCAGCCCTaGCTCCCTCTGGTAAATGAGGCTGCGGATGTCGCAGAGCTACGT +
Preference number: 5 (lower is better)
Translates to: STARVLIRKQMRLQP*LPLVNEAADVAELR
Trigger: ACGTAGCTCTGCGACATCCGCAGCCTCATTTACCAGAGGGAGCCAGGGCTGCAGCCTCATCTGTTTGCGGATCAGAACCCGAGCTGTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395321.6
CDS-3UTR CAA 90 bp ATTTCTTCTGCCCTCAGTCATGAGGGGCTCCCTATCCTCCCATCCTATGGTCCCGCAGCCAGAATGCCTTaGCCCGGGGCTACAATCCGC +
Preference number: 5 (lower is better)
Translates to: ISSALSHEGLPILPSYGPAARMP*PGATIR
Trigger: GCGGATTGTAGCCCCGGGCAAAGGCATTCTGGCTGC...GGGACCATAGGATGGGAGGATAGGGAGCCCCTCATGACTGAGGGCAGAAGAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CAA 90 bp GCCCTCAGTCATGAGGGGCTCCCTATCCTCCCATCCTATGGTCCCAGGTGCAGCGCTCTGCATAGCTATTaGGCCCTGGCCATGACTACA +
Preference number: 5 (lower is better)
Translates to: ALSHEGLPILPSYGPRCSALHSY*ALAMTT
Trigger: TGTAGTCATGGCCAGGGCCAAATAGCTATGCAGAGC...GCTGCACCTGGGACCATAGGATGGGAGGATAGGGAGCCCCTCATGACTGAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CAA 90 bp CTTCTAGCAATTTCTTCTGCCCTCAGTCATGAGGGGCTCCCTATCCTCCCATCCGCAGCCAGAATGCCTTaGCCCGGGGCTACAATCCGC +
Preference number: 5 (lower is better)
Translates to: LLAISSALSHEGLPILPSAARMP*PGATIR
Trigger: GCGGATTGTAGCCCCGGGCAAAGGCATTCTGGCTGC...GGATGGGAGGATAGGGAGCCCCTCATGACTGAGGGCAGAAGAAATTGCTAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CAA 90 bp TTTGGCCCTGGCCATGACTACAAGCAAAAGTGGGTGCAGATGGCTGGGCCAAGGAGAGGCACCACACCCTaGTCAACCTTGATGCCCACG +
Preference number: 5 (lower is better)
Translates to: FGPGHDYKQKWVQMAGPRRGTTP*STLMPT
Trigger: CGTGGGCATCAAGGTTGACAAGGGTGTGGTGCCTCT...CCTTGGCCCAGCCATCTGCACCCACTTTTGCTTGTAGTCATGGCCAGGGCCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CAA 90 bp TTTGGCCCTGGCCATGACTACAAGCAAAAGTGGGTGCAGATGGCTGGGCCAAGGTCCTCTGGGGTATACTaGATGGGACAGGCATGGCCC +
Preference number: 5 (lower is better)
Translates to: FGPGHDYKQKWVQMAGPRSSGVY*MGQAWP
Trigger: GGGCCATGCCTGTCCCATCAAGTATACCCCAGAGGA...CCTTGGCCCAGCCATCTGCACCCACTTTTGCTTGTAGTCATGGCCAGGGCCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CAA 90 bp TTTGGCCCTGGCCATGACTACAAGCAAAAGTGGGTGCAGATGGCTGGGCCAAGGATTGAGTGCAGAGGCTaGCAGGGCACGCCCATAGGA +
Preference number: 5 (lower is better)
Translates to: FGPGHDYKQKWVQMAGPRIECRG*QGTPIG
Trigger: TCCTATGGGCGTGCCCTGCAAGCCTCTGCACTCAAT...CCTTGGCCCAGCCATCTGCACCCACTTTTGCTTGTAGTCATGGCCAGGGCCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CAA 90 bp TACTCAAGGCATGAGTCAGGGCTTCTGTACTACCCTCTGATCCCAGGAGACAGGCCCAGCATTGTCCCGTaGCCCTCGCCAGGCATTGAG +
Preference number: 5 (lower is better)
Translates to: YSRHESGLLYYPLIPGDRPSIVP*PSPGIE
