RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ALDH4A1 (Homo sapiens)

Ensembl gene IDs: ENSG00000159423

Ensembl transcript IDs: ENST00000290597.9, ENST00000375341.8, ENST00000432718.1, ENST00000454547.1, ENST00000538309.5, ENST00000538839.5

Found 498 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCCAAAGGATCCCAAGAGCTGCTCCATCTCCTTTCCCCAGGTCCCTaGGCCACTGGGCCCAGTGGAGGGCAGAGGGAGAACCTGCCAGGC +
Preference number: 1 (lower is better)
Translates to: PKGSQELLHLLSPGP*ATGPSGGQRENLPG
Trigger: GCCTGGCAGGTTCTCCCTCTGCCCTCCACTGGGCCCAGTGGCTCAGGGACCTGGGGAAAGGAGATGGAGCAGCTCTTGGGATCCTTTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
3UTR CCA 90 bp TCCATGGGCCAGTGGCACTTGGGGAATGGCCACACCAGCTCCGGGTaGGGTCCCATGCAGGCATCCTGGAGGAAGACCCAACACTTTCAC +
Preference number: 1 (lower is better)
Translates to: SMGQWHLGNGHTSSG*GPMQASWRKTQHFH
Trigger: GTGAAAGTGTTGGGTCTTCCTCCAGGATGCCTGCATGGGACCCCACCCGGAGCTGGTGTGGCCATTCCCCAAGTGCCACTGGCCCATGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
3UTR CCA 90 bp GGTGCAGACCGGGAATCACACAGGCCTCGGCCAAACACAGGCACCTaGAGTAAGGCATGCCAGCATCTAAGGTGTGTGGCTGGGGACAGG +
Preference number: 1 (lower is better)
Translates to: GADRESHRPRPNTGT*SKACQHLRCVAGDR
Trigger: CCTGTCCCCAGCCACACACCTTAGATGCTGGCATGCCTTACTCCAGGTGCCTGTGTTTGGCCGAGGCCTGTGTGATTCCCGGTCTGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
3UTR CCA 90 bp GGAGGGCCAATGTCTGCCTTGGCCTGTGTCACCATGGCACAGTGGTaGCTGAGCTCCTGCAGGGAAATCCCAGACCCTGAGACTGGCTCT +
Preference number: 1 (lower is better)
Translates to: GGPMSALACVTMAQW*LSSCREIPDPETGS
Trigger: AGAGCCAGTCTCAGGGTCTGGGATTTCCCTGCAGGAGCTCAGCCACCACTGTGCCATGGTGACACAGGCCAAGGCAGACATTGGCCCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
3UTR CCA 90 bp AAGGGAGGGCCAATGTCTGCCTTGGCCTGTGTCACCATGGCACAGTaGTGGCTGAGCTCCTGCAGGGAAATCCCAGACCCTGAGACTGGC +
Preference number: 1 (lower is better)
Translates to: KGGPMSALACVTMAQ*WLSSCREIPDPETG
Trigger: GCCAGTCTCAGGGTCTGGGATTTCCCTGCAGGAGCTCAGCCACCACTGTGCCATGGTGACACAGGCCAAGGCAGACATTGGCCCTCCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
3UTR CCA 90 bp GGCCATGTTCCTCCCCAGCACGATCTCAAACCAGAGCCTGAGGCATaGGAGAGGCCAGAATACAGTGGTAAGAAGGGAGTCAAGCCCGGA +
Preference number: 1 (lower is better)
Translates to: GHVPPQHDLKPEPEA*ERPEYSGKKGVKPG
Trigger: TCCGGGCTTGACTCCCTTCTTACCACTGTATTCTGGCCTCTCCCATGCCTCAGGCTCTGGTTTGAGATCGTGCTGGGGAGGAACATGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
3UTR TCA 90 bp GAGTGGAGGTCTCTACAGGTAGGGCCTGAGGATCAAAGGGAAGGCTaGCATAGGACGAAGGCCCATCCAAGGTTTTCCAGAATCACGGCC +
Preference number: 1 (lower is better)
Translates to: EWRSLQVGPEDQREG*HRTKAHPRFSRITA
Trigger: GGCCGTGATTCTGGAAAACCTTGGATGGGCCTTCGTCCTATGTCAGCCTTCCCTTTGATCCTCAGGCCCTACCTGTAGAGACCTCCACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
3UTR-3UTR GCA 90 bp TGGCACCAGCACCCACCCCCATCCATGGGCCAGTGGCACTTGGGGAATGGCCACCCCCACCCAGCCACCTaGCCCGGCCCCTCATGGGAA +
Preference number: 2 (lower is better)
Translates to: WHQHPPPSMGQWHLGNGHPHPAT*PGPSWE
Trigger: TTCCCATGAGGGGCCGGGGCAGGTGGCTGGGTGGGG...GTGGCCATTCCCCAAGTGCCACTGGCCCATGGATGGGGGTGGGTGCTGGTGCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
3UTR-3UTR TCA 90 bp CAGTGGCACTTGGGGAATGGCCACACCAGCTCCGGGTGGGGTCCCATGCAGGCAGTCCTCGGCCCATGCTaGCGAACCCAAGGCCAGGCC +
Preference number: 2 (lower is better)
Translates to: QWHLGNGHTSSGWGPMQAVLGPC*RTQGQA
Trigger: GGCCTGGCCTTGGGTTCGTCAGCATGGGCCGAGGAC...TGCCTGCATGGGACCCCACCCGGAGCTGGTGTGGCCATTCCCCAAGTGCCACTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
3UTR-3UTR CCA 90 bp TGGCACCAGCACCCACCCCCATCCATGGGCCAGTGGCACTTGGGGAATGGCCACTCCCATCCCACGCCTTaGCAGGTGGCCTCCAGCGGC +
Preference number: 2 (lower is better)
Translates to: WHQHPPPSMGQWHLGNGHSHPTP*QVASSG
Trigger: GCCGCTGGAGGCCACCTGCCAAGGCGTGGGATGGGA...GTGGCCATTCCCCAAGTGCCACTGGCCCATGGATGGGGGTGGGTGCTGGTGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
3UTR-3UTR CCA 90 bp TGGCACCAGCACCCACCCCCATCCATGGGCCAGTGGCACTTGGGGAATGGCCACGGACGGACAGACAGCTaGACGGTGGAGCCCGAGAGG +
Preference number: 2 (lower is better)
Translates to: WHQHPPPSMGQWHLGNGHGRTDS*TVEPER
Trigger: CCTCTCGGGCTCCACCGTCCAGCTGTCTGTCCGTCC...GTGGCCATTCCCCAAGTGCCACTGGCCCATGGATGGGGGTGGGTGCTGGTGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
3UTR-3UTR CCA 90 bp CAGTGGCACTTGGGGAATGGCCACACCAGCTCCGGGTGGGGTCCCATGCAGGCACACACCAGCTCCGGGTaGGGTCCCATGCAGGCATCC +
Preference number: 2 (lower is better)
Translates to: QWHLGNGHTSSGWGPMQAHTSSG*GPMQAS
Trigger: GGATGCCTGCATGGGACCCCACCCGGAGCTGGTGTG...TGCCTGCATGGGACCCCACCCGGAGCTGGTGTGGCCATTCCCCAAGTGCCACTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
3UTR-3UTR GCA 90 bp CAGTGGCACTTGGGGAATGGCCACACCAGCTCCGGGTGGGGTCCCATGCAGGCACCGGGTGGGGTCCCATaGAGGCATCCTGGAGGAAGA +
Preference number: 2 (lower is better)
Translates to: QWHLGNGHTSSGWGPMQAPGGVP*RHPGGR
Trigger: TCTTCCTCCAGGATGCCTGCATGGGACCCCACCCGG...TGCCTGCATGGGACCCCACCCGGAGCTGGTGTGGCCATTCCCCAAGTGCCACTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
3UTR-3UTR GCA 90 bp CCAGCACCCACCCCCATCCATGGGCCAGTGGCACTTGGGGAATGGCCACACCAGCCGGGTGGGGTCCCATaGAGGCATCCTGGAGGAAGA +
Preference number: 2 (lower is better)
Translates to: PAPTPIHGPVALGEWPHQPGGVP*RHPGGR
Trigger: TCTTCCTCCAGGATGCCTGCATGGGACCCCACCCGG...CTGGTGTGGCCATTCCCCAAGTGCCACTGGCCCATGGATGGGGGTGGGTGCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
3UTR-3UTR GCA 90 bp TGGCACCAGCACCCACCCCCATCCATGGGCCAGTGGCACTTGGGGAATGGCCACGAATACTCCAGCCTGTaGCCCCACCCAGCCACCTGC +
Preference number: 2 (lower is better)
Translates to: WHQHPPPSMGQWHLGNGHEYSSL*PHPATC
Trigger: GCAGGTGGCTGGGTGGGGGCACAGGCTGGAGTATTC...GTGGCCATTCCCCAAGTGCCACTGGCCCATGGATGGGGGTGGGTGCTGGTGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
3UTR-3UTR GCA 90 bp TGGCACCAGCACCCACCCCCATCCATGGGCCAGTGGCACTTGGGGAATGGCCACCTGGAGTGGGGTCTGTaGAGTGAGGTCGGCCACCTG +
Preference number: 2 (lower is better)
Translates to: WHQHPPPSMGQWHLGNGHLEWGL*SEVGHL
Trigger: CAGGTGGCCGACCTCACTGCACAGACCCCACTCCAG...GTGGCCATTCCCCAAGTGCCACTGGCCCATGGATGGGGGTGGGTGCTGGTGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
3UTR-3UTR CCA 90 bp GAATGGGCCAGTGAGGGACTGGTCCACACAGAGCCACTCCCAGGCAGAGGAGGACCAAGGCCAGGCCTCTaGGGGCTGGGAGAAGGGAGG +
Preference number: 2 (lower is better)
Translates to: EWASEGLVHTEPLPGRGGPRPGL*GLGEGR
Trigger: CCTCCCTTCTCCCAGCCCCCAGAGGCCTGGCCTTGG...TCCTCCTCTGCCTGGGAGTGGCTCTGTGTGGACCAGTCCCTCACTGGCCCATTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
3UTR-3UTR CCA 90 bp TGGCACCAGCACCCACCCCCATCCATGGGCCAGTGGCACTTGGGGAATGGCCACTGGGCCAGTGGCACTTaGGGAATGGCCACACCAGCT +
Preference number: 2 (lower is better)
Translates to: WHQHPPPSMGQWHLGNGHWASGT*GMATPA
Trigger: AGCTGGTGTGGCCATTCCCCAAGTGCCACTGGCCCA...GTGGCCATTCCCCAAGTGCCACTGGCCCATGGATGGGGGTGGGTGCTGGTGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
3UTR-3UTR CCA 90 bp ACCAGCACCCACCCCCATCCATGGGCCAGTGGCACTTGGGGAATGGCCACACCAACCCACCCCCATCCATaGGCCAGTGGCACTTGGGGA +
Preference number: 2 (lower is better)
Translates to: TSTHPHPWASGTWGMATPTHPHP*ASGTWG
Trigger: TCCCCAAGTGCCACTGGCCCATGGATGGGGGTGGGT...TGGTGTGGCCATTCCCCAAGTGCCACTGGCCCATGGATGGGGGTGGGTGCTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
3UTR-3UTR TCA 90 bp GTGGGGTCCCATGCAGGCATCCTGGAGGAAGACCCAACACTTTCACAGTCCCCTGTGGGGTCTGTGCAGTaGGGTCGGCCACCTGGACGG +
Preference number: 2 (lower is better)
Translates to: VGSHAGILEEDPTLSQSPVGSVQ*GRPPGR
Trigger: CCGTCCAGGTGGCCGACCTCACTGCACAGACCCCAC...AGGGGACTGTGAAAGTGTTGGGTCTTCCTCCAGGATGCCTGCATGGGACCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
3UTR-3UTR CCA 90 bp CAGTGGCACTTGGGGAATGGCCACACCAGCTCCGGGTGGGGTCCCATGCAGGCAGCCTACTGGCCCAGGTaGGTCTGGGCAAAGATACAG +
Preference number: 2 (lower is better)
Translates to: QWHLGNGHTSSGWGPMQAAYWPR*VWAKIQ
Trigger: CTGTATCTTTGCCCAGACCCACCTGGGCCAGTAGGC...TGCCTGCATGGGACCCCACCCGGAGCTGGTGTGGCCATTCCCCAAGTGCCACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
3UTR-3UTR GCA 90 bp GGTCATACCTCCCACATGGCCGATGGGATAAGGGGTAGTGGCCATGTTCCTCCCCTGGAGTGGGGTCTGTaGAGTGAGGTCGGCCACCTG +
Preference number: 2 (lower is better)
Translates to: GHTSHMADGIRGSGHVPPLEWGL*SEVGHL
Trigger: CAGGTGGCCGACCTCACTGCACAGACCCCACTCCAG...GGGAGGAACATGGCCACTACCCCTTATCCCATCGGCCATGTGGGAGGTATGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
3UTR-3UTR CCA 90 bp TGGCTGAGCTCCTGCAGGGAAATCCCAGACCCTGAGACTGGCTCTAGGAGTGGAGTGAGGTCGGCCACCTaGACGGACAGACAGCTGGAC +
Preference number: 2 (lower is better)
Translates to: WLSSCREIPDPETGSRSGVRSAT*TDRQLD
Trigger: GTCCAGCTGTCTGTCCGTCCAGGTGGCCGACCTCAC...TCCACTCCTAGAGCCAGTCTCAGGGTCTGGGATTTCCCTGCAGGAGCTCAGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
3UTR-3UTR CCA 90 bp ACCAGCACCCACCCCCATCCATGGGCCAGTGGCACTTGGGGAATGGCCACACCACCAGAGCCTGAGGCATaGGAGAGGCCAGAATACAGT +
Preference number: 2 (lower is better)
Translates to: TSTHPHPWASGTWGMATPPEPEA*ERPEYS
Trigger: ACTGTATTCTGGCCTCTCCCATGCCTCAGGCTCTGG...TGGTGTGGCCATTCCCCAAGTGCCACTGGCCCATGGATGGGGGTGGGTGCTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
3UTR-3UTR CCA 90 bp GAATGGGCCAGTGAGGGACTGGTCCACACAGAGCCACTCCCAGGCAGAGGAGGAGCCTACTGGCCCAGGTaGGTCTGGGCAAAGATACAG +
Preference number: 2 (lower is better)
Translates to: EWASEGLVHTEPLPGRGGAYWPR*VWAKIQ
Trigger: CTGTATCTTTGCCCAGACCCACCTGGGCCAGTAGGC...TCCTCCTCTGCCTGGGAGTGGCTCTGTGTGGACCAGTCCCTCACTGGCCCATTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
3UTR-3UTR CCA 90 bp ACCAGCACCCACCCCCATCCATGGGCCAGTGGCACTTGGGGAATGGCCACACCAAGCAGGAGGCATCTGTaGGAGGAATCGTGGTCACAG +
Preference number: 2 (lower is better)
Translates to: TSTHPHPWASGTWGMATPSRRHL*EESWSQ
Trigger: CTGTGACCACGATTCCTCCCACAGATGCCTCCTGCT...TGGTGTGGCCATTCCCCAAGTGCCACTGGCCCATGGATGGGGGTGGGTGCTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
3UTR-3UTR CCA 90 bp TCTGGGCAAAGATACAGTGAGGAAGGTAGACAGCCCAGACCAGAGAGGGCAAGGGGACGGACAGACAGCTaGACGGTGGAGCCCGAGAGG +
Preference number: 2 (lower is better)
Translates to: SGQRYSEEGRQPRPERARGRTDS*TVEPER
Trigger: CCTCTCGGGCTCCACCGTCCAGCTGTCTGTCCGTCC...CCTTGCCCTCTCTGGTCTGGGCTGTCTACCTTCCTCACTGTATCTTTGCCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
3UTR-3UTR CCA 90 bp TCTGGGCAAAGATACAGTGAGGAAGGTAGACAGCCCAGACCAGAGAGGGCAAGGCACACCAGCTCCGGGTaGGGTCCCATGCAGGCATCC +
Preference number: 2 (lower is better)
Translates to: SGQRYSEEGRQPRPERARHTSSG*GPMQAS
Trigger: GGATGCCTGCATGGGACCCCACCCGGAGCTGGTGTG...CCTTGCCCTCTCTGGTCTGGGCTGTCTACCTTCCTCACTGTATCTTTGCCCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
3UTR-3UTR CCA 90 bp AATGACACATATCCTGGAAGGACACAGAACCCACACCCAGCCCAGCTGGCACCACACACCAGCTCCGGGTaGGGTCCCATGCAGGCATCC +
Preference number: 2 (lower is better)
Translates to: NDTYPGRTQNPHPAQLAPHTSSG*GPMQAS
Trigger: GGATGCCTGCATGGGACCCCACCCGGAGCTGGTGTG...TGGTGCCAGCTGGGCTGGGTGTGGGTTCTGTGTCCTTCCAGGATATGTGTCATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
3UTR-3UTR TCA 90 bp ATCCATGGGCCAGTGGCACTTGGGGAATGGCCACACCAGCTCCGGGTGGGGTCCTGCTTTACAGATCTCTaGCCACTCAGAATCCAAGCA +
Preference number: 2 (lower is better)
Translates to: IHGPVALGEWPHQLRVGSCFTDL*PLRIQA
Trigger: TGCTTGGATTCTGAGTGGTCAGAGATCTGTAAAGCA...GGACCCCACCCGGAGCTGGTGTGGCCATTCCCCAAGTGCCACTGGCCCATGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
3UTR-3UTR TCA 90 bp GAATGGGCCAGTGAGGGACTGGTCCACACAGAGCCACTCCCAGGCAGAGGAGGATTATTGGGTGGCATCTaGGCAAATCCCATTGCCACC +
Preference number: 2 (lower is better)
Translates to: EWASEGLVHTEPLPGRGGLLGGI*ANPIAT
Trigger: GGTGGCAATGGGATTTGCTCAGATGCCACCCAATAA...TCCTCCTCTGCCTGGGAGTGGCTCTGTGTGGACCAGTCCCTCACTGGCCCATTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
3UTR-3UTR TCA 90 bp TGGCTGAGCTCCTGCAGGGAAATCCCAGACCCTGAGACTGGCTCTAGGAGTGGATCTACAGGTAGGGCCTaGGGATCAAAGGGAAGGCTG +
Preference number: 2 (lower is better)
Translates to: WLSSCREIPDPETGSRSGSTGRA*GSKGRL
Trigger: CAGCCTTCCCTTTGATCCTCAGGCCCTACCTGTAGA...TCCACTCCTAGAGCCAGTCTCAGGGTCTGGGATTTCCCTGCAGGAGCTCAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
3UTR-3UTR GCA 90 bp TCTGGGCAAAGATACAGTGAGGAAGGTAGACAGCCCAGACCAGAGAGGGCAAGGGGCAGAGGGAGAACCTaGCAGGCACCAGGGTCATAC +
Preference number: 2 (lower is better)
Translates to: SGQRYSEEGRQPRPERARGRGRT*QAPGSY
Trigger: GTATGACCCTGGTGCCTGGCAGGTTCTCCCTCTGCC...CCTTGCCCTCTCTGGTCTGGGCTGTCTACCTTCCTCACTGTATCTTTGCCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
3UTR-3UTR CCA 90 bp TCCAAGCAGGAGGCATCTGTGGGAGGAATCGTGGTCACAGATTGGCTGCGTCAATGGGCCAGTGGCACTTaGGGAATGGCCACACCAGCT +
Preference number: 2 (lower is better)
Translates to: SKQEASVGGIVVTDWLRQWASGT*GMATPA
Trigger: AGCTGGTGTGGCCATTCCCCAAGTGCCACTGGCCCA...TTGACGCAGCCAATCTGTGACCACGATTCCTCCCACAGATGCCTCCTGCTTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
3UTR-3UTR CCA 90 bp CAGTGTAGAACCAGTAGAACTAAGAATACTCCAGCCTGTGCCCCCACCCAGCCAACCCACCCCCATCCATaGGCCAGTGGCACTTGGGGA +
Preference number: 2 (lower is better)
Translates to: QCRTSRTKNTPACAPTQPTHPHP*ASGTWG
Trigger: TCCCCAAGTGCCACTGGCCCATGGATGGGGGTGGGT...TGGCTGGGTGGGGGCACAGGCTGGAGTATTCTTAGTTCTACTGGTTCTACACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
3UTR-3UTR TCA 90 bp CCCACCCCCATCCATGGGCCAGTGGCACTTGGGGAATGGCCACACCAGCTCCGGCCTAAGAACCATCCTTaGAAGTCATGCTTTACAGAT +
Preference number: 2 (lower is better)
Translates to: PTPIHGPVALGEWPHQLRPKNHP*KSCFTD
Trigger: ATCTGTAAAGCATGACTTTCAAGGATGGTTCTTAGG...CCGGAGCTGGTGTGGCCATTCCCCAAGTGCCACTGGCCCATGGATGGGGGTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
3UTR-3UTR TCA 90 bp TCCTGGAGGAAGACCCAACACTTTCACAGTCCCCTAAGAACCATCCTTGAAAGTGTGGGGTCTGTGCAGTaGGGTCGGCCACCTGGACGG +
Preference number: 2 (lower is better)
Translates to: SWRKTQHFHSPLRTILESVGSVQ*GRPPGR
Trigger: CCGTCCAGGTGGCCGACCTCACTGCACAGACCCCAC...ACTTTCAAGGATGGTTCTTAGGGGACTGTGAAAGTGTTGGGTCTTCCTCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
3UTR-3UTR TCA 90 bp AATGACACATATCCTGGAAGGACACAGAACCCACACCCAGCCCAGCTGGCACCATCTCAAACCAGAGCCTaGGGCATGGGAGAGGCCAGA +
Preference number: 2 (lower is better)
Translates to: NDTYPGRTQNPHPAQLAPSQTRA*GMGEAR
Trigger: TCTGGCCTCTCCCATGCCTCAGGCTCTGGTTTGAGA...TGGTGCCAGCTGGGCTGGGTGTGGGTTCTGTGTCCTTCCAGGATATGTGTCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
3UTR-3UTR GCA 90 bp TCCAAGCAGGAGGCATCTGTGGGAGGAATCGTGGTCACAGATTGGCTGCGTCAAGGGAGGGCCAATGTCTaGCTTGGCCTGTGTCACCAT +
Preference number: 2 (lower is better)
Translates to: SKQEASVGGIVVTDWLRQGRANV*LGLCHH
Trigger: ATGGTGACACAGGCCAAGGCAGACATTGGCCCTCCC...TTGACGCAGCCAATCTGTGACCACGATTCCTCCCACAGATGCCTCCTGCTTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
3UTR-3UTR CCA 90 bp CCTACTGGCCCAGGTGGGTCTGGGCAAAGATACAGTGAGGAAGGTAGACAGCCCCCCATGCAGGCATCCTaGAGGAAGACCCAACACTTT +
Preference number: 2 (lower is better)
Translates to: PTGPGGSGQRYSEEGRQPPMQAS*RKTQHF
Trigger: AAAGTGTTGGGTCTTCCTCCAGGATGCCTGCATGGG...GGGCTGTCTACCTTCCTCACTGTATCTTTGCCCAGACCCACCTGGGCCAGTAGG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
3UTR-3UTR CCA 90 bp TGGCTGAGCTCCTGCAGGGAAATCCCAGACCCTGAGACTGGCTCTAGGAGTGGACCAAACACAGGCACCTaGAGTAAGGCATGCCAGCAT +
Preference number: 2 (lower is better)
Translates to: WLSSCREIPDPETGSRSGPNTGT*SKACQH
Trigger: ATGCTGGCATGCCTTACTCCAGGTGCCTGTGTTTGG...TCCACTCCTAGAGCCAGTCTCAGGGTCTGGGATTTCCCTGCAGGAGCTCAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
3UTR-3UTR CCA 90 bp CACTCAGAATCCAAGCAGGAGGCATCTGTGGGAGGAATCGTGGTCACAGATTGGGTCACCATGGCACAGTaGTGGCTGAGCTCCTGCAGG +
Preference number: 2 (lower is better)
Translates to: HSESKQEASVGGIVVTDWVTMAQ*WLSSCR
Trigger: CCTGCAGGAGCTCAGCCACCACTGTGCCATGGTGAC...CCAATCTGTGACCACGATTCCTCCCACAGATGCCTCCTGCTTGGATTCTGAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
3UTR-3UTR GCA 90 bp CACTCAGAATCCAAGCAGGAGGCATCTGTGGGAGGAATCGTGGTCACAGATTGGTGGTGGCTGAGCTCCTaGAGGGAAATCCCAGACCCT +
Preference number: 2 (lower is better)
Translates to: HSESKQEASVGGIVVTDWWWLSS*REIPDP
Trigger: AGGGTCTGGGATTTCCCTGCAGGAGCTCAGCCACCA...CCAATCTGTGACCACGATTCCTCCCACAGATGCCTCCTGCTTGGATTCTGAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
3UTR-3UTR CCA 90 bp TCCTGGAGGAAGACCCAACACTTTCACAGTCCCCTAAGAACCATCCTTGAAAGTGGACGGACAGACAGCTaGACGGTGGAGCCCGAGAGG +
Preference number: 2 (lower is better)
Translates to: SWRKTQHFHSPLRTILESGRTDS*TVEPER
Trigger: CCTCTCGGGCTCCACCGTCCAGCTGTCTGTCCGTCC...ACTTTCAAGGATGGTTCTTAGGGGACTGTGAAAGTGTTGGGTCTTCCTCCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
3UTR-3UTR CCA 90 bp TCTGGGCAAAGATACAGTGAGGAAGGTAGACAGCCCAGACCAGAGAGGGCAAGGCCAGAGCCTGAGGCATaGGAGAGGCCAGAATACAGT +
Preference number: 2 (lower is better)
Translates to: SGQRYSEEGRQPRPERARPEPEA*ERPEYS
Trigger: ACTGTATTCTGGCCTCTCCCATGCCTCAGGCTCTGG...CCTTGCCCTCTCTGGTCTGGGCTGTCTACCTTCCTCACTGTATCTTTGCCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
3UTR-3UTR CCA 90 bp CACAGTCCCCTAAGAACCATCCTTGAAAGTCATGCTTTACAGATCTCTGACCACCCAAGGCCAGGCCTCTaGGGGCTGGGAGAAGGGAGG +
Preference number: 2 (lower is better)
Translates to: HSPLRTILESHALQISDHPRPGL*GLGEGR
Trigger: CCTCCCTTCTCCCAGCCCCCAGAGGCCTGGCCTTGG...GTGGTCAGAGATCTGTAAAGCATGACTTTCAAGGATGGTTCTTAGGGGACTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
3UTR-3UTR CCA 90 bp CAGTGTAGAACCAGTAGAACTAAGAATACTCCAGCCTGTGCCCCCACCCAGCCATGCCCCGGCCCCTCATaGGAAATGACACATATCCTG +
Preference number: 2 (lower is better)
Translates to: QCRTSRTKNTPACAPTQPCPGPS*EMTHIL
Trigger: CAGGATATGTGTCATTTCCCATGAGGGGCCGGGGCA...TGGCTGGGTGGGGGCACAGGCTGGAGTATTCTTAGTTCTACTGGTTCTACACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
3UTR-3UTR TCA 90 bp GCCAGGCACCAGGGTCATACCTCCCACATGGCCGATGGGATAAGGGGTAGTGGCCCTAAGAACCATCCTTaGAAGTCATGCTTTACAGAT +
Preference number: 2 (lower is better)
Translates to: ARHQGHTSHMADGIRGSGPKNHP*KSCFTD
Trigger: ATCTGTAAAGCATGACTTTCAAGGATGGTTCTTAGG...GCCACTACCCCTTATCCCATCGGCCATGTGGGAGGTATGACCCTGGTGCCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
3UTR-3UTR GCA 90 bp TCCAAGCAGGAGGCATCTGTGGGAGGAATCGTGGTCACAGATTGGCTGCGTCAAACCTGGAGTAAGGCATaGCAGCATCTAAGGTGTGTG +
Preference number: 2 (lower is better)
Translates to: SKQEASVGGIVVTDWLRQTWSKA*QHLRCV
Trigger: CACACACCTTAGATGCTGGCATGCCTTACTCCAGGT...TTGACGCAGCCAATCTGTGACCACGATTCCTCCCACAGATGCCTCCTGCTTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
3UTR-3UTR CCA 90 bp CACAGTGTAGAACCAGTAGAACTAAGAATACTCCAGCCTGTGCCCCCACCCAGCCCCATGCAGGCATCCTaGAGGAAGACCCAACACTTT +
Preference number: 2 (lower is better)
Translates to: HSVEPVELRILQPVPPPSPMQAS*RKTQHF
Trigger: AAAGTGTTGGGTCTTCCTCCAGGATGCCTGCATGGG...GCTGGGTGGGGGCACAGGCTGGAGTATTCTTAGTTCTACTGGTTCTACACTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
3UTR-3UTR CCA 90 bp CACAGTCCCCTAAGAACCATCCTTGAAAGTCATGCTTTACAGATCTCTGACCACGTGGCACTTGGGGAATaGCCACACCAGCTCCGGGTG +
Preference number: 2 (lower is better)
Translates to: HSPLRTILESHALQISDHVALGE*PHQLRV
Trigger: CACCCGGAGCTGGTGTGGCCATTCCCCAAGTGCCAC...GTGGTCAGAGATCTGTAAAGCATGACTTTCAAGGATGGTTCTTAGGGGACTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
3UTR-3UTR CCA 90 bp CACTTTCACAGTCCCCTAAGAACCATCCTTGAAAGTCATGCTTTACAGATCTCTGGGACAGGGGCCTACTaGCCCAGGTGGGTCTGGGCA +
Preference number: 2 (lower is better)
Translates to: HFHSPLRTILESHALQISGTGAY*PRWVWA
Trigger: TGCCCAGACCCACCTGGGCCAGTAGGCCCCTGTCCC...AGAGATCTGTAAAGCATGACTTTCAAGGATGGTTCTTAGGGGACTGTGAAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
3UTR-3UTR CCA 90 bp CACTCAGAATCCAAGCAGGAGGCATCTGTGGGAGGAATCGTGGTCACAGATTGGCCAAACACAGGCACCTaGAGTAAGGCATGCCAGCAT +
Preference number: 2 (lower is better)
Translates to: HSESKQEASVGGIVVTDWPNTGT*SKACQH
Trigger: ATGCTGGCATGCCTTACTCCAGGTGCCTGTGTTTGG...CCAATCTGTGACCACGATTCCTCCCACAGATGCCTCCTGCTTGGATTCTGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
3UTR-3UTR CCA 90 bp CACAGTCCCCTAAGAACCATCCTTGAAAGTCATGCTTTACAGATCTCTGACCACGGGCCAGTGAGGGACTaGTCCACACAGAGCCACTCC +
Preference number: 2 (lower is better)
Translates to: HSPLRTILESHALQISDHGPVRD*STQSHS
Trigger: GGAGTGGCTCTGTGTGGACCAGTCCCTCACTGGCCC...GTGGTCAGAGATCTGTAAAGCATGACTTTCAAGGATGGTTCTTAGGGGACTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
3UTR-3UTR TCA 90 bp TGGGGTCCCATGCAGGCATCCTGGAGGAAGACCCAACACTTTCACAGTCCCCTATGCTTTACAGATCTCTaGCCACTCAGAATCCAAGCA +
Preference number: 2 (lower is better)
Translates to: WGPMQASWRKTQHFHSPLCFTDL*PLRIQA
Trigger: TGCTTGGATTCTGAGTGGTCAGAGATCTGTAAAGCA...TAGGGGACTGTGAAAGTGTTGGGTCTTCCTCCAGGATGCCTGCATGGGACCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
3UTR-3UTR TCA 90 bp CACAGTCCCCTAAGAACCATCCTTGAAAGTCATGCTTTACAGATCTCTGACCACAGCCTCTGTGAGTGGTaGGGTTTGCCAAGGGGCCCA +
Preference number: 2 (lower is better)
Translates to: HSPLRTILESHALQISDHSLCEW*GLPRGP
Trigger: TGGGCCCCTTGGCAAACCTCACCACTCACAGAGGCT...GTGGTCAGAGATCTGTAAAGCATGACTTTCAAGGATGGTTCTTAGGGGACTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
3UTR-3UTR CCA 90 bp TTAAGTAACAGGCATTTTATTGGGTGGCATCTGAGCAAATCCCATTGCCACCTCACCCACCCCCATCCATaGGCCAGTGGCACTTGGGGA +
Preference number: 2 (lower is better)
Translates to: LSNRHFIGWHLSKSHCHLTHPHP*ASGTWG
Trigger: TCCCCAAGTGCCACTGGCCCATGGATGGGGGTGGGT...GAGGTGGCAATGGGATTTGCTCAGATGCCACCCAATAAAATGCCTGTTACTTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000290597.9
ENST00000375341.8
3UTR-3UTR GCA 90 bp AGAACCATCCTTGAAAGTCATGCTTTACAGATCTCTGACCACTCAGAATCCAAGCCGGGTGGGGTCCCATaGAGGCATCCTGGAGGAAGA +
Preference number: 2 (lower is better)
Translates to: RTILESHALQISDHSESKPGGVP*RHPGGR
Trigger: TCTTCCTCCAGGATGCCTGCATGGGACCCCACCCGG...CTTGGATTCTGAGTGGTCAGAGATCTGTAAAGCATGACTTTCAAGGATGGTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
3UTR-3UTR CCA 90 bp AGAACCATCCTTGAAAGTCATGCTTTACAGATCTCTGACCACTCAGAATCCAAGGTGGCACTTGGGGAATaGCCACACCAGCTCCGGGTG +
Preference number: 2 (lower is better)
Translates to: RTILESHALQISDHSESKVALGE*PHQLRV
Trigger: CACCCGGAGCTGGTGTGGCCATTCCCCAAGTGCCAC...CTTGGATTCTGAGTGGTCAGAGATCTGTAAAGCATGACTTTCAAGGATGGTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
3UTR-3UTR CCA 90 bp CACTTTCACAGTCCCCTAAGAACCATCCTTGAAAGTCATGCTTTACAGATCTCTGTGAGGTCGGCCACCTaGACGGACAGACAGCTGGAC +
Preference number: 2 (lower is better)
Translates to: HFHSPLRTILESHALQISVRSAT*TDRQLD
Trigger: GTCCAGCTGTCTGTCCGTCCAGGTGGCCGACCTCAC...AGAGATCTGTAAAGCATGACTTTCAAGGATGGTTCTTAGGGGACTGTGAAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
3UTR-3UTR TCA 90 bp CACTTTCACAGTCCCCTAAGAACCATCCTTGAAAGTCATGCTTTACAGATCTCTAGCCTCTGTGAGTGGTaGGGTTTGCCAAGGGGCCCA +
Preference number: 2 (lower is better)
Translates to: HFHSPLRTILESHALQISSLCEW*GLPRGP
Trigger: TGGGCCCCTTGGCAAACCTCACCACTCACAGAGGCT...AGAGATCTGTAAAGCATGACTTTCAAGGATGGTTCTTAGGGGACTGTGAAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
3UTR-3UTR TCA 90 bp CACTTTCACAGTCCCCTAAGAACCATCCTTGAAAGTCATGCTTTACAGATCTCTTGGCACAGTGGTGGCTaGGCTCCTGCAGGGAAATCC +
Preference number: 2 (lower is better)
Translates to: HFHSPLRTILESHALQISWHSGG*APAGKS
Trigger: GGATTTCCCTGCAGGAGCTCAGCCACCACTGTGCCA...AGAGATCTGTAAAGCATGACTTTCAAGGATGGTTCTTAGGGGACTGTGAAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
3UTR-3UTR CCA 90 bp AGAACCATCCTTGAAAGTCATGCTTTACAGATCTCTGACCACTCAGAATCCAAGCCATCCATGGGCCAGTaGCACTTGGGGAATGGCCAC +
Preference number: 2 (lower is better)
Translates to: RTILESHALQISDHSESKPSMGQ*HLGNGH
Trigger: GTGGCCATTCCCCAAGTGCCACTGGCCCATGGATGG...CTTGGATTCTGAGTGGTCAGAGATCTGTAAAGCATGACTTTCAAGGATGGTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
3UTR-3UTR TCA 90 bp CACAGTCCCCTAAGAACCATCCTTGAAAGTCATGCTTTACAGATCTCTGACCACGCCCCTCATGGGAAATaGCACATATCCTGGAAGGAC +
Preference number: 2 (lower is better)
Translates to: HSPLRTILESHALQISDHAPHGK*HISWKD
Trigger: GTCCTTCCAGGATATGTGTCATTTCCCATGAGGGGC...GTGGTCAGAGATCTGTAAAGCATGACTTTCAAGGATGGTTCTTAGGGGACTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
3UTR-3UTR TCA 90 bp CACTTTCACAGTCCCCTAAGAACCATCCTTGAAAGTCATGCTTTACAGATCTCTTCTCAAACCAGAGCCTaGGGCATGGGAGAGGCCAGA +
Preference number: 2 (lower is better)
Translates to: HFHSPLRTILESHALQISSQTRA*GMGEAR
Trigger: TCTGGCCTCTCCCATGCCTCAGGCTCTGGTTTGAGA...AGAGATCTGTAAAGCATGACTTTCAAGGATGGTTCTTAGGGGACTGTGAAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
3UTR-3UTR GCA 90 bp CACAGTCCCCTAAGAACCATCCTTGAAAGTCATGCTTTACAGATCTCTGACCACAAGGATCCCAAGAGCTaGTCCATCTCCTTTCCCCAG +
Preference number: 2 (lower is better)
Translates to: HSPLRTILESHALQISDHKDPKS*SISFPQ
Trigger: CTGGGGAAAGGAGATGGAGCAGCTCTTGGGATCCTT...GTGGTCAGAGATCTGTAAAGCATGACTTTCAAGGATGGTTCTTAGGGGACTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
3UTR-3UTR TCA 90 bp TTAAGTAACAGGCATTTTATTGGGTGGCATCTGAGCAAATCCCATTGCCACCTCTGCTTTACAGATCTCTaGCCACTCAGAATCCAAGCA +
Preference number: 2 (lower is better)
Translates to: LSNRHFIGWHLSKSHCHLCFTDL*PLRIQA
Trigger: TGCTTGGATTCTGAGTGGTCAGAGATCTGTAAAGCA...GAGGTGGCAATGGGATTTGCTCAGATGCCACCCAATAAAATGCCTGTTACTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290597.9
ENST00000375341.8
3UTR CCA 72 bp AGCTGGCACCAGCACCCACCCCCATCCATGGGCCAGTaGCACTTGGGGAATGGCCACACCAGCTCCGGGTGG +
Preference number: 3 (lower is better)
Translates to: SWHQHPPPSMGQ*HLGNGHTSSGW
Trigger: CCACCCGGAGCTGGTGTGGCCATTCCCCAAGTGCCACTGGCCCATGGATGGGGGTGGGTGCTGGTGCCAGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
3UTR-3UTR CAA 90 bp ACCAGCACCCACCCCCATCCATGGGCCAGTGGCACTTGGGGAATGGCCACACCAATGGGCCAGTGGCACTaGGGGAATGGCCACACCAGC +
Preference number: 3 (lower is better)
Translates to: TSTHPHPWASGTWGMATPMGQWH*GNGHTS
Trigger: GCTGGTGTGGCCATTCCCCAAGTGCCACTGGCCCAT...TGGTGTGGCCATTCCCCAAGTGCCACTGGCCCATGGATGGGGGTGGGTGCTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
3UTR-3UTR CAA 90 bp GAATGGGCCAGTGAGGGACTGGTCCACACAGAGCCACTCCCAGGCAGAGGAGGAGGGCCAATGTCTGCCTaGGCCTGTGTCACCATGGCA +
Preference number: 3 (lower is better)
Translates to: EWASEGLVHTEPLPGRGGGPMSA*ACVTMA
Trigger: TGCCATGGTGACACAGGCCAAGGCAGACATTGGCCC...TCCTCCTCTGCCTGGGAGTGGCTCTGTGTGGACCAGTCCCTCACTGGCCCATTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
3UTR TCA 72 bp GGGGCAGGGATCAAGGCCAGGAGCCTCTGTGAGTGGTaGGGTTTGCCAAGGGGCCCAGAATGGCCTCCTTTT +
Preference number: 3 (lower is better)
Translates to: GAGIKARSLCEW*GLPRGPEWPPF
Trigger: AAAAGGAGGCCATTCTGGGCCCCTTGGCAAACCTCACCACTCACAGAGGCTCCTGGCCTTGATCCCTGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
3UTR GCA 72 bp CAGACCAGAGAGGGCAAGGCCAGCTGGTGCCCCCTGTaGCCCACAGGTCAGTCTGAGTTACACTTTACCCTG +
Preference number: 3 (lower is better)
Translates to: QTREGKASWCPL*PTGQSELHFTL
Trigger: CAGGGTAAAGTGTAACTCAGACTGACCTGTGGGGCACAGGGGGCACCAGCTGGCCTTGCCCTCTCTGGTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
3UTR GCA 72 bp GCCTGTGTCACCATGGCACAGTGGTGGCTGAGCTCCTaGAGGGAAATCCCAGACCCTGAGACTGGCTCTAGG +
Preference number: 3 (lower is better)
Translates to: ACVTMAQWWLSS*REIPDPETGSR
Trigger: CCTAGAGCCAGTCTCAGGGTCTGGGATTTCCCTGCAGGAGCTCAGCCACCACTGTGCCATGGTGACACAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
3UTR CCA 72 bp CCAATGTCTGCCTTGGCCTGTGTCACCATGGCACAGTaGTGGCTGAGCTCCTGCAGGGAAATCCCAGACCCT +
Preference number: 3 (lower is better)
Translates to: PMSALACVTMAQ*WLSSCREIPDP
Trigger: AGGGTCTGGGATTTCCCTGCAGGAGCTCAGCCACCACTGTGCCATGGTGACACAGGCCAAGGCAGACATTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
3UTR CCA 72 bp CGGGAATCACACAGGCCTCGGCCAAACACAGGCACCTaGAGTAAGGCATGCCAGCATCTAAGGTGTGTGGCT +
Preference number: 3 (lower is better)
Translates to: RESHRPRPNTGT*SKACQHLRCVA
Trigger: AGCCACACACCTTAGATGCTGGCATGCCTTACTCCAGGTGCCTGTGTTTGGCCGAGGCCTGTGTGATTCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
3UTR CCA 72 bp CCTCCCCAGCACGATCTCAAACCAGAGCCTGAGGCATaGGAGAGGCCAGAATACAGTGGTAAGAAGGGAGTC +
Preference number: 3 (lower is better)
Translates to: PPQHDLKPEPEA*ERPEYSGKKGV
Trigger: GACTCCCTTCTTACCACTGTATTCTGGCCTCTCCCATGCCTCAGGCTCTGGTTTGAGATCGTGCTGGGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
3UTR-3UTR CAA 90 bp GAAGGGAGGGCCAATGTCTGCCTTGGCCTGTGTCACCATGGCACAGTGGTGGCTTCTGAGCAAATCCCATaGCCACCTCACAGTGTAGAA +
Preference number: 3 (lower is better)
Translates to: EGRANVCLGLCHHGTVVASEQIP*PPHSVE
Trigger: TTCTACACTGTGAGGTGGCAATGGGATTTGCTCAGA...AGCCACCACTGTGCCATGGTGACACAGGCCAAGGCAGACATTGGCCCTCCCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
3UTR CCA 72 bp TCTCTGACCACTCAGAATCCAAGCAGGAGGCATCTGTaGGAGGAATCGTGGTCACAGATTGGCTGCGTCAAA +
Preference number: 3 (lower is better)
Translates to: SLTTQNPSRRHL*EESWSQIGCVK
Trigger: TTTGACGCAGCCAATCTGTGACCACGATTCCTCCCACAGATGCCTCCTGCTTGGATTCTGAGTGGTCAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
3UTR-3UTR CAA 90 bp CACAGTCCCCTAAGAACCATCCTTGAAAGTCATGCTTTACAGATCTCTGACCACTCTGAGCAAATCCCATaGCCACCTCACAGTGTAGAA +
Preference number: 3 (lower is better)
Translates to: HSPLRTILESHALQISDHSEQIP*PPHSVE
Trigger: TTCTACACTGTGAGGTGGCAATGGGATTTGCTCAGA...GTGGTCAGAGATCTGTAAAGCATGACTTTCAAGGATGGTTCTTAGGGGACTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR GCA 90 bp CCATGGGCCAGTGGCACTTGGGGAATGGCCACACCAGCTCCGGGTGGGGTCCCAGGCACGCTGATGGGCTaGTGCCCCTCCAGCTCCACC +
Preference number: 4 (lower is better)
Translates to: PWASGTWGMATPAPGGVPGTLMG*CPSSST
Trigger: GGTGGAGCTGGAGGGGCAGCAGCCCATCAGCGTGCC...TGGGACCCCACCCGGAGCTGGTGTGGCCATTCCCCAAGTGCCACTGGCCCATGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR GCA 90 bp GCACCAGCACCCACCCCCATCCATGGGCCAGTGGCACTTGGGGAATGGCCACACCCCCACCCAGCCACCTaGCCCGGCCCCTCATGGGAA +
Preference number: 4 (lower is better)
Translates to: APAPTPIHGPVALGEWPHPHPAT*PGPSWE
Trigger: TTCCCATGAGGGGCCGGGGCAGGTGGCTGGGTGGGG...GTGTGGCCATTCCCCAAGTGCCACTGGCCCATGGATGGGGGTGGGTGCTGGTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR GCA 90 bp AGCTGGCACCAGCACCCACCCCCATCCATGGGCCAGTGGCACTTGGGGAATGGCCCCCACCCAGCCACCTaGCCCGGCCCCTCATGGGAA +
Preference number: 4 (lower is better)
Translates to: SWHQHPPPSMGQWHLGNGPHPAT*PGPSWE
Trigger: TTCCCATGAGGGGCCGGGGCAGGTGGCTGGGTGGGG...GCCATTCCCCAAGTGCCACTGGCCCATGGATGGGGGTGGGTGCTGGTGCCAGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR GCA 90 bp CCATGGGCCAGTGGCACTTGGGGAATGGCCACACCAGCTCCGGGTGGGGTCCCAAGCCGCCCTTTGATCTaGGGCCACAGCGAGTGCGGC +
Preference number: 4 (lower is better)
Translates to: PWASGTWGMATPAPGGVPSRPLI*GHSECG
Trigger: GCCGCACTCGCTGTGGCCGCAGATCAAAGGGCGGCT...TGGGACCCCACCCGGAGCTGGTGTGGCCATTCCCCAAGTGCCACTGGCCCATGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp GCACCAGCACCCACCCCCATCCATGGGCCAGTGGCACTTGGGGAATGGCCACACCCAAGGCCAGGCCTCTaGGGGCTGGGAGAAGGGAGG +
Preference number: 4 (lower is better)
Translates to: APAPTPIHGPVALGEWPHPRPGL*GLGEGR
Trigger: CCTCCCTTCTCCCAGCCCCCAGAGGCCTGGCCTTGG...GTGTGGCCATTCCCCAAGTGCCACTGGCCCATGGATGGGGGTGGGTGCTGGTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR TCA 90 bp ATCCATGGGCCAGTGGCACTTGGGGAATGGCCACACCAGCTCCGGGTGGGGTCCCAGGGCTGCCCTGCGTaGAGGCTAAGACGGGCTCGT +
Preference number: 4 (lower is better)
Translates to: IHGPVALGEWPHQLRVGSQGCPA*RLRRAR
Trigger: ACGAGCCCGTCTTAGCCTTCACGCAGGGCAGCCCTG...GGACCCCACCCGGAGCTGGTGTGGCCATTCCCCAAGTGCCACTGGCCCATGGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR TCA 90 bp CAGTGGCACTTGGGGAATGGCCACACCAGCTCCGGGTGGGGTCCCATGCAGGCACCAGCAGCCGCCCTTTaGTCTGCGGCCACAGCGAGT +
Preference number: 4 (lower is better)
Translates to: QWHLGNGHTSSGWGPMQAPAAAL*SAATAS
Trigger: ACTCGCTGTGGCCGCAGATCAAAGGGCGGCTGCTGG...TGCCTGCATGGGACCCCACCCGGAGCTGGTGTGGCCATTCCCCAAGTGCCACTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR GCA 90 bp GCACCAGCACCCACCCCCATCCATGGGCCAGTGGCACTTGGGGAATGGCCACACACGCTGATGGGCTGCTaGCCCTCCAGCTCCACCGCA +
Preference number: 4 (lower is better)
Translates to: APAPTPIHGPVALGEWPHTLMGC*PSSSTA
Trigger: TGCGGTGGAGCTGGAGGGGCAGCAGCCCATCAGCGT...GTGTGGCCATTCCCCAAGTGCCACTGGCCCATGGATGGGGGTGGGTGCTGGTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR GCA 90 bp ATCCATGGGCCAGTGGCACTTGGGGAATGGCCACACCAGCTCCGGGTGGGGTCCGACCCCGGTACACCGTaGTGTTGGTGCTCGGGGGCA +
Preference number: 4 (lower is better)
Translates to: IHGPVALGEWPHQLRVGSDPGTP*CWCSGA
Trigger: TGCCCCCGAGCACCAACAGCACGGTGTACCGGGGTC...GGACCCCACCCGGAGCTGGTGTGGCCATTCCCCAAGTGCCACTGGCCCATGGAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp CCCACCCCCATCCATGGGCCAGTGGCACTTGGGGAATGGCCACACCAGCTCCGGATCCCCCACCACGCATaGGATGGCTTCCATCCGGCC +
Preference number: 4 (lower is better)
Translates to: PTPIHGPVALGEWPHQLRIPHHA*DGFHPA
Trigger: GGCCGGATGGAAGCCATCCCATGCGTGGTGGGGGAT...CCGGAGCTGGTGTGGCCATTCCCCAAGTGCCACTGGCCCATGGATGGGGGTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp CCCACCCCCATCCATGGGCCAGTGGCACTTGGGGAATGGCCACACCAGCTCCGGCCCCCAAAGGGCTGCTaGCCCACTATCGAGCCAGTG +
Preference number: 4 (lower is better)
Translates to: PTPIHGPVALGEWPHQLRPPKGC*PTIEPV
Trigger: CACTGGCTCGATAGTGGGCCAGCAGCCCTTTGGGGG...CCGGAGCTGGTGTGGCCATTCCCCAAGTGCCACTGGCCCATGGATGGGGGTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp AGCTGGCACCAGCACCCACCCCCATCCATGGGCCAGTGGCACTTGGGGAATGGCAGGTCCCTGAGCCACTaGGCCCAGTGGAGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: SWHQHPPPSMGQWHLGNGRSLSH*AQWRAE
Trigger: CTCTGCCCTCCACTGGGCCCAGTGGCTCAGGGACCT...GCCATTCCCCAAGTGCCACTGGCCCATGGATGGGGGTGGGTGCTGGTGCCAGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR TCA 90 bp CCAGCACCCACCCCCATCCATGGGCCAGTGGCACTTGGGGAATGGCCACACCAGAGAACACTGCCCCCGTaGGGCCATAGCTGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: PAPTPIHGPVALGEWPHQRTLPP*GHSWWC
Trigger: GCACCACCAGCTATGGCCTCACGGGGGCAGTGTTCT...CTGGTGTGGCCATTCCCCAAGTGCCACTGGCCCATGGATGGGGGTGGGTGCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR TCA 90 bp CCATGGGCCAGTGGCACTTGGGGAATGGCCACACCAGCTCCGGGTGGGGTCCCAAGCCTCTGTGAGTGGTaGGGTTTGCCAAGGGGCCCA +
Preference number: 4 (lower is better)
Translates to: PWASGTWGMATPAPGGVPSLCEW*GLPRGP
Trigger: TGGGCCCCTTGGCAAACCTCACCACTCACAGAGGCT...TGGGACCCCACCCGGAGCTGGTGTGGCCATTCCCCAAGTGCCACTGGCCCATGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR TCA 90 bp CCCACCCCCATCCATGGGCCAGTGGCACTTGGGGAATGGCCACACCAGCTCCGGTGGCACAGTGGTGGCTaGGCTCCTGCAGGGAAATCC +
Preference number: 4 (lower is better)
Translates to: PTPIHGPVALGEWPHQLRWHSGG*APAGKS
Trigger: GGATTTCCCTGCAGGAGCTCAGCCACCACTGTGCCA...CCGGAGCTGGTGTGGCCATTCCCCAAGTGCCACTGGCCCATGGATGGGGGTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR GCA 90 bp ACCAGCACCCACCCCCATCCATGGGCCAGTGGCACTTGGGGAATGGCCACACCAGACCCCGGTACACCGTaGTGTTGGTGCTCGGGGGCA +
Preference number: 4 (lower is better)
Translates to: TSTHPHPWASGTWGMATPDPGTP*CWCSGA
Trigger: TGCCCCCGAGCACCAACAGCACGGTGTACCGGGGTC...TGGTGTGGCCATTCCCCAAGTGCCACTGGCCCATGGATGGGGGTGGGTGCTGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR GCA 90 bp CCCACCCCCATCCATGGGCCAGTGGCACTTGGGGAATGGCCACACCAGCTCCGGGGCCATAGCTGGTGGTaGTGTCAACCAGCTGCAGCG +
Preference number: 4 (lower is better)
Translates to: PTPIHGPVALGEWPHQLRGHSWW*CQPAAA
Trigger: CGCTGCAGCTGGTTGACAGCACCACCAGCTATGGCC...CCGGAGCTGGTGTGGCCATTCCCCAAGTGCCACTGGCCCATGGATGGGGGTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR GCA 90 bp ATCCATGGGCCAGTGGCACTTGGGGAATGGCCACACCAGCTCCGGGTGGGGTCCGTCTCCTTGATGACCTaGGGCGACGTCCAGCGCAGG +
Preference number: 4 (lower is better)
Translates to: IHGPVALGEWPHQLRVGSVSLMT*GDVQRR
Trigger: CCTGCGCTGGACGTCGCCGCAGGTCATCAAGGAGAC...GGACCCCACCCGGAGCTGGTGTGGCCATTCCCCAAGTGCCACTGGCCCATGGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR GCA 90 bp ACCCACCCCCATCCATGGGCCAGTGGCACTTGGGGAATGGCCACACCAGCTCCGCCGGGTGGGGTCCCATaGAGGCATCCTGGAGGAAGA +
Preference number: 4 (lower is better)
Translates to: THPHPWASGTWGMATPAPPGGVP*RHPGGR
Trigger: TCTTCCTCCAGGATGCCTGCATGGGACCCCACCCGG...CGGAGCTGGTGTGGCCATTCCCCAAGTGCCACTGGCCCATGGATGGGGGTGGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR GCA 90 bp CAGTGGCACTTGGGGAATGGCCACACCAGCTCCGGGTGGGGTCCCATGCAGGCAGAATACTCCAGCCTGTaGCCCCACCCAGCCACCTGC +
Preference number: 4 (lower is better)
Translates to: QWHLGNGHTSSGWGPMQAEYSSL*PHPATC
Trigger: GCAGGTGGCTGGGTGGGGGCACAGGCTGGAGTATTC...TGCCTGCATGGGACCCCACCCGGAGCTGGTGTGGCCATTCCCCAAGTGCCACTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp CCAGCACCCACCCCCATCCATGGGCCAGTGGCACTTGGGGAATGGCCACACCAGGTGGCACTTGGGGAATaGCCACACCAGCTCCGGGTG +
Preference number: 4 (lower is better)
Translates to: PAPTPIHGPVALGEWPHQVALGE*PHQLRV
Trigger: CACCCGGAGCTGGTGTGGCCATTCCCCAAGTGCCAC...CTGGTGTGGCCATTCCCCAAGTGCCACTGGCCCATGGATGGGGGTGGGTGCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp AGCTGGCACCAGCACCCACCCCCATCCATGGGCCAGTGGCACTTGGGGAATGGCGTGGCACTTGGGGAATaGCCACACCAGCTCCGGGTG +
Preference number: 4 (lower is better)
Translates to: SWHQHPPPSMGQWHLGNGVALGE*PHQLRV
Trigger: CACCCGGAGCTGGTGTGGCCATTCCCCAAGTGCCAC...GCCATTCCCCAAGTGCCACTGGCCCATGGATGGGGGTGGGTGCTGGTGCCAGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp CCCACCCCCATCCATGGGCCAGTGGCACTTGGGGAATGGCCACACCAGCTCCGGTGGGCCAGTGGCACTTaGGGAATGGCCACACCAGCT +
Preference number: 4 (lower is better)
Translates to: PTPIHGPVALGEWPHQLRWASGT*GMATPA
Trigger: AGCTGGTGTGGCCATTCCCCAAGTGCCACTGGCCCA...CCGGAGCTGGTGTGGCCATTCCCCAAGTGCCACTGGCCCATGGATGGGGGTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp CCATGGGCCAGTGGCACTTGGGGAATGGCCACACCAGCTCCGGGTGGGGTCCCACCATCCATGGGCCAGTaGCACTTGGGGAATGGCCAC +
Preference number: 4 (lower is better)
Translates to: PWASGTWGMATPAPGGVPPSMGQ*HLGNGH
Trigger: GTGGCCATTCCCCAAGTGCCACTGGCCCATGGATGG...TGGGACCCCACCCGGAGCTGGTGTGGCCATTCCCCAAGTGCCACTGGCCCATGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp CCAGCACCCACCCCCATCCATGGGCCAGTGGCACTTGGGGAATGGCCACACCAGACCCACCCCCATCCATaGGCCAGTGGCACTTGGGGA +
Preference number: 4 (lower is better)
Translates to: PAPTPIHGPVALGEWPHQTHPHP*ASGTWG
Trigger: TCCCCAAGTGCCACTGGCCCATGGATGGGGGTGGGT...CTGGTGTGGCCATTCCCCAAGTGCCACTGGCCCATGGATGGGGGTGGGTGCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp CCAGCACCCACCCCCATCCATGGGCCAGTGGCACTTGGGGAATGGCCACACCAGGTGAGGTCGGCCACCTaGACGGACAGACAGCTGGAC +
Preference number: 4 (lower is better)
Translates to: PAPTPIHGPVALGEWPHQVRSAT*TDRQLD
Trigger: GTCCAGCTGTCTGTCCGTCCAGGTGGCCGACCTCAC...CTGGTGTGGCCATTCCCCAAGTGCCACTGGCCCATGGATGGGGGTGGGTGCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp GCCAGGCACCAGGGTCATACCTCCCACATGGCCGATGGGATAAGGGGTAGTGGCTCCCATCCCACGCCTTaGCAGGTGGCCTCCAGCGGC +
Preference number: 4 (lower is better)
Translates to: ARHQGHTSHMADGIRGSGSHPTP*QVASSG
Trigger: GCCGCTGGAGGCCACCTGCCAAGGCGTGGGATGGGA...GCCACTACCCCTTATCCCATCGGCCATGTGGGAGGTATGACCCTGGTGCCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp AGCTGGCACCAGCACCCACCCCCATCCATGGGCCAGTGGCACTTGGGGAATGGCGGGCCAGTGAGGGACTaGTCCACACAGAGCCACTCC +
Preference number: 4 (lower is better)
Translates to: SWHQHPPPSMGQWHLGNGGPVRD*STQSHS
Trigger: GGAGTGGCTCTGTGTGGACCAGTCCCTCACTGGCCC...GCCATTCCCCAAGTGCCACTGGCCCATGGATGGGGGTGGGTGCTGGTGCCAGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR TCA 90 bp GCCAGGCACCAGGGTCATACCTCCCACATGGCCGATGGGATAAGGGGTAGTGGCCAGGGCTGCCCTGCGTaGAGGCTAAGACGGGCTCGT +
Preference number: 4 (lower is better)
Translates to: ARHQGHTSHMADGIRGSGQGCPA*RLRRAR
Trigger: ACGAGCCCGTCTTAGCCTTCACGCAGGGCAGCCCTG...GCCACTACCCCTTATCCCATCGGCCATGTGGGAGGTATGACCCTGGTGCCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR TCA 90 bp GTGGGGTCCCATGCAGGCATCCTGGAGGAAGACCCAACACTTTCACAGTCCCCTTGCTCGGGGGCACGCTaGTGGGCTGCTGCCCCTCCA +
Preference number: 4 (lower is better)
Translates to: VGSHAGILEEDPTLSQSPCSGAR*WAAAPP
Trigger: TGGAGGGGCAGCAGCCCATCAGCGTGCCCCCGAGCA...AGGGGACTGTGAAAGTGTTGGGTCTTCCTCCAGGATGCCTGCATGGGACCCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR TCA 90 bp ACCCACCCCCATCCATGGGCCAGTGGCACTTGGGGAATGGCCACACCAGCTCCGCAGGGTCGCCCACTTTaGTCCGACTGTGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: THPHPWASGTWGMATPAPQGRPL*SDCAPP
Trigger: TGGAGGAGCACAGTCGGATCAAAGTGGGCGACCCTG...CGGAGCTGGTGTGGCCATTCCCCAAGTGCCACTGGCCCATGGATGGGGGTGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR GCA 90 bp ATCCATGGGCCAGTGGCACTTGGGGAATGGCCACACCAGCTCCGGGTGGGGTCCGGCGACACTTGGTACTaGACGTCCGACGTCCACACC +
Preference number: 4 (lower is better)
Translates to: IHGPVALGEWPHQLRVGSGDTWY*TSDVHT
Trigger: GGTGTGGACGTCGGACGTGCAGTACCAAGTGTCGCC...GGACCCCACCCGGAGCTGGTGTGGCCATTCCCCAAGTGCCACTGGCCCATGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp CCAGCACCCACCCCCATCCATGGGCCAGTGGCACTTGGGGAATGGCCACACCAGAGGCGTGGGAAGGTGTaGAACCGGTCCAGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: PAPTPIHGPVALGEWPHQRRGKV*NRSRFW
Trigger: CCAGAACCTGGACCGGTTCCACACCTTCCCACGCCT...CTGGTGTGGCCATTCCCCAAGTGCCACTGGCCCATGGATGGGGGTGGGTGCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp ACCAGCACCCACCCCCATCCATGGGCCAGTGGCACTTGGGGAATGGCCACACCACTCTCCAGCCAGGCGTaGGAAGGTGTGGAACCGGTC +
Preference number: 4 (lower is better)
Translates to: TSTHPHPWASGTWGMATPLSSQA*EGVEPV
Trigger: GACCGGTTCCACACCTTCCCACGCCTGGCTGGAGAG...TGGTGTGGCCATTCCCCAAGTGCCACTGGCCCATGGATGGGGGTGGGTGCTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp ACCAGCACCCACCCCCATCCATGGGCCAGTGGCACTTGGGGAATGGCCACACCACCCCTGGCTTGTCATTaGTTCCAGAGGCTCGGGCCC +
Preference number: 4 (lower is better)
Translates to: TSTHPHPWASGTWGMATPPLACH*FQRLGP
Trigger: GGGCCCGAGCCTCTGGAACCAATGACAAGCCAGGGG...TGGTGTGGCCATTCCCCAAGTGCCACTGGCCCATGGATGGGGGTGGGTGCTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp GCCAGGCACCAGGGTCATACCTCCCACATGGCCGATGGGATAAGGGGTAGTGGCCACACCAGCTCCGGGTaGGGTCCCATGCAGGCATCC +
Preference number: 4 (lower is better)
Translates to: ARHQGHTSHMADGIRGSGHTSSG*GPMQAS
Trigger: GGATGCCTGCATGGGACCCCACCCGGAGCTGGTGTG...GCCACTACCCCTTATCCCATCGGCCATGTGGGAGGTATGACCCTGGTGCCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp CAGTGGCACTTGGGGAATGGCCACACCAGCTCCGGGTGGGGTCCCATGCAGGCATGGGCCAGTGGCACTTaGGGAATGGCCACACCAGCT +
Preference number: 4 (lower is better)
Translates to: QWHLGNGHTSSGWGPMQAWASGT*GMATPA
Trigger: AGCTGGTGTGGCCATTCCCCAAGTGCCACTGGCCCA...TGCCTGCATGGGACCCCACCCGGAGCTGGTGTGGCCATTCCCCAAGTGCCACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp TGGCACCAGCACCCACCCCCATCCATGGGCCAGTGGCACTTGGGGAATGGCCACCCATCCATGGGCCAGTaGCACTTGGGGAATGGCCAC +
Preference number: 4 (lower is better)
Translates to: WHQHPPPSMGQWHLGNGHPSMGQ*HLGNGH
Trigger: GTGGCCATTCCCCAAGTGCCACTGGCCCATGGATGG...GTGGCCATTCCCCAAGTGCCACTGGCCCATGGATGGGGGTGGGTGCTGGTGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR TCA 90 bp ATGACACATATCCTGGAAGGACACAGAACCCACACCCAGCCCAGCTGGCACCAGTGCTCGGGGGCACGCTaGTGGGCTGCTGCCCCTCCA +
Preference number: 4 (lower is better)
Translates to: MTHILEGHRTHTQPSWHQCSGAR*WAAAPP
Trigger: TGGAGGGGCAGCAGCCCATCAGCGTGCCCCCGAGCA...CTGGTGCCAGCTGGGCTGGGTGTGGGTTCTGTGTCCTTCCAGGATATGTGTCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR TCA 90 bp AGCTGGCACCAGCACCCACCCCCATCCATGGGCCAGTGGCACTTGGGGAATGGCTTCATGATGGGCTCCTaGGGGTCCTTGCTCTCCACG +
Preference number: 4 (lower is better)
Translates to: SWHQHPPPSMGQWHLGNGFMMGS*GSLLST
Trigger: CGTGGAGAGCAAGGACCCTCAGGAGCCCATCATGAA...GCCATTCCCCAAGTGCCACTGGCCCATGGATGGGGGTGGGTGCTGGTGCCAGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000290597.9
ENST00000375341.8
CDS-3UTR TCA 90 bp GTGGGGTCCCATGCAGGCATCCTGGAGGAAGACCCAACACTTTCACAGTCCCCTGTCCTCGGCCCATGCTaGCGAACCCAAGGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: VGSHAGILEEDPTLSQSPVLGPC*RTQGQA
Trigger: GGCCTGGCCTTGGGTTCGTCAGCATGGGCCGAGGAC...AGGGGACTGTGAAAGTGTTGGGTCTTCCTCCAGGATGCCTGCATGGGACCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR GCA 90 bp CCCACCCCCATCCATGGGCCAGTGGCACTTGGGGAATGGCCACACCAGCTCCGGTCCTTCAAGGCCTTTTaGAGGGCATCTCGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: PTPIHGPVALGEWPHQLRSFKAF*RASRSG
Trigger: CCCTGAGCGAGATGCCCTGCAAAAGGCCTTGAAGGA...CCGGAGCTGGTGTGGCCATTCCCCAAGTGCCACTGGCCCATGGATGGGGGTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR GCA 90 bp CAAGCAGGAGGCATCTGGACGGACAGACAGCTGGACGGTGGAGCCCGAGAGGGGGATCTGGGCCCGGTCTaGAATAGGCTTCAGGTCCCA +
Preference number: 4 (lower is better)
Translates to: QAGGIWTDRQLDGGAREGDLGPV*NRLQVP
Trigger: TGGGACCTGAAGCCTATTGCAGACCGGGCCCAGATC...CCCCTCTCGGGCTCCACCGTCCAGCTGTCTGTCCGTCCAGATGCCTCCTGCTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290597.9
CDS-3UTR GCA 90 bp CCAGCACCCACCCCCATCCATGGGCCAGTGGCACTTGGGGAATGGCCACACCAGGATCTGGGCCCGGTCTaGAATAGGCTTCAGGTCCCA +
Preference number: 4 (lower is better)
Translates to: PAPTPIHGPVALGEWPHQDLGPV*NRLQVP
Trigger: TGGGACCTGAAGCCTATTGCAGACCGGGCCCAGATC...CTGGTGTGGCCATTCCCCAAGTGCCACTGGCCCATGGATGGGGGTGGGTGCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR GCA 90 bp GCCAGGCACCAGGGTCATACCTCCCACATGGCCGATGGGATAAGGGGTAGTGGCCGAGGATCTCAGCCCTaGGCGGCCCACTCAGCATGT +
Preference number: 4 (lower is better)
Translates to: ARHQGHTSHMADGIRGSGRGSQP*AAHSAC
Trigger: ACATGCTGAGTGGGCCGCGCAGGGCTGAGATCCTCG...GCCACTACCCCTTATCCCATCGGCCATGTGGGAGGTATGACCCTGGTGCCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR GCA 90 bp GTGGGGTCCCATGCAGGCATCCTGGAGGAAGACCCAACACTTTCACAGTCCCCTGGCACGCTGATGGGCTaGTGCCCCTCCAGCTCCACC +
Preference number: 4 (lower is better)
Translates to: VGSHAGILEEDPTLSQSPGTLMG*CPSSST
Trigger: GGTGGAGCTGGAGGGGCAGCAGCCCATCAGCGTGCC...AGGGGACTGTGAAAGTGTTGGGTCTTCCTCCAGGATGCCTGCATGGGACCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR GCA 90 bp CAAGCAGGAGGCATCTGGACGGACAGACAGCTGGACGGTGGAGCCCGAGAGGGGCAGCCTCCCGAAGGATaGGGTAGACAGCATAGCTGG +
Preference number: 4 (lower is better)
Translates to: QAGGIWTDRQLDGGAREGQPPEG*GRQHSW
Trigger: CCAGCTATGCTGTCTACCGCATCCTTCGGGAGGCTG...CCCCTCTCGGGCTCCACCGTCCAGCTGTCTGTCCGTCCAGATGCCTCCTGCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290597.9
CDS-3UTR GCA 90 bp ATCCATGGGCCAGTGGCACTTGGGGAATGGCCACACCAGCTCCGGGTGGGGTCCACTTTGATCCGACTGTaGTCCTCCAGCAGCCGCCCT +
Preference number: 4 (lower is better)
Translates to: IHGPVALGEWPHQLRVGSTLIRL*SSSSRP
Trigger: AGGGCGGCTGCTGGAGGAGCACAGTCGGATCAAAGT...GGACCCCACCCGGAGCTGGTGTGGCCATTCCCCAAGTGCCACTGGCCCATGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR GCA 90 bp CCCACCCCCATCCATGGGCCAGTGGCACTTGGGGAATGGCCACACCAGCTCCGGACCTTTGTGGCCTCCTaGACGACGTCCTTATCCTGG +
Preference number: 4 (lower is better)
Translates to: PTPIHGPVALGEWPHQLRTFVAS*TTSLSW
Trigger: CCAGGATAAGGACGTCGTGCAGGAGGCCACAAAGGT...CCGGAGCTGGTGTGGCCATTCCCCAAGTGCCACTGGCCCATGGATGGGGGTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR GCA 90 bp GGTCATACCTCCCACATGGCCGATGGGATAAGGGGTAGTGGCCATGTTCCTCCCGGCAAGGCCAGCTGGTaGCCCCTGTGCCCCACAGGT +
Preference number: 4 (lower is better)
Translates to: GHTSHMADGIRGSGHVPPGKASW*PLCPTG
Trigger: ACCTGTGGGGCACAGGGGGCACCAGCTGGCCTTGCC...GGGAGGAACATGGCCACTACCCCTTATCCCATCGGCCATGTGGGAGGTATGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp CAGTGGCACTTGGGGAATGGCCACACCAGCTCCGGGTGGGGTCCCATGCAGGCAGCCTTCAGGAAGATCTaGGCCCGGTCTGCAATAGGC +
Preference number: 4 (lower is better)
Translates to: QWHLGNGHTSSGWGPMQAAFRKI*ARSAIG
Trigger: GCCTATTGCAGACCGGGCCCAGATCTTCCTGAAGGC...TGCCTGCATGGGACCCCACCCGGAGCTGGTGTGGCCATTCCCCAAGTGCCACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp CAGTGGCACTTGGGGAATGGCCACACCAGCTCCGGGTGGGGTCCCATGCAGGCACATAGCTGGCCAGCATaGCAGTGTCACTGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: QWHLGNGHTSSGWGPMQAHSWPA*QCHWAS
Trigger: GGAAGCCCAGTGACACTGCCATGCTGGCCAGCTATG...TGCCTGCATGGGACCCCACCCGGAGCTGGTGTGGCCATTCCCCAAGTGCCACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp GCACCAGCACCCACCCCCATCCATGGGCCAGTGGCACTTGGGGAATGGCCACACGAGCGGTGCACGAAGTaGAAGTTCTTTCCGCCGCAC +
Preference number: 4 (lower is better)
Translates to: APAPTPIHGPVALGEWPHERCTK*KFFPPH
Trigger: GTGCGGCGGAAAGAACTTCCACTTCGTGCACCGCTC...GTGTGGCCATTCCCCAAGTGCCACTGGCCCATGGATGGGGGTGGGTGCTGGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp ACCCACCCCCATCCATGGGCCAGTGGCACTTGGGGAATGGCCACACCAGCTCCGTCCTCAGCACCTTTGTaGCCTCCTGCACGACGTCCT +
Preference number: 4 (lower is better)
Translates to: THPHPWASGTWGMATPAPSSAPL*PPARRP
Trigger: AGGACGTCGTGCAGGAGGCCACAAAGGTGCTGAGGA...CGGAGCTGGTGTGGCCATTCCCCAAGTGCCACTGGCCCATGGATGGGGGTGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp GAAGGGAGGGCCAATGTCTGCCTTGGCCTGTGTCACCATGGCACAGTGGTGGCTGGACGGACAGACAGCTaGACGGTGGAGCCCGAGAGG +
Preference number: 4 (lower is better)
Translates to: EGRANVCLGLCHHGTVVAGRTDS*TVEPER
Trigger: CCTCTCGGGCTCCACCGTCCAGCTGTCTGTCCGTCC...AGCCACCACTGTGCCATGGTGACACAGGCCAAGGCAGACATTGGCCCTCCCTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp GCCAGGCACCAGGGTCATACCTCCCACATGGCCGATGGGATAAGGGGTAGTGGCACCCACCCCCATCCATaGGCCAGTGGCACTTGGGGA +
Preference number: 4 (lower is better)
Translates to: ARHQGHTSHMADGIRGSGTHPHP*ASGTWG
Trigger: TCCCCAAGTGCCACTGGCCCATGGATGGGGGTGGGT...GCCACTACCCCTTATCCCATCGGCCATGTGGGAGGTATGACCCTGGTGCCTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp TGGCTGAGCTCCTGCAGGGAAATCCCAGACCCTGAGACTGGCTCTAGGAGTGGAGGGACAGGGGCCTACTaGCCCAGGTGGGTCTGGGCA +
Preference number: 4 (lower is better)
Translates to: WLSSCREIPDPETGSRSGGTGAY*PRWVWA
Trigger: TGCCCAGACCCACCTGGGCCAGTAGGCCCCTGTCCC...TCCACTCCTAGAGCCAGTCTCAGGGTCTGGGATTTCCCTGCAGGAGCTCAGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp ACCAGCACCCACCCCCATCCATGGGCCAGTGGCACTTGGGGAATGGCCACACCATCTAAGGTGTGTGGCTaGGGACAGGGGCCTACTGGC +
Preference number: 4 (lower is better)
Translates to: TSTHPHPWASGTWGMATPSKVCG*GQGPTG
Trigger: GCCAGTAGGCCCCTGTCCCCAGCCACACACCTTAGA...TGGTGTGGCCATTCCCCAAGTGCCACTGGCCCATGGATGGGGGTGGGTGCTGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp CAGTGGCACTTGGGGAATGGCCACACCAGCTCCGGGTGGGGTCCCATGCAGGCAGGCCAATGTCTGCCTTaGCCTGTGTCACCATGGCAC +
Preference number: 4 (lower is better)
Translates to: QWHLGNGHTSSGWGPMQAGQCLP*PVSPWH
Trigger: GTGCCATGGTGACACAGGCCAAGGCAGACATTGGCC...TGCCTGCATGGGACCCCACCCGGAGCTGGTGTGGCCATTCCCCAAGTGCCACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp AGCTGGCACCAGCACCCACCCCCATCCATGGGCCAGTGGCACTTGGGGAATGGCGGCCAATGTCTGCCTTaGCCTGTGTCACCATGGCAC +
Preference number: 4 (lower is better)
Translates to: SWHQHPPPSMGQWHLGNGGQCLP*PVSPWH
Trigger: GTGCCATGGTGACACAGGCCAAGGCAGACATTGGCC...GCCATTCCCCAAGTGCCACTGGCCCATGGATGGGGGTGGGTGCTGGTGCCAGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR TCA 90 bp GGTCCCATGCAGGCATCCTGGAGGAAGACCCAACACTTTCACAGTCCCCTAAGATGCTCGGGGGCACGCTaGTGGGCTGCTGCCCCTCCA +
Preference number: 4 (lower is better)
Translates to: GPMQASWRKTQHFHSPLRCSGAR*WAAAPP
Trigger: TGGAGGGGCAGCAGCCCATCAGCGTGCCCCCGAGCA...TCTTAGGGGACTGTGAAAGTGTTGGGTCTTCCTCCAGGATGCCTGCATGGGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR TCA 90 bp CCTACTGGCCCAGGTGGGTCTGGGCAAAGATACAGTGAGGAAGGTAGACAGCCCACCGTACTCGAAGGCTaGGCGGAGGGTCCCGCTCAC +
Preference number: 4 (lower is better)
Translates to: PTGPGGSGQRYSEEGRQPTVLEG*AEGPAH
Trigger: GTGAGCGGGACCCTCCGCTCAGCCTTCGAGTACGGT...GGGCTGTCTACCTTCCTCACTGTATCTTTGCCCAGACCCACCTGGGCCAGTAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR TCA 90 bp AGCTGGCACCAGCACCCACCCCCATCCATGGGCCAGTGGCACTTGGGGAATGGCAGATCTCCTCCTTCATaGTGGGCTCCTGAGGGTCCT +
Preference number: 4 (lower is better)
Translates to: SWHQHPPPSMGQWHLGNGRSPPS*WAPEGP
Trigger: AGGACCCTCAGGAGCCCATCATGAAGGAGGAGATCT...GCCATTCCCCAAGTGCCACTGGCCCATGGATGGGGGTGGGTGCTGGTGCCAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290597.9
ENST00000375341.8
CDS-3UTR TCA 90 bp CCCACCCCCATCCATGGGCCAGTGGCACTTGGGGAATGGCCACACCAGCTCCGGGCCCCTCATGGGAAATaGCACATATCCTGGAAGGAC +
Preference number: 4 (lower is better)
Translates to: PTPIHGPVALGEWPHQLRAPHGK*HISWKD
Trigger: GTCCTTCCAGGATATGTGTCATTTCCCATGAGGGGC...CCGGAGCTGGTGTGGCCATTCCCCAAGTGCCACTGGCCCATGGATGGGGGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR TCA 90 bp CCATGGGCCAGTGGCACTTGGGGAATGGCCACACCAGCTCCGGGTGGGGTCCCACCCCACAGGTCAGTCTaGGTTACACTTTACCCTGGA +
Preference number: 4 (lower is better)
Translates to: PWASGTWGMATPAPGGVPPHRSV*VTLYPG
Trigger: TCCAGGGTAAAGTGTAACTCAGACTGACCTGTGGGG...TGGGACCCCACCCGGAGCTGGTGTGGCCATTCCCCAAGTGCCACTGGCCCATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR GCA 90 bp GTGGGGTCCCATGCAGGCATCCTGGAGGAAGACCCAACACTTTCACAGTCCCCTCGCTCAGGGCTGCCCTaGGTGAAGGCTAAGACGGGC +
Preference number: 4 (lower is better)
Translates to: VGSHAGILEEDPTLSQSPRSGLP*VKAKTG
Trigger: GCCCGTCTTAGCCTTCACGCAGGGCAGCCCTGAGCG...AGGGGACTGTGAAAGTGTTGGGTCTTCCTCCAGGATGCCTGCATGGGACCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR GCA 90 bp TGGCTGAGCTCCTGCAGGGAAATCCCAGACCCTGAGACTGGCTCTAGGAGTGGACGCTCAGGGCTGCCCTaGGTGAAGGCTAAGACGGGC +
Preference number: 4 (lower is better)
Translates to: WLSSCREIPDPETGSRSGRSGLP*VKAKTG
Trigger: GCCCGTCTTAGCCTTCACGCAGGGCAGCCCTGAGCG...TCCACTCCTAGAGCCAGTCTCAGGGTCTGGGATTTCCCTGCAGGAGCTCAGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR GCA 90 bp CAGTGGCACTTGGGGAATGGCCACACCAGCTCCGGGTGGGGTCCCATGCAGGCACCCACTCAGCATGTCTaGCGCCTTCAGGAAGATCTG +
Preference number: 4 (lower is better)
Translates to: QWHLGNGHTSSGWGPMQAPTQHV*RLQEDL
Trigger: CAGATCTTCCTGAAGGCGGCAGACATGCTGAGTGGG...TGCCTGCATGGGACCCCACCCGGAGCTGGTGTGGCCATTCCCCAAGTGCCACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR GCA 90 bp CCATGGGCCAGTGGCACTTGGGGAATGGCCACACCAGCTCCGGGTGGGGTCCCAAGGTTCTGGGCCACCTaGTTCCACAGGTGTTTGAAG +
Preference number: 4 (lower is better)
Translates to: PWASGTWGMATPAPGGVPRFWAT*FHRCLK
Trigger: CTTCAAACACCTGTGGAAGCAGGTGGCCCAGAACCT...TGGGACCCCACCCGGAGCTGGTGTGGCCATTCCCCAAGTGCCACTGGCCCATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp GCCAGGCACCAGGGTCATACCTCCCACATGGCCGATGGGATAAGGGGTAGTGGCCCACCACGCATGGGATaGCTTCCATCCGGCCCTTCA +
Preference number: 4 (lower is better)
Translates to: ARHQGHTSHMADGIRGSGPPRMG*LPSGPS
Trigger: TGAAGGGCCGGATGGAAGCCATCCCATGCGTGGTGG...GCCACTACCCCTTATCCCATCGGCCATGTGGGAGGTATGACCCTGGTGCCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp CCAGCACCCACCCCCATCCATGGGCCAGTGGCACTTGGGGAATGGCCACACCAGTACCCTGTCCCACCATaGTCTTGGCGAGGATCTCAG +
Preference number: 4 (lower is better)
Translates to: PAPTPIHGPVALGEWPHQYPVPP*SWRGSQ
Trigger: CTGAGATCCTCGCCAAGACCATGGTGGGACAGGGTA...CTGGTGTGGCCATTCCCCAAGTGCCACTGGCCCATGGATGGGGGTGGGTGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp CAGTGGCACTTGGGGAATGGCCACACCAGCTCCGGGTGGGGTCCCATGCAGGCATACCCTGTCCCACCATaGTCTTGGCGAGGATCTCAG +
Preference number: 4 (lower is better)
Translates to: QWHLGNGHTSSGWGPMQAYPVPP*SWRGSQ
Trigger: CTGAGATCCTCGCCAAGACCATGGTGGGACAGGGTA...TGCCTGCATGGGACCCCACCCGGAGCTGGTGTGGCCATTCCCCAAGTGCCACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp CAAGCAGGAGGCATCTGGACGGACAGACAGCTGGACGGTGGAGCCCGAGAGGGGGCATGGCAGTGTCACTaGGCTTCCATAGGACCACGT +
Preference number: 4 (lower is better)
Translates to: QAGGIWTDRQLDGGAREGAWQCH*ASIGPR
Trigger: ACGTGGTCCTATGGAAGCCCAGTGACACTGCCATGC...CCCCTCTCGGGCTCCACCGTCCAGCTGTCTGTCCGTCCAGATGCCTCCTGCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290597.9
CDS-3UTR CCA 90 bp ACCCACCCCCATCCATGGGCCAGTGGCACTTGGGGAATGGCCACACCAGCTCCGGTAGTGTGGGCCCCCTaGCTTGTCATTGGTTCCAGA +
Preference number: 4 (lower is better)
Translates to: THPHPWASGTWGMATPAPVVWAP*LVIGSR
Trigger: TCTGGAACCAATGACAAGCCAGGGGGCCCACACTAC...CGGAGCTGGTGTGGCCATTCCCCAAGTGCCACTGGCCCATGGATGGGGGTGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp CCTACTGGCCCAGGTGGGTCTGGGCAAAGATACAGTGAGGAAGGTAGACAGCCCCACACCAGCTCCGGGTaGGGTCCCATGCAGGCATCC +
Preference number: 4 (lower is better)
Translates to: PTGPGGSGQRYSEEGRQPHTSSG*GPMQAS
Trigger: GGATGCCTGCATGGGACCCCACCCGGAGCTGGTGTG...GGGCTGTCTACCTTCCTCACTGTATCTTTGCCCAGACCCACCTGGGCCAGTAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp ACCCACCCCCATCCATGGGCCAGTGGCACTTGGGGAATGGCCACACCAGCTCCGTGCCCCGGCCCCTCATaGGAAATGACACATATCCTG +
Preference number: 4 (lower is better)
Translates to: THPHPWASGTWGMATPAPCPGPS*EMTHIL
Trigger: CAGGATATGTGTCATTTCCCATGAGGGGCCGGGGCA...CGGAGCTGGTGTGGCCATTCCCCAAGTGCCACTGGCCCATGGATGGGGGTGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp CAGTGGCACTTGGGGAATGGCCACACCAGCTCCGGGTGGGGTCCCATGCAGGCACCAGAGCCTGAGGCATaGGAGAGGCCAGAATACAGT +
Preference number: 4 (lower is better)
Translates to: QWHLGNGHTSSGWGPMQAPEPEA*ERPEYS
Trigger: ACTGTATTCTGGCCTCTCCCATGCCTCAGGCTCTGG...TGCCTGCATGGGACCCCACCCGGAGCTGGTGTGGCCATTCCCCAAGTGCCACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp TGGGGTCCCATGCAGGCATCCTGGAGGAAGACCCAACACTTTCACAGTCCCCTACCAAGGCCAGGCCTCTaGGGGCTGGGAGAAGGGAGG +
Preference number: 4 (lower is better)
Translates to: WGPMQASWRKTQHFHSPLPRPGL*GLGEGR
Trigger: CCTCCCTTCTCCCAGCCCCCAGAGGCCTGGCCTTGG...TAGGGGACTGTGAAAGTGTTGGGTCTTCCTCCAGGATGCCTGCATGGGACCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR TCA 90 bp TGGGGTCCCATGCAGGCATCCTGGAGGAAGACCCAACACTTTCACAGTCCCCTACAGGGCTGCCCTGCGTaGAGGCTAAGACGGGCTCGT +
Preference number: 4 (lower is better)
Translates to: WGPMQASWRKTQHFHSPLQGCPA*RLRRAR
Trigger: ACGAGCCCGTCTTAGCCTTCACGCAGGGCAGCCCTG...TAGGGGACTGTGAAAGTGTTGGGTCTTCCTCCAGGATGCCTGCATGGGACCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR TCA 90 bp ACCAGCACCCACCCCCATCCATGGGCCAGTGGCACTTGGGGAATGGCCACACCAACCGGAAGAAGTCGATaGGTTCCGCTGCAGCGTCAA +
Preference number: 4 (lower is better)
Translates to: TSTHPHPWASGTWGMATPTGRSR*VPLQRQ
Trigger: TTGACGCTGCAGCGGAACTCATCGACTTCTTCCGGT...TGGTGTGGCCATTCCCCAAGTGCCACTGGCCCATGGATGGGGGTGGGTGCTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR TCA 90 bp TGGGGTCCCATGCAGGCATCCTGGAGGAAGACCCAACACTTTCACAGTCCCCTAACCGTACTCGAAGGCTaGGCGGAGGGTCCCGCTCAC +
Preference number: 4 (lower is better)
Translates to: WGPMQASWRKTQHFHSPLTVLEG*AEGPAH
Trigger: GTGAGCGGGACCCTCCGCTCAGCCTTCGAGTACGGT...TAGGGGACTGTGAAAGTGTTGGGTCTTCCTCCAGGATGCCTGCATGGGACCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR TCA 90 bp ATGACACATATCCTGGAAGGACACAGAACCCACACCCAGCCCAGCTGGCACCAGGATGGTGAGGCTGGGTaGGGAGCGTGCGTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: MTHILEGHRTHTQPSWHQDGEAG*GACVLQ
Trigger: CTGGAGCACGCACGCTCCTCACCCAGCCTCACCATC...CTGGTGCCAGCTGGGCTGGGTGTGGGTTCTGTGTCCTTCCAGGATATGTGTCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290597.9
ENST00000375341.8
CDS-3UTR TCA 90 bp CAGTGGCACTTGGGGAATGGCCACACCAGCTCCGGGTGGGGTCCCATGCAGGCACAGTGGACTTGTCGTTaGTGTAGAAGTTGCCGGCAG +
Preference number: 4 (lower is better)
Translates to: QWHLGNGHTSSGWGPMQAQWTCR*CRSCRQ
Trigger: CTGCCGGCAACTTCTACATCAACGACAAGTCCACTG...TGCCTGCATGGGACCCCACCCGGAGCTGGTGTGGCCATTCCCCAAGTGCCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR TCA 90 bp CAGTGGCACTTGGGGAATGGCCACACCAGCTCCGGGTGGGGTCCCATGCAGGCAGCCCCTCATGGGAAATaGCACATATCCTGGAAGGAC +
Preference number: 4 (lower is better)
Translates to: QWHLGNGHTSSGWGPMQAAPHGK*HISWKD
Trigger: GTCCTTCCAGGATATGTGTCATTTCCCATGAGGGGC...TGCCTGCATGGGACCCCACCCGGAGCTGGTGTGGCCATTCCCCAAGTGCCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR TCA 90 bp GGTCCCATGCAGGCATCCTGGAGGAAGACCCAACACTTTCACAGTCCCCTAAGAGTCCTCGGCCCATGCTaGCGAACCCAAGGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: GPMQASWRKTQHFHSPLRVLGPC*RTQGQA
Trigger: GGCCTGGCCTTGGGTTCGTCAGCATGGGCCGAGGAC...TCTTAGGGGACTGTGAAAGTGTTGGGTCTTCCTCCAGGATGCCTGCATGGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR GCA 90 bp ATGACACATATCCTGGAAGGACACAGAACCCACACCCAGCCCAGCTGGCACCAGACGCTGATGGGCTGCTaGCCCTCCAGCTCCACCGCA +
Preference number: 4 (lower is better)
Translates to: MTHILEGHRTHTQPSWHQTLMGC*PSSSTA
Trigger: TGCGGTGGAGCTGGAGGGGCAGCAGCCCATCAGCGT...CTGGTGCCAGCTGGGCTGGGTGTGGGTTCTGTGTCCTTCCAGGATATGTGTCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR GCA 90 bp ACCCACCCCCATCCATGGGCCAGTGGCACTTGGGGAATGGCCACACCAGCTCCGCAGGTTGCCGCCGATTaGAGTGAAGTTAAAGGGCGA +
Preference number: 4 (lower is better)
Translates to: THPHPWASGTWGMATPAPQVAAD*SEVKGR
Trigger: TCGCCCTTTAACTTCACTGCAATCGGCGGCAACCTG...CGGAGCTGGTGTGGCCATTCCCCAAGTGCCACTGGCCCATGGATGGGGGTGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR GCA 90 bp CCAGCACCCACCCCCATCCATGGGCCAGTGGCACTTGGGGAATGGCCACACCAGCAGGTTGCCGCCGATTaGAGTGAAGTTAAAGGGCGA +
Preference number: 4 (lower is better)
Translates to: PAPTPIHGPVALGEWPHQQVAAD*SEVKGR
Trigger: TCGCCCTTTAACTTCACTGCAATCGGCGGCAACCTG...CTGGTGTGGCCATTCCCCAAGTGCCACTGGCCCATGGATGGGGGTGGGTGCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR GCA 90 bp AGCTGGCACCAGCACCCACCCCCATCCATGGGCCAGTGGCACTTGGGGAATGGCAGGTTCTGGGCCACCTaGTTCCACAGGTGTTTGAAG +
Preference number: 4 (lower is better)
Translates to: SWHQHPPPSMGQWHLGNGRFWAT*FHRCLK
Trigger: CTTCAAACACCTGTGGAAGCAGGTGGCCCAGAACCT...GCCATTCCCCAAGTGCCACTGGCCCATGGATGGGGGTGGGTGCTGGTGCCAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR GCA 90 bp ATGACACATATCCTGGAAGGACACAGAACCCACACCCAGCCCAGCTGGCACCAGAGCCGCCCTTTGATCTaGGGCCACAGCGAGTGCGGC +
Preference number: 4 (lower is better)
Translates to: MTHILEGHRTHTQPSWHQSRPLI*GHSECG
Trigger: GCCGCACTCGCTGTGGCCGCAGATCAAAGGGCGGCT...CTGGTGCCAGCTGGGCTGGGTGTGGGTTCTGTGTCCTTCCAGGATATGTGTCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR GCA 90 bp TGGCTGAGCTCCTGCAGGGAAATCCCAGACCCTGAGACTGGCTCTAGGAGTGGACTGGAGTGGGGTCTGTaGAGTGAGGTCGGCCACCTG +
Preference number: 4 (lower is better)
Translates to: WLSSCREIPDPETGSRSGLEWGL*SEVGHL
Trigger: CAGGTGGCCGACCTCACTGCACAGACCCCACTCCAG...TCCACTCCTAGAGCCAGTCTCAGGGTCTGGGATTTCCCTGCAGGAGCTCAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR GCA 90 bp TCTGGGCAAAGATACAGTGAGGAAGGTAGACAGCCCAGACCAGAGAGGGCAAGGGGCAAGGCCAGCTGGTaGCCCCTGTGCCCCACAGGT +
Preference number: 4 (lower is better)
Translates to: SGQRYSEEGRQPRPERARGKASW*PLCPTG
Trigger: ACCTGTGGGGCACAGGGGGCACCAGCTGGCCTTGCC...CCTTGCCCTCTCTGGTCTGGGCTGTCTACCTTCCTCACTGTATCTTTGCCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR GCA 90 bp GCCAGGCACCAGGGTCATACCTCCCACATGGCCGATGGGATAAGGGGTAGTGGCGGGAGGGCCAATGTCTaGCTTGGCCTGTGTCACCAT +
Preference number: 4 (lower is better)
Translates to: ARHQGHTSHMADGIRGSGGRANV*LGLCHH
Trigger: ATGGTGACACAGGCCAAGGCAGACATTGGCCCTCCC...GCCACTACCCCTTATCCCATCGGCCATGTGGGAGGTATGACCCTGGTGCCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp ACCAGCACCCACCCCCATCCATGGGCCAGTGGCACTTGGGGAATGGCCACACCAGTAGTGTGGGCCCCCTaGCTTGTCATTGGTTCCAGA +
Preference number: 4 (lower is better)
Translates to: TSTHPHPWASGTWGMATPVVWAP*LVIGSR
Trigger: TCTGGAACCAATGACAAGCCAGGGGGCCCACACTAC...TGGTGTGGCCATTCCCCAAGTGCCACTGGCCCATGGATGGGGGTGGGTGCTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp GCACCAGCACCCACCCCCATCCATGGGCCAGTGGCACTTGGGGAATGGCCACACCCCATGCAGGCATCCTaGAGGAAGACCCAACACTTT +
Preference number: 4 (lower is better)
Translates to: APAPTPIHGPVALGEWPHPMQAS*RKTQHF
Trigger: AAAGTGTTGGGTCTTCCTCCAGGATGCCTGCATGGG...GTGTGGCCATTCCCCAAGTGCCACTGGCCCATGGATGGGGGTGGGTGCTGGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp AGCTGGCACCAGCACCCACCCCCATCCATGGGCCAGTGGCACTTGGGGAATGGCCCAAACACAGGCACCTaGAGTAAGGCATGCCAGCAT +
Preference number: 4 (lower is better)
Translates to: SWHQHPPPSMGQWHLGNGPNTGT*SKACQH
Trigger: ATGCTGGCATGCCTTACTCCAGGTGCCTGTGTTTGG...GCCATTCCCCAAGTGCCACTGGCCCATGGATGGGGGTGGGTGCTGGTGCCAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp GAAGGGAGGGCCAATGTCTGCCTTGGCCTGTGTCACCATGGCACAGTGGTGGCTCCCAACCCCGCCATGTaGTGCAGACCGGGAATCACA +
Preference number: 4 (lower is better)
Translates to: EGRANVCLGLCHHGTVVAPNPAM*CRPGIT
Trigger: TGTGATTCCCGGTCTGCACCACATGGCGGGGTTGGG...AGCCACCACTGTGCCATGGTGACACAGGCCAAGGCAGACATTGGCCCTCCCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp GAATGGGCCAGTGAGGGACTGGTCCACACAGAGCCACTCCCAGGCAGAGGAGGAACCATGGCACAGTGGTaGCTGAGCTCCTGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: EWASEGLVHTEPLPGRGGTMAQW*LSSCRE
Trigger: TTCCCTGCAGGAGCTCAGCCACCACTGTGCCATGGT...TCCTCCTCTGCCTGGGAGTGGCTCTGTGTGGACCAGTCCCTCACTGGCCCATTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp ACCAGCACCCACCCCCATCCATGGGCCAGTGGCACTTGGGGAATGGCCACACCACTGTGGGAGGAATCGTaGTCACAGATTGGCTGCGTC +
Preference number: 4 (lower is better)
Translates to: TSTHPHPWASGTWGMATPLWEES*SQIGCV
Trigger: GACGCAGCCAATCTGTGACCACGATTCCTCCCACAG...TGGTGTGGCCATTCCCCAAGTGCCACTGGCCCATGGATGGGGGTGGGTGCTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR TCA 90 bp GAATGGGCCAGTGAGGGACTGGTCCACACAGAGCCACTCCCAGGCAGAGGAGGAACCGGAAGAAGTCGATaGGTTCCGCTGCAGCGTCAA +
Preference number: 4 (lower is better)
Translates to: EWASEGLVHTEPLPGRGGTGRSR*VPLQRQ
Trigger: TTGACGCTGCAGCGGAACTCATCGACTTCTTCCGGT...TCCTCCTCTGCCTGGGAGTGGCTCTGTGTGGACCAGTCCCTCACTGGCCCATTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR TCA 90 bp AATGACACATATCCTGGAAGGACACAGAACCCACACCCAGCCCAGCTGGCACCACCAGCAGCCGCCCTTTaGTCTGCGGCCACAGCGAGT +
Preference number: 4 (lower is better)
Translates to: NDTYPGRTQNPHPAQLAPPAAAL*SAATAS
Trigger: ACTCGCTGTGGCCGCAGATCAAAGGGCGGCTGCTGG...TGGTGCCAGCTGGGCTGGGTGTGGGTTCTGTGTCCTTCCAGGATATGTGTCATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR TCA 90 bp TCTCTGACCACTCAGAATCCAAGCAGGAGGCATCTGGACGGACAGACAGCTGGAGATGGTGAGGCTGGGTaGGGAGCGTGCGTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: SLTTQNPSRRHLDGQTAGDGEAG*GACVLQ
Trigger: CTGGAGCACGCACGCTCCTCACCCAGCCTCACCATC...TCCAGCTGTCTGTCCGTCCAGATGCCTCCTGCTTGGATTCTGAGTGGTCAGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290597.9
CDS-3UTR TCA 90 bp CACAGTGTAGAACCAGTAGAACTAAGAATACTCCAGCCTGTGCCCCCACCCAGCGTGGGGTCTGTGCAGTaGGGTCGGCCACCTGGACGG +
Preference number: 4 (lower is better)
Translates to: HSVEPVELRILQPVPPPSVGSVQ*GRPPGR
Trigger: CCGTCCAGGTGGCCGACCTCACTGCACAGACCCCAC...GCTGGGTGGGGGCACAGGCTGGAGTATTCTTAGTTCTACTGGTTCTACACTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR GCA 90 bp TGGGGTCCCATGCAGGCATCCTGGAGGAAGACCCAACACTTTCACAGTCCCCTACGAGGATCTCAGCCCTaGGCGGCCCACTCAGCATGT +
Preference number: 4 (lower is better)
Translates to: WGPMQASWRKTQHFHSPLRGSQP*AAHSAC
Trigger: ACATGCTGAGTGGGCCGCGCAGGGCTGAGATCCTCG...TAGGGGACTGTGAAAGTGTTGGGTCTTCCTCCAGGATGCCTGCATGGGACCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR GCA 90 bp ACCAGCACCCACCCCCATCCATGGGCCAGTGGCACTTGGGGAATGGCCACACCATTGATGCCACAGAGGTaGTCTGAGCTGGTGACAGTG +
Preference number: 4 (lower is better)
Translates to: TSTHPHPWASGTWGMATPLMPQR*SELVTV
Trigger: CACTGTCACCAGCTCAGAGCACCTCTGTGGCATCAA...TGGTGTGGCCATTCCCCAAGTGCCACTGGCCCATGGATGGGGGTGGGTGCTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR GCA 90 bp TGGCTGAGCTCCTGCAGGGAAATCCCAGACCCTGAGACTGGCTCTAGGAGTGGAGGCAGAGGGAGAACCTaGCAGGCACCAGGGTCATAC +
Preference number: 4 (lower is better)
Translates to: WLSSCREIPDPETGSRSGGRGRT*QAPGSY
Trigger: GTATGACCCTGGTGCCTGGCAGGTTCTCCCTCTGCC...TCCACTCCTAGAGCCAGTCTCAGGGTCTGGGATTTCCCTGCAGGAGCTCAGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR GCA 90 bp GAAGGGAGGGCCAATGTCTGCCTTGGCCTGTGTCACCATGGCACAGTGGTGGCTGGGAGGGCCAATGTCTaGCTTGGCCTGTGTCACCAT +
Preference number: 4 (lower is better)
Translates to: EGRANVCLGLCHHGTVVAGRANV*LGLCHH
Trigger: ATGGTGACACAGGCCAAGGCAGACATTGGCCCTCCC...AGCCACCACTGTGCCATGGTGACACAGGCCAAGGCAGACATTGGCCCTCCCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp TGGCTGAGCTCCTGCAGGGAAATCCCAGACCCTGAGACTGGCTCTAGGAGTGGACCACCACGCATGGGATaGCTTCCATCCGGCCCTTCA +
Preference number: 4 (lower is better)
Translates to: WLSSCREIPDPETGSRSGPPRMG*LPSGPS
Trigger: TGAAGGGCCGGATGGAAGCCATCCCATGCGTGGTGG...TCCACTCCTAGAGCCAGTCTCAGGGTCTGGGATTTCCCTGCAGGAGCTCAGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp CCCACCCCCATCCATGGGCCAGTGGCACTTGGGGAATGGCCACACCAGCTCCGGGCCACCTTATGTCCATaGTTAAAAGGCGACACTTGG +
Preference number: 4 (lower is better)
Translates to: PTPIHGPVALGEWPHQLRATLCP*LKGDTW
Trigger: CCAAGTGTCGCCTTTTAACCATGGACATAAGGTGGC...CCGGAGCTGGTGTGGCCATTCCCCAAGTGCCACTGGCCCATGGATGGGGGTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp CAGAATCCAAGCAGGAGGCATCTGTGGGAGGAATCGTGGTCACAGATTGGCTGCCAGACAGCTGGACGGTaGAGCCCGAGAGGGGCTCAC +
Preference number: 4 (lower is better)
Translates to: QNPSRRHLWEESWSQIGCQTAGR*SPRGAH
Trigger: GTGAGCCCCTCTCGGGCTCCACCGTCCAGCTGTCTG...GCAGCCAATCTGTGACCACGATTCCTCCCACAGATGCCTCCTGCTTGGATTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp GGTCCCATGCAGGCATCCTGGAGGAAGACCCAACACTTTCACAGTCCCCTAAGACAGACAGCTGGACGGTaGAGCCCGAGAGGGGCTCAC +
Preference number: 4 (lower is better)
Translates to: GPMQASWRKTQHFHSPLRQTAGR*SPRGAH
Trigger: GTGAGCCCCTCTCGGGCTCCACCGTCCAGCTGTCTG...TCTTAGGGGACTGTGAAAGTGTTGGGTCTTCCTCCAGGATGCCTGCATGGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp ATCTCTGACCACTCAGAATCCAAGCAGGAGGCATCTGGACGGACAGACAGCTGGCACACCAGCTCCGGGTaGGGTCCCATGCAGGCATCC +
Preference number: 4 (lower is better)
Translates to: ISDHSESKQEASGRTDSWHTSSG*GPMQAS
Trigger: GGATGCCTGCATGGGACCCCACCCGGAGCTGGTGTG...CCAGCTGTCTGTCCGTCCAGATGCCTCCTGCTTGGATTCTGAGTGGTCAGAGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290597.9
CDS-3UTR CCA 90 bp CAGAATCCAAGCAGGAGGCATCTGTGGGAGGAATCGTGGTCACAGATTGGCTGCAGGTCCCTGAGCCACTaGGCCCAGTGGAGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: QNPSRRHLWEESWSQIGCRSLSH*AQWRAE
Trigger: CTCTGCCCTCCACTGGGCCCAGTGGCTCAGGGACCT...GCAGCCAATCTGTGACCACGATTCCTCCCACAGATGCCTCCTGCTTGGATTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp CACAGTGTAGAACCAGTAGAACTAAGAATACTCCAGCCTGTGCCCCCACCCAGCTCCCATCCCACGCCTTaGCAGGTGGCCTCCAGCGGC +
Preference number: 4 (lower is better)
Translates to: HSVEPVELRILQPVPPPSSHPTP*QVASSG
Trigger: GCCGCTGGAGGCCACCTGCCAAGGCGTGGGATGGGA...GCTGGGTGGGGGCACAGGCTGGAGTATTCTTAGTTCTACTGGTTCTACACTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR TCA 90 bp CAGTGTAGAACCAGTAGAACTAAGAATACTCCAGCCTGTGCCCCCACCCAGCCAACCGTACTCGAAGGCTaGGCGGAGGGTCCCGCTCAC +
Preference number: 4 (lower is better)
Translates to: QCRTSRTKNTPACAPTQPTVLEG*AEGPAH
Trigger: GTGAGCGGGACCCTCCGCTCAGCCTTCGAGTACGGT...TGGCTGGGTGGGGGCACAGGCTGGAGTATTCTTAGTTCTACTGGTTCTACACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR TCA 90 bp CCCACCCCCATCCATGGGCCAGTGGCACTTGGGGAATGGCCACACCAGCTCCGGTGCTTTACAGATCTCTaGCCACTCAGAATCCAAGCA +
Preference number: 4 (lower is better)
Translates to: PTPIHGPVALGEWPHQLRCFTDL*PLRIQA
Trigger: TGCTTGGATTCTGAGTGGTCAGAGATCTGTAAAGCA...CCGGAGCTGGTGTGGCCATTCCCCAAGTGCCACTGGCCCATGGATGGGGGTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR TCA 90 bp ACCAGCACCCACCCCCATCCATGGGCCAGTGGCACTTGGGGAATGGCCACACCATTATTGGGTGGCATCTaGGCAAATCCCATTGCCACC +
Preference number: 4 (lower is better)
Translates to: TSTHPHPWASGTWGMATPLLGGI*ANPIAT
Trigger: GGTGGCAATGGGATTTGCTCAGATGCCACCCAATAA...TGGTGTGGCCATTCCCCAAGTGCCACTGGCCCATGGATGGGGGTGGGTGCTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR TCA 90 bp TGGGGTCCCATGCAGGCATCCTGGAGGAAGACCCAACACTTTCACAGTCCCCTATGGCACAGTGGTGGCTaGGCTCCTGCAGGGAAATCC +
Preference number: 4 (lower is better)
Translates to: WGPMQASWRKTQHFHSPLWHSGG*APAGKS
Trigger: GGATTTCCCTGCAGGAGCTCAGCCACCACTGTGCCA...TAGGGGACTGTGAAAGTGTTGGGTCTTCCTCCAGGATGCCTGCATGGGACCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR GCA 90 bp TCTGGGCAAAGATACAGTGAGGAAGGTAGACAGCCCAGACCAGAGAGGGCAAGGGTCTCCTTGATGACCTaGGGCGACGTCCAGCGCAGG +
Preference number: 4 (lower is better)
Translates to: SGQRYSEEGRQPRPERARVSLMT*GDVQRR
Trigger: CCTGCGCTGGACGTCGCCGCAGGTCATCAAGGAGAC...CCTTGCCCTCTCTGGTCTGGGCTGTCTACCTTCCTCACTGTATCTTTGCCCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR GCA 90 bp ACCAGCACCCACCCCCATCCATGGGCCAGTGGCACTTGGGGAATGGCCACACCAACCTGGAGTAAGGCATaGCAGCATCTAAGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: TSTHPHPWASGTWGMATPTWSKA*QHLRCV
Trigger: CACACACCTTAGATGCTGGCATGCCTTACTCCAGGT...TGGTGTGGCCATTCCCCAAGTGCCACTGGCCCATGGATGGGGGTGGGTGCTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp ATGACACATATCCTGGAAGGACACAGAACCCACACCCAGCCCAGCTGGCACCAGCCACCACGCATGGGATaGCTTCCATCCGGCCCTTCA +
Preference number: 4 (lower is better)
Translates to: MTHILEGHRTHTQPSWHQPPRMG*LPSGPS
Trigger: TGAAGGGCCGGATGGAAGCCATCCCATGCGTGGTGG...CTGGTGCCAGCTGGGCTGGGTGTGGGTTCTGTGTCCTTCCAGGATATGTGTCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp CCTACTGGCCCAGGTGGGTCTGGGCAAAGATACAGTGAGGAAGGTAGACAGCCCGCCTTCAGGAAGATCTaGGCCCGGTCTGCAATAGGC +
Preference number: 4 (lower is better)
Translates to: PTGPGGSGQRYSEEGRQPAFRKI*ARSAIG
Trigger: GCCTATTGCAGACCGGGCCCAGATCTTCCTGAAGGC...GGGCTGTCTACCTTCCTCACTGTATCTTTGCCCAGACCCACCTGGGCCAGTAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp GAAGGGAGGGCCAATGTCTGCCTTGGCCTGTGTCACCATGGCACAGTGGTGGCTGCATGGCAGTGTCACTaGGCTTCCATAGGACCACGT +
Preference number: 4 (lower is better)
Translates to: EGRANVCLGLCHHGTVVAAWQCH*ASIGPR
Trigger: ACGTGGTCCTATGGAAGCCCAGTGACACTGCCATGC...AGCCACCACTGTGCCATGGTGACACAGGCCAAGGCAGACATTGGCCCTCCCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp GTGGGGTCCCATGCAGGCATCCTGGAGGAAGACCCAACACTTTCACAGTCCCCTCATAGCTGGCCAGCATaGCAGTGTCACTGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: VGSHAGILEEDPTLSQSPHSWPA*QCHWAS
Trigger: GGAAGCCCAGTGACACTGCCATGCTGGCCAGCTATG...AGGGGACTGTGAAAGTGTTGGGTCTTCCTCCAGGATGCCTGCATGGGACCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp ATGACACATATCCTGGAAGGACACAGAACCCACACCCAGCCCAGCTGGCACCAGAACCGGTCCAGGTTCTaGGCCACCTGCTTCCACAGG +
Preference number: 4 (lower is better)
Translates to: MTHILEGHRTHTQPSWHQNRSRF*ATCFHR
Trigger: CCTGTGGAAGCAGGTGGCCCAGAACCTGGACCGGTT...CTGGTGCCAGCTGGGCTGGGTGTGGGTTCTGTGTCCTTCCAGGATATGTGTCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp TGGGGTCCCATGCAGGCATCCTGGAGGAAGACCCAACACTTTCACAGTCCCCTAAGGCGTGGGAAGGTGTaGAACCGGTCCAGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: WGPMQASWRKTQHFHSPLRRGKV*NRSRFW
Trigger: CCAGAACCTGGACCGGTTCCACACCTTCCCACGCCT...TAGGGGACTGTGAAAGTGTTGGGTCTTCCTCCAGGATGCCTGCATGGGACCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp TGGCTGAGCTCCTGCAGGGAAATCCCAGACCCTGAGACTGGCTCTAGGAGTGGAGAGCGGTGCACGAAGTaGAAGTTCTTTCCGCCGCAC +
Preference number: 4 (lower is better)
Translates to: WLSSCREIPDPETGSRSGERCTK*KFFPPH
Trigger: GTGCGGCGGAAAGAACTTCCACTTCGTGCACCGCTC...TCCACTCCTAGAGCCAGTCTCAGGGTCTGGGATTTCCCTGCAGGAGCTCAGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp TGGCACCAGCACCCACCCCCATCCATGGGCCAGTGGCACTTGGGGAATGGCCACTACGGGCAAAGGACTTaGCATCAATCACTGCAGAGA +
Preference number: 4 (lower is better)
Translates to: WHQHPPPSMGQWHLGNGHYGQRT*HQSLQR
Trigger: TCTCTGCAGTGATTGATGCCAAGTCCTTTGCCCGTA...GTGGCCATTCCCCAAGTGCCACTGGCCCATGGATGGGGGTGGGTGCTGGTGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290597.9
ENST00000375341.8
CDS-3UTR CCA 90 bp TGGCTGAGCTCCTGCAGGGAAATCCCAGACCCTGAGACTGGCTCTAGGAGTGGAACGACGTCCTTATCCTaGGAGAACACTGCCCCCGTG +
Preference number: 4 (lower is better)
Translates to: WLSSCREIPDPETGSRSGTTSLS*ENTAPV
Trigger: CACGGGGGCAGTGTTCTCCCAGGATAAGGACGTCGT...TCCACTCCTAGAGCCAGTCTCAGGGTCTGGGATTTCCCTGCAGGAGCTCAGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp TCCAAGCAGGAGGCATCTGTGGGAGGAATCGTGGTCACAGATTGGCTGCGTCAACCCCCAAAGGGCTGCTaGCCCACTATCGAGCCAGTG +
Preference number: 4 (lower is better)
Translates to: SKQEASVGGIVVTDWLRQPPKGC*PTIEPV
Trigger: CACTGGCTCGATAGTGGGCCAGCAGCCCTTTGGGGG...TTGACGCAGCCAATCTGTGACCACGATTCCTCCCACAGATGCCTCCTGCTTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp CAGAATCCAAGCAGGAGGCATCTGTGGGAGGAATCGTGGTCACAGATTGGCTGCCCCCTGGCTTGTCATTaGTTCCAGAGGCTCGGGCCC +
Preference number: 4 (lower is better)
Translates to: QNPSRRHLWEESWSQIGCPLACH*FQRLGP
Trigger: GGGCCCGAGCCTCTGGAACCAATGACAAGCCAGGGG...GCAGCCAATCTGTGACCACGATTCCTCCCACAGATGCCTCCTGCTTGGATTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp CCTACTGGCCCAGGTGGGTCTGGGCAAAGATACAGTGAGGAAGGTAGACAGCCCGCCTACTGGCCCAGGTaGGTCTGGGCAAAGATACAG +
Preference number: 4 (lower is better)
Translates to: PTGPGGSGQRYSEEGRQPAYWPR*VWAKIQ
Trigger: CTGTATCTTTGCCCAGACCCACCTGGGCCAGTAGGC...GGGCTGTCTACCTTCCTCACTGTATCTTTGCCCAGACCCACCTGGGCCAGTAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp CCCATGCAGGCATCCTGGAGGAAGACCCAACACTTTCACAGTCCCCTAAGAACCGGGCCAGTGAGGGACTaGTCCACACAGAGCCACTCC +
Preference number: 4 (lower is better)
Translates to: PMQASWRKTQHFHSPLRTGPVRD*STQSHS
Trigger: GGAGTGGCTCTGTGTGGACCAGTCCCTCACTGGCCC...GGTTCTTAGGGGACTGTGAAAGTGTTGGGTCTTCCTCCAGGATGCCTGCATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR TCA 90 bp TGGCTGAGCTCCTGCAGGGAAATCCCAGACCCTGAGACTGGCTCTAGGAGTGGAAGATCTCCTCCTTCATaGTGGGCTCCTGAGGGTCCT +
Preference number: 4 (lower is better)
Translates to: WLSSCREIPDPETGSRSGRSPPS*WAPEGP
Trigger: AGGACCCTCAGGAGCCCATCATGAAGGAGGAGATCT...TCCACTCCTAGAGCCAGTCTCAGGGTCTGGGATTTCCCTGCAGGAGCTCAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375341.8
CDS-3UTR TCA 90 bp GCCAGGCACCAGGGTCATACCTCCCACATGGCCGATGGGATAAGGGGTAGTGGCTTATTGGGTGGCATCTaGGCAAATCCCATTGCCACC +
Preference number: 4 (lower is better)
Translates to: ARHQGHTSHMADGIRGSGLLGGI*ANPIAT
Trigger: GGTGGCAATGGGATTTGCTCAGATGCCACCCAATAA...GCCACTACCCCTTATCCCATCGGCCATGTGGGAGGTATGACCCTGGTGCCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR GCA 90 bp AATGACACATATCCTGGAAGGACACAGAACCCACACCCAGCCCAGCTGGCACCAGGCGACACTTGGTACTaGACGTCCGACGTCCACACC +
Preference number: 4 (lower is better)
Translates to: NDTYPGRTQNPHPAQLAPGDTWY*TSDVHT
Trigger: GGTGTGGACGTCGGACGTGCAGTACCAAGTGTCGCC...TGGTGCCAGCTGGGCTGGGTGTGGGTTCTGTGTCCTTCCAGGATATGTGTCATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR GCA 90 bp GGTCATACCTCCCACATGGCCGATGGGATAAGGGGTAGTGGCCATGTTCCTCCCGTCGATGAGTTCCGCTaGAGCGTCAATCTCCGCTTG +
Preference number: 4 (lower is better)
Translates to: GHTSHMADGIRGSGHVPPVDEFR*SVNLRL
Trigger: CAAGCGGAGATTGACGCTGCAGCGGAACTCATCGAC...GGGAGGAACATGGCCACTACCCCTTATCCCATCGGCCATGTGGGAGGTATGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR GCA 90 bp TGGCACCAGCACCCACCCCCATCCATGGGCCAGTGGCACTTGGGGAATGGCCACCTTGGCATCAATCACTaGAGAGAAGAAGGTCCCAAA +
Preference number: 4 (lower is better)
Translates to: WHQHPPPSMGQWHLGNGHLGINH*REEGPK
Trigger: TTTGGGACCTTCTTCTCTGCAGTGATTGATGCCAAG...GTGGCCATTCCCCAAGTGCCACTGGCCCATGGATGGGGGTGGGTGCTGGTGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR GCA 90 bp AGGCCCATCCAAGGTTTTCCAGAATCACGGCCTAAACCGGCAGGACCATCCCATGCTCCTGAGGGTCCTTaGTCTCCACGATGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: RPIQGFPESRPKPAGPSHAPEGP*SPRCRA
Trigger: AGCCCTGCATCGTGGAGAGCAAGGACCCTCAGGAGC...ATGGGATGGTCCTGCCGGTTTAGGCCGTGATTCTGGAAAACCTTGGATGGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375341.8
CDS-3UTR GCA 90 bp TCTGGGCAAAGATACAGTGAGGAAGGTAGACAGCCCAGACCAGAGAGGGCAAGGGGCCATAGCTGGTGGTaGTGTCAACCAGCTGCAGCG +
Preference number: 4 (lower is better)
Translates to: SGQRYSEEGRQPRPERARGHSWW*CQPAAA
Trigger: CGCTGCAGCTGGTTGACAGCACCACCAGCTATGGCC...CCTTGCCCTCTCTGGTCTGGGCTGTCTACCTTCCTCACTGTATCTTTGCCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR GCA 90 bp CAGTGTAGAACCAGTAGAACTAAGAATACTCCAGCCTGTGCCCCCACCCAGCCAGTCTCCTTGATGACCTaGGGCGACGTCCAGCGCAGG +
Preference number: 4 (lower is better)
Translates to: QCRTSRTKNTPACAPTQPVSLMT*GDVQRR
Trigger: CCTGCGCTGGACGTCGCCGCAGGTCATCAAGGAGAC...TGGCTGGGTGGGGGCACAGGCTGGAGTATTCTTAGTTCTACTGGTTCTACACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp CAGTGTAGAACCAGTAGAACTAAGAATACTCCAGCCTGTGCCCCCACCCAGCCAATCCCCCACCACGCATaGGATGGCTTCCATCCGGCC +
Preference number: 4 (lower is better)
Translates to: QCRTSRTKNTPACAPTQPIPHHA*DGFHPA
Trigger: GGCCGGATGGAAGCCATCCCATGCGTGGTGGGGGAT...TGGCTGGGTGGGGGCACAGGCTGGAGTATTCTTAGTTCTACTGGTTCTACACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp GCACCAGCACCCACCCCCATCCATGGGCCAGTGGCACTTGGGGAATGGCCACACCTGCATAACAGAACTTaGCCACCTTATGTCCATGGT +
Preference number: 4 (lower is better)
Translates to: APAPTPIHGPVALGEWPHLHNRT*PPYVHG
Trigger: ACCATGGACATAAGGTGGCCAAGTTCTGTTATGCAG...GTGTGGCCATTCCCCAAGTGCCACTGGCCCATGGATGGGGGTGGGTGCTGGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp TGGCACCAGCACCCACCCCCATCCATGGGCCAGTGGCACTTGGGGAATGGCCACCTGCATAACAGAACTTaGCCACCTTATGTCCATGGT +
Preference number: 4 (lower is better)
Translates to: WHQHPPPSMGQWHLGNGHLHNRT*PPYVHG
Trigger: ACCATGGACATAAGGTGGCCAAGTTCTGTTATGCAG...GTGGCCATTCCCCAAGTGCCACTGGCCCATGGATGGGGGTGGGTGCTGGTGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp ATCTCTGACCACTCAGAATCCAAGCAGGAGGCATCTGGACGGACAGACAGCTGGGTCCCACCATGGTCTTaGCGAGGATCTCAGCCCTGC +
Preference number: 4 (lower is better)
Translates to: ISDHSESKQEASGRTDSWVPPWS*RGSQPC
Trigger: GCAGGGCTGAGATCCTCGCCAAGACCATGGTGGGAC...CCAGCTGTCTGTCCGTCCAGATGCCTCCTGCTTGGATTCTGAGTGGTCAGAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290597.9
CDS-3UTR CCA 90 bp CAGAATCCAAGCAGGAGGCATCTGTGGGAGGAATCGTGGTCACAGATTGGCTGCGTCCCACCATGGTCTTaGCGAGGATCTCAGCCCTGC +
Preference number: 4 (lower is better)
Translates to: QNPSRRHLWEESWSQIGCVPPWS*RGSQPC
Trigger: GCAGGGCTGAGATCCTCGCCAAGACCATGGTGGGAC...GCAGCCAATCTGTGACCACGATTCCTCCCACAGATGCCTCCTGCTTGGATTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp TCCAAGCAGGAGGCATCTGTGGGAGGAATCGTGGTCACAGATTGGCTGCGTCAAAGGCGTGGGAAGGTGTaGAACCGGTCCAGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: SKQEASVGGIVVTDWLRQRRGKV*NRSRFW
Trigger: CCAGAACCTGGACCGGTTCCACACCTTCCCACGCCT...TTGACGCAGCCAATCTGTGACCACGATTCCTCCCACAGATGCCTCCTGCTTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp CACAGTGTAGAACCAGTAGAACTAAGAATACTCCAGCCTGTGCCCCCACCCAGCCTCTCCAGCCAGGCGTaGGAAGGTGTGGAACCGGTC +
Preference number: 4 (lower is better)
Translates to: HSVEPVELRILQPVPPPSLSSQA*EGVEPV
Trigger: GACCGGTTCCACACCTTCCCACGCCTGGCTGGAGAG...GCTGGGTGGGGGCACAGGCTGGAGTATTCTTAGTTCTACTGGTTCTACACTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp ATGACACATATCCTGGAAGGACACAGAACCCACACCCAGCCCAGCTGGCACCAGCACGCGGAACACTTCTaGCCACCGTACTCGAAGGCT +
Preference number: 4 (lower is better)
Translates to: MTHILEGHRTHTQPSWHQHAEHF*PPYSKA
Trigger: AGCCTTCGAGTACGGTGGCCAGAAGTGTTCCGCGTG...CTGGTGCCAGCTGGGCTGGGTGTGGGTTCTGTGTCCTTCCAGGATATGTGTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp CACTCAGAATCCAAGCAGGAGGCATCTGTGGGAGGAATCGTGGTCACAGATTGGCCCCCAAAGGGCTGCTaGCCCACTATCGAGCCAGTG +
Preference number: 4 (lower is better)
Translates to: HSESKQEASVGGIVVTDWPPKGC*PTIEPV
Trigger: CACTGGCTCGATAGTGGGCCAGCAGCCCTTTGGGGG...CCAATCTGTGACCACGATTCCTCCCACAGATGCCTCCTGCTTGGATTCTGAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp GGTCCCATGCAGGCATCCTGGAGGAAGACCCAACACTTTCACAGTCCCCTAAGAGTCACCATGGCACAGTaGTGGCTGAGCTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: GPMQASWRKTQHFHSPLRVTMAQ*WLSSCR
Trigger: CCTGCAGGAGCTCAGCCACCACTGTGCCATGGTGAC...TCTTAGGGGACTGTGAAAGTGTTGGGTCTTCCTCCAGGATGCCTGCATGGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR TCA 90 bp CACAGTGTAGAACCAGTAGAACTAAGAATACTCCAGCCTGTGCCCCCACCCAGCCAGGGTCGCCCACTTTaGTCCGACTGTGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: HSVEPVELRILQPVPPPSQGRPL*SDCAPP
Trigger: TGGAGGAGCACAGTCGGATCAAAGTGGGCGACCCTG...GCTGGGTGGGGGCACAGGCTGGAGTATTCTTAGTTCTACTGGTTCTACACTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR TCA 90 bp AGGCCCATCCAAGGTTTTCCAGAATCACGGCCTAAACCGGCAGGACCATCCCATTTCATGATGGGCTCCTaGGGGTCCTTGCTCTCCACG +
Preference number: 4 (lower is better)
Translates to: RPIQGFPESRPKPAGPSHFMMGS*GSLLST
Trigger: CGTGGAGAGCAAGGACCCTCAGGAGCCCATCATGAA...ATGGGATGGTCCTGCCGGTTTAGGCCGTGATTCTGGAAAACCTTGGATGGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375341.8
CDS-3UTR TCA 90 bp ACCAGCACCCACCCCCATCCATGGGCCAGTGGCACTTGGGGAATGGCCACACCATGCTTTACAGATCTCTaGCCACTCAGAATCCAAGCA +
Preference number: 4 (lower is better)
Translates to: TSTHPHPWASGTWGMATPCFTDL*PLRIQA
Trigger: TGCTTGGATTCTGAGTGGTCAGAGATCTGTAAAGCA...TGGTGTGGCCATTCCCCAAGTGCCACTGGCCCATGGATGGGGGTGGGTGCTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR GCA 90 bp TCCAAGCAGGAGGCATCTGTGGGAGGAATCGTGGTCACAGATTGGCTGCGTCAAGATCTGGGCCCGGTCTaGAATAGGCTTCAGGTCCCA +
Preference number: 4 (lower is better)
Translates to: SKQEASVGGIVVTDWLRQDLGPV*NRLQVP
Trigger: TGGGACCTGAAGCCTATTGCAGACCGGGCCCAGATC...TTGACGCAGCCAATCTGTGACCACGATTCCTCCCACAGATGCCTCCTGCTTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR GCA 90 bp CAGAATCCAAGCAGGAGGCATCTGTGGGAGGAATCGTGGTCACAGATTGGCTGCCAGCCTCCCGAAGGATaGGGTAGACAGCATAGCTGG +
Preference number: 4 (lower is better)
Translates to: QNPSRRHLWEESWSQIGCQPPEG*GRQHSW
Trigger: CCAGCTATGCTGTCTACCGCATCCTTCGGGAGGCTG...GCAGCCAATCTGTGACCACGATTCCTCCCACAGATGCCTCCTGCTTGGATTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR GCA 90 bp GGTCCCATGCAGGCATCCTGGAGGAAGACCCAACACTTTCACAGTCCCCTAAGACAGCCTCCCGAAGGATaGGGTAGACAGCATAGCTGG +
Preference number: 4 (lower is better)
Translates to: GPMQASWRKTQHFHSPLRQPPEG*GRQHSW
Trigger: CCAGCTATGCTGTCTACCGCATCCTTCGGGAGGCTG...TCTTAGGGGACTGTGAAAGTGTTGGGTCTTCCTCCAGGATGCCTGCATGGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR GCA 90 bp AATGACACATATCCTGGAAGGACACAGAACCCACACCCAGCCCAGCTGGCACCAACTTTGATCCGACTGTaGTCCTCCAGCAGCCGCCCT +
Preference number: 4 (lower is better)
Translates to: NDTYPGRTQNPHPAQLAPTLIRL*SSSSRP
Trigger: AGGGCGGCTGCTGGAGGAGCACAGTCGGATCAAAGT...TGGTGCCAGCTGGGCTGGGTGTGGGTTCTGTGTCCTTCCAGGATATGTGTCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR GCA 90 bp CAGAATCCAAGCAGGAGGCATCTGTGGGAGGAATCGTGGTCACAGATTGGCTGCACTTTGATCCGACTGTaGTCCTCCAGCAGCCGCCCT +
Preference number: 4 (lower is better)
Translates to: QNPSRRHLWEESWSQIGCTLIRL*SSSSRP
Trigger: AGGGCGGCTGCTGGAGGAGCACAGTCGGATCAAAGT...GCAGCCAATCTGTGACCACGATTCCTCCCACAGATGCCTCCTGCTTGGATTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR GCA 90 bp ATGACACATATCCTGGAAGGACACAGAACCCACACCCAGCCCAGCTGGCACCAGGGTGAGGAGCGTGCGTaGTCCAGCCACTTCTTGATA +
Preference number: 4 (lower is better)
Translates to: MTHILEGHRTHTQPSWHQGEERA*SSHFLI
Trigger: TATCAAGAAGTGGCTGGAGCACGCACGCTCCTCACC...CTGGTGCCAGCTGGGCTGGGTGTGGGTTCTGTGTCCTTCCAGGATATGTGTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290597.9
ENST00000375341.8
CDS-3UTR GCA 90 bp GTGGGGTCCCATGCAGGCATCCTGGAGGAAGACCCAACACTTTCACAGTCCCCTGTGCTGTCAACCAGCTaGAGCGTCTCCTTGTACTTG +
Preference number: 4 (lower is better)
Translates to: VGSHAGILEEDPTLSQSPVLSTS*SVSLYL
Trigger: CAAGTACAAGGAGACGCTGCAGCTGGTTGACAGCAC...AGGGGACTGTGAAAGTGTTGGGTCTTCCTCCAGGATGCCTGCATGGGACCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR GCA 90 bp GGTCCCATGCAGGCATCCTGGAGGAAGACCCAACACTTTCACAGTCCCCTAAGAGTGAGTGGTGAGGTTTaGCAAGGGGCCCAGAATGGC +
Preference number: 4 (lower is better)
Translates to: GPMQASWRKTQHFHSPLRVSGEV*QGAQNG
Trigger: GCCATTCTGGGCCCCTTGGCAAACCTCACCACTCAC...TCTTAGGGGACTGTGAAAGTGTTGGGTCTTCCTCCAGGATGCCTGCATGGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp GGTCATACCTCCCACATGGCCGATGGGATAAGGGGTAGTGGCCATGTTCCTCCCGCGTCAATCTCCGCTTaGATCACGGTCTTACCCTGT +
Preference number: 4 (lower is better)
Translates to: GHTSHMADGIRGSGHVPPASISA*ITVLPC
Trigger: ACAGGGTAAGACCGTGATCCAAGCGGAGATTGACGC...GGGAGGAACATGGCCACTACCCCTTATCCCATCGGCCATGTGGGAGGTATGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp ATGACACATATCCTGGAAGGACACAGAACCCACACCCAGCCCAGCTGGCACCAGGGTAGACAGCATAGCTaGCCAGCATGGCAGTGTCAC +
Preference number: 4 (lower is better)
Translates to: MTHILEGHRTHTQPSWHQGRQHS*PAWQCH
Trigger: GTGACACTGCCATGCTGGCCAGCTATGCTGTCTACC...CTGGTGCCAGCTGGGCTGGGTGTGGGTTCTGTGTCCTTCCAGGATATGTGTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp AATGACACATATCCTGGAAGGACACAGAACCCACACCCAGCCCAGCTGGCACCAGAGCGGTGCACGAAGTaGAAGTTCTTTCCGCCGCAC +
Preference number: 4 (lower is better)
Translates to: NDTYPGRTQNPHPAQLAPERCTK*KFFPPH
Trigger: GTGCGGCGGAAAGAACTTCCACTTCGTGCACCGCTC...TGGTGCCAGCTGGGCTGGGTGTGGGTTCTGTGTCCTTCCAGGATATGTGTCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp AGGCCCATCCAAGGTTTTCCAGAATCACGGCCTAAACCGGCAGGACCATCCCATCACGCGGAACACTTCTaGCCACCGTACTCGAAGGCT +
Preference number: 4 (lower is better)
Translates to: RPIQGFPESRPKPAGPSHHAEHF*PPYSKA
Trigger: AGCCTTCGAGTACGGTGGCCAGAAGTGTTCCGCGTG...ATGGGATGGTCCTGCCGGTTTAGGCCGTGATTCTGGAAAACCTTGGATGGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp GGTCCCATGCAGGCATCCTGGAGGAAGACCCAACACTTTCACAGTCCCCTAAGAACGACGTCCTTATCCTaGGAGAACACTGCCCCCGTG +
Preference number: 4 (lower is better)
Translates to: GPMQASWRKTQHFHSPLRTTSLS*ENTAPV
Trigger: CACGGGGGCAGTGTTCTCCCAGGATAAGGACGTCGT...TCTTAGGGGACTGTGAAAGTGTTGGGTCTTCCTCCAGGATGCCTGCATGGGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp TGGGGTCCCATGCAGGCATCCTGGAGGAAGACCCAACACTTTCACAGTCCCCTAGTAGTGTGGGCCCCCTaGCTTGTCATTGGTTCCAGA +
Preference number: 4 (lower is better)
Translates to: WGPMQASWRKTQHFHSPLVVWAP*LVIGSR
Trigger: TCTGGAACCAATGACAAGCCAGGGGGCCCACACTAC...TAGGGGACTGTGAAAGTGTTGGGTCTTCCTCCAGGATGCCTGCATGGGACCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp CACAGTGTAGAACCAGTAGAACTAAGAATACTCCAGCCTGTGCCCCCACCCAGCCCATCCATGGGCCAGTaGCACTTGGGGAATGGCCAC +
Preference number: 4 (lower is better)
Translates to: HSVEPVELRILQPVPPPSPSMGQ*HLGNGH
Trigger: GTGGCCATTCCCCAAGTGCCACTGGCCCATGGATGG...GCTGGGTGGGGGCACAGGCTGGAGTATTCTTAGTTCTACTGGTTCTACACTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp AGGCCCATCCAAGGTTTTCCAGAATCACGGCCTAAACCGGCAGGACCATCCCATGCCTACTGGCCCAGGTaGGTCTGGGCAAAGATACAG +
Preference number: 4 (lower is better)
Translates to: RPIQGFPESRPKPAGPSHAYWPR*VWAKIQ
Trigger: CTGTATCTTTGCCCAGACCCACCTGGGCCAGTAGGC...ATGGGATGGTCCTGCCGGTTTAGGCCGTGATTCTGGAAAACCTTGGATGGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp AATGACACATATCCTGGAAGGACACAGAACCCACACCCAGCCCAGCTGGCACCAACCATGGCACAGTGGTaGCTGAGCTCCTGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: NDTYPGRTQNPHPAQLAPTMAQW*LSSCRE
Trigger: TTCCCTGCAGGAGCTCAGCCACCACTGTGCCATGGT...TGGTGCCAGCTGGGCTGGGTGTGGGTTCTGTGTCCTTCCAGGATATGTGTCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR TCA 90 bp CACTCAGAATCCAAGCAGGAGGCATCTGTGGGAGGAATCGTGGTCACAGATTGGGGTGCTCTGAGCTGGTaGCAGTGTCCCCAAATAGGG +
Preference number: 4 (lower is better)
Translates to: HSESKQEASVGGIVVTDWGALSW*QCPQIG
Trigger: CCCTATTTGGGGACACTGTCACCAGCTCAGAGCACC...CCAATCTGTGACCACGATTCCTCCCACAGATGCCTCCTGCTTGGATTCTGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR TCA 90 bp CAAGCAGGAGGCATCTGGACGGACAGACAGCTGGACGGTGGAGCCCGAGAGGGGCCTAAGAACCATCCTTaGAAGTCATGCTTTACAGAT +
Preference number: 4 (lower is better)
Translates to: QAGGIWTDRQLDGGAREGPKNHP*KSCFTD
Trigger: ATCTGTAAAGCATGACTTTCAAGGATGGTTCTTAGG...CCCCTCTCGGGCTCCACCGTCCAGCTGTCTGTCCGTCCAGATGCCTCCTGCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290597.9
CDS-3UTR TCA 90 bp CAGTGTAGAACCAGTAGAACTAAGAATACTCCAGCCTGTGCCCCCACCCAGCCATCTCAAACCAGAGCCTaGGGCATGGGAGAGGCCAGA +
Preference number: 4 (lower is better)
Translates to: QCRTSRTKNTPACAPTQPSQTRA*GMGEAR
Trigger: TCTGGCCTCTCCCATGCCTCAGGCTCTGGTTTGAGA...TGGCTGGGTGGGGGCACAGGCTGGAGTATTCTTAGTTCTACTGGTTCTACACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR TCA 90 bp ATGACACATATCCTGGAAGGACACAGAACCCACACCCAGCCCAGCTGGCACCAGCCCCACAGGTCAGTCTaGGTTACACTTTACCCTGGA +
Preference number: 4 (lower is better)
Translates to: MTHILEGHRTHTQPSWHQPHRSV*VTLYPG
Trigger: TCCAGGGTAAAGTGTAACTCAGACTGACCTGTGGGG...CTGGTGCCAGCTGGGCTGGGTGTGGGTTCTGTGTCCTTCCAGGATATGTGTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR TCA 90 bp CCCATGCAGGCATCCTGGAGGAAGACCCAACACTTTCACAGTCCCCTAAGAACCTCTACAGGTAGGGCCTaGGGATCAAAGGGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: PMQASWRKTQHFHSPLRTSTGRA*GSKGRL
Trigger: CAGCCTTCCCTTTGATCCTCAGGCCCTACCTGTAGA...GGTTCTTAGGGGACTGTGAAAGTGTTGGGTCTTCCTCCAGGATGCCTGCATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR TCA 90 bp TCTGGGCAAAGATACAGTGAGGAAGGTAGACAGCCCAGACCAGAGAGGGCAAGGTCTACAGGTAGGGCCTaGGGATCAAAGGGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: SGQRYSEEGRQPRPERARSTGRA*GSKGRL
Trigger: CAGCCTTCCCTTTGATCCTCAGGCCCTACCTGTAGA...CCTTGCCCTCTCTGGTCTGGGCTGTCTACCTTCCTCACTGTATCTTTGCCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR GCA 90 bp CAGAATCCAAGCAGGAGGCATCTGTGGGAGGAATCGTGGTCACAGATTGGCTGCCCCACTCAGCATGTCTaGCGCCTTCAGGAAGATCTG +
Preference number: 4 (lower is better)
Translates to: QNPSRRHLWEESWSQIGCPTQHV*RLQEDL
Trigger: CAGATCTTCCTGAAGGCGGCAGACATGCTGAGTGGG...GCAGCCAATCTGTGACCACGATTCCTCCCACAGATGCCTCCTGCTTGGATTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR GCA 90 bp ATCTCTGACCACTCAGAATCCAAGCAGGAGGCATCTGGACGGACAGACAGCTGGGTCGATGAGTTCCGCTaGAGCGTCAATCTCCGCTTG +
Preference number: 4 (lower is better)
Translates to: ISDHSESKQEASGRTDSWVDEFR*SVNLRL
Trigger: CAAGCGGAGATTGACGCTGCAGCGGAACTCATCGAC...CCAGCTGTCTGTCCGTCCAGATGCCTCCTGCTTGGATTCTGAGTGGTCAGAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290597.9
CDS-3UTR GCA 90 bp ATCTCTGACCACTCAGAATCCAAGCAGGAGGCATCTGGACGGACAGACAGCTGGACGTCGGCCGAGCGGTaGACGAAGTGGAAGTTCTTT +
Preference number: 4 (lower is better)
Translates to: ISDHSESKQEASGRTDSWTSAER*TKWKFF
Trigger: AAAGAACTTCCACTTCGTGCACCGCTCGGCCGACGT...CCAGCTGTCTGTCCGTCCAGATGCCTCCTGCTTGGATTCTGAGTGGTCAGAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290597.9
CDS-3UTR GCA 90 bp CAGAATCCAAGCAGGAGGCATCTGTGGGAGGAATCGTGGTCACAGATTGGCTGCACGTCGGCCGAGCGGTaGACGAAGTGGAAGTTCTTT +
Preference number: 4 (lower is better)
Translates to: QNPSRRHLWEESWSQIGCTSAER*TKWKFF
Trigger: AAAGAACTTCCACTTCGTGCACCGCTCGGCCGACGT...GCAGCCAATCTGTGACCACGATTCCTCCCACAGATGCCTCCTGCTTGGATTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR GCA 90 bp TGGGGTCCCATGCAGGCATCCTGGAGGAAGACCCAACACTTTCACAGTCCCCTAGTGCTGTCAACCAGCTaGAGCGTCTCCTTGTACTTG +
Preference number: 4 (lower is better)
Translates to: WGPMQASWRKTQHFHSPLVLSTS*SVSLYL
Trigger: CAAGTACAAGGAGACGCTGCAGCTGGTTGACAGCAC...TAGGGGACTGTGAAAGTGTTGGGTCTTCCTCCAGGATGCCTGCATGGGACCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR GCA 90 bp CCCATGCAGGCATCCTGGAGGAAGACCCAACACTTTCACAGTCCCCTAAGAACCACCTTTGTGGCCTCCTaGACGACGTCCTTATCCTGG +
Preference number: 4 (lower is better)
Translates to: PMQASWRKTQHFHSPLRTTFVAS*TTSLSW
Trigger: CCAGGATAAGGACGTCGTGCAGGAGGCCACAAAGGT...GGTTCTTAGGGGACTGTGAAAGTGTTGGGTCTTCCTCCAGGATGCCTGCATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR GCA 90 bp TGGGGTCCCATGCAGGCATCCTGGAGGAAGACCCAACACTTTCACAGTCCCCTAAAGGATCCCAAGAGCTaGTCCATCTCCTTTCCCCAG +
Preference number: 4 (lower is better)
Translates to: WGPMQASWRKTQHFHSPLKDPKS*SISFPQ
Trigger: CTGGGGAAAGGAGATGGAGCAGCTCTTGGGATCCTT...TAGGGGACTGTGAAAGTGTTGGGTCTTCCTCCAGGATGCCTGCATGGGACCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR GCA 90 bp CAGTGTAGAACCAGTAGAACTAAGAATACTCCAGCCTGTGCCCCCACCCAGCCATGGTGGCTGAGCTCCTaGAGGGAAATCCCAGACCCT +
Preference number: 4 (lower is better)
Translates to: QCRTSRTKNTPACAPTQPWWLSS*REIPDP
Trigger: AGGGTCTGGGATTTCCCTGCAGGAGCTCAGCCACCA...TGGCTGGGTGGGGGCACAGGCTGGAGTATTCTTAGTTCTACTGGTTCTACACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR GCA 90 bp CACAGTGTAGAACCAGTAGAACTAAGAATACTCCAGCCTGTGCCCCCACCCAGCTGGTGGCTGAGCTCCTaGAGGGAAATCCCAGACCCT +
Preference number: 4 (lower is better)
Translates to: HSVEPVELRILQPVPPPSWWLSS*REIPDP
Trigger: AGGGTCTGGGATTTCCCTGCAGGAGCTCAGCCACCA...GCTGGGTGGGGGCACAGGCTGGAGTATTCTTAGTTCTACTGGTTCTACACTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp GGTCCCATGCAGGCATCCTGGAGGAAGACCCAACACTTTCACAGTCCCCTAAGATACCCTGTCCCACCATaGTCTTGGCGAGGATCTCAG +
Preference number: 4 (lower is better)
Translates to: GPMQASWRKTQHFHSPLRYPVPP*SWRGSQ
Trigger: CTGAGATCCTCGCCAAGACCATGGTGGGACAGGGTA...TCTTAGGGGACTGTGAAAGTGTTGGGTCTTCCTCCAGGATGCCTGCATGGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp GGTCCCATGCAGGCATCCTGGAGGAAGACCCAACACTTTCACAGTCCCCTAAGAGGTAGACAGCATAGCTaGCCAGCATGGCAGTGTCAC +
Preference number: 4 (lower is better)
Translates to: GPMQASWRKTQHFHSPLRGRQHS*PAWQCH
Trigger: GTGACACTGCCATGCTGGCCAGCTATGCTGTCTACC...TCTTAGGGGACTGTGAAAGTGTTGGGTCTTCCTCCAGGATGCCTGCATGGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp TCTGGGCAAAGATACAGTGAGGAAGGTAGACAGCCCAGACCAGAGAGGGCAAGGGGTAGACAGCATAGCTaGCCAGCATGGCAGTGTCAC +
Preference number: 4 (lower is better)
Translates to: SGQRYSEEGRQPRPERARGRQHS*PAWQCH
Trigger: GTGACACTGCCATGCTGGCCAGCTATGCTGTCTACC...CCTTGCCCTCTCTGGTCTGGGCTGTCTACCTTCCTCACTGTATCTTTGCCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp CACAGTGTAGAACCAGTAGAACTAAGAATACTCCAGCCTGTGCCCCCACCCAGCACGACGTCCTTATCCTaGGAGAACACTGCCCCCGTG +
Preference number: 4 (lower is better)
Translates to: HSVEPVELRILQPVPPPSTTSLS*ENTAPV
Trigger: CACGGGGGCAGTGTTCTCCCAGGATAAGGACGTCGT...GCTGGGTGGGGGCACAGGCTGGAGTATTCTTAGTTCTACTGGTTCTACACTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp CACAGTGTAGAACCAGTAGAACTAAGAATACTCCAGCCTGTGCCCCCACCCAGCTCCTCAGCACCTTTGTaGCCTCCTGCACGACGTCCT +
Preference number: 4 (lower is better)
Translates to: HSVEPVELRILQPVPPPSSSAPL*PPARRP
Trigger: AGGACGTCGTGCAGGAGGCCACAAAGGTGCTGAGGA...GCTGGGTGGGGGCACAGGCTGGAGTATTCTTAGTTCTACTGGTTCTACACTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp TGGGGTCCCATGCAGGCATCCTGGAGGAAGACCCAACACTTTCACAGTCCCCTACCCATGCAGGCATCCTaGAGGAAGACCCAACACTTT +
Preference number: 4 (lower is better)
Translates to: WGPMQASWRKTQHFHSPLPMQAS*RKTQHF
Trigger: AAAGTGTTGGGTCTTCCTCCAGGATGCCTGCATGGG...TAGGGGACTGTGAAAGTGTTGGGTCTTCCTCCAGGATGCCTGCATGGGACCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp TGGGGTCCCATGCAGGCATCCTGGAGGAAGACCCAACACTTTCACAGTCCCCTACCAAACACAGGCACCTaGAGTAAGGCATGCCAGCAT +
Preference number: 4 (lower is better)
Translates to: WGPMQASWRKTQHFHSPLPNTGT*SKACQH
Trigger: ATGCTGGCATGCCTTACTCCAGGTGCCTGTGTTTGG...TAGGGGACTGTGAAAGTGTTGGGTCTTCCTCCAGGATGCCTGCATGGGACCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR TCA 90 bp CAGAATCCAAGCAGGAGGCATCTGTGGGAGGAATCGTGGTCACAGATTGGCTGCAAAAGAATGGGCCAGTaGGGGACTGGTCCACACAGA +
Preference number: 4 (lower is better)
Translates to: QNPSRRHLWEESWSQIGCKRMGQ*GTGPHR
Trigger: TCTGTGTGGACCAGTCCCTCACTGGCCCATTCTTTT...GCAGCCAATCTGTGACCACGATTCCTCCCACAGATGCCTCCTGCTTGGATTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR GCA 90 bp CACAGTCCCCTAAGAACCATCCTTGAAAGTCATGCTTTACAGATCTCTGACCACCGCTCAGGGCTGCCCTaGGTGAAGGCTAAGACGGGC +
Preference number: 4 (lower is better)
Translates to: HSPLRTILESHALQISDHRSGLP*VKAKTG
Trigger: GCCCGTCTTAGCCTTCACGCAGGGCAGCCCTGAGCG...GTGGTCAGAGATCTGTAAAGCATGACTTTCAAGGATGGTTCTTAGGGGACTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR GCA 90 bp TTAAGTAACAGGCATTTTATTGGGTGGCATCTGAGCAAATCCCATTGCCACCTCGGCACGCTGATGGGCTaGTGCCCCTCCAGCTCCACC +
Preference number: 4 (lower is better)
Translates to: LSNRHFIGWHLSKSHCHLGTLMG*CPSSST
Trigger: GGTGGAGCTGGAGGGGCAGCAGCCCATCAGCGTGCC...GAGGTGGCAATGGGATTTGCTCAGATGCCACCCAATAAAATGCCTGTTACTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290597.9
ENST00000375341.8
CDS-3UTR GCA 90 bp TCTGGGCAAAGATACAGTGAGGAAGGTAGACAGCCCAGACCAGAGAGGGCAAGGTTGATGCCACAGAGGTaGTCTGAGCTGGTGACAGTG +
Preference number: 4 (lower is better)
Translates to: SGQRYSEEGRQPRPERARLMPQR*SELVTV
Trigger: CACTGTCACCAGCTCAGAGCACCTCTGTGGCATCAA...CCTTGCCCTCTCTGGTCTGGGCTGTCTACCTTCCTCACTGTATCTTTGCCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR GCA 90 bp GAAGGGAGGGCCAATGTCTGCCTTGGCCTGTGTCACCATGGCACAGTGGTGGCTCTTGGCATCAATCACTaGAGAGAAGAAGGTCCCAAA +
Preference number: 4 (lower is better)
Translates to: EGRANVCLGLCHHGTVVALGINH*REEGPK
Trigger: TTTGGGACCTTCTTCTCTGCAGTGATTGATGCCAAG...AGCCACCACTGTGCCATGGTGACACAGGCCAAGGCAGACATTGGCCCTCCCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR GCA 90 bp CAGTGTAGAACCAGTAGAACTAAGAATACTCCAGCCTGTGCCCCCACCCAGCCACCTTGCTCTCCACGATaGAGGGCTCCACAAAGTAGC +
Preference number: 4 (lower is better)
Translates to: QCRTSRTKNTPACAPTQPPCSPR*RAPQSS
Trigger: GCTACTTTGTGGAGCCCTGCATCGTGGAGAGCAAGG...TGGCTGGGTGGGGGCACAGGCTGGAGTATTCTTAGTTCTACTGGTTCTACACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290597.9
ENST00000375341.8
CDS-3UTR GCA 90 bp CTAAGAACCATCCTTGAAAGTCATGCTTTACAGATCTCTGACCACTCAGAATCCCCCCACCCAGCCACCTaGCCCGGCCCCTCATGGGAA +
Preference number: 4 (lower is better)
Translates to: LRTILESHALQISDHSESPHPAT*PGPSWE
Trigger: TTCCCATGAGGGGCCGGGGCAGGTGGCTGGGTGGGG...GGATTCTGAGTGGTCAGAGATCTGTAAAGCATGACTTTCAAGGATGGTTCTTAG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR GCA 90 bp TCCTGGAGGAAGACCCAACACTTTCACAGTCCCCTAAGAACCATCCTTGAAAGTGAATACTCCAGCCTGTaGCCCCACCCAGCCACCTGC +
Preference number: 4 (lower is better)
Translates to: SWRKTQHFHSPLRTILESEYSSL*PHPATC
Trigger: GCAGGTGGCTGGGTGGGGGCACAGGCTGGAGTATTC...ACTTTCAAGGATGGTTCTTAGGGGACTGTGAAAGTGTTGGGTCTTCCTCCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR GCA 90 bp GGTCCCATGCAGGCATCCTGGAGGAAGACCCAACACTTTCACAGTCCCCTAAGAAAGGATCCCAAGAGCTaGTCCATCTCCTTTCCCCAG +
Preference number: 4 (lower is better)
Translates to: GPMQASWRKTQHFHSPLRKDPKS*SISFPQ
Trigger: CTGGGGAAAGGAGATGGAGCAGCTCTTGGGATCCTT...TCTTAGGGGACTGTGAAAGTGTTGGGTCTTCCTCCAGGATGCCTGCATGGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp TGGGGTCCCATGCAGGCATCCTGGAGGAAGACCCAACACTTTCACAGTCCCCTATTAAAAGGCGACACTTaGTACTGCACGTCCGACGTC +
Preference number: 4 (lower is better)
Translates to: WGPMQASWRKTQHFHSPLLKGDT*YCTSDV
Trigger: GACGTCGGACGTGCAGTACCAAGTGTCGCCTTTTAA...TAGGGGACTGTGAAAGTGTTGGGTCTTCCTCCAGGATGCCTGCATGGGACCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp GGTCATACCTCCCACATGGCCGATGGGATAAGGGGTAGTGGCCATGTTCCTCCCGCCACCTTATGTCCATaGTTAAAAGGCGACACTTGG +
Preference number: 4 (lower is better)
Translates to: GHTSHMADGIRGSGHVPPATLCP*LKGDTW
Trigger: CCAAGTGTCGCCTTTTAACCATGGACATAAGGTGGC...GGGAGGAACATGGCCACTACCCCTTATCCCATCGGCCATGTGGGAGGTATGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp GGTCCCATGCAGGCATCCTGGAGGAAGACCCAACACTTTCACAGTCCCCTAAGAGCGTCAATCTCCGCTTaGATCACGGTCTTACCCTGT +
Preference number: 4 (lower is better)
Translates to: GPMQASWRKTQHFHSPLRASISA*ITVLPC
Trigger: ACAGGGTAAGACCGTGATCCAAGCGGAGATTGACGC...TCTTAGGGGACTGTGAAAGTGTTGGGTCTTCCTCCAGGATGCCTGCATGGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp CACTCAGAATCCAAGCAGGAGGCATCTGTGGGAGGAATCGTGGTCACAGATTGGGCATGGCAGTGTCACTaGGCTTCCATAGGACCACGT +
Preference number: 4 (lower is better)
Translates to: HSESKQEASVGGIVVTDWAWQCH*ASIGPR
Trigger: ACGTGGTCCTATGGAAGCCCAGTGACACTGCCATGC...CCAATCTGTGACCACGATTCCTCCCACAGATGCCTCCTGCTTGGATTCTGAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp TCCTGGAGGAAGACCCAACACTTTCACAGTCCCCTAAGAACCATCCTTGAAAGTCTCTCCAGCCAGGCGTaGGAAGGTGTGGAACCGGTC +
Preference number: 4 (lower is better)
Translates to: SWRKTQHFHSPLRTILESLSSQA*EGVEPV
Trigger: GACCGGTTCCACACCTTCCCACGCCTGGCTGGAGAG...ACTTTCAAGGATGGTTCTTAGGGGACTGTGAAAGTGTTGGGTCTTCCTCCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp TCCTGGAGGAAGACCCAACACTTTCACAGTCCCCTAAGAACCATCCTTGAAAGTCCCCTGGCTTGTCATTaGTTCCAGAGGCTCGGGCCC +
Preference number: 4 (lower is better)
Translates to: SWRKTQHFHSPLRTILESPLACH*FQRLGP
Trigger: GGGCCCGAGCCTCTGGAACCAATGACAAGCCAGGGG...ACTTTCAAGGATGGTTCTTAGGGGACTGTGAAAGTGTTGGGTCTTCCTCCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp CACAGTCCCCTAAGAACCATCCTTGAAAGTCATGCTTTACAGATCTCTGACCACGGACGGACAGACAGCTaGACGGTGGAGCCCGAGAGG +
Preference number: 4 (lower is better)
Translates to: HSPLRTILESHALQISDHGRTDS*TVEPER
Trigger: CCTCTCGGGCTCCACCGTCCAGCTGTCTGTCCGTCC...GTGGTCAGAGATCTGTAAAGCATGACTTTCAAGGATGGTTCTTAGGGGACTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp CAGAATCCAAGCAGGAGGCATCTGTGGGAGGAATCGTGGTCACAGATTGGCTGCCCCATGCAGGCATCCTaGAGGAAGACCCAACACTTT +
Preference number: 4 (lower is better)
Translates to: QNPSRRHLWEESWSQIGCPMQAS*RKTQHF
Trigger: AAAGTGTTGGGTCTTCCTCCAGGATGCCTGCATGGG...GCAGCCAATCTGTGACCACGATTCCTCCCACAGATGCCTCCTGCTTGGATTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp TCCTGGAGGAAGACCCAACACTTTCACAGTCCCCTAAGAACCATCCTTGAAAGTGTGAGGTCGGCCACCTaGACGGACAGACAGCTGGAC +
Preference number: 4 (lower is better)
Translates to: SWRKTQHFHSPLRTILESVRSAT*TDRQLD
Trigger: GTCCAGCTGTCTGTCCGTCCAGGTGGCCGACCTCAC...ACTTTCAAGGATGGTTCTTAGGGGACTGTGAAAGTGTTGGGTCTTCCTCCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp ACCATCCTTGAAAGTCATGCTTTACAGATCTCTGACCACTCAGAATCCAAGCAGGGGACAGGGGCCTACTaGCCCAGGTGGGTCTGGGCA +
Preference number: 4 (lower is better)
Translates to: TILESHALQISDHSESKQGTGAY*PRWVWA
Trigger: TGCCCAGACCCACCTGGGCCAGTAGGCCCCTGTCCC...CTGCTTGGATTCTGAGTGGTCAGAGATCTGTAAAGCATGACTTTCAAGGATGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp CACTCAGAATCCAAGCAGGAGGCATCTGTGGGAGGAATCGTGGTCACAGATTGGCTGTGGGAGGAATCGTaGTCACAGATTGGCTGCGTC +
Preference number: 4 (lower is better)
Translates to: HSESKQEASVGGIVVTDWLWEES*SQIGCV
Trigger: GACGCAGCCAATCTGTGACCACGATTCCTCCCACAG...CCAATCTGTGACCACGATTCCTCCCACAGATGCCTCCTGCTTGGATTCTGAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR TCA 90 bp GAACCATCCTTGAAAGTCATGCTTTACAGATCTCTGACCACTCAGAATCCAAGCCCAGCAGCCGCCCTTTaGTCTGCGGCCACAGCGAGT +
Preference number: 4 (lower is better)
Translates to: EPSLKVMLYRSLTTQNPSPAAAL*SAATAS
Trigger: ACTCGCTGTGGCCGCAGATCAAAGGGCGGCTGCTGG...GCTTGGATTCTGAGTGGTCAGAGATCTGTAAAGCATGACTTTCAAGGATGGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR TCA 90 bp CTAAGAACCATCCTTGAAAGTCATGCTTTACAGATCTCTGACCACTCAGAATCCGTGGGGTCTGTGCAGTaGGGTCGGCCACCTGGACGG +
Preference number: 4 (lower is better)
Translates to: LRTILESHALQISDHSESVGSVQ*GRPPGR
Trigger: CCGTCCAGGTGGCCGACCTCACTGCACAGACCCCAC...GGATTCTGAGTGGTCAGAGATCTGTAAAGCATGACTTTCAAGGATGGTTCTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR GCA 90 bp GAACCATCCTTGAAAGTCATGCTTTACAGATCTCTGACCACTCAGAATCCAAGCACGCTGATGGGCTGCTaGCCCTCCAGCTCCACCGCA +
Preference number: 4 (lower is better)
Translates to: EPSLKVMLYRSLTTQNPSTLMGC*PSSSTA
Trigger: TGCGGTGGAGCTGGAGGGGCAGCAGCCCATCAGCGT...GCTTGGATTCTGAGTGGTCAGAGATCTGTAAAGCATGACTTTCAAGGATGGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR GCA 90 bp CACAGTGTAGAACCAGTAGAACTAAGAATACTCCAGCCTGTGCCCCCACCCAGCAGGTTCTGGGCCACCTaGTTCCACAGGTGTTTGAAG +
Preference number: 4 (lower is better)
Translates to: HSVEPVELRILQPVPPPSRFWAT*FHRCLK
Trigger: CTTCAAACACCTGTGGAAGCAGGTGGCCCAGAACCT...GCTGGGTGGGGGCACAGGCTGGAGTATTCTTAGTTCTACTGGTTCTACACTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR GCA 90 bp ACCATCCTTGAAAGTCATGCTTTACAGATCTCTGACCACTCAGAATCCAAGCAGAGCCGCCCTTTGATCTaGGGCCACAGCGAGTGCGGC +
Preference number: 4 (lower is better)
Translates to: TILESHALQISDHSESKQSRPLI*GHSECG
Trigger: GCCGCACTCGCTGTGGCCGCAGATCAAAGGGCGGCT...CTGCTTGGATTCTGAGTGGTCAGAGATCTGTAAAGCATGACTTTCAAGGATGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR GCA 90 bp GGTCATACCTCCCACATGGCCGATGGGATAAGGGGTAGTGGCCATGTTCCTCCCCTTGGCATCAATCACTaGAGAGAAGAAGGTCCCAAA +
Preference number: 4 (lower is better)
Translates to: GHTSHMADGIRGSGHVPPLGINH*REEGPK
Trigger: TTTGGGACCTTCTTCTCTGCAGTGATTGATGCCAAG...GGGAGGAACATGGCCACTACCCCTTATCCCATCGGCCATGTGGGAGGTATGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR GCA 90 bp CACAGTCCCCTAAGAACCATCCTTGAAAGTCATGCTTTACAGATCTCTGACCACCCGGGTGGGGTCCCATaGAGGCATCCTGGAGGAAGA +
Preference number: 4 (lower is better)
Translates to: HSPLRTILESHALQISDHPGGVP*RHPGGR
Trigger: TCTTCCTCCAGGATGCCTGCATGGGACCCCACCCGG...GTGGTCAGAGATCTGTAAAGCATGACTTTCAAGGATGGTTCTTAGGGGACTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp GTGGGGTCCCATGCAGGCATCCTGGAGGAAGACCCAACACTTTCACAGTCCCCTCTGCATAACAGAACTTaGCCACCTTATGTCCATGGT +
Preference number: 4 (lower is better)
Translates to: VGSHAGILEEDPTLSQSPLHNRT*PPYVHG
Trigger: ACCATGGACATAAGGTGGCCAAGTTCTGTTATGCAG...AGGGGACTGTGAAAGTGTTGGGTCTTCCTCCAGGATGCCTGCATGGGACCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp ATGACACATATCCTGGAAGGACACAGAACCCACACCCAGCCCAGCTGGCACCAGTACGGGCAAAGGACTTaGCATCAATCACTGCAGAGA +
Preference number: 4 (lower is better)
Translates to: MTHILEGHRTHTQPSWHQYGQRT*HQSLQR
Trigger: TCTCTGCAGTGATTGATGCCAAGTCCTTTGCCCGTA...CTGGTGCCAGCTGGGCTGGGTGTGGGTTCTGTGTCCTTCCAGGATATGTGTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290597.9
ENST00000375341.8
CDS-3UTR CCA 90 bp ACCATCCTTGAAAGTCATGCTTTACAGATCTCTGACCACTCAGAATCCAAGCAGCAGACAGCTGGACGGTaGAGCCCGAGAGGGGCTCAC +
Preference number: 4 (lower is better)
Translates to: TILESHALQISDHSESKQQTAGR*SPRGAH
Trigger: GTGAGCCCCTCTCGGGCTCCACCGTCCAGCTGTCTG...CTGCTTGGATTCTGAGTGGTCAGAGATCTGTAAAGCATGACTTTCAAGGATGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp ACCATCCTTGAAAGTCATGCTTTACAGATCTCTGACCACTCAGAATCCAAGCAGGGACGGACAGACAGCTaGACGGTGGAGCCCGAGAGG +
Preference number: 4 (lower is better)
Translates to: TILESHALQISDHSESKQGRTDS*TVEPER
Trigger: CCTCTCGGGCTCCACCGTCCAGCTGTCTGTCCGTCC...CTGCTTGGATTCTGAGTGGTCAGAGATCTGTAAAGCATGACTTTCAAGGATGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp CACAGTCCCCTAAGAACCATCCTTGAAAGTCATGCTTTACAGATCTCTGACCACACCCACCCCCATCCATaGGCCAGTGGCACTTGGGGA +
Preference number: 4 (lower is better)
Translates to: HSPLRTILESHALQISDHTHPHP*ASGTWG
Trigger: TCCCCAAGTGCCACTGGCCCATGGATGGGGGTGGGT...GTGGTCAGAGATCTGTAAAGCATGACTTTCAAGGATGGTTCTTAGGGGACTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp TCCTGGAGGAAGACCCAACACTTTCACAGTCCCCTAAGAACCATCCTTGAAAGTTCTAAGGTGTGTGGCTaGGGACAGGGGCCTACTGGC +
Preference number: 4 (lower is better)
Translates to: SWRKTQHFHSPLRTILESSKVCG*GQGPTG
Trigger: GCCAGTAGGCCCCTGTCCCCAGCCACACACCTTAGA...ACTTTCAAGGATGGTTCTTAGGGGACTGTGAAAGTGTTGGGTCTTCCTCCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR TCA 90 bp GAACCATCCTTGAAAGTCATGCTTTACAGATCTCTGACCACTCAGAATCCAAGCAGAACACTGCCCCCGTaGGGCCATAGCTGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: EPSLKVMLYRSLTTQNPSRTLPP*GHSWWC
Trigger: GCACCACCAGCTATGGCCTCACGGGGGCAGTGTTCT...GCTTGGATTCTGAGTGGTCAGAGATCTGTAAAGCATGACTTTCAAGGATGGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR GCA 90 bp TTAAGTAACAGGCATTTTATTGGGTGGCATCTGAGCAAATCCCATTGCCACCTCCGAGGATCTCAGCCCTaGGCGGCCCACTCAGCATGT +
Preference number: 4 (lower is better)
Translates to: LSNRHFIGWHLSKSHCHLRGSQP*AAHSAC
Trigger: ACATGCTGAGTGGGCCGCGCAGGGCTGAGATCCTCG...GAGGTGGCAATGGGATTTGCTCAGATGCCACCCAATAAAATGCCTGTTACTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290597.9
ENST00000375341.8
CDS-3UTR GCA 90 bp CTAAGAACCATCCTTGAAAGTCATGCTTTACAGATCTCTGACCACTCAGAATCCGACCCCGGTACACCGTaGTGTTGGTGCTCGGGGGCA +
Preference number: 4 (lower is better)
Translates to: LRTILESHALQISDHSESDPGTP*CWCSGA
Trigger: TGCCCCCGAGCACCAACAGCACGGTGTACCGGGGTC...GGATTCTGAGTGGTCAGAGATCTGTAAAGCATGACTTTCAAGGATGGTTCTTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR GCA 90 bp TTAAGTAACAGGCATTTTATTGGGTGGCATCTGAGCAAATCCCATTGCCACCTCCCGGGTGGGGTCCCATaGAGGCATCCTGGAGGAAGA +
Preference number: 4 (lower is better)
Translates to: LSNRHFIGWHLSKSHCHLPGGVP*RHPGGR
Trigger: TCTTCCTCCAGGATGCCTGCATGGGACCCCACCCGG...GAGGTGGCAATGGGATTTGCTCAGATGCCACCCAATAAAATGCCTGTTACTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290597.9
ENST00000375341.8
CDS-3UTR GCA 90 bp CACAGTCCCCTAAGAACCATCCTTGAAAGTCATGCTTTACAGATCTCTGACCACGGCAGAGGGAGAACCTaGCAGGCACCAGGGTCATAC +
Preference number: 4 (lower is better)
Translates to: HSPLRTILESHALQISDHGRGRT*QAPGSY
Trigger: GTATGACCCTGGTGCCTGGCAGGTTCTCCCTCTGCC...GTGGTCAGAGATCTGTAAAGCATGACTTTCAAGGATGGTTCTTAGGGGACTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR GCA 90 bp TCCTGGAGGAAGACCCAACACTTTCACAGTCCCCTAAGAACCATCCTTGAAAGTGTGAGTGGTGAGGTTTaGCAAGGGGCCCAGAATGGC +
Preference number: 4 (lower is better)
Translates to: SWRKTQHFHSPLRTILESVSGEV*QGAQNG
Trigger: GCCATTCTGGGCCCCTTGGCAAACCTCACCACTCAC...ACTTTCAAGGATGGTTCTTAGGGGACTGTGAAAGTGTTGGGTCTTCCTCCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp CACTCAGAATCCAAGCAGGAGGCATCTGTGGGAGGAATCGTGGTCACAGATTGGTTAAAAGGCGACACTTaGTACTGCACGTCCGACGTC +
Preference number: 4 (lower is better)
Translates to: HSESKQEASVGGIVVTDWLKGDT*YCTSDV
Trigger: GACGTCGGACGTGCAGTACCAAGTGTCGCCTTTTAA...CCAATCTGTGACCACGATTCCTCCCACAGATGCCTCCTGCTTGGATTCTGAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp CCCATGCAGGCATCCTGGAGGAAGACCCAACACTTTCACAGTCCCCTAAGAACCGCCACCTTATGTCCATaGTTAAAAGGCGACACTTGG +
Preference number: 4 (lower is better)
Translates to: PMQASWRKTQHFHSPLRTATLCP*LKGDTW
Trigger: CCAAGTGTCGCCTTTTAACCATGGACATAAGGTGGC...GGTTCTTAGGGGACTGTGAAAGTGTTGGGTCTTCCTCCAGGATGCCTGCATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp CACAGTCCCCTAAGAACCATCCTTGAAAGTCATGCTTTACAGATCTCTGACCACCCCAACCCCGCCATGTaGTGCAGACCGGGAATCACA +
Preference number: 4 (lower is better)
Translates to: HSPLRTILESHALQISDHPNPAM*CRPGIT
Trigger: TGTGATTCCCGGTCTGCACCACATGGCGGGGTTGGG...GTGGTCAGAGATCTGTAAAGCATGACTTTCAAGGATGGTTCTTAGGGGACTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR TCA 90 bp CTAAGAACCATCCTTGAAAGTCATGCTTTACAGATCTCTGACCACTCAGAATCCAGAACACTGCCCCCGTaGGGCCATAGCTGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: LRTILESHALQISDHSESRTLPP*GHSWWC
Trigger: GCACCACCAGCTATGGCCTCACGGGGGCAGTGTTCT...GGATTCTGAGTGGTCAGAGATCTGTAAAGCATGACTTTCAAGGATGGTTCTTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR GCA 90 bp TCCTGGAGGAAGACCCAACACTTTCACAGTCCCCTAAGAACCATCCTTGAAAGTTCCTTCAAGGCCTTTTaGAGGGCATCTCGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: SWRKTQHFHSPLRTILESSFKAF*RASRSG
Trigger: CCCTGAGCGAGATGCCCTGCAAAAGGCCTTGAAGGA...ACTTTCAAGGATGGTTCTTAGGGGACTGTGAAAGTGTTGGGTCTTCCTCCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR GCA 90 bp TCCTGGAGGAAGACCCAACACTTTCACAGTCCCCTAAGAACCATCCTTGAAAGTGGTGAGGAGCGTGCGTaGTCCAGCCACTTCTTGATA +
Preference number: 4 (lower is better)
Translates to: SWRKTQHFHSPLRTILESGEERA*SSHFLI
Trigger: TATCAAGAAGTGGCTGGAGCACGCACGCTCCTCACC...ACTTTCAAGGATGGTTCTTAGGGGACTGTGAAAGTGTTGGGTCTTCCTCCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290597.9
ENST00000375341.8
CDS-3UTR GCA 90 bp GAACCATCCTTGAAAGTCATGCTTTACAGATCTCTGACCACTCAGAATCCAAGCGCTCCTGAGGGTCCTTaGTCTCCACGATGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: EPSLKVMLYRSLTTQNPSAPEGP*SPRCRA
Trigger: AGCCCTGCATCGTGGAGAGCAAGGACCCTCAGGAGC...GCTTGGATTCTGAGTGGTCAGAGATCTGTAAAGCATGACTTTCAAGGATGGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290597.9
ENST00000375341.8
CDS-3UTR GCA 90 bp AGAACCATCCTTGAAAGTCATGCTTTACAGATCTCTGACCACTCAGAATCCAAGGAATACTCCAGCCTGTaGCCCCACCCAGCCACCTGC +
Preference number: 4 (lower is better)
Translates to: RTILESHALQISDHSESKEYSSL*PHPATC
Trigger: GCAGGTGGCTGGGTGGGGGCACAGGCTGGAGTATTC...CTTGGATTCTGAGTGGTCAGAGATCTGTAAAGCATGACTTTCAAGGATGGTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR GCA 90 bp CTAAGAACCATCCTTGAAAGTCATGCTTTACAGATCTCTGACCACTCAGAATCCCTGGAGTGGGGTCTGTaGAGTGAGGTCGGCCACCTG +
Preference number: 4 (lower is better)
Translates to: LRTILESHALQISDHSESLEWGL*SEVGHL
Trigger: CAGGTGGCCGACCTCACTGCACAGACCCCACTCCAG...GGATTCTGAGTGGTCAGAGATCTGTAAAGCATGACTTTCAAGGATGGTTCTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp TTAAGTAACAGGCATTTTATTGGGTGGCATCTGAGCAAATCCCATTGCCACCTCAACCGGTCCAGGTTCTaGGCCACCTGCTTCCACAGG +
Preference number: 4 (lower is better)
Translates to: LSNRHFIGWHLSKSHCHLNRSRF*ATCFHR
Trigger: CCTGTGGAAGCAGGTGGCCCAGAACCTGGACCGGTT...GAGGTGGCAATGGGATTTGCTCAGATGCCACCCAATAAAATGCCTGTTACTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290597.9
ENST00000375341.8
CDS-3UTR CCA 90 bp TCCTGGAGGAAGACCCAACACTTTCACAGTCCCCTAAGAACCATCCTTGAAAGTTGCCCCGGCCCCTCATaGGAAATGACACATATCCTG +
Preference number: 4 (lower is better)
Translates to: SWRKTQHFHSPLRTILESCPGPS*EMTHIL
Trigger: CAGGATATGTGTCATTTCCCATGAGGGGCCGGGGCA...ACTTTCAAGGATGGTTCTTAGGGGACTGTGAAAGTGTTGGGTCTTCCTCCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp TCCTGGAGGAAGACCCAACACTTTCACAGTCCCCTAAGAACCATCCTTGAAAGTCCAGAGCCTGAGGCATaGGAGAGGCCAGAATACAGT +
Preference number: 4 (lower is better)
Translates to: SWRKTQHFHSPLRTILESPEPEA*ERPEYS
Trigger: ACTGTATTCTGGCCTCTCCCATGCCTCAGGCTCTGG...ACTTTCAAGGATGGTTCTTAGGGGACTGTGAAAGTGTTGGGTCTTCCTCCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp TCCTGGAGGAAGACCCAACACTTTCACAGTCCCCTAAGAACCATCCTTGAAAGTAGCAGGAGGCATCTGTaGGAGGAATCGTGGTCACAG +
Preference number: 4 (lower is better)
Translates to: SWRKTQHFHSPLRTILESSRRHL*EESWSQ
Trigger: CTGTGACCACGATTCCTCCCACAGATGCCTCCTGCT...ACTTTCAAGGATGGTTCTTAGGGGACTGTGAAAGTGTTGGGTCTTCCTCCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR TCA 90 bp ACCATCCTTGAAAGTCATGCTTTACAGATCTCTGACCACTCAGAATCCAAGCAGGGTGCTCTGAGCTGGTaGCAGTGTCCCCAAATAGGG +
Preference number: 4 (lower is better)
Translates to: TILESHALQISDHSESKQGALSW*QCPQIG
Trigger: CCCTATTTGGGGACACTGTCACCAGCTCAGAGCACC...CTGCTTGGATTCTGAGTGGTCAGAGATCTGTAAAGCATGACTTTCAAGGATGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR TCA 90 bp GAACCATCCTTGAAAGTCATGCTTTACAGATCTCTGACCACTCAGAATCCAAGCGGTGCTCTGAGCTGGTaGCAGTGTCCCCAAATAGGG +
Preference number: 4 (lower is better)
Translates to: EPSLKVMLYRSLTTQNPSGALSW*QCPQIG
Trigger: CCCTATTTGGGGACACTGTCACCAGCTCAGAGCACC...GCTTGGATTCTGAGTGGTCAGAGATCTGTAAAGCATGACTTTCAAGGATGGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR TCA 90 bp CACTTTCACAGTCCCCTAAGAACCATCCTTGAAAGTCATGCTTTACAGATCTCTCAGGGTCGCCCACTTTaGTCCGACTGTGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: HFHSPLRTILESHALQISQGRPL*SDCAPP
Trigger: TGGAGGAGCACAGTCGGATCAAAGTGGGCGACCCTG...AGAGATCTGTAAAGCATGACTTTCAAGGATGGTTCTTAGGGGACTGTGAAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR TCA 90 bp CAGTGTAGAACCAGTAGAACTAAGAATACTCCAGCCTGTGCCCCCACCCAGCCATGCTTTACAGATCTCTaGCCACTCAGAATCCAAGCA +
Preference number: 4 (lower is better)
Translates to: QCRTSRTKNTPACAPTQPCFTDL*PLRIQA
Trigger: TGCTTGGATTCTGAGTGGTCAGAGATCTGTAAAGCA...TGGCTGGGTGGGGGCACAGGCTGGAGTATTCTTAGTTCTACTGGTTCTACACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR TCA 90 bp ACCATCCTTGAAAGTCATGCTTTACAGATCTCTGACCACTCAGAATCCAAGCAGTCTCAAACCAGAGCCTaGGGCATGGGAGAGGCCAGA +
Preference number: 4 (lower is better)
Translates to: TILESHALQISDHSESKQSQTRA*GMGEAR
Trigger: TCTGGCCTCTCCCATGCCTCAGGCTCTGGTTTGAGA...CTGCTTGGATTCTGAGTGGTCAGAGATCTGTAAAGCATGACTTTCAAGGATGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR TCA 90 bp AGAACCATCCTTGAAAGTCATGCTTTACAGATCTCTGACCACTCAGAATCCAAGAGCCTCTGTGAGTGGTaGGGTTTGCCAAGGGGCCCA +
Preference number: 4 (lower is better)
Translates to: RTILESHALQISDHSESKSLCEW*GLPRGP
Trigger: TGGGCCCCTTGGCAAACCTCACCACTCACAGAGGCT...CTTGGATTCTGAGTGGTCAGAGATCTGTAAAGCATGACTTTCAAGGATGGTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR GCA 90 bp CACAGTCCCCTAAGAACCATCCTTGAAAGTCATGCTTTACAGATCTCTGACCACCCTTGCTCTCCACGATaGAGGGCTCCACAAAGTAGC +
Preference number: 4 (lower is better)
Translates to: HSPLRTILESHALQISDHPCSPR*RAPQSS
Trigger: GCTACTTTGTGGAGCCCTGCATCGTGGAGAGCAAGG...GTGGTCAGAGATCTGTAAAGCATGACTTTCAAGGATGGTTCTTAGGGGACTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290597.9
ENST00000375341.8
CDS-3UTR GCA 90 bp CACTTTCACAGTCCCCTAAGAACCATCCTTGAAAGTCATGCTTTACAGATCTCTGGCCATAGCTGGTGGTaGTGTCAACCAGCTGCAGCG +
Preference number: 4 (lower is better)
Translates to: HFHSPLRTILESHALQISGHSWW*CQPAAA
Trigger: CGCTGCAGCTGGTTGACAGCACCACCAGCTATGGCC...AGAGATCTGTAAAGCATGACTTTCAAGGATGGTTCTTAGGGGACTGTGAAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR GCA 90 bp ACCATCCTTGAAAGTCATGCTTTACAGATCTCTGACCACTCAGAATCCAAGCAGAACCCCGCCATGTGGTaGAGACCGGGAATCACACAG +
Preference number: 4 (lower is better)
Translates to: TILESHALQISDHSESKQNPAMW*RPGITQ
Trigger: CTGTGTGATTCCCGGTCTGCACCACATGGCGGGGTT...CTGCTTGGATTCTGAGTGGTCAGAGATCTGTAAAGCATGACTTTCAAGGATGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp CACTTTCACAGTCCCCTAAGAACCATCCTTGAAAGTCATGCTTTACAGATCTCTGTCCCACCATGGTCTTaGCGAGGATCTCAGCCCTGC +
Preference number: 4 (lower is better)
Translates to: HFHSPLRTILESHALQISVPPWS*RGSQPC
Trigger: GCAGGGCTGAGATCCTCGCCAAGACCATGGTGGGAC...AGAGATCTGTAAAGCATGACTTTCAAGGATGGTTCTTAGGGGACTGTGAAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp ACCATCCTTGAAAGTCATGCTTTACAGATCTCTGACCACTCAGAATCCAAGCAGCAAGCAGGAGGCATCTaGACGGACAGACAGCTGGAC +
Preference number: 4 (lower is better)
Translates to: TILESHALQISDHSESKQQAGGI*TDRQLD
Trigger: GTCCAGCTGTCTGTCCGTCCAGATGCCTCCTGCTTG...CTGCTTGGATTCTGAGTGGTCAGAGATCTGTAAAGCATGACTTTCAAGGATGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290597.9
CDS-3UTR CCA 90 bp CTAAGAACCATCCTTGAAAGTCATGCTTTACAGATCTCTGACCACTCAGAATCCGTCACCATGGCACAGTaGTGGCTGAGCTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: LRTILESHALQISDHSESVTMAQ*WLSSCR
Trigger: CCTGCAGGAGCTCAGCCACCACTGTGCCATGGTGAC...GGATTCTGAGTGGTCAGAGATCTGTAAAGCATGACTTTCAAGGATGGTTCTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR TCA 90 bp GAACCATCCTTGAAAGTCATGCTTTACAGATCTCTGACCACTCAGAATCCAAGCACCGGAAGAAGTCGATaGGTTCCGCTGCAGCGTCAA +
Preference number: 4 (lower is better)
Translates to: EPSLKVMLYRSLTTQNPSTGRSR*VPLQRQ
Trigger: TTGACGCTGCAGCGGAACTCATCGACTTCTTCCGGT...GCTTGGATTCTGAGTGGTCAGAGATCTGTAAAGCATGACTTTCAAGGATGGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR TCA 90 bp CACAGTCCCCTAAGAACCATCCTTGAAAGTCATGCTTTACAGATCTCTGACCACCAGTGGACTTGTCGTTaGTGTAGAAGTTGCCGGCAG +
Preference number: 4 (lower is better)
Translates to: HSPLRTILESHALQISDHQWTCR*CRSCRQ
Trigger: CTGCCGGCAACTTCTACATCAACGACAAGTCCACTG...GTGGTCAGAGATCTGTAAAGCATGACTTTCAAGGATGGTTCTTAGGGGACTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR TCA 90 bp CACAGTCCCCTAAGAACCATCCTTGAAAGTCATGCTTTACAGATCTCTGACCACAAAAGAATGGGCCAGTaGGGGACTGGTCCACACAGA +
Preference number: 4 (lower is better)
Translates to: HSPLRTILESHALQISDHKRMGQ*GTGPHR
Trigger: TCTGTGTGGACCAGTCCCTCACTGGCCCATTCTTTT...GTGGTCAGAGATCTGTAAAGCATGACTTTCAAGGATGGTTCTTAGGGGACTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR GCA 90 bp CACAGTCCCCTAAGAACCATCCTTGAAAGTCATGCTTTACAGATCTCTGACCACTTGATGCCACAGAGGTaGTCTGAGCTGGTGACAGTG +
Preference number: 4 (lower is better)
Translates to: HSPLRTILESHALQISDHLMPQR*SELVTV
Trigger: CACTGTCACCAGCTCAGAGCACCTCTGTGGCATCAA...GTGGTCAGAGATCTGTAAAGCATGACTTTCAAGGATGGTTCTTAGGGGACTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR GCA 90 bp GAACCATCCTTGAAAGTCATGCTTTACAGATCTCTGACCACTCAGAATCCAAGCACCTTTGTGGCCTCCTaGACGACGTCCTTATCCTGG +
Preference number: 4 (lower is better)
Translates to: EPSLKVMLYRSLTTQNPSTFVAS*TTSLSW
Trigger: CCAGGATAAGGACGTCGTGCAGGAGGCCACAAAGGT...GCTTGGATTCTGAGTGGTCAGAGATCTGTAAAGCATGACTTTCAAGGATGGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR GCA 90 bp CTAAGAACCATCCTTGAAAGTCATGCTTTACAGATCTCTGACCACTCAGAATCCAACCCCGCCATGTGGTaGAGACCGGGAATCACACAG +
Preference number: 4 (lower is better)
Translates to: LRTILESHALQISDHSESNPAMW*RPGITQ
Trigger: CTGTGTGATTCCCGGTCTGCACCACATGGCGGGGTT...GGATTCTGAGTGGTCAGAGATCTGTAAAGCATGACTTTCAAGGATGGTTCTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp CTAAGAACCATCCTTGAAAGTCATGCTTTACAGATCTCTGACCACTCAGAATCCGCCTTCAGGAAGATCTaGGCCCGGTCTGCAATAGGC +
Preference number: 4 (lower is better)
Translates to: LRTILESHALQISDHSESAFRKI*ARSAIG
Trigger: GCCTATTGCAGACCGGGCCCAGATCTTCCTGAAGGC...GGATTCTGAGTGGTCAGAGATCTGTAAAGCATGACTTTCAAGGATGGTTCTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp AGAACCATCCTTGAAAGTCATGCTTTACAGATCTCTGACCACTCAGAATCCAAGCATAGCTGGCCAGCATaGCAGTGTCACTGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: RTILESHALQISDHSESKHSWPA*QCHWAS
Trigger: GGAAGCCCAGTGACACTGCCATGCTGGCCAGCTATG...CTTGGATTCTGAGTGGTCAGAGATCTGTAAAGCATGACTTTCAAGGATGGTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp CACTTTCACAGTCCCCTAAGAACCATCCTTGAAAGTCATGCTTTACAGATCTCTCACGCGGAACACTTCTaGCCACCGTACTCGAAGGCT +
Preference number: 4 (lower is better)
Translates to: HFHSPLRTILESHALQISHAEHF*PPYSKA
Trigger: AGCCTTCGAGTACGGTGGCCAGAAGTGTTCCGCGTG...AGAGATCTGTAAAGCATGACTTTCAAGGATGGTTCTTAGGGGACTGTGAAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp CTAAGAACCATCCTTGAAAGTCATGCTTTACAGATCTCTGACCACTCAGAATCCTCCTCAGCACCTTTGTaGCCTCCTGCACGACGTCCT +
Preference number: 4 (lower is better)
Translates to: LRTILESHALQISDHSESSSAPL*PPARRP
Trigger: AGGACGTCGTGCAGGAGGCCACAAAGGTGCTGAGGA...GGATTCTGAGTGGTCAGAGATCTGTAAAGCATGACTTTCAAGGATGGTTCTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp TTAAGTAACAGGCATTTTATTGGGTGGCATCTGAGCAAATCCCATTGCCACCTCTGCCCCGGCCCCTCATaGGAAATGACACATATCCTG +
Preference number: 4 (lower is better)
Translates to: LSNRHFIGWHLSKSHCHLCPGPS*EMTHIL
Trigger: CAGGATATGTGTCATTTCCCATGAGGGGCCGGGGCA...GAGGTGGCAATGGGATTTGCTCAGATGCCACCCAATAAAATGCCTGTTACTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000290597.9
ENST00000375341.8
CDS-3UTR TCA 90 bp CACAGTCCCCTAAGAACCATCCTTGAAAGTCATGCTTTACAGATCTCTGACCACCCTCAATGGCTTTGTTaGGCAGGCTCTTGTCTGCAT +
Preference number: 4 (lower is better)
Translates to: HSPLRTILESHALQISDHPQWLC*AGSCLH
Trigger: ATGCAGACAAGAGCCTGCTCAACAAAGCCATTGAGG...GTGGTCAGAGATCTGTAAAGCATGACTTTCAAGGATGGTTCTTAGGGGACTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR TCA 90 bp GAACCATCCTTGAAAGTCATGCTTTACAGATCTCTGACCACTCAGAATCCAAGCCAGTGGACTTGTCGTTaGTGTAGAAGTTGCCGGCAG +
Preference number: 4 (lower is better)
Translates to: EPSLKVMLYRSLTTQNPSQWTCR*CRSCRQ
Trigger: CTGCCGGCAACTTCTACATCAACGACAAGTCCACTG...GCTTGGATTCTGAGTGGTCAGAGATCTGTAAAGCATGACTTTCAAGGATGGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR GCA 90 bp CACTTTCACAGTCCCCTAAGAACCATCCTTGAAAGTCATGCTTTACAGATCTCTCCCACTCAGCATGTCTaGCGCCTTCAGGAAGATCTG +
Preference number: 4 (lower is better)
Translates to: HFHSPLRTILESHALQISPTQHV*RLQEDL
Trigger: CAGATCTTCCTGAAGGCGGCAGACATGCTGAGTGGG...AGAGATCTGTAAAGCATGACTTTCAAGGATGGTTCTTAGGGGACTGTGAAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR GCA 90 bp CACTTTCACAGTCCCCTAAGAACCATCCTTGAAAGTCATGCTTTACAGATCTCTGTCGATGAGTTCCGCTaGAGCGTCAATCTCCGCTTG +
Preference number: 4 (lower is better)
Translates to: HFHSPLRTILESHALQISVDEFR*SVNLRL
Trigger: CAAGCGGAGATTGACGCTGCAGCGGAACTCATCGAC...AGAGATCTGTAAAGCATGACTTTCAAGGATGGTTCTTAGGGGACTGTGAAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR GCA 90 bp CACTTTCACAGTCCCCTAAGAACCATCCTTGAAAGTCATGCTTTACAGATCTCTACGTCGGCCGAGCGGTaGACGAAGTGGAAGTTCTTT +
Preference number: 4 (lower is better)
Translates to: HFHSPLRTILESHALQISTSAER*TKWKFF
Trigger: AAAGAACTTCCACTTCGTGCACCGCTCGGCCGACGT...AGAGATCTGTAAAGCATGACTTTCAAGGATGGTTCTTAGGGGACTGTGAAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR GCA 90 bp ACCATCCTTGAAAGTCATGCTTTACAGATCTCTGACCACTCAGAATCCAAGCAGGTGCTGTCAACCAGCTaGAGCGTCTCCTTGTACTTG +
Preference number: 4 (lower is better)
Translates to: TILESHALQISDHSESKQVLSTS*SVSLYL
Trigger: CAAGTACAAGGAGACGCTGCAGCTGGTTGACAGCAC...CTGCTTGGATTCTGAGTGGTCAGAGATCTGTAAAGCATGACTTTCAAGGATGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp CACAGTCCCCTAAGAACCATCCTTGAAAGTCATGCTTTACAGATCTCTGACCACTTAAAAGGCGACACTTaGTACTGCACGTCCGACGTC +
Preference number: 4 (lower is better)
Translates to: HSPLRTILESHALQISDHLKGDT*YCTSDV
Trigger: GACGTCGGACGTGCAGTACCAAGTGTCGCCTTTTAA...GTGGTCAGAGATCTGTAAAGCATGACTTTCAAGGATGGTTCTTAGGGGACTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp CTAAGAACCATCCTTGAAAGTCATGCTTTACAGATCTCTGACCACTCAGAATCCAGCAGGAGGCATCTGTaGGAGGAATCGTGGTCACAG +
Preference number: 4 (lower is better)
Translates to: LRTILESHALQISDHSESSRRHL*EESWSQ
Trigger: CTGTGACCACGATTCCTCCCACAGATGCCTCCTGCT...GGATTCTGAGTGGTCAGAGATCTGTAAAGCATGACTTTCAAGGATGGTTCTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp CACAGTCCCCTAAGAACCATCCTTGAAAGTCATGCTTTACAGATCTCTGACCACGCCCGAAGATCTCCTTaGCATCAATCACTGCAGAGA +
Preference number: 4 (lower is better)
Translates to: HSPLRTILESHALQISDHARRSP*HQSLQR
Trigger: TCTCTGCAGTGATTGATGCCAAGGAGATCTTCGGGC...GTGGTCAGAGATCTGTAAAGCATGACTTTCAAGGATGGTTCTTAGGGGACTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538839.5
CDS-3UTR TCA 90 bp TTAAGTAACAGGCATTTTATTGGGTGGCATCTGAGCAAATCCCATTGCCACCTCCCTCAATGGCTTTGTTaGGCAGGCTCTTGTCTGCAT +
Preference number: 4 (lower is better)
Translates to: LSNRHFIGWHLSKSHCHLPQWLC*AGSCLH
Trigger: ATGCAGACAAGAGCCTGCTCAACAAAGCCATTGAGG...GAGGTGGCAATGGGATTTGCTCAGATGCCACCCAATAAAATGCCTGTTACTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290597.9
ENST00000375341.8
CDS-3UTR TCA 90 bp CTAAGAACCATCCTTGAAAGTCATGCTTTACAGATCTCTGACCACTCAGAATCCGCCCCTCATGGGAAATaGCACATATCCTGGAAGGAC +
Preference number: 4 (lower is better)
Translates to: LRTILESHALQISDHSESAPHGK*HISWKD
Trigger: GTCCTTCCAGGATATGTGTCATTTCCCATGAGGGGC...GGATTCTGAGTGGTCAGAGATCTGTAAAGCATGACTTTCAAGGATGGTTCTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR TCA 90 bp ACCATCCTTGAAAGTCATGCTTTACAGATCTCTGACCACTCAGAATCCAAGCAGTTATTGGGTGGCATCTaGGCAAATCCCATTGCCACC +
Preference number: 4 (lower is better)
Translates to: TILESHALQISDHSESKQLLGGI*ANPIAT
Trigger: GGTGGCAATGGGATTTGCTCAGATGCCACCCAATAA...CTGCTTGGATTCTGAGTGGTCAGAGATCTGTAAAGCATGACTTTCAAGGATGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR GCA 90 bp ACCATCCTTGAAAGTCATGCTTTACAGATCTCTGACCACTCAGAATCCAAGCAGACCTGGAGTAAGGCATaGCAGCATCTAAGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: TILESHALQISDHSESKQTWSKA*QHLRCV
Trigger: CACACACCTTAGATGCTGGCATGCCTTACTCCAGGT...CTGCTTGGATTCTGAGTGGTCAGAGATCTGTAAAGCATGACTTTCAAGGATGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CCA 90 bp AGAACCATCCTTGAAAGTCATGCTTTACAGATCTCTGACCACTCAGAATCCAAGGCGTCAATCTCCGCTTaGATCACGGTCTTACCCTGT +
Preference number: 4 (lower is better)
Translates to: RTILESHALQISDHSESKASISA*ITVLPC
Trigger: ACAGGGTAAGACCGTGATCCAAGCGGAGATTGACGC...CTTGGATTCTGAGTGGTCAGAGATCTGTAAAGCATGACTTTCAAGGATGGTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
3UTR CAA 72 bp CAGGCATTTTATTGGGTGGCATCTGAGCAAATCCCATaGCCACCTCACAGTGTAGAACCAGTAGAACTAAGA +
Preference number: 4 (lower is better)
Translates to: QAFYWVASEQIP*PPHSVEPVELR
Trigger: TCTTAGTTCTACTGGTTCTACACTGTGAGGTGGCAATGGGATTTGCTCAGATGCCACCCAATAAAATGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR TCA 90 bp ACCATCCTTGAAAGTCATGCTTTACAGATCTCTGACCACTCAGAATCCAAGCAGCCTAAGAACCATCCTTaGAAGTCATGCTTTACAGAT +
Preference number: 4 (lower is better)
Translates to: TILESHALQISDHSESKQPKNHP*KSCFTD
Trigger: ATCTGTAAAGCATGACTTTCAAGGATGGTTCTTAGG...CTGCTTGGATTCTGAGTGGTCAGAGATCTGTAAAGCATGACTTTCAAGGATGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR TCA 90 bp AGAACCATCCTTGAAAGTCATGCTTTACAGATCTCTGACCACTCAGAATCCAAGCCTAAGAACCATCCTTaGAAGTCATGCTTTACAGAT +
Preference number: 4 (lower is better)
Translates to: RTILESHALQISDHSESKPKNHP*KSCFTD
Trigger: ATCTGTAAAGCATGACTTTCAAGGATGGTTCTTAGG...CTTGGATTCTGAGTGGTCAGAGATCTGTAAAGCATGACTTTCAAGGATGGTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS TCA 90 bp GAGACGCGAGCACGCGGAACACTTCTGGCCACCGTACTCGAAGGCTaGGCGGAGGGTCCCGCTCACCACGCTCTCCACGTCGGCCGAGCG +
Preference number: 5 (lower is better)
Translates to: ETRARGTLLATVLEG*AEGPAHHALHVGRA
Trigger: CGCTCGGCCGACGTGGAGAGCGTGGTGAGCGGGACCCTCCGCTCAGCCTTCGAGTACGGTGGCCAGAAGTGTTCCGCGTGCTCGCGTCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538309.5
ENST00000538839.5
CDS GCA 90 bp GAGCGGAGGGTCCCGCTCACCACGCTCTCCACGTCGGCCGAGCGGTaGACGAAGTGGAAGTTCTTTCCGCCGCACTCTCCAGCCAGGCGT +
Preference number: 5 (lower is better)
Translates to: ERRVPLTTLSTSAER*TKWKFFPPHSPARR
Trigger: ACGCCTGGCTGGAGAGTGCGGCGGAAAGAACTTCCACTTCGTGCACCGCTCGGCCGACGTGGAGAGCGTGGTGAGCGGGACCCTCCGCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538309.5
ENST00000538839.5
CDS-3UTR CAA 90 bp ACCCACCCCCATCCATGGGCCAGTGGCACTTGGGGAATGGCCACACCAGCTCCGGGTGCCCCCGCCAGGTaGCCGCCGATTGCAGTGAAG +
Preference number: 5 (lower is better)
Translates to: THPHPWASGTWGMATPAPGAPAR*PPIAVK
Trigger: CTTCACTGCAATCGGCGGCAACCTGGCGGGGGCACC...CGGAGCTGGTGTGGCCATTCCCCAAGTGCCACTGGCCCATGGATGGGGGTGGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS GCA 90 bp CACGTTGCCCATCAGGGCCGGTGCCCCCGCCAGGTTGCCGCCGATTaGAGTGAAGTTAAAGGGCGAGATGGCCGCCACGAAGCCCTCCAG +
Preference number: 5 (lower is better)
Translates to: HVAHQGRCPRQVAAD*SEVKGRDGRHEALQ
Trigger: CTGGAGGGCTTCGTGGCGGCCATCTCGCCCTTTAACTTCACTGCAATCGGCGGCAACCTGGCGGGGGCACCGGCCCTGATGGGCAACGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538309.5
ENST00000538839.5
CDS-3UTR CAA 90 bp CCCACCCCCATCCATGGGCCAGTGGCACTTGGGGAATGGCCACACCAGCTCCGGACGGAGTCATCACACTaGCCCCCGGCCAGGATGGTG +
Preference number: 5 (lower is better)
Translates to: PTPIHGPVALGEWPHQLRTESSH*PPARMV
Trigger: CACCATCCTGGCCGGGGGCAAGTGTGATGACTCCGT...CCGGAGCTGGTGTGGCCATTCCCCAAGTGCCACTGGCCCATGGATGGGGGTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000290597.9
ENST00000375341.8
CDS GCA 90 bp CTCTCGAAGCATCAGGGCCGGTGCCCCCGCCAGGTTGCCGCCGATTaGAGTGAAGTTAAAGGGCGAGATGGCCGCCACGAAGCCCTCCAG +
Preference number: 5 (lower is better)
Translates to: LSKHQGRCPRQVAAD*SEVKGRDGRHEALQ
Trigger: CTGGAGGGCTTCGTGGCGGCCATCTCGCCCTTTAACTTCACTGCAATCGGCGGCAACCTGGCGGGGGCACCGGCCCTGATGCTTCGAGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454547.1
CDS-3UTR CAA 90 bp CCAGCACCCACCCCCATCCATGGGCCAGTGGCACTTGGGGAATGGCCACACCAGGCTAAGACGGGCTCGTaGGCCACCTTCAGGGAGGAG +
Preference number: 5 (lower is better)
Translates to: PAPTPIHGPVALGEWPHQAKTGS*ATFREE
Trigger: CTCCTCCCTGAAGGTGGCCAACGAGCCCGTCTTAGC...CTGGTGTGGCCATTCCCCAAGTGCCACTGGCCCATGGATGGGGGTGGGTGCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CAA 90 bp GCACCAGCACCCACCCCCATCCATGGGCCAGTGGCACTTGGGGAATGGCCACACGCAGGGTCGCCCACTTaGATCCGACTGTGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: APAPTPIHGPVALGEWPHAGSPT*IRLCSS
Trigger: GGAGGAGCACAGTCGGATCAAAGTGGGCGACCCTGC...GTGTGGCCATTCCCCAAGTGCCACTGGCCCATGGATGGGGGTGGGTGCTGGTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CAA 90 bp CAGTGGCACTTGGGGAATGGCCACACCAGCTCCGGGTGGGGTCCCATGCAGGCAACGGAGTCATCACACTaGCCCCCGGCCAGGATGGTG +
Preference number: 5 (lower is better)
Translates to: QWHLGNGHTSSGWGPMQATESSH*PPARMV
Trigger: CACCATCCTGGCCGGGGGCAAGTGTGATGACTCCGT...TGCCTGCATGGGACCCCACCCGGAGCTGGTGTGGCCATTCCCCAAGTGCCACTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000290597.9
ENST00000375341.8
CDS-3UTR CAA 90 bp CCATGGGCCAGTGGCACTTGGGGAATGGCCACACCAGCTCCGGGTGGGGTCCCAGGGCCAATGTCTGCCTaGGCCTGTGTCACCATGGCA +
Preference number: 5 (lower is better)
Translates to: PWASGTWGMATPAPGGVPGPMSA*ACVTMA
Trigger: TGCCATGGTGACACAGGCCAAGGCAGACATTGGCCC...TGGGACCCCACCCGGAGCTGGTGTGGCCATTCCCCAAGTGCCACTGGCCCATGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS CCA 90 bp GCCCTGCGCGGCCCACTCAGCATGTCTGCCGCCTTCAGGAAGATCTaGGCCCGGTCTGCAATAGGCTTCAGGTCCCACTCTTTCCGGGCA +
Preference number: 5 (lower is better)
Translates to: ALRGPLSMSAAFRKI*ARSAIGFRSHSFRA
Trigger: TGCCCGGAAAGAGTGGGACCTGAAGCCTATTGCAGACCGGGCCCAGATCTTCCTGAAGGCGGCAGACATGCTGAGTGGGCCGCGCAGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000432718.1
ENST00000454547.1
ENST00000538309.5
ENST00000538839.5
CDS-3UTR CAA 90 bp ACCAGCACCCACCCCCATCCATGGGCCAGTGGCACTTGGGGAATGGCCACACCAGCTAAGACGGGCTCGTaGGCCACCTTCAGGGAGGAG +
Preference number: 5 (lower is better)
Translates to: TSTHPHPWASGTWGMATPAKTGS*ATFREE
Trigger: CTCCTCCCTGAAGGTGGCCAACGAGCCCGTCTTAGC...TGGTGTGGCCATTCCCCAAGTGCCACTGGCCCATGGATGGGGGTGGGTGCTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CAA 90 bp ACCAGCACCCACCCCCATCCATGGGCCAGTGGCACTTGGGGAATGGCCACACCATTCCATAGGACCACGTaGCCCATCAGGGCCGGTGCC +
Preference number: 5 (lower is better)
Translates to: TSTHPHPWASGTWGMATPFHRTT*PIRAGA
Trigger: GGCACCGGCCCTGATGGGCAACGTGGTCCTATGGAA...TGGTGTGGCCATTCCCCAAGTGCCACTGGCCCATGGATGGGGGTGGGTGCTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS GCA 90 bp CCCACTCAGCATGTCTGCCGCCTTCAGGAAGATCTGGGCCCGGTCTaGAATAGGCTTCAGGTCCCACTCTTTCCGGGCAGCCAGGGCAGC +
Preference number: 5 (lower is better)
Translates to: PTQHVCRLQEDLGPV*NRLQVPLFPGSQGS
Trigger: GCTGCCCTGGCTGCCCGGAAAGAGTGGGACCTGAAGCCTATTGCAGACCGGGCCCAGATCTTCCTGAAGGCGGCAGACATGCTGAGTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000432718.1
ENST00000454547.1
ENST00000538309.5
ENST00000538839.5
CDS GCA 90 bp GGTCTTGGCGAGGATCTCAGCCCTGCGCGGCCCACTCAGCATGTCTaGCGCCTTCAGGAAGATCTGGGCCCGGTCTGCAATAGGCTTCAG +
Preference number: 5 (lower is better)
Translates to: GLGEDLSPARPTQHV*RLQEDLGPVCNRLQ
Trigger: CTGAAGCCTATTGCAGACCGGGCCCAGATCTTCCTGAAGGCGGCAGACATGCTGAGTGGGCCGCGCAGGGCTGAGATCCTCGCCAAGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000432718.1
ENST00000454547.1
ENST00000538309.5
ENST00000538839.5
CDS GCA 90 bp CGGTCTTACCCTGTCCCACCATGGTCTTGGCGAGGATCTCAGCCCTaGGCGGCCCACTCAGCATGTCTGCCGCCTTCAGGAAGATCTGGG +
Preference number: 5 (lower is better)
Translates to: RSYPVPPWSWRGSQP*AAHSACLPPSGRSG
Trigger: CCCAGATCTTCCTGAAGGCGGCAGACATGCTGAGTGGGCCGCGCAGGGCTGAGATCCTCGCCAAGACCATGGTGGGACAGGGTAAGACCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000432718.1
ENST00000454547.1
ENST00000538309.5
ENST00000538839.5
CDS GCA 90 bp CGGTACACCGTGCTGTTGGTGCTCGGGGGCACGCTGATGGGCTGCTaGCCCTCCAGCTCCACCGCATACTTGGCATTGAACCGGAAGAAG +
Preference number: 5 (lower is better)
Translates to: RYTVLLVLGGTLMGC*PSSSTAYLALNRKK
Trigger: CTTCTTCCGGTTCAATGCCAAGTATGCGGTGGAGCTGGAGGGGCAGCAGCCCATCAGCGTGCCCCCGAGCACCAACAGCACGGTGTACCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000432718.1
ENST00000454547.1
ENST00000538309.5
ENST00000538839.5
CDS CCA 90 bp GAAGGATGCGGTAGACAGCATAGCTGGCCAGCATGGCAGTGTCACTaGGCTTCCATAGGACCACGTTGCCCATCAGGGCCGGTGCCCCCG +
Preference number: 5 (lower is better)
Translates to: EGCGRQHSWPAWQCH*ASIGPRCPSGPVPP
Trigger: CGGGGGCACCGGCCCTGATGGGCAACGTGGTCCTATGGAAGCCCAGTGACACTGCCATGCTGGCCAGCTATGCTGTCTACCGCATCCTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538309.5
ENST00000538839.5
CDS-3UTR CAA 90 bp ATCCATGGGCCAGTGGCACTTGGGGAATGGCCACACCAGCTCCGGGTGGGGTCCGTCCTTCAAGGCCTTTaGCAGGGCATCTCGCTCAGG +
Preference number: 5 (lower is better)
Translates to: IHGPVALGEWPHQLRVGSVLQGL*QGISLR
Trigger: CCTGAGCGAGATGCCCTGCAAAAGGCCTTGAAGGAC...GGACCCCACCCGGAGCTGGTGTGGCCATTCCCCAAGTGCCACTGGCCCATGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CAA 90 bp TGGCACCAGCACCCACCCCCATCCATGGGCCAGTGGCACTTGGGGAATGGCCACGTCCTTCAAGGCCTTTaGCAGGGCATCTCGCTCAGG +
Preference number: 5 (lower is better)
Translates to: WHQHPPPSMGQWHLGNGHVLQGL*QGISLR
Trigger: CCTGAGCGAGATGCCCTGCAAAAGGCCTTGAAGGAC...GTGGCCATTCCCCAAGTGCCACTGGCCCATGGATGGGGGTGGGTGCTGGTGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CAA 90 bp CAAGCAGGAGGCATCTGGACGGACAGACAGCTGGACGGTGGAGCCCGAGAGGGGGGCTTATGTGTCTCCTaGATGACCTGCGGCGACGTC +
Preference number: 5 (lower is better)
Translates to: QAGGIWTDRQLDGGAREGGLCVS*MTCGDV
Trigger: GACGTCGCCGCAGGTCATCAAGGAGACACATAAGCC...CCCCTCTCGGGCTCCACCGTCCAGCTGTCTGTCCGTCCAGATGCCTCCTGCTTG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000290597.9
CDS TCA 90 bp CCTTCAAGGCCTTTTGCAGGGCATCTCGCTCAGGGCTGCCCTGCGTaGAGGCTAAGACGGGCTCGTTGGCCACCTTCAGGGAGGAGGTGT +
Preference number: 5 (lower is better)
Translates to: PSRPFAGHLAQGCPA*RLRRARWPPSGRRC
Trigger: ACACCTCCTCCCTGAAGGTGGCCAACGAGCCCGTCTTAGCCTTCACGCAGGGCAGCCCTGAGCGAGATGCCCTGCAAAAGGCCTTGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000432718.1
ENST00000538309.5
ENST00000538839.5
CDS TCA 90 bp CACGGAGTCATCACACTTGCCCCCGGCCAGGATGGTGAGGCTGGGTaGGGAGCGTGCGTGCTCCAGCCACTTCTTGATACGGGCAAAGGA +
Preference number: 5 (lower is better)
Translates to: HGVITLAPGQDGEAG*GACVLQPLLDTGKG
Trigger: TCCTTTGCCCGTATCAAGAAGTGGCTGGAGCACGCACGCTCCTCACCCAGCCTCACCATCCTGGCCGGGGGCAAGTGTGATGACTCCGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538309.5
CDS TCA 90 bp TGGCCTCCTGCACGACGTCCTTATCCTGGGAGAACACTGCCCCCGTaGGGCCATAGCTGGTGGTGCTGTCAACCAGCTGCAGCGTCTCCT +
Preference number: 5 (lower is better)
Translates to: WPPARRPYPGRTLPP*GHSWWCCQPAAASP
Trigger: AGGAGACGCTGCAGCTGGTTGACAGCACCACCAGCTATGGCCTCACGGGGGCAGTGTTCTCCCAGGATAAGGACGTCGTGCAGGAGGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538309.5
ENST00000538839.5
CDS GCA 90 bp AGGTCCTTCAAGGCCTTTTGCAGGGCATCTCGCTCAGGGCTGCCCTaGGTGAAGGCTAAGACGGGCTCGTTGGCCACCTTCAGGGAGGAG +
Preference number: 5 (lower is better)
Translates to: RSFKAFCRASRSGLP*VKAKTGSLATFREE
Trigger: CTCCTCCCTGAAGGTGGCCAACGAGCCCGTCTTAGCCTTCACGCAGGGCAGCCCTGAGCGAGATGCCCTGCAAAAGGCCTTGAAGGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000432718.1
ENST00000538309.5
ENST00000538839.5
CDS-3UTR CAA 90 bp TGGGGTCCCATGCAGGCATCCTGGAGGAAGACCCAACACTTTCACAGTCCCCTACGGTACACCGTGCTGTaGGTGCTCGGGGGCACGCTG +
Preference number: 5 (lower is better)
Translates to: WGPMQASWRKTQHFHSPLRYTVL*VLGGTL
Trigger: CAGCGTGCCCCCGAGCACCAACAGCACGGTGTACCG...TAGGGGACTGTGAAAGTGTTGGGTCTTCCTCCAGGATGCCTGCATGGGACCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CAA 90 bp ATGACACATATCCTGGAAGGACACAGAACCCACACCCAGCCCAGCTGGCACCAGGGTGCCCCCGCCAGGTaGCCGCCGATTGCAGTGAAG +
Preference number: 5 (lower is better)
Translates to: MTHILEGHRTHTQPSWHQGAPAR*PPIAVK
Trigger: CTTCACTGCAATCGGCGGCAACCTGGCGGGGGCACC...CTGGTGCCAGCTGGGCTGGGTGTGGGTTCTGTGTCCTTCCAGGATATGTGTCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CAA 90 bp CCATGGGCCAGTGGCACTTGGGGAATGGCCACACCAGCTCCGGGTGGGGTCCCAACACTGCCTGTGAAGTaGATGCCACAGAGGTGCTCT +
Preference number: 5 (lower is better)
Translates to: PWASGTWGMATPAPGGVPTLPVK*MPQRCS
Trigger: AGAGCACCTCTGTGGCATCAACTTCACAGGCAGTGT...TGGGACCCCACCCGGAGCTGGTGTGGCCATTCCCCAAGTGCCACTGGCCCATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS GCA 90 bp GCCAGGCGTGGGAAGGTGTGGAACCGGTCCAGGTTCTGGGCCACCTaGTTCCACAGGTGTTTGAAGGTGGGCACACTGCCTGTGAAGTTG +
Preference number: 5 (lower is better)
Translates to: ARRGKVWNRSRFWAT*FHRCLKVGTLPVKL
Trigger: CAACTTCACAGGCAGTGTGCCCACCTTCAAACACCTGTGGAAGCAGGTGGCCCAGAACCTGGACCGGTTCCACACCTTCCCACGCCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538309.5
ENST00000538839.5
CDS GCA 90 bp AAGGTCCCAAAATCCTCTGCAGGGTCGCCCACTTTGATCCGACTGTaGTCCTCCAGCAGCCGCCCTTTGATCTGCGGCCACAGCGAGTGC +
Preference number: 5 (lower is better)
Translates to: KVPKSSAGSPTLIRL*SSSSRPLICGHSEC
Trigger: GCACTCGCTGTGGCCGCAGATCAAAGGGCGGCTGCTGGAGGAGCACAGTCGGATCAAAGTGGGCGACCCTGCAGAGGATTTTGGGACCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538309.5
ENST00000538839.5
CDS GCA 90 bp CACTTGCCCCCGGCCAGGATGGTGAGGCTGGGTGAGGAGCGTGCGTaGTCCAGCCACTTCTTGATACGGGCAAAGGACTTGGCATCAATC +
Preference number: 5 (lower is better)
Translates to: HLPPARMVRLGEERA*SSHFLIRAKDLASI
Trigger: GATTGATGCCAAGTCCTTTGCCCGTATCAAGAAGTGGCTGGAGCACGCACGCTCCTCACCCAGCCTCACCATCCTGGCCGGGGGCAAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538309.5
CDS GCA 90 bp GCAAAGAGGCAGAGTCACAACTCCCTCTCGAAGCATCAGGGCCGGTaGCCCCGCCAGGTTGCCGCCGATTGCAGTGAAGTTAAAGGGCGA +
Preference number: 5 (lower is better)
Translates to: AKRQSHNSLSKHQGR*PRQVAADCSEVKGR
Trigger: TCGCCCTTTAACTTCACTGCAATCGGCGGCAACCTGGCGGGGGCACCGGCCCTGATGCTTCGAGAGGGAGTTGTGACTCTGCCTCTTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454547.1
CDS-3UTR CAA 90 bp TGGCACCAGCACCCACCCCCATCCATGGGCCAGTGGCACTTGGGGAATGGCCACGCCTCAATGGCTTTGTaGAGCAGGCTCTTGTCTGCA +
Preference number: 5 (lower is better)
Translates to: WHQHPPPSMGQWHLGNGHASMAL*SRLLSA
Trigger: TGCAGACAAGAGCCTGCTCAACAAAGCCATTGAGGC...GTGGCCATTCCCCAAGTGCCACTGGCCCATGGATGGGGGTGGGTGCTGGTGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CAA 90 bp GCACCAGCACCCACCCCCATCCATGGGCCAGTGGCACTTGGGGAATGGCCACACGCAGCCTCAATGGCTTaGTTGAGCAGGCTCTTGTCT +
Preference number: 5 (lower is better)
Translates to: APAPTPIHGPVALGEWPHAASMA*LSRLLS
Trigger: AGACAAGAGCCTGCTCAACAAAGCCATTGAGGCTGC...GTGTGGCCATTCCCCAAGTGCCACTGGCCCATGGATGGGGGTGGGTGCTGGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CAA 90 bp CCATGGGCCAGTGGCACTTGGGGAATGGCCACACCAGCTCCGGGTGGGGTCCCAACCGCATACTTGGCATaGAACCGGAAGAAGTCGATG +
Preference number: 5 (lower is better)
Translates to: PWASGTWGMATPAPGGVPTAYLA*NRKKSM
Trigger: CATCGACTTCTTCCGGTTCAATGCCAAGTATGCGGT...TGGGACCCCACCCGGAGCTGGTGTGGCCATTCCCCAAGTGCCACTGGCCCATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CAA 90 bp GGTCCCATGCAGGCATCCTGGAGGAAGACCCAACACTTTCACAGTCCCCTAAGACGGTACACCGTGCTGTaGGTGCTCGGGGGCACGCTG +
Preference number: 5 (lower is better)
Translates to: GPMQASWRKTQHFHSPLRRYTVL*VLGGTL
Trigger: CAGCGTGCCCCCGAGCACCAACAGCACGGTGTACCG...TCTTAGGGGACTGTGAAAGTGTTGGGTCTTCCTCCAGGATGCCTGCATGGGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CAA 90 bp CAGTGGCACTTGGGGAATGGCCACACCAGCTCCGGGTGGGGTCCCATGCAGGCAACACTGCCTGTGAAGTaGATGCCACAGAGGTGCTCT +
Preference number: 5 (lower is better)
Translates to: QWHLGNGHTSSGWGPMQATLPVK*MPQRCS
Trigger: AGAGCACCTCTGTGGCATCAACTTCACAGGCAGTGT...TGCCTGCATGGGACCCCACCCGGAGCTGGTGTGGCCATTCCCCAAGTGCCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CAA 90 bp AGCTGGCACCAGCACCCACCCCCATCCATGGGCCAGTGGCACTTGGGGAATGGCACACTGCCTGTGAAGTaGATGCCACAGAGGTGCTCT +
Preference number: 5 (lower is better)
Translates to: SWHQHPPPSMGQWHLGNGTLPVK*MPQRCS
Trigger: AGAGCACCTCTGTGGCATCAACTTCACAGGCAGTGT...GCCATTCCCCAAGTGCCACTGGCCCATGGATGGGGGTGGGTGCTGGTGCCAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CAA 90 bp AATGACACATATCCTGGAAGGACACAGAACCCACACCCAGCCCAGCTGGCACCACCCCCTGGCTTGTCATaGGTTCCAGAGGCTCGGGCC +
Preference number: 5 (lower is better)
Translates to: NDTYPGRTQNPHPAQLAPPPGLS*VPEARA
Trigger: GGCCCGAGCCTCTGGAACCAATGACAAGCCAGGGGG...TGGTGCCAGCTGGGCTGGGTGTGGGTTCTGTGTCCTTCCAGGATATGTGTCATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CAA 90 bp GAAGGGAGGGCCAATGTCTGCCTTGGCCTGTGTCACCATGGCACAGTGGTGGCTAGCGTCAATCTCCGCTaGGATCACGGTCTTACCCTG +
Preference number: 5 (lower is better)
Translates to: EGRANVCLGLCHHGTVVASVNLR*DHGLTL
Trigger: CAGGGTAAGACCGTGATCCAAGCGGAGATTGACGCT...AGCCACCACTGTGCCATGGTGACACAGGCCAAGGCAGACATTGGCCCTCCCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CAA 90 bp CCCATGCAGGCATCCTGGAGGAAGACCCAACACTTTCACAGTCCCCTAAGAACCGCAGGGTCGCCCACTTaGATCCGACTGTGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: PMQASWRKTQHFHSPLRTAGSPT*IRLCSS
Trigger: GGAGGAGCACAGTCGGATCAAAGTGGGCGACCCTGC...GGTTCTTAGGGGACTGTGAAAGTGTTGGGTCTTCCTCCAGGATGCCTGCATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CAA 90 bp TCCAAGCAGGAGGCATCTGTGGGAGGAATCGTGGTCACAGATTGGCTGCGTCAAGCAGGGTCGCCCACTTaGATCCGACTGTGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: SKQEASVGGIVVTDWLRQAGSPT*IRLCSS
Trigger: GGAGGAGCACAGTCGGATCAAAGTGGGCGACCCTGC...TTGACGCAGCCAATCTGTGACCACGATTCCTCCCACAGATGCCTCCTGCTTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CAA 90 bp ATCTCTGACCACTCAGAATCCAAGCAGGAGGCATCTGGACGGACAGACAGCTGGATGGGCCAGTGGCACTaGGGGAATGGCCACACCAGC +
Preference number: 5 (lower is better)
Translates to: ISDHSESKQEASGRTDSWMGQWH*GNGHTS
Trigger: GCTGGTGTGGCCATTCCCCAAGTGCCACTGGCCCAT...CCAGCTGTCTGTCCGTCCAGATGCCTCCTGCTTGGATTCTGAGTGGTCAGAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290597.9
CDS-3UTR CAA 90 bp TCTGGGCAAAGATACAGTGAGGAAGGTAGACAGCCCAGACCAGAGAGGGCAAGGATGGGCCAGTGGCACTaGGGGAATGGCCACACCAGC +
Preference number: 5 (lower is better)
Translates to: SGQRYSEEGRQPRPERARMGQWH*GNGHTS
Trigger: GCTGGTGTGGCCATTCCCCAAGTGCCACTGGCCCAT...CCTTGCCCTCTCTGGTCTGGGCTGTCTACCTTCCTCACTGTATCTTTGCCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CAA 90 bp CCAGCACCCACCCCCATCCATGGGCCAGTGGCACTTGGGGAATGGCCACACCAGTCTGAGCAAATCCCATaGCCACCTCACAGTGTAGAA +
Preference number: 5 (lower is better)
Translates to: PAPTPIHGPVALGEWPHQSEQIP*PPHSVE
Trigger: TTCTACACTGTGAGGTGGCAATGGGATTTGCTCAGA...CTGGTGTGGCCATTCCCCAAGTGCCACTGGCCCATGGATGGGGGTGGGTGCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CAA 90 bp GCACCAGCACCCACCCCCATCCATGGGCCAGTGGCACTTGGGGAATGGCCACACTCTGAGCAAATCCCATaGCCACCTCACAGTGTAGAA +
Preference number: 5 (lower is better)
Translates to: APAPTPIHGPVALGEWPHSEQIP*PPHSVE
Trigger: TTCTACACTGTGAGGTGGCAATGGGATTTGCTCAGA...GTGTGGCCATTCCCCAAGTGCCACTGGCCCATGGATGGGGGTGGGTGCTGGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CAA 90 bp AGCTGGCACCAGCACCCACCCCCATCCATGGGCCAGTGGCACTTGGGGAATGGCTCTGAGCAAATCCCATaGCCACCTCACAGTGTAGAA +
Preference number: 5 (lower is better)
Translates to: SWHQHPPPSMGQWHLGNGSEQIP*PPHSVE
Trigger: TTCTACACTGTGAGGTGGCAATGGGATTTGCTCAGA...GCCATTCCCCAAGTGCCACTGGCCCATGGATGGGGGTGGGTGCTGGTGCCAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CAA 90 bp ATGACACATATCCTGGAAGGACACAGAACCCACACCCAGCCCAGCTGGCACCAGGGGCCAATGTCTGCCTaGGCCTGTGTCACCATGGCA +
Preference number: 5 (lower is better)
Translates to: MTHILEGHRTHTQPSWHQGPMSA*ACVTMA
Trigger: TGCCATGGTGACACAGGCCAAGGCAGACATTGGCCC...CTGGTGCCAGCTGGGCTGGGTGTGGGTTCTGTGTCCTTCCAGGATATGTGTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS TCA 90 bp CCCCAAAGGGCTGCTGGCCCACTATCGAGCCAGTGGACTTGTCGTTaGTGTAGAAGTTGCCGGCAGCATTCCTCAGCACCTTTGTGGCCT +
Preference number: 5 (lower is better)
Translates to: PQRAAGPLSSQWTCR*CRSCRQHSSAPLWP
Trigger: AGGCCACAAAGGTGCTGAGGAATGCTGCCGGCAACTTCTACATCAACGACAAGTCCACTGGCTCGATAGTGGGCCAGCAGCCCTTTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538309.5
ENST00000538839.5
CDS-3UTR CAA 90 bp CAGTGTAGAACCAGTAGAACTAAGAATACTCCAGCCTGTGCCCCCACCCAGCCAGCTAAGACGGGCTCGTaGGCCACCTTCAGGGAGGAG +
Preference number: 5 (lower is better)
Translates to: QCRTSRTKNTPACAPTQPAKTGS*ATFREE
Trigger: CTCCTCCCTGAAGGTGGCCAACGAGCCCGTCTTAGC...TGGCTGGGTGGGGGCACAGGCTGGAGTATTCTTAGTTCTACTGGTTCTACACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CAA 90 bp TGGCTGAGCTCCTGCAGGGAAATCCCAGACCCTGAGACTGGCTCTAGGAGTGGAGCCTCAATGGCTTTGTaGAGCAGGCTCTTGTCTGCA +
Preference number: 5 (lower is better)
Translates to: WLSSCREIPDPETGSRSGASMAL*SRLLSA
Trigger: TGCAGACAAGAGCCTGCTCAACAAAGCCATTGAGGC...TCCACTCCTAGAGCCAGTCTCAGGGTCTGGGATTTCCCTGCAGGAGCTCAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CAA 90 bp CCTACTGGCCCAGGTGGGTCTGGGCAAAGATACAGTGAGGAAGGTAGACAGCCCAGCTCCACCGCATACTaGGCATTGAACCGGAAGAAG +
Preference number: 5 (lower is better)
Translates to: PTGPGGSGQRYSEEGRQPSSTAY*ALNRKK
Trigger: CTTCTTCCGGTTCAATGCCAAGTATGCGGTGGAGCT...GGGCTGTCTACCTTCCTCACTGTATCTTTGCCCAGACCCACCTGGGCCAGTAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CAA 90 bp TCCTGGAGGAAGACCCAACACTTTCACAGTCCCCTAAGAACCATCCTTGAAAGTCGGTACACCGTGCTGTaGGTGCTCGGGGGCACGCTG +
Preference number: 5 (lower is better)
Translates to: SWRKTQHFHSPLRTILESRYTVL*VLGGTL
Trigger: CAGCGTGCCCCCGAGCACCAACAGCACGGTGTACCG...ACTTTCAAGGATGGTTCTTAGGGGACTGTGAAAGTGTTGGGTCTTCCTCCAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CAA 90 bp TCTGGGCAAAGATACAGTGAGGAAGGTAGACAGCCCAGACCAGAGAGGGCAAGGGGCTTATGTGTCTCCTaGATGACCTGCGGCGACGTC +
Preference number: 5 (lower is better)
Translates to: SGQRYSEEGRQPRPERARGLCVS*MTCGDV
Trigger: GACGTCGCCGCAGGTCATCAAGGAGACACATAAGCC...CCTTGCCCTCTCTGGTCTGGGCTGTCTACCTTCCTCACTGTATCTTTGCCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS GCA 90 bp CACCGCATACTTGGCATTGAACCGGAAGAAGTCGATGAGTTCCGCTaGAGCGTCAATCTCCGCTTGGATCACGGTCTTACCCTGTCCCAC +
Preference number: 5 (lower is better)
Translates to: HRILGIEPEEVDEFR*SVNLRLDHGLTLSH
Trigger: GTGGGACAGGGTAAGACCGTGATCCAAGCGGAGATTGACGCTGCAGCGGAACTCATCGACTTCTTCCGGTTCAATGCCAAGTATGCGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000432718.1
ENST00000454547.1
ENST00000538309.5
ENST00000538839.5
CDS GCA 90 bp TGTTTGAAGGTGGGCACACTGCCTGTGAAGTTGATGCCACAGAGGTaGTCTGAGCTGGTGACAGTGTCCCCAAATAGGGGCCCATCAGCT +
Preference number: 5 (lower is better)
Translates to: CLKVGTLPVKLMPQR*SELVTVSPNRGPSA
Trigger: AGCTGATGGGCCCCTATTTGGGGACACTGTCACCAGCTCAGAGCACCTCTGTGGCATCAACTTCACAGGCAGTGTGCCCACCTTCAAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538309.5
ENST00000538839.5
CDS-3UTR CAA 90 bp ATGACACATATCCTGGAAGGACACAGAACCCACACCCAGCCCAGCTGGCACCAGGCAGCCTCAATGGCTTaGTTGAGCAGGCTCTTGTCT +
Preference number: 5 (lower is better)
Translates to: MTHILEGHRTHTQPSWHQAASMA*LSRLLS
Trigger: AGACAAGAGCCTGCTCAACAAAGCCATTGAGGCTGC...CTGGTGCCAGCTGGGCTGGGTGTGGGTTCTGTGTCCTTCCAGGATATGTGTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CAA 90 bp GGTCCCATGCAGGCATCCTGGAGGAAGACCCAACACTTTCACAGTCCCCTAAGAAGCGTCAATCTCCGCTaGGATCACGGTCTTACCCTG +
Preference number: 5 (lower is better)
Translates to: GPMQASWRKTQHFHSPLRSVNLR*DHGLTL
Trigger: CAGGGTAAGACCGTGATCCAAGCGGAGATTGACGCT...TCTTAGGGGACTGTGAAAGTGTTGGGTCTTCCTCCAGGATGCCTGCATGGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CAA 90 bp TGGGGTCCCATGCAGGCATCCTGGAGGAAGACCCAACACTTTCACAGTCCCCTATGCTCCAGCCACTTCTaGATACGGGCAAAGGACTTG +
Preference number: 5 (lower is better)
Translates to: WGPMQASWRKTQHFHSPLCSSHF*IRAKDL
Trigger: CAAGTCCTTTGCCCGTATCAAGAAGTGGCTGGAGCA...TAGGGGACTGTGAAAGTGTTGGGTCTTCCTCCAGGATGCCTGCATGGGACCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290597.9
ENST00000375341.8
CDS-3UTR CAA 90 bp CACAGTGTAGAACCAGTAGAACTAAGAATACTCCAGCCTGTGCCCCCACCCAGCGGCTTATGTGTCTCCTaGATGACCTGCGGCGACGTC +
Preference number: 5 (lower is better)
Translates to: HSVEPVELRILQPVPPPSGLCVS*MTCGDV
Trigger: GACGTCGCCGCAGGTCATCAAGGAGACACATAAGCC...GCTGGGTGGGGGCACAGGCTGGAGTATTCTTAGTTCTACTGGTTCTACACTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CAA 90 bp AGGCCCATCCAAGGTTTTCCAGAATCACGGCCTAAACCGGCAGGACCATCCCATGTTAAAAGGCGACACTaGGTACTGCACGTCCGACGT +
Preference number: 5 (lower is better)
Translates to: RPIQGFPESRPKPAGPSHVKRRH*VLHVRR
Trigger: ACGTCGGACGTGCAGTACCAAGTGTCGCCTTTTAAC...ATGGGATGGTCCTGCCGGTTTAGGCCGTGATTCTGGAAAACCTTGGATGGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CAA 90 bp GGTCCCATGCAGGCATCCTGGAGGAAGACCCAACACTTTCACAGTCCCCTAAGAGCAGCCTCAATGGCTTaGTTGAGCAGGCTCTTGTCT +
Preference number: 5 (lower is better)
Translates to: GPMQASWRKTQHFHSPLRAASMA*LSRLLS
Trigger: AGACAAGAGCCTGCTCAACAAAGCCATTGAGGCTGC...TCTTAGGGGACTGTGAAAGTGTTGGGTCTTCCTCCAGGATGCCTGCATGGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CAA 90 bp ATCTCTGACCACTCAGAATCCAAGCAGGAGGCATCTGGACGGACAGACAGCTGGAGCTCCACCGCATACTaGGCATTGAACCGGAAGAAG +
Preference number: 5 (lower is better)
Translates to: ISDHSESKQEASGRTDSWSSTAY*ALNRKK
Trigger: CTTCTTCCGGTTCAATGCCAAGTATGCGGTGGAGCT...CCAGCTGTCTGTCCGTCCAGATGCCTCCTGCTTGGATTCTGAGTGGTCAGAGAT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290597.9
CDS-3UTR CAA 90 bp TCCTGGAGGAAGACCCAACACTTTCACAGTCCCCTAAGAACCATCCTTGAAAGTTTCCATAGGACCACGTaGCCCATCAGGGCCGGTGCC +
Preference number: 5 (lower is better)
Translates to: SWRKTQHFHSPLRTILESFHRTT*PIRAGA
Trigger: GGCACCGGCCCTGATGGGCAACGTGGTCCTATGGAA...ACTTTCAAGGATGGTTCTTAGGGGACTGTGAAAGTGTTGGGTCTTCCTCCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CAA 90 bp CAGTGTAGAACCAGTAGAACTAAGAATACTCCAGCCTGTGCCCCCACCCAGCCATGCTTCCACAGGTGTTaGAAGGTGGGCACACTGCCT +
Preference number: 5 (lower is better)
Translates to: QCRTSRTKNTPACAPTQPCFHRC*KVGTLP
Trigger: AGGCAGTGTGCCCACCTTCAAACACCTGTGGAAGCA...TGGCTGGGTGGGGGCACAGGCTGGAGTATTCTTAGTTCTACTGGTTCTACACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CAA 90 bp CTAAGAACCATCCTTGAAAGTCATGCTTTACAGATCTCTGACCACTCAGAATCCGGTGCCCCCGCCAGGTaGCCGCCGATTGCAGTGAAG +
Preference number: 5 (lower is better)
Translates to: LRTILESHALQISDHSESGAPAR*PPIAVK
Trigger: CTTCACTGCAATCGGCGGCAACCTGGCGGGGGCACC...GGATTCTGAGTGGTCAGAGATCTGTAAAGCATGACTTTCAAGGATGGTTCTTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CAA 90 bp TTAAGTAACAGGCATTTTATTGGGTGGCATCTGAGCAAATCCCATTGCCACCTCTTCCATAGGACCACGTaGCCCATCAGGGCCGGTGCC +
Preference number: 5 (lower is better)
Translates to: LSNRHFIGWHLSKSHCHLFHRTT*PIRAGA
Trigger: GGCACCGGCCCTGATGGGCAACGTGGTCCTATGGAA...GAGGTGGCAATGGGATTTGCTCAGATGCCACCCAATAAAATGCCTGTTACTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290597.9
ENST00000375341.8
CDS-3UTR CAA 90 bp CTAAGAACCATCCTTGAAAGTCATGCTTTACAGATCTCTGACCACTCAGAATCCCCCCCTGGCTTGTCATaGGTTCCAGAGGCTCGGGCC +
Preference number: 5 (lower is better)
Translates to: LRTILESHALQISDHSESPPGLS*VPEARA
Trigger: GGCCCGAGCCTCTGGAACCAATGACAAGCCAGGGGG...GGATTCTGAGTGGTCAGAGATCTGTAAAGCATGACTTTCAAGGATGGTTCTTAG
52% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CAA 90 bp TTAAGTAACAGGCATTTTATTGGGTGGCATCTGAGCAAATCCCATTGCCACCTCATGGGCCAGTGGCACTaGGGGAATGGCCACACCAGC +
Preference number: 5 (lower is better)
Translates to: LSNRHFIGWHLSKSHCHLMGQWH*GNGHTS
Trigger: GCTGGTGTGGCCATTCCCCAAGTGCCACTGGCCCAT...GAGGTGGCAATGGGATTTGCTCAGATGCCACCCAATAAAATGCCTGTTACTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290597.9
ENST00000375341.8
CDS TCA 90 bp GCCACCTTCAGGGAGGAGGTGTGCTTCCACCGCAGGGCGGTTGTTTaGAGTTTAAACACACAGATGCAAAACCACGTTGAAGTATTTTCC +
Preference number: 5 (lower is better)
Translates to: ATFREEVCFHRRAVV*SLNTQMQNHVEVFS
Trigger: GGAAAATACTTCAACGTGGTTTTGCATCTGTGTGTTTAAACTTCAAACAACCGCCCTGCGGTGGAAGCACACCTCCTCCCTGAAGGTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538309.5
CDS-3UTR CAA 90 bp TCCTGGAGGAAGACCCAACACTTTCACAGTCCCCTAAGAACCATCCTTGAAAGTGTTAAAAGGCGACACTaGGTACTGCACGTCCGACGT +
Preference number: 5 (lower is better)
Translates to: SWRKTQHFHSPLRTILESVKRRH*VLHVRR
Trigger: ACGTCGGACGTGCAGTACCAAGTGTCGCCTTTTAAC...ACTTTCAAGGATGGTTCTTAGGGGACTGTGAAAGTGTTGGGTCTTCCTCCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CAA 90 bp TCCTGGAGGAAGACCCAACACTTTCACAGTCCCCTAAGAACCATCCTTGAAAGTGCCTCAATGGCTTTGTaGAGCAGGCTCTTGTCTGCA +
Preference number: 5 (lower is better)
Translates to: SWRKTQHFHSPLRTILESASMAL*SRLLSA
Trigger: TGCAGACAAGAGCCTGCTCAACAAAGCCATTGAGGC...ACTTTCAAGGATGGTTCTTAGGGGACTGTGAAAGTGTTGGGTCTTCCTCCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CAA 90 bp CACAGTCCCCTAAGAACCATCCTTGAAAGTCATGCTTTACAGATCTCTGACCACGGCCCGAAGATCTCCTaGGCATCAATCACTGCAGAG +
Preference number: 5 (lower is better)
Translates to: HSPLRTILESHALQISDHGPKIS*ASITAE
Trigger: CTCTGCAGTGATTGATGCCAAGGAGATCTTCGGGCC...GTGGTCAGAGATCTGTAAAGCATGACTTTCAAGGATGGTTCTTAGGGGACTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538839.5
CDS-3UTR CAA 90 bp CACAGTCCCCTAAGAACCATCCTTGAAAGTCATGCTTTACAGATCTCTGACCACGTTAAAAGGCGACACTaGGTACTGCACGTCCGACGT +
Preference number: 5 (lower is better)
Translates to: HSPLRTILESHALQISDHVKRRH*VLHVRR
Trigger: ACGTCGGACGTGCAGTACCAAGTGTCGCCTTTTAAC...GTGGTCAGAGATCTGTAAAGCATGACTTTCAAGGATGGTTCTTAGGGGACTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CAA 90 bp TCCTGGAGGAAGACCCAACACTTTCACAGTCCCCTAAGAACCATCCTTGAAAGTACCGCATACTTGGCATaGAACCGGAAGAAGTCGATG +
Preference number: 5 (lower is better)
Translates to: SWRKTQHFHSPLRTILESTAYLA*NRKKSM
Trigger: CATCGACTTCTTCCGGTTCAATGCCAAGTATGCGGT...ACTTTCAAGGATGGTTCTTAGGGGACTGTGAAAGTGTTGGGTCTTCCTCCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CAA 90 bp AGAACCATCCTTGAAAGTCATGCTTTACAGATCTCTGACCACTCAGAATCCAAGTGCTTCCACAGGTGTTaGAAGGTGGGCACACTGCCT +
Preference number: 5 (lower is better)
Translates to: RTILESHALQISDHSESKCFHRC*KVGTLP
Trigger: AGGCAGTGTGCCCACCTTCAAACACCTGTGGAAGCA...CTTGGATTCTGAGTGGTCAGAGATCTGTAAAGCATGACTTTCAAGGATGGTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CAA 90 bp CACTTTCACAGTCCCCTAAGAACCATCCTTGAAAGTCATGCTTTACAGATCTCTTGCTTCCACAGGTGTTaGAAGGTGGGCACACTGCCT +
Preference number: 5 (lower is better)
Translates to: HFHSPLRTILESHALQISCFHRC*KVGTLP
Trigger: AGGCAGTGTGCCCACCTTCAAACACCTGTGGAAGCA...AGAGATCTGTAAAGCATGACTTTCAAGGATGGTTCTTAGGGGACTGTGAAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538839.5
CDS-3UTR CAA 90 bp ACCATCCTTGAAAGTCATGCTTTACAGATCTCTGACCACTCAGAATCCAAGCAGTGCTCCAGCCACTTCTaGATACGGGCAAAGGACTTG +
Preference number: 5 (lower is better)
Translates to: TILESHALQISDHSESKQCSSHF*IRAKDL
Trigger: CAAGTCCTTTGCCCGTATCAAGAAGTGGCTGGAGCA...CTGCTTGGATTCTGAGTGGTCAGAGATCTGTAAAGCATGACTTTCAAGGATGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290597.9
ENST00000375341.8
CDS TCA 90 bp AAGGCAGGCTTTATCCCAAAAAGACCCAAACTCCTCTCTCTAAGCTaGAAGGGCAGCACATTCCAGAACACAGTCTCAGAATGTGAACCA +
Preference number: 5 (lower is better)
Translates to: KAGFIPKRPKLLSLS*KGSTFQNTVSECEP
Trigger: TGGTTCACATTCTGAGACTGTGTTCTGGAATGTGCTGCCCTTTCAGCTTAGAGAGAGGAGTTTGGGTCTTTTTGGGATAAAGCCTGCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538309.5
CDS-3UTR CAA 90 bp TTAAGTAACAGGCATTTTATTGGGTGGCATCTGAGCAAATCCCATTGCCACCTCACCGCATACTTGGCATaGAACCGGAAGAAGTCGATG +
Preference number: 5 (lower is better)
Translates to: LSNRHFIGWHLSKSHCHLTAYLA*NRKKSM
Trigger: CATCGACTTCTTCCGGTTCAATGCCAAGTATGCGGT...GAGGTGGCAATGGGATTTGCTCAGATGCCACCCAATAAAATGCCTGTTACTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290597.9
ENST00000375341.8
CDS-3UTR CAA 90 bp ACCATCCTTGAAAGTCATGCTTTACAGATCTCTGACCACTCAGAATCCAAGCAGATACGGGCAAAGGACTaGGCATCAATCACTGCAGAG +
Preference number: 5 (lower is better)
Translates to: TILESHALQISDHSESKQIRAKD*ASITAE
Trigger: CTCTGCAGTGATTGATGCCAAGTCCTTTGCCCGTAT...CTGCTTGGATTCTGAGTGGTCAGAGATCTGTAAAGCATGACTTTCAAGGATGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290597.9
ENST00000375341.8
CDS CAA 72 bp GCCACGAAGCCCTCCAGACCCCGGTACACCGTGCTGTaGGTGCTCGGGGGCACGCTGATGGGCTGCTGCCCC +
Preference number: 6 (lower is better)
Translates to: ATKPSRPRYTVL*VLGGTLMGCCP
Trigger: GGGGCAGCAGCCCATCAGCGTGCCCCCGAGCACCAACAGCACGGTGTACCGGGGTCTGGAGGGCTTCGTGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000432718.1
ENST00000454547.1
ENST00000538309.5
ENST00000538839.5
CDS CAA 90 bp GCATCTCGCTCAGGGCTGCCCTGCGTGAAGGCTAAGACGGGCTCGTaGGCCACCTTCAGGGAGGAGGTGTGCTTCCACCGCAGGCCGGCC +
Preference number: 6 (lower is better)
Translates to: ASRSGLPCVKAKTGS*ATFREEVCFHRRPA
Trigger: GGCCGGCCTGCGGTGGAAGCACACCTCCTCCCTGAAGGTGGCCAACGAGCCCGTCTTAGCCTTCACGCAGGGCAGCCCTGAGCGAGATGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000432718.1
ENST00000538839.5
CDS TCA 72 bp CCCGGTACACCGTGCTGTTGGTGCTCGGGGGCACGCTaGTGGGCTGCTGCCCCTCCAGCTCCACCGCATACT +
Preference number: 6 (lower is better)
Translates to: PGTPCCWCSGAR*WAAAPPAPPHT
Trigger: AGTATGCGGTGGAGCTGGAGGGGCAGCAGCCCATCAGCGTGCCCCCGAGCACCAACAGCACGGTGTACCGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000432718.1
ENST00000454547.1
ENST00000538309.5
ENST00000538839.5
CDS GCA 72 bp CTGTTCGCTGGATCGTCCGCCCGGGCGCGGCGAGAATaGACAACCCCGTCCAGAGCGCACCACCTCGATCCT +
Preference number: 6 (lower is better)
Translates to: LFAGSSARARRE*TTPSRAHHLDP
Trigger: AGGATCGAGGTGGTGCGCTCTGGACGGGGTTGTGCATTCTCGCCGCGCCCGGGCGGACGATCCAGCGAACAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432718.1
CDS TCA 72 bp GCACGCGGAACACTTCTGGCCACCGTACTCGAAGGCTaGGCGGAGGGTCCCGCTCACCACGCTCTCCACGTC +
Preference number: 6 (lower is better)
Translates to: ARGTLLATVLEG*AEGPAHHALHV
Trigger: GACGTGGAGAGCGTGGTGAGCGGGACCCTCCGCTCAGCCTTCGAGTACGGTGGCCAGAAGTGTTCCGCGTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538309.5
ENST00000538839.5
CDS CCA 72 bp GCAGCAGCATCTCGGGTTAGAAGCGGGGCTGTTCGCTaGATCGTCCGCCCGGGCGCGGCGAGAATGCACAAC +
Preference number: 6 (lower is better)
Translates to: AAASRVRSGAVR*IVRPGAARMHN
Trigger: GTTGTGCATTCTCGCCGCGCCCGGGCGGACGATCCAGCGAACAGCCCCGCTTCTAACCCGAGATGCTGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432718.1
CDS CAA 90 bp GCATCTCGCTCAGGGCTGCCCTGCGTGAAGGCTAAGACGGGCTCGTaGGCCACCTTCAGGGAGGAGGTGTGCTTCCACCGCAGGGCGGTT +
Preference number: 6 (lower is better)
Translates to: ASRSGLPCVKAKTGS*ATFREEVCFHRRAV
Trigger: AACCGCCCTGCGGTGGAAGCACACCTCCTCCCTGAAGGTGGCCAACGAGCCCGTCTTAGCCTTCACGCAGGGCAGCCCTGAGCGAGATGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538309.5
CDS GCA 72 bp CCTGTCCCACCATGGTCTTGGCGAGGATCTCAGCCCTaGGCGGCCCACTCAGCATGTCTGCCGCCTTCAGGA +
Preference number: 6 (lower is better)
Translates to: PVPPWSWRGSQP*AAHSACLPPSG
Trigger: TCCTGAAGGCGGCAGACATGCTGAGTGGGCCGCGCAGGGCTGAGATCCTCGCCAAGACCATGGTGGGACAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000432718.1
ENST00000454547.1
ENST00000538309.5
ENST00000538839.5
CDS GCA 72 bp ACCGTGCTGTTGGTGCTCGGGGGCACGCTGATGGGCTaGTGCCCCTCCAGCTCCACCGCATACTTGGCATTG +
Preference number: 6 (lower is better)
Translates to: TVLLVLGGTLMG*CPSSSTAYLAL
Trigger: CAATGCCAAGTATGCGGTGGAGCTGGAGGGGCAGCAGCCCATCAGCGTGCCCCCGAGCACCAACAGCACGGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000432718.1
ENST00000454547.1
ENST00000538309.5
ENST00000538839.5
CDS GCA 72 bp CATCAGGGCCGGTGCCCCCGCCAGGTTGCCGCCGATTaGAGTGAAGTTAAAGGGCGAGATGGCCGCCACGAA +
Preference number: 6 (lower is better)
Translates to: HQGRCPRQVAAD*SEVKGRDGRHE
Trigger: TTCGTGGCGGCCATCTCGCCCTTTAACTTCACTGCAATCGGCGGCAACCTGGCGGGGGCACCGGCCCTGATG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000432718.1
ENST00000454547.1
ENST00000538309.5
ENST00000538839.5
CDS GCA 72 bp GTCCCGCTCACCACGCTCTCCACGTCGGCCGAGCGGTaGACGAAGTGGAAGTTCTTTCCGCCGCACTCTCCA +
Preference number: 6 (lower is better)
Translates to: VPLTTLSTSAER*TKWKFFPPHSP
Trigger: TGGAGAGTGCGGCGGAAAGAACTTCCACTTCGTGCACCGCTCGGCCGACGTGGAGAGCGTGGTGAGCGGGAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538309.5
ENST00000538839.5
CDS CCA 72 bp TTTCCGCCGCACTCTCCAGCCAGGCGTGGGAAGGTGTaGAACCGGTCCAGGTTCTGGGCCACCTGCTTCCAC +
Preference number: 6 (lower is better)
Translates to: FPPHSPARRGKV*NRSRFWATCFH
Trigger: GTGGAAGCAGGTGGCCCAGAACCTGGACCGGTTCCACACCTTCCCACGCCTGGCTGGAGAGTGCGGCGGAAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538309.5
ENST00000538839.5
CDS CCA 72 bp ACCACGCTCTCCACGTCGGCCGAGCGGTGCACGAAGTaGAAGTTCTTTCCGCCGCACTCTCCAGCCAGGCGT +
Preference number: 6 (lower is better)
Translates to: TTLSTSAERCTK*KFFPPHSPARR
Trigger: ACGCCTGGCTGGAGAGTGCGGCGGAAAGAACTTCCACTTCGTGCACCGCTCGGCCGACGTGGAGAGCGTGGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538309.5
ENST00000538839.5
CDS CAA 72 bp TCAGGGCTGCCCTGCGTGAAGGCTAAGACGGGCTCGTaGGCCACCTTCAGGGAGGAGGTGTGCTTCCACCGC +
Preference number: 6 (lower is better)
Translates to: SGLPCVKAKTGS*ATFREEVCFHR
Trigger: GCGGTGGAAGCACACCTCCTCCCTGAAGGTGGCCAACGAGCCCGTCTTAGCCTTCACGCAGGGCAGCCCTGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000432718.1
ENST00000538309.5
ENST00000538839.5
CDS CAA 90 bp TTCCATAGGACCACGTTGCCCATCAGGGCCGGTGCCCCCGCCAGGTaGCCGCCGATTGCAGTGAAGTTAAAGGGCGAGATGGCCGCCACG +
Preference number: 6 (lower is better)
Translates to: FHRTTLPIRAGAPAR*PPIAVKLKGEMAAT
Trigger: CGTGGCGGCCATCTCGCCCTTTAACTTCACTGCAATCGGCGGCAACCTGGCGGGGGCACCGGCCCTGATGGGCAACGTGGTCCTATGGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538309.5
ENST00000538839.5
CDS CAA 90 bp GTCACAACTCCCTCTCGAAGCATCAGGGCCGGTGCCCCCGCCAGGTaGCCGCCGATTGCAGTGAAGTTAAAGGGCGAGATGGCCGCCACG +
Preference number: 6 (lower is better)
Translates to: VTTPSRSIRAGAPAR*PPIAVKLKGEMAAT
Trigger: CGTGGCGGCCATCTCGCCCTTTAACTTCACTGCAATCGGCGGCAACCTGGCGGGGGCACCGGCCCTGATGCTTCGAGAGGGAGTTGTGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454547.1
CDS TCA 72 bp CCTTTTGCAGGGCATCTCGCTCAGGGCTGCCCTGCGTaGAGGCTAAGACGGGCTCGTTGGCCACCTTCAGGG +
Preference number: 6 (lower is better)
Translates to: PFAGHLAQGCPA*RLRRARWPPSG
Trigger: CCCTGAAGGTGGCCAACGAGCCCGTCTTAGCCTTCACGCAGGGCAGCCCTGAGCGAGATGCCCTGCAAAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000432718.1
ENST00000538309.5
ENST00000538839.5
CDS GCA 72 bp GAGGATCTCAGCCCTGCGCGGCCCACTCAGCATGTCTaGCGCCTTCAGGAAGATCTGGGCCCGGTCTGCAAT +
Preference number: 6 (lower is better)
Translates to: EDLSPARPTQHV*RLQEDLGPVCN
Trigger: ATTGCAGACCGGGCCCAGATCTTCCTGAAGGCGGCAGACATGCTGAGTGGGCCGCGCAGGGCTGAGATCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000432718.1
ENST00000454547.1
ENST00000538309.5
ENST00000538839.5
CDS GCA 72 bp GTGCTGTTGGTGCTCGGGGGCACGCTGATGGGCTGCTaGCCCTCCAGCTCCACCGCATACTTGGCATTGAAC +
Preference number: 6 (lower is better)
Translates to: VLLVLGGTLMGC*PSSSTAYLALN
Trigger: GTTCAATGCCAAGTATGCGGTGGAGCTGGAGGGGCAGCAGCCCATCAGCGTGCCCCCGAGCACCAACAGCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000432718.1
ENST00000454547.1
ENST00000538309.5
ENST00000538839.5
CDS CCA 72 bp GCCAGGCGTGGGAAGGTGTGGAACCGGTCCAGGTTCTaGGCCACCTGCTTCCACAGGTGTTTGAAGGTGGGC +
Preference number: 6 (lower is better)
Translates to: ARRGKVWNRSRF*ATCFHRCLKVG
Trigger: GCCCACCTTCAAACACCTGTGGAAGCAGGTGGCCCAGAACCTGGACCGGTTCCACACCTTCCCACGCCTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538309.5
ENST00000538839.5
CDS CCA 72 bp GATGACCTGCGGCGACGTCCAGCGCAGGATGTAGTGTaGGCCCCCTGGCTTGTCATTGGTTCCAGAGGCTCG +
Preference number: 6 (lower is better)
Translates to: DDLRRRPAQDVV*APWLVIGSRGS
Trigger: CGAGCCTCTGGAACCAATGACAAGCCAGGGGGCCCACACTACATCCTGCGCTGGACGTCGCCGCAGGTCATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538309.5
ENST00000538839.5
CDS CAA 72 bp ACCACGTTGCCCATCAGGGCCGGTGCCCCCGCCAGGTaGCCGCCGATTGCAGTGAAGTTAAAGGGCGAGATG +
Preference number: 6 (lower is better)
Translates to: TTLPIRAGAPAR*PPIAVKLKGEM
Trigger: CATCTCGCCCTTTAACTTCACTGCAATCGGCGGCAACCTGGCGGGGGCACCGGCCCTGATGGGCAACGTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538309.5
ENST00000538839.5
CDS CAA 72 bp CCCTCTCGAAGCATCAGGGCCGGTGCCCCCGCCAGGTaGCCGCCGATTGCAGTGAAGTTAAAGGGCGAGATG +
Preference number: 6 (lower is better)
Translates to: PSRSIRAGAPAR*PPIAVKLKGEM
Trigger: CATCTCGCCCTTTAACTTCACTGCAATCGGCGGCAACCTGGCGGGGGCACCGGCCCTGATGCTTCGAGAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454547.1
CDS CAA 90 bp GGGGGCACGCTGATGGGCTGCTGCCCCTCCAGCTCCACCGCATACTaGGCATTGAACCGGAAGAAGTCGATGAGTTCCGCTGCAGCGTCA +
Preference number: 6 (lower is better)
Translates to: GGTLMGCCPSSSTAY*ALNRKKSMSSAAAS
Trigger: TGACGCTGCAGCGGAACTCATCGACTTCTTCCGGTTCAATGCCAAGTATGCGGTGGAGCTGGAGGGGCAGCAGCCCATCAGCGTGCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000432718.1
ENST00000454547.1
ENST00000538309.5
ENST00000538839.5
CDS TCA 72 bp ATCACACTTGCCCCCGGCCAGGATGGTGAGGCTGGGTaGGGAGCGTGCGTGCTCCAGCCACTTCTTGATACG +
Preference number: 6 (lower is better)
Translates to: ITLAPGQDGEAG*GACVLQPLLDT
Trigger: CGTATCAAGAAGTGGCTGGAGCACGCACGCTCCTCACCCAGCCTCACCATCCTGGCCGGGGGCAAGTGTGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538309.5
CDS GCA 72 bp AAGGCCTTTTGCAGGGCATCTCGCTCAGGGCTGCCCTaGGTGAAGGCTAAGACGGGCTCGTTGGCCACCTTC +
Preference number: 6 (lower is better)
Translates to: KAFCRASRSGLP*VKAKTGSLATF
Trigger: GAAGGTGGCCAACGAGCCCGTCTTAGCCTTCACGCAGGGCAGCCCTGAGCGAGATGCCCTGCAAAAGGCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000432718.1
ENST00000538309.5
ENST00000538839.5
CDS GCA 72 bp CCGGCCAGGATGGTGAGGCTGGGTGAGGAGCGTGCGTaGTCCAGCCACTTCTTGATACGGGCAAAGGACTTG +
Preference number: 6 (lower is better)
Translates to: PARMVRLGEERA*SSHFLIRAKDL
Trigger: CAAGTCCTTTGCCCGTATCAAGAAGTGGCTGGAGCACGCACGCTCCTCACCCAGCCTCACCATCCTGGCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538309.5
CDS GCA 72 bp GGCCTCCTGCACGACGTCCTTATCCTGGGAGAACACTaGCCCCGTGAGGCCATAGCTGGTGGTGCTGTCAAC +
Preference number: 6 (lower is better)
Translates to: GLLHDVLILGEH*PREAIAGGAVN
Trigger: GTTGACAGCACCACCAGCTATGGCCTCACGGGGGCAGTGTTCTCCCAGGATAAGGACGTCGTGCAGGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538309.5
ENST00000538839.5
CDS GCA 72 bp CAGAGTCACAACTCCCTCTCGAAGCATCAGGGCCGGTaGCCCCGCCAGGTTGCCGCCGATTGCAGTGAAGTT +
Preference number: 6 (lower is better)
Translates to: QSHNSLSKHQGR*PRQVAADCSEV
Trigger: AACTTCACTGCAATCGGCGGCAACCTGGCGGGGGCACCGGCCCTGATGCTTCGAGAGGGAGTTGTGACTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454547.1
CDS CCA 72 bp CTTGGATCACGGTCTTACCCTGTCCCACCATGGTCTTaGCGAGGATCTCAGCCCTGCGCGGCCCACTCAGCA +
Preference number: 6 (lower is better)
Translates to: LGSRSYPVPPWS*RGSQPCAAHSA
Trigger: TGCTGAGTGGGCCGCGCAGGGCTGAGATCCTCGCCAAGACCATGGTGGGACAGGGTAAGACCGTGATCCAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000432718.1
ENST00000454547.1
ENST00000538309.5
ENST00000538839.5
CDS TCA 72 bp GCACGACGTCCTTATCCTGGGAGAACACTGCCCCCGTaGGGCCATAGCTGGTGGTGCTGTCAACCAGCTGCA +
Preference number: 6 (lower is better)
Translates to: ARRPYPGRTLPP*GHSWWCCQPAA
Trigger: TGCAGCTGGTTGACAGCACCACCAGCTATGGCCTCACGGGGGCAGTGTTCTCCCAGGATAAGGACGTCGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538309.5
ENST00000538839.5
CDS GCA 72 bp CATGTCTGCCGCCTTCAGGAAGATCTGGGCCCGGTCTaGAATAGGCTTCAGGTCCCACTCTTTCCGGGCAGC +
Preference number: 6 (lower is better)
Translates to: HVCRLQEDLGPV*NRLQVPLFPGS
Trigger: GCTGCCCGGAAAGAGTGGGACCTGAAGCCTATTGCAGACCGGGCCCAGATCTTCCTGAAGGCGGCAGACATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000432718.1
ENST00000454547.1
ENST00000538309.5
ENST00000538839.5
CDS GCA 72 bp GGGAAGGTGTGGAACCGGTCCAGGTTCTGGGCCACCTaGTTCCACAGGTGTTTGAAGGTGGGCACACTGCCT +
Preference number: 6 (lower is better)
Translates to: GKVWNRSRFWAT*FHRCLKVGTLP
Trigger: AGGCAGTGTGCCCACCTTCAAACACCTGTGGAAGCAGGTGGCCCAGAACCTGGACCGGTTCCACACCTTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538309.5
ENST00000538839.5
CDS CCA 72 bp GGCCCACTCAGCATGTCTGCCGCCTTCAGGAAGATCTaGGCCCGGTCTGCAATAGGCTTCAGGTCCCACTCT +
Preference number: 6 (lower is better)
Translates to: GPLSMSAAFRKI*ARSAIGFRSHS
Trigger: AGAGTGGGACCTGAAGCCTATTGCAGACCGGGCCCAGATCTTCCTGAAGGCGGCAGACATGCTGAGTGGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000432718.1
ENST00000454547.1
ENST00000538309.5
ENST00000538839.5
CDS CCA 72 bp GGTAGACAGCATAGCTGGCCAGCATGGCAGTGTCACTaGGCTTCCATAGGACCACGTTGCCCATCAGGGCCG +
Preference number: 6 (lower is better)
Translates to: GRQHSWPAWQCH*ASIGPRCPSGP
Trigger: CGGCCCTGATGGGCAACGTGGTCCTATGGAAGCCCAGTGACACTGCCATGCTGGCCAGCTATGCTGTCTACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538309.5
ENST00000538839.5
CDS CCA 72 bp GGCCAGCCTCCCGAAGGATGCGGTAGACAGCATAGCTaGCCAGCATGGCAGTGTCACTGGGCTTCCATAGGA +
Preference number: 6 (lower is better)
Translates to: GQPPEGCGRQHS*PAWQCHWASIG
Trigger: TCCTATGGAAGCCCAGTGACACTGCCATGCTGGCCAGCTATGCTGTCTACCGCATCCTTCGGGAGGCTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538309.5
ENST00000538839.5
CDS CCA 72 bp GAATCCAAGCAGGAGGCATCTGGACGGACAGACAGCTaGACGGTGGAGCCCGAGAGGGGCTCACTGCATGTA +
Preference number: 6 (lower is better)
Translates to: ESKQEASGRTDS*TVEPERGSLHV
Trigger: TACATGCAGTGAGCCCCTCTCGGGCTCCACCGTCCAGCTGTCTGTCCGTCCAGATGCCTCCTGCTTGGATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290597.9
CDS CAA 72 bp GGCTGCTGCCCCTCCAGCTCCACCGCATACTTGGCATaGAACCGGAAGAAGTCGATGAGTTCCGCTGCAGCG +
Preference number: 6 (lower is better)
Translates to: GCCPSSSTAYLA*NRKKSMSSAAA
Trigger: CGCTGCAGCGGAACTCATCGACTTCTTCCGGTTCAATGCCAAGTATGCGGTGGAGCTGGAGGGGCAGCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000432718.1
ENST00000454547.1
ENST00000538309.5
ENST00000538839.5
CDS CAA 90 bp ACGCTGATGGGCTGCTGCCCCTCCAGCTCCACCGCATACTTGGCATaGAACCGGAAGAAGTCGATGAGTTCCGCTGCAGCGTCAATCTCC +
Preference number: 6 (lower is better)
Translates to: TLMGCCPSSSTAYLA*NRKKSMSSAAASIS
Trigger: GGAGATTGACGCTGCAGCGGAACTCATCGACTTCTTCCGGTTCAATGCCAAGTATGCGGTGGAGCTGGAGGGGCAGCAGCCCATCAGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000432718.1
ENST00000454547.1
ENST00000538309.5
ENST00000538839.5
CDS TCA 72 bp GGCTGGGTGAGGAGCGTGCGTGCTCCAGCCACTTCTTaGTACGGGCAAAGGACTTGGCATCAATCACTGCAG +
Preference number: 6 (lower is better)
Translates to: GWVRSVRAPATS*YGQRTWHQSLQ
Trigger: CTGCAGTGATTGATGCCAAGTCCTTTGCCCGTATCAAGAAGTGGCTGGAGCACGCACGCTCCTCACCCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538309.5
CDS GCA 72 bp GTGGGCACACTGCCTGTGAAGTTGATGCCACAGAGGTaGTCTGAGCTGGTGACAGTGTCCCCAAATAGGGGC +
Preference number: 6 (lower is better)
Translates to: VGTLPVKLMPQR*SELVTVSPNRG
Trigger: GCCCCTATTTGGGGACACTGTCACCAGCTCAGAGCACCTCTGTGGCATCAACTTCACAGGCAGTGTGCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538309.5
ENST00000538839.5
CDS GCA 72 bp TCAATGGCTTTGTTGAGCAGGCTCGACACTTGGTACTaGACGTCCGACGTCCACACCTCCTCATCCCCCACC +
Preference number: 6 (lower is better)
Translates to: SMALLSRLDTWY*TSDVHTSSSPT
Trigger: GGTGGGGGATGAGGAGGTGTGGACGTCGGACGTGCAGTACCAAGTGTCGAGCCTGCTCAACAAAGCCATTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432718.1
CDS TCA 72 bp GCTGCTGGCCCACTATCGAGCCAGTGGACTTGTCGTTaGTGTAGAAGTTGCCGGCAGCATTCCTCAGCACCT +
Preference number: 6 (lower is better)
Translates to: AAGPLSSQWTCR*CRSCRQHSSAP
Trigger: AGGTGCTGAGGAATGCTGCCGGCAACTTCTACATCAACGACAAGTCCACTGGCTCGATAGTGGGCCAGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538309.5
ENST00000538839.5
CDS CAA 72 bp AGGCTGGGTGAGGAGCGTGCGTGCTCCAGCCACTTCTaGATACGGGCAAAGGACTTGGCATCAATCACTGCA +
Preference number: 6 (lower is better)
Translates to: RLGEERACSSHF*IRAKDLASITA
Trigger: TGCAGTGATTGATGCCAAGTCCTTTGCCCGTATCAAGAAGTGGCTGGAGCACGCACGCTCCTCACCCAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538309.5
CDS GCA 72 bp ACCTTATGTCCATGGTTAAAAGGCGACACTTGGTACTaGACGTCCGACGTCCACACCTCCTCATCCCCCACC +
Preference number: 6 (lower is better)
Translates to: TLCPWLKGDTWY*TSDVHTSSSPT
Trigger: GGTGGGGGATGAGGAGGTGTGGACGTCGGACGTGCAGTACCAAGTGTCGCCTTTTAACCATGGACATAAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538309.5
ENST00000538839.5
CDS CCA 72 bp TGTAGAAGTTGCCGGCAGCATTCCTCAGCACCTTTGTaGCCTCCTGCACGACGTCCTTATCCTGGGAGAACA +
Preference number: 6 (lower is better)
Translates to: CRSCRQHSSAPL*PPARRPYPGRT
Trigger: TGTTCTCCCAGGATAAGGACGTCGTGCAGGAGGCCACAAAGGTGCTGAGGAATGCTGCCGGCAACTTCTACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000538309.5
ENST00000538839.5
CDS GCA 72 bp CTTGGCATTGAACCGGAAGAAGTCGATGAGTTCCGCTaGAGCGTCAATCTCCGCTTGGATCACGGTCTTACC +
Preference number: 6 (lower is better)
Translates to: LGIEPEEVDEFR*SVNLRLDHGLT
Trigger: GGTAAGACCGTGATCCAAGCGGAGATTGACGCTGCAGCGGAACTCATCGACTTCTTCCGGTTCAATGCCAAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290597.9
ENST00000375341.8
ENST00000432718.1
ENST00000454547.1
ENST00000538309.5
ENST00000538839.5
CDS CAA 90 bp AGTCACTCAGTCTTGCCAAGTAAGTCACGGCTGTGTGTCTCAGTTTaGTCATCTGGCAAAGAGGCAGAGTCACAACTCCCTCTCGAAGCA +
Preference number: 6 (lower is better)
Translates to: SHSVLPSKSRLCVSV*SSGKEAESQLPLEA
Trigger: TGCTTCGAGAGGGAGTTGTGACTCTGCCTCTTTGCCAGATGACAAAACTGAGACACACAGCCGTGACTTACTTGGCAAGACTGAGTGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454547.1
CDS TCA 72 bp AGGGAGGAGGTGTGCTTCCACCGCAGGGCGGTTGTTTaGAGTTTAAACACACAGATGCAAAACCACGTTGAA +
Preference number: 6 (lower is better)
Translates to: REEVCFHRRAVV*SLNTQMQNHVE
Trigger: TTCAACGTGGTTTTGCATCTGTGTGTTTAAACTTCAAACAACCGCCCTGCGGTGGAAGCACACCTCCTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538309.5
CDS CAA 72 bp GTCTTGCCAAGTAAGTCACGGCTGTGTGTCTCAGTTTaGTCATCTGGCAAAGAGGCAGAGTCACAACTCCCT +
Preference number: 6 (lower is better)
Translates to: VLPSKSRLCVSV*SSGKEAESQLP
Trigger: AGGGAGTTGTGACTCTGCCTCTTTGCCAGATGACAAAACTGAGACACACAGCCGTGACTTACTTGGCAAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454547.1
CDS GCA 72 bp ACACAGATGCAAAACCACGTTGAAGTATTTTCCACATaGAAAGCGTTACTCTCCCTTTCTTCTCCCACAAGG +
Preference number: 6 (lower is better)
Translates to: TQMQNHVEVFST*KALLSLSSPTR
Trigger: CCTTGTGGGAGAAGAAAGGGAGAGTAACGCTTTGCATGTGGAAAATACTTCAACGTGGTTTTGCATCTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538309.5
CDS CAA 72 bp TCTCTGCTCCATCATTTATTTACTAGTCACTCAGTCTaGCCAAGTAAGTCACGGCTGTGTGTCTCAGTTTTG +
Preference number: 6 (lower is better)
Translates to: SLLHHLFTSHSV*PSKSRLCVSVL
Trigger: CAAAACTGAGACACACAGCCGTGACTTACTTGGCAAGACTGAGTGACTAGTAAATAAATGATGGAGCAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454547.1
CDS TCA 72 bp TGTTTGAAGTTTAAACACACAGATGCAAAACCACGTTaGAGTATTTTCCACATGCAAAGCGTTACTCTCCCT +
Preference number: 6 (lower is better)
Translates to: CLKFKHTDAKPR*SIFHMQSVTLP
Trigger: AGGGAGAGTAACGCTTTGCATGTGGAAAATACTTCAACGTGGTTTTGCATCTGTGTGTTTAAACTTCAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538309.5