RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ALDH1L1 (Homo sapiens)

Ensembl gene IDs: ENSG00000144908

Ensembl transcript IDs: ENST00000273450.7, ENST00000393431.6, ENST00000393434.7, ENST00000413612.5, ENST00000452905.6, ENST00000455064.6, ENST00000460368.5, ENST00000462808.1, ENST00000467370.5, ENST00000472186.5, ENST00000473607.5, ENST00000476245.5, ENST00000484724.5, ENST00000488356.5, ENST00000490367.5, ENST00000493803.5, ENST00000509952.5, ENST00000511283.2

Found 1311 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGTTGGGCTCCCACCTGTACATCAGCCGGCCCCGGTCCCGCGCACTaGTCTTCCCCCACCGTCCATTCTCAAAGGCATCCTTGGCTGCGG +
Preference number: 1 (lower is better)
Translates to: CWAPTCTSAGPGPAH*SSPTVHSQRHPWLR
Trigger: CCGCAGCCAAGGATGCCTTTGAGAATGGACGGTGGGGGAAGATCAGTGCGCGGGACCGGGGCCGGCTGATGTACAGGTGGGAGCCCAACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR CCA 90 bp TCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGACTaGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGGAG +
Preference number: 1 (lower is better)
Translates to: SLGGAHLTQPRAASD*TEGVQDADMVCRQE
Trigger: CTCCTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
3UTR CCA 90 bp TTCCCAAAGAGGATGAGTCCTGCTTTGGTGACCACCCCTGGCCGATaGGCTCCTGGGATGGGCAAAGCGTCTCCCTCGGGCACCAGGCCT +
Preference number: 1 (lower is better)
Translates to: FPKRMSPALVTTPGR*APGMGKASPSGTRP
Trigger: AGGCCTGGTGCCCGAGGGAGACGCTTTGCCCATCCCAGGAGCCCATCGGCCAGGGGTGGTCACCAAAGCAGGACTCATCCTCTTTGGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000493803.5
3UTR CCA 90 bp AGGGAAGTGCTTTGTCTGCCTGGGAGGCCCAGCCTGCGCCCACTTTaGAAGCATCCCTTGGCTTCCGCACCTCCTCACCTCCACCAGGCA +
Preference number: 1 (lower is better)
Translates to: REVLCLPGRPSLRPL*KHPLASAPPHLHQA
Trigger: TGCCTGGTGGAGGTGAGGAGGTGCGGAAGCCAAGGGATGCTTCCAAAGTGGGCGCAGGCTGGGCCTCCCAGGCAGACAAAGCACTTCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR CCA 90 bp AAGTCCCCTCCAGCCCAGGCTGGTGAGGGAAGTGCTTTGTCTGCCTaGGAGGCCCAGCCTGCGCCCACTTTGGAAGCATCCCTTGGCTTC +
Preference number: 1 (lower is better)
Translates to: KSPPAQAGEGSALSA*EAQPAPTLEASLGF
Trigger: GAAGCCAAGGGATGCTTCCAAAGTGGGCGCAGGCTGGGCCTCCCAGGCAGACAAAGCACTTCCCTCACCAGCCTGGGCTGGAGGGGACTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR TCA 90 bp TCTGTCCAGGCTCCCGGCACCTTGTCGTTCCCGCGGATCCAGTTGTaGATGGCCTCTGCCGGCTGGTCCCAGTTGATCTTGGCTGTCTCC +
Preference number: 1 (lower is better)
Translates to: SVQAPGTLSFPRIQL*MASAGWSQLILAVS
Trigger: GGAGACAGCCAAGATCAACTGGGACCAGCCGGCAGAGGCCATTCACAACTGGATCCGCGGGAACGACAAGGTGCCGGGAGCCTGGACAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000493803.5
3UTR GCA 90 bp CATGGTGATTCTGCGGCCCGTGGTCGGTGTCCCTGTCCAGCGGGTTaGCCACCTTCATCTTCCGCACCTCTTCTACCACTCTCCGCACGA +
Preference number: 1 (lower is better)
Translates to: HGDSAARGRCPCPAG*PPSSSAPLLPLSAR
Trigger: TCGTGCGGAGAGTGGTAGAAGAGGTGCGGAAGATGAAGGTGGGCAACCCGCTGGACAGGGACACCGACCACGGGCCGCAGAATCACCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR GCA 90 bp CTTCCCCCACCGTCCATTCTCAAAGGCATCCTTGGCTGCGGCCACTaGCTTGTCGACGTCGGTGACTTGGGCCAGGGATACCTGGCAGAT +
Preference number: 1 (lower is better)
Translates to: LPPPSILKGILGCGH*LVDVGDLGQGYLAD
Trigger: ATCTGCCAGGTATCCCTGGCCCAAGTCACCGACGTCGACAAGGCAGTGGCCGCAGCCAAGGATGCCTTTGAGAATGGACGGTGGGGGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR GCA 90 bp CGCACTGATCTTCCCCCACCGTCCATTCTCAAAGGCATCCTTGGCTaGGGCCACTGCCTTGTCGACGTCGGTGACTTGGGCCAGGGATAC +
Preference number: 1 (lower is better)
Translates to: RTDLPPPSILKGILG*GHCLVDVGDLGQGY
Trigger: GTATCCCTGGCCCAAGTCACCGACGTCGACAAGGCAGTGGCCGCAGCCAAGGATGCCTTTGAGAATGGACGGTGGGGGAAGATCAGTGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR CCA 90 bp AGAAGAACCCTGGCCGAGGGACCTGATTCCCGCCGCAGACCAGTGTaGCCCCTTCCTTCACGCCATGCTGGCAGTACTCCATCAGCTTCA +
Preference number: 1 (lower is better)
Translates to: RRTLAEGPDSRRRPV*PLPSRHAGSTPSAS
Trigger: TGAAGCTGATGGAGTACTGCCAGCATGGCGTGAAGGAAGGGGCCACACTGGTCTGCGGCGGGAATCAGGTCCCTCGGCCAGGGTTCTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR CCA 90 bp GTCATCATTCCCAAAGAGGATGAGTCCTGCTTTGGTGACCACCCCTaGCCGATGGGCTCCTGGGATGGGCAAAGCGTCTCCCTCGGGCAC +
Preference number: 1 (lower is better)
Translates to: VIIPKEDESCFGDHP*PMGSWDGQSVSLGH
Trigger: GTGCCCGAGGGAGACGCTTTGCCCATCCCAGGAGCCCATCGGCCAGGGGTGGTCACCAAAGCAGGACTCATCCTCTTTGGGAATGATGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000493803.5
3UTR CCA 90 bp CCCACCTCTGTGGAGCCTGTGAACCCGATTTTCCTCACATCAGGATaGTCTGAGAGTCTCTGGCCGACCAGGGAGCCAGATCCTGGGAGG +
Preference number: 1 (lower is better)
Translates to: PTSVEPVNPIFLTSG*SESLWPTREPDPGR
Trigger: CCTCCCAGGATCTGGCTCCCTGGTCGGCCAGAGACTCTCAGACCATCCTGATGTGAGGAAAATCGGGTTCACAGGCTCCACAGAGGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR CCA 90 bp AAGGCATCCTTGGCTGCGGCCACTGCCTTGTCGACGTCGGTGACTTaGGCCAGGGATACCTGGCAGATGACACTTCCATCGGTGGGATTG +
Preference number: 1 (lower is better)
Translates to: KASLAAATALSTSVT*ARDTWQMTLPSVGL
Trigger: CAATCCCACCGATGGAAGTGTCATCTGCCAGGTATCCCTGGCCCAAGTCACCGACGTCGACAAGGCAGTGGCCGCAGCCAAGGATGCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR TCA 90 bp CTCTGTGGAGCCTGTGAACCCGATTTTCCTCACATCAGGATGGTCTaGGAGTCTCTGGCCGACCAGGGAGCCAGATCCTGGGAGGACGTT +
Preference number: 1 (lower is better)
Translates to: LCGACEPDFPHIRMV*ESLADQGARSWEDV
Trigger: AACGTCCTCCCAGGATCTGGCTCCCTGGTCGGCCAGAGACTCTCAGACCATCCTGATGTGAGGAAAATCGGGTTCACAGGCTCCACAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR GCA 90 bp TCCCGGCACCTTGTCGTTCCCGCGGATCCAGTTGTGAATGGCCTCTaGCGGCTGGTCCCAGTTGATCTTGGCTGTCTCCTTCTTCTGAAT +
Preference number: 1 (lower is better)
Translates to: SRHLVVPADPVVNGL*RLVPVDLGCLLLLN
Trigger: ATTCAGAAGAAGGAGACAGCCAAGATCAACTGGGACCAGCCGGCAGAGGCCATTCACAACTGGATCCGCGGGAACGACAAGGTGCCGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000493803.5
3UTR TCA 90 bp CCACATCAGGCAAAGCCTGTCCTTTTGCACGCCACCGGGAGTACTTaGATACCGGCACTCCATCCTTCTCAGCTTCCAGACAGTGGCAGC +
Preference number: 1 (lower is better)
Translates to: PHQAKPVLLHATGST*IPALHPSQLPDSGS
Trigger: GCTGCCACTGTCTGGAAGCTGAGAAGGATGGAGTGCCGGTATTCAAGTACTCCCGGTGGCGTGCAAAAGGACAGGCTTTGCCTGATGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR GCA 90 bp CCGTGCCCTTACCATTTTGTCATCATTCCCAAAGAGGATGAGTCCTaGTTTGGTGACCACCCCTGGCCGATGGGCTCCTGGGATGGGCAA +
Preference number: 1 (lower is better)
Translates to: PCPYHFVIIPKEDES*FGDHPWPMGSWDGQ
Trigger: TTGCCCATCCCAGGAGCCCATCGGCCAGGGGTGGTCACCAAAGCAGGACTCATCCTCTTTGGGAATGATGACAAAATGGTAAGGGCACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493803.5
3UTR GCA 90 bp CTTCACCAGCAGCATTTTGTCATCATTCCCAAAGAGGATGAGTCCTaGTTTGGTGACCACCCCTGGCCGATGGGCTCCTGGGATGGGCAA +
Preference number: 1 (lower is better)
Translates to: LHQQHFVIIPKEDES*FGDHPWPMGSWDGQ
Trigger: TTGCCCATCCCAGGAGCCCATCGGCCAGGGGTGGTCACCAAAGCAGGACTCATCCTCTTTGGGAATGATGACAAAATGCTGCTGGTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR GCA 90 bp CGCAGTAACCAGCTCTGCCTCTGTCAGCTCAAGGACACTGCTGGCTaGCCCCTTAAAGAAGTTCGAGGCCAGGATCATTTTGCCATCCTC +
Preference number: 1 (lower is better)
Translates to: RSNQLCLCQLKDTAG*PLKEVRGQDHFAIL
Trigger: GAGGATGGCAAAATGATCCTGGCCTCGAACTTCTTTAAGGGGGCAGCCAGCAGTGTCCTTGAGCTGACAGAGGCAGAGCTGGTTACTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR GCA 90 bp GACAGGAGCATGGGTGGCTTTGAGCAGGCAAGTGACCCACAGCCGTaGCCTTACCATTTTGTCATCATTCCCAAAGAGGATGAGTCCTGC +
Preference number: 1 (lower is better)
Translates to: DRSMGGFEQASDPQP*PYHFVIIPKEDESC
Trigger: GCAGGACTCATCCTCTTTGGGAATGATGACAAAATGGTAAGGGCACGGCTGTGGGTCACTTGCCTGCTCAAAGCCACCCATGCTCCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493803.5
3UTR CCA 90 bp GAGTACTTGAATACCGGCACTCCATCCTTCTCAGCTTCCAGACAGTaGCAGCTGCTTCCTGCAGTCGCTGTCCCCAATAACTTTGGGCTC +
Preference number: 1 (lower is better)
Translates to: EYLNTGTPSFSASRQ*QLLPAVAVPNNFGL
Trigger: GAGCCCAAAGTTATTGGGGACAGCGACTGCAGGAAGCAGCTGCCACTGTCTGGAAGCTGAGAAGGATGGAGTGCCGGTATTCAAGTACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR GCA 90 bp CAAAGCCTGGTATTTTGCCACCACATCAGGCAAAGCCTGTCCTTTTaGACGCCACCGGGAGTACTTGAATACCGGCACTCCATCCTTCTC +
Preference number: 1 (lower is better)
Translates to: QSLVFCHHIRQSLSF*TPPGVLEYRHSILL
Trigger: GAGAAGGATGGAGTGCCGGTATTCAAGTACTCCCGGTGGCGTGCAAAAGGACAGGCTTTGCCTGATGTGGTGGCAAAATACCAGGCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR CCA 90 bp TCTTCCGCACCTCTTCTACCACTCTCCGCACGAACTCATCATGAATaGAGTCCTCCACAAAGAGTCGGCCTGCTGCAATGCAATTCTCTC +
Preference number: 1 (lower is better)
Translates to: SSAPLLPLSARTHHE*SPPQRVGLLQCNSL
Trigger: GAGAGAATTGCATTGCAGCAGGCCGACTCTTTGTGGAGGACTCCATTCATGATGAGTTCGTGCGGAGAGTGGTAGAAGAGGTGCGGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR TCA 90 bp AAGGAACACTTCTTTGTATTCAGTTCTCTGTTAGAGCCTCTGGTGTaGTGTTTGGGCCCTGACTGGACTGGCTCTCCTCTCCGGTCTCCT +
Preference number: 1 (lower is better)
Translates to: KEHFFVFSSLLEPLV*CLGPDWTGSPLRSP
Trigger: AGGAGACCGGAGAGGAGAGCCAGTCCAGTCAGGGCCCAAACATCACACCAGAGGCTCTAACAGAGAACTGAATACAAAGAAGTGTTCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000511283.2
3UTR TCA 90 bp TTCTTCTCACAAAGACCTTTCTTCAGTATTCGAAGGTCACTGTCTTaGCCCGCAGGTACTCGTTCAGAGCCGCCTCTCCTAGATCTTTGC +
Preference number: 1 (lower is better)
Translates to: FFSQRPFFSIRRSLS*PAGTRSEPPLLDLC
Trigger: GCAAAGATCTAGGAGAGGCGGCTCTGAACGAGTACCTGCGGGTCAAGACAGTGACCTTCGAATACTGAAGAAAGGTCTTTGTGAGAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR-3UTR TCA 90 bp GTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGGGCCAAGGGCTGCTTCTaGCTGGACAGAGGGCGTCCA +
Preference number: 2 (lower is better)
Translates to: VGGAVHPGSRGRGPQPRGAKGCF*LDRGRP
Trigger: TGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGC...CCCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
3UTR CAA 90 bp GCCACTGCCCAGAAGCTGATGGTGGCAGTGGCTGGCAGGTACATGTaGGGCTCCCACCTGTACATCAGCCGGCCCCGGTCCCGCGCACTG +
Preference number: 2 (lower is better)
Translates to: ATAQKLMVAVAGRYM*GSHLYISRPRSRAL
Trigger: CAGTGCGCGGGACCGGGGCCGGCTGATGTACAGGTGGGAGCCCAACATGTACCTGCCAGCCACTGCCACCATCAGCTTCTGGGCAGTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR-3UTR CCA 90 bp GGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGTGGTCTGAGAGTCTCTaGCCGACCAGGGAGCCAGAT +
Preference number: 2 (lower is better)
Translates to: GGRCCAPRLKREGAPATRWSESL*PTREPD
Trigger: ATCTGGCTCCCTGGTCGGCCAGAGACTCTCAGACCA...CCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR-3UTR CCA 90 bp GTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGGCCAGGCCAAATTCCGTaGCATTGGCCCGAGACAGCA +
Preference number: 2 (lower is better)
Translates to: VGGAVHPGSRGRGPQPRGPGQIP*HWPETA
Trigger: TGCTGTCTCGGGCCAATGCCACGGAATTTGGCCTGG...CCCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR-3UTR CCA 90 bp GTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGGTCCAAGATGCAGACATaGTGTGCAGGCAGGAGGGCT +
Preference number: 2 (lower is better)
Translates to: VGGAVHPGSRGRGPQPRGSKMQT*CAGRRA
Trigger: AGCCCTCCTGCCTGCACACCATGTCTGCATCTTGGA...CCCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
3UTR CAA 90 bp GAGGGAAGTGCTTTGTCTGCCTGGGAGGCCCAGCCTGCGCCCACTTaGGAAGCATCCCTTGGCTTCCGCACCTCCTCACCTCCACCAGGC +
Preference number: 2 (lower is better)
Translates to: EGSALSAWEAQPAPT*EASLGFRTSSPPPG
Trigger: GCCTGGTGGAGGTGAGGAGGTGCGGAAGCCAAGGGATGCTTCCAAAGTGGGCGCAGGCTGGGCCTCCCAGGCAGACAAAGCACTTCCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR CAA 90 bp GCAGGAGCTAAGTCCCCTCCAGCCCAGGCTGGTGAGGGAAGTGCTTaGTCTGCCTGGGAGGCCCAGCCTGCGCCCACTTTGGAAGCATCC +
Preference number: 2 (lower is better)
Translates to: AGAKSPPAQAGEGSA*SAWEAQPAPTLEAS
Trigger: GGATGCTTCCAAAGTGGGCGCAGGCTGGGCCTCCCAGGCAGACAAAGCACTTCCCTCACCAGCCTGGGCTGGAGGGGACTTAGCTCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR-3UTR TCA 90 bp GGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGCAAATCCAGACTGTTTaGATCCTCCGAAGGGAGCGG +
Preference number: 2 (lower is better)
Translates to: GGRCCAPRLKREGAPATRQIQTV*ILRRER
Trigger: CCGCTCCCTTCGGAGGATTCAAACAGTCTGGATTTG...CCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR-3UTR GCA 90 bp GTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGGGACAAACACAGTGCCTaGCTGGAGCTTGTCACTGAC +
Preference number: 2 (lower is better)
Translates to: VGGAVHPGSRGRGPQPRGDKHSA*LELVTD
Trigger: GTCAGTGACAAGCTCCAGGCAGGCACTGTGTTTGTC...CCCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR-3UTR GCA 90 bp GGCTGCGGCCACTGCCTTGTCGACGTCGGTGACTTGGGCCAGGGATACCTGGCAAGCGGTTGTACAGCGTaGTCACGGTGTCGTCCGGGA +
Preference number: 2 (lower is better)
Translates to: GCGHCLVDVGDLGQGYLASGCTA*SRCRPG
Trigger: TCCCGGACGACACCGTGAGCACGCTGTACAACCGCT...TGCCAGGTATCCCTGGCCCAAGTCACCGACGTCGACAAGGCAGTGGCCGCAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR CAA 90 bp TCCCGCGCACTGATCTTCCCCCACCGTCCATTCTCAAAGGCATCCTaGGCTGCGGCCACTGCCTTGTCGACGTCGGTGACTTGGGCCAGG +
Preference number: 2 (lower is better)
Translates to: SRALIFPHRPFSKAS*AAATALSTSVTWAR
Trigger: CCTGGCCCAAGTCACCGACGTCGACAAGGCAGTGGCCGCAGCCAAGGATGCCTTTGAGAATGGACGGTGGGGGAAGATCAGTGCGCGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR-3UTR TCA 90 bp GGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCGCCAAGGGCTGCTTCTaGCTGGACAGAGGGCGTCCA +
Preference number: 2 (lower is better)
Translates to: GLLLTGQRASKMQTWCAGAKGCF*LDRGRP
Trigger: TGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGC...GCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
3UTR-3UTR TCA 90 bp CCTGAGTCCAAGGACAGGAGCATGGGTGGCTTTGAGCAGGCAAGTGACCCACAGCCGCGGATCCAGTTGTaGATGGCCTCTGCCGGCTGG +
Preference number: 2 (lower is better)
Translates to: PESKDRSMGGFEQASDPQPRIQL*MASAGW
Trigger: CCAGCCGGCAGAGGCCATTCACAACTGGATCCGCGG...CTGTGGGTCACTTGCCTGCTCAAAGCCACCCATGCTCCTGTCCTTGGACTCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493803.5
3UTR-3UTR GCA 90 bp AGTCTCTGGCCGACCAGGGAGCCAGATCCTGGGAGGACGTTAACCACACCTTTGCCCCCAGGTGGGAGGTaGTGTGCACCCAGGCTCAAG +
Preference number: 2 (lower is better)
Translates to: SLWPTREPDPGRTLTTPLPPGGR*CAPRLK
Trigger: CTTGAGCCTGGGTGCACAGCACCTCCCACCTGGGGG...CAAAGGTGTGGTTAACGTCCTCCCAGGATCTGGCTCCCTGGTCGGCCAGAGACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR-3UTR GCA 90 bp CTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGGCCCCCAGGTGGGAGGTaGTGTGCACCCAGGCTCAAG +
Preference number: 2 (lower is better)
Translates to: LLLTGQRASKMQTWCAGRPPGGR*CAPRLK
Trigger: CTTGAGCCTGGGTGCACAGCACCTCCCACCTGGGGG...CCTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
3UTR-3UTR GCA 90 bp TCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTCCCCCAGGTGGGAGGTaGTGTGCACCCAGGCTCAAG +
Preference number: 2 (lower is better)
Translates to: SEALFSLGGAHLTQPRAAPPGGR*CAPRLK
Trigger: CTTGAGCCTGGGTGCACAGCACCTCCCACCTGGGGG...AGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
3UTR-3UTR CCA 90 bp GCCAAATTCCGTGGCATTGGCCCGAGACAGCACGGCATCCAAGTCCCCATCAGCCGCCGCAGACCAGTGTaGCCCCTTCCTTCACGCCAT +
Preference number: 2 (lower is better)
Translates to: AKFRGIGPRQHGIQVPISRRRPV*PLPSRH
Trigger: ATGGCGTGAAGGAAGGGGCCACACTGGTCTGCGGCG...GCTGATGGGGACTTGGATGCCGTGCTGTCTCGGGCCAATGCCACGGAATTTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR CAA 90 bp CCCCACCGTCCATTCTCAAAGGCATCCTTGGCTGCGGCCACTGCCTaGTCGACGTCGGTGACTTGGGCCAGGGATACCTGGCAGATGACA +
Preference number: 2 (lower is better)
Translates to: PHRPFSKASLAAATA*STSVTWARDTWQMT
Trigger: TGTCATCTGCCAGGTATCCCTGGCCCAAGTCACCGACGTCGACAAGGCAGTGGCCGCAGCCAAGGATGCCTTTGAGAATGGACGGTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR-3UTR TCA 90 bp GCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGGCCAAGGGCTGCTTCTaGCTGGACAGAGGGCGTCCA +
Preference number: 2 (lower is better)
Translates to: AASDWTEGVQDADMVCRQAKGCF*LDRGRP
Trigger: TGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGC...CTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
3UTR-3UTR TCA 90 bp GCCACTGCCCAGAAGCTGATGGTGGCAGTGGCTGGCAGGTACATGTTGGGCTCCGTGATGTTTGGGCCCTaGCTGGACTGGCTCTCCTCT +
Preference number: 2 (lower is better)
Translates to: ATAQKLMVAVAGRYMLGSVMFGP*LDWLSS
Trigger: AGAGGAGAGCCAGTCCAGTCAGGGCCCAAACATCAC...GGAGCCCAACATGTACCTGCCAGCCACTGCCACCATCAGCTTCTGGGCAGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR-3UTR TCA 90 bp ACACTTCCATCGGTGGGATTGATGGTCTCAGAGGTCTTGGCGCCCTCGGCATCCAGAAGGGCAGGACGTTaGGCTCGGCCCCCAAAGCCT +
Preference number: 2 (lower is better)
Translates to: TLPSVGLMVSEVLAPSASRRAGR*ARPPKP
Trigger: AGGCTTTGGGGGCCGAGCTCAACGTCCTGCCCTTCT...GGATGCCGAGGGCGCCAAGACCTCTGAGACCATCAATCCCACCGATGGAAGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR-3UTR GCA 90 bp TCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTCCCCCAGGTGGGAGGTaGTGTGCACCCAGGCTCAAG +
Preference number: 2 (lower is better)
Translates to: SSEALFSLGGAHLTQPRAPPGGR*CAPRLK
Trigger: CTTGAGCCTGGGTGCACAGCACCTCCCACCTGGGGG...AGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
3UTR-3UTR GCA 90 bp CGGTGTCCCTGTCCAGCGGGTTGCCCACCTTCATCTTCCGCACCTCTTCTACCACCCTGTCCAGCGGGTTaGCCACCTTCATCTTCCGCA +
Preference number: 2 (lower is better)
Translates to: RCPCPAGCPPSSSAPLLPPCPAG*PPSSSA
Trigger: TGCGGAAGATGAAGGTGGGCAACCCGCTGGACAGGG...TGGTAGAAGAGGTGCGGAAGATGAAGGTGGGCAACCCGCTGGACAGGGACACCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR-3UTR CCA 90 bp GTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGGCGAACTCATCATGAATaGAGTCCTCCACAAAGAGTC +
Preference number: 2 (lower is better)
Translates to: VGGAVHPGSRGRGPQPRGRTHHE*SPPQRV
Trigger: GACTCTTTGTGGAGGACTCCATTCATGATGAGTTCG...CCCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR-3UTR CCA 90 bp GGCCTGAGTCCAAGGACAGGAGCATGGGTGGCTTTGAGCAGGCAAGTGACCCACGGATCCAGTTGTGAATaGCCTCTGCCGGCTGGTCCC +
Preference number: 2 (lower is better)
Translates to: GLSPRTGAWVALSRQVTHGSSCE*PLPAGP
Trigger: GGGACCAGCCGGCAGAGGCCATTCACAACTGGATCC...GTGGGTCACTTGCCTGCTCAAAGCCACCCATGCTCCTGTCCTTGGACTCAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493803.5
3UTR-3UTR CCA 90 bp TCCATTCTCAAAGGCATCCTTGGCTGCGGCCACTGCCTTGTCGACGTCGGTGACTGGCCGATGGGCTCCTaGGATGGGCAAAGCGTCTCC +
Preference number: 2 (lower is better)
Translates to: SILKGILGCGHCLVDVGDWPMGS*DGQSVS
Trigger: GGAGACGCTTTGCCCATCCCAGGAGCCCATCGGCCA...GTCACCGACGTCGACAAGGCAGTGGCCGCAGCCAAGGATGCCTTTGAGAATGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR-3UTR CCA 90 bp TCCATTCTCAAAGGCATCCTTGGCTGCGGCCACTGCCTTGTCGACGTCGGTGACACCACCCCTGGCCGATaGGCTCCTGGGATGGGCAAA +
Preference number: 2 (lower is better)
Translates to: SILKGILGCGHCLVDVGDTTPGR*APGMGK
Trigger: TTTGCCCATCCCAGGAGCCCATCGGCCAGGGGTGGT...GTCACCGACGTCGACAAGGCAGTGGCCGCAGCCAAGGATGCCTTTGAGAATGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR-3UTR CCA 90 bp CGTCCATTCTCAAAGGCATCCTTGGCTGCGGCCACTGCCTTGTCGACGTCGGTGTGTTTGGGCCCTGACTaGACTGGCTCTCCTCTCCGG +
Preference number: 2 (lower is better)
Translates to: RPFSKASLAAATALSTSVCLGPD*TGSPLR
Trigger: CCGGAGAGGAGAGCCAGTCCAGTCAGGGCCCAAACA...CACCGACGTCGACAAGGCAGTGGCCGCAGCCAAGGATGCCTTTGAGAATGGACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR-3UTR TCA 90 bp GTGCCTGCCTGGAGCTTGTCACTGACATACAGGGCCTTGTTGATGTCCCTGGTGACAAGGTGGGCATGGTaGTTCTGCGGCCCGTGGTCG +
Preference number: 2 (lower is better)
Translates to: VPAWSLSLTYRALLMSLVTRWAW*FCGPWS
Trigger: CGACCACGGGCCGCAGAATCACCATGCCCACCTTGT...CACCAGGGACATCAACAAGGCCCTGTATGTCAGTGACAAGCTCCAGGCAGGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR-3UTR TCA 90 bp GGTGACTTGGGCCAGGGATACCTGGCAGATGACACTTCCATCGGTGGGATTGATCCGCGGATCCAGTTGTaGATGGCCTCTGCCGGCTGG +
Preference number: 2 (lower is better)
Translates to: GDLGQGYLADDTSIGGIDPRIQL*MASAGW
Trigger: CCAGCCGGCAGAGGCCATTCACAACTGGATCCGCGG...ATCAATCCCACCGATGGAAGTGTCATCTGCCAGGTATCCCTGGCCCAAGTCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR-3UTR GCA 90 bp CCCGTGGTCGGTGTCCCTGTCCAGCGGGTTGCCCACCTTCATCTTCCGCACCTCCACAAAGAGTCGGCCTaGTGCAATGCAATTCTCTCC +
Preference number: 2 (lower is better)
Translates to: PVVGVPVQRVAHLHLPHLHKESA*CNAILS
Trigger: GGAGAGAATTGCATTGCAGCAGGCCGACTCTTTGTG...GAGGTGCGGAAGATGAAGGTGGGCAACCCGCTGGACAGGGACACCGACCACGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR-3UTR CCA 90 bp GGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCCAGGGAGCCAGATCCTaGGAGGACGTTAACCACACC +
Preference number: 2 (lower is better)
Translates to: GLLLTGQRASKMQTWCAGQGARS*EDVNHT
Trigger: GGTGTGGTTAACGTCCTCCCAGGATCTGGCTCCCTG...GCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR-3UTR CCA 90 bp CGGTGTCCCTGTCCAGCGGGTTGCCCACCTTCATCTTCCGCACCTCTTCTACCATGGTCTGAGAGTCTCTaGCCGACCAGGGAGCCAGAT +
Preference number: 2 (lower is better)
Translates to: RCPCPAGCPPSSSAPLLPWSESL*PTREPD
Trigger: ATCTGGCTCCCTGGTCGGCCAGAGACTCTCAGACCA...TGGTAGAAGAGGTGCGGAAGATGAAGGTGGGCAACCCGCTGGACAGGGACACCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR-3UTR CCA 90 bp GCCAGGAAGGGTAGGGAGCCCAGCTTTCCCAGAACAGAGAAGTGGGTAAACTGCCAGGCTGAGGGAGTCTaGGGGCTTTGCCCTCAGCGA +
Preference number: 2 (lower is better)
Translates to: ARKGREPSFPRTEKWVNCQAEGV*GLCPQR
Trigger: TCGCTGAGGGCAAAGCCCCCAGACTCCCTCAGCCTG...GCAGTTTACCCACTTCTCTGTTCTGGGAAAGCTGGGCTCCCTACCCTTCCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493803.5
3UTR-3UTR CCA 90 bp CAGTTTCTGTTCACAGGCCTCTGTCCAGGCTCCCGGCACCTTGTCGTTCCCGCGGAATCCCCTCATAGGTaGCTCCTTCCTCAGGCTGAG +
Preference number: 2 (lower is better)
Translates to: QFLFTGLCPGSRHLVVPAESPHR*LLPQAE
Trigger: CTCAGCCTGAGGAAGGAGCCACCTATGAGGGGATTC...CGCGGGAACGACAAGGTGCCGGGAGCCTGGACAGAGGCCTGTGAACAGAAACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000493803.5
3UTR-3UTR CCA 90 bp CTGATGGTGGCAGTGGCTGGCAGGTACATGTTGGGCTCCCACCTGTACATCAGCCCCCCAATGAAGAGCTaGTGGGGCATGCGGACAGTG +
Preference number: 2 (lower is better)
Translates to: LMVAVAGRYMLGSHLYISPPMKS*WGMRTV
Trigger: CACTGTCCGCATGCCCCACCAGCTCTTCATTGGGGG...GCTGATGTACAGGTGGGAGCCCAACATGTACCTGCCAGCCACTGCCACCATCAG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR-3UTR CCA 90 bp GCCACTGCCCAGAAGCTGATGGTGGCAGTGGCTGGCAGGTACATGTTGGGCTCCTCTCAAAGGCATCCTTaGCTGCGGCCACTGCCTTGT +
Preference number: 2 (lower is better)
Translates to: ATAQKLMVAVAGRYMLGSSQRHP*LRPLPC
Trigger: ACAAGGCAGTGGCCGCAGCCAAGGATGCCTTTGAGA...GGAGCCCAACATGTACCTGCCAGCCACTGCCACCATCAGCTTCTGGGCAGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR CAA 90 bp AAAGGCATCCTTGGCTGCGGCCACTGCCTTGTCGACGTCGGTGACTaGGGCCAGGGATACCTGGCAGATGACACTTCCATCGGTGGGATT +
Preference number: 2 (lower is better)
Translates to: KGILGCGHCLVDVGD*GQGYLADDTSIGGI
Trigger: AATCCCACCGATGGAAGTGTCATCTGCCAGGTATCCCTGGCCCAAGTCACCGACGTCGACAAGGCAGTGGCCGCAGCCAAGGATGCCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR-3UTR TCA 90 bp CACGGCATCCAAGTCCCCATCAGCAAACCGAGAGATGATCATGACAGGCCCGAAGCCAAGGGCTGCTTCTaGCTGGACAGAGGGCGTCCA +
Preference number: 2 (lower is better)
Translates to: HGIQVPISKPRDDHDRPEAKGCF*LDRGRP
Trigger: TGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGC...TTCGGGCCTGTCATGATCATCTCTCGGTTTGCTGATGGGGACTTGGATGCCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR-3UTR TCA 90 bp ATTCCCGCCGCAGACCAGTGTGGCCCCTTCCTTCACGCCATGCTGGCAGTACTCCTCATCCCCTTTTCATaGTGTGCTTGCCCACCTCTG +
Preference number: 2 (lower is better)
Translates to: IPAADQCGPFLHAMLAVLLIPFS*CACPPL
Trigger: CAGAGGTGGGCAAGCACATCATGAAAAGGGGATGAG...GAGTACTGCCAGCATGGCGTGAAGGAAGGGGCCACACTGGTCTGCGGCGGGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393431.6
3UTR-3UTR TCA 90 bp ACAAACACAGTGCCTGCCTGGAGCTTGTCACTGACATACAGGGCCTTGTTGATGCCTGGCCGAGGGACCTaGTTCCCGCCGCAGACCAGT +
Preference number: 2 (lower is better)
Translates to: TNTVPAWSLSLTYRALLMPGRGT*FPPQTS
Trigger: ACTGGTCTGCGGCGGGAATCAGGTCCCTCGGCCAGG...CATCAACAAGGCCCTGTATGTCAGTGACAAGCTCCAGGCAGGCACTGTGTTTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR-3UTR TCA 90 bp TTCCCAAAGAGGATGAGTCCTGCTTTGGTGACCACCCCTGGCCGATGGGCTCCTGCCACCGGGAGTACTTaGATACCGGCACTCCATCCT +
Preference number: 2 (lower is better)
Translates to: FPKRMSPALVTTPGRWAPATGST*IPALHP
Trigger: AGGATGGAGTGCCGGTATTCAAGTACTCCCGGTGGC...AGGAGCCCATCGGCCAGGGGTGGTCACCAAAGCAGGACTCATCCTCTTTGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR-3UTR GCA 90 bp GGCCCGAAGGACTCCTCCTTGGCTATGAACATGTGGTCTTCCACGTCTGTGAAACCCCCAGGTGGGAGGTaGTGTGCACCCAGGCTCAAG +
Preference number: 2 (lower is better)
Translates to: GPKDSSLAMNMWSSTSVKPPGGR*CAPRLK
Trigger: CTTGAGCCTGGGTGCACAGCACCTCCCACCTGGGGG...TTTCACAGACGTGGAAGACCACATGTTCATAGCCAAGGAGGAGTCCTTCGGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR-3UTR GCA 90 bp TCATTCCCAAAGAGGATGAGTCCTGCTTTGGTGACCACCCCTGGCCGATGGGCTGGAGTCTGGGGGCTTTaGCCTCAGCGATCAGCCTCA +
Preference number: 2 (lower is better)
Translates to: SFPKRMSPALVTTPGRWAGVWGL*PQRSAS
Trigger: TGAGGCTGATCGCTGAGGGCAAAGCCCCCAGACTCC...AGCCCATCGGCCAGGGGTGGTCACCAAAGCAGGACTCATCCTCTTTGGGAATGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000493803.5
3UTR-3UTR CCA 90 bp GGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGGGCTGCTTCTGACTaGACAGAGGGCGTCCAAGAT +
Preference number: 2 (lower is better)
Translates to: GLLLTGQRASKMQTWCAGRAASD*TEGVQD
Trigger: ATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCT...GCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
3UTR-3UTR CCA 90 bp CGCAGACCAGTGTGGCCCCTTCCTTCACGCCATGCTGGCAGTACTCCATCAGCTCTCAAAGAAGAACCCTaGCCGAGGGACCTGATTCCC +
Preference number: 2 (lower is better)
Translates to: RRPVWPLPSRHAGSTPSALKEEP*PRDLIP
Trigger: GGGAATCAGGTCCCTCGGCCAGGGTTCTTCTTTGAG...AGCTGATGGAGTACTGCCAGCATGGCGTGAAGGAAGGGGCCACACTGGTCTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR-3UTR CCA 90 bp GGTGACTTGGGCCAGGGATACCTGGCAGATGACACTTCCATCGGTGGGATTGATCAGGCTGAGGGAGTCTaGGGGCTTTGCCCTCAGCGA +
Preference number: 2 (lower is better)
Translates to: GDLGQGYLADDTSIGGIDQAEGV*GLCPQR
Trigger: TCGCTGAGGGCAAAGCCCCCAGACTCCCTCAGCCTG...ATCAATCCCACCGATGGAAGTGTCATCTGCCAGGTATCCCTGGCCCAAGTCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR-3UTR CCA 90 bp CCTTCTCAGCTTCCAGACAGTGGCAGCTGCTTCCTGCAGTCGCTGTCCCCAATATGTTTGGGCCCTGACTaGACTGGCTCTCCTCTCCGG +
Preference number: 2 (lower is better)
Translates to: PSQLPDSGSCFLQSLSPICLGPD*TGSPLR
Trigger: CCGGAGAGGAGAGCCAGTCCAGTCAGGGCCCAAACA...TATTGGGGACAGCGACTGCAGGAAGCAGCTGCCACTGTCTGGAAGCTGAGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000511283.2
3UTR CAA 90 bp ATGTCCCTGGTGAAGACACCAGAAGCCAGGCCAAATTCCGTGGCATaGGCCCGAGACAGCACGGCATCCAAGTCCCCATCAGCAAACCGA +
Preference number: 2 (lower is better)
Translates to: MSLVKTPEARPNSVA*ARDSTASKSPSANR
Trigger: TCGGTTTGCTGATGGGGACTTGGATGCCGTGCTGTCTCGGGCCAATGCCACGGAATTTGGCCTGGCTTCTGGTGTCTTCACCAGGGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR-3UTR TCA 90 bp TCACAGGCCTCTGTCCAGGCTCCCGGCACCTTGTCGTTCCCGCGGATCCAGTTGCCTTTCTTATCTCCGTaGATGAGGGTCCAGTTGATG +
Preference number: 2 (lower is better)
Translates to: SQASVQAPGTLSFPRIQLPFLSP*MRVQLM
Trigger: CATCAACTGGACCCTCATTCACGGAGATAAGAAAGG...CAACTGGATCCGCGGGAACGACAAGGTGCCGGGAGCCTGGACAGAGGCCTGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR-3UTR GCA 90 bp GGCAGTACTCCATCAGCTTCACAAGGTGGGCATGGTGATTCTGCGGCCCGTGGTCCTTCCTTCACGCCATaGTGGCAGTACTCCATCAGC +
Preference number: 2 (lower is better)
Translates to: GSTPSASQGGHGDSAARGPSFTP*WQYSIS
Trigger: GCTGATGGAGTACTGCCAGCATGGCGTGAAGGAAGG...ACCACGGGCCGCAGAATCACCATGCCCACCTTGTGAAGCTGATGGAGTACTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR-3UTR GCA 90 bp GGACACCCTGTGCTCAGGACCAGCCGGGTGGTCAGGGACAAATCAGGGTCAGTGAGTGACCCACAGCCGTaGCCTTACCATTTTGTCATC +
Preference number: 2 (lower is better)
Translates to: GHPVLRTSRVVRDKSGSVSDPQP*PYHFVI
Trigger: GATGACAAAATGGTAAGGGCACGGCTGTGGGTCACT...CACTGACCCTGATTTGTCCCTGACCACCCGGCTGGTCCTGAGCACAGGGTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493803.5
3UTR-3UTR CCA 90 bp TTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTCCAAGATGCAGACATaGTGTGCAGGCAGGAGGGCT +
Preference number: 2 (lower is better)
Translates to: FRSFILPGRGTPHPAKGCSKMQT*CAGRRA
Trigger: AGCCCTCCTGCCTGCACACCATGTCTGCATCTTGGA...GCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
3UTR-3UTR CCA 90 bp GCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGTCCAAGATGCAGACATaGTGTGCAGGCAGGAGGGCT +
Preference number: 2 (lower is better)
Translates to: AASDWTEGVQDADMVCRQSKMQT*CAGRRA
Trigger: AGCCCTCCTGCCTGCACACCATGTCTGCATCTTGGA...CTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
3UTR-3UTR CCA 90 bp GCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGAGGGCTGCTTCTGACTaGACAGAGGGCGTCCAAGAT +
Preference number: 2 (lower is better)
Translates to: AASDWTEGVQDADMVCRQRAASD*TEGVQD
Trigger: ATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCT...CTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
3UTR-3UTR CCA 90 bp GGCAGTACTCCATCAGCTTCACAAGGTGGGCATGGTGATTCTGCGGCCCGTGGTAAGCTTTATTCTCCCTaGGAGGGGCACACCTCACCC +
Preference number: 2 (lower is better)
Translates to: GSTPSASQGGHGDSAARGKLYSP*EGHTSP
Trigger: GGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTT...ACCACGGGCCGCAGAATCACCATGCCCACCTTGTGAAGCTGATGGAGTACTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR-3UTR CCA 90 bp GTGCCTGCCTGGAGCTTGTCACTGACATACAGGGCCTTGTTGATGTCCCTGGTGCAGGGAGCCAGATCCTaGGAGGACGTTAACCACACC +
Preference number: 2 (lower is better)
Translates to: VPAWSLSLTYRALLMSLVQGARS*EDVNHT
Trigger: GGTGTGGTTAACGTCCTCCCAGGATCTGGCTCCCTG...CACCAGGGACATCAACAAGGCCCTGTATGTCAGTGACAAGCTCCAGGCAGGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR CAA 90 bp GCCCTTACCATTTTGTCATCATTCCCAAAGAGGATGAGTCCTGCTTaGGTGACCACCCCTGGCCGATGGGCTCCTGGGATGGGCAAAGCG +
Preference number: 2 (lower is better)
Translates to: ALTILSSFPKRMSPA*VTTPGRWAPGMGKA
Trigger: CGCTTTGCCCATCCCAGGAGCCCATCGGCCAGGGGTGGTCACCAAAGCAGGACTCATCCTCTTTGGGAATGATGACAAAATGGTAAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493803.5
3UTR CAA 90 bp ACCAGCAGCATTTTGTCATCATTCCCAAAGAGGATGAGTCCTGCTTaGGTGACCACCCCTGGCCGATGGGCTCCTGGGATGGGCAAAGCG +
Preference number: 2 (lower is better)
Translates to: TSSILSSFPKRMSPA*VTTPGRWAPGMGKA
Trigger: CGCTTTGCCCATCCCAGGAGCCCATCGGCCAGGGGTGGTCACCAAAGCAGGACTCATCCTCTTTGGGAATGATGACAAAATGCTGCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR CAA 90 bp GCCCCTGACTTGAAGAAATCAGTGGAGTCTTCAACCTCCAGGACTTaGGGGAGGATCCGCTGCCAAACACTCCGCACAGCCTCCGCAGTA +
Preference number: 2 (lower is better)
Translates to: APDLKKSVESSTSRT*GRIRCQTLRTASAV
Trigger: TACTGCGGAGGCTGTGCGGAGTGTTTGGCAGCGGATCCTCCCCAAAGTCCTGGAGGTTGAAGACTCCACTGATTTCTTCAAGTCAGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR-3UTR TCA 90 bp GGTTGCCCACCTTCATCTTCCGCACCTCTTCTACCACTCTCCGCACGAACTCATGTGAGTGGGGTCACCTaGGCAGGCTTGATCACCACT +
Preference number: 2 (lower is better)
Translates to: GCPPSSSAPLLPLSARTHVSGVT*AGLITT
Trigger: AGTGGTGATCAAGCCTGCTCAGGTGACCCCACTCAC...ATGAGTTCGTGCGGAGAGTGGTAGAAGAGGTGCGGAAGATGAAGGTGGGCAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR-3UTR TCA 90 bp CCCAATGAAGAGCTGGTGGGGCATGCGGACAGTGCGCTTGTTCACTGCCATTTCTTAGAGCCTCTGGTGTaGTGTTTGGGCCCTGACTGG +
Preference number: 2 (lower is better)
Translates to: PNEELVGHADSALVHCHFLEPLV*CLGPDW
Trigger: CCAGTCAGGGCCCAAACATCACACCAGAGGCTCTAA...GAAATGGCAGTGAACAAGCGCACTGTCCGCATGCCCCACCAGCTCTTCATTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR-3UTR GCA 90 bp GCCAGGAAGGGTAGGGAGCCCAGCTTTCCCAGAACAGAGAAGTGGGTAAACTGCGTTGTGAATGGCCTCTaGCGGCTGGTCCCAGTTGAT +
Preference number: 2 (lower is better)
Translates to: ARKGREPSFPRTEKWVNCVVNGL*RLVPVD
Trigger: ATCAACTGGGACCAGCCGGCAGAGGCCATTCACAAC...GCAGTTTACCCACTTCTCTGTTCTGGGAAAGCTGGGCTCCCTACCCTTCCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493803.5
3UTR-3UTR GCA 90 bp AGTCCAAGGACAGGAGCATGGGTGGCTTTGAGCAGGCAAGTGACCCACAGCCGTAAAGAGGATGAGTCCTaGTTTGGTGACCACCCCTGG +
Preference number: 2 (lower is better)
Translates to: SPRTGAWVALSRQVTHSRKEDES*FGDHPW
Trigger: CCAGGGGTGGTCACCAAAGCAGGACTCATCCTCTTT...ACGGCTGTGGGTCACTTGCCTGCTCAAAGCCACCCATGCTCCTGTCCTTGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493803.5
3UTR-3UTR CCA 90 bp AATGGCCTCTGCCGGCTGGTCCCAGTTGATCTTGGCTGTCTCCTTCTTCTGAATTTTGGTGACCACCCCTaGCCGATGGGCTCCTGGGAT +
Preference number: 2 (lower is better)
Translates to: NGLCRLVPVDLGCLLLLNFGDHP*PMGSWD
Trigger: ATCCCAGGAGCCCATCGGCCAGGGGTGGTCACCAAA...ATTCAGAAGAAGGAGACAGCCAAGATCAACTGGGACCAGCCGGCAGAGGCCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000493803.5
3UTR-3UTR CCA 90 bp CCTTTGATGCCTTCAGGGAAGAGGAAGCGGTTGTACAGCGTGCTCACGGTGTCGTCAGCTTCCAGACAGTaGCAGCTGCTTCCTGCAGTC +
Preference number: 2 (lower is better)
Translates to: PLMPSGKRKRLYSVLTVSSASRQ*QLLPAV
Trigger: GACTGCAGGAAGCAGCTGCCACTGTCTGGAAGCTGA...CGACACCGTGAGCACGCTGTACAACCGCTTCCTCTTCCCTGAAGGCATCAAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR CAA 90 bp CCAGACTGTTTGAATCCTCCGAAGGGAGCGGCCACGTCGGTCTTGTaGTACGTGTTGACAAACACAGTGCCTGCCTGGAGCTTGTCACTG +
Preference number: 2 (lower is better)
Translates to: PDCLNPPKGAATSVL*YVLTNTVPAWSLSL
Trigger: CAGTGACAAGCTCCAGGCAGGCACTGTGTTTGTCAACACGTACAACAAGACCGACGTGGCCGCTCCCTTCGGAGGATTCAAACAGTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR CAA 90 bp ACCACATCAGGCAAAGCCTGTCCTTTTGCACGCCACCGGGAGTACTaGAATACCGGCACTCCATCCTTCTCAGCTTCCAGACAGTGGCAG +
Preference number: 2 (lower is better)
Translates to: TTSGKACPFARHREY*NTGTPSFSASRQWQ
Trigger: CTGCCACTGTCTGGAAGCTGAGAAGGATGGAGTGCCGGTATTCAAGTACTCCCGGTGGCGTGCAAAAGGACAGGCTTTGCCTGATGTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR-3UTR TCA 90 bp ATGTCCCTGGTGAAGACACCAGAAGCCAGGCCAAATTCCGTGGCATTGGCCCGACCTCTGTGGAGCCTGTaGACCCGATTTTCCTCACAT +
Preference number: 2 (lower is better)
Translates to: MSLVKTPEARPNSVALARPLWSL*TRFSSH
Trigger: ATGTGAGGAAAATCGGGTTCACAGGCTCCACAGAGG...TCGGGCCAATGCCACGGAATTTGGCCTGGCTTCTGGTGTCTTCACCAGGGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR-3UTR TCA 90 bp GCACTGATTATCTCCATGGGGATGAATTGGCTGCAGAAGGGCAGGACGTTGAGCCCGGCTGGTCCCAGTTaGTCTTGGCTGTCTCCTTCT +
Preference number: 2 (lower is better)
Translates to: ALIISMGMNWLQKGRTLSPAGPS*SWLSPS
Trigger: AGAAGGAGACAGCCAAGATCAACTGGGACCAGCCGG...GCTCAACGTCCTGCCCTTCTGCAGCCAATTCATCCCCATGGAGATAATCAGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR-3UTR GCA 90 bp CTGGCAGTACTCCATCAGCTTCACAAGGTGGGCATGGTGATTCTGCGGCCCGTGCACAAAGAGTCGGCCTaGTGCAATGCAATTCTCTCC +
Preference number: 2 (lower is better)
Translates to: LAVLHQLHKVGMVILRPVHKESA*CNAILS
Trigger: GGAGAGAATTGCATTGCAGCAGGCCGACTCTTTGTG...CACGGGCCGCAGAATCACCATGCCCACCTTGTGAAGCTGATGGAGTACTGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR-3UTR GCA 90 bp ACACTTCCATCGGTGGGATTGATGGTCTCAGAGGTCTTGGCGCCCTCGGCATCCTTTCCACGTAGTCAATaGTGCACTCGCCCTCCTCAT +
Preference number: 2 (lower is better)
Translates to: TLPSVGLMVSEVLAPSASFPRSQ*CTRPPH
Trigger: ATGAGGAGGGCGAGTGCAGCATTGACTACGTGGAAA...GGATGCCGAGGGCGCCAAGACCTCTGAGACCATCAATCCCACCGATGGAAGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR-3UTR CCA 90 bp CCACTCTCCGCACGAACTCATCATGAATGGAGTCCTCCACAAAGAGTCGGCCTGCTTCAAGGCTGTGAGTaGGGTCACCTGAGCAGGCTT +
Preference number: 2 (lower is better)
Translates to: PLSARTHHEWSPPQRVGLLQGCE*GHLSRL
Trigger: AAGCCTGCTCAGGTGACCCCACTCACAGCCTTGAAG...CAGGCCGACTCTTTGTGGAGGACTCCATTCATGATGAGTTCGTGCGGAGAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR-3UTR CCA 90 bp CCATCAGCTTCACAAGGTGGGCATGGTGATTCTGCGGCCCGTGGTCGGTGTCCCCGAACTCATCATGAATaGAGTCCTCCACAAAGAGTC +
Preference number: 2 (lower is better)
Translates to: PSASQGGHGDSAARGRCPRTHHE*SPPQRV
Trigger: GACTCTTTGTGGAGGACTCCATTCATGATGAGTTCG...GGGACACCGACCACGGGCCGCAGAATCACCATGCCCACCTTGTGAAGCTGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR-3UTR CCA 90 bp AATGGCCTCTGCCGGCTGGTCCCAGTTGATCTTGGCTGTCTCCTTCTTCTGAATATGGCCTCTGCCGGCTaGTCCCAGTTGATCTTGGCT +
Preference number: 2 (lower is better)
Translates to: NGLCRLVPVDLGCLLLLNMASAG*SQLILA
Trigger: AGCCAAGATCAACTGGGACCAGCCGGCAGAGGCCAT...ATTCAGAAGAAGGAGACAGCCAAGATCAACTGGGACCAGCCGGCAGAGGCCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000493803.5
3UTR CAA 90 bp AACACAGTGCCTGCCTGGAGCTTGTCACTGACATACAGGGCCTTGTaGATGTCCCTGGTGAAGACACCAGAAGCCAGGCCAAATTCCGTG +
Preference number: 2 (lower is better)
Translates to: NTVPAWSLSLTYRAL*MSLVKTPEARPNSV
Trigger: CACGGAATTTGGCCTGGCTTCTGGTGTCTTCACCAGGGACATCAACAAGGCCCTGTATGTCAGTGACAAGCTCCAGGCAGGCACTGTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR-3UTR TCA 90 bp GCAGGGACTTTCTTCTCACAAAGACCTTTCTTCAGTATTCGAAGGTCACTGTCTCCTGGCCGAGGGACCTaGTTCCCGCCGCAGACCAGT +
Preference number: 2 (lower is better)
Translates to: AGTFFSQRPFFSIRRSLSPGRGT*FPPQTS
Trigger: ACTGGTCTGCGGCGGGAATCAGGTCCCTCGGCCAGG...AGACAGTGACCTTCGAATACTGAAGAAAGGTCTTTGTGAGAAGAAAGTCCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR-3UTR TCA 90 bp TTCCACGTCTGTGAAAACAGTTGGCTCAAAGAAGAACCCTGGCCGAGGGACCTGAAAGATGATGAGGGGTaGCTTCCCGCCCAGTTCCAG +
Preference number: 2 (lower is better)
Translates to: FHVCENSWLKEEPWPRDLKDDEG*LPAQFQ
Trigger: CTGGAACTGGGCGGGAAGTCACCCCTCATCATCTTT...CAGGTCCCTCGGCCAGGGTTCTTCTTTGAGCCAACTGTTTTCACAGACGTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455064.6
3UTR-3UTR TCA 90 bp AGTGGAGTCTTCAACCTCCAGGACTTTGGGGAGGATCCGCTGCCAAACACTCCGTTATCTCCATGGGGATaGATTGGCTGCAGAAGGGCA +
Preference number: 2 (lower is better)
Translates to: SGVFNLQDFGEDPLPNTPLSPWG*IGCRRA
Trigger: TGCCCTTCTGCAGCCAATTCATCCCCATGGAGATAA...CGGAGTGTTTGGCAGCGGATCCTCCCCAAAGTCCTGGAGGTTGAAGACTCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR-3UTR CCA 90 bp TCCGCACCTCTTCTACCACTCTCCGCACGAACTCATCATGAATGGAGTCCTCCATCCAAGATGCAGACATaGTGTGCAGGCAGGAGGGCT +
Preference number: 2 (lower is better)
Translates to: SAPLLPLSARTHHEWSPPSKMQT*CAGRRA
Trigger: AGCCCTCCTGCCTGCACACCATGTCTGCATCTTGGA...TGGAGGACTCCATTCATGATGAGTTCGTGCGGAGAGTGGTAGAAGAGGTGCGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR-3UTR CCA 90 bp TCTTCCACGTCTGTGAAAACAGTTGGCTCAAAGAAGAACCCTGGCCGAGGGACCAGGGCTGCTTCTGACTaGACAGAGGGCGTCCAAGAT +
Preference number: 2 (lower is better)
Translates to: SSTSVKTVGSKKNPGRGTRAASD*TEGVQD
Trigger: ATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCT...GGTCCCTCGGCCAGGGTTCTTCTTTGAGCCAACTGTTTTCACAGACGTGGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR-3UTR CCA 90 bp GGCCCGAAGGACTCCTCCTTGGCTATGAACATGTGGTCTTCCACGTCTGTGAAAAAGCTTTATTCTCCCTaGGAGGGGCACACCTCACCC +
Preference number: 2 (lower is better)
Translates to: GPKDSSLAMNMWSSTSVKKLYSP*EGHTSP
Trigger: GGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTT...TTTCACAGACGTGGAAGACCACATGTTCATAGCCAAGGAGGAGTCCTTCGGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR-3UTR CCA 90 bp CCTAGATCTTTGCCAAATCCAGACTGTTTGAATCCTCCGAAGGGAGCGGCCACGCAAATTCCGTGGCATTaGCCCGAGACAGCACGGCAT +
Preference number: 2 (lower is better)
Translates to: PRSLPNPDCLNPPKGAATQIPWH*PETARH
Trigger: ATGCCGTGCTGTCTCGGGCCAATGCCACGGAATTTG...CGTGGCCGCTCCCTTCGGAGGATTCAAACAGTCTGGATTTGGCAAAGATCTAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR CAA 90 bp ACAAACACAGTGCCTGCCTGGAGCTTGTCACTGACATACAGGGCCTaGTTGATGTCCCTGGTGAAGACACCAGAAGCCAGGCCAAATTCC +
Preference number: 2 (lower is better)
Translates to: TNTVPAWSLSLTYRA*LMSLVKTPEARPNS
Trigger: GGAATTTGGCCTGGCTTCTGGTGTCTTCACCAGGGACATCAACAAGGCCCTGTATGTCAGTGACAAGCTCCAGGCAGGCACTGTGTTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR CAA 90 bp GTGGCTTTGAGCAGGCAAGTGACCCACAGCCGTGCCCTTACCATTTaGTCATCATTCCCAAAGAGGATGAGTCCTGCTTTGGTGACCACC +
Preference number: 2 (lower is better)
Translates to: VALSRQVTHSRALTI*SSFPKRMSPALVTT
Trigger: GGTGGTCACCAAAGCAGGACTCATCCTCTTTGGGAATGATGACAAAATGGTAAGGGCACGGCTGTGGGTCACTTGCCTGCTCAAAGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493803.5
3UTR CAA 90 bp CCAGACAGTGGCAGCTGCTTCCTGCAGTCGCTGTCCCCAATAACTTaGGGCTCTCTGCCTTCCACTCTTCAATACCCAAGGAACACTTCT +
Preference number: 2 (lower is better)
Translates to: PDSGSCFLQSLSPIT*GSLPSTLQYPRNTS
Trigger: AGAAGTGTTCCTTGGGTATTGAAGAGTGGAAGGCAGAGAGCCCAAAGTTATTGGGGACAGCGACTGCAGGAAGCAGCTGCCACTGTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000511283.2
3UTR-3UTR CCA 90 bp ACAAACACAGTGCCTGCCTGGAGCTTGTCACTGACATACAGGGCCTTGTTGATGTCCAAGATGCAGACATaGTGTGCAGGCAGGAGGGCT +
Preference number: 2 (lower is better)
Translates to: TNTVPAWSLSLTYRALLMSKMQT*CAGRRA
Trigger: AGCCCTCCTGCCTGCACACCATGTCTGCATCTTGGA...CATCAACAAGGCCCTGTATGTCAGTGACAAGCTCCAGGCAGGCACTGTGTTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR-3UTR CCA 90 bp AATGGCCTCTGCCGGCTGGTCCCAGTTGATCTTGGCTGTCTCCTTCTTCTGAATCCCAGAACAGAGAAGTaGGTAAACTGCCTCGGACAC +
Preference number: 2 (lower is better)
Translates to: NGLCRLVPVDLGCLLLLNPRTEK*VNCLGH
Trigger: GTGTCCGAGGCAGTTTACCCACTTCTCTGTTCTGGG...ATTCAGAAGAAGGAGACAGCCAAGATCAACTGGGACCAGCCGGCAGAGGCCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493803.5
3UTR-3UTR TCA 90 bp ACAAACACAGTGCCTGCCTGGAGCTTGTCACTGACATACAGGGCCTTGTTGATGCCTCTGTGGAGCCTGTaGACCCGATTTTCCTCACAT +
Preference number: 2 (lower is better)
Translates to: TNTVPAWSLSLTYRALLMPLWSL*TRFSSH
Trigger: ATGTGAGGAAAATCGGGTTCACAGGCTCCACAGAGG...CATCAACAAGGCCCTGTATGTCAGTGACAAGCTCCAGGCAGGCACTGTGTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR-3UTR TCA 90 bp CCCAAAGAGGATGAGTCCTGCTTTGGTGACCACCCCTGGCCGATGGGCTCCTGGTGTTCAGCGTTGAGTTaGAAAATGTCAGTTTCTGTT +
Preference number: 2 (lower is better)
Translates to: PKEDESCFGDHPWPMGSWCSALS*KMSVSV
Trigger: AACAGAAACTGACATTTTTCAACTCAACGCTGAACA...CCAGGAGCCCATCGGCCAGGGGTGGTCACCAAAGCAGGACTCATCCTCTTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000493803.5
3UTR CAA 90 bp TCAGCAAACCGAGAGATGATCATGACAGGCCCGAAGGACTCCTCCTaGGCTATGAACATGTGGTCTTCCACGTCTGTGAAAACAGTTGGC +
Preference number: 2 (lower is better)
Translates to: SANREMIMTGPKDSS*AMNMWSSTSVKTVG
Trigger: GCCAACTGTTTTCACAGACGTGGAAGACCACATGTTCATAGCCAAGGAGGAGTCCTTCGGGCCTGTCATGATCATCTCTCGGTTTGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR-3UTR TCA 90 bp AGGGGCAGGGACTTTCTTCTCACAAAGACCTTTCTTCAGTATTCGAAGGTCACTCACATCAGGATGGTCTaGGAGTCTCTGGCCGACCAG +
Preference number: 2 (lower is better)
Translates to: RGRDFLLTKTFLQYSKVTHIRMV*ESLADQ
Trigger: CTGGTCGGCCAGAGACTCTCAGACCATCCTGATGTG...AGTGACCTTCGAATACTGAAGAAAGGTCTTTGTGAGAAGAAAGTCCCTGCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR-3UTR TCA 90 bp CCTAGATCTTTGCCAAATCCAGACTGTTTGAATCCTCCGAAGGGAGCGGCCACGGGTCTTCCACGTCTGTaGAAACAGTTGGCTCAAAGA +
Preference number: 2 (lower is better)
Translates to: PRSLPNPDCLNPPKGAATGLPRL*KQLAQR
Trigger: TCTTTGAGCCAACTGTTTTCACAGACGTGGAAGACC...CGTGGCCGCTCCCTTCGGAGGATTCAAACAGTCTGGATTTGGCAAAGATCTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR-3UTR GCA 90 bp AGGCCTGAAGTGTTCAGCGTTGAGTTGAAAAATGTCAGTTTCTGTTCACAGGCCGAGAAGTGGGTAAACTaGCTCGGACACCCTGTGCTC +
Preference number: 2 (lower is better)
Translates to: RPEVFSVELKNVSFCSQAEKWVN*LGHPVL
Trigger: GAGCACAGGGTGTCCGAGGCAGTTTACCCACTTCTC...GGCCTGTGAACAGAAACTGACATTTTTCAACTCAACGCTGAACACTTCAGGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493803.5
3UTR CAA 90 bp GAGTCCTCCACAAAGAGTCGGCCTGCTGCAATGCAATTCTCTCCTTaGTTGAAGAAAACAGAACTCATCCCCATCTGCACAGCCTTGTTG +
Preference number: 2 (lower is better)
Translates to: ESSTKSRPAAMQFSP*LKKTELIPICTALL
Trigger: CAACAAGGCTGTGCAGATGGGGATGAGTTCTGTTTTCTTCAACAAAGGAGAGAATTGCATTGCAGCAGGCCGACTCTTTGTGGAGGACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455064.6
3UTR-3UTR TCA 90 bp CAGGGACTTTCTTCTCACAAAGACCTTTCTTCAGTATTCGAAGGTCACTGTCTTCACATCAGGATGGTCTaGGAGTCTCTGGCCGACCAG +
Preference number: 2 (lower is better)
Translates to: QGLSSHKDLSSVFEGHCLHIRMV*ESLADQ
Trigger: CTGGTCGGCCAGAGACTCTCAGACCATCCTGATGTG...AAGACAGTGACCTTCGAATACTGAAGAAAGGTCTTTGTGAGAAGAAAGTCCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR-3UTR TCA 90 bp ATAACTTTGGGCTCTCTGCCTTCCACTCTTCAATACCCAAGGAACACTTCTTTGTTAGAGCCTCTGGTGTaGTGTTTGGGCCCTGACTGG +
Preference number: 2 (lower is better)
Translates to: ITLGSLPSTLQYPRNTSLLEPLV*CLGPDW
Trigger: CCAGTCAGGGCCCAAACATCACACCAGAGGCTCTAA...CAAAGAAGTGTTCCTTGGGTATTGAAGAGTGGAAGGCAGAGAGCCCAAAGTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000511283.2
3UTR-3UTR CCA 90 bp TTGGGCTCTCTGCCTTCCACTCTTCAATACCCAAGGAACACTTCTTTGTATTCACTCTGGTGTGATGTTTaGGCCCTGACTGGACTGGCT +
Preference number: 2 (lower is better)
Translates to: LGSLPSTLQYPRNTSLYSLWCDV*ALTGLA
Trigger: AGCCAGTCCAGTCAGGGCCCAAACATCACACCAGAG...TGAATACAAAGAAGTGTTCCTTGGGTATTGAAGAGTGGAAGGCAGAGAGCCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000511283.2
3UTR CAA 90 bp TTTCTTCTCACAAAGACCTTTCTTCAGTATTCGAAGGTCACTGTCTaGACCCGCAGGTACTCGTTCAGAGCCGCCTCTCCTAGATCTTTG +
Preference number: 2 (lower is better)
Translates to: FLLTKTFLQYSKVTV*TRRYSFRAASPRSL
