RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ALDH5A1 (Homo sapiens)

Ensembl gene IDs: ENSG00000112294

Ensembl transcript IDs: ENST00000348925.2, ENST00000357578.8, ENST00000479394.2, ENST00000491546.5, ENST00000672352.1, ENST00000672557.1, ENST00000672619.1, ENST00000672652.1, ENST00000675422.1

Found 709 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GAAGGGCGTGTCTTCGGCAGGCTTCACCACGACAGTACAGCCGGCTaGCAGGGCGGCCCCCACCTTCCGGGTGATCATGGCACTGGGGAA +
Preference number: 1 (lower is better)
Translates to: EGRVFGRLHHDSTAG*QGGPHLPGDHGTGE
Trigger: TTCCCCAGTGCCATGATCACCCGGAAGGTGGGGGCCGCCCTGGCAGCCGGCTGTACTGTCGTGGTGAAGCCTGCCGAAGACACGCCCTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672557.1
3UTR GCA 90 bp AGCCACGCCTATGGGCTGCTTGAGGACCAGGGCCCGCCTGTCCTTTaGCGGGGTGTGGATAATGTCTCCGTAAACACGGCGGGCTTCCTC +
Preference number: 1 (lower is better)
Translates to: SHAYGLLEDQGPPVL*RGVDNVSVNTAGFL
Trigger: GAGGAAGCCCGCCGTGTTTACGGAGACATTATCCACACCCCGGCAAAGGACAGGCGGGCCCTGGTCCTCAAGCAGCCCATAGGCGTGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672557.1
3UTR TCA 90 bp TGTTCTGTAGCGACATGGGGGATGGTTGTGCCACTGCCCAGGCAGTaGTCAAGCCTTTGTGACGGCCCATGGGGCTGGGCCTGCCTTGTG +
Preference number: 1 (lower is better)
Translates to: CSVATWGMVVPLPRQ*SSLCDGPWGWACLV
Trigger: CACAAGGCAGGCCCAGCCCCATGGGCCGTCACAAAGGCTTGATCACTGCCTGGGCAGTGGCACAACCATCCCCCATGTCGCTACAGAACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR CCA 90 bp GGCTCAGGTGACAGCCACTTACTCAGGCTCAGGTCGGTGGGCAAGTaGGCACTGGCCTCCTCCCATCTTGGCAAAGCCACTGACAGTAGG +
Preference number: 1 (lower is better)
Translates to: GSGDSHLLRLRSVGK*ALASSHLGKATDSR
Trigger: CCTACTGTCAGTGGCTTTGCCAAGATGGGAGGAGGCCAGTGCCCACTTGCCCACCGACCTGAGCCTGAGTAAGTGGCTGTCACCTGAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR GCA 90 bp CACACGCCCAAGGCAACAAGGCCACTCAGGGAAGGAGCCAGGCCATaGCACTGCGTGCCTTCCATCCTACCAAGCTGCTTCTGCTATTCT +
Preference number: 1 (lower is better)
Translates to: HTPKATRPLREGARP*HCVPSILPSCFCYS
Trigger: AGAATAGCAGAAGCAGCTTGGTAGGATGGAAGGCACGCAGTGGCATGGCCTGGCTCCTTCCCTGAGTGGCCTTGTTGCCTTGGGCGTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR TCA 90 bp AAGGCCTGTATGGAATCTCCACTGTATCCATGGGATGGGAGGTGCTaGACACACGCCCAAGGCAACAAGGCCACTCAGGGAAGGAGCCAG +
Preference number: 1 (lower is better)
Translates to: KACMESPLYPWDGRC*THAQGNKATQGRSQ
Trigger: CTGGCTCCTTCCCTGAGTGGCCTTGTTGCCTTGGGCGTGTGTTCAGCACCTCCCATCCCATGGATACAGTGGAGATTCCATACAGGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR CCA 90 bp GGAGATGAATTTCAGCTCTTCCTTCTCCTTGGGACCTTGGGAATGTaGCTAGTACACTCCAGGCCAGATGCTAGGCAGCTCCCTGTGTGC +
Preference number: 1 (lower is better)
Translates to: GDEFQLFLLLGTLGM*LVHSRPDARQLPVC
Trigger: GCACACAGGGAGCTGCCTAGCATCTGGCCTGGAGTGTACTAGCCACATTCCCAAGGTCCCAAGGAGAAGGAAGAGCTGAAATTCATCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR TCA 90 bp GTATCGAACTTGATAACTGGTGCCAGAGGCCCGAAAGTCTCTTCATaGGTGCACAGCATGTCCTGGGTGACATTGCACAGCAGGGTAGGC +
Preference number: 1 (lower is better)
Translates to: VSNLITGARGPKVSS*VHSMSWVTLHSRVG
Trigger: GCCTACCCTGCTGTGCAATGTCACCCAGGACATGCTGTGCACTCATGAAGAGACTTTCGGGCCTCTGGCACCAGTTATCAAGTTCGATAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672652.1
3UTR TCA 90 bp TCACTCCACCAAAAGGGCACTCCACAGAGGAAATTAATCCTTCGTTaGCGCCAACCATGCCCACTTCCAGCTGCTCTGCCACTCTCCAGA +
Preference number: 1 (lower is better)
Translates to: SLHQKGTPQRKLILR*RQPCPLPAALPLSR
Trigger: TCTGGAGAGTGGCAGAGCAGCTGGAAGTGGGCATGGTTGGCGTCAACGAAGGATTAATTTCCTCTGTGGAGTGCCCTTTTGGTGGAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672652.1
3UTR CCA 90 bp GTAAACCCAGTGCTGGTTCTCTGGGAGTCTGCAGCCACAGGCACGTaGCACATATTGGTCCCTAGTTACATTAAGGGCAGGGGTAGGATT +
Preference number: 1 (lower is better)
Translates to: VNPVLVLWESAATGT*HILVPSYIKGRGRI
Trigger: AATCCTACCCCTGCCCTTAATGTAACTAGGGACCAATATGTGCCACGTGCCTGTGGCTGCAGACTCCCAGAGAACCAGCACTGGGTTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR TCA 90 bp TTCCTTGGCATTCTTTCGAGAACAGGGAATAACATTGTATACACCTaGAGGAATCCCAGCCTGGCTTGCAAGCTCAGCCAGGGCCAGGGC +
Preference number: 1 (lower is better)
Translates to: FLGILSRTGNNIVYT*RNPSLACKLSQGQG
Trigger: GCCCTGGCCCTGGCTGAGCTTGCAAGCCAGGCTGGGATTCCTTCAGGTGTATACAATGTTATTCCCTGTTCTCGAAAGAATGCCAAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672557.1
3UTR GCA 90 bp TACTCATCAATGCCATACTTGGACCCCTCTCGCCCAAGGCCGGACTaGTTCACTCCACCAAAAGGGCACTCCACAGAGGAAATTAATCCT +
Preference number: 1 (lower is better)
Translates to: YSSMPYLDPSRPRPD*FTPPKGHSTEEINP
Trigger: AGGATTAATTTCCTCTGTGGAGTGCCCTTTTGGTGGAGTGAAGCAGTCCGGCCTTGGGCGAGAGGGGTCCAAGTATGGCATTGATGAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672652.1
3UTR CCA 90 bp TGCTGGTTCTCTGGGAGTCTGCAGCCACAGGCACGTGGCACATATTaGTCCCTAGTTACATTAAGGGCAGGGGTAGGATTTGCATCTGTT +
Preference number: 1 (lower is better)
Translates to: CWFSGSLQPQARGTY*SLVTLRAGVGFASV
Trigger: AACAGATGCAAATCCTACCCCTGCCCTTAATGTAACTAGGGACCAATATGTGCCACGTGCCTGTGGCTGCAGACTCCCAGAGAACCAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR GCA 90 bp GGGAGAGGTGCTCCTTCGTGCCTCACAGAAGCACGGACAATTCTGTaGTATTTATTGTCTTTGAAAGAGGGTTCACTCAAACCTCTGCCG +
Preference number: 1 (lower is better)
Translates to: GRGAPSCLTEARTIL*YLLSLKEGSLKPLP
Trigger: CGGCAGAGGTTTGAGTGAACCCTCTTTCAAAGACAATAAATAGCACAGAATTGTCCGTGCTTCTGTGAGGCACGAAGGAGCACCTCTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR CCA 90 bp TGTCCAGTGTTCCTAAATTTAGATGCCATGGCCCCTGCTACAGCCTaGTCCACGTTGGCACTGTCAAATACTATAAATGGAGCAAGGCCG +
Preference number: 1 (lower is better)
Translates to: CPVFLNLDAMAPATA*STLALSNTINGARP
Trigger: CGGCCTTGCTCCATTTATAGTATTTGACAGTGCCAACGTGGACCAGGCTGTAGCAGGGGCCATGGCATCTAAATTTAGGAACACTGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672652.1
3UTR TCA 90 bp CGTGCCTCACAGAAGCACGGACAATTCTGTGCTATTTATTGTCTTTaGAAGAGGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGC +
Preference number: 1 (lower is better)
Translates to: RASQKHGQFCAIYCL*KRVHSNLCRNTSRC
Trigger: GCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCCTCTTTCAAAGACAATAAATAGCACAGAATTGTCCGTGCTTCTGTGAGGCACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR GCA 90 bp ATGGCCTCGGCGAATGCTTTTACAAAGGCATCATGGATGCCCCTTTaGACCAAGAATTGGTTTGAGCAAACACAAGTCTGTCCAGTGTTC +
Preference number: 1 (lower is better)
Translates to: MASANAFTKASWMPL*TKNWFEQTQVCPVF
Trigger: GAACACTGGACAGACTTGTGTTTGCTCAAACCAATTCTTGGTGCAAAGGGGCATCCATGATGCCTTTGTAAAAGCATTCGCCGAGGCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672652.1
3UTR CCA 90 bp CACAGACAGAGATGGGGAAAGGAAGGTGCTTCGTCTCCACCTACTTaGCCGCCTAATTGGATTTGCATCTGTTTAAGATTACGGAGTCTT +
Preference number: 1 (lower is better)
Translates to: HRQRWGKEGASSPPT*PPNWICICLRLRSL
Trigger: AAGACTCCGTAATCTTAAACAGATGCAAATCCAATTAGGCGGCCAAGTAGGTGGAGACGAAGCACCTTCCTTTCCCCATCTCTGTCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR GCA 90 bp AACACAAGTCTGTCCAGTGTTCCTAAATTTAGATGCCATGGCCCCTaGTACAGCCTGGTCCACGTTGGCACTGTCAAATACTATAAATGG +
Preference number: 1 (lower is better)
Translates to: NTSLSSVPKFRCHGP*YSLVHVGTVKYYKW
Trigger: CCATTTATAGTATTTGACAGTGCCAACGTGGACCAGGCTGTAGCAGGGGCCATGGCATCTAAATTTAGGAACACTGGACAGACTTGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672652.1
3UTR GCA 90 bp TCTTCTTCATGGCCTCGGCGAATGCTTTTACAAAGGCATCATGGATaGCCCTTTGCACCAAGAATTGGTTTGAGCAAACACAAGTCTGTC +
Preference number: 1 (lower is better)
Translates to: SSSWPRRMLLQRHHG*PFAPRIGLSKHKSV
Trigger: GACAGACTTGTGTTTGCTCAAACCAATTCTTGGTGCAAAGGGGCATCCATGATGCCTTTGTAAAAGCATTCGCCGAGGCCATGAAGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672652.1
3UTR CCA 90 bp AGGTTCTTCTTCATGGCCTCGGCGAATGCTTTTACAAAGGCATCATaGATGCCCCTTTGCACCAAGAATTGGTTTGAGCAAACACAAGTC +
Preference number: 1 (lower is better)
Translates to: RFFFMASANAFTKAS*MPLCTKNWFEQTQV
Trigger: GACTTGTGTTTGCTCAAACCAATTCTTGGTGCAAAGGGGCATCCATGATGCCTTTGTAAAAGCATTCGCCGAGGCCATGAAGAAGAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672652.1
3UTR TCA 90 bp TTTAAAGAACCAAAGAATCCTACAAGCCCCCGTAACACACATACTTaGGTTCCAGATACTCATCAATGCCATACTTGGACCCCTCTCGCC +
Preference number: 1 (lower is better)
Translates to: FKEPKNPTSPRNTHT*VPDTHQCHTWTPLA
Trigger: GGCGAGAGGGGTCCAAGTATGGCATTGATGAGTATCTGGAACTCAAGTATGTGTGTTACGGGGGCTTGTAGGATTCTTTGGTTCTTTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672652.1
3UTR GCA 90 bp AAGGAAGGTGCTTCGTCTCCACCTACTTGGCCGCCTAATTGGATTTaGATCTGTTTAAGATTACGGAGTCTTTCTTTCAAAGTGAGAGGC +
Preference number: 1 (lower is better)
Translates to: KEGASSPPTWPPNWI*ICLRLRSLSFKVRG
Trigger: GCCTCTCACTTTGAAAGAAAGACTCCGTAATCTTAAACAGATGCAAATCCAATTAGGCGGCCAAGTAGGTGGAGACGAAGCACCTTCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR CCA 90 bp TGGGGAAAGGAAGGTGCTTCGTCTCCACCTACTTGGCCGCCTAATTaGATTTGCATCTGTTTAAGATTACGGAGTCTTTCTTTCAAAGTG +
Preference number: 1 (lower is better)
Translates to: WGKEGASSPPTWPPN*ICICLRLRSLSFKV
Trigger: CACTTTGAAAGAAAGACTCCGTAATCTTAAACAGATGCAAATCCAATTAGGCGGCCAAGTAGGTGGAGACGAAGCACCTTCCTTTCCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR TCA 90 bp ACGTGGCTAATTTCATGTACATTATCATCGCTGGGAAGTTCCTGCTaGGAACTCACGGTAGCTATGCCAGAAAAGTACTTTCTTCACAGG +
Preference number: 1 (lower is better)
Translates to: TWLISCTLSSLGSSC*ELTVAMPEKYFLHR
Trigger: CCTGTGAAGAAAGTACTTTTCTGGCATAGCTACCGTGAGTTCTCAGCAGGAACTTCCCAGCGATGATAATGTACATGAAATTAGCCACGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR CCA 90 bp AGGTGCCTGAAATTCAAGGGCTCATGCCTCTTCTACAAAGTGGGTTaGCAATTACAGAAATTCTTTCCCTTTTGGGTTGACTGTGGTGAA +
Preference number: 1 (lower is better)
Translates to: RCLKFKGSCLFYKVG*QLQKFFPFWVDCGE
Trigger: TTCACCACAGTCAACCCAAAAGGGAAAGAATTTCTGTAATTGCCAACCCACTTTGTAGAAGAGGCATGAGCCCTTGAATTTCAGGCACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR TCA 90 bp TGTTTCTCCACCTTTTCTACCGCTTTTTCATTAATTAATGGGCCCTaGGTAGTTCCTTCCTCAAATCCATTACCTACGCGCAGGTTCTTC +
Preference number: 1 (lower is better)
Translates to: CFSTFSTAFSLINGP*VVPSSNPLPTRRFF
Trigger: GAAGAACCTGCGCGTAGGTAATGGATTTGAGGAAGGAACTACTCAGGGCCCATTAATTAATGAAAAAGCGGTAGAAAAGGTGGAGAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672652.1
3UTR GCA 90 bp CATCAATTAAAATATGGTTCAGGAATAGGGAGAGGTGCTCCTTCGTaGCTCACAGAAGCACGGACAATTCTGTGCTATTTATTGTCTTTG +
Preference number: 1 (lower is better)
Translates to: HQLKYGSGIGRGAPS*LTEARTILCYLLSL
Trigger: CAAAGACAATAAATAGCACAGAATTGTCCGTGCTTCTGTGAGGCACGAAGGAGCACCTCTCCCTATTCCTGAACCATATTTTAATTGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR GCA 90 bp ACAATAAAGGCATCAATTAAAATATGGTTCAGGAATAGGGAGAGGTaGTCCTTCGTGCCTCACAGAAGCACGGACAATTCTGTGCTATTT +
Preference number: 1 (lower is better)
Translates to: TIKASIKIWFRNRER*SFVPHRSTDNSVLF
Trigger: AAATAGCACAGAATTGTCCGTGCTTCTGTGAGGCACGAAGGAGCACCTCTCCCTATTCCTGAACCATATTTTAATTGATGCCTTTATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR-3UTR TCA 90 bp GCGGAGAAGGGCGTGTCTTCGGCAGGCTTCACCACGACAGTACAGCCGGCTGCCCCCCCACCTTCCGGGTaGTCATGGCACTGGGGAAAT +
Preference number: 2 (lower is better)
Translates to: AEKGVSSAGFTTTVQPAAPPPSG*SWHWGN
Trigger: ATTTCCCCAGTGCCATGATCACCCGGAAGGTGGGGG...GGCAGCCGGCTGTACTGTCGTGGTGAAGCCTGCCGAAGACACGCCCTTCTCCGC
64% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000672557.1
3UTR-3UTR TCA 90 bp GCTCTGGGCCCATGTTCTGTAGCGACATGGGGGATGGTTGTGCCACTGCCCAGGGTGATCAAGCCTTTGTaGCGGCCCATGGGGCTGGGC +
Preference number: 2 (lower is better)
Translates to: ALGPCSVATWGMVVPLPRVIKPL*RPMGLG
Trigger: GCCCAGCCCCATGGGCCGTCACAAAGGCTTGATCAC...CCTGGGCAGTGGCACAACCATCCCCCATGTCGCTACAGAACATGGGCCCAGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR-3UTR GCA 90 bp ACCCCTCTCGCCCAAGGCCGGACTGCTTCACTCCACCAAAAGGGCACTCCACAGGCCTTGTGCTGTGCCTaGTCTGAGGCAGCTGGGGCT +
Preference number: 2 (lower is better)
Translates to: TPLAQGRTASLHQKGTPQALCCA*SEAAGA
Trigger: AGCCCCAGCTGCCTCAGAGCAGGCACAGCACAAGGC...CTGTGGAGTGCCCTTTTGGTGGAGTGAAGCAGTCCGGCCTTGGGCGAGAGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000672652.1
3UTR-3UTR CCA 90 bp TTGGCAAAGCCACTGACAGTAGGCAAGGAAGGGCTGGGCGGTGCTGCTCGTAACGACGGCCCATGGGGCTaGGCCTGCCTTGTGCTGTGC +
Preference number: 2 (lower is better)
Translates to: LAKPLTVGKEGLGGAARNDGPWG*ACLVLC
Trigger: GCACAGCACAAGGCAGGCCCAGCCCCATGGGCCGTC...GTTACGAGCAGCACCGCCCAGCCCTTCCTTGCCTACTGTCAGTGGCTTTGCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR CAA 90 bp GGGAAATTCCACGGGGTGATGACTGCAGCCACGCCTATGGGCTGCTaGAGGACCAGGGCCCGCCTGTCCTTTGCCGGGGTGTGGATAATG +
Preference number: 2 (lower is better)
Translates to: GKFHGVMTAATPMGC*RTRARLSFAGVWIM
Trigger: CATTATCCACACCCCGGCAAAGGACAGGCGGGCCCTGGTCCTCAAGCAGCCCATAGGCGTGGCTGCAGTCATCACCCCGTGGAATTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672557.1
3UTR-3UTR TCA 90 bp TTGTGCCACTGCCCAGGCAGTGATCAAGCCTTTGTGACGGCCCATGGGGCTGGGCCACTGCCCAGGCAGTaGTCAAGCCTTTGTGACGGC +
Preference number: 2 (lower is better)
Translates to: LCHCPGSDQAFVTAHGAGPLPRQ*SSLCDG
Trigger: GCCGTCACAAAGGCTTGATCACTGCCTGGGCAGTGG...CCCAGCCCCATGGGCCGTCACAAAGGCTTGATCACTGCCTGGGCAGTGGCACAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR-3UTR GCA 90 bp TCTGGGCCCATGTTCTGTAGCGACATGGGGGATGGTTGTGCCACTGCCCAGGCAGCTGGGCCTGCCTTGTaGTGTGCCTGCTCTGAGGCA +
Preference number: 2 (lower is better)
Translates to: SGPMFCSDMGDGCATAQAAGPAL*CACSEA
Trigger: TGCCTCAGAGCAGGCACAGCACAAGGCAGGCCCAGC...TGCCTGGGCAGTGGCACAACCATCCCCCATGTCGCTACAGAACATGGGCCCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR-3UTR GCA 90 bp CAAGGTGCTCTGGGCCCATGTTCTGTAGCGACATGGGGGATGGTTGTGCCACTGCCATGGGGCTGGGCCTaGCTTGTGCTGTGCCTGCTC +
Preference number: 2 (lower is better)
Translates to: QGALGPCSVATWGMVVPLPWGWA*LVLCLL
Trigger: GAGCAGGCACAGCACAAGGCAGGCCCAGCCCCATGG...CAGTGGCACAACCATCCCCCATGTCGCTACAGAACATGGGCCCAGAGCACCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR-3UTR GCA 90 bp CAAGGTGCTCTGGGCCCATGTTCTGTAGCGACATGGGGGATGGTTGTGCCACTGGCTGGGCCTGCCTTGTaGTGTGCCTGCTCTGAGGCA +
Preference number: 2 (lower is better)
Translates to: QGALGPCSVATWGMVVPLAGPAL*CACSEA
Trigger: TGCCTCAGAGCAGGCACAGCACAAGGCAGGCCCAGC...CAGTGGCACAACCATCCCCCATGTCGCTACAGAACATGGGCCCAGAGCACCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR-3UTR GCA 90 bp CGCAACACCTCCAGATGCACATTCGGTGTCTTCTGTGCTGAGCTGGCAGATGCCCCATGGGGCTGGGCCTaGCTTGTGCTGTGCCTGCTC +
Preference number: 2 (lower is better)
Translates to: RNTSRCTFGVFCAELADAPWGWA*LVLCLL
Trigger: GAGCAGGCACAGCACAAGGCAGGCCCAGCCCCATGG...GGCATCTGCCAGCTCAGCACAGAAGACACCGAATGTGCATCTGGAGGTGTTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR-3UTR CCA 90 bp GACAGTACAGCCGGCTGCCAGGGCGGCCCCCACCTTCCGGGTGATCATGGCACTATGTGCCTCCTTCAGTaGCTTTCCCCTGGCACAATA +
Preference number: 2 (lower is better)
Translates to: DSTAGCQGGPHLPGDHGTMCLLQ*LSPGTI
Trigger: TATTGTGCCAGGGGAAAGCCACTGAAGGAGGCACAT...AGTGCCATGATCACCCGGAAGGTGGGGGCCGCCCTGGCAGCCGGCTGTACTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672557.1
3UTR-3UTR GCA 90 bp CGCAACACCTCCAGATGCACATTCGGTGTCTTCTGTGCTGAGCTGGCAGATGCCGCCTTGTGCTGTGCCTaGTCTGAGGCAGCTGGGGCT +
Preference number: 2 (lower is better)
Translates to: RNTSRCTFGVFCAELADAALCCA*SEAAGA
Trigger: AGCCCCAGCTGCCTCAGAGCAGGCACAGCACAAGGC...GGCATCTGCCAGCTCAGCACAGAAGACACCGAATGTGCATCTGGAGGTGTTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR-3UTR GCA 90 bp TTGGCAAAGCCACTGACAGTAGGCAAGGAAGGGCTGGGCGGTGCTGCTCGTAACGAAGGAGCCAGGCCATaGCACTGCGTGCCTTCCATC +
Preference number: 2 (lower is better)
Translates to: LAKPLTVGKEGLGGAARNEGARP*HCVPSI
Trigger: GATGGAAGGCACGCAGTGGCATGGCCTGGCTCCTTC...GTTACGAGCAGCACCGCCCAGCCCTTCCTTGCCTACTGTCAGTGGCTTTGCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR-3UTR CCA 90 bp CGCAACACCTCCAGATGCACATTCGGTGTCTTCTGTGCTGAGCTGGCAGATGCCCTTTGTGACGGCCCATaGGGCTGGGCCTGCCTTGTG +
Preference number: 2 (lower is better)
Translates to: RNTSRCTFGVFCAELADALCDGP*GWACLV
Trigger: CACAAGGCAGGCCCAGCCCCATGGGCCGTCACAAAG...GGCATCTGCCAGCTCAGCACAGAAGACACCGAATGTGCATCTGGAGGTGTTGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR-3UTR TCA 90 bp TCAAACCTCTGCCGCAACACCTCCAGATGCACATTCGGTGTCTTCTGTGCTGAGGTGCTGTGCCTGCTCTaGGGCAGCTGGGGCTGTGGT +
Preference number: 2 (lower is better)
Translates to: SNLCRNTSRCTFGVFCAEVLCLL*GSWGCG
Trigger: ACCACAGCCCCAGCTGCCTCAGAGCAGGCACAGCAC...CTCAGCACAGAAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGAGGTTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR-3UTR GCA 90 bp TTGTGCCACTGCCCAGGCAGTGATCAAGCCTTTGTGACGGCCCATGGGGCTGGGGTTCACTCAAACCTCTaGCGCAACACCTCCAGATGC +
Preference number: 2 (lower is better)
Translates to: LCHCPGSDQAFVTAHGAGVHSNL*RNTSRC
Trigger: GCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAAC...CCCAGCCCCATGGGCCGTCACAAAGGCTTGATCACTGCCTGGGCAGTGGCACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR-3UTR GCA 90 bp ACCTTGGGAATGTGGCTAGTACACTCCAGGCCAGATGCTAGGCAGCTCCCTGTGGCCAGGCCATGCCACTaGGTGCCTTCCATCCTACCA +
Preference number: 2 (lower is better)
Translates to: TLGMWLVHSRPDARQLPVARPCH*VPSILP
Trigger: TGGTAGGATGGAAGGCACGCAGTGGCATGGCCTGGC...CACAGGGAGCTGCCTAGCATCTGGCCTGGAGTGTACTAGCCACATTCCCAAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR-3UTR GCA 90 bp ACCTTGGGAATGTGGCTAGTACACTCCAGGCCAGATGCTAGGCAGCTCCCTGTGGAAGGAGCCAGGCCATaGCACTGCGTGCCTTCCATC +
Preference number: 2 (lower is better)
Translates to: TLGMWLVHSRPDARQLPVEGARP*HCVPSI
Trigger: GATGGAAGGCACGCAGTGGCATGGCCTGGCTCCTTC...CACAGGGAGCTGCCTAGCATCTGGCCTGGAGTGTACTAGCCACATTCCCAAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR-3UTR TCA 90 bp TCAAACCTCTGCCGCAACACCTCCAGATGCACATTCGGTGTCTTCTGTGCTGAGGTGATCAAGCCTTTGTaGCGGCCCATGGGGCTGGGC +
Preference number: 2 (lower is better)
Translates to: SNLCRNTSRCTFGVFCAEVIKPL*RPMGLG
Trigger: GCCCAGCCCCATGGGCCGTCACAAAGGCTTGATCAC...CTCAGCACAGAAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGAGGTTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR-3UTR GCA 90 bp TCAAACCTCTGCCGCAACACCTCCAGATGCACATTCGGTGTCTTCTGTGCTGAGGCCTTGTGCTGTGCCTaGTCTGAGGCAGCTGGGGCT +
Preference number: 2 (lower is better)
Translates to: SNLCRNTSRCTFGVFCAEALCCA*SEAAGA
Trigger: AGCCCCAGCTGCCTCAGAGCAGGCACAGCACAAGGC...CTCAGCACAGAAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGAGGTTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR-3UTR GCA 90 bp GGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGCACATTCGGTGTCTTCTGCTGGGCCTGCCTTGTaGTGTGCCTGCTCTGAGGCA +
Preference number: 2 (lower is better)
Translates to: GFTQTSAATPPDAHSVSSAGPAL*CACSEA
Trigger: TGCCTCAGAGCAGGCACAGCACAAGGCAGGCCCAGC...AGAAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR-3UTR GCA 90 bp CGCAACACCTCCAGATGCACATTCGGTGTCTTCTGTGCTGAGCTGGCAGATGCCGGATGGTTGTGCCACTaGCCAGGCAGTGATCAAGCC +
Preference number: 2 (lower is better)
Translates to: RNTSRCTFGVFCAELADAGWLCH*PGSDQA
Trigger: GGCTTGATCACTGCCTGGGCAGTGGCACAACCATCC...GGCATCTGCCAGCTCAGCACAGAAGACACCGAATGTGCATCTGGAGGTGTTGCG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR-3UTR GCA 90 bp TTGGCAAAGCCACTGACAGTAGGCAAGGAAGGGCTGGGCGGTGCTGCTCGTAACAGAGGTGCTCCTTCGTaGCTCACAGAAGCACGGACA +
Preference number: 2 (lower is better)
Translates to: LAKPLTVGKEGLGGAARNRGAPS*LTEART
Trigger: TGTCCGTGCTTCTGTGAGGCACGAAGGAGCACCTCT...GTTACGAGCAGCACCGCCCAGCCCTTCCTTGCCTACTGTCAGTGGCTTTGCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR-3UTR TCA 90 bp TCAAACCTCTGCCGCAACACCTCCAGATGCACATTCGGTGTCTTCTGTGCTGAGCCACTGCCCAGGCAGTaGTCAAGCCTTTGTGACGGC +
Preference number: 2 (lower is better)
Translates to: SNLCRNTSRCTFGVFCAEPLPRQ*SSLCDG
Trigger: GCCGTCACAAAGGCTTGATCACTGCCTGGGCAGTGG...CTCAGCACAGAAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGAGGTTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR-3UTR GCA 90 bp GGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGCACATTCGGTGTCTTCTGGTTCTCTGGGAGTCTaGAGCCACAGGCACGTGGCA +
Preference number: 2 (lower is better)
Translates to: GFTQTSAATPPDAHSVSSGSLGV*SHRHVA
Trigger: TGCCACGTGCCTGTGGCTGCAGACTCCCAGAGAACC...AGAAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR-3UTR CCA 90 bp ATTGTCTTTGAAAGAGGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGCAGACGGCCCATGGGGCTaGGCCTGCCTTGTGCTGTGC +
Preference number: 2 (lower is better)
Translates to: IVFERGFTQTSAATPPDADGPWG*ACLVLC
Trigger: GCACAGCACAAGGCAGGCCCAGCCCCATGGGCCGTC...TGCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCCTCTTTCAAAGACAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR-3UTR TCA 90 bp GTGATTCTTGACAGGGCCGGGGCACTGTCACTAGGAGATGAATTTCAGCTCTTCCCACTGCCCAGGCAGTaGTCAAGCCTTTGTGACGGC +
Preference number: 2 (lower is better)
Translates to: VILDRAGALSLGDEFQLFPLPRQ*SSLCDG
Trigger: GCCGTCACAAAGGCTTGATCACTGCCTGGGCAGTGG...GAAGAGCTGAAATTCATCTCCTAGTGACAGTGCCCCGGCCCTGTCAAGAATCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR-3UTR GCA 90 bp CAGGCACGTGGCACATATTGGTCCCTAGTTACATTAAGGGCAGGGGTAGGATTTGCCTTGTGCTGTGCCTaGTCTGAGGCAGCTGGGGCT +
Preference number: 2 (lower is better)
Translates to: QARGTYWSLVTLRAGVGFALCCA*SEAAGA
Trigger: AGCCCCAGCTGCCTCAGAGCAGGCACAGCACAAGGC...AAATCCTACCCCTGCCCTTAATGTAACTAGGGACCAATATGTGCCACGTGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR-3UTR GCA 90 bp AGGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGCACATTCGGTGTCTTCAGATGCCATGGCCCCTaGTACAGCCTGGTCCACGTT +
Preference number: 2 (lower is better)
Translates to: RVHSNLCRNTSRCTFGVFRCHGP*YSLVHV
Trigger: AACGTGGACCAGGCTGTAGCAGGGGCCATGGCATCT...GAAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672652.1
3UTR-3UTR CCA 90 bp GATCAGTACAAATTGCCTCCCCTACTTCCTTGGCATTCTTTCGAGAACAGGGAAGACGGCCCATGGGGCTaGGCCTGCCTTGTGCTGTGC +
Preference number: 2 (lower is better)
Translates to: DQYKLPPLLPWHSFENREDGPWG*ACLVLC
Trigger: GCACAGCACAAGGCAGGCCCAGCCCCATGGGCCGTC...TTCCCTGTTCTCGAAAGAATGCCAAGGAAGTAGGGGAGGCAATTTGTACTGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672652.1
3UTR-3UTR CCA 90 bp TTGGCAAAGCCACTGACAGTAGGCAAGGAAGGGCTGGGCGGTGCTGCTCGTAACCCTCCCCTACTTCCTTaGCATTCTTTCGAGAACAGG +
Preference number: 2 (lower is better)
Translates to: LAKPLTVGKEGLGGAARNPPLLP*HSFENR
Trigger: CCTGTTCTCGAAAGAATGCCAAGGAAGTAGGGGAGG...GTTACGAGCAGCACCGCCCAGCCCTTCCTTGCCTACTGTCAGTGGCTTTGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672652.1
3UTR-3UTR GCA 90 bp GATCAGTACAAATTGCCTCCCCTACTTCCTTGGCATTCTTTCGAGAACAGGGAACCATGGGGCTGGGCCTaGCTTGTGCTGTGCCTGCTC +
Preference number: 2 (lower is better)
Translates to: DQYKLPPLLPWHSFENREPWGWA*LVLCLL
Trigger: GAGCAGGCACAGCACAAGGCAGGCCCAGCCCCATGG...TTCCCTGTTCTCGAAAGAATGCCAAGGAAGTAGGGGAGGCAATTTGTACTGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672652.1
3UTR-3UTR GCA 90 bp TTCACTCAAACCTCTGCCGCAACACCTCCAGATGCACATTCGGTGTCTTCTGTGCATGGGGGATGGTTGTaGCACTGCCCAGGCAGTGAT +
Preference number: 2 (lower is better)
Translates to: FTQTSAATPPDAHSVSSVHGGWL*HCPGSD
Trigger: ATCACTGCCTGGGCAGTGGCACAACCATCCCCCATG...CACAGAAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR-3UTR GCA 90 bp CAGGCACGTGGCACATATTGGTCCCTAGTTACATTAAGGGCAGGGGTAGGATTTGAAGGAGCCAGGCCATaGCACTGCGTGCCTTCCATC +
Preference number: 2 (lower is better)
Translates to: QARGTYWSLVTLRAGVGFEGARP*HCVPSI
Trigger: GATGGAAGGCACGCAGTGGCATGGCCTGGCTCCTTC...AAATCCTACCCCTGCCCTTAATGTAACTAGGGACCAATATGTGCCACGTGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR-3UTR CCA 90 bp ATTGTCTTTGAAAGAGGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGCACTTTGTGACGGCCCATaGGGCTGGGCCTGCCTTGTG +
Preference number: 2 (lower is better)
Translates to: IVFERGFTQTSAATPPDALCDGP*GWACLV
Trigger: CACAAGGCAGGCCCAGCCCCATGGGCCGTCACAAAG...TGCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCCTCTTTCAAAGACAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR-3UTR CCA 90 bp AGGATCAGTACAAATTGCCTCCCCTACTTCCTTGGCATTCTTTCGAGAACAGGGCTTTGTGACGGCCCATaGGGCTGGGCCTGCCTTGTG +
Preference number: 2 (lower is better)
Translates to: RISTNCLPYFLGILSRTGLCDGP*GWACLV
Trigger: CACAAGGCAGGCCCAGCCCCATGGGCCGTCACAAAG...CCCTGTTCTCGAAAGAATGCCAAGGAAGTAGGGGAGGCAATTTGTACTGATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672652.1
3UTR-3UTR CCA 90 bp ACCTTGGGAATGTGGCTAGTACACTCCAGGCCAGATGCTAGGCAGCTCCCTGTGTCGTCTCCACCTACTTaGCCGCCTAATTGGATTTGC +
Preference number: 2 (lower is better)
Translates to: TLGMWLVHSRPDARQLPVSSPPT*PPNWIC
Trigger: GCAAATCCAATTAGGCGGCCAAGTAGGTGGAGACGA...CACAGGGAGCTGCCTAGCATCTGGCCTGGAGTGTACTAGCCACATTCCCAAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR CAA 90 bp GTGCTGGTTCTCTGGGAGTCTGCAGCCACAGGCACGTGGCACATATaGGTCCCTAGTTACATTAAGGGCAGGGGTAGGATTTGCATCTGT +
Preference number: 2 (lower is better)
Translates to: VLVLWESAATGTWHI*VPSYIKGRGRICIC
Trigger: ACAGATGCAAATCCTACCCCTGCCCTTAATGTAACTAGGGACCAATATGTGCCACGTGCCTGTGGCTGCAGACTCCCAGAGAACCAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR CAA 90 bp TTCACTCCACCAAAAGGGCACTCCACAGAGGAAATTAATCCTTCGTaGACGCCAACCATGCCCACTTCCAGCTGCTCTGCCACTCTCCAG +
Preference number: 2 (lower is better)
Translates to: FTPPKGHSTEEINPS*TPTMPTSSCSATLQ
Trigger: CTGGAGAGTGGCAGAGCAGCTGGAAGTGGGCATGGTTGGCGTCAACGAAGGATTAATTTCCTCTGTGGAGTGCCCTTTTGGTGGAGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672652.1
3UTR-3UTR TCA 90 bp TTTATTGTCTTTGAAAGAGGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGTGCTGTGCCTGCTCTaGGGCAGCTGGGGCTGTGGT +
Preference number: 2 (lower is better)
Translates to: FIVFERGFTQTSAATPPDVLCLL*GSWGCG
Trigger: ACCACAGCCCCAGCTGCCTCAGAGCAGGCACAGCAC...ATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCCTCTTTCAAAGACAATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR-3UTR GCA 90 bp TTTATTGTCTTTGAAAGAGGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATCCATGGGGCTGGGCCTaGCTTGTGCTGTGCCTGCTC +
Preference number: 2 (lower is better)
Translates to: FIVFERGFTQTSAATPPDPWGWA*LVLCLL
Trigger: GAGCAGGCACAGCACAAGGCAGGCCCAGCCCCATGG...ATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCCTCTTTCAAAGACAATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR-3UTR GCA 90 bp ATTGCCTCCCCTACTTCCTTGGCATTCTTTCGAGAACAGGGAATAACATTGTATGCCACGCCTATGGGCTaGTTGAGGACCAGGGCCCGC +
Preference number: 2 (lower is better)
Translates to: IASPTSLAFFREQGITLYATPMG*LRTRAR
Trigger: GCGGGCCCTGGTCCTCAAGCAGCCCATAGGCGTGGC...ATACAATGTTATTCCCTGTTCTCGAAAGAATGCCAAGGAAGTAGGGGAGGCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672557.1
3UTR-3UTR GCA 90 bp TCCCCTACTTCCTTGGCATTCTTTCGAGAACAGGGAATAACATTGTATACACCTGACAGTACAGCCGGCTaGCAGGGCGGCCCCCACCTT +
Preference number: 2 (lower is better)
Translates to: SPTSLAFFREQGITLYTPDSTAG*QGGPHL
Trigger: AAGGTGGGGGCCGCCCTGGCAGCCGGCTGTACTGTC...AGGTGTATACAATGTTATTCCCTGTTCTCGAAAGAATGCCAAGGAAGTAGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672557.1
3UTR-3UTR GCA 90 bp ACCTTGGGAATGTGGCTAGTACACTCCAGGCCAGATGCTAGGCAGCTCCCTGTGGTTCCTAAATTTAGATaGCATGGCCCCTGCTACAGC +
Preference number: 2 (lower is better)
Translates to: TLGMWLVHSRPDARQLPVVPKFR*HGPCYS
Trigger: GCTGTAGCAGGGGCCATGGCATCTAAATTTAGGAAC...CACAGGGAGCTGCCTAGCATCTGGCCTGGAGTGTACTAGCCACATTCCCAAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672652.1
3UTR-3UTR GCA 90 bp GTGATTCTTGACAGGGCCGGGGCACTGTCACTAGGAGATGAATTTCAGCTCTTCATGCCCACTTCCAGCTaGTCTGCCACTCTCCAGATC +
Preference number: 2 (lower is better)
Translates to: VILDRAGALSLGDEFQLFMPTSS*SATLQI
Trigger: GATCTGGAGAGTGGCAGAGCAGCTGGAAGTGGGCAT...GAAGAGCTGAAATTCATCTCCTAGTGACAGTGCCCCGGCCCTGTCAAGAATCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672652.1
3UTR-3UTR CCA 90 bp CCACAACCCAGAATAACCACAAGATGTAAGTGGAGTCTACACAGACAGAGATGGAGGTCGGTGGGCAAGTaGGCACTGGCCTCCTCCCAT +
Preference number: 2 (lower is better)
Translates to: PQPRITTRCKWSLHRQRWRSVGK*ALASSH
Trigger: ATGGGAGGAGGCCAGTGCCCACTTGCCCACCGACCT...CCATCTCTGTCTGTGTAGACTCCACTTACATCTTGTGGTTATTCTGGGTTGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR-3UTR CCA 90 bp AAGTGGAGTCTACACAGACAGAGATGGGGAAAGGAAGGTGCTTCGTCTCCACCTCATCAATGCCATACTTaGACCCCTCTCGCCCAAGGC +
Preference number: 2 (lower is better)
Translates to: KWSLHRQRWGKEGASSPPHQCHT*TPLAQG
Trigger: GCCTTGGGCGAGAGGGGTCCAAGTATGGCATTGATG...AGGTGGAGACGAAGCACCTTCCTTTCCCCATCTCTGTCTGTGTAGACTCCACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672652.1
3UTR CAA 90 bp CTGTCACTAGGAGATGAATTTCAGCTCTTCCTTCTCCTTGGGACCTaGGGAATGTGGCTAGTACACTCCAGGCCAGATGCTAGGCAGCTC +
Preference number: 2 (lower is better)
Translates to: LSLGDEFQLFLLLGT*GMWLVHSRPDARQL
Trigger: GAGCTGCCTAGCATCTGGCCTGGAGTGTACTAGCCACATTCCCAAGGTCCCAAGGAGAAGGAAGAGCTGAAATTCATCTCCTAGTGACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR CAA 90 bp TTCCTAAATTTAGATGCCATGGCCCCTGCTACAGCCTGGTCCACGTaGGCACTGTCAAATACTATAAATGGAGCAAGGCCGCCCAGCTCC +
Preference number: 2 (lower is better)
Translates to: FLNLDAMAPATAWST*ALSNTINGARPPSS
Trigger: GGAGCTGGGCGGCCTTGCTCCATTTATAGTATTTGACAGTGCCAACGTGGACCAGGCTGTAGCAGGGGCCATGGCATCTAAATTTAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672652.1
3UTR-3UTR TCA 90 bp CCATCCTACCAAGCTGCTTCTGCTATTCTTTGCTTTACACTTCAGCTCATTTACGTGCTGTGCCTGCTCTaGGGCAGCTGGGGCTGTGGT +
Preference number: 2 (lower is better)
Translates to: PSYQAASAILCFTLQLIYVLCLL*GSWGCG
Trigger: ACCACAGCCCCAGCTGCCTCAGAGCAGGCACAGCAC...GTAAATGAGCTGAAGTGTAAAGCAAAGAATAGCAGAAGCAGCTTGGTAGGATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR-3UTR TCA 90 bp GTGCTATTTATTGTCTTTGAAAGAGGGTTCACTCAAACCTCTGCCGCAACACCTCGGTGTCTTCTGTGCTaGGCTGGCAGATGCCGGGGA +
Preference number: 2 (lower is better)
Translates to: VLFIVFERGFTQTSAATPRCLLC*AGRCRG
Trigger: TCCCCGGCATCTGCCAGCTCAGCACAGAAGACACCG...AGGTGTTGCGGCAGAGGTTTGAGTGAACCCTCTTTCAAAGACAATAAATAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR-3UTR TCA 90 bp ATCGCTGGGAAGTTCCTGCTGAGAACTCACGGTAGCTATGCCAGAAAAGTACTTGATCTCCTGATGTCGTaGTCTGCCTGCCTTGGCCTC +
Preference number: 2 (lower is better)
Translates to: IAGKFLLRTHGSYARKVLDLLMS*SACLGL
Trigger: GAGGCCAAGGCAGGCAGATCACGACATCAGGAGATC...AAGTACTTTTCTGGCATAGCTACCGTGAGTTCTCAGCAGGAACTTCCCAGCGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR-3UTR TCA 90 bp AAGTGGAGTCTACACAGACAGAGATGGGGAAAGGAAGGTGCTTCGTCTCCACCTCCGAAAGTCTCTTCATaGGTGCACAGCATGTCCTGG +
Preference number: 2 (lower is better)
Translates to: KWSLHRQRWGKEGASSPPPKVSS*VHSMSW
Trigger: CCAGGACATGCTGTGCACTCATGAAGAGACTTTCGG...AGGTGGAGACGAAGCACCTTCCTTTCCCCATCTCTGTCTGTGTAGACTCCACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672652.1
3UTR-3UTR GCA 90 bp GGATGGTTGTGCCACTGCCCAGGCAGTGATCAAGCCTTTGTGACGGCCCATGGGGGCAGGGGTAGGATTTaGATCTGTTTAAGATTACAA +
Preference number: 2 (lower is better)
Translates to: GWLCHCPGSDQAFVTAHGGRGRI*ICLRLQ
Trigger: TTGTAATCTTAAACAGATGCAAATCCTACCCCTGCC...CCCATGGGCCGTCACAAAGGCTTGATCACTGCCTGGGCAGTGGCACAACCATCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR-3UTR GCA 90 bp TTTATTGTCTTTGAAAGAGGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGCTGGGCCTGCCTTGTaGTGTGCCTGCTCTGAGGCA +
Preference number: 2 (lower is better)
Translates to: FIVFERGFTQTSAATPPDAGPAL*CACSEA
Trigger: TGCCTCAGAGCAGGCACAGCACAAGGCAGGCCCAGC...ATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCCTCTTTCAAAGACAATAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR-3UTR CCA 90 bp ACCTTGGGAATGTGGCTAGTACACTCCAGGCCAGATGCTAGGCAGCTCCCTGTGGCACGTGGCACATATTaGTCCCTAGTTACATTAAGG +
Preference number: 2 (lower is better)
Translates to: TLGMWLVHSRPDARQLPVARGTY*SLVTLR
