RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ALDOB (Homo sapiens)

Ensembl gene IDs: ENSG00000136872

Ensembl transcript IDs: ENST00000616752.1, ENST00000647789.2, ENST00000648064.1, ENST00000648758.1, ENST00000648906.1, ENST00000649902.1, ENST00000650613.1

Found 397 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCTGTGAAGAGCGACTGGGTGGAAGCAGCCCCAGAAGAACCCGTGTaGACATACTGTCCTTTGGCCGCCTGGCAGTTAGCCATGGCCCGC +
Preference number: 1 (lower is better)
Translates to: AVKSDWVEAAPEEPV*TYCPLAAWQLAMAR
Trigger: GCGGGCCATGGCTAACTGCCAGGCGGCCAAAGGACAGTATGTTCACACGGGTTCTTCTGGGGCTGCTTCCACCCAGTCGCTCTTCACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616752.1
3UTR TCA 90 bp GAGCTAGGCTGGCGGGCATTGGACCCTAGTAGGTATAGCAGGCTGTaGAGAGCGACTGGGTGGAAGCAGCCCCAGAAGAACCCGTGTGAA +
Preference number: 1 (lower is better)
Translates to: ELGWRALDPSRYSRL*RATGWKQPQKNPCE
Trigger: TTCACACGGGTTCTTCTGGGGCTGCTTCCACCCAGTCGCTCTTCACAGCCTGCTATACCTACTAGGGTCCAATGCCCGCCAGCCTAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616752.1
3UTR CCA 90 bp TGTATTTCCAGCAGTTCAAATCTAATTGTGTCGAATTTCCAGGATTaGAGGAAAAGTTGCTCCCTTTCAGCCCTCCTACTAGAAGCACTG +
Preference number: 1 (lower is better)
Translates to: CISSSSNLIVSNFQD*RKSCSLSALLLEAL
Trigger: CAGTGCTTCTAGTAGGAGGGCTGAAAGGGAGCAACTTTTCCTCCAATCCTGGAAATTCGACACAATTAGATTTGAACTGCTGGAAATACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
3UTR TCA 90 bp TCAGTTCTTGGTCCTCTTATCTCCTTCCCTCTGAAGTGTTTCTGTTaGAATTGTCCTTCAGTCTCCTGTCATCAACTATACTCTAGTGTG +
Preference number: 1 (lower is better)
Translates to: SVLGPLISFPLKCFC*NCPSVSCHQLYSSV
Trigger: CACACTAGAGTATAGTTGATGACAGGAGACTGAAGGACAATTTCAACAGAAACACTTCAGAGGGAAGGAGATAAGAGGACCAAGAACTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649902.1
3UTR GCA 90 bp GTGGGTATTCTGGAGCATGGGGAGCTGAAAGTGTTGCAAGGAAACTaGTGTGTGAAATTTGATCAGGTCCTTGGTATTCATTTTTATGTT +
Preference number: 1 (lower is better)
Translates to: VGILEHGELKVLQGN*CVKFDQVLGIHFYV
Trigger: AACATAAAAATGAATACCAAGGACCTGATCAAATTTCACACAGCAGTTTCCTTGCAACACTTTCAGCTCCCCATGCTCCAGAATACCCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
3UTR TCA 90 bp TGTTTCACCAAACCTGGGCCACTTGAACAAGAATGCTCCAAGCATTaGAGTCACATTAATTCTCTTATTATACTCCACAAGTTGCTCAAA +
Preference number: 1 (lower is better)
Translates to: CFTKPGPLEQECSKH*SHINSLIILHKLLK
Trigger: TTTGAGCAACTTGTGGAGTATAATAAGAGAATTAATGTGACTTCAATGCTTGGAGCATTCTTGTTCAAGTGGCCCAGGTTTGGTGAAACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647789.2
3UTR CCA 90 bp TCTTCTTCATCTTCCCAAAATAAAAAGTATCCTAGGTTCAGTTCTTaGTCCTCTTATCTCCTTCCCTCTGAAGTGTTTCTGTTGAAATTG +
Preference number: 1 (lower is better)
Translates to: SSSSSQNKKYPRFSS*SSYLLPSEVFLLKL
Trigger: CAATTTCAACAGAAACACTTCAGAGGGAAGGAGATAAGAGGACCAAGAACTGAACCTAGGATACTTTTTATTTTGGGAAGATGAAGAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649902.1
3UTR-3UTR CCA 90 bp GAGGAAAAGTTGCTCCCTTTCAGCCCTCCTACTAGAAGCACTGGAGCTAGGCTGTGTCCTTTGGCCGCCTaGCAGTTAGCCATGGCCCGC +
Preference number: 2 (lower is better)
Translates to: EEKLLPFSPPTRSTGARLCPLAA*QLAMAR
Trigger: GCGGGCCATGGCTAACTGCCAGGCGGCCAAAGGACA...CAGCCTAGCTCCAGTGCTTCTAGTAGGAGGGCTGAAAGGGAGCAACTTTTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616752.1
3UTR-3UTR GCA 90 bp TTAGAGGATCCCAAGTCTAGGGTTTCTGATTTAATTGAGCTGGGGTGTGGCCTGGACTGTTTCATAAGATaGACTTCTCTACACTCAGCT +
Preference number: 2 (lower is better)
Translates to: LEDPKSRVSDLIELGCGLDCFIR*TSLHSA
Trigger: AGCTGAGTGTAGAGAAGTGCATCTTATGAAACAGTC...CAGGCCACACCCCAGCTCAATTAAATCAGAAACCCTAGACTTGGGATCCTCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647789.2
3UTR CAA 90 bp TTATTTTCTTGGGTGGGTATTCTGGAGCATGGGGAGCTGAAAGTGTaGCAAGGAAACTGCTGTGTGAAATTTGATCAGGTCCTTGGTATT +
Preference number: 2 (lower is better)
Translates to: LFSWVGILEHGELKV*QGNCCVKFDQVLGI
Trigger: AATACCAAGGACCTGATCAAATTTCACACAGCAGTTTCCTTGCAACACTTTCAGCTCCCCATGCTCCAGAATACCCACCCAAGAAAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647789.2
ENST00000648064.1
3UTR CAA 90 bp TTGTATTTCCAGCAGTTCAAATCTAATTGTGTCGAATTTCCAGGATaGGAGGAAAAGTTGCTCCCTTTCAGCCCTCCTACTAGAAGCACT +
Preference number: 2 (lower is better)
Translates to: LYFQQFKSNCVEFPG*EEKLLPFSPPTRST
Trigger: AGTGCTTCTAGTAGGAGGGCTGAAAGGGAGCAACTTTTCCTCCAATCCTGGAAATTCGACACAATTAGATTTGAACTGCTGGAAATACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
3UTR-3UTR GCA 90 bp AATGCTTGGTTCACCCTACAATATAATCGCTGCTTTTCTTGGTTGCTTCTCTTCCATACTGACCTCTACTaGCACATTTTCAAATGCCTA +
Preference number: 2 (lower is better)
Translates to: NAWFTLQYNRCFSWLLLFHTDLY*HIFKCL
Trigger: TAGGCATTTGAAAATGTGGCAGTAGAGGTCAGTATG...GAAGAGAAGCAACCAAGAAAAGCAGCGATTATATTGTAGGGTGAACCAAGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649902.1
3UTR-3UTR GCA 90 bp AGTGTTTCTGTTGAAATTGTCCTTCAGTCTCCTGTCATCAACTATACTCTAGTGTGCCACATTTTCAAATaGCTAATAGACACTATCGGT +
Preference number: 2 (lower is better)
Translates to: SVSVEIVLQSPVINYTLVCHIFK*LIDTIG
Trigger: ACCGATAGTGTCTATTAGGCATTTGAAAATGTGGCA...CACTAGAGTATAGTTGATGACAGGAGACTGAAGGACAATTTCAACAGAAACACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649902.1
3UTR TCA 72 bp AGCGACTGGGTGGAAGCAGCCCCAGAAGAACCCGTGTaGACATACTGTCCTTTGGCCGCCTGGCAGTTAGCC +
Preference number: 3 (lower is better)
Translates to: SDWVEAAPEEPV*TYCPLAAWQLA
Trigger: GGCTAACTGCCAGGCGGCCAAAGGACAGTATGTTCACACGGGTTCTTCTGGGGCTGCTTCCACCCAGTCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616752.1
3UTR CCA 72 bp CTTTCAGCCCTCCTACTAGAAGCACTGGAGCTAGGCTaGCGGGCATTGGACCCTAGTAGGTATAGCAGGCTG +
Preference number: 3 (lower is better)
Translates to: LSALLLEALELG*RALDPSRYSRL
Trigger: CAGCCTGCTATACCTACTAGGGTCCAATGCCCGCCAGCCTAGCTCCAGTGCTTCTAGTAGGAGGGCTGAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616752.1
3UTR-3UTR CAA 90 bp GTGGGTATTCTGGAGCATGGGGAGCTGAAAGTGTTGCAAGGAAACTGCTGTGTGAAGCCTATTATTTTCTaGGGTGGGTATTCTGGAGCA +
Preference number: 3 (lower is better)
Translates to: VGILEHGELKVLQGNCCVKPIIF*GGYSGA
Trigger: TGCTCCAGAATACCCACCCAAGAAAATAATAGGCTT...CACACAGCAGTTTCCTTGCAACACTTTCAGCTCCCCATGCTCCAGAATACCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647789.2
ENST00000648064.1
3UTR-3UTR CAA 90 bp ACTTCTCTACACTCAGCTAATGAGGTGTTTCAATCAGCAGTTGTTCTTTGGATGGGATTGGAGGAAAAGTaGCTCCCTTTCAGCCCTCCT +
Preference number: 3 (lower is better)
Translates to: TSLHSANEVFQSAVVLWMGLEEK*LPFSPP
Trigger: AGGAGGGCTGAAAGGGAGCAACTTTTCCTCCAATCC...CATCCAAAGAACAACTGCTGATTGAAACACCTCATTAGCTGAGTGTAGAGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647789.2
ENST00000648064.1
3UTR-3UTR CAA 90 bp CCCAACCTACCACTGCTAAGACTGTTTCATAAGATGCACTTCTCTACACTCAGCATCAGCAGTTGTTCTTaGGATGAGGAGCCGATATTG +
Preference number: 3 (lower is better)
Translates to: PNLPLLRLFHKMHFSTLSISSCS*DEEPIL
Trigger: CAATATCGGCTCCTCATCCAAAGAACAACTGCTGAT...GCTGAGTGTAGAGAAGTGCATCTTATGAAACAGTCTTAGCAGTGGTAGGTTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647789.2
3UTR GCA 72 bp CTGGAGCATGGGGAGCTGAAAGTGTTGCAAGGAAACTaGTGTGTGAAATTTGATCAGGTCCTTGGTATTCAT +
Preference number: 3 (lower is better)
Translates to: LEHGELKVLQGN*CVKFDQVLGIH
Trigger: ATGAATACCAAGGACCTGATCAAATTTCACACAGCAGTTTCCTTGCAACACTTTCAGCTCCCCATGCTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
3UTR GCA 72 bp CTATCGGTAGATACCTTCTTGGCCCAAAGAAAACAATaGTTCTCCGTGTTGGAAAGTCAAGCCCCAAATGTG +
Preference number: 3 (lower is better)
Translates to: LSVDTFLAQRKQ*FSVLESQAPNV
Trigger: CACATTTGGGGCTTGACTTTCCAACACGGAGAAGCATTGTTTTCTTTGGGCCAAGAAGGTATCTACCGATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649902.1
3UTR CCA 72 bp AAGCCTATTATTTTCTTGGGTGGGTATTCTGGAGCATaGGGAGCTGAAAGTGTTGCAAGGAAACTGCTGTGT +
Preference number: 3 (lower is better)
Translates to: KPIIFLGGYSGA*GAESVARKLLC
Trigger: ACACAGCAGTTTCCTTGCAACACTTTCAGCTCCCCATGCTCCAGAATACCCACCCAAGAAAATAATAGGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647789.2
ENST00000648064.1
3UTR-3UTR CAA 90 bp GGCCACTTGAACAAGAATGCTCCAAGCATTGAAGTCACATTAATTCTCTTATTAGGGGAGCTGAAAGTGTaGCAAGGAAACTGCTGTGTG +
Preference number: 3 (lower is better)
Translates to: GHLNKNAPSIEVTLILLLGELKV*QGNCCV
Trigger: CACACAGCAGTTTCCTTGCAACACTTTCAGCTCCCC...TAATAAGAGAATTAATGTGACTTCAATGCTTGGAGCATTCTTGTTCAAGTGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647789.2
3UTR TCA 72 bp GGTCCTCTTATCTCCTTCCCTCTGAAGTGTTTCTGTTaGAATTGTCCTTCAGTCTCCTGTCATCAACTATAC +
Preference number: 3 (lower is better)
Translates to: GPLISFPLKCFC*NCPSVSCHQLY
Trigger: GTATAGTTGATGACAGGAGACTGAAGGACAATTTCAACAGAAACACTTCAGAGGGAAGGAGATAAGAGGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649902.1
3UTR CCA 72 bp AGCAGTTCAAATCTAATTGTGTCGAATTTCCAGGATTaGAGGAAAAGTTGCTCCCTTTCAGCCCTCCTACTA +
Preference number: 3 (lower is better)
Translates to: SSSNLIVSNFQD*RKSCSLSALLL
Trigger: TAGTAGGAGGGCTGAAAGGGAGCAACTTTTCCTCCAATCCTGGAAATTCGACACAATTAGATTTGAACTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
3UTR-3UTR CAA 90 bp AGTGTTTCTGTTGAAATTGTCCTTCAGTCTCCTGTCATCAACTATACTCTAGTGCAATGCTTCTCCGTGTaGGAAAGTCAAGCCCCAAAT +
Preference number: 3 (lower is better)
Translates to: SVSVEIVLQSPVINYTLVQCFSV*ESQAPN
Trigger: ATTTGGGGCTTGACTTTCCAACACGGAGAAGCATTG...CACTAGAGTATAGTTGATGACAGGAGACTGAAGGACAATTTCAACAGAAACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649902.1
3UTR-3UTR CAA 90 bp CAGAATGCTTGGTTCACCCTACAATATAATCGCTGCTTTTCTTGGTTGCTTCTCTCTGAAGTGTTTCTGTaGAAATTGTCCTTCAGTCTC +
Preference number: 3 (lower is better)
Translates to: QNAWFTLQYNRCFSWLLLSEVFL*KLSFSL
Trigger: GAGACTGAAGGACAATTTCAACAGAAACACTTCAGA...GAGAAGCAACCAAGAAAAGCAGCGATTATATTGTAGGGTGAACCAAGCATTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649902.1
3UTR TCA 72 bp GTCATGTCTAGTAGAGTCAAAAGTAATGAAATACACTaGGTCTTTGGACAGCAAGAGCAGAAAAGTGAAACC +
Preference number: 3 (lower is better)
Translates to: VMSSRVKSNEIH*VFGQQEQKSET
Trigger: GGTTTCACTTTTCTGCTCTTGCTGTCCAAAGACTCAGTGTATTTCATTACTTTTGACTCTACTAGACATGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647789.2
3UTR-3UTR CAA 90 bp GGCCACTTGAACAAGAATGCTCCAAGCATTGAAGTCACATTAATTCTCTTATTAAAATACACTGAGTCTTaGGACAGCAAGAGCAGAAAA +
Preference number: 3 (lower is better)
Translates to: GHLNKNAPSIEVTLILLLKYTES*DSKSRK
Trigger: TTTTCTGCTCTTGCTGTCCAAAGACTCAGTGTATTT...TAATAAGAGAATTAATGTGACTTCAATGCTTGGAGCATTCTTGTTCAAGTGGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647789.2
3UTR CCA 72 bp TCAGCTAATGAGGTGTTTCAATCAGCAGTTGTTCTTTaGATGAGGAGCCGATATTGTTTTAAAGCCTATTAT +
Preference number: 3 (lower is better)
Translates to: SANEVFQSAVVL*MRSRYCFKAYY
Trigger: ATAATAGGCTTTAAAACAATATCGGCTCCTCATCCAAAGAACAACTGCTGATTGAAACACCTCATTAGCTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647789.2
ENST00000648064.1
3UTR TCA 72 bp CTAATGAGGTGTTTCAATCAGCAGTTGTTCTTTGGATaGGGAGCCGATATTGTTTTAAAGCCTATTATTTTC +
Preference number: 3 (lower is better)
Translates to: LMRCFNQQLFFG*GADIVLKPIIF
Trigger: GAAAATAATAGGCTTTAAAACAATATCGGCTCCTCATCCAAAGAACAACTGCTGATTGAAACACCTCATTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647789.2
ENST00000648064.1
CDS-3UTR CCA 90 bp CCTTTCAGCCCTCCTACTAGAAGCACTGGAGCTAGGCTGGCGGGCATTGGACCCCTCCTGGGTGAGGGCTaGAAATCGGTGGGCCATGGT +
Preference number: 4 (lower is better)
Translates to: PFSPPTRSTGARLAGIGPLLGEG*KSVGHG
Trigger: ACCATGGCCCACCGATTTCCAGCCCTCACCCAGGAG...GGGTCCAATGCCCGCCAGCCTAGCTCCAGTGCTTCTAGTAGGAGGGCTGAAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616752.1
CDS-3UTR TCA 90 bp GCCCTCCTACTAGAAGCACTGGAGCTAGGCTGGCGGGCATTGGACCCTAGTAGGCAGTGTTTTCCACCTTaGTCCTCTGCAGGCGGTTCC +
Preference number: 4 (lower is better)
Translates to: ALLLEALELGWRALDPSRQCFPP*SSAGGS
Trigger: GGAACCGCCTGCAGAGGATCAAGGTGGAAAACACTG...CCTACTAGGGTCCAATGCCCGCCAGCCTAGCTCCAGTGCTTCTAGTAGGAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616752.1
CDS-3UTR GCA 90 bp GCCCTCCTACTAGAAGCACTGGAGCTAGGCTGGCGGGCATTGGACCCTAGTAGGGATGCCAGGAACAGCTaGAGGAACAGTACGGTGGAG +
Preference number: 4 (lower is better)
Translates to: ALLLEALELGWRALDPSRDARNS*RNSTVE
Trigger: CTCCACCGTACTGTTCCTGCAGCTGTTCCTGGCATC...CCTACTAGGGTCCAATGCCCGCCAGCCTAGCTCCAGTGCTTCTAGTAGGAGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616752.1
CDS-3UTR CCA 90 bp TCCCTTTCAGCCCTCCTACTAGAAGCACTGGAGCTAGGCTGGCGGGCATTGGACAGGGCTGGAAATCGGTaGGCCATGGTGACAGGTAGT +
Preference number: 4 (lower is better)
Translates to: SLSALLLEALELGWRALDRAGNR*AMVTGS
Trigger: ACTACCTGTCACCATGGCCCACCGATTTCCAGCCCT...GTCCAATGCCCGCCAGCCTAGCTCCAGTGCTTCTAGTAGGAGGGCTGAAAGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616752.1
ENST00000647789.2
CDS-3UTR CCA 90 bp CCTTTCAGCCCTCCTACTAGAAGCACTGGAGCTAGGCTGGCGGGCATTGGACCCGCAGGCGGTTCCCCATaGTACCTACAGATTCATCTG +
Preference number: 4 (lower is better)
Translates to: PFSPPTRSTGARLAGIGPAGGSP*YLQIHL
Trigger: CAGATGAATCTGTAGGTACCATGGGGAACCGCCTGC...GGGTCCAATGCCCGCCAGCCTAGCTCCAGTGCTTCTAGTAGGAGGGCTGAAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616752.1
CDS-3UTR CCA 90 bp TCCCTTTCAGCCCTCCTACTAGAAGCACTGGAGCTAGGCTGGCGGGCATTGGACAGGCTGGATGGACACTaGTCGGCAATCCTCAGCACA +
Preference number: 4 (lower is better)
Translates to: SLSALLLEALELGWRALDRLDGH*SAILST
Trigger: TGTGCTGAGGATTGCCGACCAGTGTCCATCCAGCCT...GTCCAATGCCCGCCAGCCTAGCTCCAGTGCTTCTAGTAGGAGGGCTGAAAGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR CCA 90 bp TCCCTTTCAGCCCTCCTACTAGAAGCACTGGAGCTAGGCTGGCGGGCATTGGACGATAGCGAGGCTGGATaGACACTGGTCGGCAATCCT +
Preference number: 4 (lower is better)
Translates to: SLSALLLEALELGWRALDDSEAG*TLVGNP
Trigger: AGGATTGCCGACCAGTGTCCATCCAGCCTCGCTATC...GTCCAATGCCCGCCAGCCTAGCTCCAGTGCTTCTAGTAGGAGGGCTGAAAGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR CCA 90 bp TTGGAGGAAAAGTTGCTCCCTTTCAGCCCTCCTACTAGAAGCACTGGAGCTAGGAGGCAGCCAGTGCACTaGCCTGCAGGGCCCGTCCAT +
Preference number: 4 (lower is better)
Translates to: LEEKLLPFSPPTRSTGARRQPVH*PAGPVH
Trigger: ATGGACGGGCCCTGCAGGCCAGTGCACTGGCTGCCT...CCTAGCTCCAGTGCTTCTAGTAGGAGGGCTGAAAGGGAGCAACTTTTCCTCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR CCA 90 bp AGTTGCTCCCTTTCAGCCCTCCTACTAGAAGCACTGGAGCTAGGCTGGCGGGCAACACCCCCGATGCTCTaGTTGATGGAACTGTCCACA +
Preference number: 4 (lower is better)
Translates to: SCSLSALLLEALELGWRATPPML*LMELST
Trigger: TGTGGACAGTTCCATCAACCAGAGCATCGGGGGTGT...TGCCCGCCAGCCTAGCTCCAGTGCTTCTAGTAGGAGGGCTGAAAGGGAGCAACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR CCA 90 bp GAGGAAAAGTTGCTCCCTTTCAGCCCTCCTACTAGAAGCACTGGAGCTAGGCTGGGATTCTGGAGGCGGTaGGAGCCAACACTTGCTGCG +
Preference number: 4 (lower is better)
Translates to: EEKLLPFSPPTRSTGARLGFWRR*EPTLAA
Trigger: CGCAGCAAGTGTTGGCTCCCACCGCCTCCAGAATCC...CAGCCTAGCTCCAGTGCTTCTAGTAGGAGGGCTGAAAGGGAGCAACTTTTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648064.1
CDS-3UTR TCA 90 bp GGTGGAAGCAGCCCCAGAAGAACCCGTGTGAACATACTGTCCTTTGGCCGCCTGATCAAAAGCTGTGGGTaGGGCAGCAGCTGCCAAATA +
Preference number: 4 (lower is better)
Translates to: GGSSPRRTRVNILSFGRLIKSCG*GSSCQI
Trigger: TATTTGGCAGCTGCTGCCTCACCCACAGCTTTTGAT...CAGGCGGCCAAAGGACAGTATGTTCACACGGGTTCTTCTGGGGCTGCTTCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616752.1
CDS-3UTR TCA 90 bp GTGGGTATTCTGGAGCATGGGGAGCTGAAAGTGTTGCAAGGAAACTGCTGTGTGCTGAGCACAGCGCTCTaGGAGGCCATCAAGCCCTTG +
Preference number: 4 (lower is better)
Translates to: VGILEHGELKVLQGNCCVLSTAL*EAIKPL
Trigger: CAAGGGCTTGATGGCCTCTCAGAGCGCTGTGCTCAG...CACACAGCAGTTTCCTTGCAACACTTTCAGCTCCCCATGCTCCAGAATACCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
CDS-3UTR TCA 90 bp AAGTTGCTCCCTTTCAGCCCTCCTACTAGAAGCACTGGAGCTAGGCTGGCGGGCTGGAGCATGGGGAGCTaGAAGTGTTGCAAGGAAACT +
Preference number: 4 (lower is better)
Translates to: KLLPFSPPTRSTGARLAGWSMGS*KCCKET
Trigger: AGTTTCCTTGCAACACTTTCAGCTCCCCATGCTCCA...GCCCGCCAGCCTAGCTCCAGTGCTTCTAGTAGGAGGGCTGAAAGGGAGCAACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
CDS-3UTR CCA 90 bp GTGGGTATTCTGGAGCATGGGGAGCTGAAAGTGTTGCAAGGAAACTGCTGTGTGTCTGCTGACAGATGCTaGCGTAGCGAGCCAGGGCGT +
Preference number: 4 (lower is better)
Translates to: VGILEHGELKVLQGNCCVSADRC*RSEPGR
Trigger: ACGCCCTGGCTCGCTACGCCAGCATCTGTCAGCAGA...CACACAGCAGTTTCCTTGCAACACTTTCAGCTCCCCATGCTCCAGAATACCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
CDS-3UTR CCA 90 bp TTGGAGGAAAAGTTGCTCCCTTTCAGCCCTCCTACTAGAAGCACTGGAGCTAGGTCTGCTGACAGATGCTaGCGTAGCGAGCCAGGGCGT +
Preference number: 4 (lower is better)
Translates to: LEEKLLPFSPPTRSTGARSADRC*RSEPGR
Trigger: ACGCCCTGGCTCGCTACGCCAGCATCTGTCAGCAGA...CCTAGCTCCAGTGCTTCTAGTAGGAGGGCTGAAAGGGAGCAACTTTTCCTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR CCA 90 bp AGTTGCTCCCTTTCAGCCCTCCTACTAGAAGCACTGGAGCTAGGCTGGCGGGCACTGGAGTATACTTCTTaGTGCAGGCATGTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: SCSLSALLLEALELGWRALEYTS*CRHVQQ
Trigger: CTGCTGGACATGCCTGCACCAAGAAGTATACTCCAG...TGCCCGCCAGCCTAGCTCCAGTGCTTCTAGTAGGAGGGCTGAAAGGGAGCAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR CCA 90 bp CCAGGATTGGAGGAAAAGTTGCTCCCTTTCAGCCCTCCTACTAGAAGCACTGGAGCACTGGAGCTAGGCTaGCGGGCATTGGACCCTAGT +
Preference number: 4 (lower is better)
Translates to: PGLEEKLLPFSPPTRSTGALELG*RALDPS
Trigger: ACTAGGGTCCAATGCCCGCCAGCCTAGCTCCAGTGC...TCCAGTGCTTCTAGTAGGAGGGCTGAAAGGGAGCAACTTTTCCTCCAATCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR CCA 90 bp TCAGCCCTCCTACTAGAAGCACTGGAGCTAGGCTGGCGGGCATTGGACCCTAGTGGGTATTCTGGAGCATaGGGAGCTGAAAGTGTTGCA +
Preference number: 4 (lower is better)
Translates to: SALLLEALELGWRALDPSGYSGA*GAESVA
Trigger: TGCAACACTTTCAGCTCCCCATGCTCCAGAATACCC...ACTAGGGTCCAATGCCCGCCAGCCTAGCTCCAGTGCTTCTAGTAGGAGGGCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616752.1
CDS-3UTR CCA 90 bp TCCCTTTCAGCCCTCCTACTAGAAGCACTGGAGCTAGGCTGGCGGGCATTGGACGGGTATTCTGGAGCATaGGGAGCTGAAAGTGTTGCA +
Preference number: 4 (lower is better)
Translates to: SLSALLLEALELGWRALDGYSGA*GAESVA
Trigger: TGCAACACTTTCAGCTCCCCATGCTCCAGAATACCC...GTCCAATGCCCGCCAGCCTAGCTCCAGTGCTTCTAGTAGGAGGGCTGAAAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
CDS-3UTR CCA 90 bp AAGTTGCTCCCTTTCAGCCCTCCTACTAGAAGCACTGGAGCTAGGCTGGCGGGCGGGTATTCTGGAGCATaGGGAGCTGAAAGTGTTGCA +
Preference number: 4 (lower is better)