Trigger: CTCAATGCCTGGCGAGGGCAACGGGACAATGCTGGG...CCTGTCTCCTGGGATCAGAGGGTAGTACAGAAGCCCTGACTCATGCCTTGAGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CAA 90 bp TTGGCCCTGGCCATGACTACAAGCAAAAGTGGGTGCAGATGGCTGGGCCAAGGGTTCACCTCAGCCCGCTaGATGAACTCCTCAGTGGCA +
Preference number: 5 (lower is better)
Translates to: LALAMTTSKSGCRWLGQGFTSAR*MNSSVA
Trigger: TGCCACTGAGGAGTTCATCAAGCGGGCTGAGGTGAA...CCCTTGGCCCAGCCATCTGCACCCACTTTTGCTTGTAGTCATGGCCAGGGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CAA 90 bp ATTTCTTCTGCCCTCAGTCATGAGGGGCTCCCTATCCTCCCATCCTATGGTCCCCCACTGCCTTCATACTaGCCCTGGGCTGCAAGCCCA +
Preference number: 5 (lower is better)
Translates to: ISSALSHEGLPILPSYGPPLPSY*PWAASP
Trigger: TGGGCTTGCAGCCCAGGGCAAGTATGAAGGCAGTGG...GGGACCATAGGATGGGAGGATAGGGAGCCCCTCATGACTGAGGGCAGAAGAAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CAA 90 bp ATTTCTTCTGCCCTCAGTCATGAGGGGCTCCCTATCCTCCCATCCTATGGTCCCATTTGGCTCAGCCGCTaGGCCATGCTGCCTACAGAC +
Preference number: 5 (lower is better)
Translates to: ISSALSHEGLPILPSYGPIWLSR*AMLPTD
Trigger: GTCTGTAGGCAGCATGGCCAAGCGGCTGAGCCAAAT...GGGACCATAGGATGGGAGGATAGGGAGCCCCTCATGACTGAGGGCAGAAGAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CAA 90 bp CTAGCAATTTCTTCTGCCCTCAGTCATGAGGGGCTCCCTATCCTCCCATCCTATTGCCCTCGCCAGGCATaGAGTGCAGAGGCTTGCAGG +
Preference number: 5 (lower is better)
Translates to: LAISSALSHEGLPILPSYCPRQA*SAEACR
Trigger: CCTGCAAGCCTCTGCACTCAATGCCTGGCGAGGGCA...ATAGGATGGGAGGATAGGGAGCCCCTCATGACTGAGGGCAGAAGAAATTGCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CAA 90 bp GCCCTCAGTCATGAGGGGCTCCCTATCCTCCCATCCTATGGTCCCAGGTGCAGCAGGCAAAAGTACTTATaGCCACCCTCTTCTCTCAGC +
Preference number: 5 (lower is better)
Translates to: ALSHEGLPILPSYGPRCSRQKYL*PPSSLS
Trigger: GCTGAGAGAAGAGGGTGGCAATAAGTACTTTTGCCT...GCTGCACCTGGGACCATAGGATGGGAGGATAGGGAGCCCCTCATGACTGAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395321.6
CDS-3UTR CAA 90 bp ATTTCTTCTGCCCTCAGTCATGAGGGGCTCCCTATCCTCCCATCCTATGGTCCCGTTTTCCACCCCAATTaGGCTCAGCCGCTTGGCCAT +
Preference number: 5 (lower is better)
Translates to: ISSALSHEGLPILPSYGPVFHPN*AQPLGH
Trigger: ATGGCCAAGCGGCTGAGCCAAATTGGGGTGGAAAAC...GGGACCATAGGATGGGAGGATAGGGAGCCCCTCATGACTGAGGGCAGAAGAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CAA 90 bp CTTCTAGCAATTTCTTCTGCCCTCAGTCATGAGGGGCTCCCTATCCTCCCATCCAGAGGCACCACACCCTaGTCAACCTTGATGCCCACG +
Preference number: 5 (lower is better)
Translates to: LLAISSALSHEGLPILPSRGTTP*STLMPT