Trigger: CAAAGATCTAGGAGAGGCGGCTCTGAACGAGTACCTGCGGGTCAAGACAGTGACCTTCGAATACTGAAGAAAGGTCTTTGTGAGAAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR-3UTR GCA 90 bp GCAGGGACTTTCTTCTCACAAAGACCTTTCTTCAGTATTCGAAGGTCACTGTCTCAGCTTTTCATGATGTaGTTGCCCACCTCTGTGGAG +
Preference number: 2 (lower is better)
Translates to: AGTFFSQRPFFSIRRSLSQLFMM*LPTSVE
Trigger: CTCCACAGAGGTGGGCAAGCACATCATGAAAAGCTG...AGACAGTGACCTTCGAATACTGAAGAAAGGTCTTTGTGAGAAGAAAGTCCCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455064.6
3UTR-3UTR GCA 90 bp CAGGGACTTTCTTCTCACAAAGACCTTTCTTCAGTATTCGAAGGTCACTGTCTTCCACACCTTTGGGAATaGCGGCCTTTAATGTCAGCT +
Preference number: 2 (lower is better)
Translates to: QGLSSHKDLSSVFEGHCLPHLWE*RPLMSA
Trigger: AGCTGACATTAAAGGCCGGCATTCCCAAAGGTGTGG...AAGACAGTGACCTTCGAATACTGAAGAAAGGTCTTTGTGAGAAGAAAGTCCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR-3UTR CAA 90 bp GTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGGGTGCCTGCCTGGAGCTaGTCACTGACATACAGGGCC +
Preference number: 3 (lower is better)
Translates to: VGGAVHPGSRGRGPQPRGVPAWS*SLTYRA
Trigger: GGCCCTGTATGTCAGTGACAAGCTCCAGGCAGGCAC...CCCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR CCA 72 bp TCCTGCTTTGGTGACCACCCCTGGCCGATGGGCTCCTaGGATGGGCAAAGCGTCTCCCTCGGGCACCAGGCC +
Preference number: 3 (lower is better)
Translates to: SCFGDHPWPMGS*DGQSVSLGHQA
Trigger: GGCCTGGTGCCCGAGGGAGACGCTTTGCCCATCCCAGGAGCCCATCGGCCAGGGGTGGTCACCAAAGCAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000493803.5
3UTR-3UTR CAA 90 bp CCGAGGGACCTGATTCCCGCCGCAGACCAGTGTGGCCCCTTCCTTCACGCCATGTCCCTGTCCAGCGGGTaGCCCACCTTCATCTTCCGC +
Preference number: 3 (lower is better)
Translates to: PRDLIPAADQCGPFLHAMSLSSG*PTFIFR
Trigger: GCGGAAGATGAAGGTGGGCAACCCGCTGGACAGGGA...CATGGCGTGAAGGAAGGGGCCACACTGGTCTGCGGCGGGAATCAGGTCCCTCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR-3UTR CAA 90 bp CTGAGGGAGTCTGGGGGCTTTGCCCTCAGCGATCAGCCTCACGGCCTGCACCATGGGAGTCTGGGGGCTTaGCCCTCAGCGATCAGCCTC +
Preference number: 3 (lower is better)
Translates to: LRESGGFALSDQPHGLHHGSLGA*PSAISL
Trigger: GAGGCTGATCGCTGAGGGCAAAGCCCCCAGACTCCC...ATGGTGCAGGCCGTGAGGCTGATCGCTGAGGGCAAAGCCCCCAGACTCCCTCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000493803.5
3UTR-3UTR CAA 90 bp GGCAGGTACATGTTGGGCTCCCACCTGTACATCAGCCGGCCCCGGTCCCGCGCATTCTCAAAGGCATCCTaGGCTGCGGCCACTGCCTTG +
Preference number: 3 (lower is better)
Translates to: GRYMLGSHLYISRPRSRAFSKAS*AAATAL
Trigger: CAAGGCAGTGGCCGCAGCCAAGGATGCCTTTGAGAA...TGCGCGGGACCGGGGCCGGCTGATGTACAGGTGGGAGCCCAACATGTACCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR TCA 72 bp CCCACCTGTACATCAGCCGGCCCCGGTCCCGCGCACTaGTCTTCCCCCACCGTCCATTCTCAAAGGCATCCT +
Preference number: 3 (lower is better)
Translates to: PTCTSAGPGPAH*SSPTVHSQRHP
Trigger: AGGATGCCTTTGAGAATGGACGGTGGGGGAAGATCAGTGCGCGGGACCGGGGCCGGCTGATGTACAGGTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR CCA 72 bp CTTTGTCTGCCTGGGAGGCCCAGCCTGCGCCCACTTTaGAAGCATCCCTTGGCTTCCGCACCTCCTCACCTC +
Preference number: 3 (lower is better)
Translates to: LCLPGRPSLRPL*KHPLASAPPHL
Trigger: GAGGTGAGGAGGTGCGGAAGCCAAGGGATGCTTCCAAAGTGGGCGCAGGCTGGGCCTCCCAGGCAGACAAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR-3UTR CAA 90 bp TCATTCCCAAAGAGGATGAGTCCTGCTTTGGTGACCACCCCTGGCCGATGGGCTCAGGCTCCCGGCACCTaGTCGTTCCCGCGGATCCAG +
Preference number: 3 (lower is better)
Translates to: SFPKRMSPALVTTPGRWAQAPGT*SFPRIQ
Trigger: CTGGATCCGCGGGAACGACAAGGTGCCGGGAGCCTG...AGCCCATCGGCCAGGGGTGGTCACCAAAGCAGGACTCATCCTCTTTGGGAATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000493803.5
3UTR TCA 72 bp GCTCCCGGCACCTTGTCGTTCCCGCGGATCCAGTTGTaGATGGCCTCTGCCGGCTGGTCCCAGTTGATCTTG +
Preference number: 3 (lower is better)
Translates to: APGTLSFPRIQL*MASAGWSQLIL
Trigger: CAAGATCAACTGGGACCAGCCGGCAGAGGCCATTCACAACTGGATCCGCGGGAACGACAAGGTGCCGGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000493803.5
3UTR GCA 72 bp CCAAACACTCCGCACAGCCTCCGCAGTAACCAGCTCTaGCTCTGTCAGCTCAAGGACACTGCTGGCTGCCCC +
Preference number: 3 (lower is better)
Translates to: PNTPHSLRSNQL*LCQLKDTAGCP
Trigger: GGGGCAGCCAGCAGTGTCCTTGAGCTGACAGAGGCAGAGCTGGTTACTGCGGAGGCTGTGCGGAGTGTTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR GCA 72 bp CTTCCCCCACCGTCCATTCTCAAAGGCATCCTTGGCTaGGGCCACTGCCTTGTCGACGTCGGTGACTTGGGC +
Preference number: 3 (lower is better)
Translates to: LPPPSILKGILG*GHCLVDVGDLG
Trigger: GCCCAAGTCACCGACGTCGACAAGGCAGTGGCCGCAGCCAAGGATGCCTTTGAGAATGGACGGTGGGGGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR CCA 72 bp GGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGACTaGACAGAGGGCGTCCAAGATGCAGACATGGTGTGC +
Preference number: 3 (lower is better)
Translates to: GAHLTQPRAASD*TEGVQDADMVC
Trigger: GCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
3UTR TCA 72 bp TGGCAGTACTCCATCAGCTTCACAAGGTGGGCATGGTaGTTCTGCGGCCCGTGGTCGGTGTCCCTGTCCAGC +
Preference number: 3 (lower is better)
Translates to: WQYSISFTRWAW*FCGPWSVSLSS
Trigger: GCTGGACAGGGACACCGACCACGGGCCGCAGAATCACCATGCCCACCTTGTGAAGCTGATGGAGTACTGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR GCA 72 bp CCGTCCATTCTCAAAGGCATCCTTGGCTGCGGCCACTaGCTTGTCGACGTCGGTGACTTGGGCCAGGGATAC +
Preference number: 3 (lower is better)
Translates to: PSILKGILGCGH*LVDVGDLGQGY
Trigger: GTATCCCTGGCCCAAGTCACCGACGTCGACAAGGCAGTGGCCGCAGCCAAGGATGCCTTTGAGAATGGACGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR CCA 72 bp TTGGCTGCGGCCACTGCCTTGTCGACGTCGGTGACTTaGGCCAGGGATACCTGGCAGATGACACTTCCATCG +
Preference number: 3 (lower is better)
Translates to: LAAATALSTSVT*ARDTWQMTLPS
Trigger: CGATGGAAGTGTCATCTGCCAGGTATCCCTGGCCCAAGTCACCGACGTCGACAAGGCAGTGGCCGCAGCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR CCA 72 bp CCGTGCCACTGCCCAGAAGCTGATGGTGGCAGTGGCTaGCAGGTACATGTTGGGCTCCCACCTGTACATCAG +
Preference number: 3 (lower is better)
Translates to: PCHCPEADGGSG*QVHVGLPPVHQ
Trigger: CTGATGTACAGGTGGGAGCCCAACATGTACCTGCCAGCCACTGCCACCATCAGCTTCTGGGCAGTGGCACGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR-3UTR CAA 90 bp AGTCCAAGGACAGGAGCATGGGTGGCTTTGAGCAGGCAAGTGACCCACAGCCGTAGGATGAGTCCTGCTTaGGTGACCACCCCTGGCCGA +
Preference number: 3 (lower is better)
Translates to: SPRTGAWVALSRQVTHSRRMSPA*VTTPGR
Trigger: TCGGCCAGGGGTGGTCACCAAAGCAGGACTCATCCT...ACGGCTGTGGGTCACTTGCCTGCTCAAAGCCACCCATGCTCCTGTCCTTGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493803.5
3UTR-3UTR CAA 90 bp CACGGCATCCAAGTCCCCATCAGCAAACCGAGAGATGATCATGACAGGCCCGAATCCCTGTCCAGCGGGTaGCCCACCTTCATCTTCCGC +
Preference number: 3 (lower is better)
Translates to: HGIQVPISKPRDDHDRPESLSSG*PTFIFR
Trigger: GCGGAAGATGAAGGTGGGCAACCCGCTGGACAGGGA...TTCGGGCCTGTCATGATCATCTCTCGGTTTGCTGATGGGGACTTGGATGCCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR-3UTR CAA 90 bp AATGGCCTCTGCCGGCTGGTCCCAGTTGATCTTGGCTGTCTCCTTCTTCTGAATGGGAGTCTGGGGGCTTaGCCCTCAGCGATCAGCCTC +
Preference number: 3 (lower is better)
Translates to: NGLCRLVPVDLGCLLLLNGSLGA*PSAISL
Trigger: GAGGCTGATCGCTGAGGGCAAAGCCCCCAGACTCCC...ATTCAGAAGAAGGAGACAGCCAAGATCAACTGGGACCAGCCGGCAGAGGCCATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000493803.5
3UTR-3UTR CAA 90 bp TTCCCAAAGAGGATGAGTCCTGCTTTGGTGACCACCCCTGGCCGATGGGCTCCTCTCCATGGGGATGAATaGGCTGCAGAAGGGCAGGAC +
Preference number: 3 (lower is better)
Translates to: FPKRMSPALVTTPGRWAPLHGDE*AAEGQD
Trigger: GTCCTGCCCTTCTGCAGCCAATTCATCCCCATGGAG...AGGAGCCCATCGGCCAGGGGTGGTCACCAAAGCAGGACTCATCCTCTTTGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR-3UTR CAA 90 bp GGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCCTTTTCATGATGTGCTaGCCCACCTCTGTGGAGCCT +
Preference number: 3 (lower is better)
Translates to: GLLLTGQRASKMQTWCAGLFMMC*PTSVEP
Trigger: AGGCTCCACAGAGGTGGGCAAGCACATCATGAAAAG...GCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR-3UTR CAA 90 bp GGTGACTTGGGCCAGGGATACCTGGCAGATGACACTTCCATCGGTGGGATTGATCGCCACCGGGAGTACTaGAATACCGGCACTCCATCC +
Preference number: 3 (lower is better)
Translates to: GDLGQGYLADDTSIGGIDRHREY*NTGTPS
Trigger: GGATGGAGTGCCGGTATTCAAGTACTCCCGGTGGCG...ATCAATCCCACCGATGGAAGTGTCATCTGCCAGGTATCCCTGGCCCAAGTCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR TCA 72 bp GCCTGTGAACCCGATTTTCCTCACATCAGGATGGTCTaGGAGTCTCTGGCCGACCAGGGAGCCAGATCCTGG +
Preference number: 3 (lower is better)
Translates to: ACEPDFPHIRMV*ESLADQGARSW
Trigger: CCAGGATCTGGCTCCCTGGTCGGCCAGAGACTCTCAGACCATCCTGATGTGAGGAAAATCGGGTTCACAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR GCA 72 bp CTTGTCGTTCCCGCGGATCCAGTTGTGAATGGCCTCTaGCGGCTGGTCCCAGTTGATCTTGGCTGTCTCCTT +
Preference number: 3 (lower is better)
Translates to: LVVPADPVVNGL*RLVPVDLGCLL
Trigger: AAGGAGACAGCCAAGATCAACTGGGACCAGCCGGCAGAGGCCATTCACAACTGGATCCGCGGGAACGACAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000493803.5
3UTR CCA 72 bp CAGAAGGGCAGGACGTTGAGCTCGGCCCCCAAAGCCTaGTATTTTGCCACCACATCAGGCAAAGCCTGTCCT +
Preference number: 3 (lower is better)
Translates to: QKGRTLSSAPKA*YFATTSGKACP
Trigger: AGGACAGGCTTTGCCTGATGTGGTGGCAAAATACCAGGCTTTGGGGGCCGAGCTCAACGTCCTGCCCTTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR-3UTR CAA 90 bp AATGGCCTCTGCCGGCTGGTCCCAGTTGATCTTGGCTGTCTCCTTCTTCTGAATGCCGGCTGGTCCCAGTaGATCTTGGCTGTCTCCTTC +
Preference number: 3 (lower is better)
Translates to: NGLCRLVPVDLGCLLLLNAGWSQ*ILAVSF
Trigger: GAAGGAGACAGCCAAGATCAACTGGGACCAGCCGGC...ATTCAGAAGAAGGAGACAGCCAAGATCAACTGGGACCAGCCGGCAGAGGCCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000493803.5
3UTR TCA 72 bp TTCTCTGTTAGAGCCTCTGGTGTGATGTTTGGGCCCTaGCTGGACTGGCTCTCCTCTCCGGTCTCCTCCTCT +
Preference number: 3 (lower is better)
Translates to: FSVRASGVMFGP*LDWLSSPVSSS
Trigger: AGAGGAGGAGACCGGAGAGGAGAGCCAGTCCAGTCAGGGCCCAAACATCACACCAGAGGCTCTAACAGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000511283.2
3UTR TCA 72 bp CTCCACCAGCCTCACAACGTCCACAGACGCGGCCCCTaGCTTGAAGAAATCAGTGGAGTCTTCAACCTCCAG +
Preference number: 3 (lower is better)
Translates to: LHQPHNVHRRGP*LEEISGVFNLQ
Trigger: CTGGAGGTTGAAGACTCCACTGATTTCTTCAAGTCAGGGGCCGCGTCTGTGGACGTTGTGAGGCTGGTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR CCA 72 bp CCGATTTTCCTCACATCAGGATGGTCTGAGAGTCTCTaGCCGACCAGGGAGCCAGATCCTGGGAGGACGTTA +
Preference number: 3 (lower is better)
Translates to: PIFLTSGWSESL*PTREPDPGRTL
Trigger: TAACGTCCTCCCAGGATCTGGCTCCCTGGTCGGCCAGAGACTCTCAGACCATCCTGATGTGAGGAAAATCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR CCA 72 bp GTGGAGCCTGTGAACCCGATTTTCCTCACATCAGGATaGTCTGAGAGTCTCTGGCCGACCAGGGAGCCAGAT +
Preference number: 3 (lower is better)
Translates to: VEPVNPIFLTSG*SESLWPTREPD
Trigger: ATCTGGCTCCCTGGTCGGCCAGAGACTCTCAGACCATCCTGATGTGAGGAAAATCGGGTTCACAGGCTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR-3UTR CAA 90 bp GTGGACGGTCTCTCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCCGAAGGACTCCTCCTaGGCTATGAACATGTGGTCT +
Preference number: 3 (lower is better)
Translates to: VDGLSSEALFSLGGAHLTPKDSS*AMNMWS
Trigger: AGACCACATGTTCATAGCCAAGGAGGAGTCCTTCGG...GGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGAGAGACCGTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455064.6
3UTR-3UTR CAA 90 bp ACACTTCCATCGGTGGGATTGATGGTCTCAGAGGTCTTGGCGCCCTCGGCATCCCCAAAGCCTGGTATTTaGCCACCACATCAGGCAAAG +
Preference number: 3 (lower is better)
Translates to: TLPSVGLMVSEVLAPSASPKPGI*PPHQAK
Trigger: CTTTGCCTGATGTGGTGGCAAAATACCAGGCTTTGG...GGATGCCGAGGGCGCCAAGACCTCTGAGACCATCAATCCCACCGATGGAAGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR TCA 72 bp TTTCCATTTTCTCCAGAGGAGCCTAGGGTCTTCCTGTaGGGCCTGAGTCCAAGGACAGGAGCATGGGTGGCT +
Preference number: 3 (lower is better)
Translates to: FPFSPEEPRVFL*GLSPRTGAWVA
Trigger: AGCCACCCATGCTCCTGTCCTTGGACTCAGGCCTCACAGGAAGACCCTAGGCTCCTCTGGAGAAAATGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493803.5
3UTR TCA 72 bp GCAAAGCCTGTCCTTTTGCACGCCACCGGGAGTACTTaGATACCGGCACTCCATCCTTCTCAGCTTCCAGAC +
Preference number: 3 (lower is better)
Translates to: AKPVLLHATGST*IPALHPSQLPD
Trigger: GTCTGGAAGCTGAGAAGGATGGAGTGCCGGTATTCAAGTACTCCCGGTGGCGTGCAAAAGGACAGGCTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR TCA 72 bp CCAGCCTCACAACGTCCACAGACGCGGCCCCTGACTTaGAGAAATCAGTGGAGTCTTCAACCTCCAGGACTT +
Preference number: 3 (lower is better)
Translates to: PASQRPQTRPLT*RNQWSLQPPGL
Trigger: AAGTCCTGGAGGTTGAAGACTCCACTGATTTCTTCAAGTCAGGGGCCGCGTCTGTGGACGTTGTGAGGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR GCA 72 bp CAGCATTTTGTCATCATTCCCAAAGAGGATGAGTCCTaGTTTGGTGACCACCCCTGGCCGATGGGCTCCTGG +
Preference number: 3 (lower is better)
Translates to: QHFVIIPKEDES*FGDHPWPMGSW
Trigger: CCAGGAGCCCATCGGCCAGGGGTGGTCACCAAAGCAGGACTCATCCTCTTTGGGAATGATGACAAAATGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR-3UTR CAA 90 bp CCGAGGGACCTGATTCCCGCCGCAGACCAGTGTGGCCCCTTCCTTCACGCCATGATGCAATTCTCTCCTTaGTTGAAGAAAACAGAACTC +
Preference number: 3 (lower is better)
Translates to: PRDLIPAADQCGPFLHAMMQFSP*LKKTEL
Trigger: GAGTTCTGTTTTCTTCAACAAAGGAGAGAATTGCAT...CATGGCGTGAAGGAAGGGGCCACACTGGTCTGCGGCGGGAATCAGGTCCCTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR-3UTR CAA 90 bp GGCCCGAAGGACTCCTCCTTGGCTATGAACATGTGGTCTTCCACGTCTGTGAAACCCATCTGCACAGCCTaGTTGAGGTCACAGTCAGCA +
Preference number: 3 (lower is better)
Translates to: GPKDSSLAMNMWSSTSVKPICTA*LRSQSA
Trigger: TGCTGACTGTGACCTCAACAAGGCTGTGCAGATGGG...TTTCACAGACGTGGAAGACCACATGTTCATAGCCAAGGAGGAGTCCTTCGGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455064.6
3UTR GCA 72 bp TACCATTTTGTCATCATTCCCAAAGAGGATGAGTCCTaGTTTGGTGACCACCCCTGGCCGATGGGCTCCTGG +
Preference number: 3 (lower is better)
Translates to: YHFVIIPKEDES*FGDHPWPMGSW
Trigger: CCAGGAGCCCATCGGCCAGGGGTGGTCACCAAAGCAGGACTCATCCTCTTTGGGAATGATGACAAAATGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493803.5
3UTR GCA 72 bp GTATTTTGCCACCACATCAGGCAAAGCCTGTCCTTTTaGACGCCACCGGGAGTACTTGAATACCGGCACTCC +
Preference number: 3 (lower is better)
Translates to: VFCHHIRQSLSF*TPPGVLEYRHS
Trigger: GGAGTGCCGGTATTCAAGTACTCCCGGTGGCGTGCAAAAGGACAGGCTTTGCCTGATGTGGTGGCAAAATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR CCA 72 bp CCTCTTCTACCACTCTCCGCACGAACTCATCATGAATaGAGTCCTCCACAAAGAGTCGGCCTGCTGCAATGC +
Preference number: 3 (lower is better)
Translates to: PLLPLSARTHHE*SPPQRVGLLQC
Trigger: GCATTGCAGCAGGCCGACTCTTTGTGGAGGACTCCATTCATGATGAGTTCGTGCGGAGAGTGGTAGAAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR CCA 72 bp TCCTCATCGTCCCCTCGCAGCTTCCTCACTAACAGCTaGATGAAGTCCCCAAAGGTGGATGCCATGTACACA +
Preference number: 3 (lower is better)
Translates to: SSSSPRSFLTNS*MKSPKVDAMYT
Trigger: TGTGTACATGGCATCCACCTTTGGGGACTTCATCCAGCTGTTAGTGAGGAAGCTGCGAGGGGACGATGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR-3UTR CAA 90 bp TCTCCGCACGAACTCATCATGAATGGAGTCCTCCACAAAGAGTCGGCCTGCTGCATCTGCACAGCCTTGTaGAGGTCACAGTCAGCAAAG +
Preference number: 3 (lower is better)
Translates to: SPHELIMNGVLHKESACCICTAL*RSQSAK
Trigger: CTTTGCTGACTGTGACCTCAACAAGGCTGTGCAGAT...GCAGCAGGCCGACTCTTTGTGGAGGACTCCATTCATGATGAGTTCGTGCGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455064.6
3UTR-3UTR CAA 90 bp TCCATTCTCAAAGGCATCCTTGGCTGCGGCCACTGCCTTGTCGACGTCGGTGACTTCACCAGCAGCATTTaGTCATCATTCCCAAAGAGG +
Preference number: 3 (lower is better)
Translates to: SILKGILGCGHCLVDVGDFTSSI*SSFPKR
Trigger: CCTCTTTGGGAATGATGACAAAATGCTGCTGGTGAA...GTCACCGACGTCGACAAGGCAGTGGCCGCAGCCAAGGATGCCTTTGAGAATGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR TCA 72 bp CATCGTCCCCTCGCAGCTTCCTCACTAACAGCTGGATaGAGTCCCCAAAGGTGGATGCCATGTACACATCTT +
Preference number: 3 (lower is better)
Translates to: HRPLAASSLTAG*SPQRWMPCTHL
Trigger: AAGATGTGTACATGGCATCCACCTTTGGGGACTTCATCCAGCTGTTAGTGAGGAAGCTGCGAGGGGACGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR-3UTR CAA 90 bp GGTTGCCCACCTTCATCTTCCGCACCTCTTCTACCACTCTCCGCACGAACTCATACGTTAACCACACCTTaGGGAATGCCGGCCTTTAAT +
Preference number: 3 (lower is better)
Translates to: GCPPSSSAPLLPLSARTHTLTTP*GMPAFN
Trigger: ATTAAAGGCCGGCATTCCCAAAGGTGTGGTTAACGT...ATGAGTTCGTGCGGAGAGTGGTAGAAGAGGTGCGGAAGATGAAGGTGGGCAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR-3UTR CAA 90 bp TCTCCGCACGAACTCATCATGAATGGAGTCCTCCACAAAGAGTCGGCCTGCTGCACGTTAACCACACCTTaGGGAATGCCGGCCTTTAAT +
Preference number: 3 (lower is better)
Translates to: SPHELIMNGVLHKESACCTLTTP*GMPAFN
Trigger: ATTAAAGGCCGGCATTCCCAAAGGTGTGGTTAACGT...GCAGCAGGCCGACTCTTTGTGGAGGACTCCATTCATGATGAGTTCGTGCGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR-3UTR CAA 90 bp ACAAACACAGTGCCTGCCTGGAGCTTGTCACTGACATACAGGGCCTTGTTGATGCTGACATACAGGGCCTaGTTGATGTCCCTGGTGAAG +
Preference number: 3 (lower is better)
Translates to: TNTVPAWSLSLTYRALLMLTYRA*LMSLVK
Trigger: CTTCACCAGGGACATCAACAAGGCCCTGTATGTCAG...CATCAACAAGGCCCTGTATGTCAGTGACAAGCTCCAGGCAGGCACTGTGTTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR-3UTR CAA 90 bp CTGATGGTGGCAGTGGCTGGCAGGTACATGTTGGGCTCCCACCTGTACATCAGCGTGTTCAGCGTTGAGTaGAAAAATGTCAGTTTCTGT +
Preference number: 3 (lower is better)
Translates to: LMVAVAGRYMLGSHLYISVFSVE*KNVSFC
Trigger: ACAGAAACTGACATTTTTCAACTCAACGCTGAACAC...GCTGATGTACAGGTGGGAGCCCAACATGTACCTGCCAGCCACTGCCACCATCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR-3UTR CAA 90 bp CTTCCTGTGAGGCCTGAGTCCAAGGACAGGAGCATGGGTGGCTTTGAGCAGGCAGTGTTCAGCGTTGAGTaGAAAAATGTCAGTTTCTGT +
Preference number: 3 (lower is better)
Translates to: LPVRPESKDRSMGGFEQAVFSVE*KNVSFC
Trigger: ACAGAAACTGACATTTTTCAACTCAACGCTGAACAC...TGCCTGCTCAAAGCCACCCATGCTCCTGTCCTTGGACTCAGGCCTCACAGGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493803.5
3UTR TCA 72 bp CAAAGACCTTTCTTCAGTATTCGAAGGTCACTGTCTTaGCCCGCAGGTACTCGTTCAGAGCCGCCTCTCCTA +
Preference number: 3 (lower is better)
Translates to: QRPFFSIRRSLS*PAGTRSEPPLL
Trigger: TAGGAGAGGCGGCTCTGAACGAGTACCTGCGGGTCAAGACAGTGACCTTCGAATACTGAAGAAAGGTCTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR TCA 72 bp TTCTTTGTATTCAGTTCTCTGTTAGAGCCTCTGGTGTaGTGTTTGGGCCCTGACTGGACTGGCTCTCCTCTC +
Preference number: 3 (lower is better)
Translates to: FFVFSSLLEPLV*CLGPDWTGSPL
Trigger: GAGAGGAGAGCCAGTCCAGTCAGGGCCCAAACATCACACCAGAGGCTCTAACAGAGAACTGAATACAAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000511283.2
3UTR-3UTR CAA 90 bp CTCCTTGGCTATGAACATGTGGTCTTCCACGTCTGTGAAAACAGTTGGCTCAAACCGAAGGACTCCTCCTaGGCTATGAACATGTGGTCT +
Preference number: 3 (lower is better)
Translates to: LLGYEHVVFHVCENSWLKPKDSS*AMNMWS
Trigger: AGACCACATGTTCATAGCCAAGGAGGAGTCCTTCGG...TTTGAGCCAACTGTTTTCACAGACGTGGAAGACCACATGTTCATAGCCAAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR-3UTR CAA 90 bp GCAGGGACTTTCTTCTCACAAAGACCTTTCTTCAGTATTCGAAGGTCACTGTCTATGCAATTCTCTCCTTaGTTGAAGAAAACAGAACTC +
Preference number: 3 (lower is better)
Translates to: AGTFFSQRPFFSIRRSLSMQFSP*LKKTEL
Trigger: GAGTTCTGTTTTCTTCAACAAAGGAGAGAATTGCAT...AGACAGTGACCTTCGAATACTGAAGAAAGGTCTTTGTGAGAAGAAAGTCCCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp GGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGACCGCGCGCAGGAGTTaGTGCGGGCGTCCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: GGRCCAPRLKREGAPATRTARRS*CGRPGQ
Trigger: CTGCCCGGGACGCCCGCACCAACTCCTGCGCGCGGT...CCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
CDS-3UTR GCA 90 bp GTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGGGCCGAGGCCCCTCGGTaGCTAGGGAGCAGTGACGGG +
Preference number: 4 (lower is better)
Translates to: VGGAVHPGSRGRGPQPRGAEAPR*LGSSDG
Trigger: CCCGTCACTGCTCCCTAGGCACCGAGGGGCCTCGGC...CCCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGGCCCGGTCCCGCGCACTaGTCTTCCCCCACCGTCCAT +
Preference number: 4 (lower is better)
Translates to: VGGAVHPGSRGRGPQPRGPGPAH*SSPTVH
Trigger: ATGGACGGTGGGGGAAGATCAGTGCGCGGGACCGGG...CCCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGCCCGGTCCCGCGCACTaGTCTTCCCCCACCGTCCAT +
Preference number: 4 (lower is better)
Translates to: GGRCCAPRLKREGAPATRPGPAH*SSPTVH
Trigger: ATGGACGGTGGGGGAAGATCAGTGCGCGGGACCGGG...CCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGCCGCGGATCCAGTTGTaGATGGCCTCTGCCGGCTGG +
Preference number: 4 (lower is better)
Translates to: GGRCCAPRLKREGAPATRPRIQL*MASAGW
Trigger: CCAGCCGGCAGAGGCCATTCACAACTGGATCCGCGG...CCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGGAGAAGGGCAGGACGTTaGGCTCGGCCCCCAAAGCCT +
Preference number: 4 (lower is better)
Translates to: VGGAVHPGSRGRGPQPRGRRAGR*ARPPKP
Trigger: AGGCTTTGGGGGCCGAGCTCAACGTCCTGCCCTTCT...CCCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGAGAAGGGCAGGACGTTaGGCTCGGCCCCCAAAGCCT +
Preference number: 4 (lower is better)
Translates to: GGRCCAPRLKREGAPATRRRAGR*ARPPKP
Trigger: AGGCTTTGGGGGCCGAGCTCAACGTCCTGCCCTTCT...CCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGGCCAAGGGCTGCTTCTaGCTGGACAGAGGGCGTCCA +
Preference number: 4 (lower is better)
Translates to: GGRCCAPRLKREGAPATRAKGCF*LDRGRP
Trigger: TGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGC...CCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp AGGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGCTTCTGCCCGCCCAGTaGCTACCCGCCTCTCCGAGA +
Preference number: 4 (lower is better)
Translates to: RWEVLCTQAQEGGGPSHELLPAQ*LPASPR
Trigger: TCTCGGAGAGGCGGGTAGGCACTGGGCGGGCAGAAG...CTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273450.7
CDS-3UTR GCA 90 bp GTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGGCTTGGCTGCGGCCACTaGCTTGTCGACGTCGGTGAC +
Preference number: 4 (lower is better)
Translates to: VGGAVHPGSRGRGPQPRGLGCGH*LVDVGD
Trigger: GTCACCGACGTCGACAAGGCAGTGGCCGCAGCCAAG...CCCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp AGGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGCCCCCAGGTGGGAGGTaGTGTGCACCCAGGCTCAAG +
Preference number: 4 (lower is better)
Translates to: RWEVLCTQAQEGGGPSHEPPGGR*CAPRLK
Trigger: CTTGAGCCTGGGTGCACAGCACCTCCCACCTGGGGG...CTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGCAGGCTGAGGGAGTCTaGGGGCTTTGCCCTCAGCGA +
Preference number: 4 (lower is better)
Translates to: GGRCCAPRLKREGAPATRQAEGV*GLCPQR
Trigger: TCGCTGAGGGCAAAGCCCCCAGACTCCCTCAGCCTG...CCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGGTGGCCGATGGGCTCCTaGGATGGGCAAAGCGTCTCC +
Preference number: 4 (lower is better)
Translates to: VGGAVHPGSRGRGPQPRGWPMGS*DGQSVS
Trigger: GGAGACGCTTTGCCCATCCCAGGAGCCCATCGGCCA...CCCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGTGGCCGATGGGCTCCTaGGATGGGCAAAGCGTCTCC +
Preference number: 4 (lower is better)
Translates to: GGRCCAPRLKREGAPATRWPMGS*DGQSVS
Trigger: GGAGACGCTTTGCCCATCCCAGGAGCCCATCGGCCA...CCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGACCACCCCTGGCCGATaGGCTCCTGGGATGGGCAAA +
Preference number: 4 (lower is better)
Translates to: GGRCCAPRLKREGAPATRTTPGR*APGMGK
Trigger: TTTGCCCATCCCAGGAGCCCATCGGCCAGGGGTGGT...CCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp TCCCGGCACCTTGTCGTTCCCGCGGATCCAGTTGTGAATGGCCTCTGCCGGCTGACCGCGCGCAGGAGTTaGTGCGGGCGTCCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: SRHLVVPADPVVNGLCRLTARRS*CGRPGQ
Trigger: CTGCCCGGGACGCCCGCACCAACTCCTGCGCGCGGT...CAGCCGGCAGAGGCCATTCACAACTGGATCCGCGGGAACGACAAGGTGCCGGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000493803.5
CDS-3UTR CCA 90 bp GGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGCCAGGAGCCACGTTGTaGGGTCTGCTATCCGGCCTC +
Preference number: 4 (lower is better)
Translates to: GGRCCAPRLKREGAPATRPGATL*GLLSGL
Trigger: GAGGCCGGATAGCAGACCCCACAACGTGGCTCCTGG...CCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472186.5
CDS-3UTR TCA 90 bp GGCTGCGGCCACTGCCTTGTCGACGTCGGTGACTTGGGCCAGGGATACCTGGCACCCGGTCCCGCGCACTaGTCTTCCCCCACCGTCCAT +
Preference number: 4 (lower is better)
Translates to: GCGHCLVDVGDLGQGYLAPGPAH*SSPTVH
Trigger: ATGGACGGTGGGGGAAGATCAGTGCGCGGGACCGGG...TGCCAGGTATCCCTGGCCCAAGTCACCGACGTCGACAAGGCAGTGGCCGCAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR GCA 90 bp GGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGAGCGGTTGTACAGCGTaGTCACGGTGTCGTCCGGGA +
Preference number: 4 (lower is better)
Translates to: GGRCCAPRLKREGAPATRSGCTA*SRCRPG
Trigger: TCCCGGACGACACCGTGAGCACGCTGTACAACCGCT...CCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp GGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGTTGGGGAGGATCCGCTaGCAAACACTCCGCACAGCC +
Preference number: 4 (lower is better)
Translates to: GGRCCAPRLKREGAPATRLGRIR*QTLRTA
Trigger: GGCTGTGCGGAGTGTTTGGCAGCGGATCCTCCCCAA...CCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp GTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGGTTGGGGAGGATCCGCTaGCAAACACTCCGCACAGCC +
Preference number: 4 (lower is better)
Translates to: VGGAVHPGSRGRGPQPRGLGRIR*QTLRTA
Trigger: GGCTGTGCGGAGTGTTTGGCAGCGGATCCTCCCCAA...CCCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGGCCAATGAAGAGCTGGTaGGGCATGCGGACAGTGCGC +
Preference number: 4 (lower is better)
Translates to: VGGAVHPGSRGRGPQPRGPMKSW*GMRTVR
Trigger: GCGCACTGTCCGCATGCCCCACCAGCTCTTCATTGG...CCCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGTGGTCTCAGAGGTCTTaGCGCCCTCGGCATCCACGA +
Preference number: 4 (lower is better)
Translates to: GGRCCAPRLKREGAPATRWSQRS*RPRHPR
Trigger: TCGTGGATGCCGAGGGCGCCAAGACCTCTGAGACCA...CCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGTCGACGTCGGTGACTTaGGCCAGGGATACCTGGCAG +
Preference number: 4 (lower is better)
Translates to: GGRCCAPRLKREGAPATRSTSVT*ARDTWQ
Trigger: CTGCCAGGTATCCCTGGCCCAAGTCACCGACGTCGA...CCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGCATCCAGGGCCTCAATaGTGGCCAGCTCCTCCTGGT +
Preference number: 4 (lower is better)
Translates to: GGRCCAPRLKREGAPATRHPGPQ*WPAPPG
Trigger: ACCAGGAGGAGCTGGCCACCATTGAGGCCCTGGATG...CCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGCGGTTGGGTCTGGCCTaGTTGATGGGGATGGTGGAG +
Preference number: 4 (lower is better)
Translates to: GGRCCAPRLKREGAPATRRLGLA*LMGMVE
Trigger: CTCCACCATCCCCATCAACCAGGCCAGACCCAACCG...CCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGGCCACCGGGAGTACTTaGATACCGGCACTCCATCCT +
Preference number: 4 (lower is better)
Translates to: GGRCCAPRLKREGAPATRATGST*IPALHP
Trigger: AGGATGGAGTGCCGGTATTCAAGTACTCCCGGTGGC...CCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGGTGAGTGGGGTCACCTaGGCAGGCTTGATCACCACT +
Preference number: 4 (lower is better)
Translates to: GGRCCAPRLKREGAPATRVSGVT*AGLITT
Trigger: AGTGGTGATCAAGCCTGCTCAGGTGACCCCACTCAC...CCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp TTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGACTGGAGTGCCCGCGGGGCCTaGGCTCTCGATAGCGGGGCC +
Preference number: 4 (lower is better)
Translates to: LFSLGGAHLTQPRAASDWSARGA*ALDSGA
Trigger: GGCCCCGCTATCGAGAGCTCAGGCCCCGCGGGCACT...CCAGTCAGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000472186.5
CDS-3UTR GCA 90 bp GTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGGACCTCACACTCCTTCTaGAGCAGCAGGTCTCCGGTG +
Preference number: 4 (lower is better)
Translates to: VGGAVHPGSRGRGPQPRGTSHSF*SSRSPV
Trigger: CACCGGAGACCTGCTGCTGCAGAAGGAGTGTGAGGT...CCCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp AGGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGGAGTCTGGGGGCTTTaGCCTCAGCGATCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: RWEVLCTQAQEGGGPSHEGVWGL*PQRSAS
Trigger: TGAGGCTGATCGCTGAGGGCAAAGCCCCCAGACTCC...CTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp AGGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGTTGGGGAGGATCCGCTaGCAAACACTCCGCACAGCC +
Preference number: 4 (lower is better)
Translates to: RWEVLCTQAQEGGGPSHELGRIR*QTLRTA
Trigger: GGCTGTGCGGAGTGTTTGGCAGCGGATCCTCCCCAA...CTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp GGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGAGGTCTGGATGGACATaGCCACGTGGGTCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: GGRCCAPRLKREGAPATRRSGWT*PRGSSG
Trigger: CCCTGAAGACCCACGTGGGCATGTCCATCCAGACCT...CCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000472186.5
CDS-3UTR GCA 90 bp CCCAAAGAGGATGAGTCCTGCTTTGGTGACCACCCCTGGCCGATGGGCTCCTGGGCGCGCAGGAGTTGGTaGGGGCGTCCCGGGCAGGTT +
Preference number: 4 (lower is better)
Translates to: PKEDESCFGDHPWPMGSWARRSW*GRPGQV
Trigger: AACCTGCCCGGGACGCCCGCACCAACTCCTGCGCGC...CCAGGAGCCCATCGGCCAGGGGTGGTCACCAAAGCAGGACTCATCCTCTTTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000493803.5
CDS-3UTR CCA 90 bp GTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGGAGCGGAAGGTCTGGATaGACATGCCCACGTGGGTCT +
Preference number: 4 (lower is better)
Translates to: VGGAVHPGSRGRGPQPRGSGRSG*TCPRGS
Trigger: AGACCCACGTGGGCATGTCCATCCAGACCTTCCGCT...CCCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGGGGGATGGTGGAGCCCTaGATCTTGTCACACCAGCCA +
Preference number: 4 (lower is better)
Translates to: VGGAVHPGSRGRGPQPRGGMVEP*ILSHQP
Trigger: TGGCTGGTGTGACAAGATCCAGGGCTCCACCATCCC...CCCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCAC
67% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGCAGGGAGCCAGATCCTaGGAGGACGTTAACCACACC +
Preference number: 4 (lower is better)
Translates to: GGRCCAPRLKREGAPATRQGARS*EDVNHT
Trigger: GGTGTGGTTAACGTCCTCCCAGGATCTGGCTCCCTG...CCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGGCAGGGAGCCAGATCCTaGGAGGACGTTAACCACACC +
Preference number: 4 (lower is better)
Translates to: VGGAVHPGSRGRGPQPRGQGARS*EDVNHT
Trigger: GGTGTGGTTAACGTCCTCCCAGGATCTGGCTCCCTG...CCCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp CTGAGGGAGTCTGGGGGCTTTGCCCTCAGCGATCAGCCTCACGGCCTGCACCATGGTGCAGACCCGTCCTaGGAGCCAGGAGGTGGGACC +
Preference number: 4 (lower is better)
Translates to: LRESGGFALSDQPHGLHHGADPS*EPGGGT
Trigger: GGTCCCACCTCCTGGCTCCCAGGACGGGTCTGCACC...ATGGTGCAGGCCGTGAGGCTGATCGCTGAGGGCAAAGCCCCCAGACTCCCTCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493803.5
CDS-3UTR CCA 90 bp CAGGATGGTCTGAGAGTCTCTGGCCGACCAGGGAGCCAGATCCTGGGAGGACGTGGCGGCGCTCACCGGTaGTGGGACTATGGCGGGAGC +
Preference number: 4 (lower is better)
Translates to: QDGLRVSGRPGSQILGGRGGAHR*WDYGGS
Trigger: GCTCCCGCCATAGTCCCACCACCGGTGAGCGCCGCC...ACGTCCTCCCAGGATCTGGCTCCCTGGTCGGCCAGAGACTCTCAGACCATCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455064.6
CDS-3UTR TCA 90 bp AGGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGCCACCGGGAGTACTTaGATACCGGCACTCCATCCT +
Preference number: 4 (lower is better)
Translates to: RWEVLCTQAQEGGGPSHEATGST*IPALHP
Trigger: AGGATGGAGTGCCGGTATTCAAGTACTCCCGGTGGC...CTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp CCGAGGGACCTGATTCCCGCCGCAGACCAGTGTGGCCCCTTCCTTCACGCCATGAGAAGGGCAGGACGTTaGGCTCGGCCCCCAAAGCCT +
Preference number: 4 (lower is better)
Translates to: PRDLIPAADQCGPFLHAMRRAGR*ARPPKP
Trigger: AGGCTTTGGGGGCCGAGCTCAACGTCCTGCCCTTCT...CATGGCGTGAAGGAAGGGGCCACACTGGTCTGCGGCGGGAATCAGGTCCCTCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR TCA 90 bp GTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGGGTGCCTAGGGAGCAGTaGCGGGTGATAGATGATGGA +
Preference number: 4 (lower is better)
Translates to: VGGAVHPGSRGRGPQPRGVPREQ*RVIDDG
Trigger: TCCATCATCTATCACCCGTCACTGCTCCCTAGGCAC...CCCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGAAAGATGATGAGGGGTaGCTTCCCGCCCAGTTCCAG +
Preference number: 4 (lower is better)
Translates to: GGRCCAPRLKREGAPATRKDDEG*LPAQFQ
Trigger: CTGGAACTGGGCGGGAAGTCACCCCTCATCATCTTT...CCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGCGAAGGTCACTGTCTTaGCCCGCAGGTACTCGTTCA +
Preference number: 4 (lower is better)
Translates to: GGRCCAPRLKREGAPATRRRSLS*PAGTRS
Trigger: TGAACGAGTACCTGCGGGTCAAGACAGTGACCTTCG...CCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp AGGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGCAGGTTAGACTTCTGTaGGCCGCAGCCCCGAAACTG +
Preference number: 4 (lower is better)
Translates to: RWEVLCTQAQEGGGPSHEQVRLL*AAAPKL
Trigger: CAGTTTCGGGGCTGCGGCTCACAGAAGTCTAACCTG...CTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
CDS-3UTR GCA 90 bp AGGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGAGCGAAAGGAGACGCTaGCCTCCGGGAATTTGCAGC +
Preference number: 4 (lower is better)
Translates to: RWEVLCTQAQEGGGPSHESERRR*PPGICS
Trigger: GCTGCAAATTCCCGGAGGGCAGCGTCTCCTTTCGCT...CTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273450.7
CDS-3UTR GCA 90 bp GGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGGTTGTGAATGGCCTCTaGCGGCTGGTCCCAGTTGAT +
Preference number: 4 (lower is better)
Translates to: GGRCCAPRLKREGAPATRVVNGL*RLVPVD
Trigger: ATCAACTGGGACCAGCCGGCAGAGGCCATTCACAAC...CCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp GGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGCGCAGTAACCAGCTCTaGCTCTGTCAGCTCAAGGAC +
Preference number: 4 (lower is better)
Translates to: GGRCCAPRLKREGAPATRRSNQL*LCQLKD
Trigger: GTCCTTGAGCTGACAGAGGCAGAGCTGGTTACTGCG...CCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp GTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGGGGGGCATGCGGACAGTaGGCTTGTTCACTGCCATTT +
Preference number: 4 (lower is better)
Translates to: VGGAVHPGSRGRGPQPRGGACGQ*ACSLPF
Trigger: AAATGGCAGTGAACAAGCGCACTGTCCGCATGCCCC...CCCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCAC
66% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp GGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCGCGCGCAGGAGTTGGTaGGGGCGTCCCGGGCAGGTT +
Preference number: 4 (lower is better)
Translates to: GLLLTGQRASKMQTWCAGARRSW*GRPGQV
Trigger: AACCTGCCCGGGACGCCCGCACCAACTCCTGCGCGC...GCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
CDS-3UTR CCA 90 bp GGGAGTCTGGGGGCTTTGCCCTCAGCGATCAGCCTCACGGCCTGCACCATCCCTACCACCCCTGGCCGATaGGCTCCTGGGATGGGCAAA +
Preference number: 4 (lower is better)
Translates to: GSLGALPSAISLTACTIPTTPGR*APGMGK
Trigger: TTTGCCCATCCCAGGAGCCCATCGGCCAGGGGTGGT...AGGGATGGTGCAGGCCGTGAGGCTGATCGCTGAGGGCAAAGCCCCCAGACTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000493803.5
CDS-3UTR CCA 90 bp GGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGCAACCTCCAGGACTTTaGGGAGGATCCGCTGCCAAA +
Preference number: 4 (lower is better)
Translates to: GGRCCAPRLKREGAPATRQPPGL*GGSAAK
Trigger: TTTGGCAGCGGATCCTCCCCAAAGTCCTGGAGGTTG...CCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GGCAGGTACATGTTGGGCTCCCACCTGTACATCAGCCGGCCCCGGTCCCGCGCATGGTCTCAGAGGTCTTaGCGCCCTCGGCATCCACGA +
Preference number: 4 (lower is better)
Translates to: GRYMLGSHLYISRPRSRAWSQRS*RPRHPR
Trigger: TCGTGGATGCCGAGGGCGCCAAGACCTCTGAGACCA...TGCGCGGGACCGGGGCCGGCTGATGTACAGGTGGGAGCCCAACATGTACCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR CCA 90 bp GTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGGTGGGCCAGGGATACCTaGCAGATGACACTTCCATCG +
Preference number: 4 (lower is better)
Translates to: VGGAVHPGSRGRGPQPRGWARDT*QMTLPS
Trigger: CGATGGAAGTGTCATCTGCCAGGTATCCCTGGCCCA...CCCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp AGGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGAGCGGAAGGTCTGGATaGACATGCCCACGTGGGTCT +
Preference number: 4 (lower is better)
Translates to: RWEVLCTQAQEGGGPSHESGRSG*TCPRGS
Trigger: AGACCCACGTGGGCATGTCCATCCAGACCTTCCGCT...CTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000472186.5
CDS-3UTR CCA 90 bp AGGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGCAGGGAGCCAGATCCTaGGAGGACGTTAACCACACC +
Preference number: 4 (lower is better)
Translates to: RWEVLCTQAQEGGGPSHEQGARS*EDVNHT
Trigger: GGTGTGGTTAACGTCCTCCCAGGATCTGGCTCCCTG...CTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGCAAATTCCGTGGCATTaGCCCGAGACAGCACGGCAT +
Preference number: 4 (lower is better)
Translates to: GGRCCAPRLKREGAPATRQIPWH*PETARH
Trigger: ATGCCGTGCTGTCTCGGGCCAATGCCACGGAATTTG...CCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGTCCAAGATGCAGACATaGTGTGCAGGCAGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: GGRCCAPRLKREGAPATRSKMQT*CAGRRA
Trigger: AGCCCTCCTGCCTGCACACCATGTCTGCATCTTGGA...CCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGAGGGCTGCTTCTGACTaGACAGAGGGCGTCCAAGAT +
Preference number: 4 (lower is better)
Translates to: GGRCCAPRLKREGAPATRRAASD*TEGVQD
Trigger: ATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCT...CCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGGAGGGCTGCTTCTGACTaGACAGAGGGCGTCCAAGAT +
Preference number: 4 (lower is better)
Translates to: VGGAVHPGSRGRGPQPRGRAASD*TEGVQD
Trigger: ATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCT...CCCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTACCGCGCGCAGGAGTTaGTGCGGGCGTCCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: EALFSLGGAHLTQPRAASTARRS*CGRPGQ
Trigger: CTGCCCGGGACGCCCGCACCAACTCCTGCGCGCGGT...AGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
CDS-3UTR TCA 90 bp GGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGCCTTGTCTGGAACAGTaGACACACCCACCACTTCGT +
Preference number: 4 (lower is better)
Translates to: GGRCCAPRLKREGAPATRPCLEQ*THPPLR
Trigger: ACGAAGTGGTGGGTGTGTTCACTGTTCCAGACAAGG...CCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp ATCCTTGGCTGCGGCCACTGCCTTGTCGACGTCGGTGACTTGGGCCAGGGATACCCGCGGATCCAGTTGTaGATGGCCTCTGCCGGCTGG +
Preference number: 4 (lower is better)
Translates to: ILGCGHCLVDVGDLGQGYPRIQL*MASAGW
Trigger: CCAGCCGGCAGAGGCCATTCACAACTGGATCCGCGG...GTATCCCTGGCCCAAGTCACCGACGTCGACAAGGCAGTGGCCGCAGCCAAGGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR TCA 90 bp GGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGACGCGGCCCCTGACTTaGAGAAATCAGTGGAGTCTT +
Preference number: 4 (lower is better)
Translates to: GGRCCAPRLKREGAPATRTRPLT*RNQWSL
Trigger: AAGACTCCACTGATTTCTTCAAGTCAGGGGCCGCGT...CCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp TTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGACTGGCCCGGTCCCGCGCACTaGTCTTCCCCCACCGTCCAT +
Preference number: 4 (lower is better)
Translates to: LFSLGGAHLTQPRAASDWPGPAH*SSPTVH
Trigger: ATGGACGGTGGGGGAAGATCAGTGCGCGGGACCGGG...CCAGTCAGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGCCTCTGTGGAGCCTGTaGACCCGATTTTCCTCACAT +
Preference number: 4 (lower is better)
Translates to: GGRCCAPRLKREGAPATRPLWSL*TRFSSH
Trigger: ATGTGAGGAAAATCGGGTTCACAGGCTCCACAGAGG...CCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCCCTGGCCGAGGGACCTaGTTCCCGCCGCAGACCAGT +
Preference number: 4 (lower is better)
Translates to: GLLLTGQRASKMQTWCAGPGRGT*FPPQTS
Trigger: ACTGGTCTGCGGCGGGAATCAGGTCCCTCGGCCAGG...GCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp AGGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGCGAAGGTCACTGTCTTaGCCCGCAGGTACTCGTTCA +
Preference number: 4 (lower is better)
Translates to: RWEVLCTQAQEGGGPSHERRSLS*PAGTRS
Trigger: TGAACGAGTACCTGCGGGTCAAGACAGTGACCTTCG...CTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp TCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTGCCGAGGCCCCTCGGTaGCTAGGGAGCAGTGACGGG +
Preference number: 4 (lower is better)
Translates to: SEALFSLGGAHLTQPRAAAEAPR*LGSSDG
Trigger: CCCGTCACTGCTCCCTAGGCACCGAGGGGCCTCGGC...AGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp GAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGCCGAGGCCCCTCGGTaGCTAGGGAGCAGTGACGGG +
Preference number: 4 (lower is better)
Translates to: EALFSLGGAHLTQPRAASAEAPR*LGSSDG
Trigger: CCCGTCACTGCTCCCTAGGCACCGAGGGGCCTCGGC...AGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp CTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGGGCCGAGGCCCCTCGGTaGCTAGGGAGCAGTGACGGG +
Preference number: 4 (lower is better)
Translates to: LLLTGQRASKMQTWCAGRAEAPR*LGSSDG
Trigger: CCCGTCACTGCTCCCTAGGCACCGAGGGGCCTCGGC...CCTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp AGGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGCGCAGTAACCAGCTCTaGCTCTGTCAGCTCAAGGAC +
Preference number: 4 (lower is better)
Translates to: RWEVLCTQAQEGGGPSHERSNQL*LCQLKD
Trigger: GTCCTTGAGCTGACAGAGGCAGAGCTGGTTACTGCG...CTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp AGGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGGGGCATGCGGACAGTaGGCTTGTTCACTGCCATTT +
Preference number: 4 (lower is better)
Translates to: RWEVLCTQAQEGGGPSHEGACGQ*ACSLPF
Trigger: AAATGGCAGTGAACAAGCGCACTGTCCGCATGCCCC...CTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp GTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGGCTGCTCCATGAGATCTaGCAACCTGTACATCAGCCG +
Preference number: 4 (lower is better)
Translates to: VGGAVHPGSRGRGPQPRGLLHEI*QPVHQP
Trigger: CGGCTGATGTACAGGTTGGCAGATCTCATGGAGCAG...CCCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000472186.5
CDS-3UTR GCA 90 bp GGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGGACAAACACAGTGCCTaGCTGGAGCTTGTCACTGAC +
Preference number: 4 (lower is better)
Translates to: GGRCCAPRLKREGAPATRDKHSA*LELVTD
Trigger: GTCAGTGACAAGCTCCAGGCAGGCACTGTGTTTGTC...CCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp TTCCCAAAGAGGATGAGTCCTGCTTTGGTGACCACCCCTGGCCGATGGGCTCCTGCGCGCAGGAGTTGGTaGGGGCGTCCCGGGCAGGTT +
Preference number: 4 (lower is better)
Translates to: FPKRMSPALVTTPGRWAPARRSW*GRPGQV
Trigger: AACCTGCCCGGGACGCCCGCACCAACTCCTGCGCGC...AGGAGCCCATCGGCCAGGGGTGGTCACCAAAGCAGGACTCATCCTCTTTGGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000493803.5
CDS-3UTR CCA 90 bp AGGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGTCTCAAAGGCATCCTTaGCTGCGGCCACTGCCTTGT +
Preference number: 4 (lower is better)
Translates to: RWEVLCTQAQEGGGPSHESQRHP*LRPLPC
Trigger: ACAAGGCAGTGGCCGCAGCCAAGGATGCCTTTGAGA...CTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp AGGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGAAGCTTTATTCTCCCTaGGAGGGGCACACCTCACCC +
Preference number: 4 (lower is better)
Translates to: RWEVLCTQAQEGGGPSHEKLYSP*EGHTSP
Trigger: GGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTT...CTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp TTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGACTGGGGTGCAGACCCGTCCTaGGAGCCAGGAGGTGGGACC +
Preference number: 4 (lower is better)
Translates to: LFSLGGAHLTQPRAASDWGADPS*EPGGGT
Trigger: GGTCCCACCTCCTGGCTCCCAGGACGGGTCTGCACC...CCAGTCAGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
CDS-3UTR CCA 90 bp CGCAGACCAGTGTGGCCCCTTCCTTCACGCCATGCTGGCAGTACTCCATCAGCTGGTGCAGACCCGTCCTaGGAGCCAGGAGGTGGGACC +
Preference number: 4 (lower is better)
Translates to: RRPVWPLPSRHAGSTPSAGADPS*EPGGGT
Trigger: GGTCCCACCTCCTGGCTCCCAGGACGGGTCTGCACC...AGCTGATGGAGTACTGCCAGCATGGCGTGAAGGAAGGGGCCACACTGGTCTGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455064.6
CDS-3UTR CCA 90 bp GCCACTGCCCAGAAGCTGATGGTGGCAGTGGCTGGCAGGTACATGTTGGGCTCCAGTGCTTTGTCTGCCTaGGAGGCCCAGCCTGCGCCC +
Preference number: 4 (lower is better)
Translates to: ATAQKLMVAVAGRYMLGSSALSA*EAQPAP
Trigger: GGGCGCAGGCTGGGCCTCCCAGGCAGACAAAGCACT...GGAGCCCAACATGTACCTGCCAGCCACTGCCACCATCAGCTTCTGGGCAGTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR CAA 72 bp CAGAAGCTGATGGTGGCAGTGGCTGGCAGGTACATGTaGGGCTCCCACCTGTACATCAGCCGGCCCCGGTCC +
Preference number: 4 (lower is better)
Translates to: QKLMVAVAGRYM*GSHLYISRPRS
Trigger: GGACCGGGGCCGGCTGATGTACAGGTGGGAGCCCAACATGTACCTGCCAGCCACTGCCACCATCAGCTTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR CAA 72 bp GCTTTGTCTGCCTGGGAGGCCCAGCCTGCGCCCACTTaGGAAGCATCCCTTGGCTTCCGCACCTCCTCACCT +
Preference number: 4 (lower is better)
Translates to: ALSAWEAQPAPT*EASLGFRTSSP
Trigger: AGGTGAGGAGGTGCGGAAGCCAAGGGATGCTTCCAAAGTGGGCGCAGGCTGGGCCTCCCAGGCAGACAAAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR TCA 90 bp CCCAAAGAGGATGAGTCCTGCTTTGGTGACCACCCCTGGCCGATGGGCTCCTGGAGAAGGGCAGGACGTTaGGCTCGGCCCCCAAAGCCT +
Preference number: 4 (lower is better)
Translates to: PKEDESCFGDHPWPMGSWRRAGR*ARPPKP
Trigger: AGGCTTTGGGGGCCGAGCTCAACGTCCTGCCCTTCT...CCAGGAGCCCATCGGCCAGGGGTGGTCACCAAAGCAGGACTCATCCTCTTTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR TCA 90 bp TTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGACTGGCCGCGGATCCAGTTGTaGATGGCCTCTGCCGGCTGG +
Preference number: 4 (lower is better)
Translates to: LFSLGGAHLTQPRAASDWPRIQL*MASAGW
Trigger: CCAGCCGGCAGAGGCCATTCACAACTGGATCCGCGG...CCAGTCAGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGGTTGCCATCCTCCAGCTaGATATTCTTCACCAGCAGC +
Preference number: 4 (lower is better)
Translates to: VGGAVHPGSRGRGPQPRGLPSSS*IFFTSS
Trigger: GCTGCTGGTGAAGAATATTCAGCTGGAGGATGGCAA...CCCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp AGGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGACGCGGCCCCTGACTTaGAGAAATCAGTGGAGTCTT +