Trigger: CCTTAATGTAACTAGGGACCAATATGTGCCACGTGC...CACAGGGAGCTGCCTAGCATCTGGCCTGGAGTGTACTAGCCACATTCCCAAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR-3UTR CCA 90 bp TTCCTTCCACAACCCAGAATAACCACAAGATGTAAGTGGAGTCTACACAGACAGAGGTCGGTGGGCAAGTaGGCACTGGCCTCCTCCCAT +
Preference number: 2 (lower is better)
Translates to: FLPQPRITTRCKWSLHRQRSVGK*ALASSH
Trigger: ATGGGAGGAGGCCAGTGCCCACTTGCCCACCGACCT...CTGTCTGTGTAGACTCCACTTACATCTTGTGGTTATTCTGGGTTGTGGAAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR-3UTR CCA 90 bp AAGTTCCTGCTGAGAACTCACGGTAGCTATGCCAGAAAAGTACTTTCTTCACAGTCAGGCTCAGGTCGGTaGGCAAGTGGGCACTGGCCT +
Preference number: 2 (lower is better)
Translates to: KFLLRTHGSYARKVLSSQSGSGR*ASGHWP
Trigger: AGGCCAGTGCCCACTTGCCCACCGACCTGAGCCTGA...CTGTGAAGAAAGTACTTTTCTGGCATAGCTACCGTGAGTTCTCAGCAGGAACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR-3UTR CCA 90 bp CCACAACCCAGAATAACCACAAGATGTAAGTGGAGTCTACACAGACAGAGATGGGCCCCTGCTACAGCCTaGTCCACGTTGGCACTGTCA +
Preference number: 2 (lower is better)
Translates to: PQPRITTRCKWSLHRQRWAPATA*STLALS
Trigger: TGACAGTGCCAACGTGGACCAGGCTGTAGCAGGGGC...CCATCTCTGTCTGTGTAGACTCCACTTACATCTTGTGGTTATTCTGGGTTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672652.1
3UTR CAA 90 bp GCCTCCCCTACTTCCTTGGCATTCTTTCGAGAACAGGGAATAACATaGTATACACCTGAAGGAATCCCAGCCTGGCTTGCAAGCTCAGCC +
Preference number: 2 (lower is better)
Translates to: ASPTSLAFFREQGIT*YTPEGIPAWLASSA
Trigger: GGCTGAGCTTGCAAGCCAGGCTGGGATTCCTTCAGGTGTATACAATGTTATTCCCTGTTCTCGAAAGAATGCCAAGGAAGTAGGGGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672557.1
3UTR-3UTR GCA 90 bp AAGTGGAGTCTACACAGACAGAGATGGGGAAAGGAAGGTGCTTCGTCTCCACCTCGCAACACCTCCAGATaGACATTCGGTGTCTTCTGT +
Preference number: 2 (lower is better)
Translates to: KWSLHRQRWGKEGASSPPRNTSR*TFGVFC
Trigger: ACAGAAGACACCGAATGTGCATCTGGAGGTGTTGCG...AGGTGGAGACGAAGCACCTTCCTTTCCCCATCTCTGTCTGTGTAGACTCCACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR-3UTR GCA 90 bp AAGTTCCTGCTGAGAACTCACGGTAGCTATGCCAGAAAAGTACTTTCTTCACAGGCCAGGCCATGCCACTaGGTGCCTTCCATCCTACCA +
Preference number: 2 (lower is better)
Translates to: KFLLRTHGSYARKVLSSQARPCH*VPSILP
Trigger: TGGTAGGATGGAAGGCACGCAGTGGCATGGCCTGGC...CTGTGAAGAAAGTACTTTTCTGGCATAGCTACCGTGAGTTCTCAGCAGGAACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR-3UTR GCA 90 bp AGGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGCACATTCGGTGTCTTCCATGGCCTCGGCGAATaGTTTTACAAAGGCATCATG +
Preference number: 2 (lower is better)
Translates to: RVHSNLCRNTSRCTFGVFHGLGE*FYKGIM
Trigger: CATGATGCCTTTGTAAAAGCATTCGCCGAGGCCATG...GAAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672652.1
3UTR-3UTR TCA 90 bp AATTCAAGGGCTCATGCCTCTTCTACAAAGTGGGTTGGCAATTACAGAAATTCTCGGTGTCTTCTGTGCTaGGCTGGCAGATGCCGGGGA +
Preference number: 2 (lower is better)
Translates to: NSRAHASSTKWVGNYRNSRCLLC*AGRCRG
Trigger: TCCCCGGCATCTGCCAGCTCAGCACAGAAGACACCG...AGAATTTCTGTAATTGCCAACCCACTTTGTAGAAGAGGCATGAGCCCTTGAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR-3UTR GCA 90 bp GTGCTATTTATTGTCTTTGAAAGAGGGTTCACTCAAACCTCTGCCGCAACACCTGGATGGTTGTGCCACTaGCCAGGCAGTGATCAAGCC +
Preference number: 2 (lower is better)
Translates to: VLFIVFERGFTQTSAATPGWLCH*PGSDQA
Trigger: GGCTTGATCACTGCCTGGGCAGTGGCACAACCATCC...AGGTGTTGCGGCAGAGGTTTGAGTGAACCCTCTTTCAAAGACAATAAATAGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR-3UTR GCA 90 bp TCAGTACAAATTGCCTCCCCTACTTCCTTGGCATTCTTTCGAGAACAGGGAATACATGGGGGATGGTTGTaGCACTGCCCAGGCAGTGAT +
Preference number: 2 (lower is better)
Translates to: SVQIASPTSLAFFREQGIHGGWL*HCPGSD
Trigger: ATCACTGCCTGGGCAGTGGCACAACCATCCCCCATG...TATTCCCTGTTCTCGAAAGAATGCCAAGGAAGTAGGGGAGGCAATTTGTACTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672652.1
3UTR-3UTR CCA 90 bp GGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGCACATTCGGTGTCTTCTGCACGTGGCACATATTaGTCCCTAGTTACATTAAGG +
Preference number: 2 (lower is better)
Translates to: GFTQTSAATPPDAHSVSSARGTY*SLVTLR
Trigger: CCTTAATGTAACTAGGGACCAATATGTGCCACGTGC...AGAAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR-3UTR CCA 90 bp GTTAGCGATTGCTATAGCCTCCTCCTCTGTATCGAACTTGATAACTGGTGCCAGTGTTCTGTAGCGACATaGGGGATGGTTGTGCCACTG +
Preference number: 2 (lower is better)
Translates to: VSDCYSLLLCIELDNWCQCSVAT*GMVVPL
Trigger: CAGTGGCACAACCATCCCCCATGTCGCTACAGAACA...CTGGCACCAGTTATCAAGTTCGATACAGAGGAGGAGGCTATAGCAATCGCTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672652.1
3UTR CAA 90 bp GCTCCTTCGTGCCTCACAGAAGCACGGACAATTCTGTGCTATTTATaGTCTTTGAAAGAGGGTTCACTCAAACCTCTGCCGCAACACCTC +
Preference number: 2 (lower is better)
Translates to: APSCLTEARTILCYL*SLKEGSLKPLPQHL
Trigger: GAGGTGTTGCGGCAGAGGTTTGAGTGAACCCTCTTTCAAAGACAATAAATAGCACAGAATTGTCCGTGCTTCTGTGAGGCACGAAGGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR-3UTR TCA 90 bp AAGTTCCTGCTGAGAACTCACGGTAGCTATGCCAGAAAAGTACTTTCTTCACAGTTGCTCTTTTGGAGGTaGGGGAGCAGCACCACACCA +
Preference number: 2 (lower is better)
Translates to: KFLLRTHGSYARKVLSSQLLFWR*GSSTTP
Trigger: TGGTGTGGTGCTGCTCCCTCACCTCCAAAAGAGCAA...CTGTGAAGAAAGTACTTTTCTGGCATAGCTACCGTGAGTTCTCAGCAGGAACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR-3UTR TCA 90 bp ATCGCTGGGAAGTTCCTGCTGAGAACTCACGGTAGCTATGCCAGAAAAGTACTTAAAATGCTGAGTATGTaGTTCTTGACAGGGCCGGGG +
Preference number: 2 (lower is better)
Translates to: IAGKFLLRTHGSYARKVLKMLSM*FLTGPG
Trigger: CCCCGGCCCTGTCAAGAATCACATACTCAGCATTTT...AAGTACTTTTCTGGCATAGCTACCGTGAGTTCTCAGCAGGAACTTCCCAGCGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR-3UTR GCA 90 bp CCATCCTACCAAGCTGCTTCTGCTATTCTTTGCTTTACACTTCAGCTCATTTACGGCCATGCCACTGCGTaGCTTCCATCCTACCAAGCT +
Preference number: 2 (lower is better)
Translates to: PSYQAASAILCFTLQLIYGHATA*LPSYQA
Trigger: AGCTTGGTAGGATGGAAGGCACGCAGTGGCATGGCC...GTAAATGAGCTGAAGTGTAAAGCAAAGAATAGCAGAAGCAGCTTGGTAGGATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR-3UTR GCA 90 bp AATTCAAGGGCTCATGCCTCTTCTACAAAGTGGGTTGGCAATTACAGAAATTCTGCCAGGCCATGCCACTaGGTGCCTTCCATCCTACCA +
Preference number: 2 (lower is better)
Translates to: NSRAHASSTKWVGNYRNSARPCH*VPSILP
Trigger: TGGTAGGATGGAAGGCACGCAGTGGCATGGCCTGGC...AGAATTTCTGTAATTGCCAACCCACTTTGTAGAAGAGGCATGAGCCCTTGAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR-3UTR GCA 90 bp ACCTTGGGAATGTGGCTAGTACACTCCAGGCCAGATGCTAGGCAGCTCCCTGTGTCATTAGATAAAAGGTaGCTGAAATTCAAGGGCTCA +
Preference number: 2 (lower is better)
Translates to: TLGMWLVHSRPDARQLPVSLDKR*LKFKGS
Trigger: TGAGCCCTTGAATTTCAGGCACCTTTTATCTAATGA...CACAGGGAGCTGCCTAGCATCTGGCCTGGAGTGTACTAGCCACATTCCCAAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR-3UTR GCA 90 bp TTCCTTCCACAACCCAGAATAACCACAAGATGTAAGTGGAGTCTACACAGACAGTCATCCAGGCTGGAGTaGAGTGGCGTGATCTCTGCT +
Preference number: 2 (lower is better)
Translates to: FLPQPRITTRCKWSLHRQSSRLE*SGVISA
Trigger: AGCAGAGATCACGCCACTGCACTCCAGCCTGGATGA...CTGTCTGTGTAGACTCCACTTACATCTTGTGGTTATTCTGGGTTGTGGAAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR-3UTR CCA 90 bp GTGATTCTTGACAGGGCCGGGGCACTGTCACTAGGAGATGAATTTCAGCTCTTCGCACGTGGCACATATTaGTCCCTAGTTACATTAAGG +
Preference number: 2 (lower is better)
Translates to: VILDRAGALSLGDEFQLFARGTY*SLVTLR
Trigger: CCTTAATGTAACTAGGGACCAATATGTGCCACGTGC...GAAGAGCTGAAATTCATCTCCTAGTGACAGTGCCCCGGCCCTGTCAAGAATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR-3UTR CCA 90 bp TTTATTGTCTTTGAAAGAGGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGCAGCCACAGGCACGTaGCACATATTGGTCCCTAGT +
Preference number: 2 (lower is better)
Translates to: FIVFERGFTQTSAATPPDAATGT*HILVPS
Trigger: ACTAGGGACCAATATGTGCCACGTGCCTGTGGCTGC...ATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCCTCTTTCAAAGACAATAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR CAA 90 bp TCGTGCCTCACAGAAGCACGGACAATTCTGTGCTATTTATTGTCTTaGAAAGAGGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATG +
Preference number: 2 (lower is better)
Translates to: SCLTEARTILCYLLS*KEGSLKPLPQHLQM
Trigger: CATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCCTCTTTCAAAGACAATAAATAGCACAGAATTGTCCGTGCTTCTGTGAGGCACGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR-3UTR GCA 90 bp TGCCTCTTCTACAAAGTGGGTTGGCAATTACAGAAATTCTTTCCCTTTTGGGTTGGATGGTTGTGCCACTaGCCAGGCAGTGATCAAGCC +
Preference number: 2 (lower is better)
Translates to: CLFYKVGWQLQKFFPFWVGWLCH*PGSDQA
Trigger: GGCTTGATCACTGCCTGGGCAGTGGCACAACCATCC...AACCCAAAAGGGAAAGAATTTCTGTAATTGCCAACCCACTTTGTAGAAGAGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR-3UTR GCA 90 bp CATCCTACCAAGCTGCTTCTGCTATTCTTTGCTTTACACTTCAGCTCATTTACTGGATGGTTGTGCCACTaGCCAGGCAGTGATCAAGCC +
Preference number: 2 (lower is better)
Translates to: HPTKLLLLFFALHFSSFTGWLCH*PGSDQA
Trigger: GGCTTGATCACTGCCTGGGCAGTGGCACAACCATCC...AGTAAATGAGCTGAAGTGTAAAGCAAAGAATAGCAGAAGCAGCTTGGTAGGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR-3UTR GCA 90 bp AATTCAAGGGCTCATGCCTCTTCTACAAAGTGGGTTGGCAATTACAGAAATTCTCATGGGGGATGGTTGTaGCACTGCCCAGGCAGTGAT +
Preference number: 2 (lower is better)
Translates to: NSRAHASSTKWVGNYRNSHGGWL*HCPGSD
Trigger: ATCACTGCCTGGGCAGTGGCACAACCATCCCCCATG...AGAATTTCTGTAATTGCCAACCCACTTTGTAGAAGAGGCATGAGCCCTTGAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR-3UTR GCA 90 bp GTGATTCTTGACAGGGCCGGGGCACTGTCACTAGGAGATGAATTTCAGCTCTTCTCCATCCTACCAAGCTaGTTCTGCTATTCTTTGCTT +
Preference number: 2 (lower is better)
Translates to: VILDRAGALSLGDEFQLFSILPS*FCYSLL
Trigger: AAGCAAAGAATAGCAGAAGCAGCTTGGTAGGATGGA...GAAGAGCTGAAATTCATCTCCTAGTGACAGTGCCCCGGCCCTGTCAAGAATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR-3UTR CCA 90 bp GTGCTATTTATTGTCTTTGAAAGAGGGTTCACTCAAACCTCTGCCGCAACACCTTGTTCTGTAGCGACATaGGGGATGGTTGTGCCACTG +
Preference number: 2 (lower is better)
Translates to: VLFIVFERGFTQTSAATPCSVAT*GMVVPL
Trigger: CAGTGGCACAACCATCCCCCATGTCGCTACAGAACA...AGGTGTTGCGGCAGAGGTTTGAGTGAACCCTCTTTCAAAGACAATAAATAGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR-3UTR CCA 90 bp GTGATTCTTGACAGGGCCGGGGCACTGTCACTAGGAGATGAATTTCAGCTCTTCACCACAAGATGTAAGTaGAGTCTACACAGACAGAGA +
Preference number: 2 (lower is better)
Translates to: VILDRAGALSLGDEFQLFTTRCK*SLHRQR
Trigger: TCTCTGTCTGTGTAGACTCCACTTACATCTTGTGGT...GAAGAGCTGAAATTCATCTCCTAGTGACAGTGCCCCGGCCCTGTCAAGAATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR-3UTR CCA 90 bp TGCCTCTTCTACAAAGTGGGTTGGCAATTACAGAAATTCTTTCCCTTTTGGGTTGGCCTCCCAAGGTGTTaGGATTACAGGCGTGAGCCA +
Preference number: 2 (lower is better)
Translates to: CLFYKVGWQLQKFFPFWVGLPRC*DYRREP
Trigger: TGGCTCACGCCTGTAATCCCAACACCTTGGGAGGCC...AACCCAAAAGGGAAAGAATTTCTGTAATTGCCAACCCACTTTGTAGAAGAGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR-3UTR TCA 90 bp TGCCTCTTCTACAAAGTGGGTTGGCAATTACAGAAATTCTTTCCCTTTTGGGTTTTGCTCTTTTGGAGGTaGGGGAGCAGCACCACACCA +
Preference number: 2 (lower is better)
Translates to: CLFYKVGWQLQKFFPFWVLLFWR*GSSTTP
Trigger: TGGTGTGGTGCTGCTCCCTCACCTCCAAAAGAGCAA...AACCCAAAAGGGAAAGAATTTCTGTAATTGCCAACCCACTTTGTAGAAGAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR-3UTR TCA 90 bp GTGATTCTTGACAGGGCCGGGGCACTGTCACTAGGAGATGAATTTCAGCTCTTCTTAATTAATGGGCCCTaGGTAGTTCCTTCCTCAAAT +
Preference number: 2 (lower is better)
Translates to: VILDRAGALSLGDEFQLFLINGP*VVPSSN
Trigger: ATTTGAGGAAGGAACTACTCAGGGCCCATTAATTAA...GAAGAGCTGAAATTCATCTCCTAGTGACAGTGCCCCGGCCCTGTCAAGAATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672652.1
3UTR-3UTR GCA 90 bp TTCACTCAAACCTCTGCCGCAACACCTCCAGATGCACATTCGGTGTCTTCTGTGGGCAGGGGTAGGATTTaGATCTGTTTAAGATTACAA +
Preference number: 2 (lower is better)
Translates to: FTQTSAATPPDAHSVSSVGRGRI*ICLRLQ
Trigger: TTGTAATCTTAAACAGATGCAAATCCTACCCCTGCC...CACAGAAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR-3UTR GCA 90 bp CATCCTACCAAGCTGCTTCTGCTATTCTTTGCTTTACACTTCAGCTCATTTACTAGAGGTGCTCCTTCGTaGCTCACAGAAGCACGGACA +
Preference number: 2 (lower is better)
Translates to: HPTKLLLLFFALHFSSFTRGAPS*LTEART
Trigger: TGTCCGTGCTTCTGTGAGGCACGAAGGAGCACCTCT...AGTAAATGAGCTGAAGTGTAAAGCAAAGAATAGCAGAAGCAGCTTGGTAGGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR-3UTR GCA 90 bp TGCCTCTTCTACAAAGTGGGTTGGCAATTACAGAAATTCTTTCCCTTTTGGGTTTTCACGCCATTCTCCTaGCTCAGCCTCCAGAGTAGC +
Preference number: 2 (lower is better)
Translates to: CLFYKVGWQLQKFFPFWVFTPFS*LSLQSS
Trigger: GCTACTCTGGAGGCTGAGGCAGGAGAATGGCGTGAA...AACCCAAAAGGGAAAGAATTTCTGTAATTGCCAACCCACTTTGTAGAAGAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR-3UTR GCA 90 bp GTTAGCGATTGCTATAGCCTCCTCCTCTGTATCGAACTTGATAACTGGTGCCAGTCATGGATGCCCCTTTaGACCAAGAATTGGTTTGAG +
Preference number: 2 (lower is better)
Translates to: VSDCYSLLLCIELDNWCQSWMPL*TKNWFE
Trigger: CTCAAACCAATTCTTGGTGCAAAGGGGCATCCATGA...CTGGCACCAGTTATCAAGTTCGATACAGAGGAGGAGGCTATAGCAATCGCTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672652.1
3UTR-3UTR CCA 90 bp ATCGCTGGGAAGTTCCTGCTGAGAACTCACGGTAGCTATGCCAGAAAAGTACTTGCACGTGGCACATATTaGTCCCTAGTTACATTAAGG +
Preference number: 2 (lower is better)
Translates to: IAGKFLLRTHGSYARKVLARGTY*SLVTLR
Trigger: CCTTAATGTAACTAGGGACCAATATGTGCCACGTGC...AAGTACTTTTCTGGCATAGCTACCGTGAGTTCTCAGCAGGAACTTCCCAGCGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR-3UTR CCA 90 bp CCATCCTACCAAGCTGCTTCTGCTATTCTTTGCTTTACACTTCAGCTCATTTACTGTTCTGTAGCGACATaGGGGATGGTTGTGCCACTG +
Preference number: 2 (lower is better)
Translates to: PSYQAASAILCFTLQLIYCSVAT*GMVVPL
Trigger: CAGTGGCACAACCATCCCCCATGTCGCTACAGAACA...GTAAATGAGCTGAAGTGTAAAGCAAAGAATAGCAGAAGCAGCTTGGTAGGATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR-3UTR CCA 90 bp TGCCTCTTCTACAAAGTGGGTTGGCAATTACAGAAATTCTTTCCCTTTTGGGTTGGGACCTTGGGAATGTaGCTAGTACACTCCAGGCCA +
Preference number: 2 (lower is better)
Translates to: CLFYKVGWQLQKFFPFWVGTLGM*LVHSRP
Trigger: TGGCCTGGAGTGTACTAGCCACATTCCCAAGGTCCC...AACCCAAAAGGGAAAGAATTTCTGTAATTGCCAACCCACTTTGTAGAAGAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR-3UTR TCA 90 bp AATTCAAGGGCTCATGCCTCTTCTACAAAGTGGGTTGGCAATTACAGAAATTCTAAGAACAGGCTCAGGTaGCAGCCACTTACTCAGGCT +
Preference number: 2 (lower is better)
Translates to: NSRAHASSTKWVGNYRNSKNRLR*QPLTQA
Trigger: AGCCTGAGTAAGTGGCTGTCACCTGAGCCTGTTCTT...AGAATTTCTGTAATTGCCAACCCACTTTGTAGAAGAGGCATGAGCCCTTGAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR-3UTR TCA 90 bp TTCCTTCCACAACCCAGAATAACCACAAGATGTAAGTGGAGTCTACACAGACAGTTCCCAGTGGCTCAATaGGGGATGTTAAATCCTAGG +
Preference number: 2 (lower is better)
Translates to: FLPQPRITTRCKWSLHRQFPVAQ*GMLNPR
Trigger: CCTAGGATTTAACATCCCTCATTGAGCCACTGGGAA...CTGTCTGTGTAGACTCCACTTACATCTTGTGGTTATTCTGGGTTGTGGAAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR-3UTR GCA 90 bp TGCCTCTTCTACAAAGTGGGTTGGCAATTACAGAAATTCTTTCCCTTTTGGGTTGTTCACTCAAACCTCTaGCGCAACACCTCCAGATGC +
Preference number: 2 (lower is better)
Translates to: CLFYKVGWQLQKFFPFWVVHSNL*RNTSRC
Trigger: GCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAAC...AACCCAAAAGGGAAAGAATTTCTGTAATTGCCAACCCACTTTGTAGAAGAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR-3UTR GCA 90 bp TGCCTCTTCTACAAAGTGGGTTGGCAATTACAGAAATTCTTTCCCTTTTGGGTTAGGAATAGGGAGAGGTaGTCCTTCGTGCCTCACAGA +
Preference number: 2 (lower is better)
Translates to: CLFYKVGWQLQKFFPFWVRNRER*SFVPHR
Trigger: TCTGTGAGGCACGAAGGAGCACCTCTCCCTATTCCT...AACCCAAAAGGGAAAGAATTTCTGTAATTGCCAACCCACTTTGTAGAAGAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR-3UTR GCA 90 bp AAGTGGAGTCTACACAGACAGAGATGGGGAAAGGAAGGTGCTTCGTCTCCACCTTCATTAGATAAAAGGTaGCTGAAATTCAAGGGCTCA +
Preference number: 2 (lower is better)
Translates to: KWSLHRQRWGKEGASSPPSLDKR*LKFKGS
Trigger: TGAGCCCTTGAATTTCAGGCACCTTTTATCTAATGA...AGGTGGAGACGAAGCACCTTCCTTTCCCCATCTCTGTCTGTGTAGACTCCACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR-3UTR CCA 90 bp TGCCTCTTCTACAAAGTGGGTTGGCAATTACAGAAATTCTTTCCCTTTTGGGTTACTGTATCCATGGGATaGGAGGTGCTGAACACACGC +
Preference number: 2 (lower is better)
Translates to: CLFYKVGWQLQKFFPFWVTVSMG*EVLNTR
Trigger: GCGTGTGTTCAGCACCTCCCATCCCATGGATACAGT...AACCCAAAAGGGAAAGAATTTCTGTAATTGCCAACCCACTTTGTAGAAGAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR-3UTR CCA 90 bp ATCGCTGGGAAGTTCCTGCTGAGAACTCACGGTAGCTATGCCAGAAAAGTACTTCTTTTACTTTCTCTCTaGCTCACAGTATCGCAAGGA +
Preference number: 2 (lower is better)
Translates to: IAGKFLLRTHGSYARKVLLLLSL*LTVSQG
Trigger: TCCTTGCGATACTGTGAGCCAGAGAGAAAGTAAAAG...AAGTACTTTTCTGGCATAGCTACCGTGAGTTCTCAGCAGGAACTTCCCAGCGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR-3UTR CCA 90 bp CTATGCCAGAAAAGTACTTTCTTCACAGGAGGTGTTGAAATAATGCCGGATAAAGGGACCTTGGGAATGTaGCTAGTACACTCCAGGCCA +
Preference number: 2 (lower is better)
Translates to: LCQKSTFFTGGVEIMPDKGTLGM*LVHSRP
Trigger: TGGCCTGGAGTGTACTAGCCACATTCCCAAGGTCCC...TTTATCCGGCATTATTTCAACACCTCCTGTGAAGAAAGTACTTTTCTGGCATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR-3UTR CCA 90 bp AAGTTCCTGCTGAGAACTCACGGTAGCTATGCCAGAAAAGTACTTTCTTCACAGTCAATATCTCCCTCTTaGTCTAGATCAGGAGCTGGC +
Preference number: 2 (lower is better)
Translates to: KFLLRTHGSYARKVLSSQSISPS*SRSGAG
Trigger: GCCAGCTCCTGATCTAGACCAAGAGGGAGATATTGA...CTGTGAAGAAAGTACTTTTCTGGCATAGCTACCGTGAGTTCTCAGCAGGAACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR-3UTR GCA 90 bp AATTCAAGGGCTCATGCCTCTTCTACAAAGTGGGTTGGCAATTACAGAAATTCTGTGTGCCCAGGGTCTTaGCAGACCTTTAGTTACTCA +
Preference number: 2 (lower is better)
Translates to: NSRAHASSTKWVGNYRNSVCPGS*QTFSYS
Trigger: TGAGTAACTAAAGGTCTGGCAAGACCCTGGGCACAC...AGAATTTCTGTAATTGCCAACCCACTTTGTAGAAGAGGCATGAGCCCTTGAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR-3UTR CCA 90 bp ATCGCTGGGAAGTTCCTGCTGAGAACTCACGGTAGCTATGCCAGAAAAGTACTTGCCTCTTCTACAAAGTaGGTTGGCAATTACAGAAAT +
Preference number: 2 (lower is better)
Translates to: IAGKFLLRTHGSYARKVLASSTK*VGNYRN
Trigger: ATTTCTGTAATTGCCAACCCACTTTGTAGAAGAGGC...AAGTACTTTTCTGGCATAGCTACCGTGAGTTCTCAGCAGGAACTTCCCAGCGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR-3UTR CCA 90 bp TCAGTACAAATTGCCTCCCCTACTTCCTTGGCATTCTTTCGAGAACAGGGAATATTTACAAAGGCATCATaGATGCCCCTTTGCACCAAG +
Preference number: 2 (lower is better)
Translates to: SVQIASPTSLAFFREQGIFTKAS*MPLCTK
Trigger: CTTGGTGCAAAGGGGCATCCATGATGCCTTTGTAAA...TATTCCCTGTTCTCGAAAGAATGCCAAGGAAGTAGGGGAGGCAATTTGTACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672652.1
3UTR-3UTR TCA 90 bp TTCTCTTTCTTCCCACAACCAAGGGCCATTTTACTAAACAATAAGCTATTTCCTCTGGGAAGTTCCTGCTaGGAACTCACGGTAGCTATG +
Preference number: 2 (lower is better)
Translates to: FSFFPQPRAILLNNKLFPLGSSC*ELTVAM
Trigger: CATAGCTACCGTGAGTTCTCAGCAGGAACTTCCCAG...AGGAAATAGCTTATTGTTTAGTAAAATGGCCCTTGGTTGTGGGAAGAAAGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR-3UTR GCA 90 bp TTATTGTCTTTGAAAGAGGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGGGCAGGGGTAGGATTTaGATCTGTTTAAGATTACAA +
Preference number: 2 (lower is better)
Translates to: LLSLKEGSLKPLPQHLQMGRGRI*ICLRLQ
Trigger: TTGTAATCTTAAACAGATGCAAATCCTACCCCTGCC...CATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCCTCTTTCAAAGACAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR-3UTR GCA 90 bp TCTGCCAAGAAAGCAGTCCCAGACAATACCATAAATGAATGGGTGTGGCTATGCAAATCTTTTAGGCTTTaGAGGCTATACTGTCCCTGT +
Preference number: 2 (lower is better)
Translates to: SAKKAVPDNTINEWVWLCKSFRL*RLYCPC
Trigger: ACAGGGACAGTATAGCCTGCAAAGCCTAAAAGATTT...GCATAGCCACACCCATTCATTTATGGTATTGTCTGGGACTGCTTTCTTGGCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR CAA 90 bp ATTTTGGACACCAGAGGATCAGTACAAATTGCCTCCCCTACTTCCTaGGCATTCTTTCGAGAACAGGGAATAACATTGTATACACCTGAA +
Preference number: 2 (lower is better)
Translates to: ILDTRGSVQIASPTS*AFFREQGITLYTPE
Trigger: TTCAGGTGTATACAATGTTATTCCCTGTTCTCGAAAGAATGCCAAGGAAGTAGGGGAGGCAATTTGTACTGATCCTCTGGTGTCCAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672557.1
ENST00000672652.1
3UTR-3UTR TCA 90 bp TGCCTCTTCTACAAAGTGGGTTGGCAATTACAGAAATTCTTTCCCTTTTGGGTTCACCAAGAATTGGTTTaGGCAAACACAAGTCTGTCC +
Preference number: 2 (lower is better)
Translates to: CLFYKVGWQLQKFFPFWVHQELV*ANTSLS
Trigger: GGACAGACTTGTGTTTGCTCAAACCAATTCTTGGTG...AACCCAAAAGGGAAAGAATTTCTGTAATTGCCAACCCACTTTGTAGAAGAGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672652.1
3UTR-3UTR GCA 90 bp TGCCTCTTCTACAAAGTGGGTTGGCAATTACAGAAATTCTTTCCCTTTTGGGTTCAAAGGCATCATGGATaGCCCTTTGCACCAAGAATT +
Preference number: 2 (lower is better)
Translates to: CLFYKVGWQLQKFFPFWVQRHHG*PFAPRI
Trigger: AATTCTTGGTGCAAAGGGGCATCCATGATGCCTTTG...AACCCAAAAGGGAAAGAATTTCTGTAATTGCCAACCCACTTTGTAGAAGAGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672652.1
3UTR-3UTR CCA 90 bp AAGTTCCTGCTGAGAACTCACGGTAGCTATGCCAGAAAAGTACTTTCTTCACAGGCCTCTTCTACAAAGTaGGTTGGCAATTACAGAAAT +
Preference number: 2 (lower is better)
Translates to: KFLLRTHGSYARKVLSSQASSTK*VGNYRN
Trigger: ATTTCTGTAATTGCCAACCCACTTTGTAGAAGAGGC...CTGTGAAGAAAGTACTTTTCTGGCATAGCTACCGTGAGTTCTCAGCAGGAACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR-3UTR CCA 90 bp TTTATTGTCTTTGAAAGAGGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATCTTTGCACCAAGAATTaGTTTGAGCAAACACAAGTC +
Preference number: 2 (lower is better)
Translates to: FIVFERGFTQTSAATPPDLCTKN*FEQTQV
Trigger: GACTTGTGTTTGCTCAAACCAATTCTTGGTGCAAAG...ATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCCTCTTTCAAAGACAATAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672652.1
3UTR-3UTR TCA 90 bp TTCTCTTTCTTCCCACAACCAAGGGCCATTTTACTAAACAATAAGCTATTTCCTAACATTGTATACACCTaGAGGAATCCCAGCCTGGCT +
Preference number: 2 (lower is better)
Translates to: FSFFPQPRAILLNNKLFPNIVYT*RNPSLA
Trigger: AGCCAGGCTGGGATTCCTTCAGGTGTATACAATGTT...AGGAAATAGCTTATTGTTTAGTAAAATGGCCCTTGGTTGTGGGAAGAAAGAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672652.1
3UTR-3UTR GCA 90 bp TGCCTCTTCTACAAAGTGGGTTGGCAATTACAGAAATTCTTTCCCTTTTGGGTTGGCAGGGGTAGGATTTaGATCTGTTTAAGATTACAA +
Preference number: 2 (lower is better)
Translates to: CLFYKVGWQLQKFFPFWVGRGRI*ICLRLQ
Trigger: TTGTAATCTTAAACAGATGCAAATCCTACCCCTGCC...AACCCAAAAGGGAAAGAATTTCTGTAATTGCCAACCCACTTTGTAGAAGAGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR-3UTR GCA 90 bp CTATGCCAGAAAAGTACTTTCTTCACAGGAGGTGTTGAAATAATGCCGGATAAAGGGTTCAGGAGTAATTaGATCCAGCACTACTTTCAT +
Preference number: 2 (lower is better)
Translates to: LCQKSTFFTGGVEIMPDKGFRSN*IQHYFH
Trigger: ATGAAAGTAGTGCTGGATGCAATTACTCCTGAACCC...TTTATCCGGCATTATTTCAACACCTCCTGTGAAGAAAGTACTTTTCTGGCATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR-3UTR GCA 90 bp CTATGCCAGAAAAGTACTTTCTTCACAGGAGGTGTTGAAATAATGCCGGATAAACCGCCTAATTGGATTTaGATCTGTTTAAGATTACGG +
Preference number: 2 (lower is better)
Translates to: LCQKSTFFTGGVEIMPDKPPNWI*ICLRLR
Trigger: CCGTAATCTTAAACAGATGCAAATCCAATTAGGCGG...TTTATCCGGCATTATTTCAACACCTCCTGTGAAGAAAGTACTTTTCTGGCATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR-3UTR TCA 90 bp TTCTCTTTCTTCCCACAACCAAGGGCCATTTTACTAAACAATAAGCTATTTCCTATCAAGGATATACAATaGGTCTCTGGCCTCAATTTA +
Preference number: 2 (lower is better)
Translates to: FSFFPQPRAILLNNKLFPIKDIQ*VSGLNL
Trigger: TAAATTGAGGCCAGAGACTCATTGTATATCCTTGAT...AGGAAATAGCTTATTGTTTAGTAAAATGGCCCTTGGTTGTGGGAAGAAAGAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR-3UTR CCA 90 bp TTCTCTTTCTTCCCACAACCAAGGGCCATTTTACTAAACAATAAGCTATTTCCTAAATTCTTTCCCTTTTaGGTTGACTGTGGTGAAAGT +
Preference number: 2 (lower is better)
Translates to: FSFFPQPRAILLNNKLFPKFFPF*VDCGES
Trigger: ACTTTCACCACAGTCAACCCAAAAGGGAAAGAATTT...AGGAAATAGCTTATTGTTTAGTAAAATGGCCCTTGGTTGTGGGAAGAAAGAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR CAA 90 bp TCAATTTATGAACCCATGAGCCAAATATGCAAGAAGACTCAAAATTaGCCACCCAGCCAAAGAATCTACTGGCTTACAATGTTAAAAATT +
Preference number: 2 (lower is better)
Translates to: SIYEPMSQICKKTQN*PPSQRIYWLTMLKI
Trigger: AATTTTTAACATTGTAAGCCAGTAGATTCTTTGGCTGGGTGGCAAATTTTGAGTCTTCTTGCATATTTGGCTCATGGGTTCATAAATTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR-3UTR CCA 90 bp TTCTCTTTCTTCCCACAACCAAGGGCCATTTTACTAAACAATAAGCTATTTCCTAATACCATAAATGAATaGGTGTGGCTATGCTCTAAT +
Preference number: 2 (lower is better)
Translates to: FSFFPQPRAILLNNKLFPNTINE*VWLCSN
Trigger: ATTAGAGCATAGCCACACCCATTCATTTATGGTATT...AGGAAATAGCTTATTGTTTAGTAAAATGGCCCTTGGTTGTGGGAAGAAAGAGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR GCA 72 bp GTCTTCGGCAGGCTTCACCACGACAGTACAGCCGGCTaGCAGGGCGGCCCCCACCTTCCGGGTGATCATGGC +
Preference number: 3 (lower is better)
Translates to: VFGRLHHDSTAG*QGGPHLPGDHG
Trigger: GCCATGATCACCCGGAAGGTGGGGGCCGCCCTGGCAGCCGGCTGTACTGTCGTGGTGAAGCCTGCCGAAGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672557.1
3UTR TCA 72 bp GCGACATGGGGGATGGTTGTGCCACTGCCCAGGCAGTaGTCAAGCCTTTGTGACGGCCCATGGGGCTGGGCC +
Preference number: 3 (lower is better)
Translates to: ATWGMVVPLPRQ*SSLCDGPWGWA
Trigger: GGCCCAGCCCCATGGGCCGTCACAAAGGCTTGATCACTGCCTGGGCAGTGGCACAACCATCCCCCATGTCGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR TCA 72 bp CAACACCTCCAGATGCACATTCGGTGTCTTCTGTGCTaGGCTGGCAGATGCCGGGGAGGGGTGCTGTGCCCC +
Preference number: 3 (lower is better)
Translates to: QHLQMHIRCLLC*AGRCRGGVLCP
Trigger: GGGGCACAGCACCCCTCCCCGGCATCTGCCAGCTCAGCACAGAAGACACCGAATGTGCATCTGGAGGTGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR GCA 72 bp TATGGGCTGCTTGAGGACCAGGGCCCGCCTGTCCTTTaGCGGGGTGTGGATAATGTCTCCGTAAACACGGCG +
Preference number: 3 (lower is better)
Translates to: YGLLEDQGPPVL*RGVDNVSVNTA
Trigger: CGCCGTGTTTACGGAGACATTATCCACACCCCGGCAAAGGACAGGCGGGCCCTGGTCCTCAAGCAGCCCATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672557.1
3UTR TCA 72 bp GCAGCACCACACCAGGACAGAAAGAACAGGCTCAGGTaGCAGCCACTTACTCAGGCTCAGGTCGGTGGGCAA +
Preference number: 3 (lower is better)
Translates to: AAPHQDRKNRLR*QPLTQAQVGGQ
Trigger: TTGCCCACCGACCTGAGCCTGAGTAAGTGGCTGTCACCTGAGCCTGTTCTTTCTGTCCTGGTGTGGTGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR GCA 72 bp CTGCCTGCCAGTCACAGTCAAGGGTCTCCTTCAAGGTaGTCTGGGCCCATGTTCTGTAGCGACATGGGGGAT +
Preference number: 3 (lower is better)
Translates to: LPASHSQGSPSR*SGPMFCSDMGD
Trigger: ATCCCCCATGTCGCTACAGAACATGGGCCCAGAGCACCTTGAAGGAGACCCTTGACTGTGACTGGCAGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR GCA 72 bp ATGCCATACTTGGACCCCTCTCGCCCAAGGCCGGACTaGTTCACTCCACCAAAAGGGCACTCCACAGAGGAA +
Preference number: 3 (lower is better)
Translates to: MPYLDPSRPRPD*FTPPKGHSTEE
Trigger: TTCCTCTGTGGAGTGCCCTTTTGGTGGAGTGAAGCAGTCCGGCCTTGGGCGAGAGGGGTCCAAGTATGGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672652.1
3UTR-3UTR CAA 90 bp AGGTGCTCTGGGCCCATGTTCTGTAGCGACATGGGGGATGGTTGTGCCACTGCCGGCACGTGGCACATATaGGTCCCTAGTTACATTAAG +
Preference number: 3 (lower is better)
Translates to: RCSGPMFCSDMGDGCATAGTWHI*VPSYIK
Trigger: CTTAATGTAACTAGGGACCAATATGTGCCACGTGCC...GGCAGTGGCACAACCATCCCCCATGTCGCTACAGAACATGGGCCCAGAGCACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR-3UTR CAA 90 bp TCTGGGCCCATGTTCTGTAGCGACATGGGGGATGGTTGTGCCACTGCCCAGGCAACAGCCTGGTCCACGTaGGCACTGTCAAATACTATA +
Preference number: 3 (lower is better)
Translates to: SGPMFCSDMGDGCATAQATAWST*ALSNTI
Trigger: TATAGTATTTGACAGTGCCAACGTGGACCAGGCTGT...TGCCTGGGCAGTGGCACAACCATCCCCCATGTCGCTACAGAACATGGGCCCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672652.1
3UTR CCA 72 bp GTGCTGGTTCTCTGGGAGTCTGCAGCCACAGGCACGTaGCACATATTGGTCCCTAGTTACATTAAGGGCAGG +
Preference number: 3 (lower is better)
Translates to: VLVLWESAATGT*HILVPSYIKGR
Trigger: CCTGCCCTTAATGTAACTAGGGACCAATATGTGCCACGTGCCTGTGGCTGCAGACTCCCAGAGAACCAGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR GCA 72 bp AGGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATaGACATTCGGTGTCTTCTGTGCTGAGCTGGCAGAT +
Preference number: 3 (lower is better)
Translates to: RVHSNLCRNTSR*TFGVFCAELAD
Trigger: ATCTGCCAGCTCAGCACAGAAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR CCA 72 bp TTTCAGCTCTTCCTTCTCCTTGGGACCTTGGGAATGTaGCTAGTACACTCCAGGCCAGATGCTAGGCAGCTC +
Preference number: 3 (lower is better)
Translates to: FQLFLLLGTLGM*LVHSRPDARQL
Trigger: GAGCTGCCTAGCATCTGGCCTGGAGTGTACTAGCCACATTCCCAAGGTCCCAAGGAGAAGGAAGAGCTGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR-3UTR CAA 90 bp TTATTGTCTTTGAAAGAGGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGCGACATGGGGGATGGTaGTGCCACTGCCCAGGCAGT +
Preference number: 3 (lower is better)
Translates to: LLSLKEGSLKPLPQHLQMRHGGW*CHCPGS
Trigger: ACTGCCTGGGCAGTGGCACAACCATCCCCCATGTCG...CATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCCTCTTTCAAAGACAATAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR TCA 72 bp TTGATAACTGGTGCCAGAGGCCCGAAAGTCTCTTCATaGGTGCACAGCATGTCCTGGGTGACATTGCACAGC +
Preference number: 3 (lower is better)
Translates to: LITGARGPKVSS*VHSMSWVTLHS
Trigger: GCTGTGCAATGTCACCCAGGACATGCTGTGCACTCATGAAGAGACTTTCGGGCCTCTGGCACCAGTTATCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672652.1
3UTR TCA 72 bp CAAAAGGGCACTCCACAGAGGAAATTAATCCTTCGTTaGCGCCAACCATGCCCACTTCCAGCTGCTCTGCCA +
Preference number: 3 (lower is better)
Translates to: QKGTPQRKLILR*RQPCPLPAALP
Trigger: TGGCAGAGCAGCTGGAAGTGGGCATGGTTGGCGTCAACGAAGGATTAATTTCCTCTGTGGAGTGCCCTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672652.1
3UTR GCA 72 bp GCAAACACAAGTCTGTCCAGTGTTCCTAAATTTAGATaGCATGGCCCCTGCTACAGCCTGGTCCACGTTGGC +
Preference number: 3 (lower is better)
Translates to: ANTSLSSVPKFR*HGPCYSLVHVG
Trigger: GCCAACGTGGACCAGGCTGTAGCAGGGGCCATGGCATCTAAATTTAGGAACACTGGACAGACTTGTGTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672652.1
3UTR GCA 72 bp ACCTACGCGCAGGTTCTTCTTCATGGCCTCGGCGAATaGTTTTACAAAGGCATCATGGATGCCCCTTTGCAC +
Preference number: 3 (lower is better)
Translates to: TYAQVLLHGLGE*FYKGIMDAPLH
Trigger: GTGCAAAGGGGCATCCATGATGCCTTTGTAAAAGCATTCGCCGAGGCCATGAAGAAGAACCTGCGCGTAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672652.1
3UTR-3UTR CAA 90 bp GAGGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGCACATTCGGTGTCTTGGCACGTGGCACATATaGGTCCCTAGTTACATTAAG +
Preference number: 3 (lower is better)
Translates to: EGSLKPLPQHLQMHIRCLGTWHI*VPSYIK
Trigger: CTTAATGTAACTAGGGACCAATATGTGCCACGTGCC...AAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR GCA 72 bp CTGTCCAGTGTTCCTAAATTTAGATGCCATGGCCCCTaGTACAGCCTGGTCCACGTTGGCACTGTCAAATAC +
Preference number: 3 (lower is better)
Translates to: LSSVPKFRCHGP*YSLVHVGTVKY
Trigger: GTATTTGACAGTGCCAACGTGGACCAGGCTGTAGCAGGGGCCATGGCATCTAAATTTAGGAACACTGGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672652.1
3UTR-3UTR CAA 90 bp ACCTTGGGAATGTGGCTAGTACACTCCAGGCCAGATGCTAGGCAGCTCCCTGTGCTTCTACAAAGTGGGTaGGCAATTACAGAAATTCTT +
Preference number: 3 (lower is better)
Translates to: TLGMWLVHSRPDARQLPVLLQSG*AITEIL
Trigger: AAGAATTTCTGTAATTGCCAACCCACTTTGTAGAAG...CACAGGGAGCTGCCTAGCATCTGGCCTGGAGTGTACTAGCCACATTCCCAAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR-3UTR CAA 90 bp CTATGCCAGAAAAGTACTTTCTTCACAGGAGGTGTTGAAATAATGCCGGATAAACGTGATCTGCCTGCCTaGGCCTCCCAAGGTGTTGGG +
Preference number: 3 (lower is better)
Translates to: LCQKSTFFTGGVEIMPDKRDLPA*ASQGVG
Trigger: CCCAACACCTTGGGAGGCCAAGGCAGGCAGATCACG...TTTATCCGGCATTATTTCAACACCTCCTGTGAAGAAAGTACTTTTCTGGCATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR-3UTR CAA 90 bp TCTGCCAAGAAAGCAGTCCCAGACAATACCATAAATGAATGGGTGTGGCTATGCGCCTCCCCTACTTCCTaGGCATTCTTTCGAGAACAG +
Preference number: 3 (lower is better)
Translates to: SAKKAVPDNTINEWVWLCASPTS*AFFREQ
Trigger: CTGTTCTCGAAAGAATGCCAAGGAAGTAGGGGAGGC...GCATAGCCACACCCATTCATTTATGGTATTGTCTGGGACTGCTTTCTTGGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672652.1