Trigger: CGTGGGCATCAAGGTTGACAAGGGTGTGGTGCCTCT...GGATGGGAGGATAGGGAGCCCCTCATGACTGAGGGCAGAAGAAATTGCTAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CAA 90 bp GGTGAAGGCATCTCTGCTCTGCATAGCTATTTGGCCCTGGCCATGACTACAAGCTCCTCTGGGGTATACTaGATGGGACAGGCATGGCCC +
Preference number: 5 (lower is better)
Translates to: GEGISALHSYLALAMTTSSSGVY*MGQAWP
Trigger: GGGCCATGCCTGTCCCATCAAGTATACCCCAGAGGA...GCTTGTAGTCATGGCCAGGGCCAAATAGCTATGCAGAGCAGAGATGCCTTCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS GCA 90 bp CTGCATAGCTATTTGGCCCTGGCCATGACTACAAGCAAAAGTGGGTaGAGATGGCTGGGCCAAGGGCTGTGGTATGGAGTGGATACTCAG +
Preference number: 5 (lower is better)
Translates to: LHSYLALAMTTSKSG*RWLGQGLWYGVDTQ
Trigger: CTGAGTATCCACTCCATACCACAGCCCTTGGCCCAGCCATCTGCACCCACTTTTGCTTGTAGTCATGGCCAGGGCCAAATAGCTATGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS CCA 90 bp TGGGCCAAGGGCTGTGGTATGGAGTGGATACTCAGTAGGCATGGTTaGCAATGTAGAGTGACTGTGCTGCTGCTCCACCATCTTCTCCAC +
Preference number: 5 (lower is better)
Translates to: WAKGCGMEWILSRHG*QCRVTVLLLHHLLH
Trigger: GTGGAGAAGATGGTGGAGCAGCAGCACAGTCACTCTACATTGCCAACCATGCCTACTGAGTATCCACTCCATACCACAGCCCTTGGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS CCA 90 bp GCAAAAGTGGGTGCAGATGGCTGGGCCAAGGGCTGTGGTATGGAGTaGATACTCAGTAGGCATGGTTGGCAATGTAGAGTGACTGTGCTG +
Preference number: 5 (lower is better)
Translates to: AKVGADGWAKGCGME*ILSRHGWQCRVTVL
Trigger: CAGCACAGTCACTCTACATTGCCAACCATGCCTACTGAGTATCCACTCCATACCACAGCCCTTGGCCCAGCCATCTGCACCCACTTTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CAA 90 bp GGTGAAGGCATCTCTGCTCTGCATAGCTATTTGGCCCTGGCCATGACTACAAGCGTTTTCCACCCCAATTaGGCTCAGCCGCTTGGCCAT +
Preference number: 5 (lower is better)
Translates to: GEGISALHSYLALAMTTSVFHPN*AQPLGH
Trigger: ATGGCCAAGCGGCTGAGCCAAATTGGGGTGGAAAAC...GCTTGTAGTCATGGCCAGGGCCAAATAGCTATGCAGAGCAGAGATGCCTTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CAA 90 bp CTAGCAATTTCTTCTGCCCTCAGTCATGAGGGGCTCCCTATCCTCCCATCCTATATTGAGTGCAGAGGCTaGCAGGGCACGCCCATAGGA +
Preference number: 5 (lower is better)
Translates to: LAISSALSHEGLPILPSYIECRG*QGTPIG
Trigger: TCCTATGGGCGTGCCCTGCAAGCCTCTGCACTCAAT...ATAGGATGGGAGGATAGGGAGCCCCTCATGACTGAGGGCAGAAGAAATTGCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CAA 90 bp TTGCTACCATTTATTTGCTGTATGGTATGTACTCAAGGCATGAGTCAGGGCTTCGTGGCAGCCCCAGCATaGTCCCGTTGCCCTCGCCAG +
Preference number: 5 (lower is better)
Translates to: LLPFICCMVCTQGMSQGFVAAPA*SRCPRQ
Trigger: CTGGCGAGGGCAACGGGACAATGCTGGGGCTGCCAC...GAAGCCCTGACTCATGCCTTGAGTACATACCATACAGCAAATAAATGGTAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS TCA 90 bp GCACCACACCCTTGTCAACCTGTAGAGGAAGTACAAGCAGAGGGTTaGATCCAGGCAGGATTCTCCTTGCTACCCCTCCTACACAAGCTT +