Preference number: 4 (lower is better)
Translates to: RWEVLCTQAQEGGGPSHETRPLT*RNQWSL
Trigger: AAGACTCCACTGATTTCTTCAAGTCAGGGGCCGCGT...CTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGGTCACTAACAGCTGGATaGAGTCCCCAAAGGTGGATG +
Preference number: 4 (lower is better)
Translates to: VGGAVHPGSRGRGPQPRGSLTAG*SPQRWM
Trigger: CATCCACCTTTGGGGACTTCATCCAGCTGTTAGTGA...CCCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGCCCGGTCCCGCGCACTaGTCTTCCCCCACCGTCCAT +
Preference number: 4 (lower is better)
Translates to: AASDWTEGVQDADMVCRQPGPAH*SSPTVH
Trigger: ATGGACGGTGGGGGAAGATCAGTGCGCGGGACCGGG...CTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp TCCCTGGTGAAGACACCAGAAGCCAGGCCAAATTCCGTGGCATTGGCCCGAGACCCTGGCCGAGGGACCTaGTTCCCGCCGCAGACCAGT +
Preference number: 4 (lower is better)
Translates to: SLVKTPEARPNSVALARDPGRGT*FPPQTS
Trigger: ACTGGTCTGCGGCGGGAATCAGGTCCCTCGGCCAGG...GTCTCGGGCCAATGCCACGGAATTTGGCCTGGCTTCTGGTGTCTTCACCAGGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR TCA 90 bp GCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGCCTGGCCGAGGGACCTaGTTCCCGCCGCAGACCAGT +
Preference number: 4 (lower is better)
Translates to: AASDWTEGVQDADMVCRQPGRGT*FPPQTS
Trigger: ACTGGTCTGCGGCGGGAATCAGGTCCCTCGGCCAGG...CTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp TTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCCCTGGCCGAGGGACCTaGTTCCCGCCGCAGACCAGT +
Preference number: 4 (lower is better)
Translates to: FRSFILPGRGTPHPAKGCPGRGT*FPPQTS
Trigger: ACTGGTCTGCGGCGGGAATCAGGTCCCTCGGCCAGG...GCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp CAGCCAAGGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGCCTGGCCGAGGGACCTaGTTCCCGCCGCAGACCAGT +
Preference number: 4 (lower is better)
Translates to: QPRAASDWTEGVQDADMVPGRGT*FPPQTS
Trigger: ACTGGTCTGCGGCGGGAATCAGGTCCCTCGGCCAGG...CACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp CTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGGCCTGGCCGAGGGACCTaGTTCCCGCCGCAGACCAGT +
Preference number: 4 (lower is better)
Translates to: LLLTGQRASKMQTWCAGRPGRGT*FPPQTS
Trigger: ACTGGTCTGCGGCGGGAATCAGGTCCCTCGGCCAGG...CCTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTCCGCGGATCCAGTTGTaGATGGCCGAGGCCCCTCGG +
Preference number: 4 (lower is better)
Translates to: EALFSLGGAHLTQPRAASPRIQL*MAEAPR
Trigger: CCGAGGGGCCTCGGCCATTCACAACTGGATCCGCGG...AGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452905.6
CDS-3UTR TCA 90 bp GGGAGTCTGGGGGCTTTGCCCTCAGCGATCAGCCTCACGGCCTGCACCATCCCTCTGAGAAGCCTTTTCTaGGCCTCAGGCAAGGAGCCC +
Preference number: 4 (lower is better)
Translates to: GSLGALPSAISLTACTIPLRSLF*ASGKEP
Trigger: GGGCTCCTTGCCTGAGGCTCAGAAAAGGCTTCTCAG...AGGGATGGTGCAGGCCGTGAGGCTGATCGCTGAGGGCAAAGCCCCCAGACTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR GCA 90 bp GGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCCGGCCCCTTAGCAGCTaGGCATCCGGGTGGATAGCG +
Preference number: 4 (lower is better)
Translates to: GLLLTGQRASKMQTWCAGRPLSS*ASGWIA
Trigger: CGCTATCCACCCGGATGCGCAGCTGCTAAGGGGCCG...GCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273450.7
CDS-3UTR GCA 90 bp GCCCTTGCTGTCTTCTGCGTGCAGGAGCTAAGTCCCCTCCAGCCCAGGCTGGTGAGCGGTTGTACAGCGTaGTCACGGTGTCGTCCGGGA +
Preference number: 4 (lower is better)
Translates to: ALAVFCVQELSPLQPRLVSGCTA*SRCRPG
Trigger: TCCCGGACGACACCGTGAGCACGCTGTACAACCGCT...CACCAGCCTGGGCTGGAGGGGACTTAGCTCCTGCACGCAGAAGACAGCAAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR GCA 90 bp TCACAGGCCTCTGTCCAGGCTCCCGGCACCTTGTCGTTCCCGCGGATCCAGTTGGGAGTCTGGGGGCTTTaGCCTCAGCGATCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: SQASVQAPGTLSFPRIQLGVWGL*PQRSAS
Trigger: TGAGGCTGATCGCTGAGGGCAAAGCCCCCAGACTCC...CAACTGGATCCGCGGGAACGACAAGGTGCCGGGAGCCTGGACAGAGGCCTGTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000493803.5
CDS-3UTR GCA 90 bp AGGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGAAAGAGGATGAGTCCTaGTTTGGTGACCACCCCTGG +
Preference number: 4 (lower is better)
Translates to: RWEVLCTQAQEGGGPSHEKEDES*FGDHPW
Trigger: CCAGGGGTGGTCACCAAAGCAGGACTCATCCTCTTT...CTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp GTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGGAAGGACACTGCTGGCTaGCCCCTTAAAGAAGTTCGA +
Preference number: 4 (lower is better)
Translates to: VGGAVHPGSRGRGPQPRGKDTAG*PLKEVR
Trigger: TCGAACTTCTTTAAGGGGGCAGCCAGCAGTGTCCTT...CCCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp CCATCAGCTTCACAAGGTGGGCATGGTGATTCTGCGGCCCGTGGTCGGTGTCCCCTTGGCTGCGGCCACTaGCTTGTCGACGTCGGTGAC +
Preference number: 4 (lower is better)
Translates to: PSASQGGHGDSAARGRCPLGCGH*LVDVGD
Trigger: GTCACCGACGTCGACAAGGCAGTGGCCGCAGCCAAG...GGGACACCGACCACGGGCCGCAGAATCACCATGCCCACCTTGTGAAGCTGATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR GCA 90 bp AGGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGCTGCTCCATGAGATCTaGCAACCTGTACATCAGCCG +
Preference number: 4 (lower is better)
Translates to: RWEVLCTQAQEGGGPSHELLHEI*QPVHQP
Trigger: CGGCTGATGTACAGGTTGGCAGATCTCATGGAGCAG...CTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000472186.5
CDS-3UTR GCA 90 bp GTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGGCAGCTTTTCATGATGTaGTTGCCCACCTCTGTGGAG +
Preference number: 4 (lower is better)
Translates to: VGGAVHPGSRGRGPQPRGQLFMM*LPTSVE
Trigger: CTCCACAGAGGTGGGCAAGCACATCATGAAAAGCTG...CCCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp GGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGCACAAAGAGTCGGCCTaGTGCAATGCAATTCTCTCC +
Preference number: 4 (lower is better)
Translates to: GGRCCAPRLKREGAPATRHKESA*CNAILS
Trigger: GGAGAGAATTGCATTGCAGCAGGCCGACTCTTTGTG...CCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp GTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGGCACAAAGAGTCGGCCTaGTGCAATGCAATTCTCTCC +
Preference number: 4 (lower is better)
Translates to: VGGAVHPGSRGRGPQPRGHKESA*CNAILS
Trigger: GGAGAGAATTGCATTGCAGCAGGCCGACTCTTTGTG...CCCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp ACATCAGGATGGTCTGAGAGTCTCTGGCCGACCAGGGAGCCAGATCCTGGGAGGCCCCCAGGTGGGAGGTaGTGTGCACCCAGGCTCAAG +
Preference number: 4 (lower is better)
Translates to: TSGWSESLWPTREPDPGRPPGGR*CAPRLK
Trigger: CTTGAGCCTGGGTGCACAGCACCTCCCACCTGGGGG...CCTCCCAGGATCTGGCTCCCTGGTCGGCCAGAGACTCTCAGACCATCCTGATGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR GCA 90 bp TCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCGCGCAGGAGTTGGTaGGGGCGTCCCGGGCAGGTT +
Preference number: 4 (lower is better)
Translates to: SSEALFSLGGAHLTQPRAARRSW*GRPGQV
Trigger: AACCTGCCCGGGACGCCCGCACCAACTCCTGCGCGC...AGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
CDS-3UTR GCA 90 bp AGGGAGTCTGGGGGCTTTGCCCTCAGCGATCAGCCTCACGGCCTGCACCATCCCGCCCTTGCTGTCTTCTaGGTGCAGGAGCTAAGTCCC +
Preference number: 4 (lower is better)
Translates to: RESGGFALSDQPHGLHHPALAVF*VQELSP
Trigger: GGGACTTAGCTCCTGCACGCAGAAGACAGCAAGGGC...GGGATGGTGCAGGCCGTGAGGCTGATCGCTGAGGGCAAAGCCCCCAGACTCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR GCA 90 bp GGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCCCTCTCCTAGGCAAGTaGCCGCGGGGCCTGAGCTCT +
Preference number: 4 (lower is better)
Translates to: GLLLTGQRASKMQTWCAGPLLGK*PRGLSS
Trigger: AGAGCTCAGGCCCCGCGGGCACTTGCCTAGGAGAGG...GCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472186.5
CDS-3UTR CCA 90 bp TTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGACTGGAGCTGCGCATCCGGGTaGATAGCGGCGCTTCTGCCC +
Preference number: 4 (lower is better)
Translates to: LFSLGGAHLTQPRAASDWSCASG*IAALLP
Trigger: GGGCAGAAGCGCCGCTATCCACCCGGATGCGCAGCT...CCAGTCAGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273450.7
CDS-3UTR CCA 90 bp CAGTTTCTGTTCACAGGCCTCTGTCCAGGCTCCCGGCACCTTGTCGTTCCCGCGCAGGCTGAGGGAGTCTaGGGGCTTTGCCCTCAGCGA +
Preference number: 4 (lower is better)
Translates to: QFLFTGLCPGSRHLVVPAQAEGV*GLCPQR
Trigger: TCGCTGAGGGCAAAGCCCCCAGACTCCCTCAGCCTG...CGCGGGAACGACAAGGTGCCGGGAGCCTGGACAGAGGCCTGTGAACAGAAACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000493803.5
CDS-3UTR CCA 90 bp CCTGTACATCAGCCGGCCCCGGTCCCGCGCACTGATCTTCCCCCACCGTCCATTATGGCCTCTGCCGGCTaGTCCCAGTTGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: PVHQPAPVPRTDLPPPSIMASAG*SQLILA
Trigger: AGCCAAGATCAACTGGGACCAGCCGGCAGAGGCCAT...AATGGACGGTGGGGGAAGATCAGTGCGCGGGACCGGGGCCGGCTGATGTACAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR CCA 90 bp ATTCCCGCCGCAGACCAGTGTGGCCCCTTCCTTCACGCCATGCTGGCAGTACTCTGGCCGATGGGCTCCTaGGATGGGCAAAGCGTCTCC +
Preference number: 4 (lower is better)
Translates to: IPAADQCGPFLHAMLAVLWPMGS*DGQSVS
Trigger: GGAGACGCTTTGCCCATCCCAGGAGCCCATCGGCCA...GAGTACTGCCAGCATGGCGTGAAGGAAGGGGCCACACTGGTCTGCGGCGGGAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp GTTTCTGTTCACAGGCCTCTGTCCAGGCTCCCGGCACCTTGTCGTTCCCGCGGATGGCCGATGGGCTCCTaGGATGGGCAAAGCGTCTCC +
Preference number: 4 (lower is better)
Translates to: VSVHRPLSRLPAPCRSRGWPMGS*DGQSVS
Trigger: GGAGACGCTTTGCCCATCCCAGGAGCCCATCGGCCA...TCCGCGGGAACGACAAGGTGCCGGGAGCCTGGACAGAGGCCTGTGAACAGAAAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000493803.5
CDS-3UTR CCA 90 bp TCACAGGCCTCTGTCCAGGCTCCCGGCACCTTGTCGTTCCCGCGGATCCAGTTGTTTGGTGACCACCCCTaGCCGATGGGCTCCTGGGAT +
Preference number: 4 (lower is better)
Translates to: SQASVQAPGTLSFPRIQLFGDHP*PMGSWD
Trigger: ATCCCAGGAGCCCATCGGCCAGGGGTGGTCACCAAA...CAACTGGATCCGCGGGAACGACAAGGTGCCGGGAGCCTGGACAGAGGCCTGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000493803.5
CDS-3UTR CCA 90 bp ATTCCCGCCGCAGACCAGTGTGGCCCCTTCCTTCACGCCATGCTGGCAGTACTCCGCCGCAGACCAGTGTaGCCCCTTCCTTCACGCCAT +
Preference number: 4 (lower is better)
Translates to: IPAADQCGPFLHAMLAVLRRRPV*PLPSRH
Trigger: ATGGCGTGAAGGAAGGGGCCACACTGGTCTGCGGCG...GAGTACTGCCAGCATGGCGTGAAGGAAGGGGCCACACTGGTCTGCGGCGGGAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp GTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGGAACACAGTGCCTGCCTaGAGCTTGTCACTGACATAC +
Preference number: 4 (lower is better)
Translates to: VGGAVHPGSRGRGPQPRGNTVPA*SLSLTY
Trigger: GTATGTCAGTGACAAGCTCCAGGCAGGCACTGTGTT...CCCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGGTGCAGACCCGTCCTaGGAGCCAGGAGGTGGGACC +
Preference number: 4 (lower is better)
Translates to: EALFSLGGAHLTQPRAASGADPS*EPGGGT
Trigger: GGTCCCACCTCCTGGCTCCCAGGACGGGTCTGCACC...AGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
CDS-3UTR CCA 90 bp GGGGTGACTTCCCGCCCAGTTCCAGGGACACCTTCTTCACGTTACTTATGGCACCCGGTGGTGGGACTATaGCGGGAGCGCAGCGCACCC +
Preference number: 4 (lower is better)
Translates to: GVTSRPVPGTPSSRYLWHPVVGL*RERSAP
Trigger: GGGTGCGCTGCGCTCCCGCCATAGTCCCACCACCGG...GTGCCATAAGTAACGTGAAGAAGGTGTCCCTGGAACTGGGCGGGAAGTCACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455064.6
CDS-3UTR CCA 90 bp CTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGGGGCGCTCACCGGTGGTaGGACTATGGCGGGAGCGCA +
Preference number: 4 (lower is better)
Translates to: LLLTGQRASKMQTWCAGRGAHRW*DYGGSA
Trigger: TGCGCTCCCGCCATAGTCCCACCACCGGTGAGCGCC...CCTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455064.6
CDS-3UTR CCA 90 bp GTGGACGGTCTCTCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCGGAGAGTCAGCCGAGTaGGGGCGGCGCTCACCGGTG +
Preference number: 4 (lower is better)
Translates to: VDGLSSEALFSLGGAHLTGESAE*GRRSPV
Trigger: CACCGGTGAGCGCCGCCCCCACTCGGCTGACTCTCC...GGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGAGAGACCGTCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455064.6
CDS-3UTR TCA 90 bp CGCAGACCAGTGTGGCCCCTTCCTTCACGCCATGCTGGCAGTACTCCATCAGCTAGAAGGGCAGGACGTTaGGCTCGGCCCCCAAAGCCT +
Preference number: 4 (lower is better)
Translates to: RRPVWPLPSRHAGSTPSARRAGR*ARPPKP
Trigger: AGGCTTTGGGGGCCGAGCTCAACGTCCTGCCCTTCT...AGCTGATGGAGTACTGCCAGCATGGCGTGAAGGAAGGGGCCACACTGGTCTGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR TCA 90 bp GGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGCCTTTCTTATCTCCGTaGATGAGGGTCCAGTTGATG +
Preference number: 4 (lower is better)
Translates to: GGRCCAPRLKREGAPATRPFLSP*MRVQLM
Trigger: CATCAACTGGACCCTCATTCACGGAGATAAGAAAGG...CCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp CAGCCAAGGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGCCGCGGATCCAGTTGTaGATGGCCTCTGCCGGCTGG +
Preference number: 4 (lower is better)
Translates to: QPRAASDWTEGVQDADMVPRIQL*MASAGW
Trigger: CCAGCCGGCAGAGGCCATTCACAACTGGATCCGCGG...CACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp CTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGGCCGCGGATCCAGTTGTaGATGGCCTCTGCCGGCTGG +
Preference number: 4 (lower is better)
Translates to: LLLTGQRASKMQTWCAGRPRIQL*MASAGW
Trigger: CCAGCCGGCAGAGGCCATTCACAACTGGATCCGCGG...CCTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp AGGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGTCACTAACAGCTGGATaGAGTCCCCAAAGGTGGATG +
Preference number: 4 (lower is better)
Translates to: RWEVLCTQAQEGGGPSHESLTAG*SPQRWM
Trigger: CATCCACCTTTGGGGACTTCATCCAGCTGTTAGTGA...CTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp TTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGACTGGTGGGTCTGGCCTGGTTaGTGGGGATGGTGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: LFSLGGAHLTQPRAASDWWVWPG*WGWWSP
Trigger: AGGGCTCCACCATCCCCATCAACCAGGCCAGACCCA...CCAGTCAGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp TTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGACTGGACAAGGTGGGCATGGTaGTTCTGCGGCCCGTGGTCG +
Preference number: 4 (lower is better)
Translates to: LFSLGGAHLTQPRAASDWTRWAW*FCGPWS
Trigger: CGACCACGGGCCGCAGAATCACCATGCCCACCTTGT...CCAGTCAGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGGGGTCTTCCACGTCTGTaGAAACAGTTGGCTCAAAGA +
Preference number: 4 (lower is better)
Translates to: VGGAVHPGSRGRGPQPRGGLPRL*KQLAQR
Trigger: TCTTTGAGCCAACTGTTTTCACAGACGTGGAAGACC...CCCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGGTCTTGTTGTACGTGTTaGCAAACACAGTGCCTGCCT +
Preference number: 4 (lower is better)
Translates to: VGGAVHPGSRGRGPQPRGSCCTC*QTQCLP
Trigger: AGGCAGGCACTGTGTTTGTCAACACGTACAACAAGA...CCCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp TTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGACTGGGCCAAGGGCTGCTTCTaGCTGGACAGAGGGCGTCCA +
Preference number: 4 (lower is better)
Translates to: LFSLGGAHLTQPRAASDWAKGCF*LDRGRP
Trigger: TGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGC...CCAGTCAGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GCACCTTGTCGTTCCCGCGGATCCAGTTGTGAATGGCCTCTGCCGGCTGGTCCCGTGATGTTTGGGCCCTaGCTGGACTGGCTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: APCRSRGSSCEWPLPAGPVMFGP*LDWLSS
Trigger: AGAGGAGAGCCAGTCCAGTCAGGGCCCAAACATCAC...GGGACCAGCCGGCAGAGGCCATTCACAACTGGATCCGCGGGAACGACAAGGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR GCA 90 bp GGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCTGCCCTCCGGGAATTTaGAGCCGCTTGCAGAGGCGG +
Preference number: 4 (lower is better)
Translates to: GLLLTGQRASKMQTWCAGCPPGI*SRLQRR
Trigger: CCGCCTCTGCAAGCGGCTGCAAATTCCCGGAGGGCA...GCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273450.7
CDS-3UTR GCA 90 bp GTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGGGCTCTGTCCAATCACTaGAATCTTCATGGTAGCAGG +
Preference number: 4 (lower is better)
Translates to: VGGAVHPGSRGRGPQPRGALSNH*NLHGSR
Trigger: CCTGCTACCATGAAGATTGCAGTGATTGGACAGAGC...CCCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp TCACAGGCCTCTGTCCAGGCTCCCGGCACCTTGTCGTTCCCGCGGATCCAGTTGACCTCACACTCCTTCTaGAGCAGCAGGTCTCCGGTG +
Preference number: 4 (lower is better)
Translates to: SQASVQAPGTLSFPRIQLTSHSF*SSRSPV
Trigger: CACCGGAGACCTGCTGCTGCAGAAGGAGTGTGAGGT...CAACTGGATCCGCGGGAACGACAAGGTGCCGGGAGCCTGGACAGAGGCCTGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000493803.5
CDS-3UTR GCA 90 bp CAGTTTCTGTTCACAGGCCTCTGTCCAGGCTCCCGGCACCTTGTCGTTCCCGCGTTGGGGAGGATCCGCTaGCAAACACTCCGCACAGCC +
Preference number: 4 (lower is better)
Translates to: QFLFTGLCPGSRHLVVPALGRIR*QTLRTA
Trigger: GGCTGTGCGGAGTGTTTGGCAGCGGATCCTCCCCAA...CGCGGGAACGACAAGGTGCCGGGAGCCTGGACAGAGGCCTGTGAACAGAAACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR GCA 90 bp TTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGACTGGCTTGGCTGCGGCCACTaGCTTGTCGACGTCGGTGAC +
Preference number: 4 (lower is better)
Translates to: LFSLGGAHLTQPRAASDWLGCGH*LVDVGD
Trigger: GTCACCGACGTCGACAAGGCAGTGGCCGCAGCCAAG...CCAGTCAGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp AGGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGCCACACCTTTGGGAATaGCGGCCTTTAATGTCAGCT +
Preference number: 4 (lower is better)
Translates to: RWEVLCTQAQEGGGPSHEPHLWE*RPLMSA
Trigger: AGCTGACATTAAAGGCCGGCATTCCCAAAGGTGTGG...CTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp GAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTCCCCCAGGTGGGAGGTaGTGTGCACCCAGGCTCAAG +
Preference number: 4 (lower is better)
Translates to: EALFSLGGAHLTQPRAASPPGGR*CAPRLK
Trigger: CTTGAGCCTGGGTGCACAGCACCTCCCACCTGGGGG...AGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp CAGCCAAGGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGCCCCCAGGTGGGAGGTaGTGTGCACCCAGGCTCAAG +
Preference number: 4 (lower is better)
Translates to: QPRAASDWTEGVQDADMVPPGGR*CAPRLK
Trigger: CTTGAGCCTGGGTGCACAGCACCTCCCACCTGGGGG...CACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp CAGGATGGTCTGAGAGTCTCTGGCCGACCAGGGAGCCAGATCCTGGGAGGACGTACACCCACCACTTCGTaGCCCTCCTTCCTCAGGTGG +
Preference number: 4 (lower is better)
Translates to: QDGLRVSGRPGSQILGGRTPTTS*PSFLRW
Trigger: CCACCTGAGGAAGGAGGGCCACGAAGTGGTGGGTGT...ACGTCCTCCCAGGATCTGGCTCCCTGGTCGGCCAGAGACTCTCAGACCATCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp GGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCCAGGCTGAGGGAGTCTaGGGGCTTTGCCCTCAGCGA +
Preference number: 4 (lower is better)
Translates to: GLLLTGQRASKMQTWCAGQAEGV*GLCPQR
Trigger: TCGCTGAGGGCAAAGCCCCCAGACTCCCTCAGCCTG...GCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp TTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGACTGGCAGGCTGAGGGAGTCTaGGGGCTTTGCCCTCAGCGA +
Preference number: 4 (lower is better)
Translates to: LFSLGGAHLTQPRAASDWQAEGV*GLCPQR
Trigger: TCGCTGAGGGCAAAGCCCCCAGACTCCCTCAGCCTG...CCAGTCAGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp CTGGGGGCTTTGCCCTCAGCGATCAGCCTCACGGCCTGCACCATCCCTTTGATGGGATCCAGTTGTGAATaGCCTCTGCCGGCTGGTCCC +
Preference number: 4 (lower is better)
Translates to: LGALPSAISLTACTIPLMGSSCE*PLPAGP
Trigger: GGGACCAGCCGGCAGAGGCCATTCACAACTGGATCC...CATCAAAGGGATGGTGCAGGCCGTGAGGCTGATCGCTGAGGGCAAAGCCCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000493803.5
CDS-3UTR CCA 90 bp GGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCACCACCCCTGGCCGATaGGCTCCTGGGATGGGCAAA +
Preference number: 4 (lower is better)
Translates to: GLLLTGQRASKMQTWCAGTTPGR*APGMGK
Trigger: TTTGCCCATCCCAGGAGCCCATCGGCCAGGGGTGGT...GCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp TTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGACTGGCCAGGGCCTCAATGGTaGCCAGCTCCTCCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: LFSLGGAHLTQPRAASDWPGPQW*PAPPGA
Trigger: AGCACCAGGAGGAGCTGGCCACCATTGAGGCCCTGG...CCAGTCAGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000472186.5
CDS-3UTR CCA 90 bp CCCGTGGTCGGTGTCCCTGTCCAGCGGGTTGCCCACCTTCATCTTCCGCACCTCCTCAAAGAAGAACCCTaGCCGAGGGACCTGATTCCC +
Preference number: 4 (lower is better)
Translates to: PVVGVPVQRVAHLHLPHLLKEEP*PRDLIP
Trigger: GGGAATCAGGTCCCTCGGCCAGGGTTCTTCTTTGAG...GAGGTGCGGAAGATGAAGGTGGGCAACCCGCTGGACAGGGACACCGACCACGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp AGGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGAACACAGTGCCTGCCTaGAGCTTGTCACTGACATAC +
Preference number: 4 (lower is better)
Translates to: RWEVLCTQAQEGGGPSHENTVPA*SLSLTY
Trigger: GTATGTCAGTGACAAGCTCCAGGCAGGCACTGTGTT...CTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp CCCGTGGTCGGTGTCCCTGTCCAGCGGGTTGCCCACCTTCATCTTCCGCACCTCTCCAAGATGCAGACATaGTGTGCAGGCAGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: PVVGVPVQRVAHLHLPHLSKMQT*CAGRRA
Trigger: AGCCCTCCTGCCTGCACACCATGTCTGCATCTTGGA...GAGGTGCGGAAGATGAAGGTGGGCAACCCGCTGGACAGGGACACCGACCACGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp CCCGTGGTCGGTGTCCCTGTCCAGCGGGTTGCCCACCTTCATCTTCCGCACCTCAAGCTTTATTCTCCCTaGGAGGGGCACACCTCACCC +
Preference number: 4 (lower is better)
Translates to: PVVGVPVQRVAHLHLPHLKLYSP*EGHTSP
Trigger: GGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTT...GAGGTGCGGAAGATGAAGGTGGGCAACCCGCTGGACAGGGACACCGACCACGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp CGTGTTGACAAACACAGTGCCTGCCTGGAGCTTGTCACTGACATACAGGGCCTTACCGCGCGCAGGAGTTaGTGCGGGCGTCCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: RVDKHSACLELVTDIQGLTARRS*CGRPGQ
Trigger: CTGCCCGGGACGCCCGCACCAACTCCTGCGCGCGGT...AAGGCCCTGTATGTCAGTGACAAGCTCCAGGCAGGCACTGTGTTTGTCAACACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp GGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCGGATCCAGTTGTGAATaGCCGAGGCCCCTCGGTGCC +
Preference number: 4 (lower is better)
Translates to: GLLLTGQRASKMQTWCAGGSSCE*PRPLGA
Trigger: GGCACCGAGGGGCCTCGGCCATTCACAACTGGATCC...GCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452905.6
CDS-3UTR CCA 90 bp GGGAGTCTGGGGGCTTTGCCCTCAGCGATCAGCCTCACGGCCTGCACCATCCCTTTTGGAAGCATCCCTTaGCTTCCGCACCTCCTCACC +
Preference number: 4 (lower is better)
Translates to: GSLGALPSAISLTACTIPFGSIP*LPHLLT
Trigger: GGTGAGGAGGTGCGGAAGCCAAGGGATGCTTCCAAA...AGGGATGGTGCAGGCCGTGAGGCTGATCGCTGAGGGCAAAGCCCCCAGACTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR CCA 90 bp TCCCGGCACCTTGTCGTTCCCGCGGATCCAGTTGTGAATGGCCTCTGCCGGCTGAGCCTGCGCCCACTTTaGAAGCATCCCTTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: SRHLVVPADPVVNGLCRLSLRPL*KHPLAS
Trigger: GGAAGCCAAGGGATGCTTCCAAAGTGGGCGCAGGCT...CAGCCGGCAGAGGCCATTCACAACTGGATCCGCGGGAACGACAAGGTGCCGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR CCA 90 bp TCCCGGCACCTTGTCGTTCCCGCGGATCCAGTTGTGAATGGCCTCTGCCGGCTGTCAGGACCAGCCGGGTaGTCAGGGACAAATCAGGGT +
Preference number: 4 (lower is better)
Translates to: SRHLVVPADPVVNGLCRLSGPAG*SGTNQG
Trigger: ACCCTGATTTGTCCCTGACCACCCGGCTGGTCCTGA...CAGCCGGCAGAGGCCATTCACAACTGGATCCGCGGGAACGACAAGGTGCCGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493803.5
CDS-3UTR TCA 90 bp TTCTGTTCACAGGCCTCTGTCCAGGCTCCCGGCACCTTGTCGTTCCCGCGGATCGCCACCGGGAGTACTTaGATACCGGCACTCCATCCT +
Preference number: 4 (lower is better)
Translates to: FCSQASVQAPGTLSFPRIATGST*IPALHP
Trigger: AGGATGGAGTGCCGGTATTCAAGTACTCCCGGTGGC...GATCCGCGGGAACGACAAGGTGCCGGGAGCCTGGACAGAGGCCTGTGAACAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR TCA 90 bp GCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGAGAAGGGCAGGACGTTaGGCTCGGCCCCCAAAGCCT +
Preference number: 4 (lower is better)
Translates to: AASDWTEGVQDADMVCRQRRAGR*ARPPKP
Trigger: AGGCTTTGGGGGCCGAGCTCAACGTCCTGCCCTTCT...CTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp TTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCAGAAGGGCAGGACGTTaGGCTCGGCCCCCAAAGCCT +
Preference number: 4 (lower is better)
Translates to: FRSFILPGRGTPHPAKGCRRAGR*ARPPKP
Trigger: AGGCTTTGGGGGCCGAGCTCAACGTCCTGCCCTTCT...GCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GCCAGGAAGGGTAGGGAGCCCAGCTTTCCCAGAACAGAGAAGTGGGTAAACTGCCCGCGGATCCAGTTGTaGATGGCCTCTGCCGGCTGG +
Preference number: 4 (lower is better)
Translates to: ARKGREPSFPRTEKWVNCPRIQL*MASAGW
Trigger: CCAGCCGGCAGAGGCCATTCACAACTGGATCCGCGG...GCAGTTTACCCACTTCTCTGTTCTGGGAAAGCTGGGCTCCCTACCCTTCCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493803.5
CDS-3UTR TCA 90 bp GCCCTTGCTGTCTTCTGCGTGCAGGAGCTAAGTCCCCTCCAGCCCAGGCTGGTGCACAGACGCGGCCCCTaGCTTGAAGAAATCAGTGGA +
Preference number: 4 (lower is better)
Translates to: ALAVFCVQELSPLQPRLVHRRGP*LEEISG
Trigger: TCCACTGATTTCTTCAAGTCAGGGGCCGCGTCTGTG...CACCAGCCTGGGCTGGAGGGGACTTAGCTCCTGCACGCAGAAGACAGCAAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR TCA 90 bp TCCGTGGCATTGGCCCGAGACAGCACGGCATCCAAGTCCCCATCAGCAAACCGACCTTGTCGACGTCGGTaGCTTGGGCCAGGGATACCT +
Preference number: 4 (lower is better)
Translates to: SVALARDSTASKSPSANRPCRRR*LGPGIP
Trigger: AGGTATCCCTGGCCCAAGTCACCGACGTCGACAAGG...TCGGTTTGCTGATGGGGACTTGGATGCCGTGCTGTCTCGGGCCAATGCCACGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR TCA 90 bp GGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCCCTTGTCGACGTCGGTaGCTTGGGCCAGGGATACCT +
Preference number: 4 (lower is better)
Translates to: GLLLTGQRASKMQTWCAGPCRRR*LGPGIP
Trigger: AGGTATCCCTGGCCCAAGTCACCGACGTCGACAAGG...GCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp CAGCCAAGGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGGGTCTGGCCTGGTTaGTGGGGATGGTGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: QPRAASDWTEGVQDADMVWVWPG*WGWWSP
Trigger: AGGGCTCCACCATCCCCATCAACCAGGCCAGACCCA...CACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGTGGGTCTGGCCTGGTTaGTGGGGATGGTGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: AASDWTEGVQDADMVCRQWVWPG*WGWWSP
Trigger: AGGGCTCCACCATCCCCATCAACCAGGCCAGACCCA...CTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTTGGGTCTGGCCTGGTTaGTGGGGATGGTGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: EALFSLGGAHLTQPRAASWVWPG*WGWWSP
Trigger: AGGGCTCCACCATCCCCATCAACCAGGCCAGACCCA...AGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGACAAGGTGGGCATGGTaGTTCTGCGGCCCGTGGTCG +
Preference number: 4 (lower is better)
Translates to: AASDWTEGVQDADMVCRQTRWAW*FCGPWS
Trigger: CGACCACGGGCCGCAGAATCACCATGCCCACCTTGT...CTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp TTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCACAAGGTGGGCATGGTaGTTCTGCGGCCCGTGGTCG +
Preference number: 4 (lower is better)
Translates to: FRSFILPGRGTPHPAKGCTRWAW*FCGPWS
Trigger: CGACCACGGGCCGCAGAATCACCATGCCCACCTTGT...GCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp CAGCCAAGGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGACAAGGTGGGCATGGTaGTTCTGCGGCCCGTGGTCG +
Preference number: 4 (lower is better)
Translates to: QPRAASDWTEGVQDADMVTRWAW*FCGPWS
Trigger: CGACCACGGGCCGCAGAATCACCATGCCCACCTTGT...CACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp CCGAGGGACCTGATTCCCGCCGCAGACCAGTGTGGCCCCTTCCTTCACGCCATGCAAATCCAGACTGTTTaGATCCTCCGAAGGGAGCGG +
Preference number: 4 (lower is better)
Translates to: PRDLIPAADQCGPFLHAMQIQTV*ILRRER
Trigger: CCGCTCCCTTCGGAGGATTCAAACAGTCTGGATTTG...CATGGCGTGAAGGAAGGGGCCACACTGGTCTGCGGCGGGAATCAGGTCCCTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR TCA 90 bp CTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGGGCCAAGGGCTGCTTCTaGCTGGACAGAGGGCGTCCA +
Preference number: 4 (lower is better)
Translates to: LLLTGQRASKMQTWCAGRAKGCF*LDRGRP
Trigger: TGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGC...CCTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp TTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCGCCAAGGGCTGCTTCTaGCTGGACAGAGGGCGTCCA +
Preference number: 4 (lower is better)
Translates to: FRSFILPGRGTPHPAKGCAKGCF*LDRGRP
Trigger: TGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGC...GCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GTTTCTGTTCACAGGCCTCTGTCCAGGCTCCCGGCACCTTGTCGTTCCCGCGGACCTAGGGTCTTCCTGTaGGGCCTGAGTCCAAGGACA +
Preference number: 4 (lower is better)
Translates to: VSVHRPLSRLPAPCRSRGPRVFL*GLSPRT
Trigger: TGTCCTTGGACTCAGGCCTCACAGGAAGACCCTAGG...TCCGCGGGAACGACAAGGTGCCGGGAGCCTGGACAGAGGCCTGTGAACAGAAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493803.5
CDS-3UTR GCA 90 bp GTCTTCCACGTCTGTGAAAACAGTTGGCTCAAAGAAGAACCCTGGCCGAGGGACGCCGAGGCCCCTCGGTaGCTAGGGAGCAGTGACGGG +
Preference number: 4 (lower is better)
Translates to: VFHVCENSWLKEEPWPRDAEAPR*LGSSDG
Trigger: CCCGTCACTGCTCCCTAGGCACCGAGGGGCCTCGGC...GTCCCTCGGCCAGGGTTCTTCTTTGAGCCAACTGTTTTCACAGACGTGGAAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR GCA 90 bp TTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGACTGGAGCGGTTGTACAGCGTaGTCACGGTGTCGTCCGGGA +
Preference number: 4 (lower is better)
Translates to: LFSLGGAHLTQPRAASDWSGCTA*SRCRPG
Trigger: TCCCGGACGACACCGTGAGCACGCTGTACAACCGCT...CCAGTCAGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp TTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGACTGGGGAGTCTGGGGGCTTTaGCCTCAGCGATCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: LFSLGGAHLTQPRAASDWGVWGL*PQRSAS
Trigger: TGAGGCTGATCGCTGAGGGCAAAGCCCCCAGACTCC...CCAGTCAGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp TCACAGGCCTCTGTCCAGGCTCCCGGCACCTTGTCGTTCCCGCGGATCCAGTTGGTTGTGAATGGCCTCTaGCGGCTGGTCCCAGTTGAT +
Preference number: 4 (lower is better)
Translates to: SQASVQAPGTLSFPRIQLVVNGL*RLVPVD
Trigger: ATCAACTGGGACCAGCCGGCAGAGGCCATTCACAAC...CAACTGGATCCGCGGGAACGACAAGGTGCCGGGAGCCTGGACAGAGGCCTGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000493803.5
CDS-3UTR GCA 90 bp AGGGAGTCTGGGGGCTTTGCCCTCAGCGATCAGCCTCACGGCCTGCACCATCCCAAAGAGGATGAGTCCTaGTTTGGTGACCACCCCTGG +
Preference number: 4 (lower is better)
Translates to: RESGGFALSDQPHGLHHPKEDES*FGDHPW
Trigger: CCAGGGGTGGTCACCAAAGCAGGACTCATCCTCTTT...GGGATGGTGCAGGCCGTGAGGCTGATCGCTGAGGGCAAAGCCCCCAGACTCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000493803.5
CDS-3UTR GCA 90 bp GGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGAGGCCAGGATCATTTTaGCATCCTCCAGCTGAATAT +
Preference number: 4 (lower is better)
Translates to: GGRCCAPRLKREGAPATRRPGSF*HPPAEY
Trigger: ATATTCAGCTGGAGGATGGCAAAATGATCCTGGCCT...CCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp CAGCCAAGGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGCTTGGCTGCGGCCACTaGCTTGTCGACGTCGGTGAC +
Preference number: 4 (lower is better)
Translates to: QPRAASDWTEGVQDADMVLGCGH*LVDVGD
Trigger: GTCACCGACGTCGACAAGGCAGTGGCCGCAGCCAAG...CACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp TCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTCTTGGCTGCGGCCACTaGCTTGTCGACGTCGGTGAC +
Preference number: 4 (lower is better)
Translates to: SEALFSLGGAHLTQPRAALGCGH*LVDVGD
Trigger: GTCACCGACGTCGACAAGGCAGTGGCCGCAGCCAAG...AGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp TTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGACTGGGCCAGCTCCTCCTGGTaGTGCTCCATGAGATCTGCC +
Preference number: 4 (lower is better)
Translates to: LFSLGGAHLTQPRAASDWASSSW*CSMRSA
Trigger: GGCAGATCTCATGGAGCAGCACCAGGAGGAGCTGGC...CCAGTCAGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000472186.5
CDS-3UTR GCA 90 bp GGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCGCCAGCTCCTCCTGGTaGTGCTCCATGAGATCTGCC +
Preference number: 4 (lower is better)
Translates to: GLLLTGQRASKMQTWCAGASSSW*CSMRSA
Trigger: GGCAGATCTCATGGAGCAGCACCAGGAGGAGCTGGC...GCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000472186.5
CDS-3UTR GCA 90 bp GGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGAAAGAGTCGGCCTGCTaGAATGCAATTCTCTCCTTT +
Preference number: 4 (lower is better)
Translates to: GGRCCAPRLKREGAPATRKESAC*NAILSF
Trigger: AAAGGAGAGAATTGCATTGCAGCAGGCCGACTCTTT...CCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp TTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGACTGGCCCTGTCCAGCGGGTTaGCCACCTTCATCTTCCGCA +
Preference number: 4 (lower is better)
Translates to: LFSLGGAHLTQPRAASDWPCPAG*PPSSSA
Trigger: TGCGGAAGATGAAGGTGGGCAACCCGCTGGACAGGG...CCAGTCAGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp GGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCCCCTGTCCAGCGGGTTaGCCACCTTCATCTTCCGCA +
Preference number: 4 (lower is better)
Translates to: GLLLTGQRASKMQTWCAGPCPAG*PPSSSA
Trigger: TGCGGAAGATGAAGGTGGGCAACCCGCTGGACAGGG...GCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp GGCAGTACTCCATCAGCTTCACAAGGTGGGCATGGTGATTCTGCGGCCCGTGGTAACCCCGCAGGGGCCTaGGCTCTTTCCCGCTTAGGT +
Preference number: 4 (lower is better)
Translates to: GSTPSASQGGHGDSAARGNPAGA*ALSRLG
Trigger: ACCTAAGCGGGAAAGAGCGCAGGCCCCTGCGGGGTT...ACCACGGGCCGCAGAATCACCATGCCCACCTTGTGAAGCTGATGGAGTACTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455064.6
CDS-3UTR GCA 90 bp TCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTCCACGTTGTGGGGTCTaGTATCCGGCCTCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: SEALFSLGGAHLTQPRAAPRCGV*YPASLC
Trigger: GCAGAGGGAGGCCGGATAGCAGACCCCACAACGTGG...AGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472186.5
CDS-3UTR CCA 90 bp TTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGACTGGACACCCACCACTTCGTaGCCCTCCTTCCTCAGGTGG +
Preference number: 4 (lower is better)
Translates to: LFSLGGAHLTQPRAASDWTPTTS*PSFLRW
Trigger: CCACCTGAGGAAGGAGGGCCACGAAGTGGTGGGTGT...CCAGTCAGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp CTGGCAGTACTCCATCAGCTTCACAAGGTGGGCATGGTGATTCTGCGGCCCGTGCAGGCTGAGGGAGTCTaGGGGCTTTGCCCTCAGCGA +
Preference number: 4 (lower is better)
Translates to: LAVLHQLHKVGMVILRPVQAEGV*GLCPQR
Trigger: TCGCTGAGGGCAAAGCCCCCAGACTCCCTCAGCCTG...CACGGGCCGCAGAATCACCATGCCCACCTTGTGAAGCTGATGGAGTACTGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp AGTCTCTGGCCGACCAGGGAGCCAGATCCTGGGAGGACGTTAACCACACCTTTGCAGGCTGAGGGAGTCTaGGGGCTTTGCCCTCAGCGA +
Preference number: 4 (lower is better)
Translates to: SLWPTREPDPGRTLTTPLQAEGV*GLCPQR
Trigger: TCGCTGAGGGCAAAGCCCCCAGACTCCCTCAGCCTG...CAAAGGTGTGGTTAACGTCCTCCCAGGATCTGGCTCCCTGGTCGGCCAGAGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp CATCCTTCTCAGCTTCCAGACAGTGGCAGCTGCTTCCTGCAGTCGCTGTCCCCACAGGCTGAGGGAGTCTaGGGGCTTTGCCCTCAGCGA +
Preference number: 4 (lower is better)
Translates to: HPSQLPDSGSCFLQSLSPQAEGV*GLCPQR
Trigger: TCGCTGAGGGCAAAGCCCCCAGACTCCCTCAGCCTG...TGGGGACAGCGACTGCAGGAAGCAGCTGCCACTGTCTGGAAGCTGAGAAGGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR CCA 90 bp TCACAGGCCTCTGTCCAGGCTCCCGGCACCTTGTCGTTCCCGCGGATCCAGTTGGAATCCCCTCATAGGTaGCTCCTTCCTCAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: SQASVQAPGTLSFPRIQLESPHR*LLPQAE
Trigger: CTCAGCCTGAGGAAGGAGCCACCTATGAGGGGATTC...CAACTGGATCCGCGGGAACGACAAGGTGCCGGGAGCCTGGACAGAGGCCTGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000493803.5
CDS-3UTR CCA 90 bp TCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTGGCCGATGGGCTCCTaGGATGGGCAAAGCGTCTCC +
Preference number: 4 (lower is better)
Translates to: SEALFSLGGAHLTQPRAAWPMGS*DGQSVS
Trigger: GGAGACGCTTTGCCCATCCCAGGAGCCCATCGGCCA...AGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGACCACCCCTGGCCGATaGGCTCCTGGGATGGGCAAA +
Preference number: 4 (lower is better)
Translates to: AASDWTEGVQDADMVCRQTTPGR*APGMGK
Trigger: TTTGCCCATCCCAGGAGCCCATCGGCCAGGGGTGGT...CTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp CCAAATTCCGTGGCATTGGCCCGAGACAGCACGGCATCCAAGTCCCCATCAGCAACCACCCCTGGCCGATaGGCTCCTGGGATGGGCAAA +
Preference number: 4 (lower is better)
Translates to: PNSVALARDSTASKSPSATTPGR*APGMGK
Trigger: TTTGCCCATCCCAGGAGCCCATCGGCCAGGGGTGGT...TGCTGATGGGGACTTGGATGCCGTGCTGTCTCGGGCCAATGCCACGGAATTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp CAGCCAAGGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGACCACCCCTGGCCGATaGGCTCCTGGGATGGGCAAA +
Preference number: 4 (lower is better)
Translates to: QPRAASDWTEGVQDADMVTTPGR*APGMGK
Trigger: TTTGCCCATCCCAGGAGCCCATCGGCCAGGGGTGGT...CACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCTTTGGTGACCACCCCTaGCCGATGGGCTCCTGGGAT +
Preference number: 4 (lower is better)
Translates to: GLLLTGQRASKMQTWCAGFGDHP*PMGSWD
Trigger: ATCCCAGGAGCCCATCGGCCAGGGGTGGTCACCAAA...GCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp TTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGACTGGCCAATGAAGAGCTGGTaGGGCATGCGGACAGTGCGC +
Preference number: 4 (lower is better)
Translates to: LFSLGGAHLTQPRAASDWPMKSW*GMRTVR
Trigger: GCGCACTGTCCGCATGCCCCACCAGCTCTTCATTGG...CCAGTCAGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GCCAAATTCCGTGGCATTGGCCCGAGACAGCACGGCATCCAAGTCCCCATCAGCCCCCCAATGAAGAGCTaGTGGGGCATGCGGACAGTG +
Preference number: 4 (lower is better)
Translates to: AKFRGIGPRQHGIQVPISPPMKS*WGMRTV
Trigger: CACTGTCCGCATGCCCCACCAGCTCTTCATTGGGGG...GCTGATGGGGACTTGGATGCCGTGCTGTCTCGGGCCAATGCCACGGAATTTGGC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp TTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGACTGGCCCCCAATGAAGAGCTaGTGGGGCATGCGGACAGTG +
Preference number: 4 (lower is better)
Translates to: LFSLGGAHLTQPRAASDWPPMKS*WGMRTV
Trigger: CACTGTCCGCATGCCCCACCAGCTCTTCATTGGGGG...CCAGTCAGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCTCGACGTCGGTGACTTaGGCCAGGGATACCTGGCAG +
Preference number: 4 (lower is better)
Translates to: GLLLTGQRASKMQTWCAGSTSVT*ARDTWQ
Trigger: CTGCCAGGTATCCCTGGCCCAAGTCACCGACGTCGA...GCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp CTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGGCCAGGGCCTCAATGGTaGCCAGCTCCTCCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: LLLTGQRASKMQTWCAGRPGPQW*PAPPGA
Trigger: AGCACCAGGAGGAGCTGGCCACCATTGAGGCCCTGG...CCTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000472186.5
CDS-3UTR CCA 90 bp TTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCCCAGGGCCTCAATGGTaGCCAGCTCCTCCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: FRSFILPGRGTPHPAKGCPGPQW*PAPPGA
Trigger: AGCACCAGGAGGAGCTGGCCACCATTGAGGCCCTGG...GCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCCGGTTGGGTCTGGCCTaGTTGATGGGGATGGTGGAG +
Preference number: 4 (lower is better)
Translates to: GLLLTGQRASKMQTWCAGRLGLA*LMGMVE
Trigger: CTCCACCATCCCCATCAACCAGGCCAGACCCAACCG...GCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp CCATCAGCTTCACAAGGTGGGCATGGTGATTCTGCGGCCCGTGGTCGGTGTCCCCAGGGAGCCAGATCCTaGGAGGACGTTAACCACACC +
Preference number: 4 (lower is better)
Translates to: PSASQGGHGDSAARGRCPQGARS*EDVNHT
Trigger: GGTGTGGTTAACGTCCTCCCAGGATCTGGCTCCCTG...GGGACACCGACCACGGGCCGCAGAATCACCATGCCCACCTTGTGAAGCTGATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp CTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGGCGCCGCAGACCAGTGTaGCCCCTTCCTTCACGCCAT +
Preference number: 4 (lower is better)
Translates to: LLLTGQRASKMQTWCAGRRRRPV*PLPSRH
Trigger: ATGGCGTGAAGGAAGGGGCCACACTGGTCTGCGGCG...CCTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp TCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTCGCCGCAGACCAGTGTaGCCCCTTCCTTCACGCCAT +
Preference number: 4 (lower is better)
Translates to: SEALFSLGGAHLTQPRAARRRPV*PLPSRH
Trigger: ATGGCGTGAAGGAAGGGGCCACACTGGTCTGCGGCG...AGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GGCAGTACTCCATCAGCTTCACAAGGTGGGCATGGTGATTCTGCGGCCCGTGGTCCAGTCCGCGAGCTCTaGTTAAGGCCAGAGCCCGTG +
Preference number: 4 (lower is better)
Translates to: GSTPSASQGGHGDSAARGPVREL*LRPEPV
Trigger: CACGGGCTCTGGCCTTAACCAGAGCTCGCGGACTGG...ACCACGGGCCGCAGAATCACCATGCCCACCTTGTGAAGCTGATGGAGTACTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455064.6
3UTR CAA 72 bp CCATTCTCAAAGGCATCCTTGGCTGCGGCCACTGCCTaGTCGACGTCGGTGACTTGGGCCAGGGATACCTGG +
Preference number: 4 (lower is better)
Translates to: PFSKASLAAATA*STSVTWARDTW
Trigger: CCAGGTATCCCTGGCCCAAGTCACCGACGTCGACAAGGCAGTGGCCGCAGCCAAGGATGCCTTTGAGAATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR TCA 90 bp GGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCGCCACCGGGAGTACTTaGATACCGGCACTCCATCCT +
Preference number: 4 (lower is better)
Translates to: GLLLTGQRASKMQTWCAGATGST*IPALHP
Trigger: AGGATGGAGTGCCGGTATTCAAGTACTCCCGGTGGC...GCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp TTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGACTGGGCCACCGGGAGTACTTaGATACCGGCACTCCATCCT +
Preference number: 4 (lower is better)
Translates to: LFSLGGAHLTQPRAASDWATGST*IPALHP
Trigger: AGGATGGAGTGCCGGTATTCAAGTACTCCCGGTGGC...CCAGTCAGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GCCACTGCCCAGAAGCTGATGGTGGCAGTGGCTGGCAGGTACATGTTGGGCTCCGTGCCTAGGGAGCAGTaGCGGGTGATAGATGATGGA +
Preference number: 4 (lower is better)
Translates to: ATAQKLMVAVAGRYMLGSVPREQ*RVIDDG
Trigger: TCCATCATCTATCACCCGTCACTGCTCCCTAGGCAC...GGAGCCCAACATGTACCTGCCAGCCACTGCCACCATCAGCTTCTGGGCAGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR TCA 90 bp CCGAGGGACCTGATTCCCGCCGCAGACCAGTGTGGCCCCTTCCTTCACGCCATGTTGCCATCCTCCAGCTaGATATTCTTCACCAGCAGC +
Preference number: 4 (lower is better)
Translates to: PRDLIPAADQCGPFLHAMLPSSS*IFFTSS
Trigger: GCTGCTGGTGAAGAATATTCAGCTGGAGGATGGCAA...CATGGCGTGAAGGAAGGGGCCACACTGGTCTGCGGCGGGAATCAGGTCCCTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR TCA 90 bp GAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTCCTTGTCGACGTCGGTaGCTTGGGCCAGGGATACCT +
Preference number: 4 (lower is better)
Translates to: EALFSLGGAHLTQPRAASPCRRR*LGPGIP
Trigger: AGGTATCCCTGGCCCAAGTCACCGACGTCGACAAGG...AGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGCCTTGTCGACGTCGGTaGCTTGGGCCAGGGATACCT +
Preference number: 4 (lower is better)
Translates to: AASDWTEGVQDADMVCRQPCRRR*LGPGIP
Trigger: AGGTATCCCTGGCCCAAGTCACCGACGTCGACAAGG...CTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp CTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGGCCTTGTCGACGTCGGTaGCTTGGGCCAGGGATACCT +
Preference number: 4 (lower is better)
Translates to: LLLTGQRASKMQTWCAGRPCRRR*LGPGIP
Trigger: AGGTATCCCTGGCCCAAGTCACCGACGTCGACAAGG...CCTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp TCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTTGGGTCTGGCCTGGTTaGTGGGGATGGTGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: SSEALFSLGGAHLTQPRAWVWPG*WGWWSP
Trigger: AGGGCTCCACCATCCCCATCAACCAGGCCAGACCCA...AGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp TTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGACTGGGTGAGTGGGGTCACCTaGGCAGGCTTGATCACCACT +
Preference number: 4 (lower is better)
Translates to: LFSLGGAHLTQPRAASDWVSGVT*AGLITT
Trigger: AGTGGTGATCAAGCCTGCTCAGGTGACCCCACTCAC...CCAGTCAGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCGTGAGTGGGGTCACCTaGGCAGGCTTGATCACCACT +
Preference number: 4 (lower is better)
Translates to: GLLLTGQRASKMQTWCAGVSGVT*AGLITT
Trigger: AGTGGTGATCAAGCCTGCTCAGGTGACCCCACTCAC...GCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp TTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGACTGGCACATCAGGATGGTCTaGGAGTCTCTGGCCGACCAG +
Preference number: 4 (lower is better)
Translates to: LFSLGGAHLTQPRAASDWHIRMV*ESLADQ
Trigger: CTGGTCGGCCAGAGACTCTCAGACCATCCTGATGTG...CCAGTCAGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp CTCTCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCCAAGGGCTGCTTCTaGCTGGACAGAGGGCGTCCA +
Preference number: 4 (lower is better)
Translates to: LSSEALFSLGGAHLTQPRAKGCF*LDRGRP
Trigger: TGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGC...CCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GTGGACGGTCTCTCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCGCCAAGGGCTGCTTCTaGCTGGACAGAGGGCGTCCA +
Preference number: 4 (lower is better)
Translates to: VDGLSSEALFSLGGAHLTAKGCF*LDRGRP
Trigger: TGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGC...GGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGAGAGACCGTCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455064.6
CDS-3UTR TCA 90 bp ATCCTTGGCTGCGGCCACTGCCTTGTCGACGTCGGTGACTTGGGCCAGGGATACTTAGAGCCTCTGGTGTaGTGTTTGGGCCCTGACTGG +
Preference number: 4 (lower is better)
Translates to: ILGCGHCLVDVGDLGQGYLEPLV*CLGPDW
Trigger: CCAGTCAGGGCCCAAACATCACACCAGAGGCTCTAA...GTATCCCTGGCCCAAGTCACCGACGTCGACAAGGCAGTGGCCGCAGCCAAGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR GCA 90 bp GGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCGAATTTGCAGCCGCTTaGAGAGGCGGCCCCTTAGCA +
Preference number: 4 (lower is better)
Translates to: GLLLTGQRASKMQTWCAGEFAAA*RGGPLA
Trigger: TGCTAAGGGGCCGCCTCTGCAAGCGGCTGCAAATTC...GCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273450.7
CDS-3UTR GCA 90 bp CTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGGAGCGGTTGTACAGCGTaGTCACGGTGTCGTCCGGGA +
Preference number: 4 (lower is better)
Translates to: LLLTGQRASKMQTWCAGRSGCTA*SRCRPG
Trigger: TCCCGGACGACACCGTGAGCACGCTGTACAACCGCT...CCTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp GAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGGAGTCTGGGGGCTTTaGCCTCAGCGATCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: EALFSLGGAHLTQPRAASGVWGL*PQRSAS