Translates to: KLLPFSPPTRSTGARLAGGYSGA*GAESVA
Trigger: TGCAACACTTTCAGCTCCCCATGCTCCAGAATACCC...GCCCGCCAGCCTAGCTCCAGTGCTTCTAGTAGGAGGGCTGAAAGGGAGCAACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
CDS-3UTR TCA 90 bp GAGGAAAAGTTGCTCCCTTTCAGCCCTCCTACTAGAAGCACTGGAGCTAGGCTGATCGGTGGGCCATGGTaGCAGGTAGTTTGGGAGAGA +
Preference number: 4 (lower is better)
Translates to: EEKLLPFSPPTRSTGARLIGGPW*QVVWER
Trigger: TCTCTCCCAAACTACCTGTCACCATGGCCCACCGAT...CAGCCTAGCTCCAGTGCTTCTAGTAGGAGGGCTGAAAGGGAGCAACTTTTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616752.1
ENST00000647789.2
CDS-3UTR GCA 90 bp TCTTGGGTGGGTATTCTGGAGCATGGGGAGCTGAAAGTGTTGCAAGGAAACTGCCATTCTGCTGACAGATaGTGGCGTAGCGAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: SWVGILEHGELKVLQGNCHSADR*WRSEPG
Trigger: CCCTGGCTCGCTACGCCAGCATCTGTCAGCAGAATG...GCAGTTTCCTTGCAACACTTTCAGCTCCCCATGCTCCAGAATACCCACCCAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647789.2
ENST00000648064.1
CDS-3UTR GCA 90 bp TCCCTTTCAGCCCTCCTACTAGAAGCACTGGAGCTAGGCTGGCGGGCATTGGACGAGTATACTTCTTGGTaGAGGCATGTCCAGCAGTCA +
Preference number: 4 (lower is better)
Translates to: SLSALLLEALELGWRALDEYTSW*RHVQQS
Trigger: TGACTGCTGGACATGCCTGCACCAAGAAGTATACTC...GTCCAATGCCCGCCAGCCTAGCTCCAGTGCTTCTAGTAGGAGGGCTGAAAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR GCA 90 bp AGGAAAAGTTGCTCCCTTTCAGCCCTCCTACTAGAAGCACTGGAGCTAGGCTGGGATGCCAGGAACAGCTaGAGGAACAGTACGGTGGAG +
Preference number: 4 (lower is better)
Translates to: RKSCSLSALLLEALELGWDARNS*RNSTVE
Trigger: CTCCACCGTACTGTTCCTGCAGCTGTTCCTGGCATC...CCAGCCTAGCTCCAGTGCTTCTAGTAGGAGGGCTGAAAGGGAGCAACTTTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR GCA 90 bp TCCCTTTCAGCCCTCCTACTAGAAGCACTGGAGCTAGGCTGGCGGGCATTGGACCAGACAAAAAGCAGATaGCAGGAACAGCTGCAGGAA +
Preference number: 4 (lower is better)
Translates to: SLSALLLEALELGWRALDQTKSR*QEQLQE
Trigger: TTCCTGCAGCTGTTCCTGGCATCTGCTTTTTGTCTG...GTCCAATGCCCGCCAGCCTAGCTCCAGTGCTTCTAGTAGGAGGGCTGAAAGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR CCA 90 bp AGGAAAAGTTGCTCCCTTTCAGCCCTCCTACTAGAAGCACTGGAGCTAGGCTGGGATAGCGAGGCTGGATaGACACTGGTCGGCAATCCT +
Preference number: 4 (lower is better)
Translates to: RKSCSLSALLLEALELGWDSEAG*TLVGNP
Trigger: AGGATTGCCGACCAGTGTCCATCCAGCCTCGCTATC...CCAGCCTAGCTCCAGTGCTTCTAGTAGGAGGGCTGAAAGGGAGCAACTTTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR CCA 90 bp ATTGTGTCGAATTTCCAGGATTGGAGGAAAAGTTGCTCCCTTTCAGCCCTCCTAAGGCAGCCAGTGCACTaGCCTGCAGGGCCCGTCCAT +
Preference number: 4 (lower is better)
Translates to: IVSNFQDWRKSCSLSALLRQPVH*PAGPVH
Trigger: ATGGACGGGCCCTGCAGGCCAGTGCACTGGCTGCCT...TAGGAGGGCTGAAAGGGAGCAACTTTTCCTCCAATCCTGGAAATTCGACACAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR TCA 90 bp GTGGGTATTCTGGAGCATGGGGAGCTGAAAGTGTTGCAAGGAAACTGCTGTGTGCCCCGATGCTCTGGTTaGTGGAACTGTCCACAGAGA +
Preference number: 4 (lower is better)
Translates to: VGILEHGELKVLQGNCCVPRCSG*WNCPQR
Trigger: TCTCTGTGGACAGTTCCATCAACCAGAGCATCGGGG...CACACAGCAGTTTCCTTGCAACACTTTCAGCTCCCCATGCTCCAGAATACCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
CDS-3UTR TCA 90 bp CCAGGATTGGAGGAAAAGTTGCTCCCTTTCAGCCCTCCTACTAGAAGCACTGGACCCCGATGCTCTGGTTaGTGGAACTGTCCACAGAGA +
Preference number: 4 (lower is better)
Translates to: PGLEEKLLPFSPPTRSTGPRCSG*WNCPQR
Trigger: TCTCTGTGGACAGTTCCATCAACCAGAGCATCGGGG...TCCAGTGCTTCTAGTAGGAGGGCTGAAAGGGAGCAACTTTTCCTCCAATCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR TCA 90 bp TCTTGGGTGGGTATTCTGGAGCATGGGGAGCTGAAAGTGTTGCAAGGAAACTGCAGGTATAGCAGGCTGTaGAGAGCGACTGGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: SWVGILEHGELKVLQGNCRYSRL*RATGWK
Trigger: CTTCCACCCAGTCGCTCTTCACAGCCTGCTATACCT...GCAGTTTCCTTGCAACACTTTCAGCTCCCCATGCTCCAGAATACCCACCCAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647789.2
ENST00000648064.1
CDS-3UTR TCA 90 bp ATTGTGTCGAATTTCCAGGATTGGAGGAAAAGTTGCTCCCTTTCAGCCCTCCTAGGCAGCGGTGTCCAGTaGGTTGGATTCTGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: IVSNFQDWRKSCSLSALLGSGVQ*VGFWRR
Trigger: CCGCCTCCAGAATCCAACTCACTGGACACCGCTGCC...TAGGAGGGCTGAAAGGGAGCAACTTTTCCTCCAATCCTGGAAATTCGACACAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648064.1
CDS-3UTR GCA 90 bp CCCAGAAGAACCCGTGTGAACATACTGTCCTTTGGCCGCCTGGCAGTTAGCCATACCTACAGATTCATCTaGAGCCAGGATCCCCTTTCC +
Preference number: 4 (lower is better)
Translates to: PRRTRVNILSFGRLAVSHTYRFI*SQDPLS
Trigger: GGAAAGGGGATCCTGGCTGCAGATGAATCTGTAGGT...ATGGCTAACTGCCAGGCGGCCAAAGGACAGTATGTTCACACGGGTTCTTCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616752.1
CDS-3UTR GCA 90 bp TTGGAGGAAAAGTTGCTCCCTTTCAGCCCTCCTACTAGAAGCACTGGAGCTAGGTCCACCTTGATCCTCTaGAGGCGGTTCCCCATGGTA +
Preference number: 4 (lower is better)
Translates to: LEEKLLPFSPPTRSTGARSTLIL*RRFPMV
Trigger: TACCATGGGGAACCGCCTGCAGAGGATCAAGGTGGA...CCTAGCTCCAGTGCTTCTAGTAGGAGGGCTGAAAGGGAGCAACTTTTCCTCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR CCA 90 bp TATTCTGGAGCATGGGGAGCTGAAAGTGTTGCAAGGAAACTGCTGTGTGAAATTAGGCAGCCAGTGCACTaGCCTGCAGGGCCCGTCCAT +
Preference number: 4 (lower is better)
Translates to: YSGAWGAESVARKLLCEIRQPVH*PAGPVH
Trigger: ATGGACGGGCCCTGCAGGCCAGTGCACTGGCTGCCT...AATTTCACACAGCAGTTTCCTTGCAACACTTTCAGCTCCCCATGCTCCAGAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647789.2
ENST00000648064.1
CDS-3UTR TCA 90 bp CCTATTATTTTCTTGGGTGGGTATTCTGGAGCATGGGGAGCTGAAAGTGTTGCACTGAGCACAGCGCTCTaGGAGGCCATCAAGCCCTTG +
Preference number: 4 (lower is better)
Translates to: PIIFLGGYSGAWGAESVALSTAL*EAIKPL
Trigger: CAAGGGCTTGATGGCCTCTCAGAGCGCTGTGCTCAG...TGCAACACTTTCAGCTCCCCATGCTCCAGAATACCCACCCAAGAAAATAATAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647789.2
ENST00000648064.1
CDS-3UTR TCA 90 bp TCAGCCCTCCTACTAGAAGCACTGGAGCTAGGCTGGCGGGCATTGGACCCTAGTCTGCTGTGTGAAATTTaGTCAGGTCCTTGGTATTCA +
Preference number: 4 (lower is better)
Translates to: SALLLEALELGWRALDPSLLCEI*SGPWYS
Trigger: TGAATACCAAGGACCTGATCAAATTTCACACAGCAG...ACTAGGGTCCAATGCCCGCCAGCCTAGCTCCAGTGCTTCTAGTAGGAGGGCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616752.1
CDS-3UTR TCA 90 bp TCAGCCCTCCTACTAGAAGCACTGGAGCTAGGCTGGCGGGCATTGGACCCTAGTAAGGAAACTGCTGTGTaGAATTTGATCAGGTCCTTG +
Preference number: 4 (lower is better)
Translates to: SALLLEALELGWRALDPSKETAV*NLIRSL
Trigger: CAAGGACCTGATCAAATTTCACACAGCAGTTTCCTT...ACTAGGGTCCAATGCCCGCCAGCCTAGCTCCAGTGCTTCTAGTAGGAGGGCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616752.1
CDS-3UTR GCA 90 bp AAGTTGCTCCCTTTCAGCCCTCCTACTAGAAGCACTGGAGCTAGGCTGGCGGGCTTCCATTGGCAACAATaGTCTGGGCAATTTCTGAGA +
Preference number: 4 (lower is better)
Translates to: KLLPFSPPTRSTGARLAGFHWQQ*SGQFLR
Trigger: TCTCAGAAATTGCCCAGAGCATTGTTGCCAATGGAA...GCCCGCCAGCCTAGCTCCAGTGCTTCTAGTAGGAGGGCTGAAAGGGAGCAACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR GCA 90 bp AGGAAAAGTTGCTCCCTTTCAGCCCTCCTACTAGAAGCACTGGAGCTAGGCTGGACCTACAGATTCATCTaGAGCCAGGATCCCCTTTCC +
Preference number: 4 (lower is better)
Translates to: RKSCSLSALLLEALELGWTYRFI*SQDPLS
Trigger: GGAAAGGGGATCCTGGCTGCAGATGAATCTGTAGGT...CCAGCCTAGCTCCAGTGCTTCTAGTAGGAGGGCTGAAAGGGAGCAACTTTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR GCA 90 bp ATTGTGTCGAATTTCCAGGATTGGAGGAAAAGTTGCTCCCTTTCAGCCCTCCTACCTTGTTTGCAGCCTTaGCACCCCAGGCAGCCAGTG +
Preference number: 4 (lower is better)
Translates to: IVSNFQDWRKSCSLSALLPCLQP*HPRQPV
Trigger: CACTGGCTGCCTGGGGTGGCAAGGCTGCAAACAAGG...TAGGAGGGCTGAAAGGGAGCAACTTTTCCTCCAATCCTGGAAATTCGACACAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR GCA 90 bp CCTATTATTTTCTTGGGTGGGTATTCTGGAGCATGGGGAGCTGAAAGTGTTGCAGGTTGCCTCCTTGTTTaGAGCCTTGCCACCCCAGGC +
Preference number: 4 (lower is better)
Translates to: PIIFLGGYSGAWGAESVAGCLLV*SLATPG
Trigger: GCCTGGGGTGGCAAGGCTGCAAACAAGGAGGCAACC...TGCAACACTTTCAGCTCCCCATGCTCCAGAATACCCACCCAAGAAAATAATAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000647789.2
ENST00000648064.1
CDS-3UTR CCA 90 bp GCCCTCCTACTAGAAGCACTGGAGCTAGGCTGGCGGGCATTGGACCCTAGTAGGATCAGGAATTACCTCTaGTTCAACAATAGGTACCAG +
Preference number: 4 (lower is better)
Translates to: ALLLEALELGWRALDPSRIRNYL*FNNRYQ
Trigger: CTGGTACCTATTGTTGAACCAGAGGTAATTCCTGAT...CCTACTAGGGTCCAATGCCCGCCAGCCTAGCTCCAGTGCTTCTAGTAGGAGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616752.1
CDS-3UTR CCA 90 bp AGGAAAAGTTGCTCCCTTTCAGCCCTCCTACTAGAAGCACTGGAGCTAGGCTGGAGAGGAGCACCTCCTTaGTCTAACTTGATTCCCACC +
Preference number: 4 (lower is better)
Translates to: RKSCSLSALLLEALELGWRGAPP*SNLIPT
Trigger: GGTGGGAATCAAGTTAGACCAAGGAGGTGCTCCTCT...CCAGCCTAGCTCCAGTGCTTCTAGTAGGAGGGCTGAAAGGGAGCAACTTTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR GCA 90 bp CCCAGAAGAACCCGTGTGAACATACTGTCCTTTGGCCGCCTGGCAGTTAGCCATTTCTTTGTTTGTTCCTaGAAGAGGAGCACCTCCTTG +
Preference number: 4 (lower is better)
Translates to: PRRTRVNILSFGRLAVSHFFVCS*KRSTSL
Trigger: CAAGGAGGTGCTCCTCTTGCAGGAACAAACAAAGAA...ATGGCTAACTGCCAGGCGGCCAAAGGACAGTATGTTCACACGGGTTCTTCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616752.1
CDS-3UTR GCA 90 bp CCAGGATTGGAGGAAAAGTTGCTCCCTTTCAGCCCTCCTACTAGAAGCACTGGATGGGCTTTAGCAGGGTaGCCTCCAGGTAAACATGAT +
Preference number: 4 (lower is better)
Translates to: PGLEEKLLPFSPPTRSTGWALAG*PPGKHD
Trigger: ATCATGTTTACCTGGAGGGCACCCTGCTAAAGCCCA...TCCAGTGCTTCTAGTAGGAGGGCTGAAAGGGAGCAACTTTTCCTCCAATCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR GCA 90 bp AGGAAAAGTTGCTCCCTTTCAGCCCTCCTACTAGAAGCACTGGAGCTAGGCTGGCAGACAAAAAGCAGATaGCAGGAACAGCTGCAGGAA +
Preference number: 4 (lower is better)
Translates to: RKSCSLSALLLEALELGWQTKSR*QEQLQE
Trigger: TTCCTGCAGCTGTTCCTGGCATCTGCTTTTTGTCTG...CCAGCCTAGCTCCAGTGCTTCTAGTAGGAGGGCTGAAAGGGAGCAACTTTTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR GCA 90 bp CTATTATTTTCTTGGGTGGGTATTCTGGAGCATGGGGAGCTGAAAGTGTTGCAACCTTGTTTGCAGCCTTaGCACCCCAGGCAGCCAGTG +
Preference number: 4 (lower is better)
Translates to: LLFSWVGILEHGELKVLQPCLQP*HPRQPV
Trigger: CACTGGCTGCCTGGGGTGGCAAGGCTGCAAACAAGG...TTGCAACACTTTCAGCTCCCCATGCTCCAGAATACCCACCCAAGAAAATAATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000647789.2
ENST00000648064.1
CDS-3UTR CCA 90 bp TATTCTGGAGCATGGGGAGCTGAAAGTGTTGCAAGGAAACTGCTGTGTGAAATTCTCCTGGGTGAGGGCTaGAAATCGGTGGGCCATGGT +
Preference number: 4 (lower is better)
Translates to: YSGAWGAESVARKLLCEILLGEG*KSVGHG
Trigger: ACCATGGCCCACCGATTTCCAGCCCTCACCCAGGAG...AATTTCACACAGCAGTTTCCTTGCAACACTTTCAGCTCCCCATGCTCCAGAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
CDS-3UTR CCA 90 bp GGATTGGAGGAAAAGTTGCTCCCTTTCAGCCCTCCTACTAGAAGCACTGGAGCTAGAGGAGCACCTCCTTaGTCTAACTTGATTCCCACC +
Preference number: 4 (lower is better)
Translates to: GLEEKLLPFSPPTRSTGARGAPP*SNLIPT
Trigger: GGTGGGAATCAAGTTAGACCAAGGAGGTGCTCCTCT...AGCTCCAGTGCTTCTAGTAGGAGGGCTGAAAGGGAGCAACTTTTCCTCCAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR CCA 90 bp TCCCTTTCAGCCCTCCTACTAGAAGCACTGGAGCTAGGCTGGCGGGCATTGGACCATCAAGCCCTTGAATaGTGGTTTCTTTGTTTGTTC +
Preference number: 4 (lower is better)
Translates to: SLSALLLEALELGWRALDHQALE*WFLCLF
Trigger: GAACAAACAAAGAAACCACCATTCAAGGGCTTGATG...GTCCAATGCCCGCCAGCCTAGCTCCAGTGCTTCTAGTAGGAGGGCTGAAAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR CCA 90 bp TATTCTGGAGCATGGGGAGCTGAAAGTGTTGCAAGGAAACTGCTGTGTGAAATTTCTGCTGACAGATGCTaGCGTAGCGAGCCAGGGCGT +
Preference number: 4 (lower is better)
Translates to: YSGAWGAESVARKLLCEISADRC*RSEPGR
Trigger: ACGCCCTGGCTCGCTACGCCAGCATCTGTCAGCAGA...AATTTCACACAGCAGTTTCCTTGCAACACTTTCAGCTCCCCATGCTCCAGAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
CDS-3UTR CCA 90 bp TCTTGGGTGGGTATTCTGGAGCATGGGGAGCTGAAAGTGTTGCAAGGAAACTGCCTGGAGTATACTTCTTaGTGCAGGCATGTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: SWVGILEHGELKVLQGNCLEYTS*CRHVQQ
Trigger: CTGCTGGACATGCCTGCACCAAGAAGTATACTCCAG...GCAGTTTCCTTGCAACACTTTCAGCTCCCCATGCTCCAGAATACCCACCCAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647789.2
ENST00000648064.1
CDS-3UTR CCA 90 bp ATTGTGTCGAATTTCCAGGATTGGAGGAAAAGTTGCTCCCTTTCAGCCCTCCTAGCAGGAACAGTACGGTaGAGAGCTGTTACGGTGGCC +
Preference number: 4 (lower is better)
Translates to: IVSNFQDWRKSCSLSALLAGTVR*RAVTVA
Trigger: GGCCACCGTAACAGCTCTCCACCGTACTGTTCCTGC...TAGGAGGGCTGAAAGGGAGCAACTTTTCCTCCAATCCTGGAAATTCGACACAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR CCA 90 bp CCTATTATTTTCTTGGGTGGGTATTCTGGAGCATGGGGAGCTGAAAGTGTTGCACGGTGTCCAGTGAGTTaGATTCTGGAGGCGGTGGGA +
Preference number: 4 (lower is better)
Translates to: PIIFLGGYSGAWGAESVARCPVS*ILEAVG
Trigger: TCCCACCGCCTCCAGAATCCAACTCACTGGACACCG...TGCAACACTTTCAGCTCCCCATGCTCCAGAATACCCACCCAAGAAAATAATAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648064.1
CDS-3UTR TCA 90 bp ATTGTGTCGAATTTCCAGGATTGGAGGAAAAGTTGCTCCCTTTCAGCCCTCCTACCCCGATGCTCTGGTTaGTGGAACTGTCCACAGAGA +
Preference number: 4 (lower is better)
Translates to: IVSNFQDWRKSCSLSALLPRCSG*WNCPQR
Trigger: TCTCTGTGGACAGTTCCATCAACCAGAGCATCGGGG...TAGGAGGGCTGAAAGGGAGCAACTTTTCCTCCAATCCTGGAAATTCGACACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR GCA 90 bp CCCAGAAGAACCCGTGTGAACATACTGTCCTTTGGCCGCCTGGCAGTTAGCCATTTCCATTGGCAACAATaGTCTGGGCAATTTCTGAGA +
Preference number: 4 (lower is better)
Translates to: PRRTRVNILSFGRLAVSHFHWQQ*SGQFLR
Trigger: TCTCAGAAATTGCCCAGAGCATTGTTGCCAATGGAA...ATGGCTAACTGCCAGGCGGCCAAAGGACAGTATGTTCACACGGGTTCTTCTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616752.1
CDS-3UTR GCA 90 bp CTAATTGTGTCGAATTTCCAGGATTGGAGGAAAAGTTGCTCCCTTTCAGCCCTCTCCACCTTGATCCTCTaGAGGCGGTTCCCCATGGTA +
Preference number: 4 (lower is better)
Translates to: LIVSNFQDWRKSCSLSALSTLIL*RRFPMV
Trigger: TACCATGGGGAACCGCCTGCAGAGGATCAAGGTGGA...GAGGGCTGAAAGGGAGCAACTTTTCCTCCAATCCTGGAAATTCGACACAATTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR GCA 90 bp GTGGGTATTCTGGAGCATGGGGAGCTGAAAGTGTTGCAAGGAAACTGCTGTGTGGAGTATACTTCTTGGTaGAGGCATGTCCAGCAGTCA +
Preference number: 4 (lower is better)
Translates to: VGILEHGELKVLQGNCCVEYTSW*RHVQQS
Trigger: TGACTGCTGGACATGCCTGCACCAAGAAGTATACTC...CACACAGCAGTTTCCTTGCAACACTTTCAGCTCCCCATGCTCCAGAATACCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
CDS-3UTR GCA 90 bp CTAATTGTGTCGAATTTCCAGGATTGGAGGAAAAGTTGCTCCCTTTCAGCCCTCGATGCCAGGAACAGCTaGAGGAACAGTACGGTGGAG +
Preference number: 4 (lower is better)
Translates to: LIVSNFQDWRKSCSLSALDARNS*RNSTVE
Trigger: CTCCACCGTACTGTTCCTGCAGCTGTTCCTGGCATC...GAGGGCTGAAAGGGAGCAACTTTTCCTCCAATCCTGGAAATTCGACACAATTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR GCA 90 bp ATTGTGTCGAATTTCCAGGATTGGAGGAAAAGTTGCTCCCTTTCAGCCCTCCTAGGTTGCCTCCTTGTTTaGAGCCTTGCCACCCAAGAG +
Preference number: 4 (lower is better)
Translates to: IVSNFQDWRKSCSLSALLGCLLV*SLATQE
Trigger: CTCTTGGGTGGCAAGGCTGCAAACAAGGAGGCAACC...TAGGAGGGCTGAAAGGGAGCAACTTTTCCTCCAATCCTGGAAATTCGACACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616752.1
CDS-3UTR GCA 90 bp AGCAGCCCCAGAAGAACCCGTGTGAACATACTGTCCTTTGGCCGCCTGGCAGTTGTGTTGCAAGGAAACTaGTGTGTGAAATTTGATCAG +
Preference number: 4 (lower is better)
Translates to: SSPRRTRVNILSFGRLAVVLQGN*CVKFDQ
Trigger: CTGATCAAATTTCACACAGCAGTTTCCTTGCAACAC...AACTGCCAGGCGGCCAAAGGACAGTATGTTCACACGGGTTCTTCTGGGGCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616752.1
CDS-3UTR CCA 90 bp GGGTATTCTGGAGCATGGGGAGCTGAAAGTGTTGCAAGGAAACTGCTGTGTGAAGGATCCCCTTTCCATTaGCAACAATGCTCTGGGCAA +
Preference number: 4 (lower is better)
Translates to: GYSGAWGAESVARKLLCEGSPFH*QQCSGQ
Trigger: TTGCCCAGAGCATTGTTGCCAATGGAAAGGGGATCC...TTCACACAGCAGTTTCCTTGCAACACTTTCAGCTCCCCATGCTCCAGAATACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
CDS-3UTR CCA 90 bp ATTGTGTCGAATTTCCAGGATTGGAGGAAAAGTTGCTCCCTTTCAGCCCTCCTAAGGCTGGATGGACACTaGTCGGCAATCCTCAGCACA +
Preference number: 4 (lower is better)
Translates to: IVSNFQDWRKSCSLSALLRLDGH*SAILST
Trigger: TGTGCTGAGGATTGCCGACCAGTGTCCATCCAGCCT...TAGGAGGGCTGAAAGGGAGCAACTTTTCCTCCAATCCTGGAAATTCGACACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR CCA 90 bp AATCTAATTGTGTCGAATTTCCAGGATTGGAGGAAAAGTTGCTCCCTTTCAGCCTCTGCTGACAGATGCTaGCGTAGCGAGCCAGGGCGT +
Preference number: 4 (lower is better)
Translates to: NLIVSNFQDWRKSCSLSASADRC*RSEPGR
Trigger: ACGCCCTGGCTCGCTACGCCAGCATCTGTCAGCAGA...GGCTGAAAGGGAGCAACTTTTCCTCCAATCCTGGAAATTCGACACAATTAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR CCA 90 bp CAGAATGCTTGGTTCACCCTACAATATAATCGCTGCTTTTCTTGGTTGCTTCTCTCTGCTGACAGATGCTaGCGTAGCGAGCCAGGGCGT +
Preference number: 4 (lower is better)
Translates to: QNAWFTLQYNRCFSWLLLSADRC*RSEPGR
Trigger: ACGCCCTGGCTCGCTACGCCAGCATCTGTCAGCAGA...GAGAAGCAACCAAGAAAAGCAGCGATTATATTGTAGGGTGAACCAAGCATTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649902.1
CDS-3UTR CCA 90 bp AGGAAAAGTTGCTCCCTTTCAGCCCTCCTACTAGAAGCACTGGAGCTAGGCTGGTTCATAAAAGCCTCCTaGGTTGCCTCCTTGTTTGCA +
Preference number: 4 (lower is better)
Translates to: RKSCSLSALLLEALELGWFIKAS*VASLFA
Trigger: TGCAAACAAGGAGGCAACCCAGGAGGCTTTTATGAA...CCAGCCTAGCTCCAGTGCTTCTAGTAGGAGGGCTGAAAGGGAGCAACTTTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR CCA 90 bp CAGCAGTTCAAATCTAATTGTGTCGAATTTCCAGGATTGGAGGAAAAGTTGCTCTGTCCTTTGGCCGCCTaGCAGTTAGCCATGGCCCGC +
Preference number: 4 (lower is better)
Translates to: QQFKSNCVEFPGLEEKLLCPLAA*QLAMAR
Trigger: GCGGGCCATGGCTAACTGCCAGGCGGCCAAAGGACA...GAGCAACTTTTCCTCCAATCCTGGAAATTCGACACAATTAGATTTGAACTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR CCA 90 bp GTCTCCTGTCATCAACTATACTCTAGTGTGGATAATTCAAAATTCTCTCTAGCCAGGCAGCCAGTGCACTaGCCTGCAGGGCCCGTCCAT +
Preference number: 4 (lower is better)
Translates to: VSCHQLYSSVDNSKFSLARQPVH*PAGPVH
Trigger: ATGGACGGGCCCTGCAGGCCAGTGCACTGGCTGCCT...GGCTAGAGAGAATTTTGAATTATCCACACTAGAGTATAGTTGATGACAGGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649902.1
CDS-3UTR CCA 90 bp ATTGTGTCGAATTTCCAGGATTGGAGGAAAAGTTGCTCCCTTTCAGCCCTCCTAAGGGCTGGAAATCGGTaGGCCATGGTGACAGGTCTA +
Preference number: 4 (lower is better)
Translates to: IVSNFQDWRKSCSLSALLRAGNR*AMVTGL
Trigger: TAGACCTGTCACCATGGCCCACCGATTTCCAGCCCT...TAGGAGGGCTGAAAGGGAGCAACTTTTCCTCCAATCCTGGAAATTCGACACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648758.1