Preference number: 5 (lower is better)
Translates to: APHPCQPVEEVQAEG*IQAGFSLLPLLHKL
Trigger: AAGCTTGTGTAGGAGGGGTAGCAAGGAGAATCCTGCCTGGATTCAACCCTCTGCTTGTACTTCCTCTACAGGTTGACAAGGGTGTGGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582381.1
CDS-3UTR CAA 90 bp TATGGTATGTACTCAAGGCATGAGTCAGGGCTTCTGTACTACCCTCTGATCCCATCCTCTGGGGTATACTaGATGGGACAGGCATGGCCC +
Preference number: 5 (lower is better)
Translates to: YGMYSRHESGLLYYPLIPSSGVY*MGQAWP
Trigger: GGGCCATGCCTGTCCCATCAAGTATACCCCAGAGGA...TGGGATCAGAGGGTAGTACAGAAGCCCTGACTCATGCCTTGAGTACATACCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CAA 90 bp TATTTGCTGTATGGTATGTACTCAAGGCATGAGTCAGGGCTTCTGTACTACCCTCCCAGCATTGTCCCGTaGCCCTCGCCAGGCATTGAG +
Preference number: 5 (lower is better)
Translates to: YLLYGMYSRHESGLLYYPPSIVP*PSPGIE
Trigger: CTCAATGCCTGGCGAGGGCAACGGGACAATGCTGGG...AGGGTAGTACAGAAGCCCTGACTCATGCCTTGAGTACATACCATACAGCAAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CAA 90 bp TACTCAAGGCATGAGTCAGGGCTTCTGTACTACCCTCTGATCCCAGGAGACAGGAGAAAGGAAGACAAGTaGGTGCCAGGTGAAGGCATC +
Preference number: 5 (lower is better)
Translates to: YSRHESGLLYYPLIPGDRRKEDK*VPGEGI
Trigger: GATGCCTTCACCTGGCACCAACTTGTCTTCCTTTCT...CCTGTCTCCTGGGATCAGAGGGTAGTACAGAAGCCCTGACTCATGCCTTGAGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CAA 90 bp TTGCTACCATTTATTTGCTGTATGGTATGTACTCAAGGCATGAGTCAGGGCTTCGCAGCCAGAATGCCTTaGCCCGGGGCTACAATCCGC +
Preference number: 5 (lower is better)
Translates to: LLPFICCMVCTQGMSQGFAARMP*PGATIR
Trigger: GCGGATTGTAGCCCCGGGCAAAGGCATTCTGGCTGC...GAAGCCCTGACTCATGCCTTGAGTACATACCATACAGCAAATAAATGGTAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CAA 90 bp CTACCATTTATTTGCTGTATGGTATGTACTCAAGGCATGAGTCAGGGCTTCTGTTGCCCTCGCCAGGCATaGAGTGCAGAGGCTTGCAGG +
Preference number: 5 (lower is better)
Translates to: LPFICCMVCTQGMSQGFCCPRQA*SAEACR
Trigger: CCTGCAAGCCTCTGCACTCAATGCCTGGCGAGGGCA...ACAGAAGCCCTGACTCATGCCTTGAGTACATACCATACAGCAAATAAATGGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CAA 90 bp CTACCATTTATTTGCTGTATGGTATGTACTCAAGGCATGAGTCAGGGCTTCTGTCCCAGCATTGTCCCGTaGCCCTCGCCAGGCATTGAG +
Preference number: 5 (lower is better)
Translates to: LPFICCMVCTQGMSQGFCPSIVP*PSPGIE
Trigger: CTCAATGCCTGGCGAGGGCAACGGGACAATGCTGGG...ACAGAAGCCCTGACTCATGCCTTGAGTACATACCATACAGCAAATAAATGGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS TCA 90 bp GTGGTATGGAGTGGATACTCAGTAGGCATGGTTGGCAATGTAGAGTaGCTGTGCTGCTGCTCCACCATCTTCTCCACTGCCTTCATACTT +
Preference number: 5 (lower is better)
Translates to: VVWSGYSVGMVGNVE*LCCCSTIFSTAFIL
