RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ALDH2 (Homo sapiens)

Ensembl gene IDs: ENSG00000111275

Ensembl transcript IDs: ENST00000261733.7, ENST00000416293.7, ENST00000548536.1, ENST00000549106.1, ENST00000551450.1

Found 532 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCTGCTCGGTCTTGCTATCAAAGGGGTTCCCGACCACCCGAGACTTaGCCCGGGCAACGCTCCGCTCCACAAACTCATCATAGATGTCCT +
Preference number: 1 (lower is better)
Translates to: PARSCYQRGSRPPET*PGQRSAPQTHHRCP
Trigger: AGGACATCTATGATGAGTTTGTGGAGCGGAGCGTTGCCCGGGCCAAGTCTCGGGTGGTCGGGAACCCCTTTGATAGCAAGACCGAGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548536.1
3UTR GCA 90 bp ACAACCACGTTTCCAGTTGCCAAGGCTGGGCCCAGCTTCCATGCTTaGATCAGGAGCGGGAAATTCCACGGAATGATCTGCCCGCACACC +
Preference number: 1 (lower is better)
Translates to: TTTFPVAKAGPSFHA*IRSGKFHGMICPHT
Trigger: GGTGTGCGGGCAGATCATTCCGTGGAATTTCCCGCTCCTGATGCAAGCATGGAAGCTGGGCCCAGCCTTGGCAACTGGAAACGTGGTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548536.1
3UTR GCA 90 bp GAGGGGTGTCTGCTCAGCTACCTTCATCACAACCACGTTTCCAGTTaGCAAGGCTGGGCCCAGCTTCCATGCTTGCATCAGGAGCGGGAA +
Preference number: 1 (lower is better)
Translates to: EGCLLSYLHHNHVSS*QGWAQLPCLHQERE
Trigger: TTCCCGCTCCTGATGCAAGCATGGAAGCTGGGCCCAGCCTTGGCAACTGGAAACGTGGTTGTGATGAAGGTAGCTGAGCAGACACCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548536.1
3UTR GCA 90 bp CATCACAACCACGTTTCCAGTTGCCAAGGCTGGGCCCAGCTTCCATaGTTGCATCAGGAGCGGGAAATTCCACGGAATGATCTGCCCGCA +
Preference number: 1 (lower is better)
Translates to: HHNHVSSCQGWAQLP*LHQEREIPRNDLPA
Trigger: TGCGGGCAGATCATTCCGTGGAATTTCCCGCTCCTGATGCAAGCATGGAAGCTGGGCCCAGCCTTGGCAACTGGAAACGTGGTTGTGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548536.1
3UTR CCA 90 bp CTGCTCAGCTACCTTCATCACAACCACGTTTCCAGTTGCCAAGGCTaGGCCCAGCTTCCATGCTTGCATCAGGAGCGGGAAATTCCACGG +
Preference number: 1 (lower is better)
Translates to: LLSYLHHNHVSSCQG*AQLPCLHQEREIPR
Trigger: CCGTGGAATTTCCCGCTCCTGATGCAAGCATGGAAGCTGGGCCCAGCCTTGGCAACTGGAAACGTGGTTGTGATGAAGGTAGCTGAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548536.1
3UTR CCA 90 bp GTTTGCTGTAGTTTGGGGAGCATATTGAAAACACATTGTTGGCTGTaGGCGGCAAGCCATCCAGGTGCTGAGGCAAGAGACCGAGGGCAC +
Preference number: 1 (lower is better)
Translates to: VCCSLGSILKTHCWL*AASHPGAEARDRGH
Trigger: GTGCCCTCGGTCTCTTGCCTCAGCACCTGGATGGCTTGCCGCCCACAGCCAACAATGTGTTTTCAATATGCTCCCCAAACTACAGCAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR TCA 90 bp TGGAGGCTCTACCCAGAAGCAGCGGCTTTACACCTAATACTCCTGTaGCTGACCCACATCCGAATACCCAGGGAGATTAGGTGGTTCATC +
Preference number: 1 (lower is better)
Translates to: WRLYPEAAALHLILL*LTHIRIPREIRWFI
Trigger: GATGAACCACCTAATCTCCCTGGGTATTCGGATGTGGGTCAGTCACAGGAGTATTAGGTGTAAAGCCGCTGCTTCTGGGTAGAGCCTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR CCA 90 bp AGAGGAGTTTGCTGTAGTTTGGGGAGCATATTGAAAACACATTGTTaGCTGTGGGCGGCAAGCCATCCAGGTGCTGAGGCAAGAGACCGA +
Preference number: 1 (lower is better)
Translates to: RGVCCSLGSILKTHC*LWAASHPGAEARDR
Trigger: TCGGTCTCTTGCCTCAGCACCTGGATGGCTTGCCGCCCACAGCCAACAATGTGTTTTCAATATGCTCCCCAAACTACAGCAAACTCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR CCA 90 bp CATCGTTGGAAGGACACCGGTGGGAGGGGCTGTCCTGTTAATTCTTaGAGAAATAGCGTCGTAGTTCAATGTATGTCCCACAAGGTGGCG +
Preference number: 1 (lower is better)
Translates to: HRWKDTGGRGCPVNS*RNSVVVQCMSHKVA
Trigger: CGCCACCTTGTGGGACATACATTGAACTACGACGCTATTTCTCCAAGAATTAACAGGACAGCCCCTCCCACCGGTGTCCTTCCAACGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR CCA 90 bp TCTTTGTCTTGTGTCTTTATTTCTACAATCTCTCGTCTCCGCACATaGGGAGAAAAACCCACCGACCCTGTGGGGCTGGTCCCTACAGTT +
Preference number: 1 (lower is better)
Translates to: SLSCVFISTISRLRT*GEKPTDPVGLVPTV
Trigger: AACTGTAGGGACCAGCCCCACAGGGTCGGTGGGTTTTTCTCCCCATGTGCGGAGACGAGAGATTGTAGAAATAAAGACACAAGACAAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR GCA 90 bp AAGCTCTTGAGAAGGCTCCAAGTACAGTTCCTGGCATGTAGTGGGTaGACAGTTAATACTTCTTGGGGCCACAGGATTGGGCATCAGATT +
Preference number: 1 (lower is better)
Translates to: KLLRRLQVQFLACSG*TVNTSWGHRIGHQI
Trigger: AATCTGATGCCCAATCCTGTGGCCCCAAGAAGTATTAACTGTGCACCCACTACATGCCAGGAACTGTACTTGGAGCCTTCTCAAGAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR CCA 90 bp TTACACTGCCTGCCAAATGTACAGCCAAATTGTATGCAACATCGTTaGAAGGACACCGGTGGGAGGGGCTGTCCTGTTAATTCTTGGAGA +
Preference number: 1 (lower is better)
Translates to: LHCLPNVQPNCMQHR*KDTGGRGCPVNSWR
Trigger: TCTCCAAGAATTAACAGGACAGCCCCTCCCACCGGTGTCCTTCCAACGATGTTGCATACAATTTGGCTGTACATTTGGCAGGCAGTGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR TCA 90 bp CTGACCCACATCCGAATACCCAGGGAGATTAGGTGGTTCATCACCTaGGAGCTTTGTTTTTACTTCAGACAGCTGCTTAAGGTTCTAATG +
Preference number: 1 (lower is better)
Translates to: LTHIRIPREIRWFIT*ELCFYFRQLLKVLM
Trigger: CATTAGAACCTTAAGCAGCTGTCTGAAGTAAAAACAAAGCTCTCAGGTGATGAACCACCTAATCTCCCTGGGTATTCGGATGTGGGTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR CCA 90 bp AGTGGTCACGCTCCTAGTCTGCCTTCATGTTCCATCCTGTACACCTaGCTCTGCCTTTTAGATAACAGTAGCAAAATTAGTGAAAGTACT +
Preference number: 1 (lower is better)
Translates to: SGHAPSLPSCSILYT*LCLLDNSSKISEST
Trigger: AGTACTTTCACTAATTTTGCTACTGTTATCTAAAAGGCAGAGCCAGGTGTACAGGATGGAACATGAAGGCAGACTAGGAGCGTGACCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR TCA 90 bp TTCTTTCAATTAATTCATAAACAGAAAGGGGGAAATGTAGAGAGCTaGATGCCCATGGGTTGTGACCAACTCAGCATTCCACTGAGGCTA +
Preference number: 1 (lower is better)
Translates to: FFQLIHKQKGGNVES*MPMGCDQLSIPLRL
Trigger: TAGCCTCAGTGGAATGCTGAGTTGGTCACAACCCATGGGCATTCAGCTCTCTACATTTCCCCCTTTCTGTTTATGAATTAATTGAAAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR CCA 90 bp CATATTTGTGTAACCAACTTAGAATATAACCAAAGTGAGTATCCATaGGACCTTGTGAAAGCCCATTTGCAGGGAGCTTGCACATCCAAC +
Preference number: 1 (lower is better)
Translates to: HICVTNLEYNQSEYP*DLVKAHLQGACTSN
Trigger: GTTGGATGTGCAAGCTCCCTGCAAATGGGCTTTCACAAGGTCCCATGGATACTCACTTTGGTTATATTCTAAGTTGGTTACACAAATATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR GCA 90 bp TGTTTTATCCTTCACAGAATAAGCCAAATGAGAGTTGGAAGTGACTaGAGAGATTGTGAGGAAATGGAAGCTCAGAAGTTGTGTGGTTTG +
Preference number: 1 (lower is better)
Translates to: CFILHRISQMRVGSD*RDCEEMEAQKLCGL
Trigger: CAAACCACACAACTTCTGAGCTTCCATTTCCTCACAATCTCTGCAGTCACTTCCAACTCTCATTTGGCTTATTCTGTGAAGGATAAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR TCA 90 bp CCTTCTCTCTATATAGATTTGCCTGTTCTGGATATTTCCTATAAGTaGAATCATACAGTCCTTCTCCTTTTGTGTCTGGCTTCTTTCACT +
Preference number: 1 (lower is better)
Translates to: PSLYIDLPVLDISYK*NHTVLLLLCLASFT
Trigger: AGTGAAAGAAGCCAGACACAAAAGGAGAAGGACTGTATGATTTCACTTATAGGAAATATCCAGAACAGGCAAATCTATATAGAGAGAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR-3UTR TCA 90 bp CCGAGACTTGGCCCGGGCAACGCTCCGCTCCACAAACTCATCATAGATGTCCTCCAGCCGGCCCCTGTGTaGTGCGTCCATGCGGCGCCA +
Preference number: 2 (lower is better)
Translates to: PRLGPGNAPLHKLIIDVLQPAPV*CVHAAP
Trigger: TGGCGCCGCATGGACGCATCACACAGGGGCCGGCTG...GAGGACATCTATGATGAGTTTGTGGAGCGGAGCGTTGCCCGGGCCAAGTCTCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548536.1
3UTR-3UTR TCA 90 bp TGTCCAGGGTCTCCAAGGCCGCCAGGTAGGTCCGGTCCCGCTCGATCAGATCGGCTCCAGTGGACGGATTaGCGGTGGGGAATGTTTTCC +
Preference number: 2 (lower is better)
Translates to: CPGSPRPPGRSGPARSDRLQWTD*RWGMFS
Trigger: GGAAAACATTCCCCACCGTCAATCCGTCCACTGGAG...CCGATCTGATCGAGCGGGACCGGACCTACCTGGCGGCCTTGGAGACCCTGGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548536.1
3UTR-3UTR TCA 90 bp GCAGTTGACCCACACAGTGCCCGCCTGGAGGGCCTGGGACAGGTAATTGGCCTTAGCACTGGCCCTGGTTaGAGAACAGGGCGAAGTGGG +
Preference number: 2 (lower is better)
Translates to: AVDPHSARLEGLGQVIGLSTGPG*RTGRSG
Trigger: CCCACTTCGCCCTGTTCTTCAACCAGGGCCAGTGCT...AAGGCCAATTACCTGTCCCAGGCCCTCCAGGCGGGCACTGTGTGGGTCAACTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548536.1
3UTR-3UTR CCA 90 bp CACTTCAGTGTATGCCTGCAGCCCGTACTCGCCCAACTCCCGGCCACTCCCCGATCCAGTTGCCAAGGCTaGGCCCAGCTTCCATGCTTG +
Preference number: 2 (lower is better)
Translates to: HFSVCLQPVLAQLPATPRSSCQG*AQLPCL
Trigger: CAAGCATGGAAGCTGGGCCCAGCCTTGGCAACTGGA...TCGGGGAGTGGCCGGGAGTTGGGCGAGTACGGGCTGCAGGCATACACTGAAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548536.1
3UTR CAA 90 bp ACCTGGATTACGCGGCCAATCTCAGTGGAGCCTGTGAATGCCACTTaGTCCACATCCTCATGGGAGGCAATGGCGGCCCCAGCCGTGGGG +
Preference number: 2 (lower is better)
Translates to: TWITRPISVEPVNAT*STSSWEAMAAPAVG
Trigger: CCCCACGGCTGGGGCCGCCATTGCCTCCCATGAGGATGTGGACAAAGTGGCATTCACAGGCTCCACTGAGATTGGCCGCGTAATCCAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548536.1
3UTR-3UTR GCA 90 bp AAAGGGGTTCCCGACCACCCGAGACTTGGCCCGGGCAACGCTCCGCTCCACAAAAACCACGTTTCCAGTTaGCAAGGCTGGGCCCAGCTT +
Preference number: 2 (lower is better)
Translates to: KGVPDHPRLGPGNAPLHKNHVSS*QGWAQL
Trigger: AAGCTGGGCCCAGCCTTGGCAACTGGAAACGTGGTT...TTTGTGGAGCGGAGCGTTGCCCGGGCCAAGTCTCGGGTGGTCGGGAACCCCTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548536.1
3UTR-3UTR CCA 90 bp CAGTGTATGCCTGCAGCCCGTACTCGCCCAACTCCCGGCCACTCCCCGACATCTGGGATGGTTTTCCCGTaGTACTTATCAGCCCAGCCG +
Preference number: 2 (lower is better)
Translates to: QCMPAARTRPTPGHSPTSGMVFP*YLSAQP
Trigger: CGGCTGGGCTGATAAGTACCACGGGAAAACCATCCC...AGATGTCGGGGAGTGGCCGGGAGTTGGGCGAGTACGGGCTGCAGGCATACACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548536.1
3UTR-3UTR CCA 90 bp CACTTCAGTGTATGCCTGCAGCCCGTACTCGCCCAACTCCCGGCCACTCCCCGAAGAAGTCTCCGTCAATaGGGATGGTTTTCCCGTGGT +
Preference number: 2 (lower is better)
Translates to: HFSVCLQPVLAQLPATPRRSLRQ*GWFSRG
Trigger: ACCACGGGAAAACCATCCCCATTGACGGAGACTTCT...TCGGGGAGTGGCCGGGAGTTGGGCGAGTACGGGCTGCAGGCATACACTGAAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548536.1
3UTR CAA 90 bp CACAACCACGTTTCCAGTTGCCAAGGCTGGGCCCAGCTTCCATGCTaGCATCAGGAGCGGGAAATTCCACGGAATGATCTGCCCGCACAC +
Preference number: 2 (lower is better)
Translates to: HNHVSSCQGWAQLPC*HQEREIPRNDLPAH
Trigger: GTGTGCGGGCAGATCATTCCGTGGAATTTCCCGCTCCTGATGCAAGCATGGAAGCTGGGCCCAGCCTTGGCAACTGGAAACGTGGTTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548536.1
3UTR-3UTR CCA 90 bp CCGAGACTTGGCCCGGGCAACGCTCCGCTCCACAAACTCATCATAGATGTCCTCCTCCCAGCAGCAACCTaGATTACGCGGCCAATCTCA +
Preference number: 2 (lower is better)
Translates to: PRLGPGNAPLHKLIIDVLLPAAT*ITRPIS
Trigger: TGAGATTGGCCGCGTAATCCAGGTTGCTGCTGGGAG...GAGGACATCTATGATGAGTTTGTGGAGCGGAGCGTTGCCCGGGCCAAGTCTCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548536.1
3UTR-3UTR GCA 90 bp CCTGGGCTATGGATTCCTGTTAATCTGTCCCAGCCTTGGGCTACCACACCTGCTTCTCTGTGCCCTCTGTaGAGCCACAAGTGGAGGCTC +
Preference number: 2 (lower is better)
Translates to: PGLWIPVNLSQPWATTPASLCPL*SHKWRL
Trigger: GAGCCTCCACTTGTGGCTGCACAGAGGGCACAGAGA...AGCAGGTGTGGTAGCCCAAGGCTGGGACAGATTAACAGGAATCCATAGCCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR-3UTR GCA 90 bp GTCCAAATCCTTTGTGAAGACAGCTGCGGCCAGCCCGTACGTGGAATTGTTGGCTGGGCCCAGCTTCCATaGTTGCATCAGGAGCGGGAA +
Preference number: 2 (lower is better)
Translates to: VQILCEDSCGQPVRGIVGWAQLP*LHQERE
Trigger: TTCCCGCTCCTGATGCAAGCATGGAAGCTGGGCCCA...GCCAACAATTCCACGTACGGGCTGGCCGCAGCTGTCTTCACAAAGGATTTGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548536.1
3UTR-3UTR CCA 90 bp GTGGTGCTGTGCTTCAGTGGTCACGCTCCTAGTCTGCCTTCATGTTCCATCCTGTGTCTATCTCTGCCTTaGCTGCCAGGCAGGGAAGGG +
Preference number: 2 (lower is better)
Translates to: VVLCFSGHAPSLPSCSILCLSLP*LPGREG
Trigger: CCCTTCCCTGCCTGGCAGCCAAGGCAGAGATAGACA...CAGGATGGAACATGAAGGCAGACTAGGAGCGTGACCACTGAAGCACAGCACCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR-3UTR CCA 90 bp GTCCAAATCCTTTGTGAAGACAGCTGCGGCCAGCCCGTACGTGGAATTGTTGGCTTGTCCACATCCTCATaGGAGGCAATGGCGGCCCCA +
Preference number: 2 (lower is better)
Translates to: VQILCEDSCGQPVRGIVGLSTSS*EAMAAP
Trigger: TGGGGCCGCCATTGCCTCCCATGAGGATGTGGACAA...GCCAACAATTCCACGTACGGGCTGGCCGCAGCTGTCTTCACAAAGGATTTGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548536.1
3UTR-3UTR TCA 90 bp GTGGTGCTGTGCTTCAGTGGTCACGCTCCTAGTCTGCCTTCATGTTCCATCCTGAGCTACTCAGGAGGCTaGGGCAGGAGAATTGCTCCA +
Preference number: 2 (lower is better)
Translates to: VVLCFSGHAPSLPSCSILSYSGG*GRRIAP
Trigger: TGGAGCAATTCTCCTGCCTCAGCCTCCTGAGTAGCT...CAGGATGGAACATGAAGGCAGACTAGGAGCGTGACCACTGAAGCACAGCACCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR-3UTR TCA 90 bp CTATGGATTCCTGTTAATCTGTCCCAGCCTTGGGCTACCACACCTGCTTTGCACAAGCCATCCAGGTGCTaGGGCAAGAGACCGAGGGCA +
Preference number: 2 (lower is better)
Translates to: LWIPVNLSQPWATTPALHKPSRC*GKRPRA
Trigger: TGCCCTCGGTCTCTTGCCTCAGCACCTGGATGGCTT...GTGCAAAGCAGGTGTGGTAGCCCAAGGCTGGGACAGATTAACAGGAATCCATAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR-3UTR TCA 90 bp GTCCAAATCCTTTGTGAAGACAGCTGCGGCCAGCCCGTACGTGGAATTGTTGGCCAGCTACCTGACAGATaGCCTCTCCAGTGGACGGAT +
Preference number: 2 (lower is better)
Translates to: VQILCEDSCGQPVRGIVGQLPDR*PLQWTD
Trigger: ATCCGTCCACTGGAGAGGTCATCTGTCAGGTAGCTG...GCCAACAATTCCACGTACGGGCTGGCCGCAGCTGTCTTCACAAAGGATTTGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548536.1
3UTR-3UTR GCA 90 bp CAACATCGTTGGAAGGACACCGGTGGGAGGGGCTGTCCTGTTAATTCTTGGAGACCAAGATCACGTCACTaGACTCCAGCCTGGGCGACA +
Preference number: 2 (lower is better)
Translates to: QHRWKDTGGRGCPVNSWRPRSRH*TPAWAT
Trigger: TGTCGCCCAGGCTGGAGTGCAGTGACGTGATCTTGG...TCTCCAAGAATTAACAGGACAGCCCCTCCCACCGGTGTCCTTCCAACGATGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR-3UTR TCA 90 bp CTATGGATTCCTGTTAATCTGTCCCAGCCTTGGGCTACCACACCTGCTTTGCACCTGCCAATCAGAAAATaGGAGCTGCCCAGCCTGGCC +
Preference number: 2 (lower is better)
Translates to: LWIPVNLSQPWATTPALHLPIRK*ELPSLA
Trigger: GGCCAGGCTGGGCAGCTCTCATTTTCTGATTGGCAG...GTGCAAAGCAGGTGTGGTAGCCCAAGGCTGGGACAGATTAACAGGAATCCATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR-3UTR TCA 90 bp GGTGTCTGCTCAGCTACCTTCATCACAACCACGTTTCCAGTTGCCAAGGCTGGGCCACCAGGTAGGAGATaGCATAGGGCTTGCCATTGT +
Preference number: 2 (lower is better)
Translates to: GVCSATFITTTFPVAKAGPPGRR*HRACHC
Trigger: ACAATGGCAAGCCCTATGTCATCTCCTACCTGGTGG...CCCAGCCTTGGCAACTGGAAACGTGGTTGTGATGAAGGTAGCTGAGCAGACACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548536.1
3UTR-3UTR GCA 90 bp GTCCAAATCCTTTGTGAAGACAGCTGCGGCCAGCCCGTACGTGGAATTGTTGGCCCTTGGCGATGGTCATaGCATCCTGCACATCTCCAA +
Preference number: 2 (lower is better)
Translates to: VQILCEDSCGQPVRGIVGPWRWS*HPAHLQ
Trigger: TTGGAGATGTGCAGGATGGCATGACCATCGCCAAGG...GCCAACAATTCCACGTACGGGCTGGCCGCAGCTGTCTTCACAAAGGATTTGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548536.1
3UTR-3UTR CCA 90 bp CAACATCGTTGGAAGGACACCGGTGGGAGGGGCTGTCCTGTTAATTCTTGGAGATCTCGTCTCCGCACATaGGGAGAAAAACCCACCGAC +
Preference number: 2 (lower is better)
Translates to: QHRWKDTGGRGCPVNSWRSRLRT*GEKPTD
Trigger: GTCGGTGGGTTTTTCTCCCCATGTGCGGAGACGAGA...TCTCCAAGAATTAACAGGACAGCCCCTCCCACCGGTGTCCTTCCAACGATGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR-3UTR GCA 90 bp CCTGGGCTATGGATTCCTGTTAATCTGTCCCAGCCTTGGGCTACCACACCTGCTGTAGAGACTGCTGATTaGCCTCTTGAACCCAGCTTC +
Preference number: 2 (lower is better)
Translates to: PGLWIPVNLSQPWATTPAVETAD*PLEPSF
Trigger: GAAGCTGGGTTCAAGAGGGCAATCAGCAGTCTCTAC...AGCAGGTGTGGTAGCCCAAGGCTGGGACAGATTAACAGGAATCCATAGCCCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR CAA 90 bp TCCAAATCCTTTGTGAAGACAGCTGCGGCCAGCCCGTACGTGGAATaGTTGGCTCTCCCAACAACCTCCTCTATGGTCTTGAACTTCAGG +
Preference number: 2 (lower is better)
Translates to: SKSFVKTAAASPYVE*LALPTTSSMVLNFR
Trigger: CCTGAAGTTCAAGACCATAGAGGAGGTTGTTGGGAGAGCCAACAATTCCACGTACGGGCTGGCCGCAGCTGTCTTCACAAAGGATTTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548536.1
3UTR-3UTR TCA 90 bp CCTGGGCTATGGATTCCTGTTAATCTGTCCCAGCCTTGGGCTACCACACCTGCTTTGAGTCCAGGAGTTTaGAAACAGCCTGGGCAACAT +
Preference number: 2 (lower is better)
Translates to: PGLWIPVNLSQPWATTPALSPGV*KQPGQH
Trigger: ATGTTGCCCAGGCTGTTTTCAAACTCCTGGACTCAA...AGCAGGTGTGGTAGCCCAAGGCTGGGACAGATTAACAGGAATCCATAGCCCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR CAA 90 bp GTCTTTGATTCCCTCATTACACTGCCTGCCAAATGTACAGCCAAATaGTATGCAACATCGTTGGAAGGACACCGGTGGGAGGGGCTGTCC +
Preference number: 2 (lower is better)
Translates to: VFDSLITLPAKCTAK*YATSLEGHRWEGLS
Trigger: GGACAGCCCCTCCCACCGGTGTCCTTCCAACGATGTTGCATACAATTTGGCTGTACATTTGGCAGGCAGTGTAATGAGGGAATCAAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR CAA 90 bp AAATCCTTTGTGAAGACAGCTGCGGCCAGCCCGTACGTGGAATTGTaGGCTCTCCCAACAACCTCCTCTATGGTCTTGAACTTCAGGATC +
Preference number: 2 (lower is better)
Translates to: KSFVKTAAASPYVEL*ALPTTSSMVLNFRI
Trigger: GATCCTGAAGTTCAAGACCATAGAGGAGGTTGTTGGGAGAGCCAACAATTCCACGTACGGGCTGGCCGCAGCTGTCTTCACAAAGGATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548536.1
3UTR-3UTR TCA 90 bp CTATGGATTCCTGTTAATCTGTCCCAGCCTTGGGCTACCACACCTGCTTTGCACAAGCAAGGAGCCCCCTaGCCCCTTCTTCCAAATATA +
Preference number: 2 (lower is better)
Translates to: LWIPVNLSQPWATTPALHKQGAP*PLLPNI
Trigger: TATATTTGGAAGAAGGGGTCAGGGGGCTCCTTGCTT...GTGCAAAGCAGGTGTGGTAGCCCAAGGCTGGGACAGATTAACAGGAATCCATAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR-3UTR CCA 90 bp CAGCTCTGTTTTATCCTTCACAGAATAAGCCAAATGAGAGTTGGAAGTGACTGCAGCCTCCCGATCAGCTaGGACTACAGGCGCCCACCA +
Preference number: 2 (lower is better)
Translates to: QLCFILHRISQMRVGSDCSLPIS*DYRRPP
Trigger: TGGTGGGCGCCTGTAGTCCCAGCTGATCGGGAGGCT...GCAGTCACTTCCAACTCTCATTTGGCTTATTCTGTGAAGGATAAAACAGAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR-3UTR TCA 90 bp TCCGAATACCCAGGGAGATTAGGTGGTTCATCACCTGAGAGCTTTGTTTTTACTAGCAGGAGGATCATTTaGGCCCAGGAGGTCGAGGCA +
Preference number: 2 (lower is better)
Translates to: SEYPGRLGGSSPESFVFTSRRII*AQEVEA
Trigger: TGCCTCGACCTCCTGGGCTCAAATGATCCTCCTGCT...AGTAAAAACAAAGCTCTCAGGTGATGAACCACCTAATCTCCCTGGGTATTCGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR-3UTR TCA 90 bp TTCCATCAATGGCTGAGGGAGGAAGCTTGCATGATTCTTATGAGTTCTTCTGAGGGAAATTCCACGGAATaGTCTGCCCGCACACCCCCA +
Preference number: 2 (lower is better)
Translates to: FHQWLREEACMILMSSSEGNSTE*SARTPP
Trigger: TGGGGGTGTGCGGGCAGATCATTCCGTGGAATTTCC...CTCAGAAGAACTCATAAGAATCATGCAAGCTTCCTCCCTCAGCCATTGATGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548536.1
3UTR-3UTR GCA 90 bp CTCTGTTTTATCCTTCACAGAATAAGCCAAATGAGAGTTGGAAGTGACTGCAGATATCTCTGCCTTGGCTaGCAGGCAGGGAAGGGCCCC +
Preference number: 2 (lower is better)
Translates to: LCFILHRISQMRVGSDCRYLCLG*QAGKGP
Trigger: GGGGCCCTTCCCTGCCTGGCAGCCAAGGCAGAGATA...TCTGCAGTCACTTCCAACTCTCATTTGGCTTATTCTGTGAAGGATAAAACAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR-3UTR GCA 90 bp CCTGGGCTATGGATTCCTGTTAATCTGTCCCAGCCTTGGGCTACCACACCTGCTCCTCATTACACTGCCTaGCAAATGTACAGCCAAATT +
Preference number: 2 (lower is better)
Translates to: PGLWIPVNLSQPWATTPAPHYTA*QMYSQI
Trigger: AATTTGGCTGTACATTTGGCAGGCAGTGTAATGAGG...AGCAGGTGTGGTAGCCCAAGGCTGGGACAGATTAACAGGAATCCATAGCCCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR-3UTR GCA 90 bp CTATGGATTCCTGTTAATCTGTCCCAGCCTTGGGCTACCACACCTGCTTTGCACTCAGAAAATGAGAGCTaGCCAGCCTGGCCTTACATT +
Preference number: 2 (lower is better)
Translates to: LWIPVNLSQPWATTPALHSENES*PAWPYI
Trigger: AATGTAAGGCCAGGCTGGGCAGCTCTCATTTTCTGA...GTGCAAAGCAGGTGTGGTAGCCCAAGGCTGGGACAGATTAACAGGAATCCATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR CAA 90 bp CTAAATCCCGAGTTAAGAGGAGTTTGCTGTAGTTTGGGGAGCATATaGAAAACACATTGTTGGCTGTGGGCGGCAAGCCATCCAGGTGCT +
Preference number: 2 (lower is better)
Translates to: LNPELRGVCCSLGSI*KTHCWLWAASHPGA
Trigger: AGCACCTGGATGGCTTGCCGCCCACAGCCAACAATGTGTTTTCAATATGCTCCCCAAACTACAGCAAACTCCTCTTAACTCGGGATTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR CAA 90 bp GTCCAACAGGGATTAGGTCCACGTCACCTTTTAAACAACCAGCTCTaGAGTGAACTCATTACCATGGGGGAGGACACCAAGCCATTCATG +
Preference number: 2 (lower is better)
Translates to: VQQGLGPRHLLNNQL*SELITMGEDTKPFM
Trigger: CATGAATGGCTTGGTGTCCTCCCCCATGGTAATGAGTTCACTCAAGAGCTGGTTGTTTAAAAGGTGACGTGGACCTAATCCCTGTTGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR-3UTR TCA 90 bp CAACATCGTTGGAAGGACACCGGTGGGAGGGGCTGTCCTGTTAATTCTTGGAGAAGGTGGTTCATCACCTaGGAGCTTTGTTTTTACTTC +
Preference number: 2 (lower is better)
Translates to: QHRWKDTGGRGCPVNSWRRWFIT*ELCFYF
Trigger: GAAGTAAAAACAAAGCTCTCAGGTGATGAACCACCT...TCTCCAAGAATTAACAGGACAGCCCCTCCCACCGGTGTCCTTCCAACGATGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR-3UTR TCA 90 bp TTCCATCAATGGCTGAGGGAGGAAGCTTGCATGATTCTTATGAGTTCTTCTGAGGTAGCCACCAAAGGGTaGCTGGGCTCCAAACACATC +
Preference number: 2 (lower is better)
Translates to: FHQWLREEACMILMSSSEVATKG*LGSKHI
Trigger: GATGTGTTTGGAGCCCAGTCACCCTTTGGTGGCTAC...CTCAGAAGAACTCATAAGAATCATGCAAGCTTCCTCCCTCAGCCATTGATGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548536.1
3UTR-3UTR CCA 90 bp AAAATTAACACTGAGTTACAAACTGAAGTGGCATTGTTGAAATCCACGGCTCTAGCTGGTCCCTACAGTTaGCCGGGCACGGTGGCTCAC +
Preference number: 2 (lower is better)
Translates to: KINTELQTEVALLKSTALAGPYS*PGTVAH
Trigger: GTGAGCCACCGTGCCCGGCCAACTGTAGGGACCAGC...TAGAGCCGTGGATTTCAACAATGCCACTTCAGTTTGTAACTCAGTGTTAATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR-3UTR CCA 90 bp CCTGGGCTATGGATTCCTGTTAATCTGTCCCAGCCTTGGGCTACCACACCTGCTCATAAATGCAGAATGTaGGCAAACTCACTTCTGCTT +
Preference number: 2 (lower is better)
Translates to: PGLWIPVNLSQPWATTPAHKCRM*ANSLLL
Trigger: AAGCAGAAGTGAGTTTGCCCACATTCTGCATTTATG...AGCAGGTGTGGTAGCCCAAGGCTGGGACAGATTAACAGGAATCCATAGCCCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR-3UTR TCA 90 bp GTGGTGTTTCACATGATGGTAGAGACTGCTGATTGCCCTCTTGAACCCAGCTTCGTTTTTACTGAGAACTaGATTGGGCACAGTGGCTCA +
Preference number: 2 (lower is better)
Translates to: VVFHMMVETADCPLEPSFVFTEN*IGHSGS
Trigger: TGAGCCACTGTGCCCAATTCAGTTCTCAGTAAAAAC...GAAGCTGGGTTCAAGAGGGCAATCAGCAGTCTCTACCATCATGTGAAACACCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR-3UTR TCA 90 bp CAACATCGTTGGAAGGACACCGGTGGGAGGGGCTGTCCTGTTAATTCTTGGAGAAAGAGGTCTGGTTACTaGAGATACAGATCTCACTTA +
Preference number: 2 (lower is better)
Translates to: QHRWKDTGGRGCPVNSWRKRSGY*RYRSHL
Trigger: TAAGTGAGATCTGTATCTTCAGTAACCAGACCTCTT...TCTCCAAGAATTAACAGGACAGCCCCTCCCACCGGTGTCCTTCCAACGATGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR-3UTR GCA 90 bp CAGCTCTGTTTTATCCTTCACAGAATAAGCCAAATGAGAGTTGGAAGTGACTGCACTCCCAGGCTGGAGTaGAGTGGCATGATCTCCACT +
Preference number: 2 (lower is better)
Translates to: QLCFILHRISQMRVGSDCTPRLE*SGMIST
Trigger: AGTGGAGATCATGCCACTGCACTCCAGCCTGGGAGT...GCAGTCACTTCCAACTCTCATTTGGCTTATTCTGTGAAGGATAAAACAGAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR-3UTR CCA 90 bp TCCGAATACCCAGGGAGATTAGGTGGTTCATCACCTGAGAGCTTTGTTTTTACTGGTCTCACTCTGGGCTaGAGTGAAGTGGTGCAATCA +
Preference number: 2 (lower is better)
Translates to: SEYPGRLGGSSPESFVFTGLTLG*SEVVQS
Trigger: TGATTGCACCACTTCACTCCAGCCCAGAGTGAGACC...AGTAAAAACAAAGCTCTCAGGTGATGAACCACCTAATCTCCCTGGGTATTCGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR-3UTR TCA 90 bp CAACATCGTTGGAAGGACACCGGTGGGAGGGGCTGTCCTGTTAATTCTTGGAGAATTCTAGAACTTTCTTaGCCCAAGAGATTTTGTAGG +
Preference number: 2 (lower is better)
Translates to: QHRWKDTGGRGCPVNSWRILELS*PKRFCR
Trigger: CCTACAAAATCTCTTGGGTCAAGAAAGTTCTAGAAT...TCTCCAAGAATTAACAGGACAGCCCCTCCCACCGGTGTCCTTCCAACGATGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR-3UTR TCA 90 bp CTCTGTTTTATCCTTCACAGAATAAGCCAAATGAGAGTTGGAAGTGACTGCAGAGAAGCTTCTCCGGGCTaGAGGAAAAGCTCTCTGTGC +
Preference number: 2 (lower is better)
Translates to: LCFILHRISQMRVGSDCREASPG*RKSSLC
Trigger: GCACAGAGAGCTTTTCCTTCAGCCCGGAGAAGCTTC...TCTGCAGTCACTTCCAACTCTCATTTGGCTTATTCTGTGAAGGATAAAACAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR-3UTR GCA 90 bp AAAATTAACACTGAGTTACAAACTGAAGTGGCATTGTTGAAATCCACGGCTCTAAGGCGTGAGCCACTGTaGCCGGCCTTTGCCAGGTAT +
Preference number: 2 (lower is better)
Translates to: KINTELQTEVALLKSTALRREPL*PAFARY