CDS-3UTR TCA 90 bp GAGGAAAAGTTGCTCCCTTTCAGCCCTCCTACTAGAAGCACTGGAGCTAGGCTGCTGCTGTGTGAAATTTaGTCAGGTCCTTGGTATTCA +
Preference number: 4 (lower is better)
Translates to: EEKLLPFSPPTRSTGARLLLCEI*SGPWYS
Trigger: TGAATACCAAGGACCTGATCAAATTTCACACAGCAG...CAGCCTAGCTCCAGTGCTTCTAGTAGGAGGGCTGAAAGGGAGCAACTTTTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
CDS-3UTR TCA 90 bp GTGTCGAATTTCCAGGATTGGAGGAAAAGTTGCTCCCTTTCAGCCCTCCTACTATGGAGCATGGGGAGCTaGAAGTGTTGCAAGGAAACT +
Preference number: 4 (lower is better)
Translates to: VSNFQDWRKSCSLSALLLWSMGS*KCCKET
Trigger: AGTTTCCTTGCAACACTTTCAGCTCCCCATGCTCCA...TAGTAGGAGGGCTGAAAGGGAGCAACTTTTCCTCCAATCCTGGAAATTCGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
CDS-3UTR GCA 90 bp ATTATTTTCTTGGGTGGGTATTCTGGAGCATGGGGAGCTGAAAGTGTTGCAAGGAGGATTTCTCGGAACTaGCGGCGGTTCTCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: IIFLGGYSGAWGAESVARRISRN*RRFSSV
Trigger: CACTGAAGAGAACCGCCGGCAGTTCCGAGAAATCCT...CCTTGCAACACTTTCAGCTCCCCATGCTCCAGAATACCCACCCAAGAAAATAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647789.2
ENST00000648064.1
CDS-3UTR GCA 90 bp AATCTAATTGTGTCGAATTTCCAGGATTGGAGGAAAAGTTGCTCCCTTTCAGCCCATTCTGCTGACAGATaGTGGCGTAGCGAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: NLIVSNFQDWRKSCSLSAHSADR*WRSEPG
Trigger: CCCTGGCTCGCTACGCCAGCATCTGTCAGCAGAATG...GGCTGAAAGGGAGCAACTTTTCCTCCAATCCTGGAAATTCGACACAATTAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR GCA 90 bp GGGTATTCTGGAGCATGGGGAGCTGAAAGTGTTGCAAGGAAACTGCTGTGTGAACAGACAAAAAGCAGATaGCAGGAACAGCTGCAGGAA +
Preference number: 4 (lower is better)
Translates to: GYSGAWGAESVARKLLCEQTKSR*QEQLQE
Trigger: TTCCTGCAGCTGTTCCTGGCATCTGCTTTTTGTCTG...TTCACACAGCAGTTTCCTTGCAACACTTTCAGCTCCCCATGCTCCAGAATACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
CDS-3UTR GCA 90 bp CACATTTTCAAATGCCTAATAGACACTATCGGTAGATACCTTCTTGGCCCAAAGCCTTGTTTGCAGCCTTaGCACCCCAGGCAGCCAGTG +
Preference number: 4 (lower is better)
Translates to: HIFKCLIDTIGRYLLGPKPCLQP*HPRQPV
Trigger: CACTGGCTGCCTGGGGTGGCAAGGCTGCAAACAAGG...CTTTGGGCCAAGAAGGTATCTACCGATAGTGTCTATTAGGCATTTGAAAATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649902.1
CDS-3UTR GCA 90 bp AAATCTAATTGTGTCGAATTTCCAGGATTGGAGGAAAAGTTGCTCCCTTTCAGCGGTTGCCTCCTTGTTTaGAGCCTTGCCACCCCAGGC +
Preference number: 4 (lower is better)
Translates to: KSNCVEFPGLEEKLLPFSGCLLV*SLATPG
Trigger: GCCTGGGGTGGCAAGGCTGCAAACAAGGAGGCAACC...GCTGAAAGGGAGCAACTTTTCCTCCAATCCTGGAAATTCGACACAATTAGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR CCA 90 bp TTGGAGGAAAAGTTGCTCCCTTTCAGCCCTCCTACTAGAAGCACTGGAGCTAGGTTCTCAGTAACATACTaGCAGTGTTCCAGGTCATGG +
Preference number: 4 (lower is better)
Translates to: LEEKLLPFSPPTRSTGARFSVTY*QCSRSW
Trigger: CCATGACCTGGAACACTGCCAGTATGTTACTGAGAA...CCTAGCTCCAGTGCTTCTAGTAGGAGGGCTGAAAGGGAGCAACTTTTCCTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR CCA 90 bp TCTTGGGTGGGTATTCTGGAGCATGGGGAGCTGAAAGTGTTGCAAGGAAACTGCTTCTCAGTAACATACTaGCAGTGTTCCAGGTCATGG +
Preference number: 4 (lower is better)
Translates to: SWVGILEHGELKVLQGNCFSVTY*QCSRSW
Trigger: CCATGACCTGGAACACTGCCAGTATGTTACTGAGAA...GCAGTTTCCTTGCAACACTTTCAGCTCCCCATGCTCCAGAATACCCACCCAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647789.2
ENST00000648064.1
CDS-3UTR CCA 90 bp GTGTCGAATTTCCAGGATTGGAGGAAAAGTTGCTCCCTTTCAGCCCTCCTACTAGGATCCCCTTTCCATTaGCAACAATGCTCTGGGCAA +
Preference number: 4 (lower is better)
Translates to: VSNFQDWRKSCSLSALLLGSPFH*QQCSGQ
Trigger: TTGCCCAGAGCATTGTTGCCAATGGAAAGGGGATCC...TAGTAGGAGGGCTGAAAGGGAGCAACTTTTCCTCCAATCCTGGAAATTCGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR CCA 90 bp CTAATTGTGTCGAATTTCCAGGATTGGAGGAAAAGTTGCTCCCTTTCAGCCCTCGCAGGCGGTTCCCCATaGTACCTACAGATTCATCTG +
Preference number: 4 (lower is better)
Translates to: LIVSNFQDWRKSCSLSALAGGSP*YLQIHL
Trigger: CAGATGAATCTGTAGGTACCATGGGGAACCGCCTGC...GAGGGCTGAAAGGGAGCAACTTTTCCTCCAATCCTGGAAATTCGACACAATTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR CCA 90 bp GTGTCGAATTTCCAGGATTGGAGGAAAAGTTGCTCCCTTTCAGCCCTCCTACTACTGGAGTATACTTCTTaGTGCAGGCATGTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: VSNFQDWRKSCSLSALLLLEYTS*CRHVQQ
Trigger: CTGCTGGACATGCCTGCACCAAGAAGTATACTCCAG...TAGTAGGAGGGCTGAAAGGGAGCAACTTTTCCTCCAATCCTGGAAATTCGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR CCA 90 bp AATCTAATTGTGTCGAATTTCCAGGATTGGAGGAAAAGTTGCTCCCTTTCAGCCGCAGGAACAGTACGGTaGAGAGCTGTTACGGTGGCC +
Preference number: 4 (lower is better)
Translates to: NLIVSNFQDWRKSCSLSAAGTVR*RAVTVA
Trigger: GGCCACCGTAACAGCTCTCCACCGTACTGTTCCTGC...GGCTGAAAGGGAGCAACTTTTCCTCCAATCCTGGAAATTCGACACAATTAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR CCA 90 bp CAAAGAAAACAATGCTTCTCCGTGTTGGAAAGTCAAGCCCCAAATGTGAACATCGCAGGAACAGTACGGTaGAGAGCTGTTACGGTGGCC +
Preference number: 4 (lower is better)
Translates to: QRKQCFSVLESQAPNVNIAGTVR*RAVTVA
Trigger: GGCCACCGTAACAGCTCTCCACCGTACTGTTCCTGC...GATGTTCACATTTGGGGCTTGACTTTCCAACACGGAGAAGCATTGTTTTCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649902.1
CDS-3UTR CCA 90 bp AGTTCAAATCTAATTGTGTCGAATTTCCAGGATTGGAGGAAAAGTTGCTCCCTTTGTCCTTTGGCCGCCTaGCAGTTAGCCATGGCCCGC +
Preference number: 4 (lower is better)
Translates to: SSNLIVSNFQDWRKSCSLCPLAA*QLAMAR
Trigger: GCGGGCCATGGCTAACTGCCAGGCGGCCAAAGGACA...AAGGGAGCAACTTTTCCTCCAATCCTGGAAATTCGACACAATTAGATTTGAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR CCA 90 bp TGTTTCATAAGATGCACTTCTCTACACTCAGCTAATGAGGTGTTTCAATCAGCATGTCCTTTGGCCGCCTaGCAGTTAGCCATGGCCCGC +
Preference number: 4 (lower is better)
Translates to: CFIRCTSLHSANEVFQSACPLAA*QLAMAR
Trigger: GCGGGCCATGGCTAACTGCCAGGCGGCCAAAGGACA...TGCTGATTGAAACACCTCATTAGCTGAGTGTAGAGAAGTGCATCTTATGAAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647789.2
ENST00000648064.1
CDS-3UTR CCA 90 bp TTCAAATCTAATTGTGTCGAATTTCCAGGATTGGAGGAAAAGTTGCTCCCTTTCTGTCCTTTGGCCGCCTaGCAGTTAGCCATGGCCCGC +
Preference number: 4 (lower is better)
Translates to: FKSNCVEFPGLEEKLLPFCPLAA*QLAMAR
Trigger: GCGGGCCATGGCTAACTGCCAGGCGGCCAAAGGACA...GAAAGGGAGCAACTTTTCCTCCAATCCTGGAAATTCGACACAATTAGATTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR CCA 90 bp AGGAAAAGTTGCTCCCTTTCAGCCCTCCTACTAGAAGCACTGGAGCTAGGCTGGTCGAATTTCCAGGATTaGAGGAAAAGTTGCTCCCTT +
Preference number: 4 (lower is better)
Translates to: RKSCSLSALLLEALELGWSNFQD*RKSCSL
Trigger: AAGGGAGCAACTTTTCCTCCAATCCTGGAAATTCGA...CCAGCCTAGCTCCAGTGCTTCTAGTAGGAGGGCTGAAAGGGAGCAACTTTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR CCA 90 bp AAAAGTATCCTAGGTTCAGTTCTTGGTCCTCTTATCTCCTTCCCTCTGAAGTGTAGGGCTGGAAATCGGTaGGCCATGGTGACAGGTCTG +
Preference number: 4 (lower is better)
Translates to: KSILGSVLGPLISFPLKCRAGNR*AMVTGL
Trigger: CAGACCTGTCACCATGGCCCACCGATTTCCAGCCCT...ACACTTCAGAGGGAAGGAGATAAGAGGACCAAGAACTGAACCTAGGATACTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649902.1
3UTR CAA 72 bp TGGGTGGGTATTCTGGAGCATGGGGAGCTGAAAGTGTaGCAAGGAAACTGCTGTGTGAAATTTGATCAGGTC +
Preference number: 4 (lower is better)
Translates to: WVGILEHGELKV*QGNCCVKFDQV
Trigger: GACCTGATCAAATTTCACACAGCAGTTTCCTTGCAACACTTTCAGCTCCCCATGCTCCAGAATACCCACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647789.2
ENST00000648064.1
CDS-3UTR TCA 90 bp CAAAGAAAACAATGCTTCTCCGTGTTGGAAAGTCAAGCCCCAAATGTGAACATCCAGTGTTTTCCACCTTaGTCCTCTGCAGGCGGTTCC +
Preference number: 4 (lower is better)
Translates to: QRKQCFSVLESQAPNVNIQCFPP*SSAGGS
Trigger: GGAACCGCCTGCAGAGGATCAAGGTGGAAAACACTG...GATGTTCACATTTGGGGCTTGACTTTCCAACACGGAGAAGCATTGTTTTCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000649902.1
CDS-3UTR TCA 90 bp TTCAAATCTAATTGTGTCGAATTTCCAGGATTGGAGGAAAAGTTGCTCCCTTTCCTGAGCACAGCGCTCTaGGAGGCCATCAAGCCCTTG +
Preference number: 4 (lower is better)
Translates to: FKSNCVEFPGLEEKLLPFLSTAL*EAIKPL
Trigger: CAAGGGCTTGATGGCCTCTCAGAGCGCTGTGCTCAG...GAAAGGGAGCAACTTTTCCTCCAATCCTGGAAATTCGACACAATTAGATTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR TCA 90 bp CAAAATAAAAAGTATCCTAGGTTCAGTTCTTGGTCCTCTTATCTCCTTCCCTCTCTGAGCACAGCGCTCTaGGAGGCCATCAAGCCCTTG +
Preference number: 4 (lower is better)
Translates to: QNKKYPRFSSWSSYLLPSLSTAL*EAIKPL
Trigger: CAAGGGCTTGATGGCCTCTCAGAGCGCTGTGCTCAG...AGAGGGAAGGAGATAAGAGGACCAAGAACTGAACCTAGGATACTTTTTATTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649902.1
CDS-3UTR TCA 90 bp TTGGAGGAAAAGTTGCTCCCTTTCAGCCCTCCTACTAGAAGCACTGGAGCTAGGCTGCTGTGTGAAATTTaGTCAGGTCCTTGGTATTCA +
Preference number: 4 (lower is better)
Translates to: LEEKLLPFSPPTRSTGARLLCEI*SGPWYS
Trigger: TGAATACCAAGGACCTGATCAAATTTCACACAGCAG...CCTAGCTCCAGTGCTTCTAGTAGGAGGGCTGAAAGGGAGCAACTTTTCCTCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
CDS-3UTR TCA 90 bp TCTTGGGTGGGTATTCTGGAGCATGGGGAGCTGAAAGTGTTGCAAGGAAACTGCAAGGAAACTGCTGTGTaGAATTTGATCAGGTCCTTG +
Preference number: 4 (lower is better)
Translates to: SWVGILEHGELKVLQGNCKETAV*NLIRSL
Trigger: CAAGGACCTGATCAAATTTCACACAGCAGTTTCCTT...GCAGTTTCCTTGCAACACTTTCAGCTCCCCATGCTCCAGAATACCCACCCAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647789.2
ENST00000648064.1
CDS-3UTR TCA 90 bp CTATTATTTTCTTGGGTGGGTATTCTGGAGCATGGGGAGCTGAAAGTGTTGCAACTTGCTGCGCATCAGTaGGCAGAGCCACAGTCAAAT +
Preference number: 4 (lower is better)
Translates to: LLFSWVGILEHGELKVLQLAAHQ*AEPQSN
Trigger: ATTTGACTGTGGCTCTGCTCACTGATGCGCAGCAAG...TTGCAACACTTTCAGCTCCCCATGCTCCAGAATACCCACCCAAGAAAATAATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648064.1
CDS-3UTR TCA 90 bp CCAGGATTGGAGGAAAAGTTGCTCCCTTTCAGCCCTCCTACTAGAAGCACTGGAGAAGACCTTTACTGTTaGAACCCAGTCATGTCTAGT +
Preference number: 4 (lower is better)
Translates to: PGLEEKLLPFSPPTRSTGEDLYC*NPVMSS
Trigger: ACTAGACATGACTGGGTTTCAACAGTAAAGGTCTTC...TCCAGTGCTTCTAGTAGGAGGGCTGAAAGGGAGCAACTTTTCCTCCAATCCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647789.2
CDS-3UTR GCA 90 bp GGATTGGAGGAAAAGTTGCTCCCTTTCAGCCCTCCTACTAGAAGCACTGGAGCTTTCCATTGGCAACAATaGTCTGGGCAATTTCTGAGA +
Preference number: 4 (lower is better)
Translates to: GLEEKLLPFSPPTRSTGAFHWQQ*SGQFLR
Trigger: TCTCAGAAATTGCCCAGAGCATTGTTGCCAATGGAA...AGCTCCAGTGCTTCTAGTAGGAGGGCTGAAAGGGAGCAACTTTTCCTCCAATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR GCA 90 bp ATTGTGTCGAATTTCCAGGATTGGAGGAAAAGTTGCTCCCTTTCAGCCCTCCTAACCTACAGATTCATCTaGAGCCAGGATCCCCTTTCC +
Preference number: 4 (lower is better)
Translates to: IVSNFQDWRKSCSLSALLTYRFI*SQDPLS
Trigger: GGAAAGGGGATCCTGGCTGCAGATGAATCTGTAGGT...TAGGAGGGCTGAAAGGGAGCAACTTTTCCTCCAATCCTGGAAATTCGACACAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR GCA 90 bp CTAATTGTGTCGAATTTCCAGGATTGGAGGAAAAGTTGCTCCCTTTCAGCCCTCACCTACAGATTCATCTaGAGCCAGGATCCCCTTTCC +
Preference number: 4 (lower is better)
Translates to: LIVSNFQDWRKSCSLSALTYRFI*SQDPLS
Trigger: GGAAAGGGGATCCTGGCTGCAGATGAATCTGTAGGT...GAGGGCTGAAAGGGAGCAACTTTTCCTCCAATCCTGGAAATTCGACACAATTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR GCA 90 bp TATTCTGGAGCATGGGGAGCTGAAAGTGTTGCAAGGAAACTGCTGTGTGAAATTAGGATTTCTCGGAACTaGCGGCGGTTCTCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: YSGAWGAESVARKLLCEIRISRN*RRFSSV
Trigger: CACTGAAGAGAACCGCCGGCAGTTCCGAGAAATCCT...AATTTCACACAGCAGTTTCCTTGCAACACTTTCAGCTCCCCATGCTCCAGAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
CDS-3UTR GCA 90 bp AGTTCAAATCTAATTGTGTCGAATTTCCAGGATTGGAGGAAAAGTTGCTCCCTTGGTTGCCTCCTTGTTTaGAGCCTTGCCACCCCAGGC +
Preference number: 4 (lower is better)
Translates to: SSNLIVSNFQDWRKSCSLGCLLV*SLATPG
Trigger: GCCTGGGGTGGCAAGGCTGCAAACAAGGAGGCAACC...AAGGGAGCAACTTTTCCTCCAATCCTGGAAATTCGACACAATTAGATTTGAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR GCA 90 bp GTCTCCTGTCATCAACTATACTCTAGTGTGGATAATTCAAAATTCTCTCTAGCCGGTTGCCTCCTTGTTTaGAGCCTTGCCACCCCAGGC +
Preference number: 4 (lower is better)
Translates to: VSCHQLYSSVDNSKFSLAGCLLV*SLATPG
Trigger: GCCTGGGGTGGCAAGGCTGCAAACAAGGAGGCAACC...GGCTAGAGAGAATTTTGAATTATCCACACTAGAGTATAGTTGATGACAGGAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649902.1
CDS-3UTR GCA 90 bp CCAGGATTGGAGGAAAAGTTGCTCCCTTTCAGCCCTCCTACTAGAAGCACTGGATTTAGGAATGAAGAATaGCAGCCTGACCAAATCCAG +
Preference number: 4 (lower is better)
Translates to: PGLEEKLLPFSPPTRSTGFRNEE*QPDQIQ
Trigger: CTGGATTTGGTCAGGCTGGCATTCTTCATTCCTAAA...TCCAGTGCTTCTAGTAGGAGGGCTGAAAGGGAGCAACTTTTCCTCCAATCCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648758.1
CDS-3UTR CCA 90 bp AGTTCAAATCTAATTGTGTCGAATTTCCAGGATTGGAGGAAAAGTTGCTCCCTTCTCCTGGGTGAGGGCTaGAAATCGGTGGGCCATGGT +
Preference number: 4 (lower is better)
Translates to: SSNLIVSNFQDWRKSCSLLLGEG*KSVGHG
Trigger: ACCATGGCCCACCGATTTCCAGCCCTCACCCAGGAG...AAGGGAGCAACTTTTCCTCCAATCCTGGAAATTCGACACAATTAGATTTGAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR CCA 90 bp CTTCCCAAAATAAAAAGTATCCTAGGTTCAGTTCTTGGTCCTCTTATCTCCTTCCTCCTGGGTGAGGGCTaGAAATCGGTGGGCCATGGT +
Preference number: 4 (lower is better)
Translates to: LPKIKSILGSVLGPLISFLLGEG*KSVGHG
Trigger: ACCATGGCCCACCGATTTCCAGCCCTCACCCAGGAG...GAAGGAGATAAGAGGACCAAGAACTGAACCTAGGATACTTTTTATTTTGGGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649902.1
CDS-3UTR CCA 90 bp CTATTATTTTCTTGGGTGGGTATTCTGGAGCATGGGGAGCTGAAAGTGTTGCAAACACCCCCGATGCTCTaGTTGATGGAACTGTCCACA +
Preference number: 4 (lower is better)
Translates to: LLFSWVGILEHGELKVLQTPPML*LMELST
Trigger: TGTGGACAGTTCCATCAACCAGAGCATCGGGGGTGT...TTGCAACACTTTCAGCTCCCCATGCTCCAGAATACCCACCCAAGAAAATAATAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000647789.2
ENST00000648064.1
CDS-3UTR CCA 90 bp CCTATTATTTTCTTGGGTGGGTATTCTGGAGCATGGGGAGCTGAAAGTGTTGCAAGAGGAGCACCTCCTTaGTCTAACTTGATTCCCACC +
Preference number: 4 (lower is better)
Translates to: PIIFLGGYSGAWGAESVARGAPP*SNLIPT
Trigger: GGTGGGAATCAAGTTAGACCAAGGAGGTGCTCCTCT...TGCAACACTTTCAGCTCCCCATGCTCCAGAATACCCACCCAAGAAAATAATAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647789.2
ENST00000648064.1
CDS-3UTR CCA 90 bp AGGAAAAGTTGCTCCCTTTCAGCCCTCCTACTAGAAGCACTGGAGCTAGGCTGGCATCAAGCCCTTGAATaGTGGTTTCTTTGTTTGTTC +
Preference number: 4 (lower is better)
Translates to: RKSCSLSALLLEALELGWHQALE*WFLCLF
Trigger: GAACAAACAAAGAAACCACCATTCAAGGGCTTGATG...CCAGCCTAGCTCCAGTGCTTCTAGTAGGAGGGCTGAAAGGGAGCAACTTTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR CCA 90 bp GAGGAAAAGTTGCTCCCTTTCAGCCCTCCTACTAGAAGCACTGGAGCTAGGCTGCATCAAGCCCTTGAATaGTGGTTTCTTTGTTTGTTC +
Preference number: 4 (lower is better)
Translates to: EEKLLPFSPPTRSTGARLHQALE*WFLCLF
Trigger: GAACAAACAAAGAAACCACCATTCAAGGGCTTGATG...CAGCCTAGCTCCAGTGCTTCTAGTAGGAGGGCTGAAAGGGAGCAACTTTTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR CCA 90 bp AAAAGTATCCTAGGTTCAGTTCTTGGTCCTCTTATCTCCTTCCCTCTGAAGTGTAGGCTGGATGGACACTaGTCGGCAATCCTCAGCACA +
Preference number: 4 (lower is better)
Translates to: KSILGSVLGPLISFPLKCRLDGH*SAILST
Trigger: TGTGCTGAGGATTGCCGACCAGTGTCCATCCAGCCT...ACACTTCAGAGGGAAGGAGATAAGAGGACCAAGAACTGAACCTAGGATACTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649902.1
CDS-3UTR CCA 90 bp GCACTTCTCTACACTCAGCTAATGAGGTGTTTCAATCAGCAGTTGTTCTTTGGAGATAGCGAGGCTGGATaGACACTGGTCGGCAATCCT +
Preference number: 4 (lower is better)
Translates to: ALLYTQLMRCFNQQLFFGDSEAG*TLVGNP
Trigger: AGGATTGCCGACCAGTGTCCATCCAGCCTCGCTATC...TCCAAAGAACAACTGCTGATTGAAACACCTCATTAGCTGAGTGTAGAGAAGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647789.2
ENST00000648064.1
CDS-3UTR CCA 90 bp CAAAGAAAACAATGCTTCTCCGTGTTGGAAAGTCAAGCCCCAAATGTGAACATCGATAGCGAGGCTGGATaGACACTGGTCGGCAATCCT +
Preference number: 4 (lower is better)
Translates to: QRKQCFSVLESQAPNVNIDSEAG*TLVGNP
Trigger: AGGATTGCCGACCAGTGTCCATCCAGCCTCGCTATC...GATGTTCACATTTGGGGCTTGACTTTCCAACACGGAGAAGCATTGTTTTCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649902.1
CDS-3UTR CCA 90 bp GCACTTCTCTACACTCAGCTAATGAGGTGTTTCAATCAGCAGTTGTTCTTTGGAGCGTTGGCGTTTTCCTaGATAGCGAGGCTGGATGGA +
Preference number: 4 (lower is better)
Translates to: ALLYTQLMRCFNQQLFFGALAFS*IARLDG
Trigger: TCCATCCAGCCTCGCTATCCAGGAAAACGCCAACGC...TCCAAAGAACAACTGCTGATTGAAACACCTCATTAGCTGAGTGTAGAGAAGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647789.2
ENST00000648064.1
CDS-3UTR CCA 90 bp AATCTAATTGTGTCGAATTTCCAGGATTGGAGGAAAAGTTGCTCCCTTTCAGCCGCGTTGGCGTTTTCCTaGATAGCGAGGCTGGATGGA +
Preference number: 4 (lower is better)
Translates to: NLIVSNFQDWRKSCSLSAALAFS*IARLDG
Trigger: TCCATCCAGCCTCGCTATCCAGGAAAACGCCAACGC...GGCTGAAAGGGAGCAACTTTTCCTCCAATCCTGGAAATTCGACACAATTAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR CCA 90 bp CAAAGAAAACAATGCTTCTCCGTGTTGGAAAGTCAAGCCCCAAATGTGAACATCGCGTTGGCGTTTTCCTaGATAGCGAGGCTGGATGGA +
Preference number: 4 (lower is better)
Translates to: QRKQCFSVLESQAPNVNIALAFS*IARLDG
Trigger: TCCATCCAGCCTCGCTATCCAGGAAAACGCCAACGC...GATGTTCACATTTGGGGCTTGACTTTCCAACACGGAGAAGCATTGTTTTCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000649902.1
CDS-3UTR CCA 90 bp GGATTGGAGGAAAAGTTGCTCCCTTTCAGCCCTCCTACTAGAAGCACTGGAGCTTCGAATTTCCAGGATTaGAGGAAAAGTTGCTCCCTT +
Preference number: 4 (lower is better)
Translates to: GLEEKLLPFSPPTRSTGASNFQD*RKSCSL
Trigger: AAGGGAGCAACTTTTCCTCCAATCCTGGAAATTCGA...AGCTCCAGTGCTTCTAGTAGGAGGGCTGAAAGGGAGCAACTTTTCCTCCAATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR CCA 90 bp TTGGAGGAAAAGTTGCTCCCTTTCAGCCCTCCTACTAGAAGCACTGGAGCTAGGTCGAATTTCCAGGATTaGAGGAAAAGTTGCTCCCTT +
Preference number: 4 (lower is better)
Translates to: LEEKLLPFSPPTRSTGARSNFQD*RKSCSL
Trigger: AAGGGAGCAACTTTTCCTCCAATCCTGGAAATTCGA...CCTAGCTCCAGTGCTTCTAGTAGGAGGGCTGAAAGGGAGCAACTTTTCCTCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR CCA 90 bp TCTTGGGTGGGTATTCTGGAGCATGGGGAGCTGAAAGTGTTGCAAGGAAACTGCTCAGCAGTTGTTCTTTaGATGAGGAGCCGATATTGT +
Preference number: 4 (lower is better)
Translates to: SWVGILEHGELKVLQGNCSAVVL*MRSRYC
Trigger: ACAATATCGGCTCCTCATCCAAAGAACAACTGCTGA...GCAGTTTCCTTGCAACACTTTCAGCTCCCCATGCTCCAGAATACCCACCCAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647789.2
ENST00000648064.1
CDS-3UTR TCA 90 bp AAATCTAATTGTGTCGAATTTCCAGGATTGGAGGAAAAGTTGCTCCCTTTCAGCCAGTGTTTTCCACCTTaGTCCTCTGCAGGCGGTTCC +