Trigger: AAGTATGAAGGCAGTGGAGAAGATGGTGGAGCAGCAGCACAGTCACTCTACATTGCCAACCATGCCTACTGAGTATCCACTCCATACCAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CAA 90 bp TATTTGCTGTATGGTATGTACTCAAGGCATGAGTCAGGGCTTCTGTACTACCCTATTTGGCTCAGCCGCTaGGCCATGCTGCCTACAGAC +
Preference number: 5 (lower is better)
Translates to: YLLYGMYSRHESGLLYYPIWLSR*AMLPTD
Trigger: GTCTGTAGGCAGCATGGCCAAGCGGCTGAGCCAAAT...AGGGTAGTACAGAAGCCCTGACTCATGCCTTGAGTACATACCATACAGCAAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CAA 90 bp TATTTGCTGTATGGTATGTACTCAAGGCATGAGTCAGGGCTTCTGTACTACCCTATTGAGTGCAGAGGCTaGCAGGGCACGCCCATAGGA +
Preference number: 5 (lower is better)
Translates to: YLLYGMYSRHESGLLYYPIECRG*QGTPIG
Trigger: TCCTATGGGCGTGCCCTGCAAGCCTCTGCACTCAAT...AGGGTAGTACAGAAGCCCTGACTCATGCCTTGAGTACATACCATACAGCAAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CAA 90 bp CTACCATTTATTTGCTGTATGGTATGTACTCAAGGCATGAGTCAGGGCTTCTGTCCACTGCCTTCATACTaGCCCTGGGCTGCAAGCCCA +
Preference number: 5 (lower is better)
Translates to: LPFICCMVCTQGMSQGFCPLPSY*PWAASP
Trigger: TGGGCTTGCAGCCCAGGGCAAGTATGAAGGCAGTGG...ACAGAAGCCCTGACTCATGCCTTGAGTACATACCATACAGCAAATAAATGGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CAA 90 bp TTTATTTGCTGTATGGTATGTACTCAAGGCATGAGTCAGGGCTTCTGTACTACCACACCCTTGTCAACCTaGATGCCCACGACGATGCCC +
Preference number: 5 (lower is better)
Translates to: FICCMVCTQGMSQGFCTTTPLST*MPTTMP
Trigger: GGGCATCGTCGTGGGCATCAAGGTTGACAAGGGTGT...GGTAGTACAGAAGCCCTGACTCATGCCTTGAGTACATACCATACAGCAAATAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CAA 90 bp TTGCTACCATTTATTTGCTGTATGGTATGTACTCAAGGCATGAGTCAGGGCTTCACACCCTTGTCAACCTaGATGCCCACGACGATGCCC +
Preference number: 5 (lower is better)
Translates to: LLPFICCMVCTQGMSQGFTPLST*MPTTMP
Trigger: GGGCATCGTCGTGGGCATCAAGGTTGACAAGGGTGT...GAAGCCCTGACTCATGCCTTGAGTACATACCATACAGCAAATAAATGGTAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CAA 90 bp CTACCATTTATTTGCTGTATGGTATGTACTCAAGGCATGAGTCAGGGCTTCTGTAGAGGCACCACACCCTaGTCAACCTTGATGCCCACG +
Preference number: 5 (lower is better)
Translates to: LPFICCMVCTQGMSQGFCRGTTP*STLMPT
Trigger: CGTGGGCATCAAGGTTGACAAGGGTGTGGTGCCTCT...ACAGAAGCCCTGACTCATGCCTTGAGTACATACCATACAGCAAATAAATGGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CAA 90 bp TATTTGCTGTATGGTATGTACTCAAGGCATGAGTCAGGGCTTCTGTACTACCCTTTCACCTCAGCCCGCTaGATGAACTCCTCAGTGGCA +
Preference number: 5 (lower is better)
Translates to: YLLYGMYSRHESGLLYYPFTSAR*MNSSVA
Trigger: TGCCACTGAGGAGTTCATCAAGCGGGCTGAGGTGAA...AGGGTAGTACAGAAGCCCTGACTCATGCCTTGAGTACATACCATACAGCAAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CAA 90 bp ACCATTTATTTGCTGTATGGTATGTACTCAAGGCATGAGTCAGGGCTTCTGTACGTTTTCCACCCCAATTaGGCTCAGCCGCTTGGCCAT +
