RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ALDH8A1 (Homo sapiens)

Ensembl gene IDs: ENSG00000118514

Ensembl transcript IDs: ENST00000265605.7, ENST00000349305.8, ENST00000367845.6, ENST00000367847.2, ENST00000460753.1, ENST00000534012.1

Found 380 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCGGTGGGCTGGCTCCCGGTGAAGGAGATCAGGGGCACCTCTGGGTaGGACACCAGGGCCTCACCCACCCTGGGCCCGGTTCCAAACACA +
Preference number: 1 (lower is better)
Translates to: AVGWLPVKEIRGTSG*DTRASPTLGPVPNT
Trigger: TGTGTTTGGAACCGGGCCCAGGGTGGGTGAGGCCCTGGTGTCCCACCCAGAGGTGCCCCTGATCTCCTTCACCGGGAGCCAGCCCACCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349305.8
3UTR CCA 90 bp CTCAGCGGTGGGCTGGCTCCCGGTGAAGGAGATCAGGGGCACCTCTaGGTGGGACACCAGGGCCTCACCCACCCTGGGCCCGGTTCCAAA +
Preference number: 1 (lower is better)
Translates to: LSGGLAPGEGDQGHL*VGHQGLTHPGPGSK
Trigger: TTTGGAACCGGGCCCAGGGTGGGTGAGGCCCTGGTGTCCCACCCAGAGGTGCCCCTGATCTCCTTCACCGGGAGCCAGCCCACCGCTGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349305.8
3UTR CCA 90 bp TTGCAGTGGGGAGCGCTCAGCTGGGTGATCCGCTCAGCGGTGGGCTaGCTCCCGGTGAAGGAGATCAGGGGCACCTCTGGGTGGGACACC +
Preference number: 1 (lower is better)
Translates to: LQWGALSWVIRSAVG*LPVKEIRGTSGWDT
Trigger: GGTGTCCCACCCAGAGGTGCCCCTGATCTCCTTCACCGGGAGCCAGCCCACCGCTGAGCGGATCACCCAGCTGAGCGCTCCCCACTGCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349305.8
3UTR CCA 90 bp CAGTTGGTCCAGACCAAGCCAGACTGCAGCTTCTTAGCCACCCGGTaGACGCGCCCCACATTGCTGGACCACACGGTAGCCGCCAGCCCA +
Preference number: 1 (lower is better)
Translates to: QLVQTKPDCSFLATR*TRPTLLDHTVAASP
Trigger: TGGGCTGGCGGCTACCGTGTGGTCCAGCAATGTGGGGCGCGTCCACCGGGTGGCTAAGAAGCTGCAGTCTGGCTTGGTCTGGACCAACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349305.8
3UTR GCA 90 bp TTCAGCTCCCTGATGAGCCAGCAGTTGGTCCAGACCAAGCCAGACTaGAGCTTCTTAGCCACCCGGTGGACGCGCCCCACATTGCTGGAC +
Preference number: 1 (lower is better)
Translates to: FSSLMSQQLVQTKPD*SFLATRWTRPTLLD
Trigger: GTCCAGCAATGTGGGGCGCGTCCACCGGGTGGCTAAGAAGCTGCAGTCTGGCTTGGTCTGGACCAACTGCTGGCTCATCAGGGAGCTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349305.8
3UTR CCA 90 bp CAGCTCACTGGGCTTGGCTATCACAGTGTTCCCTGCAGCCATCGCTaGAGCTATCTTCCAGGTCAGCAAGTAGAGTGGCAAATTCCAGGG +
Preference number: 1 (lower is better)
Translates to: QLTGLGYHSVPCSHR*SYLPGQQVEWQIPG
Trigger: CCCTGGAATTTGCCACTCTACTTGCTGACCTGGAAGATAGCTCCAGCGATGGCTGCAGGGAACACTGTGATAGCCAAGCCCAGTGAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349305.8
3UTR TCA 90 bp AACACCTGCTTTATCCAGGAGTTTGCACAACATCCACGCAGTCACTaGAGTCAGCTCACTGGGCTTGGCTATCACAGTGTTCCCTGCAGC +
Preference number: 1 (lower is better)
Translates to: NTCFIQEFAQHPRSH*SQLTGLGYHSVPCS
Trigger: GCTGCAGGGAACACTGTGATAGCCAAGCCCAGTGAGCTGACTTCAGTGACTGCGTGGATGTTGTGCAAACTCCTGGATAAAGCAGGTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349305.8
3UTR GCA 90 bp TTCATCCTTAATGTCTGTTATCACCGTGGGAAGCATAAAGTAGCCTaGCTGGTTCCTGGCAGGGAGGCTCAACTTATCCACTCCCTCACC +
Preference number: 1 (lower is better)
Translates to: FILNVCYHRGKHKVA*LVPGREAQLIHSLT
Trigger: GGTGAGGGAGTGGATAAGTTGAGCCTCCCTGCCAGGAACCAGGCAGGCTACTTTATGCTTCCCACGGTGATAACAGACATTAAGGATGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349305.8
3UTR TCA 90 bp TCAAGGCATAGCTGGAATTCATGCCATGATTTTCATCTACCACATTaGACAACTGATGCCTGCAGCCAGGCATTGGCCATAGTGGCTCCA +
Preference number: 1 (lower is better)
Translates to: SRHSWNSCHDFHLPH*TTDACSQALAIVAP
Trigger: TGGAGCCACTATGGCCAATGCCTGGCTGCAGGCATCAGTTGTTCAATGTGGTAGATGAAAATCATGGCATGAATTCCAGCTATGCCTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
3UTR CCA 90 bp TTCAATCACCTCCTCTTCACTATCAAAGGGGACGACACACGTCACTaGACCAAATATCTCTTCCGTCATGCAGCAGGATTCATCCTTAAT +
Preference number: 1 (lower is better)
Translates to: FNHLLFTIKGDDTRH*TKYLFRHAAGFILN
Trigger: ATTAAGGATGAATCCTGCTGCATGACGGAAGAGATATTTGGTCCAGTGACGTGTGTCGTCCCCTTTGATAGTGAAGAGGAGGTGATTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349305.8
3UTR-3UTR TCA 90 bp GGCTGGCTCCCGGTGAAGGAGATCAGGGGCACCTCTGGGTGGGACACCAGGGCCCATCCACGCAGTCACTaGAGTCAGCTCACTGGGCTT +
Preference number: 2 (lower is better)
Translates to: GWLPVKEIRGTSGWDTRAHPRSH*SQLTGL
Trigger: AAGCCCAGTGAGCTGACTTCAGTGACTGCGTGGATG...GGCCCTGGTGTCCCACCCAGAGGTGCCCCTGATCTCCTTCACCGGGAGCCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349305.8
3UTR-3UTR CCA 90 bp AGCCACCCGGTGGACGCGCCCCACATTGCTGGACCACACGGTAGCCGCCAGCCCGACGACACACGTCACTaGACCAAATATCTCTTCCGT +
Preference number: 2 (lower is better)
Translates to: SHPVDAPHIAGPHGSRQPDDTRH*TKYLFR
Trigger: ACGGAAGAGATATTTGGTCCAGTGACGTGTGTCGTC...GGGCTGGCGGCTACCGTGTGGTCCAGCAATGTGGGGCGCGTCCACCGGGTGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349305.8
3UTR CAA 90 bp AAGCCAGACTGCAGCTTCTTAGCCACCCGGTGGACGCGCCCCACATaGCTGGACCACACGGTAGCCGCCAGCCCATACTTAACGTTGTTG +
Preference number: 2 (lower is better)
Translates to: KPDCSFLATRWTRPT*LDHTVAASPYLTLL
Trigger: CAACAACGTTAAGTATGGGCTGGCGGCTACCGTGTGGTCCAGCAATGTGGGGCGCGTCCACCGGGTGGCTAAGAAGCTGCAGTCTGGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349305.8
3UTR-3UTR TCA 90 bp GTAGCCTGCCTGGTTCCTGGCAGGGAGGCTCAACTTATCCACTCCCTCACCGCATGGCGTCCTCAAAGATaGTGGCAGGATTCTTGCCCC +
Preference number: 2 (lower is better)
Translates to: VACLVPGREAQLIHSLTAWRPQR*WQDSCP
Trigger: GGGGCAAGAATCCTGCCATCATCTTTGAGGACGCCA...TGCGGTGAGGGAGTGGATAAGTTGAGCCTCCCTGCCAGGAACCAGGCAGGCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349305.8
3UTR CAA 90 bp CCTGGCAGGGAGGCTCAACTTATCCACTCCCTCACCGCACCAAATTaGGGCACCTTCAGCAAGAGCTCTCTTGACGTAACTTCTGACCTG +
Preference number: 2 (lower is better)
Translates to: PGREAQLIHSLTAPN*GTFSKSSLDVTSDL
Trigger: CAGGTCAGAAGTTACGTCAAGAGAGCTCTTGCTGAAGGTGCCCAAATTTGGTGCGGTGAGGGAGTGGATAAGTTGAGCCTCCCTGCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349305.8
3UTR-3UTR TCA 90 bp TACTTAACGTTGTTGGCTCTTTCAATCACCTCCTCTTCACTATCAAAGGGGACGGAGCGCTCAGCTGGGTaGTCCGCTCAGCGGTGGGCT +
Preference number: 2 (lower is better)
Translates to: YLTLLALSITSSSLSKGTERSAG*SAQRWA
Trigger: AGCCCACCGCTGAGCGGATCACCCAGCTGAGCGCTC...CGTCCCCTTTGATAGTGAAGAGGAGGTGATTGAAAGAGCCAACAACGTTAAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349305.8
3UTR-3UTR CCA 90 bp GACCTGACGGTTGCCGGAATGCACTCATCCAGGTTGGCGTCCTCAAAGATGATGTCAGCTCACTGGGCTTaGCTATCACAGTGTTCCCTG +
Preference number: 2 (lower is better)
Translates to: DLTVAGMHSSRLASSKMMSAHWA*LSQCSL
Trigger: CAGGGAACACTGTGATAGCCAAGCCCAGTGAGCTGA...CATCATCTTTGAGGACGCCAACCTGGATGAGTGCATTCCGGCAACCGTCAGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349305.8
3UTR CAA 90 bp CCCACATTGCTGGACCACACGGTAGCCGCCAGCCCATACTTAACGTaGTTGGCTCTTTCAATCACCTCCTCTTCACTATCAAAGGGGACG +
Preference number: 2 (lower is better)
Translates to: PTLLDHTVAASPYLT*LALSITSSSLSKGT
Trigger: CGTCCCCTTTGATAGTGAAGAGGAGGTGATTGAAAGAGCCAACAACGTTAAGTATGGGCTGGCGGCTACCGTGTGGTCCAGCAATGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349305.8
3UTR-3UTR CCA 90 bp CTCAGTGAAGAAGTCGTAAGAGTCCTTGGCTCCCTCTCTACCTATTCCAGAACTTTCTTAGCCACCCGGTaGACGCGCCCCACATTGCTG +
Preference number: 2 (lower is better)
Translates to: LSEEVVRVLGSLSTYSRTFLATR*TRPTLL
Trigger: CAGCAATGTGGGGCGCGTCCACCGGGTGGCTAAGAA...AGTTCTGGAATAGGTAGAGAGGGAGCCAAGGACTCTTACGACTTCTTCACTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349305.8
3UTR CAA 90 bp ACATTGCTGGACCACACGGTAGCCGCCAGCCCATACTTAACGTTGTaGGCTCTTTCAATCACCTCCTCTTCACTATCAAAGGGGACGACA +
Preference number: 2 (lower is better)
Translates to: TLLDHTVAASPYLTL*ALSITSSSLSKGTT
Trigger: TGTCGTCCCCTTTGATAGTGAAGAGGAGGTGATTGAAAGAGCCAACAACGTTAAGTATGGGCTGGCGGCTACCGTGTGGTCCAGCAATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349305.8
3UTR-3UTR GCA 90 bp AAGTTACTAAGAACTGAGGATAAGCTAGAGATAACCTTCTGCCAAGTCAAGGCAATGATCATGGCTCACTaGAGCCTCAACCGCCTGGGC +
Preference number: 2 (lower is better)
Translates to: KLLRTEDKLEITFCQVKAMIMAH*SLNRLG
Trigger: GCCCAGGCGGTTGAGGCTGCAGTGAGCCATGATCAT...TGCCTTGACTTGGCAGAAGGTTATCTCTAGCTTATCCTCAGTTCTTAGTAACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265605.7
ENST00000367845.6
3UTR-3UTR CCA 90 bp CCAAACACAATATTGACCACACCTGGTGGAACACCTGCTTTATCCAGGAGTTTGGGTCAGCAAGTAGAGTaGCAAATTCCAGGGGCTGAT +
Preference number: 2 (lower is better)
Translates to: PNTILTTPGGTPALSRSLGQQVE*QIPGAD
Trigger: ATCAGCCCCTGGAATTTGCCACTCTACTTGCTGACC...CAAACTCCTGGATAAAGCAGGTGTTCCACCAGGTGTGGTCAATATTGTGTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349305.8
3UTR-3UTR GCA 90 bp TACTTAACGTTGTTGGCTCTTTCAATCACCTCCTCTTCACTATCAAAGGGGACGTATCACAGTGTTCCCTaGAGCCATCGCTGGAGCTAT +
Preference number: 2 (lower is better)
Translates to: YLTLLALSITSSSLSKGTYHSVP*SHRWSY
Trigger: ATAGCTCCAGCGATGGCTGCAGGGAACACTGTGATA...CGTCCCCTTTGATAGTGAAGAGGAGGTGATTGAAAGAGCCAACAACGTTAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349305.8
3UTR-3UTR CCA 90 bp GAGGAGCCTGACAACTGGCATCATTGTTCTATCTTCCTACTTATAAGTCTTTTTCCCTGCAGCCATCGCTaGAGCTATCTTCCAGGTCAG +
Preference number: 2 (lower is better)
Translates to: EEPDNWHHCSIFLLISLFPCSHR*SYLPGQ
Trigger: CTGACCTGGAAGATAGCTCCAGCGATGGCTGCAGGG...AAAAAGACTTATAAGTAGGAAGATAGAACAATGATGCCAGTTGTCAGGCTCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000349305.8
3UTR-3UTR CCA 90 bp GTCATGCAGCAGGATTCATCCTTAATGTCTGTTATCACCGTGGGAAGCATAAAGTCACCGCACCAAATTTaGGCACCTTCAGCAAGAGCT +
Preference number: 2 (lower is better)
Translates to: VMQQDSSLMSVITVGSIKSPHQI*APSARA
Trigger: AGCTCTTGCTGAAGGTGCCCAAATTTGGTGCGGTGA...CTTTATGCTTCCCACGGTGATAACAGACATTAAGGATGAATCCTGCTGCATGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349305.8
3UTR-3UTR TCA 90 bp GGTCCAATCAATGATCAATTAGCCATGCTAGTGGCTAATAGACAAGGAGATTATACTCCTGAACTCAAGTaGTCCACCCACCTTGGCCTC +
Preference number: 2 (lower is better)
Translates to: GPINDQLAMLVANRQGDYTPELK*STHLGL
Trigger: GAGGCCAAGGTGGGTGGATCACTTGAGTTCAGGAGT...ATAATCTCCTTGTCTATTAGCCACTAGCATGGCTAATTGATCATTGATTGGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265605.7
ENST00000367845.6
3UTR-3UTR TCA 90 bp AAGTTACTAAGAACTGAGGATAAGCTAGAGATAACCTTCTGCCAAGTCAAGGCAACCACATTGAACAACTaGTGCCTGCAGCCAGGCATT +
Preference number: 2 (lower is better)
Translates to: KLLRTEDKLEITFCQVKATTLNN*CLQPGI
Trigger: AATGCCTGGCTGCAGGCATCAGTTGTTCAATGTGGT...TGCCTTGACTTGGCAGAAGGTTATCTCTAGCTTATCCTCAGTTCTTAGTAACTT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
3UTR-3UTR TCA 90 bp GGTCCAATCAATGATCAATTAGCCATGCTAGTGGCTAATAGACAAGGAGATTATAACCTGGGAGGAGCCTaGCAACTGGCATCATTGTTC +
Preference number: 2 (lower is better)
Translates to: GPINDQLAMLVANRQGDYNLGGA*QLASLF
Trigger: GAACAATGATGCCAGTTGTCAGGCTCCTCCCAGGTT...ATAATCTCCTTGTCTATTAGCCACTAGCATGGCTAATTGATCATTGATTGGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265605.7
ENST00000367845.6
3UTR-3UTR GCA 90 bp AGAGATAACCTTCTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCACCTGGTGGAACACCTaGTTTATCCAGGAGTTTGCA +
Preference number: 2 (lower is better)
Translates to: RDNLLPSQGIAGIHAMIFTWWNT*FIQEFA
Trigger: TGCAAACTCCTGGATAAAGCAGGTGTTCCACCAGGT...GAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAGAAGGTTATCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349305.8
3UTR-3UTR TCA 90 bp AAGTTACTAAGAACTGAGGATAAGCTAGAGATAACCTTCTGCCAAGTCAAGGCATTCCAAACACAATATTaGCCACACCTGGTGGAACAC +
Preference number: 2 (lower is better)
Translates to: KLLRTEDKLEITFCQVKAFQTQY*PHLVEH
Trigger: GTGTTCCACCAGGTGTGGTCAATATTGTGTTTGGAA...TGCCTTGACTTGGCAGAAGGTTATCTCTAGCTTATCCTCAGTTCTTAGTAACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349305.8
3UTR-3UTR CCA 90 bp GAGGAGCCTGACAACTGGCATCATTGTTCTATCTTCCTACTTATAAGTCTTTTTCAGGCTGAAATGCAGTaGAATGATCATGGCTCACTG +
Preference number: 2 (lower is better)
Translates to: EEPDNWHHCSIFLLISLFQAEMQ*NDHGSL
Trigger: CAGTGAGCCATGATCATTCCACTGCATTTCAGCCTG...AAAAAGACTTATAAGTAGGAAGATAGAACAATGATGCCAGTTGTCAGGCTCCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265605.7
ENST00000367845.6
3UTR-3UTR TCA 90 bp AGAGATAACCTTCTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCCTGGAATTCATGCCATaGTTTTCATCTACCACATTG +
Preference number: 2 (lower is better)
Translates to: RDNLLPSQGIAGIHAMIFLEFMP*FSSTTL
Trigger: CAATGTGGTAGATGAAAATCATGGCATGAATTCCAG...GAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAGAAGGTTATCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
3UTR-3UTR GCA 90 bp TCCACATTGAAAATAGACAGTATCTCTTCACTAGTGGGTAAAGTTACTAAGAACTCCCCCAGGCTGAAATaGAGTGGAATGATCATGGCT +
Preference number: 2 (lower is better)
Translates to: STLKIDSISSLVGKVTKNSPRLK*SGMIMA
Trigger: AGCCATGATCATTCCACTGCATTTCAGCCTGGGGGA...GTTCTTAGTAACTTTACCCACTAGTGAAGAGATACTGTCTATTTTCAATGTGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265605.7
ENST00000367845.6
3UTR-3UTR CCA 90 bp GAGGAGCCTGACAACTGGCATCATTGTTCTATCTTCCTACTTATAAGTCTTTTTGAGGAGCCTGACAACTaGCATCATTGTTCTATCTTC +
Preference number: 2 (lower is better)
Translates to: EEPDNWHHCSIFLLISLFEEPDN*HHCSIF
Trigger: GAAGATAGAACAATGATGCCAGTTGTCAGGCTCCTC...AAAAAGACTTATAAGTAGGAAGATAGAACAATGATGCCAGTTGTCAGGCTCCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
3UTR-3UTR TCA 90 bp GAGGAGCCTGACAACTGGCATCATTGTTCTATCTTCCTACTTATAAGTCTTTTTCTGGAATTCATGCCATaGTTTTCATCTACCACATTG +
Preference number: 2 (lower is better)
Translates to: EEPDNWHHCSIFLLISLFLEFMP*FSSTTL
Trigger: CAATGTGGTAGATGAAAATCATGGCATGAATTCCAG...AAAAAGACTTATAAGTAGGAAGATAGAACAATGATGCCAGTTGTCAGGCTCCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
3UTR-3UTR TCA 90 bp AAGTTACTAAGAACTGAGGATAAGCTAGAGATAACCTTCTGCCAAGTCAAGGCAATGAAAGAAACACTATaGAAACATAACCTGGGAGGA +
Preference number: 2 (lower is better)
Translates to: KLLRTEDKLEITFCQVKAMKETL*KHNLGG
Trigger: TCCTCCCAGGTTATGTTTTCATAGTGTTTCTTTCAT...TGCCTTGACTTGGCAGAAGGTTATCTCTAGCTTATCCTCAGTTCTTAGTAACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265605.7
ENST00000367845.6
3UTR-3UTR TCA 90 bp GAGGAGCCTGACAACTGGCATCATTGTTCTATCTTCCTACTTATAAGTCTTTTTACTAAGAAATGGAATTaGTTAGACTCGACCGTAGGA +
Preference number: 2 (lower is better)
Translates to: EEPDNWHHCSIFLLISLFTKKWN*LDSTVG
Trigger: TCCTACGGTCGAGTCTAATCAATTCCATTTCTTAGT...AAAAAGACTTATAAGTAGGAAGATAGAACAATGATGCCAGTTGTCAGGCTCCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265605.7
ENST00000367845.6
3UTR-3UTR GCA 90 bp GCCATGCTAGTGGCTAATAGACAAGGAGATTATCTCCATAATCTCTCCAAAGATCATAGCTGGAATTCATaGCATGATTTTCATCTACCA +
Preference number: 2 (lower is better)
Translates to: AMLVANRQGDYLHNLSKDHSWNS*HDFHLP
Trigger: TGGTAGATGAAAATCATGGCATGAATTCCAGCTATG...ATCTTTGGAGAGATTATGGAGATAATCTCCTTGTCTATTAGCCACTAGCATGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265605.7
ENST00000367845.6
3UTR-3UTR CCA 90 bp CCAATCAATGATCAATTAGCCATGCTAGTGGCTAATAGACAAGGAGATTATCTCAAGTCAAGGCATAGCTaGAATTCATGCCATGATTTT +
Preference number: 2 (lower is better)
Translates to: PINDQLAMLVANRQGDYLKSRHS*NSCHDF
Trigger: AAAATCATGGCATGAATTCCAGCTATGCCTTGACTT...GAGATAATCTCCTTGTCTATTAGCCACTAGCATGGCTAATTGATCATTGATTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265605.7
ENST00000367845.6
3UTR-3UTR CCA 90 bp TCCACATTGAAAATAGACAGTATCTCTTCACTAGTGGGTAAAGTTACTAAGAACAAGTCAAGGCATAGCTaGAATTCATGCCATGATTTT +
Preference number: 2 (lower is better)
Translates to: STLKIDSISSLVGKVTKNKSRHS*NSCHDF
Trigger: AAAATCATGGCATGAATTCCAGCTATGCCTTGACTT...GTTCTTAGTAACTTTACCCACTAGTGAAGAGATACTGTCTATTTTCAATGTGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
3UTR CCA 72 bp GGAGCGCTCAGCTGGGTGATCCGCTCAGCGGTGGGCTaGCTCCCGGTGAAGGAGATCAGGGGCACCTCTGGG +
Preference number: 3 (lower is better)
Translates to: GALSWVIRSAVG*LPVKEIRGTSG
Trigger: CCCAGAGGTGCCCCTGATCTCCTTCACCGGGAGCCAGCCCACCGCTGAGCGGATCACCCAGCTGAGCGCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349305.8
3UTR CCA 72 bp TCCAGGGAGAGCTTTTTGCAGTGGGGAGCGCTCAGCTaGGTGATCCGCTCAGCGGTGGGCTGGCTCCCGGTG +
Preference number: 3 (lower is better)
Translates to: SRESFLQWGALS*VIRSAVGWLPV
Trigger: CACCGGGAGCCAGCCCACCGCTGAGCGGATCACCCAGCTGAGCGCTCCCCACTGCAAAAAGCTCTCCCTGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000349305.8
3UTR CCA 72 bp CAGACCAAGCCAGACTGCAGCTTCTTAGCCACCCGGTaGACGCGCCCCACATTGCTGGACCACACGGTAGCC +
Preference number: 3 (lower is better)
Translates to: QTKPDCSFLATR*TRPTLLDHTVA
Trigger: GGCTACCGTGTGGTCCAGCAATGTGGGGCGCGTCCACCGGGTGGCTAAGAAGCTGCAGTCTGGCTTGGTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349305.8
3UTR-3UTR CAA 90 bp TCCACTCCCTCACCGCACCAAATTTGGGCACCTTCAGCAAGAGCTCTCTTGACGGCCTGCAGCCAGGCATaGGCCATAGTGGCTCCACCA +
Preference number: 3 (lower is better)
Translates to: STPSPHQIWAPSARALLTACSQA*AIVAPP
Trigger: TGGTGGAGCCACTATGGCCAATGCCTGGCTGCAGGC...CGTCAAGAGAGCTCTTGCTGAAGGTGCCCAAATTTGGTGCGGTGAGGGAGTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349305.8
3UTR GCA 72 bp AGTCAGCTCACTGGGCTTGGCTATCACAGTGTTCCCTaGAGCCATCGCTGGAGCTATCTTCCAGGTCAGCAA +
Preference number: 3 (lower is better)
Translates to: SQLTGLGYHSVP*SHRWSYLPGQQ
Trigger: TTGCTGACCTGGAAGATAGCTCCAGCGATGGCTGCAGGGAACACTGTGATAGCCAAGCCCAGTGAGCTGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349305.8
3UTR GCA 72 bp ACTTCTGACCTGGTTGGCAAAGCTGGACCTGACGGTTaGCGGAATGCACTCATCCAGGTTGGCGTCCTCAAA +
Preference number: 3 (lower is better)
Translates to: TSDLVGKAGPDG*RNALIQVGVLK
Trigger: TTTGAGGACGCCAACCTGGATGAGTGCATTCCGGCAACCGTCAGGTCCAGCTTTGCCAACCAGGTCAGAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349305.8
3UTR GCA 72 bp CCACACCTGGTGGAACACCTGCTTTATCCAGGAGTTTaGACAACATCCACGCAGTCACTGAAGTCAGCTCAC +
Preference number: 3 (lower is better)
Translates to: PHLVEHLLYPGV*TTSTQSLKSAH
Trigger: GTGAGCTGACTTCAGTGACTGCGTGGATGTTGTGCAAACTCCTGGATAAAGCAGGTGTTCCACCAGGTGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349305.8
3UTR-3UTR CAA 90 bp AGAGATAACCTTCTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCGCCTGCAGCCAGGCATaGGCCATAGTGGCTCCACCA +
Preference number: 3 (lower is better)
Translates to: RDNLLPSQGIAGIHAMIFACSQA*AIVAPP
Trigger: TGGTGGAGCCACTATGGCCAATGCCTGGCTGCAGGC...GAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAGAAGGTTATCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
3UTR-3UTR CAA 90 bp GGTTCCAAACACAATATTGACCACACCTGGTGGAACACCTGCTTTATCCAGGAGGTCAGCTCACTGGGCTaGGCTATCACAGTGTTCCCT +
Preference number: 3 (lower is better)
Translates to: GSKHNIDHTWWNTCFIQEVSSLG*AITVFP
Trigger: AGGGAACACTGTGATAGCCAAGCCCAGTGAGCTGAC...CTCCTGGATAAAGCAGGTGTTCCACCAGGTGTGGTCAATATTGTGTTTGGAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349305.8
3UTR-3UTR CAA 90 bp CTCAGTGAAGAAGTCGTAAGAGTCCTTGGCTCCCTCTCTACCTATTCCAGAACTCTCACCGCACCAAATTaGGGCACCTTCAGCAAGAGC +
Preference number: 3 (lower is better)
Translates to: LSEEVVRVLGSLSTYSRTLTAPN*GTFSKS
Trigger: GCTCTTGCTGAAGGTGCCCAAATTTGGTGCGGTGAG...AGTTCTGGAATAGGTAGAGAGGGAGCCAAGGACTCTTACGACTTCTTCACTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349305.8
3UTR GCA 72 bp AATGTCTGTTATCACCGTGGGAAGCATAAAGTAGCCTaGCTGGTTCCTGGCAGGGAGGCTCAACTTATCCAC +
Preference number: 3 (lower is better)
Translates to: NVCYHRGKHKVA*LVPGREAQLIH
Trigger: GTGGATAAGTTGAGCCTCCCTGCCAGGAACCAGGCAGGCTACTTTATGCTTCCCACGGTGATAACAGACATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349305.8
3UTR-3UTR CAA 90 bp CCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCATCTACCACATTGAAGCCTGCAGCCAGGCATaGGCCATAGTGGCTCCACCA +
Preference number: 3 (lower is better)
Translates to: PSQGIAGIHAMIFIYHIEACSQA*AIVAPP
Trigger: TGGTGGAGCCACTATGGCCAATGCCTGGCTGCAGGC...TTCAATGTGGTAGATGAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
3UTR-3UTR CAA 90 bp GAGGAGCCTGACAACTGGCATCATTGTTCTATCTTCCTACTTATAAGTCTTTTTTGGACGCGCCCCACATaGCTGGACCACACGGTAGCC +
Preference number: 3 (lower is better)
Translates to: EEPDNWHHCSIFLLISLFWTRPT*LDHTVA
Trigger: GGCTACCGTGTGGTCCAGCAATGTGGGGCGCGTCCA...AAAAAGACTTATAAGTAGGAAGATAGAACAATGATGCCAGTTGTCAGGCTCCTC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000349305.8
3UTR CCA 72 bp CTCCTCTTCACTATCAAAGGGGACGACACACGTCACTaGACCAAATATCTCTTCCGTCATGCAGCAGGATTC +
Preference number: 3 (lower is better)
Translates to: LLFTIKGDDTRH*TKYLFRHAAGF
Trigger: GAATCCTGCTGCATGACGGAAGAGATATTTGGTCCAGTGACGTGTGTCGTCCCCTTTGATAGTGAAGAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349305.8
3UTR TCA 72 bp TTTATCCAGGAGTTTGCACAACATCCACGCAGTCACTaGAGTCAGCTCACTGGGCTTGGCTATCACAGTGTT +
Preference number: 3 (lower is better)
Translates to: FIQEFAQHPRSH*SQLTGLGYHSV
Trigger: AACACTGTGATAGCCAAGCCCAGTGAGCTGACTTCAGTGACTGCGTGGATGTTGTGCAAACTCCTGGATAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349305.8
3UTR-3UTR CAA 90 bp TCCACATTGAAAATAGACAGTATCTCTTCACTAGTGGGTAAAGTTACTAAGAACGCCTGCAGCCAGGCATaGGCCATAGTGGCTCCACCA +
Preference number: 3 (lower is better)
Translates to: STLKIDSISSLVGKVTKNACSQA*AIVAPP
Trigger: TGGTGGAGCCACTATGGCCAATGCCTGGCTGCAGGC...GTTCTTAGTAACTTTACCCACTAGTGAAGAGATACTGTCTATTTTCAATGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
3UTR-3UTR CAA 90 bp TACTTAACGTTGTTGGCTCTTTCAATCACCTCCTCTTCACTATCAAAGGGGACGATGCACTCATCCAGGTaGGCGTCCTCAAAGATGATG +
Preference number: 3 (lower is better)
Translates to: YLTLLALSITSSSLSKGTMHSSR*ASSKMM
Trigger: CATCATCTTTGAGGACGCCAACCTGGATGAGTGCAT...CGTCCCCTTTGATAGTGAAGAGGAGGTGATTGAAAGAGCCAACAACGTTAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349305.8
3UTR-3UTR CAA 90 bp AAGTTACTAAGAACTGAGGATAAGCTAGAGATAACCTTCTGCCAAGTCAAGGCAGCTTTATCCAGGAGTTaGCACAACATCCACGCAGTC +
Preference number: 3 (lower is better)
Translates to: KLLRTEDKLEITFCQVKAALSRS*HNIHAV
Trigger: GACTGCGTGGATGTTGTGCAAACTCCTGGATAAAGC...TGCCTTGACTTGGCAGAAGGTTATCTCTAGCTTATCCTCAGTTCTTAGTAACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349305.8
3UTR-3UTR CAA 90 bp GTCATGCAGCAGGATTCATCCTTAATGTCTGTTATCACCGTGGGAAGCATAAAGGTTCCAAACACAATATaGACCACACCTGGTGGAACA +
Preference number: 3 (lower is better)
Translates to: VMQQDSSLMSVITVGSIKVPNTI*TTPGGT
Trigger: TGTTCCACCAGGTGTGGTCAATATTGTGTTTGGAAC...CTTTATGCTTCCCACGGTGATAACAGACATTAAGGATGAATCCTGCTGCATGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349305.8
3UTR-3UTR CAA 90 bp GTCATGCAGCAGGATTCATCCTTAATGTCTGTTATCACCGTGGGAAGCATAAAGTTTTCCGAGTCCACATaGAAAATAGACAGTATCTCT +
Preference number: 3 (lower is better)
Translates to: VMQQDSSLMSVITVGSIKFSEST*KIDSIS
Trigger: AGAGATACTGTCTATTTTCAATGTGGACTCGGAAAA...CTTTATGCTTCCCACGGTGATAACAGACATTAAGGATGAATCCTGCTGCATGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349305.8
3UTR CCA 72 bp CACTATGAAAACATAACCTGGGAGGAGCCTGACAACTaGCATCATTGTTCTATCTTCCTACTTATAAGTCTT +
Preference number: 3 (lower is better)
Translates to: HYENITWEEPDN*HHCSIFLLISL
Trigger: AAGACTTATAAGTAGGAAGATAGAACAATGATGCCAGTTGTCAGGCTCCTCCCAGGTTATGTTTTCATAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265605.7
ENST00000367845.6
CDS-3UTR CCA 90 bp AGCCACCCGGTGGACGCGCCCCACATTGCTGGACCACACGGTAGCCGCCAGCCCGGGCCTCACCCACCCTaGGCCCGGTTCCAAACACAA +
Preference number: 4 (lower is better)
Translates to: SHPVDAPHIAGPHGSRQPGPHPP*ARFQTQ
Trigger: TTGTGTTTGGAACCGGGCCCAGGGTGGGTGAGGCCC...GGGCTGGCGGCTACCGTGTGGTCCAGCAATGTGGGGCGCGTCCACCGGGTGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349305.8
CDS-3UTR GCA 90 bp CAGCTGGGTGATCCGCTCAGCGGTGGGCTGGCTCCCGGTGAAGGAGATCAGGGGAGCGCTCCTGGGGGCTaGGGGATGACCAGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: QLGDPLSGGLAPGEGDQGSAPGG*GMTSWE
Trigger: TTCCCAGCTGGTCATCCCGCAGCCCCCAGGAGCGCT...CCCCTGATCTCCTTCACCGGGAGCCAGCCCACCGCTGAGCGGATCACCCAGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000349305.8
CDS-3UTR TCA 90 bp GCCACCCGGTGGACGCGCCCCACATTGCTGGACCACACGGTAGCCGCCAGCCCATGGCAAAGCTGGACCTaGCGGTTGCCGGAATGCACT +
Preference number: 4 (lower is better)
Translates to: ATRWTRPTLLDHTVAASPWQSWT*RLPECT
Trigger: AGTGCATTCCGGCAACCGTCAGGTCCAGCTTTGCCA...TGGGCTGGCGGCTACCGTGTGGTCCAGCAATGTGGGGCGCGTCCACCGGGTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349305.8
CDS-3UTR TCA 90 bp TGGGACACCAGGGCCTCACCCACCCTGGGCCCGGTTCCAAACACAATATTGACCCTGGTTCAGGACCCGTaGGCGCTCCTGGGGGCTGCG +
Preference number: 4 (lower is better)
Translates to: WDTRASPTLGPVPNTILTLVQDP*ALLGAA
Trigger: CGCAGCCCCCAGGAGCGCTCACGGGTCCTGAACCAG...GGTCAATATTGTGTTTGGAACCGGGCCCAGGGTGGGTGAGGCCCTGGTGTCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000349305.8
CDS-3UTR GCA 90 bp TGGGGAGCGCTCAGCTGGGTGATCCGCTCAGCGGTGGGCTGGCTCCCGGTGAAGCACTCTGACGTGTGGTaGAGGCTGGAGGAAGCGAAG +
Preference number: 4 (lower is better)
Translates to: WGALSWVIRSAVGWLPVKHSDVW*RLEEAK
Trigger: CTTCGCTTCCTCCAGCCTGCACCACACGTCAGAGTG...CTTCACCGGGAGCCAGCCCACCGCTGAGCGGATCACCCAGCTGAGCGCTCCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349305.8
CDS-3UTR GCA 90 bp GCTCCCGGTGAAGGAGATCAGGGGCACCTCTGGGTGGGACACCAGGGCCTCACCGGTGGTCCATCTGCGTaGACTCTGACGTGTGGTGCA +
Preference number: 4 (lower is better)
Translates to: APGEGDQGHLWVGHQGLTGGPSA*TLTCGA
Trigger: TGCACCACACGTCAGAGTGCACGCAGATGGACCACC...GGTGAGGCCCTGGTGTCCCACCCAGAGGTGCCCCTGATCTCCTTCACCGGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349305.8
CDS-3UTR CCA 90 bp GCCACCCGGTGGACGCGCCCCACATTGCTGGACCACACGGTAGCCGCCAGCCCAGACGACACACGTCACTaGACCAAATATCTCTTCCGT +
Preference number: 4 (lower is better)
Translates to: ATRWTRPTLLDHTVAASPDDTRH*TKYLFR
Trigger: ACGGAAGAGATATTTGGTCCAGTGACGTGTGTCGTC...TGGGCTGGCGGCTACCGTGTGGTCCAGCAATGTGGGGCGCGTCCACCGGGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349305.8
3UTR CAA 72 bp TGCAGCTTCTTAGCCACCCGGTGGACGCGCCCCACATaGCTGGACCACACGGTAGCCGCCAGCCCATACTTA +
Preference number: 4 (lower is better)
Translates to: CSFLATRWTRPT*LDHTVAASPYL
Trigger: TAAGTATGGGCTGGCGGCTACCGTGTGGTCCAGCAATGTGGGGCGCGTCCACCGGGTGGCTAAGAAGCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349305.8
CDS-3UTR CCA 90 bp AAGCTGGACCTGACGGTTGCCGGAATGCACTCATCCAGGTTGGCGTCCTCAAAGCGCTCAGCGGTGGGCTaGCTCCCGGTGAAGGAGATC +
Preference number: 4 (lower is better)
Translates to: KLDLTVAGMHSSRLASSKRSAVG*LPVKEI
Trigger: GATCTCCTTCACCGGGAGCCAGCCCACCGCTGAGCG...CTTTGAGGACGCCAACCTGGATGAGTGCATTCCGGCAACCGTCAGGTCCAGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349305.8
CDS-3UTR CCA 90 bp TTATCCAGGAGTTTGCACAACATCCACGCAGTCACTGAAGTCAGCTCACTGGGCAGGGGCACCTCTGGGTaGGACACCAGGGCCTCACCC +
Preference number: 4 (lower is better)
Translates to: LSRSLHNIHAVTEVSSLGRGTSG*DTRASP
Trigger: GGGTGAGGCCCTGGTGTCCCACCCAGAGGTGCCCCT...GCCCAGTGAGCTGACTTCAGTGACTGCGTGGATGTTGTGCAAACTCCTGGATAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349305.8
CDS-3UTR CCA 90 bp GCCACCCGGTGGACGCGCCCCACATTGCTGGACCACACGGTAGCCGCCAGCCCAAAGTCAAGGCATAGCTaGAATTCATGCCATGATTTT +
Preference number: 4 (lower is better)
Translates to: ATRWTRPTLLDHTVAASPKSRHS*NSCHDF
Trigger: AAAATCATGGCATGAATTCCAGCTATGCCTTGACTT...TGGGCTGGCGGCTACCGTGTGGTCCAGCAATGTGGGGCGCGTCCACCGGGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349305.8
CDS-3UTR TCA 90 bp CCTCCTCTTCACTATCAAAGGGGACGACACACGTCACTGGACCAAATATCTCTTGAGCGCTCAGCTGGGTaGTCCGCTCAGCGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: PPLHYQRGRHTSLDQISLERSAG*SAQRWA
Trigger: AGCCCACCGCTGAGCGGATCACCCAGCTGAGCGCTC...AAGAGATATTTGGTCCAGTGACGTGTGTCGTCCCCTTTGATAGTGAAGAGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349305.8
3UTR CAA 72 bp GCCTCACCCACCCTGGGCCCGGTTCCAAACACAATATaGACCACACCTGGTGGAACACCTGCTTTATCCAGG +
Preference number: 4 (lower is better)
Translates to: ASPTLGPVPNTI*TTPGGTPALSR
Trigger: CCTGGATAAAGCAGGTGTTCCACCAGGTGTGGTCAATATTGTGTTTGGAACCGGGCCCAGGGTGGGTGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349305.8
3UTR CAA 72 bp CTGGACCTGACGGTTGCCGGAATGCACTCATCCAGGTaGGCGTCCTCAAAGATGATGGCAGGATTCTTGCCC +
Preference number: 4 (lower is better)
Translates to: LDLTVAGMHSSR*ASSKMMAGFLP
Trigger: GGGCAAGAATCCTGCCATCATCTTTGAGGACGCCAACCTGGATGAGTGCATTCCGGCAACCGTCAGGTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349305.8
CDS-3UTR GCA 90 bp TTATCCAGGAGTTTGCACAACATCCACGCAGTCACTGAAGTCAGCTCACTGGGCCCCAGGTGGTCCATCTaGGTGCACTCTGACGTGTGG +
Preference number: 4 (lower is better)
Translates to: LSRSLHNIHAVTEVSSLGPRWSI*VHSDVW
Trigger: CCACACGTCAGAGTGCACGCAGATGGACCACCTGGG...GCCCAGTGAGCTGACTTCAGTGACTGCGTGGATGTTGTGCAAACTCCTGGATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349305.8
CDS-3UTR CCA 90 bp GATGGTTTTGATCTCAGTGAAGAAGTCGTAAGAGTCCTTGGCTCCCTCTCTACCGATCAGGGGCACCTCTaGGTGGGACACCAGGGCCTC +
Preference number: 4 (lower is better)
Translates to: DGFDLSEEVVRVLGSLSTDQGHL*VGHQGL
Trigger: GAGGCCCTGGTGTCCCACCCAGAGGTGCCCCTGATC...GGTAGAGAGGGAGCCAAGGACTCTTACGACTTCTTCACTGAGATCAAAACCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349305.8
CDS-3UTR CCA 90 bp TCCTCTTCACTATCAAAGGGGACGACACACGTCACTGGACCAAATATCTCTTCCTGGGGAGCGCTCAGCTaGGTGATCCGCTCAGCGGTG +
Preference number: 4 (lower is better)
Translates to: SSSLSKGTTHVTGPNISSWGALS*VIRSAV
Trigger: CACCGCTGAGCGGATCACCCAGCTGAGCGCTCCCCA...GGAAGAGATATTTGGTCCAGTGACGTGTGTCGTCCCCTTTGATAGTGAAGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349305.8
CDS-3UTR CCA 90 bp TTATCCAGGAGTTTGCACAACATCCACGCAGTCACTGAAGTCAGCTCACTGGGCTTCTTAGCCACCCGGTaGACGCGCCCCACATTGCTG +
Preference number: 4 (lower is better)
Translates to: LSRSLHNIHAVTEVSSLGFLATR*TRPTLL
Trigger: CAGCAATGTGGGGCGCGTCCACCGGGTGGCTAAGAA...GCCCAGTGAGCTGACTTCAGTGACTGCGTGGATGTTGTGCAAACTCCTGGATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349305.8
CDS-3UTR TCA 90 bp CAAGTAGCTGGGGCTATAGGCAGAGGGCACCACACCAAGCTAATTTTTAAACTTCTGGGGGCTGCGGGATaGCCAGCTGGGAAAGGCTTC +
Preference number: 4 (lower is better)
Translates to: QVAGAIGRGHHTKLIFKLLGAAG*PAGKGF
Trigger: GAAGCCTTTCCCAGCTGGTCATCCCGCAGCCCCCAG...AAGTTTAAAAATTAGCTTGGTGTGGTGCCCTCTGCCTATAGCCCCAGCTACTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000265605.7
ENST00000367845.6
CDS-3UTR TCA 90 bp GCTAGAGATAACCTTCTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTGAGCGCTCAGCTGGGTaGTCCGCTCAGCGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: ARDNLLPSQGIAGIHAMIERSAG*SAQRWA
Trigger: AGCCCACCGCTGAGCGGATCACCCAGCTGAGCGCTC...AATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAGAAGGTTATCTCTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR TCA 90 bp AAGCTGGACCTGACGGTTGCCGGAATGCACTCATCCAGGTTGGCGTCCTCAAAGACCACATTGAACAACTaGTGCCTGCAGCCAGGCATT +
Preference number: 4 (lower is better)
Translates to: KLDLTVAGMHSSRLASSKTTLNN*CLQPGI
Trigger: AATGCCTGGCTGCAGGCATCAGTTGTTCAATGTGGT...CTTTGAGGACGCCAACCTGGATGAGTGCATTCCGGCAACCGTCAGGTCCAGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349305.8
CDS-3UTR CCA 90 bp GCTAGAGATAACCTTCTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTACCCGTGAGCGCTCCTaGGGGCTGCGGGATGACCAG +
Preference number: 4 (lower is better)
Translates to: ARDNLLPSQGIAGIHAMITRERS*GLRDDQ
Trigger: CTGGTCATCCCGCAGCCCCCAGGAGCGCTCACGGGT...AATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAGAAGGTTATCTCTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR CCA 90 bp GCTAGAGATAACCTTCTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTAGGGGCACCTCTGGGTaGGACACCAGGGCCTCACCC +
Preference number: 4 (lower is better)
Translates to: ARDNLLPSQGIAGIHAMIRGTSG*DTRASP
Trigger: GGGTGAGGCCCTGGTGTCCCACCCAGAGGTGCCCCT...AATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAGAAGGTTATCTCTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR TCA 90 bp GCCATGCTAGTGGCTAATAGACAAGGAGATTATCTCCATAATCTCTCCAAAGATCTGGTTCAGGACCCGTaGGCGCTCCTGGGGGCTGCG +
Preference number: 4 (lower is better)
Translates to: AMLVANRQGDYLHNLSKDLVQDP*ALLGAA
Trigger: CGCAGCCCCCAGGAGCGCTCACGGGTCCTGAACCAG...ATCTTTGGAGAGATTATGGAGATAATCTCCTTGTCTATTAGCCACTAGCATGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265605.7
ENST00000367845.6
CDS-3UTR TCA 90 bp AAGTTACTAAGAACTGAGGATAAGCTAGAGATAACCTTCTGCCAAGTCAAGGCACTGGTTCAGGACCCGTaGGCGCTCCTGGGGGCTGCG +
Preference number: 4 (lower is better)
Translates to: KLLRTEDKLEITFCQVKALVQDP*ALLGAA
Trigger: CGCAGCCCCCAGGAGCGCTCACGGGTCCTGAACCAG...TGCCTTGACTTGGCAGAAGGTTATCTCTAGCTTATCCTCAGTTCTTAGTAACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR TCA 90 bp CCAAATTTGGGCACCTTCAGCAAGAGCTCTCTTGACGTAACTTCTGACCTGGTTCATCTGCGTGCACTCTaGCGTGTGGTGCAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: PNLGTFSKSSLDVTSDLVHLRAL*RVVQAG
Trigger: TCCAGCCTGCACCACACGTCAGAGTGCACGCAGATG...AACCAGGTCAGAAGTTACGTCAAGAGAGCTCTTGCTGAAGGTGCCCAAATTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349305.8
CDS-3UTR CCA 90 bp CTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCATCTACCACATTACCCGTGAGCGCTCCTaGGGGCTGCGGGATGACCAG +
Preference number: 4 (lower is better)
Translates to: LPSQGIAGIHAMIFIYHITRERS*GLRDDQ
Trigger: CTGGTCATCCCGCAGCCCCCAGGAGCGCTCACGGGT...AATGTGGTAGATGAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR CCA 90 bp CAAGTAGCTGGGGCTATAGGCAGAGGGCACCACACCAAGCTAATTTTTAAACTTGGGCCTCACCCACCCTaGGCCCGGTTCCAAACACAA +
Preference number: 4 (lower is better)
Translates to: QVAGAIGRGHHTKLIFKLGPHPP*ARFQTQ
Trigger: TTGTGTTTGGAACCGGGCCCAGGGTGGGTGAGGCCC...AAGTTTAAAAATTAGCTTGGTGTGGTGCCCTCTGCCTATAGCCCCAGCTACTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265605.7
ENST00000367845.6
CDS-3UTR CCA 90 bp AGAGATAACCTTCTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCAGGGGCACCTCTGGGTaGGACACCAGGGCCTCACCC +
Preference number: 4 (lower is better)
Translates to: RDNLLPSQGIAGIHAMIFRGTSG*DTRASP
Trigger: GGGTGAGGCCCTGGTGTCCCACCCAGAGGTGCCCCT...GAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAGAAGGTTATCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR CCA 90 bp GCTAGAGATAACCTTCTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTGATCAGGGGCACCTCTaGGTGGGACACCAGGGCCTC +
Preference number: 4 (lower is better)
Translates to: ARDNLLPSQGIAGIHAMIDQGHL*VGHQGL
Trigger: GAGGCCCTGGTGTCCCACCCAGAGGTGCCCCTGATC...AATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAGAAGGTTATCTCTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR CCA 90 bp GCTAGAGATAACCTTCTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTCGCTCAGCGGTGGGCTaGCTCCCGGTGAAGGAGATC +
Preference number: 4 (lower is better)
Translates to: ARDNLLPSQGIAGIHAMIRSAVG*LPVKEI
Trigger: GATCTCCTTCACCGGGAGCCAGCCCACCGCTGAGCG...AATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAGAAGGTTATCTCTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR CCA 90 bp AAGCTGGACCTGACGGTTGCCGGAATGCACTCATCCAGGTTGGCGTCCTCAAAGAGTCGTAAGAGTCCTTaGCTCCCTCTCTACCTATTC +
Preference number: 4 (lower is better)
Translates to: KLDLTVAGMHSSRLASSKSRKSP*LPLYLF
Trigger: GAATAGGTAGAGAGGGAGCCAAGGACTCTTACGACT...CTTTGAGGACGCCAACCTGGATGAGTGCATTCCGGCAACCGTCAGGTCCAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349305.8
CDS-3UTR TCA 90 bp GCCATGCTAGTGGCTAATAGACAAGGAGATTATCTCCATAATCTCTCCAAAGATGAGCGCTCAGCTGGGTaGTCCGCTCAGCGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: AMLVANRQGDYLHNLSKDERSAG*SAQRWA
Trigger: AGCCCACCGCTGAGCGGATCACCCAGCTGAGCGCTC...ATCTTTGGAGAGATTATGGAGATAATCTCCTTGTCTATTAGCCACTAGCATGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265605.7
ENST00000367845.6
CDS-3UTR TCA 90 bp CAAGGCATAGCTGGAATTCATGCCATGATTTTCATCTACCACATTGAACAACTGGAGCGCTCAGCTGGGTaGTCCGCTCAGCGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: QGIAGIHAMIFIYHIEQLERSAG*SAQRWA
Trigger: AGCCCACCGCTGAGCGGATCACCCAGCTGAGCGCTC...CAGTTGTTCAATGTGGTAGATGAAAATCATGGCATGAATTCCAGCTATGCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR TCA 90 bp GTAGCCTGCCTGGTTCCTGGCAGGGAGGCTCAACTTATCCACTCCCTCACCGCACTGGAATTCATGCCATaGTTTTCATCTACCACATTG +
Preference number: 4 (lower is better)
Translates to: VACLVPGREAQLIHSLTALEFMP*FSSTTL
Trigger: CAATGTGGTAGATGAAAATCATGGCATGAATTCCAG...TGCGGTGAGGGAGTGGATAAGTTGAGCCTCCCTGCCAGGAACCAGGCAGGCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349305.8
CDS-3UTR GCA 90 bp TCTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCATCTACCACATAGCGCTCCTGGGGGCTaGGGGATGACCAGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: SAKSRHSWNSCHDFHLPHSAPGG*GMTSWE
Trigger: TTCCCAGCTGGTCATCCCGCAGCCCCCAGGAGCGCT...ATGTGGTAGATGAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR GCA 90 bp CCAAATTTGGGCACCTTCAGCAAGAGCTCTCTTGACGTAACTTCTGACCTGGTTAACTCCTCCAGGGACTaGTCCAGCAAATCCGCCACC +
Preference number: 4 (lower is better)
Translates to: PNLGTFSKSSLDVTSDLVNSSRD*SSKSAT
Trigger: GGTGGCGGATTTGCTGGAGCAGTCCCTGGAGGAGTT...AACCAGGTCAGAAGTTACGTCAAGAGAGCTCTTGCTGAAGGTGCCCAAATTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349305.8
CDS-3UTR GCA 90 bp CCTCCTCTTCACTATCAAAGGGGACGACACACGTCACTGGACCAAATATCTCTTCAGACCAAGCCAGACTaGAGCTTCTTAGCCACCCGG +
Preference number: 4 (lower is better)
Translates to: PPLHYQRGRHTSLDQISLQTKPD*SFLATR
Trigger: CCGGGTGGCTAAGAAGCTGCAGTCTGGCTTGGTCTG...AAGAGATATTTGGTCCAGTGACGTGTGTCGTCCCCTTTGATAGTGAAGAGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349305.8
CDS-3UTR CCA 90 bp AGAGATAACCTTCTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCGATCAGGGGCACCTCTaGGTGGGACACCAGGGCCTC +
Preference number: 4 (lower is better)
Translates to: RDNLLPSQGIAGIHAMIFDQGHL*VGHQGL
Trigger: GAGGCCCTGGTGTCCCACCCAGAGGTGCCCCTGATC...GAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAGAAGGTTATCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR CCA 90 bp CTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCATCTACCACATTCGCTCAGCGGTGGGCTaGCTCCCGGTGAAGGAGATC +
Preference number: 4 (lower is better)
Translates to: LPSQGIAGIHAMIFIYHIRSAVG*LPVKEI
Trigger: GATCTCCTTCACCGGGAGCCAGCCCACCGCTGAGCG...AATGTGGTAGATGAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR CCA 90 bp AGAGATAACCTTCTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCCGCTCAGCGGTGGGCTaGCTCCCGGTGAAGGAGATC +
Preference number: 4 (lower is better)
Translates to: RDNLLPSQGIAGIHAMIFRSAVG*LPVKEI
Trigger: GATCTCCTTCACCGGGAGCCAGCCCACCGCTGAGCG...GAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAGAAGGTTATCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR TCA 90 bp AACCTTCTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCATCTACCTTCTCTGGCGGCCTTaGCCGCGGCTTCGATCTCGT +
Preference number: 4 (lower is better)
Translates to: NLLPSQGIAGIHAMIFIYLLWRP*PRLRSR
Trigger: ACGAGATCGAAGCCGCGGTCAAGGCCGCCAGAGAAG...GTAGATGAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAGAAGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR TCA 90 bp TCTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCATCTACCACATCTTCTCTGGCGGCCTTaGCCGCGGCTTCGATCTCGT +
Preference number: 4 (lower is better)
Translates to: SAKSRHSWNSCHDFHLPHLLWRP*PRLRSR
Trigger: ACGAGATCGAAGCCGCGGTCAAGGCCGCCAGAGAAG...ATGTGGTAGATGAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR TCA 90 bp CAAGTAGCTGGGGCTATAGGCAGAGGGCACCACACCAAGCTAATTTTTAAACTTGCAAATTCCAGGGGCTaGTCAGACCAGCGACTCCCA +
Preference number: 4 (lower is better)
Translates to: QVAGAIGRGHHTKLIFKLANSRG*SDQRLP
Trigger: TGGGAGTCGCTGGTCTGATCAGCCCCTGGAATTTGC...AAGTTTAAAAATTAGCTTGGTGTGGTGCCCTCTGCCTATAGCCCCAGCTACTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265605.7
ENST00000367845.6
CDS-3UTR GCA 90 bp AAGTTACTAAGAACTGAGGATAAGCTAGAGATAACCTTCTGCCAAGTCAAGGCAAGCGCTCCTGGGGGCTaGGGGATGACCAGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: KLLRTEDKLEITFCQVKASAPGG*GMTSWE
Trigger: TTCCCAGCTGGTCATCCCGCAGCCCCCAGGAGCGCT...TGCCTTGACTTGGCAGAAGGTTATCTCTAGCTTATCCTCAGTTCTTAGTAACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR GCA 90 bp AGTGAAGAAGTCGTAAGAGTCCTTGGCTCCCTCTCTACCTATTCCAGAACTCTTCCAGGGAGAGCTTTTTaGAGTGGGGAGCGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: SEEVVRVLGSLSTYSRTLPGRAF*SGERSA
Trigger: AGCTGAGCGCTCCCCACTGCAAAAAGCTCTCCCTGG...AAGAGTTCTGGAATAGGTAGAGAGGGAGCCAAGGACTCTTACGACTTCTTCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000349305.8
CDS-3UTR CCA 90 bp CAAGTAGCTGGGGCTATAGGCAGAGGGCACCACACCAAGCTAATTTTTAAACTTTGCATGCAGCCCAGGTaGTCCATCTGCGTGCACTCT +
Preference number: 4 (lower is better)
Translates to: QVAGAIGRGHHTKLIFKLCMQPR*SICVHS
Trigger: AGAGTGCACGCAGATGGACCACCTGGGCTGCATGCA...AAGTTTAAAAATTAGCTTGGTGTGGTGCCCTCTGCCTATAGCCCCAGCTACTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265605.7
ENST00000367845.6
CDS-3UTR CCA 90 bp TTATCCAGGAGTTTGCACAACATCCACGCAGTCACTGAAGTCAGCTCACTGGGCGGTCAGCAAGTAGAGTaGCAAATTCCAGGGGCTGAT +
Preference number: 4 (lower is better)
Translates to: LSRSLHNIHAVTEVSSLGGQQVE*QIPGAD
Trigger: ATCAGCCCCTGGAATTTGCCACTCTACTTGCTGACC...GCCCAGTGAGCTGACTTCAGTGACTGCGTGGATGTTGTGCAAACTCCTGGATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349305.8
CDS-3UTR CCA 90 bp CCAATCAATGATCAATTAGCCATGCTAGTGGCTAATAGACAAGGAGATTATCTCAGGGGCACCTCTGGGTaGGACACCAGGGCCTCACCC +
Preference number: 4 (lower is better)
Translates to: PINDQLAMLVANRQGDYLRGTSG*DTRASP
Trigger: GGGTGAGGCCCTGGTGTCCCACCCAGAGGTGCCCCT...GAGATAATCTCCTTGTCTATTAGCCACTAGCATGGCTAATTGATCATTGATTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265605.7
ENST00000367845.6
CDS-3UTR CCA 90 bp CCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCATCTACCACATTGAAGATCAGGGGCACCTCTaGGTGGGACACCAGGGCCTC +
Preference number: 4 (lower is better)
Translates to: PSQGIAGIHAMIFIYHIEDQGHL*VGHQGL
Trigger: GAGGCCCTGGTGTCCCACCCAGAGGTGCCCCTGATC...TTCAATGTGGTAGATGAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
3UTR CAA 72 bp ACCACACCTGGTGGAACACCTGCTTTATCCAGGAGTTaGCACAACATCCACGCAGTCACTGAAGTCAGCTCA +
Preference number: 4 (lower is better)
Translates to: TTPGGTPALSRS*HNIHAVTEVSS
Trigger: TGAGCTGACTTCAGTGACTGCGTGGATGTTGTGCAAACTCCTGGATAAAGCAGGTGTTCCACCAGGTGTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349305.8
3UTR CAA 72 bp GAGGCTCAACTTATCCACTCCCTCACCGCACCAAATTaGGGCACCTTCAGCAAGAGCTCTCTTGACGTAACT +
Preference number: 4 (lower is better)
Translates to: EAQLIHSLTAPN*GTFSKSSLDVT
Trigger: AGTTACGTCAAGAGAGCTCTTGCTGAAGGTGCCCAAATTTGGTGCGGTGAGGGAGTGGATAAGTTGAGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349305.8
3UTR CAA 72 bp CTGGACCACACGGTAGCCGCCAGCCCATACTTAACGTaGTTGGCTCTTTCAATCACCTCCTCTTCACTATCA +
Preference number: 4 (lower is better)
Translates to: LDHTVAASPYLT*LALSITSSSLS
Trigger: TGATAGTGAAGAGGAGGTGATTGAAAGAGCCAACAACGTTAAGTATGGGCTGGCGGCTACCGTGTGGTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349305.8
CDS-3UTR TCA 90 bp GCCATGCTAGTGGCTAATAGACAAGGAGATTATCTCCATAATCTCTCCAAAGATCTTCTCTGGCGGCCTTaGCCGCGGCTTCGATCTCGT +
Preference number: 4 (lower is better)
Translates to: AMLVANRQGDYLHNLSKDLLWRP*PRLRSR
Trigger: ACGAGATCGAAGCCGCGGTCAAGGCCGCCAGAGAAG...ATCTTTGGAGAGATTATGGAGATAATCTCCTTGTCTATTAGCCACTAGCATGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265605.7
ENST00000367845.6
CDS-3UTR TCA 90 bp TCCACATTGAAAATAGACAGTATCTCTTCACTAGTGGGTAAAGTTACTAAGAACCTGGTTCAGGACCCGTaGGCGCTCCTGGGGGCTGCG +
Preference number: 4 (lower is better)
Translates to: STLKIDSISSLVGKVTKNLVQDP*ALLGAA
Trigger: CGCAGCCCCCAGGAGCGCTCACGGGTCCTGAACCAG...GTTCTTAGTAACTTTACCCACTAGTGAAGAGATACTGTCTATTTTCAATGTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR TCA 90 bp CAAGTAGCTGGGGCTATAGGCAGAGGGCACCACACCAAGCTAATTTTTAAACTTAGGAAGCGAAGAACCTaGAGTTCTGCACAGACCGGG +
Preference number: 4 (lower is better)
Translates to: QVAGAIGRGHHTKLIFKLRKRRT*SSAQTG
Trigger: CCCGGTCTGTGCAGAACTTCAGGTTCTTCGCTTCCT...AAGTTTAAAAATTAGCTTGGTGTGGTGCCCTCTGCCTATAGCCCCAGCTACTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265605.7
ENST00000367845.6
CDS-3UTR TCA 90 bp AGAGATAACCTTCTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCCATCTGCGTGCACTCTaGCGTGTGGTGCAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: RDNLLPSQGIAGIHAMIFHLRAL*RVVQAG
Trigger: TCCAGCCTGCACCACACGTCAGAGTGCACGCAGATG...GAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAGAAGGTTATCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR GCA 90 bp GCTAGAGATAACCTTCTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTAACTCCTCCAGGGACTaGTCCAGCAAATCCGCCACC +
Preference number: 4 (lower is better)
Translates to: ARDNLLPSQGIAGIHAMINSSRD*SSKSAT
Trigger: GGTGGCGGATTTGCTGGAGCAGTCCCTGGAGGAGTT...AATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAGAAGGTTATCTCTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR GCA 90 bp GCTAGAGATAACCTTCTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTGGTGGTCCATCTGCGTaGACTCTGACGTGTGGTGCA +
Preference number: 4 (lower is better)
Translates to: ARDNLLPSQGIAGIHAMIGGPSA*TLTCGA
Trigger: TGCACCACACGTCAGAGTGCACGCAGATGGACCACC...AATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAGAAGGTTATCTCTAGC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR GCA 90 bp AACCTTCTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCATCTACCCCAGGTGGTCCATCTaGGTGCACTCTGACGTGTGG +
Preference number: 4 (lower is better)
Translates to: NLLPSQGIAGIHAMIFIYPRWSI*VHSDVW
Trigger: CCACACGTCAGAGTGCACGCAGATGGACCACCTGGG...GTAGATGAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAGAAGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR GCA 90 bp GCTAGAGATAACCTTCTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTGCACCGTGTAGTGCATaGAGCCCAGGTGGTCCATCT +
Preference number: 4 (lower is better)
Translates to: ARDNLLPSQGIAGIHAMIAPCSA*SPGGPS
Trigger: AGATGGACCACCTGGGCTGCATGCACTACACGGTGC...AATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAGAAGGTTATCTCTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR GCA 90 bp GCTAGAGATAACCTTCTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTCCAGGGAGAGCTTTTTaGAGTGGGGAGCGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: ARDNLLPSQGIAGIHAMIPGRAF*SGERSA
Trigger: AGCTGAGCGCTCCCCACTGCAAAAAGCTCTCCCTGG...AATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAGAAGGTTATCTCTAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR GCA 90 bp GTCATGCAGCAGGATTCATCCTTAATGTCTGTTATCACCGTGGGAAGCATAAAGGCTGGACCTGACGGTTaGCGGAATGCACTCATCCAG +
Preference number: 4 (lower is better)
Translates to: VMQQDSSLMSVITVGSIKAGPDG*RNALIQ
Trigger: CTGGATGAGTGCATTCCGGCAACCGTCAGGTCCAGC...CTTTATGCTTCCCACGGTGATAACAGACATTAAGGATGAATCCTGCTGCATGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349305.8
CDS-3UTR GCA 90 bp GCTAGAGATAACCTTCTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTGCTGGACCTGACGGTTaGCGGAATGCACTCATCCAG +
Preference number: 4 (lower is better)
Translates to: ARDNLLPSQGIAGIHAMIAGPDG*RNALIQ
Trigger: CTGGATGAGTGCATTCCGGCAACCGTCAGGTCCAGC...AATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAGAAGGTTATCTCTAGC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR CCA 90 bp CTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCATCTACCACATTAGCAAATCCGCCACCTaGTTCAGGACCCGTGAGCGC +
Preference number: 4 (lower is better)
Translates to: LPSQGIAGIHAMIFIYHISKSAT*FRTRER
Trigger: GCGCTCACGGGTCCTGAACCAGGTGGCGGATTTGCT...AATGTGGTAGATGAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR CCA 90 bp TCTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCATCTACCACATAGCAAATCCGCCACCTaGTTCAGGACCCGTGAGCGC +
Preference number: 4 (lower is better)
Translates to: SAKSRHSWNSCHDFHLPHSKSAT*FRTRER
Trigger: GCGCTCACGGGTCCTGAACCAGGTGGCGGATTTGCT...ATGTGGTAGATGAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR CCA 90 bp CTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCATCTACCACATTGTGCACTCTGACGTGTaGTGCAGGCTGGAGGAAGCG +
Preference number: 4 (lower is better)
Translates to: LPSQGIAGIHAMIFIYHIVHSDV*CRLEEA
Trigger: CGCTTCCTCCAGCCTGCACCACACGTCAGAGTGCAC...AATGTGGTAGATGAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR CCA 90 bp GGTCCAATCAATGATCAATTAGCCATGCTAGTGGCTAATAGACAAGGAGATTATTGGGGAGCGCTCAGCTaGGTGATCCGCTCAGCGGTG +
Preference number: 4 (lower is better)
Translates to: GPINDQLAMLVANRQGDYWGALS*VIRSAV
Trigger: CACCGCTGAGCGGATCACCCAGCTGAGCGCTCCCCA...ATAATCTCCTTGTCTATTAGCCACTAGCATGGCTAATTGATCATTGATTGGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265605.7
ENST00000367845.6
CDS-3UTR CCA 90 bp GCTAGAGATAACCTTCTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTGAGAGCTTTTTGCAGTaGGGAGCGCTCAGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: ARDNLLPSQGIAGIHAMIESFLQ*GALSWV
Trigger: CACCCAGCTGAGCGCTCCCCACTGCAAAAAGCTCTC...AATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAGAAGGTTATCTCTAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR CCA 90 bp AGAGATAACCTTCTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCTTCTTAGCCACCCGGTaGACGCGCCCCACATTGCTG +
Preference number: 4 (lower is better)
Translates to: RDNLLPSQGIAGIHAMIFFLATR*TRPTLL
Trigger: CAGCAATGTGGGGCGCGTCCACCGGGTGGCTAAGAA...GAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAGAAGGTTATCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
3UTR CAA 72 bp GACCACACGGTAGCCGCCAGCCCATACTTAACGTTGTaGGCTCTTTCAATCACCTCCTCTTCACTATCAAAG +
Preference number: 4 (lower is better)
Translates to: DHTVAASPYLTL*ALSITSSSLSK
Trigger: CTTTGATAGTGAAGAGGAGGTGATTGAAAGAGCCAACAACGTTAAGTATGGGCTGGCGGCTACCGTGTGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349305.8
CDS-3UTR TCA 90 bp GCTAGAGATAACCTTCTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTAGGAAGCGAAGAACCTaGAGTTCTGCACAGACCGGG +
Preference number: 4 (lower is better)
Translates to: ARDNLLPSQGIAGIHAMIRKRRT*SSAQTG
Trigger: CCCGGTCTGTGCAGAACTTCAGGTTCTTCGCTTCCT...AATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAGAAGGTTATCTCTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR TCA 90 bp AAGTTACTAAGAACTGAGGATAAGCTAGAGATAACCTTCTGCCAAGTCAAGGCACATCTGCGTGCACTCTaGCGTGTGGTGCAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: KLLRTEDKLEITFCQVKAHLRAL*RVVQAG
Trigger: TCCAGCCTGCACCACACGTCAGAGTGCACGCAGATG...TGCCTTGACTTGGCAGAAGGTTATCTCTAGCTTATCCTCAGTTCTTAGTAACTT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR TCA 90 bp AGAGATAACCTTCTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCTGGCAAAGCTGGACCTaGCGGTTGCCGGAATGCACT +
Preference number: 4 (lower is better)
Translates to: RDNLLPSQGIAGIHAMIFWQSWT*RLPECT
Trigger: AGTGCATTCCGGCAACCGTCAGGTCCAGCTTTGCCA...GAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAGAAGGTTATCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR TCA 90 bp CAAGTAGCTGGGGCTATAGGCAGAGGGCACCACACCAAGCTAATTTTTAAACTTAACCTGGGAGGAGCCTaGCAACTGGCATCATTGTTC +
Preference number: 4 (lower is better)
Translates to: QVAGAIGRGHHTKLIFKLNLGGA*QLASLF
Trigger: GAACAATGATGCCAGTTGTCAGGCTCCTCCCAGGTT...AAGTTTAAAAATTAGCTTGGTGTGGTGCCCTCTGCCTATAGCCCCAGCTACTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265605.7
ENST00000367845.6
CDS-3UTR GCA 90 bp AACCTTCTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCATCTACAACTCCTCCAGGGACTaGTCCAGCAAATCCGCCACC +
Preference number: 4 (lower is better)
Translates to: NLLPSQGIAGIHAMIFIYNSSRD*SSKSAT
Trigger: GGTGGCGGATTTGCTGGAGCAGTCCCTGGAGGAGTT...GTAGATGAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAGAAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR GCA 90 bp CCTCCTCTTCACTATCAAAGGGGACGACACACGTCACTGGACCAAATATCTCTTAAGAACCTGAAGTTCTaGACAGACCGGGGAATGTCC +
Preference number: 4 (lower is better)
Translates to: PPLHYQRGRHTSLDQISLKNLKF*TDRGMS
Trigger: GGACATTCCCCGGTCTGTGCAGAACTTCAGGTTCTT...AAGAGATATTTGGTCCAGTGACGTGTGTCGTCCCCTTTGATAGTGAAGAGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349305.8
CDS-3UTR GCA 90 bp AACCTTCTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCATCTACCACTCTGACGTGTGGTaGAGGCTGGAGGAAGCGAAG +
Preference number: 4 (lower is better)
Translates to: NLLPSQGIAGIHAMIFIYHSDVW*RLEEAK
Trigger: CTTCGCTTCCTCCAGCCTGCACCACACGTCAGAGTG...GTAGATGAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAGAAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR GCA 90 bp CTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCATCTACCACATTGGTGGTCCATCTGCGTaGACTCTGACGTGTGGTGCA +
Preference number: 4 (lower is better)
Translates to: LPSQGIAGIHAMIFIYHIGGPSA*TLTCGA
Trigger: TGCACCACACGTCAGAGTGCACGCAGATGGACCACC...AATGTGGTAGATGAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR GCA 90 bp AGAGATAACCTTCTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCGGTGGTCCATCTGCGTaGACTCTGACGTGTGGTGCA +
Preference number: 4 (lower is better)
Translates to: RDNLLPSQGIAGIHAMIFGGPSA*TLTCGA
Trigger: TGCACCACACGTCAGAGTGCACGCAGATGGACCACC...GAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAGAAGGTTATCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR GCA 90 bp CAAGTAGCTGGGGCTATAGGCAGAGGGCACCACACCAAGCTAATTTTTAAACTTAAGCATAAAGTAGCCTaGCTGGTTCCTGGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: QVAGAIGRGHHTKLIFKLKHKVA*LVPGRE
Trigger: CTCCCTGCCAGGAACCAGGCAGGCTACTTTATGCTT...AAGTTTAAAAATTAGCTTGGTGTGGTGCCCTCTGCCTATAGCCCCAGCTACTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265605.7
ENST00000367845.6
CDS-3UTR GCA 90 bp AACCTTCTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCATCTACCAGACCAAGCCAGACTaGAGCTTCTTAGCCACCCGG +
Preference number: 4 (lower is better)
Translates to: NLLPSQGIAGIHAMIFIYQTKPD*SFLATR
Trigger: CCGGGTGGCTAAGAAGCTGCAGTCTGGCTTGGTCTG...GTAGATGAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAGAAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR GCA 90 bp CTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCATCTACCACATTCAGACCAAGCCAGACTaGAGCTTCTTAGCCACCCGG +
Preference number: 4 (lower is better)
Translates to: LPSQGIAGIHAMIFIYHIQTKPD*SFLATR
Trigger: CCGGGTGGCTAAGAAGCTGCAGTCTGGCTTGGTCTG...AATGTGGTAGATGAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR GCA 90 bp TCTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCATCTACCACATATGATCATGGCTCACTaGAGCCTCAACCGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: SAKSRHSWNSCHDFHLPHMIMAH*SLNRLG
Trigger: GCCCAGGCGGTTGAGGCTGCAGTGAGCCATGATCAT...ATGTGGTAGATGAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265605.7
ENST00000367845.6
CDS-3UTR GCA 90 bp CTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCATCTACCACATTATGATCATGGCTCACTaGAGCCTCAACCGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: LPSQGIAGIHAMIFIYHIMIMAH*SLNRLG
Trigger: GCCCAGGCGGTTGAGGCTGCAGTGAGCCATGATCAT...AATGTGGTAGATGAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265605.7
ENST00000367845.6
CDS-3UTR CCA 90 bp TCCACATTGAAAATAGACAGTATCTCTTCACTAGTGGGTAAAGTTACTAAGAACACCCGTGAGCGCTCCTaGGGGCTGCGGGATGACCAG +
Preference number: 4 (lower is better)
Translates to: STLKIDSISSLVGKVTKNTRERS*GLRDDQ
Trigger: CTGGTCATCCCGCAGCCCCCAGGAGCGCTCACGGGT...GTTCTTAGTAACTTTACCCACTAGTGAAGAGATACTGTCTATTTTCAATGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR CCA 90 bp CCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCATCTACCACATTGAAGTGCACTCTGACGTGTaGTGCAGGCTGGAGGAAGCG +
Preference number: 4 (lower is better)
Translates to: PSQGIAGIHAMIFIYHIEVHSDV*CRLEEA
Trigger: CGCTTCCTCCAGCCTGCACCACACGTCAGAGTGCAC...TTCAATGTGGTAGATGAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR CCA 90 bp AATATCTCTTCCGTCATGCAGCAGGATTCATCCTTAATGTCTGTTATCACCGTGTGCATGCAGCCCAGGTaGTCCATCTGCGTGCACTCT +
Preference number: 4 (lower is better)
Translates to: NISSVMQQDSSLMSVITVCMQPR*SICVHS
Trigger: AGAGTGCACGCAGATGGACCACCTGGGCTGCATGCA...CACGGTGATAACAGACATTAAGGATGAATCCTGCTGCATGACGGAAGAGATATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349305.8
CDS-3UTR CCA 90 bp GGTCCAATCAATGATCAATTAGCCATGCTAGTGGCTAATAGACAAGGAGATTATGGGCCTCACCCACCCTaGGCCCGGTTCCAAACACAA +
Preference number: 4 (lower is better)
Translates to: GPINDQLAMLVANRQGDYGPHPP*ARFQTQ
Trigger: TTGTGTTTGGAACCGGGCCCAGGGTGGGTGAGGCCC...ATAATCTCCTTGTCTATTAGCCACTAGCATGGCTAATTGATCATTGATTGGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265605.7
ENST00000367845.6
CDS-3UTR CCA 90 bp GGTTCCAAACACAATATTGACCACACCTGGTGGAACACCTGCTTTATCCAGGAGTCACCGCACCAAATTTaGGCACCTTCAGCAAGAGCT +
Preference number: 4 (lower is better)
Translates to: GSKHNIDHTWWNTCFIQESPHQI*APSARA
Trigger: AGCTCTTGCTGAAGGTGCCCAAATTTGGTGCGGTGA...CTCCTGGATAAAGCAGGTGTTCCACCAGGTGTGGTCAATATTGTGTTTGGAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349305.8
CDS-3UTR CCA 90 bp CAAGGCATAGCTGGAATTCATGCCATGATTTTCATCTACCACATTGAACAACTGTTCTTAGCCACCCGGTaGACGCGCCCCACATTGCTG +
Preference number: 4 (lower is better)
Translates to: QGIAGIHAMIFIYHIEQLFLATR*TRPTLL
Trigger: CAGCAATGTGGGGCGCGTCCACCGGGTGGCTAAGAA...CAGTTGTTCAATGTGGTAGATGAAAATCATGGCATGAATTCCAGCTATGCCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR TCA 90 bp AGAGATAACCTTCTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCAGGAAGCGAAGAACCTaGAGTTCTGCACAGACCGGG +
Preference number: 4 (lower is better)
Translates to: RDNLLPSQGIAGIHAMIFRKRRT*SSAQTG
Trigger: CCCGGTCTGTGCAGAACTTCAGGTTCTTCGCTTCCT...GAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAGAAGGTTATCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR TCA 90 bp CTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCATCTACCACATTAGGAAGCGAAGAACCTaGAGTTCTGCACAGACCGGG +
Preference number: 4 (lower is better)
Translates to: LPSQGIAGIHAMIFIYHIRKRRT*SSAQTG
Trigger: CCCGGTCTGTGCAGAACTTCAGGTTCTTCGCTTCCT...AATGTGGTAGATGAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR TCA 90 bp CCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCATCTACCACATTGAAGCAAATTCCAGGGGCTaGTCAGACCAGCGACTCCCA +
Preference number: 4 (lower is better)
Translates to: PSQGIAGIHAMIFIYHIEANSRG*SDQRLP
Trigger: TGGGAGTCGCTGGTCTGATCAGCCCCTGGAATTTGC...TTCAATGTGGTAGATGAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265605.7
ENST00000367845.6
CDS-3UTR TCA 90 bp CTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCATCTACCACATTTGGCGTCCTCAAAGATaGTGGCAGGATTCTTGCCCC +
Preference number: 4 (lower is better)
Translates to: LPSQGIAGIHAMIFIYHIWRPQR*WQDSCP
Trigger: GGGGCAAGAATCCTGCCATCATCTTTGAGGACGCCA...AATGTGGTAGATGAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR TCA 90 bp CAAGGCATAGCTGGAATTCATGCCATGATTTTCATCTACCACATTGAACAACTGTGGCAAAGCTGGACCTaGCGGTTGCCGGAATGCACT +
Preference number: 4 (lower is better)
Translates to: QGIAGIHAMIFIYHIEQLWQSWT*RLPECT
Trigger: AGTGCATTCCGGCAACCGTCAGGTCCAGCTTTGCCA...CAGTTGTTCAATGTGGTAGATGAAAATCATGGCATGAATTCCAGCTATGCCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR TCA 90 bp TCTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCATCTACCACATACTCCTGAACTCAAGTaGTCCACCCACCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: SAKSRHSWNSCHDFHLPHTPELK*STHLGL
Trigger: GAGGCCAAGGTGGGTGGATCACTTGAGTTCAGGAGT...ATGTGGTAGATGAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265605.7
ENST00000367845.6
CDS-3UTR GCA 90 bp CCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCATCTACCACATTGAAAACTCCTCCAGGGACTaGTCCAGCAAATCCGCCACC +
Preference number: 4 (lower is better)
Translates to: PSQGIAGIHAMIFIYHIENSSRD*SSKSAT
Trigger: GGTGGCGGATTTGCTGGAGCAGTCCCTGGAGGAGTT...TTCAATGTGGTAGATGAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR GCA 90 bp CCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCATCTACCACATTGAAGCACCGTGTAGTGCATaGAGCCCAGGTGGTCCATCT +
Preference number: 4 (lower is better)
Translates to: PSQGIAGIHAMIFIYHIEAPCSA*SPGGPS
Trigger: AGATGGACCACCTGGGCTGCATGCACTACACGGTGC...TTCAATGTGGTAGATGAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR GCA 90 bp GCCATGCTAGTGGCTAATAGACAAGGAGATTATCTCCATAATCTCTCCAAAGATGCACCGTGTAGTGCATaGAGCCCAGGTGGTCCATCT +
Preference number: 4 (lower is better)
Translates to: AMLVANRQGDYLHNLSKDAPCSA*SPGGPS
Trigger: AGATGGACCACCTGGGCTGCATGCACTACACGGTGC...ATCTTTGGAGAGATTATGGAGATAATCTCCTTGTCTATTAGCCACTAGCATGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265605.7
ENST00000367845.6
CDS-3UTR GCA 90 bp CAAGTAGCTGGGGCTATAGGCAGAGGGCACCACACCAAGCTAATTTTTAAACTTTATCACAGTGTTCCCTaGAGCCATCGCTGGAGCTAT +
Preference number: 4 (lower is better)
Translates to: QVAGAIGRGHHTKLIFKLYHSVP*SHRWSY
Trigger: ATAGCTCCAGCGATGGCTGCAGGGAACACTGTGATA...AAGTTTAAAAATTAGCTTGGTGTGGTGCCCTCTGCCTATAGCCCCAGCTACTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265605.7
ENST00000367845.6
CDS-3UTR GCA 90 bp CCTCCTCTTCACTATCAAAGGGGACGACACACGTCACTGGACCAAATATCTCTTACCTGGTGGAACACCTaGTTTATCCAGGAGTTTGCA +
Preference number: 4 (lower is better)
Translates to: PPLHYQRGRHTSLDQISLTWWNT*FIQEFA
Trigger: TGCAAACTCCTGGATAAAGCAGGTGTTCCACCAGGT...AAGAGATATTTGGTCCAGTGACGTGTGTCGTCCCCTTTGATAGTGAAGAGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349305.8
CDS-3UTR GCA 90 bp CCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCATCTACCACATTGAAGCTGGACCTGACGGTTaGCGGAATGCACTCATCCAG +
Preference number: 4 (lower is better)
Translates to: PSQGIAGIHAMIFIYHIEAGPDG*RNALIQ
Trigger: CTGGATGAGTGCATTCCGGCAACCGTCAGGTCCAGC...TTCAATGTGGTAGATGAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR GCA 90 bp AAGTTACTAAGAACTGAGGATAAGCTAGAGATAACCTTCTGCCAAGTCAAGGCAGCTGGACCTGACGGTTaGCGGAATGCACTCATCCAG +
Preference number: 4 (lower is better)
Translates to: KLLRTEDKLEITFCQVKAAGPDG*RNALIQ
Trigger: CTGGATGAGTGCATTCCGGCAACCGTCAGGTCCAGC...TGCCTTGACTTGGCAGAAGGTTATCTCTAGCTTATCCTCAGTTCTTAGTAACTT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR GCA 90 bp TACTTAACGTTGTTGGCTCTTTCAATCACCTCCTCTTCACTATCAAAGGGGACGAAGCATAAAGTAGCCTaGCTGGTTCCTGGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: YLTLLALSITSSSLSKGTKHKVA*LVPGRE
Trigger: CTCCCTGCCAGGAACCAGGCAGGCTACTTTATGCTT...CGTCCCCTTTGATAGTGAAGAGGAGGTGATTGAAAGAGCCAACAACGTTAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349305.8
CDS-3UTR CCA 90 bp CCAATCAATGATCAATTAGCCATGCTAGTGGCTAATAGACAAGGAGATTATCTCTGCGGGATGACCAGCTaGGAAAGGCTTCTCTGGCGG +
Preference number: 4 (lower is better)
Translates to: PINDQLAMLVANRQGDYLCGMTS*ERLLWR
Trigger: CCGCCAGAGAAGCCTTTCCCAGCTGGTCATCCCGCA...GAGATAATCTCCTTGTCTATTAGCCACTAGCATGGCTAATTGATCATTGATTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265605.7
ENST00000367845.6
CDS-3UTR CCA 90 bp CCAATCAATGATCAATTAGCCATGCTAGTGGCTAATAGACAAGGAGATTATCTCAGCAAATCCGCCACCTaGTTCAGGACCCGTGAGCGC +
Preference number: 4 (lower is better)
Translates to: PINDQLAMLVANRQGDYLSKSAT*FRTRER
Trigger: GCGCTCACGGGTCCTGAACCAGGTGGCGGATTTGCT...GAGATAATCTCCTTGTCTATTAGCCACTAGCATGGCTAATTGATCATTGATTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265605.7
ENST00000367845.6
CDS-3UTR CCA 90 bp GTCATGCAGCAGGATTCATCCTTAATGTCTGTTATCACCGTGGGAAGCATAAAGACCGGGGAATGTCCATaGTTCTTGCCAGTGCTAAGG +
Preference number: 4 (lower is better)
Translates to: VMQQDSSLMSVITVGSIKTGECP*FLPVLR
Trigger: CCTTAGCACTGGCAAGAACCATGGACATTCCCCGGT...CTTTATGCTTCCCACGGTGATAACAGACATTAAGGATGAATCCTGCTGCATGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349305.8
CDS-3UTR CCA 90 bp GAGGAGCCTGACAACTGGCATCATTGTTCTATCTTCCTACTTATAAGTCTTTTTGTGCACTCTGACGTGTaGTGCAGGCTGGAGGAAGCG +
Preference number: 4 (lower is better)
Translates to: EEPDNWHHCSIFLLISLFVHSDV*CRLEEA
Trigger: CGCTTCCTCCAGCCTGCACCACACGTCAGAGTGCAC...AAAAAGACTTATAAGTAGGAAGATAGAACAATGATGCCAGTTGTCAGGCTCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
CDS-3UTR CCA 90 bp CCAATCAATGATCAATTAGCCATGCTAGTGGCTAATAGACAAGGAGATTATCTCGTGCACTCTGACGTGTaGTGCAGGCTGGAGGAAGCG +
Preference number: 4 (lower is better)
Translates to: PINDQLAMLVANRQGDYLVHSDV*CRLEEA
Trigger: CGCTTCCTCCAGCCTGCACCACACGTCAGAGTGCAC...GAGATAATCTCCTTGTCTATTAGCCACTAGCATGGCTAATTGATCATTGATTGG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265605.7
ENST00000367845.6
CDS-3UTR CCA 90 bp CCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCATCTACCACATTGAATGCATGCAGCCCAGGTaGTCCATCTGCGTGCACTCT +
Preference number: 4 (lower is better)
Translates to: PSQGIAGIHAMIFIYHIECMQPR*SICVHS
Trigger: AGAGTGCACGCAGATGGACCACCTGGGCTGCATGCA...TTCAATGTGGTAGATGAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR CCA 90 bp AAGTTACTAAGAACTGAGGATAAGCTAGAGATAACCTTCTGCCAAGTCAAGGCACCCTGCAGCCATCGCTaGAGCTATCTTCCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: KLLRTEDKLEITFCQVKAPCSHR*SYLPGQ
Trigger: CTGACCTGGAAGATAGCTCCAGCGATGGCTGCAGGG...TGCCTTGACTTGGCAGAAGGTTATCTCTAGCTTATCCTCAGTTCTTAGTAACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
CDS-3UTR CCA 90 bp TCCACATTGAAAATAGACAGTATCTCTTCACTAGTGGGTAAAGTTACTAAGAACTGGGGAGCGCTCAGCTaGGTGATCCGCTCAGCGGTG +
Preference number: 4 (lower is better)
Translates to: STLKIDSISSLVGKVTKNWGALS*VIRSAV
Trigger: CACCGCTGAGCGGATCACCCAGCTGAGCGCTCCCCA...GTTCTTAGTAACTTTACCCACTAGTGAAGAGATACTGTCTATTTTCAATGTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR CCA 90 bp AAGTTACTAAGAACTGAGGATAAGCTAGAGATAACCTTCTGCCAAGTCAAGGCAGAGAGCTTTTTGCAGTaGGGAGCGCTCAGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: KLLRTEDKLEITFCQVKAESFLQ*GALSWV
Trigger: CACCCAGCTGAGCGCTCCCCACTGCAAAAAGCTCTC...TGCCTTGACTTGGCAGAAGGTTATCTCTAGCTTATCCTCAGTTCTTAGTAACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR CCA 90 bp GGTCCAATCAATGATCAATTAGCCATGCTAGTGGCTAATAGACAAGGAGATTATTTCTTAGCCACCCGGTaGACGCGCCCCACATTGCTG +
Preference number: 4 (lower is better)
Translates to: GPINDQLAMLVANRQGDYFLATR*TRPTLL
Trigger: CAGCAATGTGGGGCGCGTCCACCGGGTGGCTAAGAA...ATAATCTCCTTGTCTATTAGCCACTAGCATGGCTAATTGATCATTGATTGGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265605.7
ENST00000367845.6
CDS-3UTR TCA 90 bp AGACAAGGAGATTATCTCCATAATCTCTCCAAAGATGGCAAATTATGGCTATTTCTTCTCTGGCGGCCTTaGCCGCGGCTTCGATCTCGT +
Preference number: 4 (lower is better)
Translates to: RQGDYLHNLSKDGKLWLFLLWRP*PRLRSR
Trigger: ACGAGATCGAAGCCGCGGTCAAGGCCGCCAGAGAAG...AAATAGCCATAATTTGCCATCTTTGGAGAGATTATGGAGATAATCTCCTTGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265605.7
ENST00000367845.6
CDS-3UTR TCA 90 bp GCCATGCTAGTGGCTAATAGACAAGGAGATTATCTCCATAATCTCTCCAAAGATCATCCACGCAGTCACTaGAGTCAGCTCACTGGGCTT +
Preference number: 4 (lower is better)
Translates to: AMLVANRQGDYLHNLSKDHPRSH*SQLTGL
Trigger: AAGCCCAGTGAGCTGACTTCAGTGACTGCGTGGATG...ATCTTTGGAGAGATTATGGAGATAATCTCCTTGTCTATTAGCCACTAGCATGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265605.7
ENST00000367845.6
CDS-3UTR TCA 90 bp CCTCCTCTTCACTATCAAAGGGGACGACACACGTCACTGGACCAAATATCTCTTTTCCAAACACAATATTaGCCACACCTGGTGGAACAC +
Preference number: 4 (lower is better)
Translates to: PPLHYQRGRHTSLDQISLFQTQY*PHLVEH
Trigger: GTGTTCCACCAGGTGTGGTCAATATTGTGTTTGGAA...AAGAGATATTTGGTCCAGTGACGTGTGTCGTCCCCTTTGATAGTGAAGAGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349305.8
CDS-3UTR TCA 90 bp CAAGGCATAGCTGGAATTCATGCCATGATTTTCATCTACCACATTGAACAACTGTGGCGTCCTCAAAGATaGTGGCAGGATTCTTGCCCC +
Preference number: 4 (lower is better)
Translates to: QGIAGIHAMIFIYHIEQLWRPQR*WQDSCP
Trigger: GGGGCAAGAATCCTGCCATCATCTTTGAGGACGCCA...CAGTTGTTCAATGTGGTAGATGAAAATCATGGCATGAATTCCAGCTATGCCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR TCA 90 bp CCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCATCTACCACATTGAATGGCGTCCTCAAAGATaGTGGCAGGATTCTTGCCCC +
Preference number: 4 (lower is better)
Translates to: PSQGIAGIHAMIFIYHIEWRPQR*WQDSCP
Trigger: GGGGCAAGAATCCTGCCATCATCTTTGAGGACGCCA...TTCAATGTGGTAGATGAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR TCA 90 bp AAGTTACTAAGAACTGAGGATAAGCTAGAGATAACCTTCTGCCAAGTCAAGGCATGGCGTCCTCAAAGATaGTGGCAGGATTCTTGCCCC +
Preference number: 4 (lower is better)
Translates to: KLLRTEDKLEITFCQVKAWRPQR*WQDSCP
Trigger: GGGGCAAGAATCCTGCCATCATCTTTGAGGACGCCA...TGCCTTGACTTGGCAGAAGGTTATCTCTAGCTTATCCTCAGTTCTTAGTAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR TCA 90 bp GCCATGCTAGTGGCTAATAGACAAGGAGATTATCTCCATAATCTCTCCAAAGATACTCCTGAACTCAAGTaGTCCACCCACCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: AMLVANRQGDYLHNLSKDTPELK*STHLGL
Trigger: GAGGCCAAGGTGGGTGGATCACTTGAGTTCAGGAGT...ATCTTTGGAGAGATTATGGAGATAATCTCCTTGTCTATTAGCCACTAGCATGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265605.7
ENST00000367845.6
CDS-3UTR GCA 90 bp CCAATCAATGATCAATTAGCCATGCTAGTGGCTAATAGACAAGGAGATTATCTCCAGACCAAGCCAGACTaGAGCTTCTTAGCCACCCGG +
Preference number: 4 (lower is better)
Translates to: PINDQLAMLVANRQGDYLQTKPD*SFLATR
Trigger: CCGGGTGGCTAAGAAGCTGCAGTCTGGCTTGGTCTG...GAGATAATCTCCTTGTCTATTAGCCACTAGCATGGCTAATTGATCATTGATTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265605.7
ENST00000367845.6
CDS-3UTR GCA 90 bp GCTAGAGATAACCTTCTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTCCCCCAGGCTGAAATaGAGTGGAATGATCATGGCT +
Preference number: 4 (lower is better)
Translates to: ARDNLLPSQGIAGIHAMISPRLK*SGMIMA
Trigger: AGCCATGATCATTCCACTGCATTTCAGCCTGGGGGA...AATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAGAAGGTTATCTCTAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265605.7
ENST00000367845.6
CDS-3UTR CCA 90 bp TACTTAACGTTGTTGGCTCTTTCAATCACCTCCTCTTCACTATCAAAGGGGACGGCTAAGGTTTTCCCTTaGTCTTTAGACTCGGCCTGG +
Preference number: 4 (lower is better)
Translates to: YLTLLALSITSSSLSKGTAKVFP*SLDSAW
Trigger: CCAGGCCGAGTCTAAAGACCAAGGGAAAACCTTAGC...CGTCCCCTTTGATAGTGAAGAGGAGGTGATTGAAAGAGCCAACAACGTTAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349305.8
CDS-3UTR CCA 90 bp TCTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCATCTACCACATACCGGGGAATGTCCATaGTTCTTGCCAGTGCTAAGG +
Preference number: 4 (lower is better)
Translates to: SAKSRHSWNSCHDFHLPHTGECP*FLPVLR
Trigger: CCTTAGCACTGGCAAGAACCATGGACATTCCCCGGT...ATGTGGTAGATGAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR CCA 90 bp AACCTTCTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCATCTACACCGGGGAATGTCCATaGTTCTTGCCAGTGCTAAGG +
Preference number: 4 (lower is better)
Translates to: NLLPSQGIAGIHAMIFIYTGECP*FLPVLR
Trigger: CCTTAGCACTGGCAAGAACCATGGACATTCCCCGGT...GTAGATGAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAGAAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR CCA 90 bp GGTCCAATCAATGATCAATTAGCCATGCTAGTGGCTAATAGACAAGGAGATTATCCCTGCAGCCATCGCTaGAGCTATCTTCCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: GPINDQLAMLVANRQGDYPCSHR*SYLPGQ
Trigger: CTGACCTGGAAGATAGCTCCAGCGATGGCTGCAGGG...ATAATCTCCTTGTCTATTAGCCACTAGCATGGCTAATTGATCATTGATTGGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265605.7
ENST00000367845.6
CDS-3UTR CCA 90 bp TCTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCATCTACCACATTCAGCTCACTGGGCTTaGCTATCACAGTGTTCCCTG +
Preference number: 4 (lower is better)
Translates to: SAKSRHSWNSCHDFHLPHSAHWA*LSQCSL
Trigger: CAGGGAACACTGTGATAGCCAAGCCCAGTGAGCTGA...ATGTGGTAGATGAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
CDS-3UTR CCA 90 bp TCCACATTGAAAATAGACAGTATCTCTTCACTAGTGGGTAAAGTTACTAAGAACGGGCCTCACCCACCCTaGGCCCGGTTCCAAACACAA +
Preference number: 4 (lower is better)
Translates to: STLKIDSISSLVGKVTKNGPHPP*ARFQTQ
Trigger: TTGTGTTTGGAACCGGGCCCAGGGTGGGTGAGGCCC...GTTCTTAGTAACTTTACCCACTAGTGAAGAGATACTGTCTATTTTCAATGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR CCA 90 bp GAGGAGCCTGACAACTGGCATCATTGTTCTATCTTCCTACTTATAAGTCTTTTTGAGAGCTTTTTGCAGTaGGGAGCGCTCAGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: EEPDNWHHCSIFLLISLFESFLQ*GALSWV
Trigger: CACCCAGCTGAGCGCTCCCCACTGCAAAAAGCTCTC...AAAAAGACTTATAAGTAGGAAGATAGAACAATGATGCCAGTTGTCAGGCTCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
CDS-3UTR CCA 90 bp AGAGATAACCTTCTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCACCTATGCTCACCAGTaGATCAGAGGGAATGCCGAC +
Preference number: 4 (lower is better)
Translates to: RDNLLPSQGIAGIHAMIFTYAHQ*IRGNAD
Trigger: GTCGGCATTCCCTCTGATCCACTGGTGAGCATAGGT...GAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAGAAGGTTATCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265605.7
ENST00000367847.2
CDS-3UTR CCA 90 bp CTCAGTGAAGAAGTCGTAAGAGTCCTTGGCTCCCTCTCTACCTATTCCAGAACTGAGGAGCCTGACAACTaGCATCATTGTTCTATCTTC +
Preference number: 4 (lower is better)
Translates to: LSEEVVRVLGSLSTYSRTEEPDN*HHCSIF
Trigger: GAAGATAGAACAATGATGCCAGTTGTCAGGCTCCTC...AGTTCTGGAATAGGTAGAGAGGGAGCCAAGGACTCTTACGACTTCTTCACTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349305.8
CDS-3UTR TCA 90 bp AGACAAGGAGATTATCTCCATAATCTCTCCAAAGATGGCAAATTATGGCTATTTCATCTGCGTGCACTCTaGCGTGTGGTGCAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: RQGDYLHNLSKDGKLWLFHLRAL*RVVQAG
Trigger: TCCAGCCTGCACCACACGTCAGAGTGCACGCAGATG...AAATAGCCATAATTTGCCATCTTTGGAGAGATTATGGAGATAATCTCCTTGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265605.7
ENST00000367845.6
CDS-3UTR TCA 90 bp CAAGTAGCTGGGGCTATAGGCAGAGGGCACCACACCAAGCTAATTTTTAAACTTTTCCAAACACAATATTaGCCACACCTGGTGGAACAC +
Preference number: 4 (lower is better)
Translates to: QVAGAIGRGHHTKLIFKLFQTQY*PHLVEH
Trigger: GTGTTCCACCAGGTGTGGTCAATATTGTGTTTGGAA...AAGTTTAAAAATTAGCTTGGTGTGGTGCCCTCTGCCTATAGCCCCAGCTACTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265605.7
ENST00000367845.6
CDS-3UTR TCA 90 bp AACCTTCTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCATCTACACCACATTGAACAACTaGTGCCTGCAGCCAGGCATT +
Preference number: 4 (lower is better)
Translates to: NLLPSQGIAGIHAMIFIYTTLNN*CLQPGI
Trigger: AATGCCTGGCTGCAGGCATCAGTTGTTCAATGTGGT...GTAGATGAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAGAAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR TCA 90 bp CTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCATCTACCACATTGCAAATTCCAGGGGCTaGTCAGACCAGCTATGTAAC +
Preference number: 4 (lower is better)
Translates to: LPSQGIAGIHAMIFIYHIANSRG*SDQLCN
Trigger: GTTACATAGCTGGTCTGATCAGCCCCTGGAATTTGC...AATGTGGTAGATGAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349305.8
CDS-3UTR TCA 90 bp CTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCATCTACCACATTTTTCCTCTTTACGACTaGGCACTCAGGTTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: LPSQGIAGIHAMIFIYHIFPLYD*ALRLSP
Trigger: TGGGGACAACCTGAGTGCTCAGTCGTAAAGAGGAAA...AATGTGGTAGATGAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367845.6
CDS-3UTR GCA 90 bp CCAAACACAATATTGACCACACCTGGTGGAACACCTGCTTTATCCAGGAGTTTGCACTATTTGGCACTCTaGAATACACTTCCCCTGTTG +
Preference number: 4 (lower is better)
Translates to: PNTILTTPGGTPALSRSLHYLAL*NTLPLL
Trigger: CAACAGGGGAAGTGTATTGCAGAGTGCCAAATAGTG...CAAACTCCTGGATAAAGCAGGTGTTCCACCAGGTGTGGTCAATATTGTGTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349305.8
CDS-3UTR GCA 90 bp CTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCATCTACCACATTAAGAACCTGAAGTTCTaGACAGACCGGGGAATGTCC +
Preference number: 4 (lower is better)
Translates to: LPSQGIAGIHAMIFIYHIKNLKF*TDRGMS
Trigger: GGACATTCCCCGGTCTGTGCAGAACTTCAGGTTCTT...AATGTGGTAGATGAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR GCA 90 bp AGACAAGGAGATTATCTCCATAATCTCTCCAAAGATGGCAAATTATGGCTATTTCCCAGGTGGTCCATCTaGGTGCACTCTGACGTGTGG +
Preference number: 4 (lower is better)
Translates to: RQGDYLHNLSKDGKLWLFPRWSI*VHSDVW
Trigger: CCACACGTCAGAGTGCACGCAGATGGACCACCTGGG...AAATAGCCATAATTTGCCATCTTTGGAGAGATTATGGAGATAATCTCCTTGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265605.7
ENST00000367845.6
CDS-3UTR GCA 90 bp TCCACATTGAAAATAGACAGTATCTCTTCACTAGTGGGTAAAGTTACTAAGAACCCCAGGTGGTCCATCTaGGTGCACTCTGACGTGTGG +
Preference number: 4 (lower is better)
Translates to: STLKIDSISSLVGKVTKNPRWSI*VHSDVW
Trigger: CCACACGTCAGAGTGCACGCAGATGGACCACCTGGG...GTTCTTAGTAACTTTACCCACTAGTGAAGAGATACTGTCTATTTTCAATGTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR GCA 90 bp AGAGATAACCTTCTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCTATCACAGTGTTCCCTaGAGCCATCGCTGGAGCTAT +
Preference number: 4 (lower is better)
Translates to: RDNLLPSQGIAGIHAMIFYHSVP*SHRWSY
Trigger: ATAGCTCCAGCGATGGCTGCAGGGAACACTGTGATA...GAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAGAAGGTTATCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
CDS-3UTR GCA 90 bp CTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCATCTACCACATTTATCACAGTGTTCCCTaGAGCCATCGCTGGAGCTAT +
Preference number: 4 (lower is better)
Translates to: LPSQGIAGIHAMIFIYHIYHSVP*SHRWSY
Trigger: ATAGCTCCAGCGATGGCTGCAGGGAACACTGTGATA...AATGTGGTAGATGAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
CDS-3UTR GCA 90 bp AACCTTCTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCATCTACGTGGATCAGAGGGAATaGCGACTTTCCACTTTCTGG +
Preference number: 4 (lower is better)
Translates to: NLLPSQGIAGIHAMIFIYVDQRE*RLSTFW
Trigger: CCAGAAAGTGGAAAGTCGGCATTCCCTCTGATCCAC...GTAGATGAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAGAAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265605.7
ENST00000367847.2
CDS-3UTR GCA 90 bp CCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCATCTACCACATTGAAAAGCATAAAGTAGCCTaGCTGGTTCCTGGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: PSQGIAGIHAMIFIYHIEKHKVA*LVPGRE
Trigger: CTCCCTGCCAGGAACCAGGCAGGCTACTTTATGCTT...TTCAATGTGGTAGATGAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR GCA 90 bp AGAGATAACCTTCTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCTCCCCCAGGCTGAAATaGAGTGGAATGATCATGGCT +
Preference number: 4 (lower is better)
Translates to: RDNLLPSQGIAGIHAMIFSPRLK*SGMIMA
Trigger: AGCCATGATCATTCCACTGCATTTCAGCCTGGGGGA...GAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAGAAGGTTATCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265605.7
ENST00000367845.6
CDS-3UTR CCA 90 bp TCTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCATCTACCACATGCTAAGGTTTTCCCTTaGTCTTTAGACTCGGCCTGG +
Preference number: 4 (lower is better)
Translates to: SAKSRHSWNSCHDFHLPHAKVFP*SLDSAW
Trigger: CCAGGCCGAGTCTAAAGACCAAGGGAAAACCTTAGC...ATGTGGTAGATGAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR CCA 90 bp GCCATGCTAGTGGCTAATAGACAAGGAGATTATCTCCATAATCTCTCCAAAGATACCGGGGAATGTCCATaGTTCTTGCCAGTGCTAAGG +
Preference number: 4 (lower is better)
Translates to: AMLVANRQGDYLHNLSKDTGECP*FLPVLR
Trigger: CCTTAGCACTGGCAAGAACCATGGACATTCCCCGGT...ATCTTTGGAGAGATTATGGAGATAATCTCCTTGTCTATTAGCCACTAGCATGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265605.7
ENST00000367845.6
CDS-3UTR CCA 90 bp CTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCATCTACCACATTGGTCAGCAAGTAGAGTaGCAAATTCCAGGGGCTGAT +
Preference number: 4 (lower is better)
Translates to: LPSQGIAGIHAMIFIYHIGQQVE*QIPGAD
Trigger: ATCAGCCCCTGGAATTTGCCACTCTACTTGCTGACC...AATGTGGTAGATGAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
CDS-3UTR CCA 90 bp AAGTTACTAAGAACTGAGGATAAGCTAGAGATAACCTTCTGCCAAGTCAAGGCATCAGCTCACTGGGCTTaGCTATCACAGTGTTCCCTG +
Preference number: 4 (lower is better)
Translates to: KLLRTEDKLEITFCQVKASAHWA*LSQCSL
Trigger: CAGGGAACACTGTGATAGCCAAGCCCAGTGAGCTGA...TGCCTTGACTTGGCAGAAGGTTATCTCTAGCTTATCCTCAGTTCTTAGTAACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
CDS-3UTR CCA 90 bp AGAGATAACCTTCTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCCTGAAGTCAGCTCACTaGGCTTGGCTATCACAGTGT +
Preference number: 4 (lower is better)
Translates to: RDNLLPSQGIAGIHAMIFLKSAH*AWLSQC
Trigger: ACACTGTGATAGCCAAGCCCAGTGAGCTGACTTCAG...GAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAGAAGGTTATCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
CDS-3UTR CCA 90 bp TCTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCATCTACCACATCTGAAGTCAGCTCACTaGGCTTGGCTATCACAGTGT +
Preference number: 4 (lower is better)
Translates to: SAKSRHSWNSCHDFHLPHLKSAH*AWLSQC
Trigger: ACACTGTGATAGCCAAGCCCAGTGAGCTGACTTCAG...ATGTGGTAGATGAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
CDS-3UTR CCA 90 bp TCCTCTTCACTATCAAAGGGGACGACACACGTCACTGGACCAAATATCTCTTCCAATATTGACCACACCTaGTGGAACACCTGCTTTATC +
Preference number: 4 (lower is better)
Translates to: SSSLSKGTTHVTGPNISSNIDHT*WNTCFI
Trigger: GATAAAGCAGGTGTTCCACCAGGTGTGGTCAATATT...GGAAGAGATATTTGGTCCAGTGACGTGTGTCGTCCCCTTTGATAGTGAAGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349305.8
CDS-3UTR CCA 90 bp GCTAGAGATAACCTTCTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTCAGGCTGAAATGCAGTaGAATGATCATGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: ARDNLLPSQGIAGIHAMIQAEMQ*NDHGSL
Trigger: CAGTGAGCCATGATCATTCCACTGCATTTCAGCCTG...AATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAGAAGGTTATCTCTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265605.7
ENST00000367845.6
CDS-3UTR TCA 90 bp TCCACATTGAAAATAGACAGTATCTCTTCACTAGTGGGTAAAGTTACTAAGAACTGGCAAAGCTGGACCTaGCGGTTGCCGGAATGCACT +
Preference number: 4 (lower is better)
Translates to: STLKIDSISSLVGKVTKNWQSWT*RLPECT
Trigger: AGTGCATTCCGGCAACCGTCAGGTCCAGCTTTGCCA...GTTCTTAGTAACTTTACCCACTAGTGAAGAGATACTGTCTATTTTCAATGTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR GCA 90 bp TCCACATTGAAAATAGACAGTATCTCTTCACTAGTGGGTAAAGTTACTAAGAACCACTCTGACGTGTGGTaGAGGCTGGAGGAAGCGAAG +
Preference number: 4 (lower is better)
Translates to: STLKIDSISSLVGKVTKNHSDVW*RLEEAK
Trigger: CTTCGCTTCCTCCAGCCTGCACCACACGTCAGAGTG...GTTCTTAGTAACTTTACCCACTAGTGAAGAGATACTGTCTATTTTCAATGTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR GCA 90 bp TCCACATTGAAAATAGACAGTATCTCTTCACTAGTGGGTAAAGTTACTAAGAACGCACCGTGTAGTGCATaGAGCCCAGGTGGTCCATCT +
Preference number: 4 (lower is better)
Translates to: STLKIDSISSLVGKVTKNAPCSA*SPGGPS
Trigger: AGATGGACCACCTGGGCTGCATGCACTACACGGTGC...GTTCTTAGTAACTTTACCCACTAGTGAAGAGATACTGTCTATTTTCAATGTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR GCA 90 bp GCTAGAGATAACCTTCTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTCTTTATCCAGGAGTTTaGACAACATCCACGCAGTCA +
Preference number: 4 (lower is better)
Translates to: ARDNLLPSQGIAGIHAMILYPGV*TTSTQS
Trigger: TGACTGCGTGGATGTTGTGCAAACTCCTGGATAAAG...AATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAGAAGGTTATCTCTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
CDS-3UTR GCA 90 bp TCTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCATCTACCACATACCTGGTGGAACACCTaGTTTATCCAGGAGTTTGCA +
Preference number: 4 (lower is better)
Translates to: SAKSRHSWNSCHDFHLPHTWWNT*FIQEFA
Trigger: TGCAAACTCCTGGATAAAGCAGGTGTTCCACCAGGT...ATGTGGTAGATGAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
CDS-3UTR GCA 90 bp TCCACATTGAAAATAGACAGTATCTCTTCACTAGTGGGTAAAGTTACTAAGAACCCAGGGAGAGCTTTTTaGAGTGGGGAGCGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: STLKIDSISSLVGKVTKNPGRAF*SGERSA
Trigger: AGCTGAGCGCTCCCCACTGCAAAAAGCTCTCCCTGG...GTTCTTAGTAACTTTACCCACTAGTGAAGAGATACTGTCTATTTTCAATGTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR GCA 90 bp AGACAAGGAGATTATCTCCATAATCTCTCCAAAGATGGCAAATTATGGCTATTTCCAGGGAGAGCTTTTTaGAGTGGGGAGCGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: RQGDYLHNLSKDGKLWLFPGRAF*SGERSA
Trigger: AGCTGAGCGCTCCCCACTGCAAAAAGCTCTCCCTGG...AAATAGCCATAATTTGCCATCTTTGGAGAGATTATGGAGATAATCTCCTTGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265605.7
ENST00000367845.6
CDS-3UTR GCA 90 bp TCTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCATCTACCACATTTATCAGAGCACCTATaGTCACCAGTGGATCAGAGG +
Preference number: 4 (lower is better)
Translates to: SAKSRHSWNSCHDFHLPHLSEHL*SPVDQR
Trigger: CCTCTGATCCACTGGTGAGCATAGGTGCTCTGATAA...ATGTGGTAGATGAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265605.7
ENST00000367847.2
CDS-3UTR CCA 90 bp CAAGGCATAGCTGGAATTCATGCCATGATTTTCATCTACCACATTGAACAACTGGCTAAGGTTTTCCCTTaGTCTTTAGACTCGGCCTGG +
Preference number: 4 (lower is better)
Translates to: QGIAGIHAMIFIYHIEQLAKVFP*SLDSAW
Trigger: CCAGGCCGAGTCTAAAGACCAAGGGAAAACCTTAGC...CAGTTGTTCAATGTGGTAGATGAAAATCATGGCATGAATTCCAGCTATGCCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR CCA 90 bp TCCACATTGAAAATAGACAGTATCTCTTCACTAGTGGGTAAAGTTACTAAGAACTGCATGCAGCCCAGGTaGTCCATCTGCGTGCACTCT +
Preference number: 4 (lower is better)
Translates to: STLKIDSISSLVGKVTKNCMQPR*SICVHS
Trigger: AGAGTGCACGCAGATGGACCACCTGGGCTGCATGCA...GTTCTTAGTAACTTTACCCACTAGTGAAGAGATACTGTCTATTTTCAATGTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR CCA 90 bp GCCATGCTAGTGGCTAATAGACAAGGAGATTATCTCCATAATCTCTCCAAAGATGGTCAGCAAGTAGAGTaGCAAATTCCAGGGGCTGAT +
Preference number: 4 (lower is better)
Translates to: AMLVANRQGDYLHNLSKDGQQVE*QIPGAD
Trigger: ATCAGCCCCTGGAATTTGCCACTCTACTTGCTGACC...ATCTTTGGAGAGATTATGGAGATAATCTCCTTGTCTATTAGCCACTAGCATGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265605.7
ENST00000367845.6
CDS-3UTR CCA 90 bp AGACAAGGAGATTATCTCCATAATCTCTCCAAAGATGGCAAATTATGGCTATTTCCCTGCAGCCATCGCTaGAGCTATCTTCCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: RQGDYLHNLSKDGKLWLFPCSHR*SYLPGQ
Trigger: CTGACCTGGAAGATAGCTCCAGCGATGGCTGCAGGG...AAATAGCCATAATTTGCCATCTTTGGAGAGATTATGGAGATAATCTCCTTGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265605.7
ENST00000367845.6
CDS-3UTR CCA 90 bp GAGGAGCCTGACAACTGGCATCATTGTTCTATCTTCCTACTTATAAGTCTTTTTTCAGCTCACTGGGCTTaGCTATCACAGTGTTCCCTG +
Preference number: 4 (lower is better)
Translates to: EEPDNWHHCSIFLLISLFSAHWA*LSQCSL
Trigger: CAGGGAACACTGTGATAGCCAAGCCCAGTGAGCTGA...AAAAAGACTTATAAGTAGGAAGATAGAACAATGATGCCAGTTGTCAGGCTCCTC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
CDS-3UTR CCA 90 bp CAAGGCATAGCTGGAATTCATGCCATGATTTTCATCTACCACATTGAACAACTGCTGAAGTCAGCTCACTaGGCTTGGCTATCACAGTGT +
Preference number: 4 (lower is better)
Translates to: QGIAGIHAMIFIYHIEQLLKSAH*AWLSQC
Trigger: ACACTGTGATAGCCAAGCCCAGTGAGCTGACTTCAG...CAGTTGTTCAATGTGGTAGATGAAAATCATGGCATGAATTCCAGCTATGCCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
CDS-3UTR CCA 90 bp AAGTTACTAAGAACTGAGGATAAGCTAGAGATAACCTTCTGCCAAGTCAAGGCAAGACAGATTTCACCCTaGTTGGCAAAGCTGGACCTG +
Preference number: 4 (lower is better)
Translates to: KLLRTEDKLEITFCQVKARQISP*LAKLDL
Trigger: CAGGTCCAGCTTTGCCAACCAGGGTGAAATCTGTCT...TGCCTTGACTTGGCAGAAGGTTATCTCTAGCTTATCCTCAGTTCTTAGTAACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265605.7
ENST00000367847.2
CDS-3UTR CCA 90 bp CCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCATCTACCACATTGAAAGACAGATTTCACCCTaGTTGGCAAAGCTGGACCTG +
Preference number: 4 (lower is better)
Translates to: PSQGIAGIHAMIFIYHIERQISP*LAKLDL
Trigger: CAGGTCCAGCTTTGCCAACCAGGGTGAAATCTGTCT...TTCAATGTGGTAGATGAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265605.7
ENST00000367847.2
CDS-3UTR CCA 90 bp AAGTTACTAAGAACTGAGGATAAGCTAGAGATAACCTTCTGCCAAGTCAAGGCATCACCGCACCAAATTTaGGCACCTTCAGCAAGAGCT +
Preference number: 4 (lower is better)
Translates to: KLLRTEDKLEITFCQVKASPHQI*APSARA
Trigger: AGCTCTTGCTGAAGGTGCCCAAATTTGGTGCGGTGA...TGCCTTGACTTGGCAGAAGGTTATCTCTAGCTTATCCTCAGTTCTTAGTAACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR CCA 90 bp CAAGGCATAGCTGGAATTCATGCCATGATTTTCATCTACCACATTGAACAACTGTCACCGCACCAAATTTaGGCACCTTCAGCAAGAGCT +
Preference number: 4 (lower is better)
Translates to: QGIAGIHAMIFIYHIEQLSPHQI*APSARA
Trigger: AGCTCTTGCTGAAGGTGCCCAAATTTGGTGCGGTGA...CAGTTGTTCAATGTGGTAGATGAAAATCATGGCATGAATTCCAGCTATGCCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR CCA 90 bp AGAGATAACCTTCTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCGACGACACACGTCACTaGACCAAATATCTCTTCCGT +
Preference number: 4 (lower is better)
Translates to: RDNLLPSQGIAGIHAMIFDDTRH*TKYLFR
Trigger: ACGGAAGAGATATTTGGTCCAGTGACGTGTGTCGTC...GAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAGAAGGTTATCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR CCA 90 bp CTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCATCTACCACATTAGTCGTAAGAGTCCTTaGCTCCCTCTCTACCTATTC +
Preference number: 4 (lower is better)
Translates to: LPSQGIAGIHAMIFIYHISRKSP*LPLYLF
Trigger: GAATAGGTAGAGAGGGAGCCAAGGACTCTTACGACT...AATGTGGTAGATGAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR CCA 90 bp TCCACATTGAAAATAGACAGTATCTCTTCACTAGTGGGTAAAGTTACTAAGAACATTGACCACACCTGGTaGAACACCGACTCCCACCGG +
Preference number: 4 (lower is better)
Translates to: STLKIDSISSLVGKVTKNIDHTW*NTDSHR
Trigger: CCGGTGGGAGTCGGTGTTCCACCAGGTGTGGTCAAT...GTTCTTAGTAACTTTACCCACTAGTGAAGAGATACTGTCTATTTTCAATGTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367847.2
CDS-3UTR TCA 90 bp TCCACATTGAAAATAGACAGTATCTCTTCACTAGTGGGTAAAGTTACTAAGAACCATCCACGCAGTCACTaGAGTCAGCTCACTGGGCTT +
Preference number: 4 (lower is better)
Translates to: STLKIDSISSLVGKVTKNHPRSH*SQLTGL
Trigger: AAGCCCAGTGAGCTGACTTCAGTGACTGCGTGGATG...GTTCTTAGTAACTTTACCCACTAGTGAAGAGATACTGTCTATTTTCAATGTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
CDS-3UTR TCA 90 bp TCTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCATCTACCACATTTCCAAACACAATATTaGCCACACCTGGTGGAACAC +
Preference number: 4 (lower is better)
Translates to: SAKSRHSWNSCHDFHLPHFQTQY*PHLVEH
Trigger: GTGTTCCACCAGGTGTGGTCAATATTGTGTTTGGAA...ATGTGGTAGATGAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR TCA 90 bp CAAGTAGCTGGGGCTATAGGCAGAGGGCACCACACCAAGCTAATTTTTAAACTTCTGGAATTCATGCCATaGTTTTCATCTACCACATTG +
Preference number: 4 (lower is better)
Translates to: QVAGAIGRGHHTKLIFKLLEFMP*FSSTTL
Trigger: CAATGTGGTAGATGAAAATCATGGCATGAATTCCAG...AAGTTTAAAAATTAGCTTGGTGTGGTGCCCTCTGCCTATAGCCCCAGCTACTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265605.7
ENST00000367845.6
CDS-3UTR TCA 90 bp CAAGTAGCTGGGGCTATAGGCAGAGGGCACCACACCAAGCTAATTTTTAAACTTACTAAGAAATGGAATTaGTTAGACTCGACCGTAGGA +
Preference number: 4 (lower is better)
Translates to: QVAGAIGRGHHTKLIFKLTKKWN*LDSTVG
Trigger: TCCTACGGTCGAGTCTAATCAATTCCATTTCTTAGT...AAGTTTAAAAATTAGCTTGGTGTGGTGCCCTCTGCCTATAGCCCCAGCTACTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265605.7
ENST00000367845.6
CDS-3UTR GCA 90 bp AGAGATAACCTTCTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCTTCCAGCATCAAAAGTaGGTTTGTTCCAGCCATAGC +
Preference number: 4 (lower is better)
Translates to: RDNLLPSQGIAGIHAMIFFQHQK*VCSSHS
Trigger: GCTATGGCTGGAACAAACGCACTTTTGATGCTGGAA...GAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAGAAGGTTATCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR GCA 90 bp GGTCCAATCAATGATCAATTAGCCATGCTAGTGGCTAATAGACAAGGAGATTATAAGAACCTGAAGTTCTaGACAGACCGGGGAATGTCC +
Preference number: 4 (lower is better)
Translates to: GPINDQLAMLVANRQGDYKNLKF*TDRGMS
Trigger: GGACATTCCCCGGTCTGTGCAGAACTTCAGGTTCTT...ATAATCTCCTTGTCTATTAGCCACTAGCATGGCTAATTGATCATTGATTGGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265605.7
ENST00000367845.6
CDS-3UTR GCA 90 bp GAGGAGCCTGACAACTGGCATCATTGTTCTATCTTCCTACTTATAAGTCTTTTTAAGAACCTGAAGTTCTaGACAGACCGGGGAATGTCC +
Preference number: 4 (lower is better)
Translates to: EEPDNWHHCSIFLLISLFKNLKF*TDRGMS
Trigger: GGACATTCCCCGGTCTGTGCAGAACTTCAGGTTCTT...AAAAAGACTTATAAGTAGGAAGATAGAACAATGATGCCAGTTGTCAGGCTCCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
CDS-3UTR GCA 90 bp AACCTTCTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCATCTACCTTTATCCAGGAGTTTaGACAACATCCACGCAGTCA +
Preference number: 4 (lower is better)
Translates to: NLLPSQGIAGIHAMIFIYLYPGV*TTSTQS
Trigger: TGACTGCGTGGATGTTGTGCAAACTCCTGGATAAAG...GTAGATGAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAGAAGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
CDS-3UTR GCA 90 bp CAAGGCATAGCTGGAATTCATGCCATGATTTTCATCTACCACATTGAACAACTGACCTGGTGGAACACCTaGTTTATCCAGGAGTTTGCA +
Preference number: 4 (lower is better)
Translates to: QGIAGIHAMIFIYHIEQLTWWNT*FIQEFA
Trigger: TGCAAACTCCTGGATAAAGCAGGTGTTCCACCAGGT...CAGTTGTTCAATGTGGTAGATGAAAATCATGGCATGAATTCCAGCTATGCCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
CDS-3UTR GCA 90 bp CCAATCAATGATCAATTAGCCATGCTAGTGGCTAATAGACAAGGAGATTATCTCGTGGATCAGAGGGAATaGCGACTTTCCACTTTCTGG +
Preference number: 4 (lower is better)
Translates to: PINDQLAMLVANRQGDYLVDQRE*RLSTFW
Trigger: CCAGAAAGTGGAAAGTCGGCATTCCCTCTGATCCAC...GAGATAATCTCCTTGTCTATTAGCCACTAGCATGGCTAATTGATCATTGATTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265605.7
CDS-3UTR GCA 90 bp CCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCATCTACCACATTGAATTATCAGAGCACCTATaGTCACCAGTGGATCAGAGG +
Preference number: 4 (lower is better)
Translates to: PSQGIAGIHAMIFIYHIELSEHL*SPVDQR
Trigger: CCTCTGATCCACTGGTGAGCATAGGTGCTCTGATAA...TTCAATGTGGTAGATGAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265605.7
ENST00000367847.2
CDS-3UTR CCA 90 bp CAAGTAGCTGGGGCTATAGGCAGAGGGCACCACACCAAGCTAATTTTTAAACTTGTCTTTTCCACTATTTaGCACTCTGCAATACACTTC +
Preference number: 4 (lower is better)
Translates to: QVAGAIGRGHHTKLIFKLVFSTI*HSAIHF
Trigger: GAAGTGTATTGCAGAGTGCCAAATAGTGGAAAAGAC...AAGTTTAAAAATTAGCTTGGTGTGGTGCCCTCTGCCTATAGCCCCAGCTACTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265605.7
ENST00000367845.6
CDS-3UTR CCA 90 bp CTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCATCTACCACATTGGACAAAGATCCTGCTaGTACAGAGACAGATTTCAC +
Preference number: 4 (lower is better)
Translates to: LPSQGIAGIHAMIFIYHIGQRSC*YRDRFH
Trigger: GTGAAATCTGTCTCTGTACCAGCAGGATCTTTGTCC...AATGTGGTAGATGAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265605.7
ENST00000367847.2
CDS-3UTR CCA 90 bp GCCATGCTAGTGGCTAATAGACAAGGAGATTATCTCCATAATCTCTCCAAAGATAGTCGTAAGAGTCCTTaGCTCCCTCTCTACCTATTC +
Preference number: 4 (lower is better)
Translates to: AMLVANRQGDYLHNLSKDSRKSP*LPLYLF
Trigger: GAATAGGTAGAGAGGGAGCCAAGGACTCTTACGACT...ATCTTTGGAGAGATTATGGAGATAATCTCCTTGTCTATTAGCCACTAGCATGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265605.7
ENST00000367845.6
CDS-3UTR CCA 90 bp AAGTTACTAAGAACTGAGGATAAGCTAGAGATAACCTTCTGCCAAGTCAAGGCAAGTCGTAAGAGTCCTTaGCTCCCTCTCTACCTATTC +
Preference number: 4 (lower is better)
Translates to: KLLRTEDKLEITFCQVKASRKSP*LPLYLF
Trigger: GAATAGGTAGAGAGGGAGCCAAGGACTCTTACGACT...TGCCTTGACTTGGCAGAAGGTTATCTCTAGCTTATCCTCAGTTCTTAGTAACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR CCA 90 bp CCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCATCTACCACATTGAACAGGCTGAAATGCAGTaGAATGATCATGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: PSQGIAGIHAMIFIYHIEQAEMQ*NDHGSL
Trigger: CAGTGAGCCATGATCATTCCACTGCATTTCAGCCTG...TTCAATGTGGTAGATGAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265605.7
ENST00000367845.6
CDS-3UTR TCA 90 bp GCTAGAGATAACCTTCTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTCTGGAATTCATGCCATaGTTTTCATCTACCACATTG +
Preference number: 4 (lower is better)
Translates to: ARDNLLPSQGIAGIHAMILEFMP*FSSTTL
Trigger: CAATGTGGTAGATGAAAATCATGGCATGAATTCCAG...AATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAGAAGGTTATCTCTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR GCA 90 bp CCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCATCTACCACATTGAACACTATTTGGCACTCTaGAATACACTTCCCCTGTTG +
Preference number: 4 (lower is better)
Translates to: PSQGIAGIHAMIFIYHIEHYLAL*NTLPLL
Trigger: CAACAGGGGAAGTGTATTGCAGAGTGCCAAATAGTG...TTCAATGTGGTAGATGAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR GCA 90 bp AGAGATAACCTTCTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCTCTGGACAAAGATCCTaGTGGTACAGAGACAGATTT +
Preference number: 4 (lower is better)
Translates to: RDNLLPSQGIAGIHAMIFSGQRS*WYRDRF
Trigger: AAATCTGTCTCTGTACCAGCAGGATCTTTGTCCAGA...GAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAGAAGGTTATCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265605.7
ENST00000367847.2
CDS-3UTR GCA 90 bp TCCACATTGAAAATAGACAGTATCTCTTCACTAGTGGGTAAAGTTACTAAGAACAAGCATAAAGTAGCCTaGCTGGTTCCTGGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: STLKIDSISSLVGKVTKNKHKVA*LVPGRE
Trigger: CTCCCTGCCAGGAACCAGGCAGGCTACTTTATGCTT...GTTCTTAGTAACTTTACCCACTAGTGAAGAGATACTGTCTATTTTCAATGTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR CCA 90 bp GGTCCAATCAATGATCAATTAGCCATGCTAGTGGCTAATAGACAAGGAGATTATGACGACACACGTCACTaGACCAAATATCTCTTCCGT +
Preference number: 4 (lower is better)
Translates to: GPINDQLAMLVANRQGDYDDTRH*TKYLFR
Trigger: ACGGAAGAGATATTTGGTCCAGTGACGTGTGTCGTC...ATAATCTCCTTGTCTATTAGCCACTAGCATGGCTAATTGATCATTGATTGGACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265605.7
ENST00000367845.6
CDS-3UTR CCA 90 bp CCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCATCTACCACATTGAAGAGGAGCCTGACAACTaGCATCATTGTTCTATCTTC +
Preference number: 4 (lower is better)
Translates to: PSQGIAGIHAMIFIYHIEEEPDN*HHCSIF
Trigger: GAAGATAGAACAATGATGCCAGTTGTCAGGCTCCTC...TTCAATGTGGTAGATGAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
CDS-3UTR TCA 90 bp GAGGAGCCTGACAACTGGCATCATTGTTCTATCTTCCTACTTATAAGTCTTTTTTTCCAAACACAATATTaGCCACACCTGGTGGAACAC +
Preference number: 4 (lower is better)
Translates to: EEPDNWHHCSIFLLISLFFQTQY*PHLVEH
Trigger: GTGTTCCACCAGGTGTGGTCAATATTGTGTTTGGAA...AAAAAGACTTATAAGTAGGAAGATAGAACAATGATGCCAGTTGTCAGGCTCCTC
41% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
CDS-3UTR TCA 90 bp GCTAGAGATAACCTTCTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTATGAAAGAAACACTATaGAAACATAACCTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: ARDNLLPSQGIAGIHAMIMKETL*KHNLGG
Trigger: TCCTCCCAGGTTATGTTTTCATAGTGTTTCTTTCAT...AATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAGAAGGTTATCTCTAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265605.7
ENST00000367845.6
CDS-3UTR GCA 90 bp GGTCCAATCAATGATCAATTAGCCATGCTAGTGGCTAATAGACAAGGAGATTATTTCCAGCATCAAAAGTaGGTTTGTTCCAGCCATAGC +
Preference number: 4 (lower is better)
Translates to: GPINDQLAMLVANRQGDYFQHQK*VCSSHS
Trigger: GCTATGGCTGGAACAAACGCACTTTTGATGCTGGAA...ATAATCTCCTTGTCTATTAGCCACTAGCATGGCTAATTGATCATTGATTGGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265605.7
ENST00000367845.6
CDS-3UTR GCA 90 bp GGTCCAATCAATGATCAATTAGCCATGCTAGTGGCTAATAGACAAGGAGATTATCTTTATCCAGGAGTTTaGACAACATCCACGCAGTCA +
Preference number: 4 (lower is better)
Translates to: GPINDQLAMLVANRQGDYLYPGV*TTSTQS
Trigger: TGACTGCGTGGATGTTGTGCAAACTCCTGGATAAAG...ATAATCTCCTTGTCTATTAGCCACTAGCATGGCTAATTGATCATTGATTGGACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265605.7
ENST00000367845.6
CDS-3UTR GCA 90 bp AAGTTACTAAGAACTGAGGATAAGCTAGAGATAACCTTCTGCCAAGTCAAGGCATCTGGACAAAGATCCTaGTGGTACAGAGACAGATTT +
Preference number: 4 (lower is better)
Translates to: KLLRTEDKLEITFCQVKASGQRS*WYRDRF
Trigger: AAATCTGTCTCTGTACCAGCAGGATCTTTGTCCAGA...TGCCTTGACTTGGCAGAAGGTTATCTCTAGCTTATCCTCAGTTCTTAGTAACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265605.7
ENST00000367847.2
CDS-3UTR GCA 90 bp GCTAGAGATAACCTTCTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTCATAGCTGGAATTCATaGCATGATTTTCATCTACCA +
Preference number: 4 (lower is better)
Translates to: ARDNLLPSQGIAGIHAMIHSWNS*HDFHLP
Trigger: TGGTAGATGAAAATCATGGCATGAATTCCAGCTATG...AATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAGAAGGTTATCTCTAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR CCA 90 bp TCCACATTGAAAATAGACAGTATCTCTTCACTAGTGGGTAAAGTTACTAAGAACGCTAAGGTTTTCCCTTaGTCTTTAGACTCGGCCTGG +
Preference number: 4 (lower is better)
Translates to: STLKIDSISSLVGKVTKNAKVFP*SLDSAW
Trigger: CCAGGCCGAGTCTAAAGACCAAGGGAAAACCTTAGC...GTTCTTAGTAACTTTACCCACTAGTGAAGAGATACTGTCTATTTTCAATGTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR CCA 90 bp CCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCATCTACCACATTGAAAATATTGACCACACCTaGTGGAACACCTGCTTTATC +
Preference number: 4 (lower is better)
Translates to: PSQGIAGIHAMIFIYHIENIDHT*WNTCFI
Trigger: GATAAAGCAGGTGTTCCACCAGGTGTGGTCAATATT...TTCAATGTGGTAGATGAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
CDS-3UTR CCA 90 bp CCAATCAATGATCAATTAGCCATGCTAGTGGCTAATAGACAAGGAGATTATCTCGGACAAAGATCCTGCTaGTACAGAGACAGATTTCAC +
Preference number: 4 (lower is better)
Translates to: PINDQLAMLVANRQGDYLGQRSC*YRDRFH
Trigger: GTGAAATCTGTCTCTGTACCAGCAGGATCTTTGTCC...GAGATAATCTCCTTGTCTATTAGCCACTAGCATGGCTAATTGATCATTGATTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265605.7
CDS-3UTR CCA 90 bp AGACAAGGAGATTATCTCCATAATCTCTCCAAAGATGGCAAATTATGGCTATTTTCACCGCACCAAATTTaGGCACCTTCAGCAAGAGCT +
Preference number: 4 (lower is better)
Translates to: RQGDYLHNLSKDGKLWLFSPHQI*APSARA
Trigger: AGCTCTTGCTGAAGGTGCCCAAATTTGGTGCGGTGA...AAATAGCCATAATTTGCCATCTTTGGAGAGATTATGGAGATAATCTCCTTGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265605.7
ENST00000367845.6
CDS-3UTR CCA 90 bp TCCACATTGAAAATAGACAGTATCTCTTCACTAGTGGGTAAAGTTACTAAGAACAATATTGACCACACCTaGTGGAACACCGACTCCCAC +
Preference number: 4 (lower is better)
Translates to: STLKIDSISSLVGKVTKNNIDHT*WNTDSH
Trigger: GTGGGAGTCGGTGTTCCACCAGGTGTGGTCAATATT...GTTCTTAGTAACTTTACCCACTAGTGAAGAGATACTGTCTATTTTCAATGTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367847.2
CDS-3UTR TCA 90 bp CAAGGCATAGCTGGAATTCATGCCATGATTTTCATCTACCACATTGAACAACTGATGAGGTCCAATCAATaGTCAATTAGCCATGCTAGT +
Preference number: 4 (lower is better)
Translates to: QGIAGIHAMIFIYHIEQLMRSNQ*SISHAS
Trigger: ACTAGCATGGCTAATTGATCATTGATTGGACCTCAT...CAGTTGTTCAATGTGGTAGATGAAAATCATGGCATGAATTCCAGCTATGCCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265605.7
ENST00000367845.6
CDS-3UTR CCA 90 bp CAAGGCATAGCTGGAATTCATGCCATGATTTTCATCTACCACATTGAACAACTGGTCTTTTCCACTATTTaGCACTCTGCAATACACTTC +
Preference number: 4 (lower is better)
Translates to: QGIAGIHAMIFIYHIEQLVFSTI*HSAIHF
Trigger: GAAGTGTATTGCAGAGTGCCAAATAGTGGAAAAGAC...CAGTTGTTCAATGTGGTAGATGAAAATCATGGCATGAATTCCAGCTATGCCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR CCA 90 bp GGTCCAATCAATGATCAATTAGCCATGCTAGTGGCTAATAGACAAGGAGATTATAATATTGACCACACCTaGTGGAACACCTGCTTTATC +
Preference number: 4 (lower is better)
Translates to: GPINDQLAMLVANRQGDYNIDHT*WNTCFI
Trigger: GATAAAGCAGGTGTTCCACCAGGTGTGGTCAATATT...ATAATCTCCTTGTCTATTAGCCACTAGCATGGCTAATTGATCATTGATTGGACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265605.7
ENST00000367845.6
CDS-3UTR CCA 90 bp TCCACATTGAAAATAGACAGTATCTCTTCACTAGTGGGTAAAGTTACTAAGAACGACGACACACGTCACTaGACCAAATATCTCTTCCGT +
Preference number: 4 (lower is better)
Translates to: STLKIDSISSLVGKVTKNDDTRH*TKYLFR
Trigger: ACGGAAGAGATATTTGGTCCAGTGACGTGTGTCGTC...GTTCTTAGTAACTTTACCCACTAGTGAAGAGATACTGTCTATTTTCAATGTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR TCA 90 bp CAAGGCATAGCTGGAATTCATGCCATGATTTTCATCTACCACATTGAACAACTGATGAAAGAAACACTATaGAAACATAACCTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: QGIAGIHAMIFIYHIEQLMKETL*KHNLGG
Trigger: TCCTCCCAGGTTATGTTTTCATAGTGTTTCTTTCAT...CAGTTGTTCAATGTGGTAGATGAAAATCATGGCATGAATTCCAGCTATGCCTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265605.7
ENST00000367845.6
CDS-3UTR GCA 90 bp TCCACATTGAAAATAGACAGTATCTCTTCACTAGTGGGTAAAGTTACTAAGAACTTCCAGCATCAAAAGTaGGTTTGTTCCAGCCATAGC +
Preference number: 4 (lower is better)
Translates to: STLKIDSISSLVGKVTKNFQHQK*VCSSHS
Trigger: GCTATGGCTGGAACAAACGCACTTTTGATGCTGGAA...GTTCTTAGTAACTTTACCCACTAGTGAAGAGATACTGTCTATTTTCAATGTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR GCA 90 bp AACCTTCTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCATCTACAAAATTCACTATAGATaGTCTTCTGGACAAAGATCC +
Preference number: 4 (lower is better)
Translates to: NLLPSQGIAGIHAMIFIYKIHYR*SSGQRS
Trigger: GGATCTTTGTCCAGAAGAGCATCTATAGTGAATTTT...GTAGATGAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAGAAGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265605.7
ENST00000367847.2
CDS-3UTR GCA 90 bp AAGTTACTAAGAACTGAGGATAAGCTAGAGATAACCTTCTGCCAAGTCAAGGCACATAGCTGGAATTCATaGCATGATTTTCATCTACCA +
Preference number: 4 (lower is better)
Translates to: KLLRTEDKLEITFCQVKAHSWNS*HDFHLP
Trigger: TGGTAGATGAAAATCATGGCATGAATTCCAGCTATG...TGCCTTGACTTGGCAGAAGGTTATCTCTAGCTTATCCTCAGTTCTTAGTAACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR CCA 90 bp GAGGAGCCTGACAACTGGCATCATTGTTCTATCTTCCTACTTATAAGTCTTTTTGTCTTTTCCACTATTTaGCACTCTGCAATACACTTC +
Preference number: 4 (lower is better)
Translates to: EEPDNWHHCSIFLLISLFVFSTI*HSAIHF
Trigger: GAAGTGTATTGCAGAGTGCCAAATAGTGGAAAAGAC...AAAAAGACTTATAAGTAGGAAGATAGAACAATGATGCCAGTTGTCAGGCTCCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
CDS-3UTR CCA 90 bp CCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCATCTACCACATTGAAAAGTCAAGGCATAGCTaGAATTCATGCCATGATTTT +
Preference number: 4 (lower is better)
Translates to: PSQGIAGIHAMIFIYHIEKSRHS*NSCHDF
Trigger: AAAATCATGGCATGAATTCCAGCTATGCCTTGACTT...TTCAATGTGGTAGATGAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR CCA 90 bp TCCACATTGAAAATAGACAGTATCTCTTCACTAGTGGGTAAAGTTACTAAGAACGAGGAGCCTGACAACTaGCATCATTGTTCTATCTTC +
Preference number: 4 (lower is better)
Translates to: STLKIDSISSLVGKVTKNEEPDN*HHCSIF
Trigger: GAAGATAGAACAATGATGCCAGTTGTCAGGCTCCTC...GTTCTTAGTAACTTTACCCACTAGTGAAGAGATACTGTCTATTTTCAATGTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
CDS-3UTR GCA 90 bp GAGGAGCCTGACAACTGGCATCATTGTTCTATCTTCCTACTTATAAGTCTTTTTCATAGCTGGAATTCATaGCATGATTTTCATCTACCA +
Preference number: 4 (lower is better)
Translates to: EEPDNWHHCSIFLLISLFHSWNS*HDFHLP
Trigger: TGGTAGATGAAAATCATGGCATGAATTCCAGCTATG...AAAAAGACTTATAAGTAGGAAGATAGAACAATGATGCCAGTTGTCAGGCTCCTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
CDS-3UTR CCA 90 bp GGTCCAATCAATGATCAATTAGCCATGCTAGTGGCTAATAGACAAGGAGATTATAAGTCAAGGCATAGCTaGAATTCATGCCATGATTTT +
Preference number: 4 (lower is better)
Translates to: GPINDQLAMLVANRQGDYKSRHS*NSCHDF
Trigger: AAAATCATGGCATGAATTCCAGCTATGCCTTGACTT...ATAATCTCCTTGTCTATTAGCCACTAGCATGGCTAATTGATCATTGATTGGACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265605.7
ENST00000367845.6
CDS-3UTR TCA 90 bp AGACAAGGAGATTATCTCCATAATCTCTCCAAAGATGGCAAATTATGGCTATTTATGAGGTCCAATCAATaGTCAATTAGCCATGCTAGT +
Preference number: 4 (lower is better)