Trigger: ATACCTGGCAAAGGCCGGGCACAGTGGCTCACGCCT...TAGAGCCGTGGATTTCAACAATGCCACTTCAGTTTGTAACTCAGTGTTAATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR-3UTR GCA 90 bp CTATGGATTCCTGTTAATCTGTCCCAGCCTTGGGCTACCACACCTGCTTTGCACGGTCTTTATCTTTATTaGTGTGTTCGTCCCCTTTTG +
Preference number: 2 (lower is better)
Translates to: LWIPVNLSQPWATTPALHGLYLY*CVRPLL
Trigger: CAAAAGGGGACGAACACAGCAATAAAGATAAAGACC...GTGCAAAGCAGGTGTGGTAGCCCAAGGCTGGGACAGATTAACAGGAATCCATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR-3UTR GCA 90 bp CCTGGGCTATGGATTCCTGTTAATCTGTCCCAGCCTTGGGCTACCACACCTGCTACTGTTTATCATAAATaGAGAATGTGGGCAAACTCA +
Preference number: 2 (lower is better)
Translates to: PGLWIPVNLSQPWATTPATVYHK*RMWANS
Trigger: TGAGTTTGCCCACATTCTGCATTTATGATAAACAGT...AGCAGGTGTGGTAGCCCAAGGCTGGGACAGATTAACAGGAATCCATAGCCCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR-3UTR TCA 90 bp ATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCATGATTCTTATGGAATGTTTTCCTGCTaGCGGCATCGTGCCATTCAT +
Preference number: 2 (lower is better)
Translates to: ILLNFPSMAEGGSLHDSYGMFSC*RHRAIH
Trigger: ATGAATGGCACGATGCCGTCAGCAGGAAAACATTCC...ATAAGAATCATGCAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548536.1
3UTR-3UTR GCA 90 bp CTCTGTTTTATCCTTCACAGAATAAGCCAAATGAGAGTTGGAAGTGACTGCAGAAGGCGTGAGCCACCATaGCCACCTTCCTTTGGTTAT +
Preference number: 2 (lower is better)
Translates to: LCFILHRISQMRVGSDCRRREPP*PPSFGY
Trigger: ATAACCAAAGGAAGGTGGGCATGGTGGCTCACGCCT...TCTGCAGTCACTTCCAACTCTCATTTGGCTTATTCTGTGAAGGATAAAACAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR-3UTR GCA 90 bp GTGGTGTTTCACATGATGGTAGAGACTGCTGATTGCCCTCTTGAACCCAGCTTCGCCAGCCACCATGACTaGCTAATTTGTGTATTTTTA +
Preference number: 2 (lower is better)
Translates to: VVFHMMVETADCPLEPSFASHHD*LICVFL
Trigger: TAAAAATACACAAATTAGGCAGTCATGGTGGCTGGC...GAAGCTGGGTTCAAGAGGGCAATCAGCAGTCTCTACCATCATGTGAAACACCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR-3UTR GCA 90 bp CTCTGTTTTATCCTTCACAGAATAAGCCAAATGAGAGTTGGAAGTGACTGCAGAGCTGGAGTGAAGTGGTaGAATCACAGCTCACTGCAG +
Preference number: 2 (lower is better)
Translates to: LCFILHRISQMRVGSDCRAGVKW*NHSSLQ
Trigger: CTGCAGTGAGCTGTGATTGCACCACTTCACTCCAGC...TCTGCAGTCACTTCCAACTCTCATTTGGCTTATTCTGTGAAGGATAAAACAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR-3UTR CCA 90 bp CTATGGATTCCTGTTAATCTGTCCCAGCCTTGGGCTACCACACCTGCTTTGCACCTTTGGTTATTGAGATaGACAAAGAGTTACCCAGTA +
Preference number: 2 (lower is better)
Translates to: LWIPVNLSQPWATTPALHLWLLR*TKSYPV
Trigger: TACTGGGTAACTCTTTGTCCATCTCAATAACCAAAG...GTGCAAAGCAGGTGTGGTAGCCCAAGGCTGGGACAGATTAACAGGAATCCATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR-3UTR CCA 90 bp CTATGGATTCCTGTTAATCTGTCCCAGCCTTGGGCTACCACACCTGCTTTGCACCTATTGACTGATATTTaGGTTGATTCCATCTCTGAG +
Preference number: 2 (lower is better)
Translates to: LWIPVNLSQPWATTPALHLLTDI*VDSISE
Trigger: CTCAGAGATGGAATCAACCCAAATATCAGTCAATAG...GTGCAAAGCAGGTGTGGTAGCCCAAGGCTGGGACAGATTAACAGGAATCCATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR-3UTR CCA 90 bp AAAATTAACACTGAGTTACAAACTGAAGTGGCATTGTTGAAATCCACGGCTCTACAGGATAGAGTGCAGTaGCGCGATCTCGGCTCACTG +
Preference number: 2 (lower is better)
Translates to: KINTELQTEVALLKSTALQDRVQ*RDLGSL
Trigger: CAGTGAGCCGAGATCGCGCCACTGCACTCTATCCTG...TAGAGCCGTGGATTTCAACAATGCCACTTCAGTTTGTAACTCAGTGTTAATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR-3UTR CCA 90 bp CTATGGATTCCTGTTAATCTGTCCCAGCCTTGGGCTACCACACCTGCTTTGCACGTCTGTAAAATTGGATaGACTGCCAATCAGAAAATG +
Preference number: 2 (lower is better)
Translates to: LWIPVNLSQPWATTPALHVCKIG*TANQKM
Trigger: CATTTTCTGATTGGCAGTCCATCCAATTTTACAGAC...GTGCAAAGCAGGTGTGGTAGCCCAAGGCTGGGACAGATTAACAGGAATCCATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR-3UTR GCA 90 bp TCCGAATACCCAGGGAGATTAGGTGGTTCATCACCTGAGAGCTTTGTTTTTACTCTGTACACCTGGCTCTaGCTTTTAGATAACAGTAGC +
Preference number: 2 (lower is better)
Translates to: SEYPGRLGGSSPESFVFTLYTWL*LLDNSS
Trigger: GCTACTGTTATCTAAAAGGCAGAGCCAGGTGTACAG...AGTAAAAACAAAGCTCTCAGGTGATGAACCACCTAATCTCCCTGGGTATTCGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR-3UTR TCA 90 bp AAAATTAACACTGAGTTACAAACTGAAGTGGCATTGTTGAAATCCACGGCTCTAGGCGGGAGGATCACTTaGGTCCAGGAGTTTGAAAAC +
Preference number: 2 (lower is better)
Translates to: KINTELQTEVALLKSTALGGRIT*VQEFEN
Trigger: GTTTTCAAACTCCTGGACTCAAGTGATCCTCCCGCC...TAGAGCCGTGGATTTCAACAATGCCACTTCAGTTTGTAACTCAGTGTTAATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR-3UTR GCA 90 bp CTCTGTTTTATCCTTCACAGAATAAGCCAAATGAGAGTTGGAAGTGACTGCAGATTCAACCAATTTTCCTaGCTCAGCCTCCCAAGTAGC +
Preference number: 2 (lower is better)
Translates to: LCFILHRISQMRVGSDCRFNQFS*LSLPSS
Trigger: GCTACTTGGGAGGCTGAGGCAGGAAAATTGGTTGAA...TCTGCAGTCACTTCCAACTCTCATTTGGCTTATTCTGTGAAGGATAAAACAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR-3UTR CCA 90 bp CAGCTCTGTTTTATCCTTCACAGAATAAGCCAAATGAGAGTTGGAAGTGACTGCATCTCTCCCCTCTCTTaGGCATCATGTTTAGGTTCT +
Preference number: 2 (lower is better)
Translates to: QLCFILHRISQMRVGSDCISPLS*ASCLGS
Trigger: AGAACCTAAACATGATGCCCAAGAGAGGGGAGAGAT...GCAGTCACTTCCAACTCTCATTTGGCTTATTCTGTGAAGGATAAAACAGAGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR-3UTR TCA 90 bp TCCGAATACCCAGGGAGATTAGGTGGTTCATCACCTGAGAGCTTTGTTTTTACTAGTACTAAAAGTCTCTaGTACGCAGAAATAATGGCG +
Preference number: 2 (lower is better)
Translates to: SEYPGRLGGSSPESFVFTSTKSL*YAEIMA
Trigger: CGCCATTATTTCTGCGTATCAGAGACTTTTAGTACT...AGTAAAAACAAAGCTCTCAGGTGATGAACCACCTAATCTCCCTGGGTATTCGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR-3UTR CCA 90 bp TCCGAATACCCAGGGAGATTAGGTGGTTCATCACCTGAGAGCTTTGTTTTTACTTCCTTTCTTATCTGTTaGTTAAAAGAGCCGATCCTC +
Preference number: 2 (lower is better)
Translates to: SEYPGRLGGSSPESFVFTSFLIC*LKEPIL
Trigger: GAGGATCGGCTCTTTTAACCAACAGATAAGAAAGGA...AGTAAAAACAAAGCTCTCAGGTGATGAACCACCTAATCTCCCTGGGTATTCGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR CAA 90 bp AATCATAGCACATTGCAAACACATAATGTCTCTACTTTGATAATTTaGGGTCGCATCCCTGGGCTATGGATTCCTGTTAATCTGTCCCAG +
Preference number: 2 (lower is better)
Translates to: NHSTLQTHNVSTLII*GRIPGLWIPVNLSQ
Trigger: CTGGGACAGATTAACAGGAATCCATAGCCCAGGGATGCGACCCAAAATTATCAAAGTAGAGACATTATGTGTTTGCAATGTGCTATGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR-3UTR CCA 90 bp CTCTGTTTTATCCTTCACAGAATAAGCCAAATGAGAGTTGGAAGTGACTGCAGAGAGACTCAAGAGGTCTaGTTACTGAAGATACAGATC +
Preference number: 2 (lower is better)
Translates to: LCFILHRISQMRVGSDCRETQEV*LLKIQI
Trigger: GATCTGTATCTTCAGTAACCAGACCTCTTGAGTCTC...TCTGCAGTCACTTCCAACTCTCATTTGGCTTATTCTGTGAAGGATAAAACAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR-3UTR CCA 90 bp AAAATTAACACTGAGTTACAAACTGAAGTGGCATTGTTGAAATCCACGGCTCTAGAGAGCTGCCCAGCCTaGCCTTACATTCTTTCAATT +
Preference number: 2 (lower is better)
Translates to: KINTELQTEVALLKSTALESCPA*PYILSI
Trigger: AATTGAAAGAATGTAAGGCCAGGCTGGGCAGCTCTC...TAGAGCCGTGGATTTCAACAATGCCACTTCAGTTTGTAACTCAGTGTTAATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR-3UTR GCA 90 bp CTCTGTTTTATCCTTCACAGAATAAGCCAAATGAGAGTTGGAAGTGACTGCAGAGCAGGGTGTAGCAGTTaGCTTAATGGTGATATAATT +
Preference number: 2 (lower is better)
Translates to: LCFILHRISQMRVGSDCRAGCSS*LNGDII
Trigger: AATTATATCACCATTAAGGCAACTGCTACACCCTGC...TCTGCAGTCACTTCCAACTCTCATTTGGCTTATTCTGTGAAGGATAAAACAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR-3UTR CCA 90 bp TACACCTGGCTCTGCCTTTTAGATAACAGTAGCAAAATTAGTGAAAGTACTAAAAGGAAGATAGTGTTCTaGGTGGGAGACTCAAGAGGT +
Preference number: 2 (lower is better)
Translates to: YTWLCLLDNSSKISESTKRKIVF*VGDSRG
Trigger: ACCTCTTGAGTCTCCCACCCAGAACACTATCTTCCT...TTTAGTACTTTCACTAATTTTGCTACTGTTATCTAAAAGGCAGAGCCAGGTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR CAA 90 bp TCCTTGGTCACATTAATAACTTCCGTTGTGATGTCCTCTGTAGCTTaGCATAGTTCTATTCAAACAACTCAGTACATGGAAAACTGGATG +
Preference number: 2 (lower is better)
Translates to: SLVTLITSVVMSSVA*HSSIQTTQYMENWM
Trigger: CATCCAGTTTTCCATGTACTGAGTTGTTTGAATAGAACTATGCAAAGCTACAGAGGACATCACAACGGAAGTTATTAATGTGACCAAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR CAA 90 bp CACTGCATTAATCATAGCACATTGCAAACACATAATGTCTCTACTTaGATAATTTTGGGTCGCATCCCTGGGCTATGGATTCCTGTTAAT +
Preference number: 2 (lower is better)
Translates to: HCINHSTLQTHNVST*IILGRIPGLWIPVN
Trigger: ATTAACAGGAATCCATAGCCCAGGGATGCGACCCAAAATTATCAAAGTAGAGACATTATGTGTTTGCAATGTGCTATGATTAATGCAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR-3UTR TCA 90 bp AAAATTAACACTGAGTTACAAACTGAAGTGGCATTGTTGAAATCCACGGCTCTAATTCTTTCCAGTATGTaGTCCTGGTCTTTGATTCCC +
Preference number: 2 (lower is better)
Translates to: KINTELQTEVALLKSTALILSSM*SWSLIP
Trigger: GGGAATCAAAGACCAGGATCACATACTGGAAAGAAT...TAGAGCCGTGGATTTCAACAATGCCACTTCAGTTTGTAACTCAGTGTTAATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR-3UTR GCA 90 bp AAAATTAACACTGAGTTACAAACTGAAGTGGCATTGTTGAAATCCACGGCTCTACATATCATTACTGCCTaGCAGCATTTCCTTAGGCTA +
Preference number: 2 (lower is better)
Translates to: KINTELQTEVALLKSTALHIITA*QHFLRL
Trigger: TAGCCTAAGGAAATGCTGGCAGGCAGTAATGATATG...TAGAGCCGTGGATTTCAACAATGCCACTTCAGTTTGTAACTCAGTGTTAATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR-3UTR CCA 90 bp CTCTGTTTTATCCTTCACAGAATAAGCCAAATGAGAGTTGGAAGTGACTGCAGACATGTCACTTTCATTTaGCCTGATCAAGTTTTTACT +
Preference number: 2 (lower is better)
Translates to: LCFILHRISQMRVGSDCRHVTFI*PDQVFT
Trigger: AGTAAAAACTTGATCAGGCCAAATGAAAGTGACATG...TCTGCAGTCACTTCCAACTCTCATTTGGCTTATTCTGTGAAGGATAAAACAGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR CAA 90 bp ACCTGTAAATCTTGCCAGTTATGTCACTGCATTAATCATAGCACATaGCAAACACATAATGTCTCTACTTTGATAATTTTGGGTCGCATC +
Preference number: 2 (lower is better)
Translates to: TCKSCQLCHCINHST*QTHNVSTLIILGRI
Trigger: GATGCGACCCAAAATTATCAAAGTAGAGACATTATGTGTTTGCAATGTGCTATGATTAATGCAGTGACATAACTGGCAAGATTTACAGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR-3UTR GCA 90 bp AAAATTAACACTGAGTTACAAACTGAAGTGGCATTGTTGAAATCCACGGCTCTAAACAAGTACAAAGCTTaGAATTGCAACAGCAATTGC +
Preference number: 2 (lower is better)
Translates to: KINTELQTEVALLKSTALNKYKA*NCNSNC
Trigger: GCAATTGCTGTTGCAATTGCAAGCTTTGTACTTGTT...TAGAGCCGTGGATTTCAACAATGCCACTTCAGTTTGTAACTCAGTGTTAATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR CCA 72 bp GTCTCCGCACATGGGGAGAAAAACCCACCGACCCTGTaGGGCTGGTCCCTACAGTTGGCCGGGCACGGTGGC +
Preference number: 3 (lower is better)
Translates to: VSAHGEKNPPTL*GWSLQLAGHGG
Trigger: GCCACCGTGCCCGGCCAACTGTAGGGACCAGCCCCACAGGGTCGGTGGGTTTTTCTCCCCATGTGCGGAGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR CCA 72 bp GTGGAGCCTGTGAATGCCACTTTGTCCACATCCTCATaGGAGGCAATGGCGGCCCCAGCCGTGGGGCCAAAT +
Preference number: 3 (lower is better)
Translates to: VEPVNATLSTSS*EAMAAPAVGPN
Trigger: ATTTGGCCCCACGGCTGGGGCCGCCATTGCCTCCCATGAGGATGTGGACAAAGTGGCATTCACAGGCTCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548536.1
3UTR TCA 72 bp ACATTGTTGGCTGTGGGCGGCAAGCCATCCAGGTGCTaGGGCAAGAGACCGAGGGCACGAGCTGTTCCAGTA +
Preference number: 3 (lower is better)
Translates to: TLLAVGGKPSRC*GKRPRARAVPV
Trigger: TACTGGAACAGCTCGTGCCCTCGGTCTCTTGCCTCAGCACCTGGATGGCTTGCCGCCCACAGCCAACAATGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR-3UTR CAA 90 bp CAACATCGTTGGAAGGACACCGGTGGGAGGGGCTGTCCTGTTAATTCTTGGAGAACCGGTCTCCGCCTCTaGGTGGTAGTGGTCCCCCAA +
Preference number: 3 (lower is better)
Translates to: QHRWKDTGGRGCPVNSWRTGLRL*VVVVPQ
Trigger: TTGGGGGACCACTACCACCAAGAGGCGGAGACCGGT...TCTCCAAGAATTAACAGGACAGCCCCTCCCACCGGTGTCCTTCCAACGATGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR CCA 72 bp TCTTGCTATCAAAGGGGTTCCCGACCACCCGAGACTTaGCCCGGGCAACGCTCCGCTCCACAAACTCATCAT +
Preference number: 3 (lower is better)
Translates to: SCYQRGSRPPET*PGQRSAPQTHH
Trigger: ATGATGAGTTTGTGGAGCGGAGCGTTGCCCGGGCCAAGTCTCGGGTGGTCGGGAACCCCTTTGATAGCAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548536.1
3UTR TCA 72 bp CAAACTCACTTCTGCTTCAGCCGCCAGAAGGTTCGCTaGGGGCAATCACTCCCTGGCGCCATGCTCTTTGAG +
Preference number: 3 (lower is better)
Translates to: QTHFCFSRQKVR*GQSLPGAMLFE
Trigger: CTCAAAGAGCATGGCGCCAGGGAGTGATTGCCCTCAGCGAACCTTCTGGCGGCTGAAGCAGAAGTGAGTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR GCA 72 bp CTGTGGTGCTGTGCTTCAGTGGTCACGCTCCTAGTCTaGCTTCATGTTCCATCCTGTACACCTGGCTCTGCC +
Preference number: 3 (lower is better)
Translates to: LWCCASVVTLLV*LHVPSCTPGSA
Trigger: GGCAGAGCCAGGTGTACAGGATGGAACATGAAGGCAGACTAGGAGCGTGACCACTGAAGCACAGCACCACAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR GCA 72 bp TTTCCAGTTGCCAAGGCTGGGCCCAGCTTCCATGCTTaGATCAGGAGCGGGAAATTCCACGGAATGATCTGC +
Preference number: 3 (lower is better)
Translates to: FPVAKAGPSFHA*IRSGKFHGMIC
Trigger: GCAGATCATTCCGTGGAATTTCCCGCTCCTGATGCAAGCATGGAAGCTGGGCCCAGCCTTGGCAACTGGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548536.1
3UTR GCA 72 bp CACGTTTCCAGTTGCCAAGGCTGGGCCCAGCTTCCATaGTTGCATCAGGAGCGGGAAATTCCACGGAATGAT +
Preference number: 3 (lower is better)
Translates to: HVSSCQGWAQLP*LHQEREIPRND
Trigger: ATCATTCCGTGGAATTTCCCGCTCCTGATGCAAGCATGGAAGCTGGGCCCAGCCTTGGCAACTGGAAACGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548536.1
3UTR GCA 72 bp CTGCTCAGCTACCTTCATCACAACCACGTTTCCAGTTaGCAAGGCTGGGCCCAGCTTCCATGCTTGCATCAG +
Preference number: 3 (lower is better)
Translates to: LLSYLHHNHVSS*QGWAQLPCLHQ
Trigger: CTGATGCAAGCATGGAAGCTGGGCCCAGCCTTGGCAACTGGAAACGTGGTTGTGATGAAGGTAGCTGAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548536.1
3UTR GCA 72 bp CTGGATTACGCGGCCAATCTCAGTGGAGCCTGTGAATaGCACTTTGTCCACATCCTCATGGGAGGCAATGGC +
Preference number: 3 (lower is better)
Translates to: LDYAANLSGACE*HFVHILMGGNG
Trigger: GCCATTGCCTCCCATGAGGATGTGGACAAAGTGGCATTCACAGGCTCCACTGAGATTGGCCGCGTAATCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548536.1
3UTR CCA 72 bp AGGAAAAGCTCTCTGTGCCCTCTGTGCAGCCACAAGTaGAGGCTCTACCCAGAAGCAGCGGCTTTACACCTA +
Preference number: 3 (lower is better)
Translates to: RKSSLCPLCSHK*RLYPEAAALHL
Trigger: TAGGTGTAAAGCCGCTGCTTCTGGGTAGAGCCTCCACTTGTGGCTGCACAGAGGGCACAGAGAGCTTTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR CCA 72 bp TACCTTCATCACAACCACGTTTCCAGTTGCCAAGGCTaGGCCCAGCTTCCATGCTTGCATCAGGAGCGGGAA +
Preference number: 3 (lower is better)
Translates to: YLHHNHVSSCQG*AQLPCLHQERE
Trigger: TTCCCGCTCCTGATGCAAGCATGGAAGCTGGGCCCAGCCTTGGCAACTGGAAACGTGGTTGTGATGAAGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548536.1
3UTR-3UTR CAA 90 bp CTATGGATTCCTGTTAATCTGTCCCAGCCTTGGGCTACCACACCTGCTTTGCACAAGCAGGAGGATCATTaGAGCCCAGGAGGTCGAGGC +
Preference number: 3 (lower is better)
Translates to: LWIPVNLSQPWATTPALHKQEDH*SPGGRG
Trigger: GCCTCGACCTCCTGGGCTCAAATGATCCTCCTGCTT...GTGCAAAGCAGGTGTGGTAGCCCAAGGCTGGGACAGATTAACAGGAATCCATAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR-3UTR CAA 90 bp CCTGGGCTATGGATTCCTGTTAATCTGTCCCAGCCTTGGGCTACCACACCTGCTTTACTGAGAACTGAATaGGGCACAGTGGCTCACACC +
Preference number: 3 (lower is better)
Translates to: PGLWIPVNLSQPWATTPALLRTE*GTVAHT
Trigger: GGTGTGAGCCACTGTGCCCAATTCAGTTCTCAGTAA...AGCAGGTGTGGTAGCCCAAGGCTGGGACAGATTAACAGGAATCCATAGCCCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR-3UTR CAA 90 bp GTGGTGTTTCACATGATGGTAGAGACTGCTGATTGCCCTCTTGAACCCAGCTTCCACTGTGCCCGGCCTTaGCCAGGTATCTTGACTAGA +
Preference number: 3 (lower is better)
Translates to: VVFHMMVETADCPLEPSFHCARP*PGILTR
Trigger: TCTAGTCAAGATACCTGGCAAAGGCCGGGCACAGTG...GAAGCTGGGTTCAAGAGGGCAATCAGCAGTCTCTACCATCATGTGAAACACCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR-3UTR CAA 90 bp CTCTGTTTTATCCTTCACAGAATAAGCCAAATGAGAGTTGGAAGTGACTGCAGAGGCTGGTCCCTACAGTaGGCCGGGCACGGTGGCTCA +
Preference number: 3 (lower is better)
Translates to: LCFILHRISQMRVGSDCRGWSLQ*AGHGGS
Trigger: TGAGCCACCGTGCCCGGCCAACTGTAGGGACCAGCC...TCTGCAGTCACTTCCAACTCTCATTTGGCTTATTCTGTGAAGGATAAAACAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR-3UTR CAA 90 bp CCTGGGCTATGGATTCCTGTTAATCTGTCCCAGCCTTGGGCTACCACACCTGCTCATATTGAAAACACATaGTTGGCTGTGGGCGGCAAG +
Preference number: 3 (lower is better)
Translates to: PGLWIPVNLSQPWATTPAHIENT*LAVGGK
Trigger: CTTGCCGCCCACAGCCAACAATGTGTTTTCAATATG...AGCAGGTGTGGTAGCCCAAGGCTGGGACAGATTAACAGGAATCCATAGCCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR-3UTR CAA 90 bp CTATGGATTCCTGTTAATCTGTCCCAGCCTTGGGCTACCACACCTGCTTTGCACTTGTATGCAACATCGTaGGAAGGACACCGGTGGGAG +
Preference number: 3 (lower is better)
Translates to: LWIPVNLSQPWATTPALHLYATS*EGHRWE
Trigger: CTCCCACCGGTGTCCTTCCAACGATGTTGCATACAA...GTGCAAAGCAGGTGTGGTAGCCCAAGGCTGGGACAGATTAACAGGAATCCATAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR TCA 72 bp TACCCAGAAGCAGCGGCTTTACACCTAATACTCCTGTaGCTGACCCACATCCGAATACCCAGGGAGATTAGG +
Preference number: 3 (lower is better)
Translates to: YPEAAALHLILL*LTHIRIPREIR
Trigger: CCTAATCTCCCTGGGTATTCGGATGTGGGTCAGTCACAGGAGTATTAGGTGTAAAGCCGCTGCTTCTGGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR GCA 72 bp CATTACACTGCCTGCCAAATGTACAGCCAAATTGTATaGAACATCGTTGGAAGGACACCGGTGGGAGGGGCT +
Preference number: 3 (lower is better)
Translates to: HYTACQMYSQIV*NIVGRTPVGGA
Trigger: AGCCCCTCCCACCGGTGTCCTTCCAACGATGTTGCATACAATTTGGCTGTACATTTGGCAGGCAGTGTAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR-3UTR CAA 90 bp TTCCATCAATGGCTGAGGGAGGAAGCTTGCATGATTCTTATGAGTTCTTCTGAGCAGCTTCGCCCCCTCTaGCTTCCCCGTGTTGATGTA +
Preference number: 3 (lower is better)
Translates to: FHQWLREEACMILMSSSEQLRPL*LPRVDV
Trigger: TACATCAACACGGGGAAGCAAGAGGGGGCGAAGCTG...CTCAGAAGAACTCATAAGAATCATGCAAGCTTCCTCCCTCAGCCATTGATGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548536.1
3UTR CCA 72 bp AAGGACACCGGTGGGAGGGGCTGTCCTGTTAATTCTTaGAGAAATAGCGTCGTAGTTCAATGTATGTCCCAC +
Preference number: 3 (lower is better)
Translates to: KDTGGRGCPVNS*RNSVVVQCMSH
Trigger: GTGGGACATACATTGAACTACGACGCTATTTCTCCAAGAATTAACAGGACAGCCCCTCCCACCGGTGTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR CCA 72 bp CTGCCAAATGTACAGCCAAATTGTATGCAACATCGTTaGAAGGACACCGGTGGGAGGGGCTGTCCTGTTAAT +
Preference number: 3 (lower is better)
Translates to: LPNVQPNCMQHR*KDTGGRGCPVN
Trigger: ATTAACAGGACAGCCCCTCCCACCGGTGTCCTTCCAACGATGTTGCATACAATTTGGCTGTACATTTGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR CCA 72 bp CCTGGGCTATGGATTCCTGTTAATCTGTCCCAGCCTTaGGCTACCACACCTGCTTTGCACTTCATGAAACAT +
Preference number: 3 (lower is better)
Translates to: PGLWIPVNLSQP*ATTPALHFMKH
Trigger: ATGTTTCATGAAGTGCAAAGCAGGTGTGGTAGCCCAAGGCTGGGACAGATTAACAGGAATCCATAGCCCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR-3UTR CAA 90 bp GTGGTGCTGTGCTTCAGTGGTCACGCTCCTAGTCTGCCTTCATGTTCCATCCTGGTTTTGTTGCTGATCTaGCTGAACTTTCCATCAATG +
Preference number: 3 (lower is better)
Translates to: VVLCFSGHAPSLPSCSILVLLLI*LNFPSM
Trigger: CATTGATGGAAAGTTCAGCAAGATCAGCAACAAAAC...CAGGATGGAACATGAAGGCAGACTAGGAGCGTGACCACTGAAGCACAGCACCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR-3UTR CAA 90 bp GTGGTGCTGTGCTTCAGTGGTCACGCTCCTAGTCTGCCTTCATGTTCCATCCTGCCTGCCCCTTTTGCTTaGTATCCAATAAATAACAGT +
Preference number: 3 (lower is better)
Translates to: VVLCFSGHAPSLPSCSILPAPFA*YPINNS
Trigger: ACTGTTATTTATTGGATACAAAGCAAAAGGGGCAGG...CAGGATGGAACATGAAGGCAGACTAGGAGCGTGACCACTGAAGCACAGCACCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR-3UTR CAA 90 bp CCTGGGCTATGGATTCCTGTTAATCTGTCCCAGCCTTGGGCTACCACACCTGCTTTAAACAACCAGCTCTaGAGTGAACTCATTACCATG +
Preference number: 3 (lower is better)
Translates to: PGLWIPVNLSQPWATTPALNNQL*SELITM
Trigger: CATGGTAATGAGTTCACTCAAGAGCTGGTTGTTTAA...AGCAGGTGTGGTAGCCCAAGGCTGGGACAGATTAACAGGAATCCATAGCCCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR TCA 72 bp AGGTCCACGTCACCTTTTAAACAACCAGCTCTTGAGTaGACTCATTACCATGGGGGAGGACACCAAGCCATT +
Preference number: 3 (lower is better)
Translates to: RSTSPFKQPALE*THYHGGGHQAI
Trigger: AATGGCTTGGTGTCCTCCCCCATGGTAATGAGTTCACTCAAGAGCTGGTTGTTTAAAAGGTGACGTGGACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR CCA 72 bp TCTACTTTGATAATTTTGGGTCGCATCCCTGGGCTATaGATTCCTGTTAATCTGTCCCAGCCTTGGGCTACC +
Preference number: 3 (lower is better)
Translates to: STLIILGRIPGL*IPVNLSQPWAT
Trigger: GGTAGCCCAAGGCTGGGACAGATTAACAGGAATCCATAGCCCAGGGATGCGACCCAAAATTATCAAAGTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR-3UTR CAA 90 bp CAACATCGTTGGAAGGACACCGGTGGGAGGGGCTGTCCTGTTAATTCTTGGAGACCCTACCAAGGTTCTTaGCAGTATTCTTTTCTTGTT +
Preference number: 3 (lower is better)
Translates to: QHRWKDTGGRGCPVNSWRPYQGS*QYSFLV
Trigger: AACAAGAAAAGAATACTGCAAAGAACCTTGGTAGGG...TCTCCAAGAATTAACAGGACAGCCCCTCCCACCGGTGTCCTTCCAACGATGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR GCA 72 bp CCATGGGACCTTGTGAAAGCCCATTTGCAGGGAGCTTaGACATCCAACATCACCTTTGATATCGGTGAATTA +
Preference number: 3 (lower is better)
Translates to: PWDLVKAHLQGA*TSNITFDIGEL
Trigger: TAATTCACCGATATCAAAGGTGATGTTGGATGTGCAAGCTCCCTGCAAATGGGCTTTCACAAGGTCCCATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR TCA 72 bp ATCCGAATACCCAGGGAGATTAGGTGGTTCATCACCTaGGAGCTTTGTTTTTACTTCAGACAGCTGCTTAAG +
Preference number: 3 (lower is better)
Translates to: IRIPREIRWFIT*ELCFYFRQLLK
Trigger: CTTAAGCAGCTGTCTGAAGTAAAAACAAAGCTCTCAGGTGATGAACCACCTAATCTCCCTGGGTATTCGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR CCA 72 bp TGTCTCTGTCTTCTGTTCATAGTCTGTAAAATTGGATaGACTGCCAATCAGAAAATGAGAGCTGCCCAGCCT +
Preference number: 3 (lower is better)
Translates to: CLCLLFIVCKIG*TANQKMRAAQP
Trigger: AGGCTGGGCAGCTCTCATTTTCTGATTGGCAGTCCATCCAATTTTACAGACTATGAACAGAAGACAGAGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR TCA 72 bp GAATGCCCATGGGTTGTGACCAACTCAGCATTCCACTaGGGCTATATGATCAAACAGCAAACTGTTTATCAT +
Preference number: 3 (lower is better)
Translates to: ECPWVVTNSAFH*GYMIKQQTVYH
Trigger: ATGATAAACAGTTTGCTGTTTGATCATATAGCCTCAGTGGAATGCTGAGTTGGTCACAACCCATGGGCATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR TCA 72 bp TTAATTCATAAACAGAAAGGGGGAAATGTAGAGAGCTaGATGCCCATGGGTTGTGACCAACTCAGCATTCCA +
Preference number: 3 (lower is better)
Translates to: LIHKQKGGNVES*MPMGCDQLSIP
Trigger: TGGAATGCTGAGTTGGTCACAACCCATGGGCATTCAGCTCTCTACATTTCCCCCTTTCTGTTTATGAATTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR CCA 72 bp CATAGTTCTATTCAAACAACTCAGTACATGGAAAACTaGATGCGTATAGCCAACCAAGCATGGCCACTTCAG +
Preference number: 3 (lower is better)
Translates to: HSSIQTTQYMEN*MRIANQAWPLQ
Trigger: CTGAAGTGGCCATGCTTGGTTGGCTATACGCATCCAGTTTTCCATGTACTGAGTTGTTTGAATAGAACTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR-3UTR CAA 90 bp CTCTGTTTTATCCTTCACAGAATAAGCCAAATGAGAGTTGGAAGTGACTGCAGACATGCCCACCTTCCTTaGGTTATTGAGATGGACAAA +
Preference number: 3 (lower is better)
Translates to: LCFILHRISQMRVGSDCRHAHLP*VIEMDK
Trigger: TTTGTCCATCTCAATAACCAAAGGAAGGTGGGCATG...TCTGCAGTCACTTCCAACTCTCATTTGGCTTATTCTGTGAAGGATAAAACAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR-3UTR CAA 90 bp CAGCTCTGTTTTATCCTTCACAGAATAAGCCAAATGAGAGTTGGAAGTGACTGCCATCACCTGAGAGCTTaGTTTTTACTTCAGACAGCT +
Preference number: 3 (lower is better)
Translates to: QLCFILHRISQMRVGSDCHHLRA*FLLQTA
Trigger: AGCTGTCTGAAGTAAAAACAAAGCTCTCAGGTGATG...GCAGTCACTTCCAACTCTCATTTGGCTTATTCTGTGAAGGATAAAACAGAGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR-3UTR CAA 90 bp AAAATTAACACTGAGTTACAAACTGAAGTGGCATTGTTGAAATCCACGGCTCTATGGGTTTTCATCATGTaGGCCAGGCTGATCTCGAAC +
Preference number: 3 (lower is better)
Translates to: KINTELQTEVALLKSTALWVFIM*ARLISN
Trigger: GTTCGAGATCAGCCTGGCCAACATGATGAAAACCCA...TAGAGCCGTGGATTTCAACAATGCCACTTCAGTTTGTAACTCAGTGTTAATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR-3UTR CAA 90 bp AAAATTAACACTGAGTTACAAACTGAAGTGGCATTGTTGAAATCCACGGCTCTAATGGAAGCTCAGAAGTaGTGTGGTTTGTCCAAGTTC +
Preference number: 3 (lower is better)
Translates to: KINTELQTEVALLKSTALMEAQK*CGLSKF
Trigger: GAACTTGGACAAACCACACAACTTCTGAGCTTCCAT...TAGAGCCGTGGATTTCAACAATGCCACTTCAGTTTGTAACTCAGTGTTAATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR-3UTR CAA 90 bp CTCTGTTTTATCCTTCACAGAATAAGCCAAATGAGAGTTGGAAGTGACTGCAGATCTCTCTATATAGATTaGCCTGTTCTGGATATTTCC +
Preference number: 3 (lower is better)
Translates to: LCFILHRISQMRVGSDCRSLYID*PVLDIS
Trigger: GGAAATATCCAGAACAGGCAAATCTATATAGAGAGA...TCTGCAGTCACTTCCAACTCTCATTTGGCTTATTCTGTGAAGGATAAAACAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR CCA 72 bp TACATGGAAAACTGGATGCGTATAGCCAACCAAGCATaGCCACTTCAGAATAAAATTAACACTGAGTTACAA +
Preference number: 3 (lower is better)
Translates to: YMENWMRIANQA*PLQNKINTELQ
Trigger: TTGTAACTCAGTGTTAATTTTATTCTGAAGTGGCCATGCTTGGTTGGCTATACGCATCCAGTTTTCCATGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR TCA 72 bp ATGGATATGTCACATTTTGTCTGTCCATTCATCTATTaGCTGATATTTGGGTTGATTCCATCTCTGAGCTGT +
Preference number: 3 (lower is better)
Translates to: MDMSHFVCPFIY*LIFGLIPSLSC
Trigger: ACAGCTCAGAGATGGAATCAACCCAAATATCAGTCAATAGATGAATGGACAGACAAAATGTGACATATCCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR GCA 72 bp CAGAAATCATATCCAGTGTGCCATATCATTACTGCCTaGCAGCATTTCCTTAGGCTATTTCATTTATTTACT +
Preference number: 3 (lower is better)
Translates to: QKSYPVCHIITA*QHFLRLFHLFT
Trigger: AGTAAATAAATGAAATAGCCTAAGGAAATGCTGGCAGGCAGTAATGATATGGCACACTGGATATGATTTCTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR GCA 72 bp CTCCAGGTAAACAATATCCAATTGACCTGTAAATCTTaGCAGTTATGTCACTGCATTAATCATAGCACATTG +
Preference number: 3 (lower is better)
Translates to: LQVNNIQLTCKS*QLCHCINHSTL
Trigger: CAATGTGCTATGATTAATGCAGTGACATAACTGGCAAGATTTACAGGTCAATTGGATATTGTTTACCTGGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR TCA 72 bp AGTAAATTGACATCTGGTTTCCAAATCAATCTATTATaGAATTGGCCCATGTCACTTTCATTTGGCCTGATC +
Preference number: 3 (lower is better)
Translates to: SKLTSGFQINLL*NWPMSLSFGLI
Trigger: GATCAGGCCAAATGAAAGTGACATGGGCCAATTTCATAATAGATTGATTTGGAAACCAGATGTCAATTTACT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR GCA 72 bp ATCCAATTGACCTGTAAATCTTGCCAGTTATGTCACTaGATTAATCATAGCACATTGCAAACACATAATGTC +
Preference number: 3 (lower is better)
Translates to: IQLTCKSCQLCH*INHSTLQTHNV
Trigger: GACATTATGTGTTTGCAATGTGCTATGATTAATGCAGTGACATAACTGGCAAGATTTACAGGTCAATTGGAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR GCA 90 bp CGGCCCCTGTGTGATGCGTCCATGCGGCGCCAAGGTGAGCCCAGCTGGAAGGCGCAGAAGACCTCGGGCTaGTGGTTGGGGGCAGGCACG +
Preference number: 4 (lower is better)
Translates to: RPLCDASMRRQGEPSWKAQKTSG*WLGAGT
Trigger: CGTGCCTGCCCCCAACCAGCAGCCCGAGGTCTTCTG...CGCCTTCCAGCTGGGCTCACCTTGGCGCCGCATGGACGCATCACACAGGGGCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548536.1
CDS-3UTR CCA 90 bp GCCCGTACTCGCCCAACTCCCGGCCACTCCCCGACATCTTGTAGCCACCAAAGGCCTCATGGGAGGCAATaGCGGCCCCAGCCGTGGGGC +
Preference number: 4 (lower is better)
Translates to: ARTRPTPGHSPTSCSHQRPHGRQ*RPQPWG
Trigger: GCCCCACGGCTGGGGCCGCCATTGCCTCCCATGAGG...CCTTTGGTGGCTACAAGATGTCGGGGAGTGGCCGGGAGTTGGGCGAGTACGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000548536.1
CDS-3UTR TCA 90 bp GACAGTTTTCACTTCAGTGTATGCCTGCAGCCCGTACTCGCCCAACTCCCGGCCCTGGGTGGCGGCGGCTaGCAAGAGGCGGCGGCCCAG +
Preference number: 4 (lower is better)
Translates to: DSFHFSVCLQPVLAQLPALGGGG*QEAAAQ
Trigger: CTGGGCCGCCGCCTCTTGTCAGCCGCCGCCACCCAG...GGCCGGGAGTTGGGCGAGTACGGGCTGCAGGCATACACTGAAGTGAAAACTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548536.1
CDS-3UTR TCA 90 bp TGTGATGCGTCCATGCGGCGCCAAGGTGAGCCCAGCTGGAAGGCGGCCCGGGCGGTAGCCACCAAAGGGTaGCTGGGCTCCAAACACATC +
Preference number: 4 (lower is better)
Translates to: CDASMRRQGEPSWKAARAVATKG*LGSKHI
Trigger: GATGTGTTTGGAGCCCAGTCACCCTTTGGTGGCTAC...CGCCCGGGCCGCCTTCCAGCTGGGCTCACCTTGGCGCCGCATGGACGCATCACA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548536.1
CDS-3UTR CCA 90 bp CCGAGACTTGGCCCGGGCAACGCTCCGCTCCACAAACTCATCATAGATGTCCTCGGGGCAGGCACGGCCTaGGTGGCGGCGGCTGACAAG +
Preference number: 4 (lower is better)
Translates to: PRLGPGNAPLHKLIIDVLGAGTA*VAAADK
Trigger: CTTGTCAGCCGCCGCCACCCAGGCCGTGCCTGCCCC...GAGGACATCTATGATGAGTTTGTGGAGCGGAGCGTTGCCCGGGCCAAGTCTCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548536.1
CDS-3UTR CCA 90 bp GCAGTTGACCCACACAGTGCCCGCCTGGAGGGCCTGGGACAGGTAATTGGCCTTTTGGGCGGGGCGTGGTaGGGGGATGTCCTAGCTCCC +
Preference number: 4 (lower is better)
Translates to: AVDPHSARLEGLGQVIGLLGGAW*GDVLAP
Trigger: GGGAGCTAGGACATCCCCCCACCACGCCCCGCCCAA...AAGGCCAATTACCTGTCCCAGGCCCTCCAGGCGGGCACTGTGTGGGTCAACTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000548536.1
CDS-3UTR TCA 90 bp CGGCCCCTGTGTGATGCGTCCATGCGGCGCCAAGGTGAGCCCAGCTGGAAGGCGTCCCCTTCAGCTACCTaGCAGATGACCTCTCCAGTG +
Preference number: 4 (lower is better)
Translates to: RPLCDASMRRQGEPSWKASPSAT*QMTSPV
Trigger: CACTGGAGAGGTCATCTGTCAGGTAGCTGAAGGGGA...CGCCTTCCAGCTGGGCTCACCTTGGCGCCGCATGGACGCATCACACAGGGGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548536.1
CDS-3UTR CCA 90 bp TGTGATGCGTCCATGCGGCGCCAAGGTGAGCCCAGCTGGAAGGCGGCCCGGGCGCAGGATCTGCATCACTaGCCCGAAGATCTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: CDASMRRQGEPSWKAARAQDLHH*PEDLLL
Trigger: AAGGAGGAGATCTTCGGGCCAGTGATGCAGATCCTG...CGCCCGGGCCGCCTTCCAGCTGGGCTCACCTTGGCGCCGCATGGACGCATCACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548536.1
CDS-3UTR TCA 90 bp CAACATCGTTGGAAGGACACCGGTGGGAGGGGCTGTCCTGTTAATTCTTGGAGACTGGGTGGCGGCGGCTaGCAAGAGGCGGCGGCCCAG +
Preference number: 4 (lower is better)
Translates to: QHRWKDTGGRGCPVNSWRLGGGG*QEAAAQ
Trigger: CTGGGCCGCCGCCTCTTGTCAGCCGCCGCCACCCAG...TCTCCAAGAATTAACAGGACAGCCCCTCCCACCGGTGTCCTTCCAACGATGTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR CCA 90 bp CCTGGGCTATGGATTCCTGTTAATCTGTCCCAGCCTTGGGCTACCACACCTGCTCAAGGTGAGCCCAGCTaGAAGGCGGCCCGGGCGGCC +
Preference number: 4 (lower is better)
Translates to: PGLWIPVNLSQPWATTPAQGEPS*KAARAA
Trigger: GGCCGCCCGGGCCGCCTTCCAGCTGGGCTCACCTTG...AGCAGGTGTGGTAGCCCAAGGCTGGGACAGATTAACAGGAATCCATAGCCCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR TCA 90 bp TGTGACAGTTTTCACTTCAGTGTATGCCTGCAGCCCGTACTCGCCCAACTCCCGCATGCGGCGCCAAGGTaGGCCCAGCTGGAAGGCGGC +
Preference number: 4 (lower is better)
Translates to: CDSFHFSVCLQPVLAQLPHAAPR*AQLEGG
Trigger: GCCGCCTTCCAGCTGGGCTCACCTTGGCGCCGCATG...CGGGAGTTGGGCGAGTACGGGCTGCAGGCATACACTGAAGTGAAAACTGTCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548536.1
CDS-3UTR TCA 90 bp AAAGGGGTTCCCGACCACCCGAGACTTGGCCCGGGCAACGCTCCGCTCCACAAAGGAAATTCCACGGAATaGTCTGCCCGCACACCCCCA +
Preference number: 4 (lower is better)
Translates to: KGVPDHPRLGPGNAPLHKGNSTE*SARTPP
Trigger: TGGGGGTGTGCGGGCAGATCATTCCGTGGAATTTCC...TTTGTGGAGCGGAGCGTTGCCCGGGCCAAGTCTCGGGTGGTCGGGAACCCCTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548536.1
CDS-3UTR TCA 90 bp TTCCCGACCACCCGAGACTTGGCCCGGGCAACGCTCCGCTCCACAAACTCATCACCACATAGAGGGCGGTaGGGGGTGTCTGCTCAGCTA +
Preference number: 4 (lower is better)
Translates to: FPTTRDLARATLRSTNSSPHRGR*GVSAQL
Trigger: TAGCTGAGCAGACACCCCTCACCGCCCTCTATGTGG...TGATGAGTTTGTGGAGCGGAGCGTTGCCCGGGCCAAGTCTCGGGTGGTCGGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548536.1
CDS-3UTR GCA 90 bp GCCCGTACTCGCCCAACTCCCGGCCACTCCCCGACATCTTGTAGCCACCAAAGGTGGGCCCAGCTTCCATaGTTGCATCAGGAGCGGGAA +
Preference number: 4 (lower is better)
Translates to: ARTRPTPGHSPTSCSHQRWAQLP*LHQERE
Trigger: TTCCCGCTCCTGATGCAAGCATGGAAGCTGGGCCCA...CCTTTGGTGGCTACAAGATGTCGGGGAGTGGCCGGGAGTTGGGCGAGTACGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548536.1
CDS-3UTR GCA 90 bp ATGCCACTTTGTCCACATCCTCATGGGAGGCAATGGCGGCCCCAGCCGTGGGGCTCCACCTGCGGCCCCTaGTCGGTCTTGCTATCAAAG +
Preference number: 4 (lower is better)
Translates to: MPLCPHPHGRQWRPQPWGSTCGP*SVLLSK
Trigger: CTTTGATAGCAAGACCGAGCAGGGGCCGCAGGTGGA...GCCCCACGGCTGGGGCCGCCATTGCCTCCCATGAGGATGTGGACAAAGTGGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000548536.1
CDS-3UTR CCA 90 bp CTCCCAACAACCTCCTCTATGGTCTTGAACTTCAGGATCTGCATCACTGGCCCGCAAGGTGAGCCCAGCTaGAAGGCGGCCCGGGCGGCC +
Preference number: 4 (lower is better)
Translates to: LPTTSSMVLNFRICITGPQGEPS*KAARAA
Trigger: GGCCGCCCGGGCCGCCTTCCAGCTGGGCTCACCTTG...CGGGCCAGTGATGCAGATCCTGAAGTTCAAGACCATAGAGGAGGTTGTTGGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548536.1
CDS-3UTR TCA 90 bp CATAGGGCTTGCCATTGTCCAGGGTCTCCAAGGCCGCCAGGTAGGTCCGGTCCCCAGCTACCTGACAGATaGCCTCTCCAGTGGACGGAT +
Preference number: 4 (lower is better)
Translates to: HRACHCPGSPRPPGRSGPQLPDR*PLQWTD
Trigger: ATCCGTCCACTGGAGAGGTCATCTGTCAGGTAGCTG...GGGACCGGACCTACCTGGCGGCCTTGGAGACCCTGGACAATGGCAAGCCCTATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548536.1
CDS-3UTR TCA 90 bp TTTCACTTCAGTGTATGCCTGCAGCCCGTACTCGCCCAACTCCCGGCCACTCCCAGCACTGGCCCTGGTTaGAGAACAGGGCGAAGTGGG +
Preference number: 4 (lower is better)
Translates to: FHFSVCLQPVLAQLPATPSTGPG*RTGRSG
Trigger: CCCACTTCGCCCTGTTCTTCAACCAGGGCCAGTGCT...GGGAGTGGCCGGGAGTTGGGCGAGTACGGGCTGCAGGCATACACTGAAGTGAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548536.1
ENST00000549106.1
CDS-3UTR TCA 90 bp TGTCCAGGGTCTCCAAGGCCGCCAGGTAGGTCCGGTCCCGCTCGATCAGATCGGCTTGCTTCCCCGTGTTaGTGTAGCCGAGGATCTTCT +
Preference number: 4 (lower is better)
Translates to: CPGSPRPPGRSGPARSDRLASPC*CSRGSS
Trigger: AGAAGATCCTCGGCTACATCAACACGGGGAAGCAAG...CCGATCTGATCGAGCGGGACCGGACCTACCTGGCGGCCTTGGAGACCCTGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548536.1
CDS-3UTR GCA 90 bp GCCCGTACTCGCCCAACTCCCGGCCACTCCCCGACATCTTGTAGCCACCAAAGGAACCACGTTTCCAGTTaGCAAGGCTGGGCCCAGCTT +
Preference number: 4 (lower is better)
Translates to: ARTRPTPGHSPTSCSHQRNHVSS*QGWAQL
Trigger: AAGCTGGGCCCAGCCTTGGCAACTGGAAACGTGGTT...CCTTTGGTGGCTACAAGATGTCGGGGAGTGGCCGGGAGTTGGGCGAGTACGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548536.1
CDS-3UTR GCA 90 bp TTCAGTGTATGCCTGCAGCCCGTACTCGCCCAACTCCCGGCCACTCCCCGACATGCCCCTGCTCGGTCTTaGTATCAAAGGGGTTCCCGA +
Preference number: 4 (lower is better)
Translates to: FSVCLQPVLAQLPATPRHAPARS*YQRGSR
Trigger: TCGGGAACCCCTTTGATAGCAAGACCGAGCAGGGGC...ATGTCGGGGAGTGGCCGGGAGTTGGGCGAGTACGGGCTGCAGGCATACACTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000548536.1
ENST00000549106.1
CDS-3UTR CCA 90 bp CCTGCTCGGTCTTGCTATCAAAGGGGTTCCCGACCACCCGAGACTTGGCCCGGGGGGATGGTTTTCCCGTaGTACTTATCAGCCCAGCCG +
Preference number: 4 (lower is better)
Translates to: PARSCYQRGSRPPETWPGGMVFP*YLSAQP
Trigger: CGGCTGGGCTGATAAGTACCACGGGAAAACCATCCC...CCCGGGCCAAGTCTCGGGTGGTCGGGAACCCCTTTGATAGCAAGACCGAGCAGG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000548536.1
CDS-3UTR CCA 90 bp CAACATCGTTGGAAGGACACCGGTGGGAGGGGCTGTCCTGTTAATTCTTGGAGACCTCATGGGAGGCAATaGCGGCCCCAGCCGTGGGGC +
Preference number: 4 (lower is better)
Translates to: QHRWKDTGGRGCPVNSWRPHGRQ*RPQPWG
Trigger: GCCCCACGGCTGGGGCCGCCATTGCCTCCCATGAGG...TCTCCAAGAATTAACAGGACAGCCCCTCCCACCGGTGTCCTTCCAACGATGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR CCA 90 bp CCTGCTCGGTCTTGCTATCAAAGGGGTTCCCGACCACCCGAGACTTGGCCCGGGCTCCCAGCAGCAACCTaGATTACGCGGCCAATCTCA +
Preference number: 4 (lower is better)
Translates to: PARSCYQRGSRPPETWPGLPAAT*ITRPIS
Trigger: TGAGATTGGCCGCGTAATCCAGGTTGCTGCTGGGAG...CCCGGGCCAAGTCTCGGGTGGTCGGGAACCCCTTTGATAGCAAGACCGAGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548536.1
CDS-3UTR CCA 90 bp TGTGACAGTTTTCACTTCAGTGTATGCCTGCAGCCCGTACTCGCCCAACTCCCGCGACCACCCGAGACTTaGCCCGGGCAACGCTCCGCT +
Preference number: 4 (lower is better)
Translates to: CDSFHFSVCLQPVLAQLPRPPET*PGQRSA
Trigger: AGCGGAGCGTTGCCCGGGCCAAGTCTCGGGTGGTCG...CGGGAGTTGGGCGAGTACGGGCTGCAGGCATACACTGAAGTGAAAACTGTCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548536.1
ENST00000549106.1
CDS-3UTR CCA 90 bp CAGTGTATGCCTGCAGCCCGTACTCGCCCAACTCCCGGCCACTCCCCGACATCTCCTCCTCCTTGGCGATaGTCATGCCATCCTGCACAT +
Preference number: 4 (lower is better)
Translates to: QCMPAARTRPTPGHSPTSPPPWR*SCHPAH
Trigger: ATGTGCAGGATGGCATGACCATCGCCAAGGAGGAGG...AGATGTCGGGGAGTGGCCGGGAGTTGGGCGAGTACGGGCTGCAGGCATACACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549106.1
3UTR CAA 72 bp AGCCAGACATTCGGGGCCTCTACCGGTCTCCGCCTCTaGGTGGTAGTGGTCCCCCAAGCCCAGCTGTCTTTT +
Preference number: 4 (lower is better)
Translates to: SQTFGASTGLRL*VVVVPQAQLSF
Trigger: AAAAGACAGCTGGGCTTGGGGGACCACTACCACCAAGAGGCGGAGACCGGTAGAGGCCCCGAATGTCTGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR TCA 90 bp CAGCCCGTACGTGGAATTGTTGGCTCTCCCAACAACCTCCTCTATGGTCTTGAACAGCCGGCCCCTGTGTaGTGCGTCCATGCGGCGCCA +
Preference number: 4 (lower is better)
Translates to: QPVRGIVGSPNNLLYGLEQPAPV*CVHAAP
Trigger: TGGCGCCGCATGGACGCATCACACAGGGGCCGGCTG...TTCAAGACCATAGAGGAGGTTGTTGGGAGAGCCAACAATTCCACGTACGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548536.1
CDS-3UTR TCA 90 bp TTCCCGACCACCCGAGACTTGGCCCGGGCAACGCTCCGCTCCACAAACTCATCAATCCAGGCACAATGTTaGCCACACCAGGGGGAAAGC +
Preference number: 4 (lower is better)
Translates to: FPTTRDLARATLRSTNSSIQAQC*PHQGES
Trigger: GCTTTCCCCCTGGTGTGGTCAACATTGTGCCTGGAT...TGATGAGTTTGTGGAGCGGAGCGTTGCCCGGGCCAAGTCTCGGGTGGTCGGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548536.1
CDS-3UTR TCA 90 bp GCAGTTGACCCACACAGTGCCCGCCTGGAGGGCCTGGGACAGGTAATTGGCCTTTGTCCAAATCCTTTGTaGAGACAGCTGCGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: AVDPHSARLEGLGQVIGLCPNPL*RQLRPA
Trigger: GGCTGGCCGCAGCTGTCTTCACAAAGGATTTGGACA...AAGGCCAATTACCTGTCCCAGGCCCTCCAGGCGGGCACTGTGTGGGTCAACTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548536.1
CDS-3UTR GCA 90 bp CAGTTTTCACTTCAGTGTATGCCTGCAGCCCGTACTCGCCCAACTCCCGGCCACTGTGTGATGCGTCCATaGGGCGCCAAGGTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: QFSLQCMPAARTRPTPGHCVMRP*GAKVSP
Trigger: TGGGCTCACCTTGGCGCCGCATGGACGCATCACACA...GTGGCCGGGAGTTGGGCGAGTACGGGCTGCAGGCATACACTGAAGTGAAAACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548536.1
CDS-3UTR GCA 90 bp TTCAGTGTATGCCTGCAGCCCGTACTCGCCCAACTCCCGGCCACTCCCCGACATGCGGTGAGGGGTGTCTaGTCAGCTACCTTCATCACA +
Preference number: 4 (lower is better)
Translates to: FSVCLQPVLAQLPATPRHAVRGV*SATFIT
Trigger: TGTGATGAAGGTAGCTGAGCAGACACCCCTCACCGC...ATGTCGGGGAGTGGCCGGGAGTTGGGCGAGTACGGGCTGCAGGCATACACTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548536.1
CDS-3UTR GCA 90 bp ATGCCACTTTGTCCACATCCTCATGGGAGGCAATGGCGGCCCCAGCCGTGGGGCTTTCACTTCAGTGTATaGCTGCAGCCCGTACTCGCC +
Preference number: 4 (lower is better)
Translates to: MPLCPHPHGRQWRPQPWGFHFSV*LQPVLA
Trigger: GGCGAGTACGGGCTGCAGGCATACACTGAAGTGAAA...GCCCCACGGCTGGGGCCGCCATTGCCTCCCATGAGGATGTGGACAAAGTGGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548536.1
3UTR CAA 72 bp ACGCGGCCAATCTCAGTGGAGCCTGTGAATGCCACTTaGTCCACATCCTCATGGGAGGCAATGGCGGCCCCA +
Preference number: 4 (lower is better)
Translates to: TRPISVEPVNAT*STSSWEAMAAP
Trigger: TGGGGCCGCCATTGCCTCCCATGAGGATGTGGACAAAGTGGCATTCACAGGCTCCACTGAGATTGGCCGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548536.1
3UTR CAA 72 bp GTCTTGCTATCAAAGGGGTTCCCGACCACCCGAGACTaGGCCCGGGCAACGCTCCGCTCCACAAACTCATCA +
Preference number: 4 (lower is better)
Translates to: VLLSKGFPTTRD*ARATLRSTNSS
Trigger: TGATGAGTTTGTGGAGCGGAGCGTTGCCCGGGCCAAGTCTCGGGTGGTCGGGAACCCCTTTGATAGCAAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548536.1
CDS-3UTR TCA 90 bp TTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCATGATCTGGGTGGCGGCGGCTaGCAAGAGGCGGCGGCCCAG +
Preference number: 4 (lower is better)
Translates to: LLILLNFPSMAEGGSLHDLGGGG*QEAAAQ
Trigger: CTGGGCCGCCGCCTCTTGTCAGCCGCCGCCACCCAG...ATCATGCAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261733.7
ENST00000416293.7
CDS-3UTR TCA 90 bp CCTGCTCGGTCTTGCTATCAAAGGGGTTCCCGACCACCCGAGACTTGGCCCGGGGGAATGTTTTCCTGCTaGCGGCATCGTGCCATTCAT +
Preference number: 4 (lower is better)
Translates to: PARSCYQRGSRPPETWPGGMFSC*RHRAIH
Trigger: ATGAATGGCACGATGCCGTCAGCAGGAAAACATTCC...CCCGGGCCAAGTCTCGGGTGGTCGGGAACCCCTTTGATAGCAAGACCGAGCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000548536.1
CDS-3UTR TCA 90 bp GCTCAGCTACCTTCATCACAACCACGTTTCCAGTTGCCAAGGCTGGGCCCAGCTAGCACTGGCCCTGGTTaGAGAACAGGGCGAAGTGGG +
Preference number: 4 (lower is better)
Translates to: AQLPSSQPRFQLPRLGPASTGPG*RTGRSG
Trigger: CCCACTTCGCCCTGTTCTTCAACCAGGGCCAGTGCT...AGCTGGGCCCAGCCTTGGCAACTGGAAACGTGGTTGTGATGAAGGTAGCTGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548536.1
CDS-3UTR TCA 90 bp TGTCCAGGGTCTCCAAGGCCGCCAGGTAGGTCCGGTCCCGCTCGATCAGATCGGAGGATCTTCTTAAACTaGGTTTCATCCACCTGCGGC +
Preference number: 4 (lower is better)
Translates to: CPGSPRPPGRSGPARSDRRIFLN*VSSTCG
Trigger: GCCGCAGGTGGATGAAACTCAGTTTAAGAAGATCCT...CCGATCTGATCGAGCGGGACCGGACCTACCTGGCGGCCTTGGAGACCCTGGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548536.1
CDS-3UTR TCA 90 bp TTCAGTGTATGCCTGCAGCCCGTACTCGCCCAACTCCCGGCCACTCCCCGACATACACATCATAGCAGTTaGCCCTCCTCCTTGGCGATG +
Preference number: 4 (lower is better)
Translates to: FSVCLQPVLAQLPATPRHTHHSS*PSSLAM
Trigger: CATCGCCAAGGAGGAGGGTCAACTGCTATGATGTGT...ATGTCGGGGAGTGGCCGGGAGTTGGGCGAGTACGGGCTGCAGGCATACACTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549106.1
CDS-3UTR GCA 90 bp CAGTTTTCACTTCAGTGTATGCCTGCAGCCCGTACTCGCCCAACTCCCGGCCACTTCCACGGAATGATCTaGCCGCACACCCCCACAGGT +
Preference number: 4 (lower is better)
Translates to: QFSLQCMPAARTRPTPGHFHGMI*PHTPTG
Trigger: ACCTGTGGGGGTGTGCGGGCAGATCATTCCGTGGAA...GTGGCCGGGAGTTGGGCGAGTACGGGCTGCAGGCATACACTGAAGTGAAAACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548536.1
CDS-3UTR GCA 90 bp ACCTCTCCAGTGGACGGATTGACGGTGGGGAATGTTTTCCTGCTGACGGCATCGCACGGTCAGCAGCAATaGCCCCACCACACAGCAGCT +
Preference number: 4 (lower is better)
Translates to: TSPVDGLTVGNVFLLTASHGQQQ*PHHTAA
Trigger: AGCTGCTGTGTGGTGGGGGCATTGCTGCTGACCGTG...CGATGCCGTCAGCAGGAAAACATTCCCCACCGTCAATCCGTCCACTGGAGAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000548536.1
CDS-3UTR CCA 90 bp GCCCGTACTCGCCCAACTCCCGGCCACTCCCCGACATCTTGTAGCCACCAAAGGAGAAGTCTCCGTCAATaGGGATGGTTTTCCCGTGGT +
Preference number: 4 (lower is better)
Translates to: ARTRPTPGHSPTSCSHQRRSLRQ*GWFSRG
Trigger: ACCACGGGAAAACCATCCCCATTGACGGAGACTTCT...CCTTTGGTGGCTACAAGATGTCGGGGAGTGGCCGGGAGTTGGGCGAGTACGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548536.1
CDS-3UTR CCA 90 bp GACAGTTTTCACTTCAGTGTATGCCTGCAGCCCGTACTCGCCCAACTCCCGGCCAAGAACAGGGCGAAGTaGGCCTGTTCCACGGCCCAA +
Preference number: 4 (lower is better)
Translates to: DSFHFSVCLQPVLAQLPAKNRAK*ACSTAQ
Trigger: TTGGGCCGTGGAACAGGCCCACTTCGCCCTGTTCTT...GGCCGGGAGTTGGGCGAGTACGGGCTGCAGGCATACACTGAAGTGAAAACTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548536.1
CDS-3UTR CCA 90 bp CTATGGATTCCTGTTAATCTGTCCCAGCCTTGGGCTACCACACCTGCTTTGCACCGACCACCCGAGACTTaGCCCGGGCAACGCTCCGCT +
Preference number: 4 (lower is better)
Translates to: LWIPVNLSQPWATTPALHRPPET*PGQRSA
Trigger: AGCGGAGCGTTGCCCGGGCCAAGTCTCGGGTGGTCG...GTGCAAAGCAGGTGTGGTAGCCCAAGGCTGGGACAGATTAACAGGAATCCATAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR CCA 90 bp CCTGGGCTATGGATTCCTGTTAATCTGTCCCAGCCTTGGGCTACCACACCTGCTAGCCTCCCGATCAGCTaGGACTACAGGCGCCCACCA +
Preference number: 4 (lower is better)
Translates to: PGLWIPVNLSQPWATTPASLPIS*DYRRPP
Trigger: TGGTGGGCGCCTGTAGTCCCAGCTGATCGGGAGGCT...AGCAGGTGTGGTAGCCCAAGGCTGGGACAGATTAACAGGAATCCATAGCCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR TCA 90 bp AGTGGGCTGGATGAAGTAACCACGGTCAGCAGCAATGCCCCCACCACACAGCAGCTCCAGTGGACGGATTaGCGGTGGGGAATGTTTTCC +
Preference number: 4 (lower is better)
Translates to: SGLDEVTTVSSNAPTTQQLQWTD*RWGMFS
Trigger: GGAAAACATTCCCCACCGTCAATCCGTCCACTGGAG...CTGCTGTGTGGTGGGGGCATTGCTGCTGACCGTGGTTACTTCATCCAGCCCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000548536.1
CDS-3UTR TCA 90 bp CCTGGGCTATGGATTCCTGTTAATCTGTCCCAGCCTTGGGCTACCACACCTGCTAGCACTGGCCCTGGTTaGAGAACAGGGCGAAGTGGG +
Preference number: 4 (lower is better)
Translates to: PGLWIPVNLSQPWATTPASTGPG*RTGRSG
Trigger: CCCACTTCGCCCTGTTCTTCAACCAGGGCCAGTGCT...AGCAGGTGTGGTAGCCCAAGGCTGGGACAGATTAACAGGAATCCATAGCCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR TCA 90 bp CCTGGGCTATGGATTCCTGTTAATCTGTCCCAGCCTTGGGCTACCACACCTGCTAAGCCATCCAGGTGCTaGGGCAAGAGACCGAGGGCA +
Preference number: 4 (lower is better)
Translates to: PGLWIPVNLSQPWATTPAKPSRC*GKRPRA
Trigger: TGCCCTCGGTCTCTTGCCTCAGCACCTGGATGGCTT...AGCAGGTGTGGTAGCCCAAGGCTGGGACAGATTAACAGGAATCCATAGCCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR GCA 90 bp CATAGGGCTTGCCATTGTCCAGGGTCTCCAAGGCCGCCAGGTAGGTCCGGTCCCATGGTCATGCCATCCTaGACATCTCCAAACACAGTG +
Preference number: 4 (lower is better)
Translates to: HRACHCPGSPRPPGRSGPMVMPS*TSPNTV
Trigger: CACTGTGTTTGGAGATGTGCAGGATGGCATGACCAT...GGGACCGGACCTACCTGGCGGCCTTGGAGACCCTGGACAATGGCAAGCCCTATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548536.1
CDS-3UTR GCA 90 bp CCTGGGCTATGGATTCCTGTTAATCTGTCCCAGCCTTGGGCTACCACACCTGCTAGGCGTGAGCCACTGTaGCCGGCCTTTGCCAGGTAT +
Preference number: 4 (lower is better)
Translates to: PGLWIPVNLSQPWATTPARREPL*PAFARY
Trigger: ATACCTGGCAAAGGCCGGGCACAGTGGCTCACGCCT...AGCAGGTGTGGTAGCCCAAGGCTGGGACAGATTAACAGGAATCCATAGCCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR CCA 90 bp TTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCATGATGGGGCAGGCACGGCCTaGGTGGCGGCGGCTGACAAG +
Preference number: 4 (lower is better)
Translates to: LLILLNFPSMAEGGSLHDGAGTA*VAAADK
Trigger: CTTGTCAGCCGCCGCCACCCAGGCCGTGCCTGCCCC...ATCATGCAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261733.7
ENST00000416293.7
CDS-3UTR CCA 90 bp TTGTTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCATCCTCGGGCTGCTGGTTaGGGGCAGGCACGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: LLLILLNFPSMAEGGSLHPRAAG*GQARPG
Trigger: CCCAGGCCGTGCCTGCCCCCAACCAGCAGCCCGAGG...ATGCAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261733.7
ENST00000416293.7
CDS-3UTR CCA 90 bp TTTCACTTCAGTGTATGCCTGCAGCCCGTACTCGCCCAACTCCCGGCCACTCCCTCTCCTCCTTGGCGATaGTCATGCCATCCTGCACAT +
Preference number: 4 (lower is better)
Translates to: FHFSVCLQPVLAQLPATPSPPWR*SCHPAH
Trigger: ATGTGCAGGATGGCATGACCATCGCCAAGGAGGAGA...GGGAGTGGCCGGGAGTTGGGCGAGTACGGGCTGCAGGCATACACTGAAGTGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548536.1
CDS-3UTR CCA 90 bp TTCAGTGTATGCCTGCAGCCCGTACTCGCCCAACTCCCGGCCACTCCCCGACATCGTACGTGGAATTGTTaGCTCTCCCAACAACCTCCT +
Preference number: 4 (lower is better)
Translates to: FSVCLQPVLAQLPATPRHRTWNC*LSQQPP
Trigger: AGGAGGTTGTTGGGAGAGCCAACAATTCCACGTACG...ATGTCGGGGAGTGGCCGGGAGTTGGGCGAGTACGGGCTGCAGGCATACACTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548536.1
CDS-3UTR CCA 90 bp ACAGTTTTCACTTCAGTGTATGCCTGCAGCCCGTACTCGCCCAACTCCCGGCCACGGCCAGCCCGTACGTaGAATTGTTGGCTCTCCCAA +
Preference number: 4 (lower is better)
Translates to: TVFTSVYACSPYSPNSRPRPART*NCWLSQ
Trigger: TTGGGAGAGCCAACAATTCCACGTACGGGCTGGCCG...TGGCCGGGAGTTGGGCGAGTACGGGCTGCAGGCATACACTGAAGTGAAAACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548536.1
CDS-3UTR TCA 90 bp GGGAAATTCCACGGAATGATCTGCCCGCACACCCCCACAGGTTCATGGCGTGTGCCACCAGGTAGGAGATaGCATAGGGCTTGCCATTGT +
Preference number: 4 (lower is better)
Translates to: GKFHGMICPHTPTGSWRVPPGRR*HRACHC
Trigger: ACAATGGCAAGCCCTATGTCATCTCCTACCTGGTGG...CACACGCCATGAACCTGTGGGGGTGTGCGGGCAGATCATTCCGTGGAATTTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548536.1
CDS-3UTR TCA 90 bp TTCAGTGTATGCCTGCAGCCCGTACTCGCCCAACTCCCGGCCACTCCCCGACATAGGATCTTCTTAAACTaGGTTTCATCCACCTGCGGC +
Preference number: 4 (lower is better)
Translates to: FSVCLQPVLAQLPATPRHRIFLN*VSSTCG
Trigger: GCCGCAGGTGGATGAAACTCAGTTTAAGAAGATCCT...ATGTCGGGGAGTGGCCGGGAGTTGGGCGAGTACGGGCTGCAGGCATACACTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548536.1
ENST00000549106.1
CDS-3UTR TCA 90 bp CCTGGGCTATGGATTCCTGTTAATCTGTCCCAGCCTTGGGCTACCACACCTGCTTTGTCCAAGTTCCCCTaGCCAGCTCTGGGACCCTGT +
Preference number: 4 (lower is better)
Translates to: PGLWIPVNLSQPWATTPALSKFP*PALGPC
Trigger: ACAGGGTCCCAGAGCTGGTCAGGGGAACTTGGACAA...AGCAGGTGTGGTAGCCCAAGGCTGGGACAGATTAACAGGAATCCATAGCCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR TCA 90 bp GTGGTGCTGTGCTTCAGTGGTCACGCTCCTAGTCTGCCTTCATGTTCCATCCTGCTGCCAATCAGAAAATaGGAGCTGCCCAGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: VVLCFSGHAPSLPSCSILLPIRK*ELPSLA
Trigger: GGCCAGGCTGGGCAGCTCTCATTTTCTGATTGGCAG...CAGGATGGAACATGAAGGCAGACTAGGAGCGTGACCACTGAAGCACAGCACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR CCA 90 bp GGTGTCTGCTCAGCTACCTTCATCACAACCACGTTTCCAGTTGCCAAGGCTGGGTCCAGTTGCCAAGGCTaGGCCCAGCTTCCATGCTTG +
Preference number: 4 (lower is better)
Translates to: GVCSATFITTTFPVAKAGSSCQG*AQLPCL
Trigger: CAAGCATGGAAGCTGGGCCCAGCCTTGGCAACTGGA...CCCAGCCTTGGCAACTGGAAACGTGGTTGTGATGAAGGTAGCTGAGCAGACACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548536.1
CDS-3UTR CCA 90 bp GTTTTGTTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCCTCATGGGAGGCAATaGCGGCCCCAGCCGTGGGGC +
Preference number: 4 (lower is better)
Translates to: VLLLILLNFPSMAEGGSLPHGRQ*RPQPWG
Trigger: GCCCCACGGCTGGGGCCGCCATTGCCTCCCATGAGG...CAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAACAAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261733.7
ENST00000416293.7
CDS-3UTR CCA 90 bp GTGGTGCTGTGCTTCAGTGGTCACGCTCCTAGTCTGCCTTCATGTTCCATCCTGCACTGCACTCCAGCCTaGACGACGGAGTTAGACCCT +
Preference number: 4 (lower is better)
Translates to: VVLCFSGHAPSLPSCSILHCTPA*TTELDP
Trigger: AGGGTCTAACTCCGTCGTCCAGGCTGGAGTGCAGTG...CAGGATGGAACATGAAGGCAGACTAGGAGCGTGACCACTGAAGCACAGCACCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR TCA 90 bp TCCGAATACCCAGGGAGATTAGGTGGTTCATCACCTGAGAGCTTTGTTTTTACTCAGCCGGCCCCTGTGTaGTGCGTCCATGCGGCGCCA +
Preference number: 4 (lower is better)
Translates to: SEYPGRLGGSSPESFVFTQPAPV*CVHAAP
Trigger: TGGCGCCGCATGGACGCATCACACAGGGGCCGGCTG...AGTAAAAACAAAGCTCTCAGGTGATGAACCACCTAATCTCCCTGGGTATTCGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR TCA 90 bp ACCTCTCCAGTGGACGGATTGACGGTGGGGAATGTTTTCCTGCTGACGGCATCGGAAAGCCAGCCTCCTTaGTCAGGTTGGCCACATAGA +
Preference number: 4 (lower is better)
Translates to: TSPVDGLTVGNVFLLTASESQPP*SGWPHR
Trigger: TCTATGTGGCCAACCTGATCAAGGAGGCTGGCTTTC...CGATGCCGTCAGCAGGAAAACATTCCCCACCGTCAATCCGTCCACTGGAGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548536.1
CDS-3UTR TCA 90 bp CCTGGGCTATGGATTCCTGTTAATCTGTCCCAGCCTTGGGCTACCACACCTGCTTGTCCAAATCCTTTGTaGAGACAGCTGCGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: PGLWIPVNLSQPWATTPACPNPL*RQLRPA
Trigger: GGCTGGCCGCAGCTGTCTTCACAAAGGATTTGGACA...AGCAGGTGTGGTAGCCCAAGGCTGGGACAGATTAACAGGAATCCATAGCCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR GCA 90 bp GCTCAGCTACCTTCATCACAACCACGTTTCCAGTTGCCAAGGCTGGGCCCAGCTCCCAGCTTCCATGCTTaGATCAGGAGCGGGAAATTC +
Preference number: 4 (lower is better)
Translates to: AQLPSSQPRFQLPRLGPAPSFHA*IRSGKF
Trigger: GAATTTCCCGCTCCTGATGCAAGCATGGAAGCTGGG...AGCTGGGCCCAGCCTTGGCAACTGGAAACGTGGTTGTGATGAAGGTAGCTGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548536.1
CDS-3UTR GCA 90 bp GTGGTGCTGTGCTTCAGTGGTCACGCTCCTAGTCTGCCTTCATGTTCCATCCTGAACCACGTTTCCAGTTaGCAAGGCTGGGCCCAGCTT +
Preference number: 4 (lower is better)
Translates to: VVLCFSGHAPSLPSCSILNHVSS*QGWAQL
Trigger: AAGCTGGGCCCAGCCTTGGCAACTGGAAACGTGGTT...CAGGATGGAACATGAAGGCAGACTAGGAGCGTGACCACTGAAGCACAGCACCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR GCA 90 bp CAACATCGTTGGAAGGACACCGGTGGGAGGGGCTGTCCTGTTAATTCTTGGAGAGCCCCTGCTCGGTCTTaGTATCAAAGGGGTTCCCGA +
Preference number: 4 (lower is better)
Translates to: QHRWKDTGGRGCPVNSWRAPARS*YQRGSR
Trigger: TCGGGAACCCCTTTGATAGCAAGACCGAGCAGGGGC...TCTCCAAGAATTAACAGGACAGCCCCTCCCACCGGTGTCCTTCCAACGATGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR GCA 90 bp ACTGTGACAGTTTTCACTTCAGTGTATGCCTGCAGCCCGTACTCGCCCAACTCCCTTTGTGAAGACAGCTaGGGCCAGCCCGTACGTGGA +
Preference number: 4 (lower is better)
Translates to: TVTVFTSVYACSPYSPNSLCEDS*GQPVRG
Trigger: TCCACGTACGGGCTGGCCGCAGCTGTCTTCACAAAG...GGAGTTGGGCGAGTACGGGCTGCAGGCATACACTGAAGTGAAAACTGTCACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548536.1
CDS-3UTR CCA 90 bp TTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCATGATAAGACCTCGGGCTGCTaGTTGGGGGCAGGCACGGCC +
Preference number: 4 (lower is better)
Translates to: LLILLNFPSMAEGGSLHDKTSGC*LGAGTA
Trigger: GGCCGTGCCTGCCCCCAACCAGCAGCCCGAGGTCTT...ATCATGCAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261733.7
ENST00000416293.7
CDS-3UTR CCA 90 bp TTTCACTTCAGTGTATGCCTGCAGCCCGTACTCGCCCAACTCCCGGCCACTCCCCTCCGTCAATGGGGATaGTTTTCCCGTGGTACTTAT +
Preference number: 4 (lower is better)
Translates to: FHFSVCLQPVLAQLPATPLRQWG*FSRGTY
Trigger: ATAAGTACCACGGGAAAACCATCCCCATTGACGGAG...GGGAGTGGCCGGGAGTTGGGCGAGTACGGGCTGCAGGCATACACTGAAGTGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000548536.1
CDS-3UTR CCA 90 bp TTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCATGATCGACCACCCGAGACTTaGCCCGGGCAACGCTCCGCT +
Preference number: 4 (lower is better)
Translates to: LLILLNFPSMAEGGSLHDRPPET*PGQRSA
Trigger: AGCGGAGCGTTGCCCGGGCCAAGTCTCGGGTGGTCG...ATCATGCAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261733.7
ENST00000416293.7
ENST00000549106.1
CDS-3UTR CCA 90 bp CCTGGGCTATGGATTCCTGTTAATCTGTCCCAGCCTTGGGCTACCACACCTGCTCTAACCGTCTCCCTGTaGTGCTGTGCTTCAGTGGTC +
Preference number: 4 (lower is better)
Translates to: PGLWIPVNLSQPWATTPALTVSL*CCASVV
Trigger: GACCACTGAAGCACAGCACCACAGGGAGACGGTTAG...AGCAGGTGTGGTAGCCCAAGGCTGGGACAGATTAACAGGAATCCATAGCCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR CCA 90 bp CAACATCGTTGGAAGGACACCGGTGGGAGGGGCTGTCCTGTTAATTCTTGGAGACAGGATAGAGTGCAGTaGCGCGATCTCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: QHRWKDTGGRGCPVNSWRQDRVQ*RDLGSL
Trigger: CAGTGAGCCGAGATCGCGCCACTGCACTCTATCCTG...TCTCCAAGAATTAACAGGACAGCCCCTCCCACCGGTGTCCTTCCAACGATGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR CAA 72 bp GTTTCCAGTTGCCAAGGCTGGGCCCAGCTTCCATGCTaGCATCAGGAGCGGGAAATTCCACGGAATGATCTG +
Preference number: 4 (lower is better)
Translates to: VSSCQGWAQLPC*HQEREIPRNDL
Trigger: CAGATCATTCCGTGGAATTTCCCGCTCCTGATGCAAGCATGGAAGCTGGGCCCAGCCTTGGCAACTGGAAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548536.1
3UTR CAA 72 bp GTGAAGACAGCTGCGGCCAGCCCGTACGTGGAATTGTaGGCTCTCCCAACAACCTCCTCTATGGTCTTGAAC +
Preference number: 4 (lower is better)
Translates to: VKTAAASPYVEL*ALPTTSSMVLN
Trigger: GTTCAAGACCATAGAGGAGGTTGTTGGGAGAGCCAACAATTCCACGTACGGGCTGGCCGCAGCTGTCTTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548536.1
CDS-3UTR TCA 90 bp CAACATCGTTGGAAGGACACCGGTGGGAGGGGCTGTCCTGTTAATTCTTGGAGACTCCAGTGGACGGATTaGCGGTGGGGAATGTTTTCC +
Preference number: 4 (lower is better)
Translates to: QHRWKDTGGRGCPVNSWRLQWTD*RWGMFS
Trigger: GGAAAACATTCCCCACCGTCAATCCGTCCACTGGAG...TCTCCAAGAATTAACAGGACAGCCCCTCCCACCGGTGTCCTTCCAACGATGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR TCA 90 bp CCTGGGCTATGGATTCCTGTTAATCTGTCCCAGCCTTGGGCTACCACACCTGCTCCACCAGGTAGGAGATaGCATAGGGCTTGCCATTGT +
Preference number: 4 (lower is better)
Translates to: PGLWIPVNLSQPWATTPAPPGRR*HRACHC
Trigger: ACAATGGCAAGCCCTATGTCATCTCCTACCTGGTGG...AGCAGGTGTGGTAGCCCAAGGCTGGGACAGATTAACAGGAATCCATAGCCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR TCA 90 bp GTCCAAATCCTTTGTGAAGACAGCTGCGGCCAGCCCGTACGTGGAATTGTTGGCCATGGCGTGTGTAGCTaGAGAAGTCTCCGTCAATGG +
Preference number: 4 (lower is better)
Translates to: VQILCEDSCGQPVRGIVGHGVCS*RSLRQW
Trigger: CCATTGACGGAGACTTCTTCAGCTACACACGCCATG...GCCAACAATTCCACGTACGGGCTGGCCGCAGCTGTCTTCACAAAGGATTTGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548536.1
CDS-3UTR TCA 90 bp CTATGGATTCCTGTTAATCTGTCCCAGCCTTGGGCTACCACACCTGCTTTGCACGGAAATTCCACGGAATaGTCTGCCCGCACACCCCCA +
Preference number: 4 (lower is better)
Translates to: LWIPVNLSQPWATTPALHGNSTE*SARTPP
Trigger: TGGGGGTGTGCGGGCAGATCATTCCGTGGAATTTCC...GTGCAAAGCAGGTGTGGTAGCCCAAGGCTGGGACAGATTAACAGGAATCCATAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR TCA 90 bp GGGAAATTCCACGGAATGATCTGCCCGCACACCCCCACAGGTTCATGGCGTGTGATCCATATCGGCATCTaGCATGATGATGTTGGGGCT +
Preference number: 4 (lower is better)
Translates to: GKFHGMICPHTPTGSWRVIHIGI*HDDVGA
Trigger: AGCCCCAACATCATCATGTCAGATGCCGATATGGAT...CACACGCCATGAACCTGTGGGGGTGTGCGGGCAGATCATTCCGTGGAATTTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548536.1
CDS-3UTR TCA 90 bp ACAGATGACCTCTCCAGTGGACGGATTGACGGTGGGGAATGTTTTCCTGCTGACACACATCATAGCAGTTaGCCCACACAGTGCCCGCCT +
Preference number: 4 (lower is better)
Translates to: TDDLSSGRIDGGECFPADTHHSS*PTQCPP
Trigger: AGGCGGGCACTGTGTGGGTCAACTGCTATGATGTGT...GTCAGCAGGAAAACATTCCCCACCGTCAATCCGTCCACTGGAGAGGTCATCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548536.1
CDS-3UTR TCA 90 bp CTATGGATTCCTGTTAATCTGTCCCAGCCTTGGGCTACCACACCTGCTTTGCACGGCAGCAGTGAGCTATaGTCGTGCCACTGCACTCCA +
Preference number: 4 (lower is better)
Translates to: LWIPVNLSQPWATTPALHGSSEL*SCHCTP
Trigger: TGGAGTGCAGTGGCACGATCATAGCTCACTGCTGCC...GTGCAAAGCAGGTGTGGTAGCCCAAGGCTGGGACAGATTAACAGGAATCCATAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR GCA 90 bp TTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCATGATCAGAAGACCTCGGGCTaGTGGTTGGGGGCAGGCACG +
Preference number: 4 (lower is better)
Translates to: LLILLNFPSMAEGGSLHDQKTSG*WLGAGT
Trigger: CGTGCCTGCCCCCAACCAGCAGCCCGAGGTCTTCTG...ATCATGCAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261733.7
ENST00000416293.7
CDS-3UTR GCA 90 bp CTCCCAACAACCTCCTCTATGGTCTTGAACTTCAGGATCTGCATCACTGGCCCGACTTCAGTGTATGCCTaGAGCCCGTACTCGCCCAAC +
Preference number: 4 (lower is better)
Translates to: LPTTSSMVLNFRICITGPTSVYA*SPYSPN
Trigger: GTTGGGCGAGTACGGGCTGCAGGCATACACTGAAGT...CGGGCCAGTGATGCAGATCCTGAAGTTCAAGACCATAGAGGAGGTTGTTGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548536.1
CDS-3UTR GCA 90 bp GTGGTGCTGTGCTTCAGTGGTCACGCTCCTAGTCTGCCTTCATGTTCCATCCTGGCTGGAGTGAAGTGGTaGAATCACAGCTCACTGCAG +
Preference number: 4 (lower is better)
Translates to: VVLCFSGHAPSLPSCSILAGVKW*NHSSLQ
Trigger: CTGCAGTGAGCTGTGATTGCACCACTTCACTCCAGC...CAGGATGGAACATGAAGGCAGACTAGGAGCGTGACCACTGAAGCACAGCACCAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR CCA 90 bp CTCTGTTTTATCCTTCACAGAATAAGCCAAATGAGAGTTGGAAGTGACTGCAGAGGGGCAGGCACGGCCTaGGTGGCGGCGGCTGACAAG +
Preference number: 4 (lower is better)
Translates to: LCFILHRISQMRVGSDCRGAGTA*VAAADK
Trigger: CTTGTCAGCCGCCGCCACCCAGGCCGTGCCTGCCCC...TCTGCAGTCACTTCCAACTCTCATTTGGCTTATTCTGTGAAGGATAAAACAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR CCA 90 bp TTCCATCAATGGCTGAGGGAGGAAGCTTGCATGATTCTTATGAGTTCTTCTGAGAAGACCTCGGGCTGCTaGTTGGGGGCAGGCACGGCC +
Preference number: 4 (lower is better)
Translates to: FHQWLREEACMILMSSSEKTSGC*LGAGTA
Trigger: GGCCGTGCCTGCCCCCAACCAGCAGCCCGAGGTCTT...CTCAGAAGAACTCATAAGAATCATGCAAGCTTCCTCCCTCAGCCATTGATGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548536.1
CDS-3UTR CCA 90 bp CAGCCCGTACGTGGAATTGTTGGCTCTCCCAACAACCTCCTCTATGGTCTTGAATTGTCCACATCCTCATaGGAGGCAATGGCGGCCCCA +
Preference number: 4 (lower is better)
Translates to: QPVRGIVGSPNNLLYGLELSTSS*EAMAAP
Trigger: TGGGGCCGCCATTGCCTCCCATGAGGATGTGGACAA...TTCAAGACCATAGAGGAGGTTGTTGGGAGAGCCAACAATTCCACGTACGGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548536.1
CDS-3UTR CCA 90 bp TTCCATCAATGGCTGAGGGAGGAAGCTTGCATGATTCTTATGAGTTCTTCTGAGCGACCACCCGAGACTTaGCCCGGGCAACGCTCCGCT +
Preference number: 4 (lower is better)
Translates to: FHQWLREEACMILMSSSERPPET*PGQRSA
Trigger: AGCGGAGCGTTGCCCGGGCCAAGTCTCGGGTGGTCG...CTCAGAAGAACTCATAAGAATCATGCAAGCTTCCTCCCTCAGCCATTGATGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548536.1
ENST00000549106.1
CDS-3UTR CCA 90 bp AGTGGGCTGGATGAAGTAACCACGGTCAGCAGCAATGCCCCCACCACACAGCAGCCTGGGACAGGTAATTaGCCTTGTCCAAATCCTTTG +
Preference number: 4 (lower is better)
Translates to: SGLDEVTTVSSNAPTTQQPGTGN*PCPNPL
Trigger: CAAAGGATTTGGACAAGGCCAATTACCTGTCCCAGG...CTGCTGTGTGGTGGGGGCATTGCTGCTGACCGTGGTTACTTCATCCAGCCCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548536.1
CDS-3UTR CCA 90 bp GTTTTGTTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGGAAGTCACTCCCCCTTaGTCCCTTCCCAGGGCCCCC +
Preference number: 4 (lower is better)
Translates to: VLLLILLNFPSMAEGGSLEVTPP*SLPRAP
Trigger: GGGGGCCCTGGGAAGGGACCAAGGGGGAGTGACTTC...CAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAACAAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR CAA 72 bp TCTGCTCAGCTACCTTCATCACAACCACGTTTCCAGTaGCCAAGGCTGGGCCCAGCTTCCATGCTTGCATCA +
Preference number: 4 (lower is better)
Translates to: SAQLPSSQPRFQ*PRLGPASMLAS
Trigger: TGATGCAAGCATGGAAGCTGGGCCCAGCCTTGGCAACTGGAAACGTGGTTGTGATGAAGGTAGCTGAGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548536.1
3UTR CAA 72 bp TTTGTGAAGACAGCTGCGGCCAGCCCGTACGTGGAATaGTTGGCTCTCCCAACAACCTCCTCTATGGTCTTG +
Preference number: 4 (lower is better)
Translates to: FVKTAAASPYVE*LALPTTSSMVL
Trigger: CAAGACCATAGAGGAGGTTGTTGGGAGAGCCAACAATTCCACGTACGGGCTGGCCGCAGCTGTCTTCACAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548536.1
CDS-3UTR TCA 90 bp CAACATCGTTGGAAGGACACCGGTGGGAGGGGCTGTCCTGTTAATTCTTGGAGACATGGCGTGTGTAGCTaGAGAAGTCTCCGTCAATGG +
Preference number: 4 (lower is better)
Translates to: QHRWKDTGGRGCPVNSWRHGVCS*RSLRQW
Trigger: CCATTGACGGAGACTTCTTCAGCTACACACGCCATG...TCTCCAAGAATTAACAGGACAGCCCCTCCCACCGGTGTCCTTCCAACGATGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR TCA 90 bp CTATGGATTCCTGTTAATCTGTCCCAGCCTTGGGCTACCACACCTGCTTTGCACATCCAGGCACAATGTTaGCCACACCAGGGGGAAAGC +
Preference number: 4 (lower is better)
Translates to: LWIPVNLSQPWATTPALHIQAQC*PHQGES
Trigger: GCTTTCCCCCTGGTGTGGTCAACATTGTGCCTGGAT...GTGCAAAGCAGGTGTGGTAGCCCAAGGCTGGGACAGATTAACAGGAATCCATAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR TCA 90 bp CTATGGATTCCTGTTAATCTGTCCCAGCCTTGGGCTACCACACCTGCTTTGCACAGCTACTCAGGAGGCTaGGGCAGGAGAATTGCTCCA +
Preference number: 4 (lower is better)
Translates to: LWIPVNLSQPWATTPALHSYSGG*GRRIAP
Trigger: TGGAGCAATTCTCCTGCCTCAGCCTCCTGAGTAGCT...GTGCAAAGCAGGTGTGGTAGCCCAAGGCTGGGACAGATTAACAGGAATCCATAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR TCA 90 bp CAACATCGTTGGAAGGACACCGGTGGGAGGGGCTGTCCTGTTAATTCTTGGAGATGTAATCCTAGCACTTaGGAGGCCAAGCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: QHRWKDTGGRGCPVNSWRCNPST*EAKPAG
Trigger: TCCTGCTGGCTTGGCCTCTCAAGTGCTAGGATTACA...TCTCCAAGAATTAACAGGACAGCCCCTCCCACCGGTGTCCTTCCAACGATGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR GCA 90 bp TCCGAATACCCAGGGAGATTAGGTGGTTCATCACCTGAGAGCTTTGTTTTTACTCAGAAGACCTCGGGCTaGTGGTTGGGGGCAGGCACG +
Preference number: 4 (lower is better)
Translates to: SEYPGRLGGSSPESFVFTQKTSG*WLGAGT
Trigger: CGTGCCTGCCCCCAACCAGCAGCCCGAGGTCTTCTG...AGTAAAAACAAAGCTCTCAGGTGATGAACCACCTAATCTCCCTGGGTATTCGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR GCA 90 bp ACAGTTTTCACTTCAGTGTATGCCTGCAGCCCGTACTCGCCCAACTCCCGGCCAATGGTCATGCCATCCTaGACATCTCCAAACACAGTG +
Preference number: 4 (lower is better)
Translates to: TVFTSVYACSPYSPNSRPMVMPS*TSPNTV
Trigger: CACTGTGTTTGGAGATGTGCAGGATGGCATGACCAT...TGGCCGGGAGTTGGGCGAGTACGGGCTGCAGGCATACACTGAAGTGAAAACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548536.1
ENST00000549106.1
CDS-3UTR GCA 90 bp CAACATCGTTGGAAGGACACCGGTGGGAGGGGCTGTCCTGTTAATTCTTGGAGACCTTGGCGATGGTCATaGCATCCTGCACATCTCCAA +
Preference number: 4 (lower is better)
Translates to: QHRWKDTGGRGCPVNSWRPWRWS*HPAHLQ
Trigger: TTGGAGATGTGCAGGATGGCATGACCATCGCCAAGG...TCTCCAAGAATTAACAGGACAGCCCCTCCCACCGGTGTCCTTCCAACGATGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR GCA 90 bp ACAGATGACCTCTCCAGTGGACGGATTGACGGTGGGGAATGTTTTCCTGCTGACCCTTGGCGATGGTCATaGCATCCTGCACATCTCCAA +
Preference number: 4 (lower is better)
Translates to: TDDLSSGRIDGGECFPADPWRWS*HPAHLQ
Trigger: TTGGAGATGTGCAGGATGGCATGACCATCGCCAAGG...GTCAGCAGGAAAACATTCCCCACCGTCAATCCGTCCACTGGAGAGGTCATCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548536.1
CDS-3UTR GCA 90 bp ACAGTTTTCACTTCAGTGTATGCCTGCAGCCCGTACTCGCCCAACTCCCGGCCATTGAACTTCAGGATCTaGATCACTGGCCCGAAGATC +
Preference number: 4 (lower is better)
Translates to: TVFTSVYACSPYSPNSRPLNFRI*ITGPKI
Trigger: GATCTTCGGGCCAGTGATGCAGATCCTGAAGTTCAA...TGGCCGGGAGTTGGGCGAGTACGGGCTGCAGGCATACACTGAAGTGAAAACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548536.1
CDS-3UTR GCA 90 bp GTGGTGCTGTGCTTCAGTGGTCACGCTCCTAGTCTGCCTTCATGTTCCATCCTGGTAGAGACTGCTGATTaGCCTCTTGAACCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: VVLCFSGHAPSLPSCSILVETAD*PLEPSF
Trigger: GAAGCTGGGTTCAAGAGGGCAATCAGCAGTCTCTAC...CAGGATGGAACATGAAGGCAGACTAGGAGCGTGACCACTGAAGCACAGCACCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR GCA 90 bp CTATGGATTCCTGTTAATCTGTCCCAGCCTTGGGCTACCACACCTGCTTTGCACGCTAACCGCAACCTCTaGCTCCCAGGTTCAAGCGAT +
Preference number: 4 (lower is better)
Translates to: LWIPVNLSQPWATTPALHANRNL*LPGSSD
Trigger: ATCGCTTGAACCTGGGAGGCAGAGGTTGCGGTTAGC...GTGCAAAGCAGGTGTGGTAGCCCAAGGCTGGGACAGATTAACAGGAATCCATAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR CCA 90 bp CAGCTCTGTTTTATCCTTCACAGAATAAGCCAAATGAGAGTTGGAAGTGACTGCAAGACCTCGGGCTGCTaGTTGGGGGCAGGCACGGCC +
Preference number: 4 (lower is better)
Translates to: QLCFILHRISQMRVGSDCKTSGC*LGAGTA
Trigger: GGCCGTGCCTGCCCCCAACCAGCAGCCCGAGGTCTT...GCAGTCACTTCCAACTCTCATTTGGCTTATTCTGTGAAGGATAAAACAGAGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR CCA 90 bp CTATGGATTCCTGTTAATCTGTCCCAGCCTTGGGCTACCACACCTGCTTTGCACGTATGTCCCACAAGGTaGCGCCCACACTTAGGAAGC +
Preference number: 4 (lower is better)
Translates to: LWIPVNLSQPWATTPALHVCPTR*RPHLGS
Trigger: GCTTCCTAAGTGTGGGCGCCACCTTGTGGGACATAC...GTGCAAAGCAGGTGTGGTAGCCCAAGGCTGGGACAGATTAACAGGAATCCATAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR TCA 90 bp CAACATCGTTGGAAGGACACCGGTGGGAGGGGCTGTCCTGTTAATTCTTGGAGAGGAATGTTTTCCTGCTaGCGGCATCGTGCCATTCAT +
Preference number: 4 (lower is better)
Translates to: QHRWKDTGGRGCPVNSWRGMFSC*RHRAIH
Trigger: ATGAATGGCACGATGCCGTCAGCAGGAAAACATTCC...TCTCCAAGAATTAACAGGACAGCCCCTCCCACCGGTGTCCTTCCAACGATGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR TCA 90 bp TTGTTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCATCCACATAGAGGGCGGTaGGGGGTGTCTGCTCAGCTA +
Preference number: 4 (lower is better)
Translates to: LLLILLNFPSMAEGGSLHPHRGR*GVSAQL
Trigger: TAGCTGAGCAGACACCCCTCACCGCCCTCTATGTGG...ATGCAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261733.7
ENST00000416293.7
CDS-3UTR TCA 90 bp TTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCATGATAGCACTGGCCCTGGTTaGAGAACAGGGCGAAGTGGG +
Preference number: 4 (lower is better)
Translates to: LLILLNFPSMAEGGSLHDSTGPG*RTGRSG
Trigger: CCCACTTCGCCCTGTTCTTCAACCAGGGCCAGTGCT...ATCATGCAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261733.7
ENST00000416293.7
ENST00000549106.1
CDS-3UTR TCA 90 bp CTATGGATTCCTGTTAATCTGTCCCAGCCTTGGGCTACCACACCTGCTTTGCACGGCGGGAGGATCACTTaGGTCCAGGAGTTTGAAAAC +
Preference number: 4 (lower is better)
Translates to: LWIPVNLSQPWATTPALHGGRIT*VQEFEN
Trigger: GTTTTCAAACTCCTGGACTCAAGTGATCCTCCCGCC...GTGCAAAGCAGGTGTGGTAGCCCAAGGCTGGGACAGATTAACAGGAATCCATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR TCA 90 bp CAACATCGTTGGAAGGACACCGGTGGGAGGGGCTGTCCTGTTAATTCTTGGAGACAACCAGCTCTTGAGTaGACTCATTACCATGGGGGA +
Preference number: 4 (lower is better)
Translates to: QHRWKDTGGRGCPVNSWRQPALE*THYHGG
Trigger: TCCCCCATGGTAATGAGTTCACTCAAGAGCTGGTTG...TCTCCAAGAATTAACAGGACAGCCCCTCCCACCGGTGTCCTTCCAACGATGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR GCA 90 bp GTGGTGTTTCACATGATGGTAGAGACTGCTGATTGCCCTCTTGAACCCAGCTTCGCGGTGAGGGGTGTCTaGTCAGCTACCTTCATCACA +
Preference number: 4 (lower is better)
Translates to: VVFHMMVETADCPLEPSFAVRGV*SATFIT
Trigger: TGTGATGAAGGTAGCTGAGCAGACACCCCTCACCGC...GAAGCTGGGTTCAAGAGGGCAATCAGCAGTCTCTACCATCATGTGAAACACCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR GCA 90 bp TTGTTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCATCACGGTCAGCAGCAATaGCCCCACCACACAGCAGCT +
Preference number: 4 (lower is better)
Translates to: LLLILLNFPSMAEGGSLHHGQQQ*PHHTAA
Trigger: AGCTGCTGTGTGGTGGGGGCATTGCTGCTGACCGTG...ATGCAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261733.7
ENST00000416293.7
ENST00000549106.1
CDS-3UTR CCA 90 bp GTGGTGCTGTGCTTCAGTGGTCACGCTCCTAGTCTGCCTTCATGTTCCATCCTGCTCCGTCAATGGGGATaGTTTTCCCGTGGTACTTAT +
Preference number: 4 (lower is better)
Translates to: VVLCFSGHAPSLPSCSILLRQWG*FSRGTY
Trigger: ATAAGTACCACGGGAAAACCATCCCCATTGACGGAG...CAGGATGGAACATGAAGGCAGACTAGGAGCGTGACCACTGAAGCACAGCACCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR CCA 90 bp CAACATCGTTGGAAGGACACCGGTGGGAGGGGCTGTCCTGTTAATTCTTGGAGACGTACGTGGAATTGTTaGCTCTCCCAACAACCTCCT +
Preference number: 4 (lower is better)
Translates to: QHRWKDTGGRGCPVNSWRRTWNC*LSQQPP
Trigger: AGGAGGTTGTTGGGAGAGCCAACAATTCCACGTACG...TCTCCAAGAATTAACAGGACAGCCCCTCCCACCGGTGTCCTTCCAACGATGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR CCA 90 bp GTGGTGTTTCACATGATGGTAGAGACTGCTGATTGCCCTCTTGAACCCAGCTTCCTGTGCAGCCACAAGTaGAGGCTCTACCCAGAAGCA +
Preference number: 4 (lower is better)
Translates to: VVFHMMVETADCPLEPSFLCSHK*RLYPEA
Trigger: TGCTTCTGGGTAGAGCCTCCACTTGTGGCTGCACAG...GAAGCTGGGTTCAAGAGGGCAATCAGCAGTCTCTACCATCATGTGAAACACCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR TCA 90 bp GTTTTGTTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGGGAAATTCCACGGAATaGTCTGCCCGCACACCCCCA +
Preference number: 4 (lower is better)
Translates to: VLLLILLNFPSMAEGGSLGNSTE*SARTPP
Trigger: TGGGGGTGTGCGGGCAGATCATTCCGTGGAATTTCC...CAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAACAAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261733.7
ENST00000416293.7
CDS-3UTR TCA 90 bp CAACATCGTTGGAAGGACACCGGTGGGAGGGGCTGTCCTGTTAATTCTTGGAGACACCTAATACTCCTGTaGCTGACCCACATCCGAATA +
Preference number: 4 (lower is better)
Translates to: QHRWKDTGGRGCPVNSWRHLILL*LTHIRI
Trigger: TATTCGGATGTGGGTCAGTCACAGGAGTATTAGGTG...TCTCCAAGAATTAACAGGACAGCCCCTCCCACCGGTGTCCTTCCAACGATGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR GCA 90 bp TTGTTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCATTTCCACGGAATGATCTaGCCGCACACCCCCACAGGT +
Preference number: 4 (lower is better)
Translates to: LLLILLNFPSMAEGGSLHFHGMI*PHTPTG
Trigger: ACCTGTGGGGGTGTGCGGGCAGATCATTCCGTGGAA...ATGCAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261733.7
ENST00000416293.7
CDS-3UTR GCA 90 bp GTTTTGTTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGTGGGCCCAGCTTCCATaGTTGCATCAGGAGCGGGAA +
Preference number: 4 (lower is better)
Translates to: VLLLILLNFPSMAEGGSLWAQLP*LHQERE
Trigger: TTCCCGCTCCTGATGCAAGCATGGAAGCTGGGCCCA...CAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAACAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261733.7
ENST00000416293.7
CDS-3UTR GCA 90 bp TTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCATGATTGGGCCCAGCTTCCATaGTTGCATCAGGAGCGGGAA +
Preference number: 4 (lower is better)
Translates to: LLILLNFPSMAEGGSLHDWAQLP*LHQERE
Trigger: TTCCCGCTCCTGATGCAAGCATGGAAGCTGGGCCCA...ATCATGCAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261733.7
ENST00000416293.7
CDS-3UTR GCA 90 bp CAGCCCGTACGTGGAATTGTTGGCTCTCCCAACAACCTCCTCTATGGTCTTGAAAGTGGAGCCTGTGAATaGCACTTTGTCCACATCCTC +
Preference number: 4 (lower is better)
Translates to: QPVRGIVGSPNNLLYGLESGACE*HFVHIL
Trigger: GAGGATGTGGACAAAGTGGCATTCACAGGCTCCACT...TTCAAGACCATAGAGGAGGTTGTTGGGAGAGCCAACAATTCCACGTACGGGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548536.1
CDS-3UTR GCA 90 bp GTTTTGTTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGGCCCCTGCTCGGTCTTaGTATCAAAGGGGTTCCCGA +
Preference number: 4 (lower is better)
Translates to: VLLLILLNFPSMAEGGSLAPARS*YQRGSR
Trigger: TCGGGAACCCCTTTGATAGCAAGACCGAGCAGGGGC...CAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAACAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261733.7
ENST00000416293.7
ENST00000549106.1
CDS-3UTR GCA 90 bp TTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCATGATTCCACCTGCGGCCCCTaGTCGGTCTTGCTATCAAAG +
Preference number: 4 (lower is better)
Translates to: LLILLNFPSMAEGGSLHDSTCGP*SVLLSK
Trigger: CTTTGATAGCAAGACCGAGCAGGGGCCGCAGGTGGA...ATCATGCAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261733.7
ENST00000416293.7
ENST00000549106.1
CDS-3UTR GCA 90 bp CAATGGCTGAGGGAGGAAGCTTGCATGATTCTTATGAGTTCTTCTGAGGCACTTTCCACCTGCGGCCCCTaGTCGGTCTTGCTATCAAAG +
Preference number: 4 (lower is better)
Translates to: QWLREEACMILMSSSEALSTCGP*SVLLSK
Trigger: CTTTGATAGCAAGACCGAGCAGGGGCCGCAGGTGGA...AAGTGCCTCAGAAGAACTCATAAGAATCATGCAAGCTTCCTCCCTCAGCCATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548536.1
ENST00000549106.1
CDS-3UTR GCA 90 bp TTCCATCAATGGCTGAGGGAGGAAGCTTGCATGATTCTTATGAGTTCTTCTGAGCACGGTCAGCAGCAATaGCCCCACCACACAGCAGCT +
Preference number: 4 (lower is better)
Translates to: FHQWLREEACMILMSSSEHGQQQ*PHHTAA
Trigger: AGCTGCTGTGTGGTGGGGGCATTGCTGCTGACCGTG...CTCAGAAGAACTCATAAGAATCATGCAAGCTTCCTCCCTCAGCCATTGATGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548536.1
ENST00000549106.1
CDS-3UTR GCA 90 bp TTGTTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCATCTTTGTGAAGACAGCTaGGGCCAGCCCGTACGTGGA +
Preference number: 4 (lower is better)
Translates to: LLLILLNFPSMAEGGSLHLCEDS*GQPVRG
Trigger: TCCACGTACGGGCTGGCCGCAGCTGTCTTCACAAAG...ATGCAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261733.7
ENST00000416293.7
CDS-3UTR GCA 90 bp GTTTTGTTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCTTTGTGAAGACAGCTaGGGCCAGCCCGTACGTGGA +
Preference number: 4 (lower is better)
Translates to: VLLLILLNFPSMAEGGSLLCEDS*GQPVRG
Trigger: TCCACGTACGGGCTGGCCGCAGCTGTCTTCACAAAG...CAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAACAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261733.7
ENST00000416293.7
CDS-3UTR GCA 90 bp GTTTTGTTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCCAAGATCACGTCACTaGACTCCAGCCTGGGCGACA +
Preference number: 4 (lower is better)
Translates to: VLLLILLNFPSMAEGGSLPRSRH*TPAWAT
Trigger: TGTCGCCCAGGCTGGAGTGCAGTGACGTGATCTTGG...CAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAACAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR GCA 90 bp TTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCATGATTCTCTGTGCCCTCTGTaGAGCCACAAGTGGAGGCTC +
Preference number: 4 (lower is better)
Translates to: LLILLNFPSMAEGGSLHDSLCPL*SHKWRL
Trigger: GAGCCTCCACTTGTGGCTGCACAGAGGGCACAGAGA...ATCATGCAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR GCA 90 bp CCTGGGCTATGGATTCCTGTTAATCTGTCCCAGCCTTGGGCTACCACACCTGCTCATTTGCAGGGAGCTTaGACATCCAACATCACCTTT +
Preference number: 4 (lower is better)
Translates to: PGLWIPVNLSQPWATTPAHLQGA*TSNITF
Trigger: AAAGGTGATGTTGGATGTGCAAGCTCCCTGCAAATG...AGCAGGTGTGGTAGCCCAAGGCTGGGACAGATTAACAGGAATCCATAGCCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR CCA 90 bp TACACCTGGCTCTGCCTTTTAGATAACAGTAGCAAAATTAGTGAAAGTACTAAACCTCGGGCTGCTGGTTaGGGGCAGGCACGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: YTWLCLLDNSSKISESTKPRAAG*GQARPG
Trigger: CCCAGGCCGTGCCTGCCCCCAACCAGCAGCCCGAGG...TTTAGTACTTTCACTAATTTTGCTACTGTTATCTAAAAGGCAGAGCCAGGTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR CCA 90 bp GTTTTGTTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGTCCAGTTGCCAAGGCTaGGCCCAGCTTCCATGCTTG +
Preference number: 4 (lower is better)
Translates to: VLLLILLNFPSMAEGGSLSSCQG*AQLPCL
Trigger: CAAGCATGGAAGCTGGGCCCAGCCTTGGCAACTGGA...CAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAACAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261733.7
ENST00000416293.7
CDS-3UTR CCA 90 bp TTGTTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCATTCCAGTTGCCAAGGCTaGGCCCAGCTTCCATGCTTG +
Preference number: 4 (lower is better)
Translates to: LLLILLNFPSMAEGGSLHSSCQG*AQLPCL
Trigger: CAAGCATGGAAGCTGGGCCCAGCCTTGGCAACTGGA...ATGCAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261733.7
ENST00000416293.7
CDS-3UTR CCA 90 bp TTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCATGATTTGTCCACATCCTCATaGGAGGCAATGGCGGCCCCA +
Preference number: 4 (lower is better)
Translates to: LLILLNFPSMAEGGSLHDLSTSS*EAMAAP
Trigger: TGGGGCCGCCATTGCCTCCCATGAGGATGTGGACAA...ATCATGCAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261733.7
ENST00000416293.7
CDS-3UTR CCA 90 bp TTGTTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCATAAGAACAGGGCGAAGTaGGCCTGTTCCACGGCCCAA +
Preference number: 4 (lower is better)
Translates to: LLLILLNFPSMAEGGSLHKNRAK*ACSTAQ
Trigger: TTGGGCCGTGGAACAGGCCCACTTCGCCCTGTTCTT...ATGCAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261733.7
ENST00000416293.7
CDS-3UTR CCA 90 bp TTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCATGATAAGAACAGGGCGAAGTaGGCCTGTTCCACGGCCCAA +
Preference number: 4 (lower is better)
Translates to: LLILLNFPSMAEGGSLHDKNRAK*ACSTAQ
Trigger: TTGGGCCGTGGAACAGGCCCACTTCGCCCTGTTCTT...ATCATGCAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261733.7
ENST00000416293.7
CDS-3UTR CCA 90 bp GTGGTGTTTCACATGATGGTAGAGACTGCTGATTGCCCTCTTGAACCCAGCTTCCAGGATCTGCATCACTaGCCCGAAGATCTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: VVFHMMVETADCPLEPSFQDLHH*PEDLLL
Trigger: AAGGAGGAGATCTTCGGGCCAGTGATGCAGATCCTG...GAAGCTGGGTTCAAGAGGGCAATCAGCAGTCTCTACCATCATGTGAAACACCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR CCA 90 bp TTGTTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCATCGGCCAGCCCGTACGTaGAATTGTTGGCTCTCCCAA +
Preference number: 4 (lower is better)
Translates to: LLLILLNFPSMAEGGSLHRPART*NCWLSQ
Trigger: TTGGGAGAGCCAACAATTCCACGTACGGGCTGGCCG...ATGCAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261733.7
ENST00000416293.7
CDS-3UTR CCA 90 bp TTGTTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCATTGTCTATCTCTGCCTTaGCTGCCAGGCAGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: LLLILLNFPSMAEGGSLHCLSLP*LPGREG
Trigger: CCCTTCCCTGCCTGGCAGCCAAGGCAGAGATAGACA...ATGCAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR CCA 90 bp GTTTTGTTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGGATGGGGTCTCACTCTaGGCTGGAGTGAAGTGGTGC +
Preference number: 4 (lower is better)
Translates to: VLLLILLNFPSMAEGGSLDGVSL*AGVKWC
Trigger: GCACCACTTCACTCCAGCCCAGAGTGAGACCCCATC...CAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAACAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR CCA 90 bp CTATGGATTCCTGTTAATCTGTCCCAGCCTTGGGCTACCACACCTGCTTTGCACTCCAAGTACAGTTCCTaGCATGTAGTGGGTGCACAG +
Preference number: 4 (lower is better)
Translates to: LWIPVNLSQPWATTPALHSKYSS*HVVGAQ
Trigger: CTGTGCACCCACTACATGCCAGGAACTGTACTTGGA...GTGCAAAGCAGGTGTGGTAGCCCAAGGCTGGGACAGATTAACAGGAATCCATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR CCA 90 bp CTATGGATTCCTGTTAATCTGTCCCAGCCTTGGGCTACCACACCTGCTTTGCACCCTCACCCTTACTCCTaGCATGGAAGATACAGTAGG +
Preference number: 4 (lower is better)
Translates to: LWIPVNLSQPWATTPALHPHPYS*HGRYSR
Trigger: CCTACTGTATCTTCCATGCCAGGAGTAAGGGTGAGG...GTGCAAAGCAGGTGTGGTAGCCCAAGGCTGGGACAGATTAACAGGAATCCATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR TCA 90 bp TTGTTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCATCTCCAGTGGACGGATTaGCGGTGGGGAATGTTTTCC +
Preference number: 4 (lower is better)
Translates to: LLLILLNFPSMAEGGSLHLQWTD*RWGMFS
Trigger: GGAAAACATTCCCCACCGTCAATCCGTCCACTGGAG...ATGCAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261733.7
ENST00000416293.7
CDS-3UTR TCA 90 bp GTTTTGTTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCAGCTACCTGACAGATaGCCTCTCCAGTGGACGGAT +
Preference number: 4 (lower is better)
Translates to: VLLLILLNFPSMAEGGSLQLPDR*PLQWTD
Trigger: ATCCGTCCACTGGAGAGGTCATCTGTCAGGTAGCTG...CAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAACAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261733.7
ENST00000416293.7
CDS-3UTR TCA 90 bp TTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCATGATTCCCCTTCAGCTACCTaGCAGATGACCTCTCCAGTG +
Preference number: 4 (lower is better)
Translates to: LLILLNFPSMAEGGSLHDSPSAT*QMTSPV
Trigger: CACTGGAGAGGTCATCTGTCAGGTAGCTGAAGGGGA...ATCATGCAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261733.7
ENST00000416293.7
CDS-3UTR TCA 90 bp TACACCTGGCTCTGCCTTTTAGATAACAGTAGCAAAATTAGTGAAAGTACTAAACATGCGGCGCCAAGGTaGGCCCAGCTGGAAGGCGGC +
Preference number: 4 (lower is better)
Translates to: YTWLCLLDNSSKISESTKHAAPR*AQLEGG
Trigger: GCCGCCTTCCAGCTGGGCTCACCTTGGCGCCGCATG...TTTAGTACTTTCACTAATTTTGCTACTGTTATCTAAAAGGCAGAGCCAGGTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR TCA 90 bp TTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCATGATATCCAGGCACAATGTTaGCCACACCAGGGGGAAAGC +
Preference number: 4 (lower is better)
Translates to: LLILLNFPSMAEGGSLHDIQAQC*PHQGES
Trigger: GCTTTCCCCCTGGTGTGGTCAACATTGTGCCTGGAT...ATCATGCAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261733.7
ENST00000416293.7
CDS-3UTR TCA 90 bp TTGTTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCATTGTCCAAATCCTTTGTaGAGACAGCTGCGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: LLLILLNFPSMAEGGSLHCPNPL*RQLRPA
Trigger: GGCTGGCCGCAGCTGTCTTCACAAAGGATTTGGACA...ATGCAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261733.7
ENST00000416293.7
CDS-3UTR TCA 90 bp GTTTTGTTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGACACATCATAGCAGTTaGCCCACACAGTGCCCGCCT +
Preference number: 4 (lower is better)
Translates to: VLLLILLNFPSMAEGGSLTHHSS*PTQCPP
Trigger: AGGCGGGCACTGTGTGGGTCAACTGCTATGATGTGT...CAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAACAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261733.7
ENST00000416293.7
CDS-3UTR TCA 90 bp TTGTTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCATACACATCATAGCAGTTaGCCCACACAGTGCCCGCCT +
Preference number: 4 (lower is better)
Translates to: LLLILLNFPSMAEGGSLHTHHSS*PTQCPP
Trigger: AGGCGGGCACTGTGTGGGTCAACTGCTATGATGTGT...ATGCAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261733.7
ENST00000416293.7
CDS-3UTR TCA 90 bp TTGTTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCATGTAGCCACCAAAGGGTaGCTGGGCTCCAAACACATC +
Preference number: 4 (lower is better)
Translates to: LLLILLNFPSMAEGGSLHVATKG*LGSKHI
Trigger: GATGTGTTTGGAGCCCAGTCACCCTTTGGTGGCTAC...ATGCAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261733.7
ENST00000416293.7
ENST00000549106.1
CDS-3UTR TCA 90 bp GTTTTGTTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGGTAGCCACCAAAGGGTaGCTGGGCTCCAAACACATC +
Preference number: 4 (lower is better)
Translates to: VLLLILLNFPSMAEGGSLVATKG*LGSKHI
Trigger: GATGTGTTTGGAGCCCAGTCACCCTTTGGTGGCTAC...CAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAACAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261733.7
ENST00000416293.7
ENST00000549106.1
CDS-3UTR TCA 90 bp AGCTACCTTCATCACAACCACGTTTCCAGTTGCCAAGGCTGGGCCCAGCTTCCATCTTATGAGTTCTTCTaGGGCACTTTGACTGTGACA +
Preference number: 4 (lower is better)
Translates to: SYLHHNHVSSCQGWAQLPSYEFF*GTLTVT
Trigger: TGTCACAGTCAAAGTGCCTCAGAAGAACTCATAAGA...TGGAAGCTGGGCCCAGCCTTGGCAACTGGAAACGTGGTTGTGATGAAGGTAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548536.1
CDS-3UTR TCA 90 bp CTATGGATTCCTGTTAATCTGTCCCAGCCTTGGGCTACCACACCTGCTTTGCACTTGAGTCCAGGAGTTTaGAAACAGCCTGGGCAACAT +
Preference number: 4 (lower is better)
Translates to: LWIPVNLSQPWATTPALHLSPGV*KQPGQH
Trigger: ATGTTGCCCAGGCTGTTTTCAAACTCCTGGACTCAA...GTGCAAAGCAGGTGTGGTAGCCCAAGGCTGGGACAGATTAACAGGAATCCATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR TCA 90 bp TTGTTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCATAGGCAGAGGTTGCAGTaGGCCAAGATCACGTCACTG +
Preference number: 4 (lower is better)
Translates to: LLLILLNFPSMAEGGSLHRQRLQ*AKITSL
Trigger: CAGTGACGTGATCTTGGCTCACTGCAACCTCTGCCT...ATGCAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR TCA 90 bp CCTGGGCTATGGATTCCTGTTAATCTGTCCCAGCCTTGGGCTACCACACCTGCTCTCTCACAGTTACAGTaGGTACAGCAGGAAAGAAAT +
Preference number: 4 (lower is better)
Translates to: PGLWIPVNLSQPWATTPALSQLQ*VQQERN
Trigger: ATTTCTTTCCTGCTGTACTCACTGTAACTGTGAGAG...AGCAGGTGTGGTAGCCCAAGGCTGGGACAGATTAACAGGAATCCATAGCCCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR TCA 90 bp GTCCAAATCCTTTGTGAAGACAGCTGCGGCCAGCCCGTACGTGGAATTGTTGGCTTTCCAGAAGCACAGTaGTGTCTGGAGTTGACATTT +
Preference number: 4 (lower is better)
Translates to: VQILCEDSCGQPVRGIVGFPEAQ*CLELTF
Trigger: AAATGTCAACTCCAGACATCACTGTGCTTCTGGAAA...GCCAACAATTCCACGTACGGGCTGGCCGCAGCTGTCTTCACAAAGGATTTGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548536.1
CDS-3UTR GCA 90 bp TCCGAATACCCAGGGAGATTAGGTGGTTCATCACCTGAGAGCTTTGTTTTTACTTTCCACGGAATGATCTaGCCGCACACCCCCACAGGT +
Preference number: 4 (lower is better)
Translates to: SEYPGRLGGSSPESFVFTFHGMI*PHTPTG
Trigger: ACCTGTGGGGGTGTGCGGGCAGATCATTCCGTGGAA...AGTAAAAACAAAGCTCTCAGGTGATGAACCACCTAATCTCCCTGGGTATTCGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR GCA 90 bp GTTTTGTTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGAACCACGTTTCCAGTTaGCAAGGCTGGGCCCAGCTT +
Preference number: 4 (lower is better)
Translates to: VLLLILLNFPSMAEGGSLNHVSS*QGWAQL
Trigger: AAGCTGGGCCCAGCCTTGGCAACTGGAAACGTGGTT...CAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAACAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261733.7
ENST00000416293.7
CDS-3UTR GCA 90 bp GTTTTGTTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGGCGGTGAGGGGTGTCTaGTCAGCTACCTTCATCACA +
Preference number: 4 (lower is better)
Translates to: VLLLILLNFPSMAEGGSLAVRGV*SATFIT
Trigger: TGTGATGAAGGTAGCTGAGCAGACACCCCTCACCGC...CAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAACAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261733.7
ENST00000416293.7
CDS-3UTR GCA 90 bp TTCCATCAATGGCTGAGGGAGGAAGCTTGCATGATTCTTATGAGTTCTTCTGAGGCCCCTGCTCGGTCTTaGTATCAAAGGGGTTCCCGA +
Preference number: 4 (lower is better)
Translates to: FHQWLREEACMILMSSSEAPARS*YQRGSR
Trigger: TCGGGAACCCCTTTGATAGCAAGACCGAGCAGGGGC...CTCAGAAGAACTCATAAGAATCATGCAAGCTTCCTCCCTCAGCCATTGATGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000548536.1
ENST00000549106.1
CDS-3UTR GCA 90 bp CAGCTCTGTTTTATCCTTCACAGAATAAGCCAAATGAGAGTTGGAAGTGACTGCCACGGTCAGCAGCAATaGCCCCACCACACAGCAGCT +
Preference number: 4 (lower is better)
Translates to: QLCFILHRISQMRVGSDCHGQQQ*PHHTAA
Trigger: AGCTGCTGTGTGGTGGGGGCATTGCTGCTGACCGTG...GCAGTCACTTCCAACTCTCATTTGGCTTATTCTGTGAAGGATAAAACAGAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR GCA 90 bp CTATGGATTCCTGTTAATCTGTCCCAGCCTTGGGCTACCACACCTGCTTTGCACTTGAACTTCAGGATCTaGATCACTGGCCCGAAGATC +
Preference number: 4 (lower is better)
Translates to: LWIPVNLSQPWATTPALHLNFRI*ITGPKI
Trigger: GATCTTCGGGCCAGTGATGCAGATCCTGAAGTTCAA...GTGCAAAGCAGGTGTGGTAGCCCAAGGCTGGGACAGATTAACAGGAATCCATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR GCA 90 bp TTGTTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCATACTTCAGTGTATGCCTaGAGCCCGTACTCGCCCAAC +
Preference number: 4 (lower is better)
Translates to: LLLILLNFPSMAEGGSLHTSVYA*SPYSPN
Trigger: GTTGGGCGAGTACGGGCTGCAGGCATACACTGAAGT...ATGCAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261733.7
ENST00000416293.7
ENST00000549106.1
CDS-3UTR GCA 90 bp TTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCATGATACTTCAGTGTATGCCTaGAGCCCGTACTCGCCCAAC +
Preference number: 4 (lower is better)
Translates to: LLILLNFPSMAEGGSLHDTSVYA*SPYSPN
Trigger: GTTGGGCGAGTACGGGCTGCAGGCATACACTGAAGT...ATCATGCAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261733.7
ENST00000416293.7
ENST00000549106.1
CDS-3UTR GCA 90 bp GTGGTGCTGTGCTTCAGTGGTCACGCTCCTAGTCTGCCTTCATGTTCCATCCTGCTGAGGGAGGAAGCTTaGATGATTCTTATGAGTTCT +
Preference number: 4 (lower is better)
Translates to: VVLCFSGHAPSLPSCSILLREEA*MILMSS
Trigger: AGAACTCATAAGAATCATGCAAGCTTCCTCCCTCAG...CAGGATGGAACATGAAGGCAGACTAGGAGCGTGACCACTGAAGCACAGCACCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR CCA 90 bp TTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCATGATGGGATGGTTTTCCCGTaGTACTTATCAGCCCAGCCG +
Preference number: 4 (lower is better)
Translates to: LLILLNFPSMAEGGSLHDGMVFP*YLSAQP
Trigger: CGGCTGGGCTGATAAGTACCACGGGAAAACCATCCC...ATCATGCAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261733.7
ENST00000416293.7
CDS-3UTR CCA 90 bp TCCGAATACCCAGGGAGATTAGGTGGTTCATCACCTGAGAGCTTTGTTTTTACTTTGTCCACATCCTCATaGGAGGCAATGGCGGCCCCA +
Preference number: 4 (lower is better)
Translates to: SEYPGRLGGSSPESFVFTLSTSS*EAMAAP
Trigger: TGGGGCCGCCATTGCCTCCCATGAGGATGTGGACAA...AGTAAAAACAAAGCTCTCAGGTGATGAACCACCTAATCTCCCTGGGTATTCGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR CCA 90 bp GTTTTGTTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCTCCCAGCAGCAACCTaGATTACGCGGCCAATCTCA +
Preference number: 4 (lower is better)
Translates to: VLLLILLNFPSMAEGGSLLPAAT*ITRPIS
Trigger: TGAGATTGGCCGCGTAATCCAGGTTGCTGCTGGGAG...CAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAACAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261733.7
ENST00000416293.7
CDS-3UTR CCA 90 bp CTATGGATTCCTGTTAATCTGTCCCAGCCTTGGGCTACCACACCTGCTTTGCACAGGAAGATAGTGTTCTaGGTGGGAGACTCAAGAGGT +
Preference number: 4 (lower is better)
Translates to: LWIPVNLSQPWATTPALHRKIVF*VGDSRG
Trigger: ACCTCTTGAGTCTCCCACCCAGAACACTATCTTCCT...GTGCAAAGCAGGTGTGGTAGCCCAAGGCTGGGACAGATTAACAGGAATCCATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR CCA 90 bp CCTGGGCTATGGATTCCTGTTAATCTGTCCCAGCCTTGGGCTACCACACCTGCTTTCTCCTTTTGTGTCTaGCTTCTTTCACTCAGCATC +
Preference number: 4 (lower is better)
Translates to: PGLWIPVNLSQPWATTPAFSFCV*LLSLSI
Trigger: GATGCTGAGTGAAAGAAGCCAGACACAAAAGGAGAA...AGCAGGTGTGGTAGCCCAAGGCTGGGACAGATTAACAGGAATCCATAGCCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR CCA 90 bp TTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCATGATCTGATCTCGAACTCCTaGCCTCAGGTAATCCACCCG +
Preference number: 4 (lower is better)
Translates to: LLILLNFPSMAEGGSLHDLISNS*PQVIHP
Trigger: CGGGTGGATTACCTGAGGCCAGGAGTTCGAGATCAG...ATCATGCAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR CCA 90 bp CAACATCGTTGGAAGGACACCGGTGGGAGGGGCTGTCCTGTTAATTCTTGGAGAACAGTTAATACTTCTTaGGGCCACAGGATTGGGCAT +
Preference number: 4 (lower is better)
Translates to: QHRWKDTGGRGCPVNSWRTVNTS*GHRIGH
Trigger: ATGCCCAATCCTGTGGCCCCAAGAAGTATTAACTGT...TCTCCAAGAATTAACAGGACAGCCCCTCCCACCGGTGTCCTTCCAACGATGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR CAA 72 bp TCCCTCATTACACTGCCTGCCAAATGTACAGCCAAATaGTATGCAACATCGTTGGAAGGACACCGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: SLITLPAKCTAK*YATSLEGHRWE
Trigger: CTCCCACCGGTGTCCTTCCAACGATGTTGCATACAATTTGGCTGTACATTTGGCAGGCAGTGTAATGAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR TCA 90 bp TTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCATGATCCACCAGGTAGGAGATaGCATAGGGCTTGCCATTGT +
Preference number: 4 (lower is better)
Translates to: LLILLNFPSMAEGGSLHDPPGRR*HRACHC
Trigger: ACAATGGCAAGCCCTATGTCATCTCCTACCTGGTGG...ATCATGCAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261733.7
ENST00000416293.7
CDS-3UTR TCA 90 bp GTTTTGTTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCATGGCGTGTGTAGCTaGAGAAGTCTCCGTCAATGG +
Preference number: 4 (lower is better)
Translates to: VLLLILLNFPSMAEGGSLHGVCS*RSLRQW
Trigger: CCATTGACGGAGACTTCTTCAGCTACACACGCCATG...CAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAACAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261733.7
ENST00000416293.7
CDS-3UTR TCA 90 bp CTCTGTTTTATCCTTCACAGAATAAGCCAAATGAGAGTTGGAAGTGACTGCAGACCACATAGAGGGCGGTaGGGGGTGTCTGCTCAGCTA +
Preference number: 4 (lower is better)
Translates to: LCFILHRISQMRVGSDCRPHRGR*GVSAQL
Trigger: TAGCTGAGCAGACACCCCTCACCGCCCTCTATGTGG...TCTGCAGTCACTTCCAACTCTCATTTGGCTTATTCTGTGAAGGATAAAACAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR TCA 90 bp TTGTTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCATGAAAGCCAGCCTCCTTaGTCAGGTTGGCCACATAGA +
Preference number: 4 (lower is better)
Translates to: LLLILLNFPSMAEGGSLHESQPP*SGWPHR
Trigger: TCTATGTGGCCAACCTGATCAAGGAGGCTGGCTTTC...ATGCAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261733.7
ENST00000416293.7
CDS-3UTR TCA 90 bp TTGTTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCATCTTGCTTCCCCGTGTTaGTGTAGCCGAGGATCTTCT +
Preference number: 4 (lower is better)
Translates to: LLLILLNFPSMAEGGSLHLASPC*CSRGSS
Trigger: AGAAGATCCTCGGCTACATCAACACGGGGAAGCAAG...ATGCAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261733.7
ENST00000416293.7
ENST00000549106.1
CDS-3UTR TCA 90 bp TTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCATGATCTTGCTTCCCCGTGTTaGTGTAGCCGAGGATCTTCT +
Preference number: 4 (lower is better)
Translates to: LLILLNFPSMAEGGSLHDLASPC*CSRGSS
Trigger: AGAAGATCCTCGGCTACATCAACACGGGGAAGCAAG...ATCATGCAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261733.7
ENST00000416293.7
ENST00000549106.1
CDS-3UTR TCA 90 bp CAGCTCTGTTTTATCCTTCACAGAATAAGCCAAATGAGAGTTGGAAGTGACTGCCTGAGATTACAGGCATaGGCCATGGCACCACCTGGC +
Preference number: 4 (lower is better)
Translates to: QLCFILHRISQMRVGSDCLRLQA*AMAPPG
Trigger: GCCAGGTGGTGCCATGGCTCATGCCTGTAATCTCAG...GCAGTCACTTCCAACTCTCATTTGGCTTATTCTGTGAAGGATAAAACAGAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR TCA 90 bp TTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCATGATATCCATGGGACCTTGTaGAAGCCCATTTGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: LLILLNFPSMAEGGSLHDIHGTL*KPICRE
Trigger: CTCCCTGCAAATGGGCTTTCACAAGGTCCCATGGAT...ATCATGCAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR GCA 90 bp TTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCATGATCCCAGCTTCCATGCTTaGATCAGGAGCGGGAAATTC +
Preference number: 4 (lower is better)
Translates to: LLILLNFPSMAEGGSLHDPSFHA*IRSGKF
Trigger: GAATTTCCCGCTCCTGATGCAAGCATGGAAGCTGGG...ATCATGCAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261733.7
ENST00000416293.7
CDS-3UTR GCA 90 bp GTGGTGTTTCACATGATGGTAGAGACTGCTGATTGCCCTCTTGAACCCAGCTTCATGGTCATGCCATCCTaGACATCTCCAAACACAGTG +
Preference number: 4 (lower is better)
Translates to: VVFHMMVETADCPLEPSFMVMPS*TSPNTV
Trigger: CACTGTGTTTGGAGATGTGCAGGATGGCATGACCAT...GAAGCTGGGTTCAAGAGGGCAATCAGCAGTCTCTACCATCATGTGAAACACCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR GCA 90 bp TTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCATGATCCTTGGCGATGGTCATaGCATCCTGCACATCTCCAA +
Preference number: 4 (lower is better)
Translates to: LLILLNFPSMAEGGSLHDPWRWS*HPAHLQ
Trigger: TTGGAGATGTGCAGGATGGCATGACCATCGCCAAGG...ATCATGCAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261733.7
ENST00000416293.7
ENST00000549106.1
CDS-3UTR GCA 90 bp CAATGGCTGAGGGAGGAAGCTTGCATGATTCTTATGAGTTCTTCTGAGGCACTTCCTTGGCGATGGTCATaGCATCCTGCACATCTCCAA +
Preference number: 4 (lower is better)
Translates to: QWLREEACMILMSSSEALPWRWS*HPAHLQ
Trigger: TTGGAGATGTGCAGGATGGCATGACCATCGCCAAGG...AAGTGCCTCAGAAGAACTCATAAGAATCATGCAAGCTTCCTCCCTCAGCCATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548536.1
ENST00000549106.1
CDS-3UTR GCA 90 bp TTGTTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCATTTTCACTTCAGTGTATaGCTGCAGCCCGTACTCGCC +
Preference number: 4 (lower is better)
Translates to: LLLILLNFPSMAEGGSLHFHFSV*LQPVLA
Trigger: GGCGAGTACGGGCTGCAGGCATACACTGAAGTGAAA...ATGCAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261733.7
ENST00000416293.7
ENST00000549106.1
CDS-3UTR GCA 90 bp ACAGATGACCTCTCCAGTGGACGGATTGACGGTGGGGAATGTTTTCCTGCTGACCTGAGGGAGGAAGCTTaGATGATTCTTATGAGTTCT +
Preference number: 4 (lower is better)
Translates to: TDDLSSGRIDGGECFPADLREEA*MILMSS
Trigger: AGAACTCATAAGAATCATGCAAGCTTCCTCCCTCAG...GTCAGCAGGAAAACATTCCCCACCGTCAATCCGTCCACTGGAGAGGTCATCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548536.1
CDS-3UTR GCA 90 bp TTGTTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCATAGGCGTGAGCCACCATaGCCACCTTCCTTTGGTTAT +
Preference number: 4 (lower is better)
Translates to: LLLILLNFPSMAEGGSLHRREPP*PPSFGY
Trigger: ATAACCAAAGGAAGGTGGGCATGGTGGCTCACGCCT...ATGCAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR GCA 90 bp CCTGGGCTATGGATTCCTGTTAATCTGTCCCAGCCTTGGGCTACCACACCTGCTGCCAGCCACCATGACTaGCTAATTTGTGTATTTTTA +
Preference number: 4 (lower is better)
Translates to: PGLWIPVNLSQPWATTPAASHHD*LICVFL
Trigger: TAAAAATACACAAATTAGGCAGTCATGGTGGCTGGC...AGCAGGTGTGGTAGCCCAAGGCTGGGACAGATTAACAGGAATCCATAGCCCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR GCA 90 bp CAGCTCTGTTTTATCCTTCACAGAATAAGCCAAATGAGAGTTGGAAGTGACTGCTCACCCAGGATAGAGTaGAGTGGCGCGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: QLCFILHRISQMRVGSDCSPRIE*SGAISA
Trigger: AGCCGAGATCGCGCCACTGCACTCTATCCTGGGTGA...GCAGTCACTTCCAACTCTCATTTGGCTTATTCTGTGAAGGATAAAACAGAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR CCA 90 bp TCCGAATACCCAGGGAGATTAGGTGGTTCATCACCTGAGAGCTTTGTTTTTACTCTCCCAGCAGCAACCTaGATTACGCGGCCAATCTCA +
Preference number: 4 (lower is better)
Translates to: SEYPGRLGGSSPESFVFTLPAAT*ITRPIS
Trigger: TGAGATTGGCCGCGTAATCCAGGTTGCTGCTGGGAG...AGTAAAAACAAAGCTCTCAGGTGATGAACCACCTAATCTCCCTGGGTATTCGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR CCA 90 bp TTGTTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCATTCTCCTCCTTGGCGATaGTCATGCCATCCTGCACAT +
Preference number: 4 (lower is better)
Translates to: LLLILLNFPSMAEGGSLHSPPWR*SCHPAH
Trigger: ATGTGCAGGATGGCATGACCATCGCCAAGGAGGAGA...ATGCAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261733.7
ENST00000416293.7
CDS-3UTR CCA 90 bp GTTTTGTTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCAGGATCTGCATCACTaGCCCGAAGATCTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: VLLLILLNFPSMAEGGSLQDLHH*PEDLLL
Trigger: AAGGAGGAGATCTTCGGGCCAGTGATGCAGATCCTG...CAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAACAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261733.7
ENST00000416293.7
CDS-3UTR CCA 90 bp GTGGTGTTTCACATGATGGTAGAGACTGCTGATTGCCCTCTTGAACCCAGCTTCCCTGGGACAGGTAATTaGCCTTGTCCAAATCCTTTG +
Preference number: 4 (lower is better)
Translates to: VVFHMMVETADCPLEPSFPGTGN*PCPNPL
Trigger: CAAAGGATTTGGACAAGGCCAATTACCTGTCCCAGG...GAAGCTGGGTTCAAGAGGGCAATCAGCAGTCTCTACCATCATGTGAAACACCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR CCA 90 bp CAACATCGTTGGAAGGACACCGGTGGGAGGGGCTGTCCTGTTAATTCTTGGAGAATGCCCACCTTCCTTTaGTTATTGAGATGGACAAAG +
Preference number: 4 (lower is better)
Translates to: QHRWKDTGGRGCPVNSWRMPTFL*LLRWTK
Trigger: CTTTGTCCATCTCAATAACCAAAGGAAGGTGGGCAT...TCTCCAAGAATTAACAGGACAGCCCCTCCCACCGGTGTCCTTCCAACGATGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR CCA 90 bp GTGGTGCTGTGCTTCAGTGGTCACGCTCCTAGTCTGCCTTCATGTTCCATCCTGATGAGCCACAGTGCCTaGCCTAAAATACTCTTAAAT +
Preference number: 4 (lower is better)
Translates to: VVLCFSGHAPSLPSCSILMSHSA*PKILLN
Trigger: ATTTAAGAGTATTTTAGGCCAGGCACTGTGGCTCAT...CAGGATGGAACATGAAGGCAGACTAGGAGCGTGACCACTGAAGCACAGCACCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR CCA 90 bp TTGTTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCATGGTCTCACTCTGGGCTaGAGTGAAGTGGTGCAATCA +
Preference number: 4 (lower is better)
Translates to: LLLILLNFPSMAEGGSLHGLTLG*SEVVQS
Trigger: TGATTGCACCACTTCACTCCAGCCCAGAGTGAGACC...ATGCAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR CCA 90 bp TTGTTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCATTGTATGCAACATCGTTaGAAGGACACCGGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: LLLILLNFPSMAEGGSLHCMQHR*KDTGGR
Trigger: CCTCCCACCGGTGTCCTTCCAACGATGTTGCATACA...ATGCAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR TCA 90 bp TTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCATGATGGAATGTTTTCCTGCTaGCGGCATCGTGCCATTCAT +
Preference number: 4 (lower is better)
Translates to: LLILLNFPSMAEGGSLHDGMFSC*RHRAIH
Trigger: ATGAATGGCACGATGCCGTCAGCAGGAAAACATTCC...ATCATGCAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261733.7
ENST00000416293.7
CDS-3UTR TCA 90 bp CAACATCGTTGGAAGGACACCGGTGGGAGGGGCTGTCCTGTTAATTCTTGGAGAAGTACTAAAAGTCTCTaGTACGCAGAAATAATGGCG +
Preference number: 4 (lower is better)
Translates to: QHRWKDTGGRGCPVNSWRSTKSL*YAEIMA
Trigger: CGCCATTATTTCTGCGTATCAGAGACTTTTAGTACT...TCTCCAAGAATTAACAGGACAGCCCCTCCCACCGGTGTCCTTCCAACGATGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR TCA 90 bp CAGCTCTGTTTTATCCTTCACAGAATAAGCCAAATGAGAGTTGGAAGTGACTGCGAAGCTTCTCCGGGCTaGAGGAAAAGCTCTCTGTGC +
Preference number: 4 (lower is better)
Translates to: QLCFILHRISQMRVGSDCEASPG*RKSSLC
Trigger: GCACAGAGAGCTTTTCCTTCAGCCCGGAGAAGCTTC...GCAGTCACTTCCAACTCTCATTTGGCTTATTCTGTGAAGGATAAAACAGAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR TCA 90 bp TCCGAATACCCAGGGAGATTAGGTGGTTCATCACCTGAGAGCTTTGTTTTTACTCTAGTCTCGAACTCTTaGCCTCATGTGATCCGCCCA +
Preference number: 4 (lower is better)
Translates to: SEYPGRLGGSSPESFVFTLVSNS*PHVIRP
Trigger: TGGGCGGATCACATGAGGTCAAGAGTTCGAGACTAG...AGTAAAAACAAAGCTCTCAGGTGATGAACCACCTAATCTCCCTGGGTATTCGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR TCA 90 bp TTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCATGATAAGCAAGGAGCCCCCTaGCCCCTTCTTCCAAATATA +
Preference number: 4 (lower is better)
Translates to: LLILLNFPSMAEGGSLHDKQGAP*PLLPNI
Trigger: TATATTTGGAAGAAGGGGTCAGGGGGCTCCTTGCTT...ATCATGCAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR GCA 90 bp TTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCATGATAGTGGAGCCTGTGAATaGCACTTTGTCCACATCCTC +
Preference number: 4 (lower is better)
Translates to: LLILLNFPSMAEGGSLHDSGACE*HFVHIL
Trigger: GAGGATGTGGACAAAGTGGCATTCACAGGCTCCACT...ATCATGCAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261733.7
ENST00000416293.7
CDS-3UTR GCA 90 bp CTCTGTTTTATCCTTCACAGAATAAGCCAAATGAGAGTTGGAAGTGACTGCAGATCCACCTGCGGCCCCTaGTCGGTCTTGCTATCAAAG +
Preference number: 4 (lower is better)
Translates to: LCFILHRISQMRVGSDCRSTCGP*SVLLSK
Trigger: CTTTGATAGCAAGACCGAGCAGGGGCCGCAGGTGGA...TCTGCAGTCACTTCCAACTCTCATTTGGCTTATTCTGTGAAGGATAAAACAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR GCA 90 bp GTTTTGTTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGTTCAACCAATTCTCCTaGCTCAGCCTCCTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: VLLLILLNFPSMAEGGSLFNQFS*LSLLSS
Trigger: GCTACTCAGGAGGCTGAGGCAGGAGAATTGGTTGAA...CAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAACAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR GCA 90 bp TTGTTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCATGTAACCCCTTCTATGTaGCAAGGCAGGAGGATCACT +
Preference number: 4 (lower is better)
Translates to: LLLILLNFPSMAEGGSLHVTPSM*QGRRIT
Trigger: AGTGATCCTCCTGCCTTGGCACATAGAAGGGGTTAC...ATGCAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR CCA 90 bp CAGCTCTGTTTTATCCTTCACAGAATAAGCCAAATGAGAGTTGGAAGTGACTGCGGGATGGTTTTCCCGTaGTACTTATCAGCCCAGCCG +
Preference number: 4 (lower is better)
Translates to: QLCFILHRISQMRVGSDCGMVFP*YLSAQP
Trigger: CGGCTGGGCTGATAAGTACCACGGGAAAACCATCCC...GCAGTCACTTCCAACTCTCATTTGGCTTATTCTGTGAAGGATAAAACAGAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR CCA 90 bp TTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCATGATAGAAGTCTCCGTCAATaGGGATGGTTTTCCCGTGGT +
Preference number: 4 (lower is better)
Translates to: LLILLNFPSMAEGGSLHDRSLRQ*GWFSRG
Trigger: ACCACGGGAAAACCATCCCCATTGACGGAGACTTCT...ATCATGCAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261733.7
ENST00000416293.7
CDS-3UTR CCA 90 bp TTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCATGATCGTACGTGGAATTGTTaGCTCTCCCAACAACCTCCT +
Preference number: 4 (lower is better)
Translates to: LLILLNFPSMAEGGSLHDRTWNC*LSQQPP
Trigger: AGGAGGTTGTTGGGAGAGCCAACAATTCCACGTACG...ATCATGCAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261733.7
ENST00000416293.7
CDS-3UTR CCA 90 bp TACACCTGGCTCTGCCTTTTAGATAACAGTAGCAAAATTAGTGAAAGTACTAAAGCTGGTCCCTACAGTTaGCCGGGCACGGTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: YTWLCLLDNSSKISESTKAGPYS*PGTVAH
Trigger: GTGAGCCACCGTGCCCGGCCAACTGTAGGGACCAGC...TTTAGTACTTTCACTAATTTTGCTACTGTTATCTAAAAGGCAGAGCCAGGTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR CCA 90 bp CCTGGGCTATGGATTCCTGTTAATCTGTCCCAGCCTTGGGCTACCACACCTGCTTGTCCTGTTAATTCTTaGAGAAATAGCGTCGTAGTT +
Preference number: 4 (lower is better)
Translates to: PGLWIPVNLSQPWATTPACPVNS*RNSVVV
Trigger: AACTACGACGCTATTTCTCCAAGAATTAACAGGACA...AGCAGGTGTGGTAGCCCAAGGCTGGGACAGATTAACAGGAATCCATAGCCCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR CCA 90 bp CTCTGTTTTATCCTTCACAGAATAAGCCAAATGAGAGTTGGAAGTGACTGCAGAAGCCTCCCAAGTAGCTaGGCACATGCTACCAAGCCC +
Preference number: 4 (lower is better)
Translates to: LCFILHRISQMRVGSDCRSLPSS*AHATKP
Trigger: GGGCTTGGTAGCATGTGCCCAGCTACTTGGGAGGCT...TCTGCAGTCACTTCCAACTCTCATTTGGCTTATTCTGTGAAGGATAAAACAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR CCA 90 bp CTATGGATTCCTGTTAATCTGTCCCAGCCTTGGGCTACCACACCTGCTTTGCACGAGATTGTGAGGAAATaGAAGCTCAGAAGTTGTGTG +
Preference number: 4 (lower is better)
Translates to: LWIPVNLSQPWATTPALHEIVRK*KLRSCV
Trigger: CACACAACTTCTGAGCTTCCATTTCCTCACAATCTC...GTGCAAAGCAGGTGTGGTAGCCCAAGGCTGGGACAGATTAACAGGAATCCATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR CCA 90 bp TTGTTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCATCGCATCCCTGGGCTATaGATTCCTGTTAATCTGTCC +
Preference number: 4 (lower is better)
Translates to: LLLILLNFPSMAEGGSLHRIPGL*IPVNLS
Trigger: GGACAGATTAACAGGAATCCATAGCCCAGGGATGCG...ATGCAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR CCA 90 bp ATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCATGATTCTTATGTTGACCCTCCTCCTTaGCGATGGTCATGCCATCCT +
Preference number: 4 (lower is better)
Translates to: ILLNFPSMAEGGSLHDSYVDPPP*RWSCHP
Trigger: AGGATGGCATGACCATCGCCAAGGAGGAGGGTCAAC...ATAAGAATCATGCAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549106.1
CDS-3UTR TCA 90 bp CTCTGTTTTATCCTTCACAGAATAAGCCAAATGAGAGTTGGAAGTGACTGCAGATCCCCTTCAGCTACCTaGCAGATGACCTCTCCAGTG +
Preference number: 4 (lower is better)
Translates to: LCFILHRISQMRVGSDCRSPSAT*QMTSPV
Trigger: CACTGGAGAGGTCATCTGTCAGGTAGCTGAAGGGGA...TCTGCAGTCACTTCCAACTCTCATTTGGCTTATTCTGTGAAGGATAAAACAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR TCA 90 bp GTTTTGTTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGATCCATATCGGCATCTaGCATGATGATGTTGGGGCT +
Preference number: 4 (lower is better)
Translates to: VLLLILLNFPSMAEGGSLIHIGI*HDDVGA
Trigger: AGCCCCAACATCATCATGTCAGATGCCGATATGGAT...CAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAACAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261733.7
ENST00000416293.7
CDS-3UTR TCA 90 bp GTTTTGTTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGAGGATCTTCTTAAACTaGGTTTCATCCACCTGCGGC +
Preference number: 4 (lower is better)
Translates to: VLLLILLNFPSMAEGGSLRIFLN*VSSTCG
Trigger: GCCGCAGGTGGATGAAACTCAGTTTAAGAAGATCCT...CAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAACAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261733.7
ENST00000416293.7
ENST00000549106.1
CDS-3UTR TCA 90 bp CTCTGTTTTATCCTTCACAGAATAAGCCAAATGAGAGTTGGAAGTGACTGCAGATGGAGTGCAGTGGCATaGTCTCCACTCACTGCAACC +
Preference number: 4 (lower is better)
Translates to: LCFILHRISQMRVGSDCRWSAVA*SPLTAT
Trigger: GGTTGCAGTGAGTGGAGATCATGCCACTGCACTCCA...TCTGCAGTCACTTCCAACTCTCATTTGGCTTATTCTGTGAAGGATAAAACAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR TCA 90 bp CAGCCCGTACGTGGAATTGTTGGCTCTCCCAACAACCTCCTCTATGGTCTTGAAAGTGATGTCTGGAGTTaGCATTTTCAATCTAGACTG +
Preference number: 4 (lower is better)
Translates to: QPVRGIVGSPNNLLYGLESDVWS*HFQSRL
Trigger: CAGTCTAGATTGAAAATGTCAACTCCAGACATCACT...TTCAAGACCATAGAGGAGGTTGTTGGGAGAGCCAACAATTCCACGTACGGGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548536.1
CDS-3UTR GCA 90 bp AAAATTAACACTGAGTTACAAACTGAAGTGGCATTGTTGAAATCCACGGCTCTATGTGTGATGCGTCCATaGGGCGCCAAGGTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: KINTELQTEVALLKSTALCVMRP*GAKVSP
Trigger: TGGGCTCACCTTGGCGCCGCATGGACGCATCACACA...TAGAGCCGTGGATTTCAACAATGCCACTTCAGTTTGTAACTCAGTGTTAATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR GCA 90 bp CAGCTCTGTTTTATCCTTCACAGAATAAGCCAAATGAGAGTTGGAAGTGACTGCCCCAGCTTCCATGCTTaGATCAGGAGCGGGAAATTC +
Preference number: 4 (lower is better)
Translates to: QLCFILHRISQMRVGSDCPSFHA*IRSGKF
Trigger: GAATTTCCCGCTCCTGATGCAAGCATGGAAGCTGGG...GCAGTCACTTCCAACTCTCATTTGGCTTATTCTGTGAAGGATAAAACAGAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR GCA 90 bp TTGTTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCATATGGTCATGCCATCCTaGACATCTCCAAACACAGTG +
Preference number: 4 (lower is better)
Translates to: LLLILLNFPSMAEGGSLHMVMPS*TSPNTV
Trigger: CACTGTGTTTGGAGATGTGCAGGATGGCATGACCAT...ATGCAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261733.7
ENST00000416293.7
ENST00000549106.1
CDS-3UTR GCA 90 bp TTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCATGATTTGAACTTCAGGATCTaGATCACTGGCCCGAAGATC +
Preference number: 4 (lower is better)
Translates to: LLILLNFPSMAEGGSLHDLNFRI*ITGPKI
Trigger: GATCTTCGGGCCAGTGATGCAGATCCTGAAGTTCAA...ATCATGCAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261733.7
ENST00000416293.7
CDS-3UTR GCA 90 bp CTCTGTTTTATCCTTCACAGAATAAGCCAAATGAGAGTTGGAAGTGACTGCAGAACTTCAGTGTATGCCTaGAGCCCGTACTCGCCCAAC +
Preference number: 4 (lower is better)
Translates to: LCFILHRISQMRVGSDCRTSVYA*SPYSPN
Trigger: GTTGGGCGAGTACGGGCTGCAGGCATACACTGAAGT...TCTGCAGTCACTTCCAACTCTCATTTGGCTTATTCTGTGAAGGATAAAACAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR GCA 90 bp TTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCATGATTTCAACCAATTTTCCTaGCTCAGCCTCCCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: LLILLNFPSMAEGGSLHDFNQFS*LSLPSS
Trigger: GCTACTTGGGAGGCTGAGGCAGGAAAATTGGTTGAA...ATCATGCAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR GCA 90 bp CTCTGTTTTATCCTTCACAGAATAAGCCAAATGAGAGTTGGAAGTGACTGCAGAACTCCCAGGCTGGAGTaGAGTGGCATGATCTCCACT +
Preference number: 4 (lower is better)
Translates to: LCFILHRISQMRVGSDCRTPRLE*SGMIST
Trigger: AGTGGAGATCATGCCACTGCACTCCAGCCTGGGAGT...TCTGCAGTCACTTCCAACTCTCATTTGGCTTATTCTGTGAAGGATAAAACAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR GCA 90 bp TACACCTGGCTCTGCCTTTTAGATAACAGTAGCAAAATTAGTGAAAGTACTAAATATCTCTGCCTTGGCTaGCAGGCAGGGAAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: YTWLCLLDNSSKISESTKYLCLG*QAGKGP
Trigger: GGGGCCCTTCCCTGCCTGGCAGCCAAGGCAGAGATA...TTTAGTACTTTCACTAATTTTGCTACTGTTATCTAAAAGGCAGAGCCAGGTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR GCA 90 bp GTGGTGTTTCACATGATGGTAGAGACTGCTGATTGCCCTCTTGAACCCAGCTTCGAGTTAAGAGGAGTTTaGTGTAGTTTGGGGAGCATA +
Preference number: 4 (lower is better)
Translates to: VVFHMMVETADCPLEPSFELRGV*CSLGSI
Trigger: TATGCTCCCCAAACTACAGCAAACTCCTCTTAACTC...GAAGCTGGGTTCAAGAGGGCAATCAGCAGTCTCTACCATCATGTGAAACACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR CCA 90 bp TTGTTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCATCTCCGTCAATGGGGATaGTTTTCCCGTGGTACTTAT +
Preference number: 4 (lower is better)
Translates to: LLLILLNFPSMAEGGSLHLRQWG*FSRGTY
Trigger: ATAAGTACCACGGGAAAACCATCCCCATTGACGGAG...ATGCAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261733.7
ENST00000416293.7
CDS-3UTR CCA 90 bp TCCGAATACCCAGGGAGATTAGGTGGTTCATCACCTGAGAGCTTTGTTTTTACTAGAAGTCTCCGTCAATaGGGATGGTTTTCCCGTGGT +
Preference number: 4 (lower is better)
Translates to: SEYPGRLGGSSPESFVFTRSLRQ*GWFSRG
Trigger: ACCACGGGAAAACCATCCCCATTGACGGAGACTTCT...AGTAAAAACAAAGCTCTCAGGTGATGAACCACCTAATCTCCCTGGGTATTCGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR CCA 90 bp CAGCTCTGTTTTATCCTTCACAGAATAAGCCAAATGAGAGTTGGAAGTGACTGCTCTCCTCCTTGGCGATaGTCATGCCATCCTGCACAT +
Preference number: 4 (lower is better)
Translates to: QLCFILHRISQMRVGSDCSPPWR*SCHPAH
Trigger: ATGTGCAGGATGGCATGACCATCGCCAAGGAGGAGA...GCAGTCACTTCCAACTCTCATTTGGCTTATTCTGTGAAGGATAAAACAGAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR CCA 90 bp TTGTTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCATCCTGGGACAGGTAATTaGCCTTGTCCAAATCCTTTG +
Preference number: 4 (lower is better)
Translates to: LLLILLNFPSMAEGGSLHPGTGN*PCPNPL
Trigger: CAAAGGATTTGGACAAGGCCAATTACCTGTCCCAGG...ATGCAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261733.7
ENST00000416293.7
CDS-3UTR CCA 90 bp CTCTGTTTTATCCTTCACAGAATAAGCCAAATGAGAGTTGGAAGTGACTGCAGATCTCGTCTCCGCACATaGGGAGAAAAACCCACCGAC +
Preference number: 4 (lower is better)
Translates to: LCFILHRISQMRVGSDCRSRLRT*GEKPTD
Trigger: GTCGGTGGGTTTTTCTCCCCATGTGCGGAGACGAGA...TCTGCAGTCACTTCCAACTCTCATTTGGCTTATTCTGTGAAGGATAAAACAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR CCA 90 bp CAGCTCTGTTTTATCCTTCACAGAATAAGCCAAATGAGAGTTGGAAGTGACTGCGAGAGCCTCAACCCTTaGACCTGTCTAAAGCACCAC +
Preference number: 4 (lower is better)
Translates to: QLCFILHRISQMRVGSDCESLNP*TCLKHH
Trigger: GTGGTGCTTTAGACAGGTCCAAGGGTTGAGGCTCTC...GCAGTCACTTCCAACTCTCATTTGGCTTATTCTGTGAAGGATAAAACAGAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR CAA 72 bp CAAAGTGAGTATCCATGGGACCTTGTGAAAGCCCATTaGCAGGGAGCTTGCACATCCAACATCACCTTTGAT +
Preference number: 4 (lower is better)
Translates to: QSEYPWDLVKAH*QGACTSNITFD
Trigger: ATCAAAGGTGATGTTGGATGTGCAAGCTCCCTGCAAATGGGCTTTCACAAGGTCCCATGGATACTCACTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR TCA 90 bp CTCTGTTTTATCCTTCACAGAATAAGCCAAATGAGAGTTGGAAGTGACTGCAGAGAAAGCCAGCCTCCTTaGTCAGGTTGGCCACATAGA +
Preference number: 4 (lower is better)
Translates to: LCFILHRISQMRVGSDCRESQPP*SGWPHR
Trigger: TCTATGTGGCCAACCTGATCAAGGAGGCTGGCTTTC...TCTGCAGTCACTTCCAACTCTCATTTGGCTTATTCTGTGAAGGATAAAACAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR TCA 90 bp TCCGAATACCCAGGGAGATTAGGTGGTTCATCACCTGAGAGCTTTGTTTTTACTATCCATATCGGCATCTaGCATGATGATGTTGGGGCT +
Preference number: 4 (lower is better)
Translates to: SEYPGRLGGSSPESFVFTIHIGI*HDDVGA
Trigger: AGCCCCAACATCATCATGTCAGATGCCGATATGGAT...AGTAAAAACAAAGCTCTCAGGTGATGAACCACCTAATCTCCCTGGGTATTCGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR TCA 90 bp GTTTTGTTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGGTTTTTACTGAGAACTaGATTGGGCACAGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: VLLLILLNFPSMAEGGSLVFTEN*IGHSGS
Trigger: TGAGCCACTGTGCCCAATTCAGTTCTCAGTAAAAAC...CAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAACAAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR TCA 90 bp TCCGAATACCCAGGGAGATTAGGTGGTTCATCACCTGAGAGCTTTGTTTTTACTCTGAAGTGGCATTGTTaGAATCCACGGCTCTACAGT +
Preference number: 4 (lower is better)
Translates to: SEYPGRLGGSSPESFVFTLKWHC*NPRLYS
Trigger: ACTGTAGAGCCGTGGATTTCAACAATGCCACTTCAG...AGTAAAAACAAAGCTCTCAGGTGATGAACCACCTAATCTCCCTGGGTATTCGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR GCA 90 bp CAGCTCTGTTTTATCCTTCACAGAATAAGCCAAATGAGAGTTGGAAGTGACTGCAGTGGAGCCTGTGAATaGCACTTTGTCCACATCCTC +
Preference number: 4 (lower is better)
Translates to: QLCFILHRISQMRVGSDCSGACE*HFVHIL
Trigger: GAGGATGTGGACAAAGTGGCATTCACAGGCTCCACT...GCAGTCACTTCCAACTCTCATTTGGCTTATTCTGTGAAGGATAAAACAGAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR GCA 90 bp GTGGTGTTTCACATGATGGTAGAGACTGCTGATTGCCCTCTTGAACCCAGCTTCAAATCATATCCAGTGTaGCATATCATTACTGCCTGC +
Preference number: 4 (lower is better)
Translates to: VVFHMMVETADCPLEPSFKSYPV*HIITAC
Trigger: GCAGGCAGTAATGATATGGCACACTGGATATGATTT...GAAGCTGGGTTCAAGAGGGCAATCAGCAGTCTCTACCATCATGTGAAACACCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR GCA 90 bp TTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCATGATAGGTGCCAGCCACCATaGCCAGCTAATTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: LLILLNFPSMAEGGSLHDRCQPP*PANFCI
Trigger: AATACAAAAATTAGCTGGGCATGGTGGCTGGCACCT...ATCATGCAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR GCA 90 bp TTGTTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCATCTGGCATGTAGTGGGTaGACAGTTAATACTTCTTGG +
Preference number: 4 (lower is better)
Translates to: LLLILLNFPSMAEGGSLHLACSG*TVNTSW
Trigger: CCAAGAAGTATTAACTGTGCACCCACTACATGCCAG...ATGCAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR GCA 90 bp CTATGGATTCCTGTTAATCTGTCCCAGCCTTGGGCTACCACACCTGCTTTGCACTTGACCTGTAAATCTTaGCAGTTATGTCACTGCATT +
Preference number: 4 (lower is better)
Translates to: LWIPVNLSQPWATTPALHLTCKS*QLCHCI
Trigger: AATGCAGTGACATAACTGGCAAGATTTACAGGTCAA...GTGCAAAGCAGGTGTGGTAGCCCAAGGCTGGGACAGATTAACAGGAATCCATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR CCA 90 bp CTCTGTTTTATCCTTCACAGAATAAGCCAAATGAGAGTTGGAAGTGACTGCAGAAATCTGTCCCAGCCTTaGGCTACCACACCTGCTTTG +
Preference number: 4 (lower is better)
Translates to: LCFILHRISQMRVGSDCRNLSQP*ATTPAL
Trigger: CAAAGCAGGTGTGGTAGCCCAAGGCTGGGACAGATT...TCTGCAGTCACTTCCAACTCTCATTTGGCTTATTCTGTGAAGGATAAAACAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR CCA 90 bp CAATGGCTGAGGGAGGAAGCTTGCATGATTCTTATGAGTTCTTCTGAGGCACTTATTTTCAATCTAGACTaGTTGCAGAAGACCTCGGGC +
Preference number: 4 (lower is better)
Translates to: QWLREEACMILMSSSEALIFNLD*LQKTSG
Trigger: GCCCGAGGTCTTCTGCAACCAGTCTAGATTGAAAAT...AAGTGCCTCAGAAGAACTCATAAGAATCATGCAAGCTTCCTCCCTCAGCCATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548536.1
CDS-3UTR TCA 90 bp GTTTTGTTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGTCTTATGAGTTCTTCTaGGGCACTTTGACTGTGACA +
Preference number: 4 (lower is better)
Translates to: VLLLILLNFPSMAEGGSLSYEFF*GTLTVT
Trigger: TGTCACAGTCAAAGTGCCTCAGAAGAACTCATAAGA...CAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAACAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261733.7
ENST00000416293.7
ENST00000549106.1
CDS-3UTR TCA 90 bp CAATGGCTGAGGGAGGAAGCTTGCATGATTCTTATGAGTTCTTCTGAGGCACTTTCTTATGAGTTCTTCTaGGGCACTTTGACTGTGACA +
Preference number: 4 (lower is better)
Translates to: QWLREEACMILMSSSEALSYEFF*GTLTVT
Trigger: TGTCACAGTCAAAGTGCCTCAGAAGAACTCATAAGA...AAGTGCCTCAGAAGAACTCATAAGAATCATGCAAGCTTCCTCCCTCAGCCATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548536.1
ENST00000549106.1
CDS-3UTR TCA 90 bp TTGTTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCATCCTTCCTTTGGTTATTaGGATGGACAAAGAGTTACC +
Preference number: 4 (lower is better)
Translates to: LLLILLNFPSMAEGGSLHPSFGY*DGQRVT
Trigger: GGTAACTCTTTGTCCATCTCAATAACCAAAGGAAGG...ATGCAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR TCA 90 bp TACACCTGGCTCTGCCTTTTAGATAACAGTAGCAAAATTAGTGAAAGTACTAAAAGCAGGAGGATCATTTaGGCCCAGGAGGTCGAGGCA +
Preference number: 4 (lower is better)
Translates to: YTWLCLLDNSSKISESTKSRRII*AQEVEA
Trigger: TGCCTCGACCTCCTGGGCTCAAATGATCCTCCTGCT...TTTAGTACTTTCACTAATTTTGCTACTGTTATCTAAAAGGCAGAGCCAGGTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR TCA 90 bp TTGTTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCATAGGTGGTTCATCACCTaGGAGCTTTGTTTTTACTTC +
Preference number: 4 (lower is better)
Translates to: LLLILLNFPSMAEGGSLHRWFIT*ELCFYF
Trigger: GAAGTAAAAACAAAGCTCTCAGGTGATGAACCACCT...ATGCAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR TCA 90 bp TTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCATGATATTCTTTCCAGTATGTaGTCCTGGTCTTTGATTCCC +
Preference number: 4 (lower is better)
Translates to: LLILLNFPSMAEGGSLHDILSSM*SWSLIP
Trigger: GGGAATCAAAGACCAGGATCACATACTGGAAAGAAT...ATCATGCAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR GCA 90 bp TTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCATGATCTGAGGGAGGAAGCTTaGATGATTCTTATGAGTTCT +
Preference number: 4 (lower is better)
Translates to: LLILLNFPSMAEGGSLHDLREEA*MILMSS
Trigger: AGAACTCATAAGAATCATGCAAGCTTCCTCCCTCAG...ATCATGCAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261733.7
ENST00000416293.7
ENST00000549106.1
CDS-3UTR GCA 90 bp TTGTTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCATCTGAGGGAGGAAGCTTaGATGATTCTTATGAGTTCT +
Preference number: 4 (lower is better)
Translates to: LLLILLNFPSMAEGGSLHLREEA*MILMSS
Trigger: AGAACTCATAAGAATCATGCAAGCTTCCTCCCTCAG...ATGCAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261733.7
ENST00000416293.7
ENST00000549106.1
CDS-3UTR GCA 90 bp GTTTTGTTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCATATCATTACTGCCTaGCAGCATTTCCTTAGGCTA +
Preference number: 4 (lower is better)
Translates to: VLLLILLNFPSMAEGGSLHIITA*QHFLRL
Trigger: TAGCCTAAGGAAATGCTGGCAGGCAGTAATGATATG...CAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAACAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR GCA 90 bp TTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCATGATCCTCATTACACTGCCTaGCAAATGTACAGCCAAATT +
Preference number: 4 (lower is better)
Translates to: LLILLNFPSMAEGGSLHDPHYTA*QMYSQI
Trigger: AATTTGGCTGTACATTTGGCAGGCAGTGTAATGAGG...ATCATGCAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR GCA 90 bp CTCTGTTTTATCCTTCACAGAATAAGCCAAATGAGAGTTGGAAGTGACTGCAGAAAGCTATTAGGGCTGTaGCCAGTGTCTCATGCCTGT +
Preference number: 4 (lower is better)
Translates to: LCFILHRISQMRVGSDCRKLLGL*PVSHAC
Trigger: ACAGGCATGAGACACTGGGCACAGCCCTAATAGCTT...TCTGCAGTCACTTCCAACTCTCATTTGGCTTATTCTGTGAAGGATAAAACAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR CCA 90 bp GTTTTGTTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGTTGTTTATGAAAATCTaGTTGCAGAAGACCTCGGGC +
Preference number: 4 (lower is better)
Translates to: VLLLILLNFPSMAEGGSLLFMKI*LQKTSG
Trigger: GCCCGAGGTCTTCTGCAACCAGATTTTCATAAACAA...CAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAACAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261733.7
ENST00000416293.7
CDS-3UTR CCA 90 bp TACACCTGGCTCTGCCTTTTAGATAACAGTAGCAAAATTAGTGAAAGTACTAAACGGCCAGCCCGTACGTaGAATTGTTGGCTCTCCCAA +
Preference number: 4 (lower is better)
Translates to: YTWLCLLDNSSKISESTKRPART*NCWLSQ
Trigger: TTGGGAGAGCCAACAATTCCACGTACGGGCTGGCCG...TTTAGTACTTTCACTAATTTTGCTACTGTTATCTAAAAGGCAGAGCCAGGTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR CCA 90 bp GTGGTGTTTCACATGATGGTAGAGACTGCTGATTGCCCTCTTGAACCCAGCTTCCTTTGGTTATTGAGATaGACAAAGAGTTACCCAGTA +
Preference number: 4 (lower is better)
Translates to: VVFHMMVETADCPLEPSFLWLLR*TKSYPV
Trigger: TACTGGGTAACTCTTTGTCCATCTCAATAACCAAAG...GAAGCTGGGTTCAAGAGGGCAATCAGCAGTCTCTACCATCATGTGAAACACCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR CCA 90 bp GTTTTGTTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGGAGACTCAAGAGGTCTaGTTACTGAAGATACAGATC +
Preference number: 4 (lower is better)
Translates to: VLLLILLNFPSMAEGGSLETQEV*LLKIQI
Trigger: GATCTGTATCTTCAGTAACCAGACCTCTTGAGTCTC...CAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAACAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR CCA 90 bp TTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCATGATCAGTACATGGAAAACTaGATGCGTATAGCCAACCAA +
Preference number: 4 (lower is better)
Translates to: LLILLNFPSMAEGGSLHDQYMEN*MRIANQ
Trigger: TTGGTTGGCTATACGCATCCAGTTTTCCATGTACTG...ATCATGCAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR CAA 72 bp GAGATGACTCACACTCTTTACCCTGCCCCTTTTGCTTaGTATCCAATAAATAACAGTGCAGCCAGACATTCG +
Preference number: 4 (lower is better)
Translates to: EMTHTLYPAPFA*YPINNSAARHS
Trigger: CGAATGTCTGGCTGCACTGTTATTTATTGGATACAAAGCAAAAGGGGCAGGGTAAAGAGTGTGAGTCATCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR CAA 72 bp TTTGGTCTTTATCTTTATTGCTGTGTTCGTCCCCTTTaGTTCAGTCCAACAGGGATTAGGTCCACGTCACCT +
Preference number: 4 (lower is better)
Translates to: FGLYLYCCVRPL*FSPTGIRSTSP
Trigger: AGGTGACGTGGACCTAATCCCTGTTGGACTGAACAAAAGGGGACGAACACAGCAATAAAGATAAAGACCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR TCA 90 bp TACACCTGGCTCTGCCTTTTAGATAACAGTAGCAAAATTAGTGAAAGTACTAAACAGCTACCTGACAGATaGCCTCTCCAGTGGACGGAT +
Preference number: 4 (lower is better)
Translates to: YTWLCLLDNSSKISESTKQLPDR*PLQWTD
Trigger: ATCCGTCCACTGGAGAGGTCATCTGTCAGGTAGCTG...TTTAGTACTTTCACTAATTTTGCTACTGTTATCTAAAAGGCAGAGCCAGGTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR TCA 90 bp TTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCATGATAAGAGGTCTGGTTACTaGAGATACAGATCTCACTTA +
Preference number: 4 (lower is better)
Translates to: LLILLNFPSMAEGGSLHDKRSGY*RYRSHL
Trigger: TAAGTGAGATCTGTATCTTCAGTAACCAGACCTCTT...ATCATGCAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR TCA 90 bp TCCGAATACCCAGGGAGATTAGGTGGTTCATCACCTGAGAGCTTTGTTTTTACTCTTTGCCAGGTATCTTaGCTAGAGGAAGATAGTGTT +
Preference number: 4 (lower is better)
Translates to: SEYPGRLGGSSPESFVFTLCQVS*LEEDSV
Trigger: AACACTATCTTCCTCTAGTCAAGATACCTGGCAAAG...AGTAAAAACAAAGCTCTCAGGTGATGAACCACCTAATCTCCCTGGGTATTCGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR GCA 90 bp AAAATTAACACTGAGTTACAAACTGAAGTGGCATTGTTGAAATCCACGGCTCTATTTCACTTCAGTGTATaGCTGCAGCCCGTACTCGCC +
Preference number: 4 (lower is better)
Translates to: KINTELQTEVALLKSTALFHFSV*LQPVLA
Trigger: GGCGAGTACGGGCTGCAGGCATACACTGAAGTGAAA...TAGAGCCGTGGATTTCAACAATGCCACTTCAGTTTGTAACTCAGTGTTAATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR GCA 90 bp TTGTTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCATGCAGGGTGTAGCAGTTaGCTTAATGGTGATATAATT +
Preference number: 4 (lower is better)
Translates to: LLLILLNFPSMAEGGSLHAGCSS*LNGDII
Trigger: AATTATATCACCATTAAGGCAACTGCTACACCCTGC...ATGCAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR GCA 90 bp CAGCTCTGTTTTATCCTTCACAGAATAAGCCAAATGAGAGTTGGAAGTGACTGCATTCCCTCATTACACTaGCTGCCAAATGTACAGCCA +
Preference number: 4 (lower is better)
Translates to: QLCFILHRISQMRVGSDCIPSLH*LPNVQP
Trigger: TGGCTGTACATTTGGCAGGCAGTGTAATGAGGGAAT...GCAGTCACTTCCAACTCTCATTTGGCTTATTCTGTGAAGGATAAAACAGAGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR GCA 90 bp TCCGAATACCCAGGGAGATTAGGTGGTTCATCACCTGAGAGCTTTGTTTTTACTAGAGTTGGAAGTGACTaGAGAGATTGTGAGGAAATG +
Preference number: 4 (lower is better)
Translates to: SEYPGRLGGSSPESFVFTRVGSD*RDCEEM
Trigger: CATTTCCTCACAATCTCTGCAGTCACTTCCAACTCT...AGTAAAAACAAAGCTCTCAGGTGATGAACCACCTAATCTCCCTGGGTATTCGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR GCA 90 bp GTTTTGTTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGGGTCTTTATCTTTATTaGTGTGTTCGTCCCCTTTTG +
Preference number: 4 (lower is better)
Translates to: VLLLILLNFPSMAEGGSLGLYLY*CVRPLL
Trigger: CAAAAGGGGACGAACACAGCAATAAAGATAAAGACC...CAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAACAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR CCA 90 bp CTCTGTTTTATCCTTCACAGAATAAGCCAAATGAGAGTTGGAAGTGACTGCAGAGAGAGCTGCCCAGCCTaGCCTTACATTCTTTCAATT +
Preference number: 4 (lower is better)
Translates to: LCFILHRISQMRVGSDCRESCPA*PYILSI
Trigger: AATTGAAAGAATGTAAGGCCAGGCTGGGCAGCTCTC...TCTGCAGTCACTTCCAACTCTCATTTGGCTTATTCTGTGAAGGATAAAACAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR TCA 90 bp TTGTTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCATGCCATTCATTGTTTATaGAAATCTGGTTGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: LLLILLNFPSMAEGGSLHAIHCL*KSGCRR
Trigger: TCTTCTGCAACCAGATTTTCATAAACAATGAATGGC...ATGCAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261733.7
ENST00000416293.7
CDS-3UTR TCA 90 bp TACACCTGGCTCTGCCTTTTAGATAACAGTAGCAAAATTAGTGAAAGTACTAAACTTGCTTCCCCGTGTTaGTGTAGCCGAGGATCTTCT +
Preference number: 4 (lower is better)
Translates to: YTWLCLLDNSSKISESTKLASPC*CSRGSS
Trigger: AGAAGATCCTCGGCTACATCAACACGGGGAAGCAAG...TTTAGTACTTTCACTAATTTTGCTACTGTTATCTAAAAGGCAGAGCCAGGTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR GCA 90 bp GTTTTGTTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCAGGCATCACATCTATaGTCTCACTCTAATATATGT +
Preference number: 4 (lower is better)
Translates to: VLLLILLNFPSMAEGGSLQASHL*SHSNIC
Trigger: ACATATATTAGAGTGAGAGCATAGATGTGATGCCTG...CAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAACAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR CCA 90 bp CAGCTCTGTTTTATCCTTCACAGAATAAGCCAAATGAGAGTTGGAAGTGACTGCTTGTTTATGAAAATCTaGTTGCAGAAGACCTCGGGC +
Preference number: 4 (lower is better)
Translates to: QLCFILHRISQMRVGSDCLFMKI*LQKTSG
Trigger: GCCCGAGGTCTTCTGCAACCAGATTTTCATAAACAA...GCAGTCACTTCCAACTCTCATTTGGCTTATTCTGTGAAGGATAAAACAGAGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR CCA 90 bp CTCTGTTTTATCCTTCACAGAATAAGCCAAATGAGAGTTGGAAGTGACTGCAGATCCATCCTGTACACCTaGCTCTGCCTTTTAGATAAC +
Preference number: 4 (lower is better)
Translates to: LCFILHRISQMRVGSDCRSILYT*LCLLDN
Trigger: GTTATCTAAAAGGCAGAGCCAGGTGTACAGGATGGA...TCTGCAGTCACTTCCAACTCTCATTTGGCTTATTCTGTGAAGGATAAAACAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR GCA 90 bp CTCTGTTTTATCCTTCACAGAATAAGCCAAATGAGAGTTGGAAGTGACTGCAGACTACTGTTCAAAGAATaGAATCTTGTGAGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: LCFILHRISQMRVGSDCRLLFKE*NLVSLL
Trigger: CAGCAGGCTCACAAGATTGCATTCTTTGAACAGTAG...TCTGCAGTCACTTCCAACTCTCATTTGGCTTATTCTGTGAAGGATAAAACAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR GCA 90 bp TTGTTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCATAGGCATGATAATTTTTaGTATTGTTTCCTTGGTCAC +
Preference number: 4 (lower is better)
Translates to: LLLILLNFPSMAEGGSLHRHDNF*YCFLGH
Trigger: GTGACCAAGGAAACAATAGCAAAAATTATCATGCCT...ATGCAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAACAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR TCA 90 bp CAGCTCTGTTTTATCCTTCACAGAATAAGCCAAATGAGAGTTGGAAGTGACTGCGCCATTCATTGTTTATaGAAATCTGGTTGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: QLCFILHRISQMRVGSDCAIHCL*KSGCRR
Trigger: TCTTCTGCAACCAGATTTTCATAAACAATGAATGGC...GCAGTCACTTCCAACTCTCATTTGGCTTATTCTGTGAAGGATAAAACAGAGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR TCA 90 bp TACACCTGGCTCTGCCTTTTAGATAACAGTAGCAAAATTAGTGAAAGTACTAAAAGGATCTTCTTAAACTaGGTTTCATCCACCTGCGGC +
Preference number: 4 (lower is better)
Translates to: YTWLCLLDNSSKISESTKRIFLN*VSSTCG
Trigger: GCCGCAGGTGGATGAAACTCAGTTTAAGAAGATCCT...TTTAGTACTTTCACTAATTTTGCTACTGTTATCTAAAAGGCAGAGCCAGGTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR GCA 90 bp TCCGAATACCCAGGGAGATTAGGTGGTTCATCACCTGAGAGCTTTGTTTTTACTACTGTTTATCATAAATaGAGAATGTGGGCAAACTCA +
Preference number: 4 (lower is better)
Translates to: SEYPGRLGGSSPESFVFTTVYHK*RMWANS
Trigger: TGAGTTTGCCCACATTCTGCATTTATGATAAACAGT...AGTAAAAACAAAGCTCTCAGGTGATGAACCACCTAATCTCCCTGGGTATTCGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR GCA 90 bp TACACCTGGCTCTGCCTTTTAGATAACAGTAGCAAAATTAGTGAAAGTACTAAATCAGAAAATGAGAGCTaGCCAGCCTGGCCTTACATT +
Preference number: 4 (lower is better)
Translates to: YTWLCLLDNSSKISESTKSENES*PAWPYI
Trigger: AATGTAAGGCCAGGCTGGGCAGCTCTCATTTTCTGA...TTTAGTACTTTCACTAATTTTGCTACTGTTATCTAAAAGGCAGAGCCAGGTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR CCA 90 bp CTCTGTTTTATCCTTCACAGAATAAGCCAAATGAGAGTTGGAAGTGACTGCAGATCCTTTCTTATCTGTTaGTTAAAAGAGCCGATCCTC +
Preference number: 4 (lower is better)
Translates to: LCFILHRISQMRVGSDCRSFLIC*LKEPIL
Trigger: GAGGATCGGCTCTTTTAACCAACAGATAAGAAAGGA...TCTGCAGTCACTTCCAACTCTCATTTGGCTTATTCTGTGAAGGATAAAACAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR CAA 72 bp TCCACGGCTCTACAGTTAGGAGAACAAGTACAAAGCTaGCAATTGCAACAGCAATTGCACCATCATTTTAAT +
Preference number: 4 (lower is better)
Translates to: STALQLGEQVQS*QLQQQLHHHFN
Trigger: ATTAAAATGATGGTGCAATTGCTGTTGCAATTGCAAGCTTTGTACTTGTTCTCCTAACTGTAGAGCCGTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR GCA 90 bp TACACCTGGCTCTGCCTTTTAGATAACAGTAGCAAAATTAGTGAAAGTACTAAAATCCACATCGCAACATaGATCAGCACTTCCTTCCTT +
Preference number: 4 (lower is better)
Translates to: YTWLCLLDNSSKISESTKIHIAT*ISTSFL
Trigger: AAGGAAGGAAGTGCTGATGCATGTTGCGATGTGGAT...TTTAGTACTTTCACTAATTTTGCTACTGTTATCTAAAAGGCAGAGCCAGGTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR GCA 90 bp CTCTGTTTTATCCTTCACAGAATAAGCCAAATGAGAGTTGGAAGTGACTGCAGAAACAAGTACAAAGCTTaGAATTGCAACAGCAATTGC +
Preference number: 4 (lower is better)
Translates to: LCFILHRISQMRVGSDCRNKYKA*NCNSNC
Trigger: GCAATTGCTGTTGCAATTGCAAGCTTTGTACTTGTT...TCTGCAGTCACTTCCAACTCTCATTTGGCTTATTCTGTGAAGGATAAAACAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR CCA 90 bp TACACCTGGCTCTGCCTTTTAGATAACAGTAGCAAAATTAGTGAAAGTACTAAAATCTCTCCCCTCTCTTaGGCATCATGTTTAGGTTCT +
Preference number: 4 (lower is better)
Translates to: YTWLCLLDNSSKISESTKISPLS*ASCLGS
Trigger: AGAACCTAAACATGATGCCCAAGAGAGGGGAGAGAT...TTTAGTACTTTCACTAATTTTGCTACTGTTATCTAAAAGGCAGAGCCAGGTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR CCA 90 bp CAGCTCTGTTTTATCCTTCACAGAATAAGCCAAATGAGAGTTGGAAGTGACTGCCATGTCACTTTCATTTaGCCTGATCAAGTTTTTACT +
Preference number: 4 (lower is better)
Translates to: QLCFILHRISQMRVGSDCHVTFI*PDQVFT
Trigger: AGTAAAAACTTGATCAGGCCAAATGAAAGTGACATG...GCAGTCACTTCCAACTCTCATTTGGCTTATTCTGTGAAGGATAAAACAGAGCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR CAA 72 bp CCCATTTGCAGGGAGCTTGCACATCCAACATCACCTTaGATATCGGTGAATTACAAAACAAAATTCTTGATT +
Preference number: 4 (lower is better)
Translates to: PICRELAHPTSP*ISVNYKTKFLI
Trigger: AATCAAGAATTTTGTTTTGTAATTCACCGATATCAAAGGTGATGTTGGATGTGCAAGCTCCCTGCAAATGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR CAA 72 bp ACATTGCAAACACATAATGTCTCTACTTTGATAATTTaGGGTCGCATCCCTGGGCTATGGATTCCTGTTAAT +
Preference number: 4 (lower is better)
Translates to: TLQTHNVSTLII*GRIPGLWIPVN
Trigger: ATTAACAGGAATCCATAGCCCAGGGATGCGACCCAAAATTATCAAAGTAGAGACATTATGTGTTTGCAATGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR CAA 72 bp AGAGCCTTAGGCATGATAATTTTTGCTATTGTTTCCTaGGTCACATTAATAACTTCCGTTGTGATGTCCTCT +
Preference number: 4 (lower is better)
Translates to: RALGMIIFAIVS*VTLITSVVMSS
Trigger: AGAGGACATCACAACGGAAGTTATTAATGTGACCAAGGAAACAATAGCAAAAATTATCATGCCTAAGGCTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR GCA 90 bp TACACCTGGCTCTGCCTTTTAGATAACAGTAGCAAAATTAGTGAAAGTACTAAATACAGCCAAATTGTATaGAACATCGTTGGAAGGACA +
Preference number: 4 (lower is better)
Translates to: YTWLCLLDNSSKISESTKYSQIV*NIVGRT
Trigger: TGTCCTTCCAACGATGTTGCATACAATTTGGCTGTA...TTTAGTACTTTCACTAATTTTGCTACTGTTATCTAAAAGGCAGAGCCAGGTGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR TCA 90 bp TACACCTGGCTCTGCCTTTTAGATAACAGTAGCAAAATTAGTGAAAGTACTAAAATTCTAGAACTTTCTTaGCCCAAGAGATTTTGTAGG +
Preference number: 4 (lower is better)
Translates to: YTWLCLLDNSSKISESTKILELS*PKRFCR
Trigger: CCTACAAAATCTCTTGGGTCAAGAAAGTTCTAGAAT...TTTAGTACTTTCACTAATTTTGCTACTGTTATCTAAAAGGCAGAGCCAGGTGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR CAA 72 bp AATAAAATTAACACTGAGTTACAAACTGAAGTGGCATaGTTGAAATCCACGGCTCTACAGTTAGGAGAACAA +
Preference number: 4 (lower is better)
Translates to: NKINTELQTEVA*LKSTALQLGEQ
Trigger: TTGTTCTCCTAACTGTAGAGCCGTGGATTTCAACAATGCCACTTCAGTTTGTAACTCAGTGTTAATTTTATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
3UTR CAA 72 bp ACATTAATAACTTCCGTTGTGATGTCCTCTGTAGCTTaGCATAGTTCTATTCAAACAACTCAGTACATGGAA +
Preference number: 4 (lower is better)
Translates to: TLITSVVMSSVA*HSSIQTTQYME
Trigger: TTCCATGTACTGAGTTGTTTGAATAGAACTATGCAAAGCTACAGAGGACATCACAACGGAAGTTATTAATGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS TCA 90 bp CTCGGGCTGCTGGTTGGGGGCAGGCACGGCCTGGGTGGCGGCGGCTaGCAAGAGGCGGCGGCCCAGGCGGGGCCCGAAGCGGGCGGCAGC +
Preference number: 5 (lower is better)
Translates to: LGLLVGGRHGLGGGG*QEAAAQAGPEAGGS
Trigger: GCTGCCGCCCGCTTCGGGCCCCGCCTGGGCCGCCGCCTCTTGTCAGCCGCCGCCACCCAGGCCGTGCCTGCCCCCAACCAGCAGCCCGAG
80% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261733.7
ENST00000416293.7
ENST00000548536.1
CDS-3UTR CAA 90 bp CACTTCAGTGTATGCCTGCAGCCCGTACTCGCCCAACTCCCGGCCACTCCCCGACCGACCACCCGAGACTaGGCCCGGGCAACGCTCCGC +
Preference number: 5 (lower is better)
Translates to: HFSVCLQPVLAQLPATPRPTTRD*ARATLR
Trigger: GCGGAGCGTTGCCCGGGCCAAGTCTCGGGTGGTCGG...TCGGGGAGTGGCCGGGAGTTGGGCGAGTACGGGCTGCAGGCATACACTGAAGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548536.1
ENST00000549106.1
CDS-3UTR CAA 90 bp AAAGGGGTTCCCGACCACCCGAGACTTGGCCCGGGCAACGCTCCGCTCCACAAACAACCACGTTTCCAGTaGCCAAGGCTGGGCCCAGCT +
Preference number: 5 (lower is better)
Translates to: KGVPDHPRLGPGNAPLHKQPRFQ*PRLGPA
Trigger: AGCTGGGCCCAGCCTTGGCAACTGGAAACGTGGTTG...TTTGTGGAGCGGAGCGTTGCCCGGGCCAAGTCTCGGGTGGTCGGGAACCCCTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548536.1
CDS CCA 90 bp GTTGACATTTTCAATCTAGACTGGTTGCAGAAGACCTCGGGCTGCTaGTTGGGGGCAGGCACGGCCTGGGTGGCGGCGGCTGACAAGAGG +
Preference number: 5 (lower is better)
Translates to: VDIFNLDWLQKTSGC*LGAGTAWVAAADKR
Trigger: CCTCTTGTCAGCCGCCGCCACCCAGGCCGTGCCTGCCCCCAACCAGCAGCCCGAGGTCTTCTGCAACCAGTCTAGATTGAAAATGTCAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548536.1
CDS-3UTR CAA 90 bp CATAGGGCTTGCCATTGTCCAGGGTCTCCAAGGCCGCCAGGTAGGTCCGGTCCCTCCAAGGTCACTCTCTaGAGGTTGCTGCTCCCAGCA +
Preference number: 5 (lower is better)
Translates to: HRACHCPGSPRPPGRSGPSKVTL*RLLLPA
Trigger: TGCTGGGAGCAGCAACCTCAAGAGAGTGACCTTGGA...GGGACCGGACCTACCTGGCGGCCTTGGAGACCCTGGACAATGGCAAGCCCTATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548536.1
CDS CCA 90 bp CATTCATTGTTTATGAAAATCTGGTTGCAGAAGACCTCGGGCTGCTaGTTGGGGGCAGGCACGGCCTGGGTGGCGGCGGCTGACAAGAGG +
Preference number: 5 (lower is better)
Translates to: HSLFMKIWLQKTSGC*LGAGTAWVAAADKR
Trigger: CCTCTTGTCAGCCGCCGCCACCCAGGCCGTGCCTGCCCCCAACCAGCAGCCCGAGGTCTTCTGCAACCAGATTTTCATAAACAATGAATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261733.7
ENST00000416293.7
CDS-3UTR CAA 90 bp GCAGTTGACCCACACAGTGCCCGCCTGGAGGGCCTGGGACAGGTAATTGGCCTTAATCCAGGCACAATGTaGACCACACCAGGGGGAAAG +
Preference number: 5 (lower is better)
Translates to: AVDPHSARLEGLGQVIGLNPGTM*TTPGGK
Trigger: CTTTCCCCCTGGTGTGGTCAACATTGTGCCTGGATT...AAGGCCAATTACCTGTCCCAGGCCCTCCAGGCGGGCACTGTGTGGGTCAACTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548536.1
CDS-3UTR CAA 90 bp CGTACTCGCCCAACTCCCGGCCACTCCCCGACATCTTGTAGCCACCAAAGGGTGCCTGTGAATGCCACTTaGTCCACATCCTCATGGGAG +
Preference number: 5 (lower is better)
Translates to: RTRPTPGHSPTSCSHQRVPVNAT*STSSWE
Trigger: CTCCCATGAGGATGTGGACAAAGTGGCATTCACAGG...CACCCTTTGGTGGCTACAAGATGTCGGGGAGTGGCCGGGAGTTGGGCGAGTACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548536.1
CDS-3UTR CAA 90 bp GACAGTTTTCACTTCAGTGTATGCCTGCAGCCCGTACTCGCCCAACTCCCGGCCCAGCTTCGCCCCCTCTaGCTTCCCCGTGTTGATGTA +
Preference number: 5 (lower is better)
Translates to: DSFHFSVCLQPVLAQLPAQLRPL*LPRVDV
Trigger: TACATCAACACGGGGAAGCAAGAGGGGGCGAAGCTG...GGCCGGGAGTTGGGCGAGTACGGGCTGCAGGCATACACTGAAGTGAAAACTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000548536.1
ENST00000549106.1
CDS-3UTR CAA 90 bp GTTTTGTTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCCGACCACCCGAGACTaGGCCCGGGCAACGCTCCGC +
Preference number: 5 (lower is better)
Translates to: VLLLILLNFPSMAEGGSLPTTRD*ARATLR
Trigger: GCGGAGCGTTGCCCGGGCCAAGTCTCGGGTGGTCGG...CAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAACAAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261733.7
ENST00000416293.7
ENST00000549106.1
CDS-3UTR CAA 90 bp CACTTCAGTGTATGCCTGCAGCCCGTACTCGCCCAACTCCCGGCCACTCCCCGAACCTCCTCTATGGTCTaGAACTTCAGGATCTGCATC +
Preference number: 5 (lower is better)
Translates to: HFSVCLQPVLAQLPATPRTSSMV*NFRICI
Trigger: GATGCAGATCCTGAAGTTCAAGACCATAGAGGAGGT...TCGGGGAGTGGCCGGGAGTTGGGCGAGTACGGGCTGCAGGCATACACTGAAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548536.1
CDS-3UTR CAA 90 bp AAAGGGGTTCCCGACCACCCGAGACTTGGCCCGGGCAACGCTCCGCTCCACAAAGCTGAGGGAGGAAGCTaGCATGATTCTTATGAGTTC +
Preference number: 5 (lower is better)
Translates to: KGVPDHPRLGPGNAPLHKAEGGS*HDSYEF
Trigger: GAACTCATAAGAATCATGCAAGCTTCCTCCCTCAGC...TTTGTGGAGCGGAGCGTTGCCCGGGCCAAGTCTCGGGTGGTCGGGAACCCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548536.1
CDS-3UTR CAA 90 bp TCCGAATACCCAGGGAGATTAGGTGGTTCATCACCTGAGAGCTTTGTTTTTACTCCGACCACCCGAGACTaGGCCCGGGCAACGCTCCGC +
Preference number: 5 (lower is better)
Translates to: SEYPGRLGGSSPESFVFTPTTRD*ARATLR
Trigger: GCGGAGCGTTGCCCGGGCCAAGTCTCGGGTGGTCGG...AGTAAAAACAAAGCTCTCAGGTGATGAACCACCTAATCTCCCTGGGTATTCGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR CAA 90 bp CCTGGGCTATGGATTCCTGTTAATCTGTCCCAGCCTTGGGCTACCACACCTGCTCCGAAGATCTCCTCCTaGGCGATGGTCATGCCATCC +
Preference number: 5 (lower is better)
Translates to: PGLWIPVNLSQPWATTPAPKISS*AMVMPS
Trigger: GGATGGCATGACCATCGCCAAGGAGGAGATCTTCGG...AGCAGGTGTGGTAGCCCAAGGCTGGGACAGATTAACAGGAATCCATAGCCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR CAA 90 bp ACCTCTCCAGTGGACGGATTGACGGTGGGGAATGTTTTCCTGCTGACGGCATCGCCGTACGTGGAATTGTaGGCTCTCCCAACAACCTCC +
Preference number: 5 (lower is better)
Translates to: TSPVDGLTVGNVFLLTASPYVEL*ALPTTS
Trigger: GGAGGTTGTTGGGAGAGCCAACAATTCCACGTACGG...CGATGCCGTCAGCAGGAAAACATTCCCCACCGTCAATCCGTCCACTGGAGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548536.1
CDS-3UTR CAA 90 bp ACTGTGACAGTTTTCACTTCAGTGTATGCCTGCAGCCCGTACTCGCCCAACTCCCCGAAGATCTCCTCCTaGGCGATGGTCATGCCATCC +
Preference number: 5 (lower is better)
Translates to: TVTVFTSVYACSPYSPNSPKISS*AMVMPS
Trigger: GGATGGCATGACCATCGCCAAGGAGGAGATCTTCGG...GGAGTTGGGCGAGTACGGGCTGCAGGCATACACTGAAGTGAAAACTGTCACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548536.1
CDS-3UTR CAA 90 bp GTGGTGTTTCACATGATGGTAGAGACTGCTGATTGCCCTCTTGAACCCAGCTTCACCGGTCTCCGCCTCTaGGTGGTAGTGGTCCCCCAA +
Preference number: 5 (lower is better)
Translates to: VVFHMMVETADCPLEPSFTGLRL*VVVVPQ
Trigger: TTGGGGGACCACTACCACCAAGAGGCGGAGACCGGT...GAAGCTGGGTTCAAGAGGGCAATCAGCAGTCTCTACCATCATGTGAAACACCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR CAA 90 bp GTGGTGTTTCACATGATGGTAGAGACTGCTGATTGCCCTCTTGAACCCAGCTTCCAACCACGTTTCCAGTaGCCAAGGCTGGGCCCAGCT +
Preference number: 5 (lower is better)
Translates to: VVFHMMVETADCPLEPSFQPRFQ*PRLGPA
Trigger: AGCTGGGCCCAGCCTTGGCAACTGGAAACGTGGTTG...GAAGCTGGGTTCAAGAGGGCAATCAGCAGTCTCTACCATCATGTGAAACACCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR CAA 90 bp CTATGGATTCCTGTTAATCTGTCCCAGCCTTGGGCTACCACACCTGCTTTGCACCAGCTTCGCCCCCTCTaGCTTCCCCGTGTTGATGTA +
Preference number: 5 (lower is better)
Translates to: LWIPVNLSQPWATTPALHQLRPL*LPRVDV
Trigger: TACATCAACACGGGGAAGCAAGAGGGGGCGAAGCTG...GTGCAAAGCAGGTGTGGTAGCCCAAGGCTGGGACAGATTAACAGGAATCCATAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR CAA 90 bp ACTGTGACAGTTTTCACTTCAGTGTATGCCTGCAGCCCGTACTCGCCCAACTCCAGCCCGTACGTGGAATaGTTGGCTCTCCCAACAACC +
Preference number: 5 (lower is better)
Translates to: TVTVFTSVYACSPYSPNSSPYVE*LALPTT
Trigger: GGTTGTTGGGAGAGCCAACAATTCCACGTACGGGCT...GGAGTTGGGCGAGTACGGGCTGCAGGCATACACTGAAGTGAAAACTGTCACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548536.1
CDS-3UTR CAA 90 bp CCTGGGCTATGGATTCCTGTTAATCTGTCCCAGCCTTGGGCTACCACACCTGCTTTGTATGCAACATCGTaGGAAGGACACCGGTGGGAG +
Preference number: 5 (lower is better)
Translates to: PGLWIPVNLSQPWATTPALYATS*EGHRWE
Trigger: CTCCCACCGGTGTCCTTCCAACGATGTTGCATACAA...AGCAGGTGTGGTAGCCCAAGGCTGGGACAGATTAACAGGAATCCATAGCCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR CAA 90 bp CCTGGGCTATGGATTCCTGTTAATCTGTCCCAGCCTTGGGCTACCACACCTGCTTGGGATTTCACCATGTaGGCCAGGCTAGTCTCGAAC +
Preference number: 5 (lower is better)
Translates to: PGLWIPVNLSQPWATTPAWDFTM*ARLVSN
Trigger: GTTCGAGACTAGCCTGGCCAACATGGTGAAATCCCA...AGCAGGTGTGGTAGCCCAAGGCTGGGACAGATTAACAGGAATCCATAGCCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR CAA 90 bp CAGCCCGTACGTGGAATTGTTGGCTCTCCCAACAACCTCCTCTATGGTCTTGAAGCCCAGCTTCCATGCTaGCATCAGGAGCGGGAAATT +
Preference number: 5 (lower is better)
Translates to: QPVRGIVGSPNNLLYGLEAQLPC*HQEREI
Trigger: AATTTCCCGCTCCTGATGCAAGCATGGAAGCTGGGC...TTCAAGACCATAGAGGAGGTTGTTGGGAGAGCCAACAATTCCACGTACGGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548536.1
CDS-3UTR CAA 90 bp CCTGGGCTATGGATTCCTGTTAATCTGTCCCAGCCTTGGGCTACCACACCTGCTTGGGTTTTCATCATGTaGGCCAGGCTGATCTCGAAC +
Preference number: 5 (lower is better)
Translates to: PGLWIPVNLSQPWATTPAWVFIM*ARLISN
Trigger: GTTCGAGATCAGCCTGGCCAACATGATGAAAACCCA...AGCAGGTGTGGTAGCCCAAGGCTGGGACAGATTAACAGGAATCCATAGCCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR CAA 90 bp GTTTTGTTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCAACCACGTTTCCAGTaGCCAAGGCTGGGCCCAGCT +
Preference number: 5 (lower is better)
Translates to: VLLLILLNFPSMAEGGSLQPRFQ*PRLGPA
Trigger: AGCTGGGCCCAGCCTTGGCAACTGGAAACGTGGTTG...CAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAACAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261733.7
ENST00000416293.7
CDS-3UTR CAA 90 bp GTGGTGTTTCACATGATGGTAGAGACTGCTGATTGCCCTCTTGAACCCAGCTTCCCGTACGTGGAATTGTaGGCTCTCCCAACAACCTCC +
Preference number: 5 (lower is better)
Translates to: VVFHMMVETADCPLEPSFPYVEL*ALPTTS
Trigger: GGAGGTTGTTGGGAGAGCCAACAATTCCACGTACGG...GAAGCTGGGTTCAAGAGGGCAATCAGCAGTCTCTACCATCATGTGAAACACCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR CAA 90 bp TTGTTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCATCAGCTTCGCCCCCTCTaGCTTCCCCGTGTTGATGTA +
Preference number: 5 (lower is better)
Translates to: LLLILLNFPSMAEGGSLHQLRPL*LPRVDV
Trigger: TACATCAACACGGGGAAGCAAGAGGGGGCGAAGCTG...ATGCAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261733.7
ENST00000416293.7
ENST00000549106.1
CDS-3UTR CAA 90 bp TTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCATGATCCGAAGATCTCCTCCTaGGCGATGGTCATGCCATCC +
Preference number: 5 (lower is better)
Translates to: LLILLNFPSMAEGGSLHDPKISS*AMVMPS
Trigger: GGATGGCATGACCATCGCCAAGGAGGAGATCTTCGG...ATCATGCAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261733.7
ENST00000416293.7
CDS-3UTR CAA 90 bp TTGTTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCATAAGCAGGAGGATCATTaGAGCCCAGGAGGTCGAGGC +
Preference number: 5 (lower is better)
Translates to: LLLILLNFPSMAEGGSLHKQEDH*SPGGRG
Trigger: GCCTCGACCTCCTGGGCTCAAATGATCCTCCTGCTT...ATGCAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR CAA 90 bp CAACATCGTTGGAAGGACACCGGTGGGAGGGGCTGTCCTGTTAATTCTTGGAGACATATTGAAAACACATaGTTGGCTGTGGGCGGCAAG +
Preference number: 5 (lower is better)
Translates to: QHRWKDTGGRGCPVNSWRHIENT*LAVGGK
Trigger: CTTGCCGCCCACAGCCAACAATGTGTTTTCAATATG...TCTCCAAGAATTAACAGGACAGCCCCTCCCACCGGTGTCCTTCCAACGATGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR CAA 90 bp TTGTTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCATGCCCAGCTTCCATGCTaGCATCAGGAGCGGGAAATT +
Preference number: 5 (lower is better)
Translates to: LLLILLNFPSMAEGGSLHAQLPC*HQEREI
Trigger: AATTTCCCGCTCCTGATGCAAGCATGGAAGCTGGGC...ATGCAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261733.7
ENST00000416293.7
CDS-3UTR CAA 90 bp GTTTTGTTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGTCCAAGGTCACTCTCTaGAGGTTGCTGCTCCCAGCA +
Preference number: 5 (lower is better)
Translates to: VLLLILLNFPSMAEGGSLSKVTL*RLLLPA
Trigger: TGCTGGGAGCAGCAACCTCAAGAGAGTGACCTTGGA...CAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAACAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261733.7
ENST00000416293.7
CDS-3UTR CAA 90 bp GTTTTGTTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCCGTACGTGGAATTGTaGGCTCTCCCAACAACCTCC +
Preference number: 5 (lower is better)
Translates to: VLLLILLNFPSMAEGGSLPYVEL*ALPTTS
Trigger: GGAGGTTGTTGGGAGAGCCAACAATTCCACGTACGG...CAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAACAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261733.7
ENST00000416293.7
CDS-3UTR CAA 90 bp TTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCATGATAGCCCGTACGTGGAATaGTTGGCTCTCCCAACAACC +
Preference number: 5 (lower is better)
Translates to: LLILLNFPSMAEGGSLHDSPYVE*LALPTT
Trigger: GGTTGTTGGGAGAGCCAACAATTCCACGTACGGGCT...ATCATGCAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261733.7
ENST00000416293.7
CDS-3UTR CAA 90 bp GTTTTGTTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGAGCCCGTACGTGGAATaGTTGGCTCTCCCAACAACC +
Preference number: 5 (lower is better)
Translates to: VLLLILLNFPSMAEGGSLSPYVE*LALPTT
Trigger: GGTTGTTGGGAGAGCCAACAATTCCACGTACGGGCT...CAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAACAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261733.7
ENST00000416293.7
CDS-3UTR CAA 90 bp CTATGGATTCCTGTTAATCTGTCCCAGCCTTGGGCTACCACACCTGCTTTGCACTATCTCTCCCCTCTCTaGGGCATCATGTTTAGGTTC +
Preference number: 5 (lower is better)
Translates to: LWIPVNLSQPWATTPALHYLSPL*GIMFRF
Trigger: GAACCTAAACATGATGCCCAAGAGAGGGGAGAGATA...GTGCAAAGCAGGTGTGGTAGCCCAAGGCTGGGACAGATTAACAGGAATCCATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR CAA 90 bp TTGTTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCATCACTGTGCCCGGCCTTaGCCAGGTATCTTGACTAGA +
Preference number: 5 (lower is better)
Translates to: LLLILLNFPSMAEGGSLHHCARP*PGILTR
Trigger: TCTAGTCAAGATACCTGGCAAAGGCCGGGCACAGTG...ATGCAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR CAA 90 bp AAAATTAACACTGAGTTACAAACTGAAGTGGCATTGTTGAAATCCACGGCTCTAGGCTGGTCCCTACAGTaGGCCGGGCACGGTGGCTCA +
Preference number: 5 (lower is better)
Translates to: KINTELQTEVALLKSTALGWSLQ*AGHGGS
Trigger: TGAGCCACCGTGCCCGGCCAACTGTAGGGACCAGCC...TAGAGCCGTGGATTTCAACAATGCCACTTCAGTTTGTAACTCAGTGTTAATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR CAA 90 bp GTGGTGCTGTGCTTCAGTGGTCACGCTCCTAGTCTGCCTTCATGTTCCATCCTGTCCGTGTACAAGTTTTaGTTGGGAGTCTCTGTTTTC +
Preference number: 5 (lower is better)
Translates to: VVLCFSGHAPSLPSCSILSVYKF*LGVSVF
Trigger: GAAAACAGAGACTCCCAACAAAAACTTGTACACGGA...CAGGATGGAACATGAAGGCAGACTAGGAGCGTGACCACTGAAGCACAGCACCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR CAA 90 bp TTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCATGATGGAGAGCCTCAACCCTaGGACCTGTCTAAAGCACCA +
Preference number: 5 (lower is better)
Translates to: LLILLNFPSMAEGGSLHDGEPQP*DLSKAP
Trigger: TGGTGCTTTAGACAGGTCCAAGGGTTGAGGCTCTCC...ATCATGCAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR CAA 90 bp TTGTTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCATAATCCAGGCACAATGTaGACCACACCAGGGGGAAAG +
Preference number: 5 (lower is better)
Translates to: LLLILLNFPSMAEGGSLHNPGTM*TTPGGK
Trigger: CTTTCCCCCTGGTGTGGTCAACATTGTGCCTGGATT...ATGCAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261733.7
ENST00000416293.7
CDS-3UTR CAA 90 bp TTGTTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCATCCTGTGAATGCCACTTaGTCCACATCCTCATGGGAG +
Preference number: 5 (lower is better)
Translates to: LLLILLNFPSMAEGGSLHPVNAT*STSSWE
Trigger: CTCCCATGAGGATGTGGACAAAGTGGCATTCACAGG...ATGCAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261733.7
ENST00000416293.7
CDS-3UTR CAA 90 bp CCTGGGCTATGGATTCCTGTTAATCTGTCCCAGCCTTGGGCTACCACACCTGCTCCTGCCCCTTTTGCTTaGTATCCAATAAATAACAGT +
Preference number: 5 (lower is better)
Translates to: PGLWIPVNLSQPWATTPAPAPFA*YPINNS
Trigger: ACTGTTATTTATTGGATACAAAGCAAAAGGGGCAGG...AGCAGGTGTGGTAGCCCAAGGCTGGGACAGATTAACAGGAATCCATAGCCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR CAA 90 bp CAACATCGTTGGAAGGACACCGGTGGGAGGGGCTGTCCTGTTAATTCTTGGAGAATTGTTAAGAAGCTCTaGAGAAGGCTCCAAGTACAG +
Preference number: 5 (lower is better)
Translates to: QHRWKDTGGRGCPVNSWRIVKKL*RRLQVQ
Trigger: CTGTACTTGGAGCCTTCTCAAGAGCTTCTTAACAAT...TCTCCAAGAATTAACAGGACAGCCCCTCCCACCGGTGTCCTTCCAACGATGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR CAA 90 bp GTGGTGCTGTGCTTCAGTGGTCACGCTCCTAGTCTGCCTTCATGTTCCATCCTGTTAAACAACCAGCTCTaGAGTGAACTCATTACCATG +
Preference number: 5 (lower is better)
Translates to: VVLCFSGHAPSLPSCSILLNNQL*SELITM
Trigger: CATGGTAATGAGTTCACTCAAGAGCTGGTTGTTTAA...CAGGATGGAACATGAAGGCAGACTAGGAGCGTGACCACTGAAGCACAGCACCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR CAA 90 bp CCTGGGCTATGGATTCCTGTTAATCTGTCCCAGCCTTGGGCTACCACACCTGCTATCCTTATGTCTTTTTaGGCAACTAAGAAGGACCAG +
Preference number: 5 (lower is better)
Translates to: PGLWIPVNLSQPWATTPAILMSF*ATKKDQ
Trigger: CTGGTCCTTCTTAGTTGCCAAAAAAGACATAAGGAT...AGCAGGTGTGGTAGCCCAAGGCTGGGACAGATTAACAGGAATCCATAGCCCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR CAA 90 bp CAACATCGTTGGAAGGACACCGGTGGGAGGGGCTGTCCTGTTAATTCTTGGAGAGCATCGTGCCATTCATaGTTTATGAAAATCTGGTTG +
Preference number: 5 (lower is better)
Translates to: QHRWKDTGGRGCPVNSWRASCHS*FMKIWL
Trigger: CAACCAGATTTTCATAAACAATGAATGGCACGATGC...TCTCCAAGAATTAACAGGACAGCCCCTCCCACCGGTGTCCTTCCAACGATGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR CAA 90 bp TACACCTGGCTCTGCCTTTTAGATAACAGTAGCAAAATTAGTGAAAGTACTAAAAGAAGTCACTCCCCCTaGGTCCCTTCCCAGGGCCCC +
Preference number: 5 (lower is better)
Translates to: YTWLCLLDNSSKISESTKRSHSP*VPSQGP
Trigger: GGGGCCCTGGGAAGGGACCAAGGGGGAGTGACTTCT...TTTAGTACTTTCACTAATTTTGCTACTGTTATCTAAAAGGCAGAGCCAGGTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR CAA 90 bp TTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCATGATTTTATGAAAATCTGGTaGCAGAAGACCTCGGGCTGC +
Preference number: 5 (lower is better)
Translates to: LLILLNFPSMAEGGSLHDFMKIW*QKTSGC
Trigger: GCAGCCCGAGGTCTTCTGCAACCAGATTTTCATAAA...ATCATGCAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261733.7
ENST00000416293.7
CDS-3UTR CAA 90 bp TTGTTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCATTTTATGAAAATCTGGTaGCAGAAGACCTCGGGCTGC +
Preference number: 5 (lower is better)
Translates to: LLLILLNFPSMAEGGSLHFMKIW*QKTSGC
Trigger: GCAGCCCGAGGTCTTCTGCAACCAGATTTTCATAAA...ATGCAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261733.7
ENST00000416293.7
CDS-3UTR CAA 90 bp CAGCTCTGTTTTATCCTTCACAGAATAAGCCAAATGAGAGTTGGAAGTGACTGCTCTCCAGTGGACGGATaGACGGTGGGGAATGTTTTC +
Preference number: 5 (lower is better)
Translates to: QLCFILHRISQMRVGSDCSPVDG*TVGNVF
Trigger: GAAAACATTCCCCACCGTCAATCCGTCCACTGGAGA...GCAGTCACTTCCAACTCTCATTTGGCTTATTCTGTGAAGGATAAAACAGAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR CAA 90 bp CTCTGTTTTATCCTTCACAGAATAAGCCAAATGAGAGTTGGAAGTGACTGCAGATCCAAGGTCACTCTCTaGAGGTTGCTGCTCCCAGCA +
Preference number: 5 (lower is better)
Translates to: LCFILHRISQMRVGSDCRSKVTL*RLLLPA
Trigger: TGCTGGGAGCAGCAACCTCAAGAGAGTGACCTTGGA...TCTGCAGTCACTTCCAACTCTCATTTGGCTTATTCTGTGAAGGATAAAACAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR CAA 90 bp TTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCATGATACCTCCTCTATGGTCTaGAACTTCAGGATCTGCATC +
Preference number: 5 (lower is better)
Translates to: LLILLNFPSMAEGGSLHDTSSMV*NFRICI
Trigger: GATGCAGATCCTGAAGTTCAAGACCATAGAGGAGGT...ATCATGCAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261733.7
ENST00000416293.7
CDS-3UTR CAA 90 bp TTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCATGATGCTGAGGGAGGAAGCTaGCATGATTCTTATGAGTTC +
Preference number: 5 (lower is better)
Translates to: LLILLNFPSMAEGGSLHDAEGGS*HDSYEF
Trigger: GAACTCATAAGAATCATGCAAGCTTCCTCCCTCAGC...ATCATGCAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261733.7
ENST00000416293.7
ENST00000549106.1
CDS-3UTR CAA 90 bp TTGTTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCATACTGAAGTGGCATTGTaGAAATCCACGGCTCTACAG +
Preference number: 5 (lower is better)
Translates to: LLLILLNFPSMAEGGSLHTEVAL*KSTALQ
Trigger: CTGTAGAGCCGTGGATTTCAACAATGCCACTTCAGT...ATGCAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR CAA 90 bp ATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCATGATTCTTATTTCAATCTAGACTGGTaGCAGAAGACCTCGGGCTGC +
Preference number: 5 (lower is better)
Translates to: ILLNFPSMAEGGSLHDSYFNLDW*QKTSGC
Trigger: GCAGCCCGAGGTCTTCTGCAACCAGTCTAGATTGAA...ATAAGAATCATGCAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548536.1
CDS-3UTR CAA 90 bp GTGGTGTTTCACATGATGGTAGAGACTGCTGATTGCCCTCTTGAACCCAGCTTCAAGCTAGCAGTATTGTaGTCGTTTAAAAGGTTCCTC +
Preference number: 5 (lower is better)
Translates to: VVFHMMVETADCPLEPSFKLAVL*SFKRFL
Trigger: GAGGAACCTTTTAAACGACAACAATACTGCTAGCTT...GAAGCTGGGTTCAAGAGGGCAATCAGCAGTCTCTACCATCATGTGAAACACCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR CAA 90 bp GTGGTGTTTCACATGATGGTAGAGACTGCTGATTGCCCTCTTGAACCCAGCTTCACCTTCCTTTGGTTATaGAGATGGACAAAGAGTTAC +
Preference number: 5 (lower is better)
Translates to: VVFHMMVETADCPLEPSFTFLWL*RWTKSY
Trigger: GTAACTCTTTGTCCATCTCAATAACCAAAGGAAGGT...GAAGCTGGGTTCAAGAGGGCAATCAGCAGTCTCTACCATCATGTGAAACACCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR CAA 90 bp CTATGGATTCCTGTTAATCTGTCCCAGCCTTGGGCTACCACACCTGCTTTGCACCAATTGCAACAGCAATaGCACCATCATTTTAATCAC +
Preference number: 5 (lower is better)
Translates to: LWIPVNLSQPWATTPALHQLQQQ*HHHFNH
Trigger: GTGATTAAAATGATGGTGCAATTGCTGTTGCAATTG...GTGCAAAGCAGGTGTGGTAGCCCAAGGCTGGGACAGATTAACAGGAATCCATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR CAA 90 bp ATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCATGATTCTTATGCTGAGGGAGGAAGCTaGCATGATTCTTATGAGTTC +
Preference number: 5 (lower is better)
Translates to: ILLNFPSMAEGGSLHDSYAEGGS*HDSYEF
Trigger: GAACTCATAAGAATCATGCAAGCTTCCTCCCTCAGC...ATAAGAATCATGCAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548536.1
ENST00000549106.1
CDS-3UTR CAA 90 bp TTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCATGATCATCACCTGAGAGCTTaGTTTTTACTTCAGACAGCT +
Preference number: 5 (lower is better)
Translates to: LLILLNFPSMAEGGSLHDHHLRA*FLLQTA
Trigger: AGCTGTCTGAAGTAAAAACAAAGCTCTCAGGTGATG...ATCATGCAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR CAA 90 bp GTGGTGTTTCACATGATGGTAGAGACTGCTGATTGCCCTCTTGAACCCAGCTTCAAATGTACAGCCAAATaGTATGCAACATCGTTGGAA +
Preference number: 5 (lower is better)
Translates to: VVFHMMVETADCPLEPSFKCTAK*YATSLE
Trigger: TTCCAACGATGTTGCATACAATTTGGCTGTACATTT...GAAGCTGGGTTCAAGAGGGCAATCAGCAGTCTCTACCATCATGTGAAACACCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR CAA 90 bp GTTTTGTTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGGTACAAAGCTTGCAATaGCAACAGCAATTGCACCAT +
Preference number: 5 (lower is better)
Translates to: VLLLILLNFPSMAEGGSLVQSLQ*QQQLHH
Trigger: ATGGTGCAATTGCTGTTGCAATTGCAAGCTTTGTAC...CAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAACAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR CAA 90 bp GTTTTGTTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGGCATCGTGCCATTCATaGTTTATGAAAATCTGGTTG +
Preference number: 5 (lower is better)
Translates to: VLLLILLNFPSMAEGGSLASCHS*FMKIWL
Trigger: CAACCAGATTTTCATAAACAATGAATGGCACGATGC...CAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAACAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261733.7
ENST00000416293.7
CDS-3UTR CAA 90 bp GTTTTGTTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGGTTTTGTTGCTGATCTaGCTGAACTTTCCATCAATG +
Preference number: 5 (lower is better)
Translates to: VLLLILLNFPSMAEGGSLVLLLI*LNFPSM
Trigger: CATTGATGGAAAGTTCAGCAAGATCAGCAACAAAAC...CAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAACAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261733.7
ENST00000416293.7
ENST00000549106.1
CDS-3UTR CAA 90 bp TTGTTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCATCCCTACCAAGGTTCTTaGCAGTATTCTTTTCTTGTT +
Preference number: 5 (lower is better)
Translates to: LLLILLNFPSMAEGGSLHPYQGS*QYSFLV
Trigger: AACAAGAAAAGAATACTGCAAAGAACCTTGGTAGGG...ATGCAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR CAA 90 bp TTGTTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCATTTCCTTTCTTATCTGTaGGTTAAAAGAGCCGATCCT +
Preference number: 5 (lower is better)
Translates to: LLLILLNFPSMAEGGSLHFLSYL*VKRADP
Trigger: AGGATCGGCTCTTTTAACCAACAGATAAGAAAGGAA...ATGCAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR CAA 90 bp TTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGCATGATGTCCTTGGAATAATGTaGTTTTGTCTCTGTCTTCTG +
Preference number: 5 (lower is better)
Translates to: LLILLNFPSMAEGGSLHDVLGIM*FCLCLL
Trigger: CAGAAGACAGAGACAAAACAACATTATTCCAAGGAC...ATCATGCAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR CAA 90 bp GTTTTGTTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGGAACAAGTACAAAGCTaGCAATTGCAACAGCAATTG +
Preference number: 5 (lower is better)
Translates to: VLLLILLNFPSMAEGGSLEQVQS*QLQQQL
Trigger: CAATTGCTGTTGCAATTGCAAGCTTTGTACTTGTTC...CAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAACAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR CAA 90 bp TTCCATCAATGGCTGAGGGAGGAAGCTTGCATGATTCTTATGAGTTCTTCTGAGGTTTTGTTGCTGATCTaGCTGAACTTTCCATCAATG +
Preference number: 5 (lower is better)
Translates to: FHQWLREEACMILMSSSEVLLLI*LNFPSM
Trigger: CATTGATGGAAAGTTCAGCAAGATCAGCAACAAAAC...CTCAGAAGAACTCATAAGAATCATGCAAGCTTCCTCCCTCAGCCATTGATGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549106.1
CDS-3UTR CAA 90 bp CTCTGTTTTATCCTTCACAGAATAAGCCAAATGAGAGTTGGAAGTGACTGCAGAATGGAAGCTCAGAAGTaGTGTGGTTTGTCCAAGTTC +
Preference number: 5 (lower is better)
Translates to: LCFILHRISQMRVGSDCRMEAQK*CGLSKF
Trigger: GAACTTGGACAAACCACACAACTTCTGAGCTTCCAT...TCTGCAGTCACTTCCAACTCTCATTTGGCTTATTCTGTGAAGGATAAAACAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR CAA 90 bp GTTTTGTTGCTGATCTTGCTGAACTTTCCATCAATGGCTGAGGGAGGAAGCTTGGTAAACAATATCCAATaGACCTGTAAATCTTGCCAG +
Preference number: 5 (lower is better)
Translates to: VLLLILLNFPSMAEGGSLVNNIQ*TCKSCQ
Trigger: CTGGCAAGATTTACAGGTCAATTGGATATTGTTTAC...CAAGCTTCCTCCCTCAGCCATTGATGGAAAGTTCAGCAAGATCAGCAACAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR CAA 90 bp TACACCTGGCTCTGCCTTTTAGATAACAGTAGCAAAATTAGTGAAAGTACTAAATTACTGAGAACTGAATaGGGCACAGTGGCTCACACC +
Preference number: 5 (lower is better)
Translates to: YTWLCLLDNSSKISESTKLLRTE*GTVAHT
Trigger: GGTGTGAGCCACTGTGCCCAATTCAGTTCTCAGTAA...TTTAGTACTTTCACTAATTTTGCTACTGTTATCTAAAAGGCAGAGCCAGGTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR CAA 90 bp TCCGAATACCCAGGGAGATTAGGTGGTTCATCACCTGAGAGCTTTGTTTTTACTTCTCTCTATATAGATTaGCCTGTTCTGGATATTTCC +
Preference number: 5 (lower is better)
Translates to: SEYPGRLGGSSPESFVFTSLYID*PVLDIS
Trigger: GGAAATATCCAGAACAGGCAAATCTATATAGAGAGA...AGTAAAAACAAAGCTCTCAGGTGATGAACCACCTAATCTCCCTGGGTATTCGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR CAA 90 bp TACACCTGGCTCTGCCTTTTAGATAACAGTAGCAAAATTAGTGAAAGTACTAAAACCTCCTCTATGGTCTaGAACTTCAGGATCTGCATC +
Preference number: 5 (lower is better)
Translates to: YTWLCLLDNSSKISESTKTSSMV*NFRICI
Trigger: GATGCAGATCCTGAAGTTCAAGACCATAGAGGAGGT...TTTAGTACTTTCACTAATTTTGCTACTGTTATCTAAAAGGCAGAGCCAGGTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR CAA 90 bp TACACCTGGCTCTGCCTTTTAGATAACAGTAGCAAAATTAGTGAAAGTACTAAAGCTGAGGGAGGAAGCTaGCATGATTCTTATGAGTTC +
Preference number: 5 (lower is better)
Translates to: YTWLCLLDNSSKISESTKAEGGS*HDSYEF
Trigger: GAACTCATAAGAATCATGCAAGCTTCCTCCCTCAGC...TTTAGTACTTTCACTAATTTTGCTACTGTTATCTAAAAGGCAGAGCCAGGTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS-3UTR CAA 90 bp TACACCTGGCTCTGCCTTTTAGATAACAGTAGCAAAATTAGTGAAAGTACTAAAGTTTTGTTGCTGATCTaGCTGAACTTTCCATCAATG +
Preference number: 5 (lower is better)
Translates to: YTWLCLLDNSSKISESTKVLLLI*LNFPSM
Trigger: CATTGATGGAAAGTTCAGCAAGATCAGCAACAAAAC...TTTAGTACTTTCACTAATTTTGCTACTGTTATCTAAAAGGCAGAGCCAGGTGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261733.7
CDS CCA 72 bp TTCAATCTAGACTGGTTGCAGAAGACCTCGGGCTGCTaGTTGGGGGCAGGCACGGCCTGGGTGGCGGCGGCT +
Preference number: 6 (lower is better)
Translates to: FNLDWLQKTSGC*LGAGTAWVAAA
Trigger: AGCCGCCGCCACCCAGGCCGTGCCTGCCCCCAACCAGCAGCCCGAGGTCTTCTGCAACCAGTCTAGATTGAA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548536.1
CDS CAA 90 bp GACATTTTCAATCTAGACTGGTTGCAGAAGACCTCGGGCTGCTGGTaGGGGGCAGGCACGGCCTGGGTGGCGGCGGCTGACAAGAGGCGG +
Preference number: 6 (lower is better)
Translates to: DIFNLDWLQKTSGCW*GAGTAWVAAADKRR
Trigger: CCGCCTCTTGTCAGCCGCCGCCACCCAGGCCGTGCCTGCCCCCAACCAGCAGCCCGAGGTCTTCTGCAACCAGTCTAGATTGAAAATGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548536.1
CDS GCA 72 bp ATTTTCAATCTAGACTGGTTGCAGAAGACCTCGGGCTaGTGGTTGGGGGCAGGCACGGCCTGGGTGGCGGCG +
Preference number: 6 (lower is better)
Translates to: IFNLDWLQKTSG*WLGAGTAWVAA
Trigger: CGCCGCCACCCAGGCCGTGCCTGCCCCCAACCAGCAGCCCGAGGTCTTCTGCAACCAGTCTAGATTGAAAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548536.1
CDS CCA 72 bp TTTATGAAAATCTGGTTGCAGAAGACCTCGGGCTGCTaGTTGGGGGCAGGCACGGCCTGGGTGGCGGCGGCT +
Preference number: 6 (lower is better)
Translates to: FMKIWLQKTSGC*LGAGTAWVAAA
Trigger: AGCCGCCGCCACCCAGGCCGTGCCTGCCCCCAACCAGCAGCCCGAGGTCTTCTGCAACCAGATTTTCATAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261733.7
ENST00000416293.7
CDS CAA 90 bp TCATTGTTTATGAAAATCTGGTTGCAGAAGACCTCGGGCTGCTGGTaGGGGGCAGGCACGGCCTGGGTGGCGGCGGCTGACAAGAGGCGG +
Preference number: 6 (lower is better)
Translates to: SLFMKIWLQKTSGCW*GAGTAWVAAADKRR
Trigger: CCGCCTCTTGTCAGCCGCCGCCACCCAGGCCGTGCCTGCCCCCAACCAGCAGCCCGAGGTCTTCTGCAACCAGATTTTCATAAACAATGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261733.7
ENST00000416293.7
CDS GCA 72 bp TTGTTTATGAAAATCTGGTTGCAGAAGACCTCGGGCTaGTGGTTGGGGGCAGGCACGGCCTGGGTGGCGGCG +
Preference number: 6 (lower is better)
Translates to: LFMKIWLQKTSG*WLGAGTAWVAA
Trigger: CGCCGCCACCCAGGCCGTGCCTGCCCCCAACCAGCAGCCCGAGGTCTTCTGCAACCAGATTTTCATAAACAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261733.7
ENST00000416293.7
CDS TCA 72 bp TCCAGGGTCTCCAAGGCCTTGTCCCCTTCAGCTACCTaGCAGATGACCTCTCCAGTGGACGGATTGACGGTG +
Preference number: 6 (lower is better)
Translates to: SRVSKALSPSAT*QMTSPVDGLTV
Trigger: CACCGTCAATCCGTCCACTGGAGAGGTCATCTGTCAGGTAGCTGAAGGGGACAAGGCCTTGGAGACCCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416293.7
CDS CCA 72 bp AGGAAAAGCTCTCTGTGCCCTCTGTGCAGCCACAAGTaGAGGCTCTACCCAGAAGCAGCGGCTTTACACCTG +
Preference number: 6 (lower is better)
Translates to: RKSSLCPLCSHK*RLYPEAAALHL
Trigger: CAGGTGTAAAGCCGCTGCTTCTGGGTAGAGCCTCCACTTGTGGCTGCACAGAGGGCACAGAGAGCTTTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551450.1
CDS GCA 72 bp ATCATAGCAGTTGACCCTCCTCCTTGGCGATGGTCATaGCATCCTGCACATCTCCAAACACAGTGGGCTGGA +
Preference number: 6 (lower is better)
Translates to: IIAVDPPPWRWS*HPAHLQTQWAG
Trigger: TCCAGCCCACTGTGTTTGGAGATGTGCAGGATGGCATGACCATCGCCAAGGAGGAGGGTCAACTGCTATGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549106.1
CDS CAA 72 bp GGGAATGTTTTCCTGCTGACGGCATCGTGCCATTCATaGTTTATGAAAATCTGGTTGCAGAAGACCTCGGGC +
Preference number: 6 (lower is better)
Translates to: GNVFLLTASCHS*FMKIWLQKTSG
Trigger: GCCCGAGGTCTTCTGCAACCAGATTTTCATAAACAATGAATGGCACGATGCCGTCAGCAGGAAAACATTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261733.7
ENST00000416293.7
CDS TCA 72 bp CTTTATAGTTTCCAGAAGCACAGTGATGTCTGGAGTTaGCATTTTCAATCTAGACTGGTTGCAGAAGACCTC +
Preference number: 6 (lower is better)
Translates to: LYSFQKHSDVWS*HFQSRLVAEDL
Trigger: GAGGTCTTCTGCAACCAGTCTAGATTGAAAATGTCAACTCCAGACATCACTGTGCTTCTGGAAACTATAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548536.1