Preference number: 5 (lower is better)
Translates to: TIYLLYGMYSRHESGLLYVFHPN*AQPLGH
Trigger: ATGGCCAAGCGGCTGAGCCAAATTGGGGTGGAAAAC...GTACAGAAGCCCTGACTCATGCCTTGAGTACATACCATACAGCAAATAAATGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CAA 90 bp ACCATTTATTTGCTGTATGGTATGTACTCAAGGCATGAGTCAGGGCTTCTGTACGCTCTGCATAGCTATTaGGCCCTGGCCATGACTACA +
Preference number: 5 (lower is better)
Translates to: TIYLLYGMYSRHESGLLYALHSY*ALAMTT
Trigger: TGTAGTCATGGCCAGGGCCAAATAGCTATGCAGAGC...GTACAGAAGCCCTGACTCATGCCTTGAGTACATACCATACAGCAAATAAATGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CAA 90 bp TTTATTTGCTGTATGGTATGTACTCAAGGCATGAGTCAGGGCTTCTGTACTACCAGAAAGGAAGACAAGTaGGTGCCAGGTGAAGGCATC +
Preference number: 5 (lower is better)
Translates to: FICCMVCTQGMSQGFCTTRKEDK*VPGEGI
Trigger: GATGCCTTCACCTGGCACCAACTTGTCTTCCTTTCT...GGTAGTACAGAAGCCCTGACTCATGCCTTGAGTACATACCATACAGCAAATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS-3UTR CAA 90 bp CTACCATTTATTTGCTGTATGGTATGTACTCAAGGCATGAGTCAGGGCTTCTGTAGAAAGGAAGACAAGTaGGTGCCAGGTGAAGGCATC +
Preference number: 5 (lower is better)
Translates to: LPFICCMVCTQGMSQGFCRKEDK*VPGEGI
Trigger: GATGCCTTCACCTGGCACCAACTTGTCTTCCTTTCT...ACAGAAGCCCTGACTCATGCCTTGAGTACATACCATACAGCAAATAAATGGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS CCA 72 bp TGCCTATTCCCACCCAGTACCAGAGGTTGGCCCCAGTaGGGCTGCAGTGATGTAGGAAAGAGGGCCCAGCGG +
Preference number: 6 (lower is better)
Translates to: CLFPPSTRGWPQ*GCSDVGKRAQR
Trigger: CCGCTGGGCCCTCTTTCCTACATCACTGCAGCCCCACTGGGGCCAACCTCTGGTACTGGGTGGGAATAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578590.1
CDS GCA 72 bp TGGCCATGCTGCCTACAGACTCATCCGCAGCCAGAATaGCTTTGCCCGGGGCTACAATCCGCAGGGCAATGT +
Preference number: 6 (lower is better)
Translates to: WPCCLQTHPQPE*LCPGLQSAGQC
Trigger: ACATTGCCCTGCGGATTGTAGCCCCGGGCAAAGGCATTCTGGCTGCGGATGAGTCTGTAGGCAGCATGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
ENST00000435638.5
ENST00000460201.6
ENST00000578590.1
ENST00000581807.5
ENST00000582381.1
ENST00000584086.5
CDS TCA 72 bp CGCCTCCAATGCACTTTTTCACACGGTCATCAGCACTaGACAGGACCTGGCGGTACAGCCGGCGGTTCTCCT +
Preference number: 6 (lower is better)
Translates to: RLQCTFSHGHQH*TGPGGTAGGSP
Trigger: AGGAGAACCGCCGGCTGTACCGCCAGGTCCTGTTCAGTGCTGATGACCGTGTGAAAAAGTGCATTGGAGGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
ENST00000435638.5
ENST00000460201.6
ENST00000578590.1
ENST00000581807.5
ENST00000582381.1
ENST00000584086.5