Translates to: RQGDYLHNLSKDGKLWLFMRSNQ*SISHAS
Trigger: ACTAGCATGGCTAATTGATCATTGATTGGACCTCAT...AAATAGCCATAATTTGCCATCTTTGGAGAGATTATGGAGATAATCTCCTTGTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265605.7
ENST00000367845.6
CDS-3UTR TCA 90 bp AGACAAGGAGATTATCTCCATAATCTCTCCAAAGATGGCAAATTATGGCTATTTACTAAGAAATGGAATTaGTTAGACTCGACCGTAGGA +
Preference number: 4 (lower is better)
Translates to: RQGDYLHNLSKDGKLWLFTKKWN*LDSTVG
Trigger: TCCTACGGTCGAGTCTAATCAATTCCATTTCTTAGT...AAATAGCCATAATTTGCCATCTTTGGAGAGATTATGGAGATAATCTCCTTGTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265605.7
ENST00000367845.6
CDS-3UTR CCA 90 bp TCCACATTGAAAATAGACAGTATCTCTTCACTAGTGGGTAAAGTTACTAAGAACGTCTTTTCCACTATTTaGCACTCTGCAATACACTTC +
Preference number: 4 (lower is better)
Translates to: STLKIDSISSLVGKVTKNVFSTI*HSAIHF
Trigger: GAAGTGTATTGCAGAGTGCCAAATAGTGGAAAAGAC...GTTCTTAGTAACTTTACCCACTAGTGAAGAGATACTGTCTATTTTCAATGTGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR GCA 90 bp TCCACATTGAAAATAGACAGTATCTCTTCACTAGTGGGTAAAGTTACTAAGAACAAAATTCACTATAGATaGTCTTCTGGACAAAGATCC +
Preference number: 4 (lower is better)
Translates to: STLKIDSISSLVGKVTKNKIHYR*SSGQRS
Trigger: GGATCTTTGTCCAGAAGAGCATCTATAGTGAATTTT...GTTCTTAGTAACTTTACCCACTAGTGAAGAGATACTGTCTATTTTCAATGTGGA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265605.7
ENST00000367847.2
CDS-3UTR CAA 90 bp GCCACCCGGTGGACGCGCCCCACATTGCTGGACCACACGGTAGCCGCCAGCCCAGCCTGCAGCCAGGCATaGGCCATAGTGGCTCCACCA +
Preference number: 5 (lower is better)
Translates to: ATRWTRPTLLDHTVAASPACSQA*AIVAPP
Trigger: TGGTGGAGCCACTATGGCCAATGCCTGGCTGCAGGC...TGGGCTGGCGGCTACCGTGTGGTCCAGCAATGTGGGGCGCGTCCACCGGGTGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349305.8
CDS CCA 90 bp TGCTCCAGCAAATCCGCCACCTGGTTCAGGACCCGTGAGCGCTCCTaGGGGCTGCGGGATGACCAGCTGGGAAAGGCTTCTCTGGCGGCC +
Preference number: 5 (lower is better)
Translates to: CSSKSATWFRTRERS*GLRDDQLGKASLAA
Trigger: GGCCGCCAGAGAAGCCTTTCCCAGCTGGTCATCCCGCAGCCCCCAGGAGCGCTCACGGGTCCTGAACCAGGTGGCGGATTTGCTGGAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
ENST00000534012.1
CDS GCA 90 bp CTGGTGGAACACCGACTCCCACCGGGGCCCGCACCGTGTAGTGCATaGAGCCCAGGTGGTCCATCTGCGTGCACTCTGACGTGTGGTGCA +
Preference number: 5 (lower is better)
Translates to: LVEHRLPPGPAPCSA*SPGGPSACTLTCGA
Trigger: TGCACCACACGTCAGAGTGCACGCAGATGGACCACCTGGGCTGCATGCACTACACGGTGCGGGCCCCGGTGGGAGTCGGTGTTCCACCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367847.2
CDS GCA 90 bp TGTACCCTGGAACGACTCCCACCGGGGCCCGCACCGTGTAGTGCATaGAGCCCAGGTGGTCCATCTGCGTGCACTCTGACGTGTGGTGCA +
Preference number: 5 (lower is better)
Translates to: CTLERLPPGPAPCSA*SPGGPSACTLTCGA
Trigger: TGCACCACACGTCAGAGTGCACGCAGATGGACCACCTGGGCTGCATGCACTACACGGTGCGGGCCCCGGTGGGAGTCGTTCCAGGGTACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349305.8
CDS-3UTR CAA 90 bp CAGCTGGGTGATCCGCTCAGCGGTGGGCTGGCTCCCGGTGAAGGAGATCAGGGGGTCAGCTCACTGGGCTaGGCTATCACAGTGTTCCCT +
Preference number: 5 (lower is better)
Translates to: QLGDPLSGGLAPGEGDQGVSSLG*AITVFP
Trigger: AGGGAACACTGTGATAGCCAAGCCCAGTGAGCTGAC...CCCCTGATCTCCTTCACCGGGAGCCAGCCCACCGCTGAGCGGATCACCCAGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000349305.8
CDS-3UTR CAA 90 bp TGGGGAGCGCTCAGCTGGGTGATCCGCTCAGCGGTGGGCTGGCTCCCGGTGAAGGCTTTATCCAGGAGTTaGCACAACATCCACGCAGTC +
Preference number: 5 (lower is better)
Translates to: WGALSWVIRSAVGWLPVKALSRS*HNIHAV
Trigger: GACTGCGTGGATGTTGTGCAAACTCCTGGATAAAGC...CTTCACCGGGAGCCAGCCCACCGCTGAGCGGATCACCCAGCTGAGCGCTCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349305.8
CDS TCA 90 bp GGGGGCTGCGGGATGACCAGCTGGGAAAGGCTTCTCTGGCGGCCTTaGCCGCGGCTTCGATCTTTGAGGAGCAAATGGGAGAAAGGGTCA +
Preference number: 5 (lower is better)
Translates to: GGCGMTSWERLLWRP*PRLRSLRSKWEKGS
Trigger: TGACCCTTTCTCCCATTTGCTCCTCAAAGATCGAAGCCGCGGTCAAGGCCGCCAGAGAAGCCTTTCCCAGCTGGTCATCCCGCAGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534012.1
CDS GCA 90 bp TTCCCTTGGTCTTTAGACTCGGCCTGGGCAAACTCCTCCAGGGACTaGTCCAGCAAATCCGCCACCTGGTTCAGGACCCGTGAGCGCTCC +
Preference number: 5 (lower is better)
Translates to: FPWSLDSAWANSSRD*SSKSATWFRTRERS
Trigger: GGAGCGCTCACGGGTCCTGAACCAGGTGGCGGATTTGCTGGAGCAGTCCCTGGAGGAGTTTGCCCAGGCCGAGTCTAAAGACCAAGGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
ENST00000534012.1
CDS CCA 90 bp CCCTGCAGCCATCGCTGGAGCTATCTTCCAGGTCAGCAAGTAGAGTaGCAAATTCCAGGGGCTGATCAGACCAGCGACTCCCACCGGGGC +
Preference number: 5 (lower is better)
Translates to: PCSHRWSYLPGQQVE*QIPGADQTSDSHRG
Trigger: GCCCCGGTGGGAGTCGCTGGTCTGATCAGCCCCTGGAATTTGCCACTCTACTTGCTGACCTGGAAGATAGCTCCAGCGATGGCTGCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265605.7
ENST00000367845.6
CDS GCA 90 bp TGCATGCAGCCCAGGTGGTCCATCTGCGTGCACTCTGACGTGTGGTaGAGGCTGGAGGAAGCGAAGAACCTGAAGTTCTGCACAGACCGG +
Preference number: 5 (lower is better)
Translates to: CMQPRWSICVHSDVW*RLEEAKNLKFCTDR
Trigger: CCGGTCTGTGCAGAACTTCAGGTTCTTCGCTTCCTCCAGCCTGCACCACACGTCAGAGTGCACGCAGATGGACCACCTGGGCTGCATGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR CAA 90 bp CACCAGGGCCTCACCCACCCTGGGCCCGGTTCCAAACACAATATTGACCACACCCTGATGAGCCAGCAGTaGGTCCAGACCAAGCCAGAC +
Preference number: 5 (lower is better)
Translates to: HQGLTHPGPGSKHNIDHTLMSQQ*VQTKPD
Trigger: GTCTGGCTTGGTCTGGACCAACTGCTGGCTCATCAG...GGTGTGGTCAATATTGTGTTTGGAACCGGGCCCAGGGTGGGTGAGGCCCTGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349305.8
CDS TCA 90 bp CACCGTGTAGTGCATGCAGCCCAGGTGGTCCATCTGCGTGCACTCTaGCGTGTGGTGCAGGCTGGAGGAAGCGAAGAACCTGAAGTTCTG +
Preference number: 5 (lower is better)
Translates to: HRVVHAAQVVHLRAL*RVVQAGGSEEPEVL
Trigger: CAGAACTTCAGGTTCTTCGCTTCCTCCAGCCTGCACCACACGTCAGAGTGCACGCAGATGGACCACCTGGGCTGCATGCACTACACGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR CAA 90 bp GCTCCCGGTGAAGGAGATCAGGGGCACCTCTGGGTGGGACACCAGGGCCTCACCCCATACTTAACGTTGTaGGCTCTTTCAATCACCTCC +
Preference number: 5 (lower is better)
Translates to: APGEGDQGHLWVGHQGLTPYLTL*ALSITS
Trigger: GGAGGTGATTGAAAGAGCCAACAACGTTAAGTATGG...GGTGAGGCCCTGGTGTCCCACCCAGAGGTGCCCCTGATCTCCTTCACCGGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349305.8
CDS-3UTR CAA 90 bp TGGGGAGCGCTCAGCTGGGTGATCCGCTCAGCGGTGGGCTGGCTCCCGGTGAAGTTAACGGTGATGGTTTaGATCTCAGTGAAGAAGTCG +
Preference number: 5 (lower is better)
Translates to: WGALSWVIRSAVGWLPVKLTVMV*ISVKKS
Trigger: CGACTTCTTCACTGAGATCAAAACCATCACCGTTAA...CTTCACCGGGAGCCAGCCCACCGCTGAGCGGATCACCCAGCTGAGCGCTCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349305.8
CDS TCA 90 bp GCGTGCACTCTGACGTGTGGTGCAGGCTGGAGGAAGCGAAGAACCTaGAGTTCTGCACAGACCGGGGAATGTCCATGGTTCTTGCCAGTG +
Preference number: 5 (lower is better)
Translates to: ACTLTCGAGWRKRRT*SSAQTGECPWFLPV
Trigger: CACTGGCAAGAACCATGGACATTCCCCGGTCTGTGCAGAACTTCAGGTTCTTCGCTTCCTCCAGCCTGCACCACACGTCAGAGTGCACGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR CAA 90 bp CAGCTGGGTGATCCGCTCAGCGGTGGGCTGGCTCCCGGTGAAGGAGATCAGGGGAATACACTTCCCCTGTaGATGGGTCGTAAGAATCTA +
Preference number: 5 (lower is better)
Translates to: QLGDPLSGGLAPGEGDQGNTLPL*MGRKNL
Trigger: TAGATTCTTACGACCCATCAACAGGGGAAGTGTATT...CCCCTGATCTCCTTCACCGGGAGCCAGCCCACCGCTGAGCGGATCACCCAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349305.8
CDS TCA 90 bp GCTGGGAAAGGCTTCTCTGGCGGCCTTGACCGCGGCTTCGATCTTTaGGGAGCAAATGGGAGAAAGGGTCACCTTAAAGCTGTTAGTCCT +
Preference number: 5 (lower is better)
Translates to: AGKGFSGGLDRGFDL*GANGRKGHLKAVSP
Trigger: AGGACTAACAGCTTTAAGGTGACCCTTTCTCCCATTTGCTCCTCAAAGATCGAAGCCGCGGTCAAGGCCGCCAGAGAAGCCTTTCCCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534012.1
CDS GCA 90 bp TCTGACGTGTGGTGCAGGCTGGAGGAAGCGAAGAACCTGAAGTTCTaGACAGACCGGGGAATGTCCATGGTTCTTGCCAGTGCTAAGGTT +
Preference number: 5 (lower is better)
Translates to: SDVWCRLEEAKNLKF*TDRGMSMVLASAKV
Trigger: AACCTTAGCACTGGCAAGAACCATGGACATTCCCCGGTCTGTGCAGAACTTCAGGTTCTTCGCTTCCTCCAGCCTGCACCACACGTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS CCA 90 bp CCCTGCAGCCATCGCTGGAGCTATCTTCCAGGTCAGCAAGTAGAGTaGCAAATTCCAGGGGCTGATCAGACCAGCTATGTAACAAACCTG +
Preference number: 5 (lower is better)
Translates to: PCSHRWSYLPGQQVE*QIPGADQTSYVTNL
Trigger: CAGGTTTGTTACATAGCTGGTCTGATCAGCCCCTGGAATTTGCCACTCTACTTGCTGACCTGGAAGATAGCTCCAGCGATGGCTGCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349305.8
CDS-3UTR CAA 90 bp GTCATGCAGCAGGATTCATCCTTAATGTCTGTTATCACCGTGGGAAGCATAAAGTGGACGCGCCCCACATaGCTGGACCACACGGTAGCC +
Preference number: 5 (lower is better)
Translates to: VMQQDSSLMSVITVGSIKWTRPT*LDHTVA
Trigger: GGCTACCGTGTGGTCCAGCAATGTGGGGCGCGTCCA...CTTTATGCTTCCCACGGTGATAACAGACATTAAGGATGAATCCTGCTGCATGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349305.8
CDS-3UTR CAA 90 bp AAGCTGGACCTGACGGTTGCCGGAATGCACTCATCCAGGTTGGCGTCCTCAAAGAGCCCATACTTAACGTaGTTGGCTCTTTCAATCACC +
Preference number: 5 (lower is better)
Translates to: KLDLTVAGMHSSRLASSKSPYLT*LALSIT
Trigger: GGTGATTGAAAGAGCCAACAACGTTAAGTATGGGCT...CTTTGAGGACGCCAACCTGGATGAGTGCATTCCGGCAACCGTCAGGTCCAGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349305.8
CDS-3UTR CAA 90 bp TCTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCATCTACCACATTGGACGCGCCCCACATaGCTGGACCACACGGTAGCC +
Preference number: 5 (lower is better)
Translates to: SAKSRHSWNSCHDFHLPHWTRPT*LDHTVA
Trigger: GGCTACCGTGTGGTCCAGCAATGTGGGGCGCGTCCA...ATGTGGTAGATGAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR CAA 90 bp GCTAGAGATAACCTTCTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTGCCTGCAGCCAGGCATaGGCCATAGTGGCTCCACCA +
Preference number: 5 (lower is better)
Translates to: ARDNLLPSQGIAGIHAMIACSQA*AIVAPP
Trigger: TGGTGGAGCCACTATGGCCAATGCCTGGCTGCAGGC...AATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAGAAGGTTATCTCTAGC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR CAA 90 bp CCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCATCTACCACATTGAAGCTTCTCTGGCGGCCTaGACCGCGGCTTCGATCTCG +
Preference number: 5 (lower is better)
Translates to: PSQGIAGIHAMIFIYHIEASLAA*TAASIS
Trigger: CGAGATCGAAGCCGCGGTCAAGGCCGCCAGAGAAGC...TTCAATGTGGTAGATGAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR CAA 90 bp TACTTAACGTTGTTGGCTCTTTCAATCACCTCCTCTTCACTATCAAAGGGGACGTCCAGGGAGAGCTTTTaGCAGTGGGGAGCGCTCAGC +
Preference number: 5 (lower is better)
Translates to: YLTLLALSITSSSLSKGTSRESF*QWGALS
Trigger: GCTGAGCGCTCCCCACTGCAAAAAGCTCTCCCTGGA...CGTCCCCTTTGATAGTGAAGAGGAGGTGATTGAAAGAGCCAACAACGTTAAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000349305.8
CDS-3UTR CAA 90 bp AACCTTCTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCATCTACGCCTGCAGCCAGGCATaGGCCATAGTGGCTCCACCA +
Preference number: 5 (lower is better)
Translates to: NLLPSQGIAGIHAMIFIYACSQA*AIVAPP
Trigger: TGGTGGAGCCACTATGGCCAATGCCTGGCTGCAGGC...GTAGATGAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAGAAGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR CAA 90 bp TCTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCATCTACCACATGCCTGCAGCCAGGCATaGGCCATAGTGGCTCCACCA +
Preference number: 5 (lower is better)
Translates to: SAKSRHSWNSCHDFHLPHACSQA*AIVAPP
Trigger: TGGTGGAGCCACTATGGCCAATGCCTGGCTGCAGGC...ATGTGGTAGATGAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR CAA 90 bp TCTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCATCTACCACATTCCAGGGAGAGCTTTTaGCAGTGGGGAGCGCTCAGC +
Preference number: 5 (lower is better)
Translates to: SAKSRHSWNSCHDFHLPHSRESF*QWGALS
Trigger: GCTGAGCGCTCCCCACTGCAAAAAGCTCTCCCTGGA...ATGTGGTAGATGAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR CAA 90 bp CCAATCAATGATCAATTAGCCATGCTAGTGGCTAATAGACAAGGAGATTATCTCTGGACGCGCCCCACATaGCTGGACCACACGGTAGCC +
Preference number: 5 (lower is better)
Translates to: PINDQLAMLVANRQGDYLWTRPT*LDHTVA
Trigger: GGCTACCGTGTGGTCCAGCAATGTGGGGCGCGTCCA...GAGATAATCTCCTTGTCTATTAGCCACTAGCATGGCTAATTGATCATTGATTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265605.7
ENST00000367845.6
CDS-3UTR CAA 90 bp GCTAGAGATAACCTTCTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTCTGATGAGCCAGCAGTaGGTCCAGACCAAGCCAGAC +
Preference number: 5 (lower is better)
Translates to: ARDNLLPSQGIAGIHAMILMSQQ*VQTKPD
Trigger: GTCTGGCTTGGTCTGGACCAACTGCTGGCTCATCAG...AATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAGAAGGTTATCTCTAGC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR CAA 90 bp GCCATGCTAGTGGCTAATAGACAAGGAGATTATCTCCATAATCTCTCCAAAGATTCCAGGGAGAGCTTTTaGCAGTGGGGAGCGCTCAGC +
Preference number: 5 (lower is better)
Translates to: AMLVANRQGDYLHNLSKDSRESF*QWGALS
Trigger: GCTGAGCGCTCCCCACTGCAAAAAGCTCTCCCTGGA...ATCTTTGGAGAGATTATGGAGATAATCTCCTTGTCTATTAGCCACTAGCATGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265605.7
ENST00000367845.6
CDS-3UTR CAA 90 bp GCTAGAGATAACCTTCTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTCAGATTTCACCCTGGTaGGCAAAGCTGGACCTGACG +
Preference number: 5 (lower is better)
Translates to: ARDNLLPSQGIAGIHAMIQISPW*AKLDLT
Trigger: CGTCAGGTCCAGCTTTGCCAACCAGGGTGAAATCTG...AATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAGAAGGTTATCTCTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265605.7
ENST00000367847.2
CDS-3UTR CAA 90 bp TCTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCATCTACCACATCTGATGAGCCAGCAGTaGGTCCAGACCAAGCCAGAC +
Preference number: 5 (lower is better)
Translates to: SAKSRHSWNSCHDFHLPHLMSQQ*VQTKPD
Trigger: GTCTGGCTTGGTCTGGACCAACTGCTGGCTCATCAG...ATGTGGTAGATGAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR CAA 90 bp CCAAATTTGGGCACCTTCAGCAAGAGCTCTCTTGACGTAACTTCTGACCTGGTTGAATGTCCATGGTTCTaGCCAGTGCTAAGGTTTTCC +
Preference number: 5 (lower is better)
Translates to: PNLGTFSKSSLDVTSDLVECPWF*PVLRFS
Trigger: GGAAAACCTTAGCACTGGCAAGAACCATGGACATTC...AACCAGGTCAGAAGTTACGTCAAGAGAGCTCTTGCTGAAGGTGCCCAAATTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349305.8
CDS-3UTR CAA 90 bp AACCTTCTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCATCTACGTCAGCTCACTGGGCTaGGCTATCACAGTGTTCCCT +
Preference number: 5 (lower is better)
Translates to: NLLPSQGIAGIHAMIFIYVSSLG*AITVFP
Trigger: AGGGAACACTGTGATAGCCAAGCCCAGTGAGCTGAC...GTAGATGAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAGAAGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
CDS-3UTR CAA 90 bp AACCTTCTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCATCTACCAGATTTCACCCTGGTaGGCAAAGCTGGACCTGACG +
Preference number: 5 (lower is better)
Translates to: NLLPSQGIAGIHAMIFIYQISPW*AKLDLT
Trigger: CGTCAGGTCCAGCTTTGCCAACCAGGGTGAAATCTG...GTAGATGAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAGAAGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265605.7
ENST00000367847.2
CDS-3UTR CAA 90 bp AACCTTCTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCATCTACCTCACCGCACCAAATTaGGGCACCTTCAGCAAGAGC +
Preference number: 5 (lower is better)
Translates to: NLLPSQGIAGIHAMIFIYLTAPN*GTFSKS
Trigger: GCTCTTGCTGAAGGTGCCCAAATTTGGTGCGGTGAG...GTAGATGAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAGAAGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR CAA 90 bp AGAGATAACCTTCTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCCTCACCGCACCAAATTaGGGCACCTTCAGCAAGAGC +
Preference number: 5 (lower is better)
Translates to: RDNLLPSQGIAGIHAMIFLTAPN*GTFSKS
Trigger: GCTCTTGCTGAAGGTGCCCAAATTTGGTGCGGTGAG...GAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAGAAGGTTATCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR CAA 90 bp TCCACATTGAAAATAGACAGTATCTCTTCACTAGTGGGTAAAGTTACTAAGAACTGGACGCGCCCCACATaGCTGGACCACACGGTAGCC +
Preference number: 5 (lower is better)
Translates to: STLKIDSISSLVGKVTKNWTRPT*LDHTVA
Trigger: GGCTACCGTGTGGTCCAGCAATGTGGGGCGCGTCCA...GTTCTTAGTAACTTTACCCACTAGTGAAGAGATACTGTCTATTTTCAATGTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR CAA 90 bp CCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCATCTACCACATTGAACTGATGAGCCAGCAGTaGGTCCAGACCAAGCCAGAC +
Preference number: 5 (lower is better)
Translates to: PSQGIAGIHAMIFIYHIELMSQQ*VQTKPD
Trigger: GTCTGGCTTGGTCTGGACCAACTGCTGGCTCATCAG...TTCAATGTGGTAGATGAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR CAA 90 bp GACCTGACGGTTGCCGGAATGCACTCATCCAGGTTGGCGTCCTCAAAGATGATGTTTTCCGAGTCCACATaGAAAATAGACAGTATCTCT +
Preference number: 5 (lower is better)
Translates to: DLTVAGMHSSRLASSKMMFSEST*KIDSIS
Trigger: AGAGATACTGTCTATTTTCAATGTGGACTCGGAAAA...CATCATCTTTGAGGACGCCAACCTGGATGAGTGCATTCCGGCAACCGTCAGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349305.8
CDS-3UTR CAA 90 bp CTCAGTGAAGAAGTCGTAAGAGTCCTTGGCTCCCTCTCTACCTATTCCAGAACTGTTCCAAACACAATATaGACCACACCTGGTGGAACA +
Preference number: 5 (lower is better)
Translates to: LSEEVVRVLGSLSTYSRTVPNTI*TTPGGT
Trigger: TGTTCCACCAGGTGTGGTCAATATTGTGTTTGGAAC...AGTTCTGGAATAGGTAGAGAGGGAGCCAAGGACTCTTACGACTTCTTCACTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349305.8
CDS CCA 90 bp TTTCTCCAAATGTGCTTTACTTATCAGAGCACCTATGCTCACCAGTaGATCAGAGGGAATGCCGACTTTCCACTTTCTGGTAGCTTCTAC +
Preference number: 5 (lower is better)
Translates to: FLQMCFTYQSTYAHQ*IRGNADFPLSGSFY
Trigger: GTAGAAGCTACCAGAAAGTGGAAAGTCGGCATTCCCTCTGATCCACTGGTGAGCATAGGTGCTCTGATAAGTAAAGCACATTTGGAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265605.7
ENST00000367847.2
CDS-3UTR CAA 90 bp GGTCCAATCAATGATCAATTAGCCATGCTAGTGGCTAATAGACAAGGAGATTATGTCAGCTCACTGGGCTaGGCTATCACAGTGTTCCCT +
Preference number: 5 (lower is better)
Translates to: GPINDQLAMLVANRQGDYVSSLG*AITVFP
Trigger: AGGGAACACTGTGATAGCCAAGCCCAGTGAGCTGAC...ATAATCTCCTTGTCTATTAGCCACTAGCATGGCTAATTGATCATTGATTGGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265605.7
ENST00000367845.6
CDS-3UTR CAA 90 bp CTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCATCTACCACATTGCTTTATCCAGGAGTTaGCACAACATCCACGCAGTC +
Preference number: 5 (lower is better)
Translates to: LPSQGIAGIHAMIFIYHIALSRS*HNIHAV
Trigger: GACTGCGTGGATGTTGTGCAAACTCCTGGATAAAGC...AATGTGGTAGATGAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
CDS-3UTR CAA 90 bp AGAGATAACCTTCTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCGCTTTATCCAGGAGTTaGCACAACATCCACGCAGTC +
Preference number: 5 (lower is better)
Translates to: RDNLLPSQGIAGIHAMIFALSRS*HNIHAV
Trigger: GACTGCGTGGATGTTGTGCAAACTCCTGGATAAAGC...GAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAGAAGGTTATCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
CDS-3UTR CAA 90 bp CTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCATCTACCACATTATGCACTCATCCAGGTaGGCGTCCTCAAAGATGATG +
Preference number: 5 (lower is better)
Translates to: LPSQGIAGIHAMIFIYHIMHSSR*ASSKMM
Trigger: CATCATCTTTGAGGACGCCAACCTGGATGAGTGCAT...AATGTGGTAGATGAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR CAA 90 bp GAGGAGCCTGACAACTGGCATCATTGTTCTATCTTCCTACTTATAAGTCTTTTTCTCACCGCACCAAATTaGGGCACCTTCAGCAAGAGC +
Preference number: 5 (lower is better)
Translates to: EEPDNWHHCSIFLLISLFLTAPN*GTFSKS
Trigger: GCTCTTGCTGAAGGTGCCCAAATTTGGTGCGGTGAG...AAAAAGACTTATAAGTAGGAAGATAGAACAATGATGCCAGTTGTCAGGCTCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
CDS-3UTR CAA 90 bp CAAGTAGCTGGGGCTATAGGCAGAGGGCACCACACCAAGCTAATTTTTAAACTTCCATACTTAACGTTGTaGGCTCTTTCAATCACCTCC +
Preference number: 5 (lower is better)
Translates to: QVAGAIGRGHHTKLIFKLPYLTL*ALSITS
Trigger: GGAGGTGATTGAAAGAGCCAACAACGTTAAGTATGG...AAGTTTAAAAATTAGCTTGGTGTGGTGCCCTCTGCCTATAGCCCCAGCTACTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265605.7
ENST00000367845.6
CDS-3UTR CAA 90 bp AGAGATAACCTTCTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCGAATGTCCATGGTTCTaGCCAGTGCTAAGGTTTTCC +
Preference number: 5 (lower is better)
Translates to: RDNLLPSQGIAGIHAMIFECPWF*PVLRFS
Trigger: GGAAAACCTTAGCACTGGCAAGAACCATGGACATTC...GAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAGAAGGTTATCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR CAA 90 bp CAAGGCATAGCTGGAATTCATGCCATGATTTTCATCTACCACATTGAACAACTGATGCACTCATCCAGGTaGGCGTCCTCAAAGATGATG +
Preference number: 5 (lower is better)
Translates to: QGIAGIHAMIFIYHIEQLMHSSR*ASSKMM
Trigger: CATCATCTTTGAGGACGCCAACCTGGATGAGTGCAT...CAGTTGTTCAATGTGGTAGATGAAAATCATGGCATGAATTCCAGCTATGCCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR CAA 90 bp AAGTTACTAAGAACTGAGGATAAGCTAGAGATAACCTTCTGCCAAGTCAAGGCAATGCACTCATCCAGGTaGGCGTCCTCAAAGATGATG +
Preference number: 5 (lower is better)
Translates to: KLLRTEDKLEITFCQVKAMHSSR*ASSKMM
Trigger: CATCATCTTTGAGGACGCCAACCTGGATGAGTGCAT...TGCCTTGACTTGGCAGAAGGTTATCTCTAGCTTATCCTCAGTTCTTAGTAACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR CAA 90 bp GCTAGAGATAACCTTCTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTAATACACTTCCCCTGTaGATGGGTCGTAAGAATCTA +
Preference number: 5 (lower is better)
Translates to: ARDNLLPSQGIAGIHAMINTLPL*MGRKNL
Trigger: TAGATTCTTACGACCCATCAACAGGGGAAGTGTATT...AATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAGAAGGTTATCTCTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR CAA 90 bp AAGTTACTAAGAACTGAGGATAAGCTAGAGATAACCTTCTGCCAAGTCAAGGCAGAATGTCCATGGTTCTaGCCAGTGCTAAGGTTTTCC +
Preference number: 5 (lower is better)
Translates to: KLLRTEDKLEITFCQVKAECPWF*PVLRFS
Trigger: GGAAAACCTTAGCACTGGCAAGAACCATGGACATTC...TGCCTTGACTTGGCAGAAGGTTATCTCTAGCTTATCCTCAGTTCTTAGTAACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR CAA 90 bp AACCTTCTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCATCTACAGCCCATACTTAACGTaGTTGGCTCTTTCAATCACC +
Preference number: 5 (lower is better)
Translates to: NLLPSQGIAGIHAMIFIYSPYLT*LALSIT
Trigger: GGTGATTGAAAGAGCCAACAACGTTAAGTATGGGCT...GTAGATGAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAGAAGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR CAA 90 bp CTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCATCTACCACATTAATACACTTCCCCTGTaGATGGGTCGTAAGAATCTA +
Preference number: 5 (lower is better)
Translates to: LPSQGIAGIHAMIFIYHINTLPL*MGRKNL
Trigger: TAGATTCTTACGACCCATCAACAGGGGAAGTGTATT...AATGTGGTAGATGAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR CAA 90 bp CCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCATCTACCACATTGAAGTTCCAAACACAATATaGACCACACCTGGTGGAACA +
Preference number: 5 (lower is better)
Translates to: PSQGIAGIHAMIFIYHIEVPNTI*TTPGGT
Trigger: TGTTCCACCAGGTGTGGTCAATATTGTGTTTGGAAC...TTCAATGTGGTAGATGAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR CAA 90 bp CAAGGCATAGCTGGAATTCATGCCATGATTTTCATCTACCACATTGAACAACTGAGCCCATACTTAACGTaGTTGGCTCTTTCAATCACC +
Preference number: 5 (lower is better)
Translates to: QGIAGIHAMIFIYHIEQLSPYLT*LALSIT
Trigger: GGTGATTGAAAGAGCCAACAACGTTAAGTATGGGCT...CAGTTGTTCAATGTGGTAGATGAAAATCATGGCATGAATTCCAGCTATGCCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR CAA 90 bp CTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCATCTACCACATTTTAACGGTGATGGTTTaGATCTCAGTGAAGAAGTCG +
Preference number: 5 (lower is better)
Translates to: LPSQGIAGIHAMIFIYHILTVMV*ISVKKS
Trigger: CGACTTCTTCACTGAGATCAAAACCATCACCGTTAA...AATGTGGTAGATGAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR CAA 90 bp AACCTTCTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCATCTACTTAACGGTGATGGTTTaGATCTCAGTGAAGAAGTCG +
Preference number: 5 (lower is better)
Translates to: NLLPSQGIAGIHAMIFIYLTVMV*ISVKKS
Trigger: CGACTTCTTCACTGAGATCAAAACCATCACCGTTAA...GTAGATGAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAGAAGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR CAA 90 bp CAAGTAGCTGGGGCTATAGGCAGAGGGCACCACACCAAGCTAATTTTTAAACTTTTTTCCGAGTCCACATaGAAAATAGACAGTATCTCT +
Preference number: 5 (lower is better)
Translates to: QVAGAIGRGHHTKLIFKLFSEST*KIDSIS
Trigger: AGAGATACTGTCTATTTTCAATGTGGACTCGGAAAA...AAGTTTAAAAATTAGCTTGGTGTGGTGCCCTCTGCCTATAGCCCCAGCTACTTG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000265605.7
ENST00000367845.6
CDS-3UTR CAA 90 bp AAGTTACTAAGAACTGAGGATAAGCTAGAGATAACCTTCTGCCAAGTCAAGGCAAATACACTTCCCCTGTaGATGGGTCGTAAGAATCTA +
Preference number: 5 (lower is better)
Translates to: KLLRTEDKLEITFCQVKANTLPL*MGRKNL
Trigger: TAGATTCTTACGACCCATCAACAGGGGAAGTGTATT...TGCCTTGACTTGGCAGAAGGTTATCTCTAGCTTATCCTCAGTTCTTAGTAACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR CAA 90 bp CCAATCAATGATCAATTAGCCATGCTAGTGGCTAATAGACAAGGAGATTATCTCGTTCCAAACACAATATaGACCACACCTGGTGGAACA +
Preference number: 5 (lower is better)
Translates to: PINDQLAMLVANRQGDYLVPNTI*TTPGGT
Trigger: TGTTCCACCAGGTGTGGTCAATATTGTGTTTGGAAC...GAGATAATCTCCTTGTCTATTAGCCACTAGCATGGCTAATTGATCATTGATTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265605.7
ENST00000367845.6
CDS-3UTR CAA 90 bp GGTCCAATCAATGATCAATTAGCCATGCTAGTGGCTAATAGACAAGGAGATTATAGCCCATACTTAACGTaGTTGGCTCTTTCAATCACC +
Preference number: 5 (lower is better)
Translates to: GPINDQLAMLVANRQGDYSPYLT*LALSIT
Trigger: GGTGATTGAAAGAGCCAACAACGTTAAGTATGGGCT...ATAATCTCCTTGTCTATTAGCCACTAGCATGGCTAATTGATCATTGATTGGACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265605.7
ENST00000367845.6
CDS-3UTR CAA 90 bp AAGTTACTAAGAACTGAGGATAAGCTAGAGATAACCTTCTGCCAAGTCAAGGCATTAACGGTGATGGTTTaGATCTCAGTGAAGAAGTCG +
Preference number: 5 (lower is better)
Translates to: KLLRTEDKLEITFCQVKALTVMV*ISVKKS
Trigger: CGACTTCTTCACTGAGATCAAAACCATCACCGTTAA...TGCCTTGACTTGGCAGAAGGTTATCTCTAGCTTATCCTCAGTTCTTAGTAACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR CAA 90 bp CTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCATCTACCACATTTTTTCCGAGTCCACATaGAAAATAGACAGTATCTCT +
Preference number: 5 (lower is better)
Translates to: LPSQGIAGIHAMIFIYHIFSEST*KIDSIS
Trigger: AGAGATACTGTCTATTTTCAATGTGGACTCGGAAAA...AATGTGGTAGATGAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAG
40% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR CAA 90 bp AGAGATAACCTTCTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCCATTTATTGCTTCTTTaGGGGTTAGCAAGTTGTAAG +
Preference number: 5 (lower is better)
Translates to: RDNLLPSQGIAGIHAMIFHLLLL*GLASCK
Trigger: CTTACAACTTGCTAACCCCAAAAGAAGCAATAAATG...GAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAGAAGGTTATCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265605.7
ENST00000367845.6
CDS-3UTR CAA 90 bp AACCTTCTGCCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCATCTACCATTTATTGCTTCTTTaGGGGTTAGCAAGTTGTAAG +
Preference number: 5 (lower is better)
Translates to: NLLPSQGIAGIHAMIFIYHLLLL*GLASCK
Trigger: CTTACAACTTGCTAACCCCAAAAGAAGCAATAAATG...GTAGATGAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGGCAGAAGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265605.7
ENST00000367845.6
CDS-3UTR CAA 90 bp TCCACATTGAAAATAGACAGTATCTCTTCACTAGTGGGTAAAGTTACTAAGAACCCATACTTAACGTTGTaGGCTCTTTCAATCACCTCC +
Preference number: 5 (lower is better)
Translates to: STLKIDSISSLVGKVTKNPYLTL*ALSITS
Trigger: GGAGGTGATTGAAAGAGCCAACAACGTTAAGTATGG...GTTCTTAGTAACTTTACCCACTAGTGAAGAGATACTGTCTATTTTCAATGTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS-3UTR CAA 90 bp CCAAGTCAAGGCATAGCTGGAATTCATGCCATGATTTTCATCTACCACATTGAATTTTCCGAGTCCACATaGAAAATAGACAGTATCTCT +
Preference number: 5 (lower is better)
Translates to: PSQGIAGIHAMIFIYHIEFSEST*KIDSIS
Trigger: AGAGATACTGTCTATTTTCAATGTGGACTCGGAAAA...TTCAATGTGGTAGATGAAAATCATGGCATGAATTCCAGCTATGCCTTGACTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS GCA 72 bp CCACCTGGTTCAGGACCCGTGAGCGCTCCTGGGGGCTaGGGGATGACCAGCTGGGAAAGGCTTCTCTGGCGG +
Preference number: 6 (lower is better)
Translates to: PPGSGPVSAPGG*GMTSWERLLWR
Trigger: CCGCCAGAGAAGCCTTTCCCAGCTGGTCATCCCGCAGCCCCCAGGAGCGCTCACGGGTCCTGAACCAGGTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
ENST00000534012.1
CDS CCA 72 bp AAATCCGCCACCTGGTTCAGGACCCGTGAGCGCTCCTaGGGGCTGCGGGATGACCAGCTGGGAAAGGCTTCT +
Preference number: 6 (lower is better)
Translates to: KSATWFRTRERS*GLRDDQLGKAS
Trigger: AGAAGCCTTTCCCAGCTGGTCATCCCGCAGCCCCCAGGAGCGCTCACGGGTCCTGAACCAGGTGGCGGATTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
ENST00000534012.1
CDS TCA 72 bp CCTCACCCACCCTGGGCCCGGTTCCAAACACAATATTaGCCACACCTGGTGGAACACCGACTCCCACCGGGG +
Preference number: 6 (lower is better)
Translates to: PHPPWARFQTQY*PHLVEHRLPPG
Trigger: CCCCGGTGGGAGTCGGTGTTCCACCAGGTGTGGTCAATATTGTGTTTGGAACCGGGCCCAGGGTGGGTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367847.2
CDS CAA 72 bp GCCTCACCCACCCTGGGCCCGGTTCCAAACACAATATaGACCACACCTGGTGGAACACCGACTCCCACCGGG +
Preference number: 6 (lower is better)
Translates to: ASPTLGPVPNTI*TTPGGTPTPTG
Trigger: CCCGGTGGGAGTCGGTGTTCCACCAGGTGTGGTCAATATTGTGTTTGGAACCGGGCCCAGGGTGGGTGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367847.2
CDS CAA 90 bp TGGGGGCTGCGGGATGACCAGCTGGGAAAGGCTTCTCTGGCGGCCTaGACCGCGGCTTCGATCTTTGAGGAGCAAATGGGAGAAAGGGTC +
Preference number: 6 (lower is better)
Translates to: WGLRDDQLGKASLAA*TAASIFEEQMGERV
Trigger: GACCCTTTCTCCCATTTGCTCCTCAAAGATCGAAGCCGCGGTCAAGGCCGCCAGAGAAGCCTTTCCCAGCTGGTCATCCCGCAGCCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534012.1
CDS TCA 72 bp GGGATGACCAGCTGGGAAAGGCTTCTCTGGCGGCCTTaGCCGCGGCTTCGATCTTTGAGGAGCAAATGGGAG +
Preference number: 6 (lower is better)
Translates to: GMTSWERLLWRP*PRLRSLRSKWE
Trigger: CTCCCATTTGCTCCTCAAAGATCGAAGCCGCGGTCAAGGCCGCCAGAGAAGCCTTTCCCAGCTGGTCATCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534012.1
CDS GCA 72 bp TCTTTAGACTCGGCCTGGGCAAACTCCTCCAGGGACTaGTCCAGCAAATCCGCCACCTGGTTCAGGACCCGT +
Preference number: 6 (lower is better)
Translates to: SLDSAWANSSRD*SSKSATWFRTR
Trigger: ACGGGTCCTGAACCAGGTGGCGGATTTGCTGGAGCAGTCCCTGGAGGAGTTTGCCCAGGCCGAGTCTAAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
ENST00000534012.1
CDS GCA 72 bp CCCAGGTGGTCCATCTGCGTGCACTCTGACGTGTGGTaGAGGCTGGAGGAAGCGAAGAACCTGAAGTTCTGC +
Preference number: 6 (lower is better)
Translates to: PRWSICVHSDVW*RLEEAKNLKFC
Trigger: GCAGAACTTCAGGTTCTTCGCTTCCTCCAGCCTGCACCACACGTCAGAGTGCACGCAGATGGACCACCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS CCA 72 bp CAGCCCAGGTGGTCCATCTGCGTGCACTCTGACGTGTaGTGCAGGCTGGAGGAAGCGAAGAACCTGAAGTTC +
Preference number: 6 (lower is better)
Translates to: QPRWSICVHSDV*CRLEEAKNLKF
Trigger: GAACTTCAGGTTCTTCGCTTCCTCCAGCCTGCACCACACGTCAGAGTGCACGCAGATGGACCACCTGGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS TCA 72 bp GGGATGACCAGCTGGGAAAGGCTTCTCTGGCGGCCTTaGCCGCGGCTTCGATCTCGTCTTTTCCACTATTTG +
Preference number: 6 (lower is better)
Translates to: GMTSWERLLWRP*PRLRSRLFHYL
Trigger: CAAATAGTGGAAAAGACGAGATCGAAGCCGCGGTCAAGGCCGCCAGAGAAGCCTTTCCCAGCTGGTCATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS TCA 72 bp CTGACGTGTGGTGCAGGCTGGAGGAAGCGAAGAACCTaGAGTTCTGCACAGACCGGGGAATGTCCATGGTTC +
Preference number: 6 (lower is better)
Translates to: LTCGAGWRKRRT*SSAQTGECPWF
Trigger: GAACCATGGACATTCCCCGGTCTGTGCAGAACTTCAGGTTCTTCGCTTCCTCCAGCCTGCACCACACGTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS TCA 72 bp GGCTTCTCTGGCGGCCTTGACCGCGGCTTCGATCTTTaGGGAGCAAATGGGAGAAAGGGTCACCTTAAAGCT +
Preference number: 6 (lower is better)
Translates to: GFSGGLDRGFDL*GANGRKGHLKA
Trigger: AGCTTTAAGGTGACCCTTTCTCCCATTTGCTCCTCAAAGATCGAAGCCGCGGTCAAGGCCGCCAGAGAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534012.1
CDS GCA 72 bp GATTTCACCCTGGTTGGCAAAGCTGGACCTGACGGTTaGCGGAATGCACTCATCCAGGTTGGCGTCCTCAAA +
Preference number: 6 (lower is better)
Translates to: DFTLVGKAGPDG*RNALIQVGVLK
Trigger: TTTGAGGACGCCAACCTGGATGAGTGCATTCCGGCAACCGTCAGGTCCAGCTTTGCCAACCAGGGTGAAATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265605.7
ENST00000367847.2
CDS CAA 90 bp CCTGGCAGGGAGGCTCAACTTATCCACTCCCTCACCGCACCAAATTaGGGCACCTTCAGCAAGAGCTCTCTTGACGTAACTTCTGACCAG +
Preference number: 6 (lower is better)
Translates to: PGREAQLIHSLTAPN*GTFSKSSLDVTSDQ
Trigger: CTGGTCAGAAGTTACGTCAAGAGAGCTCTTGCTGAAGGTGCCCAAATTTGGTGCGGTGAGGGAGTGGATAAGTTGAGCCTCCCTGCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460753.1
CDS CAA 90 bp CCTGGCAGGGAGGCTCAACTTATCCACTCCCTCACCGCACCAAATTaGGGCACCTTCAGCAAGAGCTCTCTTGACGTAACTTCTGACTTT +
Preference number: 6 (lower is better)
Translates to: PGREAQLIHSLTAPN*GTFSKSSLDVTSDF
Trigger: AAAGTCAGAAGTTACGTCAAGAGAGCTCTTGCTGAAGGTGCCCAAATTTGGTGCGGTGAGGGAGTGGATAAGTTGAGCCTCCCTGCCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265605.7
ENST00000367847.2
CDS CCA 72 bp GAAAGGGTCACCTTAAAGCTGTTAGTCCTTGGGGGATaGACAAAACCAGAATCCTCAGGTCTCCACACACCT +
Preference number: 6 (lower is better)
Translates to: ERVTLKLLVLGG*TKPESSGLHTP
Trigger: AGGTGTGTGGAGACCTGAGGATTCTGGTTTTGTCCATCCCCCAAGGACTAACAGCTTTAAGGTGACCCTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534012.1
CDS CCA 72 bp AATGGGAGAAAGGGTCACCTTAAAGCTGTTAGTCCTTaGGGGATGGACAAAACCAGAATCCTCAGGTCTCCA +
Preference number: 6 (lower is better)
Translates to: NGRKGHLKAVSP*GMDKTRILRSP
Trigger: TGGAGACCTGAGGATTCTGGTTTTGTCCATCCCCCAAGGACTAACAGCTTTAAGGTGACCCTTTCTCCCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534012.1
CDS GCA 72 bp CGGCTTCGATCTCGTCTTTTCCACTATTTGGCACTCTaGAATACACTTCCCCTGTTGATGGGTCGTAAGAAT +
Preference number: 6 (lower is better)
Translates to: RLRSRLFHYLAL*NTLPLLMGRKN
Trigger: ATTCTTACGACCCATCAACAGGGGAAGTGTATTGCAGAGTGCCAAATAGTGGAAAAGACGAGATCGAAGCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2
CDS CCA 72 bp ATGTGCTTTACTTATCAGAGCACCTATGCTCACCAGTaGATCAGAGGGAATGCCGACTTTCCACTTTCTGGT +
Preference number: 6 (lower is better)
Translates to: MCFTYQSTYAHQ*IRGNADFPLSG
Trigger: ACCAGAAAGTGGAAAGTCGGCATTCCCTCTGATCCACTGGTGAGCATAGGTGCTCTGATAAGTAAAGCACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265605.7
ENST00000367847.2
CDS GCA 72 bp AAGTGCGTTTGTTCCAGCCATAGCAAGGAAAAATTCTaGCTTTCCTCTTTACGACTGAGCACTCAGGTTGTC +
Preference number: 6 (lower is better)
Translates to: KCVCSSHSKEKF*LSSLRLSTQVV
Trigger: GACAACCTGAGTGCTCAGTCGTAAAGAGGAAAGGCAGAATTTTTCCTTGCTATGGCTGGAACAAACGCACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367845.6
CDS CCA 72 bp ATTCACTATAGATGCTCTTCTGGACAAAGATCCTGCTaGTACAGAGACAGATTTCACCCTGGTTGGCAAAGC +
Preference number: 6 (lower is better)
Translates to: IHYRCSSGQRSC*YRDRFHPGWQS
Trigger: GCTTTGCCAACCAGGGTGAAATCTGTCTCTGTACCAGCAGGATCTTTGTCCAGAAGAGCATCTATAGTGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265605.7
ENST00000367847.2
CDS GCA 72 bp AAAATTCACTATAGATGCTCTTCTGGACAAAGATCCTaGTGGTACAGAGACAGATTTCACCCTGGTTGGCAA +
Preference number: 6 (lower is better)
Translates to: KIHYRCSSGQRS*WYRDRFHPGWQ
Trigger: TTGCCAACCAGGGTGAAATCTGTCTCTGTACCAGCAGGATCTTTGTCCAGAAGAGCATCTATAGTGAATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265605.7
ENST00000367847.2
CDS CAA 72 bp TTCCACTATTTGGCACTCTGCAATACACTTCCCCTGTaGATGGGTCGTAAGAATCTATATATGAGCTACAAG +
Preference number: 6 (lower is better)
Translates to: FHYLALCNTLPL*MGRKNLYMSYK
Trigger: CTTGTAGCTCATATATAGATTCTTACGACCCATCAACAGGGGAAGTGTATTGCAGAGTGCCAAATAGTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265605.7
ENST00000349305.8
ENST00000367845.6
ENST00000367847.2