Preference number: 4 (lower is better)
Translates to: KSNCVEFPGLEEKLLPFSQCFPP*SSAGGS
Trigger: GGAACCGCCTGCAGAGGATCAAGGTGGAAAACACTG...GCTGAAAGGGAGCAACTTTTCCTCCAATCCTGGAAATTCGACACAATTAGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR TCA 90 bp GACCTCTACTGCCACATTTTCAAATGCCTAATAGACACTATCGGTAGATACCTTCCCCGATGCTCTGGTTaGTGGAACTGTCCACAGAGA +
Preference number: 4 (lower is better)
Translates to: DLYCHIFKCLIDTIGRYLPRCSG*WNCPQR
Trigger: TCTCTGTGGACAGTTCCATCAACCAGAGCATCGGGG...AAGGTATCTACCGATAGTGTCTATTAGGCATTTGAAAATGTGGCAGTAGAGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649902.1
CDS-3UTR TCA 90 bp CTTCTCCTCCCCCTTATATTTCCTAGCTTCTGTCAGTTAAATCATCACTTTTATCTGAGCACAGCGCTCTaGGAGGCCATCAAGCCCTTG +
Preference number: 4 (lower is better)
Translates to: LLLPLIFPSFCQLNHHFYLSTAL*EAIKPL
Trigger: CAAGGGCTTGATGGCCTCTCAGAGCGCTGTGCTCAG...ATAAAAGTGATGATTTAACTGACAGAAGCTAGGAAATATAAGGGGGAGGAGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647789.2
CDS-3UTR TCA 90 bp CCAGGATTGGAGGAAAAGTTGCTCCCTTTCAGCCCTCCTACTAGAAGCACTGGACAGTTGTTCTTTGGATaGGGAGCCGATATTGTTTTA +
Preference number: 4 (lower is better)
Translates to: PGLEEKLLPFSPPTRSTGQLFFG*GADIVL
Trigger: TAAAACAATATCGGCTCCTCATCCAAAGAACAACTG...TCCAGTGCTTCTAGTAGGAGGGCTGAAAGGGAGCAACTTTTCCTCCAATCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647789.2
ENST00000648064.1
CDS-3UTR TCA 90 bp CCTATTATTTTCTTGGGTGGGTATTCTGGAGCATGGGGAGCTGAAAGTGTTGCAGCAAGAGCAGAAAAGTaGAACCCGATAGCAGCTGAA +
Preference number: 4 (lower is better)
Translates to: PIIFLGGYSGAWGAESVAARAEK*NPIAAE
Trigger: TTCAGCTGCTATCGGGTTTCACTTTTCTGCTCTTGC...TGCAACACTTTCAGCTCCCCATGCTCCAGAATACCCACCCAAGAAAATAATAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000647789.2
CDS-3UTR GCA 90 bp AGCAGTTCAAATCTAATTGTGTCGAATTTCCAGGATTGGAGGAAAAGTTGCTCCTCCACCTTGATCCTCTaGAGGCGGTTCCCCATGGTA +
Preference number: 4 (lower is better)
Translates to: SSSNLIVSNFQDWRKSCSSTLIL*RRFPMV
Trigger: TACCATGGGGAACCGCCTGCAGAGGATCAAGGTGGA...GGAGCAACTTTTCCTCCAATCCTGGAAATTCGACACAATTAGATTTGAACTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR GCA 90 bp CACATTTTCAAATGCCTAATAGACACTATCGGTAGATACCTTCTTGGCCCAAAGTCCACCTTGATCCTCTaGAGGCGGTTCCCCATGGTA +
Preference number: 4 (lower is better)
Translates to: HIFKCLIDTIGRYLLGPKSTLIL*RRFPMV
Trigger: TACCATGGGGAACCGCCTGCAGAGGATCAAGGTGGA...CTTTGGGCCAAGAAGGTATCTACCGATAGTGTCTATTAGGCATTTGAAAATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649902.1
CDS-3UTR GCA 90 bp AGTTCAAATCTAATTGTGTCGAATTTCCAGGATTGGAGGAAAAGTTGCTCCCTTCATTCTGCTGACAGATaGTGGCGTAGCGAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: SSNLIVSNFQDWRKSCSLHSADR*WRSEPG
Trigger: CCCTGGCTCGCTACGCCAGCATCTGTCAGCAGAATG...AAGGGAGCAACTTTTCCTCCAATCCTGGAAATTCGACACAATTAGATTTGAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR GCA 90 bp TCTGAAGTGTTTCTGTTGAAATTGTCCTTCAGTCTCCTGTCATCAACTATACTCCATTCTGCTGACAGATaGTGGCGTAGCGAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: SEVFLLKLSFSLLSSTILHSADR*WRSEPG
Trigger: CCCTGGCTCGCTACGCCAGCATCTGTCAGCAGAATG...GAGTATAGTTGATGACAGGAGACTGAAGGACAATTTCAACAGAAACACTTCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649902.1
CDS-3UTR GCA 90 bp GGTGGGTATTCTGGAGCATGGGGAGCTGAAAGTGTTGCAAGGAAACTGCTGTGTGTGTTGCAAGGAAACTaGTGTGTGAAATTTGATCAG +
Preference number: 4 (lower is better)
Translates to: GGYSGAWGAESVARKLLCVLQGN*CVKFDQ
Trigger: CTGATCAAATTTCACACAGCAGTTTCCTTGCAACAC...ACACAGCAGTTTCCTTGCAACACTTTCAGCTCCCCATGCTCCAGAATACCCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
CDS-3UTR GCA 90 bp ATTTCCAGCAGTTCAAATCTAATTGTGTCGAATTTCCAGGATTGGAGGAAAAGTCCTTGTTTGCAGCCTTaGCACCCCAGGCAGCCAGTG +
Preference number: 4 (lower is better)
Translates to: ISSSSNLIVSNFQDWRKSPCLQP*HPRQPV
Trigger: CACTGGCTGCCTGGGGTGGCAAGGCTGCAAACAAGG...ACTTTTCCTCCAATCCTGGAAATTCGACACAATTAGATTTGAACTGCTGGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR GCA 90 bp GGGTATTCTGGAGCATGGGGAGCTGAAAGTGTTGCAAGGAAACTGCTGTGTGAAATTCCTGACTCTCTTTaGTTTCTTCCACTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: GYSGAWGAESVARKLLCEIPDSL*FLPLLL
Trigger: GAGGAGAAGTGGAAGAAAGCAAAGAGAGTCAGGAAT...TTCACACAGCAGTTTCCTTGCAACACTTTCAGCTCCCCATGCTCCAGAATACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647789.2
CDS-3UTR CCA 90 bp ATTTCCAGCAGTTCAAATCTAATTGTGTCGAATTTCCAGGATTGGAGGAAAAGTCTCCTGGGTGAGGGCTaGAAATCGGTGGGCCATGGT +
Preference number: 4 (lower is better)
Translates to: ISSSSNLIVSNFQDWRKSLLGEG*KSVGHG
Trigger: ACCATGGCCCACCGATTTCCAGCCCTCACCCAGGAG...ACTTTTCCTCCAATCCTGGAAATTCGACACAATTAGATTTGAACTGCTGGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR CCA 90 bp AATCTAATTGTGTCGAATTTCCAGGATTGGAGGAAAAGTTGCTCCCTTTCAGCCGCAGGCGGTTCCCCATaGTACCTACAGATTCATCTG +
Preference number: 4 (lower is better)
Translates to: NLIVSNFQDWRKSCSLSAAGGSP*YLQIHL
Trigger: CAGATGAATCTGTAGGTACCATGGGGAACCGCCTGC...GGCTGAAAGGGAGCAACTTTTCCTCCAATCCTGGAAATTCGACACAATTAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR CCA 90 bp CAGCAGTTCAAATCTAATTGTGTCGAATTTCCAGGATTGGAGGAAAAGTTGCTCAGGCTGGATGGACACTaGTCGGCAATCCTCAGCACA +
Preference number: 4 (lower is better)
Translates to: QQFKSNCVEFPGLEEKLLRLDGH*SAILST
Trigger: TGTGCTGAGGATTGCCGACCAGTGTCCATCCAGCCT...GAGCAACTTTTCCTCCAATCCTGGAAATTCGACACAATTAGATTTGAACTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR CCA 90 bp AAATCTAATTGTGTCGAATTTCCAGGATTGGAGGAAAAGTTGCTCCCTTTCAGCAGGCTGGATGGACACTaGTCGGCAATCCTCAGCACA +
Preference number: 4 (lower is better)
Translates to: KSNCVEFPGLEEKLLPFSRLDGH*SAILST
Trigger: TGTGCTGAGGATTGCCGACCAGTGTCCATCCAGCCT...GCTGAAAGGGAGCAACTTTTCCTCCAATCCTGGAAATTCGACACAATTAGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR CCA 90 bp CAGTTCAAATCTAATTGTGTCGAATTTCCAGGATTGGAGGAAAAGTTGCTCCCTGCGTTGGCGTTTTCCTaGATAGCGAGGCTGGATGGA +
Preference number: 4 (lower is better)
Translates to: QFKSNCVEFPGLEEKLLPALAFS*IARLDG
Trigger: TCCATCCAGCCTCGCTATCCAGGAAAACGCCAACGC...AGGGAGCAACTTTTCCTCCAATCCTGGAAATTCGACACAATTAGATTTGAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR CCA 90 bp TTCAAATCTAATTGTGTCGAATTTCCAGGATTGGAGGAAAAGTTGCTCCCTTTCGCAGGAACAGTACGGTaGAGAGCTGTTACGGTGGCC +
Preference number: 4 (lower is better)
Translates to: FKSNCVEFPGLEEKLLPFAGTVR*RAVTVA
Trigger: GGCCACCGTAACAGCTCTCCACCGTACTGTTCCTGC...GAAAGGGAGCAACTTTTCCTCCAATCCTGGAAATTCGACACAATTAGATTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR CCA 90 bp ATGTGTTGTATTTCCAGCAGTTCAAATCTAATTGTGTCGAATTTCCAGGATTGGGCACTGGAGCTAGGCTaGCGGGCATTGGACCCTAGT +
Preference number: 4 (lower is better)
Translates to: MCCISSSSNLIVSNFQDWALELG*RALDPS
Trigger: ACTAGGGTCCAATGCCCGCCAGCCTAGCTCCAGTGC...CCAATCCTGGAAATTCGACACAATTAGATTTGAACTGCTGGAAATACAACACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR TCA 90 bp AACATGTGTTGTATTTCCAGCAGTTCAAATCTAATTGTGTCGAATTTCCAGGATTCTTCTGCTCCTGGGTaGGGGCTGGAAATCGGTGGG +
Preference number: 4 (lower is better)
Translates to: NMCCISSSSNLIVSNFQDSSAPG*GLEIGG
Trigger: CCCACCGATTTCCAGCCCTCACCCAGGAGCAGAAGA...ATCCTGGAAATTCGACACAATTAGATTTGAACTGCTGGAAATACAACACATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR TCA 90 bp CTAATTGTGTCGAATTTCCAGGATTGGAGGAAAAGTTGCTCCCTTTCAGCCCTCAGGCCATCAAGCCCTTaGATGGTGGTTTCTTTGTTT +
Preference number: 4 (lower is better)
Translates to: LIVSNFQDWRKSCSLSALRPSSP*MVVSLF
Trigger: AAACAAAGAAACCACCATTCAAGGGCTTGATGGCCT...GAGGGCTGAAAGGGAGCAACTTTTCCTCCAATCCTGGAAATTCGACACAATTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR TCA 90 bp AGTTCAAATCTAATTGTGTCGAATTTCCAGGATTGGAGGAAAAGTTGCTCCCTTAGGTATAGCAGGCTGTaGAGAGCGACTGGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: SSNLIVSNFQDWRKSCSLRYSRL*RATGWK
Trigger: CTTCCACCCAGTCGCTCTTCACAGCCTGCTATACCT...AAGGGAGCAACTTTTCCTCCAATCCTGGAAATTCGACACAATTAGATTTGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR TCA 90 bp TTGGAGGAAAAGTTGCTCCCTTTCAGCCCTCCTACTAGAAGCACTGGAGCTAGGATGACTAGCAAGAGTTaGAGACCTTTACTGTTGAAA +
Preference number: 4 (lower is better)
Translates to: LEEKLLPFSPPTRSTGARMTSKS*RPLLLK
Trigger: TTTCAACAGTAAAGGTCTTCAACTCTTGCTAGTCAT...CCTAGCTCCAGTGCTTCTAGTAGGAGGGCTGAAAGGGAGCAACTTTTCCTCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647789.2
CDS-3UTR TCA 90 bp TTGGAGGAAAAGTTGCTCCCTTTCAGCCCTCCTACTAGAAGCACTGGAGCTAGGGCTGGCTTCGTATTGTaGATGGCTTTAATTTTCAAA +
Preference number: 4 (lower is better)
Translates to: LEEKLLPFSPPTRSTGARAGFVL*MALIFK
Trigger: TTTGAAAATTAAAGCCATTCACAATACGAAGCCAGC...CCTAGCTCCAGTGCTTCTAGTAGGAGGGCTGAAAGGGAGCAACTTTTCCTCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647789.2
CDS-3UTR GCA 90 bp TGCCACATTTTCAAATGCCTAATAGACACTATCGGTAGATACCTTCTTGGCCCAACCTACAGATTCATCTaGAGCCAGGATCCCCTTTCC +
Preference number: 4 (lower is better)
Translates to: CHIFKCLIDTIGRYLLGPTYRFI*SQDPLS
Trigger: GGAAAGGGGATCCTGGCTGCAGATGAATCTGTAGGT...TGGGCCAAGAAGGTATCTACCGATAGTGTCTATTAGGCATTTGAAAATGTGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649902.1
CDS-3UTR GCA 90 bp AGCAGTTCAAATCTAATTGTGTCGAATTTCCAGGATTGGAGGAAAAGTTGCTCCAGGATTTCTCGGAACTaGCGGCGGTTCTCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: SSSNLIVSNFQDWRKSCSRISRN*RRFSSV
Trigger: CACTGAAGAGAACCGCCGGCAGTTCCGAGAAATCCT...GGAGCAACTTTTCCTCCAATCCTGGAAATTCGACACAATTAGATTTGAACTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR GCA 90 bp CTTCCCAAAATAAAAAGTATCCTAGGTTCAGTTCTTGGTCCTCTTATCTCCTTCGATGCCAGGAACAGCTaGAGGAACAGTACGGTGGAG +
Preference number: 4 (lower is better)
Translates to: LPKIKSILGSVLGPLISFDARNS*RNSTVE
Trigger: CTCCACCGTACTGTTCCTGCAGCTGTTCCTGGCATC...GAAGGAGATAAGAGGACCAAGAACTGAACCTAGGATACTTTTTATTTTGGGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649902.1
CDS-3UTR GCA 90 bp CAATCAGCAGTTGTTCTTTGGATGAGGAGCCGATATTGTTTTAAAGCCTATTATGGAGCCAACACTTGCTaGGCATCAGTGAGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: QSAVVLWMRSRYCFKAYYGANTC*ASVSRA
Trigger: GGCTCTGCTCACTGATGCGCAGCAAGTGTTGGCTCC...ATAATAGGCTTTAAAACAATATCGGCTCCTCATCCAAAGAACAACTGCTGATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648064.1
CDS-3UTR CCA 90 bp CACATTTTCAAATGCCTAATAGACACTATCGGTAGATACCTTCTTGGCCCAAAGGCAGGCGGTTCCCCATaGTACCTACAGATTCATCTG +
Preference number: 4 (lower is better)
Translates to: HIFKCLIDTIGRYLLGPKAGGSP*YLQIHL
Trigger: CAGATGAATCTGTAGGTACCATGGGGAACCGCCTGC...CTTTGGGCCAAGAAGGTATCTACCGATAGTGTCTATTAGGCATTTGAAAATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649902.1
CDS-3UTR CCA 90 bp CCCAAAATAAAAAGTATCCTAGGTTCAGTTCTTGGTCCTCTTATCTCCTTCCCTACACCCCCGATGCTCTaGTTGATGGAACTGTCCACA +
Preference number: 4 (lower is better)
Translates to: PKIKSILGSVLGPLISFPTPPML*LMELST
Trigger: TGTGGACAGTTCCATCAACCAGAGCATCGGGGGTGT...AGGGAAGGAGATAAGAGGACCAAGAACTGAACCTAGGATACTTTTTATTTTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000649902.1
CDS-3UTR CCA 90 bp AGTTCAAATCTAATTGTGTCGAATTTCCAGGATTGGAGGAAAAGTTGCTCCCTTGATAGCGAGGCTGGATaGACACTGGTCGGCAATCCT +
Preference number: 4 (lower is better)
Translates to: SSNLIVSNFQDWRKSCSLDSEAG*TLVGNP
Trigger: AGGATTGCCGACCAGTGTCCATCCAGCCTCGCTATC...AAGGGAGCAACTTTTCCTCCAATCCTGGAAATTCGACACAATTAGATTTGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR CCA 90 bp AGTTCAAATCTAATTGTGTCGAATTTCCAGGATTGGAGGAAAAGTTGCTCCCTTGCGTTGGCGTTTTCCTaGATAGCGAGGCTGGATGGA +
Preference number: 4 (lower is better)
Translates to: SSNLIVSNFQDWRKSCSLALAFS*IARLDG
Trigger: TCCATCCAGCCTCGCTATCCAGGAAAACGCCAACGC...AAGGGAGCAACTTTTCCTCCAATCCTGGAAATTCGACACAATTAGATTTGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR CCA 90 bp AATCTAATTGTGTCGAATTTCCAGGATTGGAGGAAAAGTTGCTCCCTTTCAGCCCTGGAGTATACTTCTTaGTGCAGGCATGTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: NLIVSNFQDWRKSCSLSALEYTS*CRHVQQ
Trigger: CTGCTGGACATGCCTGCACCAAGAAGTATACTCCAG...GGCTGAAAGGGAGCAACTTTTCCTCCAATCCTGGAAATTCGACACAATTAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR CCA 90 bp CCTATTATTTTCTTGGGTGGGTATTCTGGAGCATGGGGAGCTGAAAGTGTTGCATTCATAAAAGCCTCCTaGGTTGCCTCCTTGTTTGCA +
Preference number: 4 (lower is better)
Translates to: PIIFLGGYSGAWGAESVAFIKAS*VASLFA
Trigger: TGCAAACAAGGAGGCAACCCAGGAGGCTTTTATGAA...TGCAACACTTTCAGCTCCCCATGCTCCAGAATACCCACCCAAGAAAATAATAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000647789.2
ENST00000648064.1
CDS-3UTR CCA 90 bp AACATGTGTTGTATTTCCAGCAGTTCAAATCTAATTGTGTCGAATTTCCAGGATGCACTGGAGCTAGGCTaGCGGGCATTGGACCCTAGT +
Preference number: 4 (lower is better)
Translates to: NMCCISSSSNLIVSNFQDALELG*RALDPS
Trigger: ACTAGGGTCCAATGCCCGCCAGCCTAGCTCCAGTGC...ATCCTGGAAATTCGACACAATTAGATTTGAACTGCTGGAAATACAACACATGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR CCA 90 bp GTGTCGAATTTCCAGGATTGGAGGAAAAGTTGCTCCCTTTCAGCCCTCCTACTATCGAATTTCCAGGATTaGAGGAAAAGTTGCTCCCTT +
Preference number: 4 (lower is better)
Translates to: VSNFQDWRKSCSLSALLLSNFQD*RKSCSL
Trigger: AAGGGAGCAACTTTTCCTCCAATCCTGGAAATTCGA...TAGTAGGAGGGCTGAAAGGGAGCAACTTTTCCTCCAATCCTGGAAATTCGACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR CCA 90 bp GGGTATTCTGGAGCATGGGGAGCTGAAAGTGTTGCAAGGAAACTGCTGTGTGAAAGCCTATTATTTTCTTaGGTGGGTATTCTGGAGCAT +
Preference number: 4 (lower is better)
Translates to: GYSGAWGAESVARKLLCESLLFS*VGILEH
Trigger: ATGCTCCAGAATACCCACCCAAGAAAATAATAGGCT...TTCACACAGCAGTTTCCTTGCAACACTTTCAGCTCCCCATGCTCCAGAATACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647789.2
ENST00000648064.1
CDS-3UTR TCA 90 bp AGCAGTTCAAATCTAATTGTGTCGAATTTCCAGGATTGGAGGAAAAGTTGCTCCATCAAAAGCTGTGGGTaGGGCAGCAGCTGCCAAATA +
Preference number: 4 (lower is better)
Translates to: SSSNLIVSNFQDWRKSCSIKSCG*GSSCQI
Trigger: TATTTGGCAGCTGCTGCCTCACCCACAGCTTTTGAT...GGAGCAACTTTTCCTCCAATCCTGGAAATTCGACACAATTAGATTTGAACTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000616752.1
ENST00000647789.2
CDS-3UTR TCA 90 bp TTGTATTTCCAGCAGTTCAAATCTAATTGTGTCGAATTTCCAGGATTGGAGGAAATCGGTGGGCCATGGTaGCAGGTAGTTTGGGAGAGA +
Preference number: 4 (lower is better)
Translates to: LYFQQFKSNCVEFPGLEEIGGPW*QVVWER
Trigger: TCTCTCCCAAACTACCTGTCACCATGGCCCACCGAT...TTCCTCCAATCCTGGAAATTCGACACAATTAGATTTGAACTGCTGGAAATACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616752.1
ENST00000647789.2
CDS-3UTR TCA 90 bp TATTTCCAGCAGTTCAAATCTAATTGTGTCGAATTTCCAGGATTGGAGGAAAAGCAGTGTTTTCCACCTTaGTCCTCTGCAGGCGGTTCC +
Preference number: 4 (lower is better)
Translates to: YFQQFKSNCVEFPGLEEKQCFPP*SSAGGS
Trigger: GGAACCGCCTGCAGAGGATCAAGGTGGAAAACACTG...CTTTTCCTCCAATCCTGGAAATTCGACACAATTAGATTTGAACTGCTGGAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR TCA 90 bp ATTTCCAGCAGTTCAAATCTAATTGTGTCGAATTTCCAGGATTGGAGGAAAAGTCAGTGTTTTCCACCTTaGTCCTCTGCAGGCGGTTCC +
Preference number: 4 (lower is better)
Translates to: ISSSSNLIVSNFQDWRKSQCFPP*SSAGGS
Trigger: GGAACCGCCTGCAGAGGATCAAGGTGGAAAACACTG...ACTTTTCCTCCAATCCTGGAAATTCGACACAATTAGATTTGAACTGCTGGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR TCA 90 bp GTGTCGAATTTCCAGGATTGGAGGAAAAGTTGCTCCCTTTCAGCCCTCCTACTACAGTTGTTCTTTGGATaGGGAGCCGATATTGTTTTA +
Preference number: 4 (lower is better)
Translates to: VSNFQDWRKSCSLSALLLQLFFG*GADIVL
Trigger: TAAAACAATATCGGCTCCTCATCCAAAGAACAACTG...TAGTAGGAGGGCTGAAAGGGAGCAACTTTTCCTCCAATCCTGGAAATTCGACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647789.2
ENST00000648064.1
CDS-3UTR GCA 90 bp AATGCTTGGTTCACCCTACAATATAATCGCTGCTTTTCTTGGTTGCTTCTCTTCTGGGCTTTAGCAGGGTaGCCTCCAGGTAAACATGAT +
Preference number: 4 (lower is better)
Translates to: NAWFTLQYNRCFSWLLLFWALAG*PPGKHD
Trigger: ATCATGTTTACCTGGAGGGCACCCTGCTAAAGCCCA...GAAGAGAAGCAACCAAGAAAAGCAGCGATTATATTGTAGGGTGAACCAAGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649902.1
CDS-3UTR GCA 90 bp AATCTAATTGTGTCGAATTTCCAGGATTGGAGGAAAAGTTGCTCCCTTTCAGCCGAGTATACTTCTTGGTaGAGGCATGTCCAGCAGTCA +
Preference number: 4 (lower is better)
Translates to: NLIVSNFQDWRKSCSLSAEYTSW*RHVQQS
Trigger: TGACTGCTGGACATGCCTGCACCAAGAAGTATACTC...GGCTGAAAGGGAGCAACTTTTCCTCCAATCCTGGAAATTCGACACAATTAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR GCA 90 bp TTGTATTTCCAGCAGTTCAAATCTAATTGTGTCGAATTTCCAGGATTGGAGGAAGATGCCAGGAACAGCTaGAGGAACAGTACGGTGGAG +
Preference number: 4 (lower is better)
Translates to: LYFQQFKSNCVEFPGLEEDARNS*RNSTVE
Trigger: CTCCACCGTACTGTTCCTGCAGCTGTTCCTGGCATC...TTCCTCCAATCCTGGAAATTCGACACAATTAGATTTGAACTGCTGGAAATACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR CCA 90 bp CAGCAGTTCAAATCTAATTGTGTCGAATTTCCAGGATTGGAGGAAAAGTTGCTCAGATATCAAAAGCTGTaGGTGAGGCAGCAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: QQFKSNCVEFPGLEEKLLRYQKL*VRQQLP
Trigger: TGGCAGCTGCTGCCTCACCCACAGCTTTTGATATCT...GAGCAACTTTTCCTCCAATCCTGGAAATTCGACACAATTAGATTTGAACTGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000616752.1
ENST00000647789.2
CDS-3UTR CCA 90 bp AAAAGTATCCTAGGTTCAGTTCTTGGTCCTCTTATCTCCTTCCCTCTGAAGTGTTTGGCAACAATGCTCTaGGCAATTTCTGAGAGCTCC +
Preference number: 4 (lower is better)
Translates to: KSILGSVLGPLISFPLKCLATML*AISESS
Trigger: GGAGCTCTCAGAAATTGCCCAGAGCATTGTTGCCAA...ACACTTCAGAGGGAAGGAGATAAGAGGACCAAGAACTGAACCTAGGATACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649902.1
CDS-3UTR CCA 90 bp AGTTCAAATCTAATTGTGTCGAATTTCCAGGATTGGAGGAAAAGTTGCTCCCTTGCAGGCGGTTCCCCATaGTACCTACAGATTCATCTG +
Preference number: 4 (lower is better)
Translates to: SSNLIVSNFQDWRKSCSLAGGSP*YLQIHL
Trigger: CAGATGAATCTGTAGGTACCATGGGGAACCGCCTGC...AAGGGAGCAACTTTTCCTCCAATCCTGGAAATTCGACACAATTAGATTTGAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR CCA 90 bp AAATCTAATTGTGTCGAATTTCCAGGATTGGAGGAAAAGTTGCTCCCTTTCAGCAGAGGAGCACCTCCTTaGTCTAACTTGATTCCCACC +
Preference number: 4 (lower is better)
Translates to: KSNCVEFPGLEEKLLPFSRGAPP*SNLIPT
Trigger: GGTGGGAATCAAGTTAGACCAAGGAGGTGCTCCTCT...GCTGAAAGGGAGCAACTTTTCCTCCAATCCTGGAAATTCGACACAATTAGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR CCA 90 bp AATGCTTGGTTCACCCTACAATATAATCGCTGCTTTTCTTGGTTGCTTCTCTTCAGAGGAGCACCTCCTTaGTCTAACTTGATTCCCACC +
Preference number: 4 (lower is better)
Translates to: NAWFTLQYNRCFSWLLLFRGAPP*SNLIPT
Trigger: GGTGGGAATCAAGTTAGACCAAGGAGGTGCTCCTCT...GAAGAGAAGCAACCAAGAAAAGCAGCGATTATATTGTAGGGTGAACCAAGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649902.1