CDS GCA 72 bp TGCTGCCTACAGACTCATCCGCAGCCAGAATGCCTTTaGCCGGGGCTACAATCCGCAGGGCAATGTCAGACA +
Preference number: 6 (lower is better)
Translates to: CCLQTHPQPECL*PGLQSAGQCQT
Trigger: TGTCTGACATTGCCCTGCGGATTGTAGCCCCGGGCAAAGGCATTCTGGCTGCGGATGAGTCTGTAGGCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
ENST00000435638.5
ENST00000460201.6
ENST00000578590.1
ENST00000581807.5
ENST00000582381.1
ENST00000584086.5
CDS CAA 72 bp ATGCTGCCTACAGACTCATCCGCAGCCAGAATGCCTTaGCCCGGGGCTACAATCCGCAGGGCAATGTCAGAC +
Preference number: 6 (lower is better)
Translates to: MLPTDSSAARMP*PGATIRRAMSD
Trigger: GTCTGACATTGCCCTGCGGATTGTAGCCCCGGGCAAAGGCATTCTGGCTGCGGATGAGTCTGTAGGCAGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
ENST00000435638.5
ENST00000460201.6
ENST00000578590.1
ENST00000581807.5
ENST00000582381.1
ENST00000584086.5
CDS CAA 90 bp AGTGACTGTGCTGCTGCTCCACCATCTTCTCCACTGCCTTCATACTaGCCCTGGGCTGCAAGCCCATTCACCTCAGCCCGCTTGATGAAC +
Preference number: 6 (lower is better)
Translates to: SDCAAAPPSSPLPSY*PWAASPFTSARLMN
Trigger: GTTCATCAAGCGGGCTGAGGTGAATGGGCTTGCAGCCCAGGGCAAGTATGAAGGCAGTGGAGAAGATGGTGGAGCAGCAGCACAGTCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS CCA 72 bp GCCCTGGCCATGACTACAAGCAAAAGTGGGTGCAGATaGCTGGGCCAAGGGCTGTGGTATGGAGTGGATACT +
Preference number: 6 (lower is better)
Translates to: ALAMTTSKSGCR*LGQGLWYGVDT
Trigger: AGTATCCACTCCATACCACAGCCCTTGGCCCAGCCATCTGCACCCACTTTTGCTTGTAGTCATGGCCAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS CAA 72 bp TCCTCTGTGTTTTCCACCCCAATTTGGCTCAGCCGCTaGGCCATGCTGCCTACAGACTCATCCGCAGCCAGA +
Preference number: 6 (lower is better)
Translates to: SSVFSTPIWLSR*AMLPTDSSAAR
Trigger: TCTGGCTGCGGATGAGTCTGTAGGCAGCATGGCCAAGCGGCTGAGCCAAATTGGGGTGGAAAACACAGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
ENST00000435638.5
ENST00000460201.6
ENST00000578590.1
ENST00000581807.5
ENST00000582381.1
ENST00000584086.5
CDS CAA 72 bp CTAGCAAGCTTAGGGCTCCAGTTCCCACATCTCCTTTaGTCCCTGGTAGGCATCCTTCCCAGCCCTGGGGAA +
Preference number: 6 (lower is better)
Translates to: LASLGLQFPHLL*SLVGILPSPGE
Trigger: TTCCCCAGGGCTGGGAAGGATGCCTACCAGGGACAAAAGGAGATGTGGGAACTGGAGCCCTAAGCTTGCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460201.6
CDS CCA 72 bp GGTGCAGATGGCTGGGCCAAGGGCTGTGGTATGGAGTaGATACTCAGTAGGCATGGTTGGCAATGTAGAGTG +
Preference number: 6 (lower is better)
Translates to: GADGWAKGCGME*ILSRHGWQCRV
Trigger: CACTCTACATTGCCAACCATGCCTACTGAGTATCCACTCCATACCACAGCCCTTGGCCCAGCCATCTGCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS CCA 72 bp AAGTGGGTGCAGATGGCTGGGCCAAGGGCTGTGGTATaGAGTGGATACTCAGTAGGCATGGTTGGCAATGTA +