Trigger: TGAGGCTGATCGCTGAGGGCAAAGCCCCCAGACTCC...AGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp GCATTGGCCCGAGACAGCACGGCATCCAAGTCCCCATCAGCAAACCGAGAGATGGGAGTCTGGGGGCTTTaGCCTCAGCGATCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: ALARDSTASKSPSANREMGVWGL*PQRSAS
Trigger: TGAGGCTGATCGCTGAGGGCAAAGCCCCCAGACTCC...CATCTCTCGGTTTGCTGATGGGGACTTGGATGCCGTGCTGTCTCGGGCCAATGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR GCA 90 bp TCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTGGAGTCTGGGGGCTTTaGCCTCAGCGATCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: SEALFSLGGAHLTQPRAAGVWGL*PQRSAS
Trigger: TGAGGCTGATCGCTGAGGGCAAAGCCCCCAGACTCC...AGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp AGGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGAGGCCAGGATCATTTTaGCATCCTCCAGCTGAATAT +
Preference number: 4 (lower is better)
Translates to: RWEVLCTQAQEGGGPSHERPGSF*HPPAEY
Trigger: ATATTCAGCTGGAGGATGGCAAAATGATCCTGGCCT...CTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp CCGAGGGACCTGATTCCCGCCGCAGACCAGTGTGGCCCCTTCCTTCACGCCATGAAGGACACTGCTGGCTaGCCCCTTAAAGAAGTTCGA +
Preference number: 4 (lower is better)
Translates to: PRDLIPAADQCGPFLHAMKDTAG*PLKEVR
Trigger: TCGAACTTCTTTAAGGGGGCAGCCAGCAGTGTCCTT...CATGGCGTGAAGGAAGGGGCCACACTGGTCTGCGGCGGGAATCAGGTCCCTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR GCA 90 bp GCCACTGCCCAGAAGCTGATGGTGGCAGTGGCTGGCAGGTACATGTTGGGCTCCCGCAGTAACCAGCTCTaGCTCTGTCAGCTCAAGGAC +
Preference number: 4 (lower is better)
Translates to: ATAQKLMVAVAGRYMLGSRSNQL*LCQLKD
Trigger: GTCCTTGAGCTGACAGAGGCAGAGCTGGTTACTGCG...GGAGCCCAACATGTACCTGCCAGCCACTGCCACCATCAGCTTCTGGGCAGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR GCA 90 bp TCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTTGGGGAGGATCCGCTaGCAAACACTCCGCACAGCC +
Preference number: 4 (lower is better)
Translates to: SEALFSLGGAHLTQPRAALGRIR*QTLRTA
Trigger: GGCTGTGCGGAGTGTTTGGCAGCGGATCCTCCCCAA...AGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp TCCCTGGTGAAGACACCAGAAGCCAGGCCAAATTCCGTGGCATTGGCCCGAGACTTGGGGAGGATCCGCTaGCAAACACTCCGCACAGCC +
Preference number: 4 (lower is better)
Translates to: SLVKTPEARPNSVALARDLGRIR*QTLRTA
Trigger: GGCTGTGCGGAGTGTTTGGCAGCGGATCCTCCCCAA...GTCTCGGGCCAATGCCACGGAATTTGGCCTGGCTTCTGGTGTCTTCACCAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR GCA 90 bp TCATTCCCAAAGAGGATGAGTCCTGCTTTGGTGACCACCCCTGGCCGATGGGCTCTTGGCTGCGGCCACTaGCTTGTCGACGTCGGTGAC +
Preference number: 4 (lower is better)
Translates to: SFPKRMSPALVTTPGRWALGCGH*LVDVGD
Trigger: GTCACCGACGTCGACAAGGCAGTGGCCGCAGCCAAG...AGCCCATCGGCCAGGGGTGGTCACCAAAGCAGGACTCATCCTCTTTGGGAATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR GCA 90 bp TTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGACTGGAAAGGCATCCTTGGCTaGGGCCACTGCCTTGTCGAC +
Preference number: 4 (lower is better)
Translates to: LFSLGGAHLTQPRAASDWKGILG*GHCLVD
Trigger: GTCGACAAGGCAGTGGCCGCAGCCAAGGATGCCTTT...CCAGTCAGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp CAGCCAAGGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGGCCAGCTCCTCCTGGTaGTGCTCCATGAGATCTGCC +
Preference number: 4 (lower is better)
Translates to: QPRAASDWTEGVQDADMVASSSW*CSMRSA
Trigger: GGCAGATCTCATGGAGCAGCACCAGGAGGAGCTGGC...CACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000472186.5
CDS-3UTR GCA 90 bp GGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGGTCTGGATGGACATaGCCACGTGGGTCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: GLLLTGQRASKMQTWCAGRSGWT*PRGSSG
Trigger: CCCTGAAGACCCACGTGGGCATGTCCATCCAGACCT...GCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000472186.5
CDS-3UTR GCA 90 bp CAGCCAAGGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGCCCTGTCCAGCGGGTTaGCCACCTTCATCTTCCGCA +
Preference number: 4 (lower is better)
Translates to: QPRAASDWTEGVQDADMVPCPAG*PPSSSA
Trigger: TGCGGAAGATGAAGGTGGGCAACCCGCTGGACAGGG...CACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp TCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTCCCTGTCCAGCGGGTTaGCCACCTTCATCTTCCGCA +
Preference number: 4 (lower is better)
Translates to: SEALFSLGGAHLTQPRAAPCPAG*PPSSSA
Trigger: TGCGGAAGATGAAGGTGGGCAACCCGCTGGACAGGG...AGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp CATCTTCCGCACCTCTTCTACCACTCTCCGCACGAACTCATCATGAATGGAGTCGCGCGCAGGAGTTGGTaGGGGCGTCCCGGGCAGGTT +
Preference number: 4 (lower is better)
Translates to: HLPHLFYHSPHELIMNGVARRSW*GRPGQV
Trigger: AACCTGCCCGGGACGCCCGCACCAACTCCTGCGCGC...GACTCCATTCATGATGAGTTCGTGCGGAGAGTGGTAGAAGAGGTGCGGAAGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR GCA 90 bp ACACTCCGCACAGCCTCCGCAGTAACCAGCTCTGCCTCTGTCAGCTCAAGGACACCAGACAGTGGCAGCTaGTTCCTGCAGTCGCTGTCC +
Preference number: 4 (lower is better)
Translates to: TLRTASAVTSSASVSSRTPDSGS*FLQSLS
Trigger: GGACAGCGACTGCAGGAAGCAGCTGCCACTGTCTGG...TGTCCTTGAGCTGACAGAGGCAGAGCTGGTTACTGCGGAGGCTGTGCGGAGTGT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR GCA 90 bp CTCTCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGTATCCGGCCTCCCTCTaGACGCGCGACCGTCCACTT +
Preference number: 4 (lower is better)
Translates to: LSSEALFSLGGAHLTQPRYPASL*TRDRPL
Trigger: AAGTGGACGGTCGCGCGTGCAGAGGGAGGCCGGATA...CCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472186.5
CDS-3UTR GCA 90 bp CTGGGGGCTTTGCCCTCAGCGATCAGCCTCACGGCCTGCACCATCCCTTTGATGGAGAAGTGGGTAAACTaGCTCGGACACCCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: LGALPSAISLTACTIPLMEKWVN*LGHPVL
Trigger: GAGCACAGGGTGTCCGAGGCAGTTTACCCACTTCTC...CATCAAAGGGATGGTGCAGGCCGTGAGGCTGATCGCTGAGGGCAAAGCCCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493803.5
CDS-3UTR CCA 90 bp CTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGGACACCCACCACTTCGTaGCCCTCCTTCCTCAGGTGG +
Preference number: 4 (lower is better)
Translates to: LLLTGQRASKMQTWCAGRTPTTS*PSFLRW
Trigger: CCACCTGAGGAAGGAGGGCCACGAAGTGGTGGGTGT...CCTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp TCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTACACCCACCACTTCGTaGCCCTCCTTCCTCAGGTGG +
Preference number: 4 (lower is better)
Translates to: SEALFSLGGAHLTQPRAATPTTS*PSFLRW
Trigger: CCACCTGAGGAAGGAGGGCCACGAAGTGGTGGGTGT...AGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCATGGCCTCTGCCGGCTaGTCCCAGTTGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: GLLLTGQRASKMQTWCAGMASAG*SQLILA
Trigger: AGCCAAGATCAACTGGGACCAGCCGGCAGAGGCCAT...GCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp CAGCCAAGGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGGGATCCAGTTGTGAATaGCCTCTGCCGGCTGGTCCC +
Preference number: 4 (lower is better)
Translates to: QPRAASDWTEGVQDADMVGSSCE*PLPAGP
Trigger: GGGACCAGCCGGCAGAGGCCATTCACAACTGGATCC...CACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp CTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGGGGATCCAGTTGTGAATaGCCTCTGCCGGCTGGTCCC +
Preference number: 4 (lower is better)
Translates to: LLLTGQRASKMQTWCAGRGSSCE*PLPAGP
Trigger: GGGACCAGCCGGCAGAGGCCATTCACAACTGGATCC...CCTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp TTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTTGGTGACCACCCCTaGCCGATGGGCTCCTGGGAT +
Preference number: 4 (lower is better)
Translates to: FRSFILPGRGTPHPAKGCFGDHP*PMGSWD
Trigger: ATCCCAGGAGCCCATCGGCCAGGGGTGGTCACCAAA...GCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp TCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTTTGGTGACCACCCCTaGCCGATGGGCTCCTGGGAT +
Preference number: 4 (lower is better)
Translates to: SEALFSLGGAHLTQPRAAFGDHP*PMGSWD
Trigger: ATCCCAGGAGCCCATCGGCCAGGGGTGGTCACCAAA...AGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp CAGCCAAGGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTTTGGTGACCACCCCTaGCCGATGGGCTCCTGGGAT +
Preference number: 4 (lower is better)
Translates to: QPRAASDWTEGVQDADMVFGDHP*PMGSWD
Trigger: ATCCCAGGAGCCCATCGGCCAGGGGTGGTCACCAAA...CACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTCCCCCAATGAAGAGCTaGTGGGGCATGCGGACAGTG +
Preference number: 4 (lower is better)
Translates to: EALFSLGGAHLTQPRAASPPMKS*WGMRTV
Trigger: CACTGTCCGCATGCCCCACCAGCTCTTCATTGGGGG...AGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTTGGTCTCAGAGGTCTTaGCGCCCTCGGCATCCACGA +
Preference number: 4 (lower is better)
Translates to: EALFSLGGAHLTQPRAASWSQRS*RPRHPR
Trigger: TCGTGGATGCCGAGGGCGCCAAGACCTCTGAGACCA...AGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp CTCTCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGCCAGGGCCTCAATGGTaGCCAGCTCCTCCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: LSSEALFSLGGAHLTQPRPGPQW*PAPPGA
Trigger: AGCACCAGGAGGAGCTGGCCACCATTGAGGCCCTGG...CCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000472186.5
CDS-3UTR CCA 90 bp TTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCCATCCAGGGCCTCAATaGTGGCCAGCTCCTCCTGGT +
Preference number: 4 (lower is better)
Translates to: FRSFILPGRGTPHPAKGCHPGPQ*WPAPPG
Trigger: ACCAGGAGGAGCTGGCCACCATTGAGGCCCTGGATG...GCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGCATCCAGGGCCTCAATaGTGGCCAGCTCCTCCTGGT +
Preference number: 4 (lower is better)
Translates to: AASDWTEGVQDADMVCRQHPGPQ*WPAPPG
Trigger: ACCAGGAGGAGCTGGCCACCATTGAGGCCCTGGATG...CTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000472186.5
CDS-3UTR CCA 90 bp TCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTCATCCAGGGCCTCAATaGTGGCCAGCTCCTCCTGGT +
Preference number: 4 (lower is better)
Translates to: SEALFSLGGAHLTQPRAAHPGPQ*WPAPPG
Trigger: ACCAGGAGGAGCTGGCCACCATTGAGGCCCTGGATG...AGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000472186.5
CDS-3UTR CCA 90 bp TTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGACTGGGGGATGGTGGAGCCCTaGATCTTGTCACACCAGCCA +
Preference number: 4 (lower is better)
Translates to: LFSLGGAHLTQPRAASDWGMVEP*ILSHQP
Trigger: TGGCTGGTGTGACAAGATCCAGGGCTCCACCATCCC...CCAGTCAGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000472186.5
CDS-3UTR CCA 90 bp CAGCCAAGGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGCGGTTGGGTCTGGCCTaGTTGATGGGGATGGTGGAG +
Preference number: 4 (lower is better)
Translates to: QPRAASDWTEGVQDADMVRLGLA*LMGMVE
Trigger: CTCCACCATCCCCATCAACCAGGCCAGACCCAACCG...CACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GTGTCCCTGTCCAGCGGGTTGCCCACCTTCATCTTCCGCACCTCTTCTACCACTCGGTTGGGTCTGGCCTaGTTGATGGGGATGGTGGAG +
Preference number: 4 (lower is better)
Translates to: VSLSSGLPTFIFRTSSTTRLGLA*LMGMVE
Trigger: CTCCACCATCCCCATCAACCAGGCCAGACCCAACCG...AGTGGTAGAAGAGGTGCGGAAGATGAAGGTGGGCAACCCGCTGGACAGGGACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp TCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTCGGTTGGGTCTGGCCTaGTTGATGGGGATGGTGGAG +
Preference number: 4 (lower is better)
Translates to: SEALFSLGGAHLTQPRAARLGLA*LMGMVE
Trigger: CTCCACCATCCCCATCAACCAGGCCAGACCCAACCG...AGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp ATCACCACTGTGTTCCCGGCAGCCAGGCAGGCAGCTGTCTTCCAGGACAGCATCTGGTCTGAGAGTCTCTaGCCGACCAGGGAGCCAGAT +
Preference number: 4 (lower is better)
Translates to: ITTVFPAARQAAVFQDSIWSESL*PTREPD
Trigger: ATCTGGCTCCCTGGTCGGCCAGAGACTCTCAGACCA...GATGCTGTCCTGGAAGACAGCTGCCTGCCTGGCTGCCGGGAACACAGTGGTGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp GGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCTGGTCTGAGAGTCTCTaGCCGACCAGGGAGCCAGAT +
Preference number: 4 (lower is better)
Translates to: GLLLTGQRASKMQTWCAGWSESL*PTREPD
Trigger: ATCTGGCTCCCTGGTCGGCCAGAGACTCTCAGACCA...GCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp CTCTCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGCGCCGCAGACCAGTGTaGCCCCTTCCTTCACGCCAT +
Preference number: 4 (lower is better)
Translates to: LSSEALFSLGGAHLTQPRRRRPV*PLPSRH
Trigger: ATGGCGTGAAGGAAGGGGCCACACTGGTCTGCGGCG...CCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp CGGTGTCCCTGTCCAGCGGGTTGCCCACCTTCATCTTCCGCACCTCTTCTACCACCAGGCCAAATTCCGTaGCATTGGCCCGAGACAGCA +
Preference number: 4 (lower is better)
Translates to: RCPCPAGCPPSSSAPLLPPGQIP*HWPETA
Trigger: TGCTGTCTCGGGCCAATGCCACGGAATTTGGCCTGG...TGGTAGAAGAGGTGCGGAAGATGAAGGTGGGCAACCCGCTGGACAGGGACACCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp GACCTTTCTTCAGTATTCGAAGGTCACTGTCTTGACCCGCAGGTACTCGTTCAGACCGCGCGCAGGAGTTaGTGCGGGCGTCCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: DLSSVFEGHCLDPQVLVQTARRS*CGRPGQ
Trigger: CTGCCCGGGACGCCCGCACCAACTCCTGCGCGCGGT...CTGAACGAGTACCTGCGGGTCAAGACAGTGACCTTCGAATACTGAAGAAAGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp CATCCTTCTCAGCTTCCAGACAGTGGCAGCTGCTTCCTGCAGTCGCTGTCCCCATCTGTCACTCTGTCCTaGTGTCCAGGGGGTCGGCCT +
Preference number: 4 (lower is better)
Translates to: HPSQLPDSGSCFLQSLSPSVTLS*CPGGRP
Trigger: AGGCCGACCCCCTGGACACCAGGACAGAGTGACAGA...TGGGGACAGCGACTGCAGGAAGCAGCTGCCACTGTCTGGAAGCTGAGAAGGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000511283.2
3UTR CAA 72 bp CTGATCTTCCCCCACCGTCCATTCTCAAAGGCATCCTaGGCTGCGGCCACTGCCTTGTCGACGTCGGTGACT +
Preference number: 4 (lower is better)
Translates to: LIFPHRPFSKAS*AAATALSTSVT
Trigger: AGTCACCGACGTCGACAAGGCAGTGGCCGCAGCCAAGGATGCCTTTGAGAATGGACGGTGGGGGAAGATCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR TCA 90 bp GGCAGTACTCCATCAGCTTCACAAGGTGGGCATGGTGATTCTGCGGCCCGTGGTGCCACCGGGAGTACTTaGATACCGGCACTCCATCCT +
Preference number: 4 (lower is better)
Translates to: GSTPSASQGGHGDSAARGATGST*IPALHP
Trigger: AGGATGGAGTGCCGGTATTCAAGTACTCCCGGTGGC...ACCACGGGCCGCAGAATCACCATGCCCACCTTGTGAAGCTGATGGAGTACTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR TCA 90 bp TGTCCAGCGGGTTGCCCACCTTCATCTTCCGCACCTCTTCTACCACTCTCCGCAGCCACCGGGAGTACTTaGATACCGGCACTCCATCCT +
Preference number: 4 (lower is better)
Translates to: CPAGCPPSSSAPLLPLSAATGST*IPALHP
Trigger: AGGATGGAGTGCCGGTATTCAAGTACTCCCGGTGGC...TGCGGAGAGTGGTAGAAGAGGTGCGGAAGATGAAGGTGGGCAACCCGCTGGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR TCA 90 bp TCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTCCGGCTGGTCCCAGTTaGTCTTGGCTGTCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: SEALFSLGGAHLTQPRAAPAGPS*SWLSPS
Trigger: AGAAGGAGACAGCCAAGATCAACTGGGACCAGCCGG...AGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GTGTCCCTGTCCAGCGGGTTGCCCACCTTCATCTTCCGCACCTCTTCTACCACTCCGGCTGGTCCCAGTTaGTCTTGGCTGTCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: VSLSSGLPTFIFRTSSTTPAGPS*SWLSPS
Trigger: AGAAGGAGACAGCCAAGATCAACTGGGACCAGCCGG...AGTGGTAGAAGAGGTGCGGAAGATGAAGGTGGGCAACCCGCTGGACAGGGACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR TCA 90 bp GCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGCCGGCTGGTCCCAGTTaGTCTTGGCTGTCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: AASDWTEGVQDADMVCRQPAGPS*SWLSPS
Trigger: AGAAGGAGACAGCCAAGATCAACTGGGACCAGCCGG...CTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp AGTCCAAGGACAGGAGCATGGGTGGCTTTGAGCAGGCAAGTGACCCACAGCCGTCCGGCTGGTCCCAGTTaGTCTTGGCTGTCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: SPRTGAWVALSRQVTHSRPAGPS*SWLSPS
Trigger: AGAAGGAGACAGCCAAGATCAACTGGGACCAGCCGG...ACGGCTGTGGGTCACTTGCCTGCTCAAAGCCACCCATGCTCCTGTCCTTGGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493803.5
CDS-3UTR TCA 90 bp GGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCCACAGACGCGGCCCCTaGCTTGAAGAAATCAGTGGA +
Preference number: 4 (lower is better)
Translates to: GLLLTGQRASKMQTWCAGHRRGP*LEEISG
Trigger: TCCACTGATTTCTTCAAGTCAGGGGCCGCGTCTGTG...GCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp ACATCAGGATGGTCTGAGAGTCTCTGGCCGACCAGGGAGCCAGATCCTGGGAGGCACAGACGCGGCCCCTaGCTTGAAGAAATCAGTGGA +
Preference number: 4 (lower is better)
Translates to: TSGWSESLWPTREPDPGRHRRGP*LEEISG
Trigger: TCCACTGATTTCTTCAAGTCAGGGGCCGCGTCTGTG...CCTCCCAGGATCTGGCTCCCTGGTCGGCCAGAGACTCTCAGACCATCCTGATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR TCA 90 bp CTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGGGTGAGTGGGGTCACCTaGGCAGGCTTGATCACCACT +
Preference number: 4 (lower is better)
Translates to: LLLTGQRASKMQTWCAGRVSGVT*AGLITT
Trigger: AGTGGTGATCAAGCCTGCTCAGGTGACCCCACTCAC...CCTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTCACATCAGGATGGTCTaGGAGTCTCTGGCCGACCAG +
Preference number: 4 (lower is better)
Translates to: EALFSLGGAHLTQPRAASHIRMV*ESLADQ
Trigger: CTGGTCGGCCAGAGACTCTCAGACCATCCTGATGTG...AGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp CAGCCAAGGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGCACATCAGGATGGTCTaGGAGTCTCTGGCCGACCAG +
Preference number: 4 (lower is better)
Translates to: QPRAASDWTEGVQDADMVHIRMV*ESLADQ
Trigger: CTGGTCGGCCAGAGACTCTCAGACCATCCTGATGTG...CACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp TCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTCACATCAGGATGGTCTaGGAGTCTCTGGCCGACCAG +
Preference number: 4 (lower is better)
Translates to: SEALFSLGGAHLTQPRAAHIRMV*ESLADQ
Trigger: CTGGTCGGCCAGAGACTCTCAGACCATCCTGATGTG...AGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp ATTCCCGCCGCAGACCAGTGTGGCCCCTTCCTTCACGCCATGCTGGCAGTACTCCCTCTGTGGAGCCTGTaGACCCGATTTTCCTCACAT +
Preference number: 4 (lower is better)
Translates to: IPAADQCGPFLHAMLAVLPLWSL*TRFSSH
Trigger: ATGTGAGGAAAATCGGGTTCACAGGCTCCACAGAGG...GAGTACTGCCAGCATGGCGTGAAGGAAGGGGCCACACTGGTCTGCGGCGGGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR TCA 90 bp TCCGTGGCATTGGCCCGAGACAGCACGGCATCCAAGTCCCCATCAGCAAACCGAAAAGATGATGAGGGGTaGCTTCCCGCCCAGTTCCAG +
Preference number: 4 (lower is better)
Translates to: SVALARDSTASKSPSANRKDDEG*LPAQFQ
Trigger: CTGGAACTGGGCGGGAAGTCACCCCTCATCATCTTT...TCGGTTTGCTGATGGGGACTTGGATGCCGTGCTGTCTCGGGCCAATGCCACGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000455064.6
CDS-3UTR TCA 90 bp CCACTCTCCGCACGAACTCATCATGAATGGAGTCCTCCACAAAGAGTCGGCCTGACAAGGTGGGCATGGTaGTTCTGCGGCCCGTGGTCG +
Preference number: 4 (lower is better)
Translates to: PLSARTHHEWSPPQRVGLTRWAW*FCGPWS
Trigger: CGACCACGGGCCGCAGAATCACCATGCCCACCTTGT...CAGGCCGACTCTTTGTGGAGGACTCCATTCATGATGAGTTCGTGCGGAGAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR TCA 90 bp CGCAGACCAGTGTGGCCCCTTCCTTCACGCCATGCTGGCAGTACTCCATCAGCTCGAAGGTCACTGTCTTaGCCCGCAGGTACTCGTTCA +
Preference number: 4 (lower is better)
Translates to: RRPVWPLPSRHAGSTPSARRSLS*PAGTRS
Trigger: TGAACGAGTACCTGCGGGTCAAGACAGTGACCTTCG...AGCTGATGGAGTACTGCCAGCATGGCGTGAAGGAAGGGGCCACACTGGTCTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR TCA 90 bp GAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTCAGGTTAGACTTCTGTaGGCCGCAGCCCCGAAACTG +
Preference number: 4 (lower is better)
Translates to: EALFSLGGAHLTQPRAASQVRLL*AAAPKL
Trigger: CAGTTTCGGGGCTGCGGCTCACAGAAGTCTAACCTG...AGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
CDS-3UTR TCA 90 bp CTTCCTGCAGTCGCTGTCCCCAATAACTTTGGGCTCTCTGCCTTCCACTCTTCACCAGCCTGGCCCATCTaGTGGCCTCGGTCCCATAGC +
Preference number: 4 (lower is better)
Translates to: LPAVAVPNNFGLSAFHSSPAWPI*WPRSHS
Trigger: GCTATGGGACCGAGGCCATCAGATGGGCCAGGCTGG...TGAAGAGTGGAAGGCAGAGAGCCCAAAGTTATTGGGGACAGCGACTGCAGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR TCA 90 bp GTGAATGGCCTCTGCCGGCTGGTCCCAGTTGATCTTGGCTGTCTCCTTCTTCTGTCTTATCTCCGTGAATaGGGGTCCCAGGGGGTCGGC +
Preference number: 4 (lower is better)
Translates to: VNGLCRLVPVDLGCLLLLSYLRE*GSQGVG
Trigger: GCCGACCCCCTGGGACCCTCATTCACGGAGATAAGA...CAGAAGAAGGAGACAGCCAAGATCAACTGGGACCAGCCGGCAGAGGCCATTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493803.5
CDS-3UTR GCA 90 bp CAGTTTCTGTTCACAGGCCTCTGTCCAGGCTCCCGGCACCTTGTCGTTCCCGCGCAAAGCCTGTCCTTTTaGACGCCACCGGGAGTACTT +
Preference number: 4 (lower is better)
Translates to: QFLFTGLCPGSRHLVVPAQSLSF*TPPGVL
Trigger: AAGTACTCCCGGTGGCGTGCAAAAGGACAGGCTTTG...CGCGGGAACGACAAGGTGCCGGGAGCCTGGACAGAGGCCTGTGAACAGAAACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR GCA 90 bp CTGTCCCCAATAACTTTGGGCTCTCTGCCTTCCACTCTTCAATACCCAAGGAACGCCGAGGCCCCTCGGTaGCTAGGGAGCAGTGACGGG +
Preference number: 4 (lower is better)
Translates to: LSPITLGSLPSTLQYPRNAEAPR*LGSSDG
Trigger: CCCGTCACTGCTCCCTAGGCACCGAGGGGCCTCGGC...GTTCCTTGGGTATTGAAGAGTGGAAGGCAGAGAGCCCAAAGTTATTGGGGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR GCA 90 bp CTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGGACCTCACACTCCTTCTaGAGCAGCAGGTCTCCGGTG +
Preference number: 4 (lower is better)
Translates to: LLLTGQRASKMQTWCAGRTSHSF*SSRSPV
Trigger: CACCGGAGACCTGCTGCTGCAGAAGGAGTGTGAGGT...CCTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp CTCTCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGAGCGGTTGTACAGCGTaGTCACGGTGTCGTCCGGGA +
Preference number: 4 (lower is better)
Translates to: LSSEALFSLGGAHLTQPRSGCTA*SRCRPG
Trigger: TCCCGGACGACACCGTGAGCACGCTGTACAACCGCT...CCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp TTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGACTGGCGCAGTAACCAGCTCTaGCTCTGTCAGCTCAAGGAC +
Preference number: 4 (lower is better)
Translates to: LFSLGGAHLTQPRAASDWRSNQL*LCQLKD
Trigger: GTCCTTGAGCTGACAGAGGCAGAGCTGGTTACTGCG...CCAGTCAGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp GGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCCCACGTAGTCAATGCTaGACTCGCCCTCCTCATCGT +
Preference number: 4 (lower is better)
Translates to: GLLLTGQRASKMQTWCAGPRSQC*TRPPHR
Trigger: ACGATGAGGAGGGCGAGTGCAGCATTGACTACGTGG...GCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp TTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGACTGGGGGGCATGCGGACAGTaGGCTTGTTCACTGCCATTT +
Preference number: 4 (lower is better)
Translates to: LFSLGGAHLTQPRAASDWGACGQ*ACSLPF
Trigger: AAATGGCAGTGAACAAGCGCACTGTCCGCATGCCCC...CCAGTCAGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp TCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTAGAGCTGGTGGGGCATaGGGACAGTGCGCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: SEALFSLGGAHLTQPRAARAGGA*GQCACS
Trigger: TGAACAAGCGCACTGTCCGCATGCCCCACCAGCTCT...AGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp GCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGAGAGCTGGTGGGGCATaGGGACAGTGCGCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: AASDWTEGVQDADMVCRQRAGGA*GQCACS
Trigger: TGAACAAGCGCACTGTCCGCATGCCCCACCAGCTCT...CTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp CTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGGAGAGCTGGTGGGGCATaGGGACAGTGCGCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: LLLTGQRASKMQTWCAGRRAGGA*GQCACS
Trigger: TGAACAAGCGCACTGTCCGCATGCCCCACCAGCTCT...CCTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp TTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCAAAGGCATCCTTGGCTaGGGCCACTGCCTTGTCGAC +
Preference number: 4 (lower is better)
Translates to: FRSFILPGRGTPHPAKGCKGILG*GHCLVD
Trigger: GTCGACAAGGCAGTGGCCGCAGCCAAGGATGCCTTT...GCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp GTGTCCCTGTCCAGCGGGTTGCCCACCTTCATCTTCCGCACCTCTTCTACCACTAAAGGCATCCTTGGCTaGGGCCACTGCCTTGTCGAC +
Preference number: 4 (lower is better)
Translates to: VSLSSGLPTFIFRTSSTTKGILG*GHCLVD
Trigger: GTCGACAAGGCAGTGGCCGCAGCCAAGGATGCCTTT...AGTGGTAGAAGAGGTGCGGAAGATGAAGGTGGGCAACCCGCTGGACAGGGACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR GCA 90 bp GCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGAAAGGCATCCTTGGCTaGGGCCACTGCCTTGTCGAC +
Preference number: 4 (lower is better)
Translates to: AASDWTEGVQDADMVCRQKGILG*GHCLVD
Trigger: GTCGACAAGGCAGTGGCCGCAGCCAAGGATGCCTTT...CTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp CCAAATTCCGTGGCATTGGCCCGAGACAGCACGGCATCCAAGTCCCCATCAGCAAAAGGCATCCTTGGCTaGGGCCACTGCCTTGTCGAC +
Preference number: 4 (lower is better)
Translates to: PNSVALARDSTASKSPSAKGILG*GHCLVD
Trigger: GTCGACAAGGCAGTGGCCGCAGCCAAGGATGCCTTT...TGCTGATGGGGACTTGGATGCCGTGCTGTCTCGGGCCAATGCCACGGAATTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR GCA 90 bp GGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGCTCCTCCTGGTGCTaGTCCATGAGATCTGCCAAC +
Preference number: 4 (lower is better)
Translates to: GLLLTGQRASKMQTWCAGSSSWC*SMRSAN
Trigger: GTTGGCAGATCTCATGGAGCAGCACCAGGAGGAGCT...GCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000472186.5
CDS-3UTR GCA 90 bp TTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCAGGTCTGGATGGACATaGCCACGTGGGTCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: FRSFILPGRGTPHPAKGCRSGWT*PRGSSG
Trigger: CCCTGAAGACCCACGTGGGCATGTCCATCCAGACCT...GCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000472186.5
CDS-3UTR GCA 90 bp TCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTAGGTCTGGATGGACATaGCCACGTGGGTCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: SEALFSLGGAHLTQPRAARSGWT*PRGSSG
Trigger: CCCTGAAGACCCACGTGGGCATGTCCATCCAGACCT...AGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000472186.5
CDS-3UTR GCA 90 bp TTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTGGTCAAGGTCAGGTTaGGGTTGGGTCTGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: FRSFILPGRGTPHPAKGCWSRSG*GWVWPG
Trigger: ACCAGGCCAGACCCAACCGCAACCTGACCTTGACCA...GCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp GCATTGGCCCGAGACAGCACGGCATCCAAGTCCCCATCAGCAAACCGAGAGATGTGGTCAAGGTCAGGTTaGGGTTGGGTCTGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: ALARDSTASKSPSANREMWSRSG*GWVWPG
Trigger: ACCAGGCCAGACCCAACCGCAACCTGACCTTGACCA...CATCTCTCGGTTTGCTGATGGGGACTTGGATGCCGTGCTGTCTCGGGCCAATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR GCA 90 bp GAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTTGGTCAAGGTCAGGTTaGGGTTGGGTCTGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: EALFSLGGAHLTQPRAASWSRSG*GWVWPG
Trigger: ACCAGGCCAGACCCAACCGCAACCTGACCTTGACCA...AGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp TCCCTGGTGAAGACACCAGAAGCCAGGCCAAATTCCGTGGCATTGGCCCGAGACTGGTCAAGGTCAGGTTaGGGTTGGGTCTGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: SLVKTPEARPNSVALARDWSRSG*GWVWPG
Trigger: ACCAGGCCAGACCCAACCGCAACCTGACCTTGACCA...GTCTCGGGCCAATGCCACGGAATTTGGCCTGGCTTCTGGTGTCTTCACCAGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR GCA 90 bp TTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGACTGGCCTTCCTTCACGCCATaGTGGCAGTACTCCATCAGC +
Preference number: 4 (lower is better)
Translates to: LFSLGGAHLTQPRAASDWPSFTP*WQYSIS
Trigger: GCTGATGGAGTACTGCCAGCATGGCGTGAAGGAAGG...CCAGTCAGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp GGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCCCTTCCTTCACGCCATaGTGGCAGTACTCCATCAGC +
Preference number: 4 (lower is better)
Translates to: GLLLTGQRASKMQTWCAGPSFTP*WQYSIS
Trigger: GCTGATGGAGTACTGCCAGCATGGCGTGAAGGAAGG...GCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp CTCATCATGAATGGAGTCCTCCACAAAGAGTCGGCCTGCTGCAATGCAATTCTCGCGCGCAGGAGTTGGTaGGGGCGTCCCGGGCAGGTT +
Preference number: 4 (lower is better)
Translates to: LIMNGVLHKESACCNAILARRSW*GRPGQV
Trigger: AACCTGCCCGGGACGCCCGCACCAACTCCTGCGCGC...GAGAATTGCATTGCAGCAGGCCGACTCTTTGTGGAGGACTCCATTCATGATGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR GCA 90 bp TTCTCAGCTTCCAGACAGTGGCAGCTGCTTCCTGCAGTCGCTGTCCCCAATAACCTGGGAGGCCCAGCCTaGGCCCACTTTGGAAGCATC +
Preference number: 4 (lower is better)
Translates to: FSASRQWQLLPAVAVPNNLGGPA*AHFGSI
Trigger: GATGCTTCCAAAGTGGGCGCAGGCTGGGCCTCCCAG...GTTATTGGGGACAGCGACTGCAGGAAGCAGCTGCCACTGTCTGGAAGCTGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR CCA 90 bp CAGCCAAGGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGATGGCCTCTGCCGGCTaGTCCCAGTTGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: QPRAASDWTEGVQDADMVMASAG*SQLILA
Trigger: AGCCAAGATCAACTGGGACCAGCCGGCAGAGGCCAT...CACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp CTCTCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGGATCCAGTTGTGAATaGCCTCTGCCGGCTGGTCCC +
Preference number: 4 (lower is better)
Translates to: LSSEALFSLGGAHLTQPRGSSCE*PLPAGP
Trigger: GGGACCAGCCGGCAGAGGCCATTCACAACTGGATCC...CCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp TCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTTTTGGTGACCACCCCTaGCCGATGGGCTCCTGGGAT +
Preference number: 4 (lower is better)
Translates to: SSEALFSLGGAHLTQPRAFGDHP*PMGSWD
Trigger: ATCCCAGGAGCCCATCGGCCAGGGGTGGTCACCAAA...AGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCCAACCTCCAGGACTTTaGGGAGGATCCGCTGCCAAA +
Preference number: 4 (lower is better)
Translates to: GLLLTGQRASKMQTWCAGQPPGL*GGSAAK
Trigger: TTTGGCAGCGGATCCTCCCCAAAGTCCTGGAGGTTG...GCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp CGATTTTCCTCACATCAGGATGGTCTGAGAGTCTCTGGCCGACCAGGGAGCCAGCCAATGAAGAGCTGGTaGGGCATGCGGACAGTGCGC +
Preference number: 4 (lower is better)
Translates to: RFSSHQDGLRVSGRPGSQPMKSW*GMRTVR
Trigger: GCGCACTGTCCGCATGCCCCACCAGCTCTTCATTGG...CTGGCTCCCTGGTCGGCCAGAGACTCTCAGACCATCCTGATGTGAGGAAAATCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp TCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTCCAATGAAGAGCTGGTaGGGCATGCGGACAGTGCGC +
Preference number: 4 (lower is better)
Translates to: SSEALFSLGGAHLTQPRAPMKSW*GMRTVR
Trigger: GCGCACTGTCCGCATGCCCCACCAGCTCTTCATTGG...AGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp CTCTCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGCCCCCAATGAAGAGCTaGTGGGGCATGCGGACAGTG +
Preference number: 4 (lower is better)
Translates to: LSSEALFSLGGAHLTQPRPPMKS*WGMRTV
Trigger: CACTGTCCGCATGCCCCACCAGCTCTTCATTGGGGG...CCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp TCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTCCCCCAATGAAGAGCTaGTGGGGCATGCGGACAGTG +
Preference number: 4 (lower is better)
Translates to: SSEALFSLGGAHLTQPRAPPMKS*WGMRTV
Trigger: CACTGTCCGCATGCCCCACCAGCTCTTCATTGGGGG...AGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp CGATTTTCCTCACATCAGGATGGTCTGAGAGTCTCTGGCCGACCAGGGAGCCAGTGGTCTCAGAGGTCTTaGCGCCCTCGGCATCCACGA +
Preference number: 4 (lower is better)
Translates to: RFSSHQDGLRVSGRPGSQWSQRS*RPRHPR
Trigger: TCGTGGATGCCGAGGGCGCCAAGACCTCTGAGACCA...CTGGCTCCCTGGTCGGCCAGAGACTCTCAGACCATCCTGATGTGAGGAAAATCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp TCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTTGGTCTCAGAGGTCTTaGCGCCCTCGGCATCCACGA +
Preference number: 4 (lower is better)
Translates to: SSEALFSLGGAHLTQPRAWSQRS*RPRHPR
Trigger: TCGTGGATGCCGAGGGCGCCAAGACCTCTGAGACCA...AGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp TTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGACTGGTCTCAAAGGCATCCTTaGCTGCGGCCACTGCCTTGT +
Preference number: 4 (lower is better)
Translates to: LFSLGGAHLTQPRAASDWSQRHP*LRPLPC
Trigger: ACAAGGCAGTGGCCGCAGCCAAGGATGCCTTTGAGA...CCAGTCAGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp CAGCCAAGGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGAGCGGAAGGTCTGGATaGACATGCCCACGTGGGTCT +
Preference number: 4 (lower is better)
Translates to: QPRAASDWTEGVQDADMVSGRSG*TCPRGS
Trigger: AGACCCACGTGGGCATGTCCATCCAGACCTTCCGCT...CACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGGGATGGTGGAGCCCTaGATCTTGTCACACCAGCCA +
Preference number: 4 (lower is better)
Translates to: EALFSLGGAHLTQPRAASGMVEP*ILSHQP
Trigger: TGGCTGGTGTGACAAGATCCAGGGCTCCACCATCCC...AGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000472186.5
CDS-3UTR CCA 90 bp CAGCCAAGGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGGGGATGGTGGAGCCCTaGATCTTGTCACACCAGCCA +
Preference number: 4 (lower is better)
Translates to: QPRAASDWTEGVQDADMVGMVEP*ILSHQP
Trigger: TGGCTGGTGTGACAAGATCCAGGGCTCCACCATCCC...CACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCCTTCAAGGCTGTGAGTaGGGTCACCTGAGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: GLLLTGQRASKMQTWCAGLQGCE*GHLSRL
Trigger: AAGCCTGCTCAGGTGACCCCACTCACAGCCTTGAAG...GCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp TCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTGGTCTGAGAGTCTCTaGCCGACCAGGGAGCCAGAT +
Preference number: 4 (lower is better)
Translates to: SEALFSLGGAHLTQPRAAWSESL*PTREPD
Trigger: ATCTGGCTCCCTGGTCGGCCAGAGACTCTCAGACCA...AGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGTGGTCTGAGAGTCTCTaGCCGACCAGGGAGCCAGAT +
Preference number: 4 (lower is better)
Translates to: AASDWTEGVQDADMVCRQWSESL*PTREPD
Trigger: ATCTGGCTCCCTGGTCGGCCAGAGACTCTCAGACCA...CTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp CACGGCATCCAAGTCCCCATCAGCAAACCGAGAGATGATCATGACAGGCCCGAACGCCGCAGACCAGTGTaGCCCCTTCCTTCACGCCAT +
Preference number: 4 (lower is better)
Translates to: HGIQVPISKPRDDHDRPERRRPV*PLPSRH
Trigger: ATGGCGTGAAGGAAGGGGCCACACTGGTCTGCGGCG...TTCGGGCCTGTCATGATCATCTCTCGGTTTGCTGATGGGGACTTGGATGCCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp TTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGACTGGCTCAAAGAAGAACCCTaGCCGAGGGACCTGATTCCC +
Preference number: 4 (lower is better)
Translates to: LFSLGGAHLTQPRAASDWLKEEP*PRDLIP
Trigger: GGGAATCAGGTCCCTCGGCCAGGGTTCTTCTTTGAG...CCAGTCAGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp CAGCCAAGGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGCCAGGCCAAATTCCGTaGCATTGGCCCGAGACAGCA +
Preference number: 4 (lower is better)
Translates to: QPRAASDWTEGVQDADMVPGQIP*HWPETA
Trigger: TGCTGTCTCGGGCCAATGCCACGGAATTTGGCCTGG...CACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTCCAGGCCAAATTCCGTaGCATTGGCCCGAGACAGCA +
Preference number: 4 (lower is better)
Translates to: EALFSLGGAHLTQPRAASPGQIP*HWPETA
Trigger: TGCTGTCTCGGGCCAATGCCACGGAATTTGGCCTGG...AGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGCCAGGCCAAATTCCGTaGCATTGGCCCGAGACAGCA +
Preference number: 4 (lower is better)
Translates to: AASDWTEGVQDADMVCRQPGQIP*HWPETA
Trigger: TGCTGTCTCGGGCCAATGCCACGGAATTTGGCCTGG...CTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp TTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGACTGGTCCAAGATGCAGACATaGTGTGCAGGCAGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: LFSLGGAHLTQPRAASDWSKMQT*CAGRRA
Trigger: AGCCCTCCTGCCTGCACACCATGTCTGCATCTTGGA...CCAGTCAGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GTTGACAAACACAGTGCCTGCCTGGAGCTTGTCACTGACATACAGGGCCTTGTTCTGGGAGCCAGGAGGTaGGACCTGTCCCCGCCAGTC +
Preference number: 4 (lower is better)
Translates to: VDKHSACLELVTDIQGLVLGARR*DLSPPV
Trigger: GACTGGCGGGGACAGGTCCCACCTCCTGGCTCCCAG...AACAAGGCCCTGTATGTCAGTGACAAGCTCCAGGCAGGCACTGTGTTTGTCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455064.6
CDS-3UTR CCA 90 bp ATCCTTCTCAGCTTCCAGACAGTGGCAGCTGCTTCCTGCAGTCGCTGTCCCCAATGTTTGGGCCCTGACTaGACTGGCTCTCCTCTCCGG +
Preference number: 4 (lower is better)
Translates to: ILLSFQTVAAASCSRCPQCLGPD*TGSPLR
Trigger: CCGGAGAGGAGAGCCAGTCCAGTCAGGGCCCAAACA...TTGGGGACAGCGACTGCAGGAAGCAGCTGCCACTGTCTGGAAGCTGAGAAGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000511283.2
CDS-3UTR CCA 90 bp TTCTGTTCACAGGCCTCTGTCCAGGCTCCCGGCACCTTGTCGTTCCCGCGGATCCTGGCAGGTACATGTTaGGCTCCCACCTGTACATCA +
Preference number: 4 (lower is better)
Translates to: FCSQASVQAPGTLSFPRILAGTC*APTCTS
Trigger: TGATGTACAGGTGGGAGCCCAACATGTACCTGCCAG...GATCCGCGGGAACGACAAGGTGCCGGGAGCCTGGACAGAGGCCTGTGAACAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR CCA 90 bp GTTTCTGTTCACAGGCCTCTGTCCAGGCTCCCGGCACCTTGTCGTTCCCGCGGACCCAGAACAGAGAAGTaGGTAAACTGCCTCGGACAC +
Preference number: 4 (lower is better)
Translates to: VSVHRPLSRLPAPCRSRGPRTEK*VNCLGH
Trigger: GTGTCCGAGGCAGTTTACCCACTTCTCTGTTCTGGG...TCCGCGGGAACGACAAGGTGCCGGGAGCCTGGACAGAGGCCTGTGAACAGAAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493803.5
CDS-3UTR TCA 90 bp TTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCGTGCCTAGGGAGCAGTaGCGGGTGATAGATGATGGA +
Preference number: 4 (lower is better)
Translates to: FRSFILPGRGTPHPAKGCVPREQ*RVIDDG
Trigger: TCCATCATCTATCACCCGTCACTGCTCCCTAGGCAC...GCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp CAGCCAAGGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGGTGCCTAGGGAGCAGTaGCGGGTGATAGATGATGGA +
Preference number: 4 (lower is better)
Translates to: QPRAASDWTEGVQDADMVVPREQ*RVIDDG
Trigger: TCCATCATCTATCACCCGTCACTGCTCCCTAGGCAC...CACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp TCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTGTGCCTAGGGAGCAGTaGCGGGTGATAGATGATGGA +
Preference number: 4 (lower is better)
Translates to: SEALFSLGGAHLTQPRAAVPREQ*RVIDDG
Trigger: TCCATCATCTATCACCCGTCACTGCTCCCTAGGCAC...AGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGGTGTTCAGCGTTGAGTTaGAAAATGTCAGTTTCTGTT +
Preference number: 4 (lower is better)
Translates to: VGGAVHPGSRGRGPQPRGCSALS*KMSVSV
Trigger: AACAGAAACTGACATTTTTCAACTCAACGCTGAACA...CCCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGTGTTCAGCGTTGAGTTaGAAAATGTCAGTTTCTGTT +
Preference number: 4 (lower is better)
Translates to: GGRCCAPRLKREGAPATRCSALS*KMSVSV
Trigger: AACAGAAACTGACATTTTTCAACTCAACGCTGAACA...CCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp CCCAAAGAGGATGAGTCCTGCTTTGGTGACCACCCCTGGCCGATGGGCTCCTGGTTGCCATCCTCCAGCTaGATATTCTTCACCAGCAGC +
Preference number: 4 (lower is better)
Translates to: PKEDESCFGDHPWPMGSWLPSSS*IFFTSS
Trigger: GCTGCTGGTGAAGAATATTCAGCTGGAGGATGGCAA...CCAGGAGCCCATCGGCCAGGGGTGGTCACCAAAGCAGGACTCATCCTCTTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR TCA 90 bp CAGCCAAGGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGCACAGACGCGGCCCCTaGCTTGAAGAAATCAGTGGA +
Preference number: 4 (lower is better)
Translates to: QPRAASDWTEGVQDADMVHRRGP*LEEISG
Trigger: TCCACTGATTTCTTCAAGTCAGGGGCCGCGTCTGTG...CACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp CTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGGCACAGACGCGGCCCCTaGCTTGAAGAAATCAGTGGA +
Preference number: 4 (lower is better)
Translates to: LLLTGQRASKMQTWCAGRHRRGP*LEEISG
Trigger: TCCACTGATTTCTTCAAGTCAGGGGCCGCGTCTGTG...CCTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTCACAGACGCGGCCCCTaGCTTGAAGAAATCAGTGGA +
Preference number: 4 (lower is better)
Translates to: EALFSLGGAHLTQPRAASHRRGP*LEEISG
Trigger: TCCACTGATTTCTTCAAGTCAGGGGCCGCGTCTGTG...AGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp TCCCGCGCACTGATCTTCCCCCACCGTCCATTCTCAAAGGCATCCTTGGCTGCGTTCCATCGGTGGGATTaGTGGTCTCAGAGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: SRALIFPHRPFSKASLAAFHRWD*WSQRSW
Trigger: CCAAGACCTCTGAGACCATCAATCCCACCGATGGAA...CGCAGCCAAGGATGCCTTTGAGAATGGACGGTGGGGGAAGATCAGTGCGCGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR TCA 90 bp TTTGATGCCTTCAGGGAAGAGGAAGCGGTTGTACAGCGTGCTCACGGTGTCGTCCCTTGTCGACGTCGGTaGCTTGGGCCAGGGATACCT +
Preference number: 4 (lower is better)
Translates to: FDAFREEEAVVQRAHGVVPCRRR*LGPGIP
Trigger: AGGTATCCCTGGCCCAAGTCACCGACGTCGACAAGG...GACGACACCGTGAGCACGCTGTACAACCGCTTCCTCTTCCCTGAAGGCATCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR TCA 90 bp TCTTCCACGTCTGTGAAAACAGTTGGCTCAAAGAAGAACCCTGGCCGAGGGACCTGGGTCTGGCCTGGTTaGTGGGGATGGTGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: SSTSVKTVGSKKNPGRGTWVWPG*WGWWSP
Trigger: AGGGCTCCACCATCCCCATCAACCAGGCCAGACCCA...GGTCCCTCGGCCAGGGTTCTTCTTTGAGCCAACTGTTTTCACAGACGTGGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR TCA 90 bp ATGTCCCTGGTGAAGACACCAGAAGCCAGGCCAAATTCCGTGGCATTGGCCCGACACATCAGGATGGTCTaGGAGTCTCTGGCCGACCAG +
Preference number: 4 (lower is better)
Translates to: MSLVKTPEARPNSVALARHIRMV*ESLADQ
Trigger: CTGGTCGGCCAGAGACTCTCAGACCATCCTGATGTG...TCGGGCCAATGCCACGGAATTTGGCCTGGCTTCTGGTGTCTTCACCAGGGACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR TCA 90 bp TCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTCACATCAGGATGGTCTaGGAGTCTCTGGCCGACCAG +
Preference number: 4 (lower is better)
Translates to: SSEALFSLGGAHLTQPRAHIRMV*ESLADQ
Trigger: CTGGTCGGCCAGAGACTCTCAGACCATCCTGATGTG...AGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCCCTCTGTGGAGCCTGTaGACCCGATTTTCCTCACAT +
Preference number: 4 (lower is better)
Translates to: GLLLTGQRASKMQTWCAGPLWSL*TRFSSH
Trigger: ATGTGAGGAAAATCGGGTTCACAGGCTCCACAGAGG...GCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp TTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGACTGGCCTCTGTGGAGCCTGTaGACCCGATTTTCCTCACAT +
Preference number: 4 (lower is better)
Translates to: LFSLGGAHLTQPRAASDWPLWSL*TRFSSH
Trigger: ATGTGAGGAAAATCGGGTTCACAGGCTCCACAGAGG...CCAGTCAGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTAAAGATGATGAGGGGTaGCTTCCCGCCCAGTTCCAG +
Preference number: 4 (lower is better)
Translates to: EALFSLGGAHLTQPRAASKDDEG*LPAQFQ
Trigger: CTGGAACTGGGCGGGAAGTCACCCCTCATCATCTTT...AGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp TTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGACTGGCAAATCCAGACTGTTTaGATCCTCCGAAGGGAGCGG +
Preference number: 4 (lower is better)
Translates to: LFSLGGAHLTQPRAASDWQIQTV*ILRRER
Trigger: CCGCTCCCTTCGGAGGATTCAAACAGTCTGGATTTG...CCAGTCAGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp TTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCCGAAGGTCACTGTCTTaGCCCGCAGGTACTCGTTCA +
Preference number: 4 (lower is better)
Translates to: FRSFILPGRGTPHPAKGCRRSLS*PAGTRS
Trigger: TGAACGAGTACCTGCGGGTCAAGACAGTGACCTTCG...GCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GCATTGGCCCGAGACAGCACGGCATCCAAGTCCCCATCAGCAAACCGAGAGATGCGAAGGTCACTGTCTTaGCCCGCAGGTACTCGTTCA +
Preference number: 4 (lower is better)
Translates to: ALARDSTASKSPSANREMRRSLS*PAGTRS
Trigger: TGAACGAGTACCTGCGGGTCAAGACAGTGACCTTCG...CATCTCTCGGTTTGCTGATGGGGACTTGGATGCCGTGCTGTCTCGGGCCAATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR TCA 90 bp GCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGCGAAGGTCACTGTCTTaGCCCGCAGGTACTCGTTCA +
Preference number: 4 (lower is better)
Translates to: AASDWTEGVQDADMVCRQRRSLS*PAGTRS
Trigger: TGAACGAGTACCTGCGGGTCAAGACAGTGACCTTCG...CTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp CCTGTGCTCAGGACCAGCCGGGTGGTCAGGGACAAATCAGGGTCAGTGTTCCTTCCTTTCTTATCTCCGTaGATGAGGGTCCCAGGGGGT +
Preference number: 4 (lower is better)
Translates to: PVLRTSRVVRDKSGSVFLPFLSP*MRVPGG
Trigger: ACCCCCTGGGACCCTCATTCACGGAGATAAGAAAGG...AAGGAACACTGACCCTGATTTGTCCCTGACCACCCGGCTGGTCCTGAGCACAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493803.5
CDS-3UTR GCA 90 bp TCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTAGGGTTGGAAGGACCTaGCATGTGCTACGGACACAG +
Preference number: 4 (lower is better)
Translates to: SEALFSLGGAHLTQPRAARVGRT*HVLRTQ
Trigger: CTGTGTCCGTAGCACATGGCAGGTCCTTCCAACCCT...AGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273450.7
CDS-3UTR GCA 90 bp GGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCCAAAGCCTGTCCTTTTaGACGCCACCGGGAGTACTT +
Preference number: 4 (lower is better)
Translates to: GLLLTGQRASKMQTWCAGQSLSF*TPPGVL
Trigger: AAGTACTCCCGGTGGCGTGCAAAAGGACAGGCTTTG...GCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp CTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGGGTTGTGAATGGCCTCTaGCGGCTGGTCCCAGTTGAT +
Preference number: 4 (lower is better)
Translates to: LLLTGQRASKMQTWCAGRVVNGL*RLVPVD
Trigger: ATCAACTGGGACCAGCCGGCAGAGGCCATTCACAAC...CCTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp CCAAATTCCGTGGCATTGGCCCGAGACAGCACGGCATCCAAGTCCCCATCAGCAGTTGTGAATGGCCTCTaGCGGCTGGTCCCAGTTGAT +
Preference number: 4 (lower is better)
Translates to: PNSVALARDSTASKSPSAVVNGL*RLVPVD
Trigger: ATCAACTGGGACCAGCCGGCAGAGGCCATTCACAAC...TGCTGATGGGGACTTGGATGCCGTGCTGTCTCGGGCCAATGCCACGGAATTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR GCA 90 bp GCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGGTTGTGAATGGCCTCTaGCGGCTGGTCCCAGTTGAT +
Preference number: 4 (lower is better)
Translates to: AASDWTEGVQDADMVCRQVVNGL*RLVPVD
Trigger: ATCAACTGGGACCAGCCGGCAGAGGCCATTCACAAC...CTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp CAGGATGGTCTGAGAGTCTCTGGCCGACCAGGGAGCCAGATCCTGGGAGGACGTAAGGACACTGCTGGCTaGCCCCTTAAAGAAGTTCGA +
Preference number: 4 (lower is better)
Translates to: QDGLRVSGRPGSQILGGRKDTAG*PLKEVR
Trigger: TCGAACTTCTTTAAGGGGGCAGCCAGCAGTGTCCTT...ACGTCCTCCCAGGATCTGGCTCCCTGGTCGGCCAGAGACTCTCAGACCATCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR GCA 90 bp GAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTCGCAGTAACCAGCTCTaGCTCTGTCAGCTCAAGGAC +
Preference number: 4 (lower is better)
Translates to: EALFSLGGAHLTQPRAASRSNQL*LCQLKD