CDS-3UTR CCA 90 bp AACATGTGTTGTATTTCCAGCAGTTCAAATCTAATTGTGTCGAATTTCCAGGATGCAGGAACAGTACGGTaGAGAGCTGTTACGGTGGCC +
Preference number: 4 (lower is better)
Translates to: NMCCISSSSNLIVSNFQDAGTVR*RAVTVA
Trigger: GGCCACCGTAACAGCTCTCCACCGTACTGTTCCTGC...ATCCTGGAAATTCGACACAATTAGATTTGAACTGCTGGAAATACAACACATGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR CCA 90 bp AACATGTGTTGTATTTCCAGCAGTTCAAATCTAATTGTGTCGAATTTCCAGGATAGGGCTGGAAATCGGTaGGCCATGGTGACAGGTCTG +
Preference number: 4 (lower is better)
Translates to: NMCCISSSSNLIVSNFQDRAGNR*AMVTGL
Trigger: CAGACCTGTCACCATGGCCCACCGATTTCCAGCCCT...ATCCTGGAAATTCGACACAATTAGATTTGAACTGCTGGAAATACAACACATGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648064.1
CDS-3UTR CCA 90 bp TTGGAGGAAAAGTTGCTCCCTTTCAGCCCTCCTACTAGAAGCACTGGAGCTAGGAAATCTTCAGAATGCTaGTATGTATGGAAGAAACAG +
Preference number: 4 (lower is better)
Translates to: LEEKLLPFSPPTRSTGARKSSEC*YVWKKQ
Trigger: CTGTTTCTTCCATACATACCAGCATTCTGAAGATTT...CCTAGCTCCAGTGCTTCTAGTAGGAGGGCTGAAAGGGAGCAACTTTTCCTCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648758.1
3UTR CAA 72 bp CAGCAGTTCAAATCTAATTGTGTCGAATTTCCAGGATaGGAGGAAAAGTTGCTCCCTTTCAGCCCTCCTACT +
Preference number: 4 (lower is better)
Translates to: QQFKSNCVEFPG*EEKLLPFSPPT
Trigger: AGTAGGAGGGCTGAAAGGGAGCAACTTTTCCTCCAATCCTGGAAATTCGACACAATTAGATTTGAACTGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR TCA 90 bp AATCTAATTGTGTCGAATTTCCAGGATTGGAGGAAAAGTTGCTCCCTTTCAGCCAGGCCATCAAGCCCTTaGATGGTGGTTTCTTTGTTT +
Preference number: 4 (lower is better)
Translates to: NLIVSNFQDWRKSCSLSARPSSP*MVVSLF
Trigger: AAACAAAGAAACCACCATTCAAGGGCTTGATGGCCT...GGCTGAAAGGGAGCAACTTTTCCTCCAATCCTGGAAATTCGACACAATTAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR TCA 90 bp AACATGTGTTGTATTTCCAGCAGTTCAAATCTAATTGTGTCGAATTTCCAGGATAGGTATAGCAGGCTGTaGAGAGCGACTGGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: NMCCISSSSNLIVSNFQDRYSRL*RATGWK
Trigger: CTTCCACCCAGTCGCTCTTCACAGCCTGCTATACCT...ATCCTGGAAATTCGACACAATTAGATTTGAACTGCTGGAAATACAACACATGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR TCA 90 bp CAGCAGTTCAAATCTAATTGTGTCGAATTTCCAGGATTGGAGGAAAAGTTGCTCAGCTGGGGTGTGGCCTaGGCATCTCAGTTTTTAAAA +
Preference number: 4 (lower is better)
Translates to: QQFKSNCVEFPGLEEKLLSWGVA*ASQFLK
Trigger: TTTTAAAAACTGAGATGCTCAGGCCACACCCCAGCT...GAGCAACTTTTCCTCCAATCCTGGAAATTCGACACAATTAGATTTGAACTGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000647789.2
CDS-3UTR TCA 90 bp AAAAGTATCCTAGGTTCAGTTCTTGGTCCTCTTATCTCCTTCCCTCTGAAGTGTCCTCAATCCTCATACTaGCCTCTACTGCCACATTTT +
Preference number: 4 (lower is better)
Translates to: KSILGSVLGPLISFPLKCPQSSY*PLLPHF
Trigger: AAAATGTGGCAGTAGAGGTCAGTATGAGGATTGAGG...ACACTTCAGAGGGAAGGAGATAAGAGGACCAAGAACTGAACCTAGGATACTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649902.1
CDS-3UTR GCA 90 bp ATGTGTTGTATTTCCAGCAGTTCAAATCTAATTGTGTCGAATTTCCAGGATTGGAGGATTTCTCGGAACTaGCGGCGGTTCTCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: MCCISSSSNLIVSNFQDWRISRN*RRFSSV
Trigger: CACTGAAGAGAACCGCCGGCAGTTCCGAGAAATCCT...CCAATCCTGGAAATTCGACACAATTAGATTTGAACTGCTGGAAATACAACACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR GCA 90 bp CTTCAGTCTCCTGTCATCAACTATACTCTAGTGTGGATAATTCAAAATTCTCTCAGGATTTCTCGGAACTaGCGGCGGTTCTCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: LQSPVINYTLVWIIQNSLRISRN*RRFSSV
Trigger: CACTGAAGAGAACCGCCGGCAGTTCCGAGAAATCCT...GAGAGAATTTTGAATTATCCACACTAGAGTATAGTTGATGACAGGAGACTGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649902.1
CDS-3UTR GCA 90 bp TGTTGTATTTCCAGCAGTTCAAATCTAATTGTGTCGAATTTCCAGGATTGGAGGTGGGCTTTAGCAGGGTaGCCTCCAGGTAAACATGAT +
Preference number: 4 (lower is better)
Translates to: CCISSSSNLIVSNFQDWRWALAG*PPGKHD
Trigger: ATCATGTTTACCTGGAGGGCACCCTGCTAAAGCCCA...CCTCCAATCCTGGAAATTCGACACAATTAGATTTGAACTGCTGGAAATACAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR GCA 90 bp TGTTTCATAAGATGCACTTCTCTACACTCAGCTAATGAGGTGTTTCAATCAGCATGGGCTTTAGCAGGGTaGCCTCCAGGTAAACATGAT +
Preference number: 4 (lower is better)
Translates to: CFIRCTSLHSANEVFQSAWALAG*PPGKHD
Trigger: ATCATGTTTACCTGGAGGGCACCCTGCTAAAGCCCA...TGCTGATTGAAACACCTCATTAGCTGAGTGTAGAGAAGTGCATCTTATGAAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647789.2
ENST00000648064.1
CDS-3UTR GCA 90 bp TTCAAATCTAATTGTGTCGAATTTCCAGGATTGGAGGAAAAGTTGCTCCCTTTCTGGGCTTTAGCAGGGTaGCCTCCAGGTAAACATGAT +
Preference number: 4 (lower is better)
Translates to: FKSNCVEFPGLEEKLLPFWALAG*PPGKHD
Trigger: ATCATGTTTACCTGGAGGGCACCCTGCTAAAGCCCA...GAAAGGGAGCAACTTTTCCTCCAATCCTGGAAATTCGACACAATTAGATTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR GCA 90 bp CCTATTATTTTCTTGGGTGGGTATTCTGGAGCATGGGGAGCTGAAAGTGTTGCAGTGTTGCAAGGAAACTaGTGTGTGAAATTTGATCAG +
Preference number: 4 (lower is better)
Translates to: PIIFLGGYSGAWGAESVAVLQGN*CVKFDQ
Trigger: CTGATCAAATTTCACACAGCAGTTTCCTTGCAACAC...TGCAACACTTTCAGCTCCCCATGCTCCAGAATACCCACCCAAGAAAATAATAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647789.2
ENST00000648064.1
CDS-3UTR GCA 90 bp AACATGTGTTGTATTTCCAGCAGTTCAAATCTAATTGTGTCGAATTTCCAGGATGTGGGAGCCAACACTTaGTGCGCATCAGTGAGCAGA +
Preference number: 4 (lower is better)
Translates to: NMCCISSSSNLIVSNFQDVGANT*CASVSR
Trigger: TCTGCTCACTGATGCGCAGCAAGTGTTGGCTCCCAC...ATCCTGGAAATTCGACACAATTAGATTTGAACTGCTGGAAATACAACACATGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648064.1
CDS-3UTR GCA 90 bp CTAATTGTGTCGAATTTCCAGGATTGGAGGAAAAGTTGCTCCCTTTCAGCCCTCGACTGTTTCATAAGATaGACTTCTCTACACTCAGCT +
Preference number: 4 (lower is better)
Translates to: LIVSNFQDWRKSCSLSALDCFIR*TSLHSA
Trigger: AGCTGAGTGTAGAGAAGTGCATCTTATGAAACAGTC...GAGGGCTGAAAGGGAGCAACTTTTCCTCCAATCCTGGAAATTCGACACAATTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647789.2
ENST00000648064.1
CDS-3UTR CCA 90 bp TGCCACATTTTCAAATGCCTAATAGACACTATCGGTAGATACCTTCTTGGCCCATTCTCAGTAACATACTaGCAGTGTTCCAGGTCATGG +
Preference number: 4 (lower is better)
Translates to: CHIFKCLIDTIGRYLLGPFSVTY*QCSRSW
Trigger: CCATGACCTGGAACACTGCCAGTATGTTACTGAGAA...TGGGCCAAGAAGGTATCTACCGATAGTGTCTATTAGGCATTTGAAAATGTGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649902.1
CDS-3UTR CCA 90 bp TGTTTCATAAGATGCACTTCTCTACACTCAGCTAATGAGGTGTTTCAATCAGCAAGATATCAAAAGCTGTaGGTGAGGCAGCAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: CFIRCTSLHSANEVFQSARYQKL*VRQQLP
Trigger: TGGCAGCTGCTGCCTCACCCACAGCTTTTGATATCT...TGCTGATTGAAACACCTCATTAGCTGAGTGTAGAGAAGTGCATCTTATGAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647789.2
CDS-3UTR CCA 90 bp AAATCTAATTGTGTCGAATTTCCAGGATTGGAGGAAAAGTTGCTCCCTTTCAGCTTGGCAACAATGCTCTaGGCAATTTCTGAGAGCTCC +
Preference number: 4 (lower is better)
Translates to: KSNCVEFPGLEEKLLPFSLATML*AISESS
Trigger: GGAGCTCTCAGAAATTGCCCAGAGCATTGTTGCCAA...GCTGAAAGGGAGCAACTTTTCCTCCAATCCTGGAAATTCGACACAATTAGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR CCA 90 bp AGCAGTTCAAATCTAATTGTGTCGAATTTCCAGGATTGGAGGAAAAGTTGCTCCTTGGCAACAATGCTCTaGGCAATTTCTGAGAGCTCC +
Preference number: 4 (lower is better)
Translates to: SSSNLIVSNFQDWRKSCSLATML*AISESS
Trigger: GGAGCTCTCAGAAATTGCCCAGAGCATTGTTGCCAA...GGAGCAACTTTTCCTCCAATCCTGGAAATTCGACACAATTAGATTTGAACTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR CCA 90 bp AGTTCAAATCTAATTGTGTCGAATTTCCAGGATTGGAGGAAAAGTTGCTCCCTTGGATCCCCTTTCCATTaGCAACAATGCTCTGGGCAA +
Preference number: 4 (lower is better)
Translates to: SSNLIVSNFQDWRKSCSLGSPFH*QQCSGQ
Trigger: TTGCCCAGAGCATTGTTGCCAATGGAAAGGGGATCC...AAGGGAGCAACTTTTCCTCCAATCCTGGAAATTCGACACAATTAGATTTGAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR CCA 90 bp CAAAATAAAAAGTATCCTAGGTTCAGTTCTTGGTCCTCTTATCTCCTTCCCTCTGGATCCCCTTTCCATTaGCAACAATGCTCTGGGCAA +
Preference number: 4 (lower is better)
Translates to: QNKKYPRFSSWSSYLLPSGSPFH*QQCSGQ
Trigger: TTGCCCAGAGCATTGTTGCCAATGGAAAGGGGATCC...AGAGGGAAGGAGATAAGAGGACCAAGAACTGAACCTAGGATACTTTTTATTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000649902.1
CDS-3UTR CCA 90 bp CAAAATAAAAAGTATCCTAGGTTCAGTTCTTGGTCCTCTTATCTCCTTCCCTCTCTGGAGTATACTTCTTaGTGCAGGCATGTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: QNKKYPRFSSWSSYLLPSLEYTS*CRHVQQ
Trigger: CTGCTGGACATGCCTGCACCAAGAAGTATACTCCAG...AGAGGGAAGGAGATAAGAGGACCAAGAACTGAACCTAGGATACTTTTTATTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649902.1
CDS-3UTR CCA 90 bp CAAAGAAAACAATGCTTCTCCGTGTTGGAAAGTCAAGCCCCAAATGTGAACATCTTCATAAAAGCCTCCTaGGTTGCCTCCTTGTTTGCA +
Preference number: 4 (lower is better)
Translates to: QRKQCFSVLESQAPNVNIFIKAS*VASLFA
Trigger: TGCAAACAAGGAGGCAACCCAGGAGGCTTTTATGAA...GATGTTCACATTTGGGGCTTGACTTTCCAACACGGAGAAGCATTGTTTTCTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000649902.1
CDS-3UTR CCA 90 bp CACATTTTCAAATGCCTAATAGACACTATCGGTAGATACCTTCTTGGCCCAAAGCAAGTAGATAAGAGGTaGCAGCATCTTACCATGGCC +
Preference number: 4 (lower is better)
Translates to: HIFKCLIDTIGRYLLGPKQVDKR*QHLTMA
Trigger: GGCCATGGTAAGATGCTGCCACCTCTTATCTACTTG...CTTTGGGCCAAGAAGGTATCTACCGATAGTGTCTATTAGGCATTTGAAAATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649902.1
CDS-3UTR TCA 90 bp AAATCTAATTGTGTCGAATTTCCAGGATTGGAGGAAAAGTTGCTCCCTTTCAGCAGGCCATCAAGCCCTTaGATGGTGGTTTCTTTGTTT +
Preference number: 4 (lower is better)
Translates to: KSNCVEFPGLEEKLLPFSRPSSP*MVVSLF
Trigger: AAACAAAGAAACCACCATTCAAGGGCTTGATGGCCT...GCTGAAAGGGAGCAACTTTTCCTCCAATCCTGGAAATTCGACACAATTAGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR TCA 90 bp CCCAAAATAAAAAGTATCCTAGGTTCAGTTCTTGGTCCTCTTATCTCCTTCCCTAGGCCATCAAGCCCTTaGATGGTGGTTTCTTTGTTT +
Preference number: 4 (lower is better)
Translates to: PKIKSILGSVLGPLISFPRPSSP*MVVSLF
Trigger: AAACAAAGAAACCACCATTCAAGGGCTTGATGGCCT...AGGGAAGGAGATAAGAGGACCAAGAACTGAACCTAGGATACTTTTTATTTTGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649902.1
CDS-3UTR TCA 90 bp ATTGTGTCGAATTTCCAGGATTGGAGGAAAAGTTGCTCCCTTTCAGCCCTCCTAGGTAGTTCTCAAACTTaGCTGTACATTGGAATTACT +
Preference number: 4 (lower is better)
Translates to: IVSNFQDWRKSCSLSALLGSSQT*LYIGIT
Trigger: AGTAATTCCAATGTACAGTCAAGTTTGAGAACTACC...TAGGAGGGCTGAAAGGGAGCAACTTTTCCTCCAATCCTGGAAATTCGACACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647789.2
CDS-3UTR GCA 90 bp AAATCTAATTGTGTCGAATTTCCAGGATTGGAGGAAAAGTTGCTCCCTTTCAGCTTCTTTGTTTGTTCCTaGAAGAGGAGCACCTCCTTG +
Preference number: 4 (lower is better)
Translates to: KSNCVEFPGLEEKLLPFSFFVCS*KRSTSL
Trigger: CAAGGAGGTGCTCCTCTTGCAGGAACAAACAAAGAA...GCTGAAAGGGAGCAACTTTTCCTCCAATCCTGGAAATTCGACACAATTAGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR GCA 90 bp GTCTCCTGTCATCAACTATACTCTAGTGTGGATAATTCAAAATTCTCTCTAGCCGAGTATACTTCTTGGTaGAGGCATGTCCAGCAGTCA +
Preference number: 4 (lower is better)
Translates to: VSCHQLYSSVDNSKFSLAEYTSW*RHVQQS
Trigger: TGACTGCTGGACATGCCTGCACCAAGAAGTATACTC...GGCTAGAGAGAATTTTGAATTATCCACACTAGAGTATAGTTGATGACAGGAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649902.1
CDS-3UTR GCA 90 bp TGTTGTATTTCCAGCAGTTCAAATCTAATTGTGTCGAATTTCCAGGATTGGAGGCAGACAAAAAGCAGATaGCAGGAACAGCTGCAGGAA +
Preference number: 4 (lower is better)
Translates to: CCISSSSNLIVSNFQDWRQTKSR*QEQLQE
Trigger: TTCCTGCAGCTGTTCCTGGCATCTGCTTTTTGTCTG...CCTCCAATCCTGGAAATTCGACACAATTAGATTTGAACTGCTGGAAATACAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR GCA 90 bp CTTCCCAAAATAAAAAGTATCCTAGGTTCAGTTCTTGGTCCTCTTATCTCCTTCCAGACAAAAAGCAGATaGCAGGAACAGCTGCAGGAA +
Preference number: 4 (lower is better)
Translates to: LPKIKSILGSVLGPLISFQTKSR*QEQLQE
Trigger: TTCCTGCAGCTGTTCCTGGCATCTGCTTTTTGTCTG...GAAGGAGATAAGAGGACCAAGAACTGAACCTAGGATACTTTTTATTTTGGGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000649902.1
CDS-3UTR CCA 90 bp TTCAAATCTAATTGTGTCGAATTTCCAGGATTGGAGGAAAAGTTGCTCCCTTTCCAGTGTTCCAGGTCATaGTCTCCATCAGGAATTACC +
Preference number: 4 (lower is better)
Translates to: FKSNCVEFPGLEEKLLPFQCSRS*SPSGIT
Trigger: GGTAATTCCTGATGGAGACCATGACCTGGAACACTG...GAAAGGGAGCAACTTTTCCTCCAATCCTGGAAATTCGACACAATTAGATTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR CCA 90 bp TTGTATTTCCAGCAGTTCAAATCTAATTGTGTCGAATTTCCAGGATTGGAGGAAGGATCCCCTTTCCATTaGCAACAATGCTCTGGGCAA +
Preference number: 4 (lower is better)
Translates to: LYFQQFKSNCVEFPGLEEGSPFH*QQCSGQ
Trigger: TTGCCCAGAGCATTGTTGCCAATGGAAAGGGGATCC...TTCCTCCAATCCTGGAAATTCGACACAATTAGATTTGAACTGCTGGAAATACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR CCA 90 bp AACATGTGTTGTATTTCCAGCAGTTCAAATCTAATTGTGTCGAATTTCCAGGATACACCCCCGATGCTCTaGTTGATGGAACTGTCCACA +
Preference number: 4 (lower is better)
Translates to: NMCCISSSSNLIVSNFQDTPPML*LMELST
Trigger: TGTGGACAGTTCCATCAACCAGAGCATCGGGGGTGT...ATCCTGGAAATTCGACACAATTAGATTTGAACTGCTGGAAATACAACACATGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR CCA 90 bp GTGTTTCAATCAGCAGTTGTTCTTTGGATGAGGAGCCGATATTGTTTTAAAGCCTTCATAAAAGCCTCCTaGGTTGCCTCCTTGTTTGCA +
Preference number: 4 (lower is better)
Translates to: VFQSAVVLWMRSRYCFKAFIKAS*VASLFA
Trigger: TGCAAACAAGGAGGCAACCCAGGAGGCTTTTATGAA...GGCTTTAAAACAATATCGGCTCCTCATCCAAAGAACAACTGCTGATTGAAACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647789.2
ENST00000648064.1
CDS-3UTR CCA 90 bp GCACTTCTCTACACTCAGCTAATGAGGTGTTTCAATCAGCAGTTGTTCTTTGGATCAGCAGTTGTTCTTTaGATGAGGAGCCGATATTGT +
Preference number: 4 (lower is better)
Translates to: ALLYTQLMRCFNQQLFFGSAVVL*MRSRYC
Trigger: ACAATATCGGCTCCTCATCCAAAGAACAACTGCTGA...TCCAAAGAACAACTGCTGATTGAAACACCTCATTAGCTGAGTGTAGAGAAGTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647789.2
ENST00000648064.1
CDS-3UTR TCA 90 bp GTGTTTCAATCAGCAGTTGTTCTTTGGATGAGGAGCCGATATTGTTTTAAAGCCAAGGAAACTGCTGTGTaGAATTTGATCAGGTCCTTG +
Preference number: 4 (lower is better)
Translates to: VFQSAVVLWMRSRYCFKAKETAV*NLIRSL
Trigger: CAAGGACCTGATCAAATTTCACACAGCAGTTTCCTT...GGCTTTAAAACAATATCGGCTCCTCATCCAAAGAACAACTGCTGATTGAAACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647789.2
ENST00000648064.1
CDS-3UTR TCA 90 bp AACATGTGTTGTATTTCCAGCAGTTCAAATCTAATTGTGTCGAATTTCCAGGATTGGAGCATGGGGAGCTaGAAGTGTTGCAAGGAAACT +
Preference number: 4 (lower is better)
Translates to: NMCCISSSSNLIVSNFQDWSMGS*KCCKET
Trigger: AGTTTCCTTGCAACACTTTCAGCTCCCCATGCTCCA...ATCCTGGAAATTCGACACAATTAGATTTGAACTGCTGGAAATACAACACATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
CDS-3UTR TCA 90 bp AATCTAATTGTGTCGAATTTCCAGGATTGGAGGAAAAGTTGCTCCCTTTCAGCCAGTAATGAAATACACTaGGTCTTTGGACAGCAAGAG +
Preference number: 4 (lower is better)
Translates to: NLIVSNFQDWRKSCSLSASNEIH*VFGQQE
Trigger: CTCTTGCTGTCCAAAGACTCAGTGTATTTCATTACT...GGCTGAAAGGGAGCAACTTTTCCTCCAATCCTGGAAATTCGACACAATTAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647789.2
CDS-3UTR TCA 90 bp CCCAAAATAAAAAGTATCCTAGGTTCAGTTCTTGGTCCTCTTATCTCCTTCCCTCTGAAGTGTTTCTGTTaGAATTGTCCTTCAGTCTCC +
Preference number: 4 (lower is better)
Translates to: PKIKSILGSVLGPLISFPLKCFC*NCPSVS
Trigger: GGAGACTGAAGGACAATTTCAACAGAAACACTTCAG...AGGGAAGGAGATAAGAGGACCAAGAACTGAACCTAGGATACTTTTTATTTTGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649902.1
CDS-3UTR GCA 90 bp CAGTTCAAATCTAATTGTGTCGAATTTCCAGGATTGGAGGAAAAGTTGCTCCCTTTCCATTGGCAACAATaGTCTGGGCAATTTCTGAGA +
Preference number: 4 (lower is better)
Translates to: QFKSNCVEFPGLEEKLLPFHWQQ*SGQFLR
Trigger: TCTCAGAAATTGCCCAGAGCATTGTTGCCAATGGAA...AGGGAGCAACTTTTCCTCCAATCCTGGAAATTCGACACAATTAGATTTGAACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR GCA 90 bp TGTTTCATAAGATGCACTTCTCTACACTCAGCTAATGAGGTGTTTCAATCAGCATTCTTTGTTTGTTCCTaGAAGAGGAGCACCTCCTTG +
Preference number: 4 (lower is better)
Translates to: CFIRCTSLHSANEVFQSAFFVCS*KRSTSL
Trigger: CAAGGAGGTGCTCCTCTTGCAGGAACAAACAAAGAA...TGCTGATTGAAACACCTCATTAGCTGAGTGTAGAGAAGTGCATCTTATGAAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647789.2
ENST00000648064.1
CDS-3UTR GCA 90 bp AGTGTTTCTGTTGAAATTGTCCTTCAGTCTCCTGTCATCAACTATACTCTAGTGTTCTTTGTTTGTTCCTaGAAGAGGAGCACCTCCTTG +
Preference number: 4 (lower is better)
Translates to: SVSVEIVLQSPVINYTLVFFVCS*KRSTSL
Trigger: CAAGGAGGTGCTCCTCTTGCAGGAACAAACAAAGAA...CACTAGAGTATAGTTGATGACAGGAGACTGAAGGACAATTTCAACAGAAACACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649902.1
CDS-3UTR CCA 90 bp TGCCACATTTTCAAATGCCTAATAGACACTATCGGTAGATACCTTCTTGGCCCAATCAGGAATTACCTCTaGTTCAACAATAGGTACCAG +
Preference number: 4 (lower is better)
Translates to: CHIFKCLIDTIGRYLLGPIRNYL*FNNRYQ
Trigger: CTGGTACCTATTGTTGAACCAGAGGTAATTCCTGAT...TGGGCCAAGAAGGTATCTACCGATAGTGTCTATTAGGCATTTGAAAATGTGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649902.1
CDS-3UTR CCA 90 bp TATTTCCAGCAGTTCAAATCTAATTGTGTCGAATTTCCAGGATTGGAGGAAAAGTTGGCAACAATGCTCTaGGCAATTTCTGAGAGCTCC +
Preference number: 4 (lower is better)
Translates to: YFQQFKSNCVEFPGLEEKLATML*AISESS
Trigger: GGAGCTCTCAGAAATTGCCCAGAGCATTGTTGCCAA...CTTTTCCTCCAATCCTGGAAATTCGACACAATTAGATTTGAACTGCTGGAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR CCA 90 bp ATGTGTTGTATTTCCAGCAGTTCAAATCTAATTGTGTCGAATTTCCAGGATTGGTTGGCAACAATGCTCTaGGCAATTTCTGAGAGCTCC +
Preference number: 4 (lower is better)
Translates to: MCCISSSSNLIVSNFQDWLATML*AISESS
Trigger: GGAGCTCTCAGAAATTGCCCAGAGCATTGTTGCCAA...CCAATCCTGGAAATTCGACACAATTAGATTTGAACTGCTGGAAATACAACACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR CCA 90 bp CAAAGAAAACAATGCTTCTCCGTGTTGGAAAGTCAAGCCCCAAATGTGAACATCCATCAAGCCCTTGAATaGTGGTTTCTTTGTTTGTTC +
Preference number: 4 (lower is better)
Translates to: QRKQCFSVLESQAPNVNIHQALE*WFLCLF
Trigger: GAACAAACAAAGAAACCACCATTCAAGGGCTTGATG...GATGTTCACATTTGGGGCTTGACTTTCCAACACGGAGAAGCATTGTTTTCTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649902.1
CDS-3UTR TCA 90 bp ATTTCCAGCAGTTCAAATCTAATTGTGTCGAATTTCCAGGATTGGAGGAAAAGTAGGCCATCAAGCCCTTaGATGGTGGTTTCTTTGTTT +
Preference number: 4 (lower is better)
Translates to: ISSSSNLIVSNFQDWRKSRPSSP*MVVSLF
Trigger: AAACAAAGAAACCACCATTCAAGGGCTTGATGGCCT...ACTTTTCCTCCAATCCTGGAAATTCGACACAATTAGATTTGAACTGCTGGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR GCA 90 bp AGTGTTTCTGTTGAAATTGTCCTTCAGTCTCCTGTCATCAACTATACTCTAGTGTTCCATTGGCAACAATaGTCTGGGCAATTTCTGAGA +