Preference number: 6 (lower is better)
Translates to: KWVQMAGPRAVV*SGYSVGMVGNV
Trigger: TACATTGCCAACCATGCCTACTGAGTATCCACTCCATACCACAGCCCTTGGCCCAGCCATCTGCACCCACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS CCA 72 bp GGCTGCACCTTGATGCCCACGACGATGCCCTTATCCTaGATGGTTCGGACGAAGGGAACACCATTATCATCT +
Preference number: 6 (lower is better)
Translates to: GCTLMPTTMPLS*MVRTKGTPLSS
Trigger: AGATGATAATGGTGTTCCCTTCGTCCGAACCATCCAGGATAAGGGCATCGTCGTGGGCATCAAGGTGCAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582381.1
CDS TCA 72 bp AGTGGATACTCAGTAGGCATGGTTGGCAATGTAGAGTaGCTGTGCTGCTGCTCCACCATCTTCTCCACTGCC +
Preference number: 6 (lower is better)
Translates to: SGYSVGMVGNVE*LCCCSTIFSTA
Trigger: GGCAGTGGAGAAGATGGTGGAGCAGCAGCACAGTCACTCTACATTGCCAACCATGCCTACTGAGTATCCACT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
CDS GCA 72 bp GGCTCCTGCAGCTTCTCCTTTTCTGTACTCCAAACCTaGCTGCCTATGCCTATTGCCTATTCCCACCCAGTA +
Preference number: 6 (lower is better)
Translates to: GSCSFSFSVLQT*LPMPIAYSHPV
Trigger: TACTGGGTGGGAATAGGCAATAGGCATAGGCAGGCAGGTTTGGAGTACAGAAAAGGAGAAGCTGCAGGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578590.1
CDS CAA 90 bp GGTGACAGCTCCTTCCAAGGCTTCAGAATGAGGCAAAAGTACTTATaGCCACCCTCTTCTCTCAGCTTCTGTGCGCAGCCAGTTAGCAGC +
Preference number: 6 (lower is better)
Translates to: GDSSFQGFRMRQKYL*PPSSLSFCAQPVSS
Trigger: GCTGCTAACTGGCTGCGCACAGAAGCTGAGAGAAGAGGGTGGCAATAAGTACTTTTGCCTCATTCTGAAGCCTTGGAAGGAGCTGTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395321.6
CDS TCA 72 bp CCTTGTCAACCTGTAGAGGAAGTACAAGCAGAGGGTTaGATCCAGGCAGGATTCTCCTTGCTACCCCTCCTA +
Preference number: 6 (lower is better)
Translates to: PCQPVEEVQAEG*IQAGFSLLPLL
Trigger: TAGGAGGGGTAGCAAGGAGAATCCTGCCTGGATTCAACCCTCTGCTTGTACTTCCTCTACAGGTTGACAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582381.1
CDS CCA 72 bp TTGTCAACCTTGATGCCCACGACGATGCCCTTATCCTaGATGGTTCGGACGAAGGGAACACCATTATCATCT +
Preference number: 6 (lower is better)
Translates to: LSTLMPTTMPLS*MVRTKGTPLSS
Trigger: AGATGATAATGGTGTTCCCTTCGTCCGAACCATCCAGGATAAGGGCATCGTCGTGGGCATCAAGGTTGACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000226253.9
ENST00000395319.7
ENST00000395321.6
ENST00000435638.5
ENST00000460201.6
ENST00000578590.1
ENST00000581807.5
ENST00000584086.5
CDS CAA 72 bp TCCTTCCAAGGCTTCAGAATGAGGCAAAAGTACTTATaGCCACCCTCTTCTCTCAGCTGTGCGCAGCCAGTT +
Preference number: 6 (lower is better)
Translates to: SFQGFRMRQKYL*PPSSLSCAQPV
Trigger: AACTGGCTGCGCACAGCTGAGAGAAGAGGGTGGCAATAAGTACTTTTGCCTCATTCTGAAGCCTTGGAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584086.5