3UTR GCA 72 bp TGGCCTCGGCGAATGCTTTTACAAAGGCATCATGGATaGCCCTTTGCACCAAGAATTGGTTTGAGCAAACAC +
Preference number: 3 (lower is better)
Translates to: WPRRMLLQRHHG*PFAPRIGLSKH
Trigger: GTGTTTGCTCAAACCAATTCTTGGTGCAAAGGGGCATCCATGATGCCTTTGTAAAAGCATTCGCCGAGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672652.1
3UTR CCA 72 bp CCTCAAATCCATTACCTACGCGCAGGTTCTTCTTCATaGCCTCGGCGAATGCTTTTACAAAGGCATCATGGA +
Preference number: 3 (lower is better)
Translates to: PQIHYLRAGSSS*PRRMLLQRHHG
Trigger: TCCATGATGCCTTTGTAAAAGCATTCGCCGAGGCCATGAAGAAGAACCTGCGCGTAGGTAATGGATTTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672652.1
3UTR-3UTR CAA 90 bp ATCGCTGGGAAGTTCCTGCTGAGAACTCACGGTAGCTATGCCAGAAAAGTACTTGGCACGTGGCACATATaGGTCCCTAGTTACATTAAG +
Preference number: 3 (lower is better)
Translates to: IAGKFLLRTHGSYARKVLGTWHI*VPSYIK
Trigger: CTTAATGTAACTAGGGACCAATATGTGCCACGTGCC...AAGTACTTTTCTGGCATAGCTACCGTGAGTTCTCAGCAGGAACTTCCCAGCGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR-3UTR CAA 90 bp CCACAACCCAGAATAACCACAAGATGTAAGTGGAGTCTACACAGACAGAGATGGGAGGATCAGTACAAATaGCCTCCCCTACTTCCTTGG +
Preference number: 3 (lower is better)
Translates to: PQPRITTRCKWSLHRQRWEDQYK*PPLLPW
Trigger: CCAAGGAAGTAGGGGAGGCAATTTGTACTGATCCTC...CCATCTCTGTCTGTGTAGACTCCACTTACATCTTGTGGTTATTCTGGGTTGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672652.1
3UTR-3UTR CAA 90 bp CAGGCACGTGGCACATATTGGTCCCTAGTTACATTAAGGGCAGGGGTAGGATTTGCACCAAGAATTGGTTaGAGCAAACACAAGTCTGTC +
Preference number: 3 (lower is better)
Translates to: QARGTYWSLVTLRAGVGFAPRIG*SKHKSV
Trigger: GACAGACTTGTGTTTGCTCAAACCAATTCTTGGTGC...AAATCCTACCCCTGCCCTTAATGTAACTAGGGACCAATATGTGCCACGTGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672652.1
3UTR-3UTR CAA 90 bp TTATTGTCTTTGAAAGAGGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGGGCACGTGGCACATATaGGTCCCTAGTTACATTAAG +
Preference number: 3 (lower is better)
Translates to: LLSLKEGSLKPLPQHLQMGTWHI*VPSYIK
Trigger: CTTAATGTAACTAGGGACCAATATGTGCCACGTGCC...CATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCCTCTTTCAAAGACAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR-3UTR CAA 90 bp TTCCTTCCACAACCCAGAATAACCACAAGATGTAAGTGGAGTCTACACAGACAGTCCTCTGTATCGAACTaGATAACTGGTGCCAGAGGC +
Preference number: 3 (lower is better)
Translates to: FLPQPRITTRCKWSLHRQSSVSN*ITGARG
Trigger: GCCTCTGGCACCAGTTATCAAGTTCGATACAGAGGA...CTGTCTGTGTAGACTCCACTTACATCTTGTGGTTATTCTGGGTTGTGGAAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672652.1
3UTR TCA 72 bp ATTCTTTCGAGAACAGGGAATAACATTGTATACACCTaGAGGAATCCCAGCCTGGCTTGCAAGCTCAGCCAG +
Preference number: 3 (lower is better)
Translates to: ILSRTGNNIVYT*RNPSLACKLSQ
Trigger: CTGGCTGAGCTTGCAAGCCAGGCTGGGATTCCTTCAGGTGTATACAATGTTATTCCCTGTTCTCGAAAGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672557.1
3UTR CCA 72 bp AGCTCCATAGAGACCCTTTTCACAGAGTTTGCTGCGTaGTGCAACAGGATCTTTCCTGTAGTTGTTGAACCA +
Preference number: 3 (lower is better)
Translates to: SSIETLFTEFAA*CNRIFPVVVEP
Trigger: TGGTTCAACAACTACAGGAAAGATCCTGTTGCACCACGCAGCAAACTCTGTGAAAAGGGTCTCTATGGAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672557.1
ENST00000672652.1
3UTR CCA 72 bp TTCATGGCCTCGGCGAATGCTTTTACAAAGGCATCATaGATGCCCCTTTGCACCAAGAATTGGTTTGAGCAA +
Preference number: 3 (lower is better)
Translates to: FMASANAFTKAS*MPLCTKNWFEQ
Trigger: TTGCTCAAACCAATTCTTGGTGCAAAGGGGCATCCATGATGCCTTTGTAAAAGCATTCGCCGAGGCCATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672652.1
3UTR GCA 72 bp GCATCAATTAAAATATGGTTCAGGAATAGGGAGAGGTaGTCCTTCGTGCCTCACAGAAGCACGGACAATTCT +
Preference number: 3 (lower is better)
Translates to: ASIKIWFRNRER*SFVPHRSTDNS
Trigger: AGAATTGTCCGTGCTTCTGTGAGGCACGAAGGAGCACCTCTCCCTATTCCTGAACCATATTTTAATTGATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR CCA 72 bp GAAGGTGCTTCGTCTCCACCTACTTGGCCGCCTAATTaGATTTGCATCTGTTTAAGATTACGGAGTCTTTCT +
Preference number: 3 (lower is better)
Translates to: EGASSPPTWPPN*ICICLRLRSLS
Trigger: AGAAAGACTCCGTAATCTTAAACAGATGCAAATCCAATTAGGCGGCCAAGTAGGTGGAGACGAAGCACCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR CCA 72 bp AGATGGGGAAAGGAAGGTGCTTCGTCTCCACCTACTTaGCCGCCTAATTGGATTTGCATCTGTTTAAGATTA +
Preference number: 3 (lower is better)
Translates to: RWGKEGASSPPT*PPNWICICLRL
Trigger: TAATCTTAAACAGATGCAAATCCAATTAGGCGGCCAAGTAGGTGGAGACGAAGCACCTTCCTTTCCCCATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR CCA 72 bp TTCCTAAATTTAGATGCCATGGCCCCTGCTACAGCCTaGTCCACGTTGGCACTGTCAAATACTATAAATGGA +
Preference number: 3 (lower is better)
Translates to: FLNLDAMAPATA*STLALSNTING
Trigger: TCCATTTATAGTATTTGACAGTGCCAACGTGGACCAGGCTGTAGCAGGGGCCATGGCATCTAAATTTAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672652.1
3UTR CCA 72 bp ACAAAGGCATCATGGATGCCCCTTTGCACCAAGAATTaGTTTGAGCAAACACAAGTCTGTCCAGTGTTCCTA +
Preference number: 3 (lower is better)
Translates to: TKASWMPLCTKN*FEQTQVCPVFL
Trigger: TAGGAACACTGGACAGACTTGTGTTTGCTCAAACCAATTCTTGGTGCAAAGGGGCATCCATGATGCCTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672652.1
3UTR TCA 72 bp ACCTTTTCTACCGCTTTTTCATTAATTAATGGGCCCTaGGTAGTTCCTTCCTCAAATCCATTACCTACGCGC +
Preference number: 3 (lower is better)
Translates to: TFSTAFSLINGP*VVPSSNPLPTR
Trigger: GCGCGTAGGTAATGGATTTGAGGAAGGAACTACTCAGGGCCCATTAATTAATGAAAAAGCGGTAGAAAAGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672652.1
3UTR GCA 72 bp GCTTCGTCTCCACCTACTTGGCCGCCTAATTGGATTTaGATCTGTTTAAGATTACGGAGTCTTTCTTTCAAA +
Preference number: 3 (lower is better)
Translates to: ASSPPTWPPNWI*ICLRLRSLSFK
Trigger: TTTGAAAGAAAGACTCCGTAATCTTAAACAGATGCAAATCCAATTAGGCGGCCAAGTAGGTGGAGACGAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR TCA 72 bp ATTTCATGTACATTATCATCGCTGGGAAGTTCCTGCTaGGAACTCACGGTAGCTATGCCAGAAAAGTACTTT +
Preference number: 3 (lower is better)
Translates to: ISCTLSSLGSSC*ELTVAMPEKYF
Trigger: AAAGTACTTTTCTGGCATAGCTACCGTGAGTTCTCAGCAGGAACTTCCCAGCGATGATAATGTACATGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR GCA 72 bp TCATTAGATAAAAGGTGCCTGAAATTCAAGGGCTCATaGCTCTTCTACAAAGTGGGTTGGCAATTACAGAAA +
Preference number: 3 (lower is better)
Translates to: SLDKRCLKFKGS*LFYKVGWQLQK
Trigger: TTTCTGTAATTGCCAACCCACTTTGTAGAAGAGGCATGAGCCCTTGAATTTCAGGCACCTTTTATCTAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR-3UTR CAA 90 bp TTCTCTTTCTTCCCACAACCAAGGGCCATTTTACTAAACAATAAGCTATTTCCTTCTTTCCCTTTTGGGTaGACTGTGGTGAAAGTACTT +
Preference number: 3 (lower is better)
Translates to: FSFFPQPRAILLNNKLFPSFPFG*TVVKVL
Trigger: AAGTACTTTCACCACAGTCAACCCAAAAGGGAAAGA...AGGAAATAGCTTATTGTTTAGTAAAATGGCCCTTGGTTGTGGGAAGAAAGAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR CCA 72 bp GCCAAGAAAGCAGTCCCAGACAATACCATAAATGAATaGGTGTGGCTATGCTCTAATAACATTTTGTTTATG +
Preference number: 3 (lower is better)
Translates to: AKKAVPDNTINE*VWLCSNNILFM
Trigger: CATAAACAAAATGTTATTAGAGCATAGCCACACCCATTCATTTATGGTATTGTCTGGGACTGCTTTCTTGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR GCA 72 bp TCTGTTAATTCCACGTTTATTAATCACACAGCTCTCTaGAGACTAGACACTAAAACACACAATTGTCAAAAA +
Preference number: 3 (lower is better)
Translates to: SVNSTFINHTAL*RLDTKTHNCQK
Trigger: TTTTTGACAATTGTGTGTTTTAGTGTCTAGTCTGCAGAGAGCTGTGTGATTAATAAACGTGGAATTAACAGA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357578.8
CDS-3UTR CCA 90 bp TTGTGCCACTGCCCAGGCAGTGATCAAGCCTTTGTGACGGCCCATGGGGCTGGGCCAGAGCGGCGCCGCTaGCCGGGTCTTGCACGGGGA +
Preference number: 4 (lower is better)
Translates to: LCHCPGSDQAFVTAHGAGPERRR*PGLARG
Trigger: TCCCCGTGCAAGACCCGGCCAGCGGCGCCGCTCTGG...CCCAGCCCCATGGGCCGTCACAAAGGCTTGATCACTGCCTGGGCAGTGGCACAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672652.1
CDS-3UTR GCA 90 bp AGGTGCTCTGGGCCCATGTTCTGTAGCGACATGGGGGATGGTTGTGCCACTGCCCCGCTGGCCGGGTCTTaGACGGGGAAGGTGGCGGCG +
Preference number: 4 (lower is better)
Translates to: RCSGPMFCSDMGDGCATAPLAGS*TGKVAA
Trigger: CGCCGCCACCTTCCCCGTGCAAGACCCGGCCAGCGG...GGCAGTGGCACAACCATCCCCCATGTCGCTACAGAACATGGGCCCAGAGCACCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672652.1
CDS-3UTR GCA 90 bp TTGTGCCACTGCCCAGGCAGTGATCAAGCCTTTGTGACGGCCCATGGGGCTGGGCGCAGTCGGCTACCATaGCCAGAGCGGCGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: LCHCPGSDQAFVTAHGAGRSRLP*PERRRW
Trigger: CCAGCGGCGCCGCTCTGGGCATGGTAGCCGACTGCG...CCCAGCCCCATGGGCCGTCACAAAGGCTTGATCACTGCCTGGGCAGTGGCACAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp GCTCTGGGCCCATGTTCTGTAGCGACATGGGGGATGGTTGTGCCACTGCCCAGGGCGGAGGCGGCAGCCTaGAAACGTCGACCCGAGGCG +
Preference number: 4 (lower is better)
Translates to: ALGPCSVATWGMVVPLPRAEAAA*KRRPEA
Trigger: CGCCTCGGGTCGACGTTTCCAGGCTGCCGCCTCCGC...CCTGGGCAGTGGCACAACCATCCCCCATGTCGCTACAGAACATGGGCCCAGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348925.2
ENST00000357578.8
CDS-3UTR CCA 90 bp TCTGGGCCCATGTTCTGTAGCGACATGGGGGATGGTTGTGCCACTGCCCAGGCACTTGCACGGGGAAGGTaGCGGCGGCCGGGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: SGPMFCSDMGDGCATAQALARGR*RRPGAS
Trigger: GCTGGCTCCCGGCCGCCGCCACCTTCCCCGTGCAAG...TGCCTGGGCAGTGGCACAACCATCCCCCATGTCGCTACAGAACATGGGCCCAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672652.1
CDS-3UTR TCA 90 bp TTGTGCCACTGCCCAGGCAGTGATCAAGCCTTTGTGACGGCCCATGGGGCTGGGCGCCTATGGGCTGCTTaGGGACCAGGGCCCGCCTGT +
Preference number: 4 (lower is better)
Translates to: LCHCPGSDQAFVTAHGAGRLWAA*GPGPAC
Trigger: ACAGGCGGGCCCTGGTCCTCAAGCAGCCCATAGGCG...CCCAGCCCCATGGGCCGTCACAAAGGCTTGATCACTGCCTGGGCAGTGGCACAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR TCA 90 bp CCGGGTGATCATGGCACTGGGGAAATTCCACGGGGTGATGACTGCAGCCACGCCCGCCTATGGGCTGCTTaGGGACCAGGGCCCGCCTGT +
Preference number: 4 (lower is better)
Translates to: PGDHGTGEIPRGDDCSHARLWAA*GPGPAC
Trigger: ACAGGCGGGCCCTGGTCCTCAAGCAGCCCATAGGCG...GGCGTGGCTGCAGTCATCACCCCGTGGAATTTCCCCAGTGCCATGATCACCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672557.1
CDS-3UTR TCA 90 bp GGATGGTTGTGCCACTGCCCAGGCAGTGATCAAGCCTTTGTGACGGCCCATGGGCGCCTATGGGCTGCTTaGGGACCAGGGCCCGCCTGT +
Preference number: 4 (lower is better)
Translates to: GWLCHCPGSDQAFVTAHGRLWAA*GPGPAC
Trigger: ACAGGCGGGCCCTGGTCCTCAAGCAGCCCATAGGCG...CCCATGGGCCGTCACAAAGGCTTGATCACTGCCTGGGCAGTGGCACAACCATCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp CGCAACACCTCCAGATGCACATTCGGTGTCTTCTGTGCTGAGCTGGCAGATGCCCCGCTGGCCGGGTCTTaGACGGGGAAGGTGGCGGCG +
Preference number: 4 (lower is better)
Translates to: RNTSRCTFGVFCAELADAPLAGS*TGKVAA
Trigger: CGCCGCCACCTTCCCCGTGCAAGACCCGGCCAGCGG...GGCATCTGCCAGCTCAGCACAGAAGACACCGAATGTGCATCTGGAGGTGTTGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672652.1
CDS-3UTR GCA 90 bp TTGGCAAAGCCACTGACAGTAGGCAAGGAAGGGCTGGGCGGTGCTGCTCGTAACCGCAGTCGGCTACCATaGCCAGAGCGGCGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: LAKPLTVGKEGLGGAARNRSRLP*PERRRW
Trigger: CCAGCGGCGCCGCTCTGGGCATGGTAGCCGACTGCG...GTTACGAGCAGCACCGCCCAGCCCTTCCTTGCCTACTGTCAGTGGCTTTGCCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp GCCAGGGCCAGGGCGGAGAAGGGCGTGTCTTCGGCAGGCTTCACCACGACAGTAGGCCCGCCTGTCCTTTaGCGGGGTGTGGATAATGTC +
Preference number: 4 (lower is better)
Translates to: ARARAEKGVSSAGFTTTVGPPVL*RGVDNV
Trigger: GACATTATCCACACCCCGGCAAAGGACAGGCGGGCC...TACTGTCGTGGTGAAGCCTGCCGAAGACACGCCCTTCTCCGCCCTGGCCCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672557.1
CDS-3UTR CCA 90 bp TGGGGAGCCAGGGCCTCATTCTGTAAACCCAGTGCTGGTTCTCTGGGAGTCTGCGCGGAGGCGGCAGCCTaGAAACGTCGACCCGAGGCG +
Preference number: 4 (lower is better)
Translates to: WGARASFCKPSAGSLGVCAEAAA*KRRPEA
Trigger: CGCCTCGGGTCGACGTTTCCAGGCTGCCGCCTCCGC...GCAGACTCCCAGAGAACCAGCACTGGGTTTACAGAATGAGGCCCTGGCTCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348925.2
ENST00000357578.8
CDS-3UTR CCA 90 bp TCTGCCGCAACACCTCCAGATGCACATTCGGTGTCTTCTGTGCTGAGCTGGCAGCCAGAGCGGCGCCGCTaGCCGGGTCTTGCACGGGGA +
Preference number: 4 (lower is better)
Translates to: SAATPPDAHSVSSVLSWQPERRR*PGLARG
Trigger: TCCCCGTGCAAGACCCGGCCAGCGGCGCCGCTCTGG...CTGCCAGCTCAGCACAGAAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672652.1
CDS-3UTR TCA 90 bp GGCCCGCCTGTCCTTTGCCGGGGTGTGGATAATGTCTCCGTAAACACGGCGGGCCCCCCACCTTCCGGGTaGTCATGGCACTGGGGAAAT +
Preference number: 4 (lower is better)
Translates to: GPPVLCRGVDNVSVNTAGPPPSG*SWHWGN
Trigger: ATTTCCCCAGTGCCATGATCACCCGGAAGGTGGGGG...GCCCGCCGTGTTTACGGAGACATTATCCACACCCCGGCAAAGGACAGGCGGGCC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000672557.1
CDS-3UTR GCA 90 bp TTGGCAAAGCCACTGACAGTAGGCAAGGAAGGGCTGGGCGGTGCTGCTCGTAACGCCACGCCTATGGGCTaGTTGAGGACCAGGGCCCGC +
Preference number: 4 (lower is better)
Translates to: LAKPLTVGKEGLGGAARNATPMG*LRTRAR
Trigger: GCGGGCCCTGGTCCTCAAGCAGCCCATAGGCGTGGC...GTTACGAGCAGCACCGCCCAGCCCTTCCTTGCCTACTGTCAGTGGCTTTGCCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp GAGCCAGGGCCTCATTCTGTAAACCCAGTGCTGGTTCTCTGGGAGTCTGCAGCCGACAGTACAGCCGGCTaGCAGGGCGGCCCCCACCTT +
Preference number: 4 (lower is better)
Translates to: EPGPHSVNPVLVLWESAADSTAG*QGGPHL
Trigger: AAGGTGGGGGCCGCCCTGGCAGCCGGCTGTACTGTC...GGCTGCAGACTCCCAGAGAACCAGCACTGGGTTTACAGAATGAGGCCCTGGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp GCTCTGGGCCCATGTTCTGTAGCGACATGGGGGATGGTTGTGCCACTGCCCAGGGCTGGGCCTGCCTTGTaGTGTGCCTGCTCTGAGGCA +
Preference number: 4 (lower is better)
Translates to: ALGPCSVATWGMVVPLPRAGPAL*CACSEA
Trigger: TGCCTCAGAGCAGGCACAGCACAAGGCAGGCCCAGC...CCTGGGCAGTGGCACAACCATCCCCCATGTCGCTACAGAACATGGGCCCAGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp GAGCCAGGGCCTCATTCTGTAAACCCAGTGCTGGTTCTCTGGGAGTCTGCAGCCGACGGCCCATGGGGCTaGGCCTGCCTTGTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: EPGPHSVNPVLVLWESAADGPWG*ACLVLC
Trigger: GCACAGCACAAGGCAGGCCCAGCCCCATGGGCCGTC...GGCTGCAGACTCCCAGAGAACCAGCACTGGGTTTACAGAATGAGGCCCTGGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp CAAGGTGCTCTGGGCCCATGTTCTGTAGCGACATGGGGGATGGTTGTGCCACTGGACGGCCCATGGGGCTaGGCCTGCCTTGTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: QGALGPCSVATWGMVVPLDGPWG*ACLVLC
Trigger: GCACAGCACAAGGCAGGCCCAGCCCCATGGGCCGTC...CAGTGGCACAACCATCCCCCATGTCGCTACAGAACATGGGCCCAGAGCACCTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp ACCCCTCTCGCCCAAGGCCGGACTGCTTCACTCCACCAAAAGGGCACTCCACAGTCAGGCTCAGGTCGGTaGGCAAGTGGGCACTGGCCT +
Preference number: 4 (lower is better)
Translates to: TPLAQGRTASLHQKGTPQSGSGR*ASGHWP
Trigger: AGGCCAGTGCCCACTTGCCCACCGACCTGAGCCTGA...CTGTGGAGTGCCCTTTTGGTGGAGTGAAGCAGTCCGGCCTTGGGCGAGAGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672652.1
CDS-3UTR TCA 90 bp CAAGGTGCTCTGGGCCCATGTTCTGTAGCGACATGGGGGATGGTTGTGCCACTGGTGCTGTGCCTGCTCTaGGGCAGCTGGGGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: QGALGPCSVATWGMVVPLVLCLL*GSWGCG
Trigger: ACCACAGCCCCAGCTGCCTCAGAGCAGGCACAGCAC...CAGTGGCACAACCATCCCCCATGTCGCTACAGAACATGGGCCCAGAGCACCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR TCA 90 bp GCTCTGGGCCCATGTTCTGTAGCGACATGGGGGATGGTTGTGCCACTGCCCAGGCCACTGCCCAGGCAGTaGTCAAGCCTTTGTGACGGC +
Preference number: 4 (lower is better)
Translates to: ALGPCSVATWGMVVPLPRPLPRQ*SSLCDG
Trigger: GCCGTCACAAAGGCTTGATCACTGCCTGGGCAGTGG...CCTGGGCAGTGGCACAACCATCCCCCATGTCGCTACAGAACATGGGCCCAGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp GAGCCAGGGCCTCATTCTGTAAACCCAGTGCTGGTTCTCTGGGAGTCTGCAGCCCCACGAAGCTGTCGGTaGGCAGCAGCGCCGCAGAGA +
Preference number: 4 (lower is better)
Translates to: EPGPHSVNPVLVLWESAAPRSCR*AAAPQR
Trigger: TCTCTGCGGCGCTGCTGCGCACCGACAGCTTCGTGG...GGCTGCAGACTCCCAGAGAACCAGCACTGGGTTTACAGAATGAGGCCCTGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672652.1
CDS-3UTR GCA 90 bp TTGTATACACCTGAAGGAATCCCAGCCTGGCTTGCAAGCTCAGCCAGGGCCAGGGCCACGCCTATGGGCTaGTTGAGGACCAGGGCCCGC +
Preference number: 4 (lower is better)
Translates to: LYTPEGIPAWLASSARARATPMG*LRTRAR
Trigger: GCGGGCCCTGGTCCTCAAGCAGCCCATAGGCGTGGC...CCTGGCCCTGGCTGAGCTTGCAAGCCAGGCTGGGATTCCTTCAGGTGTATACAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672557.1
CDS-3UTR GCA 90 bp TCTGGGCCCATGTTCTGTAGCGACATGGGGGATGGTTGTGCCACTGCCCAGGCACCACGGGGTGATGACTaGAGCCACGCCTATGGGCTG +
Preference number: 4 (lower is better)
Translates to: SGPMFCSDMGDGCATAQAPRGDD*SHAYGL
Trigger: CAGCCCATAGGCGTGGCTGCAGTCATCACCCCGTGG...TGCCTGGGCAGTGGCACAACCATCCCCCATGTCGCTACAGAACATGGGCCCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp TTGTGCCACTGCCCAGGCAGTGATCAAGCCTTTGTGACGGCCCATGGGGCTGGGGGTTCTCTGGGAGTCTaGAGCCACAGGCACGTGGCA +
Preference number: 4 (lower is better)
Translates to: LCHCPGSDQAFVTAHGAGGSLGV*SHRHVA
Trigger: TGCCACGTGCCTGTGGCTGCAGACTCCCAGAGAACC...CCCAGCCCCATGGGCCGTCACAAAGGCTTGATCACTGCCTGGGCAGTGGCACAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp GGATGGTTGTGCCACTGCCCAGGCAGTGATCAAGCCTTTGTGACGGCCCATGGGGCCTTGTGCTGTGCCTaGTCTGAGGCAGCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: GWLCHCPGSDQAFVTAHGALCCA*SEAAGA
Trigger: AGCCCCAGCTGCCTCAGAGCAGGCACAGCACAAGGC...CCCATGGGCCGTCACAAAGGCTTGATCACTGCCTGGGCAGTGGCACAACCATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp GGATGGTTGTGCCACTGCCCAGGCAGTGATCAAGCCTTTGTGACGGCCCATGGGAAATGCAGGTCGCCATaGCCCGGGCAACGACGGCGA +
Preference number: 4 (lower is better)
Translates to: GWLCHCPGSDQAFVTAHGKCRSP*PGQRRR
Trigger: TCGCCGTCGTTGCCCGGGCCATGGCGACCTGCATTT...CCCATGGGCCGTCACAAAGGCTTGATCACTGCCTGGGCAGTGGCACAACCATCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348925.2
ENST00000357578.8
3UTR CAA 72 bp GGTCGGTGGGCAAGTGGGCACTGGCCTCCTCCCATCTaGGCAAAGCCACTGACAGTAGGCAAGGAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: GRWASGHWPPPI*AKPLTVGKEGL
Trigger: CAGCCCTTCCTTGCCTACTGTCAGTGGCTTTGCCAAGATGGGAGGAGGCCAGTGCCCACTTGCCCACCGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR TCA 90 bp GAGCCAGGGCCTCATTCTGTAAACCCAGTGCTGGTTCTCTGGGAGTCTGCAGCCCGGTGTCTTCTGTGCTaGGCTGGCAGATGCCGGGGA +
Preference number: 4 (lower is better)
Translates to: EPGPHSVNPVLVLWESAARCLLC*AGRCRG
Trigger: TCCCCGGCATCTGCCAGCTCAGCACAGAAGACACCG...GGCTGCAGACTCCCAGAGAACCAGCACTGGGTTTACAGAATGAGGCCCTGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp GGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGCACATTCGGTGTCTTCTCGCAGTCGGCTACCATaGCCAGAGCGGCGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: GFTQTSAATPPDAHSVSSRSRLP*PERRRW
Trigger: CCAGCGGCGCCGCTCTGGGCATGGTAGCCGACTGCG...AGAAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp AGGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGCACATTCGGTGTCTTCCGCAGTCGGCTACCATaGCCAGAGCGGCGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: RVHSNLCRNTSRCTFGVFRSRLP*PERRRW
Trigger: CCAGCGGCGCCGCTCTGGGCATGGTAGCCGACTGCG...GAAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp CAAGGTGCTCTGGGCCCATGTTCTGTAGCGACATGGGGGATGGTTGTGCCACTGGCCTTGTGCTGTGCCTaGTCTGAGGCAGCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: QGALGPCSVATWGMVVPLALCCA*SEAAGA
Trigger: AGCCCCAGCTGCCTCAGAGCAGGCACAGCACAAGGC...CAGTGGCACAACCATCCCCCATGTCGCTACAGAACATGGGCCCAGAGCACCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp ACCTTGGGAATGTGGCTAGTACACTCCAGGCCAGATGCTAGGCAGCTCCCTGTGCCATGGGGCTGGGCCTaGCTTGTGCTGTGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: TLGMWLVHSRPDARQLPVPWGWA*LVLCLL
Trigger: GAGCAGGCACAGCACAAGGCAGGCCCAGCCCCATGG...CACAGGGAGCTGCCTAGCATCTGGCCTGGAGTGTACTAGCCACATTCCCAAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp GCTCTGGGCCCATGTTCTGTAGCGACATGGGGGATGGTTGTGCCACTGCCCAGGGGCCATGCCACTGCGTaGCTTCCATCCTACCAAGCT +
Preference number: 4 (lower is better)
Translates to: ALGPCSVATWGMVVPLPRGHATA*LPSYQA
Trigger: AGCTTGGTAGGATGGAAGGCACGCAGTGGCATGGCC...CCTGGGCAGTGGCACAACCATCCCCCATGTCGCTACAGAACATGGGCCCAGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp GCTCTGGGCCCATGTTCTGTAGCGACATGGGGGATGGTTGTGCCACTGCCCAGGATGAACTCCTCTCCTTaGCGGAGACCTCCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: ALGPCSVATWGMVVPLPRMNSSP*RRPPSS
Trigger: GCTGGAGGGAGGTCTCCGCCAAGGAGAGGAGTTCAT...CCTGGGCAGTGGCACAACCATCCCCCATGTCGCTACAGAACATGGGCCCAGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp CCGGGTGATCATGGCACTGGGGAAATTCCACGGGGTGATGACTGCAGCCACGCCGAAGGAATCCCAGCCTaGCTTGCAAGCTCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: PGDHGTGEIPRGDDCSHAEGIPA*LASSAR
Trigger: CCTGGCTGAGCTTGCAAGCCAGGCTGGGATTCCTTC...GGCGTGGCTGCAGTCATCACCCCGTGGAATTTCCCCAGTGCCATGATCACCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672557.1
CDS-3UTR CCA 90 bp GAGCCAGGGCCTCATTCTGTAAACCCAGTGCTGGTTCTCTGGGAGTCTGCAGCCCTTTGTGACGGCCCATaGGGCTGGGCCTGCCTTGTG +
Preference number: 4 (lower is better)
Translates to: EPGPHSVNPVLVLWESAALCDGP*GWACLV
Trigger: CACAAGGCAGGCCCAGCCCCATGGGCCGTCACAAAG...GGCTGCAGACTCCCAGAGAACCAGCACTGGGTTTACAGAATGAGGCCCTGGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp TTGTGCCACTGCCCAGGCAGTGATCAAGCCTTTGTGACGGCCCATGGGGCTGGGGGCCTCCCAAGGTGTTaGGATTACAGGCGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: LCHCPGSDQAFVTAHGAGGLPRC*DYRREP
Trigger: TGGCTCACGCCTGTAATCCCAACACCTTGGGAGGCC...CCCAGCCCCATGGGCCGTCACAAAGGCTTGATCACTGCCTGGGCAGTGGCACAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR TCA 90 bp TGGGGAGCCAGGGCCTCATTCTGTAAACCCAGTGCTGGTTCTCTGGGAGTCTGCCCCCCACCTTCCGGGTaGTCATGGCACTGGGGAAAT +
Preference number: 4 (lower is better)
Translates to: WGARASFCKPSAGSLGVCPPPSG*SWHWGN
Trigger: ATTTCCCCAGTGCCATGATCACCCGGAAGGTGGGGG...GCAGACTCCCAGAGAACCAGCACTGGGTTTACAGAATGAGGCCCTGGCTCCCCA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR TCA 90 bp TCTGCCGCAACACCTCCAGATGCACATTCGGTGTCTTCTGTGCTGAGCTGGCAGGTGATCAAGCCTTTGTaGCGGCCCATGGGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: SAATPPDAHSVSSVLSWQVIKPL*RPMGLG
Trigger: GCCCAGCCCCATGGGCCGTCACAAAGGCTTGATCAC...CTGCCAGCTCAGCACAGAAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR TCA 90 bp CGCAACACCTCCAGATGCACATTCGGTGTCTTCTGTGCTGAGCTGGCAGATGCCCGGTGTCTTCTGTGCTaGGCTGGCAGATGCCGGGGA +
Preference number: 4 (lower is better)
Translates to: RNTSRCTFGVFCAELADARCLLC*AGRCRG
Trigger: TCCCCGGCATCTGCCAGCTCAGCACAGAAGACACCG...GGCATCTGCCAGCTCAGCACAGAAGACACCGAATGTGCATCTGGAGGTGTTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR TCA 90 bp TCTGGGCCCATGTTCTGTAGCGACATGGGGGATGGTTGTGCCACTGCCCAGGCAGATCTCCTGATGTCGTaGTCTGCCTGCCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: SGPMFCSDMGDGCATAQADLLMS*SACLGL
Trigger: GAGGCCAAGGCAGGCAGATCACGACATCAGGAGATC...TGCCTGGGCAGTGGCACAACCATCCCCCATGTCGCTACAGAACATGGGCCCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp GAGGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGCACATTCGGTGTCTTGCCACGCCTATGGGCTaGTTGAGGACCAGGGCCCGC +
Preference number: 4 (lower is better)
Translates to: EGSLKPLPQHLQMHIRCLATPMG*LRTRAR
Trigger: GCGGGCCCTGGTCCTCAAGCAGCCCATAGGCGTGGC...AAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp AGGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGCACATTCGGTGTCTTCGCCACGCCTATGGGCTaGTTGAGGACCAGGGCCCGC +
Preference number: 4 (lower is better)
Translates to: RVHSNLCRNTSRCTFGVFATPMG*LRTRAR
Trigger: GCGGGCCCTGGTCCTCAAGCAGCCCATAGGCGTGGC...GAAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp AGCCACGCCTATGGGCTGCTTGAGGACCAGGGCCCGCCTGTCCTTTGCCGGGGTCCTTTTCACAGAGTTTaGTGCGTGGTGCAACAGGAT +
Preference number: 4 (lower is better)
Translates to: SHAYGLLEDQGPPVLCRGPFHRV*CVVQQD
Trigger: ATCCTGTTGCACCACGCAGCAAACTCTGTGAAAAGG...ACCCCGGCAAAGGACAGGCGGGCCCTGGTCCTCAAGCAGCCCATAGGCGTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672557.1
CDS-3UTR GCA 90 bp CAAGGTGCTCTGGGCCCATGTTCTGTAGCGACATGGGGGATGGTTGTGCCACTGCGCCCAAGGCCGGACTaGTTCACTCCACCAAAAGGG +
Preference number: 4 (lower is better)
Translates to: QGALGPCSVATWGMVVPLRPRPD*FTPPKG
Trigger: CCCTTTTGGTGGAGTGAAGCAGTCCGGCCTTGGGCG...CAGTGGCACAACCATCCCCCATGTCGCTACAGAACATGGGCCCAGAGCACCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp GCTCTGGGCCCATGTTCTGTAGCGACATGGGGGATGGTTGTGCCACTGCCCAGGAGAGGTGCTCCTTCGTaGCTCACAGAAGCACGGACA +
Preference number: 4 (lower is better)
Translates to: ALGPCSVATWGMVVPLPRRGAPS*LTEART
Trigger: TGTCCGTGCTTCTGTGAGGCACGAAGGAGCACCTCT...CCTGGGCAGTGGCACAACCATCCCCCATGTCGCTACAGAACATGGGCCCAGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp GAGCCAGGGCCTCATTCTGTAAACCCAGTGCTGGTTCTCTGGGAGTCTGCAGCCGAAGGAGCCAGGCCATaGCACTGCGTGCCTTCCATC +
Preference number: 4 (lower is better)
Translates to: EPGPHSVNPVLVLWESAAEGARP*HCVPSI
Trigger: GATGGAAGGCACGCAGTGGCATGGCCTGGCTCCTTC...GGCTGCAGACTCCCAGAGAACCAGCACTGGGTTTACAGAATGAGGCCCTGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp CAAGGTGCTCTGGGCCCATGTTCTGTAGCGACATGGGGGATGGTTGTGCCACTGGCCCCTGCTACAGCCTaGTCCACGTTGGCACTGTCA +
Preference number: 4 (lower is better)
Translates to: QGALGPCSVATWGMVVPLAPATA*STLALS
Trigger: TGACAGTGCCAACGTGGACCAGGCTGTAGCAGGGGC...CAGTGGCACAACCATCCCCCATGTCGCTACAGAACATGGGCCCAGAGCACCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp TGGGGAGCCAGGGCCTCATTCTGTAAACCCAGTGCTGGTTCTCTGGGAGTCTGCGCCCCTGCTACAGCCTaGTCCACGTTGGCACTGTCA +
Preference number: 4 (lower is better)
Translates to: WGARASFCKPSAGSLGVCAPATA*STLALS
Trigger: TGACAGTGCCAACGTGGACCAGGCTGTAGCAGGGGC...GCAGACTCCCAGAGAACCAGCACTGGGTTTACAGAATGAGGCCCTGGCTCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp GCTCTGGGCCCATGTTCTGTAGCGACATGGGGGATGGTTGTGCCACTGCCCAGGGCAGCCACAGGCACGTaGCACATATTGGTCCCTAGT +
Preference number: 4 (lower is better)
Translates to: ALGPCSVATWGMVVPLPRAATGT*HILVPS
Trigger: ACTAGGGACCAATATGTGCCACGTGCCTGTGGCTGC...CCTGGGCAGTGGCACAACCATCCCCCATGTCGCTACAGAACATGGGCCCAGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp TTGTGCCACTGCCCAGGCAGTGATCAAGCCTTTGTGACGGCCCATGGGGCTGGGGCAGCCACAGGCACGTaGCACATATTGGTCCCTAGT +
Preference number: 4 (lower is better)
Translates to: LCHCPGSDQAFVTAHGAGAATGT*HILVPS
Trigger: ACTAGGGACCAATATGTGCCACGTGCCTGTGGCTGC...CCCAGCCCCATGGGCCGTCACAAAGGCTTGATCACTGCCTGGGCAGTGGCACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp TTGTGCCACTGCCCAGGCAGTGATCAAGCCTTTGTGACGGCCCATGGGGCTGGGGGGACCTTGGGAATGTaGCTAGTACACTCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: LCHCPGSDQAFVTAHGAGGTLGM*LVHSRP
Trigger: TGGCCTGGAGTGTACTAGCCACATTCCCAAGGTCCC...CCCAGCCCCATGGGCCGTCACAAAGGCTTGATCACTGCCTGGGCAGTGGCACAA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp GACTGCAGCCACGCCTATGGGCTGCTTGAGGACCAGGGCCCGCCTGTCCTTTGCATGTGCCTCCTTCAGTaGCTTTCCCCTGGCACAATA +
Preference number: 4 (lower is better)
Translates to: DCSHAYGLLEDQGPPVLCMCLLQ*LSPGTI
Trigger: TATTGTGCCAGGGGAAAGCCACTGAAGGAGGCACAT...GCAAAGGACAGGCGGGCCCTGGTCCTCAAGCAGCCCATAGGCGTGGCTGCAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672557.1
CDS-3UTR TCA 90 bp GGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGCACATTCGGTGTCTTCTGTGCTGTGCCTGCTCTaGGGCAGCTGGGGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: GFTQTSAATPPDAHSVSSVLCLL*GSWGCG
Trigger: ACCACAGCCCCAGCTGCCTCAGAGCAGGCACAGCAC...AGAAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR TCA 90 bp CGCAACACCTCCAGATGCACATTCGGTGTCTTCTGTGCTGAGCTGGCAGATGCCCCACTGCCCAGGCAGTaGTCAAGCCTTTGTGACGGC +
Preference number: 4 (lower is better)
Translates to: RNTSRCTFGVFCAELADAPLPRQ*SSLCDG
Trigger: GCCGTCACAAAGGCTTGATCACTGCCTGGGCAGTGG...GGCATCTGCCAGCTCAGCACAGAAGACACCGAATGTGCATCTGGAGGTGTTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp AGGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGCACATTCGGTGTCTTCAGCTCCGCAGCCAAATaGAGGTCGCCATGGCCCGGG +
Preference number: 4 (lower is better)
Translates to: RVHSNLCRNTSRCTFGVFSSAAK*RSPWPG
Trigger: CCCGGGCCATGGCGACCTGCATTTGGCTGCGGAGCT...GAAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348925.2
ENST00000357578.8
CDS-3UTR GCA 90 bp TCAAACCTCTGCCGCAACACCTCCAGATGCACATTCGGTGTCTTCTGTGCTGAGCCACGAAGCTGTCGGTaGGCAGCAGCGCCGCAGAGA +
Preference number: 4 (lower is better)
Translates to: SNLCRNTSRCTFGVFCAEPRSCR*AAAPQR
Trigger: TCTCTGCGGCGCTGCTGCGCACCGACAGCTTCGTGG...CTCAGCACAGAAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGAGGTTTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672652.1
CDS-3UTR GCA 90 bp GGAATAACATTGTATACACCTGAAGGAATCCCAGCCTGGCTTGCAAGCTCAGCCCGCAGTCGGCTACCATaGCCAGAGCGGCGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: GITLYTPEGIPAWLASSARSRLP*PERRRW
Trigger: CCAGCGGCGCCGCTCTGGGCATGGTAGCCGACTGCG...GGCTGAGCTTGCAAGCCAGGCTGGGATTCCTTCAGGTGTATACAATGTTATTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672557.1
CDS-3UTR GCA 90 bp CGCAACACCTCCAGATGCACATTCGGTGTCTTCTGTGCTGAGCTGGCAGATGCCGGCCCGCCTGTCCTTTaGCGGGGTGTGGATAATGTC +
Preference number: 4 (lower is better)
Translates to: RNTSRCTFGVFCAELADAGPPVL*RGVDNV
Trigger: GACATTATCCACACCCCGGCAAAGGACAGGCGGGCC...GGCATCTGCCAGCTCAGCACAGAAGACACCGAATGTGCATCTGGAGGTGTTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp AAAGGCGGAATAGAGAATTTCTCCATGTGCCTCCTTCAGTGGCTTTCCCCTGGCGACAGTACAGCCGGCTaGCAGGGCGGCCCCCACCTT +
Preference number: 4 (lower is better)
Translates to: KGGIENFSMCLLQWLSPGDSTAG*QGGPHL
Trigger: AAGGTGGGGGCCGCCCTGGCAGCCGGCTGTACTGTC...GCCAGGGGAAAGCCACTGAAGGAGGCACATGGAGAAATTCTCTATTCCGCCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672557.1
CDS-3UTR GCA 90 bp GAGCCAGGGCCTCATTCTGTAAACCCAGTGCTGGTTCTCTGGGAGTCTGCAGCCAGATGCCATGGCCCCTaGTACAGCCTGGTCCACGTT +
Preference number: 4 (lower is better)
Translates to: EPGPHSVNPVLVLWESAARCHGP*YSLVHV
Trigger: AACGTGGACCAGGCTGTAGCAGGGGCCATGGCATCT...GGCTGCAGACTCCCAGAGAACCAGCACTGGGTTTACAGAATGAGGCCCTGGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp TCTGGGCCCATGTTCTGTAGCGACATGGGGGATGGTTGTGCCACTGCCCAGGCAATGCCCACTTCCAGCTaGTCTGCCACTCTCCAGATC +
Preference number: 4 (lower is better)
Translates to: SGPMFCSDMGDGCATAQAMPTSS*SATLQI
Trigger: GATCTGGAGAGTGGCAGAGCAGCTGGAAGTGGGCAT...TGCCTGGGCAGTGGCACAACCATCCCCCATGTCGCTACAGAACATGGGCCCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp TTGGCAAAGCCACTGACAGTAGGCAAGGAAGGGCTGGGCGGTGCTGCTCGTAACATGAACTCCTCTCCTTaGCGGAGACCTCCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: LAKPLTVGKEGLGGAARNMNSSP*RRPPSS
Trigger: GCTGGAGGGAGGTCTCCGCCAAGGAGAGGAGTTCAT...GTTACGAGCAGCACCGCCCAGCCCTTCCTTGCCTACTGTCAGTGGCTTTGCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp CGCAACACCTCCAGATGCACATTCGGTGTCTTCTGTGCTGAGCTGGCAGATGCCTCTTCTGTGCTGAGCTaGCAGATGCCGGGGAGGGGT +
Preference number: 4 (lower is better)
Translates to: RNTSRCTFGVFCAELADASSVLS*QMPGRG
Trigger: ACCCCTCCCCGGCATCTGCCAGCTCAGCACAGAAGA...GGCATCTGCCAGCTCAGCACAGAAGACACCGAATGTGCATCTGGAGGTGTTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp GAGCCAGGGCCTCATTCTGTAAACCCAGTGCTGGTTCTCTGGGAGTCTGCAGCCGGCCTCCCAAGGTGTTaGGATTACAGGCGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: EPGPHSVNPVLVLWESAAGLPRC*DYRREP
Trigger: TGGCTCACGCCTGTAATCCCAACACCTTGGGAGGCC...GGCTGCAGACTCCCAGAGAACCAGCACTGGGTTTACAGAATGAGGCCCTGGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp GAGCCAGGGCCTCATTCTGTAAACCCAGTGCTGGTTCTCTGGGAGTCTGCAGCCGTGATCTGCCTGCCTTaGCCTCCCAAGGTGTTGGGA +
Preference number: 4 (lower is better)
Translates to: EPGPHSVNPVLVLWESAAVICLP*PPKVLG
Trigger: TCCCAACACCTTGGGAGGCCAAGGCAGGCAGATCAC...GGCTGCAGACTCCCAGAGAACCAGCACTGGGTTTACAGAATGAGGCCCTGGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR TCA 90 bp CAGGCACGTGGCACATATTGGTCCCTAGTTACATTAAGGGCAGGGGTAGGATTTCGCCTATGGGCTGCTTaGGGACCAGGGCCCGCCTGT +
Preference number: 4 (lower is better)
Translates to: QARGTYWSLVTLRAGVGFRLWAA*GPGPAC
Trigger: ACAGGCGGGCCCTGGTCCTCAAGCAGCCCATAGGCG...AAATCCTACCCCTGCCCTTAATGTAACTAGGGACCAATATGTGCCACGTGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR TCA 90 bp GAGGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGCACATTCGGTGTCTTCGGTGTCTTCTGTGCTaGGCTGGCAGATGCCGGGGA +
Preference number: 4 (lower is better)
Translates to: EGSLKPLPQHLQMHIRCLRCLLC*AGRCRG
Trigger: TCCCCGGCATCTGCCAGCTCAGCACAGAAGACACCG...AAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp TCTGCCGCAACACCTCCAGATGCACATTCGGTGTCTTCTGTGCTGAGCTGGCAGAGATGCCATGGCCCCTaGTACAGCCTGGTCCACGTT +
Preference number: 4 (lower is better)
Translates to: SAATPPDAHSVSSVLSWQRCHGP*YSLVHV
Trigger: AACGTGGACCAGGCTGTAGCAGGGGCCATGGCATCT...CTGCCAGCTCAGCACAGAAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp TCAAACCTCTGCCGCAACACCTCCAGATGCACATTCGGTGTCTTCTGTGCTGAGGCTGGGCCTGCCTTGTaGTGTGCCTGCTCTGAGGCA +
Preference number: 4 (lower is better)
Translates to: SNLCRNTSRCTFGVFCAEAGPAL*CACSEA
Trigger: TGCCTCAGAGCAGGCACAGCACAAGGCAGGCCCAGC...CTCAGCACAGAAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGAGGTTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp GAGCCAGGGCCTCATTCTGTAAACCCAGTGCTGGTTCTCTGGGAGTCTGCAGCCAGAGGTGCTCCTTCGTaGCTCACAGAAGCACGGACA +
Preference number: 4 (lower is better)
Translates to: EPGPHSVNPVLVLWESAARGAPS*LTEART
Trigger: TGTCCGTGCTTCTGTGAGGCACGAAGGAGCACCTCT...GGCTGCAGACTCCCAGAGAACCAGCACTGGGTTTACAGAATGAGGCCCTGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp TGGGGAGCCAGGGCCTCATTCTGTAAACCCAGTGCTGGTTCTCTGGGAGTCTGCAGAGGTGCTCCTTCGTaGCTCACAGAAGCACGGACA +
Preference number: 4 (lower is better)
Translates to: WGARASFCKPSAGSLGVCRGAPS*LTEART
Trigger: TGTCCGTGCTTCTGTGAGGCACGAAGGAGCACCTCT...GCAGACTCCCAGAGAACCAGCACTGGGTTTACAGAATGAGGCCCTGGCTCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp GGATGGTTGTGCCACTGCCCAGGCAGTGATCAAGCCTTTGTGACGGCCCATGGGAGGAATAGGGAGAGGTaGTCCTTCGTGCCTCACAGA +
Preference number: 4 (lower is better)
Translates to: GWLCHCPGSDQAFVTAHGRNRER*SFVPHR
Trigger: TCTGTGAGGCACGAAGGAGCACCTCTCCCTATTCCT...CCCATGGGCCGTCACAAAGGCTTGATCACTGCCTGGGCAGTGGCACAACCATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp GCTCTGGGCCCATGTTCTGTAGCGACATGGGGGATGGTTGTGCCACTGCCCAGGGTGTGCCCAGGGTCTTaGCAGACCTTTAGTTACTCA +
Preference number: 4 (lower is better)
Translates to: ALGPCSVATWGMVVPLPRVCPGS*QTFSYS
Trigger: TGAGTAACTAAAGGTCTGGCAAGACCCTGGGCACAC...CCTGGGCAGTGGCACAACCATCCCCCATGTCGCTACAGAACATGGGCCCAGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp GAGGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGCACATTCGGTGTCTTAAATGCAGGTCGCCATaGCCCGGGCAACGACGGCGA +
Preference number: 4 (lower is better)
Translates to: EGSLKPLPQHLQMHIRCLKCRSP*PGQRRR
Trigger: TCGCCGTCGTTGCCCGGGCCATGGCGACCTGCATTT...AAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348925.2
ENST00000357578.8
CDS-3UTR CCA 90 bp ACCTTGGGAATGTGGCTAGTACACTCCAGGCCAGATGCTAGGCAGCTCCCTGTGGAAGGAATCCCAGCCTaGCTTGCAAGCTCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: TLGMWLVHSRPDARQLPVEGIPA*LASSAR
Trigger: CCTGGCTGAGCTTGCAAGCCAGGCTGGGATTCCTTC...CACAGGGAGCTGCCTAGCATCTGGCCTGGAGTGTACTAGCCACATTCCCAAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357578.8
CDS-3UTR CCA 90 bp TCAAACCTCTGCCGCAACACCTCCAGATGCACATTCGGTGTCTTCTGTGCTGAGAGGTCGGTGGGCAAGTaGGCACTGGCCTCCTCCCAT +
Preference number: 4 (lower is better)
Translates to: SNLCRNTSRCTFGVFCAERSVGK*ALASSH
Trigger: ATGGGAGGAGGCCAGTGCCCACTTGCCCACCGACCT...CTCAGCACAGAAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGAGGTTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp GGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGCACATTCGGTGTCTTCTTCAGGCTCAGGTCGGTaGGCAAGTGGGCACTGGCCT +
Preference number: 4 (lower is better)
Translates to: GFTQTSAATPPDAHSVSSSGSGR*ASGHWP
Trigger: AGGCCAGTGCCCACTTGCCCACCGACCTGAGCCTGA...AGAAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp AGGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGCACATTCGGTGTCTTCTCAGGCTCAGGTCGGTaGGCAAGTGGGCACTGGCCT +
Preference number: 4 (lower is better)
Translates to: RVHSNLCRNTSRCTFGVFSGSGR*ASGHWP
Trigger: AGGCCAGTGCCCACTTGCCCACCGACCTGAGCCTGA...GAAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR TCA 90 bp GTGATTCTTGACAGGGCCGGGGCACTGTCACTAGGAGATGAATTTCAGCTCTTCCGGTGTCTTCTGTGCTaGGCTGGCAGATGCCGGGGA +
Preference number: 4 (lower is better)
Translates to: VILDRAGALSLGDEFQLFRCLLC*AGRCRG
Trigger: TCCCCGGCATCTGCCAGCTCAGCACAGAAGACACCG...GAAGAGCTGAAATTCATCTCCTAGTGACAGTGCCCCGGCCCTGTCAAGAATCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR TCA 90 bp AGGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGCACATTCGGTGTCTTCTGGGATGGGAGGTGCTaGACACACGCCCAAGGCAAC +
Preference number: 4 (lower is better)
Translates to: RVHSNLCRNTSRCTFGVFWDGRC*THAQGN
Trigger: GTTGCCTTGGGCGTGTGTTCAGCACCTCCCATCCCA...GAAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR TCA 90 bp GGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGCACATTCGGTGTCTTCTTGGGATGGGAGGTGCTaGACACACGCCCAAGGCAAC +
Preference number: 4 (lower is better)
Translates to: GFTQTSAATPPDAHSVSSWDGRC*THAQGN
Trigger: GTTGCCTTGGGCGTGTGTTCAGCACCTCCCATCCCA...AGAAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR TCA 90 bp TCTGCCGCAACACCTCCAGATGCACATTCGGTGTCTTCTGTGCTGAGCTGGCAGTTGCTCTTTTGGAGGTaGGGGAGCAGCACCACACCA +
Preference number: 4 (lower is better)
Translates to: SAATPPDAHSVSSVLSWQLLFWR*GSSTTP
Trigger: TGGTGTGGTGCTGCTCCCTCACCTCCAAAAGAGCAA...CTGCCAGCTCAGCACAGAAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR TCA 90 bp ACCTTGGGAATGTGGCTAGTACACTCCAGGCCAGATGCTAGGCAGCTCCCTGTGTTGCTCTTTTGGAGGTaGGGGAGCAGCACCACACCA +
Preference number: 4 (lower is better)
Translates to: TLGMWLVHSRPDARQLPVLLFWR*GSSTTP
Trigger: TGGTGTGGTGCTGCTCCCTCACCTCCAAAAGAGCAA...CACAGGGAGCTGCCTAGCATCTGGCCTGGAGTGTACTAGCCACATTCCCAAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp AGGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGCACATTCGGTGTCTTCGGCCCGCCTGTCCTTTaGCGGGGTGTGGATAATGTC +
Preference number: 4 (lower is better)
Translates to: RVHSNLCRNTSRCTFGVFGPPVL*RGVDNV
Trigger: GACATTATCCACACCCCGGCAAAGGACAGGCGGGCC...GAAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp ATCGCTGGGAAGTTCCTGCTGAGAACTCACGGTAGCTATGCCAGAAAAGTACTTGCCACGCCTATGGGCTaGTTGAGGACCAGGGCCCGC +
Preference number: 4 (lower is better)
Translates to: IAGKFLLRTHGSYARKVLATPMG*LRTRAR
Trigger: GCGGGCCCTGGTCCTCAAGCAGCCCATAGGCGTGGC...AAGTACTTTTCTGGCATAGCTACCGTGAGTTCTCAGCAGGAACTTCCCAGCGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp GCTCTGGGCCCATGTTCTGTAGCGACATGGGGGATGGTTGTGCCACTGCCCAGGGAGTTTGCTGCGTGGTaGAACAGGATCTTTCCTGTA +
Preference number: 4 (lower is better)
Translates to: ALGPCSVATWGMVVPLPREFAAW*NRIFPV
Trigger: TACAGGAAAGATCCTGTTGCACCACGCAGCAAACTC...CCTGGGCAGTGGCACAACCATCCCCCATGTCGCTACAGAACATGGGCCCAGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672652.1
CDS-3UTR GCA 90 bp AGGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGCACATTCGGTGTCTTCCGCCCAAGGCCGGACTaGTTCACTCCACCAAAAGGG +
Preference number: 4 (lower is better)
Translates to: RVHSNLCRNTSRCTFGVFRPRPD*FTPPKG
Trigger: CCCTTTTGGTGGAGTGAAGCAGTCCGGCCTTGGGCG...GAAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp AGGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGCACATTCGGTGTCTTCGCCAGGCCATGCCACTaGGTGCCTTCCATCCTACCA +
Preference number: 4 (lower is better)
Translates to: RVHSNLCRNTSRCTFGVFARPCH*VPSILP
Trigger: TGGTAGGATGGAAGGCACGCAGTGGCATGGCCTGGC...GAAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp GGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGCACATTCGGTGTCTTCTGAAGGAGCCAGGCCATaGCACTGCGTGCCTTCCATC +
Preference number: 4 (lower is better)
Translates to: GFTQTSAATPPDAHSVSSEGARP*HCVPSI
Trigger: GATGGAAGGCACGCAGTGGCATGGCCTGGCTCCTTC...AGAAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp AGGTGCTCTGGGCCCATGTTCTGTAGCGACATGGGGGATGGTTGTGCCACTGCCATGGGGAAAGGAAGGTaGTTCGTCTCCACCTACTTG +
Preference number: 4 (lower is better)
Translates to: RCSGPMFCSDMGDGCATAMGKGR*FVSTYL
Trigger: CAAGTAGGTGGAGACGAAGCACCTTCCTTTCCCCAT...GGCAGTGGCACAACCATCCCCCATGTCGCTACAGAACATGGGCCCAGAGCACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp GCTCTGGGCCCATGTTCTGTAGCGACATGGGGGATGGTTGTGCCACTGCCCAGGACAGAGTTTGCTGCGTaGTGCAACAGGATCTTTCCT +
Preference number: 4 (lower is better)
Translates to: ALGPCSVATWGMVVPLPRTEFAA*CNRIFP
Trigger: AGGAAAGATCCTGTTGCACCACGCAGCAAACTCTGT...CCTGGGCAGTGGCACAACCATCCCCCATGTCGCTACAGAACATGGGCCCAGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672652.1
CDS-3UTR CCA 90 bp CCGGGTGATCATGGCACTGGGGAAATTCCACGGGGTGATGACTGCAGCCACGCCACAGAGTTTGCTGCGTaGTGCAACAGGATCTTTCCT +
Preference number: 4 (lower is better)
Translates to: PGDHGTGEIPRGDDCSHATEFAA*CNRIFP
Trigger: AGGAAAGATCCTGTTGCACCACGCAGCAAACTCTGT...GGCGTGGCTGCAGTCATCACCCCGTGGAATTTCCCCAGTGCCATGATCACCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672557.1
CDS-3UTR CCA 90 bp TCTGCCGCAACACCTCCAGATGCACATTCGGTGTCTTCTGTGCTGAGCTGGCAGCATCAATGCCATACTTaGACCCCTCTCGCCCAAGGC +
Preference number: 4 (lower is better)
Translates to: SAATPPDAHSVSSVLSWQHQCHT*TPLAQG
Trigger: GCCTTGGGCGAGAGGGGTCCAAGTATGGCATTGATG...CTGCCAGCTCAGCACAGAAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp GTGATTCTTGACAGGGCCGGGGCACTGTCACTAGGAGATGAATTTCAGCTCTTCCTTTGTGACGGCCCATaGGGCTGGGCCTGCCTTGTG +
Preference number: 4 (lower is better)
Translates to: VILDRAGALSLGDEFQLFLCDGP*GWACLV
Trigger: CACAAGGCAGGCCCAGCCCCATGGGCCGTCACAAAG...GAAGAGCTGAAATTCATCTCCTAGTGACAGTGCCCCGGCCCTGTCAAGAATCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp AGGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGCACATTCGGTGTCTTCTCTTCTGTGCTGAGCTaGCAGATGCCGGGGAGGGGT +
Preference number: 4 (lower is better)
Translates to: RVHSNLCRNTSRCTFGVFSSVLS*QMPGRG
Trigger: ACCCCTCCCCGGCATCTGCCAGCTCAGCACAGAAGA...GAAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp GTGATTCTTGACAGGGCCGGGGCACTGTCACTAGGAGATGAATTTCAGCTCTTCAGGTCGGTGGGCAAGTaGGCACTGGCCTCCTCCCAT +
Preference number: 4 (lower is better)
Translates to: VILDRAGALSLGDEFQLFRSVGK*ALASSH
Trigger: ATGGGAGGAGGCCAGTGCCCACTTGCCCACCGACCT...GAAGAGCTGAAATTCATCTCCTAGTGACAGTGCCCCGGCCCTGTCAAGAATCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp AGGTGCTCTGGGCCCATGTTCTGTAGCGACATGGGGGATGGTTGTGCCACTGCCTCGTCTCCACCTACTTaGCCGCCTAATTGGATTTGC +
Preference number: 4 (lower is better)
Translates to: RCSGPMFCSDMGDGCATASSPPT*PPNWIC
Trigger: GCAAATCCAATTAGGCGGCCAAGTAGGTGGAGACGA...GGCAGTGGCACAACCATCCCCCATGTCGCTACAGAACATGGGCCCAGAGCACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp TTGTGCCACTGCCCAGGCAGTGATCAAGCCTTTGTGACGGCCCATGGGGCTGGGGAAGGAATCCCAGCCTaGCTTGCAAGCTATAAAGAG +
Preference number: 4 (lower is better)
Translates to: LCHCPGSDQAFVTAHGAGEGIPA*LASYKE
Trigger: CTCTTTATAGCTTGCAAGCCAGGCTGGGATTCCTTC...CCCAGCCCCATGGGCCGTCACAAAGGCTTGATCACTGCCTGGGCAGTGGCACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672652.1
CDS-3UTR TCA 90 bp GTGATTCTTGACAGGGCCGGGGCACTGTCACTAGGAGATGAATTTCAGCTCTTCCCCCCACCTTCCGGGTaGTCATGGCACTGGGGAAAT +
Preference number: 4 (lower is better)
Translates to: VILDRAGALSLGDEFQLFPPPSG*SWHWGN
Trigger: ATTTCCCCAGTGCCATGATCACCCGGAAGGTGGGGG...GAAGAGCTGAAATTCATCTCCTAGTGACAGTGCCCCGGCCCTGTCAAGAATCAC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR TCA 90 bp TCTGGGCCCATGTTCTGTAGCGACATGGGGGATGGTTGTGCCACTGCCCAGGCAGTCTTTCTTTCAAAGTaGGAGGCAACGCCGGTCATA +
Preference number: 4 (lower is better)
Translates to: SGPMFCSDMGDGCATAQAVFLSK*EATPVI
Trigger: TATGACCGGCGTTGCCTCTCACTTTGAAAGAAAGAC...TGCCTGGGCAGTGGCACAACCATCCCCCATGTCGCTACAGAACATGGGCCCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR TCA 90 bp AGGTGCTCTGGGCCCATGTTCTGTAGCGACATGGGGGATGGTTGTGCCACTGCCTTCCCAGTGGCTCAATaGGGGATGTTAAATCCTAGG +
Preference number: 4 (lower is better)
Translates to: RCSGPMFCSDMGDGCATAFPVAQ*GMLNPR
Trigger: CCTAGGATTTAACATCCCTCATTGAGCCACTGGGAA...GGCAGTGGCACAACCATCCCCCATGTCGCTACAGAACATGGGCCCAGAGCACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR TCA 90 bp TTGGCAAAGCCACTGACAGTAGGCAAGGAAGGGCTGGGCGGTGCTGCTCGTAACAAAATGCTGAGTATGTaGTTCTTGACAGGGCCGGGG +
Preference number: 4 (lower is better)
Translates to: LAKPLTVGKEGLGGAARNKMLSM*FLTGPG
Trigger: CCCCGGCCCTGTCAAGAATCACATACTCAGCATTTT...GTTACGAGCAGCACCGCCCAGCCCTTCCTTGCCTACTGTCAGTGGCTTTGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp TTCACTCAAACCTCTGCCGCAACACCTCCAGATGCACATTCGGTGTCTTCTGTGGGCCCGCCTGTCCTTTaGCGGGGTGTGGATAATGTC +
Preference number: 4 (lower is better)
Translates to: FTQTSAATPPDAHSVSSVGPPVL*RGVDNV
Trigger: GACATTATCCACACCCCGGCAAAGGACAGGCGGGCC...CACAGAAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp CAGGCACGTGGCACATATTGGTCCCTAGTTACATTAAGGGCAGGGGTAGGATTTCCACGGGGTGATGACTaGAGCCACGCCTATGGGCTG +
Preference number: 4 (lower is better)
Translates to: QARGTYWSLVTLRAGVGFPRGDD*SHAYGL
Trigger: CAGCCCATAGGCGTGGCTGCAGTCATCACCCCGTGG...AAATCCTACCCCTGCCCTTAATGTAACTAGGGACCAATATGTGCCACGTGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp CGGAATAGAGAATTTCTCCATGTGCCTCCTTCAGTGGCTTTCCCCTGGCACAATCCACGGGGTGATGACTaGAGCCACGCCTATGGGCTG +
Preference number: 4 (lower is better)
Translates to: RNREFLHVPPSVAFPWHNPRGDD*SHAYGL
Trigger: CAGCCCATAGGCGTGGCTGCAGTCATCACCCCGTGG...ATTGTGCCAGGGGAAAGCCACTGAAGGAGGCACATGGAGAAATTCTCTATTCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672557.1
CDS-3UTR GCA 90 bp CCACAACCCAGAATAACCACAAGATGTAAGTGGAGTCTACACAGACAGAGATGGGACAGTACAGCCGGCTaGCAGGGCGGCCCCCACCTT +
Preference number: 4 (lower is better)
Translates to: PQPRITTRCKWSLHRQRWDSTAG*QGGPHL
Trigger: AAGGTGGGGGCCGCCCTGGCAGCCGGCTGTACTGTC...CCATCTCTGTCTGTGTAGACTCCACTTACATCTTGTGGTTATTCTGGGTTGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp GGATGGTTGTGCCACTGCCCAGGCAGTGATCAAGCCTTTGTGACGGCCCATGGGCCTTTTCACAGAGTTTaGTGCGTGGTGCAACAGGAT +
Preference number: 4 (lower is better)
Translates to: GWLCHCPGSDQAFVTAHGPFHRV*CVVQQD
Trigger: ATCCTGTTGCACCACGCAGCAAACTCTGTGAAAAGG...CCCATGGGCCGTCACAAAGGCTTGATCACTGCCTGGGCAGTGGCACAACCATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp GGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGCACATTCGGTGTCTTCTAGATGCCATGGCCCCTaGTACAGCCTGGTCCACGTT +
Preference number: 4 (lower is better)
Translates to: GFTQTSAATPPDAHSVSSRCHGP*YSLVHV
Trigger: AACGTGGACCAGGCTGTAGCAGGGGCCATGGCATCT...AGAAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp AGGTGCTCTGGGCCCATGTTCTGTAGCGACATGGGGGATGGTTGTGCCACTGCCGTTCCTAAATTTAGATaGCATGGCCCCTGCTACAGC +
Preference number: 4 (lower is better)
Translates to: RCSGPMFCSDMGDGCATAVPKFR*HGPCYS
Trigger: GCTGTAGCAGGGGCCATGGCATCTAAATTTAGGAAC...GGCAGTGGCACAACCATCCCCCATGTCGCTACAGAACATGGGCCCAGAGCACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp CAAGGTGCTCTGGGCCCATGTTCTGTAGCGACATGGGGGATGGTTGTGCCACTGGAACTTGATAACTGGTaGCAGAGGCCCGAAAGTCTC +
Preference number: 4 (lower is better)
Translates to: QGALGPCSVATWGMVVPLELDNW*QRPESL
Trigger: GAGACTTTCGGGCCTCTGGCACCAGTTATCAAGTTC...CAGTGGCACAACCATCCCCCATGTCGCTACAGAACATGGGCCCAGAGCACCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp GGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGCACATTCGGTGTCTTCTCACTTCCAGCTGCTCTaGCACTCTCCAGATCTGGGC +
Preference number: 4 (lower is better)
Translates to: GFTQTSAATPPDAHSVSSHFQLL*HSPDLG
Trigger: GCCCAGATCTGGAGAGTGGCAGAGCAGCTGGAAGTG...AGAAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp AGGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGCACATTCGGTGTCTTCCACTTCCAGCTGCTCTaGCACTCTCCAGATCTGGGC +
Preference number: 4 (lower is better)
Translates to: RVHSNLCRNTSRCTFGVFHFQLL*HSPDLG
Trigger: GCCCAGATCTGGAGAGTGGCAGAGCAGCTGGAAGTG...GAAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp AGGTGCTCTGGGCCCATGTTCTGTAGCGACATGGGGGATGGTTGTGCCACTGCCCCAGATACTCATCAATaGCATACTTGGACCCCTCTC +
Preference number: 4 (lower is better)
Translates to: RCSGPMFCSDMGDGCATAPDTHQ*HTWTPL
Trigger: GAGAGGGGTCCAAGTATGGCATTGATGAGTATCTGG...GGCAGTGGCACAACCATCCCCCATGTCGCTACAGAACATGGGCCCAGAGCACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp AGGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGCACATTCGGTGTCTTCGGATGGTTGTGCCACTaGCCAGGCAGTGATCAAGCC +
Preference number: 4 (lower is better)
Translates to: RVHSNLCRNTSRCTFGVFGWLCH*PGSDQA
Trigger: GGCTTGATCACTGCCTGGGCAGTGGCACAACCATCC...GAAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp GGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGCACATTCGGTGTCTTCTGGATGGTTGTGCCACTaGCCAGGCAGTGATCAAGCC +
Preference number: 4 (lower is better)
Translates to: GFTQTSAATPPDAHSVSSGWLCH*PGSDQA
Trigger: GGCTTGATCACTGCCTGGGCAGTGGCACAACCATCC...AGAAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp GAGCCAGGGCCTCATTCTGTAAACCCAGTGCTGGTTCTCTGGGAGTCTGCAGCCCGCAACACCTCCAGATaGACATTCGGTGTCTTCTGT +
Preference number: 4 (lower is better)
Translates to: EPGPHSVNPVLVLWESAARNTSR*TFGVFC
Trigger: ACAGAAGACACCGAATGTGCATCTGGAGGTGTTGCG...GGCTGCAGACTCCCAGAGAACCAGCACTGGGTTTACAGAATGAGGCCCTGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp TTGGCAAAGCCACTGACAGTAGGCAAGGAAGGGCTGGGCGGTGCTGCTCGTAACCGCAACACCTCCAGATaGACATTCGGTGTCTTCTGT +
Preference number: 4 (lower is better)
Translates to: LAKPLTVGKEGLGGAARNRNTSR*TFGVFC
Trigger: ACAGAAGACACCGAATGTGCATCTGGAGGTGTTGCG...GTTACGAGCAGCACCGCCCAGCCCTTCCTTGCCTACTGTCAGTGGCTTTGCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp TCTGCCGCAACACCTCCAGATGCACATTCGGTGTCTTCTGTGCTGAGCTGGCAGGTTCACTCAAACCTCTaGCGCAACACCTCCAGATGC +
Preference number: 4 (lower is better)
Translates to: SAATPPDAHSVSSVLSWQVHSNL*RNTSRC
Trigger: GCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAAC...CTGCCAGCTCAGCACAGAAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp ACCTTGGGAATGTGGCTAGTACACTCCAGGCCAGATGCTAGGCAGCTCCCTGTGAGGAATAGGGAGAGGTaGTCCTTCGTGCCTCACAGA +
Preference number: 4 (lower is better)
Translates to: TLGMWLVHSRPDARQLPVRNRER*SFVPHR
Trigger: TCTGTGAGGCACGAAGGAGCACCTCTCCCTATTCCT...CACAGGGAGCTGCCTAGCATCTGGCCTGGAGTGTACTAGCCACATTCCCAAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp TGGGGAGCCAGGGCCTCATTCTGTAAACCCAGTGCTGGTTCTCTGGGAGTCTGCATGGGGAAAGGAAGGTaGTTCGTCTCCACCTACTTG +
Preference number: 4 (lower is better)
Translates to: WGARASFCKPSAGSLGVCMGKGR*FVSTYL
Trigger: CAAGTAGGTGGAGACGAAGCACCTTCCTTTCCCCAT...GCAGACTCCCAGAGAACCAGCACTGGGTTTACAGAATGAGGCCCTGGCTCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp AGGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGCACATTCGGTGTCTTCGTGATCTCTGCTCACTaGAAGCTCCGCCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: RVHSNLCRNTSRCTFGVFVISAH*KLRLLG
Trigger: ACCCAGGAGGCGGAGCTTGCAGTGAGCAGAGATCAC...GAAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp GGATGGTTGTGCCACTGCCCAGGCAGTGATCAAGCCTTTGTGACGGCCCATGGGAATCCCAGCCTGGCTTaGAAGCAACAATGGATCCAA +
Preference number: 4 (lower is better)
Translates to: GWLCHCPGSDQAFVTAHGNPSLA*KQQWIQ
Trigger: TTGGATCCATTGTTGCTTGCAAGCCAGGCTGGGATT...CCCATGGGCCGTCACAAAGGCTTGATCACTGCCTGGGCAGTGGCACAACCATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348925.2
CDS-3UTR CCA 90 bp AAGTGGAGTCTACACAGACAGAGATGGGGAAAGGAAGGTGCTTCGTCTCCACCTGCCCCTGCTACAGCCTaGTCCACGTTGGCACTGTCA +
Preference number: 4 (lower is better)
Translates to: KWSLHRQRWGKEGASSPPAPATA*STLALS
Trigger: TGACAGTGCCAACGTGGACCAGGCTGTAGCAGGGGC...AGGTGGAGACGAAGCACCTTCCTTTCCCCATCTCTGTCTGTGTAGACTCCACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp TCTGGGCCCATGTTCTGTAGCGACATGGGGGATGGTTGTGCCACTGCCCAGGCAGCAGGTTCTTCTTCATaGCCTCGGCGAATGCTTTTA +
Preference number: 4 (lower is better)
Translates to: SGPMFCSDMGDGCATAQAAGSSS*PRRMLL
Trigger: TAAAAGCATTCGCCGAGGCCATGAAGAAGAACCTGC...TGCCTGGGCAGTGGCACAACCATCCCCCATGTCGCTACAGAACATGGGCCCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp TTATTGTCTTTGAAAGAGGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGGACGGCCCATGGGGCTaGGCCTGCCTTGTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: LLSLKEGSLKPLPQHLQMDGPWG*ACLVLC
Trigger: GCACAGCACAAGGCAGGCCCAGCCCCATGGGCCGTC...CATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCCTCTTTCAAAGACAATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp TCTGCCAAGAAAGCAGTCCCAGACAATACCATAAATGAATGGGTGTGGCTATGCGACGGCCCATGGGGCTaGGCCTGCCTTGTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: SAKKAVPDNTINEWVWLCDGPWG*ACLVLC
Trigger: GCACAGCACAAGGCAGGCCCAGCCCCATGGGCCGTC...GCATAGCCACACCCATTCATTTATGGTATTGTCTGGGACTGCTTTCTTGGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp CAGGCACGTGGCACATATTGGTCCCTAGTTACATTAAGGGCAGGGGTAGGATTTCTTTGTGACGGCCCATaGGGCTGGGCCTGCCTTGTG +
Preference number: 4 (lower is better)
Translates to: QARGTYWSLVTLRAGVGFLCDGP*GWACLV
Trigger: CACAAGGCAGGCCCAGCCCCATGGGCCGTCACAAAG...AAATCCTACCCCTGCCCTTAATGTAACTAGGGACCAATATGTGCCACGTGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR TCA 90 bp CCACAACCCAGAATAACCACAAGATGTAAGTGGAGTCTACACAGACAGAGATGGGTGCTGTGCCTGCTCTaGGGCAGCTGGGGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: PQPRITTRCKWSLHRQRWVLCLL*GSWGCG
Trigger: ACCACAGCCCCAGCTGCCTCAGAGCAGGCACAGCAC...CCATCTCTGTCTGTGTAGACTCCACTTACATCTTGTGGTTATTCTGGGTTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR TCA 90 bp GTGATTCTTGACAGGGCCGGGGCACTGTCACTAGGAGATGAATTTCAGCTCTTCGATCTCCTGATGTCGTaGTCTGCCTGCCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: VILDRAGALSLGDEFQLFDLLMS*SACLGL
Trigger: GAGGCCAAGGCAGGCAGATCACGACATCAGGAGATC...GAAGAGCTGAAATTCATCTCCTAGTGACAGTGCCCCGGCCCTGTCAAGAATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp TGCCTCTTCTACAAAGTGGGTTGGCAATTACAGAAATTCTTTCCCTTTTGGGTTCCGCTGGCCGGGTCTTaGACGGGGAAGGTGGCGGCG +
Preference number: 4 (lower is better)
Translates to: CLFYKVGWQLQKFFPFWVPLAGS*TGKVAA
Trigger: CGCCGCCACCTTCCCCGTGCAAGACCCGGCCAGCGG...AACCCAAAAGGGAAAGAATTTCTGTAATTGCCAACCCACTTTGTAGAAGAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357578.8
ENST00000672652.1
CDS-3UTR GCA 90 bp GTGCTATTTATTGTCTTTGAAAGAGGGTTCACTCAAACCTCTGCCGCAACACCTGACAGTACAGCCGGCTaGCAGGGCGGCCCCCACCTT +
Preference number: 4 (lower is better)
Translates to: VLFIVFERGFTQTSAATPDSTAG*QGGPHL
Trigger: AAGGTGGGGGCCGCCCTGGCAGCCGGCTGTACTGTC...AGGTGTTGCGGCAGAGGTTTGAGTGAACCCTCTTTCAAAGACAATAAATAGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp TTCACTCAAACCTCTGCCGCAACACCTCCAGATGCACATTCGGTGTCTTCTGTGAGATGCCATGGCCCCTaGTACAGCCTGGTCCACGTT +
Preference number: 4 (lower is better)
Translates to: FTQTSAATPPDAHSVSSVRCHGP*YSLVHV
Trigger: AACGTGGACCAGGCTGTAGCAGGGGCCATGGCATCT...CACAGAAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp GAGCCAGGGCCTCATTCTGTAAACCCAGTGCTGGTTCTCTGGGAGTCTGCAGCCGTTCCTAAATTTAGATaGCATGGCCCCTGCTACAGC +
Preference number: 4 (lower is better)
Translates to: EPGPHSVNPVLVLWESAAVPKFR*HGPCYS
Trigger: GCTGTAGCAGGGGCCATGGCATCTAAATTTAGGAAC...GGCTGCAGACTCCCAGAGAACCAGCACTGGGTTTACAGAATGAGGCCCTGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp GAGCCAGGGCCTCATTCTGTAAACCCAGTGCTGGTTCTCTGGGAGTCTGCAGCCCATGGCCTCGGCGAATaGTTTTACAAAGGCATCATG +
Preference number: 4 (lower is better)
Translates to: EPGPHSVNPVLVLWESAAHGLGE*FYKGIM
Trigger: CATGATGCCTTTGTAAAAGCATTCGCCGAGGCCATG...GGCTGCAGACTCCCAGAGAACCAGCACTGGGTTTACAGAATGAGGCCCTGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp TTCACTCAAACCTCTGCCGCAACACCTCCAGATGCACATTCGGTGTCTTCTGTGCACTTCCAGCTGCTCTaGCACTCTCCAGATCTGGGC +
Preference number: 4 (lower is better)
Translates to: FTQTSAATPPDAHSVSSVHFQLL*HSPDLG
Trigger: GCCCAGATCTGGAGAGTGGCAGAGCAGCTGGAAGTG...CACAGAAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp CAGGCACGTGGCACATATTGGTCCCTAGTTACATTAAGGGCAGGGGTAGGATTTCGCCCAAGGCCGGACTaGTTCACTCCACCAAAAGGG +
Preference number: 4 (lower is better)
Translates to: QARGTYWSLVTLRAGVGFRPRPD*FTPPKG
Trigger: CCCTTTTGGTGGAGTGAAGCAGTCCGGCCTTGGGCG...AAATCCTACCCCTGCCCTTAATGTAACTAGGGACCAATATGTGCCACGTGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp GAGCCAGGGCCTCATTCTGTAAACCCAGTGCTGGTTCTCTGGGAGTCTGCAGCCCCAGATACTCATCAATaGCATACTTGGACCCCTCTC +
Preference number: 4 (lower is better)
Translates to: EPGPHSVNPVLVLWESAAPDTHQ*HTWTPL
Trigger: GAGAGGGGTCCAAGTATGGCATTGATGAGTATCTGG...GGCTGCAGACTCCCAGAGAACCAGCACTGGGTTTACAGAATGAGGCCCTGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp TCTGCCGCAACACCTCCAGATGCACATTCGGTGTCTTCTGTGCTGAGCTGGCAGGTGTGCCCAGGGTCTTaGCAGACCTTTAGTTACTCA +
Preference number: 4 (lower is better)
Translates to: SAATPPDAHSVSSVLSWQVCPGS*QTFSYS
Trigger: TGAGTAACTAAAGGTCTGGCAAGACCCTGGGCACAC...CTGCCAGCTCAGCACAGAAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp AGGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGCACATTCGGTGTCTTCTTCACGCCATTCTCCTaGCTCAGCCTCCAGAGTAGC +
Preference number: 4 (lower is better)
Translates to: RVHSNLCRNTSRCTFGVFFTPFS*LSLQSS
Trigger: GCTACTCTGGAGGCTGAGGCAGGAGAATGGCGTGAA...GAAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp AAGTGGAGTCTACACAGACAGAGATGGGGAAAGGAAGGTGCTTCGTCTCCACCTGTGATCTCTGCTCACTaGAAGCTCCGCCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: KWSLHRQRWGKEGASSPPVISAH*KLRLLG
Trigger: ACCCAGGAGGCGGAGCTTGCAGTGAGCAGAGATCAC...AGGTGGAGACGAAGCACCTTCCTTTCCCCATCTCTGTCTGTGTAGACTCCACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp AGGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGCACATTCGGTGTCTTCTCATCCAGGCTGGAGTaGAGTGGCGTGATCTCTGCT +
Preference number: 4 (lower is better)
Translates to: RVHSNLCRNTSRCTFGVFSSRLE*SGVISA
Trigger: AGCAGAGATCACGCCACTGCACTCCAGCCTGGATGA...GAAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp GGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGCACATTCGGTGTCTTCTTCATCCAGGCTGGAGTaGAGTGGCGTGATCTCTGCT +
Preference number: 4 (lower is better)
Translates to: GFTQTSAATPPDAHSVSSSSRLE*SGVISA
Trigger: AGCAGAGATCACGCCACTGCACTCCAGCCTGGATGA...AGAAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp TCTGGGCCCATGTTCTGTAGCGACATGGGGGATGGTTGTGCCACTGCCCAGGCACCAACTATTCAACTCTaGCAAGAAAGCAGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: SGPMFCSDMGDGCATAQAPTIQL*QESSPR
Trigger: TCTGGGACTGCTTTCTTGGCAGAGTTGAATAGTTGG...TGCCTGGGCAGTGGCACAACCATCCCCCATGTCGCTACAGAACATGGGCCCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp AATTCAAGGGCTCATGCCTCTTCTACAAAGTGGGTTGGCAATTACAGAAATTCTCCAGAGCGGCGCCGCTaGCCGGGTCTTGCACGGGGA +
Preference number: 4 (lower is better)
Translates to: NSRAHASSTKWVGNYRNSPERRR*PGLARG
Trigger: TCCCCGTGCAAGACCCGGCCAGCGGCGCCGCTCTGG...AGAATTTCTGTAATTGCCAACCCACTTTGTAGAAGAGGCATGAGCCCTTGAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357578.8
ENST00000672652.1
CDS-3UTR CCA 90 bp GCTCTGGGCCCATGTTCTGTAGCGACATGGGGGATGGTTGTGCCACTGCCCAGGCTTTTACTTTCTCTCTaGCTCACAGTATCGCAAGGA +
Preference number: 4 (lower is better)
Translates to: ALGPCSVATWGMVVPLPRLLLSL*LTVSQG
Trigger: TCCTTGCGATACTGTGAGCCAGAGAGAAAGTAAAAG...CCTGGGCAGTGGCACAACCATCCCCCATGTCGCTACAGAACATGGGCCCAGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp TTGGCAAAGCCACTGACAGTAGGCAAGGAAGGGCTGGGCGGTGCTGCTCGTAACTCAATATCTCCCTCTTaGTCTAGATCAGGAGCTGGC +
Preference number: 4 (lower is better)
Translates to: LAKPLTVGKEGLGGAARNSISPS*SRSGAG
Trigger: GCCAGCTCCTGATCTAGACCAAGAGGGAGATATTGA...GTTACGAGCAGCACCGCCCAGCCCTTCCTTGCCTACTGTCAGTGGCTTTGCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp AGGTGCTCTGGGCCCATGTTCTGTAGCGACATGGGGGATGGTTGTGCCACTGCCGTACATTATCATCGCTaGGAAGTTCCTGCTGAGAAC +
Preference number: 4 (lower is better)
Translates to: RCSGPMFCSDMGDGCATAVHYHR*EVPAEN
Trigger: GTTCTCAGCAGGAACTTCCCAGCGATGATAATGTAC...GGCAGTGGCACAACCATCCCCCATGTCGCTACAGAACATGGGCCCAGAGCACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp GCTCTGGGCCCATGTTCTGTAGCGACATGGGGGATGGTTGTGCCACTGCCCAGGGAATCCCTGCATAGCTaGAGGAAGTTCAAGGATAAT +
Preference number: 4 (lower is better)
Translates to: ALGPCSVATWGMVVPLPRESLHS*RKFKDN
Trigger: ATTATCCTTGAACTTCCTCCAGCTATGCAGGGATTC...CCTGGGCAGTGGCACAACCATCCCCCATGTCGCTACAGAACATGGGCCCAGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp CCGGGTGATCATGGCACTGGGGAAATTCCACGGGGTGATGACTGCAGCCACGCCTCAGTGGCTTTCCCCTaGCACAATAATGATTTGGTA +
Preference number: 4 (lower is better)
Translates to: PGDHGTGEIPRGDDCSHASVAFP*HNNDLV
Trigger: TACCAAATCATTATTGTGCCAGGGGAAAGCCACTGA...GGCGTGGCTGCAGTCATCACCCCGTGGAATTTCCCCAGTGCCATGATCACCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000672557.1
CDS-3UTR TCA 90 bp AATTGCCTCCCCTACTTCCTTGGCATTCTTTCGAGAACAGGGAATAACATTGTACGCCTATGGGCTGCTTaGGGACCAGGGCCCGCCTGT +
Preference number: 4 (lower is better)
Translates to: NCLPYFLGILSRTGNNIVRLWAA*GPGPAC
Trigger: ACAGGCGGGCCCTGGTCCTCAAGCAGCCCATAGGCG...TACAATGTTATTCCCTGTTCTCGAAAGAATGCCAAGGAAGTAGGGGAGGCAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672557.1
ENST00000672652.1
CDS-3UTR TCA 90 bp GAGGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGCACATTCGGTGTCTTCCGAAAGTCTCTTCATaGGTGCACAGCATGTCCTGG +
Preference number: 4 (lower is better)
Translates to: EGSLKPLPQHLQMHIRCLPKVSS*VHSMSW
Trigger: CCAGGACATGCTGTGCACTCATGAAGAGACTTTCGG...AAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR TCA 90 bp GGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGCACATTCGGTGTCTTCTCCGAAAGTCTCTTCATaGGTGCACAGCATGTCCTGG +
Preference number: 4 (lower is better)
Translates to: GFTQTSAATPPDAHSVSSPKVSS*VHSMSW
Trigger: CCAGGACATGCTGTGCACTCATGAAGAGACTTTCGG...AGAAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR TCA 90 bp TGGCACATATTGGTCCCTAGTTACATTAAGGGCAGGGGTAGGATTTGCATCTGTGTGATCAAGCCTTTGTaGCGGCCCATGGGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: WHILVPSYIKGRGRICICVIKPL*RPMGLG
Trigger: GCCCAGCCCCATGGGCCGTCACAAAGGCTTGATCAC...ACAGATGCAAATCCTACCCCTGCCCTTAATGTAACTAGGGACCAATATGTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR TCA 90 bp TCTGCCAAGAAAGCAGTCCCAGACAATACCATAAATGAATGGGTGTGGCTATGCGTGATCAAGCCTTTGTaGCGGCCCATGGGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: SAKKAVPDNTINEWVWLCVIKPL*RPMGLG
Trigger: GCCCAGCCCCATGGGCCGTCACAAAGGCTTGATCAC...GCATAGCCACACCCATTCATTTATGGTATTGTCTGGGACTGCTTTCTTGGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR TCA 90 bp AGGATCAGTACAAATTGCCTCCCCTACTTCCTTGGCATTCTTTCGAGAACAGGGTGGGATGGGAGGTGCTaGACACACGCCCAAGGCAAC +
Preference number: 4 (lower is better)
Translates to: RISTNCLPYFLGILSRTGWDGRC*THAQGN
Trigger: GTTGCCTTGGGCGTGTGTTCAGCACCTCCCATCCCA...CCCTGTTCTCGAAAGAATGCCAAGGAAGTAGGGGAGGCAATTTGTACTGATCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672652.1
CDS-3UTR TCA 90 bp GGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGCACATTCGGTGTCTTCTAAGAACAGGCTCAGGTaGCAGCCACTTACTCAGGCT +
Preference number: 4 (lower is better)
Translates to: GFTQTSAATPPDAHSVSSKNRLR*QPLTQA
Trigger: AGCCTGAGTAAGTGGCTGTCACCTGAGCCTGTTCTT...AGAAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR TCA 90 bp GTGATTCTTGACAGGGCCGGGGCACTGTCACTAGGAGATGAATTTCAGCTCTTCTTGCTCTTTTGGAGGTaGGGGAGCAGCACCACACCA +
Preference number: 4 (lower is better)
Translates to: VILDRAGALSLGDEFQLFLLFWR*GSSTTP
Trigger: TGGTGTGGTGCTGCTCCCTCACCTCCAAAAGAGCAA...GAAGAGCTGAAATTCATCTCCTAGTGACAGTGCCCCGGCCCTGTCAAGAATCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR TCA 90 bp GGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGCACATTCGGTGTCTTCTCTGGGAAGTTCCTGCTaGGAACTCACGGTAGCTATG +
Preference number: 4 (lower is better)
Translates to: GFTQTSAATPPDAHSVSSLGSSC*ELTVAM
Trigger: CATAGCTACCGTGAGTTCTCAGCAGGAACTTCCCAG...AGAAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp TTTATTGTCTTTGAAAGAGGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATAGCTCCGCAGCCAAATaGAGGTCGCCATGGCCCGGG +
Preference number: 4 (lower is better)
Translates to: FIVFERGFTQTSAATPPDSSAAK*RSPWPG
Trigger: CCCGGGCCATGGCGACCTGCATTTGGCTGCGGAGCT...ATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCCTCTTTCAAAGACAATAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348925.2
ENST00000357578.8
CDS-3UTR GCA 90 bp TTTATTGTCTTTGAAAGAGGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATCCACGAAGCTGTCGGTaGGCAGCAGCGCCGCAGAGA +
Preference number: 4 (lower is better)
Translates to: FIVFERGFTQTSAATPPDPRSCR*AAAPQR
Trigger: TCTCTGCGGCGCTGCTGCGCACCGACAGCTTCGTGG...ATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCCTCTTTCAAAGACAATAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672652.1
CDS-3UTR GCA 90 bp TGGCACATATTGGTCCCTAGTTACATTAAGGGCAGGGGTAGGATTTGCATCTGTCCACGGGGTGATGACTaGAGCCACGCCTATGGGCTG +
Preference number: 4 (lower is better)
Translates to: WHILVPSYIKGRGRICICPRGDD*SHAYGL
Trigger: CAGCCCATAGGCGTGGCTGCAGTCATCACCCCGTGG...ACAGATGCAAATCCTACCCCTGCCCTTAATGTAACTAGGGACCAATATGTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp CGCAACACCTCCAGATGCACATTCGGTGTCTTCTGTGCTGAGCTGGCAGATGCCCCTTTTCACAGAGTTTaGTGCGTGGTGCAACAGGAT +
Preference number: 4 (lower is better)
Translates to: RNTSRCTFGVFCAELADAPFHRV*CVVQQD
Trigger: ATCCTGTTGCACCACGCAGCAAACTCTGTGAAAAGG...GGCATCTGCCAGCTCAGCACAGAAGACACCGAATGTGCATCTGGAGGTGTTGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp GAGCCAGGGCCTCATTCTGTAAACCCAGTGCTGGTTCTCTGGGAGTCTGCAGCCTCATGGATGCCCCTTTaGACCAAGAATTGGTTTGAG +
Preference number: 4 (lower is better)
Translates to: EPGPHSVNPVLVLWESAASWMPL*TKNWFE
Trigger: CTCAAACCAATTCTTGGTGCAAAGGGGCATCCATGA...GGCTGCAGACTCCCAGAGAACCAGCACTGGGTTTACAGAATGAGGCCCTGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp TCTGCCAAGAAAGCAGTCCCAGACAATACCATAAATGAATGGGTGTGGCTATGCGCCTTGTGCTGTGCCTaGTCTGAGGCAGCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: SAKKAVPDNTINEWVWLCALCCA*SEAAGA
Trigger: AGCCCCAGCTGCCTCAGAGCAGGCACAGCACAAGGC...GCATAGCCACACCCATTCATTTATGGTATTGTCTGGGACTGCTTTCTTGGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp CAGGCACGTGGCACATATTGGTCCCTAGTTACATTAAGGGCAGGGGTAGGATTTCATGGGGGATGGTTGTaGCACTGCCCAGGCAGTGAT +
Preference number: 4 (lower is better)
Translates to: QARGTYWSLVTLRAGVGFHGGWL*HCPGSD
Trigger: ATCACTGCCTGGGCAGTGGCACAACCATCCCCCATG...AAATCCTACCCCTGCCCTTAATGTAACTAGGGACCAATATGTGCCACGTGCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp ATGGCCCCTGCTACAGCCTGGTCCACGTTGGCACTGTCAAATACTATAAATGGACATGGGGGATGGTTGTaGCACTGCCCAGGCAGTGAT +
Preference number: 4 (lower is better)
Translates to: MAPATAWSTLALSNTINGHGGWL*HCPGSD
Trigger: ATCACTGCCTGGGCAGTGGCACAACCATCCCCCATG...TCCATTTATAGTATTTGACAGTGCCAACGTGGACCAGGCTGTAGCAGGGGCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672652.1
CDS-3UTR GCA 90 bp GGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGCACATTCGGTGTCTTCTGTTCACTCAAACCTCTaGCGCAACACCTCCAGATGC +
Preference number: 4 (lower is better)
Translates to: GFTQTSAATPPDAHSVSSVHSNL*RNTSRC
Trigger: GCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAAC...AGAAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp AGGTGCTCTGGGCCCATGTTCTGTAGCGACATGGGGGATGGTTGTGCCACTGCCTCCATCCTACCAAGCTaGTTCTGCTATTCTTTGCTT +
Preference number: 4 (lower is better)
Translates to: RCSGPMFCSDMGDGCATASILPS*FCYSLL
Trigger: AAGCAAAGAATAGCAGAAGCAGCTTGGTAGGATGGA...GGCAGTGGCACAACCATCCCCCATGTCGCTACAGAACATGGGCCCAGAGCACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp GCTCTGGGCCCATGTTCTGTAGCGACATGGGGGATGGTTGTGCCACTGCCCAGGTTTAATGAGAATCCCTaGATAGCTGGAGGAAGTTCA +
Preference number: 4 (lower is better)
Translates to: ALGPCSVATWGMVVPLPRFNENP*IAGGSS
Trigger: TGAACTTCCTCCAGCTATGCAGGGATTCTCATTAAA...CCTGGGCAGTGGCACAACCATCCCCCATGTCGCTACAGAACATGGGCCCAGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp CAAGGTGCTCTGGGCCCATGTTCTGTAGCGACATGGGGGATGGTTGTGCCACTGGCACGTGGCACATATTaGTCCCTAGTTACATTAAGG +
Preference number: 4 (lower is better)
Translates to: QGALGPCSVATWGMVVPLARGTY*SLVTLR
Trigger: CCTTAATGTAACTAGGGACCAATATGTGCCACGTGC...CAGTGGCACAACCATCCCCCATGTCGCTACAGAACATGGGCCCAGAGCACCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp GTGATTCTTGACAGGGCCGGGGCACTGTCACTAGGAGATGAATTTCAGCTCTTCGCAGCCACAGGCACGTaGCACATATTGGTCCCTAGT +
Preference number: 4 (lower is better)
Translates to: VILDRAGALSLGDEFQLFAATGT*HILVPS
Trigger: ACTAGGGACCAATATGTGCCACGTGCCTGTGGCTGC...GAAGAGCTGAAATTCATCTCCTAGTGACAGTGCCCCGGCCCTGTCAAGAATCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp GAGGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGCACATTCGGTGTCTTTGTTCTGTAGCGACATaGGGGATGGTTGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: EGSLKPLPQHLQMHIRCLCSVAT*GMVVPL
Trigger: CAGTGGCACAACCATCCCCCATGTCGCTACAGAACA...AAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp GGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGCACATTCGGTGTCTTCTTGTTCTGTAGCGACATaGGGGATGGTTGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: GFTQTSAATPPDAHSVSSCSVAT*GMVVPL
Trigger: CAGTGGCACAACCATCCCCCATGTCGCTACAGAACA...AGAAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp ATTGTCTTTGAAAGAGGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGCATCTTCTGTGCTGAGCTaGCAGATGCCGGGGAGGGGT +
Preference number: 4 (lower is better)
Translates to: IVFERGFTQTSAATPPDASSVLS*QMPGRG
Trigger: ACCCCTCCCCGGCATCTGCCAGCTCAGCACAGAAGA...TGCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCCTCTTTCAAAGACAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp TGGCACATATTGGTCCCTAGTTACATTAAGGGCAGGGGTAGGATTTGCATCTGTAGGTCGGTGGGCAAGTaGGCACTGGCCTCCTCCCAT +
Preference number: 4 (lower is better)
Translates to: WHILVPSYIKGRGRICICRSVGK*ALASSH
Trigger: ATGGGAGGAGGCCAGTGCCCACTTGCCCACCGACCT...ACAGATGCAAATCCTACCCCTGCCCTTAATGTAACTAGGGACCAATATGTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp TCTGGGCCCATGTTCTGTAGCGACATGGGGGATGGTTGTGCCACTGCCCAGGCAACCACAAGATGTAAGTaGAGTCTACACAGACAGAGA +
Preference number: 4 (lower is better)
Translates to: SGPMFCSDMGDGCATAQATTRCK*SLHRQR
Trigger: TCTCTGTCTGTGTAGACTCCACTTACATCTTGTGGT...TGCCTGGGCAGTGGCACAACCATCCCCCATGTCGCTACAGAACATGGGCCCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp CAGGCACGTGGCACATATTGGTCCCTAGTTACATTAAGGGCAGGGGTAGGATTTGGCCTCCCAAGGTGTTaGGATTACAGGCGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: QARGTYWSLVTLRAGVGFGLPRC*DYRREP
Trigger: TGGCTCACGCCTGTAATCCCAACACCTTGGGAGGCC...AAATCCTACCCCTGCCCTTAATGTAACTAGGGACCAATATGTGCCACGTGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp TCTGGGCCCATGTTCTGTAGCGACATGGGGGATGGTTGTGCCACTGCCCAGGCAGAATCCCTGCATAGCTaGAGGAAGTTCAAGGATAAT +
Preference number: 4 (lower is better)
Translates to: SGPMFCSDMGDGCATAQAESLHS*RKFKDN
Trigger: ATTATCCTTGAACTTCCTCCAGCTATGCAGGGATTC...TGCCTGGGCAGTGGCACAACCATCCCCCATGTCGCTACAGAACATGGGCCCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR CAA 72 bp TTAGATGCCATGGCCCCTGCTACAGCCTGGTCCACGTaGGCACTGTCAAATACTATAAATGGAGCAAGGCCG +
Preference number: 4 (lower is better)
Translates to: LDAMAPATAWST*ALSNTINGARP
Trigger: CGGCCTTGCTCCATTTATAGTATTTGACAGTGCCAACGTGGACCAGGCTGTAGCAGGGGCCATGGCATCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672652.1
CDS-3UTR TCA 90 bp CCACAACCCAGAATAACCACAAGATGTAAGTGGAGTCTACACAGACAGAGATGGCCCCCACCTTCCGGGTaGTCATGGCACTGGGGAAAT +
Preference number: 4 (lower is better)
Translates to: PQPRITTRCKWSLHRQRWPPPSG*SWHWGN
Trigger: ATTTCCCCAGTGCCATGATCACCCGGAAGGTGGGGG...CCATCTCTGTCTGTGTAGACTCCACTTACATCTTGTGGTTATTCTGGGTTGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR TCA 90 bp CGCAACACCTCCAGATGCACATTCGGTGTCTTCTGTGCTGAGCTGGCAGATGCCCACCAAGAATTGGTTTaGGCAAACACAAGTCTGTCC +
Preference number: 4 (lower is better)
Translates to: RNTSRCTFGVFCAELADAHQELV*ANTSLS
Trigger: GGACAGACTTGTGTTTGCTCAAACCAATTCTTGGTG...GGCATCTGCCAGCTCAGCACAGAAGACACCGAATGTGCATCTGGAGGTGTTGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR TCA 90 bp CCACAACCCAGAATAACCACAAGATGTAAGTGGAGTCTACACAGACAGAGATGGCCACTGCCCAGGCAGTaGTCAAGCCTTTGTGACGGC +
Preference number: 4 (lower is better)
Translates to: PQPRITTRCKWSLHRQRWPLPRQ*SSLCDG
Trigger: GCCGTCACAAAGGCTTGATCACTGCCTGGGCAGTGG...CCATCTCTGTCTGTGTAGACTCCACTTACATCTTGTGGTTATTCTGGGTTGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR TCA 90 bp AAGTGGAGTCTACACAGACAGAGATGGGGAAAGGAAGGTGCTTCGTCTCCACCTAAGAACAGGCTCAGGTaGCAGCCACTTACTCAGGCT +
Preference number: 4 (lower is better)
Translates to: KWSLHRQRWGKEGASSPPKNRLR*QPLTQA
Trigger: AGCCTGAGTAAGTGGCTGTCACCTGAGCCTGTTCTT...AGGTGGAGACGAAGCACCTTCCTTTCCCCATCTCTGTCTGTGTAGACTCCACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR TCA 90 bp TCAAACCTCTGCCGCAACACCTCCAGATGCACATTCGGTGTCTTCTGTGCTGAGAAAATGCTGAGTATGTaGTTCTTGACAGGGCCGGGG +
Preference number: 4 (lower is better)
Translates to: SNLCRNTSRCTFGVFCAEKMLSM*FLTGPG
Trigger: CCCCGGCCCTGTCAAGAATCACATACTCAGCATTTT...CTCAGCACAGAAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGAGGTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR TCA 90 bp TGGGGAGCCAGGGCCTCATTCTGTAAACCCAGTGCTGGTTCTCTGGGAGTCTGCTCTGGCCTCAATTTATaGACCCATGAGCCAAATATG +
Preference number: 4 (lower is better)
Translates to: WGARASFCKPSAGSLGVCSGLNL*THEPNM
Trigger: CATATTTGGCTCATGGGTTCATAAATTGAGGCCAGA...GCAGACTCCCAGAGAACCAGCACTGGGTTTACAGAATGAGGCCCTGGCTCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR TCA 90 bp GGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGCACATTCGGTGTCTTCTTCAAGAAGAAATCCCTaGTTTACCTCAGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: GFTQTSAATPPDAHSVSSSRRNP*FTSARA
Trigger: GGCCCTGGCTGAGGTAAATCAGGGATTTCTTCTTGA...AGAAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348925.2
CDS-3UTR GCA 90 bp CCACAACCCAGAATAACCACAAGATGTAAGTGGAGTCTACACAGACAGAGATGGGGCCCGCCTGTCCTTTaGCGGGGTGTGGATAATGTC +
Preference number: 4 (lower is better)
Translates to: PQPRITTRCKWSLHRQRWGPPVL*RGVDNV
Trigger: GACATTATCCACACCCCGGCAAAGGACAGGCGGGCC...CCATCTCTGTCTGTGTAGACTCCACTTACATCTTGTGGTTATTCTGGGTTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp GTGCTATTTATTGTCTTTGAAAGAGGGTTCACTCAAACCTCTGCCGCAACACCTCCACGGGGTGATGACTaGAGCCACGCCTATGGGCTG +
Preference number: 4 (lower is better)
Translates to: VLFIVFERGFTQTSAATPPRGDD*SHAYGL
Trigger: CAGCCCATAGGCGTGGCTGCAGTCATCACCCCGTGG...AGGTGTTGCGGCAGAGGTTTGAGTGAACCCTCTTTCAAAGACAATAAATAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp TGGCACATATTGGTCCCTAGTTACATTAAGGGCAGGGGTAGGATTTGCATCTGTAATCCCAGCCTGGCTTaGAAGCTCAGCCAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: WHILVPSYIKGRGRICICNPSLA*KLSQGQ
Trigger: CTGGCCCTGGCTGAGCTTGCAAGCCAGGCTGGGATT...ACAGATGCAAATCCTACCCCTGCCCTTAATGTAACTAGGGACCAATATGTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357578.8
CDS-3UTR GCA 90 bp CGCAACACCTCCAGATGCACATTCGGTGTCTTCTGTGCTGAGCTGGCAGATGCCTCATGGATGCCCCTTTaGACCAAGAATTGGTTTGAG +
Preference number: 4 (lower is better)
Translates to: RNTSRCTFGVFCAELADASWMPL*TKNWFE
Trigger: CTCAAACCAATTCTTGGTGCAAAGGGGCATCCATGA...GGCATCTGCCAGCTCAGCACAGAAGACACCGAATGTGCATCTGGAGGTGTTGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp CGCAACACCTCCAGATGCACATTCGGTGTCTTCTGTGCTGAGCTGGCAGATGCCCAAAGGCATCATGGATaGCCCTTTGCACCAAGAATT +
Preference number: 4 (lower is better)
Translates to: RNTSRCTFGVFCAELADAQRHHG*PFAPRI
Trigger: AATTCTTGGTGCAAAGGGGCATCCATGATGCCTTTG...GGCATCTGCCAGCTCAGCACAGAAGACACCGAATGTGCATCTGGAGGTGTTGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp CAGGCACGTGGCACATATTGGTCCCTAGTTACATTAAGGGCAGGGGTAGGATTTATGCCCACTTCCAGCTaGTCTGCCACTCTCCAGATC +
Preference number: 4 (lower is better)
Translates to: QARGTYWSLVTLRAGVGFMPTSS*SATLQI
Trigger: GATCTGGAGAGTGGCAGAGCAGCTGGAAGTGGGCAT...AAATCCTACCCCTGCCCTTAATGTAACTAGGGACCAATATGTGCCACGTGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp TTATTGTCTTTGAAAGAGGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGGGTTCTCTGGGAGTCTaGAGCCACAGGCACGTGGCA +
Preference number: 4 (lower is better)
Translates to: LLSLKEGSLKPLPQHLQMGSLGV*SHRHVA
Trigger: TGCCACGTGCCTGTGGCTGCAGACTCCCAGAGAACC...CATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCCTCTTTCAAAGACAATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp GTGCTATTTATTGTCTTTGAAAGAGGGTTCACTCAAACCTCTGCCGCAACACCTGCCTTGTGCTGTGCCTaGTCTGAGGCAGCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: VLFIVFERGFTQTSAATPALCCA*SEAAGA
Trigger: AGCCCCAGCTGCCTCAGAGCAGGCACAGCACAAGGC...AGGTGTTGCGGCAGAGGTTTGAGTGAACCCTCTTTCAAAGACAATAAATAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp GTGCTATTTATTGTCTTTGAAAGAGGGTTCACTCAAACCTCTGCCGCAACACCTGCTGGGCCTGCCTTGTaGTGTGCCTGCTCTGAGGCA +
Preference number: 4 (lower is better)
Translates to: VLFIVFERGFTQTSAATPAGPAL*CACSEA
Trigger: TGCCTCAGAGCAGGCACAGCACAAGGCAGGCCCAGC...AGGTGTTGCGGCAGAGGTTTGAGTGAACCCTCTTTCAAAGACAATAAATAGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp TTATTGTCTTTGAAAGAGGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGGCCAGGCCATGCCACTaGGTGCCTTCCATCCTACCA +
Preference number: 4 (lower is better)
Translates to: LLSLKEGSLKPLPQHLQMARPCH*VPSILP
Trigger: TGGTAGGATGGAAGGCACGCAGTGGCATGGCCTGGC...CATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCCTCTTTCAAAGACAATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp TCTGCCAAGAAAGCAGTCCCAGACAATACCATAAATGAATGGGTGTGGCTATGCGAAGGAGCCAGGCCATaGCACTGCGTGCCTTCCATC +
Preference number: 4 (lower is better)
Translates to: SAKKAVPDNTINEWVWLCEGARP*HCVPSI
Trigger: GATGGAAGGCACGCAGTGGCATGGCCTGGCTCCTTC...GCATAGCCACACCCATTCATTTATGGTATTGTCTGGGACTGCTTTCTTGGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp TCTGCCGCAACACCTCCAGATGCACATTCGGTGTCTTCTGTGCTGAGCTGGCAGCCAACTATTCAACTCTaGCAAGAAAGCAGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: SAATPPDAHSVSSVLSWQPTIQL*QESSPR
Trigger: TCTGGGACTGCTTTCTTGGCAGAGTTGAATAGTTGG...CTGCCAGCTCAGCACAGAAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp GGATGGTTGTGCCACTGCCCAGGCAGTGATCAAGCCTTTGTGACGGCCCATGGGAAATCTTTTAGGCTTTaGAGGCTATACTGTCCCTGT +
Preference number: 4 (lower is better)
Translates to: GWLCHCPGSDQAFVTAHGKSFRL*RLYCPC
Trigger: ACAGGGACAGTATAGCCTGCAAAGCCTAAAAGATTT...CCCATGGGCCGTCACAAAGGCTTGATCACTGCCTGGGCAGTGGCACAACCATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp AGGATCAGTACAAATTGCCTCCCCTACTTCCTTGGCATTCTTTCGAGAACAGGGATGAACTCCTCTCCTTaGCGGAGACCTCCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: RISTNCLPYFLGILSRTGMNSSP*RRPPSS
Trigger: GCTGGAGGGAGGTCTCCGCCAAGGAGAGGAGTTCAT...CCCTGTTCTCGAAAGAATGCCAAGGAAGTAGGGGAGGCAATTTGTACTGATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672557.1
ENST00000672652.1
CDS-3UTR CCA 90 bp AGGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGCACATTCGGTGTCTTCCCTCCCCTACTTCCTTaGCATTCTTTCGAGAACAGG +
Preference number: 4 (lower is better)
Translates to: RVHSNLCRNTSRCTFGVFPPLLP*HSFENR
Trigger: CCTGTTCTCGAAAGAATGCCAAGGAAGTAGGGGAGG...GAAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672652.1
CDS-3UTR CCA 90 bp GAGCCAGGGCCTCATTCTGTAAACCCAGTGCTGGTTCTCTGGGAGTCTGCAGCCTCTCCAGATCTGGGCTaGGTCTTGAGAGTAAAAATA +
Preference number: 4 (lower is better)
Translates to: EPGPHSVNPVLVLWESAASPDLG*VLRVKI
Trigger: TATTTTTACTCTCAAGACCCAGCCCAGATCTGGAGA...GGCTGCAGACTCCCAGAGAACCAGCACTGGGTTTACAGAATGAGGCCCTGGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp AGGATCAGTACAAATTGCCTCCCCTACTTCCTTGGCATTCTTTCGAGAACAGGGGTGATCTGCCTGCCTTaGCCTCCCAAGGTGTTGGGA +
Preference number: 4 (lower is better)
Translates to: RISTNCLPYFLGILSRTGVICLP*PPKVLG
Trigger: TCCCAACACCTTGGGAGGCCAAGGCAGGCAGATCAC...CCCTGTTCTCGAAAGAATGCCAAGGAAGTAGGGGAGGCAATTTGTACTGATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672652.1
CDS-3UTR TCA 90 bp GAGCCAGGGCCTCATTCTGTAAACCCAGTGCTGGTTCTCTGGGAGTCTGCAGCCCGTAACACACATACTTaGGTTCCAGATACTCATCAA +
Preference number: 4 (lower is better)
Translates to: EPGPHSVNPVLVLWESAARNTHT*VPDTHQ
Trigger: TTGATGAGTATCTGGAACTCAAGTATGTGTGTTACG...GGCTGCAGACTCCCAGAGAACCAGCACTGGGTTTACAGAATGAGGCCCTGGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR TCA 90 bp AGGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGCACATTCGGTGTCTTCGTCTTTCTTTCAAAGTaGGAGGCAACGCCGGTCATA +
Preference number: 4 (lower is better)
Translates to: RVHSNLCRNTSRCTFGVFVFLSK*EATPVI
Trigger: TATGACCGGCGTTGCCTCTCACTTTGAAAGAAAGAC...GAAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR TCA 90 bp AGGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGCACATTCGGTGTCTTCTTCCCAGTGGCTCAATaGGGGATGTTAAATCCTAGG +
Preference number: 4 (lower is better)
Translates to: RVHSNLCRNTSRCTFGVFFPVAQ*GMLNPR
Trigger: CCTAGGATTTAACATCCCTCATTGAGCCACTGGGAA...GAAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR TCA 90 bp GGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGCACATTCGGTGTCTTCTTTCCCAGTGGCTCAATaGGGGATGTTAAATCCTAGG +
Preference number: 4 (lower is better)
Translates to: GFTQTSAATPPDAHSVSSFPVAQ*GMLNPR
Trigger: CCTAGGATTTAACATCCCTCATTGAGCCACTGGGAA...AGAAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR TCA 90 bp GTGATTCTTGACAGGGCCGGGGCACTGTCACTAGGAGATGAATTTCAGCTCTTCAAAATGCTGAGTATGTaGTTCTTGACAGGGCCGGGG +
Preference number: 4 (lower is better)
Translates to: VILDRAGALSLGDEFQLFKMLSM*FLTGPG
Trigger: CCCCGGCCCTGTCAAGAATCACATACTCAGCATTTT...GAAGAGCTGAAATTCATCTCCTAGTGACAGTGCCCCGGCCCTGTCAAGAATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR TCA 90 bp AGGTGCTCTGGGCCCATGTTCTGTAGCGACATGGGGGATGGTTGTGCCACTGCCCAATTTATGAACCCATaGGCCAAATATGCAAGAAGA +
Preference number: 4 (lower is better)
Translates to: RCSGPMFCSDMGDGCATAQFMNP*AKYARR
Trigger: TCTTCTTGCATATTTGGCTCATGGGTTCATAAATTG...GGCAGTGGCACAACCATCCCCCATGTCGCTACAGAACATGGGCCCAGAGCACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR TCA 90 bp TCTGGGCCCATGTTCTGTAGCGACATGGGGGATGGTTGTGCCACTGCCCAGGCAATCAAGGATATACAATaGGTCTCTGGCCTCAATTTA +
Preference number: 4 (lower is better)
Translates to: SGPMFCSDMGDGCATAQAIKDIQ*VSGLNL
Trigger: TAAATTGAGGCCAGAGACTCATTGTATATCCTTGAT...TGCCTGGGCAGTGGCACAACCATCCCCCATGTCGCTACAGAACATGGGCCCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR TCA 90 bp CGCAACACCTCCAGATGCACATTCGGTGTCTTCTGTGCTGAGCTGGCAGATGCCAGACAATACCATAAATaGATGGGTGTGGCTATGCTC +
Preference number: 4 (lower is better)
Translates to: RNTSRCTFGVFCAELADARQYHK*MGVAML
Trigger: GAGCATAGCCACACCCATTCATTTATGGTATTGTCT...GGCATCTGCCAGCTCAGCACAGAAGACACCGAATGTGCATCTGGAGGTGTTGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR TCA 90 bp CAGGCACGTGGCACATATTGGTCCCTAGTTACATTAAGGGCAGGGGTAGGATTTCTGGGAAGTTCCTGCTaGGAACTCACGGTAGCTATG +
Preference number: 4 (lower is better)
Translates to: QARGTYWSLVTLRAGVGFLGSSC*ELTVAM
Trigger: CATAGCTACCGTGAGTTCTCAGCAGGAACTTCCCAG...AAATCCTACCCCTGCCCTTAATGTAACTAGGGACCAATATGTGCCACGTGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp CTATGCCAGAAAAGTACTTTCTTCACAGGAGGTGTTGAAATAATGCCGGATAAAGACAGTACAGCCGGCTaGCAGGGCGGCCCCCACCTT +
Preference number: 4 (lower is better)
Translates to: LCQKSTFFTGGVEIMPDKDSTAG*QGGPHL
Trigger: AAGGTGGGGGCCGCCCTGGCAGCCGGCTGTACTGTC...TTTATCCGGCATTATTTCAACACCTCCTGTGAAGAAAGTACTTTTCTGGCATAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp GGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGCACATTCGGTGTCTTCTGAGTTTGCTGCGTGGTaGAACAGGATCTTTCCTGTA +
Preference number: 4 (lower is better)
Translates to: GFTQTSAATPPDAHSVSSEFAAW*NRIFPV
Trigger: TACAGGAAAGATCCTGTTGCACCACGCAGCAAACTC...AGAAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672652.1
CDS-3UTR GCA 90 bp AGGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGCACATTCGGTGTCTTCGTTCCTAAATTTAGATaGCATGGCCCCTGCTACAGC +
Preference number: 4 (lower is better)
Translates to: RVHSNLCRNTSRCTFGVFVPKFR*HGPCYS
Trigger: GCTGTAGCAGGGGCCATGGCATCTAAATTTAGGAAC...GAAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp TTATTGTCTTTGAAAGAGGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGCACTTCCAGCTGCTCTaGCACTCTCCAGATCTGGGC +
Preference number: 4 (lower is better)
Translates to: LLSLKEGSLKPLPQHLQMHFQLL*HSPDLG
Trigger: GCCCAGATCTGGAGAGTGGCAGAGCAGCTGGAAGTG...CATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCCTCTTTCAAAGACAATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp ATTGTCTTTGAAAGAGGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGCAATGCCCACTTCCAGCTaGTCTGCCACTCTCCAGATC +
Preference number: 4 (lower is better)
Translates to: IVFERGFTQTSAATPPDAMPTSS*SATLQI
Trigger: GATCTGGAGAGTGGCAGAGCAGCTGGAAGTGGGCAT...TGCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCCTCTTTCAAAGACAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp TTATTGTCTTTGAAAGAGGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGCATGGGGGATGGTTGTaGCACTGCCCAGGCAGTGAT +
Preference number: 4 (lower is better)
Translates to: LLSLKEGSLKPLPQHLQMHGGWL*HCPGSD
Trigger: ATCACTGCCTGGGCAGTGGCACAACCATCCCCCATG...CATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCCTCTTTCAAAGACAATAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp CCACAACCCAGAATAACCACAAGATGTAAGTGGAGTCTACACAGACAGAGATGGGGCCATGCCACTGCGTaGCTTCCATCCTACCAAGCT +
Preference number: 4 (lower is better)
Translates to: PQPRITTRCKWSLHRQRWGHATA*LPSYQA
Trigger: AGCTTGGTAGGATGGAAGGCACGCAGTGGCATGGCC...CCATCTCTGTCTGTGTAGACTCCACTTACATCTTGTGGTTATTCTGGGTTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp TTGGCAAAGCCACTGACAGTAGGCAAGGAAGGGCTGGGCGGTGCTGCTCGTAACAGAAGACTCAAAATTTaGCACCCAGCCAAAGAATCT +
Preference number: 4 (lower is better)
Translates to: LAKPLTVGKEGLGGAARNRRLKI*HPAKES
Trigger: AGATTCTTTGGCTGGGTGGCAAATTTTGAGTCTTCT...GTTACGAGCAGCACCGCCCAGCCCTTCCTTGCCTACTGTCAGTGGCTTTGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp ATTGTCTTTGAAAGAGGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGCAGAGTTTGCTGCGTGGTaGAACAGGATCTCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: IVFERGFTQTSAATPPDAEFAAW*NRISAR
Trigger: CCTGGCTGAGATCCTGTTGCACCACGCAGCAAACTC...TGCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCCTCTTTCAAAGACAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672352.1
CDS-3UTR CCA 90 bp TGGGGAGCCAGGGCCTCATTCTGTAAACCCAGTGCTGGTTCTCTGGGAGTCTGCCTTTGCACCAAGAATTaGTTTGAGCAAACACAAGTC +
Preference number: 4 (lower is better)
Translates to: WGARASFCKPSAGSLGVCLCTKN*FEQTQV
Trigger: GACTTGTGTTTGCTCAAACCAATTCTTGGTGCAAAG...GCAGACTCCCAGAGAACCAGCACTGGGTTTACAGAATGAGGCCCTGGCTCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp TTGGCAAAGCCACTGACAGTAGGCAAGGAAGGGCTGGGCGGTGCTGCTCGTAACGCCTCTTCTACAAAGTaGGTTGGCAATTACAGAAAT +
Preference number: 4 (lower is better)
Translates to: LAKPLTVGKEGLGGAARNASSTK*VGNYRN
Trigger: ATTTCTGTAATTGCCAACCCACTTTGTAGAAGAGGC...GTTACGAGCAGCACCGCCCAGCCCTTCCTTGCCTACTGTCAGTGGCTTTGCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp TTCACTCAAACCTCTGCCGCAACACCTCCAGATGCACATTCGGTGTCTTCTGTGTCGTCTCCACCTACTTaGCCGCCTAATTGGATTTGC +
Preference number: 4 (lower is better)
Translates to: FTQTSAATPPDAHSVSSVSSPPT*PPNWIC
Trigger: GCAAATCCAATTAGGCGGCCAAGTAGGTGGAGACGA...CACAGAAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR CAA 72 bp GGAGATGAATTTCAGCTCTTCCTTCTCCTTGGGACCTaGGGAATGTGGCTAGTACACTCCAGGCCAGATGCT +
Preference number: 4 (lower is better)
Translates to: GDEFQLFLLLGT*GMWLVHSRPDA
Trigger: AGCATCTGGCCTGGAGTGTACTAGCCACATTCCCAAGGTCCCAAGGAGAAGGAAGAGCTGAAATTCATCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR TCA 90 bp ATCGCTGGGAAGTTCCTGCTGAGAACTCACGGTAGCTATGCCAGAAAAGTACTTCCGAAAGTCTCTTCATaGGTGCACAGCATGTCCTGG +
Preference number: 4 (lower is better)
Translates to: IAGKFLLRTHGSYARKVLPKVSS*VHSMSW
Trigger: CCAGGACATGCTGTGCACTCATGAAGAGACTTTCGG...AAGTACTTTTCTGGCATAGCTACCGTGAGTTCTCAGCAGGAACTTCCCAGCGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR TCA 90 bp GAGGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGCACATTCGGTGTCTTAAATTAATCCTTCGTTaGCGCCAACCATGCCCACTT +
Preference number: 4 (lower is better)
Translates to: EGSLKPLPQHLQMHIRCLKLILR*RQPCPL
Trigger: AAGTGGGCATGGTTGGCGTCAACGAAGGATTAATTT...AAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR TCA 90 bp TGCCTCTTCTACAAAGTGGGTTGGCAATTACAGAAATTCTTTCCCTTTTGGGTTGTGATCAAGCCTTTGTaGCGGCCCATGGGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: CLFYKVGWQLQKFFPFWVVIKPL*RPMGLG
Trigger: GCCCAGCCCCATGGGCCGTCACAAAGGCTTGATCAC...AACCCAAAAGGGAAAGAATTTCTGTAATTGCCAACCCACTTTGTAGAAGAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR TCA 90 bp AAGTTCCTGCTGAGAACTCACGGTAGCTATGCCAGAAAAGTACTTTCTTCACAGGATCTCCTGATGTCGTaGTCTGCCTGCCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: KFLLRTHGSYARKVLSSQDLLMS*SACLGL
Trigger: GAGGCCAAGGCAGGCAGATCACGACATCAGGAGATC...CTGTGAAGAAAGTACTTTTCTGGCATAGCTACCGTGAGTTCTCAGCAGGAACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp TCCCCTACTTCCTTGGCATTCTTTCGAGAACAGGGAATAACATTGTATACACCTAATCCCAGCCTGGCTTaGAAGCTCAGCCAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: SPTSLAFFREQGITLYTPNPSLA*KLSQGQ
Trigger: CTGGCCCTGGCTGAGCTTGCAAGCCAGGCTGGGATT...AGGTGTATACAATGTTATTCCCTGTTCTCGAAAGAATGCCAAGGAAGTAGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672557.1
CDS-3UTR GCA 90 bp TTCACTCAAACCTCTGCCGCAACACCTCCAGATGCACATTCGGTGTCTTCTGTGCATGGCCTCGGCGAATaGTTTTACAAAGGCATCATG +
Preference number: 4 (lower is better)
Translates to: FTQTSAATPPDAHSVSSVHGLGE*FYKGIM
Trigger: CATGATGCCTTTGTAAAAGCATTCGCCGAGGCCATG...CACAGAAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp CAGGCACGTGGCACATATTGGTCCCTAGTTACATTAAGGGCAGGGGTAGGATTTAGCTGCGTTAGCGATTaGTATAGCCTCCTCCTCTGT +
Preference number: 4 (lower is better)
Translates to: QARGTYWSLVTLRAGVGFSCVSD*YSLLLC
Trigger: ACAGAGGAGGAGGCTATAGCAATCGCTAACGCAGCT...AAATCCTACCCCTGCCCTTAATGTAACTAGGGACCAATATGTGCCACGTGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp CATTACCTACGCGCAGGTTCTTCTTCATGGCCTCGGCGAATGCTTTTACAAAGGAGCTGCGTTAGCGATTaGTATAGCCTCCTCCTCTGT +
Preference number: 4 (lower is better)
Translates to: HYLRAGSSSWPRRMLLQRSCVSD*YSLLLC
Trigger: ACAGAGGAGGAGGCTATAGCAATCGCTAACGCAGCT...CCTTTGTAAAAGCATTCGCCGAGGCCATGAAGAAGAACCTGCGCGTAGGTAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672652.1
CDS-3UTR GCA 90 bp CCACAACCCAGAATAACCACAAGATGTAAGTGGAGTCTACACAGACAGAGATGGATGCCCACTTCCAGCTaGTCTGCCACTCTCCAGATC +
Preference number: 4 (lower is better)
Translates to: PQPRITTRCKWSLHRQRWMPTSS*SATLQI
Trigger: GATCTGGAGAGTGGCAGAGCAGCTGGAAGTGGGCAT...CCATCTCTGTCTGTGTAGACTCCACTTACATCTTGTGGTTATTCTGGGTTGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp TTTATTGTCTTTGAAAGAGGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGGATGGTTGTGCCACTaGCCAGGCAGTGATCAAGCC +
Preference number: 4 (lower is better)
Translates to: FIVFERGFTQTSAATPPDGWLCH*PGSDQA
Trigger: GGCTTGATCACTGCCTGGGCAGTGGCACAACCATCC...ATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCCTCTTTCAAAGACAATAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp AAGTTCCTGCTGAGAACTCACGGTAGCTATGCCAGAAAAGTACTTTCTTCACAGGGATGGTTGTGCCACTaGCCAGGCAGTGATCAAGCC +
Preference number: 4 (lower is better)
Translates to: KFLLRTHGSYARKVLSSQGWLCH*PGSDQA
Trigger: GGCTTGATCACTGCCTGGGCAGTGGCACAACCATCC...CTGTGAAGAAAGTACTTTTCTGGCATAGCTACCGTGAGTTCTCAGCAGGAACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp TTTATTGTCTTTGAAAGAGGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATCCTGATGTCGTGATCTaGCTGCCTTGGCCTCCCAAG +
Preference number: 4 (lower is better)
Translates to: FIVFERGFTQTSAATPPDPDVVI*LPWPPK
Trigger: CTTGGGAGGCCAAGGCAGGCAGATCACGACATCAGG...ATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCCTCTTTCAAAGACAATAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp TTCCTTCCACAACCCAGAATAACCACAAGATGTAAGTGGAGTCTACACAGACAGCCTGATGTCGTGATCTaGCTGCCTTGGCCTCCCAAG +
Preference number: 4 (lower is better)
Translates to: FLPQPRITTRCKWSLHRQPDVVI*LPWPPK
Trigger: CTTGGGAGGCCAAGGCAGGCAGATCACGACATCAGG...CTGTCTGTGTAGACTCCACTTACATCTTGTGGTTATTCTGGGTTGTGGAAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp TCAGTACAAATTGCCTCCCCTACTTCCTTGGCATTCTTTCGAGAACAGGGAATACCTGATGTCGTGATCTaGCTGCCTTGGCCTCCCAAG +
Preference number: 4 (lower is better)
Translates to: SVQIASPTSLAFFREQGIPDVVI*LPWPPK
Trigger: CTTGGGAGGCCAAGGCAGGCAGATCACGACATCAGG...TATTCCCTGTTCTCGAAAGAATGCCAAGGAAGTAGGGGAGGCAATTTGTACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672652.1
CDS-3UTR GCA 90 bp TTATTGTCTTTGAAAGAGGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGTCATCCAGGCTGGAGTaGAGTGGCGTGATCTCTGCT +
Preference number: 4 (lower is better)
Translates to: LLSLKEGSLKPLPQHLQMSSRLE*SGVISA
Trigger: AGCAGAGATCACGCCACTGCACTCCAGCCTGGATGA...CATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCCTCTTTCAAAGACAATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp TGGCACATATTGGTCCCTAGTTACATTAAGGGCAGGGGTAGGATTTGCATCTGTCATCAATGCCATACTTaGACCCCTCTCGCCCAAGGC +
Preference number: 4 (lower is better)
Translates to: WHILVPSYIKGRGRICICHQCHT*TPLAQG
Trigger: GCCTTGGGCGAGAGGGGTCCAAGTATGGCATTGATG...ACAGATGCAAATCCTACCCCTGCCCTTAATGTAACTAGGGACCAATATGTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp CCACAACCCAGAATAACCACAAGATGTAAGTGGAGTCTACACAGACAGAGATGGCATCAATGCCATACTTaGACCCCTCTCGCCCAAGGC +
Preference number: 4 (lower is better)
Translates to: PQPRITTRCKWSLHRQRWHQCHT*TPLAQG
Trigger: GCCTTGGGCGAGAGGGGTCCAAGTATGGCATTGATG...CCATCTCTGTCTGTGTAGACTCCACTTACATCTTGTGGTTATTCTGGGTTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp CATCCTACCAAGCTGCTTCTGCTATTCTTTGCTTTACACTTCAGCTCATTTACTCTTTGTGACGGCCCATaGGGCTGGGCCTGCCTTGTG +
Preference number: 4 (lower is better)
Translates to: HPTKLLLLFFALHFSSFTLCDGP*GWACLV
Trigger: CACAAGGCAGGCCCAGCCCCATGGGCCGTCACAAAG...AGTAAATGAGCTGAAGTGTAAAGCAAAGAATAGCAGAAGCAGCTTGGTAGGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp ATTGTCTTTGAAAGAGGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGCATGTTCTGTAGCGACATaGGGGATGGTTGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: IVFERGFTQTSAATPPDACSVAT*GMVVPL
Trigger: CAGTGGCACAACCATCCCCCATGTCGCTACAGAACA...TGCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCCTCTTTCAAAGACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp ATTGTCTTTGAAAGAGGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGCAACTGTATCCATGGGATaGGAGGTGCTGAACACACGC +
Preference number: 4 (lower is better)
Translates to: IVFERGFTQTSAATPPDATVSMG*EVLNTR
Trigger: GCGTGTGTTCAGCACCTCCCATCCCATGGATACAGT...TGCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCCTCTTTCAAAGACAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp TCTGCCGCAACACCTCCAGATGCACATTCGGTGTCTTCTGTGCTGAGCTGGCAGACTTGGCCGCCTAATTaGATTTGCATCTGTTTAAGA +
Preference number: 4 (lower is better)
Translates to: SAATPPDAHSVSSVLSWQTWPPN*ICICLR
Trigger: TCTTAAACAGATGCAAATCCAATTAGGCGGCCAAGT...CTGCCAGCTCAGCACAGAAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp TCTGCCGCAACACCTCCAGATGCACATTCGGTGTCTTCTGTGCTGAGCTGGCAGATGTTAAATCCTAGGTaGGGTTCAGGAGTAATTGCA +
Preference number: 4 (lower is better)
Translates to: SAATPPDAHSVSSVLSWQMLNPR*GSGVIA
Trigger: TGCAATTACTCCTGAACCCCACCTAGGATTTAACAT...CTGCCAGCTCAGCACAGAAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp TTCCTTCCACAACCCAGAATAACCACAAGATGTAAGTGGAGTCTACACAGACAGGTGATCTGCCTGCCTTaGCCTCCCAAGGTGTTGGGA +
Preference number: 4 (lower is better)
Translates to: FLPQPRITTRCKWSLHRQVICLP*PPKVLG
Trigger: TCCCAACACCTTGGGAGGCCAAGGCAGGCAGATCAC...CTGTCTGTGTAGACTCCACTTACATCTTGTGGTTATTCTGGGTTGTGGAAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp GGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGCACATTCGGTGTCTTCTGTACATTATCATCGCTaGGAAGTTCCTGCTGAGAAC +
Preference number: 4 (lower is better)
Translates to: GFTQTSAATPPDAHSVSSVHYHR*EVPAEN
Trigger: GTTCTCAGCAGGAACTTCCCAGCGATGATAATGTAC...AGAAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR TCA 90 bp AATTCAAGGGCTCATGCCTCTTCTACAAAGTGGGTTGGCAATTACAGAAATTCTCCCCCACCTTCCGGGTaGTCATGGCACTGGGGAAAT +
Preference number: 4 (lower is better)
Translates to: NSRAHASSTKWVGNYRNSPPPSG*SWHWGN
Trigger: ATTTCCCCAGTGCCATGATCACCCGGAAGGTGGGGG...AGAATTTCTGTAATTGCCAACCCACTTTGTAGAAGAGGCATGAGCCCTTGAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR TCA 90 bp TTCACTCAAACCTCTGCCGCAACACCTCCAGATGCACATTCGGTGTCTTCTGTGAAATTAATCCTTCGTTaGCGCCAACCATGCCCACTT +
Preference number: 4 (lower is better)
Translates to: FTQTSAATPPDAHSVSSVKLILR*RQPCPL
Trigger: AAGTGGGCATGGTTGGCGTCAACGAAGGATTAATTT...CACAGAAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR TCA 90 bp TTATTGTCTTTGAAAGAGGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGAAGAACAGGCTCAGGTaGCAGCCACTTACTCAGGCT +
Preference number: 4 (lower is better)
Translates to: LLSLKEGSLKPLPQHLQMKNRLR*QPLTQA
Trigger: AGCCTGAGTAAGTGGCTGTCACCTGAGCCTGTTCTT...CATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCCTCTTTCAAAGACAATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR TCA 90 bp CGGAATAGAGAATTTCTCCATGTGCCTCCTTCAGTGGCTTTCCCCTGGCACAATACCAAGCCAGAACCCTaGACTTACACTTTCAGCTGT +
Preference number: 4 (lower is better)
Translates to: RNREFLHVPPSVAFPWHNTKPEP*TYTFSC
Trigger: ACAGCTGAAAGTGTAAGTTCAGGGTTCTGGCTTGGT...ATTGTGCCAGGGGAAAGCCACTGAAGGAGGCACATGGAGAAATTCTCTATTCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672557.1
CDS-3UTR GCA 90 bp ATTGTCTTTGAAAGAGGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGCAGAACTTGATAACTGGTaGCAGAGGCCCGAAAGTCTC +
Preference number: 4 (lower is better)
Translates to: IVFERGFTQTSAATPPDAELDNW*QRPESL
Trigger: GAGACTTTCGGGCCTCTGGCACCAGTTATCAAGTTC...TGCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCCTCTTTCAAAGACAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp CATCCTACCAAGCTGCTTCTGCTATTCTTTGCTTTACACTTCAGCTCATTTACTGGTTCTCTGGGAGTCTaGAGCCACAGGCACGTGGCA +
Preference number: 4 (lower is better)
Translates to: HPTKLLLLFFALHFSSFTGSLGV*SHRHVA
Trigger: TGCCACGTGCCTGTGGCTGCAGACTCCCAGAGAACC...AGTAAATGAGCTGAAGTGTAAAGCAAAGAATAGCAGAAGCAGCTTGGTAGGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp ATTGTCTTTGAAAGAGGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGCACGCAACACCTCCAGATaGACATTCGGTGTCTTCTGT +
Preference number: 4 (lower is better)
Translates to: IVFERGFTQTSAATPPDARNTSR*TFGVFC
Trigger: ACAGAAGACACCGAATGTGCATCTGGAGGTGTTGCG...TGCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCCTCTTTCAAAGACAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp CATCCTACCAAGCTGCTTCTGCTATTCTTTGCTTTACACTTCAGCTCATTTACTGCCAGGCCATGCCACTaGGTGCCTTCCATCCTACCA +
Preference number: 4 (lower is better)
Translates to: HPTKLLLLFFALHFSSFTARPCH*VPSILP
Trigger: TGGTAGGATGGAAGGCACGCAGTGGCATGGCCTGGC...AGTAAATGAGCTGAAGTGTAAAGCAAAGAATAGCAGAAGCAGCTTGGTAGGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp CCATCCTACCAAGCTGCTTCTGCTATTCTTTGCTTTACACTTCAGCTCATTTACATGAACTCCTCTCCTTaGCGGAGACCTCCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: PSYQAASAILCFTLQLIYMNSSP*RRPPSS
Trigger: GCTGGAGGGAGGTCTCCGCCAAGGAGAGGAGTTCAT...GTAAATGAGCTGAAGTGTAAAGCAAAGAATAGCAGAAGCAGCTTGGTAGGATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp ATGGCCCCTGCTACAGCCTGGTCCACGTTGGCACTGTCAAATACTATAAATGGAACAGAGTTTGCTGCGTaGTGCAACAGGATCTTTCCT +
Preference number: 4 (lower is better)
Translates to: MAPATAWSTLALSNTINGTEFAA*CNRIFP
Trigger: AGGAAAGATCCTGTTGCACCACGCAGCAAACTCTGT...TCCATTTATAGTATTTGACAGTGCCAACGTGGACCAGGCTGTAGCAGGGGCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672652.1
CDS-3UTR CCA 90 bp AAGTGGAGTCTACACAGACAGAGATGGGGAAAGGAAGGTGCTTCGTCTCCACCTTTTACAAAGGCATCATaGATGCCCCTTTGCACCAAG +
Preference number: 4 (lower is better)
Translates to: KWSLHRQRWGKEGASSPPFTKAS*MPLCTK
Trigger: CTTGGTGCAAAGGGGCATCCATGATGCCTTTGTAAA...AGGTGGAGACGAAGCACCTTCCTTTCCCCATCTCTGTCTGTGTAGACTCCACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp GAGGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGCACATTCGGTGTCTTTCTCCAGATCTGGGCTaGGTCTTGAGAGTAAAAATA +
Preference number: 4 (lower is better)
Translates to: EGSLKPLPQHLQMHIRCLSPDLG*VLRVKI
Trigger: TATTTTTACTCTCAAGACCCAGCCCAGATCTGGAGA...AAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp GGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGCACATTCGGTGTCTTCTTCTCCAGATCTGGGCTaGGTCTTGAGAGTAAAAATA +
Preference number: 4 (lower is better)
Translates to: GFTQTSAATPPDAHSVSSSPDLG*VLRVKI
Trigger: TATTTTTACTCTCAAGACCCAGCCCAGATCTGGAGA...AGAAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp AAGTGGAGTCTACACAGACAGAGATGGGGAAAGGAAGGTGCTTCGTCTCCACCTGCACGTGGCACATATTaGTCCCTAGTTACATTAAGG +
Preference number: 4 (lower is better)
Translates to: KWSLHRQRWGKEGASSPPARGTY*SLVTLR
Trigger: CCTTAATGTAACTAGGGACCAATATGTGCCACGTGC...AGGTGGAGACGAAGCACCTTCCTTTCCCCATCTCTGTCTGTGTAGACTCCACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp CATCCTACCAAGCTGCTTCTGCTATTCTTTGCTTTACACTTCAGCTCATTTACTTCTTCTGTGCTGAGCTaGCAGATGCCGGGGAGGGGT +
Preference number: 4 (lower is better)
Translates to: HPTKLLLLFFALHFSSFTSSVLS*QMPGRG
Trigger: ACCCCTCCCCGGCATCTGCCAGCTCAGCACAGAAGA...AGTAAATGAGCTGAAGTGTAAAGCAAAGAATAGCAGAAGCAGCTTGGTAGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp TTATTGTCTTTGAAAGAGGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGACTGTATCCATGGGATaGGAGGTGCTGAACACACGC +
Preference number: 4 (lower is better)
Translates to: LLSLKEGSLKPLPQHLQMTVSMG*EVLNTR
Trigger: GCGTGTGTTCAGCACCTCCCATCCCATGGATACAGT...CATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCCTCTTTCAAAGACAATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp TCAAACCTCTGCCGCAACACCTCCAGATGCACATTCGGTGTCTTCTGTGCTGAGCTTTTACTTTCTCTCTaGCTCACAGTATCGCAAGGA +
Preference number: 4 (lower is better)
Translates to: SNLCRNTSRCTFGVFCAELLLSL*LTVSQG
Trigger: TCCTTGCGATACTGTGAGCCAGAGAGAAAGTAAAAG...CTCAGCACAGAAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGAGGTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp ATTGTCTTTGAAAGAGGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGCACTACACAGACAGAGATaGGGAAAGGAAGGTGCTTCG +
Preference number: 4 (lower is better)
Translates to: IVFERGFTQTSAATPPDALHRQR*GKEGAS
Trigger: CGAAGCACCTTCCTTTCCCCATCTCTGTCTGTGTAG...TGCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCCTCTTTCAAAGACAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp GAGGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGCACATTCGGTGTCTTACCACAAGATGTAAGTaGAGTCTACACAGACAGAGA +
Preference number: 4 (lower is better)
Translates to: EGSLKPLPQHLQMHIRCLTTRCK*SLHRQR
Trigger: TCTCTGTCTGTGTAGACTCCACTTACATCTTGTGGT...AAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp CTGGTCCACGTTGGCACTGTCAAATACTATAAATGGAGCAAGGCCGCCCAGCTCACCACAAGATGTAAGTaGAGTCTACACAGACAGAGA +
Preference number: 4 (lower is better)
Translates to: LVHVGTVKYYKWSKAAQLTTRCK*SLHRQR
Trigger: TCTCTGTCTGTGTAGACTCCACTTACATCTTGTGGT...GAGCTGGGCGGCCTTGCTCCATTTATAGTATTTGACAGTGCCAACGTGGACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672652.1
CDS-3UTR CCA 90 bp TTCCTTCCACAACCCAGAATAACCACAAGATGTAAGTGGAGTCTACACAGACAGGGGACCTTGGGAATGTaGCTAGTACACTCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: FLPQPRITTRCKWSLHRQGTLGM*LVHSRP
Trigger: TGGCCTGGAGTGTACTAGCCACATTCCCAAGGTCCC...CTGTCTGTGTAGACTCCACTTACATCTTGTGGTTATTCTGGGTTGTGGAAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp GTGCTATTTATTGTCTTTGAAAGAGGGTTCACTCAAACCTCTGCCGCAACACCTGGGACCTTGGGAATGTaGCTAGTACACTCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: VLFIVFERGFTQTSAATPGTLGM*LVHSRP
Trigger: TGGCCTGGAGTGTACTAGCCACATTCCCAAGGTCCC...AGGTGTTGCGGCAGAGGTTTGAGTGAACCCTCTTTCAAAGACAATAAATAGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp CCTGCTACAGCCTGGTCCACGTTGGCACTGTCAAATACTATAAATGGAGCAAGGTCAATATCTCCCTCTTaGTCTAGATCAGGAGCTGGC +
Preference number: 4 (lower is better)
Translates to: PATAWSTLALSNTINGARSISPS*SRSGAG
Trigger: GCCAGCTCCTGATCTAGACCAAGAGGGAGATATTGA...CCTTGCTCCATTTATAGTATTTGACAGTGCCAACGTGGACCAGGCTGTAGCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672652.1
CDS-3UTR TCA 90 bp ATTGTCTTTGAAAGAGGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGCAAACATTGTATACACCTaGAGGAATCCCAGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: IVFERGFTQTSAATPPDANIVYT*RNPSLA
Trigger: AGCCAGGCTGGGATTCCTTCAGGTGTATACAATGTT...TGCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCCTCTTTCAAAGACAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672652.1
CDS-3UTR TCA 90 bp GAGGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGCACATTCGGTGTCTTCGTAACACACATACTTaGGTTCCAGATACTCATCAA +
Preference number: 4 (lower is better)
Translates to: EGSLKPLPQHLQMHIRCLRNTHT*VPDTHQ
Trigger: TTGATGAGTATCTGGAACTCAAGTATGTGTGTTACG...AAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR TCA 90 bp AAGTGGAGTCTACACAGACAGAGATGGGGAAAGGAAGGTGCTTCGTCTCCACCTTCTGGCCTCAATTTATaGACCCATGAGCCAAATATG +
Preference number: 4 (lower is better)
Translates to: KWSLHRQRWGKEGASSPPSGLNL*THEPNM
Trigger: CATATTTGGCTCATGGGTTCATAAATTGAGGCCAGA...AGGTGGAGACGAAGCACCTTCCTTTCCCCATCTCTGTCTGTGTAGACTCCACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR TCA 90 bp TCAGTACAAATTGCCTCCCCTACTTCCTTGGCATTCTTTCGAGAACAGGGAATACTGGGAAGTTCCTGCTaGGAACTCACGGTAGCTATG +
Preference number: 4 (lower is better)
Translates to: SVQIASPTSLAFFREQGILGSSC*ELTVAM
Trigger: CATAGCTACCGTGAGTTCTCAGCAGGAACTTCCCAG...TATTCCCTGTTCTCGAAAGAATGCCAAGGAAGTAGGGGAGGCAATTTGTACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672652.1
CDS-3UTR TCA 90 bp TCCCCTACTTCCTTGGCATTCTTTCGAGAACAGGGAATAACATTGTATACACCTAGCTACAGCCAGCAGTaGAGGGAAGTCAGCGGCTTT +
Preference number: 4 (lower is better)
Translates to: SPTSLAFFREQGITLYTPSYSQQ*REVSGF
Trigger: AAAGCCGCTGACTTCCCTTCACTGCTGGCTGTAGCT...AGGTGTATACAATGTTATTCCCTGTTCTCGAAAGAATGCCAAGGAAGTAGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672557.1
CDS-3UTR GCA 90 bp GTTAGCGATTGCTATAGCCTCCTCCTCTGTATCGAACTTGATAACTGGTGCCAGGAGTTTGCTGCGTGGTaGAACAGGATCTTTCCTGTA +
Preference number: 4 (lower is better)
Translates to: VSDCYSLLLCIELDNWCQEFAAW*NRIFPV
Trigger: TACAGGAAAGATCCTGTTGCACCACGCAGCAAACTC...CTGGCACCAGTTATCAAGTTCGATACAGAGGAGGAGGCTATAGCAATCGCTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672652.1
CDS-3UTR GCA 90 bp CATTACCTACGCGCAGGTTCTTCTTCATGGCCTCGGCGAATGCTTTTACAAAGGCAAAGGCATCATGGATaGCCCTTTGCACCAAGAATT +
Preference number: 4 (lower is better)
Translates to: HYLRAGSSSWPRRMLLQRQRHHG*PFAPRI
Trigger: AATTCTTGGTGCAAAGGGGCATCCATGATGCCTTTG...CCTTTGTAAAAGCATTCGCCGAGGCCATGAAGAAGAACCTGCGCGTAGGTAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672652.1
CDS-3UTR GCA 90 bp CCACAACCCAGAATAACCACAAGATGTAAGTGGAGTCTACACAGACAGAGATGGAGCTGCGTTAGCGATTaGTATAGCCTCCTCCTCTGT +
Preference number: 4 (lower is better)
Translates to: PQPRITTRCKWSLHRQRWSCVSD*YSLLLC
Trigger: ACAGAGGAGGAGGCTATAGCAATCGCTAACGCAGCT...CCATCTCTGTCTGTGTAGACTCCACTTACATCTTGTGGTTATTCTGGGTTGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp CTATGCCAGAAAAGTACTTTCTTCACAGGAGGTGTTGAAATAATGCCGGATAAACGCCCAAGGCCGGACTaGTTCACTCCACCAAAAGGG +
Preference number: 4 (lower is better)
Translates to: LCQKSTFFTGGVEIMPDKRPRPD*FTPPKG
Trigger: CCCTTTTGGTGGAGTGAAGCAGTCCGGCCTTGGGCG...TTTATCCGGCATTATTTCAACACCTCCTGTGAAGAAAGTACTTTTCTGGCATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp GAGGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGCACATTCGGTGTCTTGGCAGGGGTAGGATTTaGATCTGTTTAAGATTACAA +
Preference number: 4 (lower is better)
Translates to: EGSLKPLPQHLQMHIRCLGRGRI*ICLRLQ
Trigger: TTGTAATCTTAAACAGATGCAAATCCTACCCCTGCC...AAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp GTGCTATTTATTGTCTTTGAAAGAGGGTTCACTCAAACCTCTGCCGCAACACCTAGGAATAGGGAGAGGTaGTCCTTCGTGCCTCACAGA +
Preference number: 4 (lower is better)
Translates to: VLFIVFERGFTQTSAATPRNRER*SFVPHR
Trigger: TCTGTGAGGCACGAAGGAGCACCTCTCCCTATTCCT...AGGTGTTGCGGCAGAGGTTTGAGTGAACCCTCTTTCAAAGACAATAAATAGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp AATTCAAGGGCTCATGCCTCTTCTACAAAGTGGGTTGGCAATTACAGAAATTCTGGCCATGCCACTGCGTaGCTTCCATCCTACCAAGCT +
Preference number: 4 (lower is better)
Translates to: NSRAHASSTKWVGNYRNSGHATA*LPSYQA
Trigger: AGCTTGGTAGGATGGAAGGCACGCAGTGGCATGGCC...AGAATTTCTGTAATTGCCAACCCACTTTGTAGAAGAGGCATGAGCCCTTGAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp TTCACTCAAACCTCTGCCGCAACACCTCCAGATGCACATTCGGTGTCTTCTGTGGGGTTCAGGAGTAATTaGATCCAGCACTACTTTCAT +
Preference number: 4 (lower is better)
Translates to: FTQTSAATPPDAHSVSSVGFRSN*IQHYFH
Trigger: ATGAAAGTAGTGCTGGATGCAATTACTCCTGAACCC...CACAGAAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp TGCCTCTTCTACAAAGTGGGTTGGCAATTACAGAAATTCTTTCCCTTTTGGGTTGTGATCTCTGCTCACTaGAAGCTCCGCCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: CLFYKVGWQLQKFFPFWVVISAH*KLRLLG
Trigger: ACCCAGGAGGCGGAGCTTGCAGTGAGCAGAGATCAC...AACCCAAAAGGGAAAGAATTTCTGTAATTGCCAACCCACTTTGTAGAAGAGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp CAGGCACGTGGCACATATTGGTCCCTAGTTACATTAAGGGCAGGGGTAGGATTTCCAACTATTCAACTCTaGCAAGAAAGCAGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: QARGTYWSLVTLRAGVGFPTIQL*QESSPR
Trigger: TCTGGGACTGCTTTCTTGGCAGAGTTGAATAGTTGG...AAATCCTACCCCTGCCCTTAATGTAACTAGGGACCAATATGTGCCACGTGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp AGGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGCACATTCGGTGTCTTCTTTAATGAGAATCCCTaGATAGCTGGAGGAAGTTCA +
Preference number: 4 (lower is better)
Translates to: RVHSNLCRNTSRCTFGVFFNENP*IAGGSS
Trigger: TGAACTTCCTCCAGCTATGCAGGGATTCTCATTAAA...GAAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp AGGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGCACATTCGGTGTCTTCAATCACACAGCTCTCTaGAGACTAGACACTAAAACA +
Preference number: 4 (lower is better)
Translates to: RVHSNLCRNTSRCTFGVFNHTAL*RLDTKT
Trigger: TGTTTTAGTGTCTAGTCTGCAGAGAGCTGTGTGATT...GAAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357578.8
ENST00000672352.1
CDS-3UTR CCA 90 bp TGCCTCTTCTACAAAGTGGGTTGGCAATTACAGAAATTCTTTCCCTTTTGGGTTATGAACTCCTCTCCTTaGCGGAGACCTCCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: CLFYKVGWQLQKFFPFWVMNSSP*RRPPSS
Trigger: GCTGGAGGGAGGTCTCCGCCAAGGAGAGGAGTTCAT...AACCCAAAAGGGAAAGAATTTCTGTAATTGCCAACCCACTTTGTAGAAGAGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp ATTGTCTTTGAAAGAGGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGCAATCGAACTTGATAACTaGTGCCAGAGGCCCGAAAGT +
Preference number: 4 (lower is better)
Translates to: IVFERGFTQTSAATPPDAIELDN*CQRPES
Trigger: ACTTTCGGGCCTCTGGCACCAGTTATCAAGTTCGAT...TGCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCCTCTTTCAAAGACAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp TTCCTTCCACAACCCAGAATAACCACAAGATGTAAGTGGAGTCTACACAGACAGTGTTCTGTAGCGACATaGGGGATGGTTGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: FLPQPRITTRCKWSLHRQCSVAT*GMVVPL
Trigger: CAGTGGCACAACCATCCCCCATGTCGCTACAGAACA...CTGTCTGTGTAGACTCCACTTACATCTTGTGGTTATTCTGGGTTGTGGAAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp AGTACAAATTGCCTCCCCTACTTCCTTGGCATTCTTTCGAGAACAGGGAATAACACTGTATCCATGGGATaGGAGGTGCTGAACACACGC +
Preference number: 4 (lower is better)
Translates to: STNCLPYFLGILSRTGNNTVSMG*EVLNTR
Trigger: GCGTGTGTTCAGCACCTCCCATCCCATGGATACAGT...GTTATTCCCTGTTCTCGAAAGAATGCCAAGGAAGTAGGGGAGGCAATTTGTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672652.1
CDS-3UTR CCA 90 bp GTGATTCTTGACAGGGCCGGGGCACTGTCACTAGGAGATGAATTTCAGCTCTTCCTTTTACTTTCTCTCTaGCTCACAGTATCGCAAGGA +
Preference number: 4 (lower is better)
Translates to: VILDRAGALSLGDEFQLFLLLSL*LTVSQG
Trigger: TCCTTGCGATACTGTGAGCCAGAGAGAAAGTAAAAG...GAAGAGCTGAAATTCATCTCCTAGTGACAGTGCCCCGGCCCTGTCAAGAATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp GAGGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGCACATTCGGTGTCTTACTTGGCCGCCTAATTaGATTTGCATCTGTTTAAGA +
Preference number: 4 (lower is better)
Translates to: EGSLKPLPQHLQMHIRCLTWPPN*ICICLR
Trigger: TCTTAAACAGATGCAAATCCAATTAGGCGGCCAAGT...AAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp GAGGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGCACATTCGGTGTCTTATGTTAAATCCTAGGTaGGGTTCAGGAGTAATTGCA +
Preference number: 4 (lower is better)
Translates to: EGSLKPLPQHLQMHIRCLMLNPR*GSGVIA
Trigger: TGCAATTACTCCTGAACCCCACCTAGGATTTAACAT...AAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp ATCGCTGGGAAGTTCCTGCTGAGAACTCACGGTAGCTATGCCAGAAAAGTACTTTCAATATCTCCCTCTTaGTCTAGATCAGGAGCTGGC +
Preference number: 4 (lower is better)
Translates to: IAGKFLLRTHGSYARKVLSISPS*SRSGAG
Trigger: GCCAGCTCCTGATCTAGACCAAGAGGGAGATATTGA...AAGTACTTTTCTGGCATAGCTACCGTGAGTTCTCAGCAGGAACTTCCCAGCGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR TCA 90 bp AAGTGGAGTCTACACAGACAGAGATGGGGAAAGGAAGGTGCTTCGTCTCCACCTTTAATTAATGGGCCCTaGGTAGTTCCTTCCTCAAAT +
Preference number: 4 (lower is better)
Translates to: KWSLHRQRWGKEGASSPPLINGP*VVPSSN
Trigger: ATTTGAGGAAGGAACTACTCAGGGCCCATTAATTAA...AGGTGGAGACGAAGCACCTTCCTTTCCCCATCTCTGTCTGTGTAGACTCCACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp ACTCTAGGAAAAAGGCGGAATAGAGAATTTCTCCATGTGCCTCCTTCAGTGGCTGAGTTTGCTGCGTGGTaGAACAGGATCTTTCCTGTA +
Preference number: 4 (lower is better)
Translates to: TLGKRRNREFLHVPPSVAEFAAW*NRIFPV
Trigger: TACAGGAAAGATCCTGTTGCACCACGCAGCAAACTC...AGCCACTGAAGGAGGCACATGGAGAAATTCTCTATTCCGCCTTTTTCCTAGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672557.1
CDS-3UTR GCA 90 bp TGGCACATATTGGTCCCTAGTTACATTAAGGGCAGGGGTAGGATTTGCATCTGTCCTTTTCACAGAGTTTaGTGCGTGGTGCAACAGGAT +
Preference number: 4 (lower is better)
Translates to: WHILVPSYIKGRGRICICPFHRV*CVVQQD
Trigger: ATCCTGTTGCACCACGCAGCAAACTCTGTGAAAAGG...ACAGATGCAAATCCTACCCCTGCCCTTAATGTAACTAGGGACCAATATGTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp TTATTGTCTTTGAAAGAGGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGCATGGCCTCGGCGAATaGTTTTACAAAGGCATCATG +
Preference number: 4 (lower is better)
Translates to: LLSLKEGSLKPLPQHLQMHGLGE*FYKGIM
Trigger: CATGATGCCTTTGTAAAAGCATTCGCCGAGGCCATG...CATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCCTCTTTCAAAGACAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp GATCAGTACAAATTGCCTCCCCTACTTCCTTGGCATTCTTTCGAGAACAGGGAACATGGCCTCGGCGAATaGTTTTACAAAGGCATCATG +
Preference number: 4 (lower is better)
Translates to: DQYKLPPLLPWHSFENREHGLGE*FYKGIM
Trigger: CATGATGCCTTTGTAAAAGCATTCGCCGAGGCCATG...TTCCCTGTTCTCGAAAGAATGCCAAGGAAGTAGGGGAGGCAATTTGTACTGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672652.1
CDS-3UTR GCA 90 bp TTCCTTCCACAACCCAGAATAACCACAAGATGTAAGTGGAGTCTACACAGACAGGAACTTGATAACTGGTaGCAGAGGCCCGAAAGTCTC +
Preference number: 4 (lower is better)
Translates to: FLPQPRITTRCKWSLHRQELDNW*QRPESL
Trigger: GAGACTTTCGGGCCTCTGGCACCAGTTATCAAGTTC...CTGTCTGTGTAGACTCCACTTACATCTTGTGGTTATTCTGGGTTGTGGAAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp AAGTTCCTGCTGAGAACTCACGGTAGCTATGCCAGAAAAGTACTTTCTTCACAGCGCAACACCTCCAGATaGACATTCGGTGTCTTCTGT +
Preference number: 4 (lower is better)
Translates to: KFLLRTHGSYARKVLSSQRNTSR*TFGVFC
Trigger: ACAGAAGACACCGAATGTGCATCTGGAGGTGTTGCG...CTGTGAAGAAAGTACTTTTCTGGCATAGCTACCGTGAGTTCTCAGCAGGAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp CCATCCTACCAAGCTGCTTCTGCTATTCTTTGCTTTACACTTCAGCTCATTTACGTTCACTCAAACCTCTaGCGCAACACCTCCAGATGC +
Preference number: 4 (lower is better)
Translates to: PSYQAASAILCFTLQLIYVHSNL*RNTSRC
Trigger: GCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAAC...GTAAATGAGCTGAAGTGTAAAGCAAAGAATAGCAGAAGCAGCTTGGTAGGATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp CAGGCACGTGGCACATATTGGTCCCTAGTTACATTAAGGGCAGGGGTAGGATTTTCCATCCTACCAAGCTaGTTCTGCTATTCTTTGCTT +
Preference number: 4 (lower is better)
Translates to: QARGTYWSLVTLRAGVGFSILPS*FCYSLL
Trigger: AAGCAAAGAATAGCAGAAGCAGCTTGGTAGGATGGA...AAATCCTACCCCTGCCCTTAATGTAACTAGGGACCAATATGTGCCACGTGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp GGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGCACATTCGGTGTCTTCTTCATTAGATAAAAGGTaGCTGAAATTCAAGGGCTCA +
Preference number: 4 (lower is better)
Translates to: GFTQTSAATPPDAHSVSSSLDKR*LKFKGS
Trigger: TGAGCCCTTGAATTTCAGGCACCTTTTATCTAATGA...AGAAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp TTTATTGTCTTTGAAAGAGGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATCCTCCCCTACTTCCTTaGCATTCTTTCGAGAACAGG +
Preference number: 4 (lower is better)
Translates to: FIVFERGFTQTSAATPPDPPLLP*HSFENR
Trigger: CCTGTTCTCGAAAGAATGCCAAGGAAGTAGGGGAGG...ATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCCTCTTTCAAAGACAATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672652.1
CDS-3UTR CCA 90 bp CCACAACCCAGAATAACCACAAGATGTAAGTGGAGTCTACACAGACAGAGATGGACAGAGTTTGCTGCGTaGTGCAACAGGATCTTTCCT +
Preference number: 4 (lower is better)
Translates to: PQPRITTRCKWSLHRQRWTEFAA*CNRIFP
Trigger: AGGAAAGATCCTGTTGCACCACGCAGCAAACTCTGT...CCATCTCTGTCTGTGTAGACTCCACTTACATCTTGTGGTTATTCTGGGTTGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357578.8
ENST00000672652.1
CDS-3UTR CCA 90 bp TTCTCTTTCTTCCCACAACCAAGGGCCATTTTACTAAACAATAAGCTATTTCCTGCCCCTGCTACAGCCTaGTCCACGTTGGCACTGTCA +
Preference number: 4 (lower is better)
Translates to: FSFFPQPRAILLNNKLFPAPATA*STLALS
Trigger: TGACAGTGCCAACGTGGACCAGGCTGTAGCAGGGGC...AGGAAATAGCTTATTGTTTAGTAAAATGGCCCTTGGTTGTGGGAAGAAAGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp ATCGCTGGGAAGTTCCTGCTGAGAACTCACGGTAGCTATGCCAGAAAAGTACTTTTTACAAAGGCATCATaGATGCCCCTTTGCACCAAG +
Preference number: 4 (lower is better)
Translates to: IAGKFLLRTHGSYARKVLFTKAS*MPLCTK
Trigger: CTTGGTGCAAAGGGGCATCCATGATGCCTTTGTAAA...AAGTACTTTTCTGGCATAGCTACCGTGAGTTCTCAGCAGGAACTTCCCAGCGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp TTATTGTCTTTGAAAGAGGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGGCAGGTTCTTCTTCATaGCCTCGGCGAATGCTTTTA +
Preference number: 4 (lower is better)
Translates to: LLSLKEGSLKPLPQHLQMAGSSS*PRRMLL
Trigger: TAAAAGCATTCGCCGAGGCCATGAAGAAGAACCTGC...CATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCCTCTTTCAAAGACAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp GATCAGTACAAATTGCCTCCCCTACTTCCTTGGCATTCTTTCGAGAACAGGGAAGCAGGTTCTTCTTCATaGCCTCGGCGAATGCTTTTA +
Preference number: 4 (lower is better)
Translates to: DQYKLPPLLPWHSFENREAGSSS*PRRMLL
Trigger: TAAAAGCATTCGCCGAGGCCATGAAGAAGAACCTGC...TTCCCTGTTCTCGAAAGAATGCCAAGGAAGTAGGGGAGGCAATTTGTACTGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672652.1
CDS-3UTR CCA 90 bp TGGCACATATTGGTCCCTAGTTACATTAAGGGCAGGGGTAGGATTTGCATCTGTATCGAACTTGATAACTaGTGCCAGAGGCCCGAAAGT +
Preference number: 4 (lower is better)
Translates to: WHILVPSYIKGRGRICICIELDN*CQRPES
Trigger: ACTTTCGGGCCTCTGGCACCAGTTATCAAGTTCGAT...ACAGATGCAAATCCTACCCCTGCCCTTAATGTAACTAGGGACCAATATGTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp TGCCTCTTCTACAAAGTGGGTTGGCAATTACAGAAATTCTTTCCCTTTTGGGTTCATCAATGCCATACTTaGACCCCTCTCGCCCAAGGC +
Preference number: 4 (lower is better)
Translates to: CLFYKVGWQLQKFFPFWVHQCHT*TPLAQG
Trigger: GCCTTGGGCGAGAGGGGTCCAAGTATGGCATTGATG...AACCCAAAAGGGAAAGAATTTCTGTAATTGCCAACCCACTTTGTAGAAGAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp AGGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGCACATTCGGTGTCTTCTATACAATGAGTCTCTaGCCTCAATTTATGAACCCA +
Preference number: 4 (lower is better)
Translates to: RVHSNLCRNTSRCTFGVFYTMSL*PQFMNP
Trigger: TGGGTTCATAAATTGAGGCCAGAGACTCATTGTATA...GAAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR TCA 90 bp TTATTGTCTTTGAAAGAGGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGCACCAAGAATTGGTTTaGGCAAACACAAGTCTGTCC +
Preference number: 4 (lower is better)
Translates to: LLSLKEGSLKPLPQHLQMHQELV*ANTSLS
Trigger: GGACAGACTTGTGTTTGCTCAAACCAATTCTTGGTG...CATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCCTCTTTCAAAGACAATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR TCA 90 bp TGGCACATATTGGTCCCTAGTTACATTAAGGGCAGGGGTAGGATTTGCATCTGTCACCAAGAATTGGTTTaGGCAAACACAAGTCTGTCC +
Preference number: 4 (lower is better)
Translates to: WHILVPSYIKGRGRICICHQELV*ANTSLS
Trigger: GGACAGACTTGTGTTTGCTCAAACCAATTCTTGGTG...ACAGATGCAAATCCTACCCCTGCCCTTAATGTAACTAGGGACCAATATGTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR TCA 90 bp CCACAACCCAGAATAACCACAAGATGTAAGTGGAGTCTACACAGACAGAGATGGCACCAAGAATTGGTTTaGGCAAACACAAGTCTGTCC +
Preference number: 4 (lower is better)
Translates to: PQPRITTRCKWSLHRQRWHQELV*ANTSLS
Trigger: GGACAGACTTGTGTTTGCTCAAACCAATTCTTGGTG...CCATCTCTGTCTGTGTAGACTCCACTTACATCTTGTGGTTATTCTGGGTTGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR TCA 90 bp TGGCACATATTGGTCCCTAGTTACATTAAGGGCAGGGGTAGGATTTGCATCTGTAAATTAATCCTTCGTTaGCGCCAACCATGCCCACTT +
Preference number: 4 (lower is better)
Translates to: WHILVPSYIKGRGRICICKLILR*RQPCPL
Trigger: AAGTGGGCATGGTTGGCGTCAACGAAGGATTAATTT...ACAGATGCAAATCCTACCCCTGCCCTTAATGTAACTAGGGACCAATATGTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR TCA 90 bp ATCGCTGGGAAGTTCCTGCTGAGAACTCACGGTAGCTATGCCAGAAAAGTACTTACTGTCACTAGGAGATaGATTTCAGCTCTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: IAGKFLLRTHGSYARKVLTVTRR*ISALPS
Trigger: AGAAGGAAGAGCTGAAATTCATCTCCTAGTGACAGT...AAGTACTTTTCTGGCATAGCTACCGTGAGTTCTCAGCAGGAACTTCCCAGCGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR TCA 90 bp GTGATTCTTGACAGGGCCGGGGCACTGTCACTAGGAGATGAATTTCAGCTCTTCATCAAGGATATACAATaGGTCTCTGGCCTCAATTTA +
Preference number: 4 (lower is better)
Translates to: VILDRAGALSLGDEFQLFIKDIQ*VSGLNL
Trigger: TAAATTGAGGCCAGAGACTCATTGTATATCCTTGAT...GAAGAGCTGAAATTCATCTCCTAGTGACAGTGCCCCGGCCCTGTCAAGAATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp GTGCTATTTATTGTCTTTGAAAGAGGGTTCACTCAAACCTCTGCCGCAACACCTCCTTTTCACAGAGTTTaGTGCGTGGTGCAACAGGAT +
Preference number: 4 (lower is better)
Translates to: VLFIVFERGFTQTSAATPPFHRV*CVVQQD
Trigger: ATCCTGTTGCACCACGCAGCAAACTCTGTGAAAAGG...AGGTGTTGCGGCAGAGGTTTGAGTGAACCCTCTTTCAAAGACAATAAATAGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp TTTATTGTCTTTGAAAGAGGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATCCAGATACTCATCAATaGCATACTTGGACCCCTCTC +
Preference number: 4 (lower is better)
Translates to: FIVFERGFTQTSAATPPDPDTHQ*HTWTPL
Trigger: GAGAGGGGTCCAAGTATGGCATTGATGAGTATCTGG...ATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCCTCTTTCAAAGACAATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp AGTACAAATTGCCTCCCCTACTTCCTTGGCATTCTTTCGAGAACAGGGAATAACCCAGATACTCATCAATaGCATACTTGGACCCCTCTC +
Preference number: 4 (lower is better)
Translates to: STNCLPYFLGILSRTGNNPDTHQ*HTWTPL
Trigger: GAGAGGGGTCCAAGTATGGCATTGATGAGTATCTGG...GTTATTCCCTGTTCTCGAAAGAATGCCAAGGAAGTAGGGGAGGCAATTTGTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672652.1
CDS-3UTR GCA 90 bp CATTACCTACGCGCAGGTTCTTCTTCATGGCCTCGGCGAATGCTTTTACAAAGGGGCAGGGGTAGGATTTaGATCTGTTTAAGATTACAA +
Preference number: 4 (lower is better)
Translates to: HYLRAGSSSWPRRMLLQRGRGRI*ICLRLQ
Trigger: TTGTAATCTTAAACAGATGCAAATCCTACCCCTGCC...CCTTTGTAAAAGCATTCGCCGAGGCCATGAAGAAGAACCTGCGCGTAGGTAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000672652.1
CDS-3UTR GCA 90 bp AATTCAAGGGCTCATGCCTCTTCTACAAAGTGGGTTGGCAATTACAGAAATTCTGTTCACTCAAACCTCTaGCGCAACACCTCCAGATGC +
Preference number: 4 (lower is better)
Translates to: NSRAHASSTKWVGNYRNSVHSNL*RNTSRC
Trigger: GCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAAC...AGAATTTCTGTAATTGCCAACCCACTTTGTAGAAGAGGCATGAGCCCTTGAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp CCATCCTACCAAGCTGCTTCTGCTATTCTTTGCTTTACACTTCAGCTCATTTACCCTCCCCTACTTCCTTaGCATTCTTTCGAGAACAGG +
Preference number: 4 (lower is better)
Translates to: PSYQAASAILCFTLQLIYPPLLP*HSFENR
Trigger: CCTGTTCTCGAAAGAATGCCAAGGAAGTAGGGGAGG...GTAAATGAGCTGAAGTGTAAAGCAAAGAATAGCAGAAGCAGCTTGGTAGGATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357578.8
ENST00000672652.1
CDS-3UTR CCA 90 bp AATTGCCTCCCCTACTTCCTTGGCATTCTTTCGAGAACAGGGAATAACATTGTACCTCCCCTACTTCCTTaGCATTCTTTCGAGAACAGG +
Preference number: 4 (lower is better)
Translates to: NCLPYFLGILSRTGNNIVPPLLP*HSFENR
Trigger: CCTGTTCTCGAAAGAATGCCAAGGAAGTAGGGGAGG...TACAATGTTATTCCCTGTTCTCGAAAGAATGCCAAGGAAGTAGGGGAGGCAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672557.1
ENST00000672652.1
CDS-3UTR CCA 90 bp GTGCTATTTATTGTCTTTGAAAGAGGGTTCACTCAAACCTCTGCCGCAACACCTATCGAACTTGATAACTaGTGCCAGAGGCCCGAAAGT +
Preference number: 4 (lower is better)
Translates to: VLFIVFERGFTQTSAATPIELDN*CQRPES
Trigger: ACTTTCGGGCCTCTGGCACCAGTTATCAAGTTCGAT...AGGTGTTGCGGCAGAGGTTTGAGTGAACCCTCTTTCAAAGACAATAAATAGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp CTATGCCAGAAAAGTACTTTCTTCACAGGAGGTGTTGAAATAATGCCGGATAAAGCAGCCACAGGCACGTaGCACATATTGGTCCCTAGT +
Preference number: 4 (lower is better)
Translates to: LCQKSTFFTGGVEIMPDKAATGT*HILVPS
Trigger: ACTAGGGACCAATATGTGCCACGTGCCTGTGGCTGC...TTTATCCGGCATTATTTCAACACCTCCTGTGAAGAAAGTACTTTTCTGGCATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp CCTGCTACAGCCTGGTCCACGTTGGCACTGTCAAATACTATAAATGGAGCAAGGATGTTAAATCCTAGGTaGGGTTCAGGAGTAATTGCA +
Preference number: 4 (lower is better)
Translates to: PATAWSTLALSNTINGARMLNPR*GSGVIA
Trigger: TGCAATTACTCCTGAACCCCACCTAGGATTTAACAT...CCTTGCTCCATTTATAGTATTTGACAGTGCCAACGTGGACCAGGCTGTAGCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672652.1
CDS-3UTR CCA 90 bp GTGATTCTTGACAGGGCCGGGGCACTGTCACTAGGAGATGAATTTCAGCTCTTCTATACAATGAGTCTCTaGCCTCAATTTATGAACCCA +
Preference number: 4 (lower is better)
Translates to: VILDRAGALSLGDEFQLFYTMSL*PQFMNP
Trigger: TGGGTTCATAAATTGAGGCCAGAGACTCATTGTATA...GAAGAGCTGAAATTCATCTCCTAGTGACAGTGCCCCGGCCCTGTCAAGAATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp TTCACTCAAACCTCTGCCGCAACACCTCCAGATGCACATTCGGTGTCTTCTGTGGCTTGCAAGCAACAATaGATCCAAATCAAGAAGAAA +
Preference number: 4 (lower is better)
Translates to: FTQTSAATPPDAHSVSSVACKQQ*IQIKKK
Trigger: TTTCTTCTTGATTTGGATCCATTGTTGCTTGCAAGC...CACAGAAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348925.2
3UTR CAA 72 bp ACTTCCTTGGCATTCTTTCGAGAACAGGGAATAACATaGTATACACCTGAAGGAATCCCAGCCTGGCTTGCA +
Preference number: 4 (lower is better)
Translates to: TSLAFFREQGIT*YTPEGIPAWLA
Trigger: TGCAAGCCAGGCTGGGATTCCTTCAGGTGTATACAATGTTATTCCCTGTTCTCGAAAGAATGCCAAGGAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672557.1
ENST00000672652.1
CDS-3UTR TCA 90 bp TCCCCTACTTCCTTGGCATTCTTTCGAGAACAGGGAATAACATTGTATACACCTAACATTGTATACACCTaGAGGAATCCCAGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: SPTSLAFFREQGITLYTPNIVYT*RNPSLA
Trigger: AGCCAGGCTGGGATTCCTTCAGGTGTATACAATGTT...AGGTGTATACAATGTTATTCCCTGTTCTCGAAAGAATGCCAAGGAAGTAGGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672557.1
ENST00000672652.1
CDS-3UTR TCA 90 bp ATTGTCTTTGAAAGAGGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGCACGTAACACACATACTTaGGTTCCAGATACTCATCAA +
Preference number: 4 (lower is better)
Translates to: IVFERGFTQTSAATPPDARNTHT*VPDTHQ
Trigger: TTGATGAGTATCTGGAACTCAAGTATGTGTGTTACG...TGCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCCTCTTTCAAAGACAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR TCA 90 bp GTTAGCGATTGCTATAGCCTCCTCCTCTGTATCGAACTTGATAACTGGTGCCAGCGTAACACACATACTTaGGTTCCAGATACTCATCAA +
Preference number: 4 (lower is better)
Translates to: VSDCYSLLLCIELDNWCQRNTHT*VPDTHQ
Trigger: TTGATGAGTATCTGGAACTCAAGTATGTGTGTTACG...CTGGCACCAGTTATCAAGTTCGATACAGAGGAGGAGGCTATAGCAATCGCTAAC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672652.1
CDS-3UTR TCA 90 bp TTATTGTCTTTGAAAGAGGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGACTGTCACTAGGAGATaGATTTCAGCTCTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: LLSLKEGSLKPLPQHLQMTVTRR*ISALPS
Trigger: AGAAGGAAGAGCTGAAATTCATCTCCTAGTGACAGT...CATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCCTCTTTCAAAGACAATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR TCA 90 bp CCACAACCCAGAATAACCACAAGATGTAAGTGGAGTCTACACAGACAGAGATGGAGACAATACCATAAATaGATGGGTGTGGCTATGCTC +
Preference number: 4 (lower is better)
Translates to: PQPRITTRCKWSLHRQRWRQYHK*MGVAML
Trigger: GAGCATAGCCACACCCATTCATTTATGGTATTGTCT...CCATCTCTGTCTGTGTAGACTCCACTTACATCTTGTGGTTATTCTGGGTTGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp CCATCCTACCAAGCTGCTTCTGCTATTCTTTGCTTTACACTTCAGCTCATTTACGTTCCTAAATTTAGATaGCATGGCCCCTGCTACAGC +
Preference number: 4 (lower is better)
Translates to: PSYQAASAILCFTLQLIYVPKFR*HGPCYS
Trigger: GCTGTAGCAGGGGCCATGGCATCTAAATTTAGGAAC...GTAAATGAGCTGAAGTGTAAAGCAAAGAATAGCAGAAGCAGCTTGGTAGGATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp AAGTTCCTGCTGAGAACTCACGGTAGCTATGCCAGAAAAGTACTTTCTTCACAGTCATGGATGCCCCTTTaGACCAAGAATTGGTTTGAG +
Preference number: 4 (lower is better)
Translates to: KFLLRTHGSYARKVLSSQSWMPL*TKNWFE
Trigger: CTCAAACCAATTCTTGGTGCAAAGGGGCATCCATGA...CTGTGAAGAAAGTACTTTTCTGGCATAGCTACCGTGAGTTCTCAGCAGGAACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp TTCCTTCCACAACCCAGAATAACCACAAGATGTAAGTGGAGTCTACACAGACAGCAAAGGCATCATGGATaGCCCTTTGCACCAAGAATT +
Preference number: 4 (lower is better)
Translates to: FLPQPRITTRCKWSLHRQQRHHG*PFAPRI
Trigger: AATTCTTGGTGCAAAGGGGCATCCATGATGCCTTTG...CTGTCTGTGTAGACTCCACTTACATCTTGTGGTTATTCTGGGTTGTGGAAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp CATCCTACCAAGCTGCTTCTGCTATTCTTTGCTTTACACTTCAGCTCATTTACTAGCTGCGTTAGCGATTaGTATAGCCTCCTCCTCTGT +
Preference number: 4 (lower is better)
Translates to: HPTKLLLLFFALHFSSFTSCVSD*YSLLLC
Trigger: ACAGAGGAGGAGGCTATAGCAATCGCTAACGCAGCT...AGTAAATGAGCTGAAGTGTAAAGCAAAGAATAGCAGAAGCAGCTTGGTAGGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp ATTGTCTTTGAAAGAGGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGCAGGCAGGGGTAGGATTTaGATCTGTTTAAGATTACAA +
Preference number: 4 (lower is better)
Translates to: IVFERGFTQTSAATPPDAGRGRI*ICLRLQ
Trigger: TTGTAATCTTAAACAGATGCAAATCCTACCCCTGCC...TGCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCCTCTTTCAAAGACAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp ATCGCTGGGAAGTTCCTGCTGAGAACTCACGGTAGCTATGCCAGAAAAGTACTTCCGCCTAATTGGATTTaGATCTGTTTAAGATTACGG +
Preference number: 4 (lower is better)
Translates to: IAGKFLLRTHGSYARKVLPPNWI*ICLRLR
Trigger: CCGTAATCTTAAACAGATGCAAATCCAATTAGGCGG...AAGTACTTTTCTGGCATAGCTACCGTGAGTTCTCAGCAGGAACTTCCCAGCGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp TTCTCTTTCTTCCCACAACCAAGGGCCATTTTACTAAACAATAAGCTATTTCCTTTCACGCCATTCTCCTaGCTCAGCCTCCAGAGTAGC +
Preference number: 4 (lower is better)
Translates to: FSFFPQPRAILLNNKLFPFTPFS*LSLQSS
Trigger: GCTACTCTGGAGGCTGAGGCAGGAGAATGGCGTGAA...AGGAAATAGCTTATTGTTTAGTAAAATGGCCCTTGGTTGTGGGAAGAAAGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp GTGCTATTTATTGTCTTTGAAAGAGGGTTCACTCAAACCTCTGCCGCAACACCTTTTACAAAGGCATCATaGATGCCCCTTTGCACCAAG +
Preference number: 4 (lower is better)
Translates to: VLFIVFERGFTQTSAATPFTKAS*MPLCTK
Trigger: CTTGGTGCAAAGGGGCATCCATGATGCCTTTGTAAA...AGGTGTTGCGGCAGAGGTTTGAGTGAACCCTCTTTCAAAGACAATAAATAGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp CATCCTACCAAGCTGCTTCTGCTATTCTTTGCTTTACACTTCAGCTCATTTACTTCGTCTCCACCTACTTaGCCGCCTAATTGGATTTGC +
Preference number: 4 (lower is better)
Translates to: HPTKLLLLFFALHFSSFTSSPPT*PPNWIC
Trigger: GCAAATCCAATTAGGCGGCCAAGTAGGTGGAGACGA...AGTAAATGAGCTGAAGTGTAAAGCAAAGAATAGCAGAAGCAGCTTGGTAGGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp AATTCAAGGGCTCATGCCTCTTCTACAAAGTGGGTTGGCAATTACAGAAATTCTCTACACAGACAGAGATaGGGAAAGGAAGGTGCTTCG +
Preference number: 4 (lower is better)
Translates to: NSRAHASSTKWVGNYRNSLHRQR*GKEGAS
Trigger: CGAAGCACCTTCCTTTCCCCATCTCTGTCTGTGTAG...AGAATTTCTGTAATTGCCAACCCACTTTGTAGAAGAGGCATGAGCCCTTGAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
3UTR CAA 72 bp ACAGAAGCACGGACAATTCTGTGCTATTTATTGTCTTaGAAAGAGGGTTCACTCAAACCTCTGCCGCAACAC +
Preference number: 4 (lower is better)
Translates to: TEARTILCYLLS*KEGSLKPLPQH
Trigger: GTGTTGCGGCAGAGGTTTGAGTGAACCCTCTTTCAAAGACAATAAATAGCACAGAATTGTCCGTGCTTCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR TCA 90 bp TGCCTCTTCTACAAAGTGGGTTGGCAATTACAGAAATTCTTTCCCTTTTGGGTTAACATTGTATACACCTaGAGGAATCCCAGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: CLFYKVGWQLQKFFPFWVNIVYT*RNPSLA
Trigger: AGCCAGGCTGGGATTCCTTCAGGTGTATACAATGTT...AACCCAAAAGGGAAAGAATTTCTGTAATTGCCAACCCACTTTGTAGAAGAGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357578.8
ENST00000672652.1
CDS-3UTR TCA 90 bp TTATTGTCTTTGAAAGAGGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGTTAATTAATGGGCCCTaGGTAGTTCCTTCCTCAAAT +
Preference number: 4 (lower is better)
Translates to: LLSLKEGSLKPLPQHLQMLINGP*VVPSSN
Trigger: ATTTGAGGAAGGAACTACTCAGGGCCCATTAATTAA...CATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCCTCTTTCAAAGACAATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR TCA 90 bp TTCTCTTTCTTCCCACAACCAAGGGCCATTTTACTAAACAATAAGCTATTTCCTCCGAAAGTCTCTTCATaGGTGCACAGCATGTCCTGG +
Preference number: 4 (lower is better)
Translates to: FSFFPQPRAILLNNKLFPPKVSS*VHSMSW
Trigger: CCAGGACATGCTGTGCACTCATGAAGAGACTTTCGG...AGGAAATAGCTTATTGTTTAGTAAAATGGCCCTTGGTTGTGGGAAGAAAGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR TCA 90 bp CCATCCTACCAAGCTGCTTCTGCTATTCTTTGCTTTACACTTCAGCTCATTTACAAATTAATCCTTCGTTaGCGCCAACCATGCCCACTT +
Preference number: 4 (lower is better)
Translates to: PSYQAASAILCFTLQLIYKLILR*RQPCPL
Trigger: AAGTGGGCATGGTTGGCGTCAACGAAGGATTAATTT...GTAAATGAGCTGAAGTGTAAAGCAAAGAATAGCAGAAGCAGCTTGGTAGGATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR TCA 90 bp AATTCAAGGGCTCATGCCTCTTCTACAAAGTGGGTTGGCAATTACAGAAATTCTGTCTTTCTTTCAAAGTaGGAGGCAACGCCGGTCATA +
Preference number: 4 (lower is better)
Translates to: NSRAHASSTKWVGNYRNSVFLSK*EATPVI
Trigger: TATGACCGGCGTTGCCTCTCACTTTGAAAGAAAGAC...AGAATTTCTGTAATTGCCAACCCACTTTGTAGAAGAGGCATGAGCCCTTGAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp AAGTTCCTGCTGAGAACTCACGGTAGCTATGCCAGAAAAGTACTTTCTTCACAGTCCATCCTACCAAGCTaGTTCTGCTATTCTTTGCTT +
Preference number: 4 (lower is better)
Translates to: KFLLRTHGSYARKVLSSQSILPS*FCYSLL
Trigger: AAGCAAAGAATAGCAGAAGCAGCTTGGTAGGATGGA...CTGTGAAGAAAGTACTTTTCTGGCATAGCTACCGTGAGTTCTCAGCAGGAACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp TTTATTGTCTTTGAAAGAGGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGGGTTCAGGAGTAATTaGATCCAGCACTACTTTCAT +
Preference number: 4 (lower is better)
Translates to: FIVFERGFTQTSAATPPDGFRSN*IQHYFH
Trigger: ATGAAAGTAGTGCTGGATGCAATTACTCCTGAACCC...ATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCCTCTTTCAAAGACAATAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp GATCAGTACAAATTGCCTCCCCTACTTCCTTGGCATTCTTTCGAGAACAGGGAATTTAATGAGAATCCCTaGATAGCTGGAGGAAGTTCA +
Preference number: 4 (lower is better)
Translates to: DQYKLPPLLPWHSFENREFNENP*IAGGSS
Trigger: TGAACTTCCTCCAGCTATGCAGGGATTCTCATTAAA...TTCCCTGTTCTCGAAAGAATGCCAAGGAAGTAGGGGAGGCAATTTGTACTGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672652.1
CDS-3UTR GCA 90 bp CCACAACCCAGAATAACCACAAGATGTAAGTGGAGTCTACACAGACAGAGATGGAATCACACAGCTCTCTaGAGACTAGACACTAAAACA +
Preference number: 4 (lower is better)
Translates to: PQPRITTRCKWSLHRQRWNHTAL*RLDTKT
Trigger: TGTTTTAGTGTCTAGTCTGCAGAGAGCTGTGTGATT...CCATCTCTGTCTGTGTAGACTCCACTTACATCTTGTGGTTATTCTGGGTTGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357578.8
ENST00000672352.1
CDS-3UTR CCA 90 bp AATTCAAGGGCTCATGCCTCTTCTACAAAGTGGGTTGGCAATTACAGAAATTCTGCAGGTTCTTCTTCATaGCCTCGGCGAATGCTTTTA +
Preference number: 4 (lower is better)
Translates to: NSRAHASSTKWVGNYRNSAGSSS*PRRMLL
Trigger: TAAAAGCATTCGCCGAGGCCATGAAGAAGAACCTGC...AGAATTTCTGTAATTGCCAACCCACTTTGTAGAAGAGGCATGAGCCCTTGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp AATTCAAGGGCTCATGCCTCTTCTACAAAGTGGGTTGGCAATTACAGAAATTCTATCGAACTTGATAACTaGTGCCAGAGGCCCGAAAGT +
Preference number: 4 (lower is better)
Translates to: NSRAHASSTKWVGNYRNSIELDN*CQRPES
Trigger: ACTTTCGGGCCTCTGGCACCAGTTATCAAGTTCGAT...AGAATTTCTGTAATTGCCAACCCACTTTGTAGAAGAGGCATGAGCCCTTGAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp CTATGCCAGAAAAGTACTTTCTTCACAGGAGGTGTTGAAATAATGCCGGATAAACTACACAGACAGAGATaGGGAAAGGAAGGTGCTTCG +
Preference number: 4 (lower is better)
Translates to: LCQKSTFFTGGVEIMPDKLHRQR*GKEGAS
Trigger: CGAAGCACCTTCCTTTCCCCATCTCTGTCTGTGTAG...TTTATCCGGCATTATTTCAACACCTCCTGTGAAGAAAGTACTTTTCTGGCATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp TTCTCTTTCTTCCCACAACCAAGGGCCATTTTACTAAACAATAAGCTATTTCCTACAGAGTTTGCTGCGTaGTGCAACAGGATCTCAGCC +
Preference number: 4 (lower is better)
Translates to: FSFFPQPRAILLNNKLFPTEFAA*CNRISA
Trigger: GGCTGAGATCCTGTTGCACCACGCAGCAAACTCTGT...AGGAAATAGCTTATTGTTTAGTAAAATGGCCCTTGGTTGTGGGAAGAAAGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672352.1
3UTR CAA 72 bp ACCAGAGGATCAGTACAAATTGCCTCCCCTACTTCCTaGGCATTCTTTCGAGAACAGGGAATAACATTGTAT +
Preference number: 4 (lower is better)
Translates to: TRGSVQIASPTS*AFFREQGITLY
Trigger: ATACAATGTTATTCCCTGTTCTCGAAAGAATGCCAAGGAAGTAGGGGAGGCAATTTGTACTGATCCTCTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672557.1
ENST00000672652.1
CDS-3UTR TCA 90 bp CTATGCCAGAAAAGTACTTTCTTCACAGGAGGTGTTGAAATAATGCCGGATAAAAACATTGTATACACCTaGAGGAATCCCAGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: LCQKSTFFTGGVEIMPDKNIVYT*RNPSLA
Trigger: AGCCAGGCTGGGATTCCTTCAGGTGTATACAATGTT...TTTATCCGGCATTATTTCAACACCTCCTGTGAAGAAAGTACTTTTCTGGCATAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357578.8
ENST00000672652.1
CDS-3UTR TCA 90 bp TTTATTGTCTTTGAAAGAGGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATTTAATTAATGGGCCCTaGGTAGTTCCTTCCTCAAAT +
Preference number: 4 (lower is better)
Translates to: FIVFERGFTQTSAATPPDLINGP*VVPSSN
Trigger: ATTTGAGGAAGGAACTACTCAGGGCCCATTAATTAA...ATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCCTCTTTCAAAGACAATAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR TCA 90 bp AATTGCCTCCCCTACTTCCTTGGCATTCTTTCGAGAACAGGGAATAACATTGTAACTGTCACTAGGAGATaGATTTCAGCTCTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: NCLPYFLGILSRTGNNIVTVTRR*ISALPS
Trigger: AGAAGGAAGAGCTGAAATTCATCTCCTAGTGACAGT...TACAATGTTATTCCCTGTTCTCGAAAGAATGCCAAGGAAGTAGGGGAGGCAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672652.1
CDS-3UTR TCA 90 bp TCTGCCAAGAAAGCAGTCCCAGACAATACCATAAATGAATGGGTGTGGCTATGCATCAAGGATATACAATaGGTCTCTGGCCTCAATTTA +
Preference number: 4 (lower is better)
Translates to: SAKKAVPDNTINEWVWLCIKDIQ*VSGLNL
Trigger: TAAATTGAGGCCAGAGACTCATTGTATATCCTTGAT...GCATAGCCACACCCATTCATTTATGGTATTGTCTGGGACTGCTTTCTTGGCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp TTCTCTTTCTTCCCACAACCAAGGGCCATTTTACTAAACAATAAGCTATTTCCTGAACTTGATAACTGGTaGCAGAGGCCCGAAAGTCTC +
Preference number: 4 (lower is better)
Translates to: FSFFPQPRAILLNNKLFPELDNW*QRPESL
Trigger: GAGACTTTCGGGCCTCTGGCACCAGTTATCAAGTTC...AGGAAATAGCTTATTGTTTAGTAAAATGGCCCTTGGTTGTGGGAAGAAAGAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp CCACAACCCAGAATAACCACAAGATGTAAGTGGAGTCTACACAGACAGAGATGGTCATTAGATAAAAGGTaGCTGAAATTCAAGGGCTCA +
Preference number: 4 (lower is better)
Translates to: PQPRITTRCKWSLHRQRWSLDKR*LKFKGS
Trigger: TGAGCCCTTGAATTTCAGGCACCTTTTATCTAATGA...CCATCTCTGTCTGTGTAGACTCCACTTACATCTTGTGGTTATTCTGGGTTGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp TTCTCTTTCTTCCCACAACCAAGGGCCATTTTACTAAACAATAAGCTATTTCCTGTGTGCCCAGGGTCTTaGCAGACCTTTAGTTACTCA +
Preference number: 4 (lower is better)
Translates to: FSFFPQPRAILLNNKLFPVCPGS*QTFSYS
Trigger: TGAGTAACTAAAGGTCTGGCAAGACCCTGGGCACAC...AGGAAATAGCTTATTGTTTAGTAAAATGGCCCTTGGTTGTGGGAAGAAAGAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp GTGCTATTTATTGTCTTTGAAAGAGGGTTCACTCAAACCTCTGCCGCAACACCTAGAAGACTCAAAATTTaGCACCCAGCCAAAGAATCT +
Preference number: 4 (lower is better)
Translates to: VLFIVFERGFTQTSAATPRRLKI*HPAKES
Trigger: AGATTCTTTGGCTGGGTGGCAAATTTTGAGTCTTCT...AGGTGTTGCGGCAGAGGTTTGAGTGAACCCTCTTTCAAAGACAATAAATAGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp TTTATTGTCTTTGAAAGAGGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATAAATCTTTTAGGCTTTaGAGGCTATACTGTCCCTGT +
Preference number: 4 (lower is better)
Translates to: FIVFERGFTQTSAATPPDKSFRL*RLYCPC
Trigger: ACAGGGACAGTATAGCCTGCAAAGCCTAAAAGATTT...ATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCCTCTTTCAAAGACAATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp GTGCTATTTATTGTCTTTGAAAGAGGGTTCACTCAAACCTCTGCCGCAACACCTCTTTGCACCAAGAATTaGTTTGAGCAAACACAAGTC +
Preference number: 4 (lower is better)
Translates to: VLFIVFERGFTQTSAATPLCTKN*FEQTQV
Trigger: GACTTGTGTTTGCTCAAACCAATTCTTGGTGCAAAG...AGGTGTTGCGGCAGAGGTTTGAGTGAACCCTCTTTCAAAGACAATAAATAGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp CCACAACCCAGAATAACCACAAGATGTAAGTGGAGTCTACACAGACAGAGATGGAAATTCTTTCCCTTTTaGGTTGACTGTGGTGAAAGT +
Preference number: 4 (lower is better)
Translates to: PQPRITTRCKWSLHRQRWKFFPF*VDCGES
Trigger: ACTTTCACCACAGTCAACCCAAAAGGGAAAGAATTT...CCATCTCTGTCTGTGTAGACTCCACTTACATCTTGTGGTTATTCTGGGTTGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp GTGCTATTTATTGTCTTTGAAAGAGGGTTCACTCAAACCTCTGCCGCAACACCTGCCTCTTCTACAAAGTaGGTTGGCAATTACAGAAAT +
Preference number: 4 (lower is better)
Translates to: VLFIVFERGFTQTSAATPASSTK*VGNYRN
Trigger: ATTTCTGTAATTGCCAACCCACTTTGTAGAAGAGGC...AGGTGTTGCGGCAGAGGTTTGAGTGAACCCTCTTTCAAAGACAATAAATAGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp GTGCTATTTATTGTCTTTGAAAGAGGGTTCACTCAAACCTCTGCCGCAACACCTACTTGGCCGCCTAATTaGATTTGCATCTGTTTAAGA +
Preference number: 4 (lower is better)
Translates to: VLFIVFERGFTQTSAATPTWPPN*ICICLR
Trigger: TCTTAAACAGATGCAAATCCAATTAGGCGGCCAAGT...AGGTGTTGCGGCAGAGGTTTGAGTGAACCCTCTTTCAAAGACAATAAATAGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp TTATTGTCTTTGAAAGAGGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGTATACAATGAGTCTCTaGCCTCAATTTATGAACCCA +
Preference number: 4 (lower is better)
Translates to: LLSLKEGSLKPLPQHLQMYTMSL*PQFMNP
Trigger: TGGGTTCATAAATTGAGGCCAGAGACTCATTGTATA...CATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCCTCTTTCAAAGACAATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp TGCCTCTTCTACAAAGTGGGTTGGCAATTACAGAAATTCTTTCCCTTTTGGGTTGTACATTATCATCGCTaGGAAGTTCCTGCTGAGAAC +
Preference number: 4 (lower is better)
Translates to: CLFYKVGWQLQKFFPFWVVHYHR*EVPAEN
Trigger: GTTCTCAGCAGGAACTTCCCAGCGATGATAATGTAC...AACCCAAAAGGGAAAGAATTTCTGTAATTGCCAACCCACTTTGTAGAAGAGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR TCA 90 bp ACTTCCTTGGCATTCTTTCGAGAACAGGGAATAACATTGTATACACCTGAAGGATCTGGCCTCAATTTATaGACCCATGAGCCAAATATG +
Preference number: 4 (lower is better)
Translates to: TSLAFFREQGITLYTPEGSGLNL*THEPNM
Trigger: CATATTTGGCTCATGGGTTCATAAATTGAGGCCAGA...TCCTTCAGGTGTATACAATGTTATTCCCTGTTCTCGAAAGAATGCCAAGGAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672652.1
CDS-3UTR TCA 90 bp TGCCTCTTCTACAAAGTGGGTTGGCAATTACAGAAATTCTTTCCCTTTTGGGTTAGACAATACCATAAATaGATGGGTGTGGCTATGCTC +
Preference number: 4 (lower is better)
Translates to: CLFYKVGWQLQKFFPFWVRQYHK*MGVAML
Trigger: GAGCATAGCCACACCCATTCATTTATGGTATTGTCT...AACCCAAAAGGGAAAGAATTTCTGTAATTGCCAACCCACTTTGTAGAAGAGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp CTATGCCAGAAAAGTACTTTCTTCACAGGAGGTGTTGAAATAATGCCGGATAAACAAAGGCATCATGGATaGCCCTTTGCACCAAGAATT +
Preference number: 4 (lower is better)
Translates to: LCQKSTFFTGGVEIMPDKQRHHG*PFAPRI
Trigger: AATTCTTGGTGCAAAGGGGCATCCATGATGCCTTTG...TTTATCCGGCATTATTTCAACACCTCCTGTGAAGAAAGTACTTTTCTGGCATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp CCATCCTACCAAGCTGCTTCTGCTATTCTTTGCTTTACACTTCAGCTCATTTACCCGCCTAATTGGATTTaGATCTGTTTAAGATTACGG +
Preference number: 4 (lower is better)
Translates to: PSYQAASAILCFTLQLIYPPNWI*ICLRLR
Trigger: CCGTAATCTTAAACAGATGCAAATCCAATTAGGCGG...GTAAATGAGCTGAAGTGTAAAGCAAAGAATAGCAGAAGCAGCTTGGTAGGATGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp CTATGCCAGAAAAGTACTTTCTTCACAGGAGGTGTTGAAATAATGCCGGATAAAGCACGTGGCACATATTaGTCCCTAGTTACATTAAGG +
Preference number: 4 (lower is better)
Translates to: LCQKSTFFTGGVEIMPDKARGTY*SLVTLR
Trigger: CCTTAATGTAACTAGGGACCAATATGTGCCACGTGC...TTTATCCGGCATTATTTCAACACCTCCTGTGAAGAAAGTACTTTTCTGGCATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp GTGCTATTTATTGTCTTTGAAAGAGGGTTCACTCAAACCTCTGCCGCAACACCTAAATTCTTTCCCTTTTaGGTTGACTGTGGTGAAAGT +
Preference number: 4 (lower is better)
Translates to: VLFIVFERGFTQTSAATPKFFPF*VDCGES
Trigger: ACTTTCACCACAGTCAACCCAAAAGGGAAAGAATTT...AGGTGTTGCGGCAGAGGTTTGAGTGAACCCTCTTTCAAAGACAATAAATAGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp TCTGCCAAGAAAGCAGTCCCAGACAATACCATAAATGAATGGGTGTGGCTATGCAATACCATAAATGAATaGGTGTGGCTATGCTCTAAT +
Preference number: 4 (lower is better)
Translates to: SAKKAVPDNTINEWVWLCNTINE*VWLCSN
Trigger: ATTAGAGCATAGCCACACCCATTCATTTATGGTATT...GCATAGCCACACCCATTCATTTATGGTATTGTCTGGGACTGCTTTCTTGGCAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp AATTCAAGGGCTCATGCCTCTTCTACAAAGTGGGTTGGCAATTACAGAAATTCTCTTTGCACCAAGAATTaGTTTGAGCAAACACAAGTC +
Preference number: 4 (lower is better)
Translates to: NSRAHASSTKWVGNYRNSLCTKN*FEQTQV
Trigger: GACTTGTGTTTGCTCAAACCAATTCTTGGTGCAAAG...AGAATTTCTGTAATTGCCAACCCACTTTGTAGAAGAGGCATGAGCCCTTGAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp CATCCTACCAAGCTGCTTCTGCTATTCTTTGCTTTACACTTCAGCTCATTTACTCTTTGCACCAAGAATTaGTTTGAGCAAACACAAGTC +
Preference number: 4 (lower is better)
Translates to: HPTKLLLLFFALHFSSFTLCTKN*FEQTQV
Trigger: GACTTGTGTTTGCTCAAACCAATTCTTGGTGCAAAG...AGTAAATGAGCTGAAGTGTAAAGCAAAGAATAGCAGAAGCAGCTTGGTAGGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp CCATCCTACCAAGCTGCTTCTGCTATTCTTTGCTTTACACTTCAGCTCATTTACAAATTCTTTCCCTTTTaGGTTGACTGTGGTGAAAGT +
Preference number: 4 (lower is better)
Translates to: PSYQAASAILCFTLQLIYKFFPF*VDCGES
Trigger: ACTTTCACCACAGTCAACCCAAAAGGGAAAGAATTT...GTAAATGAGCTGAAGTGTAAAGCAAAGAATAGCAGAAGCAGCTTGGTAGGATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp AAGTTCCTGCTGAGAACTCACGGTAGCTATGCCAGAAAAGTACTTTCTTCACAGAATACCATAAATGAATaGGTGTGGCTATGCTCTAAT +
Preference number: 4 (lower is better)
Translates to: KFLLRTHGSYARKVLSSQNTINE*VWLCSN
Trigger: ATTAGAGCATAGCCACACCCATTCATTTATGGTATT...CTGTGAAGAAAGTACTTTTCTGGCATAGCTACCGTGAGTTCTCAGCAGGAACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR TCA 90 bp AATTCAAGGGCTCATGCCTCTTCTACAAAGTGGGTTGGCAATTACAGAAATTCTCAATTTATGAACCCATaGGCCAAATATGCAAGAAGA +
Preference number: 4 (lower is better)
Translates to: NSRAHASSTKWVGNYRNSQFMNP*AKYARR
Trigger: TCTTCTTGCATATTTGGCTCATGGGTTCATAAATTG...AGAATTTCTGTAATTGCCAACCCACTTTGTAGAAGAGGCATGAGCCCTTGAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp CCATCCTACCAAGCTGCTTCTGCTATTCTTTGCTTTACACTTCAGCTCATTTACAATACCATAAATGAATaGGTGTGGCTATGCTCTAAT +
Preference number: 4 (lower is better)
Translates to: PSYQAASAILCFTLQLIYNTINE*VWLCSN
Trigger: ATTAGAGCATAGCCACACCCATTCATTTATGGTATT...GTAAATGAGCTGAAGTGTAAAGCAAAGAATAGCAGAAGCAGCTTGGTAGGATGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CCA 90 bp TTCTCTTTCTTCCCACAACCAAGGGCCATTTTACTAAACAATAAGCTATTTCCTGAATCCCTGCATAGCTaGAGGAAGTTCAAGGATAAT +
Preference number: 4 (lower is better)
Translates to: FSFFPQPRAILLNNKLFPESLHS*RKFKDN
Trigger: ATTATCCTTGAACTTCCTCCAGCTATGCAGGGATTC...AGGAAATAGCTTATTGTTTAGTAAAATGGCCCTTGGTTGTGGGAAGAAAGAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp TTCTCTTTCTTCCCACAACCAAGGGCCATTTTACTAAACAATAAGCTATTTCCTAGAAGACTCAAAATTTaGCACCCAGCCAAAGAATCT +
Preference number: 4 (lower is better)
Translates to: FSFFPQPRAILLNNKLFPRRLKI*HPAKES
Trigger: AGATTCTTTGGCTGGGTGGCAAATTTTGAGTCTTCT...AGGAAATAGCTTATTGTTTAGTAAAATGGCCCTTGGTTGTGGGAAGAAAGAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR TCA 90 bp TTCTCTTTCTTCCCACAACCAAGGGCCATTTTACTAAACAATAAGCTATTTCCTCAATTTATGAACCCATaGGCCAAATATGCAAGAAGA +
Preference number: 4 (lower is better)
Translates to: FSFFPQPRAILLNNKLFPQFMNP*AKYARR
Trigger: TCTTCTTGCATATTTGGCTCATGGGTTCATAAATTG...AGGAAATAGCTTATTGTTTAGTAAAATGGCCCTTGGTTGTGGGAAGAAAGAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR GCA 90 bp TTCTCTTTCTTCCCACAACCAAGGGCCATTTTACTAAACAATAAGCTATTTCCTTCATTAGATAAAAGGTaGCTGAAATTCAAGGGCTCA +
Preference number: 4 (lower is better)
Translates to: FSFFPQPRAILLNNKLFPSLDKR*LKFKGS
Trigger: TGAGCCCTTGAATTTCAGGCACCTTTTATCTAATGA...AGGAAATAGCTTATTGTTTAGTAAAATGGCCCTTGGTTGTGGGAAGAAAGAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS GCA 90 bp AGGTGGCGGCGGCCGGGAGCCAGCGGCCGCCCACGAAGCTGTCGGTaGGCAGCAGCGCCGCAGAGAGGCCCGCCAGGCGCCCAGCGTAGC +
Preference number: 5 (lower is better)
Translates to: RWRRPGASGRPRSCR*AAAPQRGPPGAQRS
Trigger: GCTACGCTGGGCGCCTGGCGGGCCTCTCTGCGGCGCTGCTGCGCACCGACAGCTTCGTGGGCGGCCGCTGGCTCCCGGCCGCCGCCACCT
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000491546.5
ENST00000672652.1
CDS GCA 90 bp CCGCAGTCGGCTACCATGCCCAGAGCGGCGCCGCTGGCCGGGTCTTaGACGGGGAAGGTGGCGGCGGCCGGGAGCCAGCGGCCGCCCACG +
Preference number: 5 (lower is better)
Translates to: PQSATMPRAAPLAGS*TGKVAAAGSQRPPT
Trigger: CGTGGGCGGCCGCTGGCTCCCGGCCGCCGCCACCTTCCCCGTGCAAGACCCGGCCAGCGGCGCCGCTCTGGGCATGGTAGCCGACTGCGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000491546.5
ENST00000672652.1
CDS CCA 90 bp CCATGCCCAGAGCGGCGCCGCTGGCCGGGTCTTGCACGGGGAAGGTaGCGGCGGCCGGGAGCCAGCGGCCGCCCACGAAGCTGTCGGTGC +
Preference number: 5 (lower is better)
Translates to: PCPERRRWPGLARGR*RRPGASGRPRSCRC
Trigger: GCACCGACAGCTTCGTGGGCGGCCGCTGGCTCCCGGCCGCCGCCACCTTCCCCGTGCAAGACCCGGCCAGCGGCGCCGCTCTGGGCATGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000491546.5
ENST00000672652.1
CDS CCA 90 bp CCTCTCGCACCCCGCAGTCGGCTACCATGCCCAGAGCGGCGCCGCTaGCCGGGTCTTGCACGGGGAAGGTGGCGGCGGCCGGGAGCCAGC +
Preference number: 5 (lower is better)
Translates to: PLAPRSRLPCPERRR*PGLARGRWRRPGAS
Trigger: GCTGGCTCCCGGCCGCCGCCACCTTCCCCGTGCAAGACCCGGCCAGCGGCGCCGCTCTGGGCATGGTAGCCGACTGCGGGGTGCGAGAGG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000491546.5
ENST00000672652.1
CDS CCA 90 bp CGAGGCGCCGGGCCCCACAGCTCCGCAGCCAAATGCAGGTCGCCATaGCCCGGGCAACGACGGCGACAGGAAACAGGCAAGCGGGCGCGC +
Preference number: 5 (lower is better)
Translates to: RGAGPHSSAAKCRSP*PGQRRRQETGKRAR
Trigger: GCGCGCCCGCTTGCCTGTTTCCTGTCGCCGTCGTTGCCCGGGCCATGGCGACCTGCATTTGGCTGCGGAGCTGTGGGGCCCGGCGCCTCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491546.5
CDS GCA 90 bp GAAACGTCGACCCGAGGCGCCGGGCCCCACAGCTCCGCAGCCAAATaGAGGTCGCCATGGCCCGGGCAACGACGGCGACAGGAAACAGGC +
Preference number: 5 (lower is better)
Translates to: ETSTRGAGPHSSAAK*RSPWPGQRRRQETG
Trigger: GCCTGTTTCCTGTCGCCGTCGTTGCCCGGGCCATGGCGACCTGCATTTGGCTGCGGAGCTGTGGGGCCCGGCGCCTCGGGTCGACGTTTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491546.5
CDS-3UTR CAA 90 bp AGGGCGTGTCTTCGGCAGGCTTCACCACGACAGTACAGCCGGCTGCCAGGGCGGGAATCCCAGCCTGGCTaGCAAGCTCAGCCAGGGCCA +
Preference number: 5 (lower is better)
Translates to: RACLRQASPRQYSRLPGRESQPG*QAQPGP
Trigger: TGGCCCTGGCTGAGCTTGCAAGCCAGGCTGGGATTC...CCGCCCTGGCAGCCGGCTGTACTGTCGTGGTGAAGCCTGCCGAAGACACGCCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672557.1
CDS-3UTR CAA 90 bp TCTGGGCCCATGTTCTGTAGCGACATGGGGGATGGTTGTGCCACTGCCCAGGCAACGCCTATGGGCTGCTaGAGGACCAGGGCCCGCCTG +
Preference number: 5 (lower is better)
Translates to: SGPMFCSDMGDGCATAQATPMGC*RTRARL
Trigger: CAGGCGGGCCCTGGTCCTCAAGCAGCCCATAGGCGT...TGCCTGGGCAGTGGCACAACCATCCCCCATGTCGCTACAGAACATGGGCCCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CAA 90 bp GCTCTGGGCCCATGTTCTGTAGCGACATGGGGGATGGTTGTGCCACTGCCCAGGCGACATGGGGGATGGTaGTGCCACTGCCCAGGCAGT +
Preference number: 5 (lower is better)
Translates to: ALGPCSVATWGMVVPLPRRHGGW*CHCPGS
Trigger: ACTGCCTGGGCAGTGGCACAACCATCCCCCATGTCG...CCTGGGCAGTGGCACAACCATCCCCCATGTCGCTACAGAACATGGGCCCAGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CAA 90 bp TCTGGGCCCATGTTCTGTAGCGACATGGGGGATGGTTGTGCCACTGCCCAGGCACGACATGGGGGATGGTaGTGCCACTGCCCAGGCAGT +
Preference number: 5 (lower is better)
Translates to: SGPMFCSDMGDGCATAQARHGGW*CHCPGS
Trigger: ACTGCCTGGGCAGTGGCACAACCATCCCCCATGTCG...TGCCTGGGCAGTGGCACAACCATCCCCCATGTCGCTACAGAACATGGGCCCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CAA 90 bp GCTCTGGGCCCATGTTCTGTAGCGACATGGGGGATGGTTGTGCCACTGCCCAGGAATGAACTCCTCTCCTaGGCGGAGACCTCCCTCCAG +
Preference number: 5 (lower is better)
Translates to: ALGPCSVATWGMVVPLPRNELLS*AETSLQ
Trigger: CTGGAGGGAGGTCTCCGCCAAGGAGAGGAGTTCATT...CCTGGGCAGTGGCACAACCATCCCCCATGTCGCTACAGAACATGGGCCCAGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CAA 90 bp TTGGCAAAGCCACTGACAGTAGGCAAGGAAGGGCTGGGCGGTGCTGCTCGTAACCGACATGGGGGATGGTaGTGCCACTGCCCAGGCAGT +
Preference number: 5 (lower is better)
Translates to: LAKPLTVGKEGLGGAARNRHGGW*CHCPGS
Trigger: ACTGCCTGGGCAGTGGCACAACCATCCCCCATGTCG...GTTACGAGCAGCACCGCCCAGCCCTTCCTTGCCTACTGTCAGTGGCTTTGCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS GCA 90 bp TGGAGCAAGGCCGCCCAGCTCCATAGAGACCCTTTTCACAGAGTTTaGTGCGTGGTGCAACAGGATCTCAGCCAGGGCCAGGGCGGAGAA +
Preference number: 5 (lower is better)
Translates to: WSKAAQLHRDPFHRV*CVVQQDLSQGQGGE
Trigger: TTCTCCGCCCTGGCCCTGGCTGAGATCCTGTTGCACCACGCAGCAAACTCTGTGAAAAGGGTCTCTATGGAGCTGGGCGGCCTTGCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672352.1
CDS-3UTR CAA 90 bp AGGTGCTCTGGGCCCATGTTCTGTAGCGACATGGGGGATGGTTGTGCCACTGCCAATGAACTCCTCTCCTaGGCGGAGACCTCCCTCCAG +
Preference number: 5 (lower is better)
Translates to: RCSGPMFCSDMGDGCATANELLS*AETSLQ
Trigger: CTGGAGGGAGGTCTCCGCCAAGGAGAGGAGTTCATT...GGCAGTGGCACAACCATCCCCCATGTCGCTACAGAACATGGGCCCAGAGCACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CAA 90 bp ACCTTGGGAATGTGGCTAGTACACTCCAGGCCAGATGCTAGGCAGCTCCCTGTGCGTGATCTGCCTGCCTaGGCCTCCCAAGGTGTTGGG +
Preference number: 5 (lower is better)
Translates to: TLGMWLVHSRPDARQLPVRDLPA*ASQGVG
Trigger: CCCAACACCTTGGGAGGCCAAGGCAGGCAGATCACG...CACAGGGAGCTGCCTAGCATCTGGCCTGGAGTGTACTAGCCACATTCCCAAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CAA 90 bp GTGATTCTTGACAGGGCCGGGGCACTGTCACTAGGAGATGAATTTCAGCTCTTCACGCCTATGGGCTGCTaGAGGACCAGGGCCCGCCTG +
Preference number: 5 (lower is better)
Translates to: VILDRAGALSLGDEFQLFTPMGC*RTRARL
Trigger: CAGGCGGGCCCTGGTCCTCAAGCAGCCCATAGGCGT...GAAGAGCTGAAATTCATCTCCTAGTGACAGTGCCCCGGCCCTGTCAAGAATCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CAA 90 bp TTGTGCCACTGCCCAGGCAGTGATCAAGCCTTTGTGACGGCCCATGGGGCTGGGCCCTTTTCACAGAGTTaGCTGCGTGGTGCAACAGGA +
Preference number: 5 (lower is better)
Translates to: LCHCPGSDQAFVTAHGAGPFSQS*LRGATG
Trigger: TCCTGTTGCACCACGCAGCAAACTCTGTGAAAAGGG...CCCAGCCCCATGGGCCGTCACAAAGGCTTGATCACTGCCTGGGCAGTGGCACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CAA 90 bp CCGGGTGATCATGGCACTGGGGAAATTCCACGGGGTGATGACTGCAGCCACGCCCCCTTTTCACAGAGTTaGCTGCGTGGTGCAACAGGA +
Preference number: 5 (lower is better)
Translates to: PGDHGTGEIPRGDDCSHAPFSQS*LRGATG
Trigger: TCCTGTTGCACCACGCAGCAAACTCTGTGAAAAGGG...GGCGTGGCTGCAGTCATCACCCCGTGGAATTTCCCCAGTGCCATGATCACCCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000672557.1
CDS-3UTR CAA 90 bp TTGTGCCACTGCCCAGGCAGTGATCAAGCCTTTGTGACGGCCCATGGGGCTGGGCTTCTCCTTGGGACCTaGGGAATGTGGCTAGTACAC +
Preference number: 5 (lower is better)
Translates to: LCHCPGSDQAFVTAHGAGLLLGT*GMWLVH
Trigger: GTGTACTAGCCACATTCCCAAGGTCCCAAGGAGAAG...CCCAGCCCCATGGGCCGTCACAAAGGCTTGATCACTGCCTGGGCAGTGGCACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CAA 90 bp AGGTGCTCTGGGCCCATGTTCTGTAGCGACATGGGGGATGGTTGTGCCACTGCCCCCTTTTCACAGAGTTaGCTGCGTGGTGCAACAGGA +
Preference number: 5 (lower is better)
Translates to: RCSGPMFCSDMGDGCATAPFSQS*LRGATG
Trigger: TCCTGTTGCACCACGCAGCAAACTCTGTGAAAAGGG...GGCAGTGGCACAACCATCCCCCATGTCGCTACAGAACATGGGCCCAGAGCACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CAA 90 bp TTGTGCCACTGCCCAGGCAGTGATCAAGCCTTTGTGACGGCCCATGGGGCTGGGTCCTCTGTATCGAACTaGATAACTGGTGCCAGAGGC +
Preference number: 5 (lower is better)
Translates to: LCHCPGSDQAFVTAHGAGSSVSN*ITGARG
Trigger: GCCTCTGGCACCAGTTATCAAGTTCGATACAGAGGA...CCCAGCCCCATGGGCCGTCACAAAGGCTTGATCACTGCCTGGGCAGTGGCACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CAA 90 bp GAGCCAGGGCCTCATTCTGTAAACCCAGTGCTGGTTCTCTGGGAGTCTGCAGCCGCCTCCCCTACTTCCTaGGCATTCTTTCGAGAACAG +
Preference number: 5 (lower is better)
Translates to: EPGPHSVNPVLVLWESAAASPTS*AFFREQ
Trigger: CTGTTCTCGAAAGAATGCCAAGGAAGTAGGGGAGGC...GGCTGCAGACTCCCAGAGAACCAGCACTGGGTTTACAGAATGAGGCCCTGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672652.1
CDS-3UTR CAA 90 bp TGGGGAGCCAGGGCCTCATTCTGTAAACCCAGTGCTGGTTCTCTGGGAGTCTGCCTTCTCCTTGGGACCTaGGGAATGTGGCTAGTACAC +
Preference number: 5 (lower is better)
Translates to: WGARASFCKPSAGSLGVCLLLGT*GMWLVH
Trigger: GTGTACTAGCCACATTCCCAAGGTCCCAAGGAGAAG...GCAGACTCCCAGAGAACCAGCACTGGGTTTACAGAATGAGGCCCTGGCTCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CAA 90 bp GCTCTGGGCCCATGTTCTGTAGCGACATGGGGGATGGTTGTGCCACTGCCCAGGGAATCCCAGCCTGGCTaGCAAGCTATAAAGAGAAAC +
Preference number: 5 (lower is better)
Translates to: ALGPCSVATWGMVVPLPRESQPG*QAIKRN
Trigger: GTTTCTCTTTATAGCTTGCAAGCCAGGCTGGGATTC...CCTGGGCAGTGGCACAACCATCCCCCATGTCGCTACAGAACATGGGCCCAGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672652.1
CDS-3UTR CAA 90 bp TCAAACCTCTGCCGCAACACCTCCAGATGCACATTCGGTGTCTTCTGTGCTGAGAATGAACTCCTCTCCTaGGCGGAGACCTCCCTCCAG +
Preference number: 5 (lower is better)
Translates to: SNLCRNTSRCTFGVFCAENELLS*AETSLQ
Trigger: CTGGAGGGAGGTCTCCGCCAAGGAGAGGAGTTCATT...CTCAGCACAGAAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGAGGTTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CAA 90 bp TTATTGTCTTTGAAAGAGGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGACGCCTATGGGCTGCTaGAGGACCAGGGCCCGCCTG +
Preference number: 5 (lower is better)
Translates to: LLSLKEGSLKPLPQHLQMTPMGC*RTRARL
Trigger: CAGGCGGGCCCTGGTCCTCAAGCAGCCCATAGGCGT...CATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCCTCTTTCAAAGACAATAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CAA 90 bp CAGAGAACCACTCTAGGAAAAAGGCGGAATAGAGAATTTCTCCATGTGCCTCCTACGCCTATGGGCTGCTaGAGGACCAGGGCCCGCCTG +
Preference number: 5 (lower is better)
Translates to: QRTTLGKRRNREFLHVPPTPMGC*RTRARL
Trigger: CAGGCGGGCCCTGGTCCTCAAGCAGCCCATAGGCGT...AGGAGGCACATGGAGAAATTCTCTATTCCGCCTTTTTCCTAGAGTGGTTCTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672557.1
CDS-3UTR CAA 90 bp GCTCTGGGCCCATGTTCTGTAGCGACATGGGGGATGGTTGTGCCACTGCCCAGGGCACCAAGAATTGGTTaGAGCAAACACAAGTCTGTC +
Preference number: 5 (lower is better)
Translates to: ALGPCSVATWGMVVPLPRAPRIG*SKHKSV
Trigger: GACAGACTTGTGTTTGCTCAAACCAATTCTTGGTGC...CCTGGGCAGTGGCACAACCATCCCCCATGTCGCTACAGAACATGGGCCCAGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CAA 90 bp TTGGCAAAGCCACTGACAGTAGGCAAGGAAGGGCTGGGCGGTGCTGCTCGTAACTCCTCTGTATCGAACTaGATAACTGGTGCCAGAGGC +
Preference number: 5 (lower is better)
Translates to: LAKPLTVGKEGLGGAARNSSVSN*ITGARG
Trigger: GCCTCTGGCACCAGTTATCAAGTTCGATACAGAGGA...GTTACGAGCAGCACCGCCCAGCCCTTCCTTGCCTACTGTCAGTGGCTTTGCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS TCA 90 bp GCCTGGCTTGCAAGCAACAATGGATCCAAATCAAGAAGAAATCCCTaGTTTACCTCAGCCAGGGCCAGGGCGGAGAAGGGCGTGTCTTCG +
Preference number: 5 (lower is better)
Translates to: AWLASNNGSKSRRNP*FTSARARAEKGVSS
Trigger: CGAAGACACGCCCTTCTCCGCCCTGGCCCTGGCTGAGGTAAATCAGGGATTTCTTCTTGATTTGGATCCATTGTTGCTTGCAAGCCAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348925.2
CDS-3UTR CAA 90 bp CGCAACACCTCCAGATGCACATTCGGTGTCTTCTGTGCTGAGCTGGCAGATGCCGAGGATCAGTACAAATaGCCTCCCCTACTTCCTTGG +
Preference number: 5 (lower is better)
Translates to: RNTSRCTFGVFCAELADAEDQYK*PPLLPW
Trigger: CCAAGGAAGTAGGGGAGGCAATTTGTACTGATCCTC...GGCATCTGCCAGCTCAGCACAGAAGACACCGAATGTGCATCTGGAGGTGTTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672652.1
CDS-3UTR CAA 90 bp CAAGGTGCTCTGGGCCCATGTTCTGTAGCGACATGGGGGATGGTTGTGCCACTGACAGCCTGGTCCACGTaGGCACTGTCAAATACTATA +
Preference number: 5 (lower is better)
Translates to: QGALGPCSVATWGMVVPLTAWST*ALSNTI
Trigger: TATAGTATTTGACAGTGCCAACGTGGACCAGGCTGT...CAGTGGCACAACCATCCCCCATGTCGCTACAGAACATGGGCCCAGAGCACCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CAA 90 bp TTGGCAAAGCCACTGACAGTAGGCAAGGAAGGGCTGGGCGGTGCTGCTCGTAACACAGCCTGGTCCACGTaGGCACTGTCAAATACTATA +
Preference number: 5 (lower is better)
Translates to: LAKPLTVGKEGLGGAARNTAWST*ALSNTI
Trigger: TATAGTATTTGACAGTGCCAACGTGGACCAGGCTGT...GTTACGAGCAGCACCGCCCAGCCCTTCCTTGCCTACTGTCAGTGGCTTTGCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CAA 90 bp TCTGCCGCAACACCTCCAGATGCACATTCGGTGTCTTCTGTGCTGAGCTGGCAGTCCTCTGTATCGAACTaGATAACTGGTGCCAGAGGC +
Preference number: 5 (lower is better)
Translates to: SAATPPDAHSVSSVLSWQSSVSN*ITGARG
Trigger: GCCTCTGGCACCAGTTATCAAGTTCGATACAGAGGA...CTGCCAGCTCAGCACAGAAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CAA 90 bp CAAGGTGCTCTGGGCCCATGTTCTGTAGCGACATGGGGGATGGTTGTGCCACTGGAAATTAATCCTTCGTaGACGCCAACCATGCCCACT +
Preference number: 5 (lower is better)
Translates to: QGALGPCSVATWGMVVPLEINPS*TPTMPT
Trigger: AGTGGGCATGGTTGGCGTCAACGAAGGATTAATTTC...CAGTGGCACAACCATCCCCCATGTCGCTACAGAACATGGGCCCAGAGCACCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CAA 90 bp GAGGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGCACATTCGGTGTCTTTCATCAATGCCATACTaGGACCCCTCTCGCCCAAGG +
Preference number: 5 (lower is better)
Translates to: EGSLKPLPQHLQMHIRCLSSMPY*DPSRPR
Trigger: CCTTGGGCGAGAGGGGTCCAAGTATGGCATTGATGA...AAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CAA 90 bp GGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGCACATTCGGTGTCTTCTTCATCAATGCCATACTaGGACCCCTCTCGCCCAAGG +
Preference number: 5 (lower is better)
Translates to: GFTQTSAATPPDAHSVSSSSMPY*DPSRPR
Trigger: CCTTGGGCGAGAGGGGTCCAAGTATGGCATTGATGA...AGAAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CAA 90 bp ATCGCTGGGAAGTTCCTGCTGAGAACTCACGGTAGCTATGCCAGAAAAGTACTTCGTGATCTGCCTGCCTaGGCCTCCCAAGGTGTTGGG +
Preference number: 5 (lower is better)
Translates to: IAGKFLLRTHGSYARKVLRDLPA*ASQGVG
Trigger: CCCAACACCTTGGGAGGCCAAGGCAGGCAGATCACG...AAGTACTTTTCTGGCATAGCTACCGTGAGTTCTCAGCAGGAACTTCCCAGCGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CAA 90 bp TTCACTCAAACCTCTGCCGCAACACCTCCAGATGCACATTCGGTGTCTTCTGTGATGTCCTGGGTGACATaGCACAGCAGGGTAGGCTCA +
Preference number: 5 (lower is better)
Translates to: FTQTSAATPPDAHSVSSVMSWVT*HSRVGS
Trigger: TGAGCCTACCCTGCTGTGCAATGTCACCCAGGACAT...CACAGAAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CAA 90 bp CGCAACACCTCCAGATGCACATTCGGTGTCTTCTGTGCTGAGCTGGCAGATGCCGGCACGTGGCACATATaGGTCCCTAGTTACATTAAG +
Preference number: 5 (lower is better)
Translates to: RNTSRCTFGVFCAELADAGTWHI*VPSYIK
Trigger: CTTAATGTAACTAGGGACCAATATGTGCCACGTGCC...GGCATCTGCCAGCTCAGCACAGAAGACACCGAATGTGCATCTGGAGGTGTTGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CAA 90 bp AGGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGCACATTCGGTGTCTTCGAATCCCAGCCTGGCTaGCAAGCAACAATGGATCCA +
Preference number: 5 (lower is better)
Translates to: RVHSNLCRNTSRCTFGVFESQPG*QATMDP
Trigger: TGGATCCATTGTTGCTTGCAAGCCAGGCTGGGATTC...GAAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348925.2
CDS TCA 90 bp AAAAACAAACCCACACAGTCTGTCAGAAGCTGCAGACCTGACCAGTaGACGTGTGGCTGCTACCGCCTCTCTGTGAAAACACTTCCCTCG +
Preference number: 5 (lower is better)
Translates to: KNKPTQSVRSCRPDQ*TCGCYRLSVKTLPS
Trigger: CGAGGGAAGTGTTTTCACAGAGAGGCGGTAGCAGCCACACGTTCACTGGTCAGGTCTGCAGCTTCTGACAGACTGTGTGGGTTTGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479394.2
CDS-3UTR CAA 90 bp TGCCTCTTCTACAAAGTGGGTTGGCAATTACAGAAATTCTTTCCCTTTTGGGTTACGCCTATGGGCTGCTaGAGGACCAGGGCCCGCCTG +
Preference number: 5 (lower is better)
Translates to: CLFYKVGWQLQKFFPFWVTPMGC*RTRARL
Trigger: CAGGCGGGCCCTGGTCCTCAAGCAGCCCATAGGCGT...AACCCAAAAGGGAAAGAATTTCTGTAATTGCCAACCCACTTTGTAGAAGAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CAA 90 bp TTCCTTCCACAACCCAGAATAACCACAAGATGTAAGTGGAGTCTACACAGACAGGAATCCCAGCCTGGCTaGCAAGCTCAGCCAGGGCCA +
Preference number: 5 (lower is better)
Translates to: FLPQPRITTRCKWSLHRQESQPG*QAQPGP
Trigger: TGGCCCTGGCTGAGCTTGCAAGCCAGGCTGGGATTC...CTGTCTGTGTAGACTCCACTTACATCTTGTGGTTATTCTGGGTTGTGGAAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357578.8
CDS-3UTR CAA 90 bp TTCCTTCCACAACCCAGAATAACCACAAGATGTAAGTGGAGTCTACACAGACAGCGACATGGGGGATGGTaGTGCCACTGCCCAGGCAGT +
Preference number: 5 (lower is better)
Translates to: FLPQPRITTRCKWSLHRQRHGGW*CHCPGS
Trigger: ACTGCCTGGGCAGTGGCACAACCATCCCCCATGTCG...CTGTCTGTGTAGACTCCACTTACATCTTGTGGTTATTCTGGGTTGTGGAAGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CAA 90 bp AGGTGCTCTGGGCCCATGTTCTGTAGCGACATGGGGGATGGTTGTGCCACTGCCTGCTTCTGCTATTCTTaGCTTTACACTTCAGCTCAT +
Preference number: 5 (lower is better)
Translates to: RCSGPMFCSDMGDGCATACFCYS*LYTSAH
Trigger: ATGAGCTGAAGTGTAAAGCAAAGAATAGCAGAAGCA...GGCAGTGGCACAACCATCCCCCATGTCGCTACAGAACATGGGCCCAGAGCACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CAA 90 bp TTGGCAAAGCCACTGACAGTAGGCAAGGAAGGGCTGGGCGGTGCTGCTCGTAACTCTTTCCCTTTTGGGTaGACTGTGGTGAAAGTACTT +
Preference number: 5 (lower is better)
Translates to: LAKPLTVGKEGLGGAARNSFPFG*TVVKVL
Trigger: AAGTACTTTCACCACAGTCAACCCAAAAGGGAAAGA...GTTACGAGCAGCACCGCCCAGCCCTTCCTTGCCTACTGTCAGTGGCTTTGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CAA 90 bp TTGGCAAAGCCACTGACAGTAGGCAAGGAAGGGCTGGGCGGTGCTGCTCGTAACAAGAAGACTCAAAATTaGCCACCCAGCCAAAGAATC +
Preference number: 5 (lower is better)
Translates to: LAKPLTVGKEGLGGAARNKKTQN*PPSQRI
Trigger: GATTCTTTGGCTGGGTGGCAAATTTTGAGTCTTCTT...GTTACGAGCAGCACCGCCCAGCCCTTCCTTGCCTACTGTCAGTGGCTTTGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CAA 90 bp GTGATTCTTGACAGGGCCGGGGCACTGTCACTAGGAGATGAATTTCAGCTCTTCGAGGATCAGTACAAATaGCCTCCCCTACTTCCTTGG +
Preference number: 5 (lower is better)
Translates to: VILDRAGALSLGDEFQLFEDQYK*PPLLPW
Trigger: CCAAGGAAGTAGGGGAGGCAATTTGTACTGATCCTC...GAAGAGCTGAAATTCATCTCCTAGTGACAGTGCCCCGGCCCTGTCAAGAATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357578.8
ENST00000672652.1
CDS-3UTR CAA 90 bp AGGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGCACATTCGGTGTCTTCACAGCCTGGTCCACGTaGGCACTGTCAAATACTATA +
Preference number: 5 (lower is better)
Translates to: RVHSNLCRNTSRCTFGVFTAWST*ALSNTI
Trigger: TATAGTATTTGACAGTGCCAACGTGGACCAGGCTGT...GAAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CAA 90 bp ATTGTCTTTGAAAGAGGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGCATCATCAATGCCATACTaGGACCCCTCTCGCCCAAGG +
Preference number: 5 (lower is better)
Translates to: IVFERGFTQTSAATPPDASSMPY*DPSRPR
Trigger: CCTTGGGCGAGAGGGGTCCAAGTATGGCATTGATGA...TGCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCCTCTTTCAAAGACAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CAA 90 bp TTGGCAAAGCCACTGACAGTAGGCAAGGAAGGGCTGGGCGGTGCTGCTCGTAACTGCTTCTGCTATTCTTaGCTTTACACTTCAGCTCAT +
Preference number: 5 (lower is better)
Translates to: LAKPLTVGKEGLGGAARNCFCYS*LYTSAH
Trigger: ATGAGCTGAAGTGTAAAGCAAAGAATAGCAGAAGCA...GTTACGAGCAGCACCGCCCAGCCCTTCCTTGCCTACTGTCAGTGGCTTTGCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CAA 90 bp GGATGGTTGTGCCACTGCCCAGGCAGTGATCAAGCCTTTGTGACGGCCCATGGGCTTCTACAAAGTGGGTaGGCAATTACAGAAATTCTT +
Preference number: 5 (lower is better)
Translates to: GWLCHCPGSDQAFVTAHGLLQSG*AITEIL
Trigger: AAGAATTTCTGTAATTGCCAACCCACTTTGTAGAAG...CCCATGGGCCGTCACAAAGGCTTGATCACTGCCTGGGCAGTGGCACAACCATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CAA 90 bp AGTACAAATTGCCTCCCCTACTTCCTTGGCATTCTTTCGAGAACAGGGAATAACAATGAACTCCTCTCCTaGGCGGAGACCTCCCTCCAG +
Preference number: 5 (lower is better)
Translates to: STNCLPYFLGILSRTGNNNELLS*AETSLQ
Trigger: CTGGAGGGAGGTCTCCGCCAAGGAGAGGAGTTCATT...GTTATTCCCTGTTCTCGAAAGAATGCCAAGGAAGTAGGGGAGGCAATTTGTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672557.1
ENST00000672652.1
CDS-3UTR CAA 90 bp GGAATAACATTGTATACACCTGAAGGAATCCCAGCCTGGCTTGCAAGCTCAGCCGAGGATCAGTACAAATaGCCTCCCCTACTTCCTTGG +
Preference number: 5 (lower is better)
Translates to: GITLYTPEGIPAWLASSAEDQYK*PPLLPW
Trigger: CCAAGGAAGTAGGGGAGGCAATTTGTACTGATCCTC...GGCTGAGCTTGCAAGCCAGGCTGGGATTCCTTCAGGTGTATACAATGTTATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672557.1
CDS-3UTR CAA 90 bp TGGCACATATTGGTCCCTAGTTACATTAAGGGCAGGGGTAGGATTTGCATCTGTATGTCCTGGGTGACATaGCACAGCAGGGTAGGCTCA +
Preference number: 5 (lower is better)
Translates to: WHILVPSYIKGRGRICICMSWVT*HSRVGS
Trigger: TGAGCCTACCCTGCTGTGCAATGTCACCCAGGACAT...ACAGATGCAAATCCTACCCCTGCCCTTAATGTAACTAGGGACCAATATGTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CAA 90 bp TTCACTCAAACCTCTGCCGCAACACCTCCAGATGCACATTCGGTGTCTTCTGTGGAAATTAATCCTTCGTaGACGCCAACCATGCCCACT +
Preference number: 5 (lower is better)
Translates to: FTQTSAATPPDAHSVSSVEINPS*TPTMPT
Trigger: AGTGGGCATGGTTGGCGTCAACGAAGGATTAATTTC...CACAGAAGACACCGAATGTGCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CAA 90 bp TTATTGTCTTTGAAAGAGGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGTCATCAATGCCATACTaGGACCCCTCTCGCCCAAGG +
Preference number: 5 (lower is better)
Translates to: LLSLKEGSLKPLPQHLQMSSMPY*DPSRPR
Trigger: CCTTGGGCGAGAGGGGTCCAAGTATGGCATTGATGA...CATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCCTCTTTCAAAGACAATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CAA 90 bp ACCTTGGGAATGTGGCTAGTACACTCCAGGCCAGATGCTAGGCAGCTCCCTGTGTGCTTCTGCTATTCTTaGCTTTACACTTCAGCTCAT +
Preference number: 5 (lower is better)
Translates to: TLGMWLVHSRPDARQLPVCFCYS*LYTSAH
Trigger: ATGAGCTGAAGTGTAAAGCAAAGAATAGCAGAAGCA...CACAGGGAGCTGCCTAGCATCTGGCCTGGAGTGTACTAGCCACATTCCCAAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CAA 90 bp CATCCTACCAAGCTGCTTCTGCTATTCTTTGCTTTACACTTCAGCTCATTTACTCGTGATCTGCCTGCCTaGGCCTCCCAAGGTGTTGGG +
Preference number: 5 (lower is better)
Translates to: HPTKLLLLFFALHFSSFTRDLPA*ASQGVG
Trigger: CCCAACACCTTGGGAGGCCAAGGCAGGCAGATCACG...AGTAAATGAGCTGAAGTGTAAAGCAAAGAATAGCAGAAGCAGCTTGGTAGGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS CCA 90 bp GACATCCATTTCCTCCTGTTGTCAGACACCAGACATTGTCATTCCTaGTACTCAGGACTTTGGACCCAGTCTGGAACTCAGACTGGACAT +
Preference number: 5 (lower is better)
Translates to: DIHFLLLSDTRHCHS*YSGLWTQSGTQTGH
Trigger: ATGTCCAGTCTGAGTTCCAGACTGGGTCCAAAGTCCTGAGTACCAGGAATGACAATGTCTGGTGTCTGACAACAGGAGGAAATGGATGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675422.1
CDS-3UTR CAA 90 bp GGGCTTCCTCAGAGAACCACTCTAGGAAAAAGGCGGAATAGAGAATTTCTCCATGCCTCCCCTACTTCCTaGGCATTCTTTCGAGAACAG +
Preference number: 5 (lower is better)
Translates to: GLPQRTTLGKRRNREFLHASPTS*AFFREQ
Trigger: CTGTTCTCGAAAGAATGCCAAGGAAGTAGGGGAGGC...ATGGAGAAATTCTCTATTCCGCCTTTTTCCTAGAGTGGTTCTCTGAGGAAGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672557.1
CDS-3UTR CAA 90 bp TGGCACATATTGGTCCCTAGTTACATTAAGGGCAGGGGTAGGATTTGCATCTGTCCCTTTTCACAGAGTTaGCTGCGTGGTGCAACAGGA +
Preference number: 5 (lower is better)
Translates to: WHILVPSYIKGRGRICICPFSQS*LRGATG
Trigger: TCCTGTTGCACCACGCAGCAAACTCTGTGAAAAGGG...ACAGATGCAAATCCTACCCCTGCCCTTAATGTAACTAGGGACCAATATGTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CAA 90 bp CCACAACCCAGAATAACCACAAGATGTAAGTGGAGTCTACACAGACAGAGATGGCCCTTTTCACAGAGTTaGCTGCGTGGTGCAACAGGA +
Preference number: 5 (lower is better)
Translates to: PQPRITTRCKWSLHRQRWPFSQS*LRGATG
Trigger: TCCTGTTGCACCACGCAGCAAACTCTGTGAAAAGGG...CCATCTCTGTCTGTGTAGACTCCACTTACATCTTGTGGTTATTCTGGGTTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CAA 90 bp AAGTTCCTGCTGAGAACTCACGGTAGCTATGCCAGAAAAGTACTTTCTTCACAGATGTCCTGGGTGACATaGCACAGCAGGGTAGGCTCA +
Preference number: 5 (lower is better)
Translates to: KFLLRTHGSYARKVLSSQMSWVT*HSRVGS
Trigger: TGAGCCTACCCTGCTGTGCAATGTCACCCAGGACAT...CTGTGAAGAAAGTACTTTTCTGGCATAGCTACCGTGAGTTCTCAGCAGGAACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CAA 90 bp CAGGCACGTGGCACATATTGGTCCCTAGTTACATTAAGGGCAGGGGTAGGATTTGGCACGTGGCACATATaGGTCCCTAGTTACATTAAG +
Preference number: 5 (lower is better)
Translates to: QARGTYWSLVTLRAGVGFGTWHI*VPSYIK
Trigger: CTTAATGTAACTAGGGACCAATATGTGCCACGTGCC...AAATCCTACCCCTGCCCTTAATGTAACTAGGGACCAATATGTGCCACGTGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CAA 90 bp TTATTGTCTTTGAAAGAGGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGCTTCTCCTTGGGACCTaGGGAATGTGGCTAGTACAC +
Preference number: 5 (lower is better)
Translates to: LLSLKEGSLKPLPQHLQMLLLGT*GMWLVH
Trigger: GTGTACTAGCCACATTCCCAAGGTCCCAAGGAGAAG...CATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCCTCTTTCAAAGACAATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CAA 90 bp TTTATTGTCTTTGAAAGAGGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGCCTCCCCTACTTCCTaGGCATTCTTTCGAGAACAG +
Preference number: 5 (lower is better)
Translates to: FIVFERGFTQTSAATPPDASPTS*AFFREQ
Trigger: CTGTTCTCGAAAGAATGCCAAGGAAGTAGGGGAGGC...ATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCCTCTTTCAAAGACAATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672652.1
CDS-3UTR CAA 90 bp TCTGCCAAGAAAGCAGTCCCAGACAATACCATAAATGAATGGGTGTGGCTATGCTCCTCTGTATCGAACTaGATAACTGGTGCCAGAGGC +
Preference number: 5 (lower is better)
Translates to: SAKKAVPDNTINEWVWLCSSVSN*ITGARG
Trigger: GCCTCTGGCACCAGTTATCAAGTTCGATACAGAGGA...GCATAGCCACACCCATTCATTTATGGTATTGTCTGGGACTGCTTTCTTGGCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS GCA 90 bp TCTTCTTCATGGCCTCGGCGAATGCTTTTACAAAGGCATCATGGATaGCCCTTTGCACCAAGAATTGGTTTGAGCAAACACAAGTCTGGA +
Preference number: 5 (lower is better)
Translates to: SSSWPRRMLLQRHHG*PFAPRIGLSKHKSG
Trigger: TCCAGACTTGTGTTTGCTCAAACCAATTCTTGGTGCAAAGGGGCATCCATGATGCCTTTGTAAAAGCATTCGCCGAGGCCATGAAGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479394.2
CDS-3UTR CAA 90 bp TCCCCTACTTCCTTGGCATTCTTTCGAGAACAGGGAATAACATTGTATACACCTGCCTCCCCTACTTCCTaGGCATTCTTTCGAGAACAG +
Preference number: 5 (lower is better)
Translates to: SPTSLAFFREQGITLYTPASPTS*AFFREQ
Trigger: CTGTTCTCGAAAGAATGCCAAGGAAGTAGGGGAGGC...AGGTGTATACAATGTTATTCCCTGTTCTCGAAAGAATGCCAAGGAAGTAGGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672557.1
ENST00000672652.1
CDS-3UTR CAA 90 bp ATCGCTGGGAAGTTCCTGCTGAGAACTCACGGTAGCTATGCCAGAAAAGTACTTGCACCAAGAATTGGTTaGAGCAAACACAAGTCTGTC +
Preference number: 5 (lower is better)
Translates to: IAGKFLLRTHGSYARKVLAPRIG*SKHKSV
Trigger: GACAGACTTGTGTTTGCTCAAACCAATTCTTGGTGC...AAGTACTTTTCTGGCATAGCTACCGTGAGTTCTCAGCAGGAACTTCCCAGCGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CAA 90 bp TCTGCCAAGAAAGCAGTCCCAGACAATACCATAAATGAATGGGTGTGGCTATGCGAAATTAATCCTTCGTaGACGCCAACCATGCCCACT +
Preference number: 5 (lower is better)
Translates to: SAKKAVPDNTINEWVWLCEINPS*TPTMPT
Trigger: AGTGGGCATGGTTGGCGTCAACGAAGGATTAATTTC...GCATAGCCACACCCATTCATTTATGGTATTGTCTGGGACTGCTTTCTTGGCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CAA 90 bp TTATTGTCTTTGAAAGAGGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGGAAATTAATCCTTCGTaGACGCCAACCATGCCCACT +
Preference number: 5 (lower is better)
Translates to: LLSLKEGSLKPLPQHLQMEINPS*TPTMPT
Trigger: AGTGGGCATGGTTGGCGTCAACGAAGGATTAATTTC...CATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCCTCTTTCAAAGACAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CAA 90 bp TTCTCTTTCTTCCCACAACCAAGGGCCATTTTACTAAACAATAAGCTATTTCCTAATGAACTCCTCTCCTaGGCGGAGACCTCCCTCCAG +
Preference number: 5 (lower is better)
Translates to: FSFFPQPRAILLNNKLFPNELLS*AETSLQ
Trigger: CTGGAGGGAGGTCTCCGCCAAGGAGAGGAGTTCATT...AGGAAATAGCTTATTGTTTAGTAAAATGGCCCTTGGTTGTGGGAAGAAAGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CAA 90 bp ATTGTCTTTGAAAGAGGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGCATCTTTCCCTTTTGGGTaGACTGTGGTGAAAGTACTT +
Preference number: 5 (lower is better)
Translates to: IVFERGFTQTSAATPPDASFPFG*TVVKVL
Trigger: AAGTACTTTCACCACAGTCAACCCAAAAGGGAAAGA...TGCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCCTCTTTCAAAGACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CAA 90 bp ATTGTCTTTGAAAGAGGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGCAAAGAAGACTCAAAATTaGCCACCCAGCCAAAGAATC +
Preference number: 5 (lower is better)
Translates to: IVFERGFTQTSAATPPDAKKTQN*PPSQRI
Trigger: GATTCTTTGGCTGGGTGGCAAATTTTGAGTCTTCTT...TGCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCCTCTTTCAAAGACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS TCA 90 bp TTCCTTGGCATTCTTTCGAGAACAGGGAATAACATTGTATACACCTaGAGGAATCCCAGCCTGGCTTGCAAGCAACAATGGATCCAAATC +
Preference number: 5 (lower is better)
Translates to: FLGILSRTGNNIVYT*RNPSLACKQQWIQI
Trigger: GATTTGGATCCATTGTTGCTTGCAAGCCAGGCTGGGATTCCTTCAGGTGTATACAATGTTATTCCCTGTTCTCGAAAGAATGCCAAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348925.2
CDS-3UTR CAA 90 bp ACTTCCTTGGCATTCTTTCGAGAACAGGGAATAACATTGTATACACCTGAAGGAGAGGATCAGTACAAATaGCCTCCCCTACTTCCTTGG +
Preference number: 5 (lower is better)
Translates to: TSLAFFREQGITLYTPEGEDQYK*PPLLPW
Trigger: CCAAGGAAGTAGGGGAGGCAATTTGTACTGATCCTC...TCCTTCAGGTGTATACAATGTTATTCCCTGTTCTCGAAAGAATGCCAAGGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672557.1
ENST00000672652.1
CDS-3UTR CAA 90 bp AAGTTCCTGCTGAGAACTCACGGTAGCTATGCCAGAAAAGTACTTTCTTCACAGGCACCAAGAATTGGTTaGAGCAAACACAAGTCTGTC +
Preference number: 5 (lower is better)
Translates to: KFLLRTHGSYARKVLSSQAPRIG*SKHKSV
Trigger: GACAGACTTGTGTTTGCTCAAACCAATTCTTGGTGC...CTGTGAAGAAAGTACTTTTCTGGCATAGCTACCGTGAGTTCTCAGCAGGAACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CAA 90 bp TCTGCCAAGAAAGCAGTCCCAGACAATACCATAAATGAATGGGTGTGGCTATGCAAGAAGACTCAAAATTaGCCACCCAGCCAAAGAATC +
Preference number: 5 (lower is better)
Translates to: SAKKAVPDNTINEWVWLCKKTQN*PPSQRI
Trigger: GATTCTTTGGCTGGGTGGCAAATTTTGAGTCTTCTT...GCATAGCCACACCCATTCATTTATGGTATTGTCTGGGACTGCTTTCTTGGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS TCA 90 bp TGCCTTCAAAAATTCAGGTGGGTATCATCCAATCTGCTGAGAACCTaGAAAGAACAAAGTGGCAGAGGAAGAGCAAATTCACTCTCTGCA +
Preference number: 5 (lower is better)
Translates to: CLQKFRWVSSNLLRT*KEQSGRGRANSLSA
Trigger: TGCAGAGAGTGAATTTGCTCTTCCTCTGCCACTTTGTTCTTTTCAGGTTCTCAGCAGATTGGATGATACCCACCTGAATTTTTGAAGGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675422.1
CDS-3UTR CAA 90 bp CCATCCTACCAAGCTGCTTCTGCTATTCTTTGCTTTACACTTCAGCTCATTTACGCACCAAGAATTGGTTaGAGCAAACACAAGTCTGTC +
Preference number: 5 (lower is better)
Translates to: PSYQAASAILCFTLQLIYAPRIG*SKHKSV
Trigger: GACAGACTTGTGTTTGCTCAAACCAATTCTTGGTGC...GTAAATGAGCTGAAGTGTAAAGCAAAGAATAGCAGAAGCAGCTTGGTAGGATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CAA 90 bp CATCCTACCAAGCTGCTTCTGCTATTCTTTGCTTTACACTTCAGCTCATTTACTGGCACGTGGCACATATaGGTCCCTAGTTACATTAAG +
Preference number: 5 (lower is better)
Translates to: HPTKLLLLFFALHFSSFTGTWHI*VPSYIK
Trigger: CTTAATGTAACTAGGGACCAATATGTGCCACGTGCC...AGTAAATGAGCTGAAGTGTAAAGCAAAGAATAGCAGAAGCAGCTTGGTAGGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CAA 90 bp ATTGTCTTTGAAAGAGGGTTCACTCAAACCTCTGCCGCAACACCTCCAGATGCACTTCTACAAAGTGGGTaGGCAATTACAGAAATTCTT +
Preference number: 5 (lower is better)
Translates to: IVFERGFTQTSAATPPDALLQSG*AITEIL
Trigger: AAGAATTTCTGTAATTGCCAACCCACTTTGTAGAAG...TGCATCTGGAGGTGTTGCGGCAGAGGTTTGAGTGAACCCTCTTTCAAAGACAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS TCA 90 bp TGTAAAAATTCCTGGAGAATTTCTCAGTGCACCAAGCCAGAACCCTaGACTTACACTTTCAGCTGTGATTATTCTGGCAAGGTCATCCTT +
Preference number: 5 (lower is better)
Translates to: CKNSWRISQCTKPEP*TYTFSCDYSGKVIL
Trigger: AAGGATGACCTTGCCAGAATAATCACAGCTGAAAGTGTAAGTTCAGGGTTCTGGCTTGGTGCACTGAGAAATTCTCCAGGAATTTTTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672557.1
CDS TCA 90 bp AGAAGATTTGCCTTCAAAAATTCAGGTGGGTATCATCCAATCTGCTaGGAACCTGAAAAGAACAAAGTGGCAGAGGAAGAGCAAATTCAC +
Preference number: 5 (lower is better)
Translates to: RRFAFKNSGGYHPIC*EPEKNKVAEEEQIH
Trigger: GTGAATTTGCTCTTCCTCTGCCACTTTGTTCTTTTCAGGTTCTCAGCAGATTGGATGATACCCACCTGAATTTTTGAAGGCAAATCTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675422.1
CDS-3UTR CAA 90 bp TTCTCTTTCTTCCCACAACCAAGGGCCATTTTACTAAACAATAAGCTATTTCCTACAGCCTGGTCCACGTaGGCACTGTCAAATACTATA +
Preference number: 5 (lower is better)
Translates to: FSFFPQPRAILLNNKLFPTAWST*ALSNTI
Trigger: TATAGTATTTGACAGTGCCAACGTGGACCAGGCTGT...AGGAAATAGCTTATTGTTTAGTAAAATGGCCCTTGGTTGTGGGAAGAAAGAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS-3UTR CAA 90 bp CTATGCCAGAAAAGTACTTTCTTCACAGGAGGTGTTGAAATAATGCCGGATAAATCTTTCCCTTTTGGGTaGACTGTGGTGAAAGTACTT +
Preference number: 5 (lower is better)
Translates to: LCQKSTFFTGGVEIMPDKSFPFG*TVVKVL
Trigger: AAGTACTTTCACCACAGTCAACCCAAAAGGGAAAGA...TTTATCCGGCATTATTTCAACACCTCCTGTGAAGAAAGTACTTTTCTGGCATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357578.8
ENST00000672352.1
ENST00000672652.1
CDS TCA 90 bp TTCTCAGTGCACCAAGCCAGAACCCTGAACTTACACTTTCAGCTGTaGTTATTCTGGCAAGGTCATCCTTATTTTGTATCATTAAATTGT +
Preference number: 5 (lower is better)
Translates to: FSVHQARTLNLHFQL*LFWQGHPYFVSLNC
Trigger: ACAATTTAATGATACAAAATAAGGATGACCTTGCCAGAATAATCACAGCTGAAAGTGTAAGTTCAGGGTTCTGGCTTGGTGCACTGAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672557.1
CDS CAA 90 bp CCCGCAGTCGGCTACCATGCCCAGAGCGGCGCCGCTGGCCGGGTCTaGCACGGGGAAGGTGGCGGCGGCCGGGAGCCAGCGGCCGCCCAC +
Preference number: 6 (lower is better)
Translates to: PAVGYHAQSGAAGRV*HGEGGGGREPAAAH
Trigger: GTGGGCGGCCGCTGGCTCCCGGCCGCCGCCACCTTCCCCGTGCAAGACCCGGCCAGCGGCGCCGCTCTGGGCATGGTAGCCGACTGCGGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000491546.5
ENST00000672652.1
CDS CCA 72 bp CCCCGCAGTCGGCTACCATGCCCAGAGCGGCGCCGCTaGCCGGGTCTTGCACGGGGAAGGTGGCGGCGGCCG +
Preference number: 6 (lower is better)
Translates to: PRSRLPCPERRR*PGLARGRWRRP
Trigger: CGGCCGCCGCCACCTTCCCCGTGCAAGACCCGGCCAGCGGCGCCGCTCTGGGCATGGTAGCCGACTGCGGGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000491546.5
ENST00000672652.1
CDS GCA 72 bp ACCCGAGGCGCCGGGCCCCACAGCTCCGCAGCCAAATaGAGGTCGCCATGGCCCGGGCAACGACGGCGACAG +
Preference number: 6 (lower is better)
Translates to: TRGAGPHSSAAK*RSPWPGQRRRQ
Trigger: CTGTCGCCGTCGTTGCCCGGGCCATGGCGACCTGCATTTGGCTGCGGAGCTGTGGGGCCCGGCGCCTCGGGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000491546.5
CDS CCA 72 bp GGGCCCCACAGCTCCGCAGCCAAATGCAGGTCGCCATaGCCCGGGCAACGACGGCGACAGGAAACAGGCAAG +
Preference number: 6 (lower is better)
Translates to: GPHSSAAKCRSP*PGQRRRQETGK
Trigger: CTTGCCTGTTTCCTGTCGCCGTCGTTGCCCGGGCCATGGCGACCTGCATTTGGCTGCGGAGCTGTGGGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491546.5
CDS CCA 72 bp AGCTCCATAGAGACCCTTTTCACAGAGTTTGCTGCGTaGTGCAACAGGATCTCAGCCAGGGCCAGGGCGGAG +
Preference number: 6 (lower is better)
Translates to: SSIETLFTEFAA*CNRISARARAE
Trigger: CTCCGCCCTGGCCCTGGCTGAGATCCTGTTGCACCACGCAGCAAACTCTGTGAAAAGGGTCTCTATGGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672352.1
CDS TCA 72 bp CCCACACAGTCTGTCAGAAGCTGCAGACCTGACCAGTaGACGTGTGGCTGCTACCGCCTCTCTGTGAAAACA +
Preference number: 6 (lower is better)
Translates to: PTQSVRSCRPDQ*TCGCYRLSVKT
Trigger: TGTTTTCACAGAGAGGCGGTAGCAGCCACACGTTCACTGGTCAGGTCTGCAGCTTCTGACAGACTGTGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479394.2
CDS CCA 72 bp GACACCAGACATTGTCATTCCTGGTACTCAGGACTTTaGACCCAGTCTGGAACTCAGACTGGACATATCAGC +
Preference number: 6 (lower is better)
Translates to: DTRHCHSWYSGL*TQSGTQTGHIS
Trigger: GCTGATATGTCCAGTCTGAGTTCCAGACTGGGTCCAAAGTCCTGAGTACCAGGAATGACAATGTCTGGTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675422.1
CDS CCA 72 bp TTCCTCCTGTTGTCAGACACCAGACATTGTCATTCCTaGTACTCAGGACTTTGGACCCAGTCTGGAACTCAG +
Preference number: 6 (lower is better)
Translates to: FLLLSDTRHCHS*YSGLWTQSGTQ
Trigger: CTGAGTTCCAGACTGGGTCCAAAGTCCTGAGTACCAGGAATGACAATGTCTGGTGTCTGACAACAGGAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675422.1
CDS CAA 90 bp CATGAGCTAGGACATCCATTTCCTCCTGTTGTCAGACACCAGACATaGTCATTCCTGGTACTCAGGACTTTGGACCCAGTCTGGAACTCA +
Preference number: 6 (lower is better)
Translates to: HELGHPFPPVVRHQT*SFLVLRTLDPVWNS
Trigger: TGAGTTCCAGACTGGGTCCAAAGTCCTGAGTACCAGGAATGACAATGTCTGGTGTCTGACAACAGGAGGAAATGGATGTCCTAGCTCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675422.1
CDS CAA 90 bp GCCTCCCCTACTTCCTTGGCATTCTTTCGAGAACAGGGAATAACATaGTATACACCTGAAGGAATCCCAGCCTGGCTTGCAAGCAACAAT +
Preference number: 6 (lower is better)
Translates to: ASPTSLAFFREQGIT*YTPEGIPAWLASNN
Trigger: ATTGTTGCTTGCAAGCCAGGCTGGGATTCCTTCAGGTGTATACAATGTTATTCCCTGTTCTCGAAAGAATGCCAAGGAAGTAGGGGAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348925.2
CDS CAA 90 bp GCCTCCCCTACTTCCTTGGCATTCTTTCGAGAACAGGGAATAACATaGTATACACCTGAAGGAATCCCAGCCTGGCTTGCAAGCTATAAA +
Preference number: 6 (lower is better)
Translates to: ASPTSLAFFREQGIT*YTPEGIPAWLASYK
Trigger: TTTATAGCTTGCAAGCCAGGCTGGGATTCCTTCAGGTGTATACAATGTTATTCCCTGTTCTCGAAAGAATGCCAAGGAAGTAGGGGAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672652.1
CDS TCA 72 bp CAAAGTGGCAGAGGAAGAGCAAATTCACTCTCTGCATaGGCTAGGACATCCATTTCCTCCTGTTGTCAGACA +
Preference number: 6 (lower is better)
Translates to: QSGRGRANSLSA*ARTSISSCCQT
Trigger: TGTCTGACAACAGGAGGAAATGGATGTCCTAGCTCATGCAGAGAGTGAATTTGCTCTTCCTCTGCCACTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675422.1
CDS TCA 72 bp TCCTGGAGAATTTCTCAGTGCACCAAGCCAGAACCCTaGACTTACACTTTCAGCTGTGATTATTCTGGCAAG +
Preference number: 6 (lower is better)
Translates to: SWRISQCTKPEP*TYTFSCDYSGK
Trigger: CTTGCCAGAATAATCACAGCTGAAAGTGTAAGTTCAGGGTTCTGGCTTGGTGCACTGAGAAATTCTCCAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672557.1
CDS CCA 72 bp ACAAAGGCATCATGGATGCCCCTTTGCACCAAGAATTaGTTTGAGCAAACACAAGTCTGGACAGGAGACAAA +
Preference number: 6 (lower is better)
Translates to: TKASWMPLCTKN*FEQTQVWTGDK
Trigger: TTTGTCTCCTGTCCAGACTTGTGTTTGCTCAAACCAATTCTTGGTGCAAAGGGGCATCCATGATGCCTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479394.2
CDS CAA 72 bp AGGCATCATGGATGCCCCTTTGCACCAAGAATTGGTTaGAGCAAACACAAGTCTGGACAGGAGACAAAAACA +
Preference number: 6 (lower is better)
Translates to: RHHGCPFAPRIG*SKHKSGQETKT
Trigger: TGTTTTTGTCTCCTGTCCAGACTTGTGTTTGCTCAAACCAATTCTTGGTGCAAAGGGGCATCCATGATGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479394.2
CDS TCA 72 bp ATTCTTTCGAGAACAGGGAATAACATTGTATACACCTaGAGGAATCCCAGCCTGGCTTGCAAGCAACAATGG +
Preference number: 6 (lower is better)
Translates to: ILSRTGNNIVYT*RNPSLACKQQW
Trigger: CCATTGTTGCTTGCAAGCCAGGCTGGGATTCCTTCAGGTGTATACAATGTTATTCCCTGTTCTCGAAAGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348925.2
CDS TCA 72 bp GCCTTCAAAAATTCAGGTGGGTATCATCCAATCTGCTaGGAACCTGAAAAGAACAAAGTGGCAGAGGAAGAG +
Preference number: 6 (lower is better)
Translates to: AFKNSGGYHPIC*EPEKNKVAEEE
Trigger: CTCTTCCTCTGCCACTTTGTTCTTTTCAGGTTCTCAGCAGATTGGATGATACCCACCTGAATTTTTGAAGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675422.1
CDS TCA 72 bp TGCTTTTCTACCGCTTTTTCATTAATTAATGGGCCCTaGGTAGTTCCTTCCTCAAATCCATTACCTACGCGC +
Preference number: 6 (lower is better)
Translates to: CFSTAFSLINGP*VVPSSNPLPTR
Trigger: GCGCGTAGGTAATGGATTTGAGGAAGGAACTACTCAGGGCCCATTAATTAATGAAAAAGCGGTAGAAAAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672619.1
CDS CAA 90 bp GCTGTGATTATTCTGGCAAGGTCATCCTTATTTTGTATCATTAAATaGTACCACTTCCGAAGTAATGAACTCCTCTCCTTGGCGGAGACC +
Preference number: 6 (lower is better)
Translates to: AVIILARSSLFCIIK*YHFRSNELLSLAET
Trigger: GGTCTCCGCCAAGGAGAGGAGTTCATTACTTCGGAAGTGGTACAATTTAATGATACAAAATAAGGATGACCTTGCCAGAATAATCACAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672557.1
ENST00000672652.1
CDS TCA 72 bp AAATTCAGGTGGGTATCATCCAATCTGCTGAGAACCTaGAAAGAACAAAGTGGCAGAGGAAGAGCAAATTCA +
Preference number: 6 (lower is better)
Translates to: KFRWVSSNLLRT*KEQSGRGRANS
Trigger: TGAATTTGCTCTTCCTCTGCCACTTTGTTCTTTTCAGGTTCTCAGCAGATTGGATGATACCCACCTGAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675422.1
CDS CAA 72 bp ATTCTGGCAAGGTCATCCTTATTTTGTATCATTAAATaGTACCACTTCCGAAGTAATGAACTCCTCTCCTGC +
Preference number: 6 (lower is better)
Translates to: ILARSSLFCIIK*YHFRSNELLSC
Trigger: GCAGGAGAGGAGTTCATTACTTCGGAAGTGGTACAATTTAATGATACAAAATAAGGATGACCTTGCCAGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675422.1
CDS CAA 72 bp ATTCTGGCAAGGTCATCCTTATTTTGTATCATTAAATaGTACCACTTCCGAAGTAATGAACTCCTCTCCTTG +
Preference number: 6 (lower is better)
Translates to: ILARSSLFCIIK*YHFRSNELLSL
Trigger: CAAGGAGAGGAGTTCATTACTTCGGAAGTGGTACAATTTAATGATACAAAATAAGGATGACCTTGCCAGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348925.2
ENST00000357578.8
ENST00000672352.1
ENST00000672557.1
ENST00000672652.1
CDS CAA 90 bp GCTGTGATTATTCTGGCAAGGTCATCCTTATTTTGTATCATTAAATaGTACCACTTCCGAAGTAATGAACTCCTCTCCTGCAAAAGAAAT +
Preference number: 6 (lower is better)
Translates to: AVIILARSSLFCIIK*YHFRSNELLSCKRN
Trigger: ATTTCTTTTGCAGGAGAGGAGTTCATTACTTCGGAAGTGGTACAATTTAATGATACAAAATAAGGATGACCTTGCCAGAATAATCACAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675422.1
CDS TCA 72 bp TGTTTTCGGAAGAGATTAGCATTTGAATCAGTAGACTaGATAAAGAAGATTTGCCTTCAAAAATTCAGGTGG +
Preference number: 6 (lower is better)
Translates to: CFRKRLAFESVD*IKKICLQKFRW
Trigger: CCACCTGAATTTTTGAAGGCAAATCTTCTTTATTCAGTCTACTGATTCAAATGCTAATCTCTTCCGAAAACA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675422.1