RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ALDH1L2 (Homo sapiens)

Ensembl gene IDs: ENSG00000136010

Ensembl transcript IDs: ENST00000258494.14, ENST00000548418.1, ENST00000549335.5, ENST00000550088.1, ENST00000552270.1, ENST00000552427.1, ENST00000652515.1

Found 670 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAGGAAGTGAGCCAGCCAGCCATGAGGTTGTGTATGGACAAGAGTTaGAGGAAGAGGCAGTGGTGTGCTGGTGCTGGCTTGCATTTGTTC +
Preference number: 1 (lower is better)
Translates to: QEVSQPAMRLCMDKS*RKRQWCAGAGLHLF
Trigger: GAACAAATGCAAGCCAGCACCAGCACACCACTGCCTCTTCCTGCAACTCTTGTCCATACACAACCTCATGGCTGGCTGGCTCACTTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR GCA 90 bp GATGTTGATGACCCCCTTTGGAAAGCCTGCTTTCACAGACAGTTCTaGAAACTTCAAAGCAGTCAAGGGCGTGACCTGTGCTGGCTTGAG +
Preference number: 1 (lower is better)
Translates to: DVDDPLWKACFHRQF*KLQSSQGRDLCWLE
Trigger: CTCAAGCCAGCACAGGTCACGCCCTTGACTGCTTTGAAGTTTGCAGAACTGTCTGTGAAAGCAGGCTTTCCAAAGGGGGTCATCAACATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552270.1
3UTR CCA 90 bp GGGCCCATGATCAGTGGATCACTCTTGTCACAAATTCGTCGTGGATaGATTCTTCCACGAACAACCGCCCAGCAGCAATACAGTTCTCTC +
Preference number: 1 (lower is better)
Translates to: GPMISGSLLSQIRRG*ILPRTTAQQQYSSL
Trigger: GAGAGAACTGTATTGCTGCTGGGCGGTTGTTCGTGGAAGAATCCATCCACGACGAATTTGTGACAAGAGTGATCCACTGATCATGGGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552270.1
3UTR GCA 90 bp TGGACAAGAGTTGCAGGAAGAGGCAGTGGTGTGCTGGTGCTGGCTTaGATTTGTTCTGATGGCATGCATCTCTTCCCAAACTCTGTATTC +
Preference number: 1 (lower is better)
Translates to: WTRVAGRGSGVLVLA*ICSDGMHLFPNSVF
Trigger: GAATACAGAGTTTGGGAAGAGATGCATGCCATCAGAACAAATGCAAGCCAGCACCAGCACACCACTGCCTCTTCCTGCAACTCTTGTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR TCA 90 bp ACCATCTGTCCATTTATCTCTGTCCAAGCTCCAGGGACTTTATCATaGCCTCGAATCCAGTTATGTAAAACTTCGGCAGACTGGTCCCAA +
Preference number: 1 (lower is better)
Translates to: TICPFISVQAPGTLS*PRIQLCKTSADWSQ
Trigger: TTGGGACCAGTCTGCCGAAGTTTTACATAACTGGATTCGAGGTCATGATAAAGTCCCTGGAGCTTGGACAGAGATAAATGGACAGATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552270.1
3UTR TCA 90 bp TCATGTGATTCAGAAATTTGCCGCCTTCTAGTCACACATAGATGGTaGAAATTTACTCACCTGACTACTTCTGTCTGCCAATGGGAAATG +
Preference number: 1 (lower is better)
Translates to: SCDSEICRLLVTHRW*KFTHLTTSVCQWEM
Trigger: CATTTCCCATTGGCAGACAGAAGTAGTCAGGTGAGTAAATTTTCACCATCTATGTGTGACTAGAAGGCGGCAAATTTCTGAATCACATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR TCA 90 bp GGAGTTGCGAGAGTTTCCCAAAGTTACATAGATAGGAAGATGGTATaGTACGACCAGGATCAGCCTTCTACTATATCATATGTAAAATTT +
Preference number: 1 (lower is better)
Translates to: GVARVSQSYIDRKMV*YDQDQPSTISYVKF
Trigger: AAATTTTACATATGATATAGTAGAAGGCTGATCCTGGTCGTATCATACCATCTTCCTATCTATGTAACTTTGGGAAACTCTCGCAACTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR CCA 90 bp CCAATGGGAAATGGGCTGTTAATAGTTTCCATTTCTTCAATGCTATaGTCCAAACGCCTTGTTAAGTGCATTATGTATATTATCTCACTG +
Preference number: 1 (lower is better)
Translates to: PMGNGLLIVSISSML*SKRLVKCIMYIISL
Trigger: CAGTGAGATAATATACATAATGCACTTAACAAGGCGTTTGGACCATAGCATTGAAGAAATGGAAACTATTAACAGCCCATTTCCCATTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR GCA 90 bp GAGTTAAATTTGAGTACTTACCATGAGCAAAGCATTAATGTGAGGTaGTTTACTTACATTACTGCAATGAATTCTCCTATTAAGGGTCCT +
Preference number: 1 (lower is better)
Translates to: ELNLSTYHEQSINVR*FTYITAMNSPIKGP
Trigger: AGGACCCTTAATAGGAGAATTCATTGCAGTAATGTAAGTAAAGCACCTCACATTAATGCTTTGCTCATGGTAAGTACTCAAATTTAACTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR-3UTR TCA 90 bp ACCAGCACACCCCTGGGAAGAGGAAGAATAAGGACAGAGGCCCTGAGGCAGGAGGCAGGCTGGGGAGGGTaGTGTTCCAATTCCAGTTCA +
Preference number: 2 (lower is better)
Translates to: TSTPLGRGRIRTEALRQEAGWGG*CSNSSS
Trigger: TGAACTGGAATTGGAACATCACCCTCCCCAGCCTGC...CTCCTGCCTCAGGGCCTCTGTCCTTATTCTTCCTCTTCCCAGGGGTGTGCTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR CAA 90 bp AAAGCAGTCAAGGGCGTGACCTGTGCTGGCTTGAGCACTAAGGTATaGCCTGCTGCCAAACACGCAGCACTCTTCCATGCCAGCATCATC +
Preference number: 2 (lower is better)
Translates to: KAVKGVTCAGLSTKV*PAAKHAALFHASII
Trigger: GATGATGCTGGCATGGAAGAGTGCTGCGTGTTTGGCAGCAGGCAATACCTTAGTGCTCAAGCCAGCACAGGTCACGCCCTTGACTGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552270.1
3UTR-3UTR TCA 90 bp TTGAGGAGAGACCTGCAGGAAGTGAGCCAGCCAGCCATGAGGTTGTGTATGGACGCAGGCTTGTTCTGTTaGGGAAGTCAAGGCAGTCAG +
Preference number: 2 (lower is better)
Translates to: LRRDLQEVSQPAMRLCMDAGLFC*GSQGSQ
Trigger: CTGACTGCCTTGACTTCCTCAACAGAACAAGCCTGC...GTCCATACACAACCTCATGGCTGGCTGGCTCACTTCCTGCAGGTCTCTCCTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR-3UTR GCA 90 bp TTGAGGAGAGACCTGCAGGAAGTGAGCCAGCCAGCCATGAGGTTGTGTATGGACGTGGCTGACACCTCCTaGCTCAACACACCCAATCTT +
Preference number: 2 (lower is better)
Translates to: LRRDLQEVSQPAMRLCMDVADTS*LNTPNL
Trigger: AAGATTGGGTGTGTTGAGGCAGGAGGTGTCAGCCAC...GTCCATACACAACCTCATGGCTGGCTGGCTCACTTCCTGCAGGTCTCTCCTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR-3UTR GCA 90 bp ACCAGCACACCCCTGGGAAGAGGAAGAATAAGGACAGAGGCCCTGAGGCAGGAGAGGCACATGTGTAAATaGTTTAACATGGCCTGGCCC +
Preference number: 2 (lower is better)
Translates to: TSTPLGRGRIRTEALRQERHMCK*FNMAWP
Trigger: GGGCCAGGCCATGTTAAAGCATTTACACATGTGCCT...CTCCTGCCTCAGGGCCTCTGTCCTTATTCTTCCTCTTCCCAGGGGTGTGCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR-3UTR GCA 90 bp ACCAGCACACCCCTGGGAAGAGGAAGAATAAGGACAGAGGCCCTGAGGCAGGAGCTGACTACTTCTGTCTaGCAATGGGAAATGGGCTGT +
Preference number: 2 (lower is better)
Translates to: TSTPLGRGRIRTEALRQELTTSV*QWEMGC
Trigger: ACAGCCCATTTCCCATTGGCAGACAGAAGTAGTCAG...CTCCTGCCTCAGGGCCTCTGTCCTTATTCTTCCTCTTCCCAGGGGTGTGCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR-3UTR TCA 90 bp TTGAGGAGAGACCTGCAGGAAGTGAGCCAGCCAGCCATGAGGTTGTGTATGGACAACAAGTGGGAACGCTaGGGAGAAACACTTAGCCCA +
Preference number: 2 (lower is better)
Translates to: LRRDLQEVSQPAMRLCMDNKWER*GETLSP
Trigger: TGGGCTAAGTGTTTCTCCTCAGCGTTCCCACTTGTT...GTCCATACACAACCTCATGGCTGGCTGGCTCACTTCCTGCAGGTCTCTCCTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR-3UTR GCA 90 bp ACCAGCACACCCCTGGGAAGAGGAAGAATAAGGACAGAGGCCCTGAGGCAGGAGGGCATTTTTCAGTGCTaGTGTATCAGGCATTGTGTC +
Preference number: 2 (lower is better)
Translates to: TSTPLGRGRIRTEALRQEGIFQC*CIRHCV
Trigger: GACACAATGCCTGATACAGCAGCACTGAAAAATGCC...CTCCTGCCTCAGGGCCTCTGTCCTTATTCTTCCTCTTCCCAGGGGTGTGCTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR-3UTR TCA 90 bp ACCAGCACACCCCTGGGAAGAGGAAGAATAAGGACAGAGGCCCTGAGGCAGGAGATAATGTTTCTAGGTTaGTCACCCATCACAGTGGGT +
Preference number: 2 (lower is better)
Translates to: TSTPLGRGRIRTEALRQEIMFLG*SPITVG
Trigger: ACCCACTGTGATGGGTGATCAACCTAGAAACATTAT...CTCCTGCCTCAGGGCCTCTGTCCTTATTCTTCCTCTTCCCAGGGGTGTGCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR-3UTR TCA 90 bp TTGAGGAGAGACCTGCAGGAAGTGAGCCAGCCAGCCATGAGGTTGTGTATGGACTTGTGTGTGTGCACATaGATTTTGGGGGTAGAAGCG +
Preference number: 2 (lower is better)
Translates to: LRRDLQEVSQPAMRLCMDLCVCT*ILGVEA
Trigger: CGCTTCTACCCCCAAAATTCATGTGCACACACACAA...GTCCATACACAACCTCATGGCTGGCTGGCTCACTTCCTGCAGGTCTCTCCTCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR-3UTR CCA 90 bp ACCAGCACACCCCTGGGAAGAGGAAGAATAAGGACAGAGGCCCTGAGGCAGGAGTTGGTCTACGTGAAATaGGGGCCATTGAAAGGTTTT +
Preference number: 2 (lower is better)
Translates to: TSTPLGRGRIRTEALRQELVYVK*GPLKGF
Trigger: AAAACCTTTCAATGGCCCCCATTTCACGTAGACCAA...CTCCTGCCTCAGGGCCTCTGTCCTTATTCTTCCTCTTCCCAGGGGTGTGCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR-3UTR CCA 90 bp TGTCCTGCTATGCCACCTGAGCCTGGAATGATGTTGATGACCCCCTTTGGAAAGGGCACAGACACCGAGTaGCTCTTTCTTGGTGAAGGT +
Preference number: 2 (lower is better)
Translates to: CPAMPPEPGMMLMTPFGKGTDTE*LFLGEG
Trigger: ACCTTCACCAAGAAAGAGCCACTCGGTGTCTGTGCC...CTTTCCAAAGGGGGTCATCAACATCATTCCAGGCTCAGGTGGCATAGCAGGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552270.1
3UTR-3UTR TCA 90 bp AGACCAGTTGGGAGACTTGAGCAAAATTGTAGGAAAGAGGTAACAGGCCAGGTGGCAGGCTGGGGAGGGTaGTGTTCCAATTCCAGTTCA +
Preference number: 2 (lower is better)
Translates to: RPVGRLEQNCRKEVTGQVAGWGG*CSNSSS
Trigger: TGAACTGGAATTGGAACATCACCCTCCCCAGCCTGC...CACCTGGCCTGTTACCTCTTTCCTACAATTTTGCTCAAGTCTCCCAACTGGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR-3UTR CCA 90 bp TTGAGGAGAGACCTGCAGGAAGTGAGCCAGCCAGCCATGAGGTTGTGTATGGACGTAAATGCTTTAACATaGCCTGGCCCTCTTCATGGT +
Preference number: 2 (lower is better)
Translates to: LRRDLQEVSQPAMRLCMDVNALT*PGPLHG
Trigger: ACCATGAAGAGGGCCAGGCCATGTTAAAGCATTTAC...GTCCATACACAACCTCATGGCTGGCTGGCTCACTTCCTGCAGGTCTCTCCTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR-3UTR TCA 90 bp TTGAGGAGAGACCTGCAGGAAGTGAGCCAGCCAGCCATGAGGTTGTGTATGGACATAACTGCATGGTACTaGCATCTTCAAGATGGGAAC +
Preference number: 2 (lower is better)
Translates to: LRRDLQEVSQPAMRLCMDITAWY*HLQDGN
Trigger: GTTCCCATCTTGAAGATGTCAGTACCATGCAGTTAT...GTCCATACACAACCTCATGGCTGGCTGGCTCACTTCCTGCAGGTCTCTCCTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR-3UTR TCA 90 bp TTGAGGAGAGACCTGCAGGAAGTGAGCCAGCCAGCCATGAGGTTGTGTATGGACATAATGTTTCTAGGTTaGTCACCCATCACAGTGGGT +
Preference number: 2 (lower is better)
Translates to: LRRDLQEVSQPAMRLCMDIMFLG*SPITVG
Trigger: ACCCACTGTGATGGGTGATCAACCTAGAAACATTAT...GTCCATACACAACCTCATGGCTGGCTGGCTCACTTCCTGCAGGTCTCTCCTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR-3UTR TCA 90 bp ACCAGCACACCCCTGGGAAGAGGAAGAATAAGGACAGAGGCCCTGAGGCAGGAGATATCGTATTATTATTaGCAGAAGGCCCATACTGGA +
Preference number: 2 (lower is better)
Translates to: TSTPLGRGRIRTEALRQEISYYY*QKAHTG
Trigger: TCCAGTATGGGCCTTCTGTCAATAATAATACGATAT...CTCCTGCCTCAGGGCCTCTGTCCTTATTCTTCCTCTTCCCAGGGGTGTGCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR CAA 90 bp GATTCTTCCACGAACAACCGCCCAGCAGCAATACAGTTCTCTCCTTaGTTGAAAAATACTGCTCCCATGCCCATTCGCACAGCCTTGTCA +
Preference number: 2 (lower is better)
Translates to: DSSTNNRPAAIQFSP*LKNTAPMPIRTALS
Trigger: TGACAAGGCTGTGCGAATGGGCATGGGAGCAGTATTTTTCAACAAAGGAGAGAACTGTATTGCTGCTGGGCGGTTGTTCGTGGAAGAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552270.1
3UTR-3UTR TCA 90 bp AGACCAGTTGGGAGACTTGAGCAAAATTGTAGGAAAGAGGTAACAGGCCAGGTGTTTTTGGTTTGTGGCTaGCACCTCCTGCCTCAACAC +
Preference number: 2 (lower is better)
Translates to: RPVGRLEQNCRKEVTGQVFLVCG*HLLPQH
Trigger: GTGTTGAGGCAGGAGGTGTCAGCCACAAACCAAAAA...CACCTGGCCTGTTACCTCTTTCCTACAATTTTGCTCAAGTCTCCCAACTGGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR-3UTR TCA 90 bp TTGAGGAGAGACCTGCAGGAAGTGAGCCAGCCAGCCATGAGGTTGTGTATGGACCTAGGAATTGATGATTaGAAAGGGTTGTGGGAAATG +
Preference number: 2 (lower is better)
Translates to: LRRDLQEVSQPAMRLCMDLGIDD*KGLWEM
Trigger: CATTTCCCACAACCCTTTTCAATCATCAATTCCTAG...GTCCATACACAACCTCATGGCTGGCTGGCTCACTTCCTGCAGGTCTCTCCTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR-3UTR TCA 90 bp GATCTGTTTGCCAATAGGAGTGGATCCAGTGAAACCAAGTTTGCGGATGTCAGGACCAGCTCCACCTCTTaGTCTTCTCCTCTCAGTTTC +
Preference number: 2 (lower is better)
Translates to: DLFANRSGSSETKFADVRTSSTS*SSPLSF
Trigger: GAAACTGAGAGGAGAAGATCAAGAGGTGGAGCTGGT...CCTGACATCCGCAAACTTGGTTTCACTGGATCCACTCCTATTGGCAAACAGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552270.1
3UTR-3UTR GCA 90 bp ACCAGCACACCCCTGGGAAGAGGAAGAATAAGGACAGAGGCCCTGAGGCAGGAGCTTGTGTATTATAACTaGATGGTACTGACATCTTCA +
Preference number: 2 (lower is better)
Translates to: TSTPLGRGRIRTEALRQELVYYN*MVLTSS
Trigger: TGAAGATGTCAGTACCATGCAGTTATAATACACAAG...CTCCTGCCTCAGGGCCTCTGTCCTTATTCTTCCTCTTCCCAGGGGTGTGCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR-3UTR GCA 90 bp TTGAGGAGAGACCTGCAGGAAGTGAGCCAGCCAGCCATGAGGTTGTGTATGGACTGTGATTCAGAAATTTaGCGCCTTCTAGTCACACAT +
Preference number: 2 (lower is better)
Translates to: LRRDLQEVSQPAMRLCMDCDSEI*RLLVTH
Trigger: ATGTGTGACTAGAAGGCGGCAAATTTCTGAATCACA...GTCCATACACAACCTCATGGCTGGCTGGCTCACTTCCTGCAGGTCTCTCCTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR-3UTR CCA 90 bp TGTCCTGCTATGCCACCTGAGCCTGGAATGATGTTGATGACCCCCTTTGGAAAGACGGGCCTGGTTGATTaGAATAGTAGAACCCTGAAT +
Preference number: 2 (lower is better)
Translates to: CPAMPPEPGMMLMTPFGKTGLVD*NSRTLN
Trigger: ATTCAGGGTTCTACTATTCCAATCAACCAGGCCCGT...CTTTCCAAAGGGGGTCATCAACATCATTCCAGGCTCAGGTGGCATAGCAGGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552270.1
3UTR-3UTR TCA 90 bp TTGAGGAGAGACCTGCAGGAAGTGAGCCAGCCAGCCATGAGGTTGTGTATGGACACTCAACCTAGGCTCTaGGATATTAGATTACTATCT +
Preference number: 2 (lower is better)
Translates to: LRRDLQEVSQPAMRLCMDTQPRL*DIRLLS
Trigger: AGATAGTAATCTAATATCTCAGAGCCTAGGTTGAGT...GTCCATACACAACCTCATGGCTGGCTGGCTCACTTCCTGCAGGTCTCTCCTCAA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR-3UTR TCA 90 bp TTGAGGAGAGACCTGCAGGAAGTGAGCCAGCCAGCCATGAGGTTGTGTATGGACACACTGCTACTGAGATaGATATTAGAGGGTAAAGTA +
Preference number: 2 (lower is better)
Translates to: LRRDLQEVSQPAMRLCMDTLLLR*ILEGKV
Trigger: TACTTTACCCTCTAATATTCATCTCAGTAGCAGTGT...GTCCATACACAACCTCATGGCTGGCTGGCTCACTTCCTGCAGGTCTCTCCTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR-3UTR TCA 90 bp TGTTTGCCAATAGGAGTGGATCCAGTGAAACCAAGTTTGCGGATGTCAGGATGTCACCACATTTCTGTCTaGTCTCTTCAACCAGCCTGG +
Preference number: 2 (lower is better)
Translates to: CLPIGVDPVKPSLRMSGCHHISV*SLQPAW
Trigger: CCAGGCTGGTTGAAGAGATCAGACAGAAATGTGGTG...ACATCCTGACATCCGCAAACTTGGTTTCACTGGATCCACTCCTATTGGCAAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552270.1
3UTR-3UTR TCA 90 bp GATCTGTTTGCCAATAGGAGTGGATCCAGTGAAACCAAGTTTGCGGATGTCAGGGTGGCTCTTTCTTGGTaGAGGTCAGATTGCGATTTG +
Preference number: 2 (lower is better)
Translates to: DLFANRSGSSETKFADVRVALSW*RSDCDL
Trigger: CAAATCGCAATCTGACCTTCACCAAGAAAGAGCCAC...CCTGACATCCGCAAACTTGGTTTCACTGGATCCACTCCTATTGGCAAACAGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552270.1
3UTR-3UTR GCA 90 bp TGGCTTGCATTTGTTCTGATGGCATGCATCTCTTCCCAAACTCTGTATTCAGTGGTGGCTGACACCTCCTaGCTCAACACACCCAATCTT +
Preference number: 2 (lower is better)
Translates to: WLAFVLMACISSQTLYSVVADTS*LNTPNL
Trigger: AAGATTGGGTGTGTTGAGGCAGGAGGTGTCAGCCAC...CACTGAATACAGAGTTTGGGAAGAGATGCATGCCATCAGAACAAATGCAAGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR-3UTR GCA 90 bp ACTTGCAGAATTGTGTGTGTGCACATGAATTTTGGGGGTAGAAGCGGGACACAGAGGCACATGTGTAAATaGTTTAACATGGCCTGGCCC +
Preference number: 2 (lower is better)
Translates to: TCRIVCVHMNFGGRSGTQRHMCK*FNMAWP
Trigger: GGGCCAGGCCATGTTAAAGCATTTACACATGTGCCT...CTGTGTCCCGCTTCTACCCCCAAAATTCATGTGCACACACACAATTCTGCAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR-3UTR GCA 90 bp ACTTGCAGAATTGTGTGTGTGCACATGAATTTTGGGGGTAGAAGCGGGACACAGGAGGCTCAGAGGAGTTaGGAGAGTTTCCCAAAGTTA +
Preference number: 2 (lower is better)
Translates to: TCRIVCVHMNFGGRSGTQEAQRS*ESFPKL
Trigger: TAACTTTGGGAAACTCTCGCAACTCCTCTGAGCCTC...CTGTGTCCCGCTTCTACCCCCAAAATTCATGTGCACACACACAATTCTGCAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR-3UTR GCA 90 bp AGACCAGTTGGGAGACTTGAGCAAAATTGTAGGAAAGAGGTAACAGGCCAGGTGGAGGCTCAGAGGAGTTaGGAGAGTTTCCCAAAGTTA +
Preference number: 2 (lower is better)
Translates to: RPVGRLEQNCRKEVTGQVEAQRS*ESFPKL
Trigger: TAACTTTGGGAAACTCTCGCAACTCCTCTGAGCCTC...CACCTGGCCTGTTACCTCTTTCCTACAATTTTGCTCAAGTCTCCCAACTGGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR-3UTR GCA 90 bp CCTGCTATGCCACCTGAGCCTGGAATGATGTTGATGACCCCCTTTGGAAAGCCTTTTCCATCTTCAAACTaGAGATTTCTCACCGTCAGT +
Preference number: 2 (lower is better)
Translates to: PAMPPEPGMMLMTPFGKPFPSSN*RFLTVS
Trigger: ACTGACGGTGAGAAATCTGCAGTTTGAAGATGGAAA...AGGCTTTCCAAAGGGGGTCATCAACATCATTCCAGGCTCAGGTGGCATAGCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552270.1
3UTR-3UTR CCA 90 bp TTGAGGAGAGACCTGCAGGAAGTGAGCCAGCCAGCCATGAGGTTGTGTATGGACATTTCTTCAATGCTATaGTCCAAACGCCTTGTTAAG +
Preference number: 2 (lower is better)
Translates to: LRRDLQEVSQPAMRLCMDISSML*SKRLVK
Trigger: CTTAACAAGGCGTTTGGACCATAGCATTGAAGAAAT...GTCCATACACAACCTCATGGCTGGCTGGCTCACTTCCTGCAGGTCTCTCCTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR-3UTR CCA 90 bp ACCTTGATGGTCTCTGCCACTTTCACCTCTTCAGCTGTCAGTTCTACCACTGACAAAACTTCGGCAGACTaGTCCCAAGAAATCTCAGCA +
Preference number: 2 (lower is better)
Translates to: TLMVSATFTSSAVSSTTDKTSAD*SQEISA
Trigger: TGCTGAGATTTCTTGGGACCAGTCTGCCGAAGTTTT...GTCAGTGGTAGAACTGACAGCTGAAGAGGTGAAAGTGGCAGAGACCATCAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552270.1
3UTR-3UTR CCA 90 bp GATCTGTTTGCCAATAGGAGTGGATCCAGTGAAACCAAGTTTGCGGATGTCAGGTCTCTTCAACCAGCCTaGCAACATCCATTGAGCTTG +
Preference number: 2 (lower is better)
Translates to: DLFANRSGSSETKFADVRSLQPA*QHPLSL
Trigger: CAAGCTCAATGGATGTTGCCAGGCTGGTTGAAGAGA...CCTGACATCCGCAAACTTGGTTTCACTGGATCCACTCCTATTGGCAAACAGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552270.1
3UTR-3UTR CCA 90 bp AAAAATACTGCTCCCATGCCCATTCGCACAGCCTTGTCAAGTTCACAGTCATTAGGTCAGATTGCGATTTaGACGGGCCTGGTTGATTGG +
Preference number: 2 (lower is better)
Translates to: KNTAPMPIRTALSSSQSLGQIAI*TGLVDW
Trigger: CCAATCAACCAGGCCCGTCCAAATCGCAATCTGACC...TAATGACTGTGAACTTGACAAGGCTGTGCGAATGGGCATGGGAGCAGTATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552270.1
3UTR CAA 90 bp TTCATGATCTGTTTGCCAATAGGAGTGGATCCAGTGAAACCAAGTTaGCGGATGTCAGGATGTTCAGACAGACGTTGTCCTGCTATGCCA +
Preference number: 2 (lower is better)
Translates to: FMICLPIGVDPVKPS*RMSGCSDRRCPAMP
Trigger: TGGCATAGCAGGACAACGTCTGTCTGAACATCCTGACATCCGCAAACTTGGTTTCACTGGATCCACTCCTATTGGCAAACAGATCATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552270.1
3UTR-3UTR TCA 90 bp TTTAAACAGACGAGTGAAGTGACACTGTCTGACTTAAGCTTTGAACAGGACCGCAACAAGTGGGAACGCTaGGGAGAAACACTTAGCCCA +
Preference number: 2 (lower is better)
Translates to: FKQTSEVTLSDLSFEQDRNKWER*GETLSP
Trigger: TGGGCTAAGTGTTTCTCCTCAGCGTTCCCACTTGTT...GCGGTCCTGTTCAAAGCTTAAGTCAGACAGTGTCACTTCACTCGTCTGTTTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR-3UTR TCA 90 bp AAAAATACTGCTCCCATGCCCATTCGCACAGCCTTGTCAAGTTCACAGTCATTATCCTGCTATGCCACCTaGGCCTGGAATGATGTTGAT +
Preference number: 2 (lower is better)
Translates to: KNTAPMPIRTALSSSQSLSCYAT*AWNDVD
Trigger: ATCAACATCATTCCAGGCTCAGGTGGCATAGCAGGA...TAATGACTGTGAACTTGACAAGGCTGTGCGAATGGGCATGGGAGCAGTATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552270.1
3UTR-3UTR GCA 90 bp AGACCAGTTGGGAGACTTGAGCAAAATTGTAGGAAAGAGGTAACAGGCCAGGTGGAAGGAAAGTGGAACTaGTTAAAGTGTCCACACCTC +
Preference number: 2 (lower is better)
Translates to: RPVGRLEQNCRKEVTGQVEGKWN*LKCPHL
Trigger: GAGGTGTGGACACTTTAAGCAGTTCCACTTTCCTTC...CACCTGGCCTGTTACCTCTTTCCTACAATTTTGCTCAAGTCTCCCAACTGGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR-3UTR GCA 90 bp CCTGCTATGCCACCTGAGCCTGGAATGATGTTGATGACCCCCTTTGGAAAGCCTTTTCACAGACAGTTCTaGAAACTTCAAAGCAGTCAA +
Preference number: 2 (lower is better)
Translates to: PAMPPEPGMMLMTPFGKPFHRQF*KLQSSQ
Trigger: TTGACTGCTTTGAAGTTTGCAGAACTGTCTGTGAAA...AGGCTTTCCAAAGGGGGTCATCAACATCATTCCAGGCTCAGGTGGCATAGCAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552270.1
3UTR-3UTR CCA 90 bp AGACCAGTTGGGAGACTTGAGCAAAATTGTAGGAAAGAGGTAACAGGCCAGGTGGTAAATGCTTTAACATaGCCTGGCCCTCTTCATGGT +
Preference number: 2 (lower is better)
Translates to: RPVGRLEQNCRKEVTGQVVNALT*PGPLHG
Trigger: ACCATGAAGAGGGCCAGGCCATGTTAAAGCATTTAC...CACCTGGCCTGTTACCTCTTTCCTACAATTTTGCTCAAGTCTCCCAACTGGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR-3UTR CCA 90 bp TTGAGGAGAGACCTGCAGGAAGTGAGCCAGCCAGCCATGAGGTTGTGTATGGACAGGGGAGAAACAGCTTaGTATTTTAGAAATACGTAT +
Preference number: 2 (lower is better)
Translates to: LRRDLQEVSQPAMRLCMDRGETA*YFRNTY
Trigger: ATACGTATTTCTAAAATACCAAGCTGTTTCTCCCCT...GTCCATACACAACCTCATGGCTGGCTGGCTCACTTCCTGCAGGTCTCTCCTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR-3UTR CCA 90 bp TGTCCTGCTATGCCACCTGAGCCTGGAATGATGTTGATGACCCCCTTTGGAAAGAGCCTTCAAACTTGGTaGCCATATAGACATCTTCAT +
Preference number: 2 (lower is better)
Translates to: CPAMPPEPGMMLMTPFGKSLQTW*PYRHLH
Trigger: ATGAAGATGTCTATATGGCCACCAAGTTTGAAGGCT...CTTTCCAAAGGGGGTCATCAACATCATTCCAGGCTCAGGTGGCATAGCAGGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552270.1
3UTR-3UTR CCA 90 bp TGTTTGCCAATAGGAGTGGATCCAGTGAAACCAAGTTTGCGGATGTCAGGATGTGTTGATGACCCCCTTTaGAAAGCCTGCTTTCACAGA +
Preference number: 2 (lower is better)
Translates to: CLPIGVDPVKPSLRMSGCVDDPL*KACFHR
Trigger: TCTGTGAAAGCAGGCTTTCCAAAGGGGGTCATCAAC...ACATCCTGACATCCGCAAACTTGGTTTCACTGGATCCACTCCTATTGGCAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552270.1
3UTR CAA 90 bp CTTTCACCTCTTCAGCTGTCAGTTCTACCACTGACGTCTCACCCGTaGAAAAGTACTGAGAGGCAGGGATCATTTTTCCATCTTCAAACT +
Preference number: 2 (lower is better)
Translates to: LSPLQLSVLPLTSHP*KSTERQGSFFHLQT
Trigger: AGTTTGAAGATGGAAAAATGATCCCTGCCTCTCAGTACTTTTCAACGGGTGAGACGTCAGTGGTAGAACTGACAGCTGAAGAGGTGAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552270.1
3UTR-3UTR TCA 90 bp TGGCTTGCATTTGTTCTGATGGCATGCATCTCTTCCCAAACTCTGTATTCAGTGAGATCACACAGCCAGTaGACAGCAGAACCAATAGGT +
Preference number: 2 (lower is better)
Translates to: WLAFVLMACISSQTLYSVRSHSQ*TAEPIG
Trigger: ACCTATTGGTTCTGCTGTTCACTGGCTGTGTGATCT...CACTGAATACAGAGTTTGGGAAGAGATGCATGCCATCAGAACAAATGCAAGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR-3UTR GCA 90 bp TGGCTTGCATTTGTTCTGATGGCATGCATCTCTTCCCAAACTCTGTATTCAGTGCTGACTACTTCTGTCTaGCAATGGGAAATGGGCTGT +
Preference number: 2 (lower is better)
Translates to: WLAFVLMACISSQTLYSVLTTSV*QWEMGC
Trigger: ACAGCCCATTTCCCATTGGCAGACAGAAGTAGTCAG...CACTGAATACAGAGTTTGGGAAGAGATGCATGCCATCAGAACAAATGCAAGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR-3UTR GCA 90 bp TCAATAATGGGGACATTGCTTAAAATTCCAGCCCAGATGACCTTGATGGTCTCTGATACCTTCATATGTTaGCCCTTCTTCTGGCTGGGG +
Preference number: 2 (lower is better)
Translates to: SIMGTLLKIPAQMTLMVSDTFIC*PFFWLG
Trigger: CCCCAGCCAGAAGAAGGGGCAACATATGAAGGTATC...AGAGACCATCAAGGTCATCTGGGCTGGAATTTTAAGCAATGTCCCCATTATTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552270.1
3UTR-3UTR CCA 90 bp TTTAAACAGACGAGTGAAGTGACACTGTCTGACTTAAGCTTTGAACAGGACCGCGCAAAGGCATGGGGATaGGGAATTAGAAGGAAAGTG +
Preference number: 2 (lower is better)
Translates to: FKQTSEVTLSDLSFEQDRAKAWG*GIRRKV
Trigger: CACTTTCCTTCTAATTCCCCATCCCCATGCCTTTGC...GCGGTCCTGTTCAAAGCTTAAGTCAGACAGTGTCACTTCACTCGTCTGTTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR-3UTR CCA 90 bp ACATACATAGCTTTGTTTATGTCTCTTGTAAAAACCCCTGAGGCCAAACCATACTGTTGCCCCTTCTTCTaGCTGGGGTATACGAGGAGC +
Preference number: 2 (lower is better)
Translates to: TYIALFMSLVKTPEAKPYCCPFF*LGYTRS
Trigger: GCTCCTCGTATACCCCAGCCAGAAGAAGGGGCAACA...GTATGGTTTGGCCTCAGGGGTTTTTACAAGAGACATAAACAAAGCTATGTATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000552270.1
3UTR CAA 90 bp AGTTTCACAGTATTGCAGCAGCTTTTCCAGATGAGCCTTATGATTTaGGGGCCCATGATCAGTGGATCACTCTTGTCACAAATTCGTCGT +
Preference number: 2 (lower is better)
Translates to: SFTVLQQLFQMSLMI*GPMISGSLLSQIRR
Trigger: ACGACGAATTTGTGACAAGAGTGATCCACTGATCATGGGCCCCAAAATCATAAGGCTCATCTGGAAAAGCTGCTGCAATACTGTGAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552270.1
3UTR-3UTR TCA 90 bp ACTTGCAGAATTGTGTGTGTGCACATGAATTTTGGGGGTAGAAGCGGGACACAGCTAGGAATTGATGATTaGAAAGGGTTGTGGGAAATG +
Preference number: 2 (lower is better)
Translates to: TCRIVCVHMNFGGRSGTQLGIDD*KGLWEM
Trigger: CATTTCCCACAACCCTTTTCAATCATCAATTCCTAG...CTGTGTCCCGCTTCTACCCCCAAAATTCATGTGCACACACACAATTCTGCAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR-3UTR TCA 90 bp TGCTTAAAGTGTCCACACCTCCCGATTCAGGTGATAATAAGATCACAGCTTCATAGATCACACAGCCAGTaGACAGCAGAACCAATAGGT +
Preference number: 2 (lower is better)
Translates to: CLKCPHLPIQVIIRSQLHRSHSQ*TAEPIG
Trigger: ACCTATTGGTTCTGCTGTTCACTGGCTGTGTGATCT...ATGAAGCTGTGATCTTATTATCACCTGAATCGGGAGGTGTGGACACTTTAAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR-3UTR TCA 90 bp AAAAATACTGCTCCCATGCCCATTCGCACAGCCTTGTCAAGTTCACAGTCATTACCAGGGACTTTATCATaGCCTCGAATCCAGTTATGT +
Preference number: 2 (lower is better)
Translates to: KNTAPMPIRTALSSSQSLPGTLS*PRIQLC
Trigger: ACATAACTGGATTCGAGGTCATGATAAAGTCCCTGG...TAATGACTGTGAACTTGACAAGGCTGTGCGAATGGGCATGGGAGCAGTATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552270.1
3UTR-3UTR GCA 90 bp TGTTTGCCAATAGGAGTGGATCCAGTGAAACCAAGTTTGCGGATGTCAGGATGTTTTTGCTGCTGCTACTaGTTTATCAACATCCGCCAA +
Preference number: 2 (lower is better)
Translates to: CLPIGVDPVKPSLRMSGCFCCCY*FINIRQ
Trigger: TTGGCGGATGTTGATAAAGCAGTAGCAGCAGCAAAA...ACATCCTGACATCCGCAAACTTGGTTTCACTGGATCCACTCCTATTGGCAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552270.1
3UTR-3UTR CCA 90 bp CTTTTGGATAAAGCCTTCAAACTTGGTGGCCATATAGACATCTTCATTCTGCAAGCCCCTTCTTCTGGCTaGGGTATACGAGGAGCTTTT +
Preference number: 2 (lower is better)
Translates to: LLDKAFKLGGHIDIFILQAPSSG*GIRGAF
Trigger: AAAAGCTCCTCGTATACCCCAGCCAGAAGAAGGGGC...TTGCAGAATGAAGATGTCTATATGGCCACCAAGTTTGAAGGCTTTATCCAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552270.1
3UTR-3UTR CCA 90 bp ACCTTGATGGTCTCTGCCACTTTCACCTCTTCAGCTGTCAGTTCTACCACTGACGCATTTTCCTTTTTCTaGATACCTTCATATGTTGCC +
Preference number: 2 (lower is better)
Translates to: TLMVSATFTSSAVSSTTDAFSFF*IPSYVA
Trigger: GGCAACATATGAAGGTATCCAGAAAAAGGAAAATGC...GTCAGTGGTAGAACTGACAGCTGAAGAGGTGAAAGTGGCAGAGACCATCAAGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552270.1
3UTR-3UTR TCA 90 bp TGGCTTGCATTTGTTCTGATGGCATGCATCTCTTCCCAAACTCTGTATTCAGTGTTTTGGAGACTCATGTaGTTCAGAAATTTGCCGCCT +
Preference number: 2 (lower is better)
Translates to: WLAFVLMACISSQTLYSVFWRLM*FRNLPP
Trigger: AGGCGGCAAATTTCTGAATCACATGAGTCTCCAAAA...CACTGAATACAGAGTTTGGGAAGAGATGCATGCCATCAGAACAAATGCAAGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR-3UTR TCA 90 bp TGGCTTGCATTTGTTCTGATGGCATGCATCTCTTCCCAAACTCTGTATTCAGTGGCCAAGTCTCCAAAATaGCAAATATTCCCTAAGGCT +
Preference number: 2 (lower is better)
Translates to: WLAFVLMACISSQTLYSVAKSPK*QIFPKA
Trigger: AGCCTTAGGGAATATTTGTCATTTTGGAGACTTGGC...CACTGAATACAGAGTTTGGGAAGAGATGCATGCCATCAGAACAAATGCAAGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR-3UTR GCA 90 bp TTTAAACAGACGAGTGAAGTGACACTGTCTGACTTAAGCTTTGAACAGGACCGCTGTGGCATTTTTCAGTaGTGCTGTATCAGGCATTGT +
Preference number: 2 (lower is better)
Translates to: FKQTSEVTLSDLSFEQDRCGIFQ*CCIRHC
Trigger: ACAATGCCTGATACAGCAGCACTGAAAAATGCCACA...GCGGTCCTGTTCAAAGCTTAAGTCAGACAGTGTCACTTCACTCGTCTGTTTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR-3UTR CCA 90 bp ACTTGCAGAATTGTGTGTGTGCACATGAATTTTGGGGGTAGAAGCGGGACACAGATTTCTTCAATGCTATaGTCCAAACGCCTTGTTAAG +
Preference number: 2 (lower is better)
Translates to: TCRIVCVHMNFGGRSGTQISSML*SKRLVK
Trigger: CTTAACAAGGCGTTTGGACCATAGCATTGAAGAAAT...CTGTGTCCCGCTTCTACCCCCAAAATTCATGTGCACACACACAATTCTGCAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR-3UTR CCA 90 bp AGACCAGTTGGGAGACTTGAGCAAAATTGTAGGAAAGAGGTAACAGGCCAGGTGGAATTAGAAGGAAAGTaGAACTGCTTAAAGTGTCCA +
Preference number: 2 (lower is better)
Translates to: RPVGRLEQNCRKEVTGQVELEGK*NCLKCP
Trigger: TGGACACTTTAAGCAGTTCCACTTTCCTTCTAATTC...CACCTGGCCTGTTACCTCTTTCCTACAATTTTGCTCAAGTCTCCCAACTGGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR-3UTR CCA 90 bp TGGAATTTAGAAATGACCATAATAGGCCCAAAGGATTCCTCTTTGGCGAGGTACACCTTTAATTTCCAGTaGTTCTCCAGGAGGCACAGA +
Preference number: 2 (lower is better)
Translates to: WNLEMTIIGPKDSSLARYTFNFQ*FSRRHR
Trigger: TCTGTGCCTCCTGGAGAACCACTGGAAATTAAAGGT...GTACCTCGCCAAAGAGGAATCCTTTGGGCCTATTATGGTCATTTCTAAATTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552270.1
3UTR-3UTR CCA 90 bp TGGAATTTAGAAATGACCATAATAGGCCCAAAGGATTCCTCTTTGGCGAGGTACCGATTTGGACGGGCCTaGTTGATTGGAATAGTAGAA +
Preference number: 2 (lower is better)
Translates to: WNLEMTIIGPKDSSLARYRFGRA*LIGIVE
Trigger: TTCTACTATTCCAATCAACCAGGCCCGTCCAAATCG...GTACCTCGCCAAAGAGGAATCCTTTGGGCCTATTATGGTCATTTCTAAATTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552270.1
3UTR-3UTR TCA 90 bp TGGCTTGCATTTGTTCTGATGGCATGCATCTCTTCCCAAACTCTGTATTCAGTGCCTTGCAACACCTACTaGGATAGAGATTTGATTTTC +
Preference number: 2 (lower is better)
Translates to: WLAFVLMACISSQTLYSVPCNTY*DRDLIF
Trigger: GAAAATCAAATCTCTATCTCAGTAGGTGTTGCAAGG...CACTGAATACAGAGTTTGGGAAGAGATGCATGCCATCAGAACAAATGCAAGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR-3UTR TCA 90 bp TTTAAACAGACGAGTGAAGTGACACTGTCTGACTTAAGCTTTGAACAGGACCGCGAAAATTTACTCACCTaGCTACTTCTGTCTGCCAAT +
Preference number: 2 (lower is better)
Translates to: FKQTSEVTLSDLSFEQDRENLLT*LLLSAN
Trigger: ATTGGCAGACAGAAGTAGTCAGGTGAGTAAATTTTC...GCGGTCCTGTTCAAAGCTTAAGTCAGACAGTGTCACTTCACTCGTCTGTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR-3UTR TCA 90 bp TGCTACTGCTTTATCAACATCCGCCAAAGAAGCGTAGGATACTTTGCATATTGTTCTTCATTCTGCAACTaGAGCCCACCACATTTCTGT +
Preference number: 2 (lower is better)
Translates to: CYCFINIRQRSVGYFAYCSSFCN*SPPHFC
Trigger: ACAGAAATGTGGTGGGCTTCAGTTGCAGAATGAAGA...ACAATATGCAAAGTATCCTACGCTTCTTTGGCGGATGTTGATAAAGCAGTAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552270.1
3UTR-3UTR GCA 90 bp AGACCAGTTGGGAGACTTGAGCAAAATTGTAGGAAAGAGGTAACAGGCCAGGTGTTTTCCTTGTACTATTaGCATTTTTCATTGTGTGGC +
Preference number: 2 (lower is better)
Translates to: RPVGRLEQNCRKEVTGQVFSLYY*HFSLCG
Trigger: GCCACACAATGAAAAATGGCAATAGTACAAGGAAAA...CACCTGGCCTGTTACCTCTTTCCTACAATTTTGCTCAAGTCTCCCAACTGGTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR-3UTR CCA 90 bp TGGCTTGCATTTGTTCTGATGGCATGCATCTCTTCCCAAACTCTGTATTCAGTGTCTGCCAATGGGAAATaGGCTGTTAATAGTTTCCAT +
Preference number: 2 (lower is better)
Translates to: WLAFVLMACISSQTLYSVSANGK*AVNSFH
Trigger: ATGGAAACTATTAACAGCCCATTTCCCATTGGCAGA...CACTGAATACAGAGTTTGGGAAGAGATGCATGCCATCAGAACAAATGCAAGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR-3UTR CCA 90 bp TGGCTTGCATTTGTTCTGATGGCATGCATCTCTTCCCAAACTCTGTATTCAGTGCTCTGTTTATCATGCTaGGATCAAACCTCCTATTCT +
Preference number: 2 (lower is better)
Translates to: WLAFVLMACISSQTLYSVLCLSC*DQTSYS
Trigger: AGAATAGGAGGTTTGATCCCAGCATGATAAACAGAG...CACTGAATACAGAGTTTGGGAAGAGATGCATGCCATCAGAACAAATGCAAGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR-3UTR TCA 90 bp TGGCTTGCATTTGTTCTGATGGCATGCATCTCTTCCCAAACTCTGTATTCAGTGCTTACATTACTGCAATaGATTCTCCTATTAAGGGTC +
Preference number: 2 (lower is better)
Translates to: WLAFVLMACISSQTLYSVLTLLQ*ILLLRV
Trigger: GACCCTTAATAGGAGAATTCATTGCAGTAATGTAAG...CACTGAATACAGAGTTTGGGAAGAGATGCATGCCATCAGAACAAATGCAAGCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR-3UTR TCA 90 bp TGGCTTGCATTTGTTCTGATGGCATGCATCTCTTCCCAAACTCTGTATTCAGTGACTCAACCTAGGCTCTaGGATATTAGATTACTATCT +
Preference number: 2 (lower is better)
Translates to: WLAFVLMACISSQTLYSVTQPRL*DIRLLS
Trigger: AGATAGTAATCTAATATCTCAGAGCCTAGGTTGAGT...CACTGAATACAGAGTTTGGGAAGAGATGCATGCCATCAGAACAAATGCAAGCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR-3UTR TCA 90 bp TGCTTAAAGTGTCCACACCTCCCGATTCAGGTGATAATAAGATCACAGCTTCATGAAAATTTACTCACCTaGCTACTTCTGTCTGCCAAT +
Preference number: 2 (lower is better)
Translates to: CLKCPHLPIQVIIRSQLHENLLT*LLLSAN
Trigger: ATTGGCAGACAGAAGTAGTCAGGTGAGTAAATTTTC...ATGAAGCTGTGATCTTATTATCACCTGAATCGGGAGGTGTGGACACTTTAAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR-3UTR TCA 90 bp TGCTTAAAGTGTCCACACCTCCCGATTCAGGTGATAATAAGATCACAGCTTCATGTCACACATAGATGGTaGAAATTTACTCACCTGACT +
Preference number: 2 (lower is better)
Translates to: CLKCPHLPIQVIIRSQLHVTHRW*KFTHLT
Trigger: AGTCAGGTGAGTAAATTTTCACCATCTATGTGTGAC...ATGAAGCTGTGATCTTATTATCACCTGAATCGGGAGGTGTGGACACTTTAAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR-3UTR TCA 90 bp TTTAAACAGACGAGTGAAGTGACACTGTCTGACTTAAGCTTTGAACAGGACCGCATATCGTATTATTATTaGCAGAAGGCCCATACTGGA +
Preference number: 2 (lower is better)
Translates to: FKQTSEVTLSDLSFEQDRISYYY*QKAHTG
Trigger: TCCAGTATGGGCCTTCTGTCAATAATAATACGATAT...GCGGTCCTGTTCAAAGCTTAAGTCAGACAGTGTCACTTCACTCGTCTGTTTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR-3UTR GCA 90 bp TGCTTAAAGTGTCCACACCTCCCGATTCAGGTGATAATAAGATCACAGCTTCATATTAGATTACTATCTTaGCCAAGATCACACAGCCAG +
Preference number: 2 (lower is better)
Translates to: CLKCPHLPIQVIIRSQLHIRLLS*PRSHSQ
Trigger: CTGGCTGTGTGATCTTGGGCAAGATAGTAATCTAAT...ATGAAGCTGTGATCTTATTATCACCTGAATCGGGAGGTGTGGACACTTTAAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR-3UTR GCA 90 bp TGCTTAAAGTGTCCACACCTCCCGATTCAGGTGATAATAAGATCACAGCTTCATTGTGATTCAGAAATTTaGCGCCTTCTAGTCACACAT +
Preference number: 2 (lower is better)
Translates to: CLKCPHLPIQVIIRSQLHCDSEI*RLLVTH
Trigger: ATGTGTGACTAGAAGGCGGCAAATTTCTGAATCACA...ATGAAGCTGTGATCTTATTATCACCTGAATCGGGAGGTGTGGACACTTTAAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR-3UTR GCA 90 bp TGCTACTGCTTTATCAACATCCGCCAAAGAAGCGTAGGATACTTTGCATATTGTAGTCTTTCCATCGTCTaGATCTGTGAACTGTCCATT +
Preference number: 2 (lower is better)
Translates to: CYCFINIRQRSVGYFAYCSLSIV*ICELSI
Trigger: AATGGACAGTTCACAGATGCAGACGATGGAAAGACT...ACAATATGCAAAGTATCCTACGCTTCTTTGGCGGATGTTGATAAAGCAGTAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552270.1
3UTR-3UTR CCA 90 bp TGTTGTTTAGTTTTTATTGATTCCCTACAATCCCCTCATGTTATTCTGCCAAGTTGCTTTAACATGGCCTaGCCCTCTTCATGGTCCATC +
Preference number: 2 (lower is better)
Translates to: CCLVFIDSLQSPHVILPSCFNMA*PSSWSI
Trigger: GATGGACCATGAAGAGGGCCAGGCCATGTTAAAGCA...ACTTGGCAGAATAACATGAGGGGATTGTAGGGAATCAATAAAAACTAAACAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR-3UTR CCA 90 bp TGCTTAAAGTGTCCACACCTCCCGATTCAGGTGATAATAAGATCACAGCTTCATCTCTGTTTATCATGCTaGGATCAAACCTCCTATTCT +
Preference number: 2 (lower is better)
Translates to: CLKCPHLPIQVIIRSQLHLCLSC*DQTSYS
Trigger: AGAATAGGAGGTTTGATCCCAGCATGATAAACAGAG...ATGAAGCTGTGATCTTATTATCACCTGAATCGGGAGGTGTGGACACTTTAAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR CAA 90 bp ACAGCCTTGTCAAGTTCACAGTCATTAAATATTATAAGTGGAGACTaGCCACCAAGCTCAAGGGAAACTTTCTTCAAGTTGCTAACAGCA +
Preference number: 2 (lower is better)
Translates to: TALSSSQSLNIISGD*PPSSRETFFKLLTA
Trigger: TGCTGTTAGCAACTTGAAGAAAGTTTCCCTTGAGCTTGGTGGCAAGTCTCCACTTATAATATTTAATGACTGTGAACTTGACAAGGCTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552270.1
3UTR-3UTR TCA 90 bp ATTCTGCCAAGTCTCCAAAATGACAAATATTCCCTAAGGCTTCTTCAAAGCCAAATAACTGCATGGTACTaGCATCTTCAAGATGGGAAC +
Preference number: 2 (lower is better)
Translates to: ILPSLQNDKYSLRLLQSQITAWY*HLQDGN
Trigger: GTTCCCATCTTGAAGATGTCAGTACCATGCAGTTAT...TTGGCTTTGAAGAAGCCTTAGGGAATATTTGTCATTTTGGAGACTTGGCAGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR-3UTR TCA 90 bp TGCTTAAAGTGTCCACACCTCCCGATTCAGGTGATAATAAGATCACAGCTTCATCTTACATTACTGCAATaGATTCTCCTATTAAGGGTC +
Preference number: 2 (lower is better)
Translates to: CLKCPHLPIQVIIRSQLHLTLLQ*ILLLRV
Trigger: GACCCTTAATAGGAGAATTCATTGCAGTAATGTAAG...ATGAAGCTGTGATCTTATTATCACCTGAATCGGGAGGTGTGGACACTTTAAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR-3UTR TCA 90 bp ATTCTGCCAAGTCTCCAAAATGACAAATATTCCCTAAGGCTTCTTCAAAGCCAATTTTGGAGACTCATGTaGTTCAGAAATTTGCCGCCT +
Preference number: 2 (lower is better)
Translates to: ILPSLQNDKYSLRLLQSQFWRLM*FRNLPP
Trigger: AGGCGGCAAATTTCTGAATCACATGAGTCTCCAAAA...TTGGCTTTGAAGAAGCCTTAGGGAATATTTGTCATTTTGGAGACTTGGCAGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR-3UTR TCA 90 bp GTCCCCATTTTGGAATTTAGAAATGACCATAATAGGCCCAAAGGATTCCTCTTTTCGAGCCATAGAAAGTaGCCATCTGTCCATTTATCT +
Preference number: 2 (lower is better)
Translates to: VPILEFRNDHNRPKGFLFSSHRK*PSVHLS
Trigger: AGATAAATGGACAGATGGTCACTTTCTATGGCTCGA...AAAGAGGAATCCTTTGGGCCTATTATGGTCATTTCTAAATTCCAAAATGGGGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000552270.1
3UTR-3UTR GCA 90 bp ATTCTGCCAAGTCTCCAAAATGACAAATATTCCCTAAGGCTTCTTCAAAGCCAAATTAGATTACTATCTTaGCCAAGATCACACAGCCAG +
Preference number: 2 (lower is better)
Translates to: ILPSLQNDKYSLRLLQSQIRLLS*PRSHSQ
Trigger: CTGGCTGTGTGATCTTGGGCAAGATAGTAATCTAAT...TTGGCTTTGAAGAAGCCTTAGGGAATATTTGTCATTTTGGAGACTTGGCAGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR-3UTR CCA 90 bp ATTCTGCCAAGTCTCCAAAATGACAAATATTCCCTAAGGCTTCTTCAAAGCCAATCTGCCAATGGGAAATaGGCTGTTAATAGTTTCCAT +
Preference number: 2 (lower is better)
Translates to: ILPSLQNDKYSLRLLQSQSANGK*AVNSFH
Trigger: ATGGAAACTATTAACAGCCCATTTCCCATTGGCAGA...TTGGCTTTGAAGAAGCCTTAGGGAATATTTGTCATTTTGGAGACTTGGCAGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR-3UTR CCA 90 bp ACATACATAGCTTTGTTTATGTCTCTTGTAAAAACCCCTGAGGCCAAACCATACTGTAGATCCATCTGTTaGGTTGATAGTGTCGTAAGT +
Preference number: 2 (lower is better)
Translates to: TYIALFMSLVKTPEAKPYCRSIC*VDSVVS
Trigger: ACTTACGACACTATCAACCCAACAGATGGATCTACA...GTATGGTTTGGCCTCAGGGGTTTTTACAAGAGACATAAACAAAGCTATGTATGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552270.1
3UTR-3UTR TCA 90 bp TGTTGTTTAGTTTTTATTGATTCCCTACAATCCCCTCATGTTATTCTGCCAAGTGTCACACATAGATGGTaGAAATTTACTCACCTGACT +
Preference number: 2 (lower is better)
Translates to: CCLVFIDSLQSPHVILPSVTHRW*KFTHLT
Trigger: AGTCAGGTGAGTAAATTTTCACCATCTATGTGTGAC...ACTTGGCAGAATAACATGAGGGGATTGTAGGGAATCAATAAAAACTAAACAACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR-3UTR CCA 90 bp ATTCTGCCAAGTCTCCAAAATGACAAATATTCCCTAAGGCTTCTTCAAAGCCAAAGGGGAGAAACAGCTTaGTATTTTAGAAATACGTAT +
Preference number: 2 (lower is better)
Translates to: ILPSLQNDKYSLRLLQSQRGETA*YFRNTY
Trigger: ATACGTATTTCTAAAATACCAAGCTGTTTCTCCCCT...TTGGCTTTGAAGAAGCCTTAGGGAATATTTGTCATTTTGGAGACTTGGCAGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR GCA 72 bp AGCCAGCCAGCCATGAGGTTGTGTATGGACAAGAGTTaGAGGAAGAGGCAGTGGTGTGCTGGTGCTGGCTTG +
Preference number: 3 (lower is better)
Translates to: SQPAMRLCMDKS*RKRQWCAGAGL
Trigger: CAAGCCAGCACCAGCACACCACTGCCTCTTCCTGCAACTCTTGTCCATACACAACCTCATGGCTGGCTGGCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR CCA 72 bp CAAGAGTTGCAGGAAGAGGCAGTGGTGTGCTGGTGCTaGCTTGCATTTGTTCTGATGGCATGCATCTCTTCC +
Preference number: 3 (lower is better)
Translates to: QELQEEAVVCWC*LAFVLMACISS
Trigger: GGAAGAGATGCATGCCATCAGAACAAATGCAAGCCAGCACCAGCACACCACTGCCTCTTCCTGCAACTCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR-3UTR CAA 90 bp TGTCCTGCTATGCCACCTGAGCCTGGAATGATGTTGATGACCCCCTTTGGAAAGCTGACGTCTCACCCGTaGAAAAGTACTGAGAGGCAG +
Preference number: 3 (lower is better)
Translates to: CPAMPPEPGMMLMTPFGKLTSHP*KSTERQ
Trigger: CTGCCTCTCAGTACTTTTCAACGGGTGAGACGTCAG...CTTTCCAAAGGGGGTCATCAACATCATTCCAGGCTCAGGTGGCATAGCAGGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552270.1
3UTR-3UTR CAA 90 bp CCACCACATTTCTGTCTGATCTCTTCAACCAGCCTGGCAACATCCATTGAGCTTCCAGCCCAGATGACCTaGATGGTCTCTGCCACTTTC +
Preference number: 3 (lower is better)
Translates to: PPHFCLISSTSLATSIELPAQMT*MVSATF
Trigger: GAAAGTGGCAGAGACCATCAAGGTCATCTGGGCTGG...AAGCTCAATGGATGTTGCCAGGCTGGTTGAAGAGATCAGACAGAAATGTGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552270.1
3UTR-3UTR CAA 90 bp ACTTGTCTTCCCCCGTACACCAAAGTGGCCCCTTCTTTCACTCCAGTTTCACAGTTTGGACGGGCCTGGTaGATTGGAATAGTAGAACCC +
Preference number: 3 (lower is better)
Translates to: TCLPPYTKVAPSFTPVSQFGRAW*IGIVEP
Trigger: GGGTTCTACTATTCCAATCAACCAGGCCCGTCCAAA...CTGTGAAACTGGAGTGAAAGAAGGGGCCACTTTGGTGTACGGGGGAAGACAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552270.1
3UTR CCA 72 bp TATGGACAAGAGTTGCAGGAAGAGGCAGTGGTGTGCTaGTGCTGGCTTGCATTTGTTCTGATGGCATGCATC +
Preference number: 3 (lower is better)
Translates to: YGQELQEEAVVC*CWLAFVLMACI
Trigger: GATGCATGCCATCAGAACAAATGCAAGCCAGCACCAGCACACCACTGCCTCTTCCTGCAACTCTTGTCCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR-3UTR CAA 90 bp TGTCCTGCTATGCCACCTGAGCCTGGAATGATGTTGATGACCCCCTTTGGAAAGACGAGACCAGGCTTCTaGGCACCTTTAATTTCCAGT +
Preference number: 3 (lower is better)
Translates to: CPAMPPEPGMMLMTPFGKTRPGF*APLISS
Trigger: ACTGGAAATTAAAGGTGCCAAGAAGCCTGGTCTCGT...CTTTCCAAAGGGGGTCATCAACATCATTCCAGGCTCAGGTGGCATAGCAGGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552270.1
3UTR-3UTR CAA 90 bp ACTTGTCTTCCCCCGTACACCAAAGTGGCCCCTTCTTTCACTCCAGTTTCACAGCCAGTGAAACCAAGTTaGCGGATGTCAGGATGTTCA +
Preference number: 3 (lower is better)
Translates to: TCLPPYTKVAPSFTPVSQPVKPS*RMSGCS
Trigger: TGAACATCCTGACATCCGCAAACTTGGTTTCACTGG...CTGTGAAACTGGAGTGAAAGAAGGGGCCACTTTGGTGTACGGGGGAAGACAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552270.1
3UTR-3UTR CAA 90 bp GATCTGTTTGCCAATAGGAGTGGATCCAGTGAAACCAAGTTTGCGGATGTCAGGTTGAGCACTAAGGTATaGCCTGCTGCCAAACACGCA +
Preference number: 3 (lower is better)
Translates to: DLFANRSGSSETKFADVRLSTKV*PAAKHA
Trigger: TGCGTGTTTGGCAGCAGGCAATACCTTAGTGCTCAA...CCTGACATCCGCAAACTTGGTTTCACTGGATCCACTCCTATTGGCAAACAGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552270.1
3UTR TCA 72 bp CTTCATTCTGCAACTGAAGCCCACCACATTTCTGTCTaGTCTCTTCAACCAGCCTGGCAACATCCATTGAGC +
Preference number: 3 (lower is better)
Translates to: LHSATEAHHISV*SLQPAWQHPLS
Trigger: GCTCAATGGATGTTGCCAGGCTGGTTGAAGAGATCAGACAGAAATGTGGTGGGCTTCAGTTGCAGAATGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552270.1
3UTR CCA 72 bp ATCAGTGGATCACTCTTGTCACAAATTCGTCGTGGATaGATTCTTCCACGAACAACCGCCCAGCAGCAATAC +
Preference number: 3 (lower is better)
Translates to: ISGSLLSQIRRG*ILPRTTAQQQY
Trigger: GTATTGCTGCTGGGCGGTTGTTCGTGGAAGAATCCATCCACGACGAATTTGTGACAAGAGTGATCCACTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552270.1
3UTR-3UTR CAA 90 bp TTTAAACAGACGAGTGAAGTGACACTGTCTGACTTAAGCTTTGAACAGGACCGCAGGCCCATACTGGAGTaGGGGAGGGTTGTTCATATC +
Preference number: 3 (lower is better)
Translates to: FKQTSEVTLSDLSFEQDRRPILE*GRVVHI
Trigger: GATATGAACAACCCTCCCCAACTCCAGTATGGGCCT...GCGGTCCTGTTCAAAGCTTAAGTCAGACAGTGTCACTTCACTCGTCTGTTTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR-3UTR CAA 90 bp TGGCTTGCATTTGTTCTGATGGCATGCATCTCTTCCCAAACTCTGTATTCAGTGAGGCATGACAATCGCTaGAACCCAAGAGGCAGAGGT +
Preference number: 3 (lower is better)
Translates to: WLAFVLMACISSQTLYSVRHDNR*NPRGRG
Trigger: ACCTCTGCCTCTTGGGTTCAAGCGATTGTCATGCCT...CACTGAATACAGAGTTTGGGAAGAGATGCATGCCATCAGAACAAATGCAAGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR-3UTR CAA 90 bp TTGAGGAGAGACCTGCAGGAAGTGAGCCAGCCAGCCATGAGGTTGTGTATGGACGTCCCGGAGAACTATTaGTTAAATATTTTACCAGCA +
Preference number: 3 (lower is better)
Translates to: LRRDLQEVSQPAMRLCMDVPENY*LNILPA
Trigger: TGCTGGTAAAATATTTAACAAATAGTTCTCCGGGAC...GTCCATACACAACCTCATGGCTGGCTGGCTCACTTCCTGCAGGTCTCTCCTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR-3UTR CAA 90 bp TTTAAACAGACGAGTGAAGTGACACTGTCTGACTTAAGCTTTGAACAGGACCGCAGAGGCTCAGAGGAGTaGCGAGAGTTTCCCAAAGTT +
Preference number: 3 (lower is better)
Translates to: FKQTSEVTLSDLSFEQDRRGSEE*REFPKV
Trigger: AACTTTGGGAAACTCTCGCAACTCCTCTGAGCCTCT...GCGGTCCTGTTCAAAGCTTAAGTCAGACAGTGTCACTTCACTCGTCTGTTTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR-3UTR CAA 90 bp TGGCTTGCATTTGTTCTGATGGCATGCATCTCTTCCCAAACTCTGTATTCAGTGAGCAGGCTTGTTCTGTaGAGGAAGTCAAGGCAGTCA +
Preference number: 3 (lower is better)
Translates to: WLAFVLMACISSQTLYSVSRLVL*RKSRQS
Trigger: TGACTGCCTTGACTTCCTCAACAGAACAAGCCTGCT...CACTGAATACAGAGTTTGGGAAGAGATGCATGCCATCAGAACAAATGCAAGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR-3UTR CAA 90 bp ACTTGTCTTCCCCCGTACACCAAAGTGGCCCCTTCTTTCACTCCAGTTTCACAGATACAGTTCTCTCCTTaGTTGAAAAATACTGCTCCC +
Preference number: 3 (lower is better)
Translates to: TCLPPYTKVAPSFTPVSQIQFSP*LKNTAP
Trigger: GGGAGCAGTATTTTTCAACAAAGGAGAGAACTGTAT...CTGTGAAACTGGAGTGAAAGAAGGGGCCACTTTGGTGTACGGGGGAAGACAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000552270.1
3UTR GCA 72 bp GCCTGGAATGATGTTGATGACCCCCTTTGGAAAGCCTaGTTTCACAGACAGTTCTGCAAACTTCAAAGCAGT +
Preference number: 3 (lower is better)
Translates to: AWNDVDDPLWKA*FHRQFCKLQSS
Trigger: ACTGCTTTGAAGTTTGCAGAACTGTCTGTGAAAGCAGGCTTTCCAAAGGGGGTCATCAACATCATTCCAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552270.1
3UTR-3UTR CAA 90 bp TGTTTGCCAATAGGAGTGGATCCAGTGAAACCAAGTTTGCGGATGTCAGGATGTAGAACAAGTCCATTTTaGGTAACGAGACCAGGCTTC +
Preference number: 3 (lower is better)
Translates to: CLPIGVDPVKPSLRMSGCRTSPF*VTRPGF
Trigger: GAAGCCTGGTCTCGTTACCAAAAATGGACTTGTTCT...ACATCCTGACATCCGCAAACTTGGTTTCACTGGATCCACTCCTATTGGCAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552270.1
3UTR-3UTR CAA 90 bp TTTAAACAGACGAGTGAAGTGACACTGTCTGACTTAAGCTTTGAACAGGACCGCGACCAGTTGGGAGACTaGAGCAAAATTGTAGGAAAG +
Preference number: 3 (lower is better)
Translates to: FKQTSEVTLSDLSFEQDRDQLGD*SKIVGK
Trigger: CTTTCCTACAATTTTGCTCAAGTCTCCCAACTGGTC...GCGGTCCTGTTCAAAGCTTAAGTCAGACAGTGTCACTTCACTCGTCTGTTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR-3UTR CAA 90 bp GTCCCCATTTTGGAATTTAGAAATGACCATAATAGGCCCAAAGGATTCCTCTTTGGATACCTTCATATGTaGCCCCTTCTTCTGGCTGGG +
Preference number: 3 (lower is better)
Translates to: VPILEFRNDHNRPKGFLFGYLHM*PLLLAG
Trigger: CCCAGCCAGAAGAAGGGGCAACATATGAAGGTATCC...AAAGAGGAATCCTTTGGGCCTATTATGGTCATTTCTAAATTCCAAAATGGGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000552270.1
3UTR-3UTR CAA 90 bp GATCTGTTTGCCAATAGGAGTGGATCCAGTGAAACCAAGTTTGCGGATGTCAGGTTTCCTCACGACCTTTaGGATAAAGCCTTCAAACTT +
Preference number: 3 (lower is better)
Translates to: DLFANRSGSSETKFADVRFPHDL*DKAFKL
Trigger: AAGTTTGAAGGCTTTATCCAAAAGGTCGTGAGGAAA...CCTGACATCCGCAAACTTGGTTTCACTGGATCCACTCCTATTGGCAAACAGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552270.1
3UTR-3UTR CAA 90 bp AGACCAGTTGGGAGACTTGAGCAAAATTGTAGGAAAGAGGTAACAGGCCAGGTGCTTTTCCTTGTACTATaGCCATTTTTCATTGTGTGG +
Preference number: 3 (lower is better)
Translates to: RPVGRLEQNCRKEVTGQVLFLVL*PFFIVW
Trigger: CCACACAATGAAAAATGGCAATAGTACAAGGAAAAG...CACCTGGCCTGTTACCTCTTTCCTACAATTTTGCTCAAGTCTCCCAACTGGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR-3UTR CAA 90 bp TGGCTTGCATTTGTTCTGATGGCATGCATCTCTTCCCAAACTCTGTATTCAGTGCTTTCTGGCTATCTTTaGGAGACTCATGTGATTCAG +
Preference number: 3 (lower is better)
Translates to: WLAFVLMACISSQTLYSVLSGYL*ETHVIQ
Trigger: CTGAATCACATGAGTCTCCAAAAGATAGCCAGAAAG...CACTGAATACAGAGTTTGGGAAGAGATGCATGCCATCAGAACAAATGCAAGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR-3UTR CAA 90 bp TTTAAACAGACGAGTGAAGTGACACTGTCTGACTTAAGCTTTGAACAGGACCGCAGGTCTGTGAACCCTTaGAAGATACTTGCAGAATTG +
Preference number: 3 (lower is better)
Translates to: FKQTSEVTLSDLSFEQDRRSVNP*KILAEL
Trigger: CAATTCTGCAAGTATCTTCAAAGGGTTCACAGACCT...GCGGTCCTGTTCAAAGCTTAAGTCAGACAGTGTCACTTCACTCGTCTGTTTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR-3UTR CAA 90 bp GATCTGTTTGCCAATAGGAGTGGATCCAGTGAAACCAAGTTTGCGGATGTCAGGTTTCAAAAGCATCTTTaGCTGCTGCTACTGCTTTAT +
Preference number: 3 (lower is better)
Translates to: DLFANRSGSSETKFADVRFQKHL*LLLLLY
Trigger: ATAAAGCAGTAGCAGCAGCAAAAGATGCTTTTGAAA...CCTGACATCCGCAAACTTGGTTTCACTGGATCCACTCCTATTGGCAAACAGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552270.1
3UTR CCA 72 bp AGCGTAGGATACTTTGCATATTGTAGATCCATCTGTTaGGTTGATAGTGTCGTAAGTCTTTCCATCGTCTGC +
Preference number: 3 (lower is better)
Translates to: SVGYFAYCRSIC*VDSVVSLSIVC
Trigger: GCAGACGATGGAAAGACTTACGACACTATCAACCCAACAGATGGATCTACAATATGCAAAGTATCCTACGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552270.1
3UTR-3UTR CAA 90 bp TGCTTAAAGTGTCCACACCTCCCGATTCAGGTGATAATAAGATCACAGCTTCATCTTTCTGGCTATCTTTaGGAGACTCATGTGATTCAG +
Preference number: 3 (lower is better)
Translates to: CLKCPHLPIQVIIRSQLHLSGYL*ETHVIQ
Trigger: CTGAATCACATGAGTCTCCAAAAGATAGCCAGAAAG...ATGAAGCTGTGATCTTATTATCACCTGAATCGGGAGGTGTGGACACTTTAAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR-3UTR CAA 90 bp TTTAAACAGACGAGTGAAGTGACACTGTCTGACTTAAGCTTTGAACAGGACCGCGATTCCCAAAGAGTTTaGCAGCCCAGAGAATATTTA +
Preference number: 3 (lower is better)
Translates to: FKQTSEVTLSDLSFEQDRDSQRV*QPREYL
Trigger: TAAATATTCTCTGGGCTGCAAAACTCTTTGGGAATC...GCGGTCCTGTTCAAAGCTTAAGTCAGACAGTGTCACTTCACTCGTCTGTTTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR-3UTR CAA 90 bp TGGCTTGCATTTGTTCTGATGGCATGCATCTCTTCCCAAACTCTGTATTCAGTGGATTCCCAAAGAGTTTaGCAGCCCAGAGAATATTTA +
Preference number: 3 (lower is better)
Translates to: WLAFVLMACISSQTLYSVDSQRV*QPREYL
Trigger: TAAATATTCTCTGGGCTGCAAAACTCTTTGGGAATC...CACTGAATACAGAGTTTGGGAAGAGATGCATGCCATCAGAACAAATGCAAGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR-3UTR CAA 90 bp TGCTTAAAGTGTCCACACCTCCCGATTCAGGTGATAATAAGATCACAGCTTCATTATTACACAGAGCCTTaGATTCTGATCAGCCAGATC +
Preference number: 3 (lower is better)
Translates to: CLKCPHLPIQVIIRSQLHYYTEP*ILISQI
Trigger: GATCTGGCTGATCAGAATCAAAGGCTCTGTGTAATA...ATGAAGCTGTGATCTTATTATCACCTGAATCGGGAGGTGTGGACACTTTAAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR TCA 72 bp TCAGAAATTTGCCGCCTTCTAGTCACACATAGATGGTaGAAATTTACTCACCTGACTACTTCTGTCTGCCAA +
Preference number: 3 (lower is better)
Translates to: SEICRLLVTHRW*KFTHLTTSVCQ
Trigger: TTGGCAGACAGAAGTAGTCAGGTGAGTAAATTTTCACCATCTATGTGTGACTAGAAGGCGGCAAATTTCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR-3UTR CAA 90 bp TGGCTTGCATTTGTTCTGATGGCATGCATCTCTTCCCAAACTCTGTATTCAGTGTCCAATAAATGCACCTaGTGTATTATAACTGCATGG +
Preference number: 3 (lower is better)
Translates to: WLAFVLMACISSQTLYSVSNKCT*CIITAW
Trigger: CCATGCAGTTATAATACACAAGGTGCATTTATTGGA...CACTGAATACAGAGTTTGGGAAGAGATGCATGCCATCAGAACAAATGCAAGCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR-3UTR CAA 90 bp TTTAAACAGACGAGTGAAGTGACACTGTCTGACTTAAGCTTTGAACAGGACCGCTCCAATAAATGCACCTaGTGTATTATAACTGCATGG +
Preference number: 3 (lower is better)
Translates to: FKQTSEVTLSDLSFEQDRSNKCT*CIITAW
Trigger: CCATGCAGTTATAATACACAAGGTGCATTTATTGGA...GCGGTCCTGTTCAAAGCTTAAGTCAGACAGTGTCACTTCACTCGTCTGTTTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR-3UTR CAA 90 bp TGTTGTTTAGTTTTTATTGATTCCCTACAATCCCCTCATGTTATTCTGCCAAGTAGAGGCTCAGAGGAGTaGCGAGAGTTTCCCAAAGTT +
Preference number: 3 (lower is better)
Translates to: CCLVFIDSLQSPHVILPSRGSEE*REFPKV
Trigger: AACTTTGGGAAACTCTCGCAACTCCTCTGAGCCTCT...ACTTGGCAGAATAACATGAGGGGATTGTAGGGAATCAATAAAAACTAAACAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR-3UTR CAA 90 bp CTTTTGGATAAAGCCTTCAAACTTGGTGGCCATATAGACATCTTCATTCTGCAATCAATAATGGGGACATaGCTTAAAATTCCAGCCCAG +
Preference number: 3 (lower is better)
Translates to: LLDKAFKLGGHIDIFILQSIMGT*LKIPAQ
Trigger: CTGGGCTGGAATTTTAAGCAATGTCCCCATTATTGA...TTGCAGAATGAAGATGTCTATATGGCCACCAAGTTTGAAGGCTTTATCCAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000552270.1
3UTR-3UTR CAA 90 bp ACATACATAGCTTTGTTTATGTCTCTTGTAAAAACCCCTGAGGCCAAACCATACGAAACTTTCTTCAAGTaGCTAACAGCACAGCTCTTC +
Preference number: 3 (lower is better)
Translates to: TYIALFMSLVKTPEAKPYETFFK*LTAQLF
Trigger: GAAGAGCTGTGCTGTTAGCAACTTGAAGAAAGTTTC...GTATGGTTTGGCCTCAGGGGTTTTTACAAGAGACATAAACAAAGCTATGTATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552270.1
3UTR TCA 72 bp ACAATCCCCTCATGTTATTCTGCCAAGTCTCCAAAATaGCAAATATTCCCTAAGGCTTCTTCAAAGCCAAAG +
Preference number: 3 (lower is better)
Translates to: TIPSCYSAKSPK*QIFPKASSKPK
Trigger: CTTTGGCTTTGAAGAAGCCTTAGGGAATATTTGTCATTTTGGAGACTTGGCAGAATAACATGAGGGGATTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR TCA 72 bp ATACATAGCTTTGTTTATGTCTCTTGTAAAAACCCCTaGGGCCAAACCATACTCTGTACTATTTGCTCGCTG +
Preference number: 3 (lower is better)
Translates to: IHSFVYVSCKNP*GQTILCTICSL
Trigger: CAGCGAGCAAATAGTACAGAGTATGGTTTGGCCTCAGGGGTTTTTACAAGAGACATAAACAAAGCTATGTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552270.1
3UTR GCA 72 bp TATTGCCATTTTTCATTGTGTGGCATTTTTCAGTGCTaGTGTATCAGGCATTGTGTCAGAACAATGGATGAG +
Preference number: 3 (lower is better)
Translates to: YCHFSLCGIFQC*CIRHCVRTMDE
Trigger: CTCATCCATTGTTCTGACACAATGCCTGATACAGCAGCACTGAAAAATGCCACACAATGAAAAATGGCAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR TCA 72 bp CTGTGTGATTTGAGCAGGTTACTTAACCTCTCCATTTaGAAGCAAACATTTATTGGGCTCCTGTTACACATT +
Preference number: 3 (lower is better)
Translates to: LCDLSRLLNLSI*KQTFIGLLLHI
Trigger: AATGTGTAACAGGAGCCCAATAAATGTTTGCTTTCAAATGGAGAGGTTAAGTAACCTGCTCAAATCACACAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR TCA 72 bp TATCTCGACTTAGTTAAAACCACCAGATGCATTGCTTaGAAACCTGTTCTGCCACTTAATAGCTGTGTGATT +
Preference number: 3 (lower is better)
Translates to: YLDLVKTTRCIA*KPVLPLNSCVI
Trigger: AATCACACAGCTATTAAGTGGCAGAACAGGTTTTCAAGCAATGCATCTGGTGGTTTTAACTAAGTCGAGATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR-3UTR CAA 90 bp ACATACATAGCTTTGTTTATGTCTCTTGTAAAAACCCCTGAGGCCAAACCATACATCGATGTCCCCATTTaGGAATTTAGAAATGACCAT +
Preference number: 3 (lower is better)
Translates to: TYIALFMSLVKTPEAKPYIDVPI*EFRNDH
Trigger: ATGGTCATTTCTAAATTCCAAAATGGGGACATCGAT...GTATGGTTTGGCCTCAGGGGTTTTTACAAGAGACATAAACAAAGCTATGTATGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000552270.1
3UTR TCA 72 bp AGAGTTTCCCAAAGTTACATAGATAGGAAGATGGTATaGTACGACCAGGATCAGCCTTCTACTATATCATAT +
Preference number: 3 (lower is better)
Translates to: RVSQSYIDRKMV*YDQDQPSTISY
Trigger: ATATGATATAGTAGAAGGCTGATCCTGGTCGTATCATACCATCTTCCTATCTATGTAACTTTGGGAAACTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR GCA 72 bp AATAATAATTTAATCCCCCTTATTTCTCATGTCTCATaGCTTATCCATCATCCCTCATATCCTACTCTTAGC +
Preference number: 3 (lower is better)
Translates to: NNNLIPLISHVS*LIHHPSYPTLS
Trigger: GCTAAGAGTAGGATATGAGGGATGATGGATAAGGCATGAGACATGAGAAATAAGGGGGATTAAATTATTATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR GCA 72 bp TTGAGTACTTACCATGAGCAAAGCATTAATGTGAGGTaGTTTACTTACATTACTGCAATGAATTCTCCTATT +
Preference number: 3 (lower is better)
Translates to: LSTYHEQSINVR*FTYITAMNSPI
Trigger: AATAGGAGAATTCATTGCAGTAATGTAAGTAAAGCACCTCACATTAATGCTTTGCTCATGGTAAGTACTCAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR CCA 72 bp AATGGGCTGTTAATAGTTTCCATTTCTTCAATGCTATaGTCCAAACGCCTTGTTAAGTGCATTATGTATATT +
Preference number: 3 (lower is better)
Translates to: NGLLIVSISSML*SKRLVKCIMYI
Trigger: AATATACATAATGCACTTAACAAGGCGTTTGGACCATAGCATTGAAGAAATGGAAACTATTAACAGCCCATT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CCA 90 bp ACCAGCACACCCCTGGGAAGAGGAAGAATAAGGACAGAGGCCCTGAGGCAGGAGAAGCGCCGGAGCGCCTaGCTGCCCCGCCGCAGCATG +
Preference number: 4 (lower is better)
Translates to: TSTPLGRGRIRTEALRQEKRRSA*LPRRSM
Trigger: CATGCTGCGGCGGGGCAGCCAGGCGCTCCGGCGCTT...CTCCTGCCTCAGGGCCTCTGTCCTTATTCTTCCTCTTCCCAGGGGTGTGCTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258494.14
CDS-3UTR CCA 90 bp ACCAGCACACCCCTGGGAAGAGGAAGAATAAGGACAGAGGCCCTGAGGCAGGAGAAGCACAGTGAATGGTaGCGAAGCCCGAGCCGGGTC +
Preference number: 4 (lower is better)
Translates to: TSTPLGRGRIRTEALRQEKHSEW*RSPSRV
Trigger: GACCCGGCTCGGGCTTCGCCACCATTCACTGTGCTT...CTCCTGCCTCAGGGCCTCTGTCCTTATTCTTCCTCTTCCCAGGGGTGTGCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652515.1
CDS-3UTR TCA 90 bp ACCAGCACACCCCTGGGAAGAGGAAGAATAAGGACAGAGGCCCTGAGGCAGGAGACACGGTCGGCTCCATaGAAAAGCCTGGCCTTTGGA +
Preference number: 4 (lower is better)
Translates to: TSTPLGRGRIRTEALRQETRSAP*KSLAFG
Trigger: TCCAAAGGCCAGGCTTTTTCATGGAGCCGACCGTGT...CTCCTGCCTCAGGGCCTCTGTCCTTATTCTTCCTCTTCCCAGGGGTGTGCTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CCA 90 bp TTGAGGAGAGACCTGCAGGAAGTGAGCCAGCCAGCCATGAGGTTGTGTATGGACACCCCTACTACTCGGTaGCCCTCTTTGCGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: LRRDLQEVSQPAMRLCMDTPTTR*PSLRRW
Trigger: CCACCTCCGCAAAGAGGGCCACCGAGTAGTAGGGGT...GTCCATACACAACCTCATGGCTGGCTGGCTCACTTCCTGCAGGTCTCTCCTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR TCA 90 bp ACCAGCACACCCCTGGGAAGAGGAAGAATAAGGACAGAGGCCCTGAGGCAGGAGCCTTGTCTGGAACTGTaGACACCCCTACTACTCGGT +
Preference number: 4 (lower is better)
Translates to: TSTPLGRGRIRTEALRQEPCLEL*TPLLLG
Trigger: ACCGAGTAGTAGGGGTGTTCACAGTTCCAGACAAGG...CTCCTGCCTCAGGGCCTCTGTCCTTATTCTTCCTCTTCCCAGGGGTGTGCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR GCA 90 bp ACCAGCACACCCCTGGGAAGAGGAAGAATAAGGACAGAGGCCCTGAGGCAGGAGGCAGTGGTGTGCTGGTaGTGGCTTGCATTTGTTCTG +
Preference number: 4 (lower is better)
Translates to: TSTPLGRGRIRTEALRQEAVVCW*WLAFVL
Trigger: CAGAACAAATGCAAGCCAGCACCAGCACACCACTGC...CTCCTGCCTCAGGGCCTCTGTCCTTATTCTTCCTCTTCCCAGGGGTGTGCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CCA 90 bp ACCAGCACACCCCTGGGAAGAGGAAGAATAAGGACAGAGGCCCTGAGGCAGGAGGCCCCTTCTTCTGGCTaGGGTATACGAGGAGCTTTT +
Preference number: 4 (lower is better)
Translates to: TSTPLGRGRIRTEALRQEAPSSG*GIRGAF
Trigger: AAAAGCTCCTCGTATACCCCAGCCAGAAGAAGGGGC...CTCCTGCCTCAGGGCCTCTGTCCTTATTCTTCCTCTTCCCAGGGGTGTGCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CCA 90 bp ACCAGCACACCCCTGGGAAGAGGAAGAATAAGGACAGAGGCCCTGAGGCAGGAGGGTCAGATTGCGATTTaGACGGGCCTGGTTGATTGG +
Preference number: 4 (lower is better)
Translates to: TSTPLGRGRIRTEALRQEGQIAI*TGLVDW
Trigger: CCAATCAACCAGGCCCGTCCAAATCGCAATCTGACC...CTCCTGCCTCAGGGCCTCTGTCCTTATTCTTCCTCTTCCCAGGGGTGTGCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR CAA 72 bp AAGGGCGTGACCTGTGCTGGCTTGAGCACTAAGGTATaGCCTGCTGCCAAACACGCAGCACTCTTCCATGCC +
Preference number: 4 (lower is better)
Translates to: KGVTCAGLSTKV*PAAKHAALFHA
Trigger: GGCATGGAAGAGTGCTGCGTGTTTGGCAGCAGGCAATACCTTAGTGCTCAAGCCAGCACAGGTCACGCCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR TCA 90 bp ACCAGCACACCCCTGGGAAGAGGAAGAATAAGGACAGAGGCCCTGAGGCAGGAGGGCTTGCATTTGTTCTaGTGGCATGCATCTCTTCCC +
Preference number: 4 (lower is better)
Translates to: TSTPLGRGRIRTEALRQEGLHLF*WHASLP
Trigger: GGGAAGAGATGCATGCCATCAGAACAAATGCAAGCC...CTCCTGCCTCAGGGCCTCTGTCCTTATTCTTCCTCTTCCCAGGGGTGTGCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR GCA 90 bp CCACCACATTTCTGTCTGATCTCTTCAACCAGCCTGGCAACATCCATTGAGCTTTGCCCCGCCGCAGCATaGTGGAGAGGAGCGCTAGCA +
Preference number: 4 (lower is better)
Translates to: PPHFCLISSTSLATSIELCPAAA*WRGALA
Trigger: TGCTAGCGCTCCTCTCCAGCATGCTGCGGCGGGGCA...AAGCTCAATGGATGTTGCCAGGCTGGTTGAAGAGATCAGACAGAAATGTGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR GCA 90 bp ACCAGCACACCCCTGGGAAGAGGAAGAATAAGGACAGAGGCCCTGAGGCAGGAGGATACCTTCATATGTTaGCCCTTCTTCTGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: TSTPLGRGRIRTEALRQEDTFIC*PFFWLG
Trigger: CCCCAGCCAGAAGAAGGGGCAACATATGAAGGTATC...CTCCTGCCTCAGGGCCTCTGTCCTTATTCTTCCTCTTCCCAGGGGTGTGCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR GCA 90 bp ACCAGCACACCCCTGGGAAGAGGAAGAATAAGGACAGAGGCCCTGAGGCAGGAGCCCCTTTGGAAAGCCTaGTTTCACAGACAGTTCTGC +
Preference number: 4 (lower is better)
Translates to: TSTPLGRGRIRTEALRQEPLWKA*FHRQFC
Trigger: GCAGAACTGTCTGTGAAAGCAGGCTTTCCAAAGGGG...CTCCTGCCTCAGGGCCTCTGTCCTTATTCTTCCTCTTCCCAGGGGTGTGCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR GCA 90 bp TTGAGGAGAGACCTGCAGGAAGTGAGCCAGCCAGCCATGAGGTTGTGTATGGACGAAGGACGAGCGAGCTaGCCAAAGAAAAGCACCCCT +
Preference number: 4 (lower is better)
Translates to: LRRDLQEVSQPAMRLCMDEGRAS*PKKSTP
Trigger: AGGGGTGCTTTTCTTTGGGCAGCTCGCTCGTCCTTC...GTCCATACACAACCTCATGGCTGGCTGGCTCACTTCCTGCAGGTCTCTCCTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CCA 90 bp TCGTTACCAAAAAGAACAAGTCCATTTTTGGTAACGAGACCAGGCTTCTTGGCAAAGCGCCGGAGCGCCTaGCTGCCCCGCCGCAGCATG +
Preference number: 4 (lower is better)
Translates to: SLPKRTSPFLVTRPGFLAKRRSA*LPRRSM
Trigger: CATGCTGCGGCGGGGCAGCCAGGCGCTCCGGCGCTT...TGCCAAGAAGCCTGGTCTCGTTACCAAAAATGGACTTGTTCTTTTTGGTAACGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR CCA 90 bp ACTTGTCTTCCCCCGTACACCAAAGTGGCCCCTTCTTTCACTCCAGTTTCACAGAATAAACCCGGCCAGTaGAGAAGCGCCGGAGCGCCT +
Preference number: 4 (lower is better)
Translates to: TCLPPYTKVAPSFTPVSQNKPGQ*RSAGAP
Trigger: AGGCGCTCCGGCGCTTCTCCACTGGCCGGGTTTATT...CTGTGAAACTGGAGTGAAAGAAGGGGCCACTTTGGTGTACGGGGGAAGACAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR CCA 90 bp ACTTGTCTTCCCCCGTACACCAAAGTGGCCCCTTCTTTCACTCCAGTTTCACAGACCCCTACTACTCGGTaGCCCTCTTTGCGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: TCLPPYTKVAPSFTPVSQTPTTR*PSLRRW
Trigger: CCACCTCCGCAAAGAGGGCCACCGAGTAGTAGGGGT...CTGTGAAACTGGAGTGAAAGAAGGGGCCACTTTGGTGTACGGGGGAAGACAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR CCA 90 bp TTGAGGAGAGACCTGCAGGAAGTGAGCCAGCCAGCCATGAGGTTGTGTATGGACCCCCGTACACCAAAGTaGCCCCTTCTTTCACTCCAG +
Preference number: 4 (lower is better)
Translates to: LRRDLQEVSQPAMRLCMDPRTPK*PLLSLQ
Trigger: CTGGAGTGAAAGAAGGGGCCACTTTGGTGTACGGGG...GTCCATACACAACCTCATGGCTGGCTGGCTCACTTCCTGCAGGTCTCTCCTCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CCA 90 bp ACCAGCACACCCCTGGGAAGAGGAAGAATAAGGACAGAGGCCCTGAGGCAGGAGAAAAAGCCTGGCCTTTaGACTTGTCTTCCCCCGTAC +
Preference number: 4 (lower is better)
Translates to: TSTPLGRGRIRTEALRQEKKPGL*TCLPPY
Trigger: GTACGGGGGAAGACAAGTCCAAAGGCCAGGCTTTTT...CTCCTGCCTCAGGGCCTCTGTCCTTATTCTTCCTCTTCCCAGGGGTGTGCTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CCA 90 bp ACCAGCACACCCCTGGGAAGAGGAAGAATAAGGACAGAGGCCCTGAGGCAGGAGTTTAACTCCGCCAAATaGGGCCGCCACATCTGTCTT +
Preference number: 4 (lower is better)
Translates to: TSTPLGRGRIRTEALRQEFNSAK*GRHICL
Trigger: AAGACAGATGTGGCGGCCCCATTTGGCGGAGTTAAA...CTCCTGCCTCAGGGCCTCTGTCCTTATTCTTCCTCTTCCCAGGGGTGTGCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CCA 90 bp TTTAAACAGACGAGTGAAGTGACACTGTCTGACTTAAGCTTTGAACAGGACCGCTCGCAAGACGCCCGCTaGCACTGCCGGCGCCATGGC +
Preference number: 4 (lower is better)
Translates to: FKQTSEVTLSDLSFEQDRSQDAR*HCRRHG
Trigger: GCCATGGCGCCGGCAGTGCCAGCGGGCGTCTTGCGA...GCGGTCCTGTTCAAAGCTTAAGTCAGACAGTGTCACTTCACTCGTCTGTTTAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652515.1
3UTR CAA 72 bp AGAGACCTGCAGGAAGTGAGCCAGCCAGCCATGAGGTaGTGTATGGACAAGAGTTGCAGGAAGAGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: RDLQEVSQPAMR*CMDKSCRKRQW
Trigger: CCACTGCCTCTTCCTGCAACTCTTGTCCATACACAACCTCATGGCTGGCTGGCTCACTTCCTGCAGGTCTCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR TCA 90 bp ACCAGCACACCCCTGGGAAGAGGAAGAATAAGGACAGAGGCCCTGAGGCAGGAGGGTATAGACAGCCCCTaGATCAAGGGCTTCAATAGT +
Preference number: 4 (lower is better)
Translates to: TSTPLGRGRIRTEALRQEGIDSP*IKGFNS
Trigger: ACTATTGAAGCCCTTGATTCAGGGGCTGTCTATACC...CTCCTGCCTCAGGGCCTCTGTCCTTATTCTTCCTCTTCCCAGGGGTGTGCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR TCA 90 bp ACCAGCACACCCCTGGGAAGAGGAAGAATAAGGACAGAGGCCCTGAGGCAGGAGTTGTGTGTGTGCACATaGATTTTGGGGGTAGAAGCG +
Preference number: 4 (lower is better)
Translates to: TSTPLGRGRIRTEALRQELCVCT*ILGVEA
Trigger: CGCTTCTACCCCCAAAATTCATGTGCACACACACAA...CTCCTGCCTCAGGGCCTCTGTCCTTATTCTTCCTCTTCCCAGGGGTGTGCTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR GCA 90 bp GATCTGTTTGCCAATAGGAGTGGATCCAGTGAAACCAAGTTTGCGGATGTCAGGGCAGAGGCTCCTCTGTaGCTGGGCAGGATGGATGGG +
Preference number: 4 (lower is better)
Translates to: DLFANRSGSSETKFADVRAEAPL*LGRMDG
Trigger: CCCATCCATCCTGCCCAGGCACAGAGGAGCCTCTGC...CCTGACATCCGCAAACTTGGTTTCACTGGATCCACTCCTATTGGCAAACAGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR GCA 90 bp ACTTGCAGAATTGTGTGTGTGCACATGAATTTTGGGGGTAGAAGCGGGACACAGGCAGAGGCTCCTCTGTaGCTGGGCAGGATGGATGGG +
Preference number: 4 (lower is better)
Translates to: TCRIVCVHMNFGGRSGTQAEAPL*LGRMDG
Trigger: CCCATCCATCCTGCCCAGGCACAGAGGAGCCTCTGC...CTGTGTCCCGCTTCTACCCCCAAAATTCATGTGCACACACACAATTCTGCAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR GCA 90 bp ACCAGCACACCCCTGGGAAGAGGAAGAATAAGGACAGAGGCCCTGAGGCAGGAGGAGGCTCAGAGGAGTTaGGAGAGTTTCCCAAAGTTA +
Preference number: 4 (lower is better)
Translates to: TSTPLGRGRIRTEALRQEEAQRS*ESFPKL
Trigger: TAACTTTGGGAAACTCTCGCAACTCCTCTGAGCCTC...CTCCTGCCTCAGGGCCTCTGTCCTTATTCTTCCTCTTCCCAGGGGTGTGCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR GCA 90 bp TTGAGGAGAGACCTGCAGGAAGTGAGCCAGCCAGCCATGAGGTTGTGTATGGACGCAGTGGTGTGCTGGTaGTGGCTTGCATTTGTTCTG +
Preference number: 4 (lower is better)
Translates to: LRRDLQEVSQPAMRLCMDAVVCW*WLAFVL
Trigger: CAGAACAAATGCAAGCCAGCACCAGCACACCACTGC...GTCCATACACAACCTCATGGCTGGCTGGCTCACTTCCTGCAGGTCTCTCCTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR GCA 90 bp TTGAGGAGAGACCTGCAGGAAGTGAGCCAGCCAGCCATGAGGTTGTGTATGGACGAAGAGGCAGTGGTGTaGTGGTGCTGGCTTGCATTT +
Preference number: 4 (lower is better)
Translates to: LRRDLQEVSQPAMRLCMDEEAVV*WCWLAF
Trigger: AAATGCAAGCCAGCACCAGCACACCACTGCCTCTTC...GTCCATACACAACCTCATGGCTGGCTGGCTCACTTCCTGCAGGTCTCTCCTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CCA 90 bp TTGAGGAGAGACCTGCAGGAAGTGAGCCAGCCAGCCATGAGGTTGTGTATGGACGGGGCCCATGATCAGTaGATCTGTCAAGTGGATCAC +
Preference number: 4 (lower is better)
Translates to: LRRDLQEVSQPAMRLCMDGAHDQ*ICQVDH
Trigger: GTGATCCACTTGACAGATCCACTGATCATGGGCCCC...GTCCATACACAACCTCATGGCTGGCTGGCTCACTTCCTGCAGGTCTCTCCTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR TCA 90 bp ACCAGCACACCCCTGGGAAGAGGAAGAATAAGGACAGAGGCCCTGAGGCAGGAGACTTCAGCTTGTTTTTaGAATAAACCCGGCCAGTGG +
Preference number: 4 (lower is better)
Translates to: TSTPLGRGRIRTEALRQETSACF*NKPGQW
Trigger: CCACTGGCCGGGTTTATTTCAAAAACAAGCTGAAGT...CTCCTGCCTCAGGGCCTCTGTCCTTATTCTTCCTCTTCCCAGGGGTGTGCTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000258494.14
CDS-3UTR TCA 90 bp ACCAGCACACCCCTGGGAAGAGGAAGAATAAGGACAGAGGCCCTGAGGCAGGAGTCTTCATTCTGCAACTaGAGCCCACCACATTTCTGT +
Preference number: 4 (lower is better)
Translates to: TSTPLGRGRIRTEALRQESSFCN*SPPHFC
Trigger: ACAGAAATGTGGTGGGCTTCAGTTGCAGAATGAAGA...CTCCTGCCTCAGGGCCTCTGTCCTTATTCTTCCTCTTCCCAGGGGTGTGCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR GCA 90 bp ACCAGCACACCCCTGGGAAGAGGAAGAATAAGGACAGAGGCCCTGAGGCAGGAGAAGGGCTTCAATAGTTaGCAGCTCTTCTTGGTTCTC +
Preference number: 4 (lower is better)
Translates to: TSTPLGRGRIRTEALRQEKGFNS*QLFLVL
Trigger: GAGAACCAAGAAGAGCTGGCAACTATTGAAGCCCTT...CTCCTGCCTCAGGGCCTCTGTCCTTATTCTTCCTCTTCCCAGGGGTGTGCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR GCA 90 bp GAGACCAGGCTTCTTGGCACCTTTAATTTCCAGTGGTTCTCCAGGAGGCACAGACGCAGCACTCTTCCATaGCAGCATCATCAGCGGGTA +
Preference number: 4 (lower is better)
Translates to: ETRLLGTFNFQWFSRRHRRSTLP*QHHQRV
Trigger: TACCCGCTGATGATGCTGGCATGGAAGAGTGCTGCG...TCTGTGCCTCCTGGAGAACCACTGGAAATTAAAGGTGCCAAGAAGCCTGGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR CCA 90 bp ACCAGCACACCCCTGGGAAGAGGAAGAATAAGGACAGAGGCCCTGAGGCAGGAGATCTCTGAAGAAGGATaGGTCCTGTATCCAAGCCAT +
Preference number: 4 (lower is better)
Translates to: TSTPLGRGRIRTEALRQEISEEG*VLYPSH
Trigger: ATGGCTTGGATACAGGACCCATCCTTCTTCAGAGAT...CTCCTGCCTCAGGGCCTCTGTCCTTATTCTTCCTCTTCCCAGGGGTGTGCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CCA 90 bp ACTTGTCTTCCCCCGTACACCAAAGTGGCCCCTTCTTTCACTCCAGTTTCACAGCCCCGTACACCAAAGTaGCCCCTTCTTTCACTCCAG +
Preference number: 4 (lower is better)
Translates to: TCLPPYTKVAPSFTPVSQPRTPK*PLLSLQ
Trigger: CTGGAGTGAAAGAAGGGGCCACTTTGGTGTACGGGG...CTGTGAAACTGGAGTGAAAGAAGGGGCCACTTTGGTGTACGGGGGAAGACAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR CCA 90 bp TTGAGGAGAGACCTGCAGGAAGTGAGCCAGCCAGCCATGAGGTTGTGTATGGACTGCTTTAACATGGCCTaGCCCTCTTCATGGTCCATC +
Preference number: 4 (lower is better)
Translates to: LRRDLQEVSQPAMRLCMDCFNMA*PSSWSI
Trigger: GATGGACCATGAAGAGGGCCAGGCCATGTTAAAGCA...GTCCATACACAACCTCATGGCTGGCTGGCTCACTTCCTGCAGGTCTCTCCTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CCA 90 bp ACCAGCACACCCCTGGGAAGAGGAAGAATAAGGACAGAGGCCCTGAGGCAGGAGGTAAATGCTTTAACATaGCCTGGCCCTCTTCATGGT +
Preference number: 4 (lower is better)
Translates to: TSTPLGRGRIRTEALRQEVNALT*PGPLHG
Trigger: ACCATGAAGAGGGCCAGGCCATGTTAAAGCATTTAC...CTCCTGCCTCAGGGCCTCTGTCCTTATTCTTCCTCTTCCCAGGGGTGTGCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CCA 90 bp TTGAGGAGAGACCTGCAGGAAGTGAGCCAGCCAGCCATGAGGTTGTGTATGGACGTGGTGTGCTGGTGCTaGCTTGCATTTGTTCTGATG +
Preference number: 4 (lower is better)
Translates to: LRRDLQEVSQPAMRLCMDVVCWC*LAFVLM
Trigger: CATCAGAACAAATGCAAGCCAGCACCAGCACACCAC...GTCCATACACAACCTCATGGCTGGCTGGCTCACTTCCTGCAGGTCTCTCCTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR CAA 72 bp CGTTGTCCTGCTATGCCACCTGAGCCTGGAATGATGTaGATGACCCCCTTTGGAAAGCCTGCTTTCACAGAC +
Preference number: 4 (lower is better)
Translates to: RCPAMPPEPGMM*MTPFGKPAFTD
Trigger: GTCTGTGAAAGCAGGCTTTCCAAAGGGGGTCATCAACATCATTCCAGGCTCAGGTGGCATAGCAGGACAACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR TCA 90 bp ACCAGCACACCCCTGGGAAGAGGAAGAATAAGGACAGAGGCCCTGAGGCAGGAGTTTTGGAGACTCATGTaGTTCAGAAATTTGCCGCCT +
Preference number: 4 (lower is better)
Translates to: TSTPLGRGRIRTEALRQEFWRLM*FRNLPP
Trigger: AGGCGGCAAATTTCTGAATCACATGAGTCTCCAAAA...CTCCTGCCTCAGGGCCTCTGTCCTTATTCTTCCTCTTCCCAGGGGTGTGCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR TCA 90 bp CCTCCTGCCTCAACACACCCAATCTTCTTAAGTGTGTCCAGAGTTGTAAAGGGCGCAGGCTGGGGAGGGTaGTGTTCCAATTCCAGTTCA +
Preference number: 4 (lower is better)
Translates to: PPASTHPIFLSVSRVVKGAGWGG*CSNSSS
Trigger: TGAACTGGAATTGGAACATCACCCTCCCCAGCCTGC...GCCCTTTACAACTCTGGACACACTTAAGAAGATTGGGTGTGTTGAGGCAGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR GCA 90 bp TGCTTAAAGTGTCCACACCTCCCGATTCAGGTGATAATAAGATCACAGCTTCATTGCCCCGCCGCAGCATaGTGGAGAGGAGCGCTAGCA +
Preference number: 4 (lower is better)
Translates to: CLKCPHLPIQVIIRSQLHCPAAA*WRGALA
Trigger: TGCTAGCGCTCCTCTCCAGCATGCTGCGGCGGGGCA...ATGAAGCTGTGATCTTATTATCACCTGAATCGGGAGGTGTGGACACTTTAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258494.14
CDS-3UTR GCA 90 bp ACCTTGATGGTCTCTGCCACTTTCACCTCTTCAGCTGTCAGTTCTACCACTGACCTCGGTGGCCCTCTTTaGGGAGGTGGCTATAGACTT +
Preference number: 4 (lower is better)
Translates to: TLMVSATFTSSAVSSTTDLGGPL*GGGYRL
Trigger: AAGTCTATAGCCACCTCCGCAAAGAGGGCCACCGAG...GTCAGTGGTAGAACTGACAGCTGAAGAGGTGAAAGTGGCAGAGACCATCAAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR GCA 90 bp ACCAGCACACCCCTGGGAAGAGGAAGAATAAGGACAGAGGCCCTGAGGCAGGAGAGTCTTTCCATCGTCTaGATCTGTGAACTGTCCATT +
Preference number: 4 (lower is better)
Translates to: TSTPLGRGRIRTEALRQESLSIV*ICELSI
Trigger: AATGGACAGTTCACAGATGCAGACGATGGAAAGACT...CTCCTGCCTCAGGGCCTCTGTCCTTATTCTTCCTCTTCCCAGGGGTGTGCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR GCA 90 bp CCTCCTGCCTCAACACACCCAATCTTCTTAAGTGTGTCCAGAGTTGTAAAGGGCCGCAGCACTCTTCCATaGCAGCATCATCAGCGGGTA +
Preference number: 4 (lower is better)
Translates to: PPASTHPIFLSVSRVVKGRSTLP*QHHQRV
Trigger: TACCCGCTGATGATGCTGGCATGGAAGAGTGCTGCG...GCCCTTTACAACTCTGGACACACTTAAGAAGATTGGGTGTGTTGAGGCAGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR GCA 90 bp ACCAGCACACCCCTGGGAAGAGGAAGAATAAGGACAGAGGCCCTGAGGCAGGAGATACTCTGTACTATTTaGTCGCTGCAACACTCCATC +
Preference number: 4 (lower is better)
Translates to: TSTPLGRGRIRTEALRQEILCTI*SLQHSI
Trigger: GATGGAGTGTTGCAGCGAGCAAATAGTACAGAGTAT...CTCCTGCCTCAGGGCCTCTGTCCTTATTCTTCCTCTTCCCAGGGGTGTGCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR GCA 90 bp TTGAGGAGAGACCTGCAGGAAGTGAGCCAGCCAGCCATGAGGTTGTGTATGGACAATCCGTACAGAATGTaGGGGAGAGCTGTAGGAACT +
Preference number: 4 (lower is better)
Translates to: LRRDLQEVSQPAMRLCMDNPYRM*GRAVGT
Trigger: AGTTCCTACAGCTCTCCCGCACATTCTGTACGGATT...GTCCATACACAACCTCATGGCTGGCTGGCTCACTTCCTGCAGGTCTCTCCTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652515.1
CDS-3UTR CCA 90 bp CCTCCTGCCTCAACACACCCAATCTTCTTAAGTGTGTCCAGAGTTGTAAAGGGCTGTTGCCCCTTCTTCTaGCTGGGGTATACGAGGAGC +
Preference number: 4 (lower is better)
Translates to: PPASTHPIFLSVSRVVKGCCPFF*LGYTRS
Trigger: GCTCCTCGTATACCCCAGCCAGAAGAAGGGGCAACA...GCCCTTTACAACTCTGGACACACTTAAGAAGATTGGGTGTGTTGAGGCAGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR TCA 90 bp CCTGCTATGCCACCTGAGCCTGGAATGATGTTGATGACCCCCTTTGGAAAGCCTGGGTTCAACATCACATaGTCTCTGAAGAAGGATGGG +
Preference number: 4 (lower is better)
Translates to: PAMPPEPGMMLMTPFGKPGFNIT*SLKKDG
Trigger: CCCATCCTTCTTCAGAGATCATGTGATGTTGAACCC...AGGCTTTCCAAAGGGGGTCATCAACATCATTCCAGGCTCAGGTGGCATAGCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR TCA 90 bp ACCAGCACACCCCTGGGAAGAGGAAGAATAAGGACAGAGGCCCTGAGGCAGGAGCCTTGCAACACCTACTaGGATAGAGATTTGATTTTC +
Preference number: 4 (lower is better)
Translates to: TSTPLGRGRIRTEALRQEPCNTY*DRDLIF
Trigger: GAAAATCAAATCTCTATCTCAGTAGGTGTTGCAAGG...CTCCTGCCTCAGGGCCTCTGTCCTTATTCTTCCTCTTCCCAGGGGTGTGCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR TCA 90 bp ACCAGCACACCCCTGGGAAGAGGAAGAATAAGGACAGAGGCCCTGAGGCAGGAGGAAAATTTACTCACCTaGCTACTTCTGTCTGCCAAT +
Preference number: 4 (lower is better)
Translates to: TSTPLGRGRIRTEALRQEENLLT*LLLSAN
Trigger: ATTGGCAGACAGAAGTAGTCAGGTGAGTAAATTTTC...CTCCTGCCTCAGGGCCTCTGTCCTTATTCTTCCTCTTCCCAGGGGTGTGCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR TCA 90 bp TTGAGGAGAGACCTGCAGGAAGTGAGCCAGCCAGCCATGAGGTTGTGTATGGACGTGTCTCTCATCAGATaGTATTTGAGGAGAGACCTG +
Preference number: 4 (lower is better)
Translates to: LRRDLQEVSQPAMRLCMDVSLIR*YLRRDL
Trigger: CAGGTCTCTCCTCAAATATCATCTGATGAGAGACAC...GTCCATACACAACCTCATGGCTGGCTGGCTCACTTCCTGCAGGTCTCTCCTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR GCA 90 bp AGACCAGTTGGGAGACTTGAGCAAAATTGTAGGAAAGAGGTAACAGGCCAGGTGCTCGGTGGCCCTCTTTaGGGAGGTGGCTATAGACTT +
Preference number: 4 (lower is better)
Translates to: RPVGRLEQNCRKEVTGQVLGGPL*GGGYRL
Trigger: AAGTCTATAGCCACCTCCGCAAAGAGGGCCACCGAG...CACCTGGCCTGTTACCTCTTTCCTACAATTTTGCTCAAGTCTCCCAACTGGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR GCA 90 bp GAGACCAGGCTTCTTGGCACCTTTAATTTCCAGTGGTTCTCCAGGAGGCACAGAGATACCTTCATATGTTaGCCCTTCTTCTGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: ETRLLGTFNFQWFSRRHRDTFIC*PFFWLG
Trigger: CCCCAGCCAGAAGAAGGGGCAACATATGAAGGTATC...TCTGTGCCTCCTGGAGAACCACTGGAAATTAAAGGTGCCAAGAAGCCTGGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR GCA 90 bp ACCAGCACACCCCTGGGAAGAGGAAGAATAAGGACAGAGGCCCTGAGGCAGGAGTTTCCATCTTCAAACTaGAGATTTCTCACCGTCAGT +
Preference number: 4 (lower is better)
Translates to: TSTPLGRGRIRTEALRQEFPSSN*RFLTVS
Trigger: ACTGACGGTGAGAAATCTGCAGTTTGAAGATGGAAA...CTCCTGCCTCAGGGCCTCTGTCCTTATTCTTCCTCTTCCCAGGGGTGTGCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CCA 90 bp TTGAGGAGAGACCTGCAGGAAGTGAGCCAGCCAGCCATGAGGTTGTGTATGGACATCTCTGAAGAAGGATaGGTCCTGTATCCAAGCCAT +
Preference number: 4 (lower is better)
Translates to: LRRDLQEVSQPAMRLCMDISEEG*VLYPSH
Trigger: ATGGCTTGGATACAGGACCCATCCTTCTTCAGAGAT...GTCCATACACAACCTCATGGCTGGCTGGCTCACTTCCTGCAGGTCTCTCCTCAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CCA 90 bp TTGAGGAGAGACCTGCAGGAAGTGAGCCAGCCAGCCATGAGGTTGTGTATGGACACCTTTAATTTCCAGTaGTTCTCCAGGAGGCACAGA +
Preference number: 4 (lower is better)
Translates to: LRRDLQEVSQPAMRLCMDTFNFQ*FSRRHR
Trigger: TCTGTGCCTCCTGGAGAACCACTGGAAATTAAAGGT...GTCCATACACAACCTCATGGCTGGCTGGCTCACTTCCTGCAGGTCTCTCCTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CCA 90 bp ACCTTGATGGTCTCTGCCACTTTCACCTCTTCAGCTGTCAGTTCTACCACTGACGGTCAGATTGCGATTTaGACGGGCCTGGTTGATTGG +
Preference number: 4 (lower is better)
Translates to: TLMVSATFTSSAVSSTTDGQIAI*TGLVDW
Trigger: CCAATCAACCAGGCCCGTCCAAATCGCAATCTGACC...GTCAGTGGTAGAACTGACAGCTGAAGAGGTGAAAGTGGCAGAGACCATCAAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552270.1
3UTR CAA 72 bp GGAATAATAATGGCACAGACACCGAGTGGCTCTTTCTaGGTGAAGGTCAGATTGCGATTTGGACGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: GIIMAQTPSGSF*VKVRLRFGRAW
Trigger: CCAGGCCCGTCCAAATCGCAATCTGACCTTCACCAAGAAAGAGCCACTCGGTGTCTGTGCCATTATTATTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR TCA 90 bp CCTCCTGCCTCAACACACCCAATCTTCTTAAGTGTGTCCAGAGTTGTAAAGGGCTCCATGGGAATGAACTaGGTGCAGAAAGGGAGCACA +
Preference number: 4 (lower is better)
Translates to: PPASTHPIFLSVSRVVKGSMGMN*VQKGST
Trigger: TGTGCTCCCTTTCTGCACTCAGTTCATTCCCATGGA...GCCCTTTACAACTCTGGACACACTTAAGAAGATTGGGTGTGTTGAGGCAGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR TCA 90 bp CCTGCTATGCCACCTGAGCCTGGAATGATGTTGATGACCCCCTTTGGAAAGCCTCCAGGGACTTTATCATaGCCTCGAATCCAGTTATGT +
Preference number: 4 (lower is better)
Translates to: PAMPPEPGMMLMTPFGKPPGTLS*PRIQLC
Trigger: ACATAACTGGATTCGAGGTCATGATAAAGTCCCTGG...AGGCTTTCCAAAGGGGGTCATCAACATCATTCCAGGCTCAGGTGGCATAGCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR TCA 90 bp CCTGCTATGCCACCTGAGCCTGGAATGATGTTGATGACCCCCTTTGGAAAGCCTCCTGGCAACATCCATTaGGCTTGCTCCAGATTTAAA +
Preference number: 4 (lower is better)
Translates to: PAMPPEPGMMLMTPFGKPPGNIH*ACSRFK
Trigger: TTTAAATCTGGAGCAAGCTCAATGGATGTTGCCAGG...AGGCTTTCCAAAGGGGGTCATCAACATCATTCCAGGCTCAGGTGGCATAGCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR TCA 90 bp CCTCCTGCCTCAACACACCCAATCTTCTTAAGTGTGTCCAGAGTTGTAAAGGGCACCAGCTCCACCTCTTaGTCTTCTCCTCTCAGTTTC +
Preference number: 4 (lower is better)
Translates to: PPASTHPIFLSVSRVVKGTSSTS*SSPLSF
Trigger: GAAACTGAGAGGAGAAGATCAAGAGGTGGAGCTGGT...GCCCTTTACAACTCTGGACACACTTAAGAAGATTGGGTGTGTTGAGGCAGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR TCA 90 bp ACTTGCAGAATTGTGTGTGTGCACATGAATTTTGGGGGTAGAAGCGGGACACAGGCAGGCTTGTTCTGTTaGGGAAGTCAAGGCAGTCAG +
Preference number: 4 (lower is better)
Translates to: TCRIVCVHMNFGGRSGTQAGLFC*GSQGSQ
Trigger: CTGACTGCCTTGACTTCCTCAACAGAACAAGCCTGC...CTGTGTCCCGCTTCTACCCCCAAAATTCATGTGCACACACACAATTCTGCAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR GCA 90 bp ACCAGCACACCCCTGGGAAGAGGAAGAATAAGGACAGAGGCCCTGAGGCAGGAGAAACCGATTATAAAGTaGATCCACTGTATCATTGGG +
Preference number: 4 (lower is better)
Translates to: TSTPLGRGRIRTEALRQEKPIIK*IHCIIG
Trigger: CCCAATGATACAGTGGATGCACTTTATAATCGGTTT...CTCCTGCCTCAGGGCCTCTGTCCTTATTCTTCCTCTTCCCAGGGGTGTGCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR GCA 90 bp TTGAGGAGAGACCTGCAGGAAGTGAGCCAGCCAGCCATGAGGTTGTGTATGGACTTTTGCTGCTGCTACTaGTTTATCAACATCCGCCAA +
Preference number: 4 (lower is better)
Translates to: LRRDLQEVSQPAMRLCMDFCCCY*FINIRQ
Trigger: TTGGCGGATGTTGATAAAGCAGTAGCAGCAGCAAAA...GTCCATACACAACCTCATGGCTGGCTGGCTCACTTCCTGCAGGTCTCTCCTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR GCA 90 bp ACTTGCAGAATTGTGTGTGTGCACATGAATTTTGGGGGTAGAAGCGGGACACAGGAAGAGGCAGTGGTGTaGTGGTGCTGGCTTGCATTT +
Preference number: 4 (lower is better)
Translates to: TCRIVCVHMNFGGRSGTQEEAVV*WCWLAF
Trigger: AAATGCAAGCCAGCACCAGCACACCACTGCCTCTTC...CTGTGTCCCGCTTCTACCCCCAAAATTCATGTGCACACACACAATTCTGCAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CCA 90 bp TGCTTAAAGTGTCCACACCTCCCGATTCAGGTGATAATAAGATCACAGCTTCATACCCCTACTACTCGGTaGCCCTCTTTGCGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: CLKCPHLPIQVIIRSQLHTPTTR*PSLRRW
Trigger: CCACCTCCGCAAAGAGGGCCACCGAGTAGTAGGGGT...ATGAAGCTGTGATCTTATTATCACCTGAATCGGGAGGTGTGGACACTTTAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CCA 90 bp GATCTGTTTGCCAATAGGAGTGGATCCAGTGAAACCAAGTTTGCGGATGTCAGGGCCCCTTCTTCTGGCTaGGGTATACGAGGAGCTTTT +
Preference number: 4 (lower is better)
Translates to: DLFANRSGSSETKFADVRAPSSG*GIRGAF
Trigger: AAAAGCTCCTCGTATACCCCAGCCAGAAGAAGGGGC...CCTGACATCCGCAAACTTGGTTTCACTGGATCCACTCCTATTGGCAAACAGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR CCA 90 bp TGTTTGCCAATAGGAGTGGATCCAGTGAAACCAAGTTTGCGGATGTCAGGATGTTGTTGCCCCTTCTTCTaGCTGGGGTATACGAGGAGC +
Preference number: 4 (lower is better)
Translates to: CLPIGVDPVKPSLRMSGCCCPFF*LGYTRS
Trigger: GCTCCTCGTATACCCCAGCCAGAAGAAGGGGCAACA...ACATCCTGACATCCGCAAACTTGGTTTCACTGGATCCACTCCTATTGGCAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR CCA 90 bp ACCAGCACACCCCTGGGAAGAGGAAGAATAAGGACAGAGGCCCTGAGGCAGGAGGCATTTTCCTTTTTCTaGATACCTTCATATGTTGCC +
Preference number: 4 (lower is better)
Translates to: TSTPLGRGRIRTEALRQEAFSFF*IPSYVA
Trigger: GGCAACATATGAAGGTATCCAGAAAAAGGAAAATGC...CTCCTGCCTCAGGGCCTCTGTCCTTATTCTTCCTCTTCCCAGGGGTGTGCTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CCA 90 bp ACCTTGATGGTCTCTGCCACTTTCACCTCTTCAGCTGTCAGTTCTACCACTGACTTTAACTCCGCCAAATaGGGCCGCCACATCTGTCTT +
Preference number: 4 (lower is better)
Translates to: TLMVSATFTSSAVSSTTDFNSAK*GRHICL
Trigger: AAGACAGATGTGGCGGCCCCATTTGGCGGAGTTAAA...GTCAGTGGTAGAACTGACAGCTGAAGAGGTGAAAGTGGCAGAGACCATCAAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR TCA 90 bp CCTCCTGCCTCAACACACCCAATCTTCTTAAGTGTGTCCAGAGTTGTAAAGGGCGGGTTCAACATCACATaGTCTCTGAAGAAGGATGGG +
Preference number: 4 (lower is better)
Translates to: PPASTHPIFLSVSRVVKGGFNIT*SLKKDG
Trigger: CCCATCCTTCTTCAGAGATCATGTGATGTTGAACCC...GCCCTTTACAACTCTGGACACACTTAAGAAGATTGGGTGTGTTGAGGCAGGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR TCA 90 bp AGACCAGTTGGGAGACTTGAGCAAAATTGTAGGAAAGAGGTAACAGGCCAGGTGTCCTGCTATGCCACCTaGGCCTGGAATGATGTTGAT +
Preference number: 4 (lower is better)
Translates to: RPVGRLEQNCRKEVTGQVSCYAT*AWNDVD
Trigger: ATCAACATCATTCCAGGCTCAGGTGGCATAGCAGGA...CACCTGGCCTGTTACCTCTTTCCTACAATTTTGCTCAAGTCTCCCAACTGGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR GCA 90 bp CCTGCTATGCCACCTGAGCCTGGAATGATGTTGATGACCCCCTTTGGAAAGCCTAGTCTTTCCATCGTCTaGATCTGTGAACTGTCCATT +
Preference number: 4 (lower is better)
Translates to: PAMPPEPGMMLMTPFGKPSLSIV*ICELSI
Trigger: AATGGACAGTTCACAGATGCAGACGATGGAAAGACT...AGGCTTTCCAAAGGGGGTCATCAACATCATTCCAGGCTCAGGTGGCATAGCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR GCA 90 bp TTTAAACAGACGAGTGAAGTGACACTGTCTGACTTAAGCTTTGAACAGGACCGCCGCAGCACTCTTCCATaGCAGCATCATCAGCGGGTA +
Preference number: 4 (lower is better)
Translates to: FKQTSEVTLSDLSFEQDRRSTLP*QHHQRV
Trigger: TACCCGCTGATGATGCTGGCATGGAAGAGTGCTGCG...GCGGTCCTGTTCAAAGCTTAAGTCAGACAGTGTCACTTCACTCGTCTGTTTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR GCA 90 bp ACCAGCACACCCCTGGGAAGAGGAAGAATAAGGACAGAGGCCCTGAGGCAGGAGTTTTCCTTGTACTATTaGCATTTTTCATTGTGTGGC +
Preference number: 4 (lower is better)
Translates to: TSTPLGRGRIRTEALRQEFSLYY*HFSLCG
Trigger: GCCACACAATGAAAAATGGCAATAGTACAAGGAAAA...CTCCTGCCTCAGGGCCTCTGTCCTTATTCTTCCTCTTCCCAGGGGTGTGCTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR GCA 90 bp TTGAGGAGAGACCTGCAGGAAGTGAGCCAGCCAGCCATGAGGTTGTGTATGGACATTAGATTACTATCTTaGCCAAGATCACACAGCCAG +
Preference number: 4 (lower is better)
Translates to: LRRDLQEVSQPAMRLCMDIRLLS*PRSHSQ
Trigger: CTGGCTGTGTGATCTTGGGCAAGATAGTAATCTAAT...GTCCATACACAACCTCATGGCTGGCTGGCTCACTTCCTGCAGGTCTCTCCTCAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CCA 90 bp ACTTGCAGAATTGTGTGTGTGCACATGAATTTTGGGGGTAGAAGCGGGACACAGCCTGGGCAGGATGGATaGGTGATAAATGATAGAGCC +
Preference number: 4 (lower is better)
Translates to: TCRIVCVHMNFGGRSGTQPGQDG*VINDRA
Trigger: GGCTCTATCATTTATCACCCATCCATCCTGCCCAGG...CTGTGTCCCGCTTCTACCCCCAAAATTCATGTGCACACACACAATTCTGCAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CCA 90 bp ACTTGTCTTCCCCCGTACACCAAAGTGGCCCCTTCTTTCACTCCAGTTTCACAGACCTTTAATTTCCAGTaGTTCTCCAGGAGGCACAGA +
Preference number: 4 (lower is better)
Translates to: TCLPPYTKVAPSFTPVSQTFNFQ*FSRRHR
Trigger: TCTGTGCCTCCTGGAGAACCACTGGAAATTAAAGGT...CTGTGAAACTGGAGTGAAAGAAGGGGCCACTTTGGTGTACGGGGGAAGACAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR CCA 90 bp TTGAGGAGAGACCTGCAGGAAGTGAGCCAGCCAGCCATGAGGTTGTGTATGGACAGCCTTCAAACTTGGTaGCCATATAGACATCTTCAT +
Preference number: 4 (lower is better)
Translates to: LRRDLQEVSQPAMRLCMDSLQTW*PYRHLH
Trigger: ATGAAGATGTCTATATGGCCACCAAGTTTGAAGGCT...GTCCATACACAACCTCATGGCTGGCTGGCTCACTTCCTGCAGGTCTCTCCTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CCA 90 bp TTGAGGAGAGACCTGCAGGAAGTGAGCCAGCCAGCCATGAGGTTGTGTATGGACTGTAGATCCATCTGTTaGGTTGATAGTGTCGTAAGT +
Preference number: 4 (lower is better)
Translates to: LRRDLQEVSQPAMRLCMDCRSIC*VDSVVS
Trigger: ACTTACGACACTATCAACCCAACAGATGGATCTACA...GTCCATACACAACCTCATGGCTGGCTGGCTCACTTCCTGCAGGTCTCTCCTCAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CCA 90 bp ACTTGCAGAATTGTGTGTGTGCACATGAATTTTGGGGGTAGAAGCGGGACACAGAAAAAGCCTGGCCTTTaGACTTGTCTTCCCCCGTAC +
Preference number: 4 (lower is better)
Translates to: TCRIVCVHMNFGGRSGTQKKPGL*TCLPPY
Trigger: GTACGGGGGAAGACAAGTCCAAAGGCCAGGCTTTTT...CTGTGTCCCGCTTCTACCCCCAAAATTCATGTGCACACACACAATTCTGCAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CCA 90 bp ACTTGCAGAATTGTGTGTGTGCACATGAATTTTGGGGGTAGAAGCGGGACACAGTGCTTTAACATGGCCTaGCCCTCTTCATGGTCCATC +
Preference number: 4 (lower is better)
Translates to: TCRIVCVHMNFGGRSGTQCFNMA*PSSWSI
Trigger: GATGGACCATGAAGAGGGCCAGGCCATGTTAAAGCA...CTGTGTCCCGCTTCTACCCCCAAAATTCATGTGCACACACACAATTCTGCAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CCA 90 bp CCTCCTGCCTCAACACACCCAATCTTCTTAAGTGTGTCCAGAGTTGTAAAGGGCGCAAAGGCATGGGGATaGGGAATTAGAAGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: PPASTHPIFLSVSRVVKGAKAWG*GIRRKV
Trigger: CACTTTCCTTCTAATTCCCCATCCCCATGCCTTTGC...GCCCTTTACAACTCTGGACACACTTAAGAAGATTGGGTGTGTTGAGGCAGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CCA 90 bp CCTCCTGCCTCAACACACCCAATCTTCTTAAGTGTGTCCAGAGTTGTAAAGGGCAAGAATGACAGCAGATaGGGTATGAATGTGGGGGCA +
Preference number: 4 (lower is better)
Translates to: PPASTHPIFLSVSRVVKGKNDSR*GMNVGA
Trigger: TGCCCCCACATTCATACCCCATCTGCTGTCATTCTT...GCCCTTTACAACTCTGGACACACTTAAGAAGATTGGGTGTGTTGAGGCAGGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CCA 90 bp TTTAAACAGACGAGTGAAGTGACACTGTCTGACTTAAGCTTTGAACAGGACCGCGGGAAACAGGCTTGTTaGAAGAAGCGCCTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: FKQTSEVTLSDLSFEQDRGKQAC*KKRLVS
Trigger: GCTGACCAGGCGCTTCTTCCAACAAGCCTGTTTCCC...GCGGTCCTGTTCAAAGCTTAAGTCAGACAGTGTCACTTCACTCGTCTGTTTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652515.1
CDS-3UTR TCA 90 bp CTGACGTCTCACCCGTTGAAAAGTACTGAGAGGCAGGGATCATTTTTCCATCTTACCAGCTCCACCTCTTaGTCTTCTCCTCTCAGTTTC +
Preference number: 4 (lower is better)
Translates to: LTSHPLKSTERQGSFFHLTSSTS*SSPLSF
Trigger: GAAACTGAGAGGAGAAGATCAAGAGGTGGAGCTGGT...AAGATGGAAAAATGATCCCTGCCTCTCAGTACTTTTCAACGGGTGAGACGTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR TCA 90 bp TTGAGGAGAGACCTGCAGGAAGTGAGCCAGCCAGCCATGAGGTTGTGTATGGACCTTACATTACTGCAATaGATTCTCCTATTAAGGGTC +
Preference number: 4 (lower is better)
Translates to: LRRDLQEVSQPAMRLCMDLTLLQ*ILLLRV
Trigger: GACCCTTAATAGGAGAATTCATTGCAGTAATGTAAG...GTCCATACACAACCTCATGGCTGGCTGGCTCACTTCCTGCAGGTCTCTCCTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR TCA 90 bp TTGAGGAGAGACCTGCAGGAAGTGAGCCAGCCAGCCATGAGGTTGTGTATGGACATATCGTATTATTATTaGCAGAAGGCCCATACTGGA +
Preference number: 4 (lower is better)
Translates to: LRRDLQEVSQPAMRLCMDISYYY*QKAHTG
Trigger: TCCAGTATGGGCCTTCTGTCAATAATAATACGATAT...GTCCATACACAACCTCATGGCTGGCTGGCTCACTTCCTGCAGGTCTCTCCTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR TCA 90 bp TTTAAACAGACGAGTGAAGTGACACTGTCTGACTTAAGCTTTGAACAGGACCGCGCAGGCTTGTTCTGTTaGGGAAGTCAAGGCAGTCAG +
Preference number: 4 (lower is better)
Translates to: FKQTSEVTLSDLSFEQDRAGLFC*GSQGSQ
Trigger: CTGACTGCCTTGACTTCCTCAACAGAACAAGCCTGC...GCGGTCCTGTTCAAAGCTTAAGTCAGACAGTGTCACTTCACTCGTCTGTTTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR TCA 90 bp TGCTTAAAGTGTCCACACCTCCCGATTCAGGTGATAATAAGATCACAGCTTCATACAGCAGATGGGGTATaGATGTGGGGGCATATGGCC +
Preference number: 4 (lower is better)
Translates to: CLKCPHLPIQVIIRSQLHTADGV*MWGHMA
Trigger: GGCCATATGCCCCCACATTCATACCCCATCTGCTGT...ATGAAGCTGTGATCTTATTATCACCTGAATCGGGAGGTGTGGACACTTTAAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR TCA 90 bp TTGAGGAGAGACCTGCAGGAAGTGAGCCAGCCAGCCATGAGGTTGTGTATGGACCTTAACCTCTCCATTTaGAAGCAAACATTTATTGGG +
Preference number: 4 (lower is better)
Translates to: LRRDLQEVSQPAMRLCMDLNLSI*KQTFIG
Trigger: CCCAATAAATGTTTGCTTTCAAATGGAGAGGTTAAG...GTCCATACACAACCTCATGGCTGGCTGGCTCACTTCCTGCAGGTCTCTCCTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR GCA 90 bp TGCTTAAAGTGTCCACACCTCCCGATTCAGGTGATAATAAGATCACAGCTTCATCTCGGTGGCCCTCTTTaGGGAGGTGGCTATAGACTT +
Preference number: 4 (lower is better)
Translates to: CLKCPHLPIQVIIRSQLHLGGPL*GGGYRL
Trigger: AAGTCTATAGCCACCTCCGCAAAGAGGGCCACCGAG...ATGAAGCTGTGATCTTATTATCACCTGAATCGGGAGGTGTGGACACTTTAAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR GCA 90 bp GAGACCAGGCTTCTTGGCACCTTTAATTTCCAGTGGTTCTCCAGGAGGCACAGATTTTGCTGCTGCTACTaGTTTATCAACATCCGCCAA +
Preference number: 4 (lower is better)
Translates to: ETRLLGTFNFQWFSRRHRFCCCY*FINIRQ
Trigger: TTGGCGGATGTTGATAAAGCAGTAGCAGCAGCAAAA...TCTGTGCCTCCTGGAGAACCACTGGAAATTAAAGGTGCCAAGAAGCCTGGTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR GCA 90 bp TTGAGGAGAGACCTGCAGGAAGTGAGCCAGCCAGCCATGAGGTTGTGTATGGACTTCAAAAGCATCTTTTaGTGCTGCTACTGCTTTATC +
Preference number: 4 (lower is better)
Translates to: LRRDLQEVSQPAMRLCMDFKSIF*CCYCFI
Trigger: GATAAAGCAGTAGCAGCAGCAAAAGATGCTTTTGAA...GTCCATACACAACCTCATGGCTGGCTGGCTCACTTCCTGCAGGTCTCTCCTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR GCA 90 bp CCACCACATTTCTGTCTGATCTCTTCAACCAGCCTGGCAACATCCATTGAGCTTGTACTATTTGCTCGCTaGAACACTCCATCGATGTCC +
Preference number: 4 (lower is better)
Translates to: PPHFCLISSTSLATSIELVLFAR*NTPSMS
Trigger: GGACATCGATGGAGTGTTGCAGCGAGCAAATAGTAC...AAGCTCAATGGATGTTGCCAGGCTGGTTGAAGAGATCAGACAGAAATGTGGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR CCA 90 bp ATTCTGCCAAGTCTCCAAAATGACAAATATTCCCTAAGGCTTCTTCAAAGCCAAAATAAACCCGGCCAGTaGAGAAGCGCCGGAGCGCCT +
Preference number: 4 (lower is better)
Translates to: ILPSLQNDKYSLRLLQSQNKPGQ*RSAGAP
Trigger: AGGCGCTCCGGCGCTTCTCCACTGGCCGGGTTTATT...TTGGCTTTGAAGAAGCCTTAGGGAATATTTGTCATTTTGGAGACTTGGCAGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258494.14
CDS-3UTR CCA 90 bp TGGCTTGCATTTGTTCTGATGGCATGCATCTCTTCCCAAACTCTGTATTCAGTGGCCCCTTCTTCTGGCTaGGGTATACGAGGAGCTTTT +
Preference number: 4 (lower is better)
Translates to: WLAFVLMACISSQTLYSVAPSSG*GIRGAF
Trigger: AAAAGCTCCTCGTATACCCCAGCCAGAAGAAGGGGC...CACTGAATACAGAGTTTGGGAAGAGATGCATGCCATCAGAACAAATGCAAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CCA 90 bp CCTCCTGCCTCAACACACCCAATCTTCTTAAGTGTGTCCAGAGTTGTAAAGGGCAAAACTTCGGCAGACTaGTCCCAAGAAATCTCAGCA +
Preference number: 4 (lower is better)
Translates to: PPASTHPIFLSVSRVVKGKTSAD*SQEISA
Trigger: TGCTGAGATTTCTTGGGACCAGTCTGCCGAAGTTTT...GCCCTTTACAACTCTGGACACACTTAAGAAGATTGGGTGTGTTGAGGCAGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CCA 90 bp ACTTGCAGAATTGTGTGTGTGCACATGAATTTTGGGGGTAGAAGCGGGACACAGTCTCTTCAACCAGCCTaGCAACATCCATTGAGCTTG +
Preference number: 4 (lower is better)
Translates to: TCRIVCVHMNFGGRSGTQSLQPA*QHPLSL
Trigger: CAAGCTCAATGGATGTTGCCAGGCTGGTTGAAGAGA...CTGTGTCCCGCTTCTACCCCCAAAATTCATGTGCACACACACAATTCTGCAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CCA 90 bp AGACCAGTTGGGAGACTTGAGCAAAATTGTAGGAAAGAGGTAACAGGCCAGGTGGTTGCCAGCTCTTCTTaGTTCTCTTCCAGTAGGTCT +
Preference number: 4 (lower is better)
Translates to: RPVGRLEQNCRKEVTGQVVASSS*FSSSRS
Trigger: AGACCTACTGGAAGAGAACCAAGAAGAGCTGGCAAC...CACCTGGCCTGTTACCTCTTTCCTACAATTTTGCTCAAGTCTCCCAACTGGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CCA 90 bp ACCTTGATGGTCTCTGCCACTTTCACCTCTTCAGCTGTCAGTTCTACCACTGACACGGGCCTGGTTGATTaGAATAGTAGAACCCTGAAT +
Preference number: 4 (lower is better)
Translates to: TLMVSATFTSSAVSSTTDTGLVD*NSRTLN
Trigger: ATTCAGGGTTCTACTATTCCAATCAACCAGGCCCGT...GTCAGTGGTAGAACTGACAGCTGAAGAGGTGAAAGTGGCAGAGACCATCAAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR CCA 90 bp TGGCTTGCATTTGTTCTGATGGCATGCATCTCTTCCCAAACTCTGTATTCAGTGGGTCAGATTGCGATTTaGACGGGCCTGGTTGATTGG +
Preference number: 4 (lower is better)
Translates to: WLAFVLMACISSQTLYSVGQIAI*TGLVDW
Trigger: CCAATCAACCAGGCCCGTCCAAATCGCAATCTGACC...CACTGAATACAGAGTTTGGGAAGAGATGCATGCCATCAGAACAAATGCAAGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CCA 90 bp TTTAAACAGACGAGTGAAGTGACACTGTCTGACTTAAGCTTTGAACAGGACCGCGGCACAGACACCGAGTaGCTCTTTCTTGGTGAAGGT +
Preference number: 4 (lower is better)
Translates to: FKQTSEVTLSDLSFEQDRGTDTE*LFLGEG
Trigger: ACCTTCACCAAGAAAGAGCCACTCGGTGTCTGTGCC...GCGGTCCTGTTCAAAGCTTAAGTCAGACAGTGTCACTTCACTCGTCTGTTTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CCA 90 bp CCTCCTGCCTCAACACACCCAATCTTCTTAAGTGTGTCCAGAGTTGTAAAGGGCCAAATTCGTCGTGGATaGATTCTTCCACGAACAACC +
Preference number: 4 (lower is better)
Translates to: PPASTHPIFLSVSRVVKGQIRRG*ILPRTT
Trigger: GGTTGTTCGTGGAAGAATCCATCCACGACGAATTTG...GCCCTTTACAACTCTGGACACACTTAAGAAGATTGGGTGTGTTGAGGCAGGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CCA 90 bp TTGAGGAGAGACCTGCAGGAAGTGAGCCAGCCAGCCATGAGGTTGTGTATGGACAGTGGATCTGTCAAGTaGATCACCAATTTTCATCTT +
Preference number: 4 (lower is better)
Translates to: LRRDLQEVSQPAMRLCMDSGSVK*ITNFHL
Trigger: AAGATGAAAATTGGTGATCCACTTGACAGATCCACT...GTCCATACACAACCTCATGGCTGGCTGGCTCACTTCCTGCAGGTCTCTCCTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CCA 90 bp TGCTTAAAGTGTCCACACCTCCCGATTCAGGTGATAATAAGATCACAGCTTCATCCCCGTACACCAAAGTaGCCCCTTCTTTCACTCCAG +
Preference number: 4 (lower is better)
Translates to: CLKCPHLPIQVIIRSQLHPRTPK*PLLSLQ
Trigger: CTGGAGTGAAAGAAGGGGCCACTTTGGTGTACGGGG...ATGAAGCTGTGATCTTATTATCACCTGAATCGGGAGGTGTGGACACTTTAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CCA 90 bp ACTTGCAGAATTGTGTGTGTGCACATGAATTTTGGGGGTAGAAGCGGGACACAGCTCCATGAAAAAGCCTaGCCTTTGGACTTGTCTTCC +
Preference number: 4 (lower is better)
Translates to: TCRIVCVHMNFGGRSGTQLHEKA*PLDLSS
Trigger: GGAAGACAAGTCCAAAGGCCAGGCTTTTTCATGGAG...CTGTGTCCCGCTTCTACCCCCAAAATTCATGTGCACACACACAATTCTGCAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CCA 90 bp CCACCACATTTCTGTCTGATCTCTTCAACCAGCCTGGCAACATCCATTGAGCTTCTCCATGAAAAAGCCTaGCCTTTGGACTTGTCTTCC +
Preference number: 4 (lower is better)
Translates to: PPHFCLISSTSLATSIELLHEKA*PLDLSS
Trigger: GGAAGACAAGTCCAAAGGCCAGGCTTTTTCATGGAG...AAGCTCAATGGATGTTGCCAGGCTGGTTGAAGAGATCAGACAGAAATGTGGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR CCA 90 bp TTGAGGAGAGACCTGCAGGAAGTGAGCCAGCCAGCCATGAGGTTGTGTATGGACGAATTAGAAGGAAAGTaGAACTGCTTAAAGTGTCCA +
Preference number: 4 (lower is better)
Translates to: LRRDLQEVSQPAMRLCMDELEGK*NCLKCP
Trigger: TGGACACTTTAAGCAGTTCCACTTTCCTTCTAATTC...GTCCATACACAACCTCATGGCTGGCTGGCTCACTTCCTGCAGGTCTCTCCTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CCA 90 bp TGGCTTGCATTTGTTCTGATGGCATGCATCTCTTCCCAAACTCTGTATTCAGTGGAGGCAGTGGTGTGCTaGTGCTGGCTTGCATTTGTT +
Preference number: 4 (lower is better)
Translates to: WLAFVLMACISSQTLYSVEAVVC*CWLAFV
Trigger: AACAAATGCAAGCCAGCACCAGCACACCACTGCCTC...CACTGAATACAGAGTTTGGGAAGAGATGCATGCCATCAGAACAAATGCAAGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CCA 90 bp CCTCCTGCCTCAACACACCCAATCTTCTTAAGTGTGTCCAGAGTTGTAAAGGGCACAGCTTTATTTTCTTaGAGGGCAGGTATGGGGAAC +
Preference number: 4 (lower is better)
Translates to: PPASTHPIFLSVSRVVKGTALFS*RAGMGN
Trigger: GTTCCCCATACCTGCCCTCCAAGAAAATAAAGCTGT...GCCCTTTACAACTCTGGACACACTTAAGAAGATTGGGTGTGTTGAGGCAGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CCA 90 bp CCACCACATTTCTGTCTGATCTCTTCAACCAGCCTGGCAACATCCATTGAGCTTGGGGCCCATGATCAGTaGATCACTCTTGTCACAAAT +
Preference number: 4 (lower is better)
Translates to: PPHFCLISSTSLATSIELGAHDQ*ITLVTN
Trigger: ATTTGTGACAAGAGTGATCCACTGATCATGGGCCCC...AAGCTCAATGGATGTTGCCAGGCTGGTTGAAGAGATCAGACAGAAATGTGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR CCA 90 bp ATTCTGCCAAGTCTCCAAAATGACAAATATTCCCTAAGGCTTCTTCAAAGCCAAGAGAAGCACAGTGAATaGTGGCGAAGCCCGAGCCGG +
Preference number: 4 (lower is better)
Translates to: ILPSLQNDKYSLRLLQSQEKHSE*WRSPSR
Trigger: CCGGCTCGGGCTTCGCCACCATTCACTGTGCTTCTC...TTGGCTTTGAAGAAGCCTTAGGGAATATTTGTCATTTTGGAGACTTGGCAGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652515.1
CDS-3UTR TCA 90 bp TGGAATTTAGAAATGACCATAATAGGCCCAAAGGATTCCTCTTTGGCGAGGTACCCTTGTCTGGAACTGTaGACACCCCTACTACTCGGT +
Preference number: 4 (lower is better)
Translates to: WNLEMTIIGPKDSSLARYPCLEL*TPLLLG
Trigger: ACCGAGTAGTAGGGGTGTTCACAGTTCCAGACAAGG...GTACCTCGCCAAAGAGGAATCCTTTGGGCCTATTATGGTCATTTCTAAATTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR TCA 90 bp CCTCCTGCCTCAACACACCCAATCTTCTTAAGTGTGTCCAGAGTTGTAAAGGGCTCGAGCCATAGAAAGTaGCCATCTGTCCATTTATCT +
Preference number: 4 (lower is better)
Translates to: PPASTHPIFLSVSRVVKGSSHRK*PSVHLS
Trigger: AGATAAATGGACAGATGGTCACTTTCTATGGCTCGA...GCCCTTTACAACTCTGGACACACTTAAGAAGATTGGGTGTGTTGAGGCAGGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR TCA 90 bp ACTTGCAGAATTGTGTGTGTGCACATGAATTTTGGGGGTAGAAGCGGGACACAGCCTGGCAACATCCATTaGGCTTGCTCCAGATTTAAA +
Preference number: 4 (lower is better)
Translates to: TCRIVCVHMNFGGRSGTQPGNIH*ACSRFK
Trigger: TTTAAATCTGGAGCAAGCTCAATGGATGTTGCCAGG...CTGTGTCCCGCTTCTACCCCCAAAATTCATGTGCACACACACAATTCTGCAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR TCA 90 bp ACTTGCAGAATTGTGTGTGTGCACATGAATTTTGGGGGTAGAAGCGGGACACAGTCTTCATTCTGCAACTaGAGCCCACCACATTTCTGT +
Preference number: 4 (lower is better)
Translates to: TCRIVCVHMNFGGRSGTQSSFCN*SPPHFC
Trigger: ACAGAAATGTGGTGGGCTTCAGTTGCAGAATGAAGA...CTGTGTCCCGCTTCTACCCCCAAAATTCATGTGCACACACACAATTCTGCAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR TCA 90 bp TGGCTTGCATTTGTTCTGATGGCATGCATCTCTTCCCAAACTCTGTATTCAGTGACCAGCTCCACCTCTTaGTCTTCTCCTCTCAGTTTC +
Preference number: 4 (lower is better)
Translates to: WLAFVLMACISSQTLYSVTSSTS*SSPLSF
Trigger: GAAACTGAGAGGAGAAGATCAAGAGGTGGAGCTGGT...CACTGAATACAGAGTTTGGGAAGAGATGCATGCCATCAGAACAAATGCAAGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR TCA 90 bp CTGACGTCTCACCCGTTGAAAAGTACTGAGAGGCAGGGATCATTTTTCCATCTTGGTATAGACAGCCCCTaGATCAAGGGCTTCAATAGT +
Preference number: 4 (lower is better)
Translates to: LTSHPLKSTERQGSFFHLGIDSP*IKGFNS
Trigger: ACTATTGAAGCCCTTGATTCAGGGGCTGTCTATACC...AAGATGGAAAAATGATCCCTGCCTCTCAGTACTTTTCAACGGGTGAGACGTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR TCA 90 bp TGGCTTGCATTTGTTCTGATGGCATGCATCTCTTCCCAAACTCTGTATTCAGTGTCCTGCTATGCCACCTaGGCCTGGAATGATGTTGAT +
Preference number: 4 (lower is better)
Translates to: WLAFVLMACISSQTLYSVSCYAT*AWNDVD
Trigger: ATCAACATCATTCCAGGCTCAGGTGGCATAGCAGGA...CACTGAATACAGAGTTTGGGAAGAGATGCATGCCATCAGAACAAATGCAAGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR TCA 90 bp TGCTACTGCTTTATCAACATCCGCCAAAGAAGCGTAGGATACTTTGCATATTGTACACGGTCGGCTCCATaGAAAAGCCTGGCCTTTGGA +
Preference number: 4 (lower is better)
Translates to: CYCFINIRQRSVGYFAYCTRSAP*KSLAFG
Trigger: TCCAAAGGCCAGGCTTTTTCATGGAGCCGACCGTGT...ACAATATGCAAAGTATCCTACGCTTCTTTGGCGGATGTTGATAAAGCAGTAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR TCA 90 bp AGACCAGTTGGGAGACTTGAGCAAAATTGTAGGAAAGAGGTAACAGGCCAGGTGTCTTGTAAAAACCCCTaGGGCCAAACCATACTCTGT +
Preference number: 4 (lower is better)
Translates to: RPVGRLEQNCRKEVTGQVSCKNP*GQTILC
Trigger: ACAGAGTATGGTTTGGCCTCAGGGGTTTTTACAAGA...CACCTGGCCTGTTACCTCTTTCCTACAATTTTGCTCAAGTCTCCCAACTGGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR TCA 90 bp ACTTGCAGAATTGTGTGTGTGCACATGAATTTTGGGGGTAGAAGCGGGACACAGACCAGATGCATTGCTTaGAAACCTGTTCTGCCACTT +
Preference number: 4 (lower is better)
Translates to: TCRIVCVHMNFGGRSGTQTRCIA*KPVLPL
Trigger: AAGTGGCAGAACAGGTTTTCAAGCAATGCATCTGGT...CTGTGTCCCGCTTCTACCCCCAAAATTCATGTGCACACACACAATTCTGCAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR GCA 90 bp TGTTGTTTAGTTTTTATTGATTCCCTACAATCCCCTCATGTTATTCTGCCAAGTGCAGAGGCTCCTCTGTaGCTGGGCAGGATGGATGGG +
Preference number: 4 (lower is better)
Translates to: CCLVFIDSLQSPHVILPSAEAPL*LGRMDG
Trigger: CCCATCCATCCTGCCCAGGCACAGAGGAGCCTCTGC...ACTTGGCAGAATAACATGAGGGGATTGTAGGGAATCAATAAAAACTAAACAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR GCA 90 bp AGACCAGTTGGGAGACTTGAGCAAAATTGTAGGAAAGAGGTAACAGGCCAGGTGAAGGGCTTCAATAGTTaGCAGCTCTTCTTGGTTCTC +
Preference number: 4 (lower is better)
Translates to: RPVGRLEQNCRKEVTGQVKGFNS*QLFLVL
Trigger: GAGAACCAAGAAGAGCTGGCAACTATTGAAGCCCTT...CACCTGGCCTGTTACCTCTTTCCTACAATTTTGCTCAAGTCTCCCAACTGGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR GCA 90 bp ACCTTGATGGTCTCTGCCACTTTCACCTCTTCAGCTGTCAGTTCTACCACTGACATACTCTGTACTATTTaGTCGCTGCAACACTCCATC +
Preference number: 4 (lower is better)
Translates to: TLMVSATFTSSAVSSTTDILCTI*SLQHSI
Trigger: GATGGAGTGTTGCAGCGAGCAAATAGTACAGAGTAT...GTCAGTGGTAGAACTGACAGCTGAAGAGGTGAAAGTGGCAGAGACCATCAAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR GCA 90 bp AGACCAGTTGGGAGACTTGAGCAAAATTGTAGGAAAGAGGTAACAGGCCAGGTGGGCATTTTTCAGTGCTaGTGTATCAGGCATTGTGTC +
Preference number: 4 (lower is better)
Translates to: RPVGRLEQNCRKEVTGQVGIFQC*CIRHCV
Trigger: GACACAATGCCTGATACAGCAGCACTGAAAAATGCC...CACCTGGCCTGTTACCTCTTTCCTACAATTTTGCTCAAGTCTCCCAACTGGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR GCA 90 bp CCTCCTGCCTCAACACACCCAATCTTCTTAAGTGTGTCCAGAGTTGTAAAGGGCTGTGGCATTTTTCAGTaGTGCTGTATCAGGCATTGT +
Preference number: 4 (lower is better)
Translates to: PPASTHPIFLSVSRVVKGCGIFQ*CCIRHC
Trigger: ACAATGCCTGATACAGCAGCACTGAAAAATGCCACA...GCCCTTTACAACTCTGGACACACTTAAGAAGATTGGGTGTGTTGAGGCAGGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR GCA 90 bp CCTCCTGCCTCAACACACCCAATCTTCTTAAGTGTGTCCAGAGTTGTAAAGGGCCCCCTCATGTTATTCTaGCAAGTCTCCAAAATGACA +
Preference number: 4 (lower is better)
Translates to: PPASTHPIFLSVSRVVKGPLMLF*QVSKMT
Trigger: TGTCATTTTGGAGACTTGGCAGAATAACATGAGGGG...GCCCTTTACAACTCTGGACACACTTAAGAAGATTGGGTGTGTTGAGGCAGGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR GCA 90 bp TGGCTTGCATTTGTTCTGATGGCATGCATCTCTTCCCAAACTCTGTATTCAGTGGTGCTGGTGCTGGCTTaGATTTGTTCTGATGGCATG +
Preference number: 4 (lower is better)
Translates to: WLAFVLMACISSQTLYSVVLVLA*ICSDGM
Trigger: CATGCCATCAGAACAAATGCAAGCCAGCACCAGCAC...CACTGAATACAGAGTTTGGGAAGAGATGCATGCCATCAGAACAAATGCAAGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CCA 90 bp GATCTGTTTGCCAATAGGAGTGGATCCAGTGAAACCAAGTTTGCGGATGTCAGGATCTCTGAAGAAGGATaGGTCCTGTATCCAAGCCAT +
Preference number: 4 (lower is better)
Translates to: DLFANRSGSSETKFADVRISEEG*VLYPSH
Trigger: ATGGCTTGGATACAGGACCCATCCTTCTTCAGAGAT...CCTGACATCCGCAAACTTGGTTTCACTGGATCCACTCCTATTGGCAAACAGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR CCA 90 bp GAGACCAGGCTTCTTGGCACCTTTAATTTCCAGTGGTTCTCCAGGAGGCACAGATTCCTCACGACCTTTTaGATAAAGCCTTCAAACTTG +
Preference number: 4 (lower is better)
Translates to: ETRLLGTFNFQWFSRRHRFLTTF*IKPSNL
Trigger: CAAGTTTGAAGGCTTTATCCAAAAGGTCGTGAGGAA...TCTGTGCCTCCTGGAGAACCACTGGAAATTAAAGGTGCCAAGAAGCCTGGTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR CCA 90 bp ACTTGCAGAATTGTGTGTGTGCACATGAATTTTGGGGGTAGAAGCGGGACACAGCGATTTGGACGGGCCTaGTTGATTGGAATAGTAGAA +
Preference number: 4 (lower is better)
Translates to: TCRIVCVHMNFGGRSGTQRFGRA*LIGIVE
Trigger: TTCTACTATTCCAATCAACCAGGCCCGTCCAAATCG...CTGTGTCCCGCTTCTACCCCCAAAATTCATGTGCACACACACAATTCTGCAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CCA 90 bp TCGTTACCAAAAAGAACAAGTCCATTTTTGGTAACGAGACCAGGCTTCTTGGCAGGCACAGACACCGAGTaGCTCTTTCTTGGTGAAGGT +
Preference number: 4 (lower is better)
Translates to: SLPKRTSPFLVTRPGFLAGTDTE*LFLGEG
Trigger: ACCTTCACCAAGAAAGAGCCACTCGGTGTCTGTGCC...TGCCAAGAAGCCTGGTCTCGTTACCAAAAATGGACTTGTTCTTTTTGGTAACGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR CCA 90 bp TGCTTAAAGTGTCCACACCTCCCGATTCAGGTGATAATAAGATCACAGCTTCATGGCACAGACACCGAGTaGCTCTTTCTTGGTGAAGGT +
Preference number: 4 (lower is better)
Translates to: CLKCPHLPIQVIIRSQLHGTDTE*LFLGEG
Trigger: ACCTTCACCAAGAAAGAGCCACTCGGTGTCTGTGCC...ATGAAGCTGTGATCTTATTATCACCTGAATCGGGAGGTGTGGACACTTTAAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CCA 90 bp TTGAGGAGAGACCTGCAGGAAGTGAGCCAGCCAGCCATGAGGTTGTGTATGGACATTAAATATTATAAGTaGAGACTTGCCACCAAGCTC +
Preference number: 4 (lower is better)
Translates to: LRRDLQEVSQPAMRLCMDIKYYK*RLATKL
Trigger: GAGCTTGGTGGCAAGTCTCCACTTATAATATTTAAT...GTCCATACACAACCTCATGGCTGGCTGGCTCACTTCCTGCAGGTCTCTCCTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CCA 90 bp TTTAAACAGACGAGTGAAGTGACACTGTCTGACTTAAGCTTTGAACAGGACCGCTTTAACTCCGCCAAATaGGGCCGCCACATCTGTCTT +
Preference number: 4 (lower is better)
Translates to: FKQTSEVTLSDLSFEQDRFNSAK*GRHICL
Trigger: AAGACAGATGTGGCGGCCCCATTTGGCGGAGTTAAA...GCGGTCCTGTTCAAAGCTTAAGTCAGACAGTGTCACTTCACTCGTCTGTTTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CCA 90 bp CCTCCTGCCTCAACACACCCAATCTTCTTAAGTGTGTCCAGAGTTGTAAAGGGCTTGGTCTACGTGAAATaGGGGCCATTGAAAGGTTTT +
Preference number: 4 (lower is better)
Translates to: PPASTHPIFLSVSRVVKGLVYVK*GPLKGF
Trigger: AAAACCTTTCAATGGCCCCCATTTCACGTAGACCAA...GCCCTTTACAACTCTGGACACACTTAAGAAGATTGGGTGTGTTGAGGCAGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CCA 90 bp ACTTGCAGAATTGTGTGTGTGCACATGAATTTTGGGGGTAGAAGCGGGACACAGACAGCTTTATTTTCTTaGAGGGCAGGTATGGGGAAC +
Preference number: 4 (lower is better)
Translates to: TCRIVCVHMNFGGRSGTQTALFS*RAGMGN
Trigger: GTTCCCCATACCTGCCCTCCAAGAAAATAAAGCTGT...CTGTGTCCCGCTTCTACCCCCAAAATTCATGTGCACACACACAATTCTGCAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR CAA 72 bp AGAACAAGTCCATTTTTGGTAACGAGACCAGGCTTCTaGGCACCTTTAATTTCCAGTGGTTCTCCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: RTSPFLVTRPGF*APLISSGSPGG
Trigger: GCCTCCTGGAGAACCACTGGAAATTAAAGGTGCCAAGAAGCCTGGTCTCGTTACCAAAAATGGACTTGTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552270.1
3UTR CAA 72 bp CTTCAGCTGTCAGTTCTACCACTGACGTCTCACCCGTaGAAAAGTACTGAGAGGCAGGGATCATTTTTCCAT +
Preference number: 4 (lower is better)
Translates to: LQLSVLPLTSHP*KSTERQGSFFH
Trigger: ATGGAAAAATGATCCCTGCCTCTCAGTACTTTTCAACGGGTGAGACGTCAGTGGTAGAACTGACAGCTGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552270.1
3UTR CAA 72 bp TGTTTGCCAATAGGAGTGGATCCAGTGAAACCAAGTTaGCGGATGTCAGGATGTTCAGACAGACGTTGTCCT +
Preference number: 4 (lower is better)
Translates to: CLPIGVDPVKPS*RMSGCSDRRCP
Trigger: AGGACAACGTCTGTCTGAACATCCTGACATCCGCAAACTTGGTTTCACTGGATCCACTCCTATTGGCAAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR TCA 90 bp TGGCTTGCATTTGTTCTGATGGCATGCATCTCTTCCCAAACTCTGTATTCAGTGGGTATAGACAGCCCCTaGATCAAGGGCTTCAATAGT +
Preference number: 4 (lower is better)
Translates to: WLAFVLMACISSQTLYSVGIDSP*IKGFNS
Trigger: ACTATTGAAGCCCTTGATTCAGGGGCTGTCTATACC...CACTGAATACAGAGTTTGGGAAGAGATGCATGCCATCAGAACAAATGCAAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR TCA 90 bp AGACCAGTTGGGAGACTTGAGCAAAATTGTAGGAAAGAGGTAACAGGCCAGGTGAGTTCTCTCCTTTGTTaGAAAATACTGCTCCCATGC +
Preference number: 4 (lower is better)
Translates to: RPVGRLEQNCRKEVTGQVSSLLC*KILLPC
Trigger: GCATGGGAGCAGTATTTTTCAACAAAGGAGAGAACT...CACCTGGCCTGTTACCTCTTTCCTACAATTTTGCTCAAGTCTCCCAACTGGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR TCA 90 bp GATCTGTTTGCCAATAGGAGTGGATCCAGTGAAACCAAGTTTGCGGATGTCAGGAGTTCTCTCCTTTGTTaGAAAATACTGCTCCCATGC +
Preference number: 4 (lower is better)
Translates to: DLFANRSGSSETKFADVRSSLLC*KILLPC
Trigger: GCATGGGAGCAGTATTTTTCAACAAAGGAGAGAACT...CCTGACATCCGCAAACTTGGTTTCACTGGATCCACTCCTATTGGCAAACAGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR TCA 90 bp ACTTGCAGAATTGTGTGTGTGCACATGAATTTTGGGGGTAGAAGCGGGACACAGAGTTCTCTCCTTTGTTaGAAAATACTGCTCCCATGC +
Preference number: 4 (lower is better)
Translates to: TCRIVCVHMNFGGRSGTQSSLLC*KILLPC
Trigger: GCATGGGAGCAGTATTTTTCAACAAAGGAGAGAACT...CTGTGTCCCGCTTCTACCCCCAAAATTCATGTGCACACACACAATTCTGCAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR TCA 90 bp ATTCTGCCAAGTCTCCAAAATGACAAATATTCCCTAAGGCTTCTTCAAAGCCAAACACGGTCGGCTCCATaGAAAAGCCTGGCCTTTGGA +
Preference number: 4 (lower is better)
Translates to: ILPSLQNDKYSLRLLQSQTRSAP*KSLAFG
Trigger: TCCAAAGGCCAGGCTTTTTCATGGAGCCGACCGTGT...TTGGCTTTGAAGAAGCCTTAGGGAATATTTGTCATTTTGGAGACTTGGCAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR TCA 90 bp AGACCAGTTGGGAGACTTGAGCAAAATTGTAGGAAAGAGGTAACAGGCCAGGTGATAACTGCATGGTACTaGCATCTTCAAGATGGGAAC +
Preference number: 4 (lower is better)
Translates to: RPVGRLEQNCRKEVTGQVITAWY*HLQDGN
Trigger: GTTCCCATCTTGAAGATGTCAGTACCATGCAGTTAT...CACCTGGCCTGTTACCTCTTTCCTACAATTTTGCTCAAGTCTCCCAACTGGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR TCA 90 bp AGACCAGTTGGGAGACTTGAGCAAAATTGTAGGAAAGAGGTAACAGGCCAGGTGATAATGTTTCTAGGTTaGTCACCCATCACAGTGGGT +
Preference number: 4 (lower is better)
Translates to: RPVGRLEQNCRKEVTGQVIMFLG*SPITVG
Trigger: ACCCACTGTGATGGGTGATCAACCTAGAAACATTAT...CACCTGGCCTGTTACCTCTTTCCTACAATTTTGCTCAAGTCTCCCAACTGGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR TCA 90 bp CCTCCTGCCTCAACACACCCAATCTTCTTAAGTGTGTCCAGAGTTGTAAAGGGCCTAGGAATTGATGATTaGAAAGGGTTGTGGGAAATG +
Preference number: 4 (lower is better)
Translates to: PPASTHPIFLSVSRVVKGLGIDD*KGLWEM
Trigger: CATTTCCCACAACCCTTTTCAATCATCAATTCCTAG...GCCCTTTACAACTCTGGACACACTTAAGAAGATTGGGTGTGTTGAGGCAGGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR TCA 90 bp TTTAAACAGACGAGTGAAGTGACACTGTCTGACTTAAGCTTTGAACAGGACCGCAGATCACACAGCCAGTaGACAGCAGAACCAATAGGT +
Preference number: 4 (lower is better)
Translates to: FKQTSEVTLSDLSFEQDRRSHSQ*TAEPIG
Trigger: ACCTATTGGTTCTGCTGTTCACTGGCTGTGTGATCT...GCGGTCCTGTTCAAAGCTTAAGTCAGACAGTGTCACTTCACTCGTCTGTTTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR TCA 90 bp CCTCCTGCCTCAACACACCCAATCTTCTTAAGTGTGTCCAGAGTTGTAAAGGGCGTCACACATAGATGGTaGAAATTTACTCACCTGACT +
Preference number: 4 (lower is better)
Translates to: PPASTHPIFLSVSRVVKGVTHRW*KFTHLT
Trigger: AGTCAGGTGAGTAAATTTTCACCATCTATGTGTGAC...GCCCTTTACAACTCTGGACACACTTAAGAAGATTGGGTGTGTTGAGGCAGGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR TCA 90 bp ACTTGCAGAATTGTGTGTGTGCACATGAATTTTGGGGGTAGAAGCGGGACACAGGCCAAGTCTCCAAAATaGCAAATATTCCCTAAGGCT +
Preference number: 4 (lower is better)
Translates to: TCRIVCVHMNFGGRSGTQAKSPK*QIFPKA
Trigger: AGCCTTAGGGAATATTTGTCATTTTGGAGACTTGGC...CTGTGTCCCGCTTCTACCCCCAAAATTCATGTGCACACACACAATTCTGCAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR TCA 90 bp CCTCCTGCCTCAACACACCCAATCTTCTTAAGTGTGTCCAGAGTTGTAAAGGGCAAACTCTGTATTCAGTaGAGGCAAATTAGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: PPASTHPIFLSVSRVVKGKLCIQ*RQISGS
Trigger: TGAGCCACTAATTTGCCTTCACTGAATACAGAGTTT...GCCCTTTACAACTCTGGACACACTTAAGAAGATTGGGTGTGTTGAGGCAGGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR TCA 90 bp TGCTTAAAGTGTCCACACCTCCCGATTCAGGTGATAATAAGATCACAGCTTCATGGCTTGCATTTGTTCTaGTGGCATGCATCTCTTCCC +
Preference number: 4 (lower is better)
Translates to: CLKCPHLPIQVIIRSQLHGLHLF*WHASLP
Trigger: GGGAAGAGATGCATGCCATCAGAACAAATGCAAGCC...ATGAAGCTGTGATCTTATTATCACCTGAATCGGGAGGTGTGGACACTTTAAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR TCA 90 bp AAAAATACTGCTCCCATGCCCATTCGCACAGCCTTGTCAAGTTCACAGTCATTACTTTTCCATCAGCTATaGGTTGGACAGCTTCATGGC +
Preference number: 4 (lower is better)
Translates to: KNTAPMPIRTALSSSQSLLFHQL*VGQLHG
Trigger: GCCATGAAGCTGTCCAACTCATAGCTGATGGAAAAG...TAATGACTGTGAACTTGACAAGGCTGTGCGAATGGGCATGGGAGCAGTATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR GCA 90 bp ACTTGTCTTCCCCCGTACACCAAAGTGGCCCCTTCTTTCACTCCAGTTTCACAGAAACCGATTATAAAGTaGATCCACTGTATCATTGGG +
Preference number: 4 (lower is better)
Translates to: TCLPPYTKVAPSFTPVSQKPIIK*IHCIIG
Trigger: CCCAATGATACAGTGGATGCACTTTATAATCGGTTT...CTGTGAAACTGGAGTGAAAGAAGGGGCCACTTTGGTGTACGGGGGAAGACAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR GCA 90 bp TGGAATTTAGAAATGACCATAATAGGCCCAAAGGATTCCTCTTTGGCGAGGTACCCCCTTTGGAAAGCCTaGTTTCACAGACAGTTCTGC +
Preference number: 4 (lower is better)
Translates to: WNLEMTIIGPKDSSLARYPLWKA*FHRQFC
Trigger: GCAGAACTGTCTGTGAAAGCAGGCTTTCCAAAGGGG...GTACCTCGCCAAAGAGGAATCCTTTGGGCCTATTATGGTCATTTCTAAATTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR GCA 90 bp ACTTGCAGAATTGTGTGTGTGCACATGAATTTTGGGGGTAGAAGCGGGACACAGTTTGTTGAAAAATACTaGTCCCATGCCCATTCGCAC +
Preference number: 4 (lower is better)
Translates to: TCRIVCVHMNFGGRSGTQFVEKY*SHAHSH
Trigger: GTGCGAATGGGCATGGGAGCAGTATTTTTCAACAAA...CTGTGTCCCGCTTCTACCCCCAAAATTCATGTGCACACACACAATTCTGCAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR GCA 90 bp TTTAAACAGACGAGTGAAGTGACACTGTCTGACTTAAGCTTTGAACAGGACCGCGTACTATTTGCTCGCTaGAACACTCCATCGATGTCC +
Preference number: 4 (lower is better)
Translates to: FKQTSEVTLSDLSFEQDRVLFAR*NTPSMS
Trigger: GGACATCGATGGAGTGTTGCAGCGAGCAAATAGTAC...GCGGTCCTGTTCAAAGCTTAAGTCAGACAGTGTCACTTCACTCGTCTGTTTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR GCA 90 bp TTTAAACAGACGAGTGAAGTGACACTGTCTGACTTAAGCTTTGAACAGGACCGCAGGCACATGTGTAAATaGTTTAACATGGCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: FKQTSEVTLSDLSFEQDRRHMCK*FNMAWP
Trigger: GGGCCAGGCCATGTTAAAGCATTTACACATGTGCCT...GCGGTCCTGTTCAAAGCTTAAGTCAGACAGTGTCACTTCACTCGTCTGTTTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR GCA 90 bp TTTAAACAGACGAGTGAAGTGACACTGTCTGACTTAAGCTTTGAACAGGACCGCGAGGCTCAGAGGAGTTaGGAGAGTTTCCCAAAGTTA +
Preference number: 4 (lower is better)
Translates to: FKQTSEVTLSDLSFEQDREAQRS*ESFPKL
Trigger: TAACTTTGGGAAACTCTCGCAACTCCTCTGAGCCTC...GCGGTCCTGTTCAAAGCTTAAGTCAGACAGTGTCACTTCACTCGTCTGTTTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR GCA 90 bp ATTCTGCCAAGTCTCCAAAATGACAAATATTCCCTAAGGCTTCTTCAAAGCCAAGAAGGACGAGCGAGCTaGCCAAAGAAAAGCACCCCT +
Preference number: 4 (lower is better)
Translates to: ILPSLQNDKYSLRLLQSQEGRAS*PKKSTP
Trigger: AGGGGTGCTTTTCTTTGGGCAGCTCGCTCGTCCTTC...TTGGCTTTGAAGAAGCCTTAGGGAATATTTGTCATTTTGGAGACTTGGCAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR GCA 90 bp TTTAAACAGACGAGTGAAGTGACACTGTCTGACTTAAGCTTTGAACAGGACCGCCTGACTACTTCTGTCTaGCAATGGGAAATGGGCTGT +
Preference number: 4 (lower is better)
Translates to: FKQTSEVTLSDLSFEQDRLTTSV*QWEMGC
Trigger: ACAGCCCATTTCCCATTGGCAGACAGAAGTAGTCAG...GCGGTCCTGTTCAAAGCTTAAGTCAGACAGTGTCACTTCACTCGTCTGTTTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR GCA 90 bp ACTTGCAGAATTGTGTGTGTGCACATGAATTTTGGGGGTAGAAGCGGGACACAGCCCCTCATGTTATTCTaGCAAGTCTCCAAAATGACA +
Preference number: 4 (lower is better)
Translates to: TCRIVCVHMNFGGRSGTQPLMLF*QVSKMT
Trigger: TGTCATTTTGGAGACTTGGCAGAATAACATGAGGGG...CTGTGTCCCGCTTCTACCCCCAAAATTCATGTGCACACACACAATTCTGCAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CCA 90 bp TGCTTAAAGTGTCCACACCTCCCGATTCAGGTGATAATAAGATCACAGCTTCATCCTGGGCAGGATGGATaGGTGATAAATGATAGAGCC +
Preference number: 4 (lower is better)
Translates to: CLKCPHLPIQVIIRSQLHPGQDG*VINDRA
Trigger: GGCTCTATCATTTATCACCCATCCATCCTGCCCAGG...ATGAAGCTGTGATCTTATTATCACCTGAATCGGGAGGTGTGGACACTTTAAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CCA 90 bp TTTAAACAGACGAGTGAAGTGACACTGTCTGACTTAAGCTTTGAACAGGACCGCGTTGATGACCCCCTTTaGAAAGCCTGCTTTCACAGA +
Preference number: 4 (lower is better)
Translates to: FKQTSEVTLSDLSFEQDRVDDPL*KACFHR
Trigger: TCTGTGAAAGCAGGCTTTCCAAAGGGGGTCATCAAC...GCGGTCCTGTTCAAAGCTTAAGTCAGACAGTGTCACTTCACTCGTCTGTTTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CCA 90 bp GATCTGTTTGCCAATAGGAGTGGATCCAGTGAAACCAAGTTTGCGGATGTCAGGCAAAGGATTCCTCTTTaGCGAGGTACATGTAGTCTT +
Preference number: 4 (lower is better)
Translates to: DLFANRSGSSETKFADVRQRIPL*RGTCSL
Trigger: AAGACTACATGTACCTCGCCAAAGAGGAATCCTTTG...CCTGACATCCGCAAACTTGGTTTCACTGGATCCACTCCTATTGGCAAACAGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR CCA 90 bp CCTCCTGCCTCAACACACCCAATCTTCTTAAGTGTGTCCAGAGTTGTAAAGGGCCTCTGTTTATCATGCTaGGATCAAACCTCCTATTCT +
Preference number: 4 (lower is better)
Translates to: PPASTHPIFLSVSRVVKGLCLSC*DQTSYS
Trigger: AGAATAGGAGGTTTGATCCCAGCATGATAAACAGAG...GCCCTTTACAACTCTGGACACACTTAAGAAGATTGGGTGTGTTGAGGCAGGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CCA 90 bp ACTTGCAGAATTGTGTGTGTGCACATGAATTTTGGGGGTAGAAGCGGGACACAGTTGGTCTACGTGAAATaGGGGCCATTGAAAGGTTTT +
Preference number: 4 (lower is better)
Translates to: TCRIVCVHMNFGGRSGTQLVYVK*GPLKGF
Trigger: AAAACCTTTCAATGGCCCCCATTTCACGTAGACCAA...CTGTGTCCCGCTTCTACCCCCAAAATTCATGTGCACACACACAATTCTGCAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CCA 90 bp TGGCTTGCATTTGTTCTGATGGCATGCATCTCTTCCCAAACTCTGTATTCAGTGAGGCAGTCAGGATGGTaGAACAGAATGAGAGGGAAA +
Preference number: 4 (lower is better)
Translates to: WLAFVLMACISSQTLYSVRQSGW*NRMRGK
Trigger: TTTCCCTCTCATTCTGTTCCACCATCCTGACTGCCT...CACTGAATACAGAGTTTGGGAAGAGATGCATGCCATCAGAACAAATGCAAGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CCA 90 bp TGCTTAAAGTGTCCACACCTCCCGATTCAGGTGATAATAAGATCACAGCTTCATGTGGTGTGCTGGTGCTaGCTTGCATTTGTTCTGATG +
Preference number: 4 (lower is better)
Translates to: CLKCPHLPIQVIIRSQLHVVCWC*LAFVLM
Trigger: CATCAGAACAAATGCAAGCCAGCACCAGCACACCAC...ATGAAGCTGTGATCTTATTATCACCTGAATCGGGAGGTGTGGACACTTTAAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CCA 90 bp TGGCTTGCATTTGTTCTGATGGCATGCATCTCTTCCCAAACTCTGTATTCAGTGAAGAATGACAGCAGATaGGGTATGAATGTGGGGGCA +
Preference number: 4 (lower is better)
Translates to: WLAFVLMACISSQTLYSVKNDSR*GMNVGA
Trigger: TGCCCCCACATTCATACCCCATCTGCTGTCATTCTT...CACTGAATACAGAGTTTGGGAAGAGATGCATGCCATCAGAACAAATGCAAGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CCA 90 bp TGGCTTGCATTTGTTCTGATGGCATGCATCTCTTCCCAAACTCTGTATTCAGTGCTTGGAGGGCAGGTATaGGGAACCAAATTTGTTTCC +
Preference number: 4 (lower is better)
Translates to: WLAFVLMACISSQTLYSVLGGQV*GTKFVS
Trigger: GGAAACAAATTTGGTTCCCCATACCTGCCCTCCAAG...CACTGAATACAGAGTTTGGGAAGAGATGCATGCCATCAGAACAAATGCAAGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CCA 90 bp ATTCTGCCAAGTCTCCAAAATGACAAATATTCCCTAAGGCTTCTTCAAAGCCAAGTTGGAAGAAGCGCCTaGTCAGCGTTATCCTCGAGG +
Preference number: 4 (lower is better)
Translates to: ILPSLQNDKYSLRLLQSQVGRSA*SALSSR
Trigger: CCTCGAGGATAACGCTGACCAGGCGCTTCTTCCAAC...TTGGCTTTGAAGAAGCCTTAGGGAATATTTGTCATTTTGGAGACTTGGCAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652515.1
3UTR CAA 72 bp GACTTGCCACCAAGCTCAAGGGAAACTTTCTTCAAGTaGCTAACAGCACAGCTCTTCATGATCTGTTTGCCA +
Preference number: 4 (lower is better)
Translates to: DLPPSSRETFFK*LTAQLFMICLP
Trigger: TGGCAAACAGATCATGAAGAGCTGTGCTGTTAGCAACTTGAAGAAAGTTTCCCTTGAGCTTGGTGGCAAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552270.1
3UTR CAA 72 bp GTATTGCAGCAGCTTTTCCAGATGAGCCTTATGATTTaGGGGCCCATGATCAGTGGATCACTCTTGTCACAA +
Preference number: 4 (lower is better)
Translates to: VLQQLFQMSLMI*GPMISGSLLSQ
Trigger: TTGTGACAAGAGTGATCCACTGATCATGGGCCCCAAAATCATAAGGCTCATCTGGAAAAGCTGCTGCAATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR TCA 90 bp TGGCTTGCATTTGTTCTGATGGCATGCATCTCTTCCCAAACTCTGTATTCAGTGCTTTTCCATCAGCTATaGGTTGGACAGCTTCTACCA +
Preference number: 4 (lower is better)
Translates to: WLAFVLMACISSQTLYSVLFHQL*VGQLLP
Trigger: TGGTAGAAGCTGTCCAACTCATAGCTGATGGAAAAG...CACTGAATACAGAGTTTGGGAAGAGATGCATGCCATCAGAACAAATGCAAGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR TCA 90 bp TGGCTTGCATTTGTTCTGATGGCATGCATCTCTTCCCAAACTCTGTATTCAGTGCCAGGGACTTTATCATaGCCTCGAATCCAGTTATGT +
Preference number: 4 (lower is better)
Translates to: WLAFVLMACISSQTLYSVPGTLS*PRIQLC
Trigger: ACATAACTGGATTCGAGGTCATGATAAAGTCCCTGG...CACTGAATACAGAGTTTGGGAAGAGATGCATGCCATCAGAACAAATGCAAGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR TCA 90 bp TGTTTGCCAATAGGAGTGGATCCAGTGAAACCAAGTTTGCGGATGTCAGGATGTTCGAGCCATAGAAAGTaGCCATCTGTCCATTTATCT +
Preference number: 4 (lower is better)
Translates to: CLPIGVDPVKPSLRMSGCSSHRK*PSVHLS
Trigger: AGATAAATGGACAGATGGTCACTTTCTATGGCTCGA...ACATCCTGACATCCGCAAACTTGGTTTCACTGGATCCACTCCTATTGGCAAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR TCA 90 bp CCTCCTGCCTCAACACACCCAATCTTCTTAAGTGTGTCCAGAGTTGTAAAGGGCTTTAAAGAAGTCTGTTaGGTCTTCAATAATGGGGAC +
Preference number: 4 (lower is better)
Translates to: PPASTHPIFLSVSRVVKGFKEVC*VFNNGD
Trigger: GTCCCCATTATTGAAGACTCAACAGACTTCTTTAAA...GCCCTTTACAACTCTGGACACACTTAAGAAGATTGGGTGTGTTGAGGCAGGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR TCA 90 bp TGCTTAAAGTGTCCACACCTCCCGATTCAGGTGATAATAAGATCACAGCTTCATGTGGCTCTTTCTTGGTaGAGGTCAGATTGCGATTTG +
Preference number: 4 (lower is better)
Translates to: CLKCPHLPIQVIIRSQLHVALSW*RSDCDL
Trigger: CAAATCGCAATCTGACCTTCACCAAGAAAGAGCCAC...ATGAAGCTGTGATCTTATTATCACCTGAATCGGGAGGTGTGGACACTTTAAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR TCA 90 bp TCAATAATGGGGACATTGCTTAAAATTCCAGCCCAGATGACCTTGATGGTCTCTGTGGCTCTTTCTTGGTaGAGGTCAGATTGCGATTTG +
Preference number: 4 (lower is better)
Translates to: SIMGTLLKIPAQMTLMVSVALSW*RSDCDL
Trigger: CAAATCGCAATCTGACCTTCACCAAGAAAGAGCCAC...AGAGACCATCAAGGTCATCTGGGCTGGAATTTTAAGCAATGTCCCCATTATTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR TCA 90 bp TGCTTAAAGTGTCCACACCTCCCGATTCAGGTGATAATAAGATCACAGCTTCATTTGTGTGTGTGCACATaGATTTTGGGGGTAGAAGCG +
Preference number: 4 (lower is better)
Translates to: CLKCPHLPIQVIIRSQLHLCVCT*ILGVEA
Trigger: CGCTTCTACCCCCAAAATTCATGTGCACACACACAA...ATGAAGCTGTGATCTTATTATCACCTGAATCGGGAGGTGTGGACACTTTAAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR TCA 90 bp TGGCTTGCATTTGTTCTGATGGCATGCATCTCTTCCCAAACTCTGTATTCAGTGGTGTCTCTCATCAGATaGTATTTGAGGAGAGACCTG +
Preference number: 4 (lower is better)
Translates to: WLAFVLMACISSQTLYSVVSLIR*YLRRDL
Trigger: CAGGTCTCTCCTCAAATATCATCTGATGAGAGACAC...CACTGAATACAGAGTTTGGGAAGAGATGCATGCCATCAGAACAAATGCAAGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR TCA 90 bp AGACCAGTTGGGAGACTTGAGCAAAATTGTAGGAAAGAGGTAACAGGCCAGGTGAATAGCTGTGTGATTTaGGCAGGTTACTTAACCTCT +
Preference number: 4 (lower is better)
Translates to: RPVGRLEQNCRKEVTGQVNSCVI*AGYLTS
Trigger: AGAGGTTAAGTAACCTGCTCAAATCACACAGCTATT...CACCTGGCCTGTTACCTCTTTCCTACAATTTTGCTCAAGTCTCCCAACTGGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR TCA 90 bp AGACCAGTTGGGAGACTTGAGCAAAATTGTAGGAAAGAGGTAACAGGCCAGGTGTTAGCAGCTCTTCAGTaGTTCGTAGTATGGATGTAT +
Preference number: 4 (lower is better)
Translates to: RPVGRLEQNCRKEVTGQVLAALQ*FVVWMY
Trigger: ATACATCCATACTACGAATCACTGAAGAGCTGCTAA...CACCTGGCCTGTTACCTCTTTCCTACAATTTTGCTCAAGTCTCCCAACTGGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652515.1
CDS-3UTR GCA 90 bp CCTCCTGCCTCAACACACCCAATCTTCTTAAGTGTGTCCAGAGTTGTAAAGGGCTTTCACAGACAGTTCTaGAAACTTCAAAGCAGTCAA +
Preference number: 4 (lower is better)
Translates to: PPASTHPIFLSVSRVVKGFHRQF*KLQSSQ
Trigger: TTGACTGCTTTGAAGTTTGCAGAACTGTCTGTGAAA...GCCCTTTACAACTCTGGACACACTTAAGAAGATTGGGTGTGTTGAGGCAGGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR GCA 90 bp CTGACGTCTCACCCGTTGAAAAGTACTGAGAGGCAGGGATCATTTTTCCATCTTTTTGTTGAAAAATACTaGTCCCATGCCCATTCGCAC +
Preference number: 4 (lower is better)
Translates to: LTSHPLKSTERQGSFFHLFVEKY*SHAHSH
Trigger: GTGCGAATGGGCATGGGAGCAGTATTTTTCAACAAA...AAGATGGAAAAATGATCCCTGCCTCTCAGTACTTTTCAACGGGTGAGACGTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR GCA 90 bp ATTCTGCCAAGTCTCCAAAATGACAAATATTCCCTAAGGCTTCTTCAAAGCCAAGTGGCTGACACCTCCTaGCTCAACACACCCAATCTT +
Preference number: 4 (lower is better)
Translates to: ILPSLQNDKYSLRLLQSQVADTS*LNTPNL
Trigger: AAGATTGGGTGTGTTGAGGCAGGAGGTGTCAGCCAC...TTGGCTTTGAAGAAGCCTTAGGGAATATTTGTCATTTTGGAGACTTGGCAGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR GCA 90 bp TGGCTTGCATTTGTTCTGATGGCATGCATCTCTTCCCAAACTCTGTATTCAGTGGGCATTTTTCAGTGCTaGTGTATCAGGCATTGTGTC +
Preference number: 4 (lower is better)
Translates to: WLAFVLMACISSQTLYSVGIFQC*CIRHCV
Trigger: GACACAATGCCTGATACAGCAGCACTGAAAAATGCC...CACTGAATACAGAGTTTGGGAAGAGATGCATGCCATCAGAACAAATGCAAGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR GCA 90 bp AGACCAGTTGGGAGACTTGAGCAAAATTGTAGGAAAGAGGTAACAGGCCAGGTGTGTGATTCAGAAATTTaGCGCCTTCTAGTCACACAT +
Preference number: 4 (lower is better)
Translates to: RPVGRLEQNCRKEVTGQVCDSEI*RLLVTH
Trigger: ATGTGTGACTAGAAGGCGGCAAATTTCTGAATCACA...CACCTGGCCTGTTACCTCTTTCCTACAATTTTGCTCAAGTCTCCCAACTGGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR GCA 90 bp TGGCTTGCATTTGTTCTGATGGCATGCATCTCTTCCCAAACTCTGTATTCAGTGGAAGGAAAGTGGAACTaGTTAAAGTGTCCACACCTC +
Preference number: 4 (lower is better)
Translates to: WLAFVLMACISSQTLYSVEGKWN*LKCPHL
Trigger: GAGGTGTGGACACTTTAAGCAGTTCCACTTTCCTTC...CACTGAATACAGAGTTTGGGAAGAGATGCATGCCATCAGAACAAATGCAAGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR GCA 90 bp TTTAAACAGACGAGTGAAGTGACACTGTCTGACTTAAGCTTTGAACAGGACCGCTATCCTCGAGGATCATaGCTTCCTGTTAATTCCCCA +
Preference number: 4 (lower is better)
Translates to: FKQTSEVTLSDLSFEQDRYPRGS*LPVNSP
Trigger: TGGGGAATTAACAGGAAGGCATGATCCTCGAGGATA...GCGGTCCTGTTCAAAGCTTAAGTCAGACAGTGTCACTTCACTCGTCTGTTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652515.1
CDS-3UTR CCA 90 bp TGCTACTGCTTTATCAACATCCGCCAAAGAAGCGTAGGATACTTTGCATATTGTCCTGGGCAGGATGGATaGGTGATAAATGATAGAGCC +
Preference number: 4 (lower is better)
Translates to: CYCFINIRQRSVGYFAYCPGQDG*VINDRA
Trigger: GGCTCTATCATTTATCACCCATCCATCCTGCCCAGG...ACAATATGCAAAGTATCCTACGCTTCTTTGGCGGATGTTGATAAAGCAGTAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR CCA 90 bp CCTCCTGCCTCAACACACCCAATCTTCTTAAGTGTGTCCAGAGTTGTAAAGGGCGCATTTTCCTTTTTCTaGATACCTTCATATGTTGCC +
Preference number: 4 (lower is better)
Translates to: PPASTHPIFLSVSRVVKGAFSFF*IPSYVA
Trigger: GGCAACATATGAAGGTATCCAGAAAAAGGAAAATGC...GCCCTTTACAACTCTGGACACACTTAAGAAGATTGGGTGTGTTGAGGCAGGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CCA 90 bp TTTAAACAGACGAGTGAAGTGACACTGTCTGACTTAAGCTTTGAACAGGACCGCACCTTTAATTTCCAGTaGTTCTCCAGGAGGCACAGA +
Preference number: 4 (lower is better)
Translates to: FKQTSEVTLSDLSFEQDRTFNFQ*FSRRHR
Trigger: TCTGTGCCTCCTGGAGAACCACTGGAAATTAAAGGT...GCGGTCCTGTTCAAAGCTTAAGTCAGACAGTGTCACTTCACTCGTCTGTTTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CCA 90 bp AGACCAGTTGGGAGACTTGAGCAAAATTGTAGGAAAGAGGTAACAGGCCAGGTGAGCCTTCAAACTTGGTaGCCATATAGACATCTTCAT +
Preference number: 4 (lower is better)
Translates to: RPVGRLEQNCRKEVTGQVSLQTW*PYRHLH
Trigger: ATGAAGATGTCTATATGGCCACCAAGTTTGAAGGCT...CACCTGGCCTGTTACCTCTTTCCTACAATTTTGCTCAAGTCTCCCAACTGGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CCA 90 bp CCACCACATTTCTGTCTGATCTCTTCAACCAGCCTGGCAACATCCATTGAGCTTTGTAGATCCATCTGTTaGGTTGATAGTGTCGTAAGT +
Preference number: 4 (lower is better)
Translates to: PPHFCLISSTSLATSIELCRSIC*VDSVVS
Trigger: ACTTACGACACTATCAACCCAACAGATGGATCTACA...AAGCTCAATGGATGTTGCCAGGCTGGTTGAAGAGATCAGACAGAAATGTGGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR CCA 90 bp TTTAAACAGACGAGTGAAGTGACACTGTCTGACTTAAGCTTTGAACAGGACCGCCGATTTGGACGGGCCTaGTTGATTGGAATAGTAGAA +
Preference number: 4 (lower is better)
Translates to: FKQTSEVTLSDLSFEQDRRFGRA*LIGIVE
Trigger: TTCTACTATTCCAATCAACCAGGCCCGTCCAAATCG...GCGGTCCTGTTCAAAGCTTAAGTCAGACAGTGTCACTTCACTCGTCTGTTTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CCA 90 bp TGGCTTGCATTTGTTCTGATGGCATGCATCTCTTCCCAAACTCTGTATTCAGTGCAAATTCGTCGTGGATaGATTCTTCCACGAACAACC +
Preference number: 4 (lower is better)
Translates to: WLAFVLMACISSQTLYSVQIRRG*ILPRTT
Trigger: GGTTGTTCGTGGAAGAATCCATCCACGACGAATTTG...CACTGAATACAGAGTTTGGGAAGAGATGCATGCCATCAGAACAAATGCAAGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CCA 90 bp ATTCTGCCAAGTCTCCAAAATGACAAATATTCCCTAAGGCTTCTTCAAAGCCAAGGGGCCCATGATCAGTaGATCTGTCAAGTGGATCAC +
Preference number: 4 (lower is better)
Translates to: ILPSLQNDKYSLRLLQSQGAHDQ*ICQVDH
Trigger: GTGATCCACTTGACAGATCCACTGATCATGGGCCCC...TTGGCTTTGAAGAAGCCTTAGGGAATATTTGTCATTTTGGAGACTTGGCAGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CCA 90 bp TGCTTAAAGTGTCCACACCTCCCGATTCAGGTGATAATAAGATCACAGCTTCATCTCCATGAAAAAGCCTaGCCTTTGGACTTGTCTTCC +
Preference number: 4 (lower is better)
Translates to: CLKCPHLPIQVIIRSQLHLHEKA*PLDLSS
Trigger: GGAAGACAAGTCCAAAGGCCAGGCTTTTTCATGGAG...ATGAAGCTGTGATCTTATTATCACCTGAATCGGGAGGTGTGGACACTTTAAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CCA 90 bp TTTAAACAGACGAGTGAAGTGACACTGTCTGACTTAAGCTTTGAACAGGACCGCGTAAATGCTTTAACATaGCCTGGCCCTCTTCATGGT +
Preference number: 4 (lower is better)
Translates to: FKQTSEVTLSDLSFEQDRVNALT*PGPLHG
Trigger: ACCATGAAGAGGGCCAGGCCATGTTAAAGCATTTAC...GCGGTCCTGTTCAAAGCTTAAGTCAGACAGTGTCACTTCACTCGTCTGTTTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CCA 90 bp AGACCAGTTGGGAGACTTGAGCAAAATTGTAGGAAAGAGGTAACAGGCCAGGTGTCTGCCAATGGGAAATaGGCTGTTAATAGTTTCCAT +
Preference number: 4 (lower is better)
Translates to: RPVGRLEQNCRKEVTGQVSANGK*AVNSFH
Trigger: ATGGAAACTATTAACAGCCCATTTCCCATTGGCAGA...CACCTGGCCTGTTACCTCTTTCCTACAATTTTGCTCAAGTCTCCCAACTGGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CCA 90 bp CCTCCTGCCTCAACACACCCAATCTTCTTAAGTGTGTCCAGAGTTGTAAAGGGCGAATTAGAAGGAAAGTaGAACTGCTTAAAGTGTCCA +
Preference number: 4 (lower is better)
Translates to: PPASTHPIFLSVSRVVKGELEGK*NCLKCP
Trigger: TGGACACTTTAAGCAGTTCCACTTTCCTTCTAATTC...GCCCTTTACAACTCTGGACACACTTAAGAAGATTGGGTGTGTTGAGGCAGGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CCA 90 bp TGCTTAAAGTGTCCACACCTCCCGATTCAGGTGATAATAAGATCACAGCTTCATGCAAAGGCATGGGGATaGGGAATTAGAAGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: CLKCPHLPIQVIIRSQLHAKAWG*GIRRKV
Trigger: CACTTTCCTTCTAATTCCCCATCCCCATGCCTTTGC...ATGAAGCTGTGATCTTATTATCACCTGAATCGGGAGGTGTGGACACTTTAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR CAA 72 bp CTCTTGATCTTCTCCTCTCAGTTTCCTCACGACCTTTaGGATAAAGCCTTCAAACTTGGTGGCCATATAGAC +
Preference number: 4 (lower is better)
Translates to: LLIFSSQFPHDL*DKAFKLGGHID
Trigger: GTCTATATGGCCACCAAGTTTGAAGGCTTTATCCAAAAGGTCGTGAGGAAACTGAGAGGAGAAGATCAAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552270.1
3UTR CAA 72 bp TGTTTAACTCCGCCAAATGGGGCCGCCACATCTGTCTaGTTGTATGTGTTAATAAAAACAGTTCCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: CLTPPNGAATSV*LYVLIKTVPAS
Trigger: GGAAGCAGGAACTGTTTTTATTAACACATACAACAAGACAGATGTGGCGGCCCCATTTGGCGGAGTTAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR TCA 90 bp ACATACATAGCTTTGTTTATGTCTCTTGTAAAAACCCCTGAGGCCAAACCATACTCCATGGGAATGAACTaGGTGCAGAAAGGGAGCACA +
Preference number: 4 (lower is better)
Translates to: TYIALFMSLVKTPEAKPYSMGMN*VQKGST
Trigger: TGTGCTCCCTTTCTGCACTCAGTTCATTCCCATGGA...GTATGGTTTGGCCTCAGGGGTTTTTACAAGAGACATAAACAAAGCTATGTATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR TCA 90 bp ATTCTGCCAAGTCTCCAAAATGACAAATATTCCCTAAGGCTTCTTCAAAGCCAATCCATGGGAATGAACTaGGTGCAGAAAGGGAGCACA +
Preference number: 4 (lower is better)
Translates to: ILPSLQNDKYSLRLLQSQSMGMN*VQKGST
Trigger: TGTGCTCCCTTTCTGCACTCAGTTCATTCCCATGGA...TTGGCTTTGAAGAAGCCTTAGGGAATATTTGTCATTTTGGAGACTTGGCAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR TCA 90 bp TGGCTTGCATTTGTTCTGATGGCATGCATCTCTTCCCAAACTCTGTATTCAGTGCTTCTACCATGGCCTTaGTTCCTTCAGGAAAAAGAA +
Preference number: 4 (lower is better)
Translates to: WLAFVLMACISSQTLYSVLLPWP*FLQEKE
Trigger: TTCTTTTTCCTGAAGGAATCAAGGCCATGGTAGAAG...CACTGAATACAGAGTTTGGGAAGAGATGCATGCCATCAGAACAAATGCAAGCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR TCA 90 bp TGCTTAAAGTGTCCACACCTCCCGATTCAGGTGATAATAAGATCACAGCTTCATCTTTTCCATCAGCTATaGGTTGGACAGCTTCTACCA +
Preference number: 4 (lower is better)
Translates to: CLKCPHLPIQVIIRSQLHLFHQL*VGQLLP
Trigger: TGGTAGAAGCTGTCCAACTCATAGCTGATGGAAAAG...ATGAAGCTGTGATCTTATTATCACCTGAATCGGGAGGTGTGGACACTTTAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR TCA 90 bp ATTCTGCCAAGTCTCCAAAATGACAAATATTCCCTAAGGCTTCTTCAAAGCCAACACCACATTTCTGTCTaGTCTCTTCAACCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: ILPSLQNDKYSLRLLQSQHHISV*SLQPAW
Trigger: CCAGGCTGGTTGAAGAGATCAGACAGAAATGTGGTG...TTGGCTTTGAAGAAGCCTTAGGGAATATTTGTCATTTTGGAGACTTGGCAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR TCA 90 bp ACATACATAGCTTTGTTTATGTCTCTTGTAAAAACCCCTGAGGCCAAACCATACCACCACATTTCTGTCTaGTCTCTTCAACCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: TYIALFMSLVKTPEAKPYHHISV*SLQPAW
Trigger: CCAGGCTGGTTGAAGAGATCAGACAGAAATGTGGTG...GTATGGTTTGGCCTCAGGGGTTTTTACAAGAGACATAAACAAAGCTATGTATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR TCA 90 bp TCAATAATGGGGACATTGCTTAAAATTCCAGCCCAGATGACCTTGATGGTCTCTTCTTCATTCTGCAACTaGAGCCCACCACATTTCTGT +
Preference number: 4 (lower is better)
Translates to: SIMGTLLKIPAQMTLMVSSSFCN*SPPHFC
Trigger: ACAGAAATGTGGTGGGCTTCAGTTGCAGAATGAAGA...AGAGACCATCAAGGTCATCTGGGCTGGAATTTTAAGCAATGTCCCCATTATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR TCA 90 bp GTCCCCATTTTGGAATTTAGAAATGACCATAATAGGCCCAAAGGATTCCTCTTTTCCTGCTATGCCACCTaGGCCTGGAATGATGTTGAT +
Preference number: 4 (lower is better)
Translates to: VPILEFRNDHNRPKGFLFSCYAT*AWNDVD
Trigger: ATCAACATCATTCCAGGCTCAGGTGGCATAGCAGGA...AAAGAGGAATCCTTTGGGCCTATTATGGTCATTTCTAAATTCCAAAATGGGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR TCA 90 bp TCATTAATCTTATGCTGTGTATATAGCACAGTGGCAAAGGGGAAAAATGACTTAACACGGTCGGCTCCATaGAAAAGCCTGGCCTTTGGA +
Preference number: 4 (lower is better)
Translates to: SLILCCVYSTVAKGKNDLTRSAP*KSLAFG
Trigger: TCCAAAGGCCAGGCTTTTTCATGGAGCCGACCGTGT...TAAGTCATTTTTCCCCTTTGCCACTGTGCTATATACACAGCATAAGATTAATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000548418.1
CDS-3UTR TCA 90 bp ATTCTGCCAAGTCTCCAAAATGACAAATATTCCCTAAGGCTTCTTCAAAGCCAATTTTTGGTTTGTGGCTaGCACCTCCTGCCTCAACAC +
Preference number: 4 (lower is better)
Translates to: ILPSLQNDKYSLRLLQSQFLVCG*HLLPQH
Trigger: GTGTTGAGGCAGGAGGTGTCAGCCACAAACCAAAAA...TTGGCTTTGAAGAAGCCTTAGGGAATATTTGTCATTTTGGAGACTTGGCAGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR TCA 90 bp ACTTGCAGAATTGTGTGTGTGCACATGAATTTTGGGGGTAGAAGCGGGACACAGACTCAACCTAGGCTCTaGGATATTAGATTACTATCT +
Preference number: 4 (lower is better)
Translates to: TCRIVCVHMNFGGRSGTQTQPRL*DIRLLS
Trigger: AGATAGTAATCTAATATCTCAGAGCCTAGGTTGAGT...CTGTGTCCCGCTTCTACCCCCAAAATTCATGTGCACACACACAATTCTGCAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR TCA 90 bp TGTTGTTTAGTTTTTATTGATTCCCTACAATCCCCTCATGTTATTCTGCCAAGTACAGCAGATGGGGTATaGATGTGGGGGCATATGGCC +
Preference number: 4 (lower is better)
Translates to: CCLVFIDSLQSPHVILPSTADGV*MWGHMA
Trigger: GGCCATATGCCCCCACATTCATACCCCATCTGCTGT...ACTTGGCAGAATAACATGAGGGGATTGTAGGGAATCAATAAAAACTAAACAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR GCA 90 bp ACTTGCAGAATTGTGTGTGTGCACATGAATTTTGGGGGTAGAAGCGGGACACAGAAAAGCATCTTTTGCTaGTGCTACTGCTTTATCAAC +
Preference number: 4 (lower is better)
Translates to: TCRIVCVHMNFGGRSGTQKSIFC*CYCFIN
Trigger: GTTGATAAAGCAGTAGCAGCAGCAAAAGATGCTTTT...CTGTGTCCCGCTTCTACCCCCAAAATTCATGTGCACACACACAATTCTGCAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR GCA 90 bp ACTTGCAGAATTGTGTGTGTGCACATGAATTTTGGGGGTAGAAGCGGGACACAGTTCAAAAGCATCTTTTaGTGCTGCTACTGCTTTATC +
Preference number: 4 (lower is better)
Translates to: TCRIVCVHMNFGGRSGTQFKSIF*CCYCFI
Trigger: GATAAAGCAGTAGCAGCAGCAAAAGATGCTTTTGAA...CTGTGTCCCGCTTCTACCCCCAAAATTCATGTGCACACACACAATTCTGCAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR GCA 90 bp ATTCTGCCAAGTCTCCAAAATGACAAATATTCCCTAAGGCTTCTTCAAAGCCAAAGGGCGAAATTAGAGTaGCGAAGTGGCTTGAGAAGC +
Preference number: 4 (lower is better)
Translates to: ILPSLQNDKYSLRLLQSQRAKLE*RSGLRS
Trigger: GCTTCTCAAGCCACTTCGGCACTCTAATTTCGCCCT...TTGGCTTTGAAGAAGCCTTAGGGAATATTTGTCATTTTGGAGACTTGGCAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652515.1
CDS-3UTR CCA 90 bp ACTTGCAGAATTGTGTGTGTGCACATGAATTTTGGGGGTAGAAGCGGGACACAGGATAGAGCCGTGCTTTaGACTATCAATTATATCCAT +
Preference number: 4 (lower is better)
Translates to: TCRIVCVHMNFGGRSGTQDRAVL*TINYIH
Trigger: ATGGATATAATTGATAGTCCAAAGCACGGCTCTATC...CTGTGTCCCGCTTCTACCCCCAAAATTCATGTGCACACACACAATTCTGCAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CCA 90 bp TGTTGTTTAGTTTTTATTGATTCCCTACAATCCCCTCATGTTATTCTGCCAAGTTGTTGCCCCTTCTTCTaGCTGGGGTATACGAGGAGC +
Preference number: 4 (lower is better)
Translates to: CCLVFIDSLQSPHVILPSCCPFF*LGYTRS
Trigger: GCTCCTCGTATACCCCAGCCAGAAGAAGGGGCAACA...ACTTGGCAGAATAACATGAGGGGATTGTAGGGAATCAATAAAAACTAAACAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CCA 90 bp TGCTTAAAGTGTCCACACCTCCCGATTCAGGTGATAATAAGATCACAGCTTCATACGGGCCTGGTTGATTaGAATAGTAGAACCCTGAAT +
Preference number: 4 (lower is better)
Translates to: CLKCPHLPIQVIIRSQLHTGLVD*NSRTLN
Trigger: ATTCAGGGTTCTACTATTCCAATCAACCAGGCCCGT...ATGAAGCTGTGATCTTATTATCACCTGAATCGGGAGGTGTGGACACTTTAAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CCA 90 bp TGCTACTGCTTTATCAACATCCGCCAAAGAAGCGTAGGATACTTTGCATATTGTGTTGATGACCCCCTTTaGAAAGCCTGCTTTCACAGA +
Preference number: 4 (lower is better)
Translates to: CYCFINIRQRSVGYFAYCVDDPL*KACFHR
Trigger: TCTGTGAAAGCAGGCTTTCCAAAGGGGGTCATCAAC...ACAATATGCAAAGTATCCTACGCTTCTTTGGCGGATGTTGATAAAGCAGTAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR CCA 90 bp TCGTTACCAAAAAGAACAAGTCCATTTTTGGTAACGAGACCAGGCTTCTTGGCACAAATTCGTCGTGGATaGATTCTTCCACGAACAACC +
Preference number: 4 (lower is better)
Translates to: SLPKRTSPFLVTRPGFLAQIRRG*ILPRTT
Trigger: GGTTGTTCGTGGAAGAATCCATCCACGACGAATTTG...TGCCAAGAAGCCTGGTCTCGTTACCAAAAATGGACTTGTTCTTTTTGGTAACGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR CCA 90 bp AGACCAGTTGGGAGACTTGAGCAAAATTGTAGGAAAGAGGTAACAGGCCAGGTGAGTGGATCTGTCAAGTaGATCACCAATTTTCATCTT +
Preference number: 4 (lower is better)
Translates to: RPVGRLEQNCRKEVTGQVSGSVK*ITNFHL
Trigger: AAGATGAAAATTGGTGATCCACTTGACAGATCCACT...CACCTGGCCTGTTACCTCTTTCCTACAATTTTGCTCAAGTCTCCCAACTGGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CCA 90 bp TTAATCTTATGCTGTGTATATAGCACAGTGGCAAAGGGGAAAAATGACTTATCTCCCCGTACACCAAAGTaGCCCCTTCTTTCACTCCAG +
Preference number: 4 (lower is better)
Translates to: LILCCVYSTVAKGKNDLSPRTPK*PLLSLQ
Trigger: CTGGAGTGAAAGAAGGGGCCACTTTGGTGTACGGGG...AGATAAGTCATTTTTCCCCTTTGCCACTGTGCTATATACACAGCATAAGATTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000548418.1
CDS-3UTR CCA 90 bp CTTTTGGATAAAGCCTTCAAACTTGGTGGCCATATAGACATCTTCATTCTGCAAAAAAAGCCTGGCCTTTaGACTTGTCTTCCCCCGTAC +
Preference number: 4 (lower is better)
Translates to: LLDKAFKLGGHIDIFILQKKPGL*TCLPPY
Trigger: GTACGGGGGAAGACAAGTCCAAAGGCCAGGCTTTTT...TTGCAGAATGAAGATGTCTATATGGCCACCAAGTTTGAAGGCTTTATCCAAAAG
43% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR CCA 90 bp TTTAAACAGACGAGTGAAGTGACACTGTCTGACTTAAGCTTTGAACAGGACCGCCAAAGGATTCCTCTTTaGCGAGGTACATGTAGTCTT +
Preference number: 4 (lower is better)
Translates to: FKQTSEVTLSDLSFEQDRQRIPL*RGTCSL
Trigger: AAGACTACATGTACCTCGCCAAAGAGGAATCCTTTG...GCGGTCCTGTTCAAAGCTTAAGTCAGACAGTGTCACTTCACTCGTCTGTTTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CCA 90 bp ATTCTGCCAAGTCTCCAAAATGACAAATATTCCCTAAGGCTTCTTCAAAGCCAAGGCCCATACTGGAGTTaGGGAGGGTTGTTCATATCT +
Preference number: 4 (lower is better)
Translates to: ILPSLQNDKYSLRLLQSQGPYWS*GGLFIS
Trigger: AGATATGAACAACCCTCCCCAACTCCAGTATGGGCC...TTGGCTTTGAAGAAGCCTTAGGGAATATTTGTCATTTTGGAGACTTGGCAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR CAA 72 bp TTCAAGTTGCTAACAGCACAGCTCTTCATGATCTGTTaGCCAATAGGAGTGGATCCAGTGAAACCAAGTTTG +
Preference number: 4 (lower is better)
Translates to: FKLLTAQLFMIC*PIGVDPVKPSL
Trigger: CAAACTTGGTTTCACTGGATCCACTCCTATTGGCAAACAGATCATGAAGAGCTGTGCTGTTAGCAACTTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR TCA 90 bp TGCTACTGCTTTATCAACATCCGCCAAAGAAGCGTAGGATACTTTGCATATTGTACTTCAGCTTGTTTTTaGAATAAACCCGGCCAGTGG +
Preference number: 4 (lower is better)
Translates to: CYCFINIRQRSVGYFAYCTSACF*NKPGQW
Trigger: CCACTGGCCGGGTTTATTTCAAAAACAAGCTGAAGT...ACAATATGCAAAGTATCCTACGCTTCTTTGGCGGATGTTGATAAAGCAGTAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR TCA 90 bp TGTTGTTTAGTTTTTATTGATTCCCTACAATCCCCTCATGTTATTCTGCCAAGTCCTTGTCTGGAACTGTaGACACCCCTACTACTCGGT +
Preference number: 4 (lower is better)
Translates to: CCLVFIDSLQSPHVILPSPCLEL*TPLLLG
Trigger: ACCGAGTAGTAGGGGTGTTCACAGTTCCAGACAAGG...ACTTGGCAGAATAACATGAGGGGATTGTAGGGAATCAATAAAAACTAAACAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR TCA 90 bp ATTCTGCCAAGTCTCCAAAATGACAAATATTCCCTAAGGCTTCTTCAAAGCCAAGGGTTCAACATCACATaGTCTCTGAAGAAGGATGGG +
Preference number: 4 (lower is better)
Translates to: ILPSLQNDKYSLRLLQSQGFNIT*SLKKDG
Trigger: CCCATCCTTCTTCAGAGATCATGTGATGTTGAACCC...TTGGCTTTGAAGAAGCCTTAGGGAATATTTGTCATTTTGGAGACTTGGCAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR TCA 90 bp TGTTTGCCAATAGGAGTGGATCCAGTGAAACCAAGTTTGCGGATGTCAGGATGTTTTAAAGAAGTCTGTTaGGTCTTCAATAATGGGGAC +
Preference number: 4 (lower is better)
Translates to: CLPIGVDPVKPSLRMSGCFKEVC*VFNNGD
Trigger: GTCCCCATTATTGAAGACTCAACAGACTTCTTTAAA...ACATCCTGACATCCGCAAACTTGGTTTCACTGGATCCACTCCTATTGGCAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR TCA 90 bp ATCAACATCCGCCAAAGAAGCGTAGGATACTTTGCATATTGTAGATCCATCTGTTCTTGTAAAAACCCCTaGGGCCAAACCATACTCTGT +
Preference number: 4 (lower is better)
Translates to: INIRQRSVGYFAYCRSICSCKNP*GQTILC
Trigger: ACAGAGTATGGTTTGGCCTCAGGGGTTTTTACAAGA...ACAGATGGATCTACAATATGCAAAGTATCCTACGCTTCTTTGGCGGATGTTGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR TCA 90 bp TGGCTTGCATTTGTTCTGATGGCATGCATCTCTTCCCAAACTCTGTATTCAGTGAATAGCTGTGTGATTTaGGCAGGTTACTTAACCTCT +
Preference number: 4 (lower is better)
Translates to: WLAFVLMACISSQTLYSVNSCVI*AGYLTS
Trigger: AGAGGTTAAGTAACCTGCTCAAATCACACAGCTATT...CACTGAATACAGAGTTTGGGAAGAGATGCATGCCATCAGAACAAATGCAAGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR GCA 90 bp TGGCTTGCATTTGTTCTGATGGCATGCATCTCTTCCCAAACTCTGTATTCAGTGTTTCCATCTTCAAACTaGAGATTTCTCACCGTCAGT +
Preference number: 4 (lower is better)
Translates to: WLAFVLMACISSQTLYSVFPSSN*RFLTVS
Trigger: ACTGACGGTGAGAAATCTGCAGTTTGAAGATGGAAA...CACTGAATACAGAGTTTGGGAAGAGATGCATGCCATCAGAACAAATGCAAGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR GCA 90 bp TGCTTAAAGTGTCCACACCTCCCGATTCAGGTGATAATAAGATCACAGCTTCATTTTTGCTGCTGCTACTaGTTTATCAACATCCGCCAA +
Preference number: 4 (lower is better)
Translates to: CLKCPHLPIQVIIRSQLHFCCCY*FINIRQ
Trigger: TTGGCGGATGTTGATAAAGCAGTAGCAGCAGCAAAA...ATGAAGCTGTGATCTTATTATCACCTGAATCGGGAGGTGTGGACACTTTAAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR GCA 90 bp ATTCTGCCAAGTCTCCAAAATGACAAATATTCCCTAAGGCTTCTTCAAAGCCAAGTACTATTTGCTCGCTaGAACACTCCATCGATGTCC +
Preference number: 4 (lower is better)
Translates to: ILPSLQNDKYSLRLLQSQVLFAR*NTPSMS
Trigger: GGACATCGATGGAGTGTTGCAGCGAGCAAATAGTAC...TTGGCTTTGAAGAAGCCTTAGGGAATATTTGTCATTTTGGAGACTTGGCAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR GCA 90 bp ATTCTGCCAAGTCTCCAAAATGACAAATATTCCCTAAGGCTTCTTCAAAGCCAAAGGCACATGTGTAAATaGTTTAACATGGCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: ILPSLQNDKYSLRLLQSQRHMCK*FNMAWP
Trigger: GGGCCAGGCCATGTTAAAGCATTTACACATGTGCCT...TTGGCTTTGAAGAAGCCTTAGGGAATATTTGTCATTTTGGAGACTTGGCAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR GCA 90 bp ACTTGCAGAATTGTGTGTGTGCACATGAATTTTGGGGGTAGAAGCGGGACACAGCTTGTGTATTATAACTaGATGGTACTGACATCTTCA +
Preference number: 4 (lower is better)
Translates to: TCRIVCVHMNFGGRSGTQLVYYN*MVLTSS
Trigger: TGAAGATGTCAGTACCATGCAGTTATAATACACAAG...CTGTGTCCCGCTTCTACCCCCAAAATTCATGTGCACACACACAATTCTGCAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR GCA 90 bp TGGCTTGCATTTGTTCTGATGGCATGCATCTCTTCCCAAACTCTGTATTCAGTGATTAGATTACTATCTTaGCCAAGATCACACAGCCAG +
Preference number: 4 (lower is better)
Translates to: WLAFVLMACISSQTLYSVIRLLS*PRSHSQ
Trigger: CTGGCTGTGTGATCTTGGGCAAGATAGTAATCTAAT...CACTGAATACAGAGTTTGGGAAGAGATGCATGCCATCAGAACAAATGCAAGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CCA 90 bp CTGACGTCTCACCCGTTGAAAAGTACTGAGAGGCAGGGATCATTTTTCCATCTTGATAGAGCCGTGCTTTaGACTATCAATTATATCCAT +
Preference number: 4 (lower is better)
Translates to: LTSHPLKSTERQGSFFHLDRAVL*TINYIH
Trigger: ATGGATATAATTGATAGTCCAAAGCACGGCTCTATC...AAGATGGAAAAATGATCCCTGCCTCTCAGTACTTTTCAACGGGTGAGACGTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR CCA 90 bp GTCCCCATTTTGGAATTTAGAAATGACCATAATAGGCCCAAAGGATTCCTCTTTTCTCTTCAACCAGCCTaGCAACATCCATTGAGCTTG +
Preference number: 4 (lower is better)
Translates to: VPILEFRNDHNRPKGFLFSLQPA*QHPLSL
Trigger: CAAGCTCAATGGATGTTGCCAGGCTGGTTGAAGAGA...AAAGAGGAATCCTTTGGGCCTATTATGGTCATTTCTAAATTCCAAAATGGGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR CCA 90 bp TTTAAACAGACGAGTGAAGTGACACTGTCTGACTTAAGCTTTGAACAGGACCGCTTCCTCACGACCTTTTaGATAAAGCCTTCAAACTTG +
Preference number: 4 (lower is better)
Translates to: FKQTSEVTLSDLSFEQDRFLTTF*IKPSNL
Trigger: CAAGTTTGAAGGCTTTATCCAAAAGGTCGTGAGGAA...GCGGTCCTGTTCAAAGCTTAAGTCAGACAGTGTCACTTCACTCGTCTGTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CCA 90 bp TGGCTTGCATTTGTTCTGATGGCATGCATCTCTTCCCAAACTCTGTATTCAGTGTGTAGATCCATCTGTTaGGTTGATAGTGTCGTAAGT +
Preference number: 4 (lower is better)
Translates to: WLAFVLMACISSQTLYSVCRSIC*VDSVVS
Trigger: ACTTACGACACTATCAACCCAACAGATGGATCTACA...CACTGAATACAGAGTTTGGGAAGAGATGCATGCCATCAGAACAAATGCAAGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CCA 90 bp GTCCCCATTTTGGAATTTAGAAATGACCATAATAGGCCCAAAGGATTCCTCTTTGTTGCCAGCTCTTCTTaGTTCTCTTCCAGTAGGTCT +
Preference number: 4 (lower is better)
Translates to: VPILEFRNDHNRPKGFLFVASSS*FSSSRS
Trigger: AGACCTACTGGAAGAGAACCAAGAAGAGCTGGCAAC...AAAGAGGAATCCTTTGGGCCTATTATGGTCATTTCTAAATTCCAAAATGGGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR CCA 90 bp TGCTACTGCTTTATCAACATCCGCCAAAGAAGCGTAGGATACTTTGCATATTGTCGATTTGGACGGGCCTaGTTGATTGGAATAGTAGAA +
Preference number: 4 (lower is better)
Translates to: CYCFINIRQRSVGYFAYCRFGRA*LIGIVE
Trigger: TTCTACTATTCCAATCAACCAGGCCCGTCCAAATCG...ACAATATGCAAAGTATCCTACGCTTCTTTGGCGGATGTTGATAAAGCAGTAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR CCA 90 bp ATTCTGCCAAGTCTCCAAAATGACAAATATTCCCTAAGGCTTCTTCAAAGCCAAGTTGATGACCCCCTTTaGAAAGCCTGCTTTCACAGA +
Preference number: 4 (lower is better)
Translates to: ILPSLQNDKYSLRLLQSQVDDPL*KACFHR
Trigger: TCTGTGAAAGCAGGCTTTCCAAAGGGGGTCATCAAC...TTGGCTTTGAAGAAGCCTTAGGGAATATTTGTCATTTTGGAGACTTGGCAGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CCA 90 bp TTAATCTTATGCTGTGTATATAGCACAGTGGCAAAGGGGAAAAATGACTTATCTGGGGCCCATGATCAGTaGATCTGTCAAGTGGATCAC +
Preference number: 4 (lower is better)
Translates to: LILCCVYSTVAKGKNDLSGAHDQ*ICQVDH
Trigger: GTGATCCACTTGACAGATCCACTGATCATGGGCCCC...AGATAAGTCATTTTTCCCCTTTGCCACTGTGCTATATACACAGCATAAGATTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000548418.1
CDS-3UTR CCA 90 bp AGACCAGTTGGGAGACTTGAGCAAAATTGTAGGAAAGAGGTAACAGGCCAGGTGAGGGGAGAAACAGCTTaGTATTTTAGAAATACGTAT +
Preference number: 4 (lower is better)
Translates to: RPVGRLEQNCRKEVTGQVRGETA*YFRNTY
Trigger: ATACGTATTTCTAAAATACCAAGCTGTTTCTCCCCT...CACCTGGCCTGTTACCTCTTTCCTACAATTTTGCTCAAGTCTCCCAACTGGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CCA 90 bp TGTTGTTTAGTTTTTATTGATTCCCTACAATCCCCTCATGTTATTCTGCCAAGTGAGGCAGTGGTGTGCTaGTGCTGGCTTGCATTTGTT +
Preference number: 4 (lower is better)
Translates to: CCLVFIDSLQSPHVILPSEAVVC*CWLAFV
Trigger: AACAAATGCAAGCCAGCACCAGCACACCACTGCCTC...ACTTGGCAGAATAACATGAGGGGATTGTAGGGAATCAATAAAAACTAAACAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CCA 90 bp TTTAAACAGACGAGTGAAGTGACACTGTCTGACTTAAGCTTTGAACAGGACCGCGAATGTGGGGGCATATaGCCTATTTTAGAAAGCATA +
Preference number: 4 (lower is better)
Translates to: FKQTSEVTLSDLSFEQDRECGGI*PILESI
Trigger: TATGCTTTCTAAAATAGGCCATATGCCCCCACATTC...GCGGTCCTGTTCAAAGCTTAAGTCAGACAGTGTCACTTCACTCGTCTGTTTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CCA 90 bp ATTCTGCCAAGTCTCCAAAATGACAAATATTCCCTAAGGCTTCTTCAAAGCCAACTTGGAGGGCAGGTATaGGGAACCAAATTTGTTTCC +
Preference number: 4 (lower is better)
Translates to: ILPSLQNDKYSLRLLQSQLGGQV*GTKFVS
Trigger: GGAAACAAATTTGGTTCCCCATACCTGCCCTCCAAG...TTGGCTTTGAAGAAGCCTTAGGGAATATTTGTCATTTTGGAGACTTGGCAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR TCA 90 bp TGGCTTGCATTTGTTCTGATGGCATGCATCTCTTCCCAAACTCTGTATTCAGTGTTTAAAGAAGTCTGTTaGGTCTTCAATAATGGGGAC +
Preference number: 4 (lower is better)
Translates to: WLAFVLMACISSQTLYSVFKEVC*VFNNGD
Trigger: GTCCCCATTATTGAAGACTCAACAGACTTCTTTAAA...CACTGAATACAGAGTTTGGGAAGAGATGCATGCCATCAGAACAAATGCAAGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR TCA 90 bp TGGCTTGCATTTGTTCTGATGGCATGCATCTCTTCCCAAACTCTGTATTCAGTGTCACCGTCTTGGTTTTaGGATATTCATTTAGAGCTT +
Preference number: 4 (lower is better)
Translates to: WLAFVLMACISSQTLYSVSPSWF*DIHLEL
Trigger: AAGCTCTAAATGAATATCTCAAAACCAAGACGGTGA...CACTGAATACAGAGTTTGGGAAGAGATGCATGCCATCAGAACAAATGCAAGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR TCA 90 bp TTTAAACAGACGAGTGAAGTGACACTGTCTGACTTAAGCTTTGAACAGGACCGCTCACCGTCTTGGTTTTaGGATATTCATTTAGAGCTT +
Preference number: 4 (lower is better)
Translates to: FKQTSEVTLSDLSFEQDRSPSWF*DIHLEL
Trigger: AAGCTCTAAATGAATATCTCAAAACCAAGACGGTGA...GCGGTCCTGTTCAAAGCTTAAGTCAGACAGTGTCACTTCACTCGTCTGTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR TCA 90 bp TGTTGTTTAGTTTTTATTGATTCCCTACAATCCCCTCATGTTATTCTGCCAAGTTTTTTGGTTTGTGGCTaGCACCTCCTGCCTCAACAC +
Preference number: 4 (lower is better)
Translates to: CCLVFIDSLQSPHVILPSFLVCG*HLLPQH
Trigger: GTGTTGAGGCAGGAGGTGTCAGCCACAAACCAAAAA...ACTTGGCAGAATAACATGAGGGGATTGTAGGGAATCAATAAAAACTAAACAACA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR TCA 90 bp TGGCTTGCATTTGTTCTGATGGCATGCATCTCTTCCCAAACTCTGTATTCAGTGACACTGCTACTGAGATaGATATTAGAGGGTAAAGTA +
Preference number: 4 (lower is better)
Translates to: WLAFVLMACISSQTLYSVTLLLR*ILEGKV
Trigger: TACTTTACCCTCTAATATTCATCTCAGTAGCAGTGT...CACTGAATACAGAGTTTGGGAAGAGATGCATGCCATCAGAACAAATGCAAGCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR TCA 90 bp TGTTGTTTAGTTTTTATTGATTCCCTACAATCCCCTCATGTTATTCTGCCAAGTAACAAGTGGGAACGCTaGGGAGAAACACTTAGCCCA +
Preference number: 4 (lower is better)
Translates to: CCLVFIDSLQSPHVILPSNKWER*GETLSP
Trigger: TGGGCTAAGTGTTTCTCCTCAGCGTTCCCACTTGTT...ACTTGGCAGAATAACATGAGGGGATTGTAGGGAATCAATAAAAACTAAACAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR TCA 90 bp ATTCTGCCAAGTCTCCAAAATGACAAATATTCCCTAAGGCTTCTTCAAAGCCAATCATCAGATGATATTTaGGGAGAGACCTGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: ILPSLQNDKYSLRLLQSQSSDDI*GETCRK
Trigger: CTTCCTGCAGGTCTCTCCTCAAATATCATCTGATGA...TTGGCTTTGAAGAAGCCTTAGGGAATATTTGTCATTTTGGAGACTTGGCAGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR TCA 90 bp TGGCTTGCATTTGTTCTGATGGCATGCATCTCTTCCCAAACTCTGTATTCAGTGACAAGTACCTGTTCATaGAACTTACATTCTAATGGG +
Preference number: 4 (lower is better)
Translates to: WLAFVLMACISSQTLYSVTSTCS*NLHSNG
Trigger: CCCATTAGAATGTAAGTTTCATGAACAGGTACTTGT...CACTGAATACAGAGTTTGGGAAGAGATGCATGCCATCAGAACAAATGCAAGCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR TCA 90 bp ATTCTGCCAAGTCTCCAAAATGACAAATATTCCCTAAGGCTTCTTCAAAGCCAAACCAGATGCATTGCTTaGAAACCTGTTCTGCCACTT +
Preference number: 4 (lower is better)
Translates to: ILPSLQNDKYSLRLLQSQTRCIA*KPVLPL
Trigger: AAGTGGCAGAACAGGTTTTCAAGCAATGCATCTGGT...TTGGCTTTGAAGAAGCCTTAGGGAATATTTGTCATTTTGGAGACTTGGCAGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR GCA 90 bp TGGCTTGCATTTGTTCTGATGGCATGCATCTCTTCCCAAACTCTGTATTCAGTGAAACCGATTATAAAGTaGATCCACTGTATCATTGGG +
Preference number: 4 (lower is better)
Translates to: WLAFVLMACISSQTLYSVKPIIK*IHCIIG
Trigger: CCCAATGATACAGTGGATGCACTTTATAATCGGTTT...CACTGAATACAGAGTTTGGGAAGAGATGCATGCCATCAGAACAAATGCAAGCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR GCA 90 bp TGTTGTTTAGTTTTTATTGATTCCCTACAATCCCCTCATGTTATTCTGCCAAGTGATACCTTCATATGTTaGCCCTTCTTCTGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: CCLVFIDSLQSPHVILPSDTFIC*PFFWLG
Trigger: CCCCAGCCAGAAGAAGGGGCAACATATGAAGGTATC...ACTTGGCAGAATAACATGAGGGGATTGTAGGGAATCAATAAAAACTAAACAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR GCA 90 bp TTTAAACAGACGAGTGAAGTGACACTGTCTGACTTAAGCTTTGAACAGGACCGCAAAAGCATCTTTTGCTaGTGCTACTGCTTTATCAAC +
Preference number: 4 (lower is better)
Translates to: FKQTSEVTLSDLSFEQDRKSIFC*CYCFIN
Trigger: GTTGATAAAGCAGTAGCAGCAGCAAAAGATGCTTTT...GCGGTCCTGTTCAAAGCTTAAGTCAGACAGTGTCACTTCACTCGTCTGTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR GCA 90 bp GTCCCCATTTTGGAATTTAGAAATGACCATAATAGGCCCAAAGGATTCCTCTTTAAGGGCTTCAATAGTTaGCAGCTCTTCTTGGTTCTC +
Preference number: 4 (lower is better)
Translates to: VPILEFRNDHNRPKGFLFKGFNS*QLFLVL
Trigger: GAGAACCAAGAAGAGCTGGCAACTATTGAAGCCCTT...AAAGAGGAATCCTTTGGGCCTATTATGGTCATTTCTAAATTCCAAAATGGGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR GCA 90 bp TGTTGTTTAGTTTTTATTGATTCCCTACAATCCCCTCATGTTATTCTGCCAAGTCCCCTTTGGAAAGCCTaGTTTCACAGACAGTTCTGC +
Preference number: 4 (lower is better)
Translates to: CCLVFIDSLQSPHVILPSPLWKA*FHRQFC
Trigger: GCAGAACTGTCTGTGAAAGCAGGCTTTCCAAAGGGG...ACTTGGCAGAATAACATGAGGGGATTGTAGGGAATCAATAAAAACTAAACAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR GCA 90 bp ATTCTGCCAAGTCTCCAAAATGACAAATATTCCCTAAGGCTTCTTCAAAGCCAAGAAGGAAAGTGGAACTaGTTAAAGTGTCCACACCTC +
Preference number: 4 (lower is better)
Translates to: ILPSLQNDKYSLRLLQSQEGKWN*LKCPHL
Trigger: GAGGTGTGGACACTTTAAGCAGTTCCACTTTCCTTC...TTGGCTTTGAAGAAGCCTTAGGGAATATTTGTCATTTTGGAGACTTGGCAGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR GCA 90 bp TGTTGTTTAGTTTTTATTGATTCCCTACAATCCCCTCATGTTATTCTGCCAAGTGTGCTGGTGCTGGCTTaGATTTGTTCTGATGGCATG +
Preference number: 4 (lower is better)
Translates to: CCLVFIDSLQSPHVILPSVLVLA*ICSDGM
Trigger: CATGCCATCAGAACAAATGCAAGCCAGCACCAGCAC...ACTTGGCAGAATAACATGAGGGGATTGTAGGGAATCAATAAAAACTAAACAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CCA 90 bp ACATACATAGCTTTGTTTATGTCTCTTGTAAAAACCCCTGAGGCCAAACCATACAAAACTTCGGCAGACTaGTCCCAAGAAATCTCAGCA +
Preference number: 4 (lower is better)
Translates to: TYIALFMSLVKTPEAKPYKTSAD*SQEISA
Trigger: TGCTGAGATTTCTTGGGACCAGTCTGCCGAAGTTTT...GTATGGTTTGGCCTCAGGGGTTTTTACAAGAGACATAAACAAAGCTATGTATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR CCA 90 bp ATTCTGCCAAGTCTCCAAAATGACAAATATTCCCTAAGGCTTCTTCAAAGCCAAAAAACTTCGGCAGACTaGTCCCAAGAAATCTCAGCA +
Preference number: 4 (lower is better)
Translates to: ILPSLQNDKYSLRLLQSQKTSAD*SQEISA
Trigger: TGCTGAGATTTCTTGGGACCAGTCTGCCGAAGTTTT...TTGGCTTTGAAGAAGCCTTAGGGAATATTTGTCATTTTGGAGACTTGGCAGAAT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CCA 90 bp TCGTTACCAAAAAGAACAAGTCCATTTTTGGTAACGAGACCAGGCTTCTTGGCAAGCCTTCAAACTTGGTaGCCATATAGACATCTTCAT +
Preference number: 4 (lower is better)
Translates to: SLPKRTSPFLVTRPGFLASLQTW*PYRHLH
Trigger: ATGAAGATGTCTATATGGCCACCAAGTTTGAAGGCT...TGCCAAGAAGCCTGGTCTCGTTACCAAAAATGGACTTGTTCTTTTTGGTAACGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR CCA 90 bp ATTCTGCCAAGTCTCCAAAATGACAAATATTCCCTAAGGCTTCTTCAAAGCCAAACGGGCCTGGTTGATTaGAATAGTAGAACCCTGAAT +
Preference number: 4 (lower is better)
Translates to: ILPSLQNDKYSLRLLQSQTGLVD*NSRTLN
Trigger: ATTCAGGGTTCTACTATTCCAATCAACCAGGCCCGT...TTGGCTTTGAAGAAGCCTTAGGGAATATTTGTCATTTTGGAGACTTGGCAGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CCA 90 bp TCATTAATCTTATGCTGTGTATATAGCACAGTGGCAAAGGGGAAAAATGACTTAAAAAAGCCTGGCCTTTaGACTTGTCTTCCCCCGTAC +
Preference number: 4 (lower is better)
Translates to: SLILCCVYSTVAKGKNDLKKPGL*TCLPPY
Trigger: GTACGGGGGAAGACAAGTCCAAAGGCCAGGCTTTTT...TAAGTCATTTTTCCCCTTTGCCACTGTGCTATATACACAGCATAAGATTAATGA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000548418.1
CDS-3UTR CCA 90 bp TGTTGTTTAGTTTTTATTGATTCCCTACAATCCCCTCATGTTATTCTGCCAAGTGGCCCATACTGGAGTTaGGGAGGGTTGTTCATATCT +
Preference number: 4 (lower is better)
Translates to: CCLVFIDSLQSPHVILPSGPYWS*GGLFIS
Trigger: AGATATGAACAACCCTCCCCAACTCCAGTATGGGCC...ACTTGGCAGAATAACATGAGGGGATTGTAGGGAATCAATAAAAACTAAACAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CCA 90 bp TGTTGTTTAGTTTTTATTGATTCCCTACAATCCCCTCATGTTATTCTGCCAAGTTTTAAAAGGACTGAGTaGAGAGCGGGGAAGAGGTCG +
Preference number: 4 (lower is better)
Translates to: CCLVFIDSLQSPHVILPSFKRTE*RAGKRS
Trigger: CGACCTCTTCCCCGCTCTCCACTCAGTCCTTTTAAA...ACTTGGCAGAATAACATGAGGGGATTGTAGGGAATCAATAAAAACTAAACAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000652515.1
CDS-3UTR TCA 90 bp ATTCTGCCAAGTCTCCAAAATGACAAATATTCCCTAAGGCTTCTTCAAAGCCAACTTCTACCATGGCCTTaGTTCCTTCAGGAAAAAGAA +
Preference number: 4 (lower is better)
Translates to: ILPSLQNDKYSLRLLQSQLLPWP*FLQEKE
Trigger: TTCTTTTTCCTGAAGGAATCAAGGCCATGGTAGAAG...TTGGCTTTGAAGAAGCCTTAGGGAATATTTGTCATTTTGGAGACTTGGCAGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR TCA 90 bp ATTCTGCCAAGTCTCCAAAATGACAAATATTCCCTAAGGCTTCTTCAAAGCCAATCGAGCCATAGAAAGTaGCCATCTGTCCATTTATCT +
Preference number: 4 (lower is better)
Translates to: ILPSLQNDKYSLRLLQSQSSHRK*PSVHLS
Trigger: AGATAAATGGACAGATGGTCACTTTCTATGGCTCGA...TTGGCTTTGAAGAAGCCTTAGGGAATATTTGTCATTTTGGAGACTTGGCAGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR TCA 90 bp TGTTGTTTAGTTTTTATTGATTCCCTACAATCCCCTCATGTTATTCTGCCAAGTGTGGCTCTTTCTTGGTaGAGGTCAGATTGCGATTTG +
Preference number: 4 (lower is better)
Translates to: CCLVFIDSLQSPHVILPSVALSW*RSDCDL
Trigger: CAAATCGCAATCTGACCTTCACCAAGAAAGAGCCAC...ACTTGGCAGAATAACATGAGGGGATTGTAGGGAATCAATAAAAACTAAACAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR GCA 90 bp TCGTTACCAAAAAGAACAAGTCCATTTTTGGTAACGAGACCAGGCTTCTTGGCAAAAAGCATCTTTTGCTaGTGCTACTGCTTTATCAAC +
Preference number: 4 (lower is better)
Translates to: SLPKRTSPFLVTRPGFLAKSIFC*CYCFIN
Trigger: GTTGATAAAGCAGTAGCAGCAGCAAAAGATGCTTTT...TGCCAAGAAGCCTGGTCTCGTTACCAAAAATGGACTTGTTCTTTTTGGTAACGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR GCA 90 bp TGCTTAAAGTGTCCACACCTCCCGATTCAGGTGATAATAAGATCACAGCTTCATTTTCACAGACAGTTCTaGAAACTTCAAAGCAGTCAA +
Preference number: 4 (lower is better)
Translates to: CLKCPHLPIQVIIRSQLHFHRQF*KLQSSQ
Trigger: TTGACTGCTTTGAAGTTTGCAGAACTGTCTGTGAAA...ATGAAGCTGTGATCTTATTATCACCTGAATCGGGAGGTGTGGACACTTTAAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR GCA 90 bp TCGTTACCAAAAAGAACAAGTCCATTTTTGGTAACGAGACCAGGCTTCTTGGCATTTCACAGACAGTTCTaGAAACTTCAAAGCAGTCAA +
Preference number: 4 (lower is better)
Translates to: SLPKRTSPFLVTRPGFLAFHRQF*KLQSSQ
Trigger: TTGACTGCTTTGAAGTTTGCAGAACTGTCTGTGAAA...TGCCAAGAAGCCTGGTCTCGTTACCAAAAATGGACTTGTTCTTTTTGGTAACGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR GCA 90 bp TTTAAACAGACGAGTGAAGTGACACTGTCTGACTTAAGCTTTGAACAGGACCGCTCCAAAAATCCAAATTaGAGGTGGGATCATTTTAGA +
Preference number: 4 (lower is better)
Translates to: FKQTSEVTLSDLSFEQDRSKNPN*RWDHFR
Trigger: TCTAAAATGATCCCACCTGCAATTTGGATTTTTGGA...GCGGTCCTGTTCAAAGCTTAAGTCAGACAGTGTCACTTCACTCGTCTGTTTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652515.1
CDS-3UTR CCA 90 bp TGTTGTTTAGTTTTTATTGATTCCCTACAATCCCCTCATGTTATTCTGCCAAGTTGTCCAAAGAGGCTCTaGCCAATTAGTGCCAACTTC +
Preference number: 4 (lower is better)
Translates to: CCLVFIDSLQSPHVILPSCPKRL*PISANF
Trigger: GAAGTTGGCACTAATTGGCCAGAGCCTCTTTGGACA...ACTTGGCAGAATAACATGAGGGGATTGTAGGGAATCAATAAAAACTAAACAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CCA 90 bp TGTTGTTTAGTTTTTATTGATTCCCTACAATCCCCTCATGTTATTCTGCCAAGTGTTGCCAGCTCTTCTTaGTTCTCTTCCAGTAGGTCT +
Preference number: 4 (lower is better)
Translates to: CCLVFIDSLQSPHVILPSVASSS*FSSSRS
Trigger: AGACCTACTGGAAGAGAACCAAGAAGAGCTGGCAAC...ACTTGGCAGAATAACATGAGGGGATTGTAGGGAATCAATAAAAACTAAACAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CCA 90 bp TTTAAACAGACGAGTGAAGTGACACTGTCTGACTTAAGCTTTGAACAGGACCGCATTAAATATTATAAGTaGAGACTTGCCACCAAGCTC +
Preference number: 4 (lower is better)
Translates to: FKQTSEVTLSDLSFEQDRIKYYK*RLATKL
Trigger: GAGCTTGGTGGCAAGTCTCCACTTATAATATTTAAT...GCGGTCCTGTTCAAAGCTTAAGTCAGACAGTGTCACTTCACTCGTCTGTTTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CCA 90 bp TTAATCTTATGCTGTGTATATAGCACAGTGGCAAAGGGGAAAAATGACTTATCTCTCCATGAAAAAGCCTaGCCTTTGGACTTGTCTTCC +
Preference number: 4 (lower is better)
Translates to: LILCCVYSTVAKGKNDLSLHEKA*PLDLSS
Trigger: GGAAGACAAGTCCAAAGGCCAGGCTTTTTCATGGAG...AGATAAGTCATTTTTCCCCTTTGCCACTGTGCTATATACACAGCATAAGATTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000548418.1
CDS-3UTR CCA 90 bp ATTCTGCCAAGTCTCCAAAATGACAAATATTCCCTAAGGCTTCTTCAAAGCCAACAAAGGATTCCTCTTTaGCGAGGTACATGTAGTCTT +
Preference number: 4 (lower is better)
Translates to: ILPSLQNDKYSLRLLQSQQRIPL*RGTCSL
Trigger: AAGACTACATGTACCTCGCCAAAGAGGAATCCTTTG...TTGGCTTTGAAGAAGCCTTAGGGAATATTTGTCATTTTGGAGACTTGGCAGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CCA 90 bp TGCTTAAAGTGTCCACACCTCCCGATTCAGGTGATAATAAGATCACAGCTTCATATTTCTTCAATGCTATaGTCCAAACGCCTTGTTAAG +
Preference number: 4 (lower is better)
Translates to: CLKCPHLPIQVIIRSQLHISSML*SKRLVK
Trigger: CTTAACAAGGCGTTTGGACCATAGCATTGAAGAAAT...ATGAAGCTGTGATCTTATTATCACCTGAATCGGGAGGTGTGGACACTTTAAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR CAA 72 bp GGTTACTTAACCTCTCCATTTGAAAGCAAACATTTATaGGGCTCCTGTTACACATTAGGACTGGAGATACAG +
Preference number: 4 (lower is better)
Translates to: GYLTSPFESKHL*GSCYTLGLEIQ
Trigger: CTGTATCTCCAGTCCTAATGTGTAACAGGAGCCCAATAAATGTTTGCTTTCAAATGGAGAGGTTAAGTAACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
3UTR CAA 72 bp TTAAAGAAGTCTGTTGAGTCTTCAATAATGGGGACATaGCTTAAAATTCCAGCCCAGATGACCTTGATGGTC +
Preference number: 4 (lower is better)
Translates to: LKKSVESSIMGT*LKIPAQMTLMV
Trigger: GACCATCAAGGTCATCTGGGCTGGAATTTTAAGCAATGTCCCCATTATTGAAGACTCAACAGACTTCTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR TCA 90 bp TGTTGTTTAGTTTTTATTGATTCCCTACAATCCCCTCATGTTATTCTGCCAAGTCCAGGGACTTTATCATaGCCTCGAATCCAGTTATGT +
Preference number: 4 (lower is better)
Translates to: CCLVFIDSLQSPHVILPSPGTLS*PRIQLC
Trigger: ACATAACTGGATTCGAGGTCATGATAAAGTCCCTGG...ACTTGGCAGAATAACATGAGGGGATTGTAGGGAATCAATAAAAACTAAACAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR TCA 90 bp TGTTGTTTAGTTTTTATTGATTCCCTACAATCCCCTCATGTTATTCTGCCAAGTCCTGGCAACATCCATTaGGCTTGCTCCAGATTTAAA +
Preference number: 4 (lower is better)
Translates to: CCLVFIDSLQSPHVILPSPGNIH*ACSRFK
Trigger: TTTAAATCTGGAGCAAGCTCAATGGATGTTGCCAGG...ACTTGGCAGAATAACATGAGGGGATTGTAGGGAATCAATAAAAACTAAACAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR TCA 90 bp TGTTGTTTAGTTTTTATTGATTCCCTACAATCCCCTCATGTTATTCTGCCAAGTTCTTGTAAAAACCCCTaGGGCCAAACCATACTCTGT +
Preference number: 4 (lower is better)
Translates to: CCLVFIDSLQSPHVILPSSCKNP*GQTILC
Trigger: ACAGAGTATGGTTTGGCCTCAGGGGTTTTTACAAGA...ACTTGGCAGAATAACATGAGGGGATTGTAGGGAATCAATAAAAACTAAACAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR TCA 90 bp ATTCTGCCAAGTCTCCAAAATGACAAATATTCCCTAAGGCTTCTTCAAAGCCAACTAGGAATTGATGATTaGAAAGGGTTGTGGGAAATG +
Preference number: 4 (lower is better)
Translates to: ILPSLQNDKYSLRLLQSQLGIDD*KGLWEM
Trigger: CATTTCCCACAACCCTTTTCAATCATCAATTCCTAG...TTGGCTTTGAAGAAGCCTTAGGGAATATTTGTCATTTTGGAGACTTGGCAGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR TCA 90 bp ATTCTGCCAAGTCTCCAAAATGACAAATATTCCCTAAGGCTTCTTCAAAGCCAAGAAAATTTACTCACCTaGCTACTTCTGTCTGCCAAT +
Preference number: 4 (lower is better)
Translates to: ILPSLQNDKYSLRLLQSQENLLT*LLLSAN
Trigger: ATTGGCAGACAGAAGTAGTCAGGTGAGTAAATTTTC...TTGGCTTTGAAGAAGCCTTAGGGAATATTTGTCATTTTGGAGACTTGGCAGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR TCA 90 bp ATTCTGCCAAGTCTCCAAAATGACAAATATTCCCTAAGGCTTCTTCAAAGCCAAGTCACACATAGATGGTaGAAATTTACTCACCTGACT +
Preference number: 4 (lower is better)
Translates to: ILPSLQNDKYSLRLLQSQVTHRW*KFTHLT
Trigger: AGTCAGGTGAGTAAATTTTCACCATCTATGTGTGAC...TTGGCTTTGAAGAAGCCTTAGGGAATATTTGTCATTTTGGAGACTTGGCAGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR TCA 90 bp TGTTGTTTAGTTTTTATTGATTCCCTACAATCCCCTCATGTTATTCTGCCAAGTTCATCAGATGATATTTaGGGAGAGACCTGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: CCLVFIDSLQSPHVILPSSSDDI*GETCRK
Trigger: CTTCCTGCAGGTCTCTCCTCAAATATCATCTGATGA...ACTTGGCAGAATAACATGAGGGGATTGTAGGGAATCAATAAAAACTAAACAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR GCA 90 bp CTTTTGGATAAAGCCTTCAAACTTGGTGGCCATATAGACATCTTCATTCTGCAATTTCCATCTTCAAACTaGAGATTTCTCACCGTCAGT +
Preference number: 4 (lower is better)
Translates to: LLDKAFKLGGHIDIFILQFPSSN*RFLTVS
Trigger: ACTGACGGTGAGAAATCTGCAGTTTGAAGATGGAAA...TTGCAGAATGAAGATGTCTATATGGCCACCAAGTTTGAAGGCTTTATCCAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR GCA 90 bp TGCTTAAAGTGTCCACACCTCCCGATTCAGGTGATAATAAGATCACAGCTTCATAATAAAAACAGTTCCTaGTTCCAGTTTTTCACTCAC +
Preference number: 4 (lower is better)
Translates to: CLKCPHLPIQVIIRSQLHNKNSS*FQFFTH
Trigger: GTGAGTGAAAAACTGGAAGCAGGAACTGTTTTTATT...ATGAAGCTGTGATCTTATTATCACCTGAATCGGGAGGTGTGGACACTTTAAGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR GCA 90 bp ATTCTGCCAAGTCTCCAAAATGACAAATATTCCCTAAGGCTTCTTCAAAGCCAATGTGATTCAGAAATTTaGCGCCTTCTAGTCACACAT +
Preference number: 4 (lower is better)
Translates to: ILPSLQNDKYSLRLLQSQCDSEI*RLLVTH
Trigger: ATGTGTGACTAGAAGGCGGCAAATTTCTGAATCACA...TTGGCTTTGAAGAAGCCTTAGGGAATATTTGTCATTTTGGAGACTTGGCAGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CCA 90 bp TCAATAATGGGGACATTGCTTAAAATTCCAGCCCAGATGACCTTGATGGTCTCTATTAAATATTATAAGTaGAGACTTGCCACCAAGCTC +
Preference number: 4 (lower is better)
Translates to: SIMGTLLKIPAQMTLMVSIKYYK*RLATKL
Trigger: GAGCTTGGTGGCAAGTCTCCACTTATAATATTTAAT...AGAGACCATCAAGGTCATCTGGGCTGGAATTTTAAGCAATGTCCCCATTATTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR CCA 90 bp TGCTTAAAGTGTCCACACCTCCCGATTCAGGTGATAATAAGATCACAGCTTCATAGGGGAGAAACAGCTTaGTATTTTAGAAATACGTAT +
Preference number: 4 (lower is better)
Translates to: CLKCPHLPIQVIIRSQLHRGETA*YFRNTY
Trigger: ATACGTATTTCTAAAATACCAAGCTGTTTCTCCCCT...ATGAAGCTGTGATCTTATTATCACCTGAATCGGGAGGTGTGGACACTTTAAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CCA 90 bp ATTCTGCCAAGTCTCCAAAATGACAAATATTCCCTAAGGCTTCTTCAAAGCCAAGAATGTGGGGGCATATaGCCTATTTTAGAAAGCATA +
Preference number: 4 (lower is better)
Translates to: ILPSLQNDKYSLRLLQSQECGGI*PILESI
Trigger: TATGCTTTCTAAAATAGGCCATATGCCCCCACATTC...TTGGCTTTGAAGAAGCCTTAGGGAATATTTGTCATTTTGGAGACTTGGCAGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR TCA 90 bp CTTTTGGATAAAGCCTTCAAACTTGGTGGCCATATAGACATCTTCATTCTGCAATCACCGTCTTGGTTTTaGGATATTCATTTAGAGCTT +
Preference number: 4 (lower is better)
Translates to: LLDKAFKLGGHIDIFILQSPSWF*DIHLEL
Trigger: AAGCTCTAAATGAATATCTCAAAACCAAGACGGTGA...TTGCAGAATGAAGATGTCTATATGGCCACCAAGTTTGAAGGCTTTATCCAAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR TCA 90 bp TGTTGTTTAGTTTTTATTGATTCCCTACAATCCCCTCATGTTATTCTGCCAAGTATAATGTTTCTAGGTTaGTCACCCATCACAGTGGGT +
Preference number: 4 (lower is better)
Translates to: CCLVFIDSLQSPHVILPSIMFLG*SPITVG
Trigger: ACCCACTGTGATGGGTGATCAACCTAGAAACATTAT...ACTTGGCAGAATAACATGAGGGGATTGTAGGGAATCAATAAAAACTAAACAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR TCA 90 bp TGTTGTTTAGTTTTTATTGATTCCCTACAATCCCCTCATGTTATTCTGCCAAGTTTTTGGAGACTCATGTaGTTCAGAAATTTGCCGCCT +
Preference number: 4 (lower is better)
Translates to: CCLVFIDSLQSPHVILPSFWRLM*FRNLPP
Trigger: AGGCGGCAAATTTCTGAATCACATGAGTCTCCAAAA...ACTTGGCAGAATAACATGAGGGGATTGTAGGGAATCAATAAAAACTAAACAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR TCA 90 bp ATTCTGCCAAGTCTCCAAAATGACAAATATTCCCTAAGGCTTCTTCAAAGCCAAACAAGTACCTGTTCATaGAACTTACATTCTAATGGG +
Preference number: 4 (lower is better)
Translates to: ILPSLQNDKYSLRLLQSQTSTCS*NLHSNG
Trigger: CCCATTAGAATGTAAGTTTCATGAACAGGTACTTGT...TTGGCTTTGAAGAAGCCTTAGGGAATATTTGTCATTTTGGAGACTTGGCAGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR GCA 90 bp CTTTTGGATAAAGCCTTCAAACTTGGTGGCCATATAGACATCTTCATTCTGCAATTCAAAAGCATCTTTTaGTGCTGCTACTGCTTTATC +
Preference number: 4 (lower is better)
Translates to: LLDKAFKLGGHIDIFILQFKSIF*CCYCFI
Trigger: GATAAAGCAGTAGCAGCAGCAAAAGATGCTTTTGAA...TTGCAGAATGAAGATGTCTATATGGCCACCAAGTTTGAAGGCTTTATCCAAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR GCA 90 bp TGTTGTTTAGTTTTTATTGATTCCCTACAATCCCCTCATGTTATTCTGCCAAGTATACTCTGTACTATTTaGTCGCTGCAACACTCCATC +
Preference number: 4 (lower is better)
Translates to: CCLVFIDSLQSPHVILPSILCTI*SLQHSI
Trigger: GATGGAGTGTTGCAGCGAGCAAATAGTACAGAGTAT...ACTTGGCAGAATAACATGAGGGGATTGTAGGGAATCAATAAAAACTAAACAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR GCA 90 bp TGCTACTGCTTTATCAACATCCGCCAAAGAAGCGTAGGATACTTTGCATATTGTAATAAAAACAGTTCCTaGTTCCAGTTTTTCACTCAC +
Preference number: 4 (lower is better)
Translates to: CYCFINIRQRSVGYFAYCNKNSS*FQFFTH
Trigger: GTGAGTGAAAAACTGGAAGCAGGAACTGTTTTTATT...ACAATATGCAAAGTATCCTACGCTTCTTTGGCGGATGTTGATAAAGCAGTAGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR GCA 90 bp TGTTGTTTAGTTTTTATTGATTCCCTACAATCCCCTCATGTTATTCTGCCAAGTTGTGGCATTTTTCAGTaGTGCTGTATCAGGCATTGT +
Preference number: 4 (lower is better)
Translates to: CCLVFIDSLQSPHVILPSCGIFQ*CCIRHC
Trigger: ACAATGCCTGATACAGCAGCACTGAAAAATGCCACA...ACTTGGCAGAATAACATGAGGGGATTGTAGGGAATCAATAAAAACTAAACAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR GCA 90 bp TGTTGTTTAGTTTTTATTGATTCCCTACAATCCCCTCATGTTATTCTGCCAAGTTTTGTTCTGATGGCATaGATCTCTTCCCAAACTCTG +
Preference number: 4 (lower is better)
Translates to: CCLVFIDSLQSPHVILPSFVLMA*ISSQTL
Trigger: CAGAGTTTGGGAAGAGATGCATGCCATCAGAACAAA...ACTTGGCAGAATAACATGAGGGGATTGTAGGGAATCAATAAAAACTAAACAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR GCA 90 bp ATTCTGCCAAGTCTCCAAAATGACAAATATTCCCTAAGGCTTCTTCAAAGCCAAAAATACACATTACTCTaGAACTGTCTTGTGTCGGTT +
Preference number: 4 (lower is better)
Translates to: ILPSLQNDKYSLRLLQSQKYTLL*NCLVSV
Trigger: AACCGACACAAGACAGTTGCAGAGTAATGTGTATTT...TTGGCTTTGAAGAAGCCTTAGGGAATATTTGTCATTTTGGAGACTTGGCAGAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652515.1
CDS-3UTR CCA 90 bp GTCCCCATTTTGGAATTTAGAAATGACCATAATAGGCCCAAAGGATTCCTCTTTGCATTTTCCTTTTTCTaGATACCTTCATATGTTGCC +
Preference number: 4 (lower is better)
Translates to: VPILEFRNDHNRPKGFLFAFSFF*IPSYVA
Trigger: GGCAACATATGAAGGTATCCAGAAAAAGGAAAATGC...AAAGAGGAATCCTTTGGGCCTATTATGGTCATTTCTAAATTCCAAAATGGGGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR CCA 90 bp TCATTAATCTTATGCTGTGTATATAGCACAGTGGCAAAGGGGAAAAATGACTTACAAAGGATTCCTCTTTaGCGAGGTACATGTAGTCTT +
Preference number: 4 (lower is better)
Translates to: SLILCCVYSTVAKGKNDLQRIPL*RGTCSL
Trigger: AAGACTACATGTACCTCGCCAAAGAGGAATCCTTTG...TAAGTCATTTTTCCCCTTTGCCACTGTGCTATATACACAGCATAAGATTAATGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548418.1
CDS-3UTR CCA 90 bp TGTTGTTTAGTTTTTATTGATTCCCTACAATCCCCTCATGTTATTCTGCCAAGTCTTTTTAGGTTAGACTaGGGAGTAACTTTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: CCLVFIDSLQSPHVILPSLFRLD*GVTFPG
Trigger: ACCTGGGAAAGTTACTCCCCAGTCTAACCTAAAAAG...ACTTGGCAGAATAACATGAGGGGATTGTAGGGAATCAATAAAAACTAAACAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000652515.1
3UTR CAA 72 bp TCAAGTTCACAGTCATTAAATATTATAAGTGGAGACTaGCCACCAAGCTCAAGGGAAACTTTCTTCAAGTTG +
Preference number: 4 (lower is better)
Translates to: SSSQSLNIISGD*PPSSRETFFKL
Trigger: CAACTTGAAGAAAGTTTCCCTTGAGCTTGGTGGCAAGTCTCCACTTATAATATTTAATGACTGTGAACTTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR TCA 90 bp TGTTGTTTAGTTTTTATTGATTCCCTACAATCCCCTCATGTTATTCTGCCAAGTAAACTCTGTATTCAGTaGAGGCAAATTAGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: CCLVFIDSLQSPHVILPSKLCIQ*RQISGS
Trigger: TGAGCCACTAATTTGCCTTCACTGAATACAGAGTTT...ACTTGGCAGAATAACATGAGGGGATTGTAGGGAATCAATAAAAACTAAACAACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR TCA 90 bp TCATTAATCTTATGCTGTGTATATAGCACAGTGGCAAAGGGGAAAAATGACTTAAAGTTACATTGTGTCTaGAGAACCTACCCATTTTGG +
Preference number: 4 (lower is better)
Translates to: SLILCCVYSTVAKGKNDLKLHCV*RTYPFW
Trigger: CCAAAATGGGTAGGTTCTTCAGACACAATGTAACTT...TAAGTCATTTTTCCCCTTTGCCACTGTGCTATATACACAGCATAAGATTAATGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000548418.1
CDS-3UTR GCA 90 bp ATTCTGCCAAGTCTCCAAAATGACAAATATTCCCTAAGGCTTCTTCAAAGCCAATTTTCCTTGTACTATTaGCATTTTTCATTGTGTGGC +
Preference number: 4 (lower is better)
Translates to: ILPSLQNDKYSLRLLQSQFSLYY*HFSLCG
Trigger: GCCACACAATGAAAAATGGCAATAGTACAAGGAAAA...TTGGCTTTGAAGAAGCCTTAGGGAATATTTGTCATTTTGGAGACTTGGCAGAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CCA 90 bp TGTTGTTTAGTTTTTATTGATTCCCTACAATCCCCTCATGTTATTCTGCCAAGTTTCCTCACGACCTTTTaGATAAAGCCTTCAAACTTG +
Preference number: 4 (lower is better)
Translates to: CCLVFIDSLQSPHVILPSFLTTF*IKPSNL
Trigger: CAAGTTTGAAGGCTTTATCCAAAAGGTCGTGAGGAA...ACTTGGCAGAATAACATGAGGGGATTGTAGGGAATCAATAAAAACTAAACAACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CCA 90 bp TGTTGTTTAGTTTTTATTGATTCCCTACAATCCCCTCATGTTATTCTGCCAAGTTCTGCCAATGGGAAATaGGCTGTTAATAGTTTCCAT +
Preference number: 4 (lower is better)
Translates to: CCLVFIDSLQSPHVILPSSANGK*AVNSFH
Trigger: ATGGAAACTATTAACAGCCCATTTCCCATTGGCAGA...ACTTGGCAGAATAACATGAGGGGATTGTAGGGAATCAATAAAAACTAAACAACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CCA 90 bp TGTTGTTTAGTTTTTATTGATTCCCTACAATCCCCTCATGTTATTCTGCCAAGTCTCTGTTTATCATGCTaGGATCAAACCTCCTATTCT +
Preference number: 4 (lower is better)
Translates to: CCLVFIDSLQSPHVILPSLCLSC*DQTSYS
Trigger: AGAATAGGAGGTTTGATCCCAGCATGATAAACAGAG...ACTTGGCAGAATAACATGAGGGGATTGTAGGGAATCAATAAAAACTAAACAACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR TCA 90 bp TGTTGTTTAGTTTTTATTGATTCCCTACAATCCCCTCATGTTATTCTGCCAAGTACACTGCTACTGAGATaGATATTAGAGGGTAAAGTA +
Preference number: 4 (lower is better)
Translates to: CCLVFIDSLQSPHVILPSTLLLR*ILEGKV
Trigger: TACTTTACCCTCTAATATTCATCTCAGTAGCAGTGT...ACTTGGCAGAATAACATGAGGGGATTGTAGGGAATCAATAAAAACTAAACAACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR TCA 90 bp TGTTGTTTAGTTTTTATTGATTCCCTACAATCCCCTCATGTTATTCTGCCAAGTCTTAACCTCTCCATTTaGAAGCAAACATTTATTGGG +
Preference number: 4 (lower is better)
Translates to: CCLVFIDSLQSPHVILPSLNLSI*KQTFIG
Trigger: CCCAATAAATGTTTGCTTTCAAATGGAGAGGTTAAG...ACTTGGCAGAATAACATGAGGGGATTGTAGGGAATCAATAAAAACTAAACAACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CCA 90 bp TGTTGTTTAGTTTTTATTGATTCCCTACAATCCCCTCATGTTATTCTGCCAAGTGATAGAGCCGTGCTTTaGACTATCAATTATATCCAT +
Preference number: 4 (lower is better)
Translates to: CCLVFIDSLQSPHVILPSDRAVL*TINYIH
Trigger: ATGGATATAATTGATAGTCCAAAGCACGGCTCTATC...ACTTGGCAGAATAACATGAGGGGATTGTAGGGAATCAATAAAAACTAAACAACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CCA 90 bp TCATTAATCTTATGCTGTGTATATAGCACAGTGGCAAAGGGGAAAAATGACTTAAGTGGATCTGTCAAGTaGATCACCAATTTTCATCTT +
Preference number: 4 (lower is better)
Translates to: SLILCCVYSTVAKGKNDLSGSVK*ITNFHL
Trigger: AAGATGAAAATTGGTGATCCACTTGACAGATCCACT...TAAGTCATTTTTCCCCTTTGCCACTGTGCTATATACACAGCATAAGATTAATGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000548418.1
CDS-3UTR GCA 90 bp TGTTGTTTAGTTTTTATTGATTCCCTACAATCCCCTCATGTTATTCTGCCAAGTAATAAAAACAGTTCCTaGTTCCAGTTTTTCACTCAC +
Preference number: 4 (lower is better)
Translates to: CCLVFIDSLQSPHVILPSNKNSS*FQFFTH
Trigger: GTGAGTGAAAAACTGGAAGCAGGAACTGTTTTTATT...ACTTGGCAGAATAACATGAGGGGATTGTAGGGAATCAATAAAAACTAAACAACA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CCA 90 bp TCATTAATCTTATGCTGTGTATATAGCACAGTGGCAAAGGGGAAAAATGACTTAAAAAGCCCATTATGTTaGCCATTAATTGAAGCTGAA +
Preference number: 4 (lower is better)
Translates to: SLILCCVYSTVAKGKNDLKSPLC*PLIEAE
Trigger: TTCAGCTTCAATTAATGGCCAACATAATGGGCTTTT...TAAGTCATTTTTCCCCTTTGCCACTGTGCTATATACACAGCATAAGATTAATGA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000548418.1
CDS GCA 90 bp AATGGTGGCGAAGCCCGAGCCGGGTCGCAAGACGCCCGCTGGCACTaGCGGCGCCATGGCGGCCGCCTTCGGCCACGGCGGAGGACTCGC +
Preference number: 5 (lower is better)
Translates to: NGGEARAGSQDARWH*RRHGGRLRPRRRTR
Trigger: GCGAGTCCTCCGCCGTGGCCGAAGGCGGCCGCCATGGCGCCGGCAGTGCCAGCGGGCGTCTTGCGACCCGGCTCGGGCTTCGCCACCATT
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652515.1
CDS CCA 90 bp ACAGTGAATGGTGGCGAAGCCCGAGCCGGGTCGCAAGACGCCCGCTaGCACTGCCGGCGCCATGGCGGCCGCCTTCGGCCACGGCGGAGG +
Preference number: 5 (lower is better)
Translates to: TVNGGEARAGSQDAR*HCRRHGGRLRPRRR
Trigger: CCTCCGCCGTGGCCGAAGGCGGCCGCCATGGCGCCGGCAGTGCCAGCGGGCGTCTTGCGACCCGGCTCGGGCTTCGCCACCATTCACTGT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652515.1
CDS CCA 90 bp GGCGAAATTAGAGTGCCGAAGTGGCTTGAGAAGCACAGTGAATGGTaGCGAAGCCCGAGCCGGGTCGCAAGACGCCCGCTGGCACTGCCG +
Preference number: 5 (lower is better)
Translates to: GEIRVPKWLEKHSEW*RSPSRVARRPLALP
Trigger: CGGCAGTGCCAGCGGGCGTCTTGCGACCCGGCTCGGGCTTCGCCACCATTCACTGTGCTTCTCAAGCCACTTCGGCACTCTAATTTCGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652515.1
CDS CCA 90 bp CAGGGCGAAATTAGAGTGCCGAAGTGGCTTGAGAAGCACAGTGAATaGTGGCGAAGCCCGAGCCGGGTCGCAAGACGCCCGCTGGCACTG +
Preference number: 5 (lower is better)
Translates to: QGEIRVPKWLEKHSE*WRSPSRVARRPLAL
Trigger: CAGTGCCAGCGGGCGTCTTGCGACCCGGCTCGGGCTTCGCCACCATTCACTGTGCTTCTCAAGCCACTTCGGCACTCTAATTTCGCCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652515.1
CDS-3UTR CAA 90 bp ACCAGCACACCCCTGGGAAGAGGAAGAATAAGGACAGAGGCCCTGAGGCAGGAGAGGGAAACAGGCTTGTaGGAAGAAGCGCCTGGTCAG +
Preference number: 5 (lower is better)
Translates to: TSTPLGRGRIRTEALRQERETGL*EEAPGQ
Trigger: CTGACCAGGCGCTTCTTCCAACAAGCCTGTTTCCCT...CTCCTGCCTCAGGGCCTCTGTCCTTATTCTTCCTCTTCCCAGGGGTGTGCTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652515.1
CDS-3UTR CAA 90 bp ACCAGCACACCCCTGGGAAGAGGAAGAATAAGGACAGAGGCCCTGAGGCAGGAGGCTTCTGCCACTTCTTaGATGGTCTTGCCCTTGACC +
Preference number: 5 (lower is better)
Translates to: TSTPLGRGRIRTEALRQEASATS*MVLPLT
Trigger: GGTCAAGGGCAAGACCATCAAAGAAGTGGCAGAAGC...CTCCTGCCTCAGGGCCTCTGTCCTTATTCTTCCTCTTCCCAGGGGTGTGCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CAA 90 bp TTGAGGAGAGACCTGCAGGAAGTGAGCCAGCCAGCCATGAGGTTGTGTATGGACGCCTGGCCTTTGGACTaGTCTTCCCCCGTACACCAA +
Preference number: 5 (lower is better)
Translates to: LRRDLQEVSQPAMRLCMDAWPLD*SSPVHQ
Trigger: TTGGTGTACGGGGGAAGACAAGTCCAAAGGCCAGGC...GTCCATACACAACCTCATGGCTGGCTGGCTCACTTCCTGCAGGTCTCTCCTCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CAA 90 bp ACCAGCACACCCCTGGGAAGAGGAAGAATAAGGACAGAGGCCCTGAGGCAGGAGCTCCATTTAGGAAGCTaGAACACAGGGGTCCCATCT +
Preference number: 5 (lower is better)
Translates to: TSTPLGRGRIRTEALRQELHLGS*NTGVPS
Trigger: AGATGGGACCCCTGTGTTCAAGCTTCCTAAATGGAG...CTCCTGCCTCAGGGCCTCTGTCCTTATTCTTCCTCTTCCCAGGGGTGTGCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CAA 90 bp ACCAGCACACCCCTGGGAAGAGGAAGAATAAGGACAGAGGCCCTGAGGCAGGAGTTGATGGTCTTGCCCTaGACCCTCCATTTAGGAAGC +
Preference number: 5 (lower is better)
Translates to: TSTPLGRGRIRTEALRQELMVLP*TLHLGS
Trigger: GCTTCCTAAATGGAGGGTCAAGGGCAAGACCATCAA...CTCCTGCCTCAGGGCCTCTGTCCTTATTCTTCCTCTTCCCAGGGGTGTGCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CAA 90 bp TTGAGGAGAGACCTGCAGGAAGTGAGCCAGCCAGCCATGAGGTTGTGTATGGACCTGACGTCTCACCCGTaGAAAAGTACTGAGAGGCAG +
Preference number: 5 (lower is better)
Translates to: LRRDLQEVSQPAMRLCMDLTSHP*KSTERQ
Trigger: CTGCCTCTCAGTACTTTTCAACGGGTGAGACGTCAG...GTCCATACACAACCTCATGGCTGGCTGGCTCACTTCCTGCAGGTCTCTCCTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CAA 90 bp TTGAGGAGAGACCTGCAGGAAGTGAGCCAGCCAGCCATGAGGTTGTGTATGGACCCGAGTGGCTCTTTCTaGGTGAAGGTCAGATTGCGA +
Preference number: 5 (lower is better)
Translates to: LRRDLQEVSQPAMRLCMDPSGSF*VKVRLR
Trigger: TCGCAATCTGACCTTCACCAAGAAAGAGCCACTCGG...GTCCATACACAACCTCATGGCTGGCTGGCTCACTTCCTGCAGGTCTCTCCTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CAA 90 bp ACCAGCACACCCCTGGGAAGAGGAAGAATAAGGACAGAGGCCCTGAGGCAGGAGATGAGCCTTATGATTTaGGGGCCCATGATCAGTGGA +
Preference number: 5 (lower is better)
Translates to: TSTPLGRGRIRTEALRQEMSLMI*GPMISG
Trigger: TCCACTGATCATGGGCCCCAAAATCATAAGGCTCAT...CTCCTGCCTCAGGGCCTCTGTCCTTATTCTTCCTCTTCCCAGGGGTGTGCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CAA 90 bp TTGAGGAGAGACCTGCAGGAAGTGAGCCAGCCAGCCATGAGGTTGTGTATGGACGTGTATGGACAAGAGTaGCAGGAAGAGGCAGTGGTG +
Preference number: 5 (lower is better)
Translates to: LRRDLQEVSQPAMRLCMDVYGQE*QEEAVV
Trigger: CACCACTGCCTCTTCCTGCAACTCTTGTCCATACAC...GTCCATACACAACCTCATGGCTGGCTGGCTCACTTCCTGCAGGTCTCTCCTCAA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CAA 90 bp ACCAGCACACCCCTGGGAAGAGGAAGAATAAGGACAGAGGCCCTGAGGCAGGAGGACAGCTTTATTTTCTaGGAGGGCAGGTATGGGGAA +
Preference number: 5 (lower is better)
Translates to: TSTPLGRGRIRTEALRQEDSFIF*EGRYGE
Trigger: TTCCCCATACCTGCCCTCCAAGAAAATAAAGCTGTC...CTCCTGCCTCAGGGCCTCTGTCCTTATTCTTCCTCTTCCCAGGGGTGTGCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS TCA 90 bp TATGAGGCTGGGGAGCCGAAAGCAGTAGCTGAGAGGTGGAAAAGCTaGTCAGGTTTGGCAGGCTCTGCCAAGCTCTCCTGCAAAGCTATA +
Preference number: 5 (lower is better)
Translates to: YEAGEPKAVAERWKS*SGLAGSAKLSCKAI
Trigger: TATAGCTTTGCAGGAGAGCTTGGCAGAGCCTGCCAAACCTGATCAGCTTTTCCACCTCTCAGCTACTGCTTTCGGCTCCCCAGCCTCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550088.1
CDS-3UTR CAA 90 bp ACCAGCACACCCCTGGGAAGAGGAAGAATAAGGACAGAGGCCCTGAGGCAGGAGACTTCTTTGATGGTCTaGCCCTTGACCCTCCATTTA +
Preference number: 5 (lower is better)
Translates to: TSTPLGRGRIRTEALRQETSLMV*PLTLHL
Trigger: TAAATGGAGGGTCAAGGGCAAGACCATCAAAGAAGT...CTCCTGCCTCAGGGCCTCTGTCCTTATTCTTCCTCTTCCCAGGGGTGTGCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CAA 90 bp TTGAGGAGAGACCTGCAGGAAGTGAGCCAGCCAGCCATGAGGTTGTGTATGGACTTGAGCACTAAGGTATaGCCTGCTGCCAAACACGCA +
Preference number: 5 (lower is better)
Translates to: LRRDLQEVSQPAMRLCMDLSTKV*PAAKHA
Trigger: TGCGTGTTTGGCAGCAGGCAATACCTTAGTGCTCAA...GTCCATACACAACCTCATGGCTGGCTGGCTCACTTCCTGCAGGTCTCTCCTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CAA 90 bp ACCAGCACACCCCTGGGAAGAGGAAGAATAAGGACAGAGGCCCTGAGGCAGGAGATTATAAGTGGAGACTaGCCACCAAGCTCAAGGGAA +
Preference number: 5 (lower is better)
Translates to: TSTPLGRGRIRTEALRQEIISGD*PPSSRE
Trigger: TTCCCTTGAGCTTGGTGGCAAGTCTCCACTTATAAT...CTCCTGCCTCAGGGCCTCTGTCCTTATTCTTCCTCTTCCCAGGGGTGTGCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CAA 90 bp TTGAGGAGAGACCTGCAGGAAGTGAGCCAGCCAGCCATGAGGTTGTGTATGGACAGCAGGCTTGTTCTGTaGAGGAAGTCAAGGCAGTCA +
Preference number: 5 (lower is better)
Translates to: LRRDLQEVSQPAMRLCMDSRLVL*RKSRQS
Trigger: TGACTGCCTTGACTTCCTCAACAGAACAAGCCTGCT...GTCCATACACAACCTCATGGCTGGCTGGCTCACTTCCTGCAGGTCTCTCCTCAA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CAA 90 bp ACCAGCACACCCCTGGGAAGAGGAAGAATAAGGACAGAGGCCCTGAGGCAGGAGGCATCCACTGTATCATaGGGTTCAACATCACATGAT +
Preference number: 5 (lower is better)
Translates to: TSTPLGRGRIRTEALRQEASTVS*GSTSHD
Trigger: ATCATGTGATGTTGAACCCAATGATACAGTGGATGC...CTCCTGCCTCAGGGCCTCTGTCCTTATTCTTCCTCTTCCCAGGGGTGTGCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CAA 90 bp TTGAGGAGAGACCTGCAGGAAGTGAGCCAGCCAGCCATGAGGTTGTGTATGGACACGAGACCAGGCTTCTaGGCACCTTTAATTTCCAGT +
Preference number: 5 (lower is better)
Translates to: LRRDLQEVSQPAMRLCMDTRPGF*APLISS
Trigger: ACTGGAAATTAAAGGTGCCAAGAAGCCTGGTCTCGT...GTCCATACACAACCTCATGGCTGGCTGGCTCACTTCCTGCAGGTCTCTCCTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CAA 90 bp CCTCCTGCCTCAACACACCCAATCTTCTTAAGTGTGTCCAGAGTTGTAAAGGGCCCAGCCCAGATGACCTaGATGGTCTCTGCCACTTTC +
Preference number: 5 (lower is better)
Translates to: PPASTHPIFLSVSRVVKGPAQMT*MVSATF
Trigger: GAAAGTGGCAGAGACCATCAAGGTCATCTGGGCTGG...GCCCTTTACAACTCTGGACACACTTAAGAAGATTGGGTGTGTTGAGGCAGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CAA 90 bp TTGAGGAGAGACCTGCAGGAAGTGAGCCAGCCAGCCATGAGGTTGTGTATGGACCCAGTGAAACCAAGTTaGCGGATGTCAGGATGTTCA +
Preference number: 5 (lower is better)
Translates to: LRRDLQEVSQPAMRLCMDPVKPS*RMSGCS
Trigger: TGAACATCCTGACATCCGCAAACTTGGTTTCACTGG...GTCCATACACAACCTCATGGCTGGCTGGCTCACTTCCTGCAGGTCTCTCCTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CAA 90 bp TTGAGGAGAGACCTGCAGGAAGTGAGCCAGCCAGCCATGAGGTTGTGTATGGACCCCATTCGCACAGCCTaGTCAAGTTCACAGTCATTA +
Preference number: 5 (lower is better)
Translates to: LRRDLQEVSQPAMRLCMDPIRTA*SSSQSL
Trigger: TAATGACTGTGAACTTGACAAGGCTGTGCGAATGGG...GTCCATACACAACCTCATGGCTGGCTGGCTCACTTCCTGCAGGTCTCTCCTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CAA 90 bp ACCAGCACACCCCTGGGAAGAGGAAGAATAAGGACAGAGGCCCTGAGGCAGGAGCTTTCTGGCTATCTTTaGGAGACTCATGTGATTCAG +
Preference number: 5 (lower is better)
Translates to: TSTPLGRGRIRTEALRQELSGYL*ETHVIQ
Trigger: CTGAATCACATGAGTCTCCAAAAGATAGCCAGAAAG...CTCCTGCCTCAGGGCCTCTGTCCTTATTCTTCCTCTTCCCAGGGGTGTGCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CAA 90 bp ACCTTGATGGTCTCTGCCACTTTCACCTCTTCAGCTGTCAGTTCTACCACTGACGTGGCTATAGACTTCTaGTCCAAAGAGGCTCTGGCC +
Preference number: 5 (lower is better)
Translates to: TLMVSATFTSSAVSSTTDVAIDF*SKEALA
Trigger: GGCCAGAGCCTCTTTGGACAAGAAGTCTATAGCCAC...GTCAGTGGTAGAACTGACAGCTGAAGAGGTGAAAGTGGCAGAGACCATCAAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR CAA 90 bp TGTCCTGCTATGCCACCTGAGCCTGGAATGATGTTGATGACCCCCTTTGGAAAGTTGATGGTCTTGCCCTaGACCCTCCATTTAGGAAGC +
Preference number: 5 (lower is better)
Translates to: CPAMPPEPGMMLMTPFGKLMVLP*TLHLGS
Trigger: GCTTCCTAAATGGAGGGTCAAGGGCAAGACCATCAA...CTTTCCAAAGGGGGTCATCAACATCATTCCAGGCTCAGGTGGCATAGCAGGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR CAA 90 bp CCTCCTGCCTCAACACACCCAATCTTCTTAAGTGTGTCCAGAGTTGTAAAGGGCGGATACCTTCATATGTaGCCCCTTCTTCTGGCTGGG +
Preference number: 5 (lower is better)
Translates to: PPASTHPIFLSVSRVVKGGYLHM*PLLLAG
Trigger: CCCAGCCAGAAGAAGGGGCAACATATGAAGGTATCC...GCCCTTTACAACTCTGGACACACTTAAGAAGATTGGGTGTGTTGAGGCAGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CAA 90 bp ACTTGTCTTCCCCCGTACACCAAAGTGGCCCCTTCTTTCACTCCAGTTTCACAGTTGAGCACTAAGGTATaGCCTGCTGCCAAACACGCA +
Preference number: 5 (lower is better)
Translates to: TCLPPYTKVAPSFTPVSQLSTKV*PAAKHA
Trigger: TGCGTGTTTGGCAGCAGGCAATACCTTAGTGCTCAA...CTGTGAAACTGGAGTGAAAGAAGGGGCCACTTTGGTGTACGGGGGAAGACAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR CAA 90 bp TTGAGGAGAGACCTGCAGGAAGTGAGCCAGCCAGCCATGAGGTTGTGTATGGACATTATAAGTGGAGACTaGCCACCAAGCTCAAGGGAA +
Preference number: 5 (lower is better)
Translates to: LRRDLQEVSQPAMRLCMDIISGD*PPSSRE
Trigger: TTCCCTTGAGCTTGGTGGCAAGTCTCCACTTATAAT...GTCCATACACAACCTCATGGCTGGCTGGCTCACTTCCTGCAGGTCTCTCCTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CAA 90 bp ACCTTGATGGTCTCTGCCACTTTCACCTCTTCAGCTGTCAGTTCTACCACTGACGAAAAAGCCTGGCCTTaGGACTTGTCTTCCCCCGTA +
Preference number: 5 (lower is better)
Translates to: TLMVSATFTSSAVSSTTDEKAWP*DLSSPV
Trigger: TACGGGGGAAGACAAGTCCAAAGGCCAGGCTTTTTC...GTCAGTGGTAGAACTGACAGCTGAAGAGGTGAAAGTGGCAGAGACCATCAAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR CAA 90 bp CCTCCTGCCTCAACACACCCAATCTTCTTAAGTGTGTCCAGAGTTGTAAAGGGCGAAAAAGCCTGGCCTTaGGACTTGTCTTCCCCCGTA +
Preference number: 5 (lower is better)
Translates to: PPASTHPIFLSVSRVVKGEKAWP*DLSSPV
Trigger: TACGGGGGAAGACAAGTCCAAAGGCCAGGCTTTTTC...GCCCTTTACAACTCTGGACACACTTAAGAAGATTGGGTGTGTTGAGGCAGGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CAA 90 bp TTGAGGAGAGACCTGCAGGAAGTGAGCCAGCCAGCCATGAGGTTGTGTATGGACCATACTCTGTACTATTaGCTCGCTGCAACACTCCAT +
Preference number: 5 (lower is better)
Translates to: LRRDLQEVSQPAMRLCMDHTLYY*LAATLH
Trigger: ATGGAGTGTTGCAGCGAGCAAATAGTACAGAGTATG...GTCCATACACAACCTCATGGCTGGCTGGCTCACTTCCTGCAGGTCTCTCCTCAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CAA 90 bp ACCAGCACACCCCTGGGAAGAGGAAGAATAAGGACAGAGGCCCTGAGGCAGGAGGATTCCCAAAGAGTTTaGCAGCCCAGAGAATATTTA +
Preference number: 5 (lower is better)
Translates to: TSTPLGRGRIRTEALRQEDSQRV*QPREYL
Trigger: TAAATATTCTCTGGGCTGCAAAACTCTTTGGGAATC...CTCCTGCCTCAGGGCCTCTGTCCTTATTCTTCCTCTTCCCAGGGGTGTGCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CAA 90 bp ACCAGCACACCCCTGGGAAGAGGAAGAATAAGGACAGAGGCCCTGAGGCAGGAGCATATCGTATTATTATaGACAGAAGGCCCATACTGG +
Preference number: 5 (lower is better)
Translates to: TSTPLGRGRIRTEALRQEHIVLL*TEGPYW
Trigger: CCAGTATGGGCCTTCTGTCAATAATAATACGATATG...CTCCTGCCTCAGGGCCTCTGTCCTTATTCTTCCTCTTCCCAGGGGTGTGCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CAA 90 bp AGACCAGTTGGGAGACTTGAGCAAAATTGTAGGAAAGAGGTAACAGGCCAGGTGGTGGCTATAGACTTCTaGTCCAAAGAGGCTCTGGCC +
Preference number: 5 (lower is better)
Translates to: RPVGRLEQNCRKEVTGQVVAIDF*SKEALA
Trigger: GGCCAGAGCCTCTTTGGACAAGAAGTCTATAGCCAC...CACCTGGCCTGTTACCTCTTTCCTACAATTTTGCTCAAGTCTCCCAACTGGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CAA 90 bp CCTCCTGCCTCAACACACCCAATCTTCTTAAGTGTGTCCAGAGTTGTAAAGGGCCTCCATTTAGGAAGCTaGAACACAGGGGTCCCATCT +
Preference number: 5 (lower is better)
Translates to: PPASTHPIFLSVSRVVKGLHLGS*NTGVPS
Trigger: AGATGGGACCCCTGTGTTCAAGCTTCCTAAATGGAG...GCCCTTTACAACTCTGGACACACTTAAGAAGATTGGGTGTGTTGAGGCAGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CAA 90 bp TTGAGGAGAGACCTGCAGGAAGTGAGCCAGCCAGCCATGAGGTTGTGTATGGACATAATTAGAGTCCAATaGATAGCAGAGGCTCCTCTG +
Preference number: 5 (lower is better)
Translates to: LRRDLQEVSQPAMRLCMDIIRVQ*IAEAPL
Trigger: CAGAGGAGCCTCTGCTATCAATTGGACTCTAATTAT...GTCCATACACAACCTCATGGCTGGCTGGCTCACTTCCTGCAGGTCTCTCCTCAA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CAA 90 bp ACTTGCAGAATTGTGTGTGTGCACATGAATTTTGGGGGTAGAAGCGGGACACAGCTGACGTCTCACCCGTaGAAAAGTACTGAGAGGCAG +
Preference number: 5 (lower is better)
Translates to: TCRIVCVHMNFGGRSGTQLTSHP*KSTERQ
Trigger: CTGCCTCTCAGTACTTTTCAACGGGTGAGACGTCAG...CTGTGTCCCGCTTCTACCCCCAAAATTCATGTGCACACACACAATTCTGCAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CAA 90 bp TGTTTGCCAATAGGAGTGGATCCAGTGAAACCAAGTTTGCGGATGTCAGGATGTTTGGTGAAGGTCAGATaGCGATTTGGACGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: CLPIGVDPVKPSLRMSGCLVKVR*RFGRAW
Trigger: CCAGGCCCGTCCAAATCGCAATCTGACCTTCACCAA...ACATCCTGACATCCGCAAACTTGGTTTCACTGGATCCACTCCTATTGGCAAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR CAA 90 bp ACTTGCAGAATTGTGTGTGTGCACATGAATTTTGGGGGTAGAAGCGGGACACAGCCGAGTGGCTCTTTCTaGGTGAAGGTCAGATTGCGA +
Preference number: 5 (lower is better)
Translates to: TCRIVCVHMNFGGRSGTQPSGSF*VKVRLR
Trigger: TCGCAATCTGACCTTCACCAAGAAAGAGCCACTCGG...CTGTGTCCCGCTTCTACCCCCAAAATTCATGTGCACACACACAATTCTGCAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CAA 90 bp TGTCCTGCTATGCCACCTGAGCCTGGAATGATGTTGATGACCCCCTTTGGAAAGCCAGTGAAACCAAGTTaGCGGATGTCAGGATGTTCA +
Preference number: 5 (lower is better)
Translates to: CPAMPPEPGMMLMTPFGKPVKPS*RMSGCS
Trigger: TGAACATCCTGACATCCGCAAACTTGGTTTCACTGG...CTTTCCAAAGGGGGTCATCAACATCATTCCAGGCTCAGGTGGCATAGCAGGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR CAA 90 bp TGGCTTGCATTTGTTCTGATGGCATGCATCTCTTCCCAAACTCTGTATTCAGTGGCCTGGCCTTTGGACTaGTCTTCCCCCGTACACCAA +
Preference number: 5 (lower is better)
Translates to: WLAFVLMACISSQTLYSVAWPLD*SSPVHQ
Trigger: TTGGTGTACGGGGGAAGACAAGTCCAAAGGCCAGGC...CACTGAATACAGAGTTTGGGAAGAGATGCATGCCATCAGAACAAATGCAAGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CAA 90 bp ACCAGCACACCCCTGGGAAGAGGAAGAATAAGGACAGAGGCCCTGAGGCAGGAGTCCAATAAATGCACCTaGTGTATTATAACTGCATGG +
Preference number: 5 (lower is better)
Translates to: TSTPLGRGRIRTEALRQESNKCT*CIITAW
Trigger: CCATGCAGTTATAATACACAAGGTGCATTTATTGGA...CTCCTGCCTCAGGGCCTCTGTCCTTATTCTTCCTCTTCCCAGGGGTGTGCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CAA 90 bp CCTCCTGCCTCAACACACCCAATCTTCTTAAGTGTGTCCAGAGTTGTAAAGGGCAGAGGCTCAGAGGAGTaGCGAGAGTTTCCCAAAGTT +
Preference number: 5 (lower is better)
Translates to: PPASTHPIFLSVSRVVKGRGSEE*REFPKV
Trigger: AACTTTGGGAAACTCTCGCAACTCCTCTGAGCCTCT...GCCCTTTACAACTCTGGACACACTTAAGAAGATTGGGTGTGTTGAGGCAGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CAA 90 bp ACCAGCACACCCCTGGGAAGAGGAAGAATAAGGACAGAGGCCCTGAGGCAGGAGCTTTTCCTTGTACTATaGCCATTTTTCATTGTGTGG +
Preference number: 5 (lower is better)
Translates to: TSTPLGRGRIRTEALRQELFLVL*PFFIVW
Trigger: CCACACAATGAAAAATGGCAATAGTACAAGGAAAAG...CTCCTGCCTCAGGGCCTCTGTCCTTATTCTTCCTCTTCCCAGGGGTGTGCTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CAA 90 bp TTGAGGAGAGACCTGCAGGAAGTGAGCCAGCCAGCCATGAGGTTGTGTATGGACAGGTCTGTGAACCCTTaGAAGATACTTGCAGAATTG +
Preference number: 5 (lower is better)
Translates to: LRRDLQEVSQPAMRLCMDRSVNP*KILAEL
Trigger: CAATTCTGCAAGTATCTTCAAAGGGTTCACAGACCT...GTCCATACACAACCTCATGGCTGGCTGGCTCACTTCCTGCAGGTCTCTCCTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CAA 90 bp AGACCAGTTGGGAGACTTGAGCAAAATTGTAGGAAAGAGGTAACAGGCCAGGTGCAGCCAGCCATGAGGTaGTGTATGGACAAGAGTTGC +
Preference number: 5 (lower is better)
Translates to: RPVGRLEQNCRKEVTGQVQPAMR*CMDKSC
Trigger: GCAACTCTTGTCCATACACAACCTCATGGCTGGCTG...CACCTGGCCTGTTACCTCTTTCCTACAATTTTGCTCAAGTCTCCCAACTGGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CAA 90 bp TTGAGGAGAGACCTGCAGGAAGTGAGCCAGCCAGCCATGAGGTTGTGTATGGACTATGGGGAACCAAATTaGTTTCCTTACCCTAGCTCT +
Preference number: 5 (lower is better)
Translates to: LRRDLQEVSQPAMRLCMDYGEPN*FPYPSS
Trigger: AGAGCTAGGGTAAGGAAACAAATTTGGTTCCCCATA...GTCCATACACAACCTCATGGCTGGCTGGCTCACTTCCTGCAGGTCTCTCCTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CAA 90 bp AGACCAGTTGGGAGACTTGAGCAAAATTGTAGGAAAGAGGTAACAGGCCAGGTGGAGTGCCGAAGTGGCTaGAGAAGCACAGTGAATGGT +
Preference number: 5 (lower is better)
Translates to: RPVGRLEQNCRKEVTGQVECRSG*RSTVNG
Trigger: ACCATTCACTGTGCTTCTCAAGCCACTTCGGCACTC...CACCTGGCCTGTTACCTCTTTCCTACAATTTTGCTCAAGTCTCCCAACTGGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652515.1
CDS TCA 90 bp GTTGAGCTTGACATTTGGCACCACATTTCACCTCAAGACATCTGCTaGTTTGTAATGTGGCAGCTGAGAGTTTATGAGGCTGGGGAGCCG +
Preference number: 5 (lower is better)
Translates to: VELDIWHHISPQDIC*FVMWQLRVYEAGEP
Trigger: CGGCTCCCCAGCCTCATAAACTCTCAGCTGCCACATTACAAATCAGCAGATGTCTTGAGGTGAAATGTGGTGCCAAATGTCAAGCTCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550088.1
CDS-3UTR CAA 90 bp CCTGCTATGCCACCTGAGCCTGGAATGATGTTGATGACCCCCTTTGGAAAGCCTATAATTAGAGTCCAATaGATAGCAGAGGCTCCTCTG +
Preference number: 5 (lower is better)
Translates to: PAMPPEPGMMLMTPFGKPIIRVQ*IAEAPL
Trigger: CAGAGGAGCCTCTGCTATCAATTGGACTCTAATTAT...AGGCTTTCCAAAGGGGGTCATCAACATCATTCCAGGCTCAGGTGGCATAGCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR CAA 90 bp AGACCAGTTGGGAGACTTGAGCAAAATTGTAGGAAAGAGGTAACAGGCCAGGTGTTTGGACGGGCCTGGTaGATTGGAATAGTAGAACCC +
Preference number: 5 (lower is better)
Translates to: RPVGRLEQNCRKEVTGQVFGRAW*IGIVEP
Trigger: GGGTTCTACTATTCCAATCAACCAGGCCCGTCCAAA...CACCTGGCCTGTTACCTCTTTCCTACAATTTTGCTCAAGTCTCCCAACTGGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CAA 90 bp TGGCTTGCATTTGTTCTGATGGCATGCATCTCTTCCCAAACTCTGTATTCAGTGTTGGTGAAGGTCAGATaGCGATTTGGACGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: WLAFVLMACISSQTLYSVLVKVR*RFGRAW
Trigger: CCAGGCCCGTCCAAATCGCAATCTGACCTTCACCAA...CACTGAATACAGAGTTTGGGAAGAGATGCATGCCATCAGAACAAATGCAAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CAA 90 bp ACTTGCAGAATTGTGTGTGTGCACATGAATTTTGGGGGTAGAAGCGGGACACAGGAGCCTGGAATGATGTaGATGACCCCCTTTGGAAAG +
Preference number: 5 (lower is better)
Translates to: TCRIVCVHMNFGGRSGTQEPGMM*MTPFGK
Trigger: CTTTCCAAAGGGGGTCATCAACATCATTCCAGGCTC...CTGTGTCCCGCTTCTACCCCCAAAATTCATGTGCACACACACAATTCTGCAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CAA 90 bp GAGACCAGGCTTCTTGGCACCTTTAATTTCCAGTGGTTCTCCAGGAGGCACAGACTCTTCATGATCTGTTaGCCAATAGGAGTGGATCCA +
Preference number: 5 (lower is better)
Translates to: ETRLLGTFNFQWFSRRHRLFMIC*PIGVDP
Trigger: TGGATCCACTCCTATTGGCAAACAGATCATGAAGAG...TCTGTGCCTCCTGGAGAACCACTGGAAATTAAAGGTGCCAAGAAGCCTGGTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR CAA 90 bp ACTTGTCTTCCCCCGTACACCAAAGTGGCCCCTTCTTTCACTCCAGTTTCACAGATTATAAGTGGAGACTaGCCACCAAGCTCAAGGGAA +
Preference number: 5 (lower is better)
Translates to: TCLPPYTKVAPSFTPVSQIISGD*PPSSRE
Trigger: TTCCCTTGAGCTTGGTGGCAAGTCTCCACTTATAAT...CTGTGAAACTGGAGTGAAAGAAGGGGCCACTTTGGTGTACGGGGGAAGACAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR CAA 90 bp ACCTTGATGGTCTCTGCCACTTTCACCTCTTCAGCTGTCAGTTCTACCACTGACATGAGCCTTATGATTTaGGGGCCCATGATCAGTGGA +
Preference number: 5 (lower is better)
Translates to: TLMVSATFTSSAVSSTTDMSLMI*GPMISG
Trigger: TCCACTGATCATGGGCCCCAAAATCATAAGGCTCAT...GTCAGTGGTAGAACTGACAGCTGAAGAGGTGAAAGTGGCAGAGACCATCAAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR CAA 90 bp CTGACGTCTCACCCGTTGAAAAGTACTGAGAGGCAGGGATCATTTTTCCATCTTCTCCATTTAGGAAGCTaGAACACAGGGGTCCCATCT +
Preference number: 5 (lower is better)
Translates to: LTSHPLKSTERQGSFFHLLHLGS*NTGVPS
Trigger: AGATGGGACCCCTGTGTTCAAGCTTCCTAAATGGAG...AAGATGGAAAAATGATCCCTGCCTCTCAGTACTTTTCAACGGGTGAGACGTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR CAA 90 bp TTTAAACAGACGAGTGAAGTGACACTGTCTGACTTAAGCTTTGAACAGGACCGCGCTTCTGCCACTTCTTaGATGGTCTTGCCCTTGACC +
Preference number: 5 (lower is better)
Translates to: FKQTSEVTLSDLSFEQDRASATS*MVLPLT
Trigger: GGTCAAGGGCAAGACCATCAAAGAAGTGGCAGAAGC...GCGGTCCTGTTCAAAGCTTAAGTCAGACAGTGTCACTTCACTCGTCTGTTTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CAA 90 bp TTTAAACAGACGAGTGAAGTGACACTGTCTGACTTAAGCTTTGAACAGGACCGCGGATACCTTCATATGTaGCCCCTTCTTCTGGCTGGG +
Preference number: 5 (lower is better)
Translates to: FKQTSEVTLSDLSFEQDRGYLHM*PLLLAG
Trigger: CCCAGCCAGAAGAAGGGGCAACATATGAAGGTATCC...GCGGTCCTGTTCAAAGCTTAAGTCAGACAGTGTCACTTCACTCGTCTGTTTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CAA 90 bp CCTCCTGCCTCAACACACCCAATCTTCTTAAGTGTGTCCAGAGTTGTAAAGGGCAGAACAAGTCCATTTTaGGTAACGAGACCAGGCTTC +
Preference number: 5 (lower is better)
Translates to: PPASTHPIFLSVSRVVKGRTSPF*VTRPGF
Trigger: GAAGCCTGGTCTCGTTACCAAAAATGGACTTGTTCT...GCCCTTTACAACTCTGGACACACTTAAGAAGATTGGGTGTGTTGAGGCAGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CAA 90 bp AAAAATACTGCTCCCATGCCCATTCGCACAGCCTTGTCAAGTTCACAGTCATTACTGACGTCTCACCCGTaGAAAAGTACTGAGAGGCAG +
Preference number: 5 (lower is better)
Translates to: KNTAPMPIRTALSSSQSLLTSHP*KSTERQ
Trigger: CTGCCTCTCAGTACTTTTCAACGGGTGAGACGTCAG...TAATGACTGTGAACTTGACAAGGCTGTGCGAATGGGCATGGGAGCAGTATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR CAA 90 bp TGTTTGCCAATAGGAGTGGATCCAGTGAAACCAAGTTTGCGGATGTCAGGATGTGAGCCTGGAATGATGTaGATGACCCCCTTTGGAAAG +
Preference number: 5 (lower is better)
Translates to: CLPIGVDPVKPSLRMSGCEPGMM*MTPFGK
Trigger: CTTTCCAAAGGGGGTCATCAACATCATTCCAGGCTC...ACATCCTGACATCCGCAAACTTGGTTTCACTGGATCCACTCCTATTGGCAAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR CAA 90 bp AGACCAGTTGGGAGACTTGAGCAAAATTGTAGGAAAGAGGTAACAGGCCAGGTGCCAGTGAAACCAAGTTaGCGGATGTCAGGATGTTCA +
Preference number: 5 (lower is better)
Translates to: RPVGRLEQNCRKEVTGQVPVKPS*RMSGCS
Trigger: TGAACATCCTGACATCCGCAAACTTGGTTTCACTGG...CACCTGGCCTGTTACCTCTTTCCTACAATTTTGCTCAAGTCTCCCAACTGGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CAA 90 bp CCACCACATTTCTGTCTGATCTCTTCAACCAGCCTGGCAACATCCATTGAGCTTCCCATTCGCACAGCCTaGTCAAGTTCACAGTCATTA +
Preference number: 5 (lower is better)
Translates to: PPHFCLISSTSLATSIELPIRTA*SSSQSL
Trigger: TAATGACTGTGAACTTGACAAGGCTGTGCGAATGGG...AAGCTCAATGGATGTTGCCAGGCTGGTTGAAGAGATCAGACAGAAATGTGGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR CAA 90 bp ACTTGCAGAATTGTGTGTGTGCACATGAATTTTGGGGGTAGAAGCGGGACACAGATGAGCCTTATGATTTaGGGGCCCATGATCAGTGGA +
Preference number: 5 (lower is better)
Translates to: TCRIVCVHMNFGGRSGTQMSLMI*GPMISG
Trigger: TCCACTGATCATGGGCCCCAAAATCATAAGGCTCAT...CTGTGTCCCGCTTCTACCCCCAAAATTCATGTGCACACACACAATTCTGCAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CAA 90 bp ATCAACATCCGCCAAAGAAGCGTAGGATACTTTGCATATTGTAGATCCATCTGTGCCTGGCCTTTGGACTaGTCTTCCCCCGTACACCAA +
Preference number: 5 (lower is better)
Translates to: INIRQRSVGYFAYCRSICAWPLD*SSPVHQ
Trigger: TTGGTGTACGGGGGAAGACAAGTCCAAAGGCCAGGC...ACAGATGGATCTACAATATGCAAAGTATCCTACGCTTCTTTGGCGGATGTTGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR CAA 90 bp GAGACCAGGCTTCTTGGCACCTTTAATTTCCAGTGGTTCTCCAGGAGGCACAGATTTTCCAAAGCCAGATaGTTTAACTCCGCCAAATGG +
Preference number: 5 (lower is better)
Translates to: ETRLLGTFNFQWFSRRHRFSKAR*FNSAKW
Trigger: CCATTTGGCGGAGTTAAACAATCTGGCTTTGGAAAA...TCTGTGCCTCCTGGAGAACCACTGGAAATTAAAGGTGCCAAGAAGCCTGGTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR CAA 90 bp TTTAAACAGACGAGTGAAGTGACACTGTCTGACTTAAGCTTTGAACAGGACCGCCAGCCAGCCATGAGGTaGTGTATGGACAAGAGTTGC +
Preference number: 5 (lower is better)
Translates to: FKQTSEVTLSDLSFEQDRQPAMR*CMDKSC
Trigger: GCAACTCTTGTCCATACACAACCTCATGGCTGGCTG...GCGGTCCTGTTCAAAGCTTAAGTCAGACAGTGTCACTTCACTCGTCTGTTTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CAA 90 bp ACTTGCAGAATTGTGTGTGTGCACATGAATTTTGGGGGTAGAAGCGGGACACAGGACAGCTTTATTTTCTaGGAGGGCAGGTATGGGGAA +
Preference number: 5 (lower is better)
Translates to: TCRIVCVHMNFGGRSGTQDSFIF*EGRYGE
Trigger: TTCCCCATACCTGCCCTCCAAGAAAATAAAGCTGTC...CTGTGTCCCGCTTCTACCCCCAAAATTCATGTGCACACACACAATTCTGCAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS TCA 90 bp ATAGAGCCGTGCTTTGGACTATCAATTATATCCATGGGAATGAACTaGGTGCAGAAAGGGAGCACATTTAGCTCTGCACCCACGGATCTG +
Preference number: 5 (lower is better)
Translates to: IEPCFGLSIISMGMN*VQKGSTFSSAPTDL
Trigger: CAGATCCGTGGGTGCAGAGCTAAATGTGCTCCCTTTCTGCACTCAGTTCATTCCCATGGATATAATTGATAGTCCAAAGCACGGCTCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258494.14
ENST00000552270.1
ENST00000552427.1
ENST00000652515.1
CDS CCA 90 bp GTGCCTGGGCAGGATGGATGGGTGATAAATGATAGAGCCGTGCTTTaGACTATCAATTATATCCATGGGAATGAACTGAGTGCAGAAAGG +
Preference number: 5 (lower is better)
Translates to: VPGQDGWVINDRAVL*TINYIHGNELSAER
Trigger: CCTTTCTGCACTCAGTTCATTCCCATGGATATAATTGATAGTCCAAAGCACGGCTCTATCATTTATCACCCATCCATCCTGCCCAGGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258494.14
ENST00000552270.1
ENST00000552427.1
ENST00000652515.1
CDS-3UTR CAA 90 bp ACTTGCAGAATTGTGTGTGTGCACATGAATTTTGGGGGTAGAAGCGGGACACAGACTTCTTTGATGGTCTaGCCCTTGACCCTCCATTTA +
Preference number: 5 (lower is better)
Translates to: TCRIVCVHMNFGGRSGTQTSLMV*PLTLHL
Trigger: TAAATGGAGGGTCAAGGGCAAGACCATCAAAGAAGT...CTGTGTCCCGCTTCTACCCCCAAAATTCATGTGCACACACACAATTCTGCAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CAA 90 bp TCAATAATGGGGACATTGCTTAAAATTCCAGCCCAGATGACCTTGATGGTCTCTGCTTCTGCCACTTCTTaGATGGTCTTGCCCTTGACC +
Preference number: 5 (lower is better)
Translates to: SIMGTLLKIPAQMTLMVSASATS*MVLPLT
Trigger: GGTCAAGGGCAAGACCATCAAAGAAGTGGCAGAAGC...AGAGACCATCAAGGTCATCTGGGCTGGAATTTTAAGCAATGTCCCCATTATTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR CAA 90 bp CTGACGTCTCACCCGTTGAAAAGTACTGAGAGGCAGGGATCATTTTTCCATCTTACGAGACCAGGCTTCTaGGCACCTTTAATTTCCAGT +
Preference number: 5 (lower is better)
Translates to: LTSHPLKSTERQGSFFHLTRPGF*APLISS
Trigger: ACTGGAAATTAAAGGTGCCAAGAAGCCTGGTCTCGT...AAGATGGAAAAATGATCCCTGCCTCTCAGTACTTTTCAACGGGTGAGACGTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR CAA 90 bp TGGCTTGCATTTGTTCTGATGGCATGCATCTCTTCCCAAACTCTGTATTCAGTGTTTGGACGGGCCTGGTaGATTGGAATAGTAGAACCC +
Preference number: 5 (lower is better)
Translates to: WLAFVLMACISSQTLYSVFGRAW*IGIVEP
Trigger: GGGTTCTACTATTCCAATCAACCAGGCCCGTCCAAA...CACTGAATACAGAGTTTGGGAAGAGATGCATGCCATCAGAACAAATGCAAGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CAA 90 bp CCTCCTGCCTCAACACACCCAATCTTCTTAAGTGTGTCCAGAGTTGTAAAGGGCGAAACTTTCTTCAAGTaGCTAACAGCACAGCTCTTC +
Preference number: 5 (lower is better)
Translates to: PPASTHPIFLSVSRVVKGETFFK*LTAQLF
Trigger: GAAGAGCTGTGCTGTTAGCAACTTGAAGAAAGTTTC...GCCCTTTACAACTCTGGACACACTTAAGAAGATTGGGTGTGTTGAGGCAGGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CAA 90 bp CCACCACATTTCTGTCTGATCTCTTCAACCAGCCTGGCAACATCCATTGAGCTTCATACTCTGTACTATTaGCTCGCTGCAACACTCCAT +
Preference number: 5 (lower is better)
Translates to: PPHFCLISSTSLATSIELHTLYY*LAATLH
Trigger: ATGGAGTGTTGCAGCGAGCAAATAGTACAGAGTATG...AAGCTCAATGGATGTTGCCAGGCTGGTTGAAGAGATCAGACAGAAATGTGGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR CAA 90 bp AGACCAGTTGGGAGACTTGAGCAAAATTGTAGGAAAGAGGTAACAGGCCAGGTGGATAATGTTTCTAGGTaGATCACCCATCACAGTGGG +
Preference number: 5 (lower is better)
Translates to: RPVGRLEQNCRKEVTGQVDNVSR*ITHHSG
Trigger: CCCACTGTGATGGGTGATCAACCTAGAAACATTATC...CACCTGGCCTGTTACCTCTTTCCTACAATTTTGCTCAAGTCTCCCAACTGGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CAA 90 bp TGCTTAAAGTGTCCACACCTCCCGATTCAGGTGATAATAAGATCACAGCTTCATAGGCCCATACTGGAGTaGGGGAGGGTTGTTCATATC +
Preference number: 5 (lower is better)
Translates to: CLKCPHLPIQVIIRSQLHRPILE*GRVVHI
Trigger: GATATGAACAACCCTCCCCAACTCCAGTATGGGCCT...ATGAAGCTGTGATCTTATTATCACCTGAATCGGGAGGTGTGGACACTTTAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CAA 90 bp ACTTGCAGAATTGTGTGTGTGCACATGAATTTTGGGGGTAGAAGCGGGACACAGGACCAGTTGGGAGACTaGAGCAAAATTGTAGGAAAG +
Preference number: 5 (lower is better)
Translates to: TCRIVCVHMNFGGRSGTQDQLGD*SKIVGK
Trigger: CTTTCCTACAATTTTGCTCAAGTCTCCCAACTGGTC...CTGTGTCCCGCTTCTACCCCCAAAATTCATGTGCACACACACAATTCTGCAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CAA 90 bp AAAAATACTGCTCCCATGCCCATTCGCACAGCCTTGTCAAGTTCACAGTCATTATCCATCAGCTATGAGTaGGACAGCTTCATGGCCTTG +
Preference number: 5 (lower is better)
Translates to: KNTAPMPIRTALSSSQSLSISYE*DSFMAL
Trigger: CAAGGCCATGAAGCTGTCCAACTCATAGCTGATGGA...TAATGACTGTGAACTTGACAAGGCTGTGCGAATGGGCATGGGAGCAGTATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR CAA 90 bp GATCTGTTTGCCAATAGGAGTGGATCCAGTGAAACCAAGTTTGCGGATGTCAGGATCAGTGGATCACTCTaGTCACAAATTCGTCGTGGA +
Preference number: 5 (lower is better)
Translates to: DLFANRSGSSETKFADVRISGSL*SQIRRG
Trigger: TCCACGACGAATTTGTGACAAGAGTGATCCACTGAT...CCTGACATCCGCAAACTTGGTTTCACTGGATCCACTCCTATTGGCAAACAGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS CCA 90 bp CCACTGTATCATTGGGTTCAACATCACATGATCTCTGAAGAAGGATaGGTCCTGTATCCAAGCCATCATCAGCCCAGAAAACAGAAAACC +
Preference number: 5 (lower is better)
Translates to: PLYHWVQHHMISEEG*VLYPSHHQPRKQKT
Trigger: GGTTTTCTGTTTTCTGGGCTGATGATGGCTTGGATACAGGACCCATCCTTCTTCAGAGATCATGTGATGTTGAACCCAATGATACAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258494.14
ENST00000552270.1
ENST00000652515.1
CDS-3UTR CAA 90 bp TGCTACTGCTTTATCAACATCCGCCAAAGAAGCGTAGGATACTTTGCATATTGTGGATACCTTCATATGTaGCCCCTTCTTCTGGCTGGG +
Preference number: 5 (lower is better)
Translates to: CYCFINIRQRSVGYFAYCGYLHM*PLLLAG
Trigger: CCCAGCCAGAAGAAGGGGCAACATATGAAGGTATCC...ACAATATGCAAAGTATCCTACGCTTCTTTGGCGGATGTTGATAAAGCAGTAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR CAA 90 bp ACATACATAGCTTTGTTTATGTCTCTTGTAAAAACCCCTGAGGCCAAACCATACCCAGCCCAGATGACCTaGATGGTCTCTGCCACTTTC +
Preference number: 5 (lower is better)
Translates to: TYIALFMSLVKTPEAKPYPAQMT*MVSATF
Trigger: GAAAGTGGCAGAGACCATCAAGGTCATCTGGGCTGG...GTATGGTTTGGCCTCAGGGGTTTTTACAAGAGACATAAACAAAGCTATGTATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR CAA 90 bp TCAATAATGGGGACATTGCTTAAAATTCCAGCCCAGATGACCTTGATGGTCTCTTTTGGACGGGCCTGGTaGATTGGAATAGTAGAACCC +
Preference number: 5 (lower is better)
Translates to: SIMGTLLKIPAQMTLMVSFGRAW*IGIVEP
Trigger: GGGTTCTACTATTCCAATCAACCAGGCCCGTCCAAA...AGAGACCATCAAGGTCATCTGGGCTGGAATTTTAAGCAATGTCCCCATTATTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR CAA 90 bp ATTCTGCCAAGTCTCCAAAATGACAAATATTCCCTAAGGCTTCTTCAAAGCCAATTGGTGAAGGTCAGATaGCGATTTGGACGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: ILPSLQNDKYSLRLLQSQLVKVR*RFGRAW
Trigger: CCAGGCCCGTCCAAATCGCAATCTGACCTTCACCAA...TTGGCTTTGAAGAAGCCTTAGGGAATATTTGTCATTTTGGAGACTTGGCAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CAA 90 bp CAGTTATGTAAAACTTCGGCAGACTGGTCCCAAGAAATCTCAGCATTTTCCTTTCCGAGTGGCTCTTTCTaGGTGAAGGTCAGATTGCGA +
Preference number: 5 (lower is better)
Translates to: QLCKTSADWSQEISAFSFPSGSF*VKVRLR
Trigger: TCGCAATCTGACCTTCACCAAGAAAGAGCCACTCGG...AAAGGAAAATGCTGAGATTTCTTGGGACCAGTCTGCCGAAGTTTTACATAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR CAA 90 bp TGTCCTGCTATGCCACCTGAGCCTGGAATGATGTTGATGACCCCCTTTGGAAAGATCGATGTCCCCATTTaGGAATTTAGAAATGACCAT +
Preference number: 5 (lower is better)
Translates to: CPAMPPEPGMMLMTPFGKIDVPI*EFRNDH
Trigger: ATGGTCATTTCTAAATTCCAAAATGGGGACATCGAT...CTTTCCAAAGGGGGTCATCAACATCATTCCAGGCTCAGGTGGCATAGCAGGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR CAA 90 bp CCTCCTGCCTCAACACACCCAATCTTCTTAAGTGTGTCCAGAGTTGTAAAGGGCGTCACCGTCTTGGTTTaGAGATATTCATTTAGAGCT +
Preference number: 5 (lower is better)
Translates to: PPASTHPIFLSVSRVVKGVTVLV*RYSFRA
Trigger: AGCTCTAAATGAATATCTCAAAACCAAGACGGTGAC...GCCCTTTACAACTCTGGACACACTTAAGAAGATTGGGTGTGTTGAGGCAGGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CAA 90 bp ACTTGCAGAATTGTGTGTGTGCACATGAATTTTGGGGGTAGAAGCGGGACACAGAGGTCTGTGAACCCTTaGAAGATACTTGCAGAATTG +
Preference number: 5 (lower is better)
Translates to: TCRIVCVHMNFGGRSGTQRSVNP*KILAEL
Trigger: CAATTCTGCAAGTATCTTCAAAGGGTTCACAGACCT...CTGTGTCCCGCTTCTACCCCCAAAATTCATGTGCACACACACAATTCTGCAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CAA 90 bp AGACCAGTTGGGAGACTTGAGCAAAATTGTAGGAAAGAGGTAACAGGCCAGGTGTATTACACAGAGCCTTaGATTCTGATCAGCCAGATC +
Preference number: 5 (lower is better)
Translates to: RPVGRLEQNCRKEVTGQVYYTEP*ILISQI
Trigger: GATCTGGCTGATCAGAATCAAAGGCTCTGTGTAATA...CACCTGGCCTGTTACCTCTTTCCTACAATTTTGCTCAAGTCTCCCAACTGGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CAA 90 bp ACTTGCAGAATTGTGTGTGTGCACATGAATTTTGGGGGTAGAAGCGGGACACAGTATTACACAGAGCCTTaGATTCTGATCAGCCAGATC +
Preference number: 5 (lower is better)
Translates to: TCRIVCVHMNFGGRSGTQYYTEP*ILISQI
Trigger: GATCTGGCTGATCAGAATCAAAGGCTCTGTGTAATA...CTGTGTCCCGCTTCTACCCCCAAAATTCATGTGCACACACACAATTCTGCAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS TCA 90 bp CCGATTATAAAGTGCATCCACTGTATCATTGGGTTCAACATCACATaGTCTCTGAAGAAGGATGGGTCCTGTATCCAAGCCATCATCAGC +
Preference number: 5 (lower is better)
Translates to: PIIKCIHCIIGFNIT*SLKKDGSCIQAIIS
Trigger: GCTGATGATGGCTTGGATACAGGACCCATCCTTCTTCAGAGATCATGTGATGTTGAACCCAATGATACAGTGGATGCACTTTATAATCGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258494.14
ENST00000552270.1
ENST00000652515.1
CDS-3UTR CAA 90 bp ATTCTGCCAAGTCTCCAAAATGACAAATATTCCCTAAGGCTTCTTCAAAGCCAAGTGGCTATAGACTTCTaGTCCAAAGAGGCTCTGGCC +
Preference number: 5 (lower is better)
Translates to: ILPSLQNDKYSLRLLQSQVAIDF*SKEALA
Trigger: GGCCAGAGCCTCTTTGGACAAGAAGTCTATAGCCAC...TTGGCTTTGAAGAAGCCTTAGGGAATATTTGTCATTTTGGAGACTTGGCAGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CAA 90 bp TGCTTAAAGTGTCCACACCTCCCGATTCAGGTGATAATAAGATCACAGCTTCATTCAGCTTTTCCATCCTaGTCTGGAACTGTGAACACC +
Preference number: 5 (lower is better)
Translates to: CLKCPHLPIQVIIRSQLHSAFPS*SGTVNT
Trigger: GGTGTTCACAGTTCCAGACAAGGATGGAAAAGCTGA...ATGAAGCTGTGATCTTATTATCACCTGAATCGGGAGGTGTGGACACTTTAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CAA 90 bp TCGTTACCAAAAAGAACAAGTCCATTTTTGGTAACGAGACCAGGCTTCTTGGCATCAGCTTTTCCATCCTaGTCTGGAACTGTGAACACC +
Preference number: 5 (lower is better)
Translates to: SLPKRTSPFLVTRPGFLASAFPS*SGTVNT
Trigger: GGTGTTCACAGTTCCAGACAAGGATGGAAAAGCTGA...TGCCAAGAAGCCTGGTCTCGTTACCAAAAATGGACTTGTTCTTTTTGGTAACGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR CAA 90 bp TGGCTTGCATTTGTTCTGATGGCATGCATCTCTTCCCAAACTCTGTATTCAGTGAGAACAAGTCCATTTTaGGTAACGAGACCAGGCTTC +
Preference number: 5 (lower is better)
Translates to: WLAFVLMACISSQTLYSVRTSPF*VTRPGF
Trigger: GAAGCCTGGTCTCGTTACCAAAAATGGACTTGTTCT...CACTGAATACAGAGTTTGGGAAGAGATGCATGCCATCAGAACAAATGCAAGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CAA 90 bp ACTTGCAGAATTGTGTGTGTGCACATGAATTTTGGGGGTAGAAGCGGGACACAGTTTCCTCACGACCTTTaGGATAAAGCCTTCAAACTT +
Preference number: 5 (lower is better)
Translates to: TCRIVCVHMNFGGRSGTQFPHDL*DKAFKL
Trigger: AAGTTTGAAGGCTTTATCCAAAAGGTCGTGAGGAAA...CTGTGTCCCGCTTCTACCCCCAAAATTCATGTGCACACACACAATTCTGCAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CAA 90 bp TCATTAATCTTATGCTGTGTATATAGCACAGTGGCAAAGGGGAAAAATGACTTAGCCTGGCCTTTGGACTaGTCTTCCCCCGTACACCAA +
Preference number: 5 (lower is better)
Translates to: SLILCCVYSTVAKGKNDLAWPLD*SSPVHQ
Trigger: TTGGTGTACGGGGGAAGACAAGTCCAAAGGCCAGGC...TAAGTCATTTTTCCCCTTTGCCACTGTGCTATATACACAGCATAAGATTAATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000548418.1
CDS-3UTR CAA 90 bp ATTCTGCCAAGTCTCCAAAATGACAAATATTCCCTAAGGCTTCTTCAAAGCCAAGAAAAAGCCTGGCCTTaGGACTTGTCTTCCCCCGTA +
Preference number: 5 (lower is better)
Translates to: ILPSLQNDKYSLRLLQSQEKAWP*DLSSPV
Trigger: TACGGGGGAAGACAAGTCCAAAGGCCAGGCTTTTTC...TTGGCTTTGAAGAAGCCTTAGGGAATATTTGTCATTTTGGAGACTTGGCAGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CAA 90 bp TGGCTTGCATTTGTTCTGATGGCATGCATCTCTTCCCAAACTCTGTATTCAGTGGATAATGTTTCTAGGTaGATCACCCATCACAGTGGG +
Preference number: 5 (lower is better)
Translates to: WLAFVLMACISSQTLYSVDNVSR*ITHHSG
Trigger: CCCACTGTGATGGGTGATCAACCTAGAAACATTATC...CACTGAATACAGAGTTTGGGAAGAGATGCATGCCATCAGAACAAATGCAAGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CAA 90 bp TGGCTTGCATTTGTTCTGATGGCATGCATCTCTTCCCAAACTCTGTATTCAGTGGACCAGTTGGGAGACTaGAGCAAAATTGTAGGAAAG +
Preference number: 5 (lower is better)
Translates to: WLAFVLMACISSQTLYSVDQLGD*SKIVGK
Trigger: CTTTCCTACAATTTTGCTCAAGTCTCCCAACTGGTC...CACTGAATACAGAGTTTGGGAAGAGATGCATGCCATCAGAACAAATGCAAGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CAA 90 bp CCTCCTGCCTCAACACACCCAATCTTCTTAAGTGTGTCCAGAGTTGTAAAGGGCGAAAGCAAACATTTATaGGGCTCCTGTTACACATTA +
Preference number: 5 (lower is better)
Translates to: PPASTHPIFLSVSRVVKGESKHL*GSCYTL
Trigger: TAATGTGTAACAGGAGCCCAATAAATGTTTGCTTTC...GCCCTTTACAACTCTGGACACACTTAAGAAGATTGGGTGTGTTGAGGCAGGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS TCA 90 bp TTTTTGAAGGCATTGGAGACCCAGGACAGTGAGGATTCGAGGAACTaGAATTCAGGAGAGATGATCCAAAAAGTTGAGCTTGACATTTGG +
Preference number: 5 (lower is better)
Translates to: FLKALETQDSEDSRN*NSGEMIQKVELDIW
Trigger: CCAAATGTCAAGCTCAACTTTTTGGATCATCTCTCCTGAATTTCAGTTCCTCGAATCCTCACTGTCCTGGGTCTCCAATGCCTTCAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000550088.1
CDS-3UTR CAA 90 bp TGGCTTGCATTTGTTCTGATGGCATGCATCTCTTCCCAAACTCTGTATTCAGTGATAATTAGAGTCCAATaGATAGCAGAGGCTCCTCTG +
Preference number: 5 (lower is better)
Translates to: WLAFVLMACISSQTLYSVIIRVQ*IAEAPL
Trigger: CAGAGGAGCCTCTGCTATCAATTGGACTCTAATTAT...CACTGAATACAGAGTTTGGGAAGAGATGCATGCCATCAGAACAAATGCAAGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CAA 90 bp CTGACGTCTCACCCGTTGAAAAGTACTGAGAGGCAGGGATCATTTTTCCATCTTTTTCCTCACGACCTTTaGGATAAAGCCTTCAAACTT +
Preference number: 5 (lower is better)
Translates to: LTSHPLKSTERQGSFFHLFPHDL*DKAFKL
Trigger: AAGTTTGAAGGCTTTATCCAAAAGGTCGTGAGGAAA...AAGATGGAAAAATGATCCCTGCCTCTCAGTACTTTTCAACGGGTGAGACGTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR CAA 90 bp AGACCAGTTGGGAGACTTGAGCAAAATTGTAGGAAAGAGGTAACAGGCCAGGTGTTTCAAAAGCATCTTTaGCTGCTGCTACTGCTTTAT +
Preference number: 5 (lower is better)
Translates to: RPVGRLEQNCRKEVTGQVFQKHL*LLLLLY
Trigger: ATAAAGCAGTAGCAGCAGCAAAAGATGCTTTTGAAA...CACCTGGCCTGTTACCTCTTTCCTACAATTTTGCTCAAGTCTCCCAACTGGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CAA 90 bp ATTCTGCCAAGTCTCCAAAATGACAAATATTCCCTAAGGCTTCTTCAAAGCCAATTGAGCACTAAGGTATaGCCTGCTGCCAAACACGCA +
Preference number: 5 (lower is better)
Translates to: ILPSLQNDKYSLRLLQSQLSTKV*PAAKHA
Trigger: TGCGTGTTTGGCAGCAGGCAATACCTTAGTGCTCAA...TTGGCTTTGAAGAAGCCTTAGGGAATATTTGTCATTTTGGAGACTTGGCAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CAA 90 bp AGACCAGTTGGGAGACTTGAGCAAAATTGTAGGAAAGAGGTAACAGGCCAGGTGATCGATGTCCCCATTTaGGAATTTAGAAATGACCAT +
Preference number: 5 (lower is better)
Translates to: RPVGRLEQNCRKEVTGQVIDVPI*EFRNDH
Trigger: ATGGTCATTTCTAAATTCCAAAATGGGGACATCGAT...CACCTGGCCTGTTACCTCTTTCCTACAATTTTGCTCAAGTCTCCCAACTGGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CAA 90 bp TGGCTTGCATTTGTTCTGATGGCATGCATCTCTTCCCAAACTCTGTATTCAGTGTTTTCCAAAGCCAGATaGTTTAACTCCGCCAAATGG +
Preference number: 5 (lower is better)
Translates to: WLAFVLMACISSQTLYSVFSKAR*FNSAKW
Trigger: CCATTTGGCGGAGTTAAACAATCTGGCTTTGGAAAA...CACTGAATACAGAGTTTGGGAAGAGATGCATGCCATCAGAACAAATGCAAGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CAA 90 bp ATTCTGCCAAGTCTCCAAAATGACAAATATTCCCTAAGGCTTCTTCAAAGCCAAAGAGGCTCAGAGGAGTaGCGAGAGTTTCCCAAAGTT +
Preference number: 5 (lower is better)
Translates to: ILPSLQNDKYSLRLLQSQRGSEE*REFPKV
Trigger: AACTTTGGGAAACTCTCGCAACTCCTCTGAGCCTCT...TTGGCTTTGAAGAAGCCTTAGGGAATATTTGTCATTTTGGAGACTTGGCAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CAA 90 bp ATTCTGCCAAGTCTCCAAAATGACAAATATTCCCTAAGGCTTCTTCAAAGCCAAAGCAGGCTTGTTCTGTaGAGGAAGTCAAGGCAGTCA +
Preference number: 5 (lower is better)
Translates to: ILPSLQNDKYSLRLLQSQSRLVL*RKSRQS
Trigger: TGACTGCCTTGACTTCCTCAACAGAACAAGCCTGCT...TTGGCTTTGAAGAAGCCTTAGGGAATATTTGTCATTTTGGAGACTTGGCAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CAA 90 bp ACTTGCAGAATTGTGTGTGTGCACATGAATTTTGGGGGTAGAAGCGGGACACAGGGCTCAAAAATAGCCTaGATGAGAGTATTTACACAT +
Preference number: 5 (lower is better)
Translates to: TCRIVCVHMNFGGRSGTQGSKIA*MRVFTH
Trigger: ATGTGTAAATACTCTCATCAAGGCTATTTTTGAGCC...CTGTGTCCCGCTTCTACCCCCAAAATTCATGTGCACACACACAATTCTGCAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CAA 90 bp TTTAAACAGACGAGTGAAGTGACACTGTCTGACTTAAGCTTTGAACAGGACCGCTATGGGGAACCAAATTaGTTTCCTTACCCTAGCTCT +
Preference number: 5 (lower is better)
Translates to: FKQTSEVTLSDLSFEQDRYGEPN*FPYPSS
Trigger: AGAGCTAGGGTAAGGAAACAAATTTGGTTCCCCATA...GCGGTCCTGTTCAAAGCTTAAGTCAGACAGTGTCACTTCACTCGTCTGTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CAA 90 bp TCAATAATGGGGACATTGCTTAAAATTCCAGCCCAGATGACCTTGATGGTCTCTGCATCCACTGTATCATaGGGTTCAACATCACATGAT +
Preference number: 5 (lower is better)
Translates to: SIMGTLLKIPAQMTLMVSASTVS*GSTSHD
Trigger: ATCATGTGATGTTGAACCCAATGATACAGTGGATGC...AGAGACCATCAAGGTCATCTGGGCTGGAATTTTAAGCAATGTCCCCATTATTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR CAA 90 bp ATCAACATCCGCCAAAGAAGCGTAGGATACTTTGCATATTGTAGATCCATCTGTAGAACAAGTCCATTTTaGGTAACGAGACCAGGCTTC +
Preference number: 5 (lower is better)
Translates to: INIRQRSVGYFAYCRSICRTSPF*VTRPGF
Trigger: GAAGCCTGGTCTCGTTACCAAAAATGGACTTGTTCT...ACAGATGGATCTACAATATGCAAAGTATCCTACGCTTCTTTGGCGGATGTTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR CAA 90 bp TGTTTGCCAATAGGAGTGGATCCAGTGAAACCAAGTTTGCGGATGTCAGGATGTTTTCAAAAGCATCTTTaGCTGCTGCTACTGCTTTAT +
Preference number: 5 (lower is better)
Translates to: CLPIGVDPVKPSLRMSGCFQKHL*LLLLLY
Trigger: ATAAAGCAGTAGCAGCAGCAAAAGATGCTTTTGAAA...ACATCCTGACATCCGCAAACTTGGTTTCACTGGATCCACTCCTATTGGCAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR CAA 90 bp TGCTTAAAGTGTCCACACCTCCCGATTCAGGTGATAATAAGATCACAGCTTCATGAAACTTTCTTCAAGTaGCTAACAGCACAGCTCTTC +
Preference number: 5 (lower is better)
Translates to: CLKCPHLPIQVIIRSQLHETFFK*LTAQLF
Trigger: GAAGAGCTGTGCTGTTAGCAACTTGAAGAAAGTTTC...ATGAAGCTGTGATCTTATTATCACCTGAATCGGGAGGTGTGGACACTTTAAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CAA 90 bp TTTAAACAGACGAGTGAAGTGACACTGTCTGACTTAAGCTTTGAACAGGACCGCATACAGTTCTCTCCTTaGTTGAAAAATACTGCTCCC +
Preference number: 5 (lower is better)
Translates to: FKQTSEVTLSDLSFEQDRIQFSP*LKNTAP
Trigger: GGGAGCAGTATTTTTCAACAAAGGAGAGAACTGTAT...GCGGTCCTGTTCAAAGCTTAAGTCAGACAGTGTCACTTCACTCGTCTGTTTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CAA 90 bp AAAAATACTGCTCCCATGCCCATTCGCACAGCCTTGTCAAGTTCACAGTCATTAATACAGTTCTCTCCTTaGTTGAAAAATACTGCTCCC +
Preference number: 5 (lower is better)
Translates to: KNTAPMPIRTALSSSQSLIQFSP*LKNTAP
Trigger: GGGAGCAGTATTTTTCAACAAAGGAGAGAACTGTAT...TAATGACTGTGAACTTGACAAGGCTGTGCGAATGGGCATGGGAGCAGTATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR CAA 90 bp TGGCTTGCATTTGTTCTGATGGCATGCATCTCTTCCCAAACTCTGTATTCAGTGATACAGTTCTCTCCTTaGTTGAAAAATACTGCTCCC +
Preference number: 5 (lower is better)
Translates to: WLAFVLMACISSQTLYSVIQFSP*LKNTAP
Trigger: GGGAGCAGTATTTTTCAACAAAGGAGAGAACTGTAT...CACTGAATACAGAGTTTGGGAAGAGATGCATGCCATCAGAACAAATGCAAGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CAA 90 bp TTAATCTTATGCTGTGTATATAGCACAGTGGCAAAGGGGAAAAATGACTTATCTGAAAAAGCCTGGCCTTaGGACTTGTCTTCCCCCGTA +
Preference number: 5 (lower is better)
Translates to: LILCCVYSTVAKGKNDLSEKAWP*DLSSPV
Trigger: TACGGGGGAAGACAAGTCCAAAGGCCAGGCTTTTTC...AGATAAGTCATTTTTCCCCTTTGCCACTGTGCTATATACACAGCATAAGATTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000548418.1
CDS-3UTR CAA 90 bp TGTTGTTTAGTTTTTATTGATTCCCTACAATCCCCTCATGTTATTCTGCCAAGTAGGCCCATACTGGAGTaGGGGAGGGTTGTTCATATC +
Preference number: 5 (lower is better)
Translates to: CCLVFIDSLQSPHVILPSRPILE*GRVVHI
Trigger: GATATGAACAACCCTCCCCAACTCCAGTATGGGCCT...ACTTGGCAGAATAACATGAGGGGATTGTAGGGAATCAATAAAAACTAAACAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CAA 90 bp TGGCTTGCATTTGTTCTGATGGCATGCATCTCTTCCCAAACTCTGTATTCAGTGCATATCGTATTATTATaGACAGAAGGCCCATACTGG +
Preference number: 5 (lower is better)
Translates to: WLAFVLMACISSQTLYSVHIVLL*TEGPYW
Trigger: CCAGTATGGGCCTTCTGTCAATAATAATACGATATG...CACTGAATACAGAGTTTGGGAAGAGATGCATGCCATCAGAACAAATGCAAGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CAA 90 bp TGTTGTTTAGTTTTTATTGATTCCCTACAATCCCCTCATGTTATTCTGCCAAGTGTGTATGGACAAGAGTaGCAGGAAGAGGCAGTGGTG +
Preference number: 5 (lower is better)
Translates to: CCLVFIDSLQSPHVILPSVYGQE*QEEAVV
Trigger: CACCACTGCCTCTTCCTGCAACTCTTGTCCATACAC...ACTTGGCAGAATAACATGAGGGGATTGTAGGGAATCAATAAAAACTAAACAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS GCA 90 bp CTAAGGACGGAGAATTCAGAGGTAAACACATATGGATCAGATCTCTaGCCTTATAGAGATCATGGTCCAGTAGGCAAGAAAGACATTAAA +
Preference number: 5 (lower is better)
Translates to: LRTENSEVNTYGSDL*PYRDHGPVGKKDIK
Trigger: TTTAATGTCTTTCTTGCCTACTGGACCATGATCTCTATAAGGGCAGAGATCTGATCCATATGTGTTTACCTCTGAATTCTCCGTCCTTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549335.5
CDS-3UTR CAA 90 bp TGTTGTTTAGTTTTTATTGATTCCCTACAATCCCCTCATGTTATTCTGCCAAGTTTGATGGTCTTGCCCTaGACCCTCCATTTAGGAAGC +
Preference number: 5 (lower is better)
Translates to: CCLVFIDSLQSPHVILPSLMVLP*TLHLGS
Trigger: GCTTCCTAAATGGAGGGTCAAGGGCAAGACCATCAA...ACTTGGCAGAATAACATGAGGGGATTGTAGGGAATCAATAAAAACTAAACAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CAA 90 bp CTTTTGGATAAAGCCTTCAAACTTGGTGGCCATATAGACATCTTCATTCTGCAAACTTCTTTGATGGTCTaGCCCTTGACCCTCCATTTA +
Preference number: 5 (lower is better)
Translates to: LLDKAFKLGGHIDIFILQTSLMV*PLTLHL
Trigger: TAAATGGAGGGTCAAGGGCAAGACCATCAAAGAAGT...TTGCAGAATGAAGATGTCTATATGGCCACCAAGTTTGAAGGCTTTATCCAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR CAA 90 bp ATCAACATCCGCCAAAGAAGCGTAGGATACTTTGCATATTGTAGATCCATCTGTTCAATAATGGGGACATaGCTTAAAATTCCAGCCCAG +
Preference number: 5 (lower is better)
Translates to: INIRQRSVGYFAYCRSICSIMGT*LKIPAQ
Trigger: CTGGGCTGGAATTTTAAGCAATGTCCCCATTATTGA...ACAGATGGATCTACAATATGCAAAGTATCCTACGCTTCTTTGGCGGATGTTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR CAA 90 bp ATTCTGCCAAGTCTCCAAAATGACAAATATTCCCTAAGGCTTCTTCAAAGCCAACTCTTCATGATCTGTTaGCCAATAGGAGTGGATCCA +
Preference number: 5 (lower is better)
Translates to: ILPSLQNDKYSLRLLQSQLFMIC*PIGVDP
Trigger: TGGATCCACTCCTATTGGCAAACAGATCATGAAGAG...TTGGCTTTGAAGAAGCCTTAGGGAATATTTGTCATTTTGGAGACTTGGCAGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CAA 90 bp ATCAACATCCGCCAAAGAAGCGTAGGATACTTTGCATATTGTAGATCCATCTGTGAAACTTTCTTCAAGTaGCTAACAGCACAGCTCTTC +
Preference number: 5 (lower is better)
Translates to: INIRQRSVGYFAYCRSICETFFK*LTAQLF
Trigger: GAAGAGCTGTGCTGTTAGCAACTTGAAGAAAGTTTC...ACAGATGGATCTACAATATGCAAAGTATCCTACGCTTCTTTGGCGGATGTTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR CAA 90 bp TGCTTAAAGTGTCCACACCTCCCGATTCAGGTGATAATAAGATCACAGCTTCATGATTCCCAAAGAGTTTaGCAGCCCAGAGAATATTTA +
Preference number: 5 (lower is better)
Translates to: CLKCPHLPIQVIIRSQLHDSQRV*QPREYL
Trigger: TAAATATTCTCTGGGCTGCAAAACTCTTTGGGAATC...ATGAAGCTGTGATCTTATTATCACCTGAATCGGGAGGTGTGGACACTTTAAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CAA 90 bp TTTAAACAGACGAGTGAAGTGACACTGTCTGACTTAAGCTTTGAACAGGACCGCGGCTCAAAAATAGCCTaGATGAGAGTATTTACACAT +
Preference number: 5 (lower is better)
Translates to: FKQTSEVTLSDLSFEQDRGSKIA*MRVFTH
Trigger: ATGTGTAAATACTCTCATCAAGGCTATTTTTGAGCC...GCGGTCCTGTTCAAAGCTTAAGTCAGACAGTGTCACTTCACTCGTCTGTTTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CAA 90 bp TTTAAACAGACGAGTGAAGTGACACTGTCTGACTTAAGCTTTGAACAGGACCGCGAAAGCAAACATTTATaGGGCTCCTGTTACACATTA +
Preference number: 5 (lower is better)
Translates to: FKQTSEVTLSDLSFEQDRESKHL*GSCYTL
Trigger: TAATGTGTAACAGGAGCCCAATAAATGTTTGCTTTC...GCGGTCCTGTTCAAAGCTTAAGTCAGACAGTGTCACTTCACTCGTCTGTTTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CAA 90 bp TTTAAACAGACGAGTGAAGTGACACTGTCTGACTTAAGCTTTGAACAGGACCGCCTCAACAAATTATGGTaGAGTCAGTCTTACTTTCCT +
Preference number: 5 (lower is better)
Translates to: FKQTSEVTLSDLSFEQDRLNKLW*SQSYFP
Trigger: AGGAAAGTAAGACTGACTCAACCATAATTTGTTGAG...GCGGTCCTGTTCAAAGCTTAAGTCAGACAGTGTCACTTCACTCGTCTGTTTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS CCA 90 bp CTTCAGGAAAAAGAAACCGATTATAAAGTGCATCCACTGTATCATTaGGTTCAACATCACATGATCTCTGAAGAAGGATGGGTCCTGTAT +
Preference number: 5 (lower is better)
Translates to: LQEKETDYKVHPLYH*VQHHMISEEGWVLY
Trigger: ATACAGGACCCATCCTTCTTCAGAGATCATGTGATGTTGAACCCAATGATACAGTGGATGCACTTTATAATCGGTTTCTTTTTCCTGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258494.14
ENST00000552270.1
ENST00000652515.1
CDS-3UTR CAA 90 bp TGTTGTTTAGTTTTTATTGATTCCCTACAATCCCCTCATGTTATTCTGCCAAGTACGAGACCAGGCTTCTaGGCACCTTTAATTTCCAGT +
Preference number: 5 (lower is better)
Translates to: CCLVFIDSLQSPHVILPSTRPGF*APLISS
Trigger: ACTGGAAATTAAAGGTGCCAAGAAGCCTGGTCTCGT...ACTTGGCAGAATAACATGAGGGGATTGTAGGGAATCAATAAAAACTAAACAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CAA 90 bp ATTCTGCCAAGTCTCCAAAATGACAAATATTCCCTAAGGCTTCTTCAAAGCCAATCAATAATGGGGACATaGCTTAAAATTCCAGCCCAG +
Preference number: 5 (lower is better)
Translates to: ILPSLQNDKYSLRLLQSQSIMGT*LKIPAQ
Trigger: CTGGGCTGGAATTTTAAGCAATGTCCCCATTATTGA...TTGGCTTTGAAGAAGCCTTAGGGAATATTTGTCATTTTGGAGACTTGGCAGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CAA 90 bp TGTTGTTTAGTTTTTATTGATTCCCTACAATCCCCTCATGTTATTCTGCCAAGTCCCATTCGCACAGCCTaGTCAAGTTCACAGTCATTA +
Preference number: 5 (lower is better)
Translates to: CCLVFIDSLQSPHVILPSPIRTA*SSSQSL
Trigger: TAATGACTGTGAACTTGACAAGGCTGTGCGAATGGG...ACTTGGCAGAATAACATGAGGGGATTGTAGGGAATCAATAAAAACTAAACAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CAA 90 bp TCATTAATCTTATGCTGTGTATATAGCACAGTGGCAAAGGGGAAAAATGACTTAATGAGCCTTATGATTTaGGGGCCCATGATCAGTGGA +
Preference number: 5 (lower is better)
Translates to: SLILCCVYSTVAKGKNDLMSLMI*GPMISG
Trigger: TCCACTGATCATGGGCCCCAAAATCATAAGGCTCAT...TAAGTCATTTTTCCCCTTTGCCACTGTGCTATATACACAGCATAAGATTAATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000548418.1
CDS-3UTR CAA 90 bp TGTTGTTTAGTTTTTATTGATTCCCTACAATCCCCTCATGTTATTCTGCCAAGTCACCAGATGCATTGCTaGAAAACCTGTTCTGCCACT +
Preference number: 5 (lower is better)
Translates to: CCLVFIDSLQSPHVILPSHQMHC*KTCSAT
Trigger: AGTGGCAGAACAGGTTTTCAAGCAATGCATCTGGTG...ACTTGGCAGAATAACATGAGGGGATTGTAGGGAATCAATAAAAACTAAACAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CAA 90 bp TGTTGTTTAGTTTTTATTGATTCCCTACAATCCCCTCATGTTATTCTGCCAAGTCTCTTCATGATCTGTTaGCCAATAGGAGTGGATCCA +
Preference number: 5 (lower is better)
Translates to: CCLVFIDSLQSPHVILPSLFMIC*PIGVDP
Trigger: TGGATCCACTCCTATTGGCAAACAGATCATGAAGAG...ACTTGGCAGAATAACATGAGGGGATTGTAGGGAATCAATAAAAACTAAACAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CAA 90 bp GTCCCCATTTTGGAATTTAGAAATGACCATAATAGGCCCAAAGGATTCCTCTTTGTCACCGTCTTGGTTTaGAGATATTCATTTAGAGCT +
Preference number: 5 (lower is better)
Translates to: VPILEFRNDHNRPKGFLFVTVLV*RYSFRA
Trigger: AGCTCTAAATGAATATCTCAAAACCAAGACGGTGAC...AAAGAGGAATCCTTTGGGCCTATTATGGTCATTTCTAAATTCCAAAATGGGGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552270.1
CDS-3UTR CAA 90 bp TGTTGTTTAGTTTTTATTGATTCCCTACAATCCCCTCATGTTATTCTGCCAAGTGCATCCACTGTATCATaGGGTTCAACATCACATGAT +
Preference number: 5 (lower is better)
Translates to: CCLVFIDSLQSPHVILPSASTVS*GSTSHD
Trigger: ATCATGTGATGTTGAACCCAATGATACAGTGGATGC...ACTTGGCAGAATAACATGAGGGGATTGTAGGGAATCAATAAAAACTAAACAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CAA 90 bp TGTTGTTTAGTTTTTATTGATTCCCTACAATCCCCTCATGTTATTCTGCCAAGTTCAATAATGGGGACATaGCTTAAAATTCCAGCCCAG +
Preference number: 5 (lower is better)
Translates to: CCLVFIDSLQSPHVILPSSIMGT*LKIPAQ
Trigger: CTGGGCTGGAATTTTAAGCAATGTCCCCATTATTGA...ACTTGGCAGAATAACATGAGGGGATTGTAGGGAATCAATAAAAACTAAACAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CAA 90 bp TGTTGTTTAGTTTTTATTGATTCCCTACAATCCCCTCATGTTATTCTGCCAAGTTTTTCCAAAGCCAGATaGTTTAACTCCGCCAAATGG +
Preference number: 5 (lower is better)
Translates to: CCLVFIDSLQSPHVILPSFSKAR*FNSAKW
Trigger: CCATTTGGCGGAGTTAAACAATCTGGCTTTGGAAAA...ACTTGGCAGAATAACATGAGGGGATTGTAGGGAATCAATAAAAACTAAACAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CAA 90 bp ATTCTGCCAAGTCTCCAAAATGACAAATATTCCCTAAGGCTTCTTCAAAGCCAATCCAATAAATGCACCTaGTGTATTATAACTGCATGG +
Preference number: 5 (lower is better)
Translates to: ILPSLQNDKYSLRLLQSQSNKCT*CIITAW
Trigger: CCATGCAGTTATAATACACAAGGTGCATTTATTGGA...TTGGCTTTGAAGAAGCCTTAGGGAATATTTGTCATTTTGGAGACTTGGCAGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CAA 90 bp TGTTGTTTAGTTTTTATTGATTCCCTACAATCCCCTCATGTTATTCTGCCAAGTTTTCCTCACGACCTTTaGGATAAAGCCTTCAAACTT +
Preference number: 5 (lower is better)
Translates to: CCLVFIDSLQSPHVILPSFPHDL*DKAFKL
Trigger: AAGTTTGAAGGCTTTATCCAAAAGGTCGTGAGGAAA...ACTTGGCAGAATAACATGAGGGGATTGTAGGGAATCAATAAAAACTAAACAACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS TCA 90 bp CATTTGAGGATTTCCAGTTGGCACAAAAATATTTCCAAAACTAACTaGAGAGACAAGATAGCAACGTACACAATGAATTACAAACACTGC +
Preference number: 5 (lower is better)
Translates to: HLRISSWHKNISKTN*RDKIATYTMNYKHC
Trigger: GCAGTGTTTGTAATTCATTGTGTACGTTGCTATCTTGTCTCTTCAGTTAGTTTTGGAAATATTTTTGTGCCAACTGGAAATCCTCAAATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000549335.5
CDS-3UTR CAA 90 bp TGTTGTTTAGTTTTTATTGATTCCCTACAATCCCCTCATGTTATTCTGCCAAGTTTTCAAAAGCATCTTTaGCTGCTGCTACTGCTTTAT +
Preference number: 5 (lower is better)
Translates to: CCLVFIDSLQSPHVILPSFQKHL*LLLLLY
Trigger: ATAAAGCAGTAGCAGCAGCAAAAGATGCTTTTGAAA...ACTTGGCAGAATAACATGAGGGGATTGTAGGGAATCAATAAAAACTAAACAACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CAA 90 bp TGTTGTTTAGTTTTTATTGATTCCCTACAATCCCCTCATGTTATTCTGCCAAGTGTCCCGGAGAACTATTaGTTAAATATTTTACCAGCA +
Preference number: 5 (lower is better)
Translates to: CCLVFIDSLQSPHVILPSVPENY*LNILPA
Trigger: TGCTGGTAAAATATTTAACAAATAGTTCTCCGGGAC...ACTTGGCAGAATAACATGAGGGGATTGTAGGGAATCAATAAAAACTAAACAACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS-3UTR CAA 90 bp TGTTGTTTAGTTTTTATTGATTCCCTACAATCCCCTCATGTTATTCTGCCAAGTCTCAACAAATTATGGTaGAGTCAGTCTTACTTTCCT +
Preference number: 5 (lower is better)
Translates to: CCLVFIDSLQSPHVILPSLNKLW*SQSYFP
Trigger: AGGAAAGTAAGACTGACTCAACCATAATTTGTTGAG...ACTTGGCAGAATAACATGAGGGGATTGTAGGGAATCAATAAAAACTAAACAACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258494.14
ENST00000652515.1
CDS GCA 72 bp GAAGCCCGAGCCGGGTCGCAAGACGCCCGCTGGCACTaGCGGCGCCATGGCGGCCGCCTTCGGCCACGGCGG +
Preference number: 6 (lower is better)
Translates to: EARAGSQDARWH*RRHGGRLRPRR
Trigger: CCGCCGTGGCCGAAGGCGGCCGCCATGGCGCCGGCAGTGCCAGCGGGCGTCTTGCGACCCGGCTCGGGCTTC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652515.1
CDS CCA 72 bp GGTGGCGAAGCCCGAGCCGGGTCGCAAGACGCCCGCTaGCACTGCCGGCGCCATGGCGGCCGCCTTCGGCCA +
Preference number: 6 (lower is better)
Translates to: GGEARAGSQDAR*HCRRHGGRLRP
Trigger: TGGCCGAAGGCGGCCGCCATGGCGCCGGCAGTGCCAGCGGGCGTCTTGCGACCCGGCTCGGGCTTCGCCACC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652515.1
CDS CCA 72 bp AGAGTGCCGAAGTGGCTTGAGAAGCACAGTGAATGGTaGCGAAGCCCGAGCCGGGTCGCAAGACGCCCGCTG +
Preference number: 6 (lower is better)
Translates to: RVPKWLEKHSEW*RSPSRVARRPL
Trigger: CAGCGGGCGTCTTGCGACCCGGCTCGGGCTTCGCCACCATTCACTGTGCTTCTCAAGCCACTTCGGCACTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652515.1
CDS CCA 72 bp ATTAGAGTGCCGAAGTGGCTTGAGAAGCACAGTGAATaGTGGCGAAGCCCGAGCCGGGTCGCAAGACGCCCG +
Preference number: 6 (lower is better)
Translates to: IRVPKWLEKHSE*WRSPSRVARRP
Trigger: CGGGCGTCTTGCGACCCGGCTCGGGCTTCGCCACCATTCACTGTGCTTCTCAAGCCACTTCGGCACTCTAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652515.1
CDS TCA 72 bp GGGGAGCCGAAAGCAGTAGCTGAGAGGTGGAAAAGCTaGTCAGGTTTGGCAGGCTCTGCCAAGCTCTCCTGC +
Preference number: 6 (lower is better)
Translates to: GEPKAVAERWKS*SGLAGSAKLSC
Trigger: GCAGGAGAGCTTGGCAGAGCCTGCCAAACCTGATCAGCTTTTCCACCTCTCAGCTACTGCTTTCGGCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550088.1
CDS CCA 72 bp CTCCTACGGTGGCGACAGAGAGGGAAACAGGCTTGTTaGAAGAAGCGCCTGGTCAGCGTTATCCTCGAGGAT +
Preference number: 6 (lower is better)
Translates to: LLRWRQRGKQAC*KKRLVSVILED
Trigger: ATCCTCGAGGATAACGCTGACCAGGCGCTTCTTCCAACAAGCCTGTTTCCCTCTCTGTCGCCACCGTAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652515.1
CDS CAA 72 bp ACTCCTACGGTGGCGACAGAGAGGGAAACAGGCTTGTaGGAAGAAGCGCCTGGTCAGCGTTATCCTCGAGGA +
Preference number: 6 (lower is better)
Translates to: TPTVATERETGL*EEAPGQRYPRG
Trigger: TCCTCGAGGATAACGCTGACCAGGCGCTTCTTCCAACAAGCCTGTTTCCCTCTCTGTCGCCACCGTAGGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652515.1
CDS CAA 90 bp AAATCGTCTAGAGAGAGCAGGGCGAAATTAGAGTGCCGAAGTGGCTaGAGAAGCACAGTGAATGGTGGCGAAGCCCGAGCCGGGTCGCAA +
Preference number: 6 (lower is better)
Translates to: KSSRESRAKLECRSG*RSTVNGGEARAGSQ
Trigger: TTGCGACCCGGCTCGGGCTTCGCCACCATTCACTGTGCTTCTCAAGCCACTTCGGCACTCTAATTTCGCCCTGCTCTCTCTAGACGATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652515.1
CDS CAA 90 bp GCTGTAGGAACTCCTACGGTGGCGACAGAGAGGGAAACAGGCTTGTaGGAAGAAGCGCCTGGTCAGCGTTATCCTCGAGGATCATGCCTT +
Preference number: 6 (lower is better)
Translates to: AVGTPTVATERETGL*EEAPGQRYPRGSCL
Trigger: AAGGCATGATCCTCGAGGATAACGCTGACCAGGCGCTTCTTCCAACAAGCCTGTTTCCCTCTCTGTCGCCACCGTAGGAGTTCCTACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652515.1
CDS CAA 90 bp AGAGCTGTAGGAACTCCTACGGTGGCGACAGAGAGGGAAACAGGCTaGTTGGAAGAAGCGCCTGGTCAGCGTTATCCTCGAGGATCATGC +
Preference number: 6 (lower is better)
Translates to: RAVGTPTVATERETG*LEEAPGQRYPRGSC
Trigger: GCATGATCCTCGAGGATAACGCTGACCAGGCGCTTCTTCCAACAAGCCTGTTTCCCTCTCTGTCGCCACCGTAGGAGTTCCTACAGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652515.1
CDS CAA 72 bp TCTGCAGCCAAAGCCAGAGGGTCAGCTTTTCCATCCTaGTCTGGAACTGTGAACACCCCTACTACTCGGTGG +
Preference number: 6 (lower is better)
Translates to: SAAKARGSAFPS*SGTVNTPTTRW
Trigger: CCACCGAGTAGTAGGGGTGTTCACAGTTCCAGACAAGGATGGAAAAGCTGACCCTCTGGCTTTGGCTGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258494.14
ENST00000552270.1
ENST00000552427.1
ENST00000652515.1
CDS CAA 90 bp CCATCTTTCTCTGCAGCCAAAGCCAGAGGGTCAGCTTTTCCATCCTaGTCTGGAACTGTGAACACCCCTACTACTCGGTGGCCCTCTTTG +
Preference number: 6 (lower is better)
Translates to: PSFSAAKARGSAFPS*SGTVNTPTTRWPSL
Trigger: CAAAGAGGGCCACCGAGTAGTAGGGGTGTTCACAGTTCCAGACAAGGATGGAAAAGCTGACCCTCTGGCTTTGGCTGCAGAGAAAGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258494.14
ENST00000552270.1
ENST00000552427.1
ENST00000652515.1
CDS GCA 72 bp GAAGAAGCGCCTGGTCAGCGTTATCCTCGAGGATCATaGCTTCCTGTTAATTCCCCACCCCATCAATTCTAC +
Preference number: 6 (lower is better)
Translates to: EEAPGQRYPRGS*LPVNSPPHQFY
Trigger: GTAGAATTGATGGGGTGGGGAATTAACAGGAAGGCATGATCCTCGAGGATAACGCTGACCAGGCGCTTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652515.1
CDS CAA 72 bp CTGAGCTGTTCCTTTGGGGCCACTCTAGAGTCCAGCTaGAAATCCCCCTCCGACAATCTTTGTTCCAGATCT +
Preference number: 6 (lower is better)
Translates to: LSCSFGATLESS*KSPSDNLCSRS
Trigger: AGATCTGGAACAAAGATTGTCGGAGGGGGATTTCAAGCTGGACTCTAGAGTGGCCCCAAAGGAACAGCTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000549335.5
CDS CAA 90 bp AGTGGTTCTCTGAGCTGTTCCTTTGGGGCCACTCTAGAGTCCAGCTaGAAATCCCCCTCCGACAATCTTTGTTCCAGATCTTGCTTGTAT +
Preference number: 6 (lower is better)
Translates to: SGSLSCSFGATLESS*KSPSDNLCSRSCLY
Trigger: ATACAAGCAAGATCTGGAACAAAGATTGTCGGAGGGGGATTTCAAGCTGGACTCTAGAGTGGCCCCAAAGGAACAGCTCAGAGAACCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000549335.5
CDS CCA 72 bp TTCTGGATACCTTCATATGTTGCCCCTTCTTCTGGCTaGGGTATACGAGGAGCTTTTCCATCAGCTATGAGT +
Preference number: 6 (lower is better)
Translates to: FWIPSYVAPSSG*GIRGAFPSAMS
Trigger: ACTCATAGCTGATGGAAAAGCTCCTCGTATACCCCAGCCAGAAGAAGGGGCAACATATGAAGGTATCCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258494.14
ENST00000552270.1
ENST00000652515.1
CDS CCA 72 bp TTTCTTCTACCACTCTTGTCACAAATTCGTCGTGGATaGATTCTTCCACGAACAACCGCCCAGCAGCAATAC +
Preference number: 6 (lower is better)
Translates to: FLLPLLSQIRRG*ILPRTTAQQQY
Trigger: GTATTGCTGCTGGGCGGTTGTTCGTGGAAGAATCCATCCACGACGAATTTGTGACAAGAGTGGTAGAAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258494.14
ENST00000549335.5
ENST00000652515.1
CDS CAA 72 bp GTATTGCAGCAGCTTTTCCAGATGAGCCTTATGATTTaGGGGCCCATGATCAGTGGATCTGTCAAGTGGATC +
Preference number: 6 (lower is better)
Translates to: VLQQLFQMSLMI*GPMISGSVKWI
Trigger: GATCCACTTGACAGATCCACTGATCATGGGCCCCAAAATCATAAGGCTCATCTGGAAAAGCTGCTGCAATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258494.14
ENST00000548418.1
ENST00000549335.5
ENST00000652515.1
CDS TCA 72 bp AGCCGTGCTTTGGACTATCAATTATATCCATGGGAATaGACTGAGTGCAGAAAGGGAGCACATTTAGCTCTG +
Preference number: 6 (lower is better)
Translates to: SRALDYQLYPWE*TECRKGAHLAL
Trigger: CAGAGCTAAATGTGCTCCCTTTCTGCACTCAGTTCATTCCCATGGATATAATTGATAGTCCAAAGCACGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258494.14
ENST00000552270.1
ENST00000552427.1
ENST00000652515.1
CDS TCA 72 bp ACAGTGAGGATTCGAGGAACTGAAATTCAGGAGAGATaGTCCAAAAAGTTGAGCTTGACATTTGGCACCACA +
Preference number: 6 (lower is better)
Translates to: TVRIRGTEIQER*SKKLSLTFGTT
Trigger: TGTGGTGCCAAATGTCAAGCTCAACTTTTTGGATCATCTCTCCTGAATTTCAGTTCCTCGAATCCTCACTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550088.1
CDS TCA 72 bp AAAATCCTTTTTGAAGGCATTGGAGACCCAGGACAGTaGGGATTCGAGGAACTGAAATTCAGGAGAGATGAT +
Preference number: 6 (lower is better)
Translates to: KILFEGIGDPGQ*GFEELKFRRDD
Trigger: ATCATCTCTCCTGAATTTCAGTTCCTCGAATCCTCACTGTCCTGGGTCTCCAATGCCTTCAAAAAGGATTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550088.1
CDS TCA 72 bp AACCACATTCCCAGAACCCACACTTCTGAGAACCCATaGACATTTGAGGATTTCCAGTTGGCACAAAAATAT +
Preference number: 6 (lower is better)
Translates to: NHIPRTHTSENP*TFEDFQLAQKY
Trigger: ATATTTTTGTGCCAACTGGAAATCCTCAAATGTTCATGGGTTCTCAGAAGTGTGGGTTCTGGGAATGTGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000549335.5
CDS CCA 72 bp CAGGATGGATGGGTGATAAATGATAGAGCCGTGCTTTaGACTATCAATTATATCCATGGGAATGAACTGAGT +
Preference number: 6 (lower is better)
Translates to: QDGWVINDRAVL*TINYIHGNELS
Trigger: ACTCAGTTCATTCCCATGGATATAATTGATAGTCCAAAGCACGGCTCTATCATTTATCACCCATCCATCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258494.14
ENST00000552270.1
ENST00000552427.1
ENST00000652515.1
CDS CAA 72 bp TCTAGAGTCCAGCTTGAAATCCCCCTCCGACAATCTTaGTTCCAGATCTTGCTTGTATTAGTTCATTCTCAT +
Preference number: 6 (lower is better)
Translates to: SRVQLEIPLRQS*FQILLVLVHSH
Trigger: ATGAGAATGAACTAATACAAGCAAGATCTGGAACAAAGATTGTCGGAGGGGGATTTCAAGCTGGACTCTAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000549335.5
CDS CAA 90 bp AGAGTCCAGCTTGAAATCCCCCTCCGACAATCTTTGTTCCAGATCTaGCTTGTATTAGTTCATTCTCATGCTATACATCAATCTTCCTCT +
Preference number: 6 (lower is better)
Translates to: RVQLEIPLRQSLFQI*LVLVHSHAIHQSSS
Trigger: AGAGGAAGATTGATGTATAGCATGAGAATGAACTAATACAAGCAAGATCTGGAACAAAGATTGTCGGAGGGGGATTTCAAGCTGGACTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000549335.5
CDS TCA 72 bp TGTTGCTCTAATATTCCAGTGTCACCGTCTTGGTTTTaGGATATTCATTTAGAGCTTCCTCACCTAAGTCTT +
Preference number: 6 (lower is better)
Translates to: CCSNIPVSPSWF*DIHLELPHLSL
Trigger: AAGACTTAGGTGAGGAAGCTCTAAATGAATATCTCAAAACCAAGACGGTGACACTGGAATATTAGAGCAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258494.14
ENST00000549335.5
ENST00000652515.1
CDS CAA 90 bp AAGAATTACAAAGGAGAAGCAGAGGGTATTGGAAGCATATATAACTaGCCTCATCTATGTGTAAGAAGTAGAACAATGACTGAGCCAGTA +
Preference number: 6 (lower is better)
Translates to: KNYKGEAEGIGSIYN*PHLCVRSRTMTEPV
Trigger: TACTGGCTCAGTCATTGTTCTACTTCTTACACATAGATGAGGCAAGTTATATATGCTTCCAATACCCTCTGCTTCTCCTTTGTAATTCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549335.5
CDS CAA 72 bp AAAGGAGAAGCAGAGGGTATTGGAAGCATATATAACTaGCCTCATCTATGTGTAAGAAGTAGAACAATGACT +
Preference number: 6 (lower is better)
Translates to: KGEAEGIGSIYN*PHLCVRSRTMT
Trigger: AGTCATTGTTCTACTTCTTACACATAGATGAGGCAAGTTATATATGCTTCCAATACCCTCTGCTTCTCCTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549335.5