Preference number: 4 (lower is better)
Translates to: SVSVEIVLQSPVINYTLVFHWQQ*SGQFLR
Trigger: TCTCAGAAATTGCCCAGAGCATTGTTGCCAATGGAA...CACTAGAGTATAGTTGATGACAGGAGACTGAAGGACAATTTCAACAGAAACACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649902.1
CDS-3UTR GCA 90 bp TTGTATTTCCAGCAGTTCAAATCTAATTGTGTCGAATTTCCAGGATTGGAGGAATTCTTTGTTTGTTCCTaGAAGAGGAGCACCTCCTTG +
Preference number: 4 (lower is better)
Translates to: LYFQQFKSNCVEFPGLEEFFVCS*KRSTSL
Trigger: CAAGGAGGTGCTCCTCTTGCAGGAACAAACAAAGAA...TTCCTCCAATCCTGGAAATTCGACACAATTAGATTTGAACTGCTGGAAATACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR GCA 90 bp AAAAGTATCCTAGGTTCAGTTCTTGGTCCTCTTATCTCCTTCCCTCTGAAGTGTTGCCACATTTTCAAATaGCTAATAGACACTATCGGT +
Preference number: 4 (lower is better)
Translates to: KSILGSVLGPLISFPLKCCHIFK*LIDTIG
Trigger: ACCGATAGTGTCTATTAGGCATTTGAAAATGTGGCA...ACACTTCAGAGGGAAGGAGATAAGAGGACCAAGAACTGAACCTAGGATACTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649902.1
CDS-3UTR CCA 90 bp AGCAGTTCAAATCTAATTGTGTCGAATTTCCAGGATTGGAGGAAAAGTTGCTCCATCAGGAATTACCTCTaGTTCAACAATAGGTACCAG +
Preference number: 4 (lower is better)
Translates to: SSSNLIVSNFQDWRKSCSIRNYL*FNNRYQ
Trigger: CTGGTACCTATTGTTGAACCAGAGGTAATTCCTGAT...GGAGCAACTTTTCCTCCAATCCTGGAAATTCGACACAATTAGATTTGAACTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR CCA 90 bp TATTTCCAGCAGTTCAAATCTAATTGTGTCGAATTTCCAGGATTGGAGGAAAAGTTCTCAGTAACATACTaGCAGTGTTCCAGGTCATGG +
Preference number: 4 (lower is better)
Translates to: YFQQFKSNCVEFPGLEEKFSVTY*QCSRSW
Trigger: CCATGACCTGGAACACTGCCAGTATGTTACTGAGAA...CTTTTCCTCCAATCCTGGAAATTCGACACAATTAGATTTGAACTGCTGGAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR CCA 90 bp ATTTCCAGCAGTTCAAATCTAATTGTGTCGAATTTCCAGGATTGGAGGAAAAGTTTCTCAGTAACATACTaGCAGTGTTCCAGGTCATGG +
Preference number: 4 (lower is better)
Translates to: ISSSSNLIVSNFQDWRKSFSVTY*QCSRSW
Trigger: CCATGACCTGGAACACTGCCAGTATGTTACTGAGAA...ACTTTTCCTCCAATCCTGGAAATTCGACACAATTAGATTTGAACTGCTGGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR CCA 90 bp GTGTTTCAATCAGCAGTTGTTCTTTGGATGAGGAGCCGATATTGTTTTAAAGCCCATAGCTACTTGTTCTaGAGTATACTTCTTGGTGCA +
Preference number: 4 (lower is better)
Translates to: VFQSAVVLWMRSRYCFKAHSYLF*SILLGA
Trigger: TGCACCAAGAAGTATACTCCAGAACAAGTAGCTATG...GGCTTTAAAACAATATCGGCTCCTCATCCAAAGAACAACTGCTGATTGAAACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647789.2
ENST00000648064.1
CDS-3UTR CCA 90 bp CAGTTCAAATCTAATTGTGTCGAATTTCCAGGATTGGAGGAAAAGTTGCTCCCTCATAGCTACTTGTTCTaGAGTATACTTCTTGGTGCA +
Preference number: 4 (lower is better)
Translates to: QFKSNCVEFPGLEEKLLPHSYLF*SILLGA
Trigger: TGCACCAAGAAGTATACTCCAGAACAAGTAGCTATG...AGGGAGCAACTTTTCCTCCAATCCTGGAAATTCGACACAATTAGATTTGAACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR CCA 90 bp CCCAAAATAAAAAGTATCCTAGGTTCAGTTCTTGGTCCTCTTATCTCCTTCCCTCATAGCTACTTGTTCTaGAGTATACTTCTTGGTGCA +
Preference number: 4 (lower is better)
Translates to: PKIKSILGSVLGPLISFPHSYLF*SILLGA
Trigger: TGCACCAAGAAGTATACTCCAGAACAAGTAGCTATG...AGGGAAGGAGATAAGAGGACCAAGAACTGAACCTAGGATACTTTTTATTTTGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649902.1
CDS-3UTR CCA 90 bp ATTTCCAGCAGTTCAAATCTAATTGTGTCGAATTTCCAGGATTGGAGGAAAAGTTTCATAAAAGCCTCCTaGGTTGCCTCCTTGTTTGCA +
Preference number: 4 (lower is better)
Translates to: ISSSSNLIVSNFQDWRKSFIKAS*VASLFA
Trigger: TGCAAACAAGGAGGCAACCCAGGAGGCTTTTATGAA...ACTTTTCCTCCAATCCTGGAAATTCGACACAATTAGATTTGAACTGCTGGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR CCA 90 bp AGCAGTTCAAATCTAATTGTGTCGAATTTCCAGGATTGGAGGAAAAGTTGCTCCTTTCCTCCAGCTATTTaGATTTCCTGCATCTCACTT +
Preference number: 4 (lower is better)
Translates to: SSSNLIVSNFQDWRKSCSFPPAI*ISCISL
Trigger: AAGTGAGATGCAGGAAATCCAAATAGCTGGAGGAAA...GGAGCAACTTTTCCTCCAATCCTGGAAATTCGACACAATTAGATTTGAACTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648758.1
CDS-3UTR CCA 90 bp GTCCTTCAGTCTCCTGTCATCAACTATACTCTAGTGTGGATAATTCAAAATTCTAATGCTTCTCCGTGTTaGAAAGTCAAGCCCCAAATG +
Preference number: 4 (lower is better)
Translates to: VLQSPVINYTLVWIIQNSNASPC*KVKPQM
Trigger: CATTTGGGGCTTGACTTTCCAACACGGAGAAGCATT...AGAATTTTGAATTATCCACACTAGAGTATAGTTGATGACAGGAGACTGAAGGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649902.1
CDS-3UTR GCA 90 bp GTCCTTCAGTCTCCTGTCATCAACTATACTCTAGTGTGGATAATTCAAAATTCTGCCCAAAGAAAACAATaGTTCTCCGTGTTGGAAAGT +
Preference number: 4 (lower is better)
Translates to: VLQSPVINYTLVWIIQNSAQRKQ*FSVLES
Trigger: ACTTTCCAACACGGAGAAGCATTGTTTTCTTTGGGC...AGAATTTTGAATTATCCACACTAGAGTATAGTTGATGACAGGAGACTGAAGGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649902.1
CDS-3UTR GCA 90 bp CACATTTTCAAATGCCTAATAGACACTATCGGTAGATACCTTCTTGGCCCAAAGCTACAATATAATCGCTaGTTTTCTTGGTTGCTTCTC +
Preference number: 4 (lower is better)
Translates to: HIFKCLIDTIGRYLLGPKLQYNR*FSWLLL
Trigger: GAGAAGCAACCAAGAAAAGCAGCGATTATATTGTAG...CTTTGGGCCAAGAAGGTATCTACCGATAGTGTCTATTAGGCATTTGAAAATGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649902.1
CDS-3UTR GCA 90 bp CCCAAAATAAAAAGTATCCTAGGTTCAGTTCTTGGTCCTCTTATCTCCTTCCCTTCTTTATTCCCAGAATaGTTGGTTCACCCTACAATA +
Preference number: 4 (lower is better)
Translates to: PKIKSILGSVLGPLISFPSLFPE*LVHPTI
Trigger: TATTGTAGGGTGAACCAAGCATTCTGGGAATAAAGA...AGGGAAGGAGATAAGAGGACCAAGAACTGAACCTAGGATACTTTTTATTTTGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649902.1
CDS-3UTR CCA 90 bp AGTTCAAATCTAATTGTGTCGAATTTCCAGGATTGGAGGAAAAGTTGCTCCCTTCATAGCTACTTGTTCTaGAGTATACTTCTTGGTGCA +
Preference number: 4 (lower is better)
Translates to: SSNLIVSNFQDWRKSCSLHSYLF*SILLGA
Trigger: TGCACCAAGAAGTATACTCCAGAACAAGTAGCTATG...AAGGGAGCAACTTTTCCTCCAATCCTGGAAATTCGACACAATTAGATTTGAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR CCA 90 bp TGTTTCATAAGATGCACTTCTCTACACTCAGCTAATGAGGTGTTTCAATCAGCACATAGCTACTTGTTCTaGAGTATACTTCTTGGTGCA +
Preference number: 4 (lower is better)
Translates to: CFIRCTSLHSANEVFQSAHSYLF*SILLGA
Trigger: TGCACCAAGAAGTATACTCCAGAACAAGTAGCTATG...TGCTGATTGAAACACCTCATTAGCTGAGTGTAGAGAAGTGCATCTTATGAAACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647789.2
ENST00000648064.1
CDS-3UTR CCA 90 bp AGTTCAAATCTAATTGTGTCGAATTTCCAGGATTGGAGGAAAAGTTGCTCCCTTAGCCTATTATTTTCTTaGGTGGGTATTCTGGAGCAT +
Preference number: 4 (lower is better)
Translates to: SSNLIVSNFQDWRKSCSLSLLFS*VGILEH
Trigger: ATGCTCCAGAATACCCACCCAAGAAAATAATAGGCT...AAGGGAGCAACTTTTCCTCCAATCCTGGAAATTCGACACAATTAGATTTGAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647789.2
ENST00000648064.1
CDS-3UTR CCA 90 bp AAATCTAATTGTGTCGAATTTCCAGGATTGGAGGAAAAGTTGCTCCCTTTCAGCTTCTACATTTTTAGCTaGCTTCGTATTGTGAATGGC +
Preference number: 4 (lower is better)
Translates to: KSNCVEFPGLEEKLLPFSFYIFS*LRIVNG
Trigger: GCCATTCACAATACGAAGCCAGCTAAAAATGTAGAA...GCTGAAAGGGAGCAACTTTTCCTCCAATCCTGGAAATTCGACACAATTAGATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647789.2
CDS-3UTR CCA 90 bp TGCCACATTTTCAAATGCCTAATAGACACTATCGGTAGATACCTTCTTGGCCCATATTCCCAGAATGCTTaGTTCACCCTACAATATAAT +
Preference number: 4 (lower is better)
Translates to: CHIFKCLIDTIGRYLLGPYSQNA*FTLQYN
Trigger: ATTATATTGTAGGGTGAACCAAGCATTCTGGGAATA...TGGGCCAAGAAGGTATCTACCGATAGTGTCTATTAGGCATTTGAAAATGTGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649902.1
CDS-3UTR TCA 90 bp TGTTGTATTTCCAGCAGTTCAAATCTAATTGTGTCGAATTTCCAGGATTGGAGGGTACATTGGAATTACTaGGGGAGCTTTAAGAAATCT +
Preference number: 4 (lower is better)
Translates to: CCISSSSNLIVSNFQDWRVHWNY*GSFKKS
Trigger: AGATTTCTTAAAGCTCCCTCAGTAATTCCAATGTAC...CCTCCAATCCTGGAAATTCGACACAATTAGATTTGAACTGCTGGAAATACAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647789.2
CDS-3UTR GCA 90 bp ATGTGTTGTATTTCCAGCAGTTCAAATCTAATTGTGTCGAATTTCCAGGATTGGGACTGTTTCATAAGATaGACTTCTCTACACTCAGCT +
Preference number: 4 (lower is better)
Translates to: MCCISSSSNLIVSNFQDWDCFIR*TSLHSA
Trigger: AGCTGAGTGTAGAGAAGTGCATCTTATGAAACAGTC...CCAATCCTGGAAATTCGACACAATTAGATTTGAACTGCTGGAAATACAACACAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647789.2
ENST00000648064.1
CDS-3UTR CCA 90 bp ATGTGTTGTATTTCCAGCAGTTCAAATCTAATTGTGTCGAATTTCCAGGATTGGATCAGGAATTACCTCTaGTTCAACAATAGGTACCAG +
Preference number: 4 (lower is better)
Translates to: MCCISSSSNLIVSNFQDWIRNYL*FNNRYQ
Trigger: CTGGTACCTATTGTTGAACCAGAGGTAATTCCTGAT...CCAATCCTGGAAATTCGACACAATTAGATTTGAACTGCTGGAAATACAACACAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR CCA 90 bp TATTTCCAGCAGTTCAAATCTAATTGTGTCGAATTTCCAGGATTGGAGGAAAAGCATCAAGCCCTTGAATaGTGGTTTCTTTGTTTGTTC +
Preference number: 4 (lower is better)
Translates to: YFQQFKSNCVEFPGLEEKHQALE*WFLCLF
Trigger: GAACAAACAAAGAAACCACCATTCAAGGGCTTGATG...CTTTTCCTCCAATCCTGGAAATTCGACACAATTAGATTTGAACTGCTGGAAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS GCA 90 bp AGCCATGGCCCGCTTCATAAAAGCCTCCTGGGTTGCCTCCTTGTTTaGAGCCTTGCCACCCCAGGCAGCCAGTGCACTGGCCTGCAGGGC +
Preference number: 5 (lower is better)
Translates to: SHGPLHKSLLGCLLV*SLATPGSQCTGLQG
Trigger: GCCCTGCAGGCCAGTGCACTGGCTGCCTGGGGTGGCAAGGCTGCAAACAAGGAGGCAACCCAGGAGGCTTTTATGAAGCGGGCCATGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS CCA 90 bp TTGGCCGCCTGGCAGTTAGCCATGGCCCGCTTCATAAAAGCCTCCTaGGTTGCCTCCTTGTTTGCAGCCTTGCCACCCCAGGCAGCCAGT +
Preference number: 5 (lower is better)
Translates to: LAAWQLAMARFIKAS*VASLFAALPPQAAS
Trigger: ACTGGCTGCCTGGGGTGGCAAGGCTGCAAACAAGGAGGCAACCCAGGAGGCTTTTATGAAGCGGGCCATGGCTAACTGCCAGGCGGCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS CCA 90 bp GTAGCGAGCCAGGGCGTTGGCGTTTTCCTGGATAGCGAGGCTGGATaGACACTGGTCGGCAATCCTCAGCACAGCACGCCACTTCCCAAA +
Preference number: 5 (lower is better)
Translates to: VASQGVGVFLDSEAG*TLVGNPQHSTPLPK
Trigger: TTTGGGAAGTGGCGTGCTGTGCTGAGGATTGCCGACCAGTGTCCATCCAGCCTCGCTATCCAGGAAAACGCCAACGCCCTGGCTCGCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
ENST00000649902.1
CDS-3UTR CAA 90 bp AGTTGCTCCCTTTCAGCCCTCCTACTAGAAGCACTGGAGCTAGGCTGGCGGGCACCAGCAGTCACCATGTaGGGCTTTAGCAGGGTGCCC +
Preference number: 5 (lower is better)
Translates to: SCSLSALLLEALELGWRAPAVTM*GFSRVP
Trigger: GGGCACCCTGCTAAAGCCCAACATGGTGACTGCTGG...TGCCCGCCAGCCTAGCTCCAGTGCTTCTAGTAGGAGGGCTGAAAGGGAGCAACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS CCA 90 bp GCCAGGGCGTTGGCGTTTTCCTGGATAGCGAGGCTGGATGGACACTaGTCGGCAATCCTCAGCACAGCACGCCACTTCCCAAAGTCAACA +
Preference number: 5 (lower is better)
Translates to: ARALAFSWIARLDGH*SAILSTARHFPKST
Trigger: TGTTGACTTTGGGAAGTGGCGTGCTGTGCTGAGGATTGCCGACCAGTGTCCATCCAGCCTCGCTATCCAGGAAAACGCCAACGCCCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
ENST00000649902.1
CDS-3UTR CAA 90 bp GGTGGAAGCAGCCCCAGAAGAACCCGTGTGAACATACTGTCCTTTGGCCGCCTGCCCCCGATGCTCTGGTaGATGGAACTGTCCACAGAG +
Preference number: 5 (lower is better)
Translates to: GGSSPRRTRVNILSFGRLPPMLW*MELSTE
Trigger: CTCTGTGGACAGTTCCATCAACCAGAGCATCGGGGG...CAGGCGGCCAAAGGACAGTATGTTCACACGGGTTCTTCTGGGGCTGCTTCCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616752.1
CDS-3UTR CAA 90 bp TCCCTTTCAGCCCTCCTACTAGAAGCACTGGAGCTAGGCTGGCGGGCATTGGACCCCCCGATGCTCTGGTaGATGGAACTGTCCACAGAG +
Preference number: 5 (lower is better)
Translates to: SLSALLLEALELGWRALDPPMLW*MELSTE
Trigger: CTCTGTGGACAGTTCCATCAACCAGAGCATCGGGGG...GTCCAATGCCCGCCAGCCTAGCTCCAGTGCTTCTAGTAGGAGGGCTGAAAGGGA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR CAA 90 bp CCTTTCAGCCCTCCTACTAGAAGCACTGGAGCTAGGCTGGCGGGCATTGGACCCCCTCCTTGGTCTAACTaGATTCCCACCACGATCCCC +
Preference number: 5 (lower is better)
Translates to: PFSPPTRSTGARLAGIGPPPWSN*IPTTIP
Trigger: GGGGATCGTGGTGGGAATCAAGTTAGACCAAGGAGG...GGGTCCAATGCCCGCCAGCCTAGCTCCAGTGCTTCTAGTAGGAGGGCTGAAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616752.1
CDS-3UTR CAA 90 bp AAGTTGCTCCCTTTCAGCCCTCCTACTAGAAGCACTGGAGCTAGGCTGGCGGGCCTAGGCTGGCGGGCATaGGACCCTAGTAGGTATAGC +
Preference number: 5 (lower is better)
Translates to: KLLPFSPPTRSTGARLAGLGWRA*DPSRYS
Trigger: GCTATACCTACTAGGGTCCAATGCCCGCCAGCCTAG...GCCCGCCAGCCTAGCTCCAGTGCTTCTAGTAGGAGGGCTGAAAGGGAGCAACTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS CCA 90 bp AAGAGGTGGCAGCATCTTACCATGGCCCGCTTCATAAAAGCCTCCTaGGTTGCCTCCTTGTTTGCAGCCTTGCCACCCCAGGCAGCCAGT +
Preference number: 5 (lower is better)
Translates to: KRWQHLTMARFIKAS*VASLFAALPPQAAS
Trigger: ACTGGCTGCCTGGGGTGGCAAGGCTGCAAACAAGGAGGCAACCCAGGAGGCTTTTATGAAGCGGGCCATGGTAAGATGCTGCCACCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649902.1
CDS-3UTR CAA 90 bp AGCAGCCCCAGAAGAACCCGTGTGAACATACTGTCCTTTGGCCGCCTGGCAGTTGGGTTGCCTCCTTGTTaGCAGCCTTGCCACCCAAGA +
Preference number: 5 (lower is better)
Translates to: SSPRRTRVNILSFGRLAVGLPPC*QPCHPR
Trigger: TCTTGGGTGGCAAGGCTGCAAACAAGGAGGCAACCC...AACTGCCAGGCGGCCAAAGGACAGTATGTTCACACGGGTTCTTCTGGGGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616752.1
CDS-3UTR CAA 90 bp AGTTGCTCCCTTTCAGCCCTCCTACTAGAAGCACTGGAGCTAGGCTGGCGGGCATCAGTGTTTTCCACCTaGATCCTCTGCAGGCGGTTC +
Preference number: 5 (lower is better)
Translates to: SCSLSALLLEALELGWRASVFST*ILCRRF
Trigger: GAACCGCCTGCAGAGGATCAAGGTGGAAAACACTGA...TGCCCGCCAGCCTAGCTCCAGTGCTTCTAGTAGGAGGGCTGAAAGGGAGCAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR CAA 90 bp AGGAAAAGTTGCTCCCTTTCAGCCCTCCTACTAGAAGCACTGGAGCTAGGCTGGCCAGCAGTCACCATGTaGGGCTTTAGCAGGGTGCCC +
Preference number: 5 (lower is better)
Translates to: RKSCSLSALLLEALELGWPAVTM*GFSRVP
Trigger: GGGCACCCTGCTAAAGCCCAACATGGTGACTGCTGG...CCAGCCTAGCTCCAGTGCTTCTAGTAGGAGGGCTGAAAGGGAGCAACTTTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR CAA 90 bp TTGGGTGGGTATTCTGGAGCATGGGGAGCTGAAAGTGTTGCAAGGAAACTGCTGGGGTTGCCTCCTTGTTaGCAGCCTTGCCACCCCAGG +
Preference number: 5 (lower is better)
Translates to: LGGYSGAWGAESVARKLLGLPPC*QPCHPR
Trigger: CCTGGGGTGGCAAGGCTGCAAACAAGGAGGCAACCC...CAGCAGTTTCCTTGCAACACTTTCAGCTCCCCATGCTCCAGAATACCCACCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000647789.2
ENST00000648064.1
CDS TCA 90 bp GGTAGAGGGTCTCGTGGAAAAGGATCACACCCCCGATGCTCTGGTTaGTGGAACTGTCCACAGAGAAGAGGATTTCTCGGAACTGCCGGC +
Preference number: 5 (lower is better)
Translates to: GRGSRGKGSHPRCSG*WNCPQRRGFLGTAG
Trigger: GCCGGCAGTTCCGAGAAATCCTCTTCTCTGTGGACAGTTCCATCAACCAGAGCATCGGGGGTGTGATCCTTTTCCACGAGACCCTCTACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
ENST00000648906.1
ENST00000649902.1
ENST00000650613.1
CDS TCA 90 bp GTTGGATTCTGGAGGCGGTGGGAGCCAACACTTGCTGCGCATCAGTaGGCAGAGCCACAGTCAAATCCATGTGACCTTCCAAGAGCAAGC +
Preference number: 5 (lower is better)
Translates to: VGFWRRWEPTLAAHQ*AEPQSNPCDLPRAS
Trigger: GCTTGCTCTTGGAAGGTCACATGGATTTGACTGTGGCTCTGCTCACTGATGCGCAGCAAGTGTTGGCTCCCACCGCCTCCAGAATCCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648064.1
CDS GCA 90 bp GAGTGTGCGAGAGTTGTGCACAGAACCATGGGTGGCTCAGATGGATaGATGACCAAGACAGTTGGGGGTGCAGACATGCTGTGCAGACCT +
Preference number: 5 (lower is better)
Translates to: ECARVVHRTMGGSDG*MTKTVGGADMLCRP
Trigger: AGGTCTGCACAGCATGTCTGCACCCCCAACTGTCTTGGTCATGCATCCATCTGAGCCACCCATGGTTCTGTGCACAACTCTCGCACACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648906.1
CDS CCA 90 bp TTGGCCGCCTGGCAGTTAGCCATGGCCCGCTTCATAAAAGCCTCCTaGGTTGCCTCCTTGTTTGCAGCCTTGCCACCCAAGAGAAACTTA +
Preference number: 5 (lower is better)
Translates to: LAAWQLAMARFIKAS*VASLFAALPPKRNL
Trigger: TAAGTTTCTCTTGGGTGGCAAGGCTGCAAACAAGGAGGCAACCCAGGAGGCTTTTATGAAGCGGGCCATGGCTAACTGCCAGGCGGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616752.1
CDS-3UTR CAA 90 bp AGTTGCTCCCTTTCAGCCCTCCTACTAGAAGCACTGGAGCTAGGCTGGCGGGCAATGGTGACAGGTAGTTaGGGAGAGAAGAGTCCTCCT +
Preference number: 5 (lower is better)
Translates to: SCSLSALLLEALELGWRAMVTGS*GEKSPP
Trigger: AGGAGGACTCTTCTCTCCCAAACTACCTGTCACCAT...TGCCCGCCAGCCTAGCTCCAGTGCTTCTAGTAGGAGGGCTGAAAGGGAGCAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616752.1
ENST00000647789.2
CDS-3UTR CAA 90 bp CCTTTCAGCCCTCCTACTAGAAGCACTGGAGCTAGGCTGGCGGGCATTGGACCCACGATCCCCTTTTCCTaGAGGATGTTTCTGAACAGC +
Preference number: 5 (lower is better)
Translates to: PFSPPTRSTGARLAGIGPTIPFS*RMFLNS
Trigger: GCTGTTCAGAAACATCCTCAAGGAAAAGGGGATCGT...GGGTCCAATGCCCGCCAGCCTAGCTCCAGTGCTTCTAGTAGGAGGGCTGAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616752.1
CDS-3UTR CAA 90 bp CCAGGATTGGAGGAAAAGTTGCTCCCTTTCAGCCCTCCTACTAGAAGCACTGGACCAGCAGTCACCATGTaGGGCTTTAGCAGGGTGCCC +
Preference number: 5 (lower is better)
Translates to: PGLEEKLLPFSPPTRSTGPAVTM*GFSRVP
Trigger: GGGCACCCTGCTAAAGCCCAACATGGTGACTGCTGG...TCCAGTGCTTCTAGTAGGAGGGCTGAAAGGGAGCAACTTTTCCTCCAATCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR CAA 90 bp TTGGAGGAAAAGTTGCTCCCTTTCAGCCCTCCTACTAGAAGCACTGGAGCTAGGCCAGCAGTCACCATGTaGGGCTTTAGCAGGGTGCCC +
Preference number: 5 (lower is better)
Translates to: LEEKLLPFSPPTRSTGARPAVTM*GFSRVP
Trigger: GGGCACCCTGCTAAAGCCCAACATGGTGACTGCTGG...CCTAGCTCCAGTGCTTCTAGTAGGAGGGCTGAAAGGGAGCAACTTTTCCTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR CAA 90 bp GGGTATTCTGGAGCATGGGGAGCTGAAAGTGTTGCAAGGAAACTGCTGTGTGAAGCGGTGTCCAGTGAGTaGGATTCTGGAGGCGGTGGG +
Preference number: 5 (lower is better)
Translates to: GYSGAWGAESVARKLLCEAVSSE*DSGGGG
Trigger: CCCACCGCCTCCAGAATCCAACTCACTGGACACCGC...TTCACACAGCAGTTTCCTTGCAACACTTTCAGCTCCCCATGCTCCAGAATACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648064.1
CDS GCA 90 bp AACCATGGGTGGCTCAGATGGATGCATGACCAAGACAGTTGGGGGTaGAGACATGCTGTGCAGACCTCTGTGACACCTCTGACCCATTTC +
Preference number: 5 (lower is better)
Translates to: NHGWLRWMHDQDSWG*RHAVQTSVTPLTHF
Trigger: GAAATGGGTCAGAGGTGTCACAGAGGTCTGCACAGCATGTCTGCACCCCCAACTGTCTTGGTCATGCATCCATCTGAGCCACCCATGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648906.1
CDS-3UTR CAA 90 bp TCCCTTTCAGCCCTCCTACTAGAAGCACTGGAGCTAGGCTGGCGGGCATTGGACTGGTGGTTTCTTTGTTaGTTCCTGCAAGAGGAGCAC +
Preference number: 5 (lower is better)
Translates to: SLSALLLEALELGWRALDWWFLC*FLQEEH
Trigger: GTGCTCCTCTTGCAGGAACAAACAAAGAAACCACCA...GTCCAATGCCCGCCAGCCTAGCTCCAGTGCTTCTAGTAGGAGGGCTGAAAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR CAA 90 bp AAGTTGCTCCCTTTCAGCCCTCCTACTAGAAGCACTGGAGCTAGGCTGGCGGGCTCCTTGTTTGCAGCCTaGCCACCCAAGAGAAACTTA +
Preference number: 5 (lower is better)