Trigger: GTCCTTGAGCTGACAGAGGCAGAGCTGGTTACTGCG...AGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp TCTCCGCACGAACTCATCATGAATGGAGTCCTCCACAAAGAGTCGGCCTGCTGCTTGGGGAGGATCCGCTaGCAAACACTCCGCACAGCC +
Preference number: 4 (lower is better)
Translates to: SPHELIMNGVLHKESACCLGRIR*QTLRTA
Trigger: GGCTGTGCGGAGTGTTTGGCAGCGGATCCTCCCCAA...GCAGCAGGCCGACTCTTTGTGGAGGACTCCATTCATGATGAGTTCGTGCGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR GCA 90 bp TTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCCCACGTAGTCAATGCTaGACTCGCCCTCCTCATCGT +
Preference number: 4 (lower is better)
Translates to: FRSFILPGRGTPHPAKGCPRSQC*TRPPHR
Trigger: ACGATGAGGAGGGCGAGTGCAGCATTGACTACGTGG...GCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp AGTCTCTGGCCGACCAGGGAGCCAGATCCTGGGAGGACGTTAACCACACCTTTGCCACGTAGTCAATGCTaGACTCGCCCTCCTCATCGT +
Preference number: 4 (lower is better)
Translates to: SLWPTREPDPGRTLTTPLPRSQC*TRPPHR
Trigger: ACGATGAGGAGGGCGAGTGCAGCATTGACTACGTGG...CAAAGGTGTGGTTAACGTCCTCCCAGGATCTGGCTCCCTGGTCGGCCAGAGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR GCA 90 bp CTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGGCCACGTAGTCAATGCTaGACTCGCCCTCCTCATCGT +
Preference number: 4 (lower is better)
Translates to: LLLTGQRASKMQTWCAGRPRSQC*TRPPHR
Trigger: ACGATGAGGAGGGCGAGTGCAGCATTGACTACGTGG...CCTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp GAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGGGGCATGCGGACAGTaGGCTTGTTCACTGCCATTT +
Preference number: 4 (lower is better)
Translates to: EALFSLGGAHLTQPRAASGACGQ*ACSLPF
Trigger: AAATGGCAGTGAACAAGCGCACTGTCCGCATGCCCC...AGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp GCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGGGGGCATGCGGACAGTaGGCTTGTTCACTGCCATTT +
Preference number: 4 (lower is better)
Translates to: AASDWTEGVQDADMVCRQGACGQ*ACSLPF
Trigger: AAATGGCAGTGAACAAGCGCACTGTCCGCATGCCCC...CTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp CTCTCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGAGAGCTGGTGGGGCATaGGGACAGTGCGCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: LSSEALFSLGGAHLTQPRRAGGA*GQCACS
Trigger: TGAACAAGCGCACTGTCCGCATGCCCCACCAGCTCT...CCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp ATGCCGGCCTTTAATGTCAGCTCTGCAAACTTCAAGGCTGTGAGTGGGGTCACCCTTGGCTGCGGCCACTaGCTTGTCGACGTCGGTGAC +
Preference number: 4 (lower is better)
Translates to: MPAFNVSSANFKAVSGVTLGCGH*LVDVGD
Trigger: GTCACCGACGTCGACAAGGCAGTGGCCGCAGCCAAG...GGTGACCCCACTCACAGCCTTGAAGTTTGCAGAGCTGACATTAAAGGCCGGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR GCA 90 bp CTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGGAGCTCCTCCTGGTGCTaGTCCATGAGATCTGCCAAC +
Preference number: 4 (lower is better)
Translates to: LLLTGQRASKMQTWCAGRSSSWC*SMRSAN
Trigger: GTTGGCAGATCTCATGGAGCAGCACCAGGAGGAGCT...CCTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000472186.5
CDS-3UTR GCA 90 bp GAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTAGCTCCTCCTGGTGCTaGTCCATGAGATCTGCCAAC +
Preference number: 4 (lower is better)
Translates to: EALFSLGGAHLTQPRAASSSSWC*SMRSAN
Trigger: GTTGGCAGATCTCATGGAGCAGCACCAGGAGGAGCT...AGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000472186.5
CDS-3UTR GCA 90 bp GCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGAGCTCCTCCTGGTGCTaGTCCATGAGATCTGCCAAC +
Preference number: 4 (lower is better)
Translates to: AASDWTEGVQDADMVCRQSSSWC*SMRSAN
Trigger: GTTGGCAGATCTCATGGAGCAGCACCAGGAGGAGCT...CTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000472186.5
CDS-3UTR GCA 90 bp GTTGCCCACCTTCATCTTCCGCACCTCTTCTACCACTCTCCGCACGAACTCATCCCCTGTCCAGCGGGTTaGCCACCTTCATCTTCCGCA +
Preference number: 4 (lower is better)
Translates to: VAHLHLPHLFYHSPHELIPCPAG*PPSSSA
Trigger: TGCGGAAGATGAAGGTGGGCAACCCGCTGGACAGGG...GATGAGTTCGTGCGGAGAGTGGTAGAAGAGGTGCGGAAGATGAAGGTGGGCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR GCA 90 bp GCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGCCTTCCTTCACGCCATaGTGGCAGTACTCCATCAGC +
Preference number: 4 (lower is better)
Translates to: AASDWTEGVQDADMVCRQPSFTP*WQYSIS
Trigger: GCTGATGGAGTACTGCCAGCATGGCGTGAAGGAAGG...CTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp GAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTCCTTCCTTCACGCCATaGTGGCAGTACTCCATCAGC +
Preference number: 4 (lower is better)
Translates to: EALFSLGGAHLTQPRAASPSFTP*WQYSIS
Trigger: GCTGATGGAGTACTGCCAGCATGGCGTGAAGGAAGG...AGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp GTTTCTGTTCACAGGCCTCTGTCCAGGCTCCCGGCACCTTGTCGTTCCCGCGGAAGTGACCCACAGCCGTaGCCTTACCATTTTGTCATC +
Preference number: 4 (lower is better)
Translates to: VSVHRPLSRLPAPCRSRGSDPQP*PYHFVI
Trigger: GATGACAAAATGGTAAGGGCACGGCTGTGGGTCACT...TCCGCGGGAACGACAAGGTGCCGGGAGCCTGGACAGAGGCCTGTGAACAGAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493803.5
CDS-3UTR CCA 90 bp CGCAGACCAGTGTGGCCCCTTCCTTCACGCCATGCTGGCAGTACTCCATCAGCTTCGGCCCCCAAAGCCTaGTATTTTGCCACCACATCA +
Preference number: 4 (lower is better)
Translates to: RRPVWPLPSRHAGSTPSASAPKA*YFATTS
Trigger: TGATGTGGTGGCAAAATACCAGGCTTTGGGGGCCGA...AGCTGATGGAGTACTGCCAGCATGGCGTGAAGGAAGGGGCCACACTGGTCTGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp CAGCCAAGGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGGAATCCCCTCATAGGTaGCTCCTTCCTCAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: QPRAASDWTEGVQDADMVESPHR*LLPQAE
Trigger: CTCAGCCTGAGGAAGGAGCCACCTATGAGGGGATTC...CACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp TTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCGAATCCCCTCATAGGTaGCTCCTTCCTCAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: FRSFILPGRGTPHPAKGCESPHR*LLPQAE
Trigger: CTCAGCCTGAGGAAGGAGCCACCTATGAGGGGATTC...GCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp TCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTATGGCCTCTGCCGGCTaGTCCCAGTTGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: SSEALFSLGGAHLTQPRAMASAG*SQLILA
Trigger: AGCCAAGATCAACTGGGACCAGCCGGCAGAGGCCAT...AGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GTTGCCCACCTTCATCTTCCGCACCTCTTCTACCACTCTCCGCACGAACTCATCGGATCCAGTTGTGAATaGCCTCTGCCGGCTGGTCCC +
Preference number: 4 (lower is better)
Translates to: VAHLHLPHLFYHSPHELIGSSCE*PLPAGP
Trigger: GGGACCAGCCGGCAGAGGCCATTCACAACTGGATCC...GATGAGTTCGTGCGGAGAGTGGTAGAAGAGGTGCGGAAGATGAAGGTGGGCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp CGTGTTGACAAACACAGTGCCTGCCTGGAGCTTGTCACTGACATACAGGGCCTTTGGCCGATGGGCTCCTaGGATGGGCAAAGCGTCTCC +
Preference number: 4 (lower is better)
Translates to: RVDKHSACLELVTDIQGLWPMGS*DGQSVS
Trigger: GGAGACGCTTTGCCCATCCCAGGAGCCCATCGGCCA...AAGGCCCTGTATGTCAGTGACAAGCTCCAGGCAGGCACTGTGTTTGTCAACACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp TTGTCATCATTCCCAAAGAGGATGAGTCCTGCTTTGGTGACCACCCCTGGCCGAACCACCCCTGGCCGATaGGCTCCTGGGATGGGCAAA +
Preference number: 4 (lower is better)
Translates to: LSSFPKRMSPALVTTPGRTTPGR*APGMGK
Trigger: TTTGCCCATCCCAGGAGCCCATCGGCCAGGGGTGGT...TCGGCCAGGGGTGGTCACCAAAGCAGGACTCATCCTCTTTGGGAATGATGACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000493803.5
CDS-3UTR CCA 90 bp AAGGGTAGGGAGCCCAGCTTTCCCAGAACAGAGAAGTGGGTAAACTGCCTCGGATTTGGTGACCACCCCTaGCCGATGGGCTCCTGGGAT +
Preference number: 4 (lower is better)
Translates to: KGREPSFPRTEKWVNCLGFGDHP*PMGSWD
Trigger: ATCCCAGGAGCCCATCGGCCAGGGGTGGTCACCAAA...TCCGAGGCAGTTTACCCACTTCTCTGTTCTGGGAAAGCTGGGCTCCCTACCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493803.5
CDS-3UTR CCA 90 bp TCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTCAACCTCCAGGACTTTaGGGAGGATCCGCTGCCAAA +
Preference number: 4 (lower is better)
Translates to: SEALFSLGGAHLTQPRAAQPPGL*GGSAAK
Trigger: TTTGGCAGCGGATCCTCCCCAAAGTCCTGGAGGTTG...AGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp TCAGGCAAAGCCTGTCCTTTTGCACGCCACCGGGAGTACTTGAATACCGGCACTCCAATGAAGAGCTGGTaGGGCATGCGGACAGTGCGC +
Preference number: 4 (lower is better)
Translates to: SGKACPFARHREYLNTGTPMKSW*GMRTVR
Trigger: GCGCACTGTCCGCATGCCCCACCAGCTCTTCATTGG...AGTGCCGGTATTCAAGTACTCCCGGTGGCGTGCAAAAGGACAGGCTTTGCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR CCA 90 bp GGTGACTTGGGCCAGGGATACCTGGCAGATGACACTTCCATCGGTGGGATTGATCCCCCAATGAAGAGCTaGTGGGGCATGCGGACAGTG +
Preference number: 4 (lower is better)
Translates to: GDLGQGYLADDTSIGGIDPPMKS*WGMRTV
Trigger: CACTGTCCGCATGCCCCACCAGCTCTTCATTGGGGG...ATCAATCCCACCGATGGAAGTGTCATCTGCCAGGTATCCCTGGCCCAAGTCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR CCA 90 bp GAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTTGGGCCAGGGATACCTaGCAGATGACACTTCCATCG +
Preference number: 4 (lower is better)
Translates to: EALFSLGGAHLTQPRAASWARDT*QMTLPS
Trigger: CGATGGAAGTGTCATCTGCCAGGTATCCCTGGCCCA...AGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp CAGCCAAGGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGGGCCAGGGATACCTaGCAGATGACACTTCCATCG +
Preference number: 4 (lower is better)
Translates to: QPRAASDWTEGVQDADMVWARDT*QMTLPS
Trigger: CGATGGAAGTGTCATCTGCCAGGTATCCCTGGCCCA...CACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGTGGGCCAGGGATACCTaGCAGATGACACTTCCATCG +
Preference number: 4 (lower is better)
Translates to: AASDWTEGVQDADMVCRQWARDT*QMTLPS
Trigger: CGATGGAAGTGTCATCTGCCAGGTATCCCTGGCCCA...CTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp CTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGGTGGGCCAGGGATACCTaGCAGATGACACTTCCATCG +
Preference number: 4 (lower is better)
Translates to: LLLTGQRASKMQTWCAGRWARDT*QMTLPS
Trigger: CGATGGAAGTGTCATCTGCCAGGTATCCCTGGCCCA...CCTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp TTTGATGCCTTCAGGGAAGAGGAAGCGGTTGTACAGCGTGCTCACGGTGTCGTCTCGACGTCGGTGACTTaGGCCAGGGATACCTGGCAG +
Preference number: 4 (lower is better)
Translates to: FDAFREEEAVVQRAHGVVSTSVT*ARDTWQ
Trigger: CTGCCAGGTATCCCTGGCCCAAGTCACCGACGTCGA...GACGACACCGTGAGCACGCTGTACAACCGCTTCCTCTTCCCTGAAGGCATCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR CCA 90 bp TTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTCTCAAAGGCATCCTTaGCTGCGGCCACTGCCTTGT +
Preference number: 4 (lower is better)
Translates to: FRSFILPGRGTPHPAKGCSQRHP*LRPLPC
Trigger: ACAAGGCAGTGGCCGCAGCCAAGGATGCCTTTGAGA...GCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp CAGCCAAGGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTCTCAAAGGCATCCTTaGCTGCGGCCACTGCCTTGT +
Preference number: 4 (lower is better)
Translates to: QPRAASDWTEGVQDADMVSQRHP*LRPLPC
Trigger: ACAAGGCAGTGGCCGCAGCCAAGGATGCCTTTGAGA...CACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp CTCTCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGAGCGGAAGGTCTGGATaGACATGCCCACGTGGGTCT +
Preference number: 4 (lower is better)
Translates to: LSSEALFSLGGAHLTQPRSGRSG*TCPRGS
Trigger: AGACCCACGTGGGCATGTCCATCCAGACCTTCCGCT...CCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000472186.5
CDS-3UTR CCA 90 bp CAGCCAAGGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGCTTCAAGGCTGTGAGTaGGGTCACCTGAGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: QPRAASDWTEGVQDADMVLQGCE*GHLSRL
Trigger: AAGCCTGCTCAGGTGACCCCACTCACAGCCTTGAAG...CACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp CTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGGCTTCAAGGCTGTGAGTaGGGTCACCTGAGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: LLLTGQRASKMQTWCAGRLQGCE*GHLSRL
Trigger: AAGCCTGCTCAGGTGACCCCACTCACAGCCTTGAAG...CCTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp CTCTCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGCAGGGAGCCAGATCCTaGGAGGACGTTAACCACACC +
Preference number: 4 (lower is better)
Translates to: LSSEALFSLGGAHLTQPRQGARS*EDVNHT
Trigger: GGTGTGGTTAACGTCCTCCCAGGATCTGGCTCCCTG...CCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCTCCTTCACGCCATGCTaGCAGTACTCCATCAGCTTC +
Preference number: 4 (lower is better)
Translates to: GLLLTGQRASKMQTWCAGSFTPC*QYSISF
Trigger: GAAGCTGATGGAGTACTGCCAGCATGGCGTGAAGGA...GCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp TCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTCTCAAAGAAGAACCCTaGCCGAGGGACCTGATTCCC +
Preference number: 4 (lower is better)
Translates to: SEALFSLGGAHLTQPRAALKEEP*PRDLIP
Trigger: GGGAATCAGGTCCCTCGGCCAGGGTTCTTCTTTGAG...AGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGCTCAAAGAAGAACCCTaGCCGAGGGACCTGATTCCC +
Preference number: 4 (lower is better)
Translates to: AASDWTEGVQDADMVCRQLKEEP*PRDLIP
Trigger: GGGAATCAGGTCCCTCGGCCAGGGTTCTTCTTTGAG...CTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp CTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGGCAAATTCCGTGGCATTaGCCCGAGACAGCACGGCAT +
Preference number: 4 (lower is better)
Translates to: LLLTGQRASKMQTWCAGRQIPWH*PETARH
Trigger: ATGCCGTGCTGTCTCGGGCCAATGCCACGGAATTTG...CCTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GTGTCCCTGTCCAGCGGGTTGCCCACCTTCATCTTCCGCACCTCTTCTACCACTCAAATTCCGTGGCATTaGCCCGAGACAGCACGGCAT +
Preference number: 4 (lower is better)
Translates to: VSLSSGLPTFIFRTSSTTQIPWH*PETARH
Trigger: ATGCCGTGCTGTCTCGGGCCAATGCCACGGAATTTG...AGTGGTAGAAGAGGTGCGGAAGATGAAGGTGGGCAACCCGCTGGACAGGGACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp TTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCCAAATTCCGTGGCATTaGCCCGAGACAGCACGGCAT +
Preference number: 4 (lower is better)
Translates to: FRSFILPGRGTPHPAKGCQIPWH*PETARH
Trigger: ATGCCGTGCTGTCTCGGGCCAATGCCACGGAATTTG...GCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp AGTCTCTGGCCGACCAGGGAGCCAGATCCTGGGAGGACGTTAACCACACCTTTGTCCAAGATGCAGACATaGTGTGCAGGCAGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: SLWPTREPDPGRTLTTPLSKMQT*CAGRRA
Trigger: AGCCCTCCTGCCTGCACACCATGTCTGCATCTTGGA...CAAAGGTGTGGTTAACGTCCTCCCAGGATCTGGCTCCCTGGTCGGCCAGAGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp GAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTTCCAAGATGCAGACATaGTGTGCAGGCAGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: EALFSLGGAHLTQPRAASSKMQT*CAGRRA
Trigger: AGCCCTCCTGCCTGCACACCATGTCTGCATCTTGGA...AGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp TCCCTGGTGAAGACACCAGAAGCCAGGCCAAATTCCGTGGCATTGGCCCGAGACAGGGCTGCTTCTGACTaGACAGAGGGCGTCCAAGAT +
Preference number: 4 (lower is better)
Translates to: SLVKTPEARPNSVALARDRAASD*TEGVQD
Trigger: ATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCT...GTCTCGGGCCAATGCCACGGAATTTGGCCTGGCTTCTGGTGTCTTCACCAGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp TCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTAGGGCTGCTTCTGACTaGACAGAGGGCGTCCAAGAT +
Preference number: 4 (lower is better)
Translates to: SEALFSLGGAHLTQPRAARAASD*TEGVQD
Trigger: ATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCT...AGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTAAGCTTTATTCTCCCTaGGAGGGGCACACCTCACCC +
Preference number: 4 (lower is better)
Translates to: EALFSLGGAHLTQPRAASKLYSP*EGHTSP
Trigger: GGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTT...AGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp CTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGGAAGCTTTATTCTCCCTaGGAGGGGCACACCTCACCC +
Preference number: 4 (lower is better)
Translates to: LLLTGQRASKMQTWCAGRKLYSP*EGHTSP
Trigger: GGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTT...CCTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGAAGCTTTATTCTCCCTaGGAGGGGCACACCTCACCC +
Preference number: 4 (lower is better)
Translates to: AASDWTEGVQDADMVCRQKLYSP*EGHTSP
Trigger: GGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTT...CTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp TTCCCAAAGAGGATGAGTCCTGCTTTGGTGACCACCCCTGGCCGATGGGCTCCTCCAAGGACAGGAGCATaGGTGGCTTTGAGCAGGCAA +
Preference number: 4 (lower is better)
Translates to: FPKRMSPALVTTPGRWAPPRTGA*VALSRQ
Trigger: TTGCCTGCTCAAAGCCACCCATGCTCCTGTCCTTGG...AGGAGCCCATCGGCCAGGGGTGGTCACCAAAGCAGGACTCATCCTCTTTGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493803.5
3UTR CAA 72 bp GTGAAGACACCAGAAGCCAGGCCAAATTCCGTGGCATaGGCCCGAGACAGCACGGCATCCAAGTCCCCATCA +
Preference number: 4 (lower is better)
Translates to: VKTPEARPNSVA*ARDSTASKSPS
Trigger: TGATGGGGACTTGGATGCCGTGCTGTCTCGGGCCAATGCCACGGAATTTGGCCTGGCTTCTGGTGTCTTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR TCA 90 bp GCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGCCTTGTCTGGAACAGTaGACACACCCACCACTTCGT +
Preference number: 4 (lower is better)
Translates to: AASDWTEGVQDADMVCRQPCLEQ*THPPLR
Trigger: ACGAAGTGGTGGGTGTGTTCACTGTTCCAGACAAGG...CTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTCCTTGTCTGGAACAGTaGACACACCCACCACTTCGT +
Preference number: 4 (lower is better)
Translates to: EALFSLGGAHLTQPRAASPCLEQ*THPPLR
Trigger: ACGAAGTGGTGGGTGTGTTCACTGTTCCAGACAAGG...AGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp TCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGTGCCTAGGGAGCAGTaGCGGGTGATAGATGATGGA +
Preference number: 4 (lower is better)
Translates to: SSEALFSLGGAHLTQPRAVPREQ*RVIDDG
Trigger: TCCATCATCTATCACCCGTCACTGCTCCCTAGGCAC...AGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GGACTCCTCCTTGGCTATGAACATGTGGTCTTCCACGTCTGTGAAAACAGTTGGCCGCGGATCCAGTTGTaGATGGCCTCTGCCGGCTGG +
Preference number: 4 (lower is better)
Translates to: GLLLGYEHVVFHVCENSWPRIQL*MASAGW
Trigger: CCAGCCGGCAGAGGCCATTCACAACTGGATCCGCGG...CCAACTGTTTTCACAGACGTGGAAGACCACATGTTCATAGCCAAGGAGGAGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR TCA 90 bp GAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTACGCGGCCCCTGACTTaGAGAAATCAGTGGAGTCTT +
Preference number: 4 (lower is better)
Translates to: EALFSLGGAHLTQPRAASTRPLT*RNQWSL
Trigger: AAGACTCCACTGATTTCTTCAAGTCAGGGGCCGCGT...AGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp CTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGGACGCGGCCCCTGACTTaGAGAAATCAGTGGAGTCTT +
Preference number: 4 (lower is better)
Translates to: LLLTGQRASKMQTWCAGRTRPLT*RNQWSL
Trigger: AAGACTCCACTGATTTCTTCAAGTCAGGGGCCGCGT...CCTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGTTCCATCGGTGGGATTaGTGGTCTCAGAGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: AASDWTEGVQDADMVCRQFHRWD*WSQRSW
Trigger: CCAAGACCTCTGAGACCATCAATCCCACCGATGGAA...CTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTTTCCATCGGTGGGATTaGTGGTCTCAGAGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: EALFSLGGAHLTQPRAASFHRWD*WSQRSW
Trigger: CCAAGACCTCTGAGACCATCAATCCCACCGATGGAA...AGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GGCCCGAAGGACTCCTCCTTGGCTATGAACATGTGGTCTTCCACGTCTGTGAAACCTTGTCGACGTCGGTaGCTTGGGCCAGGGATACCT +
Preference number: 4 (lower is better)
Translates to: GPKDSSLAMNMWSSTSVKPCRRR*LGPGIP
Trigger: AGGTATCCCTGGCCCAAGTCACCGACGTCGACAAGG...TTTCACAGACGTGGAAGACCACATGTTCATAGCCAAGGAGGAGTCCTTCGGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR TCA 90 bp CTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGGCCTCTGTGGAGCCTGTaGACCCGATTTTCCTCACAT +
Preference number: 4 (lower is better)
Translates to: LLLTGQRASKMQTWCAGRPLWSL*TRFSSH
Trigger: ATGTGAGGAAAATCGGGTTCACAGGCTCCACAGAGG...CCTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp CTCTCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGAAAGATGATGAGGGGTaGCTTCCCGCCCAGTTCCAG +
Preference number: 4 (lower is better)
Translates to: LSSEALFSLGGAHLTQPRKDDEG*LPAQFQ
Trigger: CTGGAACTGGGCGGGAAGTCACCCCTCATCATCTTT...CCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp TCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTAAAGATGATGAGGGGTaGCTTCCCGCCCAGTTCCAG +
Preference number: 4 (lower is better)
Translates to: SSEALFSLGGAHLTQPRAKDDEG*LPAQFQ
Trigger: CTGGAACTGGGCGGGAAGTCACCCCTCATCATCTTT...AGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp CCATCAGCTTCACAAGGTGGGCATGGTGATTCTGCGGCCCGTGGTCGGTGTCCCTCTTGTTGTACGTGTTaGCAAACACAGTGCCTGCCT +
Preference number: 4 (lower is better)
Translates to: PSASQGGHGDSAARGRCPSCCTC*QTQCLP
Trigger: AGGCAGGCACTGTGTTTGTCAACACGTACAACAAGA...GGGACACCGACCACGGGCCGCAGAATCACCATGCCCACCTTGTGAAGCTGATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR TCA 90 bp GCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGCAAATCCAGACTGTTTaGATCCTCCGAAGGGAGCGG +
Preference number: 4 (lower is better)
Translates to: AASDWTEGVQDADMVCRQQIQTV*ILRRER
Trigger: CCGCTCCCTTCGGAGGATTCAAACAGTCTGGATTTG...CTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp CTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGGCAAAGCCTGTCCTTTTaGACGCCACCGGGAGTACTT +
Preference number: 4 (lower is better)
Translates to: LLLTGQRASKMQTWCAGRQSLSF*TPPGVL
Trigger: AAGTACTCCCGGTGGCGTGCAAAAGGACAGGCTTTG...CCTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp GCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGCAAAGCCTGTCCTTTTaGACGCCACCGGGAGTACTT +
Preference number: 4 (lower is better)
Translates to: AASDWTEGVQDADMVCRQQSLSF*TPPGVL
Trigger: AAGTACTCCCGGTGGCGTGCAAAAGGACAGGCTTTG...CTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp GAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTCAAAGCCTGTCCTTTTaGACGCCACCGGGAGTACTT +
Preference number: 4 (lower is better)
Translates to: EALFSLGGAHLTQPRAASQSLSF*TPPGVL
Trigger: AAGTACTCCCGGTGGCGTGCAAAAGGACAGGCTTTG...AGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp TCCGCACCTCTTCTACCACTCTCCGCACGAACTCATCATGAATGGAGTCCTCCAAGCGGTTGTACAGCGTaGTCACGGTGTCGTCCGGGA +
Preference number: 4 (lower is better)
Translates to: SAPLLPLSARTHHEWSPPSGCTA*SRCRPG
Trigger: TCCCGGACGACACCGTGAGCACGCTGTACAACCGCT...TGGAGGACTCCATTCATGATGAGTTCGTGCGGAGAGTGGTAGAAGAGGTGCGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR GCA 90 bp TTGTCATCATTCCCAAAGAGGATGAGTCCTGCTTTGGTGACCACCCCTGGCCGAAGCGGTTGTACAGCGTaGTCACGGTGTCGTCCGGGA +
Preference number: 4 (lower is better)
Translates to: LSSFPKRMSPALVTTPGRSGCTA*SRCRPG
Trigger: TCCCGGACGACACCGTGAGCACGCTGTACAACCGCT...TCGGCCAGGGGTGGTCACCAAAGCAGGACTCATCCTCTTTGGGAATGATGACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000493803.5
CDS-3UTR GCA 90 bp AATGGCCTCTGCCGGCTGGTCCCAGTTGATCTTGGCTGTCTCCTTCTTCTGAATGGAGTCTGGGGGCTTTaGCCTCAGCGATCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: NGLCRLVPVDLGCLLLLNGVWGL*PQRSAS
Trigger: TGAGGCTGATCGCTGAGGGCAAAGCCCCCAGACTCC...ATTCAGAAGAAGGAGACAGCCAAGATCAACTGGGACCAGCCGGCAGAGGCCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000493803.5
CDS-3UTR GCA 90 bp CTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGGAAAGAGGATGAGTCCTaGTTTGGTGACCACCCCTGG +
Preference number: 4 (lower is better)
Translates to: LLLTGQRASKMQTWCAGRKEDES*FGDHPW
Trigger: CCAGGGGTGGTCACCAAAGCAGGACTCATCCTCTTT...CCTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp CGATTTTCCTCACATCAGGATGGTCTGAGAGTCTCTGGCCGACCAGGGAGCCAGCCACGTAGTCAATGCTaGACTCGCCCTCCTCATCGT +
Preference number: 4 (lower is better)
Translates to: RFSSHQDGLRVSGRPGSQPRSQC*TRPPHR
Trigger: ACGATGAGGAGGGCGAGTGCAGCATTGACTACGTGG...CTGGCTCCCTGGTCGGCCAGAGACTCTCAGACCATCCTGATGTGAGGAAAATCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR GCA 90 bp TTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGACTGGTTTCCACGTAGTCAATaGTGCACTCGCCCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: LFSLGGAHLTQPRAASDWFPRSQ*CTRPPH
Trigger: ATGAGGAGGGCGAGTGCAGCATTGACTACGTGGAAA...CCAGTCAGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp GGTGACTTGGGCCAGGGATACCTGGCAGATGACACTTCCATCGGTGGGATTGATAGAGCTGGTGGGGCATaGGGACAGTGCGCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: GDLGQGYLADDTSIGGIDRAGGA*GQCACS
Trigger: TGAACAAGCGCACTGTCCGCATGCCCCACCAGCTCT...ATCAATCCCACCGATGGAAGTGTCATCTGCCAGGTATCCCTGGCCCAAGTCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR GCA 90 bp GCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGCTGCTCCATGAGATCTaGCAACCTGTACATCAGCCG +
Preference number: 4 (lower is better)
Translates to: AASDWTEGVQDADMVCRQLLHEI*QPVHQP
Trigger: CGGCTGATGTACAGGTTGGCAGATCTCATGGAGCAG...CTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000472186.5
CDS-3UTR GCA 90 bp TCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTCTGCTCCATGAGATCTaGCAACCTGTACATCAGCCG +
Preference number: 4 (lower is better)
Translates to: SEALFSLGGAHLTQPRAALLHEI*QPVHQP
Trigger: CGGCTGATGTACAGGTTGGCAGATCTCATGGAGCAG...AGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000472186.5
CDS-3UTR GCA 90 bp TTCCACGTCTGTGAAAACAGTTGGCTCAAAGAAGAACCCTGGCCGAGGGACCTGCCCTGTCCAGCGGGTTaGCCACCTTCATCTTCCGCA +
Preference number: 4 (lower is better)
Translates to: FHVCENSWLKEEPWPRDLPCPAG*PPSSSA
Trigger: TGCGGAAGATGAAGGTGGGCAACCCGCTGGACAGGG...CAGGTCCCTCGGCCAGGGTTCTTCTTTGAGCCAACTGTTTTCACAGACGTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR GCA 90 bp GTGTCCCTGTCCAGCGGGTTGCCCACCTTCATCTTCCGCACCTCTTCTACCACTGACAAACACAGTGCCTaGCTGGAGCTTGTCACTGAC +
Preference number: 4 (lower is better)
Translates to: VSLSSGLPTFIFRTSSTTDKHSA*LELVTD
Trigger: GTCAGTGACAAGCTCCAGGCAGGCACTGTGTTTGTC...AGTGGTAGAAGAGGTGCGGAAGATGAAGGTGGGCAACCCGCTGGACAGGGACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR GCA 90 bp CTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGGGACAAACACAGTGCCTaGCTGGAGCTTGTCACTGAC +
Preference number: 4 (lower is better)
Translates to: LLLTGQRASKMQTWCAGRDKHSA*LELVTD
Trigger: GTCAGTGACAAGCTCCAGGCAGGCACTGTGTTTGTC...CCTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp TCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTGACAAACACAGTGCCTaGCTGGAGCTTGTCACTGAC +
Preference number: 4 (lower is better)
Translates to: SEALFSLGGAHLTQPRAADKHSA*LELVTD
Trigger: GTCAGTGACAAGCTCCAGGCAGGCACTGTGTTTGTC...AGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp TCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTCCCCTTTTCATGATGTaGTTGCCCACCTCTGTGGAG +
Preference number: 4 (lower is better)
Translates to: SEALFSLGGAHLTQPRAAPLFMM*LPTSVE
Trigger: CTCCACAGAGGTGGGCAAGCACATCATGAAAAGGGG...AGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393431.6
CDS-3UTR GCA 90 bp TCCGTGGCATTGGCCCGAGACAGCACGGCATCCAAGTCCCCATCAGCAAACCGAGGGCGGGTCTATAAATaGCATGTAAAAGCCAACCCC +
Preference number: 4 (lower is better)
Translates to: SVALARDSTASKSPSANRGRVYK*HVKANP
Trigger: GGGGTTGGCTTTTACATGGCATTTATAGACCCGCCC...TCGGTTTGCTGATGGGGACTTGGATGCCGTGCTGTCTCGGGCCAATGCCACGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455064.6
CDS-3UTR CCA 90 bp GAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTTCGGCCCCCAAAGCCTaGTATTTTGCCACCACATCA +
Preference number: 4 (lower is better)
Translates to: EALFSLGGAHLTQPRAASSAPKA*YFATTS
Trigger: TGATGTGGTGGCAAAATACCAGGCTTTGGGGGCCGA...AGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp TCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCGGCCCCCAAAGCCTaGTATTTTGCCACCACATCA +
Preference number: 4 (lower is better)
Translates to: SEALFSLGGAHLTQPRAASAPKA*YFATTS
Trigger: TGATGTGGTGGCAAAATACCAGGCTTTGGGGGCCGA...AGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp CAGCCAAGGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTCGGCCCCCAAAGCCTaGTATTTTGCCACCACATCA +
Preference number: 4 (lower is better)
Translates to: QPRAASDWTEGVQDADMVSAPKA*YFATTS
Trigger: TGATGTGGTGGCAAAATACCAGGCTTTGGGGGCCGA...CACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp CTCTCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGAATCCCCTCATAGGTaGCTCCTTCCTCAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: LSSEALFSLGGAHLTQPRESPHR*LLPQAE
Trigger: CTCAGCCTGAGGAAGGAGCCACCTATGAGGGGATTC...CCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GGCCCGAAGGACTCCTCCTTGGCTATGAACATGTGGTCTTCCACGTCTGTGAAAGGATCCAGTTGTGAATaGCCTCTGCCGGCTGGTCCC +
Preference number: 4 (lower is better)
Translates to: GPKDSSLAMNMWSSTSVKGSSCE*PLPAGP
Trigger: GGGACCAGCCGGCAGAGGCCATTCACAACTGGATCC...TTTCACAGACGTGGAAGACCACATGTTCATAGCCAAGGAGGAGTCCTTCGGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp CCTGCAGTCGCTGTCCCCAATAACTTTGGGCTCTCTGCCTTCCACTCTTCAATATGGCCGATGGGCTCCTaGGATGGGCAAAGCGTCTCC +
Preference number: 4 (lower is better)
Translates to: PAVAVPNNFGLSAFHSSIWPMGS*DGQSVS
Trigger: GGAGACGCTTTGCCCATCCCAGGAGCCCATCGGCCA...TATTGAAGAGTGGAAGGCAGAGAGCCCAAAGTTATTGGGGACAGCGACTGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR CCA 90 bp ACAAACACAGTGCCTGCCTGGAGCTTGTCACTGACATACAGGGCCTTGTTGATGACCACCCCTGGCCGATaGGCTCCTGGGATGGGCAAA +
Preference number: 4 (lower is better)
Translates to: TNTVPAWSLSLTYRALLMTTPGR*APGMGK
Trigger: TTTGCCCATCCCAGGAGCCCATCGGCCAGGGGTGGT...CATCAACAAGGCCCTGTATGTCAGTGACAAGCTCCAGGCAGGCACTGTGTTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp TCCGCACCTCTTCTACCACTCTCCGCACGAACTCATCATGAATGGAGTCCTCCATTTGGTGACCACCCCTaGCCGATGGGCTCCTGGGAT +
Preference number: 4 (lower is better)
Translates to: SAPLLPLSARTHHEWSPPFGDHP*PMGSWD
Trigger: ATCCCAGGAGCCCATCGGCCAGGGGTGGTCACCAAA...TGGAGGACTCCATTCATGATGAGTTCGTGCGGAGAGTGGTAGAAGAGGTGCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp CTCTCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGCAACCTCCAGGACTTTaGGGAGGATCCGCTGCCAAA +
Preference number: 4 (lower is better)
Translates to: LSSEALFSLGGAHLTQPRQPPGL*GGSAAK
Trigger: TTTGGCAGCGGATCCTCCCCAAAGTCCTGGAGGTTG...CCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp CCTTCTCAGCTTCCAGACAGTGGCAGCTGCTTCCTGCAGTCGCTGTCCCCAATACAACCTCCAGGACTTTaGGGAGGATCCGCTGCCAAA +
Preference number: 4 (lower is better)
Translates to: PSQLPDSGSCFLQSLSPIQPPGL*GGSAAK
Trigger: TTTGGCAGCGGATCCTCCCCAAAGTCCTGGAGGTTG...TATTGGGGACAGCGACTGCAGGAAGCAGCTGCCACTGTCTGGAAGCTGAGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR CCA 90 bp GTCTTCCACGTCTGTGAAAACAGTTGGCTCAAAGAAGAACCCTGGCCGAGGGACCCAATGAAGAGCTGGTaGGGCATGCGGACAGTGCGC +
Preference number: 4 (lower is better)
Translates to: VFHVCENSWLKEEPWPRDPMKSW*GMRTVR
Trigger: GCGCACTGTCCGCATGCCCCACCAGCTCTTCATTGG...GTCCCTCGGCCAGGGTTCTTCTTTGAGCCAACTGTTTTCACAGACGTGGAAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp CGTGTTGACAAACACAGTGCCTGCCTGGAGCTTGTCACTGACATACAGGGCCTTTCGACGTCGGTGACTTaGGCCAGGGATACCTGGCAG +
Preference number: 4 (lower is better)
Translates to: RVDKHSACLELVTDIQGLSTSVT*ARDTWQ
Trigger: CTGCCAGGTATCCCTGGCCCAAGTCACCGACGTCGA...AAGGCCCTGTATGTCAGTGACAAGCTCCAGGCAGGCACTGTGTTTGTCAACACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp TTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTCCTTCACGCCATGCTaGCAGTACTCCATCAGCTTC +
Preference number: 4 (lower is better)
Translates to: FRSFILPGRGTPHPAKGCSFTPC*QYSISF
Trigger: GAAGCTGATGGAGTACTGCCAGCATGGCGTGAAGGA...GCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GGGGTGACTTCCCGCCCAGTTCCAGGGACACCTTCTTCACGTTACTTATGGCACCTCAAAGAAGAACCCTaGCCGAGGGACCTGATTCCC +
Preference number: 4 (lower is better)
Translates to: GVTSRPVPGTPSSRYLWHLKEEP*PRDLIP
Trigger: GGGAATCAGGTCCCTCGGCCAGGGTTCTTCTTTGAG...GTGCCATAAGTAACGTGAAGAAGGTGTCCCTGGAACTGGGCGGGAAGTCACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455064.6
CDS-3UTR CCA 90 bp TCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTCAAATTCCGTGGCATTaGCCCGAGACAGCACGGCAT +
Preference number: 4 (lower is better)
Translates to: SSEALFSLGGAHLTQPRAQIPWH*PETARH
Trigger: ATGCCGTGCTGTCTCGGGCCAATGCCACGGAATTTG...AGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp TTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGACTGGAACACAGTGCCTGCCTaGAGCTTGTCACTGACATAC +
Preference number: 4 (lower is better)
Translates to: LFSLGGAHLTQPRAASDWNTVPA*SLSLTY
Trigger: GTATGTCAGTGACAAGCTCCAGGCAGGCACTGTGTT...CCAGTCAGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp TCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTAGGGCTGCTTCTGACTaGACAGAGGGCGTCCAAGAT +
Preference number: 4 (lower is better)
Translates to: SSEALFSLGGAHLTQPRARAASD*TEGVQD
Trigger: ATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCT...AGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp CTCTCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGAAGCTTTATTCTCCCTaGGAGGGGCACACCTCACCC +
Preference number: 4 (lower is better)
Translates to: LSSEALFSLGGAHLTQPRKLYSP*EGHTSP
Trigger: GGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTT...CCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
3UTR CAA 72 bp TTGAATCCTCCGAAGGGAGCGGCCACGTCGGTCTTGTaGTACGTGTTGACAAACACAGTGCCTGCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: LNPPKGAATSVL*YVLTNTVPAWS
Trigger: GCTCCAGGCAGGCACTGTGTTTGTCAACACGTACAACAAGACCGACGTGGCCGCTCCCTTCGGAGGATTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR TCA 90 bp CTCTCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGCCTTGTCTGGAACAGTaGACACACCCACCACTTCGT +
Preference number: 4 (lower is better)
Translates to: LSSEALFSLGGAHLTQPRPCLEQ*THPPLR
Trigger: ACGAAGTGGTGGGTGTGTTCACTGTTCCAGACAAGG...CCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp CAGCCAAGGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTTATCTCCATGGGGATaGATTGGCTGCAGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: QPRAASDWTEGVQDADMVLSPWG*IGCRRA
Trigger: TGCCCTTCTGCAGCCAATTCATCCCCATGGAGATAA...CACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp TCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTTATCTCCATGGGGATaGATTGGCTGCAGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: SEALFSLGGAHLTQPRAALSPWG*IGCRRA
Trigger: TGCCCTTCTGCAGCCAATTCATCCCCATGGAGATAA...AGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp TTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTATCTCCATGGGGATaGATTGGCTGCAGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: FRSFILPGRGTPHPAKGCLSPWG*IGCRRA
Trigger: TGCCCTTCTGCAGCCAATTCATCCCCATGGAGATAA...GCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp CGGTGTCCCTGTCCAGCGGGTTGCCCACCTTCATCTTCCGCACCTCTTCTACCACCTTTCTTATCTCCGTaGATGAGGGTCCAGTTGATG +
Preference number: 4 (lower is better)
Translates to: RCPCPAGCPPSSSAPLLPPFLSP*MRVQLM
Trigger: CATCAACTGGACCCTCATTCACGGAGATAAGAAAGG...TGGTAGAAGAGGTGCGGAAGATGAAGGTGGGCAACCCGCTGGACAGGGACACCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR TCA 90 bp TTCCACGTCTGTGAAAACAGTTGGCTCAAAGAAGAACCCTGGCCGAGGGACCTGCCGGCTGGTCCCAGTTaGTCTTGGCTGTCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: FHVCENSWLKEEPWPRDLPAGPS*SWLSPS
Trigger: AGAAGGAGACAGCCAAGATCAACTGGGACCAGCCGG...CAGGTCCCTCGGCCAGGGTTCTTCTTTGAGCCAACTGTTTTCACAGACGTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR TCA 90 bp CTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGGTTGCCATCCTCCAGCTaGATATTCTTCACCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LLLTGQRASKMQTWCAGRLPSSS*IFFTSS
Trigger: GCTGCTGGTGAAGAATATTCAGCTGGAGGATGGCAA...CCTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp TCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTTGCCATCCTCCAGCTaGATATTCTTCACCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SEALFSLGGAHLTQPRAALPSSS*IFFTSS
Trigger: GCTGCTGGTGAAGAATATTCAGCTGGAGGATGGCAA...AGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp TTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTCACTAACAGCTGGATaGAGTCCCCAAAGGTGGATG +
Preference number: 4 (lower is better)
Translates to: FRSFILPGRGTPHPAKGCSLTAG*SPQRWM
Trigger: CATCCACCTTTGGGGACTTCATCCAGCTGTTAGTGA...GCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTTCACTAACAGCTGGATaGAGTCCCCAAAGGTGGATG +
Preference number: 4 (lower is better)
Translates to: EALFSLGGAHLTQPRAASSLTAG*SPQRWM
Trigger: CATCCACCTTTGGGGACTTCATCCAGCTGTTAGTGA...AGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp CTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGGTCACTAACAGCTGGATaGAGTCCCCAAAGGTGGATG +
Preference number: 4 (lower is better)
Translates to: LLLTGQRASKMQTWCAGRSLTAG*SPQRWM
Trigger: CATCCACCTTTGGGGACTTCATCCAGCTGTTAGTGA...CCTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp TCCATTCTCAAAGGCATCCTTGGCTGCGGCCACTGCCTTGTCGACGTCGGTGACTCACTAACAGCTGGATaGAGTCCCCAAAGGTGGATG +
Preference number: 4 (lower is better)
Translates to: SILKGILGCGHCLVDVGDSLTAG*SPQRWM
Trigger: CATCCACCTTTGGGGACTTCATCCAGCTGTTAGTGA...GTCACCGACGTCGACAAGGCAGTGGCCGCAGCCAAGGATGCCTTTGAGAATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR TCA 90 bp TCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTTTCCATCGGTGGGATTaGTGGTCTCAGAGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: SSEALFSLGGAHLTQPRAFHRWD*WSQRSW
Trigger: CCAAGACCTCTGAGACCATCAATCCCACCGATGGAA...AGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp CTCTCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGTTCCATCGGTGGGATTaGTGGTCTCAGAGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: LSSEALFSLGGAHLTQPRFHRWD*WSQRSW
Trigger: CCAAGACCTCTGAGACCATCAATCCCACCGATGGAA...CCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp CCTAGATCTTTGCCAAATCCAGACTGTTTGAATCCTCCGAAGGGAGCGGCCACGGTGAGTGGGGTCACCTaGGCAGGCTTGATCACCACT +
Preference number: 4 (lower is better)
Translates to: PRSLPNPDCLNPPKGAATVSGVT*AGLITT
Trigger: AGTGGTGATCAAGCCTGCTCAGGTGACCCCACTCAC...CGTGGCCGCTCCCTTCGGAGGATTCAAACAGTCTGGATTTGGCAAAGATCTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR TCA 90 bp ATGCCGGCCTTTAATGTCAGCTCTGCAAACTTCAAGGCTGTGAGTGGGGTCACCGTGAGTGGGGTCACCTaGGCAGGCTTGATCACCACT +
Preference number: 4 (lower is better)
Translates to: MPAFNVSSANFKAVSGVTVSGVT*AGLITT
Trigger: AGTGGTGATCAAGCCTGCTCAGGTGACCCCACTCAC...GGTGACCCCACTCACAGCCTTGAAGTTTGCAGAGCTGACATTAAAGGCCGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR TCA 90 bp TTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGACTGGGGTCTTCCACGTCTGTaGAAACAGTTGGCTCAAAGA +
Preference number: 4 (lower is better)
Translates to: LFSLGGAHLTQPRAASDWGLPRL*KQLAQR
Trigger: TCTTTGAGCCAACTGTTTTCACAGACGTGGAAGACC...CCAGTCAGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCGGTCTTCCACGTCTGTaGAAACAGTTGGCTCAAAGA +
Preference number: 4 (lower is better)
Translates to: GLLLTGQRASKMQTWCAGGLPRL*KQLAQR
Trigger: TCTTTGAGCCAACTGTTTTCACAGACGTGGAAGACC...GCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GTGTCCCTGTCCAGCGGGTTGCCCACCTTCATCTTCCGCACCTCTTCTACCACTACTCCTCCTTGGCTATaGACATGTGGTCTTCCACGT +
Preference number: 4 (lower is better)
Translates to: VSLSSGLPTFIFRTSSTTTPPWL*TCGLPR
Trigger: ACGTGGAAGACCACATGTTCATAGCCAAGGAGGAGT...AGTGGTAGAAGAGGTGCGGAAGATGAAGGTGGGCAACCCGCTGGACAGGGACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR TCA 90 bp GAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTACTCCTCCTTGGCTATaGACATGTGGTCTTCCACGT +
Preference number: 4 (lower is better)
Translates to: EALFSLGGAHLTQPRAASTPPWL*TCGLPR
Trigger: ACGTGGAAGACCACATGTTCATAGCCAAGGAGGAGT...AGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGACTCCTCCTTGGCTATaGACATGTGGTCTTCCACGT +
Preference number: 4 (lower is better)
Translates to: AASDWTEGVQDADMVCRQTPPWL*TCGLPR
Trigger: ACGTGGAAGACCACATGTTCATAGCCAAGGAGGAGT...CTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp TTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGACTGGTCTTGTTGTACGTGTTaGCAAACACAGTGCCTGCCT +
Preference number: 4 (lower is better)
Translates to: LFSLGGAHLTQPRAASDWSCCTC*QTQCLP
Trigger: AGGCAGGCACTGTGTTTGTCAACACGTACAACAAGA...CCAGTCAGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp TCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTCAAATCCAGACTGTTTaGATCCTCCGAAGGGAGCGG +
Preference number: 4 (lower is better)
Translates to: SSEALFSLGGAHLTQPRAQIQTV*ILRRER
Trigger: CCGCTCCCTTCGGAGGATTCAAACAGTCTGGATTTG...AGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GGCCCGAAGGACTCCTCCTTGGCTATGAACATGTGGTCTTCCACGTCTGTGAAACAGGTTAGACTTCTGTaGGCCGCAGCCCCGAAACTG +
Preference number: 4 (lower is better)
Translates to: GPKDSSLAMNMWSSTSVKQVRLL*AAAPKL
Trigger: CAGTTTCGGGGCTGCGGCTCACAGAAGTCTAACCTG...TTTCACAGACGTGGAAGACCACATGTTCATAGCCAAGGAGGAGTCCTTCGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR TCA 90 bp TTGTCATCATTCCCAAAGAGGATGAGTCCTGCTTTGGTGACCACCCCTGGCCGACAGGTTAGACTTCTGTaGGCCGCAGCCCCGAAACTG +
Preference number: 4 (lower is better)
Translates to: LSSFPKRMSPALVTTPGRQVRLL*AAAPKL
Trigger: CAGTTTCGGGGCTGCGGCTCACAGAAGTCTAACCTG...TCGGCCAGGGGTGGTCACCAAAGCAGGACTCATCCTCTTTGGGAATGATGACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493803.5
CDS-3UTR GCA 90 bp TTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGACTGGGCTCTGTCCAATCACTaGAATCTTCATGGTAGCAGG +
Preference number: 4 (lower is better)
Translates to: LFSLGGAHLTQPRAASDWALSNH*NLHGSR
Trigger: CCTGCTACCATGAAGATTGCAGTGATTGGACAGAGC...CCAGTCAGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp GACGTCGGTGACTTGGGCCAGGGATACCTGGCAGATGACACTTCCATCGGTGGGCAAAGCCTGGTATTTTaGCACCACATCAGGCAAAGC +
Preference number: 4 (lower is better)
Translates to: DVGDLGQGYLADDTSIGGQSLVF*HHIRQS
Trigger: GCTTTGCCTGATGTGGTGGCAAAATACCAGGCTTTG...CCCACCGATGGAAGTGTCATCTGCCAGGTATCCCTGGCCCAAGTCACCGACGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR GCA 90 bp TCCGCACCTCTTCTACCACTCTCCGCACGAACTCATCATGAATGGAGTCCTCCAACCTCACACTCCTTCTaGAGCAGCAGGTCTCCGGTG +
Preference number: 4 (lower is better)
Translates to: SAPLLPLSARTHHEWSPPTSHSF*SSRSPV
Trigger: CACCGGAGACCTGCTGCTGCAGAAGGAGTGTGAGGT...TGGAGGACTCCATTCATGATGAGTTCGTGCGGAGAGTGGTAGAAGAGGTGCGGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR GCA 90 bp GTATTTTGCCACCACATCAGGCAAAGCCTGTCCTTTTGCACGCCACCGGGAGTAACCTCACACTCCTTCTaGAGCAGCAGGTCTCCGGTG +
Preference number: 4 (lower is better)
Translates to: VFCHHIRQSLSFCTPPGVTSHSF*SSRSPV
Trigger: CACCGGAGACCTGCTGCTGCAGAAGGAGTGTGAGGT...TACTCCCGGTGGCGTGCAAAAGGACAGGCTTTGCCTGATGTGGTGGCAAAATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR GCA 90 bp CACGGCATCCAAGTCCCCATCAGCAAACCGAGAGATGATCATGACAGGCCCGAAGTTGTGAATGGCCTCTaGCGGCTGGTCCCAGTTGAT +
Preference number: 4 (lower is better)
Translates to: HGIQVPISKPRDDHDRPEVVNGL*RLVPVD
Trigger: ATCAACTGGGACCAGCCGGCAGAGGCCATTCACAAC...TTCGGGCCTGTCATGATCATCTCTCGGTTTGCTGATGGGGACTTGGATGCCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR GCA 90 bp TTTGATGCCTTCAGGGAAGAGGAAGCGGTTGTACAGCGTGCTCACGGTGTCGTCGTTGTGAATGGCCTCTaGCGGCTGGTCCCAGTTGAT +
Preference number: 4 (lower is better)
Translates to: FDAFREEEAVVQRAHGVVVVNGL*RLVPVD
Trigger: ATCAACTGGGACCAGCCGGCAGAGGCCATTCACAAC...GACGACACCGTGAGCACGCTGTACAACCGCTTCCTCTTCCCTGAAGGCATCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR GCA 90 bp CTCTCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGAAAGAGGATGAGTCCTaGTTTGGTGACCACCCCTGG +
Preference number: 4 (lower is better)
Translates to: LSSEALFSLGGAHLTQPRKEDES*FGDHPW
Trigger: CCAGGGGTGGTCACCAAAGCAGGACTCATCCTCTTT...CCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp TCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTAAAGAGGATGAGTCCTaGTTTGGTGACCACCCCTGG +
Preference number: 4 (lower is better)
Translates to: SSEALFSLGGAHLTQPRAKEDES*FGDHPW
Trigger: CCAGGGGTGGTCACCAAAGCAGGACTCATCCTCTTT...AGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp GAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTAAGGACACTGCTGGCTaGCCCCTTAAAGAAGTTCGA +
Preference number: 4 (lower is better)
Translates to: EALFSLGGAHLTQPRAASKDTAG*PLKEVR
Trigger: TCGAACTTCTTTAAGGGGGCAGCCAGCAGTGTCCTT...AGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp CAGCCAAGGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGAAGGACACTGCTGGCTaGCCCCTTAAAGAAGTTCGA +
Preference number: 4 (lower is better)
Translates to: QPRAASDWTEGVQDADMVKDTAG*PLKEVR
Trigger: TCGAACTTCTTTAAGGGGGCAGCCAGCAGTGTCCTT...CACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp CTGATGGTGGCAGTGGCTGGCAGGTACATGTTGGGCTCCCACCTGTACATCAGCAAGGACACTGCTGGCTaGCCCCTTAAAGAAGTTCGA +
Preference number: 4 (lower is better)
Translates to: LMVAVAGRYMLGSHLYISKDTAG*PLKEVR
Trigger: TCGAACTTCTTTAAGGGGGCAGCCAGCAGTGTCCTT...GCTGATGTACAGGTGGGAGCCCAACATGTACCTGCCAGCCACTGCCACCATCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR GCA 90 bp GTTGCCCACCTTCATCTTCCGCACCTCTTCTACCACTCTCCGCACGAACTCATCCGCAGTAACCAGCTCTaGCTCTGTCAGCTCAAGGAC +
Preference number: 4 (lower is better)
Translates to: VAHLHLPHLFYHSPHELIRSNQL*LCQLKD
Trigger: GTCCTTGAGCTGACAGAGGCAGAGCTGGTTACTGCG...GATGAGTTCGTGCGGAGAGTGGTAGAAGAGGTGCGGAAGATGAAGGTGGGCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR GCA 90 bp GGTTGCCCACCTTCATCTTCCGCACCTCTTCTACCACTCTCCGCACGAACTCATCGCAGTAACCAGCTCTaGCTCTGTCAGCTCAAGGAC +
Preference number: 4 (lower is better)
Translates to: GCPPSSSAPLLPLSARTHRSNQL*LCQLKD
Trigger: GTCCTTGAGCTGACAGAGGCAGAGCTGGTTACTGCG...ATGAGTTCGTGCGGAGAGTGGTAGAAGAGGTGCGGAAGATGAAGGTGGGCAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR GCA 90 bp CTTGAATACCGGCACTCCATCCTTCTCAGCTTCCAGACAGTGGCAGCTGCTTCCCCACGTAGTCAATGCTaGACTCGCCCTCCTCATCGT +
Preference number: 4 (lower is better)
Translates to: LEYRHSILLSFQTVAAASPRSQC*TRPPHR
Trigger: ACGATGAGGAGGGCGAGTGCAGCATTGACTACGTGG...GGAAGCAGCTGCCACTGTCTGGAAGCTGAGAAGGATGGAGTGCCGGTATTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR GCA 90 bp GCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGTTTCCACGTAGTCAATaGTGCACTCGCCCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: AASDWTEGVQDADMVCRQFPRSQ*CTRPPH
Trigger: ATGAGGAGGGCGAGTGCAGCATTGACTACGTGGAAA...CTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp CCATCAGCTTCACAAGGTGGGCATGGTGATTCTGCGGCCCGTGGTCGGTGTCCCAGTGCGCTTGTTCACTaGCATTTCCACGTAGTCAAT +
Preference number: 4 (lower is better)
Translates to: PSASQGGHGDSAARGRCPSALVH*HFHVVN
Trigger: ATTGACTACGTGGAAATGGCAGTGAACAAGCGCACT...GGGACACCGACCACGGGCCGCAGAATCACCATGCCCACCTTGTGAAGCTGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR GCA 90 bp TTCCACGTCTGTGAAAACAGTTGGCTCAAAGAAGAACCCTGGCCGAGGGACCTGAGAGCTGGTGGGGCATaGGGACAGTGCGCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: FHVCENSWLKEEPWPRDLRAGGA*GQCACS
Trigger: TGAACAAGCGCACTGTCCGCATGCCCCACCAGCTCT...CAGGTCCCTCGGCCAGGGTTCTTCTTTGAGCCAACTGTTTTCACAGACGTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR GCA 90 bp CAGCCAAGGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGCCACACCTTTGGGAATaGCGGCCTTTAATGTCAGCT +
Preference number: 4 (lower is better)
Translates to: QPRAASDWTEGVQDADMVPHLWE*RPLMSA
Trigger: AGCTGACATTAAAGGCCGGCATTCCCAAAGGTGTGG...CACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp TTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCCAGCTTTTCATGATGTaGTTGCCCACCTCTGTGGAG +
Preference number: 4 (lower is better)
Translates to: FRSFILPGRGTPHPAKGCQLFMM*LPTSVE
Trigger: CTCCACAGAGGTGGGCAAGCACATCATGAAAAGCTG...GCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp CAGCCAAGGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGCAGCTTTTCATGATGTaGTTGCCCACCTCTGTGGAG +
Preference number: 4 (lower is better)
Translates to: QPRAASDWTEGVQDADMVQLFMM*LPTSVE
Trigger: CTCCACAGAGGTGGGCAAGCACATCATGAAAAGCTG...CACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp CTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGGCAGCTTTTCATGATGTaGTTGCCCACCTCTGTGGAG +
Preference number: 4 (lower is better)
Translates to: LLLTGQRASKMQTWCAGRQLFMM*LPTSVE
Trigger: CTCCACAGAGGTGGGCAAGCACATCATGAAAAGCTG...CCTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp TCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTGAACTCATCCCCATCTaGACAGCCTTGTTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: SEALFSLGGAHLTQPRAAELIPI*TALLRS
Trigger: TGACCTCAACAAGGCTGTGCAGATGGGGATGAGTTC...AGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp CTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGGCACAAAGAGTCGGCCTaGTGCAATGCAATTCTCTCC +
Preference number: 4 (lower is better)
Translates to: LLLTGQRASKMQTWCAGRHKESA*CNAILS
Trigger: GGAGAGAATTGCATTGCAGCAGGCCGACTCTTTGTG...CCTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp TTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCCACAAAGAGTCGGCCTaGTGCAATGCAATTCTCTCC +
Preference number: 4 (lower is better)
Translates to: FRSFILPGRGTPHPAKGCHKESA*CNAILS
Trigger: GGAGAGAATTGCATTGCAGCAGGCCGACTCTTTGTG...GCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp AGGCCTGAAGTGTTCAGCGTTGAGTTGAAAAATGTCAGTTTCTGTTCACAGGCCGCCTCGGACACCCTGTaGTCAGGACCAGCCGGGTGG +
Preference number: 4 (lower is better)
Translates to: RPEVFSVELKNVSFCSQAASDTL*SGPAGW
Trigger: CCACCCGGCTGGTCCTGAGCACAGGGTGTCCGAGGC...GGCCTGTGAACAGAAACTGACATTTTTCAACTCAACGCTGAACACTTCAGGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493803.5
CDS-3UTR CCA 90 bp TCCGCACCTCTTCTACCACTCTCCGCACGAACTCATCATGAATGGAGTCCTCCAATGGCCTCTGCCGGCTaGTCCCAGTTGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: SAPLLPLSARTHHEWSPPMASAG*SQLILA
Trigger: AGCCAAGATCAACTGGGACCAGCCGGCAGAGGCCAT...TGGAGGACTCCATTCATGATGAGTTCGTGCGGAGAGTGGTAGAAGAGGTGCGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp GTTGCCCACCTTCATCTTCCGCACCTCTTCTACCACTCTCCGCACGAACTCATCCAACCTCCAGGACTTTaGGGAGGATCCGCTGCCAAA +
Preference number: 4 (lower is better)
Translates to: VAHLHLPHLFYHSPHELIQPPGL*GGSAAK
Trigger: TTTGGCAGCGGATCCTCCCCAAAGTCCTGGAGGTTG...GATGAGTTCGTGCGGAGAGTGGTAGAAGAGGTGCGGAAGATGAAGGTGGGCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp GGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCTTCCTCACTAACAGCTaGATGAAGTCCCCAAAGGTG +
Preference number: 4 (lower is better)
Translates to: GLLLTGQRASKMQTWCAGFLTNS*MKSPKV
Trigger: CACCTTTGGGGACTTCATCCAGCTGTTAGTGAGGAA...GCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GTTGACAAACACAGTGCCTGCCTGGAGCTTGTCACTGACATACAGGGCCTTGTTTGGTCTCAGAGGTCTTaGCGCCCTCGGCATCCACGA +
Preference number: 4 (lower is better)
Translates to: VDKHSACLELVTDIQGLVWSQRS*RPRHPR
Trigger: TCGTGGATGCCGAGGGCGCCAAGACCTCTGAGACCA...AACAAGGCCCTGTATGTCAGTGACAAGCTCCAGGCAGGCACTGTGTTTGTCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp TTCCACGTCTGTGAAAACAGTTGGCTCAAAGAAGAACCCTGGCCGAGGGACCTGCAGGGAGCCAGATCCTaGGAGGACGTTAACCACACC +
Preference number: 4 (lower is better)
Translates to: FHVCENSWLKEEPWPRDLQGARS*EDVNHT
Trigger: GGTGTGGTTAACGTCCTCCCAGGATCTGGCTCCCTG...CAGGTCCCTCGGCCAGGGTTCTTCTTTGAGCCAACTGTTTTCACAGACGTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp TCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTTCCTTCACGCCATGCTaGCAGTACTCCATCAGCTTC +
Preference number: 4 (lower is better)
Translates to: SSEALFSLGGAHLTQPRASFTPC*QYSISF
Trigger: GAAGCTGATGGAGTACTGCCAGCATGGCGTGAAGGA...AGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp TTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCAACACAGTGCCTGCCTaGAGCTTGTCACTGACATAC +
Preference number: 4 (lower is better)
Translates to: FRSFILPGRGTPHPAKGCNTVPA*SLSLTY
Trigger: GTATGTCAGTGACAAGCTCCAGGCAGGCACTGTGTT...GCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp CACGGCATCCAAGTCCCCATCAGCAAACCGAGAGATGATCATGACAGGCCCGAAAGGGCTGCTTCTGACTaGACAGAGGGCGTCCAAGAT +
Preference number: 4 (lower is better)
Translates to: HGIQVPISKPRDDHDRPERAASD*TEGVQD
Trigger: ATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCT...TTCGGGCCTGTCATGATCATCTCTCGGTTTGCTGATGGGGACTTGGATGCCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp TTCTCAGCTTCCAGACAGTGGCAGCTGCTTCCTGCAGTCGCTGTCCCCAATAACTCAGCTTCCAGACAGTaGCAGCTGCTTCCTGCAGTC +
Preference number: 4 (lower is better)
Translates to: FSASRQWQLLPAVAVPNNSASRQ*QLLPAV
Trigger: GACTGCAGGAAGCAGCTGCCACTGTCTGGAAGCTGA...GTTATTGGGGACAGCGACTGCAGGAAGCAGCTGCCACTGTCTGGAAGCTGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000511283.2
CDS-3UTR CCA 90 bp AATTGGCTGCAGAAGGGCAGGACGTTGAGCTCGGCCCCCAAAGCCTGGTATTTTCCAGTAGTCAGAGCCTaGCTGAGCAAGCAGAGACCA +
Preference number: 4 (lower is better)
Translates to: NWLQKGRTLSSAPKAWYFPVVRA*LSKQRP
Trigger: TGGTCTCTGCTTGCTCAGCCAGGCTCTGACTACTGG...AAAATACCAGGCTTTGGGGGCCGAGCTCAACGTCCTGCCCTTCTGCAGCCAATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR CAA 72 bp TGTTTGAATCCTCCGAAGGGAGCGGCCACGTCGGTCTaGTTGTACGTGTTGACAAACACAGTGCCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: CLNPPKGAATSV*LYVLTNTVPAW
Trigger: CCAGGCAGGCACTGTGTTTGTCAACACGTACAACAAGACCGACGTGGCCGCTCCCTTCGGAGGATTCAAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR CAA 72 bp GGCAGCTGCTTCCTGCAGTCGCTGTCCCCAATAACTTaGGGCTCTCTGCCTTCCACTCTTCAATACCCAAGG +
Preference number: 4 (lower is better)
Translates to: GSCFLQSLSPIT*GSLPSTLQYPR
Trigger: CCTTGGGTATTGAAGAGTGGAAGGCAGAGAGCCCAAAGTTATTGGGGACAGCGACTGCAGGAAGCAGCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000511283.2
3UTR CAA 72 bp GGCAAAGCCTGTCCTTTTGCACGCCACCGGGAGTACTaGAATACCGGCACTCCATCCTTCTCAGCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: GKACPFARHREY*NTGTPSFSASR
Trigger: TCTGGAAGCTGAGAAGGATGGAGTGCCGGTATTCAAGTACTCCCGGTGGCGTGCAAAAGGACAGGCTTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR CAA 72 bp ACCAGCCTCACAACGTCCACAGACGCGGCCCCTGACTaGAAGAAATCAGTGGAGTCTTCAACCTCCAGGACT +
Preference number: 4 (lower is better)
Translates to: TSLTTSTDAAPD*KKSVESSTSRT
Trigger: AGTCCTGGAGGTTGAAGACTCCACTGATTTCTTCAAGTCAGGGGCCGCGTCTGTGGACGTTGTGAGGCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR TCA 90 bp CACGGCATCCAAGTCCCCATCAGCAAACCGAGAGATGATCATGACAGGCCCGAACCTTGTCTGGAACAGTaGACACACCCACCACTTCGT +
Preference number: 4 (lower is better)
Translates to: HGIQVPISKPRDDHDRPEPCLEQ*THPPLR
Trigger: ACGAAGTGGTGGGTGTGTTCACTGTTCCAGACAAGG...TTCGGGCCTGTCATGATCATCTCTCGGTTTGCTGATGGGGACTTGGATGCCGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR TCA 90 bp TCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTTTATCTCCATGGGGATaGATTGGCTGCAGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: SSEALFSLGGAHLTQPRALSPWG*IGCRRA
Trigger: TGCCCTTCTGCAGCCAATTCATCCCCATGGAGATAA...AGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp CCGAGAGATGATCATGACAGGCCCGAAGGACTCCTCCTTGGCTATGAACATGTGGTGCCTAGGGAGCAGTaGCGGGTGATAGATGATGGA +
Preference number: 4 (lower is better)
Translates to: PRDDHDRPEGLLLGYEHVVPREQ*RVIDDG
Trigger: TCCATCATCTATCACCCGTCACTGCTCCCTAGGCAC...CACATGTTCATAGCCAAGGAGGAGTCCTTCGGGCCTGTCATGATCATCTCTCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR TCA 90 bp CTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGGCCTTTCTTATCTCCGTaGATGAGGGTCCAGTTGATG +
Preference number: 4 (lower is better)
Translates to: LLLTGQRASKMQTWCAGRPFLSP*MRVQLM
Trigger: CATCAACTGGACCCTCATTCACGGAGATAAGAAAGG...CCTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp TCGCTGTCCCCAATAACTTTGGGCTCTCTGCCTTCCACTCTTCAATACCCAAGGCCGGCTGGTCCCAGTTaGTCTTGGCTGTCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: SLSPITLGSLPSTLQYPRPAGPS*SWLSPS
Trigger: AGAAGGAGACAGCCAAGATCAACTGGGACCAGCCGG...CCTTGGGTATTGAAGAGTGGAAGGCAGAGAGCCCAAAGTTATTGGGGACAGCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR TCA 90 bp GTGCCTGCCTGGAGCTTGTCACTGACATACAGGGCCTTGTTGATGTCCCTGGTGTTGCCATCCTCCAGCTaGATATTCTTCACCAGCAGC +
Preference number: 4 (lower is better)
Translates to: VPAWSLSLTYRALLMSLVLPSSS*IFFTSS
Trigger: GCTGCTGGTGAAGAATATTCAGCTGGAGGATGGCAA...CACCAGGGACATCAACAAGGCCCTGTATGTCAGTGACAAGCTCCAGGCAGGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR TCA 90 bp CTGGCAGTACTCCATCAGCTTCACAAGGTGGGCATGGTGATTCTGCGGCCCGTGGGTCTTCCACGTCTGTaGAAACAGTTGGCTCAAAGA +
Preference number: 4 (lower is better)
Translates to: LAVLHQLHKVGMVILRPVGLPRL*KQLAQR
Trigger: TCTTTGAGCCAACTGTTTTCACAGACGTGGAAGACC...CACGGGCCGCAGAATCACCATGCCCACCTTGTGAAGCTGATGGAGTACTGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR TCA 90 bp CTCTCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGACTCCTCCTTGGCTATaGACATGTGGTCTTCCACGT +
Preference number: 4 (lower is better)
Translates to: LSSEALFSLGGAHLTQPRTPPWL*TCGLPR
Trigger: ACGTGGAAGACCACATGTTCATAGCCAAGGAGGAGT...CCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTTCTTGTTGTACGTGTTaGCAAACACAGTGCCTGCCT +
Preference number: 4 (lower is better)
Translates to: EALFSLGGAHLTQPRAASSCCTC*QTQCLP
Trigger: AGGCAGGCACTGTGTTTGTCAACACGTACAACAAGA...AGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp CTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGGTCTTGTTGTACGTGTTaGCAAACACAGTGCCTGCCT +
Preference number: 4 (lower is better)
Translates to: LLLTGQRASKMQTWCAGRSCCTC*QTQCLP
Trigger: AGGCAGGCACTGTGTTTGTCAACACGTACAACAAGA...CCTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp TCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTCAAGTCTGGGACTCCTaGTTAAATTCCGTCTCTGTC +
Preference number: 4 (lower is better)
Translates to: SEALFSLGGAHLTQPRAAQVWDS*LNSVSV
Trigger: GACAGAGACGGAATTTAATCAGGAGTCCCAGACTTG...AGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472186.5
CDS-3UTR GCA 90 bp CAGCCAAGGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGGCTCTGTCCAATCACTaGAATCTTCATGGTAGCAGG +
Preference number: 4 (lower is better)
Translates to: QPRAASDWTEGVQDADMVALSNH*NLHGSR
Trigger: CCTGCTACCATGAAGATTGCAGTGATTGGACAGAGC...CACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp GCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGCAAAGCCTGGTATTTTaGCACCACATCAGGCAAAGC +
Preference number: 4 (lower is better)
Translates to: AASDWTEGVQDADMVCRQQSLVF*HHIRQS
Trigger: GCTTTGCCTGATGTGGTGGCAAAATACCAGGCTTTG...CTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp CAGCCAAGGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGCAAAGCCTGGTATTTTaGCACCACATCAGGCAAAGC +
Preference number: 4 (lower is better)
Translates to: QPRAASDWTEGVQDADMVQSLVF*HHIRQS
Trigger: GCTTTGCCTGATGTGGTGGCAAAATACCAGGCTTTG...CACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp GAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTCAAAGCCTGGTATTTTaGCACCACATCAGGCAAAGC +
Preference number: 4 (lower is better)
Translates to: EALFSLGGAHLTQPRAASQSLVF*HHIRQS
Trigger: GCTTTGCCTGATGTGGTGGCAAAATACCAGGCTTTG...AGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp CCACTCTCCGCACGAACTCATCATGAATGGAGTCCTCCACAAAGAGTCGGCCTGAAAGAGGATGAGTCCTaGTTTGGTGACCACCCCTGG +
Preference number: 4 (lower is better)
Translates to: PLSARTHHEWSPPQRVGLKEDES*FGDHPW
Trigger: CCAGGGGTGGTCACCAAAGCAGGACTCATCCTCTTT...CAGGCCGACTCTTTGTGGAGGACTCCATTCATGATGAGTTCGTGCGGAGAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR GCA 90 bp GCCAAATTCCGTGGCATTGGCCCGAGACAGCACGGCATCCAAGTCCCCATCAGCGTCCCCAAAGGTGGATaGCATGTACACATCTTCATT +
Preference number: 4 (lower is better)
Translates to: AKFRGIGPRQHGIQVPISVPKGG*HVHIFI
Trigger: AATGAAGATGTGTACATGGCATCCACCTTTGGGGAC...GCTGATGGGGACTTGGATGCCGTGCTGTCTCGGGCCAATGCCACGGAATTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR GCA 90 bp GGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCGTCCCCAAAGGTGGATaGCATGTACACATCTTCATT +
Preference number: 4 (lower is better)
Translates to: GLLLTGQRASKMQTWCAGVPKGG*HVHIFI
Trigger: AATGAAGATGTGTACATGGCATCCACCTTTGGGGAC...GCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp GTGCCTGCCTGGAGCTTGTCACTGACATACAGGGCCTTGTTGATGTCCCTGGTGTTTCCACGTAGTCAATaGTGCACTCGCCCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: VPAWSLSLTYRALLMSLVFPRSQ*CTRPPH
Trigger: ATGAGGAGGGCGAGTGCAGCATTGACTACGTGGAAA...CACCAGGGACATCAACAAGGCCCTGTATGTCAGTGACAAGCTCCAGGCAGGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR GCA 90 bp TCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTTTTCCACGTAGTCAATaGTGCACTCGCCCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: SSEALFSLGGAHLTQPRAFPRSQ*CTRPPH
Trigger: ATGAGGAGGGCGAGTGCAGCATTGACTACGTGGAAA...AGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp GACGTCGGTGACTTGGGCCAGGGATACCTGGCAGATGACACTTCCATCGGTGGGAGTGCGCTTGTTCACTaGCATTTCCACGTAGTCAAT +
Preference number: 4 (lower is better)
Translates to: DVGDLGQGYLADDTSIGGSALVH*HFHVVN
Trigger: ATTGACTACGTGGAAATGGCAGTGAACAAGCGCACT...CCCACCGATGGAAGTGTCATCTGCCAGGTATCCCTGGCCCAAGTCACCGACGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR GCA 90 bp ATGCCGGCCTTTAATGTCAGCTCTGCAAACTTCAAGGCTGTGAGTGGGGTCACCGGGGCATGCGGACAGTaGGCTTGTTCACTGCCATTT +
Preference number: 4 (lower is better)
Translates to: MPAFNVSSANFKAVSGVTGACGQ*ACSLPF
Trigger: AAATGGCAGTGAACAAGCGCACTGTCCGCATGCCCC...GGTGACCCCACTCACAGCCTTGAAGTTTGCAGAGCTGACATTAAAGGCCGGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR GCA 90 bp CTCTCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGCCACACCTTTGGGAATaGCGGCCTTTAATGTCAGCT +
Preference number: 4 (lower is better)
Translates to: LSSEALFSLGGAHLTQPRPHLWE*RPLMSA
Trigger: AGCTGACATTAAAGGCCGGCATTCCCAAAGGTGTGG...CCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp TCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTCCACACCTTTGGGAATaGCGGCCTTTAATGTCAGCT +
Preference number: 4 (lower is better)
Translates to: SSEALFSLGGAHLTQPRAPHLWE*RPLMSA
Trigger: AGCTGACATTAAAGGCCGGCATTCCCAAAGGTGTGG...AGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp CTCTCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGAACTCATCCCCATCTaGACAGCCTTGTTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: LSSEALFSLGGAHLTQPRELIPI*TALLRS
Trigger: TGACCTCAACAAGGCTGTGCAGATGGGGATGAGTTC...CCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp TCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGAACTCATCCCCATCTaGACAGCCTTGTTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: SSEALFSLGGAHLTQPRAELIPI*TALLRS
Trigger: TGACCTCAACAAGGCTGTGCAGATGGGGATGAGTTC...AGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp GCCAAATTCCGTGGCATTGGCCCGAGACAGCACGGCATCCAAGTCCCCATCAGCAAAGAGTCGGCCTGCTaGAATGCAATTCTCTCCTTT +
Preference number: 4 (lower is better)
Translates to: AKFRGIGPRQHGIQVPISKESAC*NAILSF
Trigger: AAAGGAGAGAATTGCATTGCAGCAGGCCGACTCTTT...GCTGATGGGGACTTGGATGCCGTGCTGTCTCGGGCCAATGCCACGGAATTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp TTCCACGTCTGTGAAAACAGTTGGCTCAAAGAAGAACCCTGGCCGAGGGACCTGGAATCCCCTCATAGGTaGCTCCTTCCTCAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: FHVCENSWLKEEPWPRDLESPHR*LLPQAE
Trigger: CTCAGCCTGAGGAAGGAGCCACCTATGAGGGGATTC...CAGGTCCCTCGGCCAGGGTTCTTCTTTGAGCCAACTGTTTTCACAGACGTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp GTTGACAAACACAGTGCCTGCCTGGAGCTTGTCACTGACATACAGGGCCTTGTTATGGCCTCTGCCGGCTaGTCCCAGTTGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: VDKHSACLELVTDIQGLVMASAG*SQLILA
Trigger: AGCCAAGATCAACTGGGACCAGCCGGCAGAGGCCAT...AACAAGGCCCTGTATGTCAGTGACAAGCTCCAGGCAGGCACTGTGTTTGTCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp GAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTTTCCTCACTAACAGCTaGATGAAGTCCCCAAAGGTG +
Preference number: 4 (lower is better)
Translates to: EALFSLGGAHLTQPRAASFLTNS*MKSPKV
Trigger: CACCTTTGGGGACTTCATCCAGCTGTTAGTGAGGAA...AGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GCATTGGCCCGAGACAGCACGGCATCCAAGTCCCCATCAGCAAACCGAGAGATGTTCCTCACTAACAGCTaGATGAAGTCCCCAAAGGTG +
Preference number: 4 (lower is better)
Translates to: ALARDSTASKSPSANREMFLTNS*MKSPKV
Trigger: CACCTTTGGGGACTTCATCCAGCTGTTAGTGAGGAA...CATCTCTCGGTTTGCTGATGGGGACTTGGATGCCGTGCTGTCTCGGGCCAATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp CAGCCAAGGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTTCCTCACTAACAGCTaGATGAAGTCCCCAAAGGTG +
Preference number: 4 (lower is better)
Translates to: QPRAASDWTEGVQDADMVFLTNS*MKSPKV
Trigger: CACCTTTGGGGACTTCATCCAGCTGTTAGTGAGGAA...CACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GGCCCGAAGGACTCCTCCTTGGCTATGAACATGTGGTCTTCCACGTCTGTGAAATGGGCCAGGGATACCTaGCAGATGACACTTCCATCG +
Preference number: 4 (lower is better)
Translates to: GPKDSSLAMNMWSSTSVKWARDT*QMTLPS
Trigger: CGATGGAAGTGTCATCTGCCAGGTATCCCTGGCCCA...TTTCACAGACGTGGAAGACCACATGTTCATAGCCAAGGAGGAGTCCTTCGGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp CCACTCTCCGCACGAACTCATCATGAATGGAGTCCTCCACAAAGAGTCGGCCTGTCCTTCACGCCATGCTaGCAGTACTCCATCAGCTTC +
Preference number: 4 (lower is better)
Translates to: PLSARTHHEWSPPQRVGLSFTPC*QYSISF
Trigger: GAAGCTGATGGAGTACTGCCAGCATGGCGTGAAGGA...CAGGCCGACTCTTTGTGGAGGACTCCATTCATGATGAGTTCGTGCGGAGAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp CCAGATCCTGGGAGGACGTTAACCACACCTTTGGGAATGCCGGCCTTTAATGTCCAAATTCCGTGGCATTaGCCCGAGACAGCACGGCAT +
Preference number: 4 (lower is better)
Translates to: PDPGRTLTTPLGMPAFNVQIPWH*PETARH
Trigger: ATGCCGTGCTGTCTCGGGCCAATGCCACGGAATTTG...GACATTAAAGGCCGGCATTCCCAAAGGTGTGGTTAACGTCCTCCCAGGATCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp ATGTCCCTGGTGAAGACACCAGAAGCCAGGCCAAATTCCGTGGCATTGGCCCGAAACACAGTGCCTGCCTaGAGCTTGTCACTGACATAC +
Preference number: 4 (lower is better)
Translates to: MSLVKTPEARPNSVALARNTVPA*SLSLTY
Trigger: GTATGTCAGTGACAAGCTCCAGGCAGGCACTGTGTT...TCGGGCCAATGCCACGGAATTTGGCCTGGCTTCTGGTGTCTTCACCAGGGACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp GCCTTCCACTCTTCAATACCCAAGGAACACTTCTTTGTATTCAGTTCTCTGTTAACCGCGCGCAGGAGTTaGTGCGGGCGTCCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: AFHSSIPKEHFFVFSSLLTARRS*CGRPGQ
Trigger: CTGCCCGGGACGCCCGCACCAACTCCTGCGCGCGGT...TAACAGAGAACTGAATACAAAGAAGTGTTCCTTGGGTATTGAAGAGTGGAAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR CAA 72 bp AGGGAGCCAGATCCTGGGAGGACGTTAACCACACCTTaGGGAATGCCGGCCTTTAATGTCAGCTCTGCAAAC +
Preference number: 4 (lower is better)
Translates to: REPDPGRTLTTP*GMPAFNVSSAN
Trigger: GTTTGCAGAGCTGACATTAAAGGCCGGCATTCCCAAAGGTGTGGTTAACGTCCTCCCAGGATCTGGCTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR CAA 72 bp ATTTTGTCATCATTCCCAAAGAGGATGAGTCCTGCTTaGGTGACCACCCCTGGCCGATGGGCTCCTGGGATG +
Preference number: 4 (lower is better)
Translates to: ILSSFPKRMSPA*VTTPGRWAPGM
Trigger: CATCCCAGGAGCCCATCGGCCAGGGGTGGTCACCAAAGCAGGACTCATCCTCTTTGGGAATGATGACAAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000493803.5
3UTR CAA 72 bp TTGAAGAAATCAGTGGAGTCTTCAACCTCCAGGACTTaGGGGAGGATCCGCTGCCAAACACTCCGCACAGCC +
Preference number: 4 (lower is better)
Translates to: LKKSVESSTSRT*GRIRCQTLRTA
Trigger: GGCTGTGCGGAGTGTTTGGCAGCGGATCCTCCCCAAAGTCCTGGAGGTTGAAGACTCCACTGATTTCTTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR TCA 90 bp TCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTCCTTTCTTATCTCCGTaGATGAGGGTCCAGTTGATG +
Preference number: 4 (lower is better)
Translates to: SSEALFSLGGAHLTQPRAPFLSP*MRVQLM
Trigger: CATCAACTGGACCCTCATTCACGGAGATAAGAAAGG...AGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GGCCCGAAGGACTCCTCCTTGGCTATGAACATGTGGTCTTCCACGTCTGTGAAAACGCGGCCCCTGACTTaGAGAAATCAGTGGAGTCTT +
Preference number: 4 (lower is better)
Translates to: GPKDSSLAMNMWSSTSVKTRPLT*RNQWSL
Trigger: AAGACTCCACTGATTTCTTCAAGTCAGGGGCCGCGT...TTTCACAGACGTGGAAGACCACATGTTCATAGCCAAGGAGGAGTCCTTCGGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR TCA 90 bp CCGAGAGATGATCATGACAGGCCCGAAGGACTCCTCCTTGGCTATGAACATGTGACGCGGCCCCTGACTTaGAGAAATCAGTGGAGTCTT +
Preference number: 4 (lower is better)
Translates to: PRDDHDRPEGLLLGYEHVTRPLT*RNQWSL
Trigger: AAGACTCCACTGATTTCTTCAAGTCAGGGGCCGCGT...CACATGTTCATAGCCAAGGAGGAGTCCTTCGGGCCTGTCATGATCATCTCTCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR TCA 90 bp CCAGATCCTGGGAGGACGTTAACCACACCTTTGGGAATGCCGGCCTTTAATGTCTTCCATCGGTGGGATTaGTGGTCTCAGAGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: PDPGRTLTTPLGMPAFNVFHRWD*WSQRSW
Trigger: CCAAGACCTCTGAGACCATCAATCCCACCGATGGAA...GACATTAAAGGCCGGCATTCCCAAAGGTGTGGTTAACGTCCTCCCAGGATCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR TCA 90 bp CAGGGACTTTCTTCTCACAAAGACCTTTCTTCAGTATTCGAAGGTCACTGTCTTCCCGGTCCCGCGCACTaGTCTTCCCCCACCGTCCAT +
Preference number: 4 (lower is better)
Translates to: QGLSSHKDLSSVFEGHCLPGPAH*SSPTVH
Trigger: ATGGACGGTGGGGGAAGATCAGTGCGCGGGACCGGG...AAGACAGTGACCTTCGAATACTGAAGAAAGGTCTTTGTGAGAAGAAAGTCCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR TCA 90 bp CTCTCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGGTCTTCCACGTCTGTaGAAACAGTTGGCTCAAAGA +
Preference number: 4 (lower is better)
Translates to: LSSEALFSLGGAHLTQPRGLPRL*KQLAQR
Trigger: TCTTTGAGCCAACTGTTTTCACAGACGTGGAAGACC...CCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GTGGACGGTCTCTCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCGGTCTTCCACGTCTGTaGAAACAGTTGGCTCAAAGA +
Preference number: 4 (lower is better)
Translates to: VDGLSSEALFSLGGAHLTGLPRL*KQLAQR
Trigger: TCTTTGAGCCAACTGTTTTCACAGACGTGGAAGACC...GGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGAGAGACCGTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455064.6
CDS-3UTR TCA 90 bp CCAGATCCTGGGAGGACGTTAACCACACCTTTGGGAATGCCGGCCTTTAATGTCCAAATCCAGACTGTTTaGATCCTCCGAAGGGAGCGG +
Preference number: 4 (lower is better)
Translates to: PDPGRTLTTPLGMPAFNVQIQTV*ILRRER
Trigger: CCGCTCCCTTCGGAGGATTCAAACAGTCTGGATTTG...GACATTAAAGGCCGGCATTCCCAAAGGTGTGGTTAACGTCCTCCCAGGATCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR GCA 90 bp ATGTCCCTGGTGAAGACACCAGAAGCCAGGCCAAATTCCGTGGCATTGGCCCGAGCTCTGTCCAATCACTaGAATCTTCATGGTAGCAGG +
Preference number: 4 (lower is better)
Translates to: MSLVKTPEARPNSVALARALSNH*NLHGSR
Trigger: CCTGCTACCATGAAGATTGCAGTGATTGGACAGAGC...TCGGGCCAATGCCACGGAATTTGGCCTGGCTTCTGGTGTCTTCACCAGGGACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR GCA 90 bp TCATTCCCAAAGAGGATGAGTCCTGCTTTGGTGACCACCCCTGGCCGATGGGCTGCTCTGTCCAATCACTaGAATCTTCATGGTAGCAGG +
Preference number: 4 (lower is better)
Translates to: SFPKRMSPALVTTPGRWAALSNH*NLHGSR
Trigger: CCTGCTACCATGAAGATTGCAGTGATTGGACAGAGC...AGCCCATCGGCCAGGGGTGGTCACCAAAGCAGGACTCATCCTCTTTGGGAATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000493803.5
CDS-3UTR GCA 90 bp CCGAGAGATGATCATGACAGGCCCGAAGGACTCCTCCTTGGCTATGAACATGTGAAAGAGGATGAGTCCTaGTTTGGTGACCACCCCTGG +
Preference number: 4 (lower is better)
Translates to: PRDDHDRPEGLLLGYEHVKEDES*FGDHPW
Trigger: CCAGGGGTGGTCACCAAAGCAGGACTCATCCTCTTT...CACATGTTCATAGCCAAGGAGGAGTCCTTCGGGCCTGTCATGATCATCTCTCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR GCA 90 bp GAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTAGGCCAGGATCATTTTaGCATCCTCCAGCTGAATAT +
Preference number: 4 (lower is better)
Translates to: EALFSLGGAHLTQPRAASRPGSF*HPPAEY
Trigger: ATATTCAGCTGGAGGATGGCAAAATGATCCTGGCCT...AGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp TCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTGTCCCCAAAGGTGGATaGCATGTACACATCTTCATT +
Preference number: 4 (lower is better)
Translates to: SEALFSLGGAHLTQPRAAVPKGG*HVHIFI
Trigger: AATGAAGATGTGTACATGGCATCCACCTTTGGGGAC...AGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp TCAGGCAAAGCCTGTCCTTTTGCACGCCACCGGGAGTACTTGAATACCGGCACTTTTCCACGTAGTCAATaGTGCACTCGCCCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: SGKACPFARHREYLNTGTFPRSQ*CTRPPH
Trigger: ATGAGGAGGGCGAGTGCAGCATTGACTACGTGGAAA...AGTGCCGGTATTCAAGTACTCCCGGTGGCGTGCAAAAGGACAGGCTTTGCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR GCA 90 bp GCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGAGTGCGCTTGTTCACTaGCATTTCCACGTAGTCAAT +
Preference number: 4 (lower is better)
Translates to: AASDWTEGVQDADMVCRQSALVH*HFHVVN
Trigger: ATTGACTACGTGGAAATGGCAGTGAACAAGCGCACT...CTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp CAGCCAAGGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGAGTGCGCTTGTTCACTaGCATTTCCACGTAGTCAAT +
Preference number: 4 (lower is better)
Translates to: QPRAASDWTEGVQDADMVSALVH*HFHVVN
Trigger: ATTGACTACGTGGAAATGGCAGTGAACAAGCGCACT...CACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp GAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTAGTGCGCTTGTTCACTaGCATTTCCACGTAGTCAAT +
Preference number: 4 (lower is better)
Translates to: EALFSLGGAHLTQPRAASSALVH*HFHVVN
Trigger: ATTGACTACGTGGAAATGGCAGTGAACAAGCGCACT...AGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp CTCATCATGAATGGAGTCCTCCACAAAGAGTCGGCCTGCTGCAATGCAATTCTCAGAGCTGGTGGGGCATaGGGACAGTGCGCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: LIMNGVLHKESACCNAILRAGGA*GQCACS
Trigger: TGAACAAGCGCACTGTCCGCATGCCCCACCAGCTCT...GAGAATTGCATTGCAGCAGGCCGACTCTTTGTGGAGGACTCCATTCATGATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR GCA 90 bp CTGGCAGTACTCCATCAGCTTCACAAGGTGGGCATGGTGATTCTGCGGCCCGTGAAAGAGTCGGCCTGCTaGAATGCAATTCTCTCCTTT +
Preference number: 4 (lower is better)
Translates to: LAVLHQLHKVGMVILRPVKESAC*NAILSF
Trigger: AAAGGAGAGAATTGCATTGCAGCAGGCCGACTCTTT...CACGGGCCGCAGAATCACCATGCCCACCTTGTGAAGCTGATGGAGTACTGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR GCA 90 bp TCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTAAAGAGTCGGCCTGCTaGAATGCAATTCTCTCCTTT +
Preference number: 4 (lower is better)
Translates to: SEALFSLGGAHLTQPRAAKESAC*NAILSF
Trigger: AAAGGAGAGAATTGCATTGCAGCAGGCCGACTCTTT...AGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp GTTGCCCACCTTCATCTTCCGCACCTCTTCTACCACTCTCCGCACGAACTCATCCACAAAGAGTCGGCCTaGTGCAATGCAATTCTCTCC +
Preference number: 4 (lower is better)
Translates to: VAHLHLPHLFYHSPHELIHKESA*CNAILS
Trigger: GGAGAGAATTGCATTGCAGCAGGCCGACTCTTTGTG...GATGAGTTCGTGCGGAGAGTGGTAGAAGAGGTGCGGAAGATGAAGGTGGGCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp TATGGCACAGCTTTTCATGATGTGCTTGCCCACCTCTGTGGAGCCTGTGAACCCTCGGCCCCCAAAGCCTaGTATTTTGCCACCACATCA +
Preference number: 4 (lower is better)
Translates to: YGTAFHDVLAHLCGACEPSAPKA*YFATTS
Trigger: TGATGTGGTGGCAAAATACCAGGCTTTGGGGGCCGA...GGGTTCACAGGCTCCACAGAGGTGGGCAAGCACATCATGAAAAGCTGTGCCATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000455064.6
CDS-3UTR CCA 90 bp GCACTGATTATCTCCATGGGGATGAATTGGCTGCAGAAGGGCAGGACGTTGAGCTCGGCCCCCAAAGCCTaGTATTTTGCCACCACATCA +
Preference number: 4 (lower is better)
Translates to: ALIISMGMNWLQKGRTLSSAPKA*YFATTS
Trigger: TGATGTGGTGGCAAAATACCAGGCTTTGGGGGCCGA...GCTCAACGTCCTGCCCTTCTGCAGCCAATTCATCCCCATGGAGATAATCAGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR CCA 90 bp CTCTCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGTTCCTCACTAACAGCTaGATGAAGTCCCCAAAGGTG +
Preference number: 4 (lower is better)
Translates to: LSSEALFSLGGAHLTQPRFLTNS*MKSPKV
Trigger: CACCTTTGGGGACTTCATCCAGCTGTTAGTGAGGAA...CCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp TCATTCCCAAAGAGGATGAGTCCTGCTTTGGTGACCACCCCTGGCCGATGGGCTTTCCTCACTAACAGCTaGATGAAGTCCCCAAAGGTG +
Preference number: 4 (lower is better)
Translates to: SFPKRMSPALVTTPGRWAFLTNS*MKSPKV
Trigger: CACCTTTGGGGACTTCATCCAGCTGTTAGTGAGGAA...AGCCCATCGGCCAGGGGTGGTCACCAAAGCAGGACTCATCCTCTTTGGGAATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR CCA 90 bp CATCTTCCGCACCTCTTCTACCACTCTCCGCACGAACTCATCATGAATGGAGTCTCTCAAAGGCATCCTTaGCTGCGGCCACTGCCTTGT +
Preference number: 4 (lower is better)
Translates to: HLPHLFYHSPHELIMNGVSQRHP*LRPLPC
Trigger: ACAAGGCAGTGGCCGCAGCCAAGGATGCCTTTGAGA...GACTCCATTCATGATGAGTTCGTGCGGAGAGTGGTAGAAGAGGTGCGGAAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp AAGACCTTTCTTCAGTATTCGAAGGTCACTGTCTTGACCCGCAGGTACTCGTTCCGGTTGGGTCTGGCCTaGTTGATGGGGATGGTGGAG +
Preference number: 4 (lower is better)
Translates to: KTFLQYSKVTVLTRRYSFRLGLA*LMGMVE
Trigger: CTCCACCATCCCCATCAACCAGGCCAGACCCAACCG...GAACGAGTACCTGCGGGTCAAGACAGTGACCTTCGAATACTGAAGAAAGGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp GACCTTTCTTCAGTATTCGAAGGTCACTGTCTTGACCCGCAGGTACTCGTTCAGTGGTCTGAGAGTCTCTaGCCGACCAGGGAGCCAGAT +
Preference number: 4 (lower is better)
Translates to: DLSSVFEGHCLDPQVLVQWSESL*PTREPD
Trigger: ATCTGGCTCCCTGGTCGGCCAGAGACTCTCAGACCA...CTGAACGAGTACCTGCGGGTCAAGACAGTGACCTTCGAATACTGAAGAAAGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp TCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTCGAACTCATCATGAATaGAGTCCTCCACAAAGAGTC +
Preference number: 4 (lower is better)
Translates to: SEALFSLGGAHLTQPRAARTHHE*SPPQRV
Trigger: GACTCTTTGTGGAGGACTCCATTCATGATGAGTTCG...AGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GCATTGGCCCGAGACAGCACGGCATCCAAGTCCCCATCAGCAAACCGAGAGATGCGAACTCATCATGAATaGAGTCCTCCACAAAGAGTC +
Preference number: 4 (lower is better)
Translates to: ALARDSTASKSPSANREMRTHHE*SPPQRV
Trigger: GACTCTTTGTGGAGGACTCCATTCATGATGAGTTCG...CATCTCTCGGTTTGCTGATGGGGACTTGGATGCCGTGCTGTCTCGGGCCAATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp TTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCCGAACTCATCATGAATaGAGTCCTCCACAAAGAGTC +
Preference number: 4 (lower is better)
Translates to: FRSFILPGRGTPHPAKGCRTHHE*SPPQRV
Trigger: GACTCTTTGTGGAGGACTCCATTCATGATGAGTTCG...GCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GGCCCGAAGGACTCCTCCTTGGCTATGAACATGTGGTCTTCCACGTCTGTGAAATCCTTCACGCCATGCTaGCAGTACTCCATCAGCTTC +
Preference number: 4 (lower is better)
Translates to: GPKDSSLAMNMWSSTSVKSFTPC*QYSISF
Trigger: GAAGCTGATGGAGTACTGCCAGCATGGCGTGAAGGA...TTTCACAGACGTGGAAGACCACATGTTCATAGCCAAGGAGGAGTCCTTCGGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp TACCGGCACTCCATCCTTCTCAGCTTCCAGACAGTGGCAGCTGCTTCCTGCAGTCTAGAAGCTGTACTTTaGATCCCGCTTCTGACACCA +
Preference number: 4 (lower is better)
Translates to: YRHSILLSFQTVAAASCSLEAVL*IPLLTP
Trigger: TGGTGTCAGAAGCGGGATCCAAAGTACAGCTTCTAG...ACTGCAGGAAGCAGCTGCCACTGTCTGGAAGCTGAGAAGGATGGAGTGCCGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511283.2
CDS-3UTR TCA 90 bp CGTGTTGACAAACACAGTGCCTGCCTGGAGCTTGTCACTGACATACAGGGCCTTTTATCTCCATGGGGATaGATTGGCTGCAGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: RVDKHSACLELVTDIQGLLSPWG*IGCRRA
Trigger: TGCCCTTCTGCAGCCAATTCATCCCCATGGAGATAA...AAGGCCCTGTATGTCAGTGACAAGCTCCAGGCAGGCACTGTGTTTGTCAACACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR TCA 90 bp CTCATCATGAATGGAGTCCTCCACAAAGAGTCGGCCTGCTGCAATGCAATTCTCCACAGACGCGGCCCCTaGCTTGAAGAAATCAGTGGA +
Preference number: 4 (lower is better)
Translates to: LIMNGVLHKESACCNAILHRRGP*LEEISG
Trigger: TCCACTGATTTCTTCAAGTCAGGGGCCGCGTCTGTG...GAGAATTGCATTGCAGCAGGCCGACTCTTTGTGGAGGACTCCATTCATGATGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR TCA 90 bp TCCGCACCTCTTCTACCACTCTCCGCACGAACTCATCATGAATGGAGTCCTCCATCACTAACAGCTGGATaGAGTCCCCAAAGGTGGATG +
Preference number: 4 (lower is better)
Translates to: SAPLLPLSARTHHEWSPPSLTAG*SPQRWM
Trigger: CATCCACCTTTGGGGACTTCATCCAGCTGTTAGTGA...TGGAGGACTCCATTCATGATGAGTTCGTGCGGAGAGTGGTAGAAGAGGTGCGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR GCA 90 bp TCTCCGCACGAACTCATCATGAATGGAGTCCTCCACAAAGAGTCGGCCTGCTGCGCTCTGTCCAATCACTaGAATCTTCATGGTAGCAGG +
Preference number: 4 (lower is better)
Translates to: SPHELIMNGVLHKESACCALSNH*NLHGSR
Trigger: CCTGCTACCATGAAGATTGCAGTGATTGGACAGAGC...GCAGCAGGCCGACTCTTTGTGGAGGACTCCATTCATGATGAGTTCGTGCGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR GCA 90 bp GTTGACAAACACAGTGCCTGCCTGGAGCTTGTCACTGACATACAGGGCCTTGTTCAAAGCCTGTCCTTTTaGACGCCACCGGGAGTACTT +
Preference number: 4 (lower is better)
Translates to: VDKHSACLELVTDIQGLVQSLSF*TPPGVL
Trigger: AAGTACTCCCGGTGGCGTGCAAAAGGACAGGCTTTG...AACAAGGCCCTGTATGTCAGTGACAAGCTCCAGGCAGGCACTGTGTTTGTCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR GCA 90 bp GTTGCCCACCTTCATCTTCCGCACCTCTTCTACCACTCTCCGCACGAACTCATCCAAAGCCTGGTATTTTaGCACCACATCAGGCAAAGC +
Preference number: 4 (lower is better)
Translates to: VAHLHLPHLFYHSPHELIQSLVF*HHIRQS
Trigger: GCTTTGCCTGATGTGGTGGCAAAATACCAGGCTTTG...GATGAGTTCGTGCGGAGAGTGGTAGAAGAGGTGCGGAAGATGAAGGTGGGCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR GCA 90 bp CTCTCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGAGGCCAGGATCATTTTaGCATCCTCCAGCTGAATAT +
Preference number: 4 (lower is better)
Translates to: LSSEALFSLGGAHLTQPRRPGSF*HPPAEY
Trigger: ATATTCAGCTGGAGGATGGCAAAATGATCCTGGCCT...CCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp TCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGTCCCCAAAGGTGGATaGCATGTACACATCTTCATT +
Preference number: 4 (lower is better)
Translates to: SSEALFSLGGAHLTQPRAVPKGG*HVHIFI
Trigger: AATGAAGATGTGTACATGGCATCCACCTTTGGGGAC...AGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp CTCTCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGAGTGCGCTTGTTCACTaGCATTTCCACGTAGTCAAT +
Preference number: 4 (lower is better)
Translates to: LSSEALFSLGGAHLTQPRSALVH*HFHVVN
Trigger: ATTGACTACGTGGAAATGGCAGTGAACAAGCGCACT...CCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp CCGAGAGATGATCATGACAGGCCCGAAGGACTCCTCCTTGGCTATGAACATGTGCCACACCTTTGGGAATaGCGGCCTTTAATGTCAGCT +
Preference number: 4 (lower is better)
Translates to: PRDDHDRPEGLLLGYEHVPHLWE*RPLMSA
Trigger: AGCTGACATTAAAGGCCGGCATTCCCAAAGGTGTGG...CACATGTTCATAGCCAAGGAGGAGTCCTTCGGGCCTGTCATGATCATCTCTCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR GCA 90 bp CCTAGATCTTTGCCAAATCCAGACTGTTTGAATCCTCCGAAGGGAGCGGCCACGCACAAAGAGTCGGCCTaGTGCAATGCAATTCTCTCC +
Preference number: 4 (lower is better)
Translates to: PRSLPNPDCLNPPKGAATHKESA*CNAILS
Trigger: GGAGAGAATTGCATTGCAGCAGGCCGACTCTTTGTG...CGTGGCCGCTCCCTTCGGAGGATTCAAACAGTCTGGATTTGGCAAAGATCTAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp CTCCTTGGCTATGAACATGTGGTCTTCCACGTCTGTGAAAACAGTTGGCTCAAACCCCCAATGAAGAGCTaGTGGGGCATGCGGACAGTG +
Preference number: 4 (lower is better)
Translates to: LLGYEHVVFHVCENSWLKPPMKS*WGMRTV
Trigger: CACTGTCCGCATGCCCCACCAGCTCTTCATTGGGGG...TTTGAGCCAACTGTTTTCACAGACGTGGAAGACCACATGTTCATAGCCAAGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp CTGTCCCCAATAACTTTGGGCTCTCTGCCTTCCACTCTTCAATACCCAAGGAACTGGGCCAGGGATACCTaGCAGATGACACTTCCATCG +
Preference number: 4 (lower is better)
Translates to: LSPITLGSLPSTLQYPRNWARDT*QMTLPS
Trigger: CGATGGAAGTGTCATCTGCCAGGTATCCCTGGCCCA...GTTCCTTGGGTATTGAAGAGTGGAAGGCAGAGAGCCCAAAGTTATTGGGGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR CCA 90 bp GTCCCCAATAACTTTGGGCTCTCTGCCTTCCACTCTTCAATACCCAAGGAACACTCTCAAAGGCATCCTTaGCTGCGGCCACTGCCTTGT +
Preference number: 4 (lower is better)
Translates to: VPNNFGLSAFHSSIPKEHSQRHP*LRPLPC
Trigger: ACAAGGCAGTGGCCGCAGCCAAGGATGCCTTTGAGA...GTGTTCCTTGGGTATTGAAGAGTGGAAGGCAGAGAGCCCAAAGTTATTGGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR CCA 90 bp GGACTCCTCCTTGGCTATGAACATGTGGTCTTCCACGTCTGTGAAAACAGTTGGCTTCAAGGCTGTGAGTaGGGTCACCTGAGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: GLLLGYEHVVFHVCENSWLQGCE*GHLSRL
Trigger: AAGCCTGCTCAGGTGACCCCACTCACAGCCTTGAAG...CCAACTGTTTTCACAGACGTGGAAGACCACATGTTCATAGCCAAGGAGGAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp TCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTCGAACTCATCATGAATaGAGTCCTCCACAAAGAGTC +
Preference number: 4 (lower is better)
Translates to: SSEALFSLGGAHLTQPRARTHHE*SPPQRV
Trigger: GACTCTTTGTGGAGGACTCCATTCATGATGAGTTCG...AGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GTTGACAAACACAGTGCCTGCCTGGAGCTTGTCACTGACATACAGGGCCTTGTTTTATCTCCATGGGGATaGATTGGCTGCAGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: VDKHSACLELVTDIQGLVLSPWG*IGCRRA
Trigger: TGCCCTTCTGCAGCCAATTCATCCCCATGGAGATAA...AACAAGGCCCTGTATGTCAGTGACAAGCTCCAGGCAGGCACTGTGTTTGTCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR TCA 90 bp ATGCCGGCCTTTAATGTCAGCTCTGCAAACTTCAAGGCTGTGAGTGGGGTCACCCCTTTCTTATCTCCGTaGATGAGGGTCCAGTTGATG +
Preference number: 4 (lower is better)
Translates to: MPAFNVSSANFKAVSGVTPFLSP*MRVQLM
Trigger: CATCAACTGGACCCTCATTCACGGAGATAAGAAAGG...GGTGACCCCACTCACAGCCTTGAAGTTTGCAGAGCTGACATTAAAGGCCGGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR GCA 90 bp TCCAGGGACACCTTCTTCACGTTACTTATGGCACAGCTTTTCATGATGTGCTTGACCTCACACTCCTTCTaGAGCAGCAGGTCTCCGGTG +
Preference number: 4 (lower is better)
Translates to: SRDTFFTLLMAQLFMMCLTSHSF*SSRSPV
Trigger: CACCGGAGACCTGCTGCTGCAGAAGGAGTGTGAGGT...CAAGCACATCATGAAAAGCTGTGCCATAAGTAACGTGAAGAAGGTGTCCCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455064.6
CDS-3UTR GCA 90 bp ACACTTCTTTGTATTCAGTTCTCTGTTAGAGCCTCTGGTGTGATGTTTGGGCCCAAAGGCATCCTTGGCTaGGGCCACTGCCTTGTCGAC +
Preference number: 4 (lower is better)
Translates to: TLLCIQFSVRASGVMFGPKGILG*GHCLVD
Trigger: GTCGACAAGGCAGTGGCCGCAGCCAAGGATGCCTTT...GGGCCCAAACATCACACCAGAGGCTCTAACAGAGAACTGAATACAAAGAAGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR CCA 90 bp AGGCCTGAAGTGTTCAGCGTTGAGTTGAAAAATGTCAGTTTCTGTTCACAGGCCATGGCCTCTGCCGGCTaGTCCCAGTTGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: RPEVFSVELKNVSFCSQAMASAG*SQLILA
Trigger: AGCCAAGATCAACTGGGACCAGCCGGCAGAGGCCAT...GGCCTGTGAACAGAAACTGACATTTTTCAACTCAACGCTGAACACTTCAGGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000493803.5
CDS-3UTR CCA 90 bp AAGACCTTTCTTCAGTATTCGAAGGTCACTGTCTTGACCCGCAGGTACTCGTTCCAACCTCCAGGACTTTaGGGAGGATCCGCTGCCAAA +
Preference number: 4 (lower is better)
Translates to: KTFLQYSKVTVLTRRYSFQPPGL*GGSAAK
Trigger: TTTGGCAGCGGATCCTCCCCAAAGTCCTGGAGGTTG...GAACGAGTACCTGCGGGTCAAGACAGTGACCTTCGAATACTGAAGAAAGGTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp TCTTCCACGTCTGTGAAAACAGTTGGCTCAAAGAAGAACCCTGGCCGAGGGACCTTCCTCACTAACAGCTaGATGAAGTCCCCAAAGGTG +
Preference number: 4 (lower is better)
Translates to: SSTSVKTVGSKKNPGRGTFLTNS*MKSPKV
Trigger: CACCTTTGGGGACTTCATCCAGCTGTTAGTGAGGAA...GGTCCCTCGGCCAGGGTTCTTCTTTGAGCCAACTGTTTTCACAGACGTGGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp GCAGGGACTTTCTTCTCACAAAGACCTTTCTTCAGTATTCGAAGGTCACTGTCTTCGACGTCGGTGACTTaGGCCAGGGATACCTGGCAG +
Preference number: 4 (lower is better)
Translates to: AGTFFSQRPFFSIRRSLSSTSVT*ARDTWQ
Trigger: CTGCCAGGTATCCCTGGCCCAAGTCACCGACGTCGA...AGACAGTGACCTTCGAATACTGAAGAAAGGTCTTTGTGAGAAGAAAGTCCCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR CAA 72 bp CGAGAGATGATCATGACAGGCCCGAAGGACTCCTCCTaGGCTATGAACATGTGGTCTTCCACGTCTGTGAAA +
Preference number: 4 (lower is better)
Translates to: REMIMTGPKDSS*AMNMWSSTSVK
Trigger: TTTCACAGACGTGGAAGACCACATGTTCATAGCCAAGGAGGAGTCCTTCGGGCCTGTCATGATCATCTCTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR CAA 72 bp ACAAAGACCTTTCTTCAGTATTCGAAGGTCACTGTCTaGACCCGCAGGTACTCGTTCAGAGCCGCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: TKTFLQYSKVTV*TRRYSFRAASP
Trigger: AGGAGAGGCGGCTCTGAACGAGTACCTGCGGGTCAAGACAGTGACCTTCGAATACTGAAGAAAGGTCTTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR TCA 90 bp GAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTTGTTCAGCGTTGAGTTaGAAAATGTCAGTTTCTGTT +
Preference number: 4 (lower is better)
Translates to: EALFSLGGAHLTQPRAASCSALS*KMSVSV
Trigger: AACAGAAACTGACATTTTTCAACTCAACGCTGAACA...AGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGTGTTCAGCGTTGAGTTaGAAAATGTCAGTTTCTGTT +
Preference number: 4 (lower is better)
Translates to: AASDWTEGVQDADMVCRQCSALS*KMSVSV
Trigger: AACAGAAACTGACATTTTTCAACTCAACGCTGAACA...CTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp CCAAATTCCGTGGCATTGGCCCGAGACAGCACGGCATCCAAGTCCCCATCAGCATGTTCAGCGTTGAGTTaGAAAATGTCAGTTTCTGTT +
Preference number: 4 (lower is better)
Translates to: PNSVALARDSTASKSPSACSALS*KMSVSV
Trigger: AACAGAAACTGACATTTTTCAACTCAACGCTGAACA...TGCTGATGGGGACTTGGATGCCGTGCTGTCTCGGGCCAATGCCACGGAATTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR TCA 90 bp TCCATTCTCAAAGGCATCCTTGGCTGCGGCCACTGCCTTGTCGACGTCGGTGACTGTTCAGCGTTGAGTTaGAAAATGTCAGTTTCTGTT +
Preference number: 4 (lower is better)
Translates to: SILKGILGCGHCLVDVGDCSALS*KMSVSV
Trigger: AACAGAAACTGACATTTTTCAACTCAACGCTGAACA...GTCACCGACGTCGACAAGGCAGTGGCCGCAGCCAAGGATGCCTTTGAGAATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR TCA 90 bp GGACTCCTCCTTGGCTATGAACATGTGGTCTTCCACGTCTGTGAAAACAGTTGGACTCCTCCTTGGCTATaGACATGTGGTCTTCCACGT +
Preference number: 4 (lower is better)
Translates to: GLLLGYEHVVFHVCENSWTPPWL*TCGLPR
Trigger: ACGTGGAAGACCACATGTTCATAGCCAAGGAGGAGT...CCAACTGTTTTCACAGACGTGGAAGACCACATGTTCATAGCCAAGGAGGAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR TCA 90 bp GCAGGGACTTTCTTCTCACAAAGACCTTTCTTCAGTATTCGAAGGTCACTGTCTCAGGTTAGACTTCTGTaGGCCGCAGCCCCGAAACTG +
Preference number: 4 (lower is better)
Translates to: AGTFFSQRPFFSIRRSLSQVRLL*AAAPKL
Trigger: CAGTTTCGGGGCTGCGGCTCACAGAAGTCTAACCTG...AGACAGTGACCTTCGAATACTGAAGAAAGGTCTTTGTGAGAAGAAAGTCCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR TCA 90 bp ACACTTCTTTGTATTCAGTTCTCTGTTAGAGCCTCTGGTGTGATGTTTGGGCCCTTAGAGCCTCTGGTGTaGTGTTTGGGCCCTGACTGG +
Preference number: 4 (lower is better)
Translates to: TLLCIQFSVRASGVMFGPLEPLV*CLGPDW
Trigger: CCAGTCAGGGCCCAAACATCACACCAGAGGCTCTAA...GGGCCCAAACATCACACCAGAGGCTCTAACAGAGAACTGAATACAAAGAAGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000511283.2
CDS-3UTR TCA 90 bp CAAGGAACACTTCTTTGTATTCAGTTCTCTGTTAGAGCCTCTGGTGTGATGTTTCCACTGCCCAGAAGCTaGTGGTGGCAGTGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: QGTLLCIQFSVRASGVMFPLPRS*WWQWLA
Trigger: TGCCAGCCACTGCCACCATCAGCTTCTGGGCAGTGG...AAACATCACACCAGAGGCTCTAACAGAGAACTGAATACAAAGAAGTGTTCCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR GCA 90 bp CATCTTCCGCACCTCTTCTACCACTCTCCGCACGAACTCATCATGAATGGAGTCCAAAGCCTGGTATTTTaGCACCACATCAGGCAAAGC +
Preference number: 4 (lower is better)
Translates to: HLPHLFYHSPHELIMNGVQSLVF*HHIRQS
Trigger: GCTTTGCCTGATGTGGTGGCAAAATACCAGGCTTTG...GACTCCATTCATGATGAGTTCGTGCGGAGAGTGGTAGAAGAGGTGCGGAAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR GCA 90 bp GCACTGATTATCTCCATGGGGATGAATTGGCTGCAGAAGGGCAGGACGTTGAGCGTCCCCAAAGGTGGATaGCATGTACACATCTTCATT +
Preference number: 4 (lower is better)
Translates to: ALIISMGMNWLQKGRTLSVPKGG*HVHIFI
Trigger: AATGAAGATGTGTACATGGCATCCACCTTTGGGGAC...GCTCAACGTCCTGCCCTTCTGCAGCCAATTCATCCCCATGGAGATAATCAGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR GCA 90 bp GACCTTTCTTCAGTATTCGAAGGTCACTGTCTTGACCCGCAGGTACTCGTTCAGTTTCCACGTAGTCAATaGTGCACTCGCCCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: DLSSVFEGHCLDPQVLVQFPRSQ*CTRPPH
Trigger: ATGAGGAGGGCGAGTGCAGCATTGACTACGTGGAAA...CTGAACGAGTACCTGCGGGTCAAGACAGTGACCTTCGAATACTGAAGAAAGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR GCA 90 bp GGGCTCTCTGCCTTCCACTCTTCAATACCCAAGGAACACTTCTTTGTATTCAGTGGGGCATGCGGACAGTaGGCTTGTTCACTGCCATTT +
Preference number: 4 (lower is better)
Translates to: GLSAFHSSIPKEHFFVFSGACGQ*ACSLPF
Trigger: AAATGGCAGTGAACAAGCGCACTGTCCGCATGCCCC...ACTGAATACAAAGAAGTGTTCCTTGGGTATTGAAGAGTGGAAGGCAGAGAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR GCA 90 bp CTCATCATGAATGGAGTCCTCCACAAAGAGTCGGCCTGCTGCAATGCAATTCTCCCACACCTTTGGGAATaGCGGCCTTTAATGTCAGCT +
Preference number: 4 (lower is better)
Translates to: LIMNGVLHKESACCNAILPHLWE*RPLMSA
Trigger: AGCTGACATTAAAGGCCGGCATTCCCAAAGGTGTGG...GAGAATTGCATTGCAGCAGGCCGACTCTTTGTGGAGGACTCCATTCATGATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR GCA 90 bp CCACTCTTCAATACCCAAGGAACACTTCTTTGTATTCAGTTCTCTGTTAGAGCCCCAGACAGTGGCAGCTaGTTCCTGCAGTCGCTGTCC +
Preference number: 4 (lower is better)
Translates to: PLFNTQGTLLCIQFSVRAPDSGS*FLQSLS
Trigger: GGACAGCGACTGCAGGAAGCAGCTGCCACTGTCTGG...GGCTCTAACAGAGAACTGAATACAAAGAAGTGTTCCTTGGGTATTGAAGAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000511283.2
CDS-3UTR GCA 90 bp CAAGGAACACTTCTTTGTATTCAGTTCTCTGTTAGAGCCTCTGGTGTGATGTTTGGGAAGTGCTTTGTCTaGCTGGGAGGCCCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: QGTLLCIQFSVRASGVMFGKCFV*LGGPAC
Trigger: GCAGGCTGGGCCTCCCAGGCAGACAAAGCACTTCCC...AAACATCACACCAGAGGCTCTAACAGAGAACTGAATACAAAGAAGTGTTCCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR GCA 90 bp TCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTAATTCCGTCTCTGTCTaGACTTTGGGAAGATTCTTT +
Preference number: 4 (lower is better)
Translates to: SSEALFSLGGAHLTQPRANSVSV*TLGRFF
Trigger: AAAGAATCTTCCCAAAGTGCAGACAGAGACGGAATT...AGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472186.5
CDS-3UTR CCA 90 bp CCAATAACTTTGGGCTCTCTGCCTTCCACTCTTCAATACCCAAGGAACACTTCTGAATCCCCTCATAGGTaGCTCCTTCCTCAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: PITLGSLPSTLQYPRNTSESPHR*LLPQAE
Trigger: CTCAGCCTGAGGAAGGAGCCACCTATGAGGGGATTC...AGAAGTGTTCCTTGGGTATTGAAGAGTGGAAGGCAGAGAGCCCAAAGTTATTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR CCA 90 bp AATACCCAAGGAACACTTCTTTGTATTCAGTTCTCTGTTAGAGCCTCTGGTGTGTCTGTCACTCTGTCCTaGTGTCCAGGGGGTCGGCCT +
Preference number: 4 (lower is better)
Translates to: NTQGTLLCIQFSVRASGVSVTLS*CPGGRP
Trigger: AGGCCGACCCCCTGGACACCAGGACAGAGTGACAGA...CACACCAGAGGCTCTAACAGAGAACTGAATACAAAGAAGTGTTCCTTGGGTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000511283.2
CDS-3UTR CCA 90 bp AGGCCTGAAGTGTTCAGCGTTGAGTTGAAAAATGTCAGTTTCTGTTCACAGGCCCTCTGGTGTGATGTTTaGGCCCTGACTGGACTGGCT +
Preference number: 4 (lower is better)
Translates to: RPEVFSVELKNVSFCSQALWCDV*ALTGLA
Trigger: AGCCAGTCCAGTCAGGGCCCAAACATCACACCAGAG...GGCCTGTGAACAGAAACTGACATTTTTCAACTCAACGCTGAACACTTCAGGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR CCA 90 bp AATAACTTTGGGCTCTCTGCCTTCCACTCTTCAATACCCAAGGAACACTTCTTTGGACCCAGCTCCTCCTaGCAGGTAAAAGGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: NNFGLSAFHSSIPKEHFFGPSSS*QVKGPP
Trigger: TGGAGGCCCTTTTACCTGCCAGGAGGAGCTGGGTCC...AAAGAAGTGTTCCTTGGGTATTGAAGAGTGGAAGGCAGAGAGCCCAAAGTTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR TCA 90 bp CTCCTTGGCTATGAACATGTGGTCTTCCACGTCTGTGAAAACAGTTGGCTCAAACCTCTGTGGAGCCTGTaGACCCGATTTTCCTCACAT +
Preference number: 4 (lower is better)
Translates to: LLGYEHVVFHVCENSWLKPLWSL*TRFSSH
Trigger: ATGTGAGGAAAATCGGGTTCACAGGCTCCACAGAGG...TTTGAGCCAACTGTTTTCACAGACGTGGAAGACCACATGTTCATAGCCAAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR TCA 90 bp AATAACTTTGGGCTCTCTGCCTTCCACTCTTCAATACCCAAGGAACACTTCTTTGTGATGTTTGGGCCCTaGCTGGACTGGCTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: NNFGLSAFHSSIPKEHFFVMFGP*LDWLSS
Trigger: AGAGGAGAGCCAGTCCAGTCAGGGCCCAAACATCAC...AAAGAAGTGTTCCTTGGGTATTGAAGAGTGGAAGGCAGAGAGCCCAAAGTTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000511283.2
CDS-3UTR TCA 90 bp GCCTTCCACTCTTCAATACCCAAGGAACACTTCTTTGTATTCAGTTCTCTGTTATCCAGCCCAGGCTGGTaGGGGAAGTGCTTTGTCTGC +
Preference number: 4 (lower is better)
Translates to: AFHSSIPKEHFFVFSSLLSSPGW*GKCFVC
Trigger: GCAGACAAAGCACTTCCCTCACCAGCCTGGGCTGGA...TAACAGAGAACTGAATACAAAGAAGTGTTCCTTGGGTATTGAAGAGTGGAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR CCA 90 bp GCCTTCCACTCTTCAATACCCAAGGAACACTTCTTTGTATTCAGTTCTCTGTTAGGATCCAGTTGTGAATaGCCTCTGCCGGCTGGTCCC +
Preference number: 4 (lower is better)
Translates to: AFHSSIPKEHFFVFSSLLGSSCE*PLPAGP
Trigger: GGGACCAGCCGGCAGAGGCCATTCACAACTGGATCC...TAACAGAGAACTGAATACAAAGAAGTGTTCCTTGGGTATTGAAGAGTGGAAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR CCA 90 bp ACAAACACAGTGCCTGCCTGGAGCTTGTCACTGACATACAGGGCCTTGTTGATGCGAACTCATCATGAATaGAGTCCTCCACAAAGAGTC +
Preference number: 4 (lower is better)
Translates to: TNTVPAWSLSLTYRALLMRTHHE*SPPQRV
Trigger: GACTCTTTGTGGAGGACTCCATTCATGATGAGTTCG...CATCAACAAGGCCCTGTATGTCAGTGACAAGCTCCAGGCAGGCACTGTGTTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp CACTCTTCAATACCCAAGGAACACTTCTTTGTATTCAGTTCTCTGTTAGAGCCTTGTTTGGGCCCTGACTaGACTGGCTCTCCTCTCCGG +
Preference number: 4 (lower is better)
Translates to: HSSIPKEHFFVFSSLLEPCLGPD*TGSPLR
Trigger: CCGGAGAGGAGAGCCAGTCCAGTCAGGGCCCAAACA...AGGCTCTAACAGAGAACTGAATACAAAGAAGTGTTCCTTGGGTATTGAAGAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000511283.2
3UTR CAA 72 bp TTCACGTTACTTATGGCACAGCTTTTCATGATGTGCTaGCCCACCTCTGTGGAGCCTGTGAACCCGATTTTC +
Preference number: 4 (lower is better)
Translates to: FTLLMAQLFMMC*PTSVEPVNPIF
Trigger: GAAAATCGGGTTCACAGGCTCCACAGAGGTGGGCAAGCACATCATGAAAAGCTGTGCCATAAGTAACGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455064.6
CDS-3UTR TCA 90 bp GCAGGGACTTTCTTCTCACAAAGACCTTTCTTCAGTATTCGAAGGTCACTGTCTCTCATCCCCTTTTCATaGTGTGCTTGCCCACCTCTG +
Preference number: 4 (lower is better)
Translates to: AGTFFSQRPFFSIRRSLSLIPFS*CACPPL
Trigger: CAGAGGTGGGCAAGCACATCATGAAAAGGGGATGAG...AGACAGTGACCTTCGAATACTGAAGAAAGGTCTTTGTGAGAAGAAAGTCCCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393431.6
CDS-3UTR GCA 90 bp AGGGGCAGGGACTTTCTTCTCACAAAGACCTTTCTTCAGTATTCGAAGGTCACTGAACTCATCCCCATCTaGACAGCCTTGTTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: RGRDFLLTKTFLQYSKVTELIPI*TALLRS
Trigger: TGACCTCAACAAGGCTGTGCAGATGGGGATGAGTTC...AGTGACCTTCGAATACTGAAGAAAGGTCTTTGTGAGAAGAAAGTCCCTGCCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455064.6
CDS-3UTR CCA 90 bp AGGGGCAGGGACTTTCTTCTCACAAAGACCTTTCTTCAGTATTCGAAGGTCACTAACACAGTGCCTGCCTaGAGCTTGTCACTGACATAC +
Preference number: 4 (lower is better)
Translates to: RGRDFLLTKTFLQYSKVTNTVPA*SLSLTY
Trigger: GTATGTCAGTGACAAGCTCCAGGCAGGCACTGTGTT...AGTGACCTTCGAATACTGAAGAAAGGTCTTTGTGAGAAGAAAGTCCCTGCCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp CCACTCTTCAATACCCAAGGAACACTTCTTTGTATTCAGTTCTCTGTTAGAGCCTCAGCTTCCAGACAGTaGCAGCTGCTTCCTGCAGTC +
Preference number: 4 (lower is better)
Translates to: PLFNTQGTLLCIQFSVRASASRQ*QLLPAV
Trigger: GACTGCAGGAAGCAGCTGCCACTGTCTGGAAGCTGA...GGCTCTAACAGAGAACTGAATACAAAGAAGTGTTCCTTGGGTATTGAAGAGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000511283.2
CDS-3UTR CCA 90 bp GCCTTCCACTCTTCAATACCCAAGGAACACTTCTTTGTATTCAGTTCTCTGTTAGATGGTGGCAGTGGCTaGCAGGTACATGTTGGGCTC +
Preference number: 4 (lower is better)
Translates to: AFHSSIPKEHFFVFSSLLDGGSG*QVHVGL
Trigger: GAGCCCAACATGTACCTGCCAGCCACTGCCACCATC...TAACAGAGAACTGAATACAAAGAAGTGTTCCTTGGGTATTGAAGAGTGGAAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR CCA 90 bp CTGTCCCCAATAACTTTGGGCTCTCTGCCTTCCACTCTTCAATACCCAAGGAACGAACGATTCACAAATTaGGCAGCCCTCAGAATCACA +
Preference number: 4 (lower is better)
Translates to: LSPITLGSLPSTLQYPRNERFTN*AALRIT
Trigger: TGTGATTCTGAGGGCTGCCCAATTTGTGAATCGTTC...GTTCCTTGGGTATTGAAGAGTGGAAGGCAGAGAGCCCAAAGTTATTGGGGACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511283.2
CDS-3UTR TCA 90 bp CGTGTTGACAAACACAGTGCCTGCCTGGAGCTTGTCACTGACATACAGGGCCTTTGTTCAGCGTTGAGTTaGAAAATGTCAGTTTCTGTT +
Preference number: 4 (lower is better)
Translates to: RVDKHSACLELVTDIQGLCSALS*KMSVSV
Trigger: AACAGAAACTGACATTTTTCAACTCAACGCTGAACA...AAGGCCCTGTATGTCAGTGACAAGCTCCAGGCAGGCACTGTGTTTGTCAACACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR TCA 90 bp TTGGGCTCTCTGCCTTCCACTCTTCAATACCCAAGGAACACTTCTTTGTATTCACTGAGCCCACTCTGCTaGAATGTCTCCTGTTTCTCA +
Preference number: 4 (lower is better)
Translates to: LGSLPSTLQYPRNTSLYSLSPLC*NVSCFS
Trigger: TGAGAAACAGGAGACATTTCAGCAGAGTGGGCTCAG...TGAATACAAAGAAGTGTTCCTTGGGTATTGAAGAGTGGAAGGCAGAGAGCCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR GCA 90 bp CCACTCTTCAATACCCAAGGAACACTTCTTTGTATTCAGTTCTCTGTTAGAGCCAAAGAGGATGAGTCCTaGTTTGGTGACCACCCCTGG +
Preference number: 4 (lower is better)
Translates to: PLFNTQGTLLCIQFSVRAKEDES*FGDHPW
Trigger: CCAGGGGTGGTCACCAAAGCAGGACTCATCCTCTTT...GGCTCTAACAGAGAACTGAATACAAAGAAGTGTTCCTTGGGTATTGAAGAGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR CCA 90 bp TTCAATACCCAAGGAACACTTCTTTGTATTCAGTTCTCTGTTAGAGCCTCTGGTCTCTGGTGTGATGTTTaGGCCCTGACTGGACTGGCT +
Preference number: 4 (lower is better)
Translates to: FNTQGTLLCIQFSVRASGLWCDV*ALTGLA
Trigger: AGCCAGTCCAGTCAGGGCCCAAACATCACACCAGAG...ACCAGAGGCTCTAACAGAGAACTGAATACAAAGAAGTGTTCCTTGGGTATTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000511283.2
CDS-3UTR TCA 90 bp CACTCTTCAATACCCAAGGAACACTTCTTTGTATTCAGTTCTCTGTTAGAGCCTACGCGGCCCCTGACTTaGAGAAATCAGTGGAGTCTT +
Preference number: 4 (lower is better)
Translates to: HSSIPKEHFFVFSSLLEPTRPLT*RNQWSL
Trigger: AAGACTCCACTGATTTCTTCAAGTCAGGGGCCGCGT...AGGCTCTAACAGAGAACTGAATACAAAGAAGTGTTCCTTGGGTATTGAAGAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR GCA 90 bp ATAACTTTGGGCTCTCTGCCTTCCACTCTTCAATACCCAAGGAACACTTCTTTGGCTCTGTCCAATCACTaGAATCTTCATGGTAGCAGG +
Preference number: 4 (lower is better)
Translates to: ITLGSLPSTLQYPRNTSLALSNH*NLHGSR
Trigger: CCTGCTACCATGAAGATTGCAGTGATTGGACAGAGC...CAAAGAAGTGTTCCTTGGGTATTGAAGAGTGGAAGGCAGAGAGCCCAAAGTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000511283.2
CDS-3UTR GCA 90 bp AGGGGCAGGGACTTTCTTCTCACAAAGACCTTTCTTCAGTATTCGAAGGTCACTAGGCCAGGATCATTTTaGCATCCTCCAGCTGAATAT +
Preference number: 4 (lower is better)
Translates to: RGRDFLLTKTFLQYSKVTRPGSF*HPPAEY
Trigger: ATATTCAGCTGGAGGATGGCAAAATGATCCTGGCCT...AGTGACCTTCGAATACTGAAGAAAGGTCTTTGTGAGAAGAAAGTCCCTGCCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR GCA 90 bp AGGGGCAGGGACTTTCTTCTCACAAAGACCTTTCTTCAGTATTCGAAGGTCACTAGTGCGCTTGTTCACTaGCATTTCCACGTAGTCAAT +
Preference number: 4 (lower is better)
Translates to: RGRDFLLTKTFLQYSKVTSALVH*HFHVVN
Trigger: ATTGACTACGTGGAAATGGCAGTGAACAAGCGCACT...AGTGACCTTCGAATACTGAAGAAAGGTCTTTGTGAGAAGAAAGTCCCTGCCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR GCA 90 bp AATAACTTTGGGCTCTCTGCCTTCCACTCTTCAATACCCAAGGAACACTTCTTTGAGAGACTCCAGGGTTaGCTCGTGGACAGAACAAAT +
Preference number: 4 (lower is better)
Translates to: NNFGLSAFHSSIPKEHFFERLQG*LVDRTN
Trigger: ATTTGTTCTGTCCACGAGGCAACCCTGGAGTCTCTC...AAAGAAGTGTTCCTTGGGTATTGAAGAGTGGAAGGCAGAGAGCCCAAAGTTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511283.2
3UTR CAA 72 bp ACAAAGAGTCGGCCTGCTGCAATGCAATTCTCTCCTTaGTTGAAGAAAACAGAACTCATCCCCATCTGCACA +
Preference number: 4 (lower is better)
Translates to: TKSRPAAMQFSP*LKKTELIPICT
Trigger: TGTGCAGATGGGGATGAGTTCTGTTTTCTTCAACAAAGGAGAGAATTGCATTGCAGCAGGCCGACTCTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455064.6
CDS-3UTR TCA 90 bp TCTTCAATACCCAAGGAACACTTCTTTGTATTCAGTTCTCTGTTAGAGCCTCTGTTATCTCCATGGGGATaGATTGGCTGCAGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: SSIPKEHFFVFSSLLEPLLSPWG*IGCRRA
Trigger: TGCCCTTCTGCAGCCAATTCATCCCCATGGAGATAA...CAGAGGCTCTAACAGAGAACTGAATACAAAGAAGTGTTCCTTGGGTATTGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR TCA 90 bp CCACTCTTCAATACCCAAGGAACACTTCTTTGTATTCAGTTCTCTGTTAGAGCCCCTTTCTTATCTCCGTaGATGAGGGTCCAGTTGATG +
Preference number: 4 (lower is better)
Translates to: PLFNTQGTLLCIQFSVRAPFLSP*MRVQLM
Trigger: CATCAACTGGACCCTCATTCACGGAGATAAGAAAGG...GGCTCTAACAGAGAACTGAATACAAAGAAGTGTTCCTTGGGTATTGAAGAGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR GCA 90 bp AATACCCAAGGAACACTTCTTTGTATTCAGTTCTCTGTTAGAGCCTCTGGTGTGGCTCTGTCCAATCACTaGAATCTTCATGGTAGCAGG +
Preference number: 4 (lower is better)
Translates to: NTQGTLLCIQFSVRASGVALSNH*NLHGSR
Trigger: CCTGCTACCATGAAGATTGCAGTGATTGGACAGAGC...CACACCAGAGGCTCTAACAGAGAACTGAATACAAAGAAGTGTTCCTTGGGTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000511283.2
CDS-3UTR GCA 90 bp GCAGGGACTTTCTTCTCACAAAGACCTTTCTTCAGTATTCGAAGGTCACTGTCTGTCCCCAAAGGTGGATaGCATGTACACATCTTCATT +
Preference number: 4 (lower is better)
Translates to: AGTFFSQRPFFSIRRSLSVPKGG*HVHIFI
Trigger: AATGAAGATGTGTACATGGCATCCACCTTTGGGGAC...AGACAGTGACCTTCGAATACTGAAGAAAGGTCTTTGTGAGAAGAAAGTCCCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR GCA 90 bp CACTCTTCAATACCCAAGGAACACTTCTTTGTATTCAGTTCTCTGTTAGAGCCTGGGTTGGAAGGACCTTaGTTGTTCACTCAGTACTCC +
Preference number: 4 (lower is better)
Translates to: HSSIPKEHFFVFSSLLEPGLEGP*LFTQYS
Trigger: GGAGTACTGAGTGAACAAGCAAGGTCCTTCCAACCC...AGGCTCTAACAGAGAACTGAATACAAAGAAGTGTTCCTTGGGTATTGAAGAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511283.2
CDS-3UTR TCA 90 bp AGGCCTGAAGTGTTCAGCGTTGAGTTGAAAAATGTCAGTTTCTGTTCACAGGCCTGTTCAGCGTTGAGTTaGAAAATGTCAGTTTCTGTT +
Preference number: 4 (lower is better)
Translates to: RPEVFSVELKNVSFCSQACSALS*KMSVSV
Trigger: AACAGAAACTGACATTTTTCAACTCAACGCTGAACA...GGCCTGTGAACAGAAACTGACATTTTTCAACTCAACGCTGAACACTTCAGGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000493803.5
CDS-3UTR GCA 90 bp CAAGGAACACTTCTTTGTATTCAGTTCTCTGTTAGAGCCTCTGGTGTGATGTTTAGGCCAGGATCATTTTaGCATCCTCCAGCTGAATAT +
Preference number: 4 (lower is better)
Translates to: QGTLLCIQFSVRASGVMFRPGSF*HPPAEY
Trigger: ATATTCAGCTGGAGGATGGCAAAATGATCCTGGCCT...AAACATCACACCAGAGGCTCTAACAGAGAACTGAATACAAAGAAGTGTTCCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR TCA 90 bp CACTCTTCAATACCCAAGGAACACTTCTTTGTATTCAGTTCTCTGTTAGAGCCTTTTGGATCCCGCTTCTaGCACCATGTTAAAAGAAAA +
Preference number: 4 (lower is better)
Translates to: HSSIPKEHFFVFSSLLEPFGSRF*HHVKRK
Trigger: TTTTCTTTTAACATGGTGTCAGAAGCGGGATCCAAA...AGGCTCTAACAGAGAACTGAATACAAAGAAGTGTTCCTTGGGTATTGAAGAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511283.2
CDS CCA 90 bp GCGGGGCGGGCGGAGAGTCAGCCGAGTGGGGGCGGCGCTCACCGGTaGTGGGACTATGGCGGGAGCGCAGCGCACCCTCTCCGGGCGGGT +
Preference number: 5 (lower is better)
Translates to: AGRAESQPSGGGAHR*WDYGGSAAHPLRAG
Trigger: ACCCGCCCGGAGAGGGTGCGCTGCGCTCCCGCCATAGTCCCACCACCGGTGAGCGCCGCCCCCACTCGGCTGACTCTCCGCCCGCCCCGC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000455064.6
ENST00000460368.5
CDS CCA 90 bp GGGCGGGCGGAGAGTCAGCCGAGTGGGGGCGGCGCTCACCGGTGGTaGGACTATGGCGGGAGCGCAGCGCACCCTCTCCGGGCGGGTCTA +
Preference number: 5 (lower is better)
Translates to: GRAESQPSGGGAHRW*DYGGSAAHPLRAGL
Trigger: TAGACCCGCCCGGAGAGGGTGCGCTGCGCTCCCGCCATAGTCCCACCACCGGTGAGCGCCGCCCCCACTCGGCTGACTCTCCGCCCGCCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000455064.6
ENST00000460368.5
CDS GCA 90 bp GGGCCCCTCCTGCAGCTGTGGGCTCCGGCCCATAGCCTGCCACCCTaGCTCTCAGCAGTACCAGCTGCCCAGGTGACTGAGCCGCCCTGC +
Preference number: 5 (lower is better)
Translates to: GPLLQLWAPAHSLPP*LSAVPAAQVTEPPC
Trigger: GCAGGGCGGCTCAGTCACCTGGGCAGCTGGTACTGCTGAGAGGCAGGGTGGCAGGCTATGGGCCGGAGCCCACAGCTGCAGGAGGGGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413612.5
ENST00000476245.5
CDS CCA 90 bp TGCAGCCGCTTGCAGAGGCGGCCCCTTAGCAGCTGCGCATCCGGGTaGATAGCGGCGCTTCTGCCCGCCCAGTGCCTACCCGCCTCTCCG +
Preference number: 5 (lower is better)
Translates to: CSRLQRRPLSSCASG*IAALLPAQCLPASP
Trigger: CGGAGAGGCGGGTAGGCACTGGGCGGGCAGAAGCGCCGCTATCCACCCGGATGCGCAGCTGCTAAGGGGCCGCCTCTGCAAGCGGCTGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273450.7
CDS-3UTR CAA 90 bp GTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGGGCCCCAGGAGCCACGTaGTGGGGTCTGCTATCCGGC +
Preference number: 5 (lower is better)
Translates to: VGGAVHPGSRGRGPQPRGAPGAT*WGLLSG
Trigger: GCCGGATAGCAGACCCCACAACGTGGCTCCTGGGGC...CCCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000472186.5
CDS CCA 90 bp GGAGAGTCAGCCGAGTGGGGGCGGCGCTCACCGGTGGTGGGACTATaGCGGGAGCGCAGCGCACCCTCTCCGGGCGGGTCTATAAATGCC +
Preference number: 5 (lower is better)
Translates to: GESAEWGRRSPVVGL*RERSAPSPGGSINA
Trigger: GGCATTTATAGACCCGCCCGGAGAGGGTGCGCTGCGCTCCCGCCATAGTCCCACCACCGGTGAGCGCCGCCCCCACTCGGCTGACTCTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000455064.6
ENST00000460368.5
CDS-3UTR CAA 90 bp GGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGCTGCCCTCCGGGAATTaGCAGCCGCTTGCAGAGGCG +
Preference number: 5 (lower is better)
Translates to: GGRCCAPRLKREGAPATRLPSGN*QPLAEA
Trigger: CGCCTCTGCAAGCGGCTGCAAATTCCCGGAGGGCAG...CCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273450.7
CDS-3UTR CAA 90 bp GTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGGGGGAGTCTGGGGGCTTaGCCCTCAGCGATCAGCCTC +
Preference number: 5 (lower is better)
Translates to: VGGAVHPGSRGRGPQPRGGSLGA*PSAISL
Trigger: GAGGCTGATCGCTGAGGGCAAAGCCCCCAGACTCCC...CCCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCAC
70% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp AGGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGCAGGCTCCCGGCACCTaGTCGTTCCCGCGGATCCAG +
Preference number: 5 (lower is better)
Translates to: RWEVLCTQAQEGGGPSHEQAPGT*SFPRIQ
Trigger: CTGGATCCGCGGGAACGACAAGGTGCCGGGAGCCTG...CTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp GGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGGCTGCGGCCACTGCCTaGTCGACGTCGGTGACTTGG +
Preference number: 5 (lower is better)
Translates to: GGRCCAPRLKREGAPATRAAATA*STSVTW
Trigger: CCAAGTCACCGACGTCGACAAGGCAGTGGCCGCAGC...CCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS CCA 90 bp GAGAGGGCCGGAGCAGAACTCCATGCCACCCAGCAGGCAGAGCACTaGGGAGCCTGTGCTGTGTGCCGGGGGACCCCGCCTGCTATGTGC +
Preference number: 5 (lower is better)
Translates to: ERAGAELHATQQAEH*GACAVCRGTPPAMC
Trigger: GCACATAGCAGGCGGGGTCCCCCGGCACACAGCACAGGCTCCCCAGTGCTCTGCCTGCTGGGTGGCATGGAGTTCTGCTCCGGCCCTCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467370.5
CDS-3UTR CAA 90 bp AGGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGGGAGTCTGGGGGCTTaGCCCTCAGCGATCAGCCTC +
Preference number: 5 (lower is better)
Translates to: RWEVLCTQAQEGGGPSHEGSLGA*PSAISL
Trigger: GAGGCTGATCGCTGAGGGCAAAGCCCCCAGACTCCC...CTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp GGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGCTGGTCAAGGTCAGGTaGCGGTTGGGTCTGGCCTGG +
Preference number: 5 (lower is better)
Translates to: GGRCCAPRLKREGAPATRLVKVR*RLGLAW
Trigger: CCAGGCCAGACCCAACCGCAACCTGACCTTGACCAG...CCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp GTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGGATGGTAGCAGGAGGGTaGGAAGGACCGCGCGCAGGA +
Preference number: 5 (lower is better)
Translates to: VGGAVHPGSRGRGPQPRGMVAGG*EGPRAG
Trigger: TCCTGCGCGCGGTCCTTCCAACCCTCCTGCTACCAT...CCCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
CDS TCA 90 bp GCGCGCAGGAGTTGGTGCGGGCGTCCCGGGCAGGTTAGACTTCTGTaGGCCGCAGCCCCGAAACTGAGGTTGGTGCAGACCCGTCCTGGG +
Preference number: 5 (lower is better)
Translates to: ARRSWCGRPGQVRLL*AAAPKLRLVQTRPG
Trigger: CCCAGGACGGGTCTGCACCAACCTCAGTTTCGGGGCTGCGGCTCACAGAAGTCTAACCTGCCCGGGACGCCCGCACCAACTCCTGCGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000460368.5
ENST00000493803.5
CDS TCA 90 bp CCAGCAGCTCTGGCTGGCCCCAGGAGTGGCACTGCCCCGTCCCTCTaGGGTCCTGAGTCTGCCCAGGCAGGCTGCTTGGAAGGCTTGGCT +
Preference number: 5 (lower is better)
Translates to: PAALAGPRSGTAPSL*GPESAQAGCLEGLA
Trigger: AGCCAAGCCTTCCAAGCAGCCTGCCTGGGCAGACTCAGGACCTCAGAGGGACGGGGCAGTGCCACTCCTGGGGCCAGCCAGAGCTGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467370.5
CDS GCA 90 bp CCTCCGGGAATTTGCAGCCGCTTGCAGAGGCGGCCCCTTAGCAGCTaGGCATCCGGGTGGATAGCGGCGCTTCTGCCCGCCCAGTGCCTA +
Preference number: 5 (lower is better)
Translates to: PPGICSRLQRRPLSS*ASGWIAALLPAQCL
Trigger: TAGGCACTGGGCGGGCAGAAGCGCCGCTATCCACCCGGATGCGCAGCTGCTAAGGGGCCGCCTCTGCAAGCGGCTGCAAATTCCCGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273450.7
CDS-3UTR CAA 90 bp GGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGGGGAAGAGGAAGCGGTaGTACAGCGTGCTCACGGTG +
Preference number: 5 (lower is better)
Translates to: GGRCCAPRLKREGAPATRGKRKR*YSVLTV
Trigger: CACCGTGAGCACGCTGTACAACCGCTTCCTCTTCCC...CCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp GTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGGGGGAAGAGGAAGCGGTaGTACAGCGTGCTCACGGTG +
Preference number: 5 (lower is better)
Translates to: VGGAVHPGSRGRGPQPRGGKRKR*YSVLTV
Trigger: CACCGTGAGCACGCTGTACAACCGCTTCCTCTTCCC...CCCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCAC
68% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp GTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGGGCCGGCTGGTCCCAGTaGATCTTGGCTGTCTCCTTC +
Preference number: 5 (lower is better)
Translates to: VGGAVHPGSRGRGPQPRGAGWSQ*ILAVSF
Trigger: GAAGGAGACAGCCAAGATCAACTGGGACCAGCCGGC...CCCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp CCTGTACATCAGCCGGCCCCGGTCCCGCGCACTGATCTTCCCCCACCGTCCATTCAGGCTCCCGGCACCTaGTCGTTCCCGCGGATCCAG +
Preference number: 5 (lower is better)
Translates to: PVHQPAPVPRTDLPPPSIQAPGT*SFPRIQ
Trigger: CTGGATCCGCGGGAACGACAAGGTGCCGGGAGCCTG...AATGGACGGTGGGGGAAGATCAGTGCGCGGGACCGGGGCCGGCTGATGTACAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR CAA 90 bp AGGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGATGGTCTCAGAGGTCTaGGCGCCCTCGGCATCCACG +
Preference number: 5 (lower is better)
Translates to: RWEVLCTQAQEGGGPSHEMVSEV*APSAST
Trigger: CGTGGATGCCGAGGGCGCCAAGACCTCTGAGACCAT...CTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp AGGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGTCCCTGTCCAGCGGGTaGCCCACCTTCATCTTCCGC +
Preference number: 5 (lower is better)
Translates to: RWEVLCTQAQEGGGPSHESLSSG*PTFIFR
Trigger: GCGGAAGATGAAGGTGGGCAACCCGCTGGACAGGGA...CTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp GTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGGCCAAATTCCGTGGCATaGGCCCGAGACAGCACGGCA +
Preference number: 5 (lower is better)
Translates to: VGGAVHPGSRGRGPQPRGPNSVA*ARDSTA
Trigger: TGCCGTGCTGTCTCGGGCCAATGCCACGGAATTTGG...CCCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS TCA 90 bp GGCGTCCCGGGCAGGTTAGACTTCTGTGAGCCGCAGCCCCGAAACTaGGGTTGGTGCAGACCCGTCCTGGGAGCCAGGAGGTGGGACCTG +
Preference number: 5 (lower is better)
Translates to: GVPGRLDFCEPQPRN*GWCRPVLGARRWDL
Trigger: CAGGTCCCACCTCCTGGCTCCCAGGACGGGTCTGCACCAACCTCAGTTTCGGGGCTGCGGCTCACAGAAGTCTAACCTGCCCGGGACGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000460368.5
ENST00000493803.5
CDS CCA 90 bp GGCAAGCAGCCCTCACATATGATCCCCGGGCCCCTCCTGCAGCTGTaGGCTCCGGCCCATAGCCTGCCACCCTGCCTCTCAGCAGTACCA +
Preference number: 5 (lower is better)
Translates to: GKQPSHMIPGPLLQL*APAHSLPPCLSAVP
Trigger: TGGTACTGCTGAGAGGCAGGGTGGCAGGCTATGGGCCGGAGCCCACAGCTGCAGGAGGGGCCCGGGGATCATATGTGAGGGCTGCTTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413612.5
ENST00000476245.5
CDS-3UTR CAA 90 bp GTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGGGCAAAGCCTGTCCTTTaGCACGCCACCGGGAGTACT +
Preference number: 5 (lower is better)
Translates to: VGGAVHPGSRGRGPQPRGAKPVL*HATGST
Trigger: AGTACTCCCGGTGGCGTGCAAAAGGACAGGCTTTGC...CCCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp AGGCTCCCGGCACCTTGTCGTTCCCGCGGATCCAGTTGTGAATGGCCTCTGCCGCAGGCTCCCGGCACCTaGTCGTTCCCGCGGATCCAG +
Preference number: 5 (lower is better)
Translates to: RLPAPCRSRGSSCEWPLPQAPGT*SFPRIQ
Trigger: CTGGATCCGCGGGAACGACAAGGTGCCGGGAGCCTG...CGGCAGAGGCCATTCACAACTGGATCCGCGGGAACGACAAGGTGCCGGGAGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000493803.5
CDS-3UTR CAA 90 bp AGGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGAGGATGAGTCCTGCTTaGGTGACCACCCCTGGCCGA +
Preference number: 5 (lower is better)
Translates to: RWEVLCTQAQEGGGPSHERMSPA*VTTPGR
Trigger: TCGGCCAGGGGTGGTCACCAAAGCAGGACTCATCCT...CTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp GTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGGTCAACCTCCAGGACTTaGGGGAGGATCCGCTGCCAA +
Preference number: 5 (lower is better)
Translates to: VGGAVHPGSRGRGPQPRGSTSRT*GRIRCQ
Trigger: TTGGCAGCGGATCCTCCCCAAAGTCCTGGAGGTTGA...CCCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp GGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGGTGGAGCCCTGGATCTaGTCACACCAGCCAGCAAAG +
Preference number: 5 (lower is better)
Translates to: GGRCCAPRLKREGAPATRVEPWI*SHQPAK
Trigger: CTTTGCTGGCTGGTGTGACAAGATCCAGGGCTCCAC...CCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000472186.5
CDS TCA 90 bp GGGATGGTGGAGCCCTGTACATCAGCCGGCCCCGGTCCCGCGCACTaGTCTTCCCCCACCGTCCATTCTCAAAGGCATCCTTGGCTGCGG +
Preference number: 5 (lower is better)
Translates to: GMVEPCTSAGPGPAH*SSPTVHSQRHPWLR
Trigger: CCGCAGCCAAGGATGCCTTTGAGAATGGACGGTGGGGGAAGATCAGTGCGCGGGACCGGGGCCGGCTGATGTACAGGGCTCCACCATCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS GCA 90 bp CTACGGACACAGCAGAGCGAAAGGAGACGCTGCCCTCCGGGAATTTaGAGCCGCTTGCAGAGGCGGCCCCTTAGCAGCTGCGCATCCGGG +
Preference number: 5 (lower is better)
Translates to: LRTQQSERRRCPPGI*SRLQRRPLSSCASG
Trigger: CCCGGATGCGCAGCTGCTAAGGGGCCGCCTCTGCAAGCGGCTGCAAATTCCCGGAGGGCAGCGTCTCCTTTCGCTCTGCTGTGTCCGTAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273450.7
CDS CCA 90 bp CCCTCTGAGGTCCTGAGTCTGCCCAGGCAGGCTGCTTGGAAGGCTTaGCTTGTGGGCCTGTCCCAGGAGGGTGCTGGTCCTCTCAGCAGG +
Preference number: 5 (lower is better)
Translates to: PSEVLSLPRQAAWKA*LVGLSQEGAGPLSR
Trigger: CCTGCTGAGAGGACCAGCACCCTCCTGGGACAGGCCCACAAGCCAAGCCTTCCAAGCAGCCTGCCTGGGCAGACTCAGGACCTCAGAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467370.5
CDS-3UTR CAA 90 bp AGGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGCTCCATGGGGATGAATaGGCTGCAGAAGGGCAGGAC +
Preference number: 5 (lower is better)
Translates to: RWEVLCTQAQEGGGPSHELHGDE*AAEGQD
Trigger: GTCCTGCCCTTCTGCAGCCAATTCATCCCCATGGAG...CTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp GTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGGATGCGGACAGTGCGCTaGTTCACTGCCATTTCCACG +
Preference number: 5 (lower is better)
Translates to: VGGAVHPGSRGRGPQPRGMRTVR*FTAIST
Trigger: CGTGGAAATGGCAGTGAACAAGCGCACTGTCCGCAT...CCCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp AGGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGTTCTCAAAGGCATCCTaGGCTGCGGCCACTGCCTTG +
Preference number: 5 (lower is better)
Translates to: RWEVLCTQAQEGGGPSHEFSKAS*AAATAL
Trigger: CAAGGCAGTGGCCGCAGCCAAGGATGCCTTTGAGAA...CTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp GGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGCCCATCTGCACAGCCTaGTTGAGGTCACAGTCAGCA +
Preference number: 5 (lower is better)
Translates to: GGRCCAPRLKREGAPATRPICTA*LRSQSA
Trigger: TGCTGACTGTGACCTCAACAAGGCTGTGCAGATGGG...CCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp GTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGGGCGGCCACGTCGGTCTaGTTGTACGTGTTGACAAAC +
Preference number: 5 (lower is better)
Translates to: VGGAVHPGSRGRGPQPRGAATSV*LYVLTN
Trigger: GTTTGTCAACACGTACAACAAGACCGACGTGGCCGC...CCCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS TCA 90 bp GGGACCCCGCCTGCTATGTGCCGGTGGACCCCGCCTGCTGCCGCCTaGGTAACTTCACCTCTACTGGGAGACTTGCAACACCCGTGGTGT +
Preference number: 5 (lower is better)
Translates to: GTPPAMCRWTPPAAA*VTSPLLGDLQHPWC
Trigger: ACACCACGGGTGTTGCAAGTCTCCCAGTAGAGGTGAAGTTACTCAGGCGGCAGCAGGCGGGGTCCACCGGCACATAGCAGGCGGGGTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467370.5
CDS GCA 90 bp GGCATTGGGACCCCAGGTGGCAGGGACCTGGGTAGGCCCAAAGCATaGTTTGCTGCAAGAAGCAAGACCCGGCCAGTGCCTCCCCACTCC +
Preference number: 5 (lower is better)
Translates to: GIGTPGGRDLGRPKA*FAARSKTRPVPPHS
Trigger: GGAGTGGGGAGGCACTGGCCGGGTCTTGCTTCTTGCAGCAAAGCATGCTTTGGGCCTACCCAGGTCCCTGCCACCTGGGGTCCCAATGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467370.5
CDS GCA 90 bp CAGGGTGCTGTGAGCTCCCGCAGGCTGTGCTACAGTTCCGTGTACTaGATGGAAAGCACCGCGAGGCTGCACCTCGCCCTGGGCAGGAAC +
Preference number: 5 (lower is better)
Translates to: QGAVSSRRLCYSSVY*MESTARLHLALGRN
Trigger: GTTCCTGCCCAGGGCGAGGTGCAGCCTCGCGGTGCTTTCCATGCAGTACACGGAACTGTAGCACAGCCTGCGGGAGCTCACAGCACCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476245.5
CDS GCA 90 bp GGGTGCCCTGCTCAGACCCCTGTGGCTGGTGCCCTGTCCTCCAGCTaGAGCAAGGGCTGGATGATAACGGCCTGCACTGTCCCATCCTTG +
Preference number: 5 (lower is better)
Translates to: GCPAQTPVAGALSSS*SKGWMITACTVPSL
Trigger: CAAGGATGGGACAGTGCAGGCCGTTATCATCCAGCCCTTGCTGCAGCTGGAGGACAGGGCACCAGCCACAGGGGTCTGAGCAGGGCACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484724.5
CDS-3UTR CAA 90 bp CTCCAGCCCAGGCTGGTGAGGGAAGTGCTTTGTCTGCCTGGGAGGCCCAGCCTGCGCCACCGGGAGTACTaGAATACCGGCACTCCATCC +
Preference number: 5 (lower is better)
Translates to: LQPRLVREVLCLPGRPSLRHREY*NTGTPS
Trigger: GGATGGAGTGCCGGTATTCAAGTACTCCCGGTGGCG...CAGGCTGGGCCTCCCAGGCAGACAAAGCACTTCCCTCACCAGCCTGGGCTGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR CAA 90 bp CCGAGGGACCTGATTCCCGCCGCAGACCAGTGTGGCCCCTTCCTTCACGCCATGGGGAAGAGGAAGCGGTaGTACAGCGTGCTCACGGTG +
Preference number: 5 (lower is better)
Translates to: PRDLIPAADQCGPFLHAMGKRKR*YSVLTV
Trigger: CACCGTGAGCACGCTGTACAACCGCTTCCTCTTCCC...CATGGCGTGAAGGAAGGGGCCACACTGGTCTGCGGCGGGAATCAGGTCCCTCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CAA 90 bp ATCCTTGGCTGCGGCCACTGCCTTGTCGACGTCGGTGACTTGGGCCAGGGATACGGGAGTCTGGGGGCTTaGCCCTCAGCGATCAGCCTC +
Preference number: 5 (lower is better)
Translates to: ILGCGHCLVDVGDLGQGYGSLGA*PSAISL
Trigger: GAGGCTGATCGCTGAGGGCAAAGCCCCCAGACTCCC...GTATCCCTGGCCCAAGTCACCGACGTCGACAAGGCAGTGGCCGCAGCCAAGGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR CAA 90 bp AGGGAGTCTGGGGGCTTTGCCCTCAGCGATCAGCCTCACGGCCTGCACCATCCCGCCGGCTGGTCCCAGTaGATCTTGGCTGTCTCCTTC +
Preference number: 5 (lower is better)
Translates to: RESGGFALSDQPHGLHHPAGWSQ*ILAVSF
Trigger: GAAGGAGACAGCCAAGATCAACTGGGACCAGCCGGC...GGGATGGTGCAGGCCGTGAGGCTGATCGCTGAGGGCAAAGCCCCCAGACTCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000493803.5
CDS-3UTR CAA 90 bp AGGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGACGCGGCCCCTGACTaGAAGAAATCAGTGGAGTCT +
Preference number: 5 (lower is better)
Translates to: RWEVLCTQAQEGGGPSHEDAAPD*KKSVES
Trigger: AGACTCCACTGATTTCTTCAAGTCAGGGGCCGCGTC...CTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp AGGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGATGCGGACAGTGCGCTaGTTCACTGCCATTTCCACG +
Preference number: 5 (lower is better)
Translates to: RWEVLCTQAQEGGGPSHEMRTVR*FTAIST
Trigger: CGTGGAAATGGCAGTGAACAAGCGCACTGTCCGCAT...CTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp GGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGCTTTTCATGATGTGCTaGCCCACCTCTGTGGAGCCT +
Preference number: 5 (lower is better)
Translates to: GGRCCAPRLKREGAPATRLFMMC*PTSVEP
Trigger: AGGCTCCACAGAGGTGGGCAAGCACATCATGAAAAG...CCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp GTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGGCCGAAGGACTCCTCCTaGGCTATGAACATGTGGTCT +
Preference number: 5 (lower is better)
Translates to: VGGAVHPGSRGRGPQPRGPKDSS*AMNMWS
Trigger: AGACCACATGTTCATAGCCAAGGAGGAGTCCTTCGG...CCCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp CCCAAAGAGGATGAGTCCTGCTTTGGTGACCACCCCTGGCCGATGGGCTCCTGGGCCCCGAAACTGAGGTaGGTGCAGACCCGTCCTGGG +
Preference number: 5 (lower is better)
Translates to: PKEDESCFGDHPWPMGSWAPKLR*VQTRPG
Trigger: CCCAGGACGGGTCTGCACCAACCTCAGTTTCGGGGC...CCAGGAGCCCATCGGCCAGGGGTGGTCACCAAAGCAGGACTCATCCTCTTTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493803.5
CDS GCA 90 bp AGGACCTGCCATGTGCTACGGACACAGCAGAGCGAAAGGAGACGCTaGCCTCCGGGAATTTGCAGCCGCTTGCAGAGGCGGCCCCTTAGC +
Preference number: 5 (lower is better)
Translates to: RTCHVLRTQQSERRR*PPGICSRLQRRPLS
Trigger: GCTAAGGGGCCGCCTCTGCAAGCGGCTGCAAATTCCCGGAGGGCAGCGTCTCCTTTCGCTCTGCTGTGTCCGTAGCACATGGCAGGTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273450.7
CDS GCA 90 bp GGAGGCCGACAGGGACAGAGGAAGCAGGAGTGTCCAGCCTACACATaGGTGCATGTGAGTCCAGCCCTGTGGGCACACATGGGCCCCTCT +
Preference number: 5 (lower is better)
Translates to: GGRQGQRKQECPAYT*VHVSPALWAHMGPS
Trigger: AGAGGGGCCCATGTGTGCCCACAGGGCTGGACTCACATGCACGCATGTGTAGGCTGGACACTCCTGCTTCCTCTGTCCCTGTCGGCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467370.5
CDS GCA 90 bp GCAGGCTGCTTGGAAGGCTTGGCTTGTGGGCCTGTCCCAGGAGGGTaGTGGTCCTCTCAGCAGGACATGGGGACTAGGGTTAGGAGGGAG +
Preference number: 5 (lower is better)
Translates to: AGCLEGLACGPVPGG*WSSQQDMGTRVRRE
Trigger: CTCCCTCCTAACCCTAGTCCCCATGTCCTGCTGAGAGGACCAGCACCCTCCTGGGACAGGCCCACAAGCCAAGCCTTCCAAGCAGCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467370.5
CDS CCA 90 bp ACAGGCTCCTTCCTGGTCAAGGTCAGGTTGCGGTTGGGTCTGGCCTaGTTGATGGGGATGGTGGAGCCCTGTACATCAGCCGGCCCCGGT +
Preference number: 5 (lower is better)
Translates to: TGSFLVKVRLRLGLA*LMGMVEPCTSAGPG
Trigger: ACCGGGGCCGGCTGATGTACAGGGCTCCACCATCCCCATCAACCAGGCCAGACCCAACCGCAACCTGACCTTGACCAGGAAGGAGCCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS CCA 90 bp GGCTGCTTGGAAGGCTTGGCTTGTGGGCCTGTCCCAGGAGGGTGCTaGTCCTCTCAGCAGGACATGGGGACTAGGGTTAGGAGGGAGCTG +
Preference number: 5 (lower is better)
Translates to: GCLEGLACGPVPGGC*SSQQDMGTRVRREL
Trigger: CAGCTCCCTCCTAACCCTAGTCCCCATGTCCTGCTGAGAGGACCAGCACCCTCCTGGGACAGGCCCACAAGCCAAGCCTTCCAAGCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467370.5
CDS CCA 90 bp CCCAGCTCCCACCGCCTTGTCTGGACAGTGGGAAGCCCCTTCAGGTaGAAGGGGGTGGAGAGACTTGGCGTTACTGCCCAGACTCACTGG +
Preference number: 5 (lower is better)
Translates to: PSSHRLVWTVGSPFR*KGVERLGVTAQTHW
Trigger: CCAGTGAGTCTGGGCAGTAACGCCAAGTCTCTCCACCCCCTTCCACCTGAAGGGGCTTCCCACTGTCCAGACAAGGCGGTGGGAGCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467370.5
CDS CCA 90 bp AAGCACCCAGCAGGGCTGGCAGTTCTGAGCGCTGGCAAGGCTAAGTaGGTCAGAGGAGACCCTCGCCAAGCCGGTGACTCACTCACTCGC +
Preference number: 5 (lower is better)
Translates to: KHPAGLAVLSAGKAK*VRGDPRQAGDSLTR
Trigger: GCGAGTGAGTGAGTCACCGGCTTGGCGAGGGTCTCCTCTGACCCACTTAGCCTTGCCAGCGCTCAGAACTGCCAGCCCTGCTGGGTGCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488356.5
CDS CCA 90 bp TCTGGTAGGCCGGACACAGCAACACGGCTGGGGGTACCACGCCCATaGGGTTTGTCCGGACCCTGTCAGTGTGTGGGAAGATCCCTGCCT +
Preference number: 5 (lower is better)
Translates to: SGRPDTATRLGVPRP*GLSGPCQCVGRSLP
Trigger: AGGCAGGGATCTTCCCACACACTGACAGGGTCCGGACAAACCCCATGGGCGTGGTACCCCCAGCCGTGTTGCTGTGTCCGGCCTACCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484724.5
CDS CCA 90 bp ATACTGCCACGCCTCACTCTGGTAGGCCGGACACAGCAACACGGCTaGGGGTACCACGCCCATGGGGTTTGTCCGGACCCTGTCAGTGTG +
Preference number: 5 (lower is better)
Translates to: ILPRLTLVGRTQQHG*GYHAHGVCPDPVSV
Trigger: CACACTGACAGGGTCCGGACAAACCCCATGGGCGTGGTACCCCCAGCCGTGTTGCTGTGTCCGGCCTACCAGAGTGAGGCGTGGCAGTAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484724.5
CDS-3UTR CAA 90 bp GTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGGCCAAAGCCTGGTATTTaGCCACCACATCAGGCAAAG +
Preference number: 5 (lower is better)
Translates to: VGGAVHPGSRGRGPQPRGPKPGI*PPHQAK
Trigger: CTTTGCCTGATGTGGTGGCAAAATACCAGGCTTTGG...CCCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp GCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGCAGGCTCCCGGCACCTaGTCGTTCCCGCGGATCCAG +
Preference number: 5 (lower is better)
Translates to: AASDWTEGVQDADMVCRQQAPGT*SFPRIQ
Trigger: CTGGATCCGCGGGAACGACAAGGTGCCGGGAGCCTG...CTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp TCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTCAGGCTCCCGGCACCTaGTCGTTCCCGCGGATCCAG +
Preference number: 5 (lower is better)
Translates to: SEALFSLGGAHLTQPRAAQAPGT*SFPRIQ
Trigger: CTGGATCCGCGGGAACGACAAGGTGCCGGGAGCCTG...AGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp AGGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGCTTCCATCGGTGGGATaGATGGTCTCAGAGGTCTTG +
Preference number: 5 (lower is better)
Translates to: RWEVLCTQAQEGGGPSHELPSVG*MVSEVL
Trigger: CAAGACCTCTGAGACCATCAATCCCACCGATGGAAG...CTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp TTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGACTGGGCTGCGGCCACTGCCTaGTCGACGTCGGTGACTTGG +
Preference number: 5 (lower is better)
Translates to: LFSLGGAHLTQPRAASDWAAATA*STSVTW
Trigger: CCAAGTCACCGACGTCGACAAGGCAGTGGCCGCAGC...CCAGTCAGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp AGGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGCCGAAGGACTCCTCCTaGGCTATGAACATGTGGTCT +
Preference number: 5 (lower is better)
Translates to: RWEVLCTQAQEGGGPSHEPKDSS*AMNMWS
Trigger: AGACCACATGTTCATAGCCAAGGAGGAGTCCTTCGG...CTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp TTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGACTGGGCCCCGAAACTGAGGTaGGTGCAGACCCGTCCTGGG +
Preference number: 5 (lower is better)
Translates to: LFSLGGAHLTQPRAASDWAPKLR*VQTRPG
Trigger: CCCAGGACGGGTCTGCACCAACCTCAGTTTCGGGGC...CCAGTCAGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
CDS-3UTR CAA 90 bp GTTTCTGTTCACAGGCCTCTGTCCAGGCTCCCGGCACCTTGTCGTTCCCGCGGAATGGTAGCAGGAGGGTaGGAAGGACCGCGCGCAGGA +
Preference number: 5 (lower is better)
Translates to: VSVHRPLSRLPAPCRSRGMVAGG*EGPRAG
Trigger: TCCTGCGCGCGGTCCTTCCAACCCTCCTGCTACCAT...TCCGCGGGAACGACAAGGTGCCGGGAGCCTGGACAGAGGCCTGTGAACAGAAAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000493803.5
CDS-3UTR CAA 90 bp CCTGTACATCAGCCGGCCCCGGTCCCGCGCACTGATCTTCCCCCACCGTCCATTCTTTGGAAGCATCCCTaGGCTTCCGCACCTCCTCAC +
Preference number: 5 (lower is better)
Translates to: PVHQPAPVPRTDLPPPSILWKHP*ASAPPH
Trigger: GTGAGGAGGTGCGGAAGCCAAGGGATGCTTCCAAAG...AATGGACGGTGGGGGAAGATCAGTGCGCGGGACCGGGGCCGGCTGATGTACAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS GCA 90 bp AAAGGTCACAGCAGCTCCCACCACAGGCAGGGCACTGCTCGGGGCTaGAAGTGTCTTATTCCTCAGCAACCACGTGGGGGCAGCTCTGGC +
Preference number: 5 (lower is better)
Translates to: KGHSSSHHRQGTARG*KCLIPQQPRGGSSG
Trigger: GCCAGAGCTGCCCCCACGTGGTTGCTGAGGAATAAGACACTTGCAGCCCCGAGCAGTGCCCTGCCTGTGGTGGGAGCTGCTGTGACCTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467370.5
CDS CCA 90 bp GACCTGCTGAACCCTCAGCCAGAAACACGGGCCCCTGGGTCTTCATaGCCAACTCCTCCCTGCTATGCAGGTCTGGGTAGCACAGGTGCC +
Preference number: 5 (lower is better)
Translates to: DLLNPQPETRAPGSS*PTPPCYAGLGSTGA
Trigger: GGCACCTGTGCTACCCAGACCTGCATAGCAGGGAGGAGTTGGCCATGAAGACCCAGGGGCCCGTGTTTCTGGCTGAGGGTTCAGCAGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467370.5
CDS CCA 90 bp CAGGAGTGTCCAGCCTACACATGCGTGCATGTGAGTCCAGCCCTGTaGGCACACATGGGCCCCTCTCATGGGTACCCTTGGGGGCTTCTG +
Preference number: 5 (lower is better)
Translates to: QECPAYTCVHVSPAL*AHMGPSHGYPWGLL
Trigger: CAGAAGCCCCCAAGGGTACCCATGAGAGGGGCCCATGTGTGCCCACAGGGCTGGACTCACATGCACGCATGTGTAGGCTGGACACTCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467370.5
CDS CCA 90 bp GGGCTGCAAGTGTCTTATTCCTCAGCAACCACGTGGGGGCAGCTCTaGCTCACCCCACTTCCAGGTGAGAAGTCGAGGCCCAGCGAGGTC +
Preference number: 5 (lower is better)
Translates to: GLQVSYSSATTWGQL*LTPLPGEKSRPSEV
Trigger: GACCTCGCTGGGCCTCGACTTCTCACCTGGAAGTGGGGTGAGCCAGAGCTGCCCCCACGTGGTTGCTGAGGAATAAGACACTTGCAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467370.5
CDS-3UTR CAA 90 bp CCATCAGCTTCACAAGGTGGGCATGGTGATTCTGCGGCCCGTGGTCGGTGTCCCCGCCACCGGGAGTACTaGAATACCGGCACTCCATCC +
Preference number: 5 (lower is better)
Translates to: PSASQGGHGDSAARGRCPRHREY*NTGTPS
Trigger: GGATGGAGTGCCGGTATTCAAGTACTCCCGGTGGCG...GGGACACCGACCACGGGCCGCAGAATCACCATGCCCACCTTGTGAAGCTGATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CAA 90 bp TTCTGTTCACAGGCCTCTGTCCAGGCTCCCGGCACCTTGTCGTTCCCGCGGATCGGGAAGAGGAAGCGGTaGTACAGCGTGCTCACGGTG +
Preference number: 5 (lower is better)
Translates to: FCSQASVQAPGTLSFPRIGKRKR*YSVLTV
Trigger: CACCGTGAGCACGCTGTACAACCGCTTCCTCTTCCC...GATCCGCGGGAACGACAAGGTGCCGGGAGCCTGGACAGAGGCCTGTGAACAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000493803.5
CDS-3UTR CAA 90 bp CAGCCAAGGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGGGGAGTCTGGGGGCTTaGCCCTCAGCGATCAGCCTC +
Preference number: 5 (lower is better)
Translates to: QPRAASDWTEGVQDADMVGSLGA*PSAISL
Trigger: GAGGCTGATCGCTGAGGGCAAAGCCCCCAGACTCCC...CACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp TTCCCAAAGAGGATGAGTCCTGCTTTGGTGACCACCCCTGGCCGATGGGCTCCTGGGAGTCTGGGGGCTTaGCCCTCAGCGATCAGCCTC +
Preference number: 5 (lower is better)
Translates to: FPKRMSPALVTTPGRWAPGSLGA*PSAISL
Trigger: GAGGCTGATCGCTGAGGGCAAAGCCCCCAGACTCCC...AGGAGCCCATCGGCCAGGGGTGGTCACCAAAGCAGGACTCATCCTCTTTGGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000493803.5
CDS-3UTR CAA 90 bp TCACAGGCCTCTGTCCAGGCTCCCGGCACCTTGTCGTTCCCGCGGATCCAGTTGTCAACCTCCAGGACTTaGGGGAGGATCCGCTGCCAA +
Preference number: 5 (lower is better)
Translates to: SQASVQAPGTLSFPRIQLSTSRT*GRIRCQ
Trigger: TTGGCAGCGGATCCTCCCCAAAGTCCTGGAGGTTGA...CAACTGGATCCGCGGGAACGACAAGGTGCCGGGAGCCTGGACAGAGGCCTGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR CAA 90 bp CGGTGTCCCTGTCCAGCGGGTTGCCCACCTTCATCTTCCGCACCTCTTCTACCAATGGTCTCAGAGGTCTaGGCGCCCTCGGCATCCACG +
Preference number: 5 (lower is better)
Translates to: RCPCPAGCPPSSSAPLLPMVSEV*APSAST
Trigger: CGTGGATGCCGAGGGCGCCAAGACCTCTGAGACCAT...TGGTAGAAGAGGTGCGGAAGATGAAGGTGGGCAACCCGCTGGACAGGGACACCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CAA 90 bp TTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGACTGGGTCGACGTCGGTGACTaGGGCCAGGGATACCTGGCA +
Preference number: 5 (lower is better)
Translates to: LFSLGGAHLTQPRAASDWVDVGD*GQGYLA
Trigger: TGCCAGGTATCCCTGGCCCAAGTCACCGACGTCGAC...CCAGTCAGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp CTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGGGCTGCGGCCACTGCCTaGTCGACGTCGGTGACTTGG +
Preference number: 5 (lower is better)
Translates to: LLLTGQRASKMQTWCAGRAAATA*STSVTW
Trigger: CCAAGTCACCGACGTCGACAAGGCAGTGGCCGCAGC...CCTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp TCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTGCTGCGGCCACTGCCTaGTCGACGTCGGTGACTTGG +
Preference number: 5 (lower is better)
Translates to: SEALFSLGGAHLTQPRAAAAATA*STSVTW
Trigger: CCAAGTCACCGACGTCGACAAGGCAGTGGCCGCAGC...AGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp GGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCCTGGTCAAGGTCAGGTaGCGGTTGGGTCTGGCCTGG +
Preference number: 5 (lower is better)
Translates to: GLLLTGQRASKMQTWCAGLVKVR*RLGLAW
Trigger: CCAGGCCAGACCCAACCGCAACCTGACCTTGACCAG...GCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp GGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGACGTTAACCACACCTTaGGGAATGCCGGCCTTTAAT +
Preference number: 5 (lower is better)
Translates to: GGRCCAPRLKREGAPATRTLTTP*GMPAFN
Trigger: ATTAAAGGCCGGCATTCCCAAAGGTGTGGTTAACGT...CCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp AGGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGATCTGCACAGCCTTGTaGAGGTCACAGTCAGCAAAG +
Preference number: 5 (lower is better)
Translates to: RWEVLCTQAQEGGGPSHEICTAL*RSQSAK
Trigger: CTTTGCTGACTGTGACCTCAACAAGGCTGTGCAGAT...CTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp GGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCTCCCTGTCCAGCGGGTaGCCCACCTTCATCTTCCGC +
Preference number: 5 (lower is better)
Translates to: GLLLTGQRASKMQTWCAGSLSSG*PTFIFR
Trigger: GCGGAAGATGAAGGTGGGCAACCCGCTGGACAGGGA...GCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp CCATCAGCTTCACAAGGTGGGCATGGTGATTCTGCGGCCCGTGGTCGGTGTCCCCCAAATTCCGTGGCATaGGCCCGAGACAGCACGGCA +
Preference number: 5 (lower is better)
Translates to: PSASQGGHGDSAARGRCPPNSVA*ARDSTA
Trigger: TGCCGTGCTGTCTCGGGCCAATGCCACGGAATTTGG...GGGACACCGACCACGGGCCGCAGAATCACCATGCCCACCTTGTGAAGCTGATGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CAA 90 bp AGGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGCCACGTCGGTCTTGTaGTACGTGTTGACAAACACA +
Preference number: 5 (lower is better)
Translates to: RWEVLCTQAQEGGGPSHEATSVL*YVLTNT
Trigger: TGTGTTTGTCAACACGTACAACAAGACCGACGTGGC...CTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp GAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGCCCCGAAACTGAGGTaGGTGCAGACCCGTCCTGGG +
Preference number: 5 (lower is better)
Translates to: EALFSLGGAHLTQPRAASAPKLR*VQTRPG
Trigger: CCCAGGACGGGTCTGCACCAACCTCAGTTTCGGGGC...AGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
CDS-3UTR CAA 90 bp GCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGGCCCCGAAACTGAGGTaGGTGCAGACCCGTCCTGGG +
Preference number: 5 (lower is better)
Translates to: AASDWTEGVQDADMVCRQAPKLR*VQTRPG
Trigger: CCCAGGACGGGTCTGCACCAACCTCAGTTTCGGGGC...CTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
CDS-3UTR CAA 90 bp GGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGGTCTCTGTCTGCACTTaGGGAAGATTCTTTCCTCTC +
Preference number: 5 (lower is better)
Translates to: GGRCCAPRLKREGAPATRVSVCT*GRFFPL
Trigger: GAGAGGAAAGAATCTTCCCAAAGTGCAGACAGAGAC...CCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472186.5
CDS TCA 90 bp AGGGACAGAGGAAGCAGGAGTGTCCAGCCTACACATGCGTGCATGTaGGTCCAGCCCTGTGGGCACACATGGGCCCCTCTCATGGGTACC +
Preference number: 5 (lower is better)
Translates to: RDRGSRSVQPTHACM*VQPCGHTWAPLMGT
Trigger: GGTACCCATGAGAGGGGCCCATGTGTGCCCACAGGGCTGGACTCACATGCACGCATGTGTAGGCTGGACACTCCTGCTTCCTCTGTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467370.5
CDS TCA 90 bp GCGCCCGGCCAAAAGGAAGGATTTCACAGTTCCTGTGGTCGGACCTaGGGCAGTGATGAAGGTGTCCCACAAGGGGTGCTGTGCTGGGCG +
Preference number: 5 (lower is better)
Translates to: APGQKEGFHSSCGRT*GSDEGVPQGVLCWA
Trigger: CGCCCAGCACAGCACCCCTTGTGGGACACCTTCATCACTGCCTCAGGTCCGACCACAGGAACTGTGAAATCCTTCCTTTTGGCCGGGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476245.5
CDS CCA 90 bp GTGACTTCCCGCCCAGTTCCAGGGACACCTTCTTCACGTTACTTATaGCACAGCTGCAAGGAACAGAGGGCTGGTGGGGCCGGTCCCTCC +
Preference number: 5 (lower is better)
Translates to: VTSRPVPGTPSSRYL*HSCKEQRAGGAGPS
Trigger: GGAGGGACCGGCCCCACCAGCCCTCTGTTCCTTGCAGCTGTGCCATAAGTAACGTGAAGAAGGTGTCCCTGGAACTGGGCGGGAAGTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467370.5
CDS CCA 90 bp ATGGGACAACCAAAACCATGTGCAGACCTTGCCCGATGTCCTCTGTaGGGACCCTGGAGGCGATGCCTCCACCTGCAGCCTGGCTCCTCT +
Preference number: 5 (lower is better)
Translates to: MGQPKPCADLARCPL*GPWRRCLHLQPGSS
Trigger: AGAGGAGCCAGGCTGCAGGTGGAGGCATCGCCTCCAGGGTCCCCACAGAGGACATCGGGCAAGGTCTGCACATGGTTTTGGTTGTCCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476245.5
CDS-3UTR CAA 90 bp GCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGGGAATTTGCAGCCGCTaGCAGAGGCGGCCCCTTAGC +
Preference number: 5 (lower is better)
Translates to: AASDWTEGVQDADMVCRQGICSR*QRRPLS
Trigger: GCTAAGGGGCCGCCTCTGCAAGCGGCTGCAAATTCC...CTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273450.7
CDS-3UTR CAA 90 bp GGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCCGCCACCGGGAGTACTaGAATACCGGCACTCCATCC +
Preference number: 5 (lower is better)
Translates to: GLLLTGQRASKMQTWCAGRHREY*NTGTPS
Trigger: GGATGGAGTGCCGGTATTCAAGTACTCCCGGTGGCG...GCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp ATCACCACTGTGTTCCCGGCAGCCAGGCAGGCAGCTGTCTTCCAGGACAGCATCGCCGGCTGGTCCCAGTaGATCTTGGCTGTCTCCTTC +
Preference number: 5 (lower is better)
Translates to: ITTVFPAARQAAVFQDSIAGWSQ*ILAVSF
Trigger: GAAGGAGACAGCCAAGATCAACTGGGACCAGCCGGC...GATGCTGTCCTGGAAGACAGCTGCCTGCCTGGCTGCCGGGAACACAGTGGTGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CAA 90 bp TTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGACTGGGCCGGCTGGTCCCAGTaGATCTTGGCTGTCTCCTTC +
Preference number: 5 (lower is better)
Translates to: LFSLGGAHLTQPRAASDWAGWSQ*ILAVSF
Trigger: GAAGGAGACAGCCAAGATCAACTGGGACCAGCCGGC...CCAGTCAGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp ATTCCCGCCGCAGACCAGTGTGGCCCCTTCCTTCACGCCATGCTGGCAGTACTCTCAACCTCCAGGACTTaGGGGAGGATCCGCTGCCAA +
Preference number: 5 (lower is better)
Translates to: IPAADQCGPFLHAMLAVLSTSRT*GRIRCQ
Trigger: TTGGCAGCGGATCCTCCCCAAAGTCCTGGAGGTTGA...GAGTACTGCCAGCATGGCGTGAAGGAAGGGGCCACACTGGTCTGCGGCGGGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CAA 90 bp GAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTATGGTCTCAGAGGTCTaGGCGCCCTCGGCATCCACG +
Preference number: 5 (lower is better)
Translates to: EALFSLGGAHLTQPRAASMVSEV*APSAST
Trigger: CGTGGATGCCGAGGGCGCCAAGACCTCTGAGACCAT...AGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp GCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGATGGTCTCAGAGGTCTaGGCGCCCTCGGCATCCACG +
Preference number: 5 (lower is better)
Translates to: AASDWTEGVQDADMVCRQMVSEV*APSAST
Trigger: CGTGGATGCCGAGGGCGCCAAGACCTCTGAGACCAT...CTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp CCGAGGGACCTGATTCCCGCCGCAGACCAGTGTGGCCCCTTCCTTCACGCCATGCTTCCATCGGTGGGATaGATGGTCTCAGAGGTCTTG +
Preference number: 5 (lower is better)
Translates to: PRDLIPAADQCGPFLHAMLPSVG*MVSEVL
Trigger: CAAGACCTCTGAGACCATCAATCCCACCGATGGAAG...CATGGCGTGAAGGAAGGGGCCACACTGGTCTGCGGCGGGAATCAGGTCCCTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CAA 90 bp TTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCGTCGACGTCGGTGACTaGGGCCAGGGATACCTGGCA +
Preference number: 5 (lower is better)
Translates to: FRSFILPGRGTPHPAKGCVDVGD*GQGYLA
Trigger: TGCCAGGTATCCCTGGCCCAAGTCACCGACGTCGAC...GCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp CTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGGGTCGACGTCGGTGACTaGGGCCAGGGATACCTGGCA +
Preference number: 5 (lower is better)
Translates to: LLLTGQRASKMQTWCAGRVDVGD*GQGYLA
Trigger: TGCCAGGTATCCCTGGCCCAAGTCACCGACGTCGAC...CCTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp CCAAATTCCGTGGCATTGGCCCGAGACAGCACGGCATCCAAGTCCCCATCAGCAGTCGACGTCGGTGACTaGGGCCAGGGATACCTGGCA +
Preference number: 5 (lower is better)
Translates to: PNSVALARDSTASKSPSAVDVGD*GQGYLA
Trigger: TGCCAGGTATCCCTGGCCCAAGTCACCGACGTCGAC...TGCTGATGGGGACTTGGATGCCGTGCTGTCTCGGGCCAATGCCACGGAATTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CAA 90 bp GAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGTCGACGTCGGTGACTaGGGCCAGGGATACCTGGCA +
Preference number: 5 (lower is better)
Translates to: EALFSLGGAHLTQPRAASVDVGD*GQGYLA
Trigger: TGCCAGGTATCCCTGGCCCAAGTCACCGACGTCGAC...AGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp TTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCCTGGTCAAGGTCAGGTaGCGGTTGGGTCTGGCCTGG +
Preference number: 5 (lower is better)
Translates to: FRSFILPGRGTPHPAKGCLVKVR*RLGLAW
Trigger: CCAGGCCAGACCCAACCGCAACCTGACCTTGACCAG...GCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp GAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTCTGGTCAAGGTCAGGTaGCGGTTGGGTCTGGCCTGG +
Preference number: 5 (lower is better)
Translates to: EALFSLGGAHLTQPRAASLVKVR*RLGLAW
Trigger: CCAGGCCAGACCCAACCGCAACCTGACCTTGACCAG...AGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp CCAAATTCCGTGGCATTGGCCCGAGACAGCACGGCATCCAAGTCCCCATCAGCATCCCTGTCCAGCGGGTaGCCCACCTTCATCTTCCGC +
Preference number: 5 (lower is better)
Translates to: PNSVALARDSTASKSPSASLSSG*PTFIFR
Trigger: GCGGAAGATGAAGGTGGGCAACCCGCTGGACAGGGA...TGCTGATGGGGACTTGGATGCCGTGCTGTCTCGGGCCAATGCCACGGAATTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CAA 90 bp CAGCCAAGGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTCCCTGTCCAGCGGGTaGCCCACCTTCATCTTCCGC +
Preference number: 5 (lower is better)
Translates to: QPRAASDWTEGVQDADMVSLSSG*PTFIFR
Trigger: GCGGAAGATGAAGGTGGGCAACCCGCTGGACAGGGA...CACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp TTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGACTGGCCAAATTCCGTGGCATaGGCCCGAGACAGCACGGCA +
Preference number: 5 (lower is better)
Translates to: LFSLGGAHLTQPRAASDWPNSVA*ARDSTA
Trigger: TGCCGTGCTGTCTCGGGCCAATGCCACGGAATTTGG...CCAGTCAGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp GGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCGTGCCTGCCTGGAGCTaGTCACTGACATACAGGGCC +
Preference number: 5 (lower is better)
Translates to: GLLLTGQRASKMQTWCAGVPAWS*SLTYRA
Trigger: GGCCCTGTATGTCAGTGACAAGCTCCAGGCAGGCAC...GCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp ACACTCCGCACAGCCTCCGCAGTAACCAGCTCTGCCTCTGTCAGCTCAAGGACAATGGTAGCAGGAGGGTaGGAAGGACCGCGCGCAGGA +
Preference number: 5 (lower is better)
Translates to: TLRTASAVTSSASVSSRTMVAGG*EGPRAG
Trigger: TCCTGCGCGCGGTCCTTCCAACCCTCCTGCTACCAT...TGTCCTTGAGCTGACAGAGGCAGAGCTGGTTACTGCGGAGGCTGTGCGGAGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS GCA 90 bp CATGGTGATTCTGCGGCCCGTGGTCGGTGTCCCTGTCCAGCGGGTTaGCCACCTTCATCTTCCGCACCTCTTCTACCTGCAGAAAGTCCT +
Preference number: 5 (lower is better)
Translates to: HGDSAARGRCPCPAG*PPSSSAPLLPAESP
Trigger: AGGACTTTCTGCAGGTAGAAGAGGTGCGGAAGATGAAGGTGGGCAACCCGCTGGACAGGGACACCGACCACGGGCCGCAGAATCACCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462808.1
CDS CCA 90 bp ACAGGCTCCTTCCTGGTCAAGGTCAGGTTGCGGTTGGGTCTGGCCTaGTTGATGGGGATGGTGGAGCCCTGGATCTTGTCACACCAGCCA +
Preference number: 5 (lower is better)
Translates to: TGSFLVKVRLRLGLA*LMGMVEPWILSHQP
Trigger: TGGCTGGTGTGACAAGATCCAGGGCTCCACCATCCCCATCAACCAGGCCAGACCCAACCGCAACCTGACCTTGACCAGGAAGGAGCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000472186.5
ENST00000476245.5
CDS CCA 90 bp AGGTGGAAGGGGGTGGAGAGACTTGGCGTTACTGCCCAGACTCACTaGCCCATCTCTTCTCTCATGGCTGCCCCCAGCTACGTCTGCATC +
Preference number: 5 (lower is better)
Translates to: RWKGVERLGVTAQTH*PISSLMAAPSYVCI
Trigger: GATGCAGACGTAGCTGGGGGCAGCCATGAGAGAAGAGATGGGCCAGTGAGTCTGGGCAGTAACGCCAAGTCTCTCCACCCCCTTCCACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000467370.5
CDS-3UTR CAA 90 bp GAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTCGCCACCGGGAGTACTaGAATACCGGCACTCCATCC +
Preference number: 5 (lower is better)
Translates to: EALFSLGGAHLTQPRAASRHREY*NTGTPS
Trigger: GGATGGAGTGCCGGTATTCAAGTACTCCCGGTGGCG...AGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp CTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGGCGCCACCGGGAGTACTaGAATACCGGCACTCCATCC +
Preference number: 5 (lower is better)
Translates to: LLLTGQRASKMQTWCAGRRHREY*NTGTPS
Trigger: GGATGGAGTGCCGGTATTCAAGTACTCCCGGTGGCG...CCTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp GGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCGCAAAGCCTGTCCTTTaGCACGCCACCGGGAGTACT +
Preference number: 5 (lower is better)
Translates to: GLLLTGQRASKMQTWCAGAKPVL*HATGST
Trigger: AGTACTCCCGGTGGCGTGCAAAAGGACAGGCTTTGC...GCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp CGCAGACCAGTGTGGCCCCTTCCTTCACGCCATGCTGGCAGTACTCCATCAGCTGCAAAGCCTGTCCTTTaGCACGCCACCGGGAGTACT +
Preference number: 5 (lower is better)
Translates to: RRPVWPLPSRHAGSTPSAAKPVL*HATGST
Trigger: AGTACTCCCGGTGGCGTGCAAAAGGACAGGCTTTGC...AGCTGATGGAGTACTGCCAGCATGGCGTGAAGGAAGGGGCCACACTGGTCTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CAA 90 bp ATCACCACTGTGTTCCCGGCAGCCAGGCAGGCAGCTGTCTTCCAGGACAGCATCCTCCATGGGGATGAATaGGCTGCAGAAGGGCAGGAC +
Preference number: 5 (lower is better)
Translates to: ITTVFPAARQAAVFQDSILHGDE*AAEGQD
Trigger: GTCCTGCCCTTCTGCAGCCAATTCATCCCCATGGAG...GATGCTGTCCTGGAAGACAGCTGCCTGCCTGGCTGCCGGGAACACAGTGGTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CAA 90 bp ATGCCGGCCTTTAATGTCAGCTCTGCAAACTTCAAGGCTGTGAGTGGGGTCACCCAGGCTCCCGGCACCTaGTCGTTCCCGCGGATCCAG +
Preference number: 5 (lower is better)
Translates to: MPAFNVSSANFKAVSGVTQAPGT*SFPRIQ
Trigger: CTGGATCCGCGGGAACGACAAGGTGCCGGGAGCCTG...GGTGACCCCACTCACAGCCTTGAAGTTTGCAGAGCTGACATTAAAGGCCGGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CAA 90 bp CCTAGATCTTTGCCAAATCCAGACTGTTTGAATCCTCCGAAGGGAGCGGCCACGCAGGCTCCCGGCACCTaGTCGTTCCCGCGGATCCAG +
Preference number: 5 (lower is better)
Translates to: PRSLPNPDCLNPPKGAATQAPGT*SFPRIQ
Trigger: CTGGATCCGCGGGAACGACAAGGTGCCGGGAGCCTG...CGTGGCCGCTCCCTTCGGAGGATTCAAACAGTCTGGATTTGGCAAAGATCTAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CAA 90 bp GCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGAGGATGAGTCCTGCTTaGGTGACCACCCCTGGCCGA +
Preference number: 5 (lower is better)
Translates to: AASDWTEGVQDADMVCRQRMSPA*VTTPGR
Trigger: TCGGCCAGGGGTGGTCACCAAAGCAGGACTCATCCT...CTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp AGGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGTTCACCAGCAGCATTTaGTCATCATTCCCAAAGAGG +
Preference number: 5 (lower is better)
Translates to: RWEVLCTQAQEGGGPSHEFTSSI*SSFPKR
Trigger: CCTCTTTGGGAATGATGACAAAATGCTGCTGGTGAA...CTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp TCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTATGGTCTCAGAGGTCTaGGCGCCCTCGGCATCCACG +
Preference number: 5 (lower is better)
Translates to: SSEALFSLGGAHLTQPRAMVSEV*APSAST
Trigger: CGTGGATGCCGAGGGCGCCAAGACCTCTGAGACCAT...AGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp ATGTCCCTGGTGAAGACACCAGAAGCCAGGCCAAATTCCGTGGCATTGGCCCGAGTCGACGTCGGTGACTaGGGCCAGGGATACCTGGCA +
Preference number: 5 (lower is better)
Translates to: MSLVKTPEARPNSVALARVDVGD*GQGYLA
Trigger: TGCCAGGTATCCCTGGCCCAAGTCACCGACGTCGAC...TCGGGCCAATGCCACGGAATTTGGCCTGGCTTCTGGTGTCTTCACCAGGGACAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CAA 90 bp ACGCCACCGGGAGTACTTGAATACCGGCACTCCATCCTTCTCAGCTTCCAGACAGCTGCGGCCACTGCCTaGTCGACGTCGGTGACTTGG +
Preference number: 5 (lower is better)
Translates to: TPPGVLEYRHSILLSFQTAAATA*STSVTW
Trigger: CCAAGTCACCGACGTCGACAAGGCAGTGGCCGCAGC...TGTCTGGAAGCTGAGAAGGATGGAGTGCCGGTATTCAAGTACTCCCGGTGGCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR CAA 90 bp TTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGACTGGGTGGAGCCCTGGATCTaGTCACACCAGCCAGCAAAG +
Preference number: 5 (lower is better)
Translates to: LFSLGGAHLTQPRAASDWVEPWI*SHQPAK
Trigger: CTTTGCTGGCTGGTGTGACAAGATCCAGGGCTCCAC...CCAGTCAGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000472186.5
CDS-3UTR CAA 90 bp TCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTCTGGTCAAGGTCAGGTaGCGGTTGGGTCTGGCCTGG +
Preference number: 5 (lower is better)
Translates to: SSEALFSLGGAHLTQPRALVKVR*RLGLAW
Trigger: CCAGGCCAGACCCAACCGCAACCTGACCTTGACCAG...AGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp TCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTTCCCTGTCCAGCGGGTaGCCCACCTTCATCTTCCGC +
Preference number: 5 (lower is better)
Translates to: SSEALFSLGGAHLTQPRASLSSG*PTFIFR
Trigger: GCGGAAGATGAAGGTGGGCAACCCGCTGGACAGGGA...AGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp TCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTCCAAATTCCGTGGCATaGGCCCGAGACAGCACGGCA +
Preference number: 5 (lower is better)
Translates to: SEALFSLGGAHLTQPRAAPNSVA*ARDSTA
Trigger: TGCCGTGCTGTCTCGGGCCAATGCCACGGAATTTGG...AGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp GCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGCCAAATTCCGTGGCATaGGCCCGAGACAGCACGGCA +
Preference number: 5 (lower is better)
Translates to: AASDWTEGVQDADMVCRQPNSVA*ARDSTA
Trigger: TGCCGTGCTGTCTCGGGCCAATGCCACGGAATTTGG...CTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp TGTCCAGCGGGTTGCCCACCTTCATCTTCCGCACCTCTTCTACCACTCTCCGCACCAAATTCCGTGGCATaGGCCCGAGACAGCACGGCA +
Preference number: 5 (lower is better)
Translates to: CPAGCPPSSSAPLLPLSAPNSVA*ARDSTA
Trigger: TGCCGTGCTGTCTCGGGCCAATGCCACGGAATTTGG...TGCGGAGAGTGGTAGAAGAGGTGCGGAAGATGAAGGTGGGCAACCCGCTGGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CAA 90 bp CAGCCAAGGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGGTGCCTGCCTGGAGCTaGTCACTGACATACAGGGCC +
Preference number: 5 (lower is better)
Translates to: QPRAASDWTEGVQDADMVVPAWS*SLTYRA
Trigger: GGCCCTGTATGTCAGTGACAAGCTCCAGGCAGGCAC...CACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp GCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGGTGCCTGCCTGGAGCTaGTCACTGACATACAGGGCC +
Preference number: 5 (lower is better)
Translates to: AASDWTEGVQDADMVCRQVPAWS*SLTYRA
Trigger: GGCCCTGTATGTCAGTGACAAGCTCCAGGCAGGCAC...CTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp TCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTATGGTAGCAGGAGGGTaGGAAGGACCGCGCGCAGGA +
Preference number: 5 (lower is better)
Translates to: SSEALFSLGGAHLTQPRAMVAGG*EGPRAG
Trigger: TCCTGCGCGCGGTCCTTCCAACCCTCCTGCTACCAT...AGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
CDS-3UTR CAA 90 bp CCTGTGCTCAGGACCAGCCGGGTGGTCAGGGACAAATCAGGGTCAGTGTTCCTTGGAGCATGGGTGGCTTaGAGCAGGCAAGTGACCCAC +
Preference number: 5 (lower is better)
Translates to: PVLRTSRVVRDKSGSVFLGAWVA*SRQVTH
Trigger: GTGGGTCACTTGCCTGCTCAAAGCCACCCATGCTCC...AAGGAACACTGACCCTGATTTGTCCCTGACCACCCGGCTGGTCCTGAGCACAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493803.5
CDS TCA 90 bp GGCTCACCCCACTTCCAGGTGAGAAGTCGAGGCCCAGCGAGGTCATaGATCTTACCCAGGTTATCCCTGGCAGTGGATAGTGGGCCAGGA +
Preference number: 5 (lower is better)
Translates to: GSPHFQVRSRGPARS*ILPRLSLAVDSGPG
Trigger: TCCTGGCCCACTATCCACTGCCAGGGATAACCTGGGTAAGATTCATGACCTCGCTGGGCCTCGACTTCTCACCTGGAAGTGGGGTGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467370.5
CDS TCA 90 bp CTCAGCAACCACGTGGGGGCAGCTCTGGCTCACCCCACTTCCAGGTaGGAAGTCGAGGCCCAGCGAGGTCATGAATCTTACCCAGGTTAT +
Preference number: 5 (lower is better)
Translates to: LSNHVGAALAHPTSR*EVEAQRGHESYPGY
Trigger: ATAACCTGGGTAAGATTCATGACCTCGCTGGGCCTCGACTTCTCACCTGGAAGTGGGGTGAGCCAGAGCTGCCCCCACGTGGTTGCTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467370.5
CDS GCA 90 bp CCTGTGGTCGGACCTGAGGCAGTGATGAAGGTGTCCCACAAGGGGTaGTGTGCTGGGCGCTCCAGCCTTGTCTCCAACCATTTTGTCATC +
Preference number: 5 (lower is better)
Translates to: PVVGPEAVMKVSHKG*CAGRSSLVSNHFVI
Trigger: GATGACAAAATGGTTGGAGACAAGGCTGGAGCGCCCAGCACAGCACCCCTTGTGGGACACCTTCATCACTGCCTCAGGTCCGACCACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476245.5
CDS-3UTR CAA 90 bp TTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCATGGTAGCAGGAGGGTaGGAAGGACCTGCCATGTGC +
Preference number: 5 (lower is better)
Translates to: FRSFILPGRGTPHPAKGCMVAGG*EGPAMC
Trigger: GCACATGGCAGGTCCTTCCAACCCTCCTGCTACCAT...GCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273450.7
CDS-3UTR CAA 90 bp TTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCGCAAAGCCTGTCCTTTaGCACGCCACCGGGAGTACT +
Preference number: 5 (lower is better)
Translates to: FRSFILPGRGTPHPAKGCAKPVL*HATGST
Trigger: AGTACTCCCGGTGGCGTGCAAAAGGACAGGCTTTGC...GCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp TCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTCTCCATGGGGATGAATaGGCTGCAGAAGGGCAGGAC +
Preference number: 5 (lower is better)
Translates to: SEALFSLGGAHLTQPRAALHGDE*AAEGQD
Trigger: GTCCTGCCCTTCTGCAGCCAATTCATCCCCATGGAG...AGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp TTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCCTCCATGGGGATGAATaGGCTGCAGAAGGGCAGGAC +
Preference number: 5 (lower is better)
Translates to: FRSFILPGRGTPHPAKGCLHGDE*AAEGQD
Trigger: GTCCTGCCCTTCTGCAGCCAATTCATCCCCATGGAG...GCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp GGCCCGAAGGACTCCTCCTTGGCTATGAACATGTGGTCTTCCACGTCTGTGAAAGGGAGTCTGGGGGCTTaGCCCTCAGCGATCAGCCTC +
Preference number: 5 (lower is better)
Translates to: GPKDSSLAMNMWSSTSVKGSLGA*PSAISL
Trigger: GAGGCTGATCGCTGAGGGCAAAGCCCCCAGACTCCC...TTTCACAGACGTGGAAGACCACATGTTCATAGCCAAGGAGGAGTCCTTCGGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CAA 90 bp GTCTTCCACGTCTGTGAAAACAGTTGGCTCAAAGAAGAACCCTGGCCGAGGGACGGGAGTCTGGGGGCTTaGCCCTCAGCGATCAGCCTC +
Preference number: 5 (lower is better)
Translates to: VFHVCENSWLKEEPWPRDGSLGA*PSAISL
Trigger: GAGGCTGATCGCTGAGGGCAAAGCCCCCAGACTCCC...GTCCCTCGGCCAGGGTTCTTCTTTGAGCCAACTGTTTTCACAGACGTGGAAGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CAA 90 bp TCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCCGGCTGGTCCCAGTaGATCTTGGCTGTCTCCTTC +
Preference number: 5 (lower is better)
Translates to: SSEALFSLGGAHLTQPRAAGWSQ*ILAVSF
Trigger: GAAGGAGACAGCCAAGATCAACTGGGACCAGCCGGC...AGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp GCCAGGAAGGGTAGGGAGCCCAGCTTTCCCAGAACAGAGAAGTGGGTAAACTGCGCCGGCTGGTCCCAGTaGATCTTGGCTGTCTCCTTC +
Preference number: 5 (lower is better)
Translates to: ARKGREPSFPRTEKWVNCAGWSQ*ILAVSF
Trigger: GAAGGAGACAGCCAAGATCAACTGGGACCAGCCGGC...GCAGTTTACCCACTTCTCTGTTCTGGGAAAGCTGGGCTCCCTACCCTTCCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493803.5
CDS-3UTR CAA 90 bp TCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTAGGATGAGTCCTGCTTaGGTGACCACCCCTGGCCGA +
Preference number: 5 (lower is better)
Translates to: SSEALFSLGGAHLTQPRARMSPA*VTTPGR
Trigger: TCGGCCAGGGGTGGTCACCAAAGCAGGACTCATCCT...AGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp CGATTTTCCTCACATCAGGATGGTCTGAGAGTCTCTGGCCGACCAGGGAGCCAGAGGATGAGTCCTGCTTaGGTGACCACCCCTGGCCGA +
Preference number: 5 (lower is better)
Translates to: RFSSHQDGLRVSGRPGSQRMSPA*VTTPGR
Trigger: TCGGCCAGGGGTGGTCACCAAAGCAGGACTCATCCT...CTGGCTCCCTGGTCGGCCAGAGACTCTCAGACCATCCTGATGTGAGGAAAATCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CAA 90 bp CTCTCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGAGGATGAGTCCTGCTTaGGTGACCACCCCTGGCCGA +
Preference number: 5 (lower is better)
Translates to: LSSEALFSLGGAHLTQPRRMSPA*VTTPGR
Trigger: TCGGCCAGGGGTGGTCACCAAAGCAGGACTCATCCT...CCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp TCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCAACCTCCAGGACTTaGGGGAGGATCCGCTGCCAA +
Preference number: 5 (lower is better)
Translates to: SEALFSLGGAHLTQPRAASTSRT*GRIRCQ
Trigger: TTGGCAGCGGATCCTCCCCAAAGTCCTGGAGGTTGA...AGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp GGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCGACGCGGCCCCTGACTaGAAGAAATCAGTGGAGTCT +
Preference number: 5 (lower is better)
Translates to: GLLLTGQRASKMQTWCAGDAAPD*KKSVES
Trigger: AGACTCCACTGATTTCTTCAAGTCAGGGGCCGCGTC...GCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp CGCAGACCAGTGTGGCCCCTTCCTTCACGCCATGCTGGCAGTACTCCATCAGCTGACGCGGCCCCTGACTaGAAGAAATCAGTGGAGTCT +
Preference number: 5 (lower is better)
Translates to: RRPVWPLPSRHAGSTPSADAAPD*KKSVES
Trigger: AGACTCCACTGATTTCTTCAAGTCAGGGGCCGCGTC...AGCTGATGGAGTACTGCCAGCATGGCGTGAAGGAAGGGGCCACACTGGTCTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CAA 90 bp GCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGTTCTCAAAGGCATCCTaGGCTGCGGCCACTGCCTTG +
Preference number: 5 (lower is better)
Translates to: AASDWTEGVQDADMVCRQFSKAS*AAATAL
Trigger: CAAGGCAGTGGCCGCAGCCAAGGATGCCTTTGAGAA...CTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp TCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTTCTCAAAGGCATCCTaGGCTGCGGCCACTGCCTTG +
Preference number: 5 (lower is better)
Translates to: SEALFSLGGAHLTQPRAAFSKAS*AAATAL
Trigger: CAAGGCAGTGGCCGCAGCCAAGGATGCCTTTGAGAA...AGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp TCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTGTGGAGCCCTGGATCTaGTCACACCAGCCAGCAAAG +
Preference number: 5 (lower is better)
Translates to: SEALFSLGGAHLTQPRAAVEPWI*SHQPAK
Trigger: CTTTGCTGGCTGGTGTGACAAGATCCAGGGCTCCAC...AGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000472186.5
CDS-3UTR CAA 90 bp GGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCCCCATCTGCACAGCCTaGTTGAGGTCACAGTCAGCA +
Preference number: 5 (lower is better)
Translates to: GLLLTGQRASKMQTWCAGPICTA*LRSQSA
Trigger: TGCTGACTGTGACCTCAACAAGGCTGTGCAGATGGG...GCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp ATTCCCGCCGCAGACCAGTGTGGCCCCTTCCTTCACGCCATGCTGGCAGTACTCCTGACATACAGGGCCTaGTTGATGTCCCTGGTGAAG +
Preference number: 5 (lower is better)
Translates to: IPAADQCGPFLHAMLAVLLTYRA*LMSLVK
Trigger: CTTCACCAGGGACATCAACAAGGCCCTGTATGTCAG...GAGTACTGCCAGCATGGCGTGAAGGAAGGGGCCACACTGGTCTGCGGCGGGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CAA 90 bp CTCTCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGTGCCTGCCTGGAGCTaGTCACTGACATACAGGGCC +
Preference number: 5 (lower is better)
Translates to: LSSEALFSLGGAHLTQPRVPAWS*SLTYRA
Trigger: GGCCCTGTATGTCAGTGACAAGCTCCAGGCAGGCAC...CCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp TTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGACTGGGCGGCCACGTCGGTCTaGTTGTACGTGTTGACAAAC +
Preference number: 5 (lower is better)
Translates to: LFSLGGAHLTQPRAASDWAATSV*LYVLTN
Trigger: GTTTGTCAACACGTACAACAAGACCGACGTGGCCGC...CCAGTCAGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp TTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGACTGGTCGAAGGTCACTGTCTaGACCCGCAGGTACTCGTTC +
Preference number: 5 (lower is better)
Translates to: LFSLGGAHLTQPRAASDWSKVTV*TRRYSF
Trigger: GAACGAGTACCTGCGGGTCAAGACAGTGACCTTCGA...CCAGTCAGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp GTTGCCCACCTTCATCTTCCGCACCTCTTCTACCACTCTCCGCACGAACTCATCATGGTAGCAGGAGGGTaGGAAGGACCGCGCGCAGGA +
Preference number: 5 (lower is better)
Translates to: VAHLHLPHLFYHSPHELIMVAGG*EGPRAG
Trigger: TCCTGCGCGCGGTCCTTCCAACCCTCCTGCTACCAT...GATGAGTTCGTGCGGAGAGTGGTAGAAGAGGTGCGGAAGATGAAGGTGGGCAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CAA 90 bp CCACTCTCCGCACGAACTCATCATGAATGGAGTCCTCCACAAAGAGTCGGCCTGATGGTAGCAGGAGGGTaGGAAGGACCGCGCGCAGGA +
Preference number: 5 (lower is better)
Translates to: PLSARTHHEWSPPQRVGLMVAGG*EGPRAG
Trigger: TCCTGCGCGCGGTCCTTCCAACCCTCCTGCTACCAT...CAGGCCGACTCTTTGTGGAGGACTCCATTCATGATGAGTTCGTGCGGAGAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS TCA 90 bp CCACATCAGGCAAAGCCTGTCCTTTTGCACGCCACCGGGAGTACTTaGATACCGGCACTCCATCCTTCTCAGCTTCCAGACCCAGGGGGT +
Preference number: 5 (lower is better)
Translates to: PHQAKPVLLHATGST*IPALHPSQLPDPGG
Trigger: ACCCCCTGGGTCTGGAAGCTGAGAAGGATGGAGTGCCGGTATTCAAGTACTCCCGGTGGCGTGCAAAAGGACAGGCTTTGCCTGATGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000460368.5
ENST00000472186.5
ENST00000488356.5
ENST00000490367.5
ENST00000509952.5
CDS GCA 90 bp CCAAGAATGGGAAGTGACCGGGTGTCAGAGCATCTGAGGCAGGGCTaGCCAATGGAGCCCTCTGTGGTGATGGATGAGTTCCAAGTCTGC +
Preference number: 5 (lower is better)
Translates to: PRMGSDRVSEHLRQG*PMEPSVVMDEFQVC
Trigger: GCAGACTTGGAACTCATCCATCACCACAGAGGGCTCCATTGGGCAGCCCTGCCTCAGATGCTCTGACACCCGGTCACTTCCCATTCTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476245.5
CDS GCA 90 bp ACAGAGGTGGGAAGAGGAGAGGCTGAAAAAGGGTCTGGCCGGCCCTaGAGTCTGCAGCTTCAGGATAGCACTTCAAGCTGGTCCCAGGTA +
Preference number: 5 (lower is better)
Translates to: TEVGRGEAEKGSGRP*SLQLQDSTSSWSQV
Trigger: TACCTGGGACCAGCTTGAAGTGCTATCCTGAAGCTGCAGACTGCAGGGCCGGCCAGACCCTTTTTCAGCCTCTCCTCTTCCCACCTCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484724.5
CDS CCA 90 bp GACTTGGCGTTACTGCCCAGACTCACTGGCCCATCTCTTCTCTCATaGCTGCCCCCAGCTACGTCTGCATCAAGCTGTGGCTGGGAAAAG +
Preference number: 5 (lower is better)
Translates to: DLALLPRLTGPSLLS*LPPATSASSCGWEK
Trigger: CTTTTCCCAGCCACAGCTTGATGCAGACGTAGCTGGGGGCAGCCATGAGAGAAGAGATGGGCCAGTGAGTCTGGGCAGTAACGCCAAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467370.5
CDS-3UTR CAA 90 bp AGTGGAGTCTTCAACCTCCAGGACTTTGGGGAGGATCCGCTGCCAAACACTCCGGCAAAGCCTGTCCTTTaGCACGCCACCGGGAGTACT +
Preference number: 5 (lower is better)
Translates to: SGVFNLQDFGEDPLPNTPAKPVL*HATGST
Trigger: AGTACTCCCGGTGGCGTGCAAAAGGACAGGCTTTGC...CGGAGTGTTTGGCAGCGGATCCTCCCCAAAGTCCTGGAGGTTGAAGACTCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR CAA 90 bp GGTTGCCCACCTTCATCTTCCGCACCTCTTCTACCACTCTCCGCACGAACTCATGGGAAGAGGAAGCGGTaGTACAGCGTGCTCACGGTG +
Preference number: 5 (lower is better)
Translates to: GCPPSSSAPLLPLSARTHGKRKR*YSVLTV
Trigger: CACCGTGAGCACGCTGTACAACCGCTTCCTCTTCCC...ATGAGTTCGTGCGGAGAGTGGTAGAAGAGGTGCGGAAGATGAAGGTGGGCAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CAA 90 bp TTTGATGCCTTCAGGGAAGAGGAAGCGGTTGTACAGCGTGCTCACGGTGTCGTCAGGATGAGTCCTGCTTaGGTGACCACCCCTGGCCGA +
Preference number: 5 (lower is better)
Translates to: FDAFREEEAVVQRAHGVVRMSPA*VTTPGR
Trigger: TCGGCCAGGGGTGGTCACCAAAGCAGGACTCATCCT...GACGACACCGTGAGCACGCTGTACAACCGCTTCCTCTTCCCTGAAGGCATCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR CAA 90 bp AGGGAGTCTGGGGGCTTTGCCCTCAGCGATCAGCCTCACGGCCTGCACCATCCCTTCACCAGCAGCATTTaGTCATCATTCCCAAAGAGG +
Preference number: 5 (lower is better)
Translates to: RESGGFALSDQPHGLHHPFTSSI*SSFPKR
Trigger: CCTCTTTGGGAATGATGACAAAATGCTGCTGGTGAA...GGGATGGTGCAGGCCGTGAGGCTGATCGCTGAGGGCAAAGCCCCCAGACTCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR CAA 90 bp CTCTCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGTCAACCTCCAGGACTTaGGGGAGGATCCGCTGCCAA +
Preference number: 5 (lower is better)
Translates to: LSSEALFSLGGAHLTQPRSTSRT*GRIRCQ
Trigger: TTGGCAGCGGATCCTCCCCAAAGTCCTGGAGGTTGA...CCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp CTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGGGACGCGGCCCCTGACTaGAAGAAATCAGTGGAGTCT +
Preference number: 5 (lower is better)
Translates to: LLLTGQRASKMQTWCAGRDAAPD*KKSVES
Trigger: AGACTCCACTGATTTCTTCAAGTCAGGGGCCGCGTC...CCTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp CTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGGATGCGGACAGTGCGCTaGTTCACTGCCATTTCCACG +
Preference number: 5 (lower is better)
Translates to: LLLTGQRASKMQTWCAGRMRTVR*FTAIST
Trigger: CGTGGAAATGGCAGTGAACAAGCGCACTGTCCGCAT...CCTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp GAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTATGCGGACAGTGCGCTaGTTCACTGCCATTTCCACG +
Preference number: 5 (lower is better)
Translates to: EALFSLGGAHLTQPRAASMRTVR*FTAIST
Trigger: CGTGGAAATGGCAGTGAACAAGCGCACTGTCCGCAT...AGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp TTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCATGCGGACAGTGCGCTaGTTCACTGCCATTTCCACG +
Preference number: 5 (lower is better)
Translates to: FRSFILPGRGTPHPAKGCMRTVR*FTAIST
Trigger: CGTGGAAATGGCAGTGAACAAGCGCACTGTCCGCAT...GCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp ACACTCCGCACAGCCTCCGCAGTAACCAGCTCTGCCTCTGTCAGCTCAAGGACAATGCGGACAGTGCGCTaGTTCACTGCCATTTCCACG +
Preference number: 5 (lower is better)
Translates to: TLRTASAVTSSASVSSRTMRTVR*FTAIST
Trigger: CGTGGAAATGGCAGTGAACAAGCGCACTGTCCGCAT...TGTCCTTGAGCTGACAGAGGCAGAGCTGGTTACTGCGGAGGCTGTGCGGAGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR CAA 90 bp ATGCCGGCCTTTAATGTCAGCTCTGCAAACTTCAAGGCTGTGAGTGGGGTCACCATGGTCTCAGAGGTCTaGGCGCCCTCGGCATCCACG +
Preference number: 5 (lower is better)
Translates to: MPAFNVSSANFKAVSGVTMVSEV*APSAST
Trigger: CGTGGATGCCGAGGGCGCCAAGACCTCTGAGACCAT...GGTGACCCCACTCACAGCCTTGAAGTTTGCAGAGCTGACATTAAAGGCCGGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CAA 90 bp TTGTCATCATTCCCAAAGAGGATGAGTCCTGCTTTGGTGACCACCCCTGGCCGAATGGTCTCAGAGGTCTaGGCGCCCTCGGCATCCACG +
Preference number: 5 (lower is better)
Translates to: LSSFPKRMSPALVTTPGRMVSEV*APSAST
Trigger: CGTGGATGCCGAGGGCGCCAAGACCTCTGAGACCAT...TCGGCCAGGGGTGGTCACCAAAGCAGGACTCATCCTCTTTGGGAATGATGACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR CAA 90 bp TCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTTTCTCAAAGGCATCCTaGGCTGCGGCCACTGCCTTG +
Preference number: 5 (lower is better)
Translates to: SSEALFSLGGAHLTQPRAFSKAS*AAATAL
Trigger: CAAGGCAGTGGCCGCAGCCAAGGATGCCTTTGAGAA...AGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp TCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGTGGAGCCCTGGATCTaGTCACACCAGCCAGCAAAG +
Preference number: 5 (lower is better)
Translates to: SSEALFSLGGAHLTQPRAVEPWI*SHQPAK
Trigger: CTTTGCTGGCTGGTGTGACAAGATCCAGGGCTCCAC...AGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000472186.5
CDS-3UTR CAA 90 bp TTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGACTGGCTTTTCATGATGTGCTaGCCCACCTCTGTGGAGCCT +
Preference number: 5 (lower is better)
Translates to: LFSLGGAHLTQPRAASDWLFMMC*PTSVEP
Trigger: AGGCTCCACAGAGGTGGGCAAGCACATCATGAAAAG...CCAGTCAGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp GCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGCCCATCTGCACAGCCTaGTTGAGGTCACAGTCAGCA +
Preference number: 5 (lower is better)
Translates to: AASDWTEGVQDADMVCRQPICTA*LRSQSA
Trigger: TGCTGACTGTGACCTCAACAAGGCTGTGCAGATGGG...CTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp GAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTCCCATCTGCACAGCCTaGTTGAGGTCACAGTCAGCA +
Preference number: 5 (lower is better)
Translates to: EALFSLGGAHLTQPRAASPICTA*LRSQSA
Trigger: TGCTGACTGTGACCTCAACAAGGCTGTGCAGATGGG...AGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp CTGGCAGTACTCCATCAGCTTCACAAGGTGGGCATGGTGATTCTGCGGCCCGTGCCCATCTGCACAGCCTaGTTGAGGTCACAGTCAGCA +
Preference number: 5 (lower is better)
Translates to: LAVLHQLHKVGMVILRPVPICTA*LRSQSA
Trigger: TGCTGACTGTGACCTCAACAAGGCTGTGCAGATGGG...CACGGGCCGCAGAATCACCATGCCCACCTTGTGAAGCTGATGGAGTACTGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455064.6
CDS-3UTR CAA 90 bp GTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGGATGCAATTCTCTCCTTaGTTGAAGAAAACAGAACTC +
Preference number: 5 (lower is better)
Translates to: VGGAVHPGSRGRGPQPRGMQFSP*LKKTEL
Trigger: GAGTTCTGTTTTCTTCAACAAAGGAGAGAATTGCAT...CCCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp GTCTTCCACGTCTGTGAAAACAGTTGGCTCAAAGAAGAACCCTGGCCGAGGGACTCCCTGTCCAGCGGGTaGCCCACCTTCATCTTCCGC +
Preference number: 5 (lower is better)
Translates to: VFHVCENSWLKEEPWPRDSLSSG*PTFIFR
Trigger: GCGGAAGATGAAGGTGGGCAACCCGCTGGACAGGGA...GTCCCTCGGCCAGGGTTCTTCTTTGAGCCAACTGTTTTCACAGACGTGGAAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CAA 90 bp TTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGACTGGCCGAAGGACTCCTCCTaGGCTATGAACATGTGGTCT +
Preference number: 5 (lower is better)
Translates to: LFSLGGAHLTQPRAASDWPKDSS*AMNMWS
Trigger: AGACCACATGTTCATAGCCAAGGAGGAGTCCTTCGG...CCAGTCAGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp TTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGACTGGCTGACATACAGGGCCTaGTTGATGTCCCTGGTGAAG +
Preference number: 5 (lower is better)
Translates to: LFSLGGAHLTQPRAASDWLTYRA*LMSLVK
Trigger: CTTCACCAGGGACATCAACAAGGCCCTGTATGTCAG...CCAGTCAGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp TCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTGCGGCCACGTCGGTCTaGTTGTACGTGTTGACAAAC +
Preference number: 5 (lower is better)
Translates to: SEALFSLGGAHLTQPRAAAATSV*LYVLTN
Trigger: GTTTGTCAACACGTACAACAAGACCGACGTGGCCGC...AGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp CAGCCAAGGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGGCGGCCACGTCGGTCTaGTTGTACGTGTTGACAAAC +
Preference number: 5 (lower is better)
Translates to: QPRAASDWTEGVQDADMVAATSV*LYVLTN
Trigger: GTTTGTCAACACGTACAACAAGACCGACGTGGCCGC...CACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp GGCAGTACTCCATCAGCTTCACAAGGTGGGCATGGTGATTCTGCGGCCCGTGGTGCGGCCACGTCGGTCTaGTTGTACGTGTTGACAAAC +
Preference number: 5 (lower is better)
Translates to: GSTPSASQGGHGDSAARGAATSV*LYVLTN
Trigger: GTTTGTCAACACGTACAACAAGACCGACGTGGCCGC...ACCACGGGCCGCAGAATCACCATGCCCACCTTGTGAAGCTGATGGAGTACTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CAA 90 bp CGCAGACCAGTGTGGCCCCTTCCTTCACGCCATGCTGGCAGTACTCCATCAGCTCCAAATCCAGACTGTTaGAATCCTCCGAAGGGAGCG +
Preference number: 5 (lower is better)
Translates to: RRPVWPLPSRHAGSTPSAPNPDC*NPPKGA
Trigger: CGCTCCCTTCGGAGGATTCAAACAGTCTGGATTTGG...AGCTGATGGAGTACTGCCAGCATGGCGTGAAGGAAGGGGCCACACTGGTCTGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CAA 90 bp GGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCCCAAATCCAGACTGTTaGAATCCTCCGAAGGGAGCG +
Preference number: 5 (lower is better)
Translates to: GLLLTGQRASKMQTWCAGPNPDC*NPPKGA
Trigger: CGCTCCCTTCGGAGGATTCAAACAGTCTGGATTTGG...GCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp CTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGGTCGAAGGTCACTGTCTaGACCCGCAGGTACTCGTTC +
Preference number: 5 (lower is better)
Translates to: LLLTGQRASKMQTWCAGRSKVTV*TRRYSF
Trigger: GAACGAGTACCTGCGGGTCAAGACAGTGACCTTCGA...CCTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp TTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTCGAAGGTCACTGTCTaGACCCGCAGGTACTCGTTC +
Preference number: 5 (lower is better)
Translates to: FRSFILPGRGTPHPAKGCSKVTV*TRRYSF
Trigger: GAACGAGTACCTGCGGGTCAAGACAGTGACCTTCGA...GCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp GCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGTCGAAGGTCACTGTCTaGACCCGCAGGTACTCGTTC +
Preference number: 5 (lower is better)
Translates to: AASDWTEGVQDADMVCRQSKVTV*TRRYSF
Trigger: GAACGAGTACCTGCGGGTCAAGACAGTGACCTTCGA...CTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp GTTGACAAACACAGTGCCTGCCTGGAGCTTGTCACTGACATACAGGGCCTTGTTGCCCCGAAACTGAGGTaGGTGCAGACCCGTCCTGGG +
Preference number: 5 (lower is better)
Translates to: VDKHSACLELVTDIQGLVAPKLR*VQTRPG
Trigger: CCCAGGACGGGTCTGCACCAACCTCAGTTTCGGGGC...AACAAGGCCCTGTATGTCAGTGACAAGCTCCAGGCAGGCACTGTGTTTGTCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS TCA 90 bp GGCGCCTACATGCTTGGCATCCAGCGGGGTCCGAACTCCTCCTGCTaGGCAGCTCTCGTCCTCTGCCTGTTCCTCCTTTGTTCTATATTT +
Preference number: 5 (lower is better)
Translates to: GAYMLGIQRGPNSSC*AALVLCLFLLCSIF
Trigger: AAATATAGAACAAAGGAGGAACAGGCAGAGGACGAGAGCTGCTCAGCAGGAGGAGTTCGGACCCCGCTGGATGCCAAGCATGTAGGCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476245.5
CDS TCA 90 bp AGCTTTCTGCAAGCTAAAGCCCAGCCAGACTCCACAGGGCGTGGCTaGGAGATGCTTCAACCCAGGGTCTTCTGGGTTGATCTGTGGGGA +
Preference number: 5 (lower is better)
Translates to: SFLQAKAQPDSTGRG*EMLQPRVFWVDLWG
Trigger: TCCCCACAGATCAACCCAGAAGACCCTGGGTTGAAGCATCTCTCAGCCACGCCCTGTGGAGTCTGGCTGGGCTTTAGCTTGCAGAAAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484724.5
CDS CCA 90 bp GGCTCTGCACGTGCTAAGTTACCATGGCATCGCCGTTCAAAGAGATaGGAGCTGAGGCACAGAGGCTTAATGACCCCACACCCAGAGGTG +
Preference number: 5 (lower is better)
Translates to: GSARAKLPWHRRSKR*ELRHRGLMTPHPEV
Trigger: CACCTCTGGGTGTGGGGTCATTAAGCCTCTGTGCCTCAGCTCCCATCTCTTTGAACGGCGATGCCATGGTAACTTAGCACGTGCAGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484724.5
CDS-3UTR CAA 90 bp AATGGCCTCTGCCGGCTGGTCCCAGTTGATCTTGGCTGTCTCCTTCTTCTGAATGGGAAGAGGAAGCGGTaGTACAGCGTGCTCACGGTG +
Preference number: 5 (lower is better)
Translates to: NGLCRLVPVDLGCLLLLNGKRKR*YSVLTV
Trigger: CACCGTGAGCACGCTGTACAACCGCTTCCTCTTCCC...ATTCAGAAGAAGGAGACAGCCAAGATCAACTGGGACCAGCCGGCAGAGGCCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000493803.5
CDS-3UTR CAA 90 bp TCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGACGCGGCCCCTGACTaGAAGAAATCAGTGGAGTCT +
Preference number: 5 (lower is better)
Translates to: SSEALFSLGGAHLTQPRADAAPD*KKSVES
Trigger: AGACTCCACTGATTTCTTCAAGTCAGGGGCCGCGTC...AGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp TCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTCTTCCATCGGTGGGATaGATGGTCTCAGAGGTCTTG +
Preference number: 5 (lower is better)
Translates to: SEALFSLGGAHLTQPRAALPSVG*MVSEVL
Trigger: CAAGACCTCTGAGACCATCAATCCCACCGATGGAAG...AGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp GCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGCTTCCATCGGTGGGATaGATGGTCTCAGAGGTCTTG +
Preference number: 5 (lower is better)
Translates to: AASDWTEGVQDADMVCRQLPSVG*MVSEVL
Trigger: CAAGACCTCTGAGACCATCAATCCCACCGATGGAAG...CTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp GGACTCCTCCTTGGCTATGAACATGTGGTCTTCCACGTCTGTGAAAACAGTTGGGCTGCGGCCACTGCCTaGTCGACGTCGGTGACTTGG +
Preference number: 5 (lower is better)
Translates to: GLLLGYEHVVFHVCENSWAAATA*STSVTW
Trigger: CCAAGTCACCGACGTCGACAAGGCAGTGGCCGCAGC...CCAACTGTTTTCACAGACGTGGAAGACCACATGTTCATAGCCAAGGAGGAGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CAA 90 bp TTCTCAGCTTCCAGACAGTGGCAGCTGCTTCCTGCAGTCGCTGTCCCCAATAACTTCTCAAAGGCATCCTaGGCTGCGGCCACTGCCTTG +
Preference number: 5 (lower is better)
Translates to: FSASRQWQLLPAVAVPNNFSKAS*AAATAL
Trigger: CAAGGCAGTGGCCGCAGCCAAGGATGCCTTTGAGAA...GTTATTGGGGACAGCGACTGCAGGAAGCAGCTGCCACTGTCTGGAAGCTGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR CAA 90 bp CAGCCAAGGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGCTTTTCATGATGTGCTaGCCCACCTCTGTGGAGCCT +
Preference number: 5 (lower is better)
Translates to: QPRAASDWTEGVQDADMVLFMMC*PTSVEP
Trigger: AGGCTCCACAGAGGTGGGCAAGCACATCATGAAAAG...CACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp GAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTCTTTTCATGATGTGCTaGCCCACCTCTGTGGAGCCT +
Preference number: 5 (lower is better)
Translates to: EALFSLGGAHLTQPRAASLFMMC*PTSVEP
Trigger: AGGCTCCACAGAGGTGGGCAAGCACATCATGAAAAG...AGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp GCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGCTTTTCATGATGTGCTaGCCCACCTCTGTGGAGCCT +
Preference number: 5 (lower is better)
Translates to: AASDWTEGVQDADMVCRQLFMMC*PTSVEP
Trigger: AGGCTCCACAGAGGTGGGCAAGCACATCATGAAAAG...CTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp TTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGACTGGATCTGCACAGCCTTGTaGAGGTCACAGTCAGCAAAG +
Preference number: 5 (lower is better)
Translates to: LFSLGGAHLTQPRAASDWICTAL*RSQSAK
Trigger: CTTTGCTGACTGTGACCTCAACAAGGCTGTGCAGAT...CCAGTCAGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp TTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCCCGAAGGACTCCTCCTaGGCTATGAACATGTGGTCT +
Preference number: 5 (lower is better)
Translates to: FRSFILPGRGTPHPAKGCPKDSS*AMNMWS
Trigger: AGACCACATGTTCATAGCCAAGGAGGAGTCCTTCGG...GCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp CAGCCAAGGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGCTGACATACAGGGCCTaGTTGATGTCCCTGGTGAAG +
Preference number: 5 (lower is better)
Translates to: QPRAASDWTEGVQDADMVLTYRA*LMSLVK
Trigger: CTTCACCAGGGACATCAACAAGGCCCTGTATGTCAG...CACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp GCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGCTGACATACAGGGCCTaGTTGATGTCCCTGGTGAAG +
Preference number: 5 (lower is better)
Translates to: AASDWTEGVQDADMVCRQLTYRA*LMSLVK
Trigger: CTTCACCAGGGACATCAACAAGGCCCTGTATGTCAG...CTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp CTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGGCTGACATACAGGGCCTaGTTGATGTCCCTGGTGAAG +
Preference number: 5 (lower is better)
Translates to: LLLTGQRASKMQTWCAGRLTYRA*LMSLVK
Trigger: CTTCACCAGGGACATCAACAAGGCCCTGTATGTCAG...CCTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp ATGCCGGCCTTTAATGTCAGCTCTGCAAACTTCAAGGCTGTGAGTGGGGTCACCGTGCCTGCCTGGAGCTaGTCACTGACATACAGGGCC +
Preference number: 5 (lower is better)
Translates to: MPAFNVSSANFKAVSGVTVPAWS*SLTYRA
Trigger: GGCCCTGTATGTCAGTGACAAGCTCCAGGCAGGCAC...GGTGACCCCACTCACAGCCTTGAAGTTTGCAGAGCTGACATTAAAGGCCGGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CAA 90 bp TCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCGGCCACGTCGGTCTaGTTGTACGTGTTGACAAAC +
Preference number: 5 (lower is better)
Translates to: SSEALFSLGGAHLTQPRAAATSV*LYVLTN
Trigger: GTTTGTCAACACGTACAACAAGACCGACGTGGCCGC...AGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp CAGCCAAGGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGCCAAATCCAGACTGTTaGAATCCTCCGAAGGGAGCG +
Preference number: 5 (lower is better)
Translates to: QPRAASDWTEGVQDADMVPNPDC*NPPKGA
Trigger: CGCTCCCTTCGGAGGATTCAAACAGTCTGGATTTGG...CACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp GAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTCCAAATCCAGACTGTTaGAATCCTCCGAAGGGAGCG +
Preference number: 5 (lower is better)
Translates to: EALFSLGGAHLTQPRAASPNPDC*NPPKGA
Trigger: CGCTCCCTTCGGAGGATTCAAACAGTCTGGATTTGG...AGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp TCCCTGGTGAAGACACCAGAAGCCAGGCCAAATTCCGTGGCATTGGCCCGAGACCCAAATCCAGACTGTTaGAATCCTCCGAAGGGAGCG +
Preference number: 5 (lower is better)
Translates to: SLVKTPEARPNSVALARDPNPDC*NPPKGA
Trigger: CGCTCCCTTCGGAGGATTCAAACAGTCTGGATTTGG...GTCTCGGGCCAATGCCACGGAATTTGGCCTGGCTTCTGGTGTCTTCACCAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CAA 90 bp CTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGGCCAAATCCAGACTGTTaGAATCCTCCGAAGGGAGCG +
Preference number: 5 (lower is better)
Translates to: LLLTGQRASKMQTWCAGRPNPDC*NPPKGA
Trigger: CGCTCCCTTCGGAGGATTCAAACAGTCTGGATTTGG...CCTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp CGATTTTCCTCACATCAGGATGGTCTGAGAGTCTCTGGCCGACCAGGGAGCCAGTCGAAGGTCACTGTCTaGACