RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ALDH3A1 (Homo sapiens)

Ensembl gene IDs: ENSG00000108602

Ensembl transcript IDs: ENST00000225740.11, ENST00000395555.7, ENST00000426645.2, ENST00000439102.6, ENST00000444455.5, ENST00000457500.6, ENST00000468746.5, ENST00000479677.6, ENST00000485231.1, ENST00000485472.3, ENST00000487650.2, ENST00000494157.6, ENST00000570414.1, ENST00000573368.5, ENST00000574162.5, ENST00000575103.1, ENST00000575860.1

Found 408 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR CCA 90 bp GGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAACCCCTCCCGATGGGACACAGTATaGCCAGGCCAGGCGGAGCAA +
Preference number: 2 (lower is better)
Translates to: GPHSDGTQYGQARRSNPSRWDTV*PGQAEQ
Trigger: TTGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCG...GGAGGGGTTGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
3UTR-3UTR TCA 90 bp TATTGGTCTAGAAAGGGGTGGAGACTTGGAATGGTGAGGCCTGGGCCCATGTGGGGCCAGGAGAGCCAGTaGGGGTGGTCCGCACTCCGA +
Preference number: 2 (lower is better)
Translates to: YWSRKGWRLGMVRPGPMWGQESQ*GWSALR
Trigger: TCGGAGTGCGGACCACCCTCACTGGCTCTCCTGGCC...CCACATGGGCCCAGGCCTCACCATTCCAAGTCTCCACCCCTTTCTAGACCAATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
3UTR-3UTR GCA 90 bp TATTGGTCTAGAAAGGGGTGGAGACTTGGAATGGTGAGGCCTGGGCCCATGTGGGGGCTGGGCTGGGGCTaGAGGAGCGATTCTCCCAGG +
Preference number: 2 (lower is better)
Translates to: YWSRKGWRLGMVRPGPMWGLGWG*RSDSPR
Trigger: CCTGGGAGAATCGCTCCTGCAGCCCCAGCCCAGCCC...CCACATGGGCCCAGGCCTCACCATTCCAAGTCTCCACCCCTTTCTAGACCAATA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
3UTR CCA 72 bp AAATTGTATTCGTCTCTTTATTGGTCTAGAAAGGGGTaGAGACTTGGAATGGTGAGGCCTGGGCCCATGTGG +
Preference number: 3 (lower is better)
Translates to: KLYSSLYWSRKG*RLGMVRPGPMW
Trigger: CCACATGGGCCCAGGCCTCACCATTCCAAGTCTCCACCCCTTTCTAGACCAATAAAGAGACGAATACAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR TCA 90 bp GGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAACCCCGCACCTGCAGCTGGCTaGGGGGCACGAGCGCGCCCT +
Preference number: 4 (lower is better)
Translates to: GGPHSDGTQYGQARRSNPAPAAG*GARARP
Trigger: AGGGCGCGCTCGTGCCCCTCAGCCAGCTGCAGGTGC...GGGGTTGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457500.6
CDS-3UTR TCA 90 bp GCCAGGCCAGGCGGAGCAACCCCTCCTCAGTGCTGGGTCATCTTGGCCGGGCTCGGCCAGGAGAGCCAGTaGGGGTGGTCCGCACTCCGA +
Preference number: 4 (lower is better)
Translates to: ARPGGATPPQCWVILAGLGQESQ*GWSALR
Trigger: TCGGAGTGCGGACCACCCTCACTGGCTCTCCTGGCC...GAGCCCGGCCAAGATGACCCAGCACTGAGGAGGGGTTGCTCCGCCTGGCCTGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468746.5
CDS-3UTR TCA 90 bp GGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAACCCCGGCCAGGAGAGCCAGTaGGGGTGGTCCGCACTCCGA +
Preference number: 4 (lower is better)
Translates to: GGPHSDGTQYGQARRSNPGQESQ*GWSALR
Trigger: TCGGAGTGCGGACCACCCTCACTGGCTCTCCTGGCC...GGGGTTGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CCA 90 bp GGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAACCCCGGGCTATGTAGCGAGTaGCGGCATCCCCGGTGCCCC +
Preference number: 4 (lower is better)
Translates to: GGPHSDGTQYGQARRSNPGLCSE*RHPRCP
Trigger: GGGGCACCGGGGATGCCGCCACTCGCTACATAGCCC...GGGGTTGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225740.11
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR TCA 90 bp AGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCGGCCAGGAGAGCCAGTaGGGGTGGTCCGCACTCCGA +
Preference number: 4 (lower is better)
Translates to: SEGGPHSDGTQYGQARRSGQESQ*GWSALR
Trigger: TCGGAGTGCGGACCACCCTCACTGGCTCTCCTGGCC...GCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR TCA 90 bp GTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAGGCCAGGAGAGCCAGTaGGGGTGGTCCGCACTCCGA +
Preference number: 4 (lower is better)
Translates to: VRVVRTPMGHSMARPGGAGQESQ*GWSALR
Trigger: TCGGAGTGCGGACCACCCTCACTGGCTCTCCTGGCC...TGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR TCA 90 bp GGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAACCCCTCCTGCCTTGCTAGCCCCTaGGAAGGTGACACCCGCCGC +
Preference number: 4 (lower is better)
Translates to: GPHSDGTQYGQARRSNPSCLASP*EGDTRR
Trigger: GCGGCGGGTGTCACCTTCTCAGGGGCTAGCAAGGCA...GGAGGGGTTGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457500.6
CDS-3UTR GCA 90 bp GGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAACCCCTCCTCCTGGATCAGGCGCTaGAGCGCCTCCAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: GPHSDGTQYGQARRSNPSSWIRR*SASSCW
Trigger: CCAGCAGCTGGAGGCGCTGCAGCGCCTGATCCAGGA...GGAGGGGTTGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
CDS-3UTR GCA 90 bp GCCAGGCCAGGCGGAGCAACCCCTCCTCAGTGCTGGGTCATCTTGGCCGGGCTCGCAACCCCTCCTCAGTaGTGGGTCATCTTGGCCGGG +
Preference number: 4 (lower is better)
Translates to: ARPGGATPPQCWVILAGLATPPQ*WVILAG
Trigger: CCCGGCCAAGATGACCCAGCACTGAGGAGGGGTTGC...GAGCCCGGCCAAGATGACCCAGCACTGAGGAGGGGTTGCTCCGCCTGGCCTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468746.5
CDS-3UTR GCA 90 bp GAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGGCTGGGCTGGGGCTaGAGGAGCGATTCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: EPVRVVRTPMGHSMARPGGLGWG*RSDSPR
Trigger: CCTGGGAGAATCGCTCCTGCAGCCCCAGCCCAGCCC...GCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR GCA 90 bp AGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCGGGCTGGGCTGGGGCTaGAGGAGCGATTCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: SEGGPHSDGTQYGQARRSGLGWG*RSDSPR
Trigger: CCTGGGAGAATCGCTCCTGCAGCCCCAGCCCAGCCC...GCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CCA 90 bp TATGGCCAGGCCAGGCGGAGCAACCCCTCCTCAGTGCTGGGTCATCTTGGCCGGGGGCTATGTAGCGAGTaGCGGCATCCCCGGTGCCCC +
Preference number: 4 (lower is better)
Translates to: YGQARRSNPSSVLGHLGRGLCSE*RHPRCP
Trigger: GGGGCACCGGGGATGCCGCCACTCGCTACATAGCCC...CCGGCCAAGATGACCCAGCACTGAGGAGGGGTTGCTCCGCCTGGCCTGGCCATA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000468746.5
CDS-3UTR CCA 90 bp GGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAACCCCTCCTGCATCACCGGGGACTaGGGGTCCACGTCCGTGAGG +
Preference number: 4 (lower is better)
Translates to: GPHSDGTQYGQARRSNPSCITGD*GSTSVR
Trigger: CCTCACGGACGTGGACCCCCAGTCCCCGGTGATGCA...GGAGGGGTTGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000225740.11
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CCA 90 bp GGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAACCCCTCCAGGCCTGGGCCCATGTaGGAGTGGGGTGTGCACAGG +
Preference number: 4 (lower is better)
Translates to: GPHSDGTQYGQARRSNPSRPGPM*EWGVHR
Trigger: CCTGTGCACACCCCACTCCCACATGGGCCCAGGCCT...GGAGGGGTTGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR TCA 90 bp GGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAACCCCGGGCTTGAGGACCACTaGGTTCCCTGCAGCGATGGC +
Preference number: 4 (lower is better)
Translates to: GGPHSDGTQYGQARRSNPGLEDH*VPCSDG
Trigger: GCCATCGCTGCAGGGAACTCAGTGGTCCTCAAGCCC...GGGGTTGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR TCA 90 bp GGAGAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCCAGGAGAGCCAGTaGGGGTGGTCCGCACTCCGA +
Preference number: 4 (lower is better)
Translates to: GEPVRVVRTPMGHSMARPGQESQ*GWSALR
Trigger: TCGGAGTGCGGACCACCCTCACTGGCTCTCCTGGCC...TGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR GCA 90 bp GAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCTGCTGGATCCGGAACTaGAGCGGACGGGTCCTGCCC +
Preference number: 4 (lower is better)
Translates to: EPVRVVRTPMGHSMARPGCWIRN*SGRVLP
Trigger: GGGCAGGACCCGTCCGCTGCAGTTCCGGATCCAGCA...GCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
CDS-3UTR GCA 90 bp AGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCTGCTGGATCCGGAACTaGAGCGGACGGGTCCTGCCC +
Preference number: 4 (lower is better)
Translates to: SEGGPHSDGTQYGQARRSCWIRN*SGRVLP
Trigger: GGGCAGGACCCGTCCGCTGCAGTTCCGGATCCAGCA...GCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
CDS-3UTR GCA 90 bp GGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAACCCCTCCTGGCGGCATCCCCGGTaGCCCCATAAGCCACCTTCT +
Preference number: 4 (lower is better)
Translates to: GPHSDGTQYGQARRSNPSWRHPR*PHKPPS
Trigger: AGAAGGTGGCTTATGGGGGCACCGGGGATGCCGCCA...GGAGGGGTTGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000225740.11
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR GCA 90 bp GGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAACCCCCATGGTAGGATCCCATaGCGCTGTTCCCCACGCCCC +
Preference number: 4 (lower is better)
Translates to: GGPHSDGTQYGQARRSNPHGRIP*RCSPRP
Trigger: GGGGCGTGGGGAACAGCGGCATGGGATCCTACCATG...GGGGTTGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000494157.6
CDS-3UTR GCA 90 bp GGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAACCCCTCCCATGGTAGGATCCCATaGCGCTGTTCCCCACGCCCC +
Preference number: 4 (lower is better)
Translates to: GPHSDGTQYGQARRSNPSHGRIP*RCSPRP
Trigger: GGGGCGTGGGGAACAGCGGCATGGGATCCTACCATG...GGAGGGGTTGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000494157.6
CDS-3UTR GCA 90 bp GCCAGGAGAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGGGCTGGGCTGGGGCTaGAGGAGCGATTCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: ARRASEGGPHSDGTQYGQGLGWG*RSDSPR
Trigger: CCTGGGAGAATCGCTCCTGCAGCCCCAGCCCAGCCC...CTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTCTCCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR GCA 90 bp GGAGAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGGCTGGGCTGGGGCTaGAGGAGCGATTCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: GEPVRVVRTPMGHSMARPGLGWG*RSDSPR
Trigger: CCTGGGAGAATCGCTCCTGCAGCCCCAGCCCAGCCC...TGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR GCA 90 bp TCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAACCCCTCCTCAGTGCTGGGGCTGGGCTGGGGCTaGAGGAGCGATTCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: SDGTQYGQARRSNPSSVLGLGWG*RSDSPR
Trigger: CCTGGGAGAATCGCTCCTGCAGCCCCAGCCCAGCCC...CAGCACTGAGGAGGGGTTGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000468746.5
CDS-3UTR GCA 90 bp GCCAGGAGAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGGGCTCTTGGCAGCGTaGTCGCGGCAGGGCCTTTCC +
Preference number: 4 (lower is better)
Translates to: ARRASEGGPHSDGTQYGQGLLAA*SRQGLS
Trigger: GGAAAGGCCCTGCCGCGAGCACGCTGCCAAGAGCCC...CTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTCTCCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457500.6
CDS-3UTR GCA 90 bp GGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAACCCCTCCCCTAAGCCGAACTGCTaGTGGGGGCTCTTGGCAGCG +
Preference number: 4 (lower is better)
Translates to: GPHSDGTQYGQARRSNPSPKPNC*WGLLAA
Trigger: CGCTGCCAAGAGCCCCCAGCAGCAGTTCGGCTTAGG...GGAGGGGTTGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000457500.6
CDS-3UTR CCA 90 bp AGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCTCCTGCTCCTGCTCCTaGATCAGGCGCTGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: SEGGPHSDGTQYGQARRSSCSCS*IRRCSA
Trigger: GGCGCTGCAGCGCCTGATCCAGGAGCAGGAGCAGGA...GCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
CDS-3UTR CCA 90 bp GTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCATCCTGCTCCTGCTCCTaGATCAGGCGCTGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: VRVVRTPMGHSMARPGGASCSCS*IRRCSA
Trigger: GGCGCTGCAGCGCCTGATCCAGGAGCAGGAGCAGGA...TGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
CDS-3UTR CCA 90 bp CCAGGAGAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGGGGCTATGTAGCGAGTaGCGGCATCCCCGGTGCCCC +
Preference number: 4 (lower is better)
Translates to: PGEPVRVVRTPMGHSMARGLCSE*RHPRCP
Trigger: GGGGCACCGGGGATGCCGCCACTCGCTACATAGCCC...CCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTCTCCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000225740.11
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CCA 90 bp GGAGAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGGCTATGTAGCGAGTaGCGGCATCCCCGGTGCCCC +
Preference number: 4 (lower is better)
Translates to: GEPVRVVRTPMGHSMARPGLCSE*RHPRCP
Trigger: GGGGCACCGGGGATGCCGCCACTCGCTACATAGCCC...TGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225740.11
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CCA 90 bp GGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAACCCCTCCTGCGCACGCACACGATaGGCAGCACAGGCCCGAAGA +
Preference number: 4 (lower is better)
Translates to: GPHSDGTQYGQARRSNPSCARTR*AAQARR
Trigger: TCTTCGGGCCTGTGCTGCCCATCGTGTGCGTGCGCA...GGAGGGGTTGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CCA 90 bp GGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAACCCCACCCCTCCTCAGTGCTaGGTCATCTTGGCCGGGCTC +
Preference number: 4 (lower is better)
Translates to: GGPHSDGTQYGQARRSNPTPPQC*VILAGL
Trigger: GAGCCCGGCCAAGATGACCCAGCACTGAGGAGGGGT...GGGGTTGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CCA 90 bp GTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAAGGCCTGGGCCCATGTaGGAGTGGGGTGTGCACAGG +
Preference number: 4 (lower is better)
Translates to: VRVVRTPMGHSMARPGGARPGPM*EWGVHR
Trigger: CCTGTGCACACCCCACTCCCACATGGGCCCAGGCCT...TGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CCA 90 bp TGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAACCCCTCAGGCCTGGGCCCATGTaGGAGTGGGGTGTGCACAGG +
Preference number: 4 (lower is better)
Translates to: WSALRWDTVWPGQAEQPLRPGPM*EWGVHR
Trigger: CCTGTGCACACCCCACTCCCACATGGGCCCAGGCCT...GAGGGGTTGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CCA 90 bp CCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAACCCCTCCTCAGTGCTGGAGGCCTGGGCCCATGTaGGAGTGGGGTGTGCACAGG +
Preference number: 4 (lower is better)
Translates to: PMGHSMARPGGATPPQCWRPGPM*EWGVHR
Trigger: CCTGTGCACACCCCACTCCCACATGGGCCCAGGCCT...CCAGCACTGAGGAGGGGTTGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468746.5
CDS-3UTR CCA 90 bp GGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAACCCCTCCTGGAATGGTGAGGCCTaGGCCCATGTGGGAGTGGGG +
Preference number: 4 (lower is better)
Translates to: GPHSDGTQYGQARRSNPSWNGEA*AHVGVG
Trigger: CCCCACTCCCACATGGGCCCAGGCCTCACCATTCCA...GGAGGGGTTGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR TCA 90 bp GGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAACCCCTCCGCTTCACGGCCTCGCTaGTCTTGCTCATGGCGCCTT +
Preference number: 4 (lower is better)
Translates to: GPHSDGTQYGQARRSNPSASRPR*SCSWRL
Trigger: AAGGCGCCATGAGCAAGATCAGCGAGGCCGTGAAGC...GGAGGGGTTGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000468746.5
CDS-3UTR TCA 90 bp GGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAACCCCAGTTCCAGGTGCCAATaGCGAGGACCACGCCCAGTG +
Preference number: 4 (lower is better)
Translates to: GGPHSDGTQYGQARRSNPSSRCQ*RGPRPV
Trigger: CACTGGGCGTGGTCCTCGTCATTGGCACCTGGAACT...GGGGTTGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR TCA 90 bp GTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAGGGCTTGAGGACCACTaGGTTCCCTGCAGCGATGGC +
Preference number: 4 (lower is better)
Translates to: VRVVRTPMGHSMARPGGAGLEDH*VPCSDG
Trigger: GCCATCGCTGCAGGGAACTCAGTGGTCCTCAAGCCC...TGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR TCA 90 bp GGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAACCCCTCCGGTCGAACCTCTCCTTaGGCAGCTCCGTGGTCTCAG +
Preference number: 4 (lower is better)
Translates to: GPHSDGTQYGQARRSNPSGRTSP*AAPWSQ
Trigger: CTGAGACCACGGAGCTGCTCAAGGAGAGGTTCGACC...GGAGGGGTTGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR TCA 90 bp GGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAACCCCTCCGCTTCACGGCCTCGCTaGTCTTGCTCATGGCGCTTG +
Preference number: 4 (lower is better)
Translates to: GPHSDGTQYGQARRSNPSASRPR*SCSWRL
Trigger: CAAGCGCCATGAGCAAGATCAGCGAGGCCGTGAAGC...GGAGGGGTTGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444455.5
CDS-3UTR TCA 90 bp TGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAACCCCTCGCTTCACGGCCTCGCTaGTCTTGCTCATGGCGCCTG +
Preference number: 4 (lower is better)
Translates to: WSALRWDTVWPGQAEQPLASRPR*SCSWRL
Trigger: CAGGCGCCATGAGCAAGATCAGCGAGGCCGTGAAGC...GAGGGGTTGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457500.6
CDS-3UTR GCA 90 bp GCCAGGAGAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGTGCTGGATCCGGAACTaGAGCGGACGGGTCCTGCCC +
Preference number: 4 (lower is better)
Translates to: ARRASEGGPHSDGTQYGQCWIRN*SGRVLP
Trigger: GGGCAGGACCCGTCCGCTGCAGTTCCGGATCCAGCA...CTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTCTCCTGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
CDS-3UTR GCA 90 bp GTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCATGCAGCGCCTCCAGCTaGTGGATCCGGAACTGCAGC +
Preference number: 4 (lower is better)
Translates to: VRVVRTPMGHSMARPGGACSASS*WIRNCS
Trigger: GCTGCAGTTCCGGATCCAGCAGCTGGAGGCGCTGCA...TGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
CDS-3UTR GCA 90 bp GGAGAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCATCCTGGATCAGGCGCTaGAGCGCCTCCAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: GEPVRVVRTPMGHSMARPSWIRR*SASSCW
Trigger: CCAGCAGCTGGAGGCGCTGCAGCGCCTGATCCAGGA...TGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
CDS-3UTR GCA 90 bp CAGTATGGCCAGGCCAGGCGGAGCAACCCCTCCTCAGTGCTGGGTCATCTTGGCTCCTGGATCAGGCGCTaGAGCGCCTCCAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: QYGQARRSNPSSVLGHLGSWIRR*SASSCW
Trigger: CCAGCAGCTGGAGGCGCTGCAGCGCCTGATCCAGGA...GCCAAGATGACCCAGCACTGAGGAGGGGTTGCTCCGCCTGGCCTGGCCATACTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468746.5
CDS-3UTR GCA 90 bp GAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCATTCTTGTGCAGGTCTaGGGCCAGCGCGCCCACCAG +
Preference number: 4 (lower is better)
Translates to: EPVRVVRTPMGHSMARPGILVQV*GQRAHQ
Trigger: CTGGTGGGCGCGCTGGCCGCAGACCTGCACAAGAAT...GCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
CDS-3UTR GCA 90 bp GGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAACCCCTCCCCACCCCCGTGCTaGCCGTGTACAGGATATGGT +
Preference number: 4 (lower is better)
Translates to: GGPHSDGTQYGQARRSNPSPPPC*PCTGYG
Trigger: ACCATATCCTGTACACGGGCAGCACGGGGGTGGGGA...GGGGTTGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR GCA 90 bp GTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCATGGCGGCATCCCCGGTaGCCCCATAAGCCACCTTCT +
Preference number: 4 (lower is better)
Translates to: VRVVRTPMGHSMARPGGAWRHPR*PHKPPS
Trigger: AGAAGGTGGCTTATGGGGGCACCGGGGATGCCGCCA...TGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225740.11
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR GCA 90 bp GAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCTGGCGGCATCCCCGGTaGCCCCATAAGCCACCTTCT +
Preference number: 4 (lower is better)
Translates to: EPVRVVRTPMGHSMARPGWRHPR*PHKPPS
Trigger: AGAAGGTGGCTTATGGGGGCACCGGGGATGCCGCCA...GCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225740.11
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR GCA 90 bp GTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCACATGGTAGGATCCCATaGCGCTGTTCCCCACGCCCC +
Preference number: 4 (lower is better)
Translates to: VRVVRTPMGHSMARPGGAHGRIP*RCSPRP
Trigger: GGGGCGTGGGGAACAGCGGCATGGGATCCTACCATG...TGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000494157.6
CDS-3UTR GCA 90 bp AGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCCATGGTAGGATCCCATaGCGCTGTTCCCCACGCCCC +
Preference number: 4 (lower is better)
Translates to: SEGGPHSDGTQYGQARRSHGRIP*RCSPRP
Trigger: GGGGCGTGGGGAACAGCGGCATGGGATCCTACCATG...GCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000494157.6
CDS-3UTR GCA 90 bp AGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCGCAACCCCTCCTCAGTaGTGGGTCATCTTGGCCGGG +
Preference number: 4 (lower is better)
Translates to: SEGGPHSDGTQYGQARRSATPPQ*WVILAG
Trigger: CCCGGCCAAGATGACCCAGCACTGAGGAGGGGTTGC...GCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR GCA 90 bp TGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAACCCCTCGGAAGGTCCACTTTCTaGCTCGCCTCCTCTCCCGCC +
Preference number: 4 (lower is better)
Translates to: WSALRWDTVWPGQAEQPLGRSTF*LASSPA
Trigger: GGCGGGAGAGGAGGCGAGGCAGAAAGTGGACCTTCC...GAGGGGTTGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457500.6
CDS-3UTR CCA 90 bp GAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCAGCGCCTCCAGCTGCTaGATCCGGAACTGCAGCGGA +
Preference number: 4 (lower is better)
Translates to: EPVRVVRTPMGHSMARPGSASSC*IRNCSG
Trigger: TCCGCTGCAGTTCCGGATCCAGCAGCTGGAGGCGCT...GCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
CDS-3UTR CCA 90 bp TGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAACCCCTCGCGCCCACCATGGGCTaGATGGTGAGGTTGAAGGGG +
Preference number: 4 (lower is better)
Translates to: WSALRWDTVWPGQAEQPLAPTMG*MVRLKG
Trigger: CCCCTTCAACCTCACCATCCAGCCCATGGTGGGCGC...GAGGGGTTGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CCA 90 bp GAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGCGCCCACCATGGGCTaGATGGTGAGGTTGAAGGGG +
Preference number: 4 (lower is better)
Translates to: EPVRVVRTPMGHSMARPGAPTMG*MVRLKG
Trigger: CCCCTTCAACCTCACCATCCAGCCCATGGTGGGCGC...GCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CCA 90 bp GTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAGCGCCCACCATGGGCTaGATGGTGAGGTTGAAGGGG +
Preference number: 4 (lower is better)
Translates to: VRVVRTPMGHSMARPGGAAPTMG*MVRLKG
Trigger: CCCCTTCAACCTCACCATCCAGCCCATGGTGGGCGC...TGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CCA 90 bp GAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCAGTTCCCTGCAGCGATaGCGCCCACCATGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: EPVRVVRTPMGHSMARPGSSLQR*RPPWAG
Trigger: TCCAGCCCATGGTGGGCGCCATCGCTGCAGGGAACT...GCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CCA 90 bp TGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAACCCCTCAGTTCCCTGCAGCGATaGCGCCCACCATGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: WSALRWDTVWPGQAEQPLSSLQR*RPPWAG
Trigger: TCCAGCCCATGGTGGGCGCCATCGCTGCAGGGAACT...GAGGGGTTGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CCA 90 bp CCAGGAGAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGTGCATCACCGGGGACTaGGGGTCCACGTCCGTGAGG +
Preference number: 4 (lower is better)
Translates to: PGEPVRVVRTPMGHSMARCITGD*GSTSVR
Trigger: CCTCACGGACGTGGACCCCCAGTCCCCGGTGATGCA...CCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTCTCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225740.11
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CCA 90 bp TGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAACCCCTCTGCGCACGCACACGATaGGCAGCACAGGCCCGAAGA +
Preference number: 4 (lower is better)
Translates to: WSALRWDTVWPGQAEQPLCARTR*AAQARR
Trigger: TCTTCGGGCCTGTGCTGCCCATCGTGTGCGTGCGCA...GAGGGGTTGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CCA 90 bp TGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAACCCCTCACCCCTCCTCAGTGCTaGGTCATCTTGGCCGGGCTC +
Preference number: 4 (lower is better)
Translates to: WSALRWDTVWPGQAEQPLTPPQC*VILAGL
Trigger: GAGCCCGGCCAAGATGACCCAGCACTGAGGAGGGGT...GAGGGGTTGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CCA 90 bp GGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAACCCCCGATGGGACACAGTATaGCCAGGCCAGGCGGAGCAA +
Preference number: 4 (lower is better)
Translates to: GGPHSDGTQYGQARRSNPRWDTV*PGQAEQ
Trigger: TTGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCG...GGGGTTGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CCA 90 bp GAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCTGGAATGGTGAGGCCTaGGCCCATGTGGGAGTGGGG +
Preference number: 4 (lower is better)
Translates to: EPVRVVRTPMGHSMARPGWNGEA*AHVGVG
Trigger: CCCCACTCCCACATGGGCCCAGGCCTCACCATTCCA...GCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CCA 90 bp TATGGCCAGGCCAGGCGGAGCAACCCCTCCTCAGTGCTGGGTCATCTTGGCCGGGCCTCTCCCGGTAACTaGGGCTCCTGGAACGGCAAG +
Preference number: 4 (lower is better)
Translates to: YGQARRSNPSSVLGHLGRASPGN*GSWNGK
Trigger: CTTGCCGTTCCAGGAGCCCCAGTTACCGGGAGAGGC...CCGGCCAAGATGACCCAGCACTGAGGAGGGGTTGCTCCGCCTGGCCTGGCCATA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468746.5
CDS-3UTR CCA 90 bp TGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAACCCCTCAAGCCGAACTGCTGCTaGGGGCTCTTGGCAGCGTGC +
Preference number: 4 (lower is better)
Translates to: WSALRWDTVWPGQAEQPLKPNCC*GLLAAC
Trigger: GCACGCTGCCAAGAGCCCCCAGCAGCAGTTCGGCTT...GAGGGGTTGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457500.6
CDS-3UTR CCA 90 bp TGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAACCCCTCCCTCACTCAGACGCCTaGGCCCTGGCTGCCTTGCTA +
Preference number: 4 (lower is better)
Translates to: WSALRWDTVWPGQAEQPLPHSDA*ALAALL
Trigger: TAGCAAGGCAGCCAGGGCCCAGGCGTCTGAGTGAGG...GAGGGGTTGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457500.6
CDS-3UTR TCA 90 bp AGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCGCTTCACGGCCTCGCTaGTCTTGCTCATGGCGCCTT +
Preference number: 4 (lower is better)
Translates to: SEGGPHSDGTQYGQARRSASRPR*SCSWRL
Trigger: AAGGCGCCATGAGCAAGATCAGCGAGGCCGTGAAGC...GCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000468746.5
CDS-3UTR TCA 90 bp GAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCAGTTCCAGGTGCCAATaGCGAGGACCACGCCCAGTG +
Preference number: 4 (lower is better)
Translates to: EPVRVVRTPMGHSMARPGSSRCQ*RGPRPV
Trigger: CACTGGGCGTGGTCCTCGTCATTGGCACCTGGAACT...GCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR TCA 90 bp CCAGGAGAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGGGGCTTGAGGACCACTaGGTTCCCTGCAGCGATGGC +
Preference number: 4 (lower is better)
Translates to: PGEPVRVVRTPMGHSMARGLEDH*VPCSDG
Trigger: GCCATCGCTGCAGGGAACTCAGTGGTCCTCAAGCCC...CCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTCTCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR TCA 90 bp GGAGAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGGCTTGAGGACCACTaGGTTCCCTGCAGCGATGGC +
Preference number: 4 (lower is better)
Translates to: GEPVRVVRTPMGHSMARPGLEDH*VPCSDG
Trigger: GCCATCGCTGCAGGGAACTCAGTGGTCCTCAAGCCC...TGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR TCA 90 bp TGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAACCCCTCTCAGCTCCGAGGGCTTaGGGACCACTGAGTTCCCTG +
Preference number: 4 (lower is better)
Translates to: WSALRWDTVWPGQAEQPLSAPRA*GPLSSL
Trigger: CAGGGAACTCAGTGGTCCTCAAGCCCTCGGAGCTGA...GAGGGGTTGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR TCA 90 bp GAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCTCAGCTCCGAGGGCTTaGGGACCACTGAGTTCCCTG +
Preference number: 4 (lower is better)
Translates to: EPVRVVRTPMGHSMARPGSAPRA*GPLSSL
Trigger: CAGGGAACTCAGTGGTCCTCAAGCCCTCGGAGCTGA...GCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR TCA 90 bp GTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAGGTCGAACCTCTCCTTaGGCAGCTCCGTGGTCTCAG +
Preference number: 4 (lower is better)
Translates to: VRVVRTPMGHSMARPGGAGRTSP*AAPWSQ
Trigger: CTGAGACCACGGAGCTGCTCAAGGAGAGGTTCGACC...TGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR TCA 90 bp AGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCGGTCGAACCTCTCCTTaGGCAGCTCCGTGGTCTCAG +
Preference number: 4 (lower is better)
Translates to: SEGGPHSDGTQYGQARRSGRTSP*AAPWSQ
Trigger: CTGAGACCACGGAGCTGCTCAAGGAGAGGTTCGACC...GCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR TCA 90 bp GGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAACCCCTCCAGGCAAGAGCGGCGGTaGGAGAAAGTCTCGAAGCTC +
Preference number: 4 (lower is better)
Translates to: GPHSDGTQYGQARRSNPSRQERR*EKVSKL
Trigger: GAGCTTCGAGACTTTCTCTCACCGCCGCTCTTGCCT...GGAGGGGTTGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR TCA 90 bp GGAGAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGAGACTTGGAATGGTaGGGCCTGGGCCCATGTGGG +
Preference number: 4 (lower is better)
Translates to: GEPVRVVRTPMGHSMARPGDLEW*GLGPCG
Trigger: CCCACATGGGCCCAGGCCTCACCATTCCAAGTCTCC...TGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR TCA 90 bp CCAGGAGAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGGGAGACTTGGAATGGTaGGGCCTGGGCCCATGTGGG +
Preference number: 4 (lower is better)
Translates to: PGEPVRVVRTPMGHSMARGDLEW*GLGPCG
Trigger: CCCACATGGGCCCAGGCCTCACCATTCCAAGTCTCC...CCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTCTCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR TCA 90 bp GCCAGGAGAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGGAGACTTGGAATGGTaGGGCCTGGGCCCATGTGGG +
Preference number: 4 (lower is better)
Translates to: ARRASEGGPHSDGTQYGQGDLEW*GLGPCG
Trigger: CCCACATGGGCCCAGGCCTCACCATTCCAAGTCTCC...CTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTCTCCTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR TCA 90 bp ATGGGACACAGTATGGCCAGGCCAGGCGGAGCAACCCCTCCTCAGTGCTGGGTCGGAGACTTGGAATGGTaGGGCCTGGGCCCATGTGGG +
Preference number: 4 (lower is better)
Translates to: MGHSMARPGGATPPQCWVGDLEW*GLGPCG
Trigger: CCCACATGGGCCCAGGCCTCACCATTCCAAGTCTCC...GACCCAGCACTGAGGAGGGGTTGCTCCGCCTGGCCTGGCCATACTGTGTCCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468746.5
CDS-3UTR GCA 90 bp GCCAGGAGAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGTGCAGCGCCTCCAGCTaGTGGATCCGGAACTGCAGC +
Preference number: 4 (lower is better)
Translates to: ARRASEGGPHSDGTQYGQCSASS*WIRNCS
Trigger: GCTGCAGTTCCGGATCCAGCAGCTGGAGGCGCTGCA...CTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTCTCCTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
CDS-3UTR GCA 90 bp CAGTATGGCCAGGCCAGGCGGAGCAACCCCTCCTCAGTGCTGGGTCATCTTGGCTGCAGCGCCTCCAGCTaGTGGATCCGGAACTGCAGC +
Preference number: 4 (lower is better)
Translates to: QYGQARRSNPSSVLGHLGCSASS*WIRNCS
Trigger: GCTGCAGTTCCGGATCCAGCAGCTGGAGGCGCTGCA...GCCAAGATGACCCAGCACTGAGGAGGGGTTGCTCCGCCTGGCCTGGCCATACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468746.5
CDS-3UTR GCA 90 bp GCCAGGAGAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGATTCTTGTGCAGGTCTaGGGCCAGCGCGCCCACCAG +
Preference number: 4 (lower is better)
Translates to: ARRASEGGPHSDGTQYGQILVQV*GQRAHQ
Trigger: CTGGTGGGCGCGCTGGCCGCAGACCTGCACAAGAAT...CTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTCTCCTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
CDS-3UTR GCA 90 bp GGAGAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAATTCTTGTGCAGGTCTaGGGCCAGCGCGCCCACCAG +
Preference number: 4 (lower is better)
Translates to: GEPVRVVRTPMGHSMARPILVQV*GQRAHQ
Trigger: CTGGTGGGCGCGCTGGCCGCAGACCTGCACAAGAAT...TGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
CDS-3UTR GCA 90 bp AGGCCAGGCGGAGCAACCCCTCCTCAGTGCTGGGTCATCTTGGCCGGGCTCGGGTTCCATTCATTCTTGTaGAGGTCTGCGGCCAGCGCG +
Preference number: 4 (lower is better)
Translates to: RPGGATPPQCWVILAGLGFHSFL*RSAASA
Trigger: CGCGCTGGCCGCAGACCTGCACAAGAATGAATGGAA...CCCGAGCCCGGCCAAGATGACCCAGCACTGAGGAGGGGTTGCTCCGCCTGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468746.5
CDS-3UTR GCA 90 bp GAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCTCCCCACCCCCGTGCTaGCCGTGTACAGGATATGGT +
Preference number: 4 (lower is better)
Translates to: EPVRVVRTPMGHSMARPGSPPPC*PCTGYG
Trigger: ACCATATCCTGTACACGGGCAGCACGGGGGTGGGGA...GCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR GCA 90 bp TGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAACCCCTCTCCCCACCCCCGTGCTaGCCGTGTACAGGATATGGT +
Preference number: 4 (lower is better)
Translates to: WSALRWDTVWPGQAEQPLSPPPC*PCTGYG
Trigger: ACCATATCCTGTACACGGGCAGCACGGGGGTGGGGA...GAGGGGTTGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR GCA 90 bp GGAGAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCATGGCGGCATCCCCGGTaGCCCCATAAGCCACCTTCT +
Preference number: 4 (lower is better)
Translates to: GEPVRVVRTPMGHSMARPWRHPR*PHKPPS
Trigger: AGAAGGTGGCTTATGGGGGCACCGGGGATGCCGCCA...TGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225740.11
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR GCA 90 bp AGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCCCGAAGATCTCCTCTTaGATCACCGGGGACTGGGGG +
Preference number: 4 (lower is better)
Translates to: SEGGPHSDGTQYGQARRSPKISS*ITGDWG
Trigger: CCCCCAGTCCCCGGTGATGCAAGAGGAGATCTTCGG...GCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225740.11
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR GCA 90 bp GAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCCCGAAGATCTCCTCTTaGATCACCGGGGACTGGGGG +
Preference number: 4 (lower is better)
Translates to: EPVRVVRTPMGHSMARPGPKISS*ITGDWG
Trigger: CCCCCAGTCCCCGGTGATGCAAGAGGAGATCTTCGG...GCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225740.11
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR GCA 90 bp GGAGAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGCAACCCCTCCTCAGTaGTGGGTCATCTTGGCCGGG +
Preference number: 4 (lower is better)
Translates to: GEPVRVVRTPMGHSMARPATPPQ*WVILAG
Trigger: CCCGGCCAAGATGACCCAGCACTGAGGAGGGGTTGC...TGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR GCA 90 bp GTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAACACCCCCAGAGCTCTaGACACGCAGTCAGCCACTC +
Preference number: 4 (lower is better)
Translates to: VRVVRTPMGHSMARPGGATPPEL*TRSQPL
Trigger: GAGTGGCTGACTGCGTGTGCAGAGCTCTGGGGGTGT...TGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444455.5
CDS-3UTR CCA 90 bp CCAGGAGAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGAGCGCCTCCAGCTGCTaGATCCGGAACTGCAGCGGA +
Preference number: 4 (lower is better)
Translates to: PGEPVRVVRTPMGHSMARSASSC*IRNCSG
Trigger: TCCGCTGCAGTTCCGGATCCAGCAGCTGGAGGCGCT...CCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTCTCCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
CDS-3UTR CCA 90 bp GCCAGGAGAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGAGCGCCTCCAGCTGCTaGATCCGGAACTGCAGCGGA +
Preference number: 4 (lower is better)
Translates to: ARRASEGGPHSDGTQYGQSASSC*IRNCSG
Trigger: TCCGCTGCAGTTCCGGATCCAGCAGCTGGAGGCGCT...CTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTCTCCTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
CDS-3UTR CCA 90 bp TCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAACCCCTCCTCAGTGCTGAGCGCCTCCAGCTGCTaGATCCGGAACTGCAGCGGA +
Preference number: 4 (lower is better)
Translates to: SDGTQYGQARRSNPSSVLSASSC*IRNCSG
Trigger: TCCGCTGCAGTTCCGGATCCAGCAGCTGGAGGCGCT...CAGCACTGAGGAGGGGTTGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468746.5
CDS-3UTR CCA 90 bp CACAGTATGGCCAGGCCAGGCGGAGCAACCCCTCCTCAGTGCTGGGTCATCTTGTCCTGCTCCTGCTCCTaGATCAGGCGCTGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: HSMARPGGATPPQCWVILSCSCS*IRRCSA
Trigger: GGCGCTGCAGCGCCTGATCCAGGAGCAGGAGCAGGA...CAAGATGACCCAGCACTGAGGAGGGGTTGCTCCGCCTGGCCTGGCCATACTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468746.5
CDS-3UTR CCA 90 bp GAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGAGGACCACGCCCAGTaGCTCCGAGTGGATGTAGAG +
Preference number: 4 (lower is better)
Translates to: EPVRVVRTPMGHSMARPGEDHAQ*LRVDVE
Trigger: CTCTACATCCACTCGGAGCCACTGGGCGTGGTCCTC...GCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CCA 90 bp TGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAACCCCTCGAGGACCACGCCCAGTaGCTCCGAGTGGATGTAGAG +
Preference number: 4 (lower is better)
Translates to: WSALRWDTVWPGQAEQPLEDHAQ*LRVDVE
Trigger: CTCTACATCCACTCGGAGCCACTGGGCGTGGTCCTC...GAGGGGTTGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CCA 90 bp CCAGGAGAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGGCGCCCACCATGGGCTaGATGGTGAGGTTGAAGGGG +
Preference number: 4 (lower is better)
Translates to: PGEPVRVVRTPMGHSMARAPTMG*MVRLKG
Trigger: CCCCTTCAACCTCACCATCCAGCCCATGGTGGGCGC...CCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTCTCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CCA 90 bp ACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAACCCCTCCTCAGTGCGCGCCCACCATGGGCTaGATGGTGAGGTTGAAGGGG +
Preference number: 4 (lower is better)
Translates to: TPMGHSMARPGGATPPQCAPTMG*MVRLKG
Trigger: CCCCTTCAACCTCACCATCCAGCCCATGGTGGGCGC...GCACTGAGGAGGGGTTGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468746.5
CDS-3UTR CCA 90 bp GCCAGGAGAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGAGTTCCCTGCAGCGATaGCGCCCACCATGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: ARRASEGGPHSDGTQYGQSSLQR*RPPWAG
Trigger: TCCAGCCCATGGTGGGCGCCATCGCTGCAGGGAACT...CTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTCTCCTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CCA 90 bp GCCAGGCCAGGCGGAGCAACCCCTCCTCAGTGCTGGGTCATCTTGGCCGGGCTCGGGGCCACGCAGGTCTaGCCACTGTTCATGAATTTC +
Preference number: 4 (lower is better)
Translates to: ARPGGATPPQCWVILAGLGATQV*PLFMNF
Trigger: GAAATTCATGAACAGTGGCCAGACCTGCGTGGCCCC...GAGCCCGGCCAAGATGACCCAGCACTGAGGAGGGGTTGCTCCGCCTGGCCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468746.5
CDS-3UTR CCA 90 bp GGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAACCCCTCCAGGCCCATCACCCTCTaGAAGTGCCGGGCACTAATG +
Preference number: 4 (lower is better)
Translates to: GPHSDGTQYGQARRSNPSRPITL*KCRALM
Trigger: CATTAGTGCCCGGCACTTCCAGAGGGTGATGGGCCT...GGAGGGGTTGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225740.11
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CCA 90 bp GCCAGGAGAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGTGCGCACGCACACGATaGGCAGCACAGGCCCGAAGA +
Preference number: 4 (lower is better)
Translates to: ARRASEGGPHSDGTQYGQCARTR*AAQARR
Trigger: TCTTCGGGCCTGTGCTGCCCATCGTGTGCGTGCGCA...CTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTCTCCTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CCA 90 bp CCAGGAGAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGTGCGCACGCACACGATaGGCAGCACAGGCCCGAAGA +
Preference number: 4 (lower is better)
Translates to: PGEPVRVVRTPMGHSMARCARTR*AAQARR
Trigger: TCTTCGGGCCTGTGCTGCCCATCGTGTGCGTGCGCA...CCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTCTCCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CCA 90 bp GGAGAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCATGCGCACGCACACGATaGGCAGCACAGGCCCGAAGA +
Preference number: 4 (lower is better)
Translates to: GEPVRVVRTPMGHSMARPCARTR*AAQARR
Trigger: TCTTCGGGCCTGTGCTGCCCATCGTGTGCGTGCGCA...TGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CCA 90 bp GTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCACGATGGGACACAGTATaGCCAGGCCAGGCGGAGCAA +
Preference number: 4 (lower is better)
Translates to: VRVVRTPMGHSMARPGGARWDTV*PGQAEQ
Trigger: TTGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCG...TGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CCA 90 bp GAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCCGATGGGACACAGTATaGCCAGGCCAGGCGGAGCAA +
Preference number: 4 (lower is better)
Translates to: EPVRVVRTPMGHSMARPGRWDTV*PGQAEQ
Trigger: TTGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCG...GCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CCA 90 bp AGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCCGATGGGACACAGTATaGCCAGGCCAGGCGGAGCAA +
Preference number: 4 (lower is better)
Translates to: SEGGPHSDGTQYGQARRSRWDTV*PGQAEQ
Trigger: TTGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCG...GCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CCA 90 bp ACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAACCCCTCCTCAGTGCTGGAATGGTGAGGCCTaGGCCCATGTGGGAGTGGGG +
Preference number: 4 (lower is better)
Translates to: TPMGHSMARPGGATPPQCWNGEA*AHVGVG
Trigger: CCCCACTCCCACATGGGCCCAGGCCTCACCATTCCA...GCACTGAGGAGGGGTTGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468746.5
CDS-3UTR CCA 90 bp GCCAGGAGAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGTGGAATGGTGAGGCCTaGGCCCATGTGGGAGTGGGG +
Preference number: 4 (lower is better)
Translates to: ARRASEGGPHSDGTQYGQWNGEA*AHVGVG
Trigger: CCCCACTCCCACATGGGCCCAGGCCTCACCATTCCA...CTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTCTCCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CCA 90 bp GGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAACCCCGGTAACTGGGGCTCCTaGAACGGCAAGAGCCAAGAG +
Preference number: 4 (lower is better)
Translates to: GGPHSDGTQYGQARRSNPGNWGS*NGKSQE
Trigger: CTCTTGGCTCTTGCCGTTCCAGGAGCCCCAGTTACC...GGGGTTGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395555.7
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CCA 90 bp GGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAACCCCTCCGGTAACTGGGGCTCCTaGAACGGCAAGAGCCAAGAG +
Preference number: 4 (lower is better)
Translates to: GPHSDGTQYGQARRSNPSGNWGS*NGKSQE
Trigger: CTCTTGGCTCTTGCCGTTCCAGGAGCCCCAGTTACC...GGAGGGGTTGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395555.7
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CCA 90 bp GCCAGGAGAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCTCTCCCGGTAACTaGGGCTCCTGGAACGGCAAG +
Preference number: 4 (lower is better)
Translates to: ARRASEGGPHSDGTQYGQASPGN*GSWNGK
Trigger: CTTGCCGTTCCAGGAGCCCCAGTTACCGGGAGAGGC...CTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTCTCCTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395555.7
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CCA 90 bp CCAGGAGAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGGCCTCTCCCGGTAACTaGGGCTCCTGGAACGGCAAG +
Preference number: 4 (lower is better)
Translates to: PGEPVRVVRTPMGHSMARASPGN*GSWNGK
Trigger: CTTGCCGTTCCAGGAGCCCCAGTTACCGGGAGAGGC...CCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTCTCCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395555.7
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CCA 90 bp GGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAACCCCCTCTCCAGATCAGATTaGAGGGGCGCAGTCCGCGAT +
Preference number: 4 (lower is better)
Translates to: GGPHSDGTQYGQARRSNPLSRSD*RGAVRD
Trigger: ATCGCGGACTGCGCCCCTCCAATCTGATCTGGAGAG...GGGGTTGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444455.5
CDS-3UTR CCA 90 bp TCTAGAAAGGGGTGGAGACTTGGAATGGTGAGGCCTGGGCCCATGTGGGAGTGGGCTGCTGGGGGCTCTTaGCAGCGTGCTCGCGGCAGG +
Preference number: 4 (lower is better)
Translates to: SRKGWRLGMVRPGPMWEWAAGGS*QRARGR
Trigger: CCTGCCGCGAGCACGCTGCCAAGAGCCCCCAGCAGC...CCACTCCCACATGGGCCCAGGCCTCACCATTCCAAGTCTCCACCCCTTTCTAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457500.6
CDS-3UTR CCA 90 bp GGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAACCCCCGGCCTTGGGGAAAATaGCCTTTCCGCTGGAAGGTC +
Preference number: 4 (lower is better)
Translates to: GGPHSDGTQYGQARRSNPRPWGK*PFRWKV
Trigger: GACCTTCCAGCGGAAAGGCCATTTTCCCCAAGGCCG...GGGGTTGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000457500.6
CDS-3UTR CCA 90 bp CCAGGAGAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCCTGGGCTCGGCCTTaGGGAAAATGGCCTTTCCGC +
Preference number: 4 (lower is better)
Translates to: PGEPVRVVRTPMGHSMARPWARP*GKWPFR
Trigger: GCGGAAAGGCCATTTTCCCCAAGGCCGAGCCCAGGG...CCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTCTCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457500.6
CDS-3UTR CCA 90 bp AGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCCTTGCTCATGGCGCCTaGGGACAGAGAGCACCTGCA +
Preference number: 4 (lower is better)
Translates to: SEGGPHSDGTQYGQARRSLAHGA*GQRAPA
Trigger: TGCAGGTGCTCTCTGTCCCCAGGCGCCATGAGCAAG...GCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457500.6
CDS-3UTR TCA 90 bp ATGGGACACAGTATGGCCAGGCCAGGCGGAGCAACCCCTCCTCAGTGCTGGGTCGCTTCACGGCCTCGCTaGTCTTGCTCATGGCGCCTT +
Preference number: 4 (lower is better)
Translates to: MGHSMARPGGATPPQCWVASRPR*SCSWRL
Trigger: AAGGCGCCATGAGCAAGATCAGCGAGGCCGTGAAGC...GACCCAGCACTGAGGAGGGGTTGCTCCGCCTGGCCTGGCCATACTGTGTCCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468746.5
CDS-3UTR TCA 90 bp CCAGGAGAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGTCAGCTCCGAGGGCTTaGGGACCACTGAGTTCCCTG +
Preference number: 4 (lower is better)
Translates to: PGEPVRVVRTPMGHSMARSAPRA*GPLSSL
Trigger: CAGGGAACTCAGTGGTCCTCAAGCCCTCGGAGCTGA...CCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTCTCCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR TCA 90 bp CAGTATGGCCAGGCCAGGCGGAGCAACCCCTCCTCAGTGCTGGGTCATCTTGGCTCAGCTCCGAGGGCTTaGGGACCACTGAGTTCCCTG +
Preference number: 4 (lower is better)
Translates to: QYGQARRSNPSSVLGHLGSAPRA*GPLSSL
Trigger: CAGGGAACTCAGTGGTCCTCAAGCCCTCGGAGCTGA...GCCAAGATGACCCAGCACTGAGGAGGGGTTGCTCCGCCTGGCCTGGCCATACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468746.5
CDS-3UTR TCA 90 bp GGAGAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGTCGAACCTCTCCTTaGGCAGCTCCGTGGTCTCAG +
Preference number: 4 (lower is better)
Translates to: GEPVRVVRTPMGHSMARPGRTSP*AAPWSQ
Trigger: CTGAGACCACGGAGCTGCTCAAGGAGAGGTTCGACC...TGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR TCA 90 bp CCAGGAGAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGGGTCGAACCTCTCCTTaGGCAGCTCCGTGGTCTCAG +
Preference number: 4 (lower is better)
Translates to: PGEPVRVVRTPMGHSMARGRTSP*AAPWSQ
Trigger: CTGAGACCACGGAGCTGCTCAAGGAGAGGTTCGACC...CCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTCTCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR TCA 90 bp GGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAACCCCTCTGGCCACTGTTCATaGATTTCCCCCAGGCGATGC +
Preference number: 4 (lower is better)
Translates to: GGPHSDGTQYGQARRSNPSGHCS*ISPRRC
Trigger: GCATCGCCTGGGGGAAATTCATGAACAGTGGCCAGA...GGGGTTGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR TCA 90 bp TGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAACCCCTCAGGCAAGAGCGGCGGTaGGAGAAAGTCTCGAAGCTC +
Preference number: 4 (lower is better)
Translates to: WSALRWDTVWPGQAEQPLRQERR*EKVSKL
Trigger: GAGCTTCGAGACTTTCTCTCACCGCCGCTCTTGCCT...GAGGGGTTGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR GCA 90 bp GGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAACCCCTCCTTCCATTCATTCTTGTaGAGGTCTGCGGCCAGCGCG +
Preference number: 4 (lower is better)
Translates to: GPHSDGTQYGQARRSNPSFHSFL*RSAASA
Trigger: CGCGCTGGCCGCAGACCTGCACAAGAATGAATGGAA...GGAGGGGTTGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
CDS-3UTR GCA 90 bp CCAGGAGAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGTCCCCACCCCCGTGCTaGCCGTGTACAGGATATGGT +
Preference number: 4 (lower is better)
Translates to: PGEPVRVVRTPMGHSMARSPPPC*PCTGYG
Trigger: ACCATATCCTGTACACGGGCAGCACGGGGGTGGGGA...CCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTCTCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR GCA 90 bp TGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAACCCCTCTCTTCCCCACCCCCGTaGTGCCCGTGTACAGGATAT +
Preference number: 4 (lower is better)
Translates to: WSALRWDTVWPGQAEQPLSSPPP*CPCTGY
Trigger: ATATCCTGTACACGGGCAGCACGGGGGTGGGGAAGA...GAGGGGTTGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR GCA 90 bp CCAGGAGAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCGAAGATCTCCTCTTaGATCACCGGGGACTGGGGG +
Preference number: 4 (lower is better)
Translates to: PGEPVRVVRTPMGHSMARPKISS*ITGDWG
Trigger: CCCCCAGTCCCCGGTGATGCAAGAGGAGATCTTCGG...CCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTCTCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225740.11
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR GCA 90 bp GCCAGGAGAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGCCGAAGATCTCCTCTTaGATCACCGGGGACTGGGGG +
Preference number: 4 (lower is better)
Translates to: ARRASEGGPHSDGTQYGQPKISS*ITGDWG
Trigger: CCCCCAGTCCCCGGTGATGCAAGAGGAGATCTTCGG...CTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTCTCCTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225740.11
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR GCA 90 bp CAGTATGGCCAGGCCAGGCGGAGCAACCCCTCCTCAGTGCTGGGTCATCTTGGCCCGAAGATCTCCTCTTaGATCACCGGGGACTGGGGG +
Preference number: 4 (lower is better)
Translates to: QYGQARRSNPSSVLGHLGPKISS*ITGDWG
Trigger: CCCCCAGTCCCCGGTGATGCAAGAGGAGATCTTCGG...GCCAAGATGACCCAGCACTGAGGAGGGGTTGCTCCGCCTGGCCTGGCCATACTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468746.5
CDS-3UTR GCA 90 bp TCTAGAAAGGGGTGGAGACTTGGAATGGTGAGGCCTGGGCCCATGTGGGAGTGGGGGCTGGGCTGGGGCTaGAGGAGCGATTCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: SRKGWRLGMVRPGPMWEWGLGWG*RSDSPR
Trigger: CCTGGGAGAATCGCTCCTGCAGCCCCAGCCCAGCCC...CCACTCCCACATGGGCCCAGGCCTCACCATTCCAAGTCTCCACCCCTTTCTAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CCA 90 bp GGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAACCCCTCCTTGTCCAGGTACTaGGGGATGATGGTAGCCAGC +
Preference number: 4 (lower is better)
Translates to: GGPHSDGTQYGQARRSNPSLSRY*GMMVAS
Trigger: GCTGGCTACCATCATCCCCCAGTACCTGGACAAGGA...GGGGTTGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CCA 90 bp GAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCAGGCCCATCACCCTCTaGAAGTGCCGGGCACTAATG +
Preference number: 4 (lower is better)
Translates to: EPVRVVRTPMGHSMARPGRPITL*KCRALM
Trigger: CATTAGTGCCCGGCACTTCCAGAGGGTGATGGGCCT...GCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225740.11
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CCA 90 bp ACACAGTATGGCCAGGCCAGGCGGAGCAACCCCTCCTCAGTGCTGGGTCATCTTTGCATCACCGGGGACTaGGGGTCCACGTCCGTGAGG +
Preference number: 4 (lower is better)
Translates to: TQYGQARRSNPSSVLGHLCITGD*GSTSVR
Trigger: CCTCACGGACGTGGACCCCCAGTCCCCGGTGATGCA...AAGATGACCCAGCACTGAGGAGGGGTTGCTCCGCCTGGCCTGGCCATACTGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000468746.5
CDS-3UTR CCA 90 bp GCCAGGAGAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGCGATGGGACACAGTATaGCCAGGCCAGGCGGAGCAA +
Preference number: 4 (lower is better)
Translates to: ARRASEGGPHSDGTQYGQRWDTV*PGQAEQ
Trigger: TTGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCG...CTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTCTCCTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CCA 90 bp AGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAAAGGGGTGGAGACTTaGAATGGTGAGGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: SEGGPHSDGTQYGQARRSKGVET*NGEAWA
Trigger: GGCCCAGGCCTCACCATTCCAAGTCTCCACCCCTTT...GCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CCA 90 bp GGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAACCCCCGTCCATTGAGCCCTTaGAGTTCCTGCCCAGGAAGT +
Preference number: 4 (lower is better)
Translates to: GGPHSDGTQYGQARRSNPRPLSP*SSCPGS
Trigger: ACTTCCTGGGCAGGAACTCCAAGGGCTCAATGGACG...GGGGTTGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494157.6
CDS-3UTR TCA 90 bp GGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAACCCCCAGGGACACCCCCATTaGTTACTGGGTACAGATCCT +
Preference number: 4 (lower is better)
Translates to: GGPHSDGTQYGQARRSNPQGHPH*LLGTDP
Trigger: AGGATCTGTACCCAGTAATCAATGGGGGTGTCCCTG...GGGGTTGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR TCA 90 bp TGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAACCCCTCTCTGGCCACTGTTCATaGATTTCCCCCAGGCGATGC +
Preference number: 4 (lower is better)
Translates to: WSALRWDTVWPGQAEQPLSGHCS*ISPRRC
Trigger: GCATCGCCTGGGGGAAATTCATGAACAGTGGCCAGA...GAGGGGTTGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR TCA 90 bp CCAGGAGAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGAGGCAAGAGCGGCGGTaGGAGAAAGTCTCGAAGCTC +
Preference number: 4 (lower is better)
Translates to: PGEPVRVVRTPMGHSMARRQERR*EKVSKL
Trigger: GAGCTTCGAGACTTTCTCTCACCGCCGCTCTTGCCT...CCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTCTCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR TCA 90 bp GCCAGGAGAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGAGGCAAGAGCGGCGGTaGGAGAAAGTCTCGAAGCTC +
Preference number: 4 (lower is better)
Translates to: ARRASEGGPHSDGTQYGQRQERR*EKVSKL
Trigger: GAGCTTCGAGACTTTCTCTCACCGCCGCTCTTGCCT...CTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTCTCCTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR GCA 90 bp TCTAGAAAGGGGTGGAGACTTGGAATGGTGAGGCCTGGGCCCATGTGGGAGTGGTGCTGGATCCGGAACTaGAGCGGACGGGTCCTGCCC +
Preference number: 4 (lower is better)
Translates to: SRKGWRLGMVRPGPMWEWCWIRN*SGRVLP
Trigger: GGGCAGGACCCGTCCGCTGCAGTTCCGGATCCAGCA...CCACTCCCACATGGGCCCAGGCCTCACCATTCCAAGTCTCCACCCCTTTCTAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
CDS-3UTR GCA 90 bp TCTAGAAAGGGGTGGAGACTTGGAATGGTGAGGCCTGGGCCCATGTGGGAGTGGTCCTGGATCAGGCGCTaGAGCGCCTCCAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: SRKGWRLGMVRPGPMWEWSWIRR*SASSCW
Trigger: CCAGCAGCTGGAGGCGCTGCAGCGCCTGATCCAGGA...CCACTCCCACATGGGCCCAGGCCTCACCATTCCAAGTCTCCACCCCTTTCTAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
CDS-3UTR GCA 90 bp GTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCATTCCATTCATTCTTGTaGAGGTCTGCGGCCAGCGCG +
Preference number: 4 (lower is better)
Translates to: VRVVRTPMGHSMARPGGAFHSFL*RSAASA
Trigger: CGCGCTGGCCGCAGACCTGCACAAGAATGAATGGAA...TGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
CDS-3UTR GCA 90 bp CCAGGAGAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGTCTTCCCCACCCCCGTaGTGCCCGTGTACAGGATAT +
Preference number: 4 (lower is better)
Translates to: PGEPVRVVRTPMGHSMARSSPPP*CPCTGY
Trigger: ATATCCTGTACACGGGCAGCACGGGGGTGGGGAAGA...CCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTCTCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR GCA 90 bp GGAGAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCATCTTCCCCACCCCCGTaGTGCCCGTGTACAGGATAT +
Preference number: 4 (lower is better)
Translates to: GEPVRVVRTPMGHSMARPSSPPP*CPCTGY
Trigger: ATATCCTGTACACGGGCAGCACGGGGGTGGGGAAGA...TGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR GCA 90 bp GGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAACCCCCATGGTAGGATCCCATaGCGCTGTTCCCTTGTCGTT +
Preference number: 4 (lower is better)
Translates to: GGPHSDGTQYGQARRSNPHGRIP*RCSLVV
Trigger: AACGACAAGGGAACAGCGGCATGGGATCCTACCATG...GGGGTTGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000468746.5
CDS-3UTR CCA 90 bp TCTAGAAAGGGGTGGAGACTTGGAATGGTGAGGCCTGGGCCCATGTGGGAGTGGTCCTGCTCCTGCTCCTaGATCAGGCGCTGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: SRKGWRLGMVRPGPMWEWSCSCS*IRRCSA
Trigger: GGCGCTGCAGCGCCTGATCCAGGAGCAGGAGCAGGA...CCACTCCCACATGGGCCCAGGCCTCACCATTCCAAGTCTCCACCCCTTTCTAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
CDS-3UTR CCA 90 bp GTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCATCCTTGTCCAGGTACTaGGGGATGATGGTAGCCAGC +
Preference number: 4 (lower is better)
Translates to: VRVVRTPMGHSMARPGGASLSRY*GMMVAS
Trigger: GCTGGCTACCATCATCCCCCAGTACCTGGACAAGGA...TGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CCA 90 bp TATGGCCAGGCCAGGCGGAGCAACCCCTCCTCAGTGCTGGGTCATCTTGGCCGGTCCTTGTCCAGGTACTaGGGGATGATGGTAGCCAGC +
Preference number: 4 (lower is better)
Translates to: YGQARRSNPSSVLGHLGRSLSRY*GMMVAS
Trigger: GCTGGCTACCATCATCCCCCAGTACCTGGACAAGGA...CCGGCCAAGATGACCCAGCACTGAGGAGGGGTTGCTCCGCCTGGCCTGGCCATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468746.5
CDS-3UTR CCA 90 bp AGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCGGGGCCACGCAGGTCTaGCCACTGTTCATGAATTTC +
Preference number: 4 (lower is better)
Translates to: SEGGPHSDGTQYGQARRSGATQV*PLFMNF
Trigger: GAAATTCATGAACAGTGGCCAGACCTGCGTGGCCCC...GCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CCA 90 bp GAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGGGCCACGCAGGTCTaGCCACTGTTCATGAATTTC +
Preference number: 4 (lower is better)
Translates to: EPVRVVRTPMGHSMARPGGATQV*PLFMNF
Trigger: GAAATTCATGAACAGTGGCCAGACCTGCGTGGCCCC...GCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CCA 90 bp GTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAGGGGCCACGCAGGTCTaGCCACTGTTCATGAATTTC +
Preference number: 4 (lower is better)
Translates to: VRVVRTPMGHSMARPGGAGATQV*PLFMNF
Trigger: GAAATTCATGAACAGTGGCCAGACCTGCGTGGCCCC...TGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CCA 90 bp GCCAGGAGAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGAGGCCCATCACCCTCTaGAAGTGCCGGGCACTAATG +
Preference number: 4 (lower is better)
Translates to: ARRASEGGPHSDGTQYGQRPITL*KCRALM
Trigger: CATTAGTGCCCGGCACTTCCAGAGGGTGATGGGCCT...CTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTCTCCTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225740.11
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CCA 90 bp CCAGGAGAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGAGGCCCATCACCCTCTaGAAGTGCCGGGCACTAATG +
Preference number: 4 (lower is better)
Translates to: PGEPVRVVRTPMGHSMARRPITL*KCRALM
Trigger: CATTAGTGCCCGGCACTTCCAGAGGGTGATGGGCCT...CCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTCTCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225740.11
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CCA 90 bp TCTAGAAAGGGGTGGAGACTTGGAATGGTGAGGCCTGGGCCCATGTGGGAGTGGTGCATCACCGGGGACTaGGGGTCCACGTCCGTGAGG +
Preference number: 4 (lower is better)
Translates to: SRKGWRLGMVRPGPMWEWCITGD*GSTSVR
Trigger: CCTCACGGACGTGGACCCCCAGTCCCCGGTGATGCA...CCACTCCCACATGGGCCCAGGCCTCACCATTCCAAGTCTCCACCCCTTTCTAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000225740.11
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CCA 90 bp ACACAGTATGGCCAGGCCAGGCGGAGCAACCCCTCCTCAGTGCTGGGTCATCTTTGCGCACGCACACGATaGGCAGCACAGGCCCGAAGA +
Preference number: 4 (lower is better)
Translates to: TQYGQARRSNPSSVLGHLCARTR*AAQARR
Trigger: TCTTCGGGCCTGTGCTGCCCATCGTGTGCGTGCGCA...AAGATGACCCAGCACTGAGGAGGGGTTGCTCCGCCTGGCCTGGCCATACTGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468746.5
CDS-3UTR CCA 90 bp GCCAGGAGAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGAAAGGGGTGGAGACTTaGAATGGTGAGGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: ARRASEGGPHSDGTQYGQKGVET*NGEAWA
Trigger: GGCCCAGGCCTCACCATTCCAAGTCTCCACCCCTTT...CTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTCTCCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CCA 90 bp GGAGAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAAAAGGGGTGGAGACTTaGAATGGTGAGGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: GEPVRVVRTPMGHSMARPKGVET*NGEAWA
Trigger: GGCCCAGGCCTCACCATTCCAAGTCTCCACCCCTTT...TGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CCA 90 bp CCAGGAGAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGAAAGGGGTGGAGACTTaGAATGGTGAGGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: PGEPVRVVRTPMGHSMARKGVET*NGEAWA
Trigger: GGCCCAGGCCTCACCATTCCAAGTCTCCACCCCTTT...CCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTCTCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CCA 90 bp CCAGGAGAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGGGTAACTGGGGCTCCTaGAACGGCAAGAGCCAAGAG +
Preference number: 4 (lower is better)
Translates to: PGEPVRVVRTPMGHSMARGNWGS*NGKSQE
Trigger: CTCTTGGCTCTTGCCGTTCCAGGAGCCCCAGTTACC...CCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTCTCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395555.7
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CCA 90 bp GCCAGGAGAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGAGGAAGGGACTTCCCTaGGCTCGGCCTTGGGGAAAA +
Preference number: 4 (lower is better)
Translates to: ARRASEGGPHSDGTQYGQRKGLP*ARPWGK
Trigger: TTTTCCCCAAGGCCGAGCCCAGGGAAGTCCCTTCCT...CTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTCTCCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457500.6
CDS-3UTR TCA 90 bp TCTAGAAAGGGGTGGAGACTTGGAATGGTGAGGCCTGGGCCCATGTGGGAGTGGGGGCTTGAGGACCACTaGGTTCCCTGCAGCGATGGC +
Preference number: 4 (lower is better)
Translates to: SRKGWRLGMVRPGPMWEWGLEDH*VPCSDG
Trigger: GCCATCGCTGCAGGGAACTCAGTGGTCCTCAAGCCC...CCACTCCCACATGGGCCCAGGCCTCACCATTCCAAGTCTCCACCCCTTTCTAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR TCA 90 bp TGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAACCCCTCCAGGGACACCCCCATTaGTTACTGGGTACAGATCCT +
Preference number: 4 (lower is better)
Translates to: WSALRWDTVWPGQAEQPLQGHPH*LLGTDP
Trigger: AGGATCTGTACCCAGTAATCAATGGGGGTGTCCCTG...GAGGGGTTGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR TCA 90 bp CACAGTATGGCCAGGCCAGGCGGAGCAACCCCTCCTCAGTGCTGGGTCATCTTGAGGCAAGAGCGGCGGTaGGAGAAAGTCTCGAAGCTC +
Preference number: 4 (lower is better)
Translates to: HSMARPGGATPPQCWVILRQERR*EKVSKL
Trigger: GAGCTTCGAGACTTTCTCTCACCGCCGCTCTTGCCT...CAAGATGACCCAGCACTGAGGAGGGGTTGCTCCGCCTGGCCTGGCCATACTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468746.5
CDS-3UTR TCA 90 bp TCTAGAAAGGGGTGGAGACTTGGAATGGTGAGGCCTGGGCCCATGTGGGAGTGGGGAGACTTGGAATGGTaGGGCCTGGGCCCATGTGGG +
Preference number: 4 (lower is better)
Translates to: SRKGWRLGMVRPGPMWEWGDLEW*GLGPCG
Trigger: CCCACATGGGCCCAGGCCTCACCATTCCAAGTCTCC...CCACTCCCACATGGGCCCAGGCCTCACCATTCCAAGTCTCCACCCCTTTCTAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR GCA 90 bp TCTAGAAAGGGGTGGAGACTTGGAATGGTGAGGCCTGGGCCCATGTGGGAGTGGATTCTTGTGCAGGTCTaGGGCCAGCGCGCCCACCAG +
Preference number: 4 (lower is better)
Translates to: SRKGWRLGMVRPGPMWEWILVQV*GQRAHQ
Trigger: CTGGTGGGCGCGCTGGCCGCAGACCTGCACAAGAAT...CCACTCCCACATGGGCCCAGGCCTCACCATTCCAAGTCTCCACCCCTTTCTAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
CDS-3UTR GCA 90 bp GCCAGGAGAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGTTCCATTCATTCTTGTaGAGGTCTGCGGCCAGCGCG +
Preference number: 4 (lower is better)
Translates to: ARRASEGGPHSDGTQYGQFHSFL*RSAASA
Trigger: CGCGCTGGCCGCAGACCTGCACAAGAATGAATGGAA...CTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTCTCCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
CDS-3UTR GCA 90 bp GGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAACCCCTCCTCTCGAAGCTCTTCTTaGCATGGTAGGATCCCATGC +
Preference number: 4 (lower is better)
Translates to: GPHSDGTQYGQARRSNPSSRSSS*HGRIPC
Trigger: GCATGGGATCCTACCATGGCAAGAAGAGCTTCGAGA...GGAGGGGTTGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR GCA 90 bp TATTGGTCTAGAAAGGGGTGGAGACTTGGAATGGTGAGGCCTGGGCCCATGTGGGGCACGAGCGCGCCCTaGCTCCCACCCTGCCTGAAT +
Preference number: 4 (lower is better)
Translates to: YWSRKGWRLGMVRPGPMWGTSAP*LPPCLN
Trigger: ATTCAGGCAGGGTGGGAGGCAGGGCGCGCTCGTGCC...CCACATGGGCCCAGGCCTCACCATTCCAAGTCTCCACCCCTTTCTAGACCAATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457500.6
CDS-3UTR CCA 90 bp GGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAACCCCTCCCACTCAGGGAGCTTCTaGATCATGTACTCGATCTCC +
Preference number: 4 (lower is better)
Translates to: GPHSDGTQYGQARRSNPSHSGSF*IMYSIS
Trigger: GGAGATCGAGTACATGATCCAGAAGCTCCCTGAGTG...GGAGGGGTTGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CCA 90 bp TCTAGAAAGGGGTGGAGACTTGGAATGGTGAGGCCTGGGCCCATGTGGGAGTGGAGTTCCCTGCAGCGATaGCGCCCACCATGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: SRKGWRLGMVRPGPMWEWSSLQR*RPPWAG
Trigger: TCCAGCCCATGGTGGGCGCCATCGCTGCAGGGAACT...CCACTCCCACATGGGCCCAGGCCTCACCATTCCAAGTCTCCACCCCTTTCTAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CCA 90 bp GGAGAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCATCCTTGTCCAGGTACTaGGGGATGATGGTAGCCAGC +
Preference number: 4 (lower is better)
Translates to: GEPVRVVRTPMGHSMARPSLSRY*GMMVAS
Trigger: GCTGGCTACCATCATCCCCCAGTACCTGGACAAGGA...TGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CCA 90 bp GTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCACCCGTGTACAGGATATaGTCGAACCTCTCCTTGAGC +
Preference number: 4 (lower is better)
Translates to: VRVVRTPMGHSMARPGGAPVYRI*SNLSLS
Trigger: GCTCAAGGAGAGGTTCGACCATATCCTGTACACGGG...TGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CCA 90 bp TGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAACCCCTCCCCGTGTACAGGATATaGTCGAACCTCTCCTTGAGC +
Preference number: 4 (lower is better)
Translates to: WSALRWDTVWPGQAEQPLPVYRI*SNLSLS
Trigger: GCTCAAGGAGAGGTTCGACCATATCCTGTACACGGG...GAGGGGTTGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CCA 90 bp GGAGAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGGGCCACGCAGGTCTaGCCACTGTTCATGAATTTC +
Preference number: 4 (lower is better)
Translates to: GEPVRVVRTPMGHSMARPGATQV*PLFMNF
Trigger: GAAATTCATGAACAGTGGCCAGACCTGCGTGGCCCC...TGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CCA 90 bp TATTGGTCTAGAAAGGGGTGGAGACTTGGAATGGTGAGGCCTGGGCCCATGTGGGGGCTATGTAGCGAGTaGCGGCATCCCCGGTGCCCC +
Preference number: 4 (lower is better)
Translates to: YWSRKGWRLGMVRPGPMWGLCSE*RHPRCP
Trigger: GGGGCACCGGGGATGCCGCCACTCGCTACATAGCCC...CCACATGGGCCCAGGCCTCACCATTCCAAGTCTCCACCCCTTTCTAGACCAATA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000225740.11
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CCA 90 bp GGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAACCCCTCACCTTGTCGTTGCTaGAGAACATGTAGAGGGCCA +
Preference number: 4 (lower is better)
Translates to: GGPHSDGTQYGQARRSNPSPCRC*RTCRGP
Trigger: TGGCCCTCTACATGTTCTCCAGCAACGACAAGGTGA...GGGGTTGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000494157.6
CDS-3UTR CCA 90 bp GAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGAGTGCAAGGTGATGTaGACGATGACATCGTTGGCC +
Preference number: 4 (lower is better)
Translates to: EPVRVVRTPMGHSMARPGECKVM*TMTSLA
Trigger: GGCCAACGATGTCATCGTCCACATCACCTTGCACTC...GCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000494157.6
CDS-3UTR CCA 90 bp AGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCGAGTGCAAGGTGATGTaGACGATGACATCGTTGGCC +
Preference number: 4 (lower is better)
Translates to: SEGGPHSDGTQYGQARRSECKVM*TMTSLA
Trigger: GGCCAACGATGTCATCGTCCACATCACCTTGCACTC...GCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000494157.6
CDS-3UTR CCA 90 bp GGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAACCCCTGGTCTAGAAAGGGGTaGAGACTTGGAATGGTGAGG +
Preference number: 4 (lower is better)
Translates to: GGPHSDGTQYGQARRSNPWSRKG*RLGMVR
Trigger: CCTCACCATTCCAAGTCTCCACCCCTTTCTAGACCA...GGGGTTGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CCA 90 bp GGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAACCCCAAATGGCCTTTCCGCTaGAAGGTCCACTTTCTGCCT +
Preference number: 4 (lower is better)
Translates to: GGPHSDGTQYGQARRSNPKWPFR*KVHFLP
Trigger: AGGCAGAAAGTGGACCTTCCAGCGGAAAGGCCATTT...GGGGTTGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457500.6
CDS-3UTR CCA 90 bp TATTGGTCTAGAAAGGGGTGGAGACTTGGAATGGTGAGGCCTGGGCCCATGTGGGAGAGCACCTGCAGCTaGCTGAGGGGCACGAGCGCG +
Preference number: 4 (lower is better)
Translates to: YWSRKGWRLGMVRPGPMWESTCS*LRGTSA
Trigger: CGCGCTCGTGCCCCTCAGCCAGCTGCAGGTGCTCTC...CCACATGGGCCCAGGCCTCACCATTCCAAGTCTCCACCCCTTTCTAGACCAATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457500.6
CDS-3UTR TCA 90 bp TCTAGAAAGGGGTGGAGACTTGGAATGGTGAGGCCTGGGCCCATGTGGGAGTGGTCAGCTCCGAGGGCTTaGGGACCACTGAGTTCCCTG +
Preference number: 4 (lower is better)
Translates to: SRKGWRLGMVRPGPMWEWSAPRA*GPLSSL
Trigger: CAGGGAACTCAGTGGTCCTCAAGCCCTCGGAGCTGA...CCACTCCCACATGGGCCCAGGCCTCACCATTCCAAGTCTCCACCCCTTTCTAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR TCA 90 bp GCCAGGAGAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGCAGGGACACCCCCATTaGTTACTGGGTACAGATCCT +
Preference number: 4 (lower is better)
Translates to: ARRASEGGPHSDGTQYGQQGHPH*LLGTDP
Trigger: AGGATCTGTACCCAGTAATCAATGGGGGTGTCCCTG...CTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTCTCCTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR TCA 90 bp GGAGAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCACAGGGACACCCCCATTaGTTACTGGGTACAGATCCT +
Preference number: 4 (lower is better)
Translates to: GEPVRVVRTPMGHSMARPQGHPH*LLGTDP
Trigger: AGGATCTGTACCCAGTAATCAATGGGGGTGTCCCTG...TGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR TCA 90 bp TCTAGAAAGGGGTGGAGACTTGGAATGGTGAGGCCTGGGCCCATGTGGGAGTGGGGTCGAACCTCTCCTTaGGCAGCTCCGTGGTCTCAG +
Preference number: 4 (lower is better)
Translates to: SRKGWRLGMVRPGPMWEWGRTSP*AAPWSQ
Trigger: CTGAGACCACGGAGCTGCTCAAGGAGAGGTTCGACC...CCACTCCCACATGGGCCCAGGCCTCACCATTCCAAGTCTCCACCCCTTTCTAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR TCA 90 bp GGAGAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGCTTGCTTGCAAAGCTaGTGGCACAATCCCAGACCA +
Preference number: 4 (lower is better)
Translates to: GEPVRVVRTPMGHSMARPACLQS*WHNPRP
Trigger: TGGTCTGGGATTGTGCCATCAGCTTTGCAAGCAAGC...TGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444455.5
CDS-3UTR GCA 90 bp TATTGGTCTAGAAAGGGGTGGAGACTTGGAATGGTGAGGCCTGGGCCCATGTGGTGCTGGATCCGGAACTaGAGCGGACGGGTCCTGCCC +
Preference number: 4 (lower is better)
Translates to: YWSRKGWRLGMVRPGPMWCWIRN*SGRVLP
Trigger: GGGCAGGACCCGTCCGCTGCAGTTCCGGATCCAGCA...CCACATGGGCCCAGGCCTCACCATTCCAAGTCTCCACCCCTTTCTAGACCAATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
CDS-3UTR GCA 90 bp TATTGGTCTAGAAAGGGGTGGAGACTTGGAATGGTGAGGCCTGGGCCCATGTGGTCCTGGATCAGGCGCTaGAGCGCCTCCAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: YWSRKGWRLGMVRPGPMWSWIRR*SASSCW
Trigger: CCAGCAGCTGGAGGCGCTGCAGCGCCTGATCCAGGA...CCACATGGGCCCAGGCCTCACCATTCCAAGTCTCCACCCCTTTCTAGACCAATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
CDS-3UTR GCA 90 bp TGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAACCCCTCTCTCGAAGCTCTTCTTaGCATGGTAGGATCCCATGC +
Preference number: 4 (lower is better)
Translates to: WSALRWDTVWPGQAEQPLSRSSS*HGRIPC
Trigger: GCATGGGATCCTACCATGGCAAGAAGAGCTTCGAGA...GAGGGGTTGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR GCA 90 bp GTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCATCTCGAAGCTCTTCTTaGCATGGTAGGATCCCATGC +
Preference number: 4 (lower is better)
Translates to: VRVVRTPMGHSMARPGGASRSSS*HGRIPC
Trigger: GCATGGGATCCTACCATGGCAAGAAGAGCTTCGAGA...TGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR GCA 90 bp AGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCTCTCGAAGCTCTTCTTaGCATGGTAGGATCCCATGC +
Preference number: 4 (lower is better)
Translates to: SEGGPHSDGTQYGQARRSSRSSS*HGRIPC
Trigger: GCATGGGATCCTACCATGGCAAGAAGAGCTTCGAGA...GCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR GCA 90 bp TGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAACCCCTCCTCATGGCGCTTGCTTaGAAAGCTGATGGCACAATC +
Preference number: 4 (lower is better)
Translates to: WSALRWDTVWPGQAEQPLLMALA*KADGTI
Trigger: GATTGTGCCATCAGCTTTGCAAGCAAGCGCCATGAG...GAGGGGTTGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444455.5
CDS-3UTR CCA 90 bp TATTGGTCTAGAAAGGGGTGGAGACTTGGAATGGTGAGGCCTGGGCCCATGTGGTCCTGCTCCTGCTCCTaGATCAGGCGCTGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: YWSRKGWRLGMVRPGPMWSCSCS*IRRCSA
Trigger: GGCGCTGCAGCGCCTGATCCAGGAGCAGGAGCAGGA...CCACATGGGCCCAGGCCTCACCATTCCAAGTCTCCACCCCTTTCTAGACCAATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
CDS-3UTR CCA 90 bp AGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCCACTCAGGGAGCTTCTaGATCATGTACTCGATCTCC +
Preference number: 4 (lower is better)
Translates to: SEGGPHSDGTQYGQARRSHSGSF*IMYSIS
Trigger: GGAGATCGAGTACATGATCCAGAAGCTCCCTGAGTG...GCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CCA 90 bp TCTAGAAAGGGGTGGAGACTTGGAATGGTGAGGCCTGGGCCCATGTGGGAGTGGGAGGACCACGCCCAGTaGCTCCGAGTGGATGTAGAG +
Preference number: 4 (lower is better)
Translates to: SRKGWRLGMVRPGPMWEWEDHAQ*LRVDVE
Trigger: CTCTACATCCACTCGGAGCCACTGGGCGTGGTCCTC...CCACTCCCACATGGGCCCAGGCCTCACCATTCCAAGTCTCCACCCCTTTCTAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CCA 90 bp GGAGAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCACCCGTGTACAGGATATaGTCGAACCTCTCCTTGAGC +
Preference number: 4 (lower is better)
Translates to: GEPVRVVRTPMGHSMARPPVYRI*SNLSLS
Trigger: GCTCAAGGAGAGGTTCGACCATATCCTGTACACGGG...TGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CCA 90 bp AGTATGGCCAGGCCAGGCGGAGCAACCCCTCCTCAGTGCTGGGTCATCTTGGCCCCCGTGTACAGGATATaGTCGAACCTCTCCTTGAGC +
Preference number: 4 (lower is better)
Translates to: SMARPGGATPPQCWVILAPVYRI*SNLSLS
Trigger: GCTCAAGGAGAGGTTCGACCATATCCTGTACACGGG...GGCCAAGATGACCCAGCACTGAGGAGGGGTTGCTCCGCCTGGCCTGGCCATACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468746.5
CDS-3UTR CCA 90 bp GGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAACCCCTCCAGCTTCTCCACAATTTaGTTCTGGATCGAGGGGTCA +
Preference number: 4 (lower is better)
Translates to: GPHSDGTQYGQARRSNPSSFSTI*FWIEGS
Trigger: TGACCCCTCGATCCAGAACCAAATTGTGGAGAAGCT...GGAGGGGTTGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CCA 90 bp ACACAGTATGGCCAGGCCAGGCGGAGCAACCCCTCCTCAGTGCTGGGTCATCTTAGGCCCATCACCCTCTaGAAGTGCCGGGCACTAATG +
Preference number: 4 (lower is better)
Translates to: TQYGQARRSNPSSVLGHLRPITL*KCRALM
Trigger: CATTAGTGCCCGGCACTTCCAGAGGGTGATGGGCCT...AAGATGACCCAGCACTGAGGAGGGGTTGCTCCGCCTGGCCTGGCCATACTGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468746.5
CDS-3UTR CCA 90 bp TATTGGTCTAGAAAGGGGTGGAGACTTGGAATGGTGAGGCCTGGGCCCATGTGGTGCATCACCGGGGACTaGGGGTCCACGTCCGTGAGG +
Preference number: 4 (lower is better)
Translates to: YWSRKGWRLGMVRPGPMWCITGD*GSTSVR
Trigger: CCTCACGGACGTGGACCCCCAGTCCCCGGTGATGCA...CCACATGGGCCCAGGCCTCACCATTCCAAGTCTCCACCCCTTTCTAGACCAATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000225740.11
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CCA 90 bp TGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAACCCCTCTCACCTTGTCGTTGCTaGAGAACATGTAGAGGGCCA +
Preference number: 4 (lower is better)
Translates to: WSALRWDTVWPGQAEQPLSPCRC*RTCRGP
Trigger: TGGCCCTCTACATGTTCTCCAGCAACGACAAGGTGA...GAGGGGTTGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000494157.6
CDS-3UTR CCA 90 bp GAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCTCACCTTGTCGTTGCTaGAGAACATGTAGAGGGCCA +
Preference number: 4 (lower is better)
Translates to: EPVRVVRTPMGHSMARPGSPCRC*RTCRGP
Trigger: TGGCCCTCTACATGTTCTCCAGCAACGACAAGGTGA...GCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000494157.6
CDS-3UTR CCA 90 bp GGAGAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGAGTGCAAGGTGATGTaGACGATGACATCGTTGGCC +
Preference number: 4 (lower is better)
Translates to: GEPVRVVRTPMGHSMARPECKVM*TMTSLA
Trigger: GGCCAACGATGTCATCGTCCACATCACCTTGCACTC...TGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000494157.6
CDS-3UTR CCA 90 bp CCAGGAGAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGGAGTGCAAGGTGATGTaGACGATGACATCGTTGGCC +
Preference number: 4 (lower is better)
Translates to: PGEPVRVVRTPMGHSMARECKVM*TMTSLA
Trigger: GGCCAACGATGTCATCGTCCACATCACCTTGCACTC...CCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTCTCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000494157.6
CDS-3UTR TCA 90 bp GGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAACCCCTCCGTAGAACTCTTTCAGTaGCTTCTTGAGCTTCTCCAC +
Preference number: 4 (lower is better)
Translates to: GPHSDGTQYGQARRSNPSVELFQ*LLELLH
Trigger: GTGGAGAAGCTCAAGAAGTCACTGAAAGAGTTCTAC...GGAGGGGTTGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225740.11
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR GCA 90 bp TATTGGTCTAGAAAGGGGTGGAGACTTGGAATGGTGAGGCCTGGGCCCATGTGGTGCAGCGCCTCCAGCTaGTGGATCCGGAACTGCAGC +
Preference number: 4 (lower is better)
Translates to: YWSRKGWRLGMVRPGPMWCSASS*WIRNCS
Trigger: GCTGCAGTTCCGGATCCAGCAGCTGGAGGCGCTGCA...CCACATGGGCCCAGGCCTCACCATTCCAAGTCTCCACCCCTTTCTAGACCAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
CDS-3UTR GCA 90 bp TCTAGAAAGGGGTGGAGACTTGGAATGGTGAGGCCTGGGCCCATGTGGGAGTGGTCTTCCCCACCCCCGTaGTGCCCGTGTACAGGATAT +
Preference number: 4 (lower is better)
Translates to: SRKGWRLGMVRPGPMWEWSSPPP*CPCTGY
Trigger: ATATCCTGTACACGGGCAGCACGGGGGTGGGGAAGA...CCACTCCCACATGGGCCCAGGCCTCACCATTCCAAGTCTCCACCCCTTTCTAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR GCA 90 bp GTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAATCACCCTCTGGAAGTaGCGGGCACTAATGATTCTT +
Preference number: 4 (lower is better)
Translates to: VRVVRTPMGHSMARPGGAITLWK*RALMIL
Trigger: AAGAATCATTAGTGCCCGGCACTTCCAGAGGGTGAT...TGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225740.11
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR GCA 90 bp TGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAACCCCTCATCACCCTCTGGAAGTaGCGGGCACTAATGATTCTT +
Preference number: 4 (lower is better)
Translates to: WSALRWDTVWPGQAEQPLITLWK*RALMIL
Trigger: AAGAATCATTAGTGCCCGGCACTTCCAGAGGGTGAT...GAGGGGTTGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225740.11
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CCA 90 bp TATTGGTCTAGAAAGGGGTGGAGACTTGGAATGGTGAGGCCTGGGCCCATGTGGAGCGCCTCCAGCTGCTaGATCCGGAACTGCAGCGGA +
Preference number: 4 (lower is better)
Translates to: YWSRKGWRLGMVRPGPMWSASSC*IRNCSG
Trigger: TCCGCTGCAGTTCCGGATCCAGCAGCTGGAGGCGCT...CCACATGGGCCCAGGCCTCACCATTCCAAGTCTCCACCCCTTTCTAGACCAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
CDS-3UTR CCA 90 bp GCCAGGAGAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGCACTCAGGGAGCTTCTaGATCATGTACTCGATCTCC +
Preference number: 4 (lower is better)
Translates to: ARRASEGGPHSDGTQYGQHSGSF*IMYSIS
Trigger: GGAGATCGAGTACATGATCCAGAAGCTCCCTGAGTG...CTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTCTCCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CCA 90 bp TCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAACCCCTCCTCAGTGCTGCACTCAGGGAGCTTCTaGATCATGTACTCGATCTCC +
Preference number: 4 (lower is better)
Translates to: SDGTQYGQARRSNPSSVLHSGSF*IMYSIS
Trigger: GGAGATCGAGTACATGATCCAGAAGCTCCCTGAGTG...CAGCACTGAGGAGGGGTTGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468746.5
CDS-3UTR CCA 90 bp GAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCACCCCCATTGATTACTaGGTACAGATCCTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: EPVRVVRTPMGHSMARPGTPIDY*VQILVQ
Trigger: CTGGACAAGGATCTGTACCCAGTAATCAATGGGGGT...GCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CCA 90 bp TGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAACCCCTCACCCCCATTGATTACTaGGTACAGATCCTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: WSALRWDTVWPGQAEQPLTPIDY*VQILVQ
Trigger: CTGGACAAGGATCTGTACCCAGTAATCAATGGGGGT...GAGGGGTTGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CCA 90 bp AGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCACCCCCATTGATTACTaGGTACAGATCCTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: SEGGPHSDGTQYGQARRSTPIDY*VQILVQ
Trigger: CTGGACAAGGATCTGTACCCAGTAATCAATGGGGGT...GCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CCA 90 bp GAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCAGCTTCTCCACAATTTaGTTCTGGATCGAGGGGTCA +
Preference number: 4 (lower is better)
Translates to: EPVRVVRTPMGHSMARPGSFSTI*FWIEGS
Trigger: TGACCCCTCGATCCAGAACCAAATTGTGGAGAAGCT...GCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CCA 90 bp GCCAGGAGAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGTCACCTTGTCGTTGCTaGAGAACATGTAGAGGGCCA +
Preference number: 4 (lower is better)
Translates to: ARRASEGGPHSDGTQYGQSPCRC*RTCRGP
Trigger: TGGCCCTCTACATGTTCTCCAGCAACGACAAGGTGA...CTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTCTCCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000494157.6
CDS-3UTR CCA 90 bp TATTGGTCTAGAAAGGGGTGGAGACTTGGAATGGTGAGGCCTGGGCCCATGTGGACCCCTCCTCAGTGCTaGGTCATCTTGGCCGGGCTC +
Preference number: 4 (lower is better)
Translates to: YWSRKGWRLGMVRPGPMWTPPQC*VILAGL
Trigger: GAGCCCGGCCAAGATGACCCAGCACTGAGGAGGGGT...CCACATGGGCCCAGGCCTCACCATTCCAAGTCTCCACCCCTTTCTAGACCAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CCA 90 bp TCTAGAAAGGGGTGGAGACTTGGAATGGTGAGGCCTGGGCCCATGTGGGAGTGGAAAGGGGTGGAGACTTaGAATGGTGAGGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: SRKGWRLGMVRPGPMWEWKGVET*NGEAWA
Trigger: GGCCCAGGCCTCACCATTCCAAGTCTCCACCCCTTT...CCACTCCCACATGGGCCCAGGCCTCACCATTCCAAGTCTCCACCCCTTTCTAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CCA 90 bp GCCAGGAGAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGTGGTCTAGAAAGGGGTaGAGACTTGGAATGGTGAGG +
Preference number: 4 (lower is better)
Translates to: ARRASEGGPHSDGTQYGQWSRKG*RLGMVR
Trigger: CCTCACCATTCCAAGTCTCCACCCCTTTCTAGACCA...CTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTCTCCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CCA 90 bp GGAGAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCATGGTCTAGAAAGGGGTaGAGACTTGGAATGGTGAGG +
Preference number: 4 (lower is better)
Translates to: GEPVRVVRTPMGHSMARPWSRKG*RLGMVR
Trigger: CCTCACCATTCCAAGTCTCCACCCCTTTCTAGACCA...TGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR TCA 90 bp TATTGGTCTAGAAAGGGGTGGAGACTTGGAATGGTGAGGCCTGGGCCCATGTGGTCAGCTCCGAGGGCTTaGGGACCACTGAGTTCCCTG +
Preference number: 4 (lower is better)
Translates to: YWSRKGWRLGMVRPGPMWSAPRA*GPLSSL
Trigger: CAGGGAACTCAGTGGTCCTCAAGCCCTCGGAGCTGA...CCACATGGGCCCAGGCCTCACCATTCCAAGTCTCCACCCCTTTCTAGACCAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR TCA 90 bp TCTAGAAAGGGGTGGAGACTTGGAATGGTGAGGCCTGGGCCCATGTGGGAGTGGTCTGGCCACTGTTCATaGATTTCCCCCAGGCGATGC +
Preference number: 4 (lower is better)
Translates to: SRKGWRLGMVRPGPMWEWSGHCS*ISPRRC
Trigger: GCATCGCCTGGGGGAAATTCATGAACAGTGGCCAGA...CCACTCCCACATGGGCCCAGGCCTCACCATTCCAAGTCTCCACCCCTTTCTAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR TCA 90 bp GGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAACCCCTCCCTTTCAGTGACTTCTTaGGCTTCTCCACAATTTGGT +
Preference number: 4 (lower is better)
Translates to: GPHSDGTQYGQARRSNPSLSVTS*ASPQFG
Trigger: ACCAAATTGTGGAGAAGCTCAAGAAGTCACTGAAAG...GGAGGGGTTGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR TCA 90 bp GGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAACCCCCTTTCAGTGACTTCTTaGGCTTCTCCACAATTTGGT +
Preference number: 4 (lower is better)
Translates to: GGPHSDGTQYGQARRSNPLSVTS*ASPQFG
Trigger: ACCAAATTGTGGAGAAGCTCAAGAAGTCACTGAAAG...GGGGTTGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR GCA 90 bp TATTGGTCTAGAAAGGGGTGGAGACTTGGAATGGTGAGGCCTGGGCCCATGTGGTCCCCACCCCCGTGCTaGCCGTGTACAGGATATGGT +
Preference number: 4 (lower is better)
Translates to: YWSRKGWRLGMVRPGPMWSPPPC*PCTGYG
Trigger: ACCATATCCTGTACACGGGCAGCACGGGGGTGGGGA...CCACATGGGCCCAGGCCTCACCATTCCAAGTCTCCACCCCTTTCTAGACCAATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR GCA 90 bp CCAGGAGAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGATCACCCTCTGGAAGTaGCGGGCACTAATGATTCTT +
Preference number: 4 (lower is better)
Translates to: PGEPVRVVRTPMGHSMARITLWK*RALMIL
Trigger: AAGAATCATTAGTGCCCGGCACTTCCAGAGGGTGAT...CCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTCTCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225740.11
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR GCA 90 bp GGAGAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAATCACCCTCTGGAAGTaGCGGGCACTAATGATTCTT +
Preference number: 4 (lower is better)
Translates to: GEPVRVVRTPMGHSMARPITLWK*RALMIL
Trigger: AAGAATCATTAGTGCCCGGCACTTCCAGAGGGTGAT...TGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225740.11
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CCA 90 bp CCAGGAGAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGACCCCCATTGATTACTaGGTACAGATCCTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: PGEPVRVVRTPMGHSMARTPIDY*VQILVQ
Trigger: CTGGACAAGGATCTGTACCCAGTAATCAATGGGGGT...CCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTCTCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CCA 90 bp CCAGGAGAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGAGCTTCTCCACAATTTaGTTCTGGATCGAGGGGTCA +
Preference number: 4 (lower is better)
Translates to: PGEPVRVVRTPMGHSMARSFSTI*FWIEGS
Trigger: TGACCCCTCGATCCAGAACCAAATTGTGGAGAAGCT...CCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTCTCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CCA 90 bp CACAGTATGGCCAGGCCAGGCGGAGCAACCCCTCCTCAGTGCTGGGTCATCTTGTGGTCTAGAAAGGGGTaGAGACTTGGAATGGTGAGG +
Preference number: 4 (lower is better)
Translates to: HSMARPGGATPPQCWVILWSRKG*RLGMVR
Trigger: CCTCACCATTCCAAGTCTCCACCCCTTTCTAGACCA...CAAGATGACCCAGCACTGAGGAGGGGTTGCTCCGCCTGGCCTGGCCATACTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468746.5
CDS-3UTR TCA 90 bp TCTAGAAAGGGGTGGAGACTTGGAATGGTGAGGCCTGGGCCCATGTGGGAGTGGCAGGGACACCCCCATTaGTTACTGGGTACAGATCCT +
Preference number: 4 (lower is better)
Translates to: SRKGWRLGMVRPGPMWEWQGHPH*LLGTDP
Trigger: AGGATCTGTACCCAGTAATCAATGGGGGTGTCCCTG...CCACTCCCACATGGGCCCAGGCCTCACCATTCCAAGTCTCCACCCCTTTCTAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR TCA 90 bp AGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCCTTTCAGTGACTTCTTaGGCTTCTCCACAATTTGGT +
Preference number: 4 (lower is better)
Translates to: SEGGPHSDGTQYGQARRSLSVTS*ASPQFG
Trigger: ACCAAATTGTGGAGAAGCTCAAGAAGTCACTGAAAG...GCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR TCA 90 bp GTATGGCCAGGCCAGGCGGAGCAACCCCTCCTCAGTGCTGGGTCATCTTGGCCGCTTTCAGTGACTTCTTaGGCTTCTCCACAATTTGGT +
Preference number: 4 (lower is better)
Translates to: VWPGQAEQPLLSAGSSWPLSVTS*ASPQFG
Trigger: ACCAAATTGTGGAGAAGCTCAAGAAGTCACTGAAAG...CGGCCAAGATGACCCAGCACTGAGGAGGGGTTGCTCCGCCTGGCCTGGCCATAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468746.5
CDS-3UTR TCA 90 bp GGAGAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGTAGAACTCTTTCAGTaGCTTCTTGAGCTTCTCCAC +
Preference number: 4 (lower is better)
Translates to: GEPVRVVRTPMGHSMARPVELFQ*LLELLH
Trigger: GTGGAGAAGCTCAAGAAGTCACTGAAAGAGTTCTAC...TGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225740.11
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR GCA 90 bp TATTGGTCTAGAAAGGGGTGGAGACTTGGAATGGTGAGGCCTGGGCCCATGTGGTCTTCCCCACCCCCGTaGTGCCCGTGTACAGGATAT +
Preference number: 4 (lower is better)
Translates to: YWSRKGWRLGMVRPGPMWSSPPP*CPCTGY
Trigger: ATATCCTGTACACGGGCAGCACGGGGGTGGGGAAGA...CCACATGGGCCCAGGCCTCACCATTCCAAGTCTCCACCCCTTTCTAGACCAATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR GCA 90 bp TATTGGTCTAGAAAGGGGTGGAGACTTGGAATGGTGAGGCCTGGGCCCATGTGGAGTCCTAAGCCGAACTaGTGCTGGGGGCTCTTGGCA +
Preference number: 4 (lower is better)
Translates to: YWSRKGWRLGMVRPGPMWSPKPN*CWGLLA
Trigger: TGCCAAGAGCCCCCAGCAGCAGTTCGGCTTAGGACT...CCACATGGGCCCAGGCCTCACCATTCCAAGTCTCCACCCCTTTCTAGACCAATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457500.6
CDS-3UTR CCA 90 bp TATTGGTCTAGAAAGGGGTGGAGACTTGGAATGGTGAGGCCTGGGCCCATGTGGAAAGGGGTGGAGACTTaGAATGGTGAGGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: YWSRKGWRLGMVRPGPMWKGVET*NGEAWA
Trigger: GGCCCAGGCCTCACCATTCCAAGTCTCCACCCCTTT...CCACATGGGCCCAGGCCTCACCATTCCAAGTCTCCACCCCTTTCTAGACCAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR TCA 90 bp TATTGGTCTAGAAAGGGGTGGAGACTTGGAATGGTGAGGCCTGGGCCCATGTGGTCTGGCCACTGTTCATaGATTTCCCCCAGGCGATGC +
Preference number: 4 (lower is better)
Translates to: YWSRKGWRLGMVRPGPMWSGHCS*ISPRRC
Trigger: GCATCGCCTGGGGGAAATTCATGAACAGTGGCCAGA...CCACATGGGCCCAGGCCTCACCATTCCAAGTCTCCACCCCTTTCTAGACCAATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR TCA 90 bp GGAGAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCACTTTCAGTGACTTCTTaGGCTTCTCCACAATTTGGT +
Preference number: 4 (lower is better)
Translates to: GEPVRVVRTPMGHSMARPLSVTS*ASPQFG
Trigger: ACCAAATTGTGGAGAAGCTCAAGAAGTCACTGAAAG...TGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR GCA 90 bp TCTAGAAAGGGGTGGAGACTTGGAATGGTGAGGCCTGGGCCCATGTGGGAGTGGTCTCGAAGCTCTTCTTaGCATGGTAGGATCCCATGC +
Preference number: 4 (lower is better)
Translates to: SRKGWRLGMVRPGPMWEWSRSSS*HGRIPC
Trigger: GCATGGGATCCTACCATGGCAAGAAGAGCTTCGAGA...CCACTCCCACATGGGCCCAGGCCTCACCATTCCAAGTCTCCACCCCTTTCTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CCA 90 bp TATTGGTCTAGAAAGGGGTGGAGACTTGGAATGGTGAGGCCTGGGCCCATGTGGTCCTTGTCCAGGTACTaGGGGATGATGGTAGCCAGC +
Preference number: 4 (lower is better)
Translates to: YWSRKGWRLGMVRPGPMWSLSRY*GMMVAS
Trigger: GCTGGCTACCATCATCCCCCAGTACCTGGACAAGGA...CCACATGGGCCCAGGCCTCACCATTCCAAGTCTCCACCCCTTTCTAGACCAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CCA 90 bp ACACAGTATGGCCAGGCCAGGCGGAGCAACCCCTCCTCAGTGCTGGGTCATCTTAGCTTCTCCACAATTTaGTTCTGGATCGAGGGGTCA +
Preference number: 4 (lower is better)
Translates to: TQYGQARRSNPSSVLGHLSFSTI*FWIEGS
Trigger: TGACCCCTCGATCCAGAACCAAATTGTGGAGAAGCT...AAGATGACCCAGCACTGAGGAGGGGTTGCTCCGCCTGGCCTGGCCATACTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468746.5
CDS-3UTR CCA 90 bp TCTAGAAAGGGGTGGAGACTTGGAATGGTGAGGCCTGGGCCCATGTGGGAGTGGTGGTCTAGAAAGGGGTaGAGACTTGGAATGGTGAGG +
Preference number: 4 (lower is better)
Translates to: SRKGWRLGMVRPGPMWEWWSRKG*RLGMVR
Trigger: CCTCACCATTCCAAGTCTCCACCCCTTTCTAGACCA...CCACTCCCACATGGGCCCAGGCCTCACCATTCCAAGTCTCCACCCCTTTCTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CCA 90 bp TCTAGAAAGGGGTGGAGACTTGGAATGGTGAGGCCTGGGCCCATGTGGGAGTGGACCCCCATTGATTACTaGGTACAGATCCTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: SRKGWRLGMVRPGPMWEWTPIDY*VQILVQ
Trigger: CTGGACAAGGATCTGTACCCAGTAATCAATGGGGGT...CCACTCCCACATGGGCCCAGGCCTCACCATTCCAAGTCTCCACCCCTTTCTAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CCA 90 bp TATTGGTCTAGAAAGGGGTGGAGACTTGGAATGGTGAGGCCTGGGCCCATGTGGGAGTGCAAGGTGATGTaGACGATGACATCGTTGGCC +
Preference number: 4 (lower is better)
Translates to: YWSRKGWRLGMVRPGPMWECKVM*TMTSLA
Trigger: GGCCAACGATGTCATCGTCCACATCACCTTGCACTC...CCACATGGGCCCAGGCCTCACCATTCCAAGTCTCCACCCCTTTCTAGACCAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000494157.6
CDS-3UTR TCA 90 bp TCTAGAAAGGGGTGGAGACTTGGAATGGTGAGGCCTGGGCCCATGTGGGAGTGGGTAGAACTCTTTCAGTaGCTTCTTGAGCTTCTCCAC +
Preference number: 4 (lower is better)
Translates to: SRKGWRLGMVRPGPMWEWVELFQ*LLELLH
Trigger: GTGGAGAAGCTCAAGAAGTCACTGAAAGAGTTCTAC...CCACTCCCACATGGGCCCAGGCCTCACCATTCCAAGTCTCCACCCCTTTCTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225740.11
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CCA 90 bp TATTGGTCTAGAAAGGGGTGGAGACTTGGAATGGTGAGGCCTGGGCCCATGTGGCACTCAGGGAGCTTCTaGATCATGTACTCGATCTCC +
Preference number: 4 (lower is better)
Translates to: YWSRKGWRLGMVRPGPMWHSGSF*IMYSIS
Trigger: GGAGATCGAGTACATGATCCAGAAGCTCCCTGAGTG...CCACATGGGCCCAGGCCTCACCATTCCAAGTCTCCACCCCTTTCTAGACCAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CCA 90 bp TATTGGTCTAGAAAGGGGTGGAGACTTGGAATGGTGAGGCCTGGGCCCATGTGGTCACCTTGTCGTTGCTaGAGAACATGTAGAGGGCCA +
Preference number: 4 (lower is better)
Translates to: YWSRKGWRLGMVRPGPMWSPCRC*RTCRGP
Trigger: TGGCCCTCTACATGTTCTCCAGCAACGACAAGGTGA...CCACATGGGCCCAGGCCTCACCATTCCAAGTCTCCACCCCTTTCTAGACCAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000494157.6
CDS-3UTR CCA 90 bp TATTGGTCTAGAAAGGGGTGGAGACTTGGAATGGTGAGGCCTGGGCCCATGTGGTGGTCTAGAAAGGGGTaGAGACTTGGAATGGTGAGG +
Preference number: 4 (lower is better)
Translates to: YWSRKGWRLGMVRPGPMWWSRKG*RLGMVR
Trigger: CCTCACCATTCCAAGTCTCCACCCCTTTCTAGACCA...CCACATGGGCCCAGGCCTCACCATTCCAAGTCTCCACCCCTTTCTAGACCAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CCA 90 bp TATTGGTCTAGAAAGGGGTGGAGACTTGGAATGGTGAGGCCTGGGCCCATGTGGTTCCCTTGTCGTTGCTaGAGAACATGTAGAGGGCCA +
Preference number: 4 (lower is better)
Translates to: YWSRKGWRLGMVRPGPMWFPCRC*RTCRGP
Trigger: TGGCCCTCTACATGTTCTCCAGCAACGACAAGGGAA...CCACATGGGCCCAGGCCTCACCATTCCAAGTCTCCACCCCTTTCTAGACCAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468746.5
CDS-3UTR TCA 90 bp TATTGGTCTAGAAAGGGGTGGAGACTTGGAATGGTGAGGCCTGGGCCCATGTGGGTAGAACTCTTTCAGTaGCTTCTTGAGCTTCTCCAC +
Preference number: 4 (lower is better)
Translates to: YWSRKGWRLGMVRPGPMWVELFQ*LLELLH
Trigger: GTGGAGAAGCTCAAGAAGTCACTGAAAGAGTTCTAC...CCACATGGGCCCAGGCCTCACCATTCCAAGTCTCCACCCCTTTCTAGACCAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225740.11
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS GCA 90 bp TCCTGGATCAGGCGCTGCAGCGCCTCCAGCTGCTGGATCCGGAACTaGAGCGGACGGGTCCTGCCCGAGCTGAAGGCGGCGCGGGCGCGC +
Preference number: 5 (lower is better)
Translates to: SWIRRCSASSCWIRN*SGRVLPELKAARAR
Trigger: GCGCGCCCGCGCCGCCTTCAGCTCGGGCAGGACCCGTCCGCTGCAGTTCCGGATCCAGCAGCTGGAGGCGCTGCAGCGCCTGATCCAGGA
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000426645.2
ENST00000439102.6
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000570414.1
ENST00000573368.5
ENST00000574162.5
ENST00000575103.1
ENST00000575860.1
CDS CCA 90 bp CCCGCCGCAACCCGAGTCCTAAGCCGAACTGCTGCTGGGGGCTCTTaGCAGCGTGCTCGCGGCAGGGCCTTTCCCGGCCTTTTCCGCTCC +
Preference number: 5 (lower is better)
Translates to: PAATRVLSRTAAGGS*QRARGRAFPGLFRS
Trigger: GGAGCGGAAAAGGCCGGGAAAGGCCCTGCCGCGAGCACGCTGCCAAGAGCCCCCAGCAGCAGTTCGGCTTAGGACTCGGGTTGCGGCGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457500.6
CDS-3UTR CAA 90 bp GGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAACCCCTCCTGCTGCTGGGGGCTCTaGGCAGCGTGCTCGCGGCAG +
Preference number: 5 (lower is better)
Translates to: GPHSDGTQYGQARRSNPSCCWGL*AACSRQ
Trigger: CTGCCGCGAGCACGCTGCCAAGAGCCCCCAGCAGCA...GGAGGGGTTGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457500.6
CDS CCA 90 bp GAAGGTGACACCCGCCGCAACCCGAGTCCTAAGCCGAACTGCTGCTaGGGGCTCTTGGCAGCGTGCTCGCGGCAGGGCCTTTCCCGGCCT +
Preference number: 5 (lower is better)
Translates to: EGDTRRNPSPKPNCC*GLLAACSRQGLSRP
Trigger: AGGCCGGGAAAGGCCCTGCCGCGAGCACGCTGCCAAGAGCCCCCAGCAGCAGTTCGGCTTAGGACTCGGGTTGCGGCGGGTGTCACCTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457500.6
CDS TCA 90 bp CGCCCCTCACTCAGACGCCTGGGCCCTGGCTGCCTTGCTAGCCCCTaGGAAGGTGACACCCGCCGCAACCCGAGTCCTAAGCCGAACTGC +
Preference number: 5 (lower is better)
Translates to: RPSLRRLGPGCLASP*EGDTRRNPSPKPNC
Trigger: GCAGTTCGGCTTAGGACTCGGGTTGCGGCGGGTGTCACCTTCTCAGGGGCTAGCAAGGCAGCCAGGGCCCAGGCGTCTGAGTGAGGGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457500.6
CDS-3UTR CAA 90 bp GGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAACCCCACGGCCTCGCTGATCTaGCTCATGGCGCCTGGGGAC +
Preference number: 5 (lower is better)
Translates to: GGPHSDGTQYGQARRSNPTASLI*LMAPGD
Trigger: GTCCCCAGGCGCCATGAGCAAGATCAGCGAGGCCGT...GGGGTTGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457500.6
CDS-3UTR CAA 90 bp GGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAACCCCTGGACGATGACATCGTaGGCCGCCACCCCACCACTG +
Preference number: 5 (lower is better)
Translates to: GGPHSDGTQYGQARRSNPWTMTS*AATPPL
Trigger: CAGTGGTGGGGTGGCGGCCAACGATGTCATCGTCCA...GGGGTTGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000494157.6
CDS-3UTR CAA 90 bp GGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAACCCCTCCTCCCTGGGCTCGGCCTaGGGGAAAATGGCCTTTCCG +
Preference number: 5 (lower is better)
Translates to: GPHSDGTQYGQARRSNPSSLGSA*GKMAFP
Trigger: CGGAAAGGCCATTTTCCCCAAGGCCGAGCCCAGGGA...GGAGGGGTTGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000457500.6
CDS CCA 90 bp TGGTGTCCCTGCTCCGCGGATCCCTGGGACCTCTGCCTCCTGGTTTaGGGGATGGCAGAGCTGCCAGAGGTCCAGGAGGATGCTCCAGAG +
Preference number: 5 (lower is better)
Translates to: WCPCSADPWDLCLLV*GMAELPEVQEDAPE
Trigger: CTCTGGAGCATCCTCCTGGACCTCTGGCAGCTCTGCCATCCCCCAAACCAGGAGGCAGAGGTCCCAGGGATCCGCGGAGCAGGGACACCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570414.1
ENST00000574162.5
CDS CCA 90 bp CACCTTGGTGTCCCTGCTCCGCGGATCCCTGGGACCTCTGCCTCCTaGTTTGGGGGATGGCAGAGCTGCCAGAGGTCCAGGAGGATGCTC +
Preference number: 5 (lower is better)
Translates to: HLGVPAPRIPGTSAS*FGGWQSCQRSRRML
Trigger: GAGCATCCTCCTGGACCTCTGGCAGCTCTGCCATCCCCCAAACCAGGAGGCAGAGGTCCCAGGGATCCGCGGAGCAGGGACACCAAGGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000570414.1
ENST00000574162.5
CDS CCA 90 bp ATGGAGTCTGACGGCCCATCAGGGCCTCTCACTCCACGGCCACCTTaGTGTCCCTGCTCCGCGGATCCCTGGGACCTCTGCCTCCTGGTT +
Preference number: 5 (lower is better)
Translates to: MESDGPSGPLTPRPP*CPCSADPWDLCLLV
Trigger: AACCAGGAGGCAGAGGTCCCAGGGATCCGCGGAGCAGGGACACCAAGGTGGCCGTGGAGTGAGAGGCCCTGATGGGCCGTCAGACTCCAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570414.1
ENST00000574162.5
CDS-3UTR CAA 90 bp GAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCCCCGAAGATCTCCTCTaGCATCACCGGGGACTGGGG +
Preference number: 5 (lower is better)
Translates to: EPVRVVRTPMGHSMARPGPEDLL*HHRGLG
Trigger: CCCCAGTCCCCGGTGATGCAAGAGGAGATCTTCGGG...GCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225740.11
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CAA 90 bp GAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCTGGACGATGACATCGTaGGCCGCCACCCCACCACTG +
Preference number: 5 (lower is better)
Translates to: EPVRVVRTPMGHSMARPGWTMTS*AATPPL
Trigger: CAGTGGTGGGGTGGCGGCCAACGATGTCATCGTCCA...GCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000494157.6
CDS-3UTR CAA 90 bp TGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAACCCCTCTGGACGATGACATCGTaGGCCGCCACCCCACCACTG +
Preference number: 5 (lower is better)
Translates to: WSALRWDTVWPGQAEQPLWTMTS*AATPPL
Trigger: CAGTGGTGGGGTGGCGGCCAACGATGTCATCGTCCA...GAGGGGTTGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000494157.6
CDS-3UTR CAA 90 bp GGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAACCCCACGGCCTCGCTGATCTaGCTCATGGCGCTTGCTTGC +
Preference number: 5 (lower is better)
Translates to: GGPHSDGTQYGQARRSNPTASLI*LMALAC
Trigger: GCAAGCAAGCGCCATGAGCAAGATCAGCGAGGCCGT...GGGGTTGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444455.5
CDS TCA 90 bp ACAAGCACATGTCACGGGGCACACCCAGGAGCACGCACGGGCACATaGCAGAGGGACACACACGGGCACACGCTGGCCAGAGCTGCACCA +
Preference number: 5 (lower is better)
Translates to: TSTCHGAHPGARTGT*QRDTHGHTLARAAP
Trigger: TGGTGCAGCTCTGGCCAGCGTGTGCCCGTGTGTGTCCCTCTGTCATGTGCCCGTGCGTGCTCCTGGGTGTGCCCCGTGACATGTGCTTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479677.6
CDS TCA 90 bp CCCAGGGTACTTCACCAGAGGCTCTGCCCTCCCAAGGACCACACCTaGAGCCTCCCCTCCATTGTGTGTCCTGCAGCGATGGCGCCCACC +
Preference number: 5 (lower is better)
Translates to: PRVLHQRLCPPKDHT*SLPSIVCPAAMAPT
Trigger: GGTGGGCGCCATCGCTGCAGGACACACAATGGAGGGGAGGCTTCAGGTGTGGTCCTTGGGAGGGCAGAGCCTCTGGTGAAGTACCCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485231.1
CDS GCA 90 bp AACCCGAGTCCTAAGCCGAACTGCTGCTGGGGGCTCTTGGCAGCGTaGTCGCGGCAGGGCCTTTCCCGGCCTTTTCCGCTCCCTTACTTG +
Preference number: 5 (lower is better)
Translates to: NPSPKPNCCWGLLAA*SRQGLSRPFPLPYL
Trigger: CAAGTAAGGGAGCGGAAAAGGCCGGGAAAGGCCCTGCCGCGAGCACGCTGCCAAGAGCCCCCAGCAGCAGTTCGGCTTAGGACTCGGGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457500.6
CDS-3UTR CAA 90 bp GGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAACCCCTTGCTCATGGCGCCTTaGACACAGCCTCTCCCGGTA +
Preference number: 5 (lower is better)
Translates to: GGPHSDGTQYGQARRSNPLLMAP*TQPLPV
Trigger: TACCGGGAGAGGCTGTGTCAAAGGCGCCATGAGCAA...GGGGTTGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000468746.5
CDS-3UTR CAA 90 bp GGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAACCCCACGGCCTCGCTGATCTaGCTCATGGCGCCTTTGACA +
Preference number: 5 (lower is better)
Translates to: GGPHSDGTQYGQARRSNPTASLI*LMAPLT
Trigger: TGTCAAAGGCGCCATGAGCAAGATCAGCGAGGCCGT...GGGGTTGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000468746.5
CDS-3UTR CAA 90 bp GGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAACCCCGCGTTCCATTCATTCTaGTGCAGGTCTGCGGCCAGC +
Preference number: 5 (lower is better)
Translates to: GGPHSDGTQYGQARRSNPAFHSF*CRSAAS
Trigger: GCTGGCCGCAGACCTGCACAAGAATGAATGGAACGC...GGGGTTGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
CDS-3UTR CAA 90 bp GAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCCTCAGCTCCGAGGGCTaGAGGACCACTGAGTTCCCT +
Preference number: 5 (lower is better)
Translates to: EPVRVVRTPMGHSMARPGLSSEG*RTTEFP
Trigger: AGGGAACTCAGTGGTCCTCAAGCCCTCGGAGCTGAG...GCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CAA 90 bp GTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCACTCAGCTCCGAGGGCTaGAGGACCACTGAGTTCCCT +
Preference number: 5 (lower is better)
Translates to: VRVVRTPMGHSMARPGGALSSEG*RTTEFP
Trigger: AGGGAACTCAGTGGTCCTCAAGCCCTCGGAGCTGAG...TGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CAA 90 bp GGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAACCCCTGGTCGAACCTCTCCTaGAGCAGCTCCGTGGTCTCA +
Preference number: 5 (lower is better)
Translates to: GGPHSDGTQYGQARRSNPWSNLS*SSSVVS
Trigger: TGAGACCACGGAGCTGCTCAAGGAGAGGTTCGACCA...GGGGTTGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CAA 90 bp GGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAACCCCTCCTGGTCGAACCTCTCCTaGAGCAGCTCCGTGGTCTCA +
Preference number: 5 (lower is better)
Translates to: GPHSDGTQYGQARRSNPSWSNLS*SSSVVS
Trigger: TGAGACCACGGAGCTGCTCAAGGAGAGGTTCGACCA...GGAGGGGTTGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CAA 90 bp GGAGAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCACCCGAAGATCTCCTCTaGCATCACCGGGGACTGGGG +
Preference number: 5 (lower is better)
Translates to: GEPVRVVRTPMGHSMARPPEDLL*HHRGLG
Trigger: CCCCAGTCCCCGGTGATGCAAGAGGAGATCTTCGGG...TGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225740.11
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CAA 90 bp CCAGGAGAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCCGAAGATCTCCTCTaGCATCACCGGGGACTGGGG +
Preference number: 5 (lower is better)
Translates to: PGEPVRVVRTPMGHSMARPEDLL*HHRGLG
Trigger: CCCCAGTCCCCGGTGATGCAAGAGGAGATCTTCGGG...CCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTCTCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225740.11
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CAA 90 bp GGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAACCCCTCCGGCTTCTCACGCTGGTaGATGAACTGGATGGCCTCC +
Preference number: 5 (lower is better)
Translates to: GPHSDGTQYGQARRSNPSGFSRW*MNWMAS
Trigger: GGAGGCCATCCAGTTCATCAACCAGCGTGAGAAGCC...GGAGGGGTTGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CAA 90 bp AGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCCCGTCCATTGAGCCCTaGGAGTTCCTGCCCAGGAAG +
Preference number: 5 (lower is better)
Translates to: SEGGPHSDGTQYGQARRSPSIEP*EFLPRK
Trigger: CTTCCTGGGCAGGAACTCCAAGGGCTCAATGGACGG...GCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494157.6
CDS GCA 90 bp CCTCCTGGTTTGGGGGATGGCAGAGCTGCCAGAGGTCCAGGAGGATaGTCCAGAGATGATGGTCCCAGAGGCAGGGACCCCCTGGAGAGA +
Preference number: 5 (lower is better)
Translates to: PPGLGDGRAARGPGG*SRDDGPRGRDPLER
Trigger: TCTCTCCAGGGGGTCCCTGCCTCTGGGACCATCATCTCTGGAGCATCCTCCTGGACCTCTGGCAGCTCTGCCATCCCCCAAACCAGGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000570414.1
ENST00000574162.5
CDS-3UTR CAA 90 bp TGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAACCCCTCTTGCTCATGGCGCCTTaGACACAGCCTCTCCCGGTA +
Preference number: 5 (lower is better)
Translates to: WSALRWDTVWPGQAEQPLLLMAP*TQPLPV
Trigger: TACCGGGAGAGGCTGTGTCAAAGGCGCCATGAGCAA...GAGGGGTTGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000468746.5
CDS-3UTR CAA 90 bp GGAGAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCACTCAGCTCCGAGGGCTaGAGGACCACTGAGTTCCCT +
Preference number: 5 (lower is better)
Translates to: GEPVRVVRTPMGHSMARPLSSEG*RTTEFP
Trigger: AGGGAACTCAGTGGTCCTCAAGCCCTCGGAGCTGAG...TGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CAA 90 bp GCCAGGAGAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGCTCAGCTCCGAGGGCTaGAGGACCACTGAGTTCCCT +
Preference number: 5 (lower is better)
Translates to: ARRASEGGPHSDGTQYGQLSSEG*RTTEFP
Trigger: AGGGAACTCAGTGGTCCTCAAGCCCTCGGAGCTGAG...CTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTCTCCTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CAA 90 bp GTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCATGGTCGAACCTCTCCTaGAGCAGCTCCGTGGTCTCA +
Preference number: 5 (lower is better)
Translates to: VRVVRTPMGHSMARPGGAWSNLS*SSSVVS
Trigger: TGAGACCACGGAGCTGCTCAAGGAGAGGTTCGACCA...TGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CAA 90 bp GACACAGTATGGCCAGGCCAGGCGGAGCAACCCCTCCTCAGTGCTGGGTCATCTCCCGAAGATCTCCTCTaGCATCACCGGGGACTGGGG +
Preference number: 5 (lower is better)
Translates to: DTVWPGQAEQPLLSAGSSPEDLL*HHRGLG
Trigger: CCCCAGTCCCCGGTGATGCAAGAGGAGATCTTCGGG...AGATGACCCAGCACTGAGGAGGGGTTGCTCCGCCTGGCCTGGCCATACTGTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468746.5
CDS-3UTR CAA 90 bp AGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCGGCTTCTCACGCTGGTaGATGAACTGGATGGCCTCC +
Preference number: 5 (lower is better)
Translates to: SEGGPHSDGTQYGQARRSGFSRW*MNWMAS
Trigger: GGAGGCCATCCAGTTCATCAACCAGCGTGAGAAGCC...GCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CAA 90 bp CCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAACCCCTCCTCAGTGCTGGGGCTTCTCACGCTGGTaGATGAACTGGATGGCCTCC +
Preference number: 5 (lower is better)
Translates to: PMGHSMARPGGATPPQCWGFSRW*MNWMAS
Trigger: GGAGGCCATCCAGTTCATCAACCAGCGTGAGAAGCC...CCAGCACTGAGGAGGGGTTGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468746.5
CDS-3UTR CAA 90 bp GTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAGGCTTCTCACGCTGGTaGATGAACTGGATGGCCTCC +
Preference number: 5 (lower is better)
Translates to: VRVVRTPMGHSMARPGGAGFSRW*MNWMAS
Trigger: GGAGGCCATCCAGTTCATCAACCAGCGTGAGAAGCC...TGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CAA 90 bp AGTATGGCCAGGCCAGGCGGAGCAACCCCTCCTCAGTGCTGGGTCATCTTGGCCACGGCCTCGCTGATCTaGCTCATGGCGCCTTTGACA +
Preference number: 5 (lower is better)
Translates to: SMARPGGATPPQCWVILATASLI*LMAPLT
Trigger: TGTCAAAGGCGCCATGAGCAAGATCAGCGAGGCCGT...GGCCAAGATGACCCAGCACTGAGGAGGGGTTGCTCCGCCTGGCCTGGCCATACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468746.5
CDS-3UTR CAA 90 bp GCCAGGAGAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCGTTCCATTCATTCTaGTGCAGGTCTGCGGCCAGC +
Preference number: 5 (lower is better)
Translates to: ARRASEGGPHSDGTQYGQAFHSF*CRSAAS
Trigger: GCTGGCCGCAGACCTGCACAAGAATGAATGGAACGC...CTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTCTCCTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
CDS-3UTR CAA 90 bp CCAGGAGAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGGCGTTCCATTCATTCTaGTGCAGGTCTGCGGCCAGC +
Preference number: 5 (lower is better)
Translates to: PGEPVRVVRTPMGHSMARAFHSF*CRSAAS
Trigger: GCTGGCCGCAGACCTGCACAAGAATGAATGGAACGC...CCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTCTCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
CDS-3UTR CAA 90 bp CAGTATGGCCAGGCCAGGCGGAGCAACCCCTCCTCAGTGCTGGGTCATCTTGGCGCGTTCCATTCATTCTaGTGCAGGTCTGCGGCCAGC +
Preference number: 5 (lower is better)
Translates to: QYGQARRSNPSSVLGHLGAFHSF*CRSAAS
Trigger: GCTGGCCGCAGACCTGCACAAGAATGAATGGAACGC...GCCAAGATGACCCAGCACTGAGGAGGGGTTGCTCCGCCTGGCCTGGCCATACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468746.5
CDS-3UTR CAA 90 bp AGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCACTGGGTACAGATCCTaGTCCAGGTACTGGGGGATG +
Preference number: 5 (lower is better)
Translates to: SEGGPHSDGTQYGQARRSTGYRS*SRYWGM
Trigger: CATCCCCCAGTACCTGGACAAGGATCTGTACCCAGT...GCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CAA 90 bp CCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAACCCCTCCTCAGTGCTGGACTGGGTACAGATCCTaGTCCAGGTACTGGGGGATG +
Preference number: 5 (lower is better)
Translates to: PMGHSMARPGGATPPQCWTGYRS*SRYWGM
Trigger: CATCCCCCAGTACCTGGACAAGGATCTGTACCCAGT...CCAGCACTGAGGAGGGGTTGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468746.5
CDS-3UTR CAA 90 bp GCCAGGAGAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGTGGTCGAACCTCTCCTaGAGCAGCTCCGTGGTCTCA +
Preference number: 5 (lower is better)
Translates to: ARRASEGGPHSDGTQYGQWSNLS*SSSVVS
Trigger: TGAGACCACGGAGCTGCTCAAGGAGAGGTTCGACCA...CTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTCTCCTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CAA 90 bp GGAGAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCATGGTCGAACCTCTCCTaGAGCAGCTCCGTGGTCTCA +
Preference number: 5 (lower is better)
Translates to: GEPVRVVRTPMGHSMARPWSNLS*SSSVVS
Trigger: TGAGACCACGGAGCTGCTCAAGGAGAGGTTCGACCA...TGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CAA 90 bp GCCAGGAGAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGGCTTCTCACGCTGGTaGATGAACTGGATGGCCTCC +
Preference number: 5 (lower is better)
Translates to: ARRASEGGPHSDGTQYGQGFSRW*MNWMAS
Trigger: GGAGGCCATCCAGTTCATCAACCAGCGTGAGAAGCC...CTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTCTCCTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CAA 90 bp CCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAACCCCTCCTCAGTGCTGGCATGCCGCTGTTCCCTaGTCGTTGCTGGAGAACATG +
Preference number: 5 (lower is better)
Translates to: PMGHSMARPGGATPPQCWHAAVP*SLLENM
Trigger: CATGTTCTCCAGCAACGACAAGGGAACAGCGGCATG...CCAGCACTGAGGAGGGGTTGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468746.5
CDS TCA 90 bp CCCAGGGTACTTCACCAGAGGCTCTGCCCTCCCAAGGACCACACCTaGAGCCTCCCCTCCATTGTGTGTCCTCGGGACAGTGGATGGAAG +
Preference number: 5 (lower is better)
Translates to: PRVLHQRLCPPKDHT*SLPSIVCPRDSGWK
Trigger: CTTCCATCCACTGTCCCGAGGACACACAATGGAGGGGAGGCTTCAGGTGTGGTCCTTGGGAGGGCAGAGCCTCTGGTGAAGTACCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479677.6
CDS GCA 90 bp TCACCAGGCAAGAGCGGCGGTGAGAGAAAGTCTCGAAGCTCTTCTTaGCATGGTAGGATCCCATGCCGCTGTTCCCCACGCCCCCGAAGG +
Preference number: 5 (lower is better)
Translates to: SPGKSGGERKSRSSS*HGRIPCRCSPRPRR
Trigger: CCTTCGGGGGCGTGGGGAACAGCGGCATGGGATCCTACCATGGCAAGAAGAGCTTCGAGACTTTCTCTCACCGCCGCTCTTGCCTGGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000479677.6
ENST00000494157.6
CDS CCA 90 bp GTTGAAGGGGTAGTTCCAGGTGCCAATGACGAGGACCACGCCCAGTaGCTCCGAGTGGATGTAGAGCTCGTCCTGCTGAGTCTGGGGCGT +
Preference number: 5 (lower is better)
Translates to: VEGVVPGANDEDHAQ*LRVDVELVLLSLGR
Trigger: ACGCCCCAGACTCAGCAGGACGAGCTCTACATCCACTCGGAGCCACTGGGCGTGGTCCTCGTCATTGGCACCTGGAACTACCCCTTCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000426645.2
ENST00000439102.6
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000479677.6
ENST00000485231.1
ENST00000485472.3
ENST00000494157.6
ENST00000573368.5
ENST00000574162.5
ENST00000575860.1
CDS-3UTR CAA 90 bp ACACAGTATGGCCAGGCCAGGCGGAGCAACCCCTCCTCAGTGCTGGGTCATCTTCTCAGCTCCGAGGGCTaGAGGACCACTGAGTTCCCT +
Preference number: 5 (lower is better)
Translates to: TQYGQARRSNPSSVLGHLLSSEG*RTTEFP
Trigger: AGGGAACTCAGTGGTCCTCAAGCCCTCGGAGCTGAG...AAGATGACCCAGCACTGAGGAGGGGTTGCTCCGCCTGGCCTGGCCATACTGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468746.5
CDS-3UTR CAA 90 bp GGAGAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAACTGGGTACAGATCCTaGTCCAGGTACTGGGGGATG +
Preference number: 5 (lower is better)
Translates to: GEPVRVVRTPMGHSMARPTGYRS*SRYWGM
Trigger: CATCCCCCAGTACCTGGACAAGGATCTGTACCCAGT...TGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CAA 90 bp GCCAGGAGAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGACTGGGTACAGATCCTaGTCCAGGTACTGGGGGATG +
Preference number: 5 (lower is better)
Translates to: ARRASEGGPHSDGTQYGQTGYRS*SRYWGM
Trigger: CATCCCCCAGTACCTGGACAAGGATCTGTACCCAGT...CTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTCTCCTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CAA 90 bp TGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAACCCCTCTCAGGGACACCCCCATaGATTACTGGGTACAGATCC +
Preference number: 5 (lower is better)
Translates to: WSALRWDTVWPGQAEQPLSGTPP*ITGYRS
Trigger: GGATCTGTACCCAGTAATCAATGGGGGTGTCCCTGA...GAGGGGTTGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CAA 90 bp GAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCTCAGGGACACCCCCATaGATTACTGGGTACAGATCC +
Preference number: 5 (lower is better)
Translates to: EPVRVVRTPMGHSMARPGSGTPP*ITGYRS
Trigger: GGATCTGTACCCAGTAATCAATGGGGGTGTCCCTGA...GCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CAA 90 bp GTATGGCCAGGCCAGGCGGAGCAACCCCTCCTCAGTGCTGGGTCATCTTGGCCGTCAGGGACACCCCCATaGATTACTGGGTACAGATCC +
Preference number: 5 (lower is better)
Translates to: VWPGQAEQPLLSAGSSWPSGTPP*ITGYRS
Trigger: GGATCTGTACCCAGTAATCAATGGGGGTGTCCCTGA...CGGCCAAGATGACCCAGCACTGAGGAGGGGTTGCTCCGCCTGGCCTGGCCATAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468746.5
CDS-3UTR CAA 90 bp AGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCGAGCTTCTCCACAATTaGGTTCTGGATCGAGGGGTC +
Preference number: 5 (lower is better)
Translates to: SEGGPHSDGTQYGQARRSELLHN*VLDRGV
Trigger: GACCCCTCGATCCAGAACCAAATTGTGGAGAAGCTC...GCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CAA 90 bp TGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAACCCCTCGAGCTTCTCCACAATTaGGTTCTGGATCGAGGGGTC +
Preference number: 5 (lower is better)
Translates to: WSALRWDTVWPGQAEQPLELLHN*VLDRGV
Trigger: GACCCCTCGATCCAGAACCAAATTGTGGAGAAGCTC...GAGGGGTTGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CAA 90 bp GAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGAGCTTCTCCACAATTaGGTTCTGGATCGAGGGGTC +
Preference number: 5 (lower is better)
Translates to: EPVRVVRTPMGHSMARPGELLHN*VLDRGV
Trigger: GACCCCTCGATCCAGAACCAAATTGTGGAGAAGCTC...GCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CAA 90 bp AGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCTCTTGCTCATGGCGCTaGCTTGCAAAGCTGATGGCA +
Preference number: 5 (lower is better)
Translates to: SEGGPHSDGTQYGQARRSSCSWR*LAKLMA
Trigger: TGCCATCAGCTTTGCAAGCAAGCGCCATGAGCAAGA...GCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444455.5
CDS CCA 90 bp GGCGTCTTCTCCACGGGCTCATCCGCGGCCCACTCAGGGAGCTTCTaGATCATGTACTCGATCTCCTCTAGGACGTACACCACCTCCTCA +
Preference number: 5 (lower is better)
Translates to: GVFSTGSSAAHSGSF*IMYSISSRTYTTSS
Trigger: TGAGGAGGTGGTGTACGTCCTAGAGGAGATCGAGTACATGATCCAGAAGCTCCCTGAGTGGGCCGCGGATGAGCCCGTGGAGAAGACGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000426645.2
ENST00000439102.6
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000479677.6
ENST00000485231.1
ENST00000485472.3
ENST00000494157.6
ENST00000573368.5
ENST00000574162.5
ENST00000575860.1
CDS-3UTR CAA 90 bp CCAGGAGAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGTCAGGGACACCCCCATaGATTACTGGGTACAGATCC +
Preference number: 5 (lower is better)
Translates to: PGEPVRVVRTPMGHSMARSGTPP*ITGYRS
Trigger: GGATCTGTACCCAGTAATCAATGGGGGTGTCCCTGA...CCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTCTCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CAA 90 bp GGAGAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCATCAGGGACACCCCCATaGATTACTGGGTACAGATCC +
Preference number: 5 (lower is better)
Translates to: GEPVRVVRTPMGHSMARPSGTPP*ITGYRS
Trigger: GGATCTGTACCCAGTAATCAATGGGGGTGTCCCTGA...TGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CAA 90 bp GCCAGGAGAGCCAGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGAGCTTCTCCACAATTaGGTTCTGGATCGAGGGGTC +
Preference number: 5 (lower is better)
Translates to: ARRASEGGPHSDGTQYGQELLHN*VLDRGV
Trigger: GACCCCTCGATCCAGAACCAAATTGTGGAGAAGCTC...CTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACTGGCTCTCCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CAA 90 bp AGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCCGTTCCATTCATTCTTaGACACAGCCTCTCCCGGTA +
Preference number: 5 (lower is better)
Translates to: SEGGPHSDGTQYGQARRSRSIHS*TQPLPV
Trigger: TACCGGGAGAGGCTGTGTCAAAGAATGAATGGAACG...GCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494157.6
CDS CCA 90 bp GCTCATGGCGCCTTTGACACAGCCTCTCCCGGTAACTGGGGCTCCTaGAACGGCAAGAGCCAAGAGGGGACGTATTTAAGGACCCTGCTT +
Preference number: 5 (lower is better)
Translates to: AHGAFDTASPGNWGS*NGKSQEGTYLRTLL
Trigger: AAGCAGGGTCCTTAAATACGTCCCCTCTTGGCTCTTGCCGTTCCAGGAGCCCCAGTTACCGGGAGAGGCTGTGTCAAAGGCGCCATGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395555.7
ENST00000468746.5
CDS CCA 90 bp CCCCCAGAGCTCTGCACACGCAGTCAGCCACTCTCCAGATCAGATTaGAGGGGCGCAGTCCGCGATTCCACACCCAAGCCGATAAAGAAA +
Preference number: 5 (lower is better)
Translates to: PPELCTRSQPLSRSD*RGAVRDSTPKPIKK
Trigger: TTTCTTTATCGGCTTGGGTGTGGAATCGCGGACTGCGCCCCTCCAATCTGATCTGGAGAGTGGCTGACTGCGTGTGCAGAGCTCTGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000439102.6
ENST00000444455.5
ENST00000575103.1
CDS-3UTR CAA 90 bp CACAGTATGGCCAGGCCAGGCGGAGCAACCCCTCCTCAGTGCTGGGTCATCTTGGAGCTTCTCCACAATTaGGTTCTGGATCGAGGGGTC +
Preference number: 5 (lower is better)
Translates to: HSMARPGGATPPQCWVILELLHN*VLDRGV
Trigger: GACCCCTCGATCCAGAACCAAATTGTGGAGAAGCTC...CAAGATGACCCAGCACTGAGGAGGGGTTGCTCCGCCTGGCCTGGCCATACTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468746.5
CDS-3UTR CAA 90 bp TATTGGTCTAGAAAGGGGTGGAGACTTGGAATGGTGAGGCCTGGGCCCATGTGGTGGACGATGACATCGTaGGCCGCCACCCCACCACTG +
Preference number: 5 (lower is better)
Translates to: YWSRKGWRLGMVRPGPMWWTMTS*AATPPL
Trigger: CAGTGGTGGGGTGGCGGCCAACGATGTCATCGTCCA...CCACATGGGCCCAGGCCTCACCATTCCAAGTCTCCACCCCTTTCTAGACCAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000494157.6
CDS CCA 90 bp GCTGATCTTGCTCATGGCGCCTTTGACACAGCCTCTCCCGGTAACTaGGGCTCCTGGAACGGCAAGAGCCAAGAGGGGACGTATTTAAGG +
Preference number: 5 (lower is better)
Translates to: ADLAHGAFDTASPGN*GSWNGKSQEGTYLR
Trigger: CCTTAAATACGTCCCCTCTTGGCTCTTGCCGTTCCAGGAGCCCCAGTTACCGGGAGAGGCTGTGTCAAAGGCGCCATGAGCAAGATCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395555.7
ENST00000468746.5
CDS CCA 90 bp GAATTCTATAGGAAGGGACTTCCCTGGGCTCGGCCTTGGGGAAAATaGCCTTTCCGCTGGAAGGTCCACTTTCTGCCTCGCCTCCTCTCC +
Preference number: 5 (lower is better)
Translates to: EFYRKGLPWARPWGK*PFRWKVHFLPRLLS
Trigger: GGAGAGGAGGCGAGGCAGAAAGTGGACCTTCCAGCGGAAAGGCCATTTTCCCCAAGGCCGAGCCCAGGGAAGTCCCTTCCTATAGAATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457500.6
CDS CCA 90 bp ACCCTGCCTGAATTCTATAGGAAGGGACTTCCCTGGGCTCGGCCTTaGGGAAAATGGCCTTTCCGCTGGAAGGTCCACTTTCTGCCTCGC +
Preference number: 5 (lower is better)
Translates to: TLPEFYRKGLPWARP*GKWPFRWKVHFLPR
Trigger: GCGAGGCAGAAAGTGGACCTTCCAGCGGAAAGGCCATTTTCCCCAAGGCCGAGCCCAGGGAAGTCCCTTCCTATAGAATTCAGGCAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457500.6
CDS-3UTR CAA 90 bp TATTGGTCTAGAAAGGGGTGGAGACTTGGAATGGTGAGGCCTGGGCCCATGTGGCTCAGCTCCGAGGGCTaGAGGACCACTGAGTTCCCT +
Preference number: 5 (lower is better)
Translates to: YWSRKGWRLGMVRPGPMWLSSEG*RTTEFP
Trigger: AGGGAACTCAGTGGTCCTCAAGCCCTCGGAGCTGAG...CCACATGGGCCCAGGCCTCACCATTCCAAGTCTCCACCCCTTTCTAGACCAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CAA 90 bp GGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAACCCCTCCATCTTCTTAATCACCTaGTCGTTGCTGGAGAACATG +
Preference number: 5 (lower is better)
Translates to: GPHSDGTQYGQARRSNPSIFLIT*SLLENM
Trigger: CATGTTCTCCAGCAACGACAAGGTGATTAAGAAGAT...GGAGGGGTTGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000494157.6
CDS-3UTR CAA 90 bp TATTGGTCTAGAAAGGGGTGGAGACTTGGAATGGTGAGGCCTGGGCCCATGTGGACTCTCCAGATCAGATaGGAGGGGCGCAGTCCGCGA +
Preference number: 5 (lower is better)
Translates to: YWSRKGWRLGMVRPGPMWTLQIR*EGRSPR
Trigger: TCGCGGACTGCGCCCCTCCAATCTGATCTGGAGAGT...CCACATGGGCCCAGGCCTCACCATTCCAAGTCTCCACCCCTTTCTAGACCAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444455.5
CDS-3UTR CAA 90 bp TATTGGTCTAGAAAGGGGTGGAGACTTGGAATGGTGAGGCCTGGGCCCATGTGGCCTGCTTCCCGTCCATaGAGCCCTTGGAGTTCCTGC +
Preference number: 5 (lower is better)
Translates to: YWSRKGWRLGMVRPGPMWPASRP*SPWSSC
Trigger: GCAGGAACTCCAAGGGCTCAATGGACGGGAAGCAGG...CCACATGGGCCCAGGCCTCACCATTCCAAGTCTCCACCCCTTTCTAGACCAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494157.6
CDS GCA 90 bp TCACCAGGCAAGAGCGGCGGTGAGAGAAAGTCTCGAAGCTCTTCTTaGCATGGTAGGATCCCATGCCGCTGTTCCCTTGTCGTTGCTGGA +
Preference number: 5 (lower is better)
Translates to: SPGKSGGERKSRSSS*HGRIPCRCSLVVAG
Trigger: TCCAGCAACGACAAGGGAACAGCGGCATGGGATCCTACCATGGCAAGAAGAGCTTCGAGACTTTCTCTCACCGCCGCTCTTGCCTGGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468746.5
CDS GCA 90 bp CAATTTATACCCATCCCGAGGTCGTGTCCGCTTATCAAGCATCTGTaGCCACTTGCTGTGAACTTGCTGGGGACCCCTGCAGCCTGGGCA +
Preference number: 5 (lower is better)
Translates to: QFIPIPRSCPLIKHL*PLAVNLLGTPAAWA
Trigger: TGCCCAGGCTGCAGGGGTCCCCAGCAAGTTCACAGCAAGTGGGCACAGATGCTTGATAAGCGGACACGACCTCGGGATGGGTATAAATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487650.2
CDS-3UTR CAA 90 bp TATTGGTCTAGAAAGGGGTGGAGACTTGGAATGGTGAGGCCTGGGCCCATGTGGACGGCCTCGCTGATCTaGCTCATGGCGCCTTTGACA +
Preference number: 5 (lower is better)
Translates to: YWSRKGWRLGMVRPGPMWTASLI*LMAPLT
Trigger: TGTCAAAGGCGCCATGAGCAAGATCAGCGAGGCCGT...CCACATGGGCCCAGGCCTCACCATTCCAAGTCTCCACCCCTTTCTAGACCAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000468746.5
CDS-3UTR CAA 90 bp TATTGGTCTAGAAAGGGGTGGAGACTTGGAATGGTGAGGCCTGGGCCCATGTGGTGGTCGAACCTCTCCTaGAGCAGCTCCGTGGTCTCA +
Preference number: 5 (lower is better)
Translates to: YWSRKGWRLGMVRPGPMWWSNLS*SSSVVS
Trigger: TGAGACCACGGAGCTGCTCAAGGAGAGGTTCGACCA...CCACATGGGCCCAGGCCTCACCATTCCAAGTCTCCACCCCTTTCTAGACCAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CAA 90 bp TATTGGTCTAGAAAGGGGTGGAGACTTGGAATGGTGAGGCCTGGGCCCATGTGGGGCTTCTCACGCTGGTaGATGAACTGGATGGCCTCC +
Preference number: 5 (lower is better)
Translates to: YWSRKGWRLGMVRPGPMWGFSRW*MNWMAS
Trigger: GGAGGCCATCCAGTTCATCAACCAGCGTGAGAAGCC...CCACATGGGCCCAGGCCTCACCATTCCAAGTCTCCACCCCTTTCTAGACCAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000494157.6
CDS-3UTR CAA 90 bp GTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCAATCTTCTTAATCACCTaGTCGTTGCTGGAGAACATG +
Preference number: 5 (lower is better)
Translates to: VRVVRTPMGHSMARPGGAIFLIT*SLLENM
Trigger: CATGTTCTCCAGCAACGACAAGGTGATTAAGAAGAT...TGCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000494157.6
CDS-3UTR CAA 90 bp AGTGAGGGTGGTCCGCACTCCGATGGGACACAGTATGGCCAGGCCAGGCGGAGCATCTTCTTAATCACCTaGTCGTTGCTGGAGAACATG +
Preference number: 5 (lower is better)
Translates to: SEGGPHSDGTQYGQARRSIFLIT*SLLENM
Trigger: CATGTTCTCCAGCAACGACAAGGTGATTAAGAAGAT...GCTCCGCCTGGCCTGGCCATACTGTGTCCCATCGGAGTGCGGACCACCCTCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000494157.6
CDS CCA 90 bp GGACCACACCTGAAGCCTCCCCTCCATTGTGTGTCCTCGGGACAGTaGATGGAAGAGTTGTTAGCAAACAAGCACATGTCACGGGGCACA +
Preference number: 5 (lower is better)
Translates to: GPHLKPPLHCVSSGQ*MEELLANKHMSRGT
Trigger: TGTGCCCCGTGACATGTGCTTGTTTGCTAACAACTCTTCCATCCACTGTCCCGAGGACACACAATGGAGGGGAGGCTTCAGGTGTGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479677.6
CDS CCA 90 bp TTCCATTCATTCTTTGACACAGCCTCTCCCGGTAACTGGGGCTCCTaGAACGGCAAGAGCCAAGAGGGGACGTATTTAAGGACCCTGCTT +
Preference number: 5 (lower is better)
Translates to: FHSFFDTASPGNWGS*NGKSQEGTYLRTLL
Trigger: AAGCAGGGTCCTTAAATACGTCCCCTCTTGGCTCTTGCCGTTCCAGGAGCCCCAGTTACCGGGAGAGGCTGTGTCAAAGAATGAATGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479677.6
ENST00000494157.6
CDS TCA 90 bp GGGACTTTTGATGGGGGTCTCCAATCCATAAATCTGCTCTCTCGTTaGATAGCTGAGAAGAGGGCCAAGGGTCTGTGTGGTCACCGAAAA +
Preference number: 5 (lower is better)
Translates to: GTFDGGLQSINLLSR*IAEKRAKGLCGHRK
Trigger: TTTTCGGTGACCACACAGACCCTTGGCCCTCTTCTCAGCTATTCAACGAGAGAGCAGATTTATGGATTGGAGACCCCCATCAAAAGTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574162.5
CDS-3UTR CAA 90 bp TATTGGTCTAGAAAGGGGTGGAGACTTGGAATGGTGAGGCCTGGGCCCATGTGGATCTTCTTAATCACCTaGTCGTTGCTGGAGAACATG +
Preference number: 5 (lower is better)
Translates to: YWSRKGWRLGMVRPGPMWIFLIT*SLLENM
Trigger: CATGTTCTCCAGCAACGACAAGGTGATTAAGAAGAT...CCACATGGGCCCAGGCCTCACCATTCCAAGTCTCCACCCCTTTCTAGACCAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000494157.6
CDS TCA 72 bp ATGGCCCCGACACTGGCAGAAGGCGGCCGCCCAGCCTaGGCACCTTGTGCAGGTCTGCGGCCAGCGCGCCCA +
Preference number: 6 (lower is better)
Translates to: MAPTLAEGGRPA*APCAGLRPARP
Trigger: TGGGCGCGCTGGCCGCAGACCTGCACAAGGTGCTCAGGCTGGGCGGCCGCCTTCTGCCAGTGTCGGGGCCAT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575103.1
CDS GCA 72 bp AGGCGCTGCAGCGCCTCCAGCTGCTGGATCCGGAACTaGAGCGGACGGGTCCTGCCCGAGCTGAAGGCGGCG +
Preference number: 6 (lower is better)
Translates to: RRCSASSCWIRN*SGRVLPELKAA
Trigger: CGCCGCCTTCAGCTCGGGCAGGACCCGTCCGCTGCAGTTCCGGATCCAGCAGCTGGAGGCGCTGCAGCGCCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000426645.2
ENST00000439102.6
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000570414.1
ENST00000573368.5
ENST00000574162.5
ENST00000575103.1
ENST00000575860.1
CDS GCA 72 bp GACACCCGCCGCAACCCGAGTCCTAAGCCGAACTGCTaGTGGGGGCTCTTGGCAGCGTGCTCGCGGCAGGGC +
Preference number: 6 (lower is better)
Translates to: DTRRNPSPKPNC*WGLLAACSRQG
Trigger: GCCCTGCCGCGAGCACGCTGCCAAGAGCCCCCAGCAGCAGTTCGGCTTAGGACTCGGGTTGCGGCGGGTGTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457500.6
CDS CAA 72 bp AAGGCGGCGCGGGCGCGCTTCACGGCCTCGCTGATCTaGCTCATGGCGCTGCTGCTGGGGGCTCTTGGCAGC +
Preference number: 6 (lower is better)
Translates to: KAARARFTASLI*LMALLLGALGS
Trigger: GCTGCCAAGAGCCCCCAGCAGCAGCGCCATGAGCAAGATCAGCGAGGCCGTGAAGCGCGCCCGCGCCGCCTT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000573368.5
CDS CAA 90 bp CCCGAGCTGAAGGCGGCGCGGGCGCGCTTCACGGCCTCGCTGATCTaGCTCATGGCGCCTGGGGACAGAGAGCACCTGCAGCTGGCTGAG +
Preference number: 6 (lower is better)
Translates to: PELKAARARFTASLI*LMAPGDREHLQLAE
Trigger: CTCAGCCAGCTGCAGGTGCTCTCTGTCCCCAGGCGCCATGAGCAAGATCAGCGAGGCCGTGAAGCGCGCCCGCGCCGCCTTCAGCTCGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457500.6
CDS CAA 90 bp ACCCGCCGCAACCCGAGTCCTAAGCCGAACTGCTGCTGGGGGCTCTaGGCAGCGTGCTCGCGGCAGGGCCTTTCCCGGCCTTTTCCGCTC +
Preference number: 6 (lower is better)
Translates to: TRRNPSPKPNCCWGL*AACSRQGLSRPFPL
Trigger: GAGCGGAAAAGGCCGGGAAAGGCCCTGCCGCGAGCACGCTGCCAAGAGCCCCCAGCAGCAGTTCGGCTTAGGACTCGGGTTGCGGCGGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457500.6
CDS CAA 90 bp GCCTCCTCTCCCGCCCCTCACTCAGACGCCTGGGCCCTGGCTGCCTaGCTAGCCCCTGAGAAGGTGACACCCGCCGCAACCCGAGTCCTA +
Preference number: 6 (lower is better)
Translates to: ASSPAPHSDAWALAA*LAPEKVTPAATRVL
Trigger: TAGGACTCGGGTTGCGGCGGGTGTCACCTTCTCAGGGGCTAGCAAGGCAGCCAGGGCCCAGGCGTCTGAGTGAGGGGCGGGAGAGGAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457500.6
CDS GCA 72 bp GGTGACACCCGCCGCAACCCGAGTCCTAAGCCGAACTaGTGCTGGGGGCTCTTGGCAGCGTGCTCGCGGCAG +
Preference number: 6 (lower is better)
Translates to: GDTRRNPSPKPN*CWGLLAACSRQ
Trigger: CTGCCGCGAGCACGCTGCCAAGAGCCCCCAGCAGCAGTTCGGCTTAGGACTCGGGTTGCGGCGGGTGTCACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457500.6
CDS CCA 72 bp ACCCGCCGCAACCCGAGTCCTAAGCCGAACTGCTGCTaGGGGCTCTTGGCAGCGTGCTCGCGGCAGGGCCTT +
Preference number: 6 (lower is better)
Translates to: TRRNPSPKPNCC*GLLAACSRQGL
Trigger: AAGGCCCTGCCGCGAGCACGCTGCCAAGAGCCCCCAGCAGCAGTTCGGCTTAGGACTCGGGTTGCGGCGGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457500.6
CDS CAA 72 bp AAGGCGGCGCGGGCGCGCTTCACGGCCTCGCTGATCTaGCTCATGGCGCCTGGGGACAGAGAGCACCTGCAG +
Preference number: 6 (lower is better)
Translates to: KAARARFTASLI*LMAPGDREHLQ
Trigger: CTGCAGGTGCTCTCTGTCCCCAGGCGCCATGAGCAAGATCAGCGAGGCCGTGAAGCGCGCCCGCGCCGCCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457500.6
CDS GCA 72 bp CCTAAGCCGAACTGCTGCTGGGGGCTCTTGGCAGCGTaGTCGCGGCAGGGCCTTTCCCGGCCTTTTCCGCTC +
Preference number: 6 (lower is better)
Translates to: PKPNCCWGLLAA*SRQGLSRPFPL
Trigger: GAGCGGAAAAGGCCGGGAAAGGCCCTGCCGCGAGCACGCTGCCAAGAGCCCCCAGCAGCAGTTCGGCTTAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457500.6
CDS CCA 72 bp ACCCGAGTCCTAAGCCGAACTGCTGCTGGGGGCTCTTaGCAGCGTGCTCGCGGCAGGGCCTTTCCCGGCCTT +
Preference number: 6 (lower is better)
Translates to: TRVLSRTAAGGS*QRARGRAFPGL
Trigger: AAGGCCGGGAAAGGCCCTGCCGCGAGCACGCTGCCAAGAGCCCCCAGCAGCAGTTCGGCTTAGGACTCGGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457500.6
CDS CCA 72 bp GTCCCTGCTCCGCGGATCCCTGGGACCTCTGCCTCCTaGTTTGGGGGATGGCAGAGCTGCCAGAGGTCCAGG +
Preference number: 6 (lower is better)
Translates to: VPAPRIPGTSAS*FGGWQSCQRSR
Trigger: CCTGGACCTCTGGCAGCTCTGCCATCCCCCAAACCAGGAGGCAGAGGTCCCAGGGATCCGCGGAGCAGGGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000570414.1
ENST00000574162.5
CDS CAA 72 bp AACCCGAGTCCTAAGCCGAACTGCTGCTGGGGGCTCTaGGCAGCGTGCTCGCGGCAGGGCCTTTCCCGGCCT +
Preference number: 6 (lower is better)
Translates to: NPSPKPNCCWGL*AACSRQGLSRP
Trigger: AGGCCGGGAAAGGCCCTGCCGCGAGCACGCTGCCAAGAGCCCCCAGCAGCAGTTCGGCTTAGGACTCGGGTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457500.6
CDS GCA 72 bp TCAGGGCCTCTCACTCCACGGCCACCTTGGTGTCCCTaGTCCGCGGATCCCTGGGACCTCTGCCTCCTGGTT +
Preference number: 6 (lower is better)
Translates to: SGPLTPRPPWCP*SADPWDLCLLV
Trigger: AACCAGGAGGCAGAGGTCCCAGGGATCCGCGGAGCAGGGACACCAAGGTGGCCGTGGAGTGAGAGGCCCTGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570414.1
ENST00000574162.5
CDS CAA 72 bp AAGGCGGCGCGGGCGCGCTTCACGGCCTCGCTGATCTaGCTCATGGCGCCTTTGACACAGCCTCTCCCGGTA +
Preference number: 6 (lower is better)
Translates to: KAARARFTASLI*LMAPLTQPLPV
Trigger: TACCGGGAGAGGCTGTGTCAAAGGCGCCATGAGCAAGATCAGCGAGGCCGTGAAGCGCGCCCGCGCCGCCTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000468746.5
CDS CAA 72 bp AAGGCGGCGCGGGCGCGCTTCACGGCCTCGCTGATCTaGCTCATGGCGCAGTTAGCAGGTGGCATGTCAGGG +
Preference number: 6 (lower is better)
Translates to: KAARARFTASLI*LMAQLAGGMSG
Trigger: CCCTGACATGCCACCTGCTAACTGCGCCATGAGCAAGATCAGCGAGGCCGTGAAGCGCGCCCGCGCCGCCTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574162.5
CDS CAA 90 bp CCCGAGCTGAAGGCGGCGCGGGCGCGCTTCACGGCCTCGCTGATCTaGCTCATGGCGCAGTTAGCAGGTGGCATGTCAGGGTTTGAACCC +
Preference number: 6 (lower is better)
Translates to: PELKAARARFTASLI*LMAQLAGGMSGFEP
Trigger: GGGTTCAAACCCTGACATGCCACCTGCTAACTGCGCCATGAGCAAGATCAGCGAGGCCGTGAAGCGCGCCCGCGCCGCCTTCAGCTCGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574162.5
CDS CCA 72 bp CCCACGCCCCCGAAGGGCAGAGAGTGCAAGGTGATGTaGACGATGACATCGTTGGCCGCCACCCCACCACTG +
Preference number: 6 (lower is better)
Translates to: PTPPKGRECKVM*TMTSLAATPPL
Trigger: CAGTGGTGGGGTGGCGGCCAACGATGTCATCGTCCACATCACCTTGCACTCTCTGCCCTTCGGGGGCGTGGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000479677.6
ENST00000494157.6
CDS CAA 90 bp CCCGAGCTGAAGGCGGCGCGGGCGCGCTTCACGGCCTCGCTGATCTaGCTCATGGCGCATGCATCTCTGTCAGCAGCTCATGCCTTTAGC +
Preference number: 6 (lower is better)
Translates to: PELKAARARFTASLI*LMAHASLSAAHAFS
Trigger: GCTAAAGGCATGAGCTGCTGACAGAGATGCATGCGCCATGAGCAAGATCAGCGAGGCCGTGAAGCGCGCCCGCGCCGCCTTCAGCTCGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570414.1
CDS TCA 72 bp ACTCGGCTCTGCTGCCTTCCTTCCAGTCATGGAGTCTaGCGGCCCATCAGGGCCTCTCACTCCACGGCCACC +
Preference number: 6 (lower is better)
Translates to: TRLCCLPSSHGV*RPIRASHSTAT
Trigger: GGTGGCCGTGGAGTGAGAGGCCCTGATGGGCCGTCAGACTCCATGACTGGAAGGAAGGCAGCAGAGCCGAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570414.1
ENST00000574162.5
CDS GCA 72 bp ATGCCGCTGTTCCCCACGCCCCCGAAGGGCAGAGAGTaGAAGGTGATGTGGACGATGACATCGTTGGCCGCC +
Preference number: 6 (lower is better)
Translates to: MPLFPTPPKGRE*KVMWTMTSLAA
Trigger: GGCGGCCAACGATGTCATCGTCCACATCACCTTGCACTCTCTGCCCTTCGGGGGCGTGGGGAACAGCGGCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000479677.6
ENST00000494157.6
CDS GCA 72 bp GTCACGCACCTATGTAGCGAGTGGCGGCATCCCCGGTaGCCCCATAAGCCACCTTCTGGCCCTCAATCAGGC +
Preference number: 6 (lower is better)
Translates to: VTHLCSEWRHPR*PHKPPSGPQSG
Trigger: GCCTGATTGAGGGCCAGAAGGTGGCTTATGGGGGCACCGGGGATGCCGCCACTCGCTACATAGGTGCGTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487650.2
CDS GCA 72 bp TTGGGGGATGGCAGAGCTGCCAGAGGTCCAGGAGGATaGTCCAGAGATGATGGTCCCAGAGGCAGGGACCCC +
Preference number: 6 (lower is better)
Translates to: LGDGRAARGPGG*SRDDGPRGRDP
Trigger: GGGGTCCCTGCCTCTGGGACCATCATCTCTGGAGCATCCTCCTGGACCTCTGGCAGCTCTGCCATCCCCCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000570414.1
ENST00000574162.5
CDS CCA 72 bp GCTCATGGCGCCTTTGACACAGCCTCTCCCGGTAACTaGGGCTCCTGGAACGGCAAGAGCCAAGAGGGGACG +
Preference number: 6 (lower is better)
Translates to: AHGAFDTASPGN*GSWNGKSQEGT
Trigger: CGTCCCCTCTTGGCTCTTGCCGTTCCAGGAGCCCCAGTTACCGGGAGAGGCTGTGTCAAAGGCGCCATGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395555.7
ENST00000468746.5
CDS CAA 72 bp AAGGCGGCGCGGGCGCGCTTCACGGCCTCGCTGATCTaGCTCATGGCGCTTGCTTGCAAAGCTGATGGCACA +
Preference number: 6 (lower is better)
Translates to: KAARARFTASLI*LMALACKADGT
Trigger: TGTGCCATCAGCTTTGCAAGCAAGCGCCATGAGCAAGATCAGCGAGGCCGTGAAGCGCGCCCGCGCCGCCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000439102.6
ENST00000444455.5
ENST00000575103.1
CDS CAA 72 bp AAGGCGGCGCGGGCGCGCTTCACGGCCTCGCTGATCTaGCTCATGGCGCATGCATCTCTGTCAGCAGCTCAT +
Preference number: 6 (lower is better)
Translates to: KAARARFTASLI*LMAHASLSAAH
Trigger: ATGAGCTGCTGACAGAGATGCATGCGCCATGAGCAAGATCAGCGAGGCCGTGAAGCGCGCCCGCGCCGCCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570414.1
CDS GCA 72 bp ACAGAGGGACACACACGGGCACACGCTGGCCAGAGCTaGACCACCTGGCCCTCTGAGTTGCTGAGATGTTGG +
Preference number: 6 (lower is better)
Translates to: TEGHTRAHAGQS*TTWPSELLRCW
Trigger: CCAACATCTCAGCAACTCAGAGGGCCAGGTGGTGCAGCTCTGGCCAGCGTGTGCCCGTGTGTGTCCCTCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479677.6
CDS CCA 72 bp CTCTGCACACGCAGTCAGCCACTCTCCAGATCAGATTaGAGGGGCGCAGTCCGCGATTCCACACCCAAGCCG +
Preference number: 6 (lower is better)
Translates to: LCTRSQPLSRSD*RGAVRDSTPKP
Trigger: CGGCTTGGGTGTGGAATCGCGGACTGCGCCCCTCCAATCTGATCTGGAGAGTGGCTGACTGCGTGTGCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000439102.6
ENST00000444455.5
ENST00000575103.1
CDS CAA 72 bp GCTCTGCACACGCAGTCAGCCACTCTCCAGATCAGATaGGAGGGGCGCAGTCCGCGATTCCACACCCAAGCC +
Preference number: 6 (lower is better)
Translates to: ALHTQSATLQIR*EGRSPRFHTQA
Trigger: GGCTTGGGTGTGGAATCGCGGACTGCGCCCCTCCAATCTGATCTGGAGAGTGGCTGACTGCGTGTGCAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000439102.6
ENST00000444455.5
ENST00000575103.1
CDS TCA 72 bp CTTCACCAGAGGCTCTGCCCTCCCAAGGACCACACCTaGAGCCTCCCCTCCATTGTGTGTCCTCGGGACAGT +
Preference number: 6 (lower is better)
Translates to: LHQRLCPPKDHT*SLPSIVCPRDS
Trigger: ACTGTCCCGAGGACACACAATGGAGGGGAGGCTTCAGGTGTGGTCCTTGGGAGGGCAGAGCCTCTGGTGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479677.6
CDS TCA 72 bp CTTCACCAGAGGCTCTGCCCTCCCAAGGACCACACCTaGAGCCTCCCCTCCATTGTGTGTCCTGCAGCGATG +
Preference number: 6 (lower is better)
Translates to: LHQRLCPPKDHT*SLPSIVCPAAM
Trigger: CATCGCTGCAGGACACACAATGGAGGGGAGGCTTCAGGTGTGGTCCTTGGGAGGGCAGAGCCTCTGGTGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485231.1
CDS GCA 72 bp GAGGTCGTGTCCGCTTATCAAGCATCTGTGCCCACTTaGTGTGAACTTGCTGGGGACCCCTGCAGCCTGGGC +
Preference number: 6 (lower is better)
Translates to: EVVSAYQASVPT*CELAGDPCSLG
Trigger: GCCCAGGCTGCAGGGGTCCCCAGCAAGTTCACAGCAAGTGGGCACAGATGCTTGATAAGCGGACACGACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487650.2
CDS CCA 72 bp AGGAAGGGACTTCCCTGGGCTCGGCCTTGGGGAAAATaGCCTTTCCGCTGGAAGGTCCACTTTCTGCCTCGC +
Preference number: 6 (lower is better)
Translates to: RKGLPWARPWGK*PFRWKVHFLPR
Trigger: GCGAGGCAGAAAGTGGACCTTCCAGCGGAAAGGCCATTTTCCCCAAGGCCGAGCCCAGGGAAGTCCCTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457500.6
CDS TCA 72 bp CCACTGTTCATGAATTTCCCCCAGGCGATGCGTCTGTaGGAATCCCAGACTGGACGGCAGGCCACGTCCAGG +
Preference number: 6 (lower is better)
Translates to: PLFMNFPQAMRL*ESQTGRQATSR
Trigger: CCTGGACGTGGCCTGCCGTCCAGTCTGGGATTCTCACAGACGCATCGCCTGGGGGAAATTCATGAACAGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485472.3
CDS GCA 72 bp CCCATCCCGAGGTCGTGTCCGCTTATCAAGCATCTGTaGCCACTTGCTGTGAACTTGCTGGGGACCCCTGCA +
Preference number: 6 (lower is better)
Translates to: PIPRSCPLIKHL*PLAVNLLGTPA
Trigger: TGCAGGGGTCCCCAGCAAGTTCACAGCAAGTGGGCACAGATGCTTGATAAGCGGACACGACCTCGGGATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487650.2
CDS CCA 72 bp TCCACGGGCTCATCCGCGGCCCACTCAGGGAGCTTCTaGATCATGTACTCGATCTCCTCTAGGACGTACACC +
Preference number: 6 (lower is better)
Translates to: STGSSAAHSGSF*IMYSISSRTYT
Trigger: GGTGTACGTCCTAGAGGAGATCGAGTACATGATCCAGAAGCTCCCTGAGTGGGCCGCGGATGAGCCCGTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000426645.2
ENST00000439102.6
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000479677.6
ENST00000485231.1
ENST00000485472.3
ENST00000494157.6
ENST00000573368.5
ENST00000574162.5
ENST00000575860.1
CDS CCA 72 bp GTAGTTCCAGGTGCCAATGACGAGGACCACGCCCAGTaGCTCCGAGTGGATGTAGAGCTCGTCCTGCTGAGT +
Preference number: 6 (lower is better)
Translates to: VVPGANDEDHAQ*LRVDVELVLLS
Trigger: ACTCAGCAGGACGAGCTCTACATCCACTCGGAGCCACTGGGCGTGGTCCTCGTCATTGGCACCTGGAACTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000426645.2
ENST00000439102.6
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000479677.6
ENST00000485231.1
ENST00000485472.3
ENST00000494157.6
ENST00000573368.5
ENST00000574162.5
ENST00000575860.1
CDS CAA 90 bp ACCCCCAGAGCTCTGCACACGCAGTCAGCCACTCTCCAGATCAGATaGGAGGGGCGCAGTCCGCGATTCCACACCCAAGCCGATAAAGAA +
Preference number: 6 (lower is better)
Translates to: TPRALHTQSATLQIR*EGRSPRFHTQADKE
Trigger: TTCTTTATCGGCTTGGGTGTGGAATCGCGGACTGCGCCCCTCCAATCTGATCTGGAGAGTGGCTGACTGCGTGTGCAGAGCTCTGGGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000439102.6
ENST00000444455.5
ENST00000575103.1
CDS GCA 72 bp AAGAGCGGCGGTGAGAGAAAGTCTCGAAGCTCTTCTTaGCATGGTAGGATCCCATGCCGCTGTTCCCCACGC +
Preference number: 6 (lower is better)
Translates to: KSGGERKSRSSS*HGRIPCRCSPR
Trigger: GCGTGGGGAACAGCGGCATGGGATCCTACCATGGCAAGAAGAGCTTCGAGACTTTCTCTCACCGCCGCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000479677.6
ENST00000494157.6
CDS CCA 72 bp GCCTTTGACACAGCCTCTCCCGGTAACTGGGGCTCCTaGAACGGCAAGAGCCAAGAGGGGACGTATTTAAGG +
Preference number: 6 (lower is better)
Translates to: AFDTASPGNWGS*NGKSQEGTYLR
Trigger: CCTTAAATACGTCCCCTCTTGGCTCTTGCCGTTCCAGGAGCCCCAGTTACCGGGAGAGGCTGTGTCAAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395555.7
ENST00000468746.5
CDS CAA 72 bp GGCAGAGAGTGCAAGGTGATGTGGACGATGACATCGTaGGCCGCCACCCCACCACTGGATGTCTCTGCAATC +
Preference number: 6 (lower is better)
Translates to: GRECKVMWTMTS*AATPPLDVSAI
Trigger: GATTGCAGAGACATCCAGTGGTGGGGTGGCGGCCAACGATGTCATCGTCCACATCACCTTGCACTCTCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000444455.5
ENST00000457500.6
ENST00000479677.6
ENST00000494157.6
CDS CCA 72 bp AAAAGCGCTGGTTTCTTGGCAGAGCTGAACCAGGCTTaGTGTGTAAACCACGCGTGCCACACCTGGGAGACG +
Preference number: 6 (lower is better)
Translates to: KSAGFLAELNQA*CVNHACHTWET
Trigger: CGTCTCCCAGGTGTGGCACGCGTGGTTTACACACCAAGCCTGGTTCAGCTCTGCCAAGAAACCAGCGCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439102.6
CDS CCA 72 bp TTCCATTCATTCTTTGACACAGCCTCTCCCGGTAACTaGGGCTCCTGGAACGGCAAGAGCCAAGAGGGGACG +
Preference number: 6 (lower is better)
Translates to: FHSFFDTASPGN*GSWNGKSQEGT
Trigger: CGTCCCCTCTTGGCTCTTGCCGTTCCAGGAGCCCCAGTTACCGGGAGAGGCTGTGTCAAAGAATGAATGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479677.6
ENST00000494157.6
CDS TCA 72 bp GCTCATGGCGCAGTTAGCAGGTGGCATGTCAGGGTTTaGACCCACATGCATCTCTGTCAGCAGCTCATGCCT +
Preference number: 6 (lower is better)
Translates to: AHGAVSRWHVRV*THMHLCQQLMP
Trigger: AGGCATGAGCTGCTGACAGAGATGCATGTGGGTTCAAACCCTGACATGCCACCTGCTAACTGCGCCATGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574162.5
CDS GCA 72 bp AAGAGCGGCGGTGAGAGAAAGTCTCGAAGCTCTTCTTaGCATGGTAGGATCCCATGCCGCTGTTCCCTTGTC +
Preference number: 6 (lower is better)
Translates to: KSGGERKSRSSS*HGRIPCRCSLV
Trigger: GACAAGGGAACAGCGGCATGGGATCCTACCATGGCAAGAAGAGCTTCGAGACTTTCTCTCACCGCCGCTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468746.5
CDS CCA 72 bp TTCTTTGACACAGCCTCTCCCGGTAACTGGGGCTCCTaGAACGGCAAGAGCCAAGAGGGGACGTATTTAAGG +
Preference number: 6 (lower is better)
Translates to: FFDTASPGNWGS*NGKSQEGTYLR
Trigger: CCTTAAATACGTCCCCTCTTGGCTCTTGCCGTTCCAGGAGCCCCAGTTACCGGGAGAGGCTGTGTCAAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479677.6
ENST00000494157.6
CDS CAA 72 bp TCCTTGAGCAGCTCCGTGGTCTCAGGGACACCCCCATaGATTACTGGGTACAGATCCTTGTCCAGGTACTGG +
Preference number: 6 (lower is better)
Translates to: SLSSSVVSGTPP*ITGYRSLSRYW
Trigger: CCAGTACCTGGACAAGGATCTGTACCCAGTAATCAATGGGGGTGTCCCTGAGACCACGGAGCTGCTCAAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000225740.11
ENST00000395555.7
ENST00000426645.2
ENST00000439102.6
ENST00000444455.5
ENST00000457500.6
ENST00000468746.5
ENST00000479677.6
ENST00000485472.3
ENST00000494157.6
CDS CAA 72 bp AAAAAGCGCTGGTTTCTTGGCAGAGCTGAACCAGGCTaGGTGTGTAAACCACGCGTGCCACACCTGGGAGAC +
Preference number: 6 (lower is better)
Translates to: KKRWFLGRAEPG*VCKPRVPHLGD
Trigger: GTCTCCCAGGTGTGGCACGCGTGGTTTACACACCAAGCCTGGTTCAGCTCTGCCAAGAAACCAGCGCTTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439102.6
CDS CAA 72 bp AGAGGGGACGTATTTAAGGACCCTGCTTCCCGTCCATaGAGCCCTTGGAGTTCCTGCCCAGGAAGTTTGCGT +
Preference number: 6 (lower is better)
Translates to: RGDVFKDPASRP*SPWSSCPGSLR
Trigger: ACGCAAACTTCCTGGGCAGGAACTCCAAGGGCTCAATGGACGGGAAGCAGGGTCCTTAAATACGTCCCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494157.6
CDS CCA 72 bp GAATTCTATAGGAAGGGACTTCCCTGGGCTCGGCCTTaGGGAAAATGGCCTTTCCGCTGGAAGGTCCACTTT +
Preference number: 6 (lower is better)
Translates to: EFYRKGLPWARP*GKWPFRWKVHF
Trigger: AAAGTGGACCTTCCAGCGGAAAGGCCATTTTCCCCAAGGCCGAGCCCAGGGAAGTCCCTTCCTATAGAATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457500.6
CDS CAA 90 bp CAAGAGCCAAGAGGGGACGTATTTAAGGACCCTGCTTCCCGTCCATaGAGCCCTTGGAGTTCCTGCCCAGGAAGTTTGCGTGACAAGAAA +
Preference number: 6 (lower is better)
Translates to: QEPRGDVFKDPASRP*SPWSSCPGSLRDKK
Trigger: TTTCTTGTCACGCAAACTTCCTGGGCAGGAACTCCAAGGGCTCAATGGACGGGAAGCAGGGTCCTTAAATACGTCCCCTCTTGGCTCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494157.6
CDS CAA 72 bp GGCAGCACAGGCCCGAAGATCTCTTTCAGTGACTTCTaGAGCTTCTCCACAATTTGGTTCTGGATCGAGGGG +
Preference number: 6 (lower is better)
Translates to: GSTGPKISFSDF*SFSTIWFWIEG
Trigger: CCCCTCGATCCAGAACCAAATTGTGGAGAAGCTCAAGAAGTCACTGAAAGAGATCTTCGGGCCTGTGCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395555.7
CDS TCA 72 bp GCAGCACAGGCCCGAAGATCTCTTTCAGTGACTTCTTaGGCTTCTCCACAATTTGGTTCTGGATCGAGGGGT +
Preference number: 6 (lower is better)
Translates to: AAQARRSLSVTS*ASPQFGSGSRG
Trigger: ACCCCTCGATCCAGAACCAAATTGTGGAGAAGCTCAAGAAGTCACTGAAAGAGATCTTCGGGCCTGTGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395555.7
CDS TCA 72 bp GATGGGGGTCTCCAATCCATAAATCTGCTCTCTCGTTaGATAGCTGAGAAGAGGGCCAAGGGTCTGTGTGGT +
Preference number: 6 (lower is better)
Translates to: DGGLQSINLLSR*IAEKRAKGLCG
Trigger: ACCACACAGACCCTTGGCCCTCTTCTCAGCTATTCAACGAGAGAGCAGATTTATGGATTGGAGACCCCCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574162.5
CDS CCA 72 bp CTGAAGCCTCCCCTCCATTGTGTGTCCTCGGGACAGTaGATGGAAGAGTTGTTAGCAAACAAGCACATGTCA +
Preference number: 6 (lower is better)
Translates to: LKPPLHCVSSGQ*MEELLANKHMS
Trigger: TGACATGTGCTTGTTTGCTAACAACTCTTCCATCCACTGTCCCGAGGACACACAATGGAGGGGAGGCTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479677.6
CDS CCA 72 bp GTATTTAAGGACCCTGCTTCCCGTCCATTGAGCCCTTaGAGTTCCTGCCCAGGAAGTTTGCGTGACAAGAAA +
Preference number: 6 (lower is better)
Translates to: VFKDPASRPLSP*SSCPGSLRDKK
Trigger: TTTCTTGTCACGCAAACTTCCTGGGCAGGAACTCCAAGGGCTCAATGGACGGGAAGCAGGGTCCTTAAATAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494157.6
CDS TCA 72 bp CCACTGTTCATGAATTTCCCCCAGGCGATGCGTCTGTaGGAATCCCAGACTGGACTAAATCCAAAAGGTTCC +
Preference number: 6 (lower is better)
Translates to: PLFMNFPQAMRL*ESQTGLNPKGS
Trigger: GGAACCTTTTGGATTTAGTCCAGTCTGGGATTCTCACAGACGCATCGCCTGGGGGAAATTCATGAACAGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487650.2