Translates to: KLLPFSPPTRSTGARLAGSLFAA*PPKRNL
Trigger: TAAGTTTCTCTTGGGTGGCAAGGCTGCAAACAAGGA...GCCCGCCAGCCTAGCTCCAGTGCTTCTAGTAGGAGGGCTGAAAGGGAGCAACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616752.1
CDS-3UTR CAA 90 bp TTAGAGGATCCCAAGTCTAGGGTTTCTGATTTAATTGAGCTGGGGTGTGGCCTGGGGTTGCCTCCTTGTTaGCAGCCTTGCCACCCCAGG +
Preference number: 5 (lower is better)
Translates to: LEDPKSRVSDLIELGCGLGLPPC*QPCHPR
Trigger: CCTGGGGTGGCAAGGCTGCAAACAAGGAGGCAACCC...CAGGCCACACCCCAGCTCAATTAAATCAGAAACCCTAGACTTGGGATCCTCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000647789.2
CDS CCA 90 bp AAAAGAGTGTGCGAGAGTTGTGCACAGAACCATGGGTGGCTCAGATaGATGCATGACCAAGACAGTTGGGGGTGCAGACATGCTGTGCAG +
Preference number: 5 (lower is better)
Translates to: KRVCESCAQNHGWLR*MHDQDSWGCRHAVQ
Trigger: CTGCACAGCATGTCTGCACCCCCAACTGTCTTGGTCATGCATCCATCTGAGCCACCCATGGTTCTGTGCACAACTCTCGCACACTCTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648906.1
CDS CCA 90 bp CAGGTCTGGAAAAGAGTGTGCGAGAGTTGTGCACAGAACCATGGGTaGCTCAGATGGATGCATGACCAAGACAGTTGGGGGTGCAGACAT +
Preference number: 5 (lower is better)
Translates to: QVWKRVCESCAQNHG*LRWMHDQDSWGCRH
Trigger: ATGTCTGCACCCCCAACTGTCTTGGTCATGCATCCATCTGAGCCACCCATGGTTCTGTGCACAACTCTCGCACACTCTTTTCCAGACCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648906.1
CDS-3UTR CAA 90 bp ATTGTGTCGAATTTCCAGGATTGGAGGAAAAGTTGCTCCCTTTCAGCCCTCCTAGGGTTGCCTCCTTGTTaGCAGCCTTGCCACCCCAGG +
Preference number: 5 (lower is better)
Translates to: IVSNFQDWRKSCSLSALLGLPPC*QPCHPR
Trigger: CCTGGGGTGGCAAGGCTGCAAACAAGGAGGCAACCC...TAGGAGGGCTGAAAGGGAGCAACTTTTCCTCCAATCCTGGAAATTCGACACAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS TCA 90 bp GCCAGTGTGCTTGGAGTTTGCCTAGGACAAAGCAGAAGTGAGGTGTaGATGGAGGTGTTCACCTTGATTCCCACCACGATCCCCTTTTCC +
Preference number: 5 (lower is better)
Translates to: ASVLGVCLGQSRSEV*MEVFTLIPTTIPFS
Trigger: GGAAAAGGGGATCGTGGTGGGAATCAAGGTGAACACCTCCATTCACACCTCACTTCTGCTTTGTCCTAGGCAAACTCCAAGCACACTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648906.1
ENST00000650613.1
CDS TCA 90 bp TGTCCTTGCCAGTGTGCTTGGAGTTTGCCTAGGACAAAGCAGAAGTaGGGTGTGAATGGAGGTGTTCACCTTGATTCCCACCACGATCCC +
Preference number: 5 (lower is better)
Translates to: CPCQCAWSLPRTKQK*GVNGGVHLDSHHDP
Trigger: GGGATCGTGGTGGGAATCAAGGTGAACACCTCCATTCACACCTCACTTCTGCTTTGTCCTAGGCAAACTCCAAGCACACTGGCAAGGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648906.1
ENST00000650613.1
CDS-3UTR CAA 90 bp GGATTGGAGGAAAAGTTGCTCCCTTTCAGCCCTCCTACTAGAAGCACTGGAGCTGGATTGGAGGAAAAGTaGCTCCCTTTCAGCCCTCCT +
Preference number: 5 (lower is better)
Translates to: GLEEKLLPFSPPTRSTGAGLEEK*LPFSPP
Trigger: AGGAGGGCTGAAAGGGAGCAACTTTTCCTCCAATCC...AGCTCCAGTGCTTCTAGTAGGAGGGCTGAAAGGGAGCAACTTTTCCTCCAATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR CAA 90 bp ATTATTTTCTTGGGTGGGTATTCTGGAGCATGGGGAGCTGAAAGTGTTGCAAGGGGTGGGAGCCAACACTaGCTGCGCATCAGTGAGCAG +
Preference number: 5 (lower is better)
Translates to: IIFLGGYSGAWGAESVARGGSQH*LRISEQ
Trigger: CTGCTCACTGATGCGCAGCAAGTGTTGGCTCCCACC...CCTTGCAACACTTTCAGCTCCCCATGCTCCAGAATACCCACCCAAGAAAATAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648064.1
CDS CCA 90 bp CCAGACAAAAAGCAGATGCCAGGAACAGCTGCAGGAACAGTACGGTaGAGAGCTGTTACGGTGGCCATAGCTACTTGTTCTGGAGTATAC +
Preference number: 5 (lower is better)
Translates to: PDKKQMPGTAAGTVR*RAVTVAIATCSGVY
Trigger: GTATACTCCAGAACAAGTAGCTATGGCCACCGTAACAGCTCTCCACCGTACTGTTCCTGCAGCTGTTCCTGGCATCTGCTTTTTGTCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
ENST00000649902.1
CDS-3UTR CAA 90 bp GGGTATTCTGGAGCATGGGGAGCTGAAAGTGTTGCAAGGAAACTGCTGTGTGAAAGGATCCCCTTTCCATaGGCAACAATGCTCTGGGCA +
Preference number: 5 (lower is better)
Translates to: GYSGAWGAESVARKLLCERIPFP*ATMLWA
Trigger: TGCCCAGAGCATTGTTGCCAATGGAAAGGGGATCCT...TTCACACAGCAGTTTCCTTGCAACACTTTCAGCTCCCCATGCTCCAGAATACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
CDS-3UTR CAA 90 bp TCTTGGGTGGGTATTCTGGAGCATGGGGAGCTGAAAGTGTTGCAAGGAAACTGCTCTGGAGTATACTTCTaGGTGCAGGCATGTCCAGCA +
Preference number: 5 (lower is better)
Translates to: SWVGILEHGELKVLQGNCSGVYF*VQACPA
Trigger: TGCTGGACATGCCTGCACCAAGAAGTATACTCCAGA...GCAGTTTCCTTGCAACACTTTCAGCTCCCCATGCTCCAGAATACCCACCCAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647789.2
ENST00000648064.1
CDS-3UTR CAA 90 bp CCAGGATTGGAGGAAAAGTTGCTCCCTTTCAGCCCTCCTACTAGAAGCACTGGATCTGGAGTATACTTCTaGGTGCAGGCATGTCCAGCA +
Preference number: 5 (lower is better)
Translates to: PGLEEKLLPFSPPTRSTGSGVYF*VQACPA
Trigger: TGCTGGACATGCCTGCACCAAGAAGTATACTCCAGA...TCCAGTGCTTCTAGTAGGAGGGCTGAAAGGGAGCAACTTTTCCTCCAATCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR CAA 90 bp GGGTATTCTGGAGCATGGGGAGCTGAAAGTGTTGCAAGGAAACTGCTGTGTGAAGGATTGGAGGAAAAGTaGCTCCCTTTCAGCCCTCCT +
Preference number: 5 (lower is better)
Translates to: GYSGAWGAESVARKLLCEGLEEK*LPFSPP
Trigger: AGGAGGGCTGAAAGGGAGCAACTTTTCCTCCAATCC...TTCACACAGCAGTTTCCTTGCAACACTTTCAGCTCCCCATGCTCCAGAATACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
CDS-3UTR CAA 90 bp TATTCTGGAGCATGGGGAGCTGAAAGTGTTGCAAGGAAACTGCTGTGTGAAATTTCCTTGTTTGCAGCCTaGCCACCCCAGGCAGCCAGT +
Preference number: 5 (lower is better)
Translates to: YSGAWGAESVARKLLCEISLFAA*PPQAAS
Trigger: ACTGGCTGCCTGGGGTGGCAAGGCTGCAAACAAGGA...AATTTCACACAGCAGTTTCCTTGCAACACTTTCAGCTCCCCATGCTCCAGAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647789.2
ENST00000648064.1
CDS-3UTR CAA 90 bp GTGTCGAATTTCCAGGATTGGAGGAAAAGTTGCTCCCTTTCAGCCCTCCTACTATCAGTGTTTTCCACCTaGATCCTCTGCAGGCGGTTC +
Preference number: 5 (lower is better)
Translates to: VSNFQDWRKSCSLSALLLSVFST*ILCRRF
Trigger: GAACCGCCTGCAGAGGATCAAGGTGGAAAACACTGA...TAGTAGGAGGGCTGAAAGGGAGCAACTTTTCCTCCAATCCTGGAAATTCGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR CAA 90 bp GGATTGGAGGAAAAGTTGCTCCCTTTCAGCCCTCCTACTAGAAGCACTGGAGCTACGATCCCCTTTTCCTaGAGGATGTTTCTGAACAGC +
Preference number: 5 (lower is better)
Translates to: GLEEKLLPFSPPTRSTGATIPFS*RMFLNS
Trigger: GCTGTTCAGAAACATCCTCAAGGAAAAGGGGATCGT...AGCTCCAGTGCTTCTAGTAGGAGGGCTGAAAGGGAGCAACTTTTCCTCCAATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR CAA 90 bp CCTATTATTTTCTTGGGTGGGTATTCTGGAGCATGGGGAGCTGAAAGTGTTGCACCTCCTTGGTCTAACTaGATTCCCACCACGATCCCC +
Preference number: 5 (lower is better)
Translates to: PIIFLGGYSGAWGAESVAPPWSN*IPTTIP
Trigger: GGGGATCGTGGTGGGAATCAAGTTAGACCAAGGAGG...TGCAACACTTTCAGCTCCCCATGCTCCAGAATACCCACCCAAGAAAATAATAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647789.2
ENST00000648064.1
CDS-3UTR CAA 90 bp TTGGGTGGGTATTCTGGAGCATGGGGAGCTGAAAGTGTTGCAAGGAAACTGCTGTGGTGGTTTCTTTGTTaGTTCCTGCAAGAGGAGCAC +
Preference number: 5 (lower is better)
Translates to: LGGYSGAWGAESVARKLLWWFLC*FLQEEH
Trigger: GTGCTCCTCTTGCAGGAACAAACAAAGAAACCACCA...CAGCAGTTTCCTTGCAACACTTTCAGCTCCCCATGCTCCAGAATACCCACCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647789.2
ENST00000648064.1
CDS-3UTR CAA 90 bp CAGAATGCTTGGTTCACCCTACAATATAATCGCTGCTTTTCTTGGTTGCTTCTCCCAGCAGTCACCATGTaGGGCTTTAGCAGGGTGCCC +
Preference number: 5 (lower is better)
Translates to: QNAWFTLQYNRCFSWLLLPAVTM*GFSRVP
Trigger: GGGCACCCTGCTAAAGCCCAACATGGTGACTGCTGG...GAGAAGCAACCAAGAAAAGCAGCGATTATATTGTAGGGTGAACCAAGCATTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649902.1
CDS-3UTR CAA 90 bp GAGGAAAAGTTGCTCCCTTTCAGCCCTCCTACTAGAAGCACTGGAGCTAGGCTGATCAGCAGTTGTTCTTaGGATGAGGAGCCGATATTG +
Preference number: 5 (lower is better)
Translates to: EEKLLPFSPPTRSTGARLISSCS*DEEPIL
Trigger: CAATATCGGCTCCTCATCCAAAGAACAACTGCTGAT...CAGCCTAGCTCCAGTGCTTCTAGTAGGAGGGCTGAAAGGGAGCAACTTTTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647789.2
ENST00000648064.1
CDS-3UTR CAA 90 bp CTAATTGTGTCGAATTTCCAGGATTGGAGGAAAAGTTGCTCCCTTTCAGCCCTCTCAGTGTTTTCCACCTaGATCCTCTGCAGGCGGTTC +
Preference number: 5 (lower is better)
Translates to: LIVSNFQDWRKSCSLSALSVFST*ILCRRF
Trigger: GAACCGCCTGCAGAGGATCAAGGTGGAAAACACTGA...GAGGGCTGAAAGGGAGCAACTTTTCCTCCAATCCTGGAAATTCGACACAATTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR CAA 90 bp AATCTAATTGTGTCGAATTTCCAGGATTGGAGGAAAAGTTGCTCCCTTTCAGCCCTAGGCTGGCGGGCATaGGACCCTAGTAGGTATAGC +
Preference number: 5 (lower is better)
Translates to: NLIVSNFQDWRKSCSLSALGWRA*DPSRYS
Trigger: GCTATACCTACTAGGGTCCAATGCCCGCCAGCCTAG...GGCTGAAAGGGAGCAACTTTTCCTCCAATCCTGGAAATTCGACACAATTAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR CAA 90 bp AATGCTTGGTTCACCCTACAATATAATCGCTGCTTTTCTTGGTTGCTTCTCTTCTCCTTGTTTGCAGCCTaGCCACCCCAGGCAGCCAGT +
Preference number: 5 (lower is better)
Translates to: NAWFTLQYNRCFSWLLLFSLFAA*PPQAAS
Trigger: ACTGGCTGCCTGGGGTGGCAAGGCTGCAAACAAGGA...GAAGAGAAGCAACCAAGAAAAGCAGCGATTATATTGTAGGGTGAACCAAGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649902.1
CDS-3UTR CAA 90 bp CTTCCCAAAATAAAAAGTATCCTAGGTTCAGTTCTTGGTCCTCTTATCTCCTTCGGGTTGCCTCCTTGTTaGCAGCCTTGCCACCCCAGG +
Preference number: 5 (lower is better)
Translates to: LPKIKSILGSVLGPLISFGLPPC*QPCHPR
Trigger: CCTGGGGTGGCAAGGCTGCAAACAAGGAGGCAACCC...GAAGGAGATAAGAGGACCAAGAACTGAACCTAGGATACTTTTTATTTTGGGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000649902.1
CDS CCA 90 bp GGAAAGTCAAGCCCCAAATGTGAACATCATCAAGTAGATAAGAGGTaGCAGCATCTTACCATGGCCCGCTTCATAAAAGCCTCCTGGGTT +
Preference number: 5 (lower is better)
Translates to: GKSSPKCEHHQVDKR*QHLTMARFIKASWV
Trigger: AACCCAGGAGGCTTTTATGAAGCGGGCCATGGTAAGATGCTGCCACCTCTTATCTACTTGATGATGTTCACATTTGGGGCTTGACTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649902.1
CDS-3UTR CAA 90 bp ATTGTGTCGAATTTCCAGGATTGGAGGAAAAGTTGCTCCCTTTCAGCCCTCCTAATGGTGACAGGTAGTTaGGGAGAGAAGAGTCCTCCT +
Preference number: 5 (lower is better)
Translates to: IVSNFQDWRKSCSLSALLMVTGS*GEKSPP
Trigger: AGGAGGACTCTTCTCTCCCAAACTACCTGTCACCAT...TAGGAGGGCTGAAAGGGAGCAACTTTTCCTCCAATCCTGGAAATTCGACACAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616752.1
ENST00000647789.2
CDS-3UTR CAA 90 bp CTATTATTTTCTTGGGTGGGTATTCTGGAGCATGGGGAGCTGAAAGTGTTGCAAAGGATCCCCTTTCCATaGGCAACAATGCTCTGGGCA +
Preference number: 5 (lower is better)
Translates to: LLFSWVGILEHGELKVLQRIPFP*ATMLWA
Trigger: TGCCCAGAGCATTGTTGCCAATGGAAAGGGGATCCT...TTGCAACACTTTCAGCTCCCCATGCTCCAGAATACCCACCCAAGAAAATAATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000647789.2
ENST00000648064.1
CDS-3UTR CAA 90 bp AAATCTAATTGTGTCGAATTTCCAGGATTGGAGGAAAAGTTGCTCCCTTTCAGCCCCCCGATGCTCTGGTaGATGGAACTGTCCACAGAG +
Preference number: 5 (lower is better)
Translates to: KSNCVEFPGLEEKLLPFSPPMLW*MELSTE
Trigger: CTCTGTGGACAGTTCCATCAACCAGAGCATCGGGGG...GCTGAAAGGGAGCAACTTTTCCTCCAATCCTGGAAATTCGACACAATTAGATTT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR CAA 90 bp CCCAAAATAAAAAGTATCCTAGGTTCAGTTCTTGGTCCTCTTATCTCCTTCCCTCCCCCGATGCTCTGGTaGATGGAACTGTCCACAGAG +
Preference number: 5 (lower is better)
Translates to: PKIKSILGSVLGPLISFPPPMLW*MELSTE
Trigger: CTCTGTGGACAGTTCCATCAACCAGAGCATCGGGGG...AGGGAAGGAGATAAGAGGACCAAGAACTGAACCTAGGATACTTTTTATTTTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000649902.1
CDS-3UTR CAA 90 bp CAAAGAAAACAATGCTTCTCCGTGTTGGAAAGTCAAGCCCCAAATGTGAACATCCCTCCTTGGTCTAACTaGATTCCCACCACGATCCCC +
Preference number: 5 (lower is better)
Translates to: QRKQCFSVLESQAPNVNIPPWSN*IPTTIP
Trigger: GGGGATCGTGGTGGGAATCAAGTTAGACCAAGGAGG...GATGTTCACATTTGGGGCTTGACTTTCCAACACGGAGAAGCATTGTTTTCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649902.1
CDS-3UTR CAA 90 bp TGTTTCATAAGATGCACTTCTCTACACTCAGCTAATGAGGTGTTTCAATCAGCATCCTTGTTTGCAGCCTaGCCACCCCAGGCAGCCAGT +
Preference number: 5 (lower is better)
Translates to: CFIRCTSLHSANEVFQSASLFAA*PPQAAS
Trigger: ACTGGCTGCCTGGGGTGGCAAGGCTGCAAACAAGGA...TGCTGATTGAAACACCTCATTAGCTGAGTGTAGAGAAGTGCATCTTATGAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647789.2
ENST00000648064.1
CDS-3UTR CAA 90 bp GAGGAAAAGTTGCTCCCTTTCAGCCCTCCTACTAGAAGCACTGGAGCTAGGCTGAAATACACTGAGTCTTaGGACAGCAAGAGCAGAAAA +
Preference number: 5 (lower is better)
Translates to: EEKLLPFSPPTRSTGARLKYTES*DSKSRK
Trigger: TTTTCTGCTCTTGCTGTCCAAAGACTCAGTGTATTT...CAGCCTAGCTCCAGTGCTTCTAGTAGGAGGGCTGAAAGGGAGCAACTTTTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647789.2
CDS-3UTR CAA 90 bp TGTTGTATTTCCAGCAGTTCAAATCTAATTGTGTCGAATTTCCAGGATTGGAGGCCCCCGATGCTCTGGTaGATGGAACTGTCCACAGAG +
Preference number: 5 (lower is better)
Translates to: CCISSSSNLIVSNFQDWRPPMLW*MELSTE
Trigger: CTCTGTGGACAGTTCCATCAACCAGAGCATCGGGGG...CCTCCAATCCTGGAAATTCGACACAATTAGATTTGAACTGCTGGAAATACAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR CAA 90 bp ATTGTGTCGAATTTCCAGGATTGGAGGAAAAGTTGCTCCCTTTCAGCCCTCCTAACGATCCCCTTTTCCTaGAGGATGTTTCTGAACAGC +
Preference number: 5 (lower is better)
Translates to: IVSNFQDWRKSCSLSALLTIPFS*RMFLNS
Trigger: GCTGTTCAGAAACATCCTCAAGGAAAAGGGGATCGT...TAGGAGGGCTGAAAGGGAGCAACTTTTCCTCCAATCCTGGAAATTCGACACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR CAA 90 bp ATTGTGTCGAATTTCCAGGATTGGAGGAAAAGTTGCTCCCTTTCAGCCCTCCTATGGTGGTTTCTTTGTTaGTTCCTGCAAGAGGAGCAC +
Preference number: 5 (lower is better)
Translates to: IVSNFQDWRKSCSLSALLWWFLC*FLQEEH
Trigger: GTGCTCCTCTTGCAGGAACAAACAAAGAAACCACCA...TAGGAGGGCTGAAAGGGAGCAACTTTTCCTCCAATCCTGGAAATTCGACACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR CAA 90 bp GTGTCGAATTTCCAGGATTGGAGGAAAAGTTGCTCCCTTTCAGCCCTCCTACTATTGATAGCATTGAGGTaGAGAGTGGCATCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: VSNFQDWRKSCSLSALLLLIALR*RVASSS
Trigger: TGAAGAGGATGCCACTCTCAACCTCAATGCTATCAA...TAGTAGGAGGGCTGAAAGGGAGCAACTTTTCCTCCAATCCTGGAAATTCGACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR CAA 90 bp TGTTGTATTTCCAGCAGTTCAAATCTAATTGTGTCGAATTTCCAGGATTGGAGGCTAGGCTGGCGGGCATaGGACCCTAGTAGGTATAGC +
Preference number: 5 (lower is better)
Translates to: CCISSSSNLIVSNFQDWRLGWRA*DPSRYS
Trigger: GCTATACCTACTAGGGTCCAATGCCCGCCAGCCTAG...CCTCCAATCCTGGAAATTCGACACAATTAGATTTGAACTGCTGGAAATACAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR CAA 90 bp AATCTAATTGTGTCGAATTTCCAGGATTGGAGGAAAAGTTGCTCCCTTTCAGCCGGGGAGCTGAAAGTGTaGCAAGGAAACTGCTGTGTG +
Preference number: 5 (lower is better)
Translates to: NLIVSNFQDWRKSCSLSAGELKV*QGNCCV
Trigger: CACACAGCAGTTTCCTTGCAACACTTTCAGCTCCCC...GGCTGAAAGGGAGCAACTTTTCCTCCAATCCTGGAAATTCGACACAATTAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
CDS-3UTR CAA 90 bp TTGTATTTCCAGCAGTTCAAATCTAATTGTGTCGAATTTCCAGGATTGGAGGAATCCTTGTTTGCAGCCTaGCCACCCCAGGCAGCCAGT +
Preference number: 5 (lower is better)
Translates to: LYFQQFKSNCVEFPGLEESLFAA*PPQAAS
Trigger: ACTGGCTGCCTGGGGTGGCAAGGCTGCAAACAAGGA...TTCCTCCAATCCTGGAAATTCGACACAATTAGATTTGAACTGCTGGAAATACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR CAA 90 bp AGCAGTTCAAATCTAATTGTGTCGAATTTCCAGGATTGGAGGAAAAGTTGCTCCAGGATCCCCTTTCCATaGGCAACAATGCTCTGGGCA +
Preference number: 5 (lower is better)
Translates to: SSSNLIVSNFQDWRKSCSRIPFP*ATMLWA
Trigger: TGCCCAGAGCATTGTTGCCAATGGAAAGGGGATCCT...GGAGCAACTTTTCCTCCAATCCTGGAAATTCGACACAATTAGATTTGAACTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR CAA 90 bp TGTTGTATTTCCAGCAGTTCAAATCTAATTGTGTCGAATTTCCAGGATTGGAGGCCTCCTTGGTCTAACTaGATTCCCACCACGATCCCC +
Preference number: 5 (lower is better)
Translates to: CCISSSSNLIVSNFQDWRPPWSN*IPTTIP
Trigger: GGGGATCGTGGTGGGAATCAAGTTAGACCAAGGAGG...CCTCCAATCCTGGAAATTCGACACAATTAGATTTGAACTGCTGGAAATACAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR CAA 90 bp AATCTAATTGTGTCGAATTTCCAGGATTGGAGGAAAAGTTGCTCCCTTTCAGCCTCTGGAGTATACTTCTaGGTGCAGGCATGTCCAGCA +
Preference number: 5 (lower is better)
Translates to: NLIVSNFQDWRKSCSLSASGVYF*VQACPA
Trigger: TGCTGGACATGCCTGCACCAAGAAGTATACTCCAGA...GGCTGAAAGGGAGCAACTTTTCCTCCAATCCTGGAAATTCGACACAATTAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR CAA 90 bp TATTTCCAGCAGTTCAAATCTAATTGTGTCGAATTTCCAGGATTGGAGGAAAAGCTAGGCTGGCGGGCATaGGACCCTAGTAGGTATAGC +
Preference number: 5 (lower is better)
Translates to: YFQQFKSNCVEFPGLEEKLGWRA*DPSRYS
Trigger: GCTATACCTACTAGGGTCCAATGCCCGCCAGCCTAG...CTTTTCCTCCAATCCTGGAAATTCGACACAATTAGATTTGAACTGCTGGAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR CAA 90 bp AGCAGTTCAAATCTAATTGTGTCGAATTTCCAGGATTGGAGGAAAAGTTGCTCCGGATTGGAGGAAAAGTaGCTCCCTTTCAGCCCTCCT +
Preference number: 5 (lower is better)
Translates to: SSSNLIVSNFQDWRKSCSGLEEK*LPFSPP
Trigger: AGGAGGGCTGAAAGGGAGCAACTTTTCCTCCAATCC...GGAGCAACTTTTCCTCCAATCCTGGAAATTCGACACAATTAGATTTGAACTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR CAA 90 bp CAGTTCAAATCTAATTGTGTCGAATTTCCAGGATTGGAGGAAAAGTTGCTCCCTGGGGAGCTGAAAGTGTaGCAAGGAAACTGCTGTGTG +
Preference number: 5 (lower is better)
Translates to: QFKSNCVEFPGLEEKLLPGELKV*QGNCCV
Trigger: CACACAGCAGTTTCCTTGCAACACTTTCAGCTCCCC...AGGGAGCAACTTTTCCTCCAATCCTGGAAATTCGACACAATTAGATTTGAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
CDS-3UTR CAA 90 bp TTCAAATCTAATTGTGTCGAATTTCCAGGATTGGAGGAAAAGTTGCTCCCTTTCTCAGTGTTTTCCACCTaGATCCTCTGCAGGCGGTTC +
Preference number: 5 (lower is better)
Translates to: FKSNCVEFPGLEEKLLPFSVFST*ILCRRF
Trigger: GAACCGCCTGCAGAGGATCAAGGTGGAAAACACTGA...GAAAGGGAGCAACTTTTCCTCCAATCCTGGAAATTCGACACAATTAGATTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR CAA 90 bp TCTGAAGTGTTTCTGTTGAAATTGTCCTTCAGTCTCCTGTCATCAACTATACTCTCAGTGTTTTCCACCTaGATCCTCTGCAGGCGGTTC +
Preference number: 5 (lower is better)
Translates to: SEVFLLKLSFSLLSSTILSVFST*ILCRRF
Trigger: GAACCGCCTGCAGAGGATCAAGGTGGAAAACACTGA...GAGTATAGTTGATGACAGGAGACTGAAGGACAATTTCAACAGAAACACTTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649902.1
CDS-3UTR CAA 90 bp TATTTCCAGCAGTTCAAATCTAATTGTGTCGAATTTCCAGGATTGGAGGAAAAGCCTCCTTGGTCTAACTaGATTCCCACCACGATCCCC +
Preference number: 5 (lower is better)
Translates to: YFQQFKSNCVEFPGLEEKPPWSN*IPTTIP
Trigger: GGGGATCGTGGTGGGAATCAAGTTAGACCAAGGAGG...CTTTTCCTCCAATCCTGGAAATTCGACACAATTAGATTTGAACTGCTGGAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR CAA 90 bp CAGCAGTTCAAATCTAATTGTGTCGAATTTCCAGGATTGGAGGAAAAGTTGCTCTCTGGAGTATACTTCTaGGTGCAGGCATGTCCAGCA +
Preference number: 5 (lower is better)
Translates to: QQFKSNCVEFPGLEEKLLSGVYF*VQACPA
Trigger: TGCTGGACATGCCTGCACCAAGAAGTATACTCCAGA...GAGCAACTTTTCCTCCAATCCTGGAAATTCGACACAATTAGATTTGAACTGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR CAA 90 bp CTATTATTTTCTTGGGTGGGTATTCTGGAGCATGGGGAGCTGAAAGTGTTGCAATTGATAGCATTGAGGTaGAGAGTGGCATCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: LLFSWVGILEHGELKVLQLIALR*RVASSS
Trigger: TGAAGAGGATGCCACTCTCAACCTCAATGCTATCAA...TTGCAACACTTTCAGCTCCCCATGCTCCAGAATACCCACCCAAGAAAATAATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647789.2
ENST00000648064.1
CDS-3UTR CAA 90 bp TGTTGTATTTCCAGCAGTTCAAATCTAATTGTGTCGAATTTCCAGGATTGGAGGGGGGAGCTGAAAGTGTaGCAAGGAAACTGCTGTGTG +
Preference number: 5 (lower is better)
Translates to: CCISSSSNLIVSNFQDWRGELKV*QGNCCV
Trigger: CACACAGCAGTTTCCTTGCAACACTTTCAGCTCCCC...CCTCCAATCCTGGAAATTCGACACAATTAGATTTGAACTGCTGGAAATACAACA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
CDS-3UTR CAA 90 bp CACATTTTCAAATGCCTAATAGACACTATCGGTAGATACCTTCTTGGCCCAAAGACGATCCCCTTTTCCTaGAGGATGTTTCTGAACAGC +
Preference number: 5 (lower is better)
Translates to: HIFKCLIDTIGRYLLGPKTIPFS*RMFLNS
Trigger: GCTGTTCAGAAACATCCTCAAGGAAAAGGGGATCGT...CTTTGGGCCAAGAAGGTATCTACCGATAGTGTCTATTAGGCATTTGAAAATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000649902.1
CDS-3UTR CAA 90 bp CTTCCCAAAATAAAAAGTATCCTAGGTTCAGTTCTTGGTCCTCTTATCTCCTTCTCTGGAGTATACTTCTaGGTGCAGGCATGTCCAGCA +
Preference number: 5 (lower is better)
Translates to: LPKIKSILGSVLGPLISFSGVYF*VQACPA
Trigger: TGCTGGACATGCCTGCACCAAGAAGTATACTCCAGA...GAAGGAGATAAGAGGACCAAGAACTGAACCTAGGATACTTTTTATTTTGGGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649902.1
CDS-3UTR CAA 90 bp CAGAATGCTTGGTTCACCCTACAATATAATCGCTGCTTTTCTTGGTTGCTTCTCTTGATAGCATTGAGGTaGAGAGTGGCATCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: QNAWFTLQYNRCFSWLLLLIALR*RVASSS
Trigger: TGAAGAGGATGCCACTCTCAACCTCAATGCTATCAA...GAGAAGCAACCAAGAAAAGCAGCGATTATATTGTAGGGTGAACCAAGCATTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649902.1
CDS-3UTR CAA 90 bp TATTTCCAGCAGTTCAAATCTAATTGTGTCGAATTTCCAGGATTGGAGGAAAAGGGATTGGAGGAAAAGTaGCTCCCTTTCAGCCCTCCT +
Preference number: 5 (lower is better)
Translates to: YFQQFKSNCVEFPGLEEKGLEEK*LPFSPP
Trigger: AGGAGGGCTGAAAGGGAGCAACTTTTCCTCCAATCC...CTTTTCCTCCAATCCTGGAAATTCGACACAATTAGATTTGAACTGCTGGAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR CAA 90 bp TATTCTGGAGCATGGGGAGCTGAAAGTGTTGCAAGGAAACTGCTGTGTGAAATTAAGCCTATTATTTTCTaGGGTGGGTATTCTGGAGCA +
Preference number: 5 (lower is better)
Translates to: YSGAWGAESVARKLLCEIKPIIF*GGYSGA
Trigger: TGCTCCAGAATACCCACCCAAGAAAATAATAGGCTT...AATTTCACACAGCAGTTTCCTTGCAACACTTTCAGCTCCCCATGCTCCAGAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647789.2
ENST00000648064.1
CDS-3UTR CAA 90 bp TGTTGTATTTCCAGCAGTTCAAATCTAATTGTGTCGAATTTCCAGGATTGGAGGACGATCCCCTTTTCCTaGAGGATGTTTCTGAACAGC +
Preference number: 5 (lower is better)
Translates to: CCISSSSNLIVSNFQDWRTIPFS*RMFLNS
Trigger: GCTGTTCAGAAACATCCTCAAGGAAAAGGGGATCGT...CCTCCAATCCTGGAAATTCGACACAATTAGATTTGAACTGCTGGAAATACAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR CAA 90 bp AGTTCAAATCTAATTGTGTCGAATTTCCAGGATTGGAGGAAAAGTTGCTCCCTTTGGTGGTTTCTTTGTTaGTTCCTGCAAGAGGAGCAC +
Preference number: 5 (lower is better)
Translates to: SSNLIVSNFQDWRKSCSLWWFLC*FLQEEH
Trigger: GTGCTCCTCTTGCAGGAACAAACAAAGAAACCACCA...AAGGGAGCAACTTTTCCTCCAATCCTGGAAATTCGACACAATTAGATTTGAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR CAA 90 bp AGTGTTTCTGTTGAAATTGTCCTTCAGTCTCCTGTCATCAACTATACTCTAGTGTGGTGGTTTCTTTGTTaGTTCCTGCAAGAGGAGCAC +
Preference number: 5 (lower is better)
Translates to: SVSVEIVLQSPVINYTLVWWFLC*FLQEEH
Trigger: GTGCTCCTCTTGCAGGAACAAACAAAGAAACCACCA...CACTAGAGTATAGTTGATGACAGGAGACTGAAGGACAATTTCAACAGAAACACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649902.1
CDS-3UTR CAA 90 bp GTGTTTCAATCAGCAGTTGTTCTTTGGATGAGGAGCCGATATTGTTTTAAAGCCGGTGGCCATAGCTACTaGTTCTGGAGTATACTTCTT +
Preference number: 5 (lower is better)
Translates to: VFQSAVVLWMRSRYCFKAGGHSY*FWSILL
Trigger: AAGAAGTATACTCCAGAACAAGTAGCTATGGCCACC...GGCTTTAAAACAATATCGGCTCCTCATCCAAAGAACAACTGCTGATTGAAACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647789.2
ENST00000648064.1
CDS-3UTR CAA 90 bp AAATCTAATTGTGTCGAATTTCCAGGATTGGAGGAAAAGTTGCTCCCTTTCAGCGGTGGCCATAGCTACTaGTTCTGGAGTATACTTCTT +
Preference number: 5 (lower is better)
Translates to: KSNCVEFPGLEEKLLPFSGGHSY*FWSILL
Trigger: AAGAAGTATACTCCAGAACAAGTAGCTATGGCCACC...GCTGAAAGGGAGCAACTTTTCCTCCAATCCTGGAAATTCGACACAATTAGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR CAA 90 bp ACTTCTCTACACTCAGCTAATGAGGTGTTTCAATCAGCAGTTGTTCTTTGGATGTTGATAGCATTGAGGTaGAGAGTGGCATCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: TSLHSANEVFQSAVVLWMLIALR*RVASSS
Trigger: TGAAGAGGATGCCACTCTCAACCTCAATGCTATCAA...CATCCAAAGAACAACTGCTGATTGAAACACCTCATTAGCTGAGTGTAGAGAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647789.2
ENST00000648064.1
CDS-3UTR CAA 90 bp ACTTCTCTACACTCAGCTAATGAGGTGTTTCAATCAGCAGTTGTTCTTTGGATGATCAGCAGTTGTTCTTaGGATGAGGAGCCGATATTG +
Preference number: 5 (lower is better)
Translates to: TSLHSANEVFQSAVVLWMISSCS*DEEPIL
Trigger: CAATATCGGCTCCTCATCCAAAGAACAACTGCTGAT...CATCCAAAGAACAACTGCTGATTGAAACACCTCATTAGCTGAGTGTAGAGAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647789.2
ENST00000648064.1
CDS-3UTR CAA 90 bp CCCAACCTACCACTGCTAAGACTGTTTCATAAGATGCACTTCTCTACACTCAGCTTAAAATTTTGCGGCTaGATTCCAATGACTAGCAAG +
Preference number: 5 (lower is better)
Translates to: PNLPLLRLFHKMHFSTLSLKFCG*IPMTSK
Trigger: CTTGCTAGTCATTGGAATCAAGCCGCAAAATTTTAA...GCTGAGTGTAGAGAAGTGCATCTTATGAAACAGTCTTAGCAGTGGTAGGTTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647789.2
CDS-3UTR CAA 90 bp CTTCCCAAAATAAAAAGTATCCTAGGTTCAGTTCTTGGTCCTCTTATCTCCTTCCAATGCTTCTCCGTGTaGGAAAGTCAAGCCCCAAAT +
Preference number: 5 (lower is better)
Translates to: LPKIKSILGSVLGPLISFQCFSV*ESQAPN
Trigger: ATTTGGGGCTTGACTTTCCAACACGGAGAAGCATTG...GAAGGAGATAAGAGGACCAAGAACTGAACCTAGGATACTTTTTATTTTGGGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000649902.1
CDS-3UTR CAA 90 bp TGTTGTATTTCCAGCAGTTCAAATCTAATTGTGTCGAATTTCCAGGATTGGAGGGGTGGCCATAGCTACTaGTTCTGGAGTATACTTCTT +
Preference number: 5 (lower is better)
Translates to: CCISSSSNLIVSNFQDWRGGHSY*FWSILL
Trigger: AAGAAGTATACTCCAGAACAAGTAGCTATGGCCACC...CCTCCAATCCTGGAAATTCGACACAATTAGATTTGAACTGCTGGAAATACAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR CAA 90 bp CAGCAGTTCAAATCTAATTGTGTCGAATTTCCAGGATTGGAGGAAAAGTTGCTCAAGCCTATTATTTTCTaGGGTGGGTATTCTGGAGCA +
Preference number: 5 (lower is better)
Translates to: QQFKSNCVEFPGLEEKLLKPIIF*GGYSGA
Trigger: TGCTCCAGAATACCCACCCAAGAAAATAATAGGCTT...GAGCAACTTTTCCTCCAATCCTGGAAATTCGACACAATTAGATTTGAACTGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647789.2
ENST00000648064.1
CDS-3UTR CAA 90 bp ATGTGTTGTATTTCCAGCAGTTCAAATCTAATTGTGTCGAATTTCCAGGATTGGGGTGGCCATAGCTACTaGTTCTGGAGTATACTTCTT +
Preference number: 5 (lower is better)
Translates to: MCCISSSSNLIVSNFQDWGGHSY*FWSILL
Trigger: AAGAAGTATACTCCAGAACAAGTAGCTATGGCCACC...CCAATCCTGGAAATTCGACACAATTAGATTTGAACTGCTGGAAATACAACACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR CAA 90 bp CTTCAGTCTCCTGTCATCAACTATACTCTAGTGTGGATAATTCAAAATTCTCTCGGTGGCCATAGCTACTaGTTCTGGAGTATACTTCTT +
Preference number: 5 (lower is better)
Translates to: LQSPVINYTLVWIIQNSLGGHSY*FWSILL
Trigger: AAGAAGTATACTCCAGAACAAGTAGCTATGGCCACC...GAGAGAATTTTGAATTATCCACACTAGAGTATAGTTGATGACAGGAGACTGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649902.1
CDS-3UTR CAA 90 bp TTGTATTTCCAGCAGTTCAAATCTAATTGTGTCGAATTTCCAGGATTGGAGGAATTGATAGCATTGAGGTaGAGAGTGGCATCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: LYFQQFKSNCVEFPGLEELIALR*RVASSS
Trigger: TGAAGAGGATGCCACTCTCAACCTCAATGCTATCAA...TTCCTCCAATCCTGGAAATTCGACACAATTAGATTTGAACTGCTGGAAATACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS-3UTR CAA 90 bp ATTTCCAGCAGTTCAAATCTAATTGTGTCGAATTTCCAGGATTGGAGGAAAAGTTTTTCCTCCAGCTATTaGGATTTCCTGCATCTCACT +
Preference number: 5 (lower is better)
Translates to: ISSSSNLIVSNFQDWRKSFSSSY*DFLHLT
Trigger: AGTGAGATGCAGGAAATCCAAATAGCTGGAGGAAAA...ACTTTTCCTCCAATCCTGGAAATTCGACACAATTAGATTTGAACTGCTGGAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648758.1
CDS-3UTR CAA 90 bp AGTGTTTCTGTTGAAATTGTCCTTCAGTCTCCTGTCATCAACTATACTCTAGTGTCTGAAGTGTTTCTGTaGAAATTGTCCTTCAGTCTC +
Preference number: 5 (lower is better)
Translates to: SVSVEIVLQSPVINYTLVSEVFL*KLSFSL
Trigger: GAGACTGAAGGACAATTTCAACAGAAACACTTCAGA...CACTAGAGTATAGTTGATGACAGGAGACTGAAGGACAATTTCAACAGAAACACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649902.1
CDS CAA 90 bp GCCCGCTTCATAAAAGCCTCCTGGGTTGCCTCCTTGTTTGCAGCCTaGCCACCCCAGGCAGCCAGTGCACTGGCCTGCAGGGCCCGTCCA +
Preference number: 6 (lower is better)
Translates to: ARFIKASWVASLFAA*PPQAASALACRARP
Trigger: TGGACGGGCCCTGCAGGCCAGTGCACTGGCTGCCTGGGGTGGCAAGGCTGCAAACAAGGAGGCAACCCAGGAGGCTTTTATGAAGCGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
ENST00000649902.1
CDS CCA 72 bp GTCTGGTGGCCGAAGAGGCAGCGGTGTCCAGTGAGTTaGATTCTGGAGGCGGTGGGAGCCAACACTTGCTGC +
Preference number: 6 (lower is better)
Translates to: VWWPKRQRCPVS*ILEAVGANTCC
Trigger: GCAGCAAGTGTTGGCTCCCACCGCCTCCAGAATCCAACTCACTGGACACCGCTGCCTCTTCGGCCACCAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648064.1
CDS CAA 72 bp GGTCTGGTGGCCGAAGAGGCAGCGGTGTCCAGTGAGTaGGATTCTGGAGGCGGTGGGAGCCAACACTTGCTG +
Preference number: 6 (lower is better)
Translates to: GLVAEEAAVSSE*DSGGGGSQHLL
Trigger: CAGCAAGTGTTGGCTCCCACCGCCTCCAGAATCCAACTCACTGGACACCGCTGCCTCTTCGGCCACCAGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648064.1
CDS CAA 90 bp CAGTTAGCCATGGCCCGCTTCATAAAAGCCTCCTGGGTTGCCTCCTaGTTTGCAGCCTTGCCACCCCAGGCAGCCAGTGCACTGGCCTGC +
Preference number: 6 (lower is better)
Translates to: QLAMARFIKASWVAS*FAALPPQAASALAC
Trigger: GCAGGCCAGTGCACTGGCTGCCTGGGGTGGCAAGGCTGCAAACAAGGAGGCAACCCAGGAGGCTTTTATGAAGCGGGCCATGGCTAACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS TCA 72 bp GACAGGTCTGGTGGCCGAAGAGGCAGCGGTGTCCAGTaGGTTGGATTCTGGAGGCGGTGGGAGCCAACACTT +
Preference number: 6 (lower is better)
Translates to: DRSGGRRGSGVQ*VGFWRRWEPTL
Trigger: AAGTGTTGGCTCCCACCGCCTCCAGAATCCAACTCACTGGACACCGCTGCCTCTTCGGCCACCAGACCTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648064.1
CDS CCA 72 bp CAGGGCGTTGGCGTTTTCCTGGATAGCGAGGCTGGATaGACACTGGTCGGCAATCCTCAGCACAGCACGCCA +
Preference number: 6 (lower is better)
Translates to: QGVGVFLDSEAG*TLVGNPQHSTP
Trigger: TGGCGTGCTGTGCTGAGGATTGCCGACCAGTGTCCATCCAGCCTCGCTATCCAGGAAAACGCCAACGCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
ENST00000649902.1
CDS CAA 90 bp ATGGTGACAGGTCTGGTGGCCGAAGAGGCAGCGGTGTCCAGTGAGTaGGATTCTGGAGGCGGTGGGAGCCAACACTTGCTGCGCATCAGT +
Preference number: 6 (lower is better)
Translates to: MVTGLVAEEAAVSSE*DSGGGGSQHLLRIS
Trigger: ACTGATGCGCAGCAAGTGTTGGCTCCCACCGCCTCCAGAATCCAACTCACTGGACACCGCTGCCTCTTCGGCCACCAGACCTGTCACCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648064.1
CDS CAA 90 bp CATCTTACCATGGCCCGCTTCATAAAAGCCTCCTGGGTTGCCTCCTaGTTTGCAGCCTTGCCACCCCAGGCAGCCAGTGCACTGGCCTGC +
Preference number: 6 (lower is better)
Translates to: HLTMARFIKASWVAS*FAALPPQAASALAC
Trigger: GCAGGCCAGTGCACTGGCTGCCTGGGGTGGCAAGGCTGCAAACAAGGAGGCAACCCAGGAGGCTTTTATGAAGCGGGCCATGGTAAGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649902.1
CDS CAA 90 bp GCGGTGTCCAGTGAGTTGGATTCTGGAGGCGGTGGGAGCCAACACTaGCTGCGCATCAGTGAGCAGAGCCACAGTCAAATCCATGTGACC +
Preference number: 6 (lower is better)
Translates to: AVSSELDSGGGGSQH*LRISEQSHSQIHVT
Trigger: GGTCACATGGATTTGACTGTGGCTCTGCTCACTGATGCGCAGCAAGTGTTGGCTCCCACCGCCTCCAGAATCCAACTCACTGGACACCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648064.1
CDS CCA 72 bp TTGGCGTTTTCCTGGATAGCGAGGCTGGATGGACACTaGTCGGCAATCCTCAGCACAGCACGCCACTTCCCA +
Preference number: 6 (lower is better)
Translates to: LAFSWIARLDGH*SAILSTARHFP
Trigger: TGGGAAGTGGCGTGCTGTGCTGAGGATTGCCGACCAGTGTCCATCCAGCCTCGCTATCCAGGAAAACGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
ENST00000649902.1
CDS CCA 72 bp TGGCAGTTAGCCATGGCCCGCTTCATAAAAGCCTCCTaGGTTGCCTCCTTGTTTGCAGCCTTGCCACCCCAG +
Preference number: 6 (lower is better)
Translates to: WQLAMARFIKAS*VASLFAALPPQ
Trigger: CTGGGGTGGCAAGGCTGCAAACAAGGAGGCAACCCAGGAGGCTTTTATGAAGCGGGCCATGGCTAACTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
CDS TCA 72 bp TGGAGGCGGTGGGAGCCAACACTTGCTGCGCATCAGTaGGCAGAGCCACAGTCAAATCCATGTGACCTTCCA +
Preference number: 6 (lower is better)
Translates to: WRRWEPTLAAHQ*AEPQSNPCDLP
Trigger: TGGAAGGTCACATGGATTTGACTGTGGCTCTGCTCACTGATGCGCAGCAAGTGTTGGCTCCCACCGCCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648064.1
CDS CCA 72 bp TGGCAGTTAGCCATGGCCCGCTTCATAAAAGCCTCCTaGGTTGCCTCCTTGTTTGCAGCCTTGCCACCCAAG +
Preference number: 6 (lower is better)
Translates to: WQLAMARFIKAS*VASLFAALPPK
Trigger: CTTGGGTGGCAAGGCTGCAAACAAGGAGGCAACCCAGGAGGCTTTTATGAAGCGGGCCATGGCTAACTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616752.1
CDS CCA 72 bp CAGCATCTTACCATGGCCCGCTTCATAAAAGCCTCCTaGGTTGCCTCCTTGTTTGCAGCCTTGCCACCCCAG +
Preference number: 6 (lower is better)
Translates to: QHLTMARFIKAS*VASLFAALPPQ
Trigger: CTGGGGTGGCAAGGCTGCAAACAAGGAGGCAACCCAGGAGGCTTTTATGAAGCGGGCCATGGTAAGATGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649902.1
CDS GCA 72 bp TGGCTCAGATGGATGCATGACCAAGACAGTTGGGGGTaGAGACATGCTGTGCAGACCTCTGTGACACCTCTG +
Preference number: 6 (lower is better)
Translates to: WLRWMHDQDSWG*RHAVQTSVTPL
Trigger: CAGAGGTGTCACAGAGGTCTGCACAGCATGTCTGCACCCCCAACTGTCTTGGTCATGCATCCATCTGAGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648906.1
CDS CAA 72 bp AGTGAGTTGGATTCTGGAGGCGGTGGGAGCCAACACTaGCTGCGCATCAGTGAGCAGAGCCACAGTCAAATC +
Preference number: 6 (lower is better)
Translates to: SELDSGGGGSQH*LRISEQSHSQI
Trigger: GATTTGACTGTGGCTCTGCTCACTGATGCGCAGCAAGTGTTGGCTCCCACCGCCTCCAGAATCCAACTCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648064.1
CDS GCA 72 bp AGAGTTGTGCACAGAACCATGGGTGGCTCAGATGGATaGATGACCAAGACAGTTGGGGGTGCAGACATGCTG +
Preference number: 6 (lower is better)
Translates to: RVVHRTMGGSDG*MTKTVGGADML
Trigger: CAGCATGTCTGCACCCCCAACTGTCTTGGTCATGCATCCATCTGAGCCACCCATGGTTCTGTGCACAACTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648906.1
CDS CCA 72 bp TGCGAGAGTTGTGCACAGAACCATGGGTGGCTCAGATaGATGCATGACCAAGACAGTTGGGGGTGCAGACAT +
Preference number: 6 (lower is better)
Translates to: CESCAQNHGWLR*MHDQDSWGCRH
Trigger: ATGTCTGCACCCCCAACTGTCTTGGTCATGCATCCATCTGAGCCACCCATGGTTCTGTGCACAACTCTCGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648906.1
CDS CAA 90 bp CAGTTAGCCATGGCCCGCTTCATAAAAGCCTCCTGGGTTGCCTCCTaGTTTGCAGCCTTGCCACCCAAGAGAAACTTAGTTTCCAGGGCT +
Preference number: 6 (lower is better)
Translates to: QLAMARFIKASWVAS*FAALPPKRNLVSRA
Trigger: AGCCCTGGAAACTAAGTTTCTCTTGGGTGGCAAGGCTGCAAACAAGGAGGCAACCCAGGAGGCTTTTATGAAGCGGGCCATGGCTAACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616752.1
CDS CCA 72 bp AAGCAGATGCCAGGAACAGCTGCAGGAACAGTACGGTaGAGAGCTGTTACGGTGGCCATAGCTACTTGTTCT +
Preference number: 6 (lower is better)
Translates to: KQMPGTAAGTVR*RAVTVAIATCS
Trigger: AGAACAAGTAGCTATGGCCACCGTAACAGCTCTCCACCGTACTGTTCCTGCAGCTGTTCCTGGCATCTGCTT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
ENST00000649902.1
CDS CAA 90 bp TGCAGGAACAGTACGGTGGAGAGCTGTTACGGTGGCCATAGCTACTaGTTCTGGAGTATACTTCTTGGTGCAGGCATGTCCAGCAGTCAC +
Preference number: 6 (lower is better)
Translates to: CRNSTVESCYGGHSY*FWSILLGAGMSSSH
Trigger: GTGACTGCTGGACATGCCTGCACCAAGAAGTATACTCCAGAACAAGTAGCTATGGCCACCGTAACAGCTCTCCACCGTACTGTTCCTGCA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
ENST00000649902.1
CDS CCA 72 bp GTGGAGAGCTGTTACGGTGGCCATAGCTACTTGTTCTaGAGTATACTTCTTGGTGCAGGCATGTCCAGCAGT +
Preference number: 6 (lower is better)
Translates to: VESCYGGHSYLF*SILLGAGMSSS
Trigger: ACTGCTGGACATGCCTGCACCAAGAAGTATACTCCAGAACAAGTAGCTATGGCCACCGTAACAGCTCTCCAC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
ENST00000649902.1
CDS CAA 72 bp AGTACGGTGGAGAGCTGTTACGGTGGCCATAGCTACTaGTTCTGGAGTATACTTCTTGGTGCAGGCATGTCC +
Preference number: 6 (lower is better)
Translates to: STVESCYGGHSY*FWSILLGAGMS
Trigger: GGACATGCCTGCACCAAGAAGTATACTCCAGAACAAGTAGCTATGGCCACCGTAACAGCTCTCCACCGTACT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
ENST00000649902.1
CDS CAA 72 bp GTGTTCACCTTGATTCCCACCACGATCCCCTTTTCCTaGAGGATGTTTCTGAACAGCTTTCCCTGGCTGTCC +
Preference number: 6 (lower is better)
Translates to: VFTLIPTTIPFS*RMFLNSFPWLS
Trigger: GGACAGCCAGGGAAAGCTGTTCAGAAACATCCTCAAGGAAAAGGGGATCGTGGTGGGAATCAAGGTGAACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648906.1
ENST00000650613.1
CDS CAA 72 bp TGGTCTAACTTGATTCCCACCACGATCCCCTTTTCCTaGAGGATGTTTCTGAACAGCTTTCCCTGGCTGTCC +
Preference number: 6 (lower is better)
Translates to: WSNLIPTTIPFS*RMFLNSFPWLS
Trigger: GGACAGCCAGGGAAAGCTGTTCAGAAACATCCTCAAGGAAAAGGGGATCGTGGTGGGAATCAAGTTAGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
ENST00000649902.1
CDS CAA 72 bp TTCCAGGGCTTTGGTAGAGGGCAAAGGTTGATAGCATaGAGGTTGAGAGTGGCATCCTCTTCACTCATGCCA +
Preference number: 6 (lower is better)
Translates to: FQGFGRGQRLIA*RLRVASSSLMP
Trigger: TGGCATGAGTGAAGAGGATGCCACTCTCAACCTCAATGCTATCAACCTTTGCCCTCTACCAAAGCCCTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000616752.1
ENST00000647789.2
ENST00000648064.1
ENST00000648758.1
ENST00000649902.1
CDS CAA 72 bp GAGAAGAGAAATTTGATGAGGAGAATGTTCAGAGTGTaGGCCCTGTCCTTGCCAGTGTGCTTGGAGTTTGCC +
Preference number: 6 (lower is better)
Translates to: EKRNLMRRMFRV*ALSLPVCLEFA
Trigger: GGCAAACTCCAAGCACACTGGCAAGGACAGGGCCAACACTCTGAACATTCTCCTCATCAAATTTCTCTTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648906.1
ENST00000650613.1
CDS CCA 72 bp AGCCCCAAATGTGAACATCATCAAGTAGATAAGAGGTaGCAGCATCTTACCATGGCCCGCTTCATAAAAGCC +
Preference number: 6 (lower is better)
Translates to: SPKCEHHQVDKR*QHLTMARFIKA
Trigger: GGCTTTTATGAAGCGGGCCATGGTAAGATGCTGCCACCTCTTATCTACTTGATGATGTTCACATTTGGGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649902.1