RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ALDH3B2 (Homo sapiens)

Ensembl gene IDs: ENSG00000132746

Ensembl transcript IDs: ENST00000349015.7, ENST00000525827.6, ENST00000528756.5, ENST00000530069.6, ENST00000531248.1, ENST00000531881.6, ENST00000533962.2, ENST00000534425.6, ENST00000673808.1, ENST00000673873.1, ENST00000673966.1, ENST00000674110.1

Found 294 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GTGCGGTGTGAACCAGAGGGGTGGTGCAGAGACCAGTGTGGGATGTaGGAGGATCCCTGGGGGAGGCAGTGCTGGTGCAGTTGGGATGGG +
Preference number: 1 (lower is better)
Translates to: VRCEPEGWCRDQCGM*EDPWGRQCWCSWDG
Trigger: CCCATCCCAACTGCACCAGCACTGCCTCCCCCAGGGATCCTCTCACATCCCACACTGGTCTCTGCACCACCCCTCTGGTTCACACCGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
3UTR TCA 90 bp AGCAAGACCTTGCTTTGCAGCCCTGGCAGGCAGGATGCAGTCATGTaGCAGCTCCAGCAACCTGAGGCTGGGGGAACCTGCGGTCTGGAG +
Preference number: 1 (lower is better)
Translates to: SKTLLCSPGRQDAVM*QLQQPEAGGTCGLE
Trigger: CTCCAGACCGCAGGTTCCCCCAGCCTCAGGTTGCTGGAGCTGTCACATGACTGCATCCTGCCTGCCAGGGCTGCAAAGCAAGGTCTTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
3UTR TCA 90 bp CTAAGAAGGCAGGGCACTGTATTTTCCAGGGTGACACTGCCCCTGTaGCTGGGTCTGGCCAACCCTGACCGAGAGGGCAAAGGGCTGGAA +
Preference number: 1 (lower is better)
Translates to: LRRQGTVFSRVTLPL*LGLANPDREGKGLE
Trigger: TTCCAGCCCTTTGCCCTCTCGGTCAGGGTTGGCCAGACCCAGTCACAGGGGCAGTGTCACCCTGGAAAATACAGTGCCCTGCCTTCTTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
3UTR GCA 90 bp TCTTGGCCTCTCTCGAGCAGCGTCCCCCAGATAGAAGCAAGACCTTaGTTTGCAGCCCTGGCAGGCAGGATGCAGTCATGTGACAGCTCC +
Preference number: 1 (lower is better)
Translates to: SWPLSSSVPQIEARP*FAALAGRMQSCDSS
Trigger: GGAGCTGTCACATGACTGCATCCTGCCTGCCAGGGCTGCAAAGCAAGGTCTTGCTTCTATCTGGGGGACGCTGCTCGAGAGAGGCCAAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
3UTR CCA 90 bp TCATGTGACAGCTCCAGCAACCTGAGGCTGGGGGAACCTGCGGTCTaGAGGAACAATGTGAGTTGGGAGCATAAGCCCCTCATGGCTAGA +
Preference number: 1 (lower is better)
Translates to: SCDSSSNLRLGEPAV*RNNVSWEHKPLMAR
Trigger: TCTAGCCATGAGGGGCTTATGCTCCCAACTCACATTGTTCCTCCAGACCGCAGGTTCCCCCAGCCTCAGGTTGCTGGAGCTGTCACATGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000531248.1
ENST00000673966.1
3UTR CCA 90 bp AACCTGAGGCTGGGGGAACCTGCGGTCTGGAGGAACAATGTGAGTTaGGAGCATAAGCCCCTCATGGCTAGACTCAGGTTTCTCTGTGTG +
Preference number: 1 (lower is better)
Translates to: NLRLGEPAVWRNNVS*EHKPLMARLRFLCV
Trigger: CACACAGAGAAACCTGAGTCTAGCCATGAGGGGCTTATGCTCCCAACTCACATTGTTCCTCCAGACCGCAGGTTCCCCCAGCCTCAGGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
3UTR CCA 90 bp TTTCTGGTGGAGACGGCCGTGGTAGGTAAGCATCTGCAGCTCATCTaGAATACTACAGTCTTGAGGACGTGCTTTCCATACGCCCTGTGT +
Preference number: 1 (lower is better)
Translates to: FLVETAVVGKHLQLI*NTTVLRTCFPYALC
Trigger: ACACAGGGCGTATGGAAAGCACGTCCTCAAGACTGTAGTATTCCAGATGAGCTGCAGATGCTTACCTACCACGGCCGTCTCCACCAGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
3UTR-3UTR TCA 90 bp GGAGAGCAAAGGCCTGGAGGGCTCCACGCTCTCAACCGTTCAGGGCTGATGCCCGGGTCTGGCCAACCCTaGCCGAGAGGGCAAAGGGCT +
Preference number: 2 (lower is better)
Translates to: GEQRPGGLHALNRSGLMPGSGQP*PRGQRA
Trigger: AGCCCTTTGCCCTCTCGGTCAGGGTTGGCCAGACCC...GGGCATCAGCCCTGAACGGTTGAGAGCGTGGAGCCCTCCAGGCCTTTGCTCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
3UTR-3UTR TCA 90 bp CAAAGGCCTGGAGGGCTCCACGCTCTCAACCGTTCAGGGCTGATGCCCCTAAGAGGAGGGTGGGGTGAGTaGGGACACCTGGCATGTTCT +
Preference number: 2 (lower is better)
Translates to: QRPGGLHALNRSGLMPLRGGWGE*GHLACS
Trigger: AGAACATGCCAGGTGTCCTCACTCACCCCACCCTCC...TCTTAGGGGCATCAGCCCTGAACGGTTGAGAGCGTGGAGCCCTCCAGGCCTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
3UTR-3UTR TCA 90 bp ATCTGGGCTATGAGTGCTTGGAAGGATCCCAGGCATACACAGAGGGCCACAGCCGGGTCTGGCCAACCCTaGCCGAGAGGGCAAAGGGCT +
Preference number: 2 (lower is better)
Translates to: IWAMSAWKDPRHTQRATAGSGQP*PRGQRA
Trigger: AGCCCTTTGCCCTCTCGGTCAGGGTTGGCCAGACCC...GGCTGTGGCCCTCTGTGTATGCCTGGGATCCTTCCAAGCACTCATAGCCCAGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
3UTR-3UTR TCA 90 bp GGAGAGCAAAGGCCTGGAGGGCTCCACGCTCTCAACCGTTCAGGGCTGATGCCCTCTGGAGGAACAATGTaGGTTGGGAGCATAAGCCCC +
Preference number: 2 (lower is better)
Translates to: GEQRPGGLHALNRSGLMPSGGTM*VGSISP
Trigger: GGGGCTTATGCTCCCAACTCACATTGTTCCTCCAGA...GGGCATCAGCCCTGAACGGTTGAGAGCGTGGAGCCCTCCAGGCCTTTGCTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
3UTR-3UTR TCA 90 bp CTGGGCTATGAGTGCTTGGAAGGATCCCAGGCATACACAGAGGGCCACAGCCAAGTGACACTGCCCCTGTaGCTGGGTCTGGCCAACCCT +
Preference number: 2 (lower is better)
Translates to: LGYECLEGSQAYTEGHSQVTLPL*LGLANP
Trigger: AGGGTTGGCCAGACCCAGTCACAGGGGCAGTGTCAC...TTGGCTGTGGCCCTCTGTGTATGCCTGGGATCCTTCCAAGCACTCATAGCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
3UTR-3UTR GCA 90 bp CAAAGGCCTGGAGGGCTCCACGCTCTCAACCGTTCAGGGCTGATGCCCCTAAGACCCTGGCAGGCAGGATaGAGTCATGTGACAGCTCCA +
Preference number: 2 (lower is better)
Translates to: QRPGGLHALNRSGLMPLRPWQAG*SHVTAP
Trigger: TGGAGCTGTCACATGACTGCATCCTGCCTGCCAGGG...TCTTAGGGGCATCAGCCCTGAACGGTTGAGAGCGTGGAGCCCTCCAGGCCTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
3UTR-3UTR GCA 90 bp GGAGAGCAAAGGCCTGGAGGGCTCCACGCTCTCAACCGTTCAGGGCTGATGCCCATAGAAGCAAGACCTTaGTTTGCAGCCCTGGCAGGC +
Preference number: 2 (lower is better)
Translates to: GEQRPGGLHALNRSGLMPIEARP*FAALAG
Trigger: GCCTGCCAGGGCTGCAAAGCAAGGTCTTGCTTCTAT...GGGCATCAGCCCTGAACGGTTGAGAGCGTGGAGCCCTCCAGGCCTTTGCTCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
3UTR-3UTR CCA 90 bp ATTGGGGAGGGTGGGGTGAGTGAGGACACCTGGCATGTTCTGCGGCCTCTTGGCCTTGCTTTGCAGCCCTaGCAGGCAGGATGCAGTCAT +
Preference number: 2 (lower is better)
Translates to: IGEGGVSEDTWHVLRPLGLALQP*QAGCSH
Trigger: ATGACTGCATCCTGCCTGCCAGGGCTGCAAAGCAAG...GCCAAGAGGCCGCAGAACATGCCAGGTGTCCTCACTCACCCCACCCTCCCCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
3UTR-3UTR CCA 90 bp CTGGGCTATGAGTGCTTGGAAGGATCCCAGGCATACACAGAGGGCCACAGCCAATGGGGGAGGCAGTGCTaGTGCAGTTGGGATGGGGCA +
Preference number: 2 (lower is better)
Translates to: LGYECLEGSQAYTEGHSQWGRQC*CSWDGA
Trigger: TGCCCCATCCCAACTGCACCAGCACTGCCTCCCCCA...TTGGCTGTGGCCCTCTGTGTATGCCTGGGATCCTTCCAAGCACTCATAGCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
3UTR-3UTR TCA 90 bp ATTGGGGAGGGTGGGGTGAGTGAGGACACCTGGCATGTTCTGCGGCCTCTTGGCTCTGGAGGAACAATGTaGGTTGGGAGCATAAGCCCC +
Preference number: 2 (lower is better)
Translates to: IGEGGVSEDTWHVLRPLGSGGTM*VGSISP
Trigger: GGGGCTTATGCTCCCAACTCACATTGTTCCTCCAGA...GCCAAGAGGCCGCAGAACATGCCAGGTGTCCTCACTCACCCCACCCTCCCCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
3UTR-3UTR TCA 90 bp CTGGGCTATGAGTGCTTGGAAGGATCCCAGGCATACACAGAGGGCCACAGCCAAACGGGCATGTGTGTGTaGGGGCTTCTATGTGGCCCC +
Preference number: 2 (lower is better)
Translates to: LGYECLEGSQAYTEGHSQTGMCV*GLLCGP
Trigger: GGGGCCACATAGAAGCCCTCACACACACATGCCCGT...TTGGCTGTGGCCCTCTGTGTATGCCTGGGATCCTTCCAAGCACTCATAGCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
3UTR-3UTR CCA 90 bp CTGGGCTATGAGTGCTTGGAAGGATCCCAGGCATACACAGAGGGCCACAGCCAATGGATGGAGCTGCTGTaGGTGAGTGCAGGGTGCGGT +
Preference number: 2 (lower is better)
Translates to: LGYECLEGSQAYTEGHSQWMELL*VSAGCG
Trigger: ACCGCACCCTGCACTCACCCACAGCAGCTCCATCCA...TTGGCTGTGGCCCTCTGTGTATGCCTGGGATCCTTCCAAGCACTCATAGCCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
3UTR-3UTR GCA 90 bp CAAAGGCCTGGAGGGCTCCACGCTCTCAACCGTTCAGGGCTGATGCCCCTAAGAATAGAAGCAAGACCTTaGTTTGCAGCCCTGGCAGGC +
Preference number: 2 (lower is better)
Translates to: QRPGGLHALNRSGLMPLRIEARP*FAALAG
Trigger: GCCTGCCAGGGCTGCAAAGCAAGGTCTTGCTTCTAT...TCTTAGGGGCATCAGCCCTGAACGGTTGAGAGCGTGGAGCCCTCCAGGCCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
3UTR-3UTR CCA 90 bp ATCTGGGCTATGAGTGCTTGGAAGGATCCCAGGCATACACAGAGGGCCACAGCCCCCCAGTTTTCCCAGTaGATGGAGCTGCTGTGGGTG +
Preference number: 2 (lower is better)
Translates to: IWAMSAWKDPRHTQRATAPQFSQ*MELLWV
Trigger: CACCCACAGCAGCTCCATCCACTGGGAAAACTGGGG...GGCTGTGGCCCTCTGTGTATGCCTGGGATCCTTCCAAGCACTCATAGCCCAGAT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
3UTR-3UTR TCA 90 bp GGTTTTCTGGTGGAGACGGCCGTGGTAGGTAAGCATCTGCAGCTCATCTGGAATGGAGGGTGGGGTGAGTaGGGACACCTGGCATGTTCT +
Preference number: 2 (lower is better)
Translates to: GFLVETAVVGKHLQLIWNGGWGE*GHLACS
Trigger: AGAACATGCCAGGTGTCCTCACTCACCCCACCCTCC...ATTCCAGATGAGCTGCAGATGCTTACCTACCACGGCCGTCTCCACCAGAAAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
3UTR-3UTR TCA 90 bp CTGGGCTATGAGTGCTTGGAAGGATCCCAGGCATACACAGAGGGCCACAGCCAACTGTATTTTCCAGGGTaGCACTGCCCCTGTGACTGG +
Preference number: 2 (lower is better)
Translates to: LGYECLEGSQAYTEGHSQLYFPG*HCPCDW
Trigger: CCAGTCACAGGGGCAGTGTCACCCTGGAAAATACAG...TTGGCTGTGGCCCTCTGTGTATGCCTGGGATCCTTCCAAGCACTCATAGCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
3UTR-3UTR TCA 90 bp ATCTGGGCTATGAGTGCTTGGAAGGATCCCAGGCATACACAGAGGGCCACAGCCCTGTATTTTCCAGGGTaGCACTGCCCCTGTGACTGG +
Preference number: 2 (lower is better)
Translates to: IWAMSAWKDPRHTQRATALYFPG*HCPCDW
Trigger: CCAGTCACAGGGGCAGTGTCACCCTGGAAAATACAG...GGCTGTGGCCCTCTGTGTATGCCTGGGATCCTTCCAAGCACTCATAGCCCAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
3UTR-3UTR GCA 90 bp ATCTGGGCTATGAGTGCTTGGAAGGATCCCAGGCATACACAGAGGGCCACAGCCAGCAAGACCTTGCTTTaGAGCCCTGGCAGGCAGGAT +
Preference number: 2 (lower is better)
Translates to: IWAMSAWKDPRHTQRATASKTLL*SPGRQD
Trigger: ATCCTGCCTGCCAGGGCTGCAAAGCAAGGTCTTGCT...GGCTGTGGCCCTCTGTGTATGCCTGGGATCCTTCCAAGCACTCATAGCCCAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
3UTR-3UTR GCA 90 bp CCTATCTGGGCTATGAGTGCTTGGAAGGATCCCAGGCATACACAGAGGGCCACAACACCTGGCATGTTCTaGGGCCTCTTGGCCTCTCTC +
Preference number: 2 (lower is better)
Translates to: PIWAMSAWKDPRHTQRATTPGMF*GLLASL
Trigger: GAGAGAGGCCAAGAGGCCGCAGAACATGCCAGGTGT...TGTGGCCCTCTGTGTATGCCTGGGATCCTTCCAAGCACTCATAGCCCAGATAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
3UTR-3UTR CCA 90 bp ATCTGGGCTATGAGTGCTTGGAAGGATCCCAGGCATACACAGAGGGCCACAGCCGTGCAGAGACCAGTGTaGGATGTGAGAGGATCCCTG +
Preference number: 2 (lower is better)
Translates to: IWAMSAWKDPRHTQRATAVQRPV*DVRGSL
Trigger: CAGGGATCCTCTCACATCCCACACTGGTCTCTGCAC...GGCTGTGGCCCTCTGTGTATGCCTGGGATCCTTCCAAGCACTCATAGCCCAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
3UTR-3UTR GCA 90 bp GGTTTTCTGGTGGAGACGGCCGTGGTAGGTAAGCATCTGCAGCTCATCTGGAATGAACCAGAGGGGTGGTaGAGAGACCAGTGTGGGATG +
Preference number: 2 (lower is better)
Translates to: GFLVETAVVGKHLQLIWNEPEGW*RDQCGM
Trigger: CATCCCACACTGGTCTCTGCACCACCCCTCTGGTTC...ATTCCAGATGAGCTGCAGATGCTTACCTACCACGGCCGTCTCCACCAGAAAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
3UTR-3UTR CCA 90 bp CCTATCTGGGCTATGAGTGCTTGGAAGGATCCCAGGCATACACAGAGGGCCACAGTGAGTGAGGACACCTaGCATGTTCTGCGGCCTCTT +
Preference number: 2 (lower is better)
Translates to: PIWAMSAWKDPRHTQRATVSEDT*HVLRPL
Trigger: AAGAGGCCGCAGAACATGCCAGGTGTCCTCACTCAC...TGTGGCCCTCTGTGTATGCCTGGGATCCTTCCAAGCACTCATAGCCCAGATAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
3UTR-3UTR CCA 90 bp CCTGTGTCTGGTCTACATGCAGGCGTGTCTTGTGATAAATCCTGTTACGGGCATCACTGCCCCTGTGACTaGGTCTGGCCAACCCTGACC +
Preference number: 2 (lower is better)
Translates to: PVSGLHAGVSCDKSCYGHHCPCD*VWPTLT
Trigger: GGTCAGGGTTGGCCAGACCCAGTCACAGGGGCAGTG...ATGCCCGTAACAGGATTTATCACAAGACACGCCTGCATGTAGACCAGACACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
3UTR-3UTR CCA 90 bp GGTTTTCTGGTGGAGACGGCCGTGGTAGGTAAGCATCTGCAGCTCATCTGGAATCTGGTGCAGTTGGGATaGGGCAGAGATGGAAGTGCG +
Preference number: 2 (lower is better)
Translates to: GFLVETAVVGKHLQLIWNLVQLG*GRDGSA
Trigger: CGCACTTCCATCTCTGCCCCATCCCAACTGCACCAG...ATTCCAGATGAGCTGCAGATGCTTACCTACCACGGCCGTCTCCACCAGAAAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
3UTR-3UTR CCA 90 bp GGTTTTCTGGTGGAGACGGCCGTGGTAGGTAAGCATCTGCAGCTCATCTGGAATCCCCAGTTTTCCCAGTaGATGGAGCTGCTGTGGGTG +
Preference number: 2 (lower is better)
Translates to: GFLVETAVVGKHLQLIWNPQFSQ*MELLWV
Trigger: CACCCACAGCAGCTCCATCCACTGGGAAAACTGGGG...ATTCCAGATGAGCTGCAGATGCTTACCTACCACGGCCGTCTCCACCAGAAAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
3UTR-3UTR CCA 90 bp CCTGTGTCTGGTCTACATGCAGGCGTGTCTTGTGATAAATCCTGTTACGGGCATTGTTCTGCGGCCTCTTaGCCTCTCTCGAGCAGCGTC +
Preference number: 2 (lower is better)
Translates to: PVSGLHAGVSCDKSCYGHCSAAS*PLSSSV
Trigger: GACGCTGCTCGAGAGAGGCCAAGAGGCCGCAGAACA...ATGCCCGTAACAGGATTTATCACAAGACACGCCTGCATGTAGACCAGACACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
3UTR-3UTR CCA 90 bp GGTTTTCTGGTGGAGACGGCCGTGGTAGGTAAGCATCTGCAGCTCATCTGGAATGTGAGTGAGGACACCTaGCATGTTCTGCGGCCTCTT +
Preference number: 2 (lower is better)
Translates to: GFLVETAVVGKHLQLIWNVSEDT*HVLRPL
Trigger: AAGAGGCCGCAGAACATGCCAGGTGTCCTCACTCAC...ATTCCAGATGAGCTGCAGATGCTTACCTACCACGGCCGTCTCCACCAGAAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
3UTR-3UTR CCA 90 bp CCTGTGTCTGGTCTACATGCAGGCGTGTCTTGTGATAAATCCTGTTACGGGCATGGGAGAGCAAAGGCCTaGAGGGCTCCACGCTCTCAA +
Preference number: 2 (lower is better)
Translates to: PVSGLHAGVSCDKSCYGHGRAKA*RAPRSQ
Trigger: TTGAGAGCGTGGAGCCCTCCAGGCCTTTGCTCTCCC...ATGCCCGTAACAGGATTTATCACAAGACACGCCTGCATGTAGACCAGACACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
3UTR-3UTR TCA 90 bp TGTCTGGTCTACATGCAGGCGTGTCTTGTGATAAATCCTGTTACGGGCATGTGTTCAGGTTTCTCTGTGTaGCCCGTTGGAGGCGGGTGG +
Preference number: 2 (lower is better)
Translates to: CLVYMQACLVINPVTGMCSGFSV*PVGGGW
Trigger: CCACCCGCCTCCAACGGGTCACACAGAGAAACCTGA...ACACATGCCCGTAACAGGATTTATCACAAGACACGCCTGCATGTAGACCAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
3UTR-3UTR CCA 90 bp CTGGGCTATGAGTGCTTGGAAGGATCCCAGGCATACACAGAGGGCCACAGCCAAACTAACACTGTGCAGTaGAGTGATGCAAACCCCAGT +
Preference number: 2 (lower is better)
Translates to: LGYECLEGSQAYTEGHSQTNTVQ*SDANPS
Trigger: ACTGGGGTTTGCATCACTCCACTGCACAGTGTTAGT...TTGGCTGTGGCCCTCTGTGTATGCCTGGGATCCTTCCAAGCACTCATAGCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
3UTR CAA 90 bp GCCGTGGTAGGTAAGCATCTGCAGCTCATCTGGAATACTACAGTCTaGAGGACGTGCTTTCCATACGCCCTGTGTCTGGTCTACATGCAG +
Preference number: 2 (lower is better)
Translates to: AVVGKHLQLIWNTTV*RTCFPYALCLVYMQ
Trigger: CTGCATGTAGACCAGACACAGGGCGTATGGAAAGCACGTCCTCAAGACTGTAGTATTCCAGATGAGCTGCAGATGCTTACCTACCACGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
3UTR CAA 90 bp ATTTATTTGGGAGGAGCAGAGGATTCCTATCTGGGCTATGAGTGCTaGGAAGGATCCCAGGCATACACAGAGGGCCACAGCCAAGGGGAA +
Preference number: 2 (lower is better)
Translates to: IYLGGAEDSYLGYEC*EGSQAYTEGHSQGE
Trigger: TTCCCCTTGGCTGTGGCCCTCTGTGTATGCCTGGGATCCTTCCAAGCACTCATAGCCCAGATAGGAATCCTCTGCTCCTCCCAAATAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
3UTR-3UTR GCA 90 bp TGTCTGGTCTACATGCAGGCGTGTCTTGTGATAAATCCTGTTACGGGCATGTGTGAACCAGAGGGGTGGTaGAGAGACCAGTGTGGGATG +
Preference number: 2 (lower is better)
Translates to: CLVYMQACLVINPVTGMCEPEGW*RDQCGM
Trigger: CATCCCACACTGGTCTCTGCACCACCCCTCTGGTTC...ACACATGCCCGTAACAGGATTTATCACAAGACACGCCTGCATGTAGACCAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
3UTR-3UTR TCA 90 bp TGTCTGGTCTACATGCAGGCGTGTCTTGTGATAAATCCTGTTACGGGCATGTGTCAGGATGCAGTCATGTaGCAGCTCCAGCAACCTGAG +
Preference number: 2 (lower is better)
Translates to: CLVYMQACLVINPVTGMCQDAVM*QLQQPE
Trigger: CTCAGGTTGCTGGAGCTGTCACATGACTGCATCCTG...ACACATGCCCGTAACAGGATTTATCACAAGACACGCCTGCATGTAGACCAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
3UTR-3UTR GCA 90 bp TGTCTGGTCTACATGCAGGCGTGTCTTGTGATAAATCCTGTTACGGGCATGTGTAGCAAGACCTTGCTTTaGAGCCCTGGCAGGCAGGAT +
Preference number: 2 (lower is better)
Translates to: CLVYMQACLVINPVTGMCSKTLL*SPGRQD
Trigger: ATCCTGCCTGCCAGGGCTGCAAAGCAAGGTCTTGCT...ACACATGCCCGTAACAGGATTTATCACAAGACACGCCTGCATGTAGACCAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
3UTR-3UTR CCA 90 bp GGTTTTCTGGTGGAGACGGCCGTGGTAGGTAAGCATCTGCAGCTCATCTGGAATACTAACACTGTGCAGTaGAGTGATGCAAACCCCAGT +
Preference number: 2 (lower is better)
Translates to: GFLVETAVVGKHLQLIWNTNTVQ*SDANPS
Trigger: ACTGGGGTTTGCATCACTCCACTGCACAGTGTTAGT...ATTCCAGATGAGCTGCAGATGCTTACCTACCACGGCCGTCTCCACCAGAAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
3UTR-3UTR TCA 90 bp TGTCTGGTCTACATGCAGGCGTGTCTTGTGATAAATCCTGTTACGGGCATGTGTTCTGGAGGAACAATGTaGGTTGGGAGCATAAGCCCC +
Preference number: 2 (lower is better)
Translates to: CLVYMQACLVINPVTGMCSGGTM*VGSISP
Trigger: GGGGCTTATGCTCCCAACTCACATTGTTCCTCCAGA...ACACATGCCCGTAACAGGATTTATCACAAGACACGCCTGCATGTAGACCAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
3UTR-3UTR TCA 90 bp GGTTTTCTGGTGGAGACGGCCGTGGTAGGTAAGCATCTGCAGCTCATCTGGAATAGAGTTTGGCATAAGTaGCTCCATTTTGGTTCCAGC +
Preference number: 2 (lower is better)
Translates to: GFLVETAVVGKHLQLIWNRVWHK*LHFGSS
Trigger: GCTGGAACCAAAATGGAGTCACTTATGCCAAACTCT...ATTCCAGATGAGCTGCAGATGCTTACCTACCACGGCCGTCTCCACCAGAAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
3UTR-3UTR GCA 90 bp TGTCTGGTCTACATGCAGGCGTGTCTTGTGATAAATCCTGTTACGGGCATGTGTAGAAGTCAAGGGACTTaGCCCCAGGTCCCACTAACA +
Preference number: 2 (lower is better)
Translates to: CLVYMQACLVINPVTGMCRSQGT*PQVPLT
Trigger: TGTTAGTGGGACCTGGGGGCAAGTCCCTTGACTTCT...ACACATGCCCGTAACAGGATTTATCACAAGACACGCCTGCATGTAGACCAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
3UTR-3UTR GCA 90 bp AAGCTTTTAAAGGACAGAAGTCCATGTAAGCAGCTTTTAAACAAGGTTTGTAAGTGGGTGAGTGCAGGGTaGGGTGTGAACCAGAGGGGT +
Preference number: 2 (lower is better)
Translates to: KLLKDRSPCKQLLNKVCKWVSAG*GVNQRG
Trigger: ACCCCTCTGGTTCACACCGCACCCTGCACTCACCCA...CTTACAAACCTTGTTTAAAAGCTGCTTACATGGACTTCTGTCCTTTAAAAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
3UTR-3UTR GCA 90 bp AAGCTTTTAAAGGACAGAAGTCCATGTAAGCAGCTTTTAAACAAGGTTTGTAAGACACCTGGCATGTTCTaGGGCCTCTTGGCCTCTCTC +
Preference number: 2 (lower is better)
Translates to: KLLKDRSPCKQLLNKVCKTPGMF*GLLASL
Trigger: GAGAGAGGCCAAGAGGCCGCAGAACATGCCAGGTGT...CTTACAAACCTTGTTTAAAAGCTGCTTACATGGACTTCTGTCCTTTAAAAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
3UTR-3UTR CCA 90 bp AAGCTTTTAAAGGACAGAAGTCCATGTAAGCAGCTTTTAAACAAGGTTTGTAAGCCCCAGTTTTCCCAGTaGATGGAGCTGCTGTGGGTG +
Preference number: 2 (lower is better)
Translates to: KLLKDRSPCKQLLNKVCKPQFSQ*MELLWV
Trigger: CACCCACAGCAGCTCCATCCACTGGGAAAACTGGGG...CTTACAAACCTTGTTTAAAAGCTGCTTACATGGACTTCTGTCCTTTAAAAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
3UTR-3UTR CAA 90 bp GGAGAGCAAAGGCCTGGAGGGCTCCACGCTCTCAACCGTTCAGGGCTGATGCCCAAGCAAGACCTTGCTTaGCAGCCCTGGCAGGCAGGA +
Preference number: 3 (lower is better)
Translates to: GEQRPGGLHALNRSGLMPKQDLA*QPWQAG
Trigger: TCCTGCCTGCCAGGGCTGCAAAGCAAGGTCTTGCTT...GGGCATCAGCCCTGAACGGTTGAGAGCGTGGAGCCCTCCAGGCCTTTGCTCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
3UTR TCA 72 bp CAGGGCACTGTATTTTCCAGGGTGACACTGCCCCTGTaGCTGGGTCTGGCCAACCCTGACCGAGAGGGCAAA +
Preference number: 3 (lower is better)
Translates to: QGTVFSRVTLPL*LGLANPDREGK
Trigger: TTTGCCCTCTCGGTCAGGGTTGGCCAGACCCAGTCACAGGGGCAGTGTCACCCTGGAAAATACAGTGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
3UTR CCA 72 bp AGCTCCAGCAACCTGAGGCTGGGGGAACCTGCGGTCTaGAGGAACAATGTGAGTTGGGAGCATAAGCCCCTC +
Preference number: 3 (lower is better)
Translates to: SSSNLRLGEPAV*RNNVSWEHKPL
Trigger: GAGGGGCTTATGCTCCCAACTCACATTGTTCCTCCAGACCGCAGGTTCCCCCAGCCTCAGGTTGCTGGAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000531248.1
ENST00000673966.1
3UTR-3UTR CAA 90 bp CAAAGGCCTGGAGGGCTCCACGCTCTCAACCGTTCAGGGCTGATGCCCCTAAGAGATAGAAGCAAGACCTaGCTTTGCAGCCCTGGCAGG +
Preference number: 3 (lower is better)
Translates to: QRPGGLHALNRSGLMPLRDRSKT*LCSPGR
Trigger: CCTGCCAGGGCTGCAAAGCAAGGTCTTGCTTCTATC...TCTTAGGGGCATCAGCCCTGAACGGTTGAGAGCGTGGAGCCCTCCAGGCCTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
3UTR-3UTR CAA 90 bp CCTATCTGGGCTATGAGTGCTTGGAAGGATCCCAGGCATACACAGAGGGCCACAATGTTCTGCGGCCTCTaGGCCTCTCTCGAGCAGCGT +
Preference number: 3 (lower is better)
Translates to: PIWAMSAWKDPRHTQRATMFCGL*ASLEQR
Trigger: ACGCTGCTCGAGAGAGGCCAAGAGGCCGCAGAACAT...TGTGGCCCTCTGTGTATGCCTGGGATCCTTCCAAGCACTCATAGCCCAGATAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
3UTR CCA 72 bp GAGGAGCAGAGGATTCCTATCTGGGCTATGAGTGCTTaGAAGGATCCCAGGCATACACAGAGGGCCACAGCC +
Preference number: 3 (lower is better)
Translates to: EEQRIPIWAMSA*KDPRHTQRATA
Trigger: GGCTGTGGCCCTCTGTGTATGCCTGGGATCCTTCCAAGCACTCATAGCCCAGATAGGAATCCTCTGCTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
3UTR-3UTR CAA 90 bp GGTTTTCTGGTGGAGACGGCCGTGGTAGGTAAGCATCTGCAGCTCATCTGGAATGAGAAGTCAAGGGACTaGCCCCCAGGTCCCACTAAC +
Preference number: 3 (lower is better)
Translates to: GFLVETAVVGKHLQLIWNEKSRD*PPGPTN
Trigger: GTTAGTGGGACCTGGGGGCAAGTCCCTTGACTTCTC...ATTCCAGATGAGCTGCAGATGCTTACCTACCACGGCCGTCTCCACCAGAAAACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
3UTR TCA 72 bp TTATTTGGGAGGAGCAGAGGATTCCTATCTGGGCTATaGGTGCTTGGAAGGATCCCAGGCATACACAGAGGG +
Preference number: 3 (lower is better)
Translates to: LFGRSRGFLSGL*VLGRIPGIHRG
Trigger: CCCTCTGTGTATGCCTGGGATCCTTCCAAGCACTCATAGCCCAGATAGGAATCCTCTGCTCCTCCCAAATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
3UTR GCA 72 bp CTGCAGCTCATCTGGAATACTACAGTCTTGAGGACGTaGTTTCCATACGCCCTGTGTCTGGTCTACATGCAG +
Preference number: 3 (lower is better)
Translates to: LQLIWNTTVLRT*FPYALCLVYMQ
Trigger: CTGCATGTAGACCAGACACAGGGCGTATGGAAAGCACGTCCTCAAGACTGTAGTATTCCAGATGAGCTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
3UTR CCA 72 bp GAGACGGCCGTGGTAGGTAAGCATCTGCAGCTCATCTaGAATACTACAGTCTTGAGGACGTGCTTTCCATAC +
Preference number: 3 (lower is better)
Translates to: ETAVVGKHLQLI*NTTVLRTCFPY
Trigger: GTATGGAAAGCACGTCCTCAAGACTGTAGTATTCCAGATGAGCTGCAGATGCTTACCTACCACGGCCGTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
3UTR-3UTR CAA 90 bp CTGGGCTATGAGTGCTTGGAAGGATCCCAGGCATACACAGAGGGCCACAGCCAAATAAGTGACTCCATTTaGGTTCCAGCAACTTTCACA +
Preference number: 3 (lower is better)
Translates to: LGYECLEGSQAYTEGHSQISDSI*VPATFT
Trigger: TGTGAAAGTTGCTGGAACCAAAATGGAGTCACTTAT...TTGGCTGTGGCCCTCTGTGTATGCCTGGGATCCTTCCAAGCACTCATAGCCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
3UTR TCA 72 bp GTAAGCATCTGCAGCTCATCTGGAATACTACAGTCTTaGGGACGTGCTTTCCATACGCCCTGTGTCTGGTCT +
Preference number: 3 (lower is better)
Translates to: VSICSSSGILQS*GRAFHTPCVWS
Trigger: AGACCAGACACAGGGCGTATGGAAAGCACGTCCTCAAGACTGTAGTATTCCAGATGAGCTGCAGATGCTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
3UTR CCA 72 bp GATGAATTTATTTGGGAGGAGCAGAGGATTCCTATCTaGGCTATGAGTGCTTGGAAGGATCCCAGGCATACA +
Preference number: 3 (lower is better)
Translates to: DEFIWEEQRIPI*AMSAWKDPRHT
Trigger: TGTATGCCTGGGATCCTTCCAAGCACTCATAGCCCAGATAGGAATCCTCTGCTCCTCCCAAATAAATTCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
3UTR-3UTR CAA 90 bp CCTGTGTCTGGTCTACATGCAGGCGTGTCTTGTGATAAATCCTGTTACGGGCATATAAGTGACTCCATTTaGGTTCCAGCAACTTTCACA +
Preference number: 3 (lower is better)
Translates to: PVSGLHAGVSCDKSCYGHISDSI*VPATFT
Trigger: TGTGAAAGTTGCTGGAACCAAAATGGAGTCACTTAT...ATGCCCGTAACAGGATTTATCACAAGACACGCCTGCATGTAGACCAGACACAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
3UTR-3UTR CAA 90 bp AAGCTTTTAAAGGACAGAAGTCCATGTAAGCAGCTTTTAAACAAGGTTTGTAAGAAGCAAGACCTTGCTTaGCAGCCCTGGCAGGCAGGA +
Preference number: 3 (lower is better)
Translates to: KLLKDRSPCKQLLNKVCKKQDLA*QPWQAG
Trigger: TCCTGCCTGCCAGGGCTGCAAAGCAAGGTCTTGCTT...CTTACAAACCTTGTTTAAAAGCTGCTTACATGGACTTCTGTCCTTTAAAAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR TCA 90 bp CAGCTCCAGCAACCTGAGGCTGGGGGAACCTGCGGTCTGGAGGAACAATGTGAGGCGTGCGCCCTCAGTTaGAGGCCTCACGCAGCCGCC +
Preference number: 4 (lower is better)
Translates to: QLQQPEAGGTCGLEEQCEACALS*RPHAAA
Trigger: GGCGGCTGCGTGAGGCCTTCAACTGAGGGCGCACGC...CTCACATTGTTCCTCCAGACCGCAGGTTCCCCCAGCCTCAGGTTGCTGGAGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR TCA 90 bp TGCCCCTGTGACTGGGTCTGGCCAACCCTGACCGAGAGGGCAAAGGGCTGGAATGGGTCTGGCCAACCCTaGCCGAGAGGGCAAAGGGCT +
Preference number: 4 (lower is better)
Translates to: CPCDWVWPTLTERAKGWNGSGQP*PRGQRA
Trigger: AGCCCTTTGCCCTCTCGGTCAGGGTTGGCCAGACCC...ATTCCAGCCCTTTGCCCTCTCGGTCAGGGTTGGCCAGACCCAGTCACAGGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR GCA 90 bp GGAGAGCAAAGGCCTGGAGGGCTCCACGCTCTCAACCGTTCAGGGCTGATGCCCCCCAGGCCTCAGCCCTaGTCTGCTGACTGCGATCCT +
Preference number: 4 (lower is better)
Translates to: GEQRPGGLHALNRSGLMPPRPQP*SADCDP
Trigger: AGGATCGCAGTCAGCAGAGCAGGGCTGAGGCCTGGG...GGGCATCAGCCCTGAACGGTTGAGAGCGTGGAGCCCTCCAGGCCTTTGCTCTCC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000349015.7
ENST00000673966.1
CDS-3UTR CCA 90 bp GGAGAGCAAAGGCCTGGAGGGCTCCACGCTCTCAACCGTTCAGGGCTGATGCCCCACTGCCCCTGTGACTaGGTCTGGCCAACCCTGACC +
Preference number: 4 (lower is better)
Translates to: GEQRPGGLHALNRSGLMPHCPCD*VWPTLT
Trigger: GGTCAGGGTTGGCCAGACCCAGTCACAGGGGCAGTG...GGGCATCAGCCCTGAACGGTTGAGAGCGTGGAGCCCTCCAGGCCTTTGCTCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR TCA 90 bp CTGGGCTATGAGTGCTTGGAAGGATCCCAGGCATACACAGAGGGCCACAGCCAAGCGTGCGCCCTCAGTTaGAGGCCTCACGCAGCCGCC +
Preference number: 4 (lower is better)
Translates to: LGYECLEGSQAYTEGHSQACALS*RPHAAA
Trigger: GGCGGCTGCGTGAGGCCTTCAACTGAGGGCGCACGC...TTGGCTGTGGCCCTCTGTGTATGCCTGGGATCCTTCCAAGCACTCATAGCCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR GCA 90 bp CCCCCAGATAGAAGCAAGACCTTGCTTTGCAGCCCTGGCAGGCAGGATGCAGTCTCCCAGCGTGGGCTCTaGCCCTGGGTCCTTCGCTGC +
Preference number: 4 (lower is better)
Translates to: PPDRSKTLLCSPGRQDAVSQRGL*PWVLRC
Trigger: GCAGCGAAGGACCCAGGGGCAGAGCCCACGCTGGGA...GACTGCATCCTGCCTGCCAGGGCTGCAAAGCAAGGTCTTGCTTCTATCTGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000349015.7
CDS-3UTR GCA 90 bp GGAGAGCAAAGGCCTGGAGGGCTCCACGCTCTCAACCGTTCAGGGCTGATGCCCAGCTCTGGGAGCCCATaGCCCAGCGTAACAGCTGCT +
Preference number: 4 (lower is better)
Translates to: GEQRPGGLHALNRSGLMPSSGSP*PSVTAA
Trigger: AGCAGCTGTTACGCTGGGGCATGGGCTCCCAGAGCT...GGGCATCAGCCCTGAACGGTTGAGAGCGTGGAGCCCTCCAGGCCTTTGCTCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR CCA 90 bp GGAGAGCAAAGGCCTGGAGGGCTCCACGCTCTCAACCGTTCAGGGCTGATGCCCCAAAGCTGCCGCTGCTaGTCCGCTCCAGCATCTGGT +
Preference number: 4 (lower is better)
Translates to: GEQRPGGLHALNRSGLMPQSCRC*SAPASG
Trigger: ACCAGATGCTGGAGCGGACCAGCAGCGGCAGCTTTG...GGGCATCAGCCCTGAACGGTTGAGAGCGTGGAGCCCTCCAGGCCTTTGCTCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR CCA 90 bp CAGCAACCTGAGGCTGGGGGAACCTGCGGTCTGGAGGAACAATGTGAGTTGGGACCCGTTGGAGGCGGGTaGGACGCTCACAGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: QQPEAGGTCGLEEQCELGPVGGG*DAHRRV
Trigger: CACCCTCCTGTGAGCGTCCCACCCGCCTCCAACGGG...TCCCAACTCACATTGTTCCTCCAGACCGCAGGTTCCCCCAGCCTCAGGTTGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000531248.1
ENST00000673966.1
CDS-3UTR CCA 90 bp AGGCTGGGGGAACCTGCGGTCTGGAGGAACAATGTGAGTTGGGAGCATAAGCCCCCCGTTGGAGGCGGGTaGGACGCTCACAGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: RLGEPAVWRNNVSWEHKPPVGGG*DAHRRV
Trigger: CACCCTCCTGTGAGCGTCCCACCCGCCTCCAACGGG...GGGCTTATGCTCCCAACTCACATTGTTCCTCCAGACCGCAGGTTCCCCCAGCCT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000531248.1
ENST00000673966.1
CDS-3UTR CCA 90 bp ATTGGGGAGGGTGGGGTGAGTGAGGACACCTGGCATGTTCTGCGGCCTCTTGGCCTCTGTGTGACCCGTTaGAGGCGGGTGGGACGCTCA +
Preference number: 4 (lower is better)
Translates to: IGEGGVSEDTWHVLRPLGLCVTR*RRVGRS
Trigger: TGAGCGTCCCACCCGCCTCCAACGGGTCACACAGAG...GCCAAGAGGCCGCAGAACATGCCAGGTGTCCTCACTCACCCCACCCTCCCCAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR CCA 90 bp TGCCCCTGTGACTGGGTCTGGCCAACCCTGACCGAGAGGGCAAAGGGCTGGAATCACTGCCCCTGTGACTaGGTCTGGCCAACCCTGACC +
Preference number: 4 (lower is better)
Translates to: CPCDWVWPTLTERAKGWNHCPCD*VWPTLT
Trigger: GGTCAGGGTTGGCCAGACCCAGTCACAGGGGCAGTG...ATTCCAGCCCTTTGCCCTCTCGGTCAGGGTTGGCCAGACCCAGTCACAGGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR CCA 90 bp CAGCAACCTGAGGCTGGGGGAACCTGCGGTCTGGAGGAACAATGTGAGTTGGGACGGCCCATCCCACTGTaGCAGGGCCAGGGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: QQPEAGGTCGLEEQCELGRPIPL*QGQGLL
Trigger: GAGAAGCCCCTGGCCCTGCCACAGTGGGATGGGCCG...TCCCAACTCACATTGTTCCTCCAGACCGCAGGTTCCCCCAGCCTCAGGTTGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531248.1
CDS-3UTR CCA 90 bp CAGCAACCTGAGGCTGGGGGAACCTGCGGTCTGGAGGAACAATGTGAGTTGGGAGGTCCATCCCCAGCGTaGGCTCTGCCCCTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: QQPEAGGTCGLEEQCELGGPSPA*ALPLGP
Trigger: AGGACCCAGGGGCAGAGCCCACGCTGGGGATGGACC...TCCCAACTCACATTGTTCCTCCAGACCGCAGGTTCCCCCAGCCTCAGGTTGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000673966.1
CDS-3UTR TCA 90 bp TGCCCCTGTGACTGGGTCTGGCCAACCCTGACCGAGAGGGCAAAGGGCTGGAATGGAGGGTGGGGTGAGTaGGGACACCTGGCATGTTCT +
Preference number: 4 (lower is better)
Translates to: CPCDWVWPTLTERAKGWNGGWGE*GHLACS
Trigger: AGAACATGCCAGGTGTCCTCACTCACCCCACCCTCC...ATTCCAGCCCTTTGCCCTCTCGGTCAGGGTTGGCCAGACCCAGTCACAGGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR TCA 90 bp CAACCTGAGGCTGGGGGAACCTGCGGTCTGGAGGAACAATGTGAGTTGGGAGCAGGGTCTGGCCAACCCTaGCCGAGAGGGCAAAGGGCT +
Preference number: 4 (lower is better)
Translates to: QPEAGGTCGLEEQCELGAGSGQP*PRGQRA
Trigger: AGCCCTTTGCCCTCTCGGTCAGGGTTGGCCAGACCC...TGCTCCCAACTCACATTGTTCCTCCAGACCGCAGGTTCCCCCAGCCTCAGGTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR TCA 90 bp CAGCTCCAGCAACCTGAGGCTGGGGGAACCTGCGGTCTGGAGGAACAATGTGAGGTGACACTGCCCCTGTaGCTGGGTCTGGCCAACCCT +
Preference number: 4 (lower is better)
Translates to: QLQQPEAGGTCGLEEQCEVTLPL*LGLANP
Trigger: AGGGTTGGCCAGACCCAGTCACAGGGGCAGTGTCAC...CTCACATTGTTCCTCCAGACCGCAGGTTCCCCCAGCCTCAGGTTGCTGGAGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR TCA 90 bp TGCCCCTGTGACTGGGTCTGGCCAACCCTGACCGAGAGGGCAAAGGGCTGGAATACGGGCATGTGTGTGTaGGGGCTTCTATGTGGCCCC +
Preference number: 4 (lower is better)
Translates to: CPCDWVWPTLTERAKGWNTGMCV*GLLCGP
Trigger: GGGGCCACATAGAAGCCCTCACACACACATGCCCGT...ATTCCAGCCCTTTGCCCTCTCGGTCAGGGTTGGCCAGACCCAGTCACAGGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR GCA 90 bp TGCCCCTGTGACTGGGTCTGGCCAACCCTGACCGAGAGGGCAAAGGGCTGGAATCTCCAAAGCTGCCGCTaGTGGTCCGCTCCAGCATCT +
Preference number: 4 (lower is better)
Translates to: CPCDWVWPTLTERAKGWNLQSCR*WSAPAS
Trigger: AGATGCTGGAGCGGACCAGCAGCGGCAGCTTTGGAG...ATTCCAGCCCTTTGCCCTCTCGGTCAGGGTTGGCCAGACCCAGTCACAGGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR GCA 90 bp ATTGGGGAGGGTGGGGTGAGTGAGGACACCTGGCATGTTCTGCGGCCTCTTGGCCATTGCCTCCAAAGCTaGCGCTGCTGGTCCGCTCCA +
Preference number: 4 (lower is better)
Translates to: IGEGGVSEDTWHVLRPLGHCLQS*RCWSAP
Trigger: TGGAGCGGACCAGCAGCGGCAGCTTTGGAGGCAATG...GCCAAGAGGCCGCAGAACATGCCAGGTGTCCTCACTCACCCCACCCTCCCCAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR GCA 90 bp GGAGAGCAAAGGCCTGGAGGGCTCCACGCTCTCAACCGTTCAGGGCTGATGCCCGCCAGGACCTATAGCTaGTCGGTGTCTGCCCTGTTC +
Preference number: 4 (lower is better)
Translates to: GEQRPGGLHALNRSGLMPARTYS*SVSALF
Trigger: GAACAGGGCAGACACCGAGCAGCTATAGGTCCTGGC...GGGCATCAGCCCTGAACGGTTGAGAGCGTGGAGCCCTCCAGGCCTTTGCTCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673966.1
CDS-3UTR CCA 90 bp ATCTGGGCTATGAGTGCTTGGAAGGATCCCAGGCATACACAGAGGGCCACAGCCGGGTCCATCCCAGCGTaGGCTCTGCCCCTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: IWAMSAWKDPRHTQRATAGSIPA*ALPLGP
Trigger: AGGACCCAGGGGCAGAGCCCACGCTGGGATGGACCC...GGCTGTGGCCCTCTGTGTATGCCTGGGATCCTTCCAAGCACTCATAGCCCAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349015.7
CDS-3UTR CCA 90 bp CAAAGGCCTGGAGGGCTCCACGCTCTCAACCGTTCAGGGCTGATGCCCCTAAGAGGCTTATGCAGGTCCTaGGCCAGCACGTCGCGCAGA +
Preference number: 4 (lower is better)
Translates to: QRPGGLHALNRSGLMPLRGLCRS*ASTSRR
Trigger: TCTGCGCGACGTGCTGGCCCAGGACCTGCATAAGCC...TCTTAGGGGCATCAGCCCTGAACGGTTGAGAGCGTGGAGCCCTCCAGGCCTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR CCA 90 bp CAGCAACCTGAGGCTGGGGGAACCTGCGGTCTGGAGGAACAATGTGAGTTGGGACGTCCACCAGCACCGTaGGGGCGATGTAGCGATCGC +
Preference number: 4 (lower is better)
Translates to: QQPEAGGTCGLEEQCELGRPPAP*GRCSDR
Trigger: GCGATCGCTACATCGCCCCCACGGTGCTGGTGGACG...TCCCAACTCACATTGTTCCTCCAGACCGCAGGTTCCCCCAGCCTCAGGTTGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000531248.1
ENST00000673966.1
CDS-3UTR CCA 90 bp CAACCTGAGGCTGGGGGAACCTGCGGTCTGGAGGAACAATGTGAGTTGGGAGCACGTCCACCAGCACCGTaGGGGCGATGTAGCGATCGC +
Preference number: 4 (lower is better)
Translates to: QPEAGGTCGLEEQCELGARPPAP*GRCSDR
Trigger: GCGATCGCTACATCGCCCCCACGGTGCTGGTGGACG...TGCTCCCAACTCACATTGTTCCTCCAGACCGCAGGTTCCCCCAGCCTCAGGTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000531248.1
ENST00000673966.1
CDS-3UTR CCA 90 bp CCCCCAGATAGAAGCAAGACCTTGCTTTGCAGCCCTGGCAGGCAGGATGCAGTCCGTCCACCAGCACCGTaGGGGCGATGTAGCGATCGC +
Preference number: 4 (lower is better)
Translates to: PPDRSKTLLCSPGRQDAVRPPAP*GRCSDR
Trigger: GCGATCGCTACATCGCCCCCACGGTGCTGGTGGACG...GACTGCATCCTGCCTGCCAGGGCTGCAAAGCAAGGTCTTGCTTCTATCTGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR CCA 90 bp GGAGAGCAAAGGCCTGGAGGGCTCCACGCTCTCAACCGTTCAGGGCTGATGCCCGTCCGCTCCAGCATCTaGTTCACAACCTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: GEQRPGGLHALNRSGLMPVRSSI*FTTWLL
Trigger: CAGCAGCCAGGTTGTGAACCAGATGCTGGAGCGGAC...GGGCATCAGCCCTGAACGGTTGAGAGCGTGGAGCCCTCCAGGCCTTTGCTCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR CCA 90 bp TGCCCCTGTGACTGGGTCTGGCCAACCCTGACCGAGAGGGCAAAGGGCTGGAATCAAAGCTGCCGCTGCTaGTCCGCTCCAGCATCTGGT +
Preference number: 4 (lower is better)
Translates to: CPCDWVWPTLTERAKGWNQSCRC*SAPASG
Trigger: ACCAGATGCTGGAGCGGACCAGCAGCGGCAGCTTTG...ATTCCAGCCCTTTGCCCTCTCGGTCAGGGTTGGCCAGACCCAGTCACAGGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR CCA 90 bp CAACCTGAGGCTGGGGGAACCTGCGGTCTGGAGGAACAATGTGAGTTGGGAGCAAGGAGGGTGCAGCTCTaGGAGCCCATGCCCCAGCGT +
Preference number: 4 (lower is better)
Translates to: QPEAGGTCGLEEQCELGARRVQL*EPMPQR
Trigger: ACGCTGGGGCATGGGCTCCCAGAGCTGCACCCTCCT...TGCTCCCAACTCACATTGTTCCTCCAGACCGCAGGTTCCCCCAGCCTCAGGTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000531248.1
ENST00000673966.1
CDS-3UTR CCA 90 bp CAGCAACCTGAGGCTGGGGGAACCTGCGGTCTGGAGGAACAATGTGAGTTGGGAAGGAGGGTGCAGCTCTaGGAGCCCATGCCCCAGCGT +
Preference number: 4 (lower is better)
Translates to: QQPEAGGTCGLEEQCELGRRVQL*EPMPQR
Trigger: ACGCTGGGGCATGGGCTCCCAGAGCTGCACCCTCCT...TCCCAACTCACATTGTTCCTCCAGACCGCAGGTTCCCCCAGCCTCAGGTTGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000531248.1
ENST00000673966.1
CDS-3UTR CCA 90 bp CAAAGGCCTGGAGGGCTCCACGCTCTCAACCGTTCAGGGCTGATGCCCCTAAGACTCTGTGTGACCCGTTaGAGGCGGGTGGGACGCTCA +
Preference number: 4 (lower is better)
Translates to: QRPGGLHALNRSGLMPLRLCVTR*RRVGRS
Trigger: TGAGCGTCCCACCCGCCTCCAACGGGTCACACAGAG...TCTTAGGGGCATCAGCCCTGAACGGTTGAGAGCGTGGAGCCCTCCAGGCCTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR CCA 90 bp CAAAGGCCTGGAGGGCTCCACGCTCTCAACCGTTCAGGGCTGATGCCCCTAAGACCCTGTGACTGGGTCTaGCCAACCCTGACCGAGAGG +
Preference number: 4 (lower is better)
Translates to: QRPGGLHALNRSGLMPLRPCDWV*PTLTER
Trigger: CCTCTCGGTCAGGGTTGGCCAGACCCAGTCACAGGG...TCTTAGGGGCATCAGCCCTGAACGGTTGAGAGCGTGGAGCCCTCCAGGCCTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR CCA 90 bp TGCCCCTGTGACTGGGTCTGGCCAACCCTGACCGAGAGGGCAAAGGGCTGGAATGGGAGAGCAAAGGCCTaGAGGGCTCCACGCTCTCAA +
Preference number: 4 (lower is better)
Translates to: CPCDWVWPTLTERAKGWNGRAKA*RAPRSQ
Trigger: TTGAGAGCGTGGAGCCCTCCAGGCCTTTGCTCTCCC...ATTCCAGCCCTTTGCCCTCTCGGTCAGGGTTGGCCAGACCCAGTCACAGGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR CCA 90 bp CAAAGGCCTGGAGGGCTCCACGCTCTCAACCGTTCAGGGCTGATGCCCCTAAGATGGGGGAGGCAGTGCTaGTGCAGTTGGGATGGGGCA +
Preference number: 4 (lower is better)
Translates to: QRPGGLHALNRSGLMPLRWGRQC*CSWDGA
Trigger: TGCCCCATCCCAACTGCACCAGCACTGCCTCCCCCA...TCTTAGGGGCATCAGCCCTGAACGGTTGAGAGCGTGGAGCCCTCCAGGCCTTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR CCA 90 bp TGCCCCTGTGACTGGGTCTGGCCAACCCTGACCGAGAGGGCAAAGGGCTGGAATTGGATGGAGCTGCTGTaGGTGAGTGCAGGGTGCGGT +
Preference number: 4 (lower is better)
Translates to: CPCDWVWPTLTERAKGWNWMELL*VSAGCG
Trigger: ACCGCACCCTGCACTCACCCACAGCAGCTCCATCCA...ATTCCAGCCCTTTGCCCTCTCGGTCAGGGTTGGCCAGACCCAGTCACAGGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR TCA 90 bp GGTTTTCTGGTGGAGACGGCCGTGGTAGGTAAGCATCTGCAGCTCATCTGGAATGCGTGCGCCCTCAGTTaGAGGCCTCACGCAGCCGCC +
Preference number: 4 (lower is better)
Translates to: GFLVETAVVGKHLQLIWNACALS*RPHAAA
Trigger: GGCGGCTGCGTGAGGCCTTCAACTGAGGGCGCACGC...ATTCCAGATGAGCTGCAGATGCTTACCTACCACGGCCGTCTCCACCAGAAAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR TCA 90 bp CAAAGGCCTGGAGGGCTCCACGCTCTCAACCGTTCAGGGCTGATGCCCCTAAGAGCCCTGGCTGATTTCTaGCGGCTTCAGCACCACGCA +
Preference number: 4 (lower is better)
Translates to: QRPGGLHALNRSGLMPLRALADF*RLQHHA
Trigger: TGCGTGGTGCTGAAGCCGTCAGAAATCAGCCAGGGC...TCTTAGGGGCATCAGCCCTGAACGGTTGAGAGCGTGGAGCCCTCCAGGCCTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR TCA 90 bp CAGCTCCAGCAACCTGAGGCTGGGGGAACCTGCGGTCTGGAGGAACAATGTGAGTCAGGTTTCTCTGTGTaGCCCGTTGGAGGCGGGTGG +
Preference number: 4 (lower is better)
Translates to: QLQQPEAGGTCGLEEQCESGFSV*PVGGGW
Trigger: CCACCCGCCTCCAACGGGTCACACAGAGAAACCTGA...CTCACATTGTTCCTCCAGACCGCAGGTTCCCCCAGCCTCAGGTTGCTGGAGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000531248.1
ENST00000673966.1
CDS-3UTR TCA 90 bp CCCCCAGATAGAAGCAAGACCTTGCTTTGCAGCCCTGGCAGGCAGGATGCAGTCGTGACACTGCCCCTGTaGCTGGGTCTGGCCAACCCT +
Preference number: 4 (lower is better)
Translates to: PPDRSKTLLCSPGRQDAVVTLPL*LGLANP
Trigger: AGGGTTGGCCAGACCCAGTCACAGGGGCAGTGTCAC...GACTGCATCCTGCCTGCCAGGGCTGCAAAGCAAGGTCTTGCTTCTATCTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR GCA 90 bp CAACCTGAGGCTGGGGGAACCTGCGGTCTGGAGGAACAATGTGAGTTGGGAGCACAGATGCGCAGGCTCTaGTCCTACCCCCAGGCCTCA +
Preference number: 4 (lower is better)
Translates to: QPEAGGTCGLEEQCELGAQMRRL*SYPQAS
Trigger: TGAGGCCTGGGGGTAGGAGCAGAGCCTGCGCATCTG...TGCTCCCAACTCACATTGTTCCTCCAGACCGCAGGTTCCCCCAGCCTCAGGTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000349015.7
ENST00000673966.1
CDS-3UTR GCA 90 bp CAAAGGCCTGGAGGGCTCCACGCTCTCAACCGTTCAGGGCTGATGCCCCTAAGACATTGCCTCCAAAGCTaGCGCTGCTGGTCCGCTCCA +
Preference number: 4 (lower is better)
Translates to: QRPGGLHALNRSGLMPLRHCLQS*RCWSAP
Trigger: TGGAGCGGACCAGCAGCGGCAGCTTTGGAGGCAATG...TCTTAGGGGCATCAGCCCTGAACGGTTGAGAGCGTGGAGCCCTCCAGGCCTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR CCA 90 bp ATTGGGGAGGGTGGGGTGAGTGAGGACACCTGGCATGTTCTGCGGCCTCTTGGCGCCGACTCCCCCGAATaGCACGGACAGCAGAGATAT +
Preference number: 4 (lower is better)
Translates to: IGEGGVSEDTWHVLRPLGADSPE*HGQQRY
Trigger: ATATCTCTGCTGTCCGTGCCATTCGGGGGAGTCGGC...GCCAAGAGGCCGCAGAACATGCCAGGTGTCCTCACTCACCCCACCCTCCCCAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR CCA 90 bp CAGCAACCTGAGGCTGGGGGAACCTGCGGTCTGGAGGAACAATGTGAGTTGGGACTCTGTGTGACCCGTTaGAGGCGGGTGGGACGCTCA +
Preference number: 4 (lower is better)
Translates to: QQPEAGGTCGLEEQCELGLCVTR*RRVGRS
Trigger: TGAGCGTCCCACCCGCCTCCAACGGGTCACACAGAG...TCCCAACTCACATTGTTCCTCCAGACCGCAGGTTCCCCCAGCCTCAGGTTGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000531248.1
ENST00000673966.1
CDS-3UTR CCA 90 bp CAACCTGAGGCTGGGGGAACCTGCGGTCTGGAGGAACAATGTGAGTTGGGAGCACCCTGTGACTGGGTCTaGCCAACCCTGACCGAGAGG +
Preference number: 4 (lower is better)
Translates to: QPEAGGTCGLEEQCELGAPCDWV*PTLTER
Trigger: CCTCTCGGTCAGGGTTGGCCAGACCCAGTCACAGGG...TGCTCCCAACTCACATTGTTCCTCCAGACCGCAGGTTCCCCCAGCCTCAGGTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR CCA 90 bp CAAAGGCCTGGAGGGCTCCACGCTCTCAACCGTTCAGGGCTGATGCCCCTAAGAGGGAGAGCAAAGGCCTaGAGGGCTCCACGCTCTCAA +
Preference number: 4 (lower is better)
Translates to: QRPGGLHALNRSGLMPLRGRAKA*RAPRSQ
Trigger: TTGAGAGCGTGGAGCCCTCCAGGCCTTTGCTCTCCC...TCTTAGGGGCATCAGCCCTGAACGGTTGAGAGCGTGGAGCCCTCCAGGCCTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR TCA 90 bp TGCCCCTGTGACTGGGTCTGGCCAACCCTGACCGAGAGGGCAAAGGGCTGGAATAGGCCTGCAGGTTCTTaGGAGCGTAGTCAACCTCGT +
Preference number: 4 (lower is better)
Translates to: CPCDWVWPTLTERAKGWNRPAGS*ERSQPR
Trigger: ACGAGGTTGACTACGCTCTCAAGAACCTGCAGGCCT...ATTCCAGCCCTTTGCCCTCTCGGTCAGGGTTGGCCAGACCCAGTCACAGGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR TCA 90 bp CAACCTGAGGCTGGGGGAACCTGCGGTCTGGAGGAACAATGTGAGTTGGGAGCAGCCCTGGCTGATTTCTaGCGGCTTCAGCACCACGCA +
Preference number: 4 (lower is better)
Translates to: QPEAGGTCGLEEQCELGAALADF*RLQHHA
Trigger: TGCGTGGTGCTGAAGCCGTCAGAAATCAGCCAGGGC...TGCTCCCAACTCACATTGTTCCTCCAGACCGCAGGTTCCCCCAGCCTCAGGTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR TCA 90 bp CAGCAACCTGAGGCTGGGGGAACCTGCGGTCTGGAGGAACAATGTGAGTTGGGATCAGGTTTCTCTGTGTaGCCCGTTGGAGGCGGGTGG +
Preference number: 4 (lower is better)
Translates to: QQPEAGGTCGLEEQCELGSGFSV*PVGGGW
Trigger: CCACCCGCCTCCAACGGGTCACACAGAGAAACCTGA...TCCCAACTCACATTGTTCCTCCAGACCGCAGGTTCCCCCAGCCTCAGGTTGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000531248.1
ENST00000673966.1
CDS-3UTR TCA 90 bp CAACCTGAGGCTGGGGGAACCTGCGGTCTGGAGGAACAATGTGAGTTGGGAGCATCAGGTTTCTCTGTGTaGCCCGTTGGAGGCGGGTGG +
Preference number: 4 (lower is better)
Translates to: QPEAGGTCGLEEQCELGASGFSV*PVGGGW
Trigger: CCACCCGCCTCCAACGGGTCACACAGAGAAACCTGA...TGCTCCCAACTCACATTGTTCCTCCAGACCGCAGGTTCCCCCAGCCTCAGGTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000531248.1
ENST00000673966.1
CDS-3UTR TCA 90 bp AGGCTGGGGGAACCTGCGGTCTGGAGGAACAATGTGAGTTGGGAGCATAAGCCCGGAGGGTGGGGTGAGTaGGGACACCTGGCATGTTCT +
Preference number: 4 (lower is better)
Translates to: RLGEPAVWRNNVSWEHKPGGWGE*GHLACS
Trigger: AGAACATGCCAGGTGTCCTCACTCACCCCACCCTCC...GGGCTTATGCTCCCAACTCACATTGTTCCTCCAGACCGCAGGTTCCCCCAGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR TCA 90 bp CTGGGCTATGAGTGCTTGGAAGGATCCCAGGCATACACAGAGGGCCACAGCCAAGACCAGTGTGGGATGTaGGAGGATCCCTGGGGGAGG +
Preference number: 4 (lower is better)
Translates to: LGYECLEGSQAYTEGHSQDQCGM*EDPWGR
Trigger: CCTCCCCCAGGGATCCTCTCACATCCCACACTGGTC...TTGGCTGTGGCCCTCTGTGTATGCCTGGGATCCTTCCAAGCACTCATAGCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR GCA 90 bp CAGCAACCTGAGGCTGGGGGAACCTGCGGTCTGGAGGAACAATGTGAGTTGGGACCCTGCTCTGCTGACTaGGATCCTCCCAGGAGACTG +
Preference number: 4 (lower is better)
Translates to: QQPEAGGTCGLEEQCELGPCSAD*DPPRRL
Trigger: CAGTCTCCTGGGAGGATCGCAGTCAGCAGAGCAGGG...TCCCAACTCACATTGTTCCTCCAGACCGCAGGTTCCCCCAGCCTCAGGTTGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349015.7
ENST00000673966.1
CDS-3UTR GCA 90 bp CCCCCAGATAGAAGCAAGACCTTGCTTTGCAGCCCTGGCAGGCAGGATGCAGTCCCCTGCTCTGCTGACTaGGATCCTCCCAGGAGACTG +
Preference number: 4 (lower is better)
Translates to: PPDRSKTLLCSPGRQDAVPCSAD*DPPRRL
Trigger: CAGTCTCCTGGGAGGATCGCAGTCAGCAGAGCAGGG...GACTGCATCCTGCCTGCCAGGGCTGCAAAGCAAGGTCTTGCTTCTATCTGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349015.7
ENST00000673966.1
CDS-3UTR GCA 90 bp CAACCTGAGGCTGGGGGAACCTGCGGTCTGGAGGAACAATGTGAGTTGGGAGCACATGCTGCCTCCAGATaGGCAGGCTCTGCTCCTACC +
Preference number: 4 (lower is better)
Translates to: QPEAGGTCGLEEQCELGAHAASR*AGSAPT
Trigger: GGTAGGAGCAGAGCCTGCGCATCTGGAGGCAGCATG...TGCTCCCAACTCACATTGTTCCTCCAGACCGCAGGTTCCCCCAGCCTCAGGTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349015.7
ENST00000673966.1
CDS-3UTR GCA 90 bp CAAAGGCCTGGAGGGCTCCACGCTCTCAACCGTTCAGGGCTGATGCCCCTAAGATCGAAAGCTGGCTTATaGAGGTCCTGGGCCAGCACG +
Preference number: 4 (lower is better)
Translates to: QRPGGLHALNRSGLMPLRSKAGL*RSWAST
Trigger: CGTGCTGGCCCAGGACCTGCATAAGCCAGCTTTCGA...TCTTAGGGGCATCAGCCCTGAACGGTTGAGAGCGTGGAGCCCTCCAGGCCTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR GCA 90 bp AGGCTGGGGGAACCTGCGGTCTGGAGGAACAATGTGAGTTGGGAGCATAAGCCCAGCTCTGGGAGCCCATaGCCCAGCGTAACAGCTGCT +
Preference number: 4 (lower is better)
Translates to: RLGEPAVWRNNVSWEHKPSSGSP*PSVTAA
Trigger: AGCAGCTGTTACGCTGGGGCATGGGCTCCCAGAGCT...GGGCTTATGCTCCCAACTCACATTGTTCCTCCAGACCGCAGGTTCCCCCAGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000531248.1
ENST00000673966.1
CDS-3UTR GCA 90 bp CAGCTCCAGCAACCTGAGGCTGGGGGAACCTGCGGTCTGGAGGAACAATGTGAGACACCTGGCATGTTCTaGGGCCTCTTGGCCTCTCTC +
Preference number: 4 (lower is better)
Translates to: QLQQPEAGGTCGLEEQCETPGMF*GLLASL
Trigger: GAGAGAGGCCAAGAGGCCGCAGAACATGCCAGGTGT...CTCACATTGTTCCTCCAGACCGCAGGTTCCCCCAGCCTCAGGTTGCTGGAGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR GCA 90 bp CCCCCAGATAGAAGCAAGACCTTGCTTTGCAGCCCTGGCAGGCAGGATGCAGTCTGGGTGAGTGCAGGGTaGGGTGTGAACCAGAGGGGT +
Preference number: 4 (lower is better)
Translates to: PPDRSKTLLCSPGRQDAVWVSAG*GVNQRG
Trigger: ACCCCTCTGGTTCACACCGCACCCTGCACTCACCCA...GACTGCATCCTGCCTGCCAGGGCTGCAAAGCAAGGTCTTGCTTCTATCTGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR GCA 90 bp CAGCAACCTGAGGCTGGGGGAACCTGCGGTCTGGAGGAACAATGTGAGTTGGGATGGGTGAGTGCAGGGTaGGGTGTGAACCAGAGGGGT +
Preference number: 4 (lower is better)
Translates to: QQPEAGGTCGLEEQCELGWVSAG*GVNQRG
Trigger: ACCCCTCTGGTTCACACCGCACCCTGCACTCACCCA...TCCCAACTCACATTGTTCCTCCAGACCGCAGGTTCCCCCAGCCTCAGGTTGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR CCA 90 bp ATCTGGGCTATGAGTGCTTGGAAGGATCCCAGGCATACACAGAGGGCCACAGCCGGCTTATGCAGGTCCTaGGCCAGCACGTCGCGCAGA +
Preference number: 4 (lower is better)
Translates to: IWAMSAWKDPRHTQRATAGLCRS*ASTSRR
Trigger: TCTGCGCGACGTGCTGGCCCAGGACCTGCATAAGCC...GGCTGTGGCCCTCTGTGTATGCCTGGGATCCTTCCAAGCACTCATAGCCCAGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR CCA 90 bp TGCCCCTGTGACTGGGTCTGGCCAACCCTGACCGAGAGGGCAAAGGGCTGGAATCAGGTTCGTGGACCGTaGTTCATCCTTCATCCAGGC +
Preference number: 4 (lower is better)
Translates to: CPCDWVWPTLTERAKGWNQVRGP*FILHPG
Trigger: GCCTGGATGAAGGATGAACCACGGTCCACGAACCTG...ATTCCAGCCCTTTGCCCTCTCGGTCAGGGTTGGCCAGACCCAGTCACAGGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR CCA 90 bp CAACCTGAGGCTGGGGGAACCTGCGGTCTGGAGGAACAATGTGAGTTGGGAGCACAAAGCTGCCGCTGCTaGTCCGCTCCAGCATCTGGT +
Preference number: 4 (lower is better)
Translates to: QPEAGGTCGLEEQCELGAQSCRC*SAPASG
Trigger: ACCAGATGCTGGAGCGGACCAGCAGCGGCAGCTTTG...TGCTCCCAACTCACATTGTTCCTCCAGACCGCAGGTTCCCCCAGCCTCAGGTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR CCA 90 bp CCTATCTGGGCTATGAGTGCTTGGAAGGATCCCAGGCATACACAGAGGGCCACAAGGAGGGTGCAGCTCTaGGAGCCCATGCCCCAGCGT +
Preference number: 4 (lower is better)
Translates to: PIWAMSAWKDPRHTQRATRRVQL*EPMPQR
Trigger: ACGCTGGGGCATGGGCTCCCAGAGCTGCACCCTCCT...TGTGGCCCTCTGTGTATGCCTGGGATCCTTCCAAGCACTCATAGCCCAGATAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR CCA 90 bp CAACCTGAGGCTGGGGGAACCTGCGGTCTGGAGGAACAATGTGAGTTGGGAGCATGTTCTGCGGCCTCTTaGCCTCTCTCGAGCAGCGTC +
Preference number: 4 (lower is better)
Translates to: QPEAGGTCGLEEQCELGACSAAS*PLSSSV
Trigger: GACGCTGCTCGAGAGAGGCCAAGAGGCCGCAGAACA...TGCTCCCAACTCACATTGTTCCTCCAGACCGCAGGTTCCCCCAGCCTCAGGTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR CCA 90 bp TGCCCCTGTGACTGGGTCTGGCCAACCCTGACCGAGAGGGCAAAGGGCTGGAATGTGAGTGAGGACACCTaGCATGTTCTGCGGCCTCTT +
Preference number: 4 (lower is better)
Translates to: CPCDWVWPTLTERAKGWNVSEDT*HVLRPL
Trigger: AAGAGGCCGCAGAACATGCCAGGTGTCCTCACTCAC...ATTCCAGCCCTTTGCCCTCTCGGTCAGGGTTGGCCAGACCCAGTCACAGGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR CCA 90 bp TGCCCCTGTGACTGGGTCTGGCCAACCCTGACCGAGAGGGCAAAGGGCTGGAATGCCCACGCCTGGCAATaGGGTAATCAATGGGGTGAT +
Preference number: 4 (lower is better)
Translates to: CPCDWVWPTLTERAKGWNAHAWQ*GNQWGD
Trigger: ATCACCCCATTGATTACCCCATTGCCAGGCGTGGGC...ATTCCAGCCCTTTGCCCTCTCGGTCAGGGTTGGCCAGACCCAGTCACAGGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673966.1
CDS-3UTR TCA 90 bp TGCCCCTGTGACTGGGTCTGGCCAACCCTGACCGAGAGGGCAAAGGGCTGGAATAGGGTTCCTTCCAGATaGAGACCGAGTCCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: CPCDWVWPTLTERAKGWNRVPSR*RPSPAS
Trigger: TGAAGCTGGACTCGGTCTTCATCTGGAAGGAACCCT...ATTCCAGCCCTTTGCCCTCTCGGTCAGGGTTGGCCAGACCCAGTCACAGGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR TCA 90 bp TGCCCCTGTGACTGGGTCTGGCCAACCCTGACCGAGAGGGCAAAGGGCTGGAATCACGAGGGCTCCCTGTaGAGAAGATGTAGTCCAACT +
Preference number: 4 (lower is better)
Translates to: CPCDWVWPTLTERAKGWNHEGSL*RRCSPT
Trigger: AGTTGGACTACATCTTCTTCACAGGGAGCCCTCGTG...ATTCCAGCCCTTTGCCCTCTCGGTCAGGGTTGGCCAGACCCAGTCACAGGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR TCA 90 bp CAAAGGCCTGGAGGGCTCCACGCTCTCAACCGTTCAGGGCTGATGCCCCTAAGACTGTATTTTCCAGGGTaGCACTGCCCCTGTGACTGG +
Preference number: 4 (lower is better)
Translates to: QRPGGLHALNRSGLMPLRLYFPG*HCPCDW
Trigger: CCAGTCACAGGGGCAGTGTCACCCTGGAAAATACAG...TCTTAGGGGCATCAGCCCTGAACGGTTGAGAGCGTGGAGCCCTCCAGGCCTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR TCA 90 bp ATCTGGGCTATGAGTGCTTGGAAGGATCCCAGGCATACACAGAGGGCCACAGCCACGGGCATGTGTGTGTaGGGGCTTCTATGTGGCCCC +
Preference number: 4 (lower is better)
Translates to: IWAMSAWKDPRHTQRATATGMCV*GLLCGP
Trigger: GGGGCCACATAGAAGCCCTCACACACACATGCCCGT...GGCTGTGGCCCTCTGTGTATGCCTGGGATCCTTCCAAGCACTCATAGCCCAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR GCA 90 bp CCTATCTGGGCTATGAGTGCTTGGAAGGATCCCAGGCATACACAGAGGGCCACACAGATGCGCAGGCTCTaGTCCTACCCCCAGGCCTCA +
Preference number: 4 (lower is better)
Translates to: PIWAMSAWKDPRHTQRATQMRRL*SYPQAS
Trigger: TGAGGCCTGGGGGTAGGAGCAGAGCCTGCGCATCTG...TGTGGCCCTCTGTGTATGCCTGGGATCCTTCCAAGCACTCATAGCCCAGATAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349015.7
ENST00000673966.1
CDS-3UTR GCA 90 bp CCCCCAGATAGAAGCAAGACCTTGCTTTGCAGCCCTGGCAGGCAGGATGCAGTCCCCTGGGTCCTTCGCTaGACCTCCACTCCCTTTCTT +
Preference number: 4 (lower is better)
Translates to: PPDRSKTLLCSPGRQDAVPWVLR*TSTPFL
Trigger: AAGAAAGGGAGTGGAGGTGCAGCGAAGGACCCAGGG...GACTGCATCCTGCCTGCCAGGGCTGCAAAGCAAGGTCTTGCTTCTATCTGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349015.7
ENST00000673966.1
CDS-3UTR GCA 90 bp CCCCCAGATAGAAGCAAGACCTTGCTTTGCAGCCCTGGCAGGCAGGATGCAGTCCCCTGGCAGGCAGGATaGAGTCATGTGACAGCTCCA +
Preference number: 4 (lower is better)
Translates to: PPDRSKTLLCSPGRQDAVPWQAG*SHVTAP
Trigger: TGGAGCTGTCACATGACTGCATCCTGCCTGCCAGGG...GACTGCATCCTGCCTGCCAGGGCTGCAAAGCAAGGTCTTGCTTCTATCTGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR GCA 90 bp ATTGGGGAGGGTGGGGTGAGTGAGGACACCTGGCATGTTCTGCGGCCTCTTGGCAGAAGTCAAGGGACTTaGCCCCAGGTCCCACTAACA +
Preference number: 4 (lower is better)
Translates to: IGEGGVSEDTWHVLRPLGRSQGT*PQVPLT
Trigger: TGTTAGTGGGACCTGGGGGCAAGTCCCTTGACTTCT...GCCAAGAGGCCGCAGAACATGCCAGGTGTCCTCACTCACCCCACCCTCCCCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR GCA 90 bp CCTGTGTCTGGTCTACATGCAGGCGTGTCTTGTGATAAATCCTGTTACGGGCATCCCCAGCGTGGGCTCTaGCCCTGGGTCCTTCGCTGC +
Preference number: 4 (lower is better)
Translates to: PVSGLHAGVSCDKSCYGHPQRGL*PWVLRC
Trigger: GCAGCGAAGGACCCAGGGGCAGAGCCCACGCTGGGG...ATGCCCGTAACAGGATTTATCACAAGACACGCCTGCATGTAGACCAGACACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673966.1
CDS-3UTR CCA 90 bp CAACCTGAGGCTGGGGGAACCTGCGGTCTGGAGGAACAATGTGAGTTGGGAGCATCCCGTGCCCACGCCTaGCAATGGGGTAATCAATGG +
Preference number: 4 (lower is better)
Translates to: QPEAGGTCGLEEQCELGASRAHA*QWGNQW
Trigger: CCATTGATTACCCCATTGCCAGGCGTGGGCACGGGA...TGCTCCCAACTCACATTGTTCCTCCAGACCGCAGGTTCCCCCAGCCTCAGGTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349015.7
ENST00000673966.1
CDS-3UTR CCA 90 bp CCCCCAGATAGAAGCAAGACCTTGCTTTGCAGCCCTGGCAGGCAGGATGCAGTCTCCCGTGCCCACGCCTaGCAATGGGGTAATCAATGG +
Preference number: 4 (lower is better)
Translates to: PPDRSKTLLCSPGRQDAVSRAHA*QWGNQW
Trigger: CCATTGATTACCCCATTGCCAGGCGTGGGCACGGGA...GACTGCATCCTGCCTGCCAGGGCTGCAAAGCAAGGTCTTGCTTCTATCTGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349015.7
ENST00000673966.1
CDS-3UTR CCA 90 bp CTGGGCTATGAGTGCTTGGAAGGATCCCAGGCATACACAGAGGGCCACAGCCAAACGGCAAAGCAGCTCTaGTCCAGGTACTGGGGCAGC +
Preference number: 4 (lower is better)
Translates to: LGYECLEGSQAYTEGHSQTAKQL*SRYWGS
Trigger: GCTGCCCCAGTACCTGGACCAGAGCTGCTTTGCCGT...TTGGCTGTGGCCCTCTGTGTATGCCTGGGATCCTTCCAAGCACTCATAGCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR CCA 90 bp CAAAGGCCTGGAGGGCTCCACGCTCTCAACCGTTCAGGGCTGATGCCCCTAAGACTTGCTTTGCAGCCCTaGCAGGCAGGATGCAGTCAT +
Preference number: 4 (lower is better)
Translates to: QRPGGLHALNRSGLMPLRLALQP*QAGCSH
Trigger: ATGACTGCATCCTGCCTGCCAGGGCTGCAAAGCAAG...TCTTAGGGGCATCAGCCCTGAACGGTTGAGAGCGTGGAGCCCTCCAGGCCTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR CCA 90 bp CCTATCTGGGCTATGAGTGCTTGGAAGGATCCCAGGCATACACAGAGGGCCACACCCTGTGACTGGGTCTaGCCAACCCTGACCGAGAGG +
Preference number: 4 (lower is better)
Translates to: PIWAMSAWKDPRHTQRATPCDWV*PTLTER
Trigger: CCTCTCGGTCAGGGTTGGCCAGACCCAGTCACAGGG...TGTGGCCCTCTGTGTATGCCTGGGATCCTTCCAAGCACTCATAGCCCAGATAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR CCA 90 bp AGGCTGGGGGAACCTGCGGTCTGGAGGAACAATGTGAGTTGGGAGCATAAGCCCCTGGTGCAGTTGGGATaGGGCAGAGATGGAAGTGCG +
Preference number: 4 (lower is better)
Translates to: RLGEPAVWRNNVSWEHKPLVQLG*GRDGSA
Trigger: CGCACTTCCATCTCTGCCCCATCCCAACTGCACCAG...GGGCTTATGCTCCCAACTCACATTGTTCCTCCAGACCGCAGGTTCCCCCAGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR CCA 90 bp CAGCTCCAGCAACCTGAGGCTGGGGGAACCTGCGGTCTGGAGGAACAATGTGAGGTGCAGAGACCAGTGTaGGATGTGAGAGGATCCCTG +
Preference number: 4 (lower is better)
Translates to: QLQQPEAGGTCGLEEQCEVQRPV*DVRGSL
Trigger: CAGGGATCCTCTCACATCCCACACTGGTCTCTGCAC...CTCACATTGTTCCTCCAGACCGCAGGTTCCCCCAGCCTCAGGTTGCTGGAGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR CCA 90 bp ATCTGGGCTATGAGTGCTTGGAAGGATCCCAGGCATACACAGAGGGCCACAGCCTGGATGGAGCTGCTGTaGGTGAGTGCAGGGTGCGGT +
Preference number: 4 (lower is better)
Translates to: IWAMSAWKDPRHTQRATAWMELL*VSAGCG
Trigger: ACCGCACCCTGCACTCACCCACAGCAGCTCCATCCA...GGCTGTGGCCCTCTGTGTATGCCTGGGATCCTTCCAAGCACTCATAGCCCAGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR CCA 90 bp CAACCTGAGGCTGGGGGAACCTGCGGTCTGGAGGAACAATGTGAGTTGGGAGCACCCCAGTTTTCCCAGTaGATGGAGCTGCTGTGGGTG +
Preference number: 4 (lower is better)
Translates to: QPEAGGTCGLEEQCELGAPQFSQ*MELLWV
Trigger: CACCCACAGCAGCTCCATCCACTGGGAAAACTGGGG...TGCTCCCAACTCACATTGTTCCTCCAGACCGCAGGTTCCCCCAGCCTCAGGTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR CCA 90 bp CAGCAACCTGAGGCTGGGGGAACCTGCGGTCTGGAGGAACAATGTGAGTTGGGACCCCAGTTTTCCCAGTaGATGGAGCTGCTGTGGGTG +
Preference number: 4 (lower is better)
Translates to: QQPEAGGTCGLEEQCELGPQFSQ*MELLWV
Trigger: CACCCACAGCAGCTCCATCCACTGGGAAAACTGGGG...TCCCAACTCACATTGTTCCTCCAGACCGCAGGTTCCCCCAGCCTCAGGTTGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR TCA 90 bp CAACCTGAGGCTGGGGGAACCTGCGGTCTGGAGGAACAATGTGAGTTGGGAGCAAGGCCTGCAGGTTCTTaGGAGCGTAGTCAACCTCGT +
Preference number: 4 (lower is better)
Translates to: QPEAGGTCGLEEQCELGARPAGS*ERSQPR
Trigger: ACGAGGTTGACTACGCTCTCAAGAACCTGCAGGCCT...TGCTCCCAACTCACATTGTTCCTCCAGACCGCAGGTTCCCCCAGCCTCAGGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR TCA 90 bp CAGCAACCTGAGGCTGGGGGAACCTGCGGTCTGGAGGAACAATGTGAGTTGGGAAGGCCTGCAGGTTCTTaGGAGCGTAGTCAACCTCGT +
Preference number: 4 (lower is better)
Translates to: QQPEAGGTCGLEEQCELGRPAGS*ERSQPR
Trigger: ACGAGGTTGACTACGCTCTCAAGAACCTGCAGGCCT...TCCCAACTCACATTGTTCCTCCAGACCGCAGGTTCCCCCAGCCTCAGGTTGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR TCA 90 bp AGGCTGGGGGAACCTGCGGTCTGGAGGAACAATGTGAGTTGGGAGCATAAGCCCCAGGATGCAGTCATGTaGCAGCTCCAGCAACCTGAG +
Preference number: 4 (lower is better)
Translates to: RLGEPAVWRNNVSWEHKPQDAVM*QLQQPE
Trigger: CTCAGGTTGCTGGAGCTGTCACATGACTGCATCCTG...GGGCTTATGCTCCCAACTCACATTGTTCCTCCAGACCGCAGGTTCCCCCAGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000531248.1
ENST00000673966.1
CDS-3UTR TCA 90 bp CAGCAACCTGAGGCTGGGGGAACCTGCGGTCTGGAGGAACAATGTGAGTTGGGACAGGATGCAGTCATGTaGCAGCTCCAGCAACCTGAG +
Preference number: 4 (lower is better)
Translates to: QQPEAGGTCGLEEQCELGQDAVM*QLQQPE
Trigger: CTCAGGTTGCTGGAGCTGTCACATGACTGCATCCTG...TCCCAACTCACATTGTTCCTCCAGACCGCAGGTTCCCCCAGCCTCAGGTTGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000531248.1
ENST00000673966.1
CDS-3UTR GCA 90 bp GGTTTTCTGGTGGAGACGGCCGTGGTAGGTAAGCATCTGCAGCTCATCTGGAATCCAAACCAACTCCCGTaGCCACGCCTGGCAATGGGG +
Preference number: 4 (lower is better)
Translates to: GFLVETAVVGKHLQLIWNPNQLP*PRLAMG
Trigger: CCCCATTGCCAGGCGTGGGCACGGGAGTTGGTTTGG...ATTCCAGATGAGCTGCAGATGCTTACCTACCACGGCCGTCTCCACCAGAAAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349015.7
ENST00000673966.1
CDS-3UTR GCA 90 bp AGGCTGGGGGAACCTGCGGTCTGGAGGAACAATGTGAGTTGGGAGCATAAGCCCCTTTCTTGGACATGCTaGCTCCAGATGCGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: RLGEPAVWRNNVSWEHKPLSWTC*LQMRRL
Trigger: GAGCCTGCGCATCTGGAGGCAGCATGTCCAAGAAAG...GGGCTTATGCTCCCAACTCACATTGTTCCTCCAGACCGCAGGTTCCCCCAGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349015.7
ENST00000673966.1
CDS-3UTR GCA 90 bp CAACCTGAGGCTGGGGGAACCTGCGGTCTGGAGGAACAATGTGAGTTGGGAGCACTTTCTTGGACATGCTaGCTCCAGATGCGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: QPEAGGTCGLEEQCELGALSWTC*LQMRRL
Trigger: GAGCCTGCGCATCTGGAGGCAGCATGTCCAAGAAAG...TGCTCCCAACTCACATTGTTCCTCCAGACCGCAGGTTCCCCCAGCCTCAGGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349015.7
ENST00000673966.1
CDS-3UTR GCA 90 bp CAACCTGAGGCTGGGGGAACCTGCGGTCTGGAGGAACAATGTGAGTTGGGAGCATCCCTTTCTTGGACATaGTGCCTCCAGATGCGCAGG +
Preference number: 4 (lower is better)
Translates to: QPEAGGTCGLEEQCELGASLSWT*CLQMRR
Trigger: CCTGCGCATCTGGAGGCAGCATGTCCAAGAAAGGGA...TGCTCCCAACTCACATTGTTCCTCCAGACCGCAGGTTCCCCCAGCCTCAGGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349015.7
ENST00000673966.1
CDS-3UTR GCA 90 bp CCCCCAGATAGAAGCAAGACCTTGCTTTGCAGCCCTGGCAGGCAGGATGCAGTCTCCCTTTCTTGGACATaGTGCCTCCAGATGCGCAGG +
Preference number: 4 (lower is better)
Translates to: PPDRSKTLLCSPGRQDAVSLSWT*CLQMRR
Trigger: CCTGCGCATCTGGAGGCAGCATGTCCAAGAAAGGGA...GACTGCATCCTGCCTGCCAGGGCTGCAAAGCAAGGTCTTGCTTCTATCTGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349015.7
ENST00000673966.1
CDS-3UTR GCA 90 bp GGAGAGCAAAGGCCTGGAGGGCTCCACGCTCTCAACCGTTCAGGGCTGATGCCCGAGCTCAGATATGTCTaGCTCGAAAGCTGGCTTATG +
Preference number: 4 (lower is better)
Translates to: GEQRPGGLHALNRSGLMPELRYV*LESWLM
Trigger: CATAAGCCAGCTTTCGAGGCAGACATATCTGAGCTC...GGGCATCAGCCCTGAACGGTTGAGAGCGTGGAGCCCTCCAGGCCTTTGCTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR GCA 90 bp CAACCTGAGGCTGGGGGAACCTGCGGTCTGGAGGAACAATGTGAGTTGGGAGCAAGCAAGACCTTGCTTTaGAGCCCTGGCAGGCAGGAT +
Preference number: 4 (lower is better)
Translates to: QPEAGGTCGLEEQCELGASKTLL*SPGRQD
Trigger: ATCCTGCCTGCCAGGGCTGCAAAGCAAGGTCTTGCT...TGCTCCCAACTCACATTGTTCCTCCAGACCGCAGGTTCCCCCAGCCTCAGGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR GCA 90 bp AGGCTGGGGGAACCTGCGGTCTGGAGGAACAATGTGAGTTGGGAGCATAAGCCCAGCAAGACCTTGCTTTaGAGCCCTGGCAGGCAGGAT +
Preference number: 4 (lower is better)
Translates to: RLGEPAVWRNNVSWEHKPSKTLL*SPGRQD
Trigger: ATCCTGCCTGCCAGGGCTGCAAAGCAAGGTCTTGCT...GGGCTTATGCTCCCAACTCACATTGTTCCTCCAGACCGCAGGTTCCCCCAGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR GCA 90 bp CAAAGGCCTGGAGGGCTCCACGCTCTCAACCGTTCAGGGCTGATGCCCCTAAGAAGAAGTCAAGGGACTTaGCCCCAGGTCCCACTAACA +
Preference number: 4 (lower is better)
Translates to: QRPGGLHALNRSGLMPLRRSQGT*PQVPLT
Trigger: TGTTAGTGGGACCTGGGGGCAAGTCCCTTGACTTCT...TCTTAGGGGCATCAGCCCTGAACGGTTGAGAGCGTGGAGCCCTCCAGGCCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR CCA 90 bp CCCCCAGATAGAAGCAAGACCTTGCTTTGCAGCCCTGGCAGGCAGGATGCAGTCATCCTCCCAGGAGACTaGCAGCTCCCAAACCAACTC +
Preference number: 4 (lower is better)
Translates to: PPDRSKTLLCSPGRQDAVILPGD*QLPNQL
Trigger: GAGTTGGTTTGGGAGCTGCCAGTCTCCTGGGAGGAT...GACTGCATCCTGCCTGCCAGGGCTGCAAAGCAAGGTCTTGCTTCTATCTGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349015.7
ENST00000673966.1
CDS-3UTR CCA 90 bp CAGCAACCTGAGGCTGGGGGAACCTGCGGTCTGGAGGAACAATGTGAGTTGGGACAGGTTCGTGGACCGTaGTTCATCCTTCATCCAGGC +
Preference number: 4 (lower is better)
Translates to: QQPEAGGTCGLEEQCELGQVRGP*FILHPG
Trigger: GCCTGGATGAAGGATGAACCACGGTCCACGAACCTG...TCCCAACTCACATTGTTCCTCCAGACCGCAGGTTCCCCCAGCCTCAGGTTGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR CCA 90 bp CAAAGGCCTGGAGGGCTCCACGCTCTCAACCGTTCAGGGCTGATGCCCCTAAGAATCTGGTTCACAACCTaGCTGCTGTTGGAGAAGGCG +
Preference number: 4 (lower is better)
Translates to: QRPGGLHALNRSGLMPLRIWFTT*LLLEKA
Trigger: CGCCTTCTCCAACAGCAGCCAGGTTGTGAACCAGAT...TCTTAGGGGCATCAGCCCTGAACGGTTGAGAGCGTGGAGCCCTCCAGGCCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR CCA 90 bp CCTGTGTCTGGTCTACATGCAGGCGTGTCTTGTGATAAATCCTGTTACGGGCATCCCGTTGGAGGCGGGTaGGACGCTCACAGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: PVSGLHAGVSCDKSCYGHPVGGG*DAHRRV
Trigger: CACCCTCCTGTGAGCGTCCCACCCGCCTCCAACGGG...ATGCCCGTAACAGGATTTATCACAAGACACGCCTGCATGTAGACCAGACACAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR CCA 90 bp AGGCTGGGGGAACCTGCGGTCTGGAGGAACAATGTGAGTTGGGAGCATAAGCCCCTTGCTTTGCAGCCCTaGCAGGCAGGATGCAGTCAT +
Preference number: 4 (lower is better)
Translates to: RLGEPAVWRNNVSWEHKPLALQP*QAGCSH
Trigger: ATGACTGCATCCTGCCTGCCAGGGCTGCAAAGCAAG...GGGCTTATGCTCCCAACTCACATTGTTCCTCCAGACCGCAGGTTCCCCCAGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR CCA 90 bp CAACCTGAGGCTGGGGGAACCTGCGGTCTGGAGGAACAATGTGAGTTGGGAGCACTTGCTTTGCAGCCCTaGCAGGCAGGATGCAGTCAT +
Preference number: 4 (lower is better)
Translates to: QPEAGGTCGLEEQCELGALALQP*QAGCSH
Trigger: ATGACTGCATCCTGCCTGCCAGGGCTGCAAAGCAAG...TGCTCCCAACTCACATTGTTCCTCCAGACCGCAGGTTCCCCCAGCCTCAGGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR CCA 90 bp AGGCTGGGGGAACCTGCGGTCTGGAGGAACAATGTGAGTTGGGAGCATAAGCCCGTGAGTGAGGACACCTaGCATGTTCTGCGGCCTCTT +
Preference number: 4 (lower is better)
Translates to: RLGEPAVWRNNVSWEHKPVSEDT*HVLRPL
Trigger: AAGAGGCCGCAGAACATGCCAGGTGTCCTCACTCAC...GGGCTTATGCTCCCAACTCACATTGTTCCTCCAGACCGCAGGTTCCCCCAGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR CCA 90 bp CCTATCTGGGCTATGAGTGCTTGGAAGGATCCCAGGCATACACAGAGGGCCACAGGGAGAGCAAAGGCCTaGAGGGCTCCACGCTCTCAA +
Preference number: 4 (lower is better)
Translates to: PIWAMSAWKDPRHTQRATGRAKA*RAPRSQ
Trigger: TTGAGAGCGTGGAGCCCTCCAGGCCTTTGCTCTCCC...TGTGGCCCTCTGTGTATGCCTGGGATCCTTCCAAGCACTCATAGCCCAGATAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR CCA 90 bp CCCCCAGATAGAAGCAAGACCTTGCTTTGCAGCCCTGGCAGGCAGGATGCAGTCGTGCAGAGACCAGTGTaGGATGTGAGAGGATCCCTG +
Preference number: 4 (lower is better)
Translates to: PPDRSKTLLCSPGRQDAVVQRPV*DVRGSL
Trigger: CAGGGATCCTCTCACATCCCACACTGGTCTCTGCAC...GACTGCATCCTGCCTGCCAGGGCTGCAAAGCAAGGTCTTGCTTCTATCTGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR CCA 90 bp ATCTGGGCTATGAGTGCTTGGAAGGATCCCAGGCATACACAGAGGGCCACAGCCTGTGAACCAGAGGGGTaGTGCAGAGACCAGTGTGGG +
Preference number: 4 (lower is better)
Translates to: IWAMSAWKDPRHTQRATACEPEG*CRDQCG
Trigger: CCCACACTGGTCTCTGCACCACCCCTCTGGTTCACA...GGCTGTGGCCCTCTGTGTATGCCTGGGATCCTTCCAAGCACTCATAGCCCAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
3UTR CAA 72 bp TCTCTCGAGCAGCGTCCCCCAGATAGAAGCAAGACCTaGCTTTGCAGCCCTGGCAGGCAGGATGCAGTCATG +
Preference number: 4 (lower is better)
Translates to: SLEQRPPDRSKT*LCSPGRQDAVM
Trigger: CATGACTGCATCCTGCCTGCCAGGGCTGCAAAGCAAGGTCTTGCTTCTATCTGGGGGACGCTGCTCGAGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR TCA 90 bp CAGCAACCTGAGGCTGGGGGAACCTGCGGTCTGGAGGAACAATGTGAGTTGGGAAGGGTTCCTTCCAGATaGAGACCGAGTCCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: QQPEAGGTCGLEEQCELGRVPSR*RPSPAS
Trigger: TGAAGCTGGACTCGGTCTTCATCTGGAAGGAACCCT...TCCCAACTCACATTGTTCCTCCAGACCGCAGGTTCCCCCAGCCTCAGGTTGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR TCA 90 bp GGTTTTCTGGTGGAGACGGCCGTGGTAGGTAAGCATCTGCAGCTCATCTGGAATGCCCTGGCTGATTTCTaGCGGCTTCAGCACCACGCA +
Preference number: 4 (lower is better)
Translates to: GFLVETAVVGKHLQLIWNALADF*RLQHHA
Trigger: TGCGTGGTGCTGAAGCCGTCAGAAATCAGCCAGGGC...ATTCCAGATGAGCTGCAGATGCTTACCTACCACGGCCGTCTCCACCAGAAAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR TCA 90 bp CAGCTCCAGCAACCTGAGGCTGGGGGAACCTGCGGTCTGGAGGAACAATGTGAGGCAGAGATATGTAGGTaGAGCCCTCATTGCCTCCAA +
Preference number: 4 (lower is better)
Translates to: QLQQPEAGGTCGLEEQCEAEICR*SPHCLQ
Trigger: TTGGAGGCAATGAGGGCTTCACCTACATATCTCTGC...CTCACATTGTTCCTCCAGACCGCAGGTTCCCCCAGCCTCAGGTTGCTGGAGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR TCA 90 bp AGGCTGGGGGAACCTGCGGTCTGGAGGAACAATGTGAGTTGGGAGCATAAGCCCTCTGGAGGAACAATGTaGGTTGGGAGCATAAGCCCC +
Preference number: 4 (lower is better)
Translates to: RLGEPAVWRNNVSWEHKPSGGTM*VGSISP
Trigger: GGGGCTTATGCTCCCAACTCACATTGTTCCTCCAGA...GGGCTTATGCTCCCAACTCACATTGTTCCTCCAGACCGCAGGTTCCCCCAGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000531248.1
ENST00000673966.1
CDS-3UTR TCA 90 bp CTGGGCTATGAGTGCTTGGAAGGATCCCAGGCATACACAGAGGGCCACAGCCAACAGGATGCAGTCATGTaGCAGCTCCAGCAACCTGAG +
Preference number: 4 (lower is better)
Translates to: LGYECLEGSQAYTEGHSQQDAVM*QLQQPE
Trigger: CTCAGGTTGCTGGAGCTGTCACATGACTGCATCCTG...TTGGCTGTGGCCCTCTGTGTATGCCTGGGATCCTTCCAAGCACTCATAGCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR GCA 90 bp CAACCTGAGGCTGGGGGAACCTGCGGTCTGGAGGAACAATGTGAGTTGGGAGCAATAGAAGCAAGACCTTaGTTTGCAGCCCTGGCAGGC +
Preference number: 4 (lower is better)
Translates to: QPEAGGTCGLEEQCELGAIEARP*FAALAG
Trigger: GCCTGCCAGGGCTGCAAAGCAAGGTCTTGCTTCTAT...TGCTCCCAACTCACATTGTTCCTCCAGACCGCAGGTTCCCCCAGCCTCAGGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR GCA 90 bp GGTTTTCTGGTGGAGACGGCCGTGGTAGGTAAGCATCTGCAGCTCATCTGGAATTGGGTGAGTGCAGGGTaGGGTGTGAACCAGAGGGGT +
Preference number: 4 (lower is better)
Translates to: GFLVETAVVGKHLQLIWNWVSAG*GVNQRG
Trigger: ACCCCTCTGGTTCACACCGCACCCTGCACTCACCCA...ATTCCAGATGAGCTGCAGATGCTTACCTACCACGGCCGTCTCCACCAGAAAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR CCA 90 bp CCCCCAGATAGAAGCAAGACCTTGCTTTGCAGCCCTGGCAGGCAGGATGCAGTCCTCCACTCCCTTTCTTaGACATGCTGCCTCCAGATG +
Preference number: 4 (lower is better)
Translates to: PPDRSKTLLCSPGRQDAVLHSLS*TCCLQM
Trigger: CATCTGGAGGCAGCATGTCCAAGAAAGGGAGTGGAG...GACTGCATCCTGCCTGCCAGGGCTGCAAAGCAAGGTCTTGCTTCTATCTGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349015.7
ENST00000673966.1
CDS-3UTR CCA 90 bp ATCTGGGCTATGAGTGCTTGGAAGGATCCCAGGCATACACAGAGGGCCACAGCCCAGGTTCGTGGACCGTaGTTCATCCTTCATCCAGGC +
Preference number: 4 (lower is better)
Translates to: IWAMSAWKDPRHTQRATAQVRGP*FILHPG
Trigger: GCCTGGATGAAGGATGAACCACGGTCCACGAACCTG...GGCTGTGGCCCTCTGTGTATGCCTGGGATCCTTCCAAGCACTCATAGCCCAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR CCA 90 bp GGTTTTCTGGTGGAGACGGCCGTGGTAGGTAAGCATCTGCAGCTCATCTGGAATACGGCAAAGCAGCTCTaGTCCAGGTACTGGGGCAGC +
Preference number: 4 (lower is better)
Translates to: GFLVETAVVGKHLQLIWNTAKQL*SRYWGS
Trigger: GCTGCCCCAGTACCTGGACCAGAGCTGCTTTGCCGT...ATTCCAGATGAGCTGCAGATGCTTACCTACCACGGCCGTCTCCACCAGAAAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR CCA 90 bp CCTATCTGGGCTATGAGTGCTTGGAAGGATCCCAGGCATACACAGAGGGCCACAGTCCGCTCCAGCATCTaGTTCACAACCTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: PIWAMSAWKDPRHTQRATVRSSI*FTTWLL
Trigger: CAGCAGCCAGGTTGTGAACCAGATGCTGGAGCGGAC...TGTGGCCCTCTGTGTATGCCTGGGATCCTTCCAAGCACTCATAGCCCAGATAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR CCA 90 bp CCTATCTGGGCTATGAGTGCTTGGAAGGATCCCAGGCATACACAGAGGGCCACATGTGAACCAGAGGGGTaGTGCAGAGACCAGTGTGGG +
Preference number: 4 (lower is better)
Translates to: PIWAMSAWKDPRHTQRATCEPEG*CRDQCG
Trigger: CCCACACTGGTCTCTGCACCACCCCTCTGGTTCACA...TGTGGCCCTCTGTGTATGCCTGGGATCCTTCCAAGCACTCATAGCCCAGATAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR CCA 90 bp GGTTTTCTGGTGGAGACGGCCGTGGTAGGTAAGCATCTGCAGCTCATCTGGAATTGGATGGAGCTGCTGTaGGTGAGTGCAGGGTGCGGT +
Preference number: 4 (lower is better)
Translates to: GFLVETAVVGKHLQLIWNWMELL*VSAGCG
Trigger: ACCGCACCCTGCACTCACCCACAGCAGCTCCATCCA...ATTCCAGATGAGCTGCAGATGCTTACCTACCACGGCCGTCTCCACCAGAAAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR CCA 90 bp CCCCCAGATAGAAGCAAGACCTTGCTTTGCAGCCCTGGCAGGCAGGATGCAGTCGGGGTCCATCAGTTATaGTGGAAGGGGAAGCAACCA +
Preference number: 4 (lower is better)
Translates to: PPDRSKTLLCSPGRQDAVGVHQL*WKGKQP
Trigger: TGGTTGCTTCCCCTTCCACCATAACTGATGGACCCC...GACTGCATCCTGCCTGCCAGGGCTGCAAAGCAAGGTCTTGCTTCTATCTGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000530069.6
3UTR CAA 72 bp GGAGGAGCAGAGGATTCCTATCTGGGCTATGAGTGCTaGGAAGGATCCCAGGCATACACAGAGGGCCACAGC +
Preference number: 4 (lower is better)
Translates to: GGAEDSYLGYEC*EGSQAYTEGHS
Trigger: GCTGTGGCCCTCTGTGTATGCCTGGGATCCTTCCAAGCACTCATAGCCCAGATAGGAATCCTCTGCTCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR TCA 90 bp CAACCTGAGGCTGGGGGAACCTGCGGTCTGGAGGAACAATGTGAGTTGGGAGCAGCAGAGATATGTAGGTaGAGCCCTCATTGCCTCCAA +
Preference number: 4 (lower is better)
Translates to: QPEAGGTCGLEEQCELGAAEICR*SPHCLQ
Trigger: TTGGAGGCAATGAGGGCTTCACCTACATATCTCTGC...TGCTCCCAACTCACATTGTTCCTCCAGACCGCAGGTTCCCCCAGCCTCAGGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR TCA 90 bp CCTGTGTCTGGTCTACATGCAGGCGTGTCTTGTGATAAATCCTGTTACGGGCATGACCAGTGTGGGATGTaGGAGGATCCCTGGGGGAGG +
Preference number: 4 (lower is better)
Translates to: PVSGLHAGVSCDKSCYGHDQCGM*EDPWGR
Trigger: CCTCCCCCAGGGATCCTCTCACATCCCACACTGGTC...ATGCCCGTAACAGGATTTATCACAAGACACGCCTGCATGTAGACCAGACACAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR GCA 90 bp ATCTGGGCTATGAGTGCTTGGAAGGATCCCAGGCATACACAGAGGGCCACAGCCATAGAAGCAAGACCTTaGTTTGCAGCCCTGGCAGGC +
Preference number: 4 (lower is better)
Translates to: IWAMSAWKDPRHTQRATAIEARP*FAALAG
Trigger: GCCTGCCAGGGCTGCAAAGCAAGGTCTTGCTTCTAT...GGCTGTGGCCCTCTGTGTATGCCTGGGATCCTTCCAAGCACTCATAGCCCAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR GCA 90 bp CAGCAACCTGAGGCTGGGGGAACCTGCGGTCTGGAGGAACAATGTGAGTTGGGATATCTGGGCTATGAGTaGTTGGAAGGATCCCAGGCA +
Preference number: 4 (lower is better)
Translates to: QQPEAGGTCGLEEQCELGYLGYE*LEGSQA
Trigger: TGCCTGGGATCCTTCCAAGCACTCATAGCCCAGATA...TCCCAACTCACATTGTTCCTCCAGACCGCAGGTTCCCCCAGCCTCAGGTTGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR CCA 90 bp GGTTTTCTGGTGGAGACGGCCGTGGTAGGTAAGCATCTGCAGCTCATCTGGAATGCCGACTCCCCCGAATaGCACGGACAGCAGAGATAT +
Preference number: 4 (lower is better)
Translates to: GFLVETAVVGKHLQLIWNADSPE*HGQQRY
Trigger: ATATCTCTGCTGTCCGTGCCATTCGGGGGAGTCGGC...ATTCCAGATGAGCTGCAGATGCTTACCTACCACGGCCGTCTCCACCAGAAAACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR CCA 90 bp CCTGTGTCTGGTCTACATGCAGGCGTGTCTTGTGATAAATCCTGTTACGGGCATTGGGGGAGGCAGTGCTaGTGCAGTTGGGATGGGGCA +
Preference number: 4 (lower is better)
Translates to: PVSGLHAGVSCDKSCYGHWGRQC*CSWDGA
Trigger: TGCCCCATCCCAACTGCACCAGCACTGCCTCCCCCA...ATGCCCGTAACAGGATTTATCACAAGACACGCCTGCATGTAGACCAGACACAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR TCA 90 bp CCTGTGTCTGGTCTACATGCAGGCGTGTCTTGTGATAAATCCTGTTACGGGCATTCAGGTTTCTCTGTGTaGCCCGTTGGAGGCGGGTGG +
Preference number: 4 (lower is better)
Translates to: PVSGLHAGVSCDKSCYGHSGFSV*PVGGGW
Trigger: CCACCCGCCTCCAACGGGTCACACAGAGAAACCTGA...ATGCCCGTAACAGGATTTATCACAAGACACGCCTGCATGTAGACCAGACACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR TCA 90 bp CCTGTGTCTGGTCTACATGCAGGCGTGTCTTGTGATAAATCCTGTTACGGGCATACGGGCATGTGTGTGTaGGGGCTTCTATGTGGCCCC +
Preference number: 4 (lower is better)
Translates to: PVSGLHAGVSCDKSCYGHTGMCV*GLLCGP
Trigger: GGGGCCACATAGAAGCCCTCACACACACATGCCCGT...ATGCCCGTAACAGGATTTATCACAAGACACGCCTGCATGTAGACCAGACACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR GCA 90 bp TGTCTGGTCTACATGCAGGCGTGTCTTGTGATAAATCCTGTTACGGGCATGTGTCCAAACCAACTCCCGTaGCCACGCCTGGCAATGGGG +
Preference number: 4 (lower is better)
Translates to: CLVYMQACLVINPVTGMCPNQLP*PRLAMG
Trigger: CCCCATTGCCAGGCGTGGGCACGGGAGTTGGTTTGG...ACACATGCCCGTAACAGGATTTATCACAAGACACGCCTGCATGTAGACCAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349015.7
ENST00000673966.1
CDS-3UTR GCA 90 bp CAACCTGAGGCTGGGGGAACCTGCGGTCTGGAGGAACAATGTGAGTTGGGAGCAGAGCTCAGATATGTCTaGCTCGAAAGCTGGCTTATG +
Preference number: 4 (lower is better)
Translates to: QPEAGGTCGLEEQCELGAELRYV*LESWLM
Trigger: CATAAGCCAGCTTTCGAGGCAGACATATCTGAGCTC...TGCTCCCAACTCACATTGTTCCTCCAGACCGCAGGTTCCCCCAGCCTCAGGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR GCA 90 bp CCCCCAGATAGAAGCAAGACCTTGCTTTGCAGCCCTGGCAGGCAGGATGCAGTCGAGCTCAGATATGTCTaGCTCGAAAGCTGGCTTATG +
Preference number: 4 (lower is better)
Translates to: PPDRSKTLLCSPGRQDAVELRYV*LESWLM
Trigger: CATAAGCCAGCTTTCGAGGCAGACATATCTGAGCTC...GACTGCATCCTGCCTGCCAGGGCTGCAAAGCAAGGTCTTGCTTCTATCTGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR GCA 90 bp CCTGTGTCTGGTCTACATGCAGGCGTGTCTTGTGATAAATCCTGTTACGGGCATCTCCAAAGCTGCCGCTaGTGGTCCGCTCCAGCATCT +
Preference number: 4 (lower is better)
Translates to: PVSGLHAGVSCDKSCYGHLQSCR*WSAPAS
Trigger: AGATGCTGGAGCGGACCAGCAGCGGCAGCTTTGGAG...ATGCCCGTAACAGGATTTATCACAAGACACGCCTGCATGTAGACCAGACACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR GCA 90 bp CCTATCTGGGCTATGAGTGCTTGGAAGGATCCCAGGCATACACAGAGGGCCACAAGAAGTCAAGGGACTTaGCCCCAGGTCCCACTAACA +
Preference number: 4 (lower is better)
Translates to: PIWAMSAWKDPRHTQRATRSQGT*PQVPLT
Trigger: TGTTAGTGGGACCTGGGGGCAAGTCCCTTGACTTCT...TGTGGCCCTCTGTGTATGCCTGGGATCCTTCCAAGCACTCATAGCCCAGATAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR GCA 90 bp ATCTGGGCTATGAGTGCTTGGAAGGATCCCAGGCATACACAGAGGGCCACAGCCTATCTGGGCTATGAGTaGTTGGAAGGATCCCAGGCA +
Preference number: 4 (lower is better)
Translates to: IWAMSAWKDPRHTQRATAYLGYE*LEGSQA
Trigger: TGCCTGGGATCCTTCCAAGCACTCATAGCCCAGATA...GGCTGTGGCCCTCTGTGTATGCCTGGGATCCTTCCAAGCACTCATAGCCCAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR GCA 90 bp CCTATCTGGGCTATGAGTGCTTGGAAGGATCCCAGGCATACACAGAGGGCCACAACCTCCCAATTCCCATaGCTACCCTTGTCTCACTGC +
Preference number: 4 (lower is better)
Translates to: PIWAMSAWKDPRHTQRATTSQFP*LPLSHC
Trigger: GCAGTGAGACAAGGGTAGGCATGGGAATTGGGAGGT...TGTGGCCCTCTGTGTATGCCTGGGATCCTTCCAAGCACTCATAGCCCAGATAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673966.1
CDS-3UTR CCA 90 bp TGTCTGGTCTACATGCAGGCGTGTCTTGTGATAAATCCTGTTACGGGCATGTGTGGCTTATGCAGGTCCTaGGCCAGCACGTCGCGCAGA +
Preference number: 4 (lower is better)
Translates to: CLVYMQACLVINPVTGMCGLCRS*ASTSRR
Trigger: TCTGCGCGACGTGCTGGCCCAGGACCTGCATAAGCC...ACACATGCCCGTAACAGGATTTATCACAAGACACGCCTGCATGTAGACCAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR CCA 90 bp CCTGTGTCTGGTCTACATGCAGGCGTGTCTTGTGATAAATCCTGTTACGGGCATACGGCAAAGCAGCTCTaGTCCAGGTACTGGGGCAGC +
Preference number: 4 (lower is better)
Translates to: PVSGLHAGVSCDKSCYGHTAKQL*SRYWGS
Trigger: GCTGCCCCAGTACCTGGACCAGAGCTGCTTTGCCGT...ATGCCCGTAACAGGATTTATCACAAGACACGCCTGCATGTAGACCAGACACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR CCA 90 bp CCTATCTGGGCTATGAGTGCTTGGAAGGATCCCAGGCATACACAGAGGGCCACAATCTGGTTCACAACCTaGCTGCTGTTGGAGAAGGCG +
Preference number: 4 (lower is better)
Translates to: PIWAMSAWKDPRHTQRATIWFTT*LLLEKA
Trigger: CGCCTTCTCCAACAGCAGCCAGGTTGTGAACCAGAT...TGTGGCCCTCTGTGTATGCCTGGGATCCTTCCAAGCACTCATAGCCCAGATAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR CCA 90 bp TGTCTGGTCTACATGCAGGCGTGTCTTGTGATAAATCCTGTTACGGGCATGTGTTGGGGGAGGCAGTGCTaGTGCAGTTGGGATGGGGCA +
Preference number: 4 (lower is better)
Translates to: CLVYMQACLVINPVTGMCWGRQC*CSWDGA
Trigger: TGCCCCATCCCAACTGCACCAGCACTGCCTCCCCCA...ACACATGCCCGTAACAGGATTTATCACAAGACACGCCTGCATGTAGACCAGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR CCA 90 bp CAACCTGAGGCTGGGGGAACCTGCGGTCTGGAGGAACAATGTGAGTTGGGAGCAACTAACACTGTGCAGTaGAGTGATGCAAACCCCAGT +
Preference number: 4 (lower is better)
Translates to: QPEAGGTCGLEEQCELGATNTVQ*SDANPS
Trigger: ACTGGGGTTTGCATCACTCCACTGCACAGTGTTAGT...TGCTCCCAACTCACATTGTTCCTCCAGACCGCAGGTTCCCCCAGCCTCAGGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR TCA 90 bp GGTTTTCTGGTGGAGACGGCCGTGGTAGGTAAGCATCTGCAGCTCATCTGGAATTCTGGAGGAACAATGTaGGTTGGGAGCATAAGCCCC +
Preference number: 4 (lower is better)
Translates to: GFLVETAVVGKHLQLIWNSGGTM*VGSISP
Trigger: GGGGCTTATGCTCCCAACTCACATTGTTCCTCCAGA...ATTCCAGATGAGCTGCAGATGCTTACCTACCACGGCCGTCTCCACCAGAAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR GCA 90 bp CCTGTGTCTGGTCTACATGCAGGCGTGTCTTGTGATAAATCCTGTTACGGGCATTCGAAAGCTGGCTTATaGAGGTCCTGGGCCAGCACG +
Preference number: 4 (lower is better)
Translates to: PVSGLHAGVSCDKSCYGHSKAGL*RSWAST
Trigger: CGTGCTGGCCCAGGACCTGCATAAGCCAGCTTTCGA...ATGCCCGTAACAGGATTTATCACAAGACACGCCTGCATGTAGACCAGACACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR GCA 90 bp TGTCTGGTCTACATGCAGGCGTGTCTTGTGATAAATCCTGTTACGGGCATGTGTCTCCAAAGCTGCCGCTaGTGGTCCGCTCCAGCATCT +
Preference number: 4 (lower is better)
Translates to: CLVYMQACLVINPVTGMCLQSCR*WSAPAS
Trigger: AGATGCTGGAGCGGACCAGCAGCGGCAGCTTTGGAG...ACACATGCCCGTAACAGGATTTATCACAAGACACGCCTGCATGTAGACCAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR GCA 90 bp CCTGTGTCTGGTCTACATGCAGGCGTGTCTTGTGATAAATCCTGTTACGGGCATGAACCAGAGGGGTGGTaGAGAGACCAGTGTGGGATG +
Preference number: 4 (lower is better)
Translates to: PVSGLHAGVSCDKSCYGHEPEGW*RDQCGM
Trigger: CATCCCACACTGGTCTCTGCACCACCCCTCTGGTTC...ATGCCCGTAACAGGATTTATCACAAGACACGCCTGCATGTAGACCAGACACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR CCA 90 bp GGTTTTCTGGTGGAGACGGCCGTGGTAGGTAAGCATCTGCAGCTCATCTGGAATATCTGGTTCACAACCTaGCTGCTGTTGGAGAAGGCG +
Preference number: 4 (lower is better)
Translates to: GFLVETAVVGKHLQLIWNIWFTT*LLLEKA
Trigger: CGCCTTCTCCAACAGCAGCCAGGTTGTGAACCAGAT...ATTCCAGATGAGCTGCAGATGCTTACCTACCACGGCCGTCTCCACCAGAAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR CCA 90 bp CCTGTGTCTGGTCTACATGCAGGCGTGTCTTGTGATAAATCCTGTTACGGGCATCTGGTGCAGTTGGGATaGGGCAGAGATGGAAGTGCG +
Preference number: 4 (lower is better)
Translates to: PVSGLHAGVSCDKSCYGHLVQLG*GRDGSA
Trigger: CGCACTTCCATCTCTGCCCCATCCCAACTGCACCAG...ATGCCCGTAACAGGATTTATCACAAGACACGCCTGCATGTAGACCAGACACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR GCA 90 bp TGTCTGGTCTACATGCAGGCGTGTCTTGTGATAAATCCTGTTACGGGCATGTGTCCCTGGGTCCTTCGCTaGACCTCCACTCCCTTTCTT +
Preference number: 4 (lower is better)
Translates to: CLVYMQACLVINPVTGMCPWVLR*TSTPFL
Trigger: AAGAAAGGGAGTGGAGGTGCAGCGAAGGACCCAGGG...ACACATGCCCGTAACAGGATTTATCACAAGACACGCCTGCATGTAGACCAGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349015.7
ENST00000673966.1
CDS-3UTR GCA 90 bp CCTGTGTCTGGTCTACATGCAGGCGTGTCTTGTGATAAATCCTGTTACGGGCATAGCAAGACCTTGCTTTaGAGCCCTGGCAGGCAGGAT +
Preference number: 4 (lower is better)
Translates to: PVSGLHAGVSCDKSCYGHSKTLL*SPGRQD
Trigger: ATCCTGCCTGCCAGGGCTGCAAAGCAAGGTCTTGCT...ATGCCCGTAACAGGATTTATCACAAGACACGCCTGCATGTAGACCAGACACAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR GCA 90 bp TGTCTGGTCTACATGCAGGCGTGTCTTGTGATAAATCCTGTTACGGGCATGTGTACACCTGGCATGTTCTaGGGCCTCTTGGCCTCTCTC +
Preference number: 4 (lower is better)
Translates to: CLVYMQACLVINPVTGMCTPGMF*GLLASL
Trigger: GAGAGAGGCCAAGAGGCCGCAGAACATGCCAGGTGT...ACACATGCCCGTAACAGGATTTATCACAAGACACGCCTGCATGTAGACCAGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR CCA 90 bp TGTCTGGTCTACATGCAGGCGTGTCTTGTGATAAATCCTGTTACGGGCATGTGTGTCCGCTCCAGCATCTaGTTCACAACCTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: CLVYMQACLVINPVTGMCVRSSI*FTTWLL
Trigger: CAGCAGCCAGGTTGTGAACCAGATGCTGGAGCGGAC...ACACATGCCCGTAACAGGATTTATCACAAGACACGCCTGCATGTAGACCAGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR CCA 90 bp TGTCTGGTCTACATGCAGGCGTGTCTTGTGATAAATCCTGTTACGGGCATGTGTCTGGTGCAGTTGGGATaGGGCAGAGATGGAAGTGCG +
Preference number: 4 (lower is better)
Translates to: CLVYMQACLVINPVTGMCLVQLG*GRDGSA
Trigger: CGCACTTCCATCTCTGCCCCATCCCAACTGCACCAG...ACACATGCCCGTAACAGGATTTATCACAAGACACGCCTGCATGTAGACCAGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR TCA 90 bp CCTGTGTCTGGTCTACATGCAGGCGTGTCTTGTGATAAATCCTGTTACGGGCATCACGAGGGCTCCCTGTaGAGAAGATGTAGTCCAACT +
Preference number: 4 (lower is better)
Translates to: PVSGLHAGVSCDKSCYGHHEGSL*RRCSPT
Trigger: AGTTGGACTACATCTTCTTCACAGGGAGCCCTCGTG...ATGCCCGTAACAGGATTTATCACAAGACACGCCTGCATGTAGACCAGACACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR TCA 90 bp CCTATCTGGGCTATGAGTGCTTGGAAGGATCCCAGGCATACACAGAGGGCCACAAGAGTTTGGCATAAGTaGCTCCATTTTGGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: PIWAMSAWKDPRHTQRATRVWHK*LHFGSS
Trigger: GCTGGAACCAAAATGGAGTCACTTATGCCAAACTCT...TGTGGCCCTCTGTGTATGCCTGGGATCCTTCCAAGCACTCATAGCCCAGATAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR TCA 90 bp CCTGTGTCTGGTCTACATGCAGGCGTGTCTTGTGATAAATCCTGTTACGGGCATCGTTCTGGCAAAGGATaGGCTCAGATATGTCTGCCT +
Preference number: 4 (lower is better)
Translates to: PVSGLHAGVSCDKSCYGHRSGKG*AQICLP
Trigger: AGGCAGACATATCTGAGCTCATCCTTTGCCAGAACG...ATGCCCGTAACAGGATTTATCACAAGACACGCCTGCATGTAGACCAGACACAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR GCA 90 bp TGTCTGGTCTACATGCAGGCGTGTCTTGTGATAAATCCTGTTACGGGCATGTGTATAGAAGCAAGACCTTaGTTTGCAGCCCTGGCAGGC +
Preference number: 4 (lower is better)
Translates to: CLVYMQACLVINPVTGMCIEARP*FAALAG
Trigger: GCCTGCCAGGGCTGCAAAGCAAGGTCTTGCTTCTAT...ACACATGCCCGTAACAGGATTTATCACAAGACACGCCTGCATGTAGACCAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR CCA 90 bp CTGGGCTATGAGTGCTTGGAAGGATCCCAGGCATACACAGAGGGCCACAGCCAAACAGATGAATTTATTTaGGAGGAGCAGAGGATTCCT +
Preference number: 4 (lower is better)
Translates to: LGYECLEGSQAYTEGHSQTDEFI*EEQRIP
Trigger: AGGAATCCTCTGCTCCTCCCAAATAAATTCATCTGT...TTGGCTGTGGCCCTCTGTGTATGCCTGGGATCCTTCCAAGCACTCATAGCCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR CCA 90 bp AAGCTTTTAAAGGACAGAAGTCCATGTAAGCAGCTTTTAAACAAGGTTTGTAAGCCCGTTGGAGGCGGGTaGGACGCTCACAGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: KLLKDRSPCKQLLNKVCKPVGGG*DAHRRV
Trigger: CACCCTCCTGTGAGCGTCCCACCCGCCTCCAACGGG...CTTACAAACCTTGTTTAAAAGCTGCTTACATGGACTTCTGTCCTTTAAAAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR CCA 90 bp TGTCTGGTCTACATGCAGGCGTGTCTTGTGATAAATCCTGTTACGGGCATGTGTACTAACACTGTGCAGTaGAGTGATGCAAACCCCAGT +
Preference number: 4 (lower is better)
Translates to: CLVYMQACLVINPVTGMCTNTVQ*SDANPS
Trigger: ACTGGGGTTTGCATCACTCCACTGCACAGTGTTAGT...ACACATGCCCGTAACAGGATTTATCACAAGACACGCCTGCATGTAGACCAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR TCA 90 bp AAGCTTTTAAAGGACAGAAGTCCATGTAAGCAGCTTTTAAACAAGGTTTGTAAGGACCAGTGTGGGATGTaGGAGGATCCCTGGGGGAGG +
Preference number: 4 (lower is better)
Translates to: KLLKDRSPCKQLLNKVCKDQCGM*EDPWGR
Trigger: CCTCCCCCAGGGATCCTCTCACATCCCACACTGGTC...CTTACAAACCTTGTTTAAAAGCTGCTTACATGGACTTCTGTCCTTTAAAAGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR TCA 90 bp TGTCTGGTCTACATGCAGGCGTGTCTTGTGATAAATCCTGTTACGGGCATGTGTAGAGTTTGGCATAAGTaGCTCCATTTTGGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: CLVYMQACLVINPVTGMCRVWHK*LHFGSS
Trigger: GCTGGAACCAAAATGGAGTCACTTATGCCAAACTCT...ACACATGCCCGTAACAGGATTTATCACAAGACACGCCTGCATGTAGACCAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR GCA 90 bp AAGCTTTTAAAGGACAGAAGTCCATGTAAGCAGCTTTTAAACAAGGTTTGTAAGCATGCTGCCTCCAGATaGGCAGGCTCTGCTCCTACC +
Preference number: 4 (lower is better)
Translates to: KLLKDRSPCKQLLNKVCKHAASR*AGSAPT
Trigger: GGTAGGAGCAGAGCCTGCGCATCTGGAGGCAGCATG...CTTACAAACCTTGTTTAAAAGCTGCTTACATGGACTTCTGTCCTTTAAAAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349015.7
ENST00000673966.1
CDS-3UTR GCA 90 bp AAGCTTTTAAAGGACAGAAGTCCATGTAAGCAGCTTTTAAACAAGGTTTGTAAGAGCTCTGGGAGCCCATaGCCCAGCGTAACAGCTGCT +
Preference number: 4 (lower is better)
Translates to: KLLKDRSPCKQLLNKVCKSSGSP*PSVTAA
Trigger: AGCAGCTGTTACGCTGGGGCATGGGCTCCCAGAGCT...CTTACAAACCTTGTTTAAAAGCTGCTTACATGGACTTCTGTCCTTTAAAAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR GCA 90 bp AAGCTTTTAAAGGACAGAAGTCCATGTAAGCAGCTTTTAAACAAGGTTTGTAAGTCGAAAGCTGGCTTATaGAGGTCCTGGGCCAGCACG +
Preference number: 4 (lower is better)
Translates to: KLLKDRSPCKQLLNKVCKSKAGL*RSWAST
Trigger: CGTGCTGGCCCAGGACCTGCATAAGCCAGCTTTCGA...CTTACAAACCTTGTTTAAAAGCTGCTTACATGGACTTCTGTCCTTTAAAAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR CCA 90 bp AAGCTTTTAAAGGACAGAAGTCCATGTAAGCAGCTTTTAAACAAGGTTTGTAAGGCCGACTCCCCCGAATaGCACGGACAGCAGAGATAT +
Preference number: 4 (lower is better)
Translates to: KLLKDRSPCKQLLNKVCKADSPE*HGQQRY
Trigger: ATATCTCTGCTGTCCGTGCCATTCGGGGGAGTCGGC...CTTACAAACCTTGTTTAAAAGCTGCTTACATGGACTTCTGTCCTTTAAAAGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR CCA 90 bp TGTCTGGTCTACATGCAGGCGTGTCTTGTGATAAATCCTGTTACGGGCATGTGTACAGATGAATTTATTTaGGAGGAGCAGAGGATTCCT +
Preference number: 4 (lower is better)
Translates to: CLVYMQACLVINPVTGMCTDEFI*EEQRIP
Trigger: AGGAATCCTCTGCTCCTCCCAAATAAATTCATCTGT...ACACATGCCCGTAACAGGATTTATCACAAGACACGCCTGCATGTAGACCAGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR CCA 90 bp AAGCTTTTAAAGGACAGAAGTCCATGTAAGCAGCTTTTAAACAAGGTTTGTAAGATCCTCCCAGGAGACTaGCAGCTCCCAAACCAACTC +
Preference number: 4 (lower is better)
Translates to: KLLKDRSPCKQLLNKVCKILPGD*QLPNQL
Trigger: GAGTTGGTTTGGGAGCTGCCAGTCTCCTGGGAGGAT...CTTACAAACCTTGTTTAAAAGCTGCTTACATGGACTTCTGTCCTTTAAAAGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349015.7
ENST00000673966.1
CDS-3UTR TCA 90 bp AAGCTTTTAAAGGACAGAAGTCCATGTAAGCAGCTTTTAAACAAGGTTTGTAAGAGGGTTCCTTCCAGATaGAGACCGAGTCCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: KLLKDRSPCKQLLNKVCKRVPSR*RPSPAS
Trigger: TGAAGCTGGACTCGGTCTTCATCTGGAAGGAACCCT...CTTACAAACCTTGTTTAAAAGCTGCTTACATGGACTTCTGTCCTTTAAAAGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR TCA 90 bp AAGCTTTTAAAGGACAGAAGTCCATGTAAGCAGCTTTTAAACAAGGTTTGTAAGCACGAGGGCTCCCTGTaGAGAAGATGTAGTCCAACT +
Preference number: 4 (lower is better)
Translates to: KLLKDRSPCKQLLNKVCKHEGSL*RRCSPT
Trigger: AGTTGGACTACATCTTCTTCACAGGGAGCCCTCGTG...CTTACAAACCTTGTTTAAAAGCTGCTTACATGGACTTCTGTCCTTTAAAAGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR TCA 90 bp AAGCTTTTAAAGGACAGAAGTCCATGTAAGCAGCTTTTAAACAAGGTTTGTAAGCGTTCTGGCAAAGGATaGGCTCAGATATGTCTGCCT +
Preference number: 4 (lower is better)
Translates to: KLLKDRSPCKQLLNKVCKRSGKG*AQICLP
Trigger: AGGCAGACATATCTGAGCTCATCCTTTGCCAGAACG...CTTACAAACCTTGTTTAAAAGCTGCTTACATGGACTTCTGTCCTTTAAAAGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR TCA 90 bp AAGCTTTTAAAGGACAGAAGTCCATGTAAGCAGCTTTTAAACAAGGTTTGTAAGGCAGAGATATGTAGGTaGAGCCCTCATTGCCTCCAA +
Preference number: 4 (lower is better)
Translates to: KLLKDRSPCKQLLNKVCKAEICR*SPHCLQ
Trigger: TTGGAGGCAATGAGGGCTTCACCTACATATCTCTGC...CTTACAAACCTTGTTTAAAAGCTGCTTACATGGACTTCTGTCCTTTAAAAGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR CCA 90 bp AAGCTTTTAAAGGACAGAAGTCCATGTAAGCAGCTTTTAAACAAGGTTTGTAAGACAGATGAATTTATTTaGGAGGAGCAGAGGATTCCT +
Preference number: 4 (lower is better)
Translates to: KLLKDRSPCKQLLNKVCKTDEFI*EEQRIP
Trigger: AGGAATCCTCTGCTCCTCCCAAATAAATTCATCTGT...CTTACAAACCTTGTTTAAAAGCTGCTTACATGGACTTCTGTCCTTTAAAAGCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS GCA 90 bp GGCACGGGCCCTCCTGAAAGAGGACAGGGACGCTGCTCCAGCCCCTaGCGGGGCCCACTCTCCACGGCCCACCTTATGCAGGTCCTGGGC +
Preference number: 5 (lower is better)
Translates to: GTGPPERGQGRCSSP*RGPLSTAHLMQVLG
Trigger: GCCCAGGACCTGCATAAGGTGGGCCGTGGAGAGTGGGCCCCGGCAGGGGCTGGAGCAGCGTCCCTGTCCTCTTTCAGGAGGGCCCGTGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673808.1
CDS CCA 90 bp CCAGGCCTCAGCCCTGCTCTGCTGACTGCGATCCTCCCAGGAGACTaGCAGCTCCCAAACCAACTCCCGTGCCCACGCCTGGCAATGGGG +
Preference number: 5 (lower is better)
Translates to: PGLSPALLTAILPGD*QLPNQLPCPRLAMG
Trigger: CCCCATTGCCAGGCGTGGGCACGGGAGTTGGTTTGGGAGCTGCCAGTCTCCTGGGAGGATCGCAGTCAGCAGAGCAGGGCTGAGGCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000349015.7
ENST00000534425.6
ENST00000673808.1
ENST00000673966.1
ENST00000674110.1
CDS GCA 90 bp GAGGCGGGTGGGACGCTCACAGGAGGGTGCAGCTCTGGGAGCCCATaGCCCAGCGTAACAGCTGCTGGTTCCAGTCGGTATAGGGTGGGT +
Preference number: 5 (lower is better)
Translates to: EAGGTLTGGCSSGSP*PSVTAAGSSRYRVG
Trigger: ACCCACCCTATACCGACTGGAACCAGCAGCTGTTACGCTGGGGCATGGGCTCCCAGAGCTGCACCCTCCTGTGAGCGTCCCACCCGCCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000531248.1
ENST00000673966.1
CDS GCA 90 bp CAACTCCCGTGCCCACGCCCTTGTCTCACTGCCAGGACCTATAGCTaGTCGGTGTCTGCCCTGTTCTTCCAGGGCCCTGCCCCCAGGGAC +
Preference number: 5 (lower is better)
Translates to: QLPCPRPCLTARTYS*SVSALFFQGPAPRD
Trigger: GTCCCTGGGGGCAGGGCCCTGGAAGAACAGGGCAGACACCGAGCAGCTATAGGTCCTGGCAGTGAGACAAGGGCGTGGGCACGGGAGTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673873.1
CDS GCA 90 bp CGAAGGGGTCCATCCCAGCGTGGGCTCTGCCCCTGGGTCCTTCGCTaGACCTCCACTCCCTTTCTTGGACATGCTGCCTCCAGATGCGCA +
Preference number: 5 (lower is better)
Translates to: RRGPSQRGLCPWVLR*TSTPFLGHAASRCA
Trigger: TGCGCATCTGGAGGCAGCATGTCCAAGAAAGGGAGTGGAGGTGCAGCGAAGGACCCAGGGGCAGAGCCCACGCTGGGATGGACCCCTTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349015.7
CDS GCA 90 bp CCTCGAAAGCTGGCCCAGCGTGGGCTCTGCCCCTGGGTCCTTCGCTaGACCTCCACTCCCTTTCTTGGACATGCTGCCTCCAGATGCGCA +
Preference number: 5 (lower is better)
Translates to: PRKLAQRGLCPWVLR*TSTPFLGHAASRCA
Trigger: TGCGCATCTGGAGGCAGCATGTCCAAGAAAGGGAGTGGAGGTGCAGCGAAGGACCCAGGGGCAGAGCCCACGCTGGGCCAGCTTTCGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674110.1
CDS CCA 90 bp CCAGGCCTCAGCCCTGCTCTGCTGACTGCGATCCTCCCAGGAGACTaGCAGCTCCCAAACCAACTCCCGTGCCCACGCCCTTGTCTCACT +
Preference number: 5 (lower is better)
Translates to: PGLSPALLTAILPGD*QLPNQLPCPRPCLT
Trigger: AGTGAGACAAGGGCGTGGGCACGGGAGTTGGTTTGGGAGCTGCCAGTCTCCTGGGAGGATCGCAGTCAGCAGAGCAGGGCTGAGGCCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673873.1
CDS-3UTR CAA 90 bp CAGCTCCAGCAACCTGAGGCTGGGGGAACCTGCGGTCTGGAGGAACAATGTGAGTCTCTGTGTGACCCGTaGGAGGCGGGTGGGACGCTC +
Preference number: 5 (lower is better)
Translates to: QLQQPEAGGTCGLEEQCESLCDP*EAGGTL
Trigger: GAGCGTCCCACCCGCCTCCAACGGGTCACACAGAGA...CTCACATTGTTCCTCCAGACCGCAGGTTCCCCCAGCCTCAGGTTGCTGGAGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000531248.1
ENST00000673966.1
CDS TCA 90 bp CAGCCATGGAGCCTGCATCACAGGGTGGCTGTGAGTGTTCAGGAGTaGAGGTCAGGTGCCTGCCACACTCCACATGCCAGGGAGGGGGTC +
Preference number: 5 (lower is better)
Translates to: QPWSLHHRVAVSVQE*RSGACHTPHAREGV
Trigger: GACCCCCTCCCTGGCATGTGGAGTGTGGCAGGCACCTGACCTTCACTCCTGAACACTCACAGCCACCCTGTGATGCAGGCTCCATGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673808.1
CDS CCA 90 bp CATAAGCCCCTCATGGCTAGACTCAGGTTTCTCTGTGTGACCCGTTaGAGGCGGGTGGGACGCTCACAGGAGGGTGCAGCTCTGGGAGCC +
Preference number: 5 (lower is better)
Translates to: HKPLMARLRFLCVTR*RRVGRSQEGAALGA
Trigger: GGCTCCCAGAGCTGCACCCTCCTGTGAGCGTCCCACCCGCCTCCAACGGGTCACACAGAGAAACCTGAGTCTAGCCATGAGGGGCTTATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000531248.1
ENST00000673966.1
CDS-3UTR CAA 90 bp GGAGAGCAAAGGCCTGGAGGGCTCCACGCTCTCAACCGTTCAGGGCTGATGCCCGAGAAGTCAAGGGACTaGCCCCCAGGTCCCACTAAC +
Preference number: 5 (lower is better)
Translates to: GEQRPGGLHALNRSGLMPEKSRD*PPGPTN
Trigger: GTTAGTGGGACCTGGGGGCAAGTCCCTTGACTTCTC...GGGCATCAGCCCTGAACGGTTGAGAGCGTGGAGCCCTCCAGGCCTTTGCTCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS TCA 90 bp GTTGGGAGCATAAGCCCCTCATGGCTAGACTCAGGTTTCTCTGTGTaGCCCGTTGGAGGCGGGTGGGACGCTCACAGGAGGGTGCAGCTC +
Preference number: 5 (lower is better)
Translates to: VGSISPSWLDSGFSV*PVGGGWDAHRRVQL
Trigger: GAGCTGCACCCTCCTGTGAGCGTCCCACCCGCCTCCAACGGGTCACACAGAGAAACCTGAGTCTAGCCATGAGGGGCTTATGCTCCCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000531248.1
ENST00000673966.1
CDS CCA 90 bp TCCCAAACCAACTCCCGTGCCCACGCCTGGCAATGGGGTAATCAATaGGGTGATGCTCAGTGTTACCCAACAGGCGTGGGGCAGGGCTGC +
Preference number: 5 (lower is better)
Translates to: SQTNSRAHAWQWGNQ*GDAQCYPTGVGQGC
Trigger: GCAGCCCTGCCCCACGCCTGTTGGGTAACACTGAGCATCACCCCATTGATTACCCCATTGCCAGGCGTGGGCACGGGAGTTGGTTTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673966.1
CDS-3UTR CAA 90 bp CTGGGCTATGAGTGCTTGGAAGGATCCCAGGCATACACAGAGGGCCACAGCCAATCTCTGTGTGACCCGTaGGAGGCGGGTGGGACGCTC +
Preference number: 5 (lower is better)
Translates to: LGYECLEGSQAYTEGHSQSLCDP*EAGGTL
Trigger: GAGCGTCCCACCCGCCTCCAACGGGTCACACAGAGA...TTGGCTGTGGCCCTCTGTGTATGCCTGGGATCCTTCCAAGCACTCATAGCCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR CAA 90 bp CAGCAACCTGAGGCTGGGGGAACCTGCGGTCTGGAGGAACAATGTGAGTTGGGAATGTTCTGCGGCCTCTaGGCCTCTCTCGAGCAGCGT +
Preference number: 5 (lower is better)
Translates to: QQPEAGGTCGLEEQCELGMFCGL*ASLEQR
Trigger: ACGCTGCTCGAGAGAGGCCAAGAGGCCGCAGAACAT...TCCCAACTCACATTGTTCCTCCAGACCGCAGGTTCCCCCAGCCTCAGGTTGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR CAA 90 bp CAGCTCCAGCAACCTGAGGCTGGGGGAACCTGCGGTCTGGAGGAACAATGTGAGGAGAAGTCAAGGGACTaGCCCCCAGGTCCCACTAAC +
Preference number: 5 (lower is better)
Translates to: QLQQPEAGGTCGLEEQCEEKSRD*PPGPTN
Trigger: GTTAGTGGGACCTGGGGGCAAGTCCCTTGACTTCTC...CTCACATTGTTCCTCCAGACCGCAGGTTCCCCCAGCCTCAGGTTGCTGGAGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS CCA 90 bp GAGACTGGCAGCTCCCAAACCAACTCCCGTGCCCACGCCTGGCAATaGGGTAATCAATGGGGTGATGCTCAGTGTTACCCAACAGGCGTG +
Preference number: 5 (lower is better)
Translates to: ETGSSQTNSRAHAWQ*GNQWGDAQCYPTGV
Trigger: CACGCCTGTTGGGTAACACTGAGCATCACCCCATTGATTACCCCATTGCCAGGCGTGGGCACGGGAGTTGGTTTGGGAGCTGCCAGTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673966.1
CDS-3UTR CAA 90 bp CAACCTGAGGCTGGGGGAACCTGCGGTCTGGAGGAACAATGTGAGTTGGGAGCAGGCTTCTCCTGCCGGTaGATGAACTTGATGGCCTCG +
Preference number: 5 (lower is better)
Translates to: QPEAGGTCGLEEQCELGAGFSCR*MNLMAS
Trigger: CGAGGCCATCAAGTTCATCAACCGGCAGGAGAAGCC...TGCTCCCAACTCACATTGTTCCTCCAGACCGCAGGTTCCCCCAGCCTCAGGTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000531248.1
ENST00000673966.1
CDS-3UTR CAA 90 bp AGGCTGGGGGAACCTGCGGTCTGGAGGAACAATGTGAGTTGGGAGCATAAGCCCGGCTTCTCCTGCCGGTaGATGAACTTGATGGCCTCG +
Preference number: 5 (lower is better)
Translates to: RLGEPAVWRNNVSWEHKPGFSCR*MNLMAS
Trigger: CGAGGCCATCAAGTTCATCAACCGGCAGGAGAAGCC...GGGCTTATGCTCCCAACTCACATTGTTCCTCCAGACCGCAGGTTCCCCCAGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000531248.1
ENST00000673966.1
CDS-3UTR CAA 90 bp CAACCTGAGGCTGGGGGAACCTGCGGTCTGGAGGAACAATGTGAGTTGGGAGCAAAGCAAGACCTTGCTTaGCAGCCCTGGCAGGCAGGA +
Preference number: 5 (lower is better)
Translates to: QPEAGGTCGLEEQCELGAKQDLA*QPWQAG
Trigger: TCCTGCCTGCCAGGGCTGCAAAGCAAGGTCTTGCTT...TGCTCCCAACTCACATTGTTCCTCCAGACCGCAGGTTCCCCCAGCCTCAGGTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR CAA 90 bp ATCTGGGCTATGAGTGCTTGGAAGGATCCCAGGCATACACAGAGGGCCACAGCCATGTTCTGCGGCCTCTaGGCCTCTCTCGAGCAGCGT +
Preference number: 5 (lower is better)
Translates to: IWAMSAWKDPRHTQRATAMFCGL*ASLEQR
Trigger: ACGCTGCTCGAGAGAGGCCAAGAGGCCGCAGAACAT...GGCTGTGGCCCTCTGTGTATGCCTGGGATCCTTCCAAGCACTCATAGCCCAGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS TCA 90 bp CCCGGATTGGAGGAGTCTGGGATGAGCTATGGCACACAGGTGTCCTaGTGTTCATCCCAGGAACCTGGCCTCAGCGTGGTCACAGCTTTC +
Preference number: 5 (lower is better)
Translates to: PGLEESGMSYGTQVS*CSSQEPGLSVVTAF
Trigger: GAAAGCTGTGACCACGCTGAGGCCAGGTTCCTGGGATGAACATCAGGACACCTGTGTGCCATAGCTCATCCCAGACTCCTCCAATCCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531881.6
ENST00000533962.2
CDS TCA 90 bp ACCGCCTCCGGCCTGAATCAAGACCCGGATTGGAGGAGTCTGGGATaGGCTATGGCACACAGGTGTCCTGATGTTCATCCCAGGAACCTG +
Preference number: 5 (lower is better)
Translates to: TASGLNQDPDWRSLG*AMAHRCPDVHPRNL
Trigger: CAGGTTCCTGGGATGAACATCAGGACACCTGTGTGCCATAGCTCATCCCAGACTCCTCCAATCCGGGTCTTGATTCAGGCCGGAGGCGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531881.6
ENST00000533962.2
CDS CCA 90 bp TCCCAGGAGACTGGCAGCTCCCAAACCAACTCCCGTGCCCACGCCTaGCAATGGGGTAATCAATGGGGTGATGCTCAGTGTTACCCAACA +
Preference number: 5 (lower is better)
Translates to: SQETGSSQTNSRAHA*QWGNQWGDAQCYPT
Trigger: TGTTGGGTAACACTGAGCATCACCCCATTGATTACCCCATTGCCAGGCGTGGGCACGGGAGTTGGTTTGGGAGCTGCCAGTCTCCTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673966.1
CDS-3UTR CAA 90 bp CAACCTGAGGCTGGGGGAACCTGCGGTCTGGAGGAACAATGTGAGTTGGGAGCAGATAGAAGCAAGACCTaGCTTTGCAGCCCTGGCAGG +
Preference number: 5 (lower is better)
Translates to: QPEAGGTCGLEEQCELGADRSKT*LCSPGR
Trigger: CCTGCCAGGGCTGCAAAGCAAGGTCTTGCTTCTATC...TGCTCCCAACTCACATTGTTCCTCCAGACCGCAGGTTCCCCCAGCCTCAGGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS TCA 90 bp TGGGCAGTCGTCGCCTGTCCTCACATGTGCACATCTGGTGCTCGGTaGAATAATCACGGAGCCAGCAGCATCCAGTTGGAAGGACAGGGA +
Preference number: 5 (lower is better)
Translates to: WAVVACPHMCTSGAR*NNHGASSIQLEGQG
Trigger: TCCCTGTCCTTCCAACTGGATGCTGCTGGCTCCGTGATTATTTCACCGAGCACCAGATGTGCACATGTGAGGACAGGCGACGACTGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531881.6
CDS GCA 90 bp CCTGCATCACAGGGTGGCTGTGAGTGTTCAGGAGTGAAGGTCAGGTaGCTGCCACACTCCACATGCCAGGGAGGGGGTCTGTTAAACAAA +
Preference number: 5 (lower is better)
Translates to: PASQGGCECSGVKVR*LPHSTCQGGGLLNK
Trigger: TTTGTTTAACAGACCCCCTCCCTGGCATGTGGAGTGTGGCAGGCACCTGACCTTCACTCCTGAACACTCACAGCCACCCTGTGATGCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673808.1
CDS-3UTR CAA 90 bp CCTATCTGGGCTATGAGTGCTTGGAAGGATCCCAGGCATACACAGAGGGCCACAAAGCAAGACCTTGCTTaGCAGCCCTGGCAGGCAGGA +
Preference number: 5 (lower is better)
Translates to: PIWAMSAWKDPRHTQRATKQDLA*QPWQAG
Trigger: TCCTGCCTGCCAGGGCTGCAAAGCAAGGTCTTGCTT...TGTGGCCCTCTGTGTATGCCTGGGATCCTTCCAAGCACTCATAGCCCAGATAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR CAA 90 bp CTGGGCTATGAGTGCTTGGAAGGATCCCAGGCATACACAGAGGGCCACAGCCAAGATAGAAGCAAGACCTaGCTTTGCAGCCCTGGCAGG +
Preference number: 5 (lower is better)
Translates to: LGYECLEGSQAYTEGHSQDRSKT*LCSPGR
Trigger: CCTGCCAGGGCTGCAAAGCAAGGTCTTGCTTCTATC...TTGGCTGTGGCCCTCTGTGTATGCCTGGGATCCTTCCAAGCACTCATAGCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS TCA 90 bp TGGGCAGTCGTCGCCTGTCCTCACATGTGCACATCTGGTGCTCGGTaGAATAATCACGGAGCCAGCAGCATCTGCAGTTATGGTGGAAGG +
Preference number: 5 (lower is better)
Translates to: WAVVACPHMCTSGAR*NNHGASSICSYGGR
Trigger: CCTTCCACCATAACTGCAGATGCTGCTGGCTCCGTGATTATTTCACCGAGCACCAGATGTGCACATGTGAGGACAGGCGACGACTGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533962.2
CDS TCA 90 bp TGCGCCGGATGCAGTGGTACCAGGTGGCCTAGATATAGTCACCCTTaGGGCATCTGCTGCTCTAAAGCCTTGCTGGGAAGGGCTGTGAAA +
Preference number: 5 (lower is better)
Translates to: CAGCSGTRWPRYSHP*GICCSKALLGRAVK
Trigger: TTTCACAGCCCTTCCCAGCAAGGCTTTAGAGCAGCAGATGCCTCAAGGGTGACTATATCTAGGCCACCTGGTACCACTGCATCCGGCGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534425.6
CDS-3UTR CAA 90 bp GGTTTTCTGGTGGAGACGGCCGTGGTAGGTAAGCATCTGCAGCTCATCTGGAATGGCTTCTCCTGCCGGTaGATGAACTTGATGGCCTCG +
Preference number: 5 (lower is better)
Translates to: GFLVETAVVGKHLQLIWNGFSCR*MNLMAS
Trigger: CGAGGCCATCAAGTTCATCAACCGGCAGGAGAAGCC...ATTCCAGATGAGCTGCAGATGCTTACCTACCACGGCCGTCTCCACCAGAAAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS CCA 90 bp CATCTGGTGCTCGGTGAAATAATCACGGAGCCAGCAGCATCCAGTTaGAAGGACAGGGAAACCGAGGCTCCCAGAGACGACTTGATTTGC +
Preference number: 5 (lower is better)
Translates to: HLVLGEIITEPAASS*KDRETEAPRDDLIC
Trigger: GCAAATCAAGTCGTCTCTGGGAGCCTCGGTTTCCCTGTCCTTCCAACTGGATGCTGCTGGCTCCGTGATTATTTCACCGAGCACCAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531881.6
CDS-3UTR CAA 90 bp CCTGTGTCTGGTCTACATGCAGGCGTGTCTTGTGATAAATCCTGTTACGGGCATATGTTCTGCGGCCTCTaGGCCTCTCTCGAGCAGCGT +
Preference number: 5 (lower is better)
Translates to: PVSGLHAGVSCDKSCYGHMFCGL*ASLEQR
Trigger: ACGCTGCTCGAGAGAGGCCAAGAGGCCGCAGAACAT...ATGCCCGTAACAGGATTTATCACAAGACACGCCTGCATGTAGACCAGACACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR CAA 90 bp CCTGTGTCTGGTCTACATGCAGGCGTGTCTTGTGATAAATCCTGTTACGGGCATGAGAAGTCAAGGGACTaGCCCCCAGGTCCCACTAAC +
Preference number: 5 (lower is better)
Translates to: PVSGLHAGVSCDKSCYGHEKSRD*PPGPTN
Trigger: GTTAGTGGGACCTGGGGGCAAGTCCCTTGACTTCTC...ATGCCCGTAACAGGATTTATCACAAGACACGCCTGCATGTAGACCAGACACAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR CAA 90 bp TGCCCCTGTGACTGGGTCTGGCCAACCCTGACCGAGAGGGCAAAGGGCTGGAATATAAGTGACTCCATTTaGGTTCCAGCAACTTTCACA +
Preference number: 5 (lower is better)
Translates to: CPCDWVWPTLTERAKGWNISDSI*VPATFT
Trigger: TGTGAAAGTTGCTGGAACCAAAATGGAGTCACTTAT...ATTCCAGCCCTTTGCCCTCTCGGTCAGGGTTGGCCAGACCCAGTCACAGGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR CAA 90 bp CAAAGGCCTGGAGGGCTCCACGCTCTCAACCGTTCAGGGCTGATGCCCCTAAGAATAAGTGACTCCATTTaGGTTCCAGCAACTTTCACA +
Preference number: 5 (lower is better)
Translates to: QRPGGLHALNRSGLMPLRISDSI*VPATFT
Trigger: TGTGAAAGTTGCTGGAACCAAAATGGAGTCACTTAT...TCTTAGGGGCATCAGCCCTGAACGGTTGAGAGCGTGGAGCCCTCCAGGCCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000673966.1
CDS-3UTR CAA 90 bp TGTCTGGTCTACATGCAGGCGTGTCTTGTGATAAATCCTGTTACGGGCATGTGTTTCCCATGCCTACCCTaGTCTCACTGCCAGGACCTA +
Preference number: 5 (lower is better)
Translates to: CLVYMQACLVINPVTGMCFPCLP*SHCQDL
Trigger: TAGGTCCTGGCAGTGAGACAAGGGTAGGCATGGGAA...ACACATGCCCGTAACAGGATTTATCACAAGACACGCCTGCATGTAGACCAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673966.1
CDS GCA 72 bp CCTCCTGAAAGAGGACAGGGACGCTGCTCCAGCCCCTaGCGGGGCCCACTCTCCACGGCCCACCTTATGCAG +
Preference number: 6 (lower is better)
Translates to: PPERGQGRCSSP*RGPLSTAHLMQ
Trigger: CTGCATAAGGTGGGCCGTGGAGAGTGGGCCCCGGCAGGGGCTGGAGCAGCGTCCCTGTCCTCTTTCAGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673808.1
CDS CCA 72 bp AGCCCTGCTCTGCTGACTGCGATCCTCCCAGGAGACTaGCAGCTCCCAAACCAACTCCCGTGCCCACGCCCT +
Preference number: 6 (lower is better)
Translates to: SPALLTAILPGD*QLPNQLPCPRP
Trigger: AGGGCGTGGGCACGGGAGTTGGTTTGGGAGCTGCCAGTCTCCTGGGAGGATCGCAGTCAGCAGAGCAGGGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673873.1
CDS GCA 72 bp GGGACGCTCACAGGAGGGTGCAGCTCTGGGAGCCCATaGCCCAGCGTAACAGCTGCTGGTTCCAGTCGGTAT +
Preference number: 6 (lower is better)
Translates to: GTLTGGCSSGSP*PSVTAAGSSRY
Trigger: ATACCGACTGGAACCAGCAGCTGTTACGCTGGGGCATGGGCTCCCAGAGCTGCACCCTCCTGTGAGCGTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000531248.1
ENST00000673966.1
CDS GCA 72 bp CAGGGTGGCTGTGAGTGTTCAGGAGTGAAGGTCAGGTaGCTGCCACACTCCACATGCCAGGGAGGGGGTCTG +
Preference number: 6 (lower is better)
Translates to: QGGCECSGVKVR*LPHSTCQGGGL
Trigger: CAGACCCCCTCCCTGGCATGTGGAGTGTGGCAGGCACCTGACCTTCACTCCTGAACACTCACAGCCACCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673808.1
CDS CCA 72 bp GTGAGGCAGGTGGGGCAGAGGAACCCCTGCCCTTTCTaGGCAGTCGTCGCCTGTCCTCACATGTGCACATCT +
Preference number: 6 (lower is better)
Translates to: VRQVGQRNPCPF*AVVACPHMCTS
Trigger: AGATGTGCACATGTGAGGACAGGCGACGACTGCCCAGAAAGGGCAGGGGTTCCTCTGCCCCACCTGCCTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531881.6
ENST00000533962.2
CDS CCA 72 bp CTCATGGCTAGACTCAGGTTTCTCTGTGTGACCCGTTaGAGGCGGGTGGGACGCTCACAGGAGGGTGCAGCT +
Preference number: 6 (lower is better)
Translates to: LMARLRFLCVTR*RRVGRSQEGAA
Trigger: AGCTGCACCCTCCTGTGAGCGTCCCACCCGCCTCCAACGGGTCACACAGAGAAACCTGAGTCTAGCCATGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000531248.1
ENST00000673966.1
CDS TCA 72 bp ATAAGCCCCTCATGGCTAGACTCAGGTTTCTCTGTGTaGCCCGTTGGAGGCGGGTGGGACGCTCACAGGAGG +
Preference number: 6 (lower is better)
Translates to: ISPSWLDSGFSV*PVGGGWDAHRR
Trigger: CCTCCTGTGAGCGTCCCACCCGCCTCCAACGGGTCACACAGAGAAACCTGAGTCTAGCCATGAGGGGCTTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349015.7
ENST00000530069.6
ENST00000531248.1
ENST00000673966.1
CDS TCA 72 bp AGCCTGCATCACAGGGTGGCTGTGAGTGTTCAGGAGTaGAGGTCAGGTGCCTGCCACACTCCACATGCCAGG +
Preference number: 6 (lower is better)
Translates to: SLHHRVAVSVQE*RSGACHTPHAR
Trigger: CCTGGCATGTGGAGTGTGGCAGGCACCTGACCTTCACTCCTGAACACTCACAGCCACCCTGTGATGCAGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673808.1
CDS CCA 72 bp AACTCCCGTGCCCACGCCTGGCAATGGGGTAATCAATaGGGTGATGCTCAGTGTTACCCAACAGGCGTGGGG +
Preference number: 6 (lower is better)
Translates to: NSRAHAWQWGNQ*GDAQCYPTGVG
Trigger: CCCCACGCCTGTTGGGTAACACTGAGCATCACCCCATTGATTACCCCATTGCCAGGCGTGGGCACGGGAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673966.1
CDS CAA 72 bp AGGGATGACCGCCTCCGGCCTGAATCAAGACCCGGATaGGAGGAGTCTGGGATGAGCTATGGCACACAGGTG +
Preference number: 6 (lower is better)
Translates to: RDDRLRPESRPG*EESGMSYGTQV
Trigger: CACCTGTGTGCCATAGCTCATCCCAGACTCCTCCAATCCGGGTCTTGATTCAGGCCGGAGGCGGTCATCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531881.6
ENST00000533962.2
CDS GCA 72 bp AACCTCGTTCTGGCAAAGGATGAGCTCAGATATGTCTaGCTCGAAAGCTGGCCCAGCGTGGGCTCTGCCCCT +
Preference number: 6 (lower is better)
Translates to: NLVLAKDELRYV*LESWPSVGSAP
Trigger: AGGGGCAGAGCCCACGCTGGGCCAGCTTTCGAGGCAGACATATCTGAGCTCATCCTTTGCCAGAACGAGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674110.1
CDS TCA 72 bp GGCCTGAATCAAGACCCGGATTGGAGGAGTCTGGGATaGGCTATGGCACACAGGTGTCCTGATGTTCATCCC +
Preference number: 6 (lower is better)
Translates to: GLNQDPDWRSLG*AMAHRCPDVHP
Trigger: GGGATGAACATCAGGACACCTGTGTGCCATAGCTCATCCCAGACTCCTCCAATCCGGGTCTTGATTCAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531881.6
ENST00000533962.2
CDS TCA 72 bp GTCGCCTGTCCTCACATGTGCACATCTGGTGCTCGGTaGAATAATCACGGAGCCAGCAGCATCCAGTTGGAA +
Preference number: 6 (lower is better)
Translates to: VACPHMCTSGAR*NNHGASSIQLE
Trigger: TTCCAACTGGATGCTGCTGGCTCCGTGATTATTTCACCGAGCACCAGATGTGCACATGTGAGGACAGGCGAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531881.6
CDS TCA 72 bp TGCAGTGGTACCAGGTGGCCTAGATATAGTCACCCTTaGGGCATCTGCTGCTCTAAAGCCTTGCTGGGAAGG +
Preference number: 6 (lower is better)
Translates to: CSGTRWPRYSHP*GICCSKALLGR
Trigger: CCTTCCCAGCAAGGCTTTAGAGCAGCAGATGCCTCAAGGGTGACTATATCTAGGCCACCTGGTACCACTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534425.6
CDS GCA 72 bp AACCTCGTTCTGGCAAAGGATGAGCTCAGATATGTCTaGCTCGAAAGCTGGCTTATGCAGGTCCTGGGCCAG +
Preference number: 6 (lower is better)
Translates to: NLVLAKDELRYV*LESWLMQVLGQ
Trigger: CTGGCCCAGGACCTGCATAAGCCAGCTTTCGAGGCAGACATATCTGAGCTCATCCTTTGCCAGAACGAGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000349015.7
ENST00000525827.6
ENST00000528756.5
ENST00000530069.6
ENST00000531881.6
ENST00000533962.2
ENST00000534425.6
ENST00000673873.1
ENST00000673966.1
CDS CCA 72 bp ATCAAGACCCGGATTGGAGGAGTCTGGGATGAGCTATaGCACACAGGTGTCCTGATGTTCATCCCAGGAACC +
Preference number: 6 (lower is better)
Translates to: IKTRIGGVWDEL*HTGVLMFIPGT
Trigger: GGTTCCTGGGATGAACATCAGGACACCTGTGTGCCATAGCTCATCCCAGACTCCTCCAATCCGGGTCTTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531881.6
ENST00000533962.2
CDS TCA 72 bp GTCGCCTGTCCTCACATGTGCACATCTGGTGCTCGGTaGAATAATCACGGAGCCAGCAGCATCTGCAGTTAT +
Preference number: 6 (lower is better)
Translates to: VACPHMCTSGAR*NNHGASSICSY
Trigger: ATAACTGCAGATGCTGCTGGCTCCGTGATTATTTCACCGAGCACCAGATGTGCACATGTGAGGACAGGCGAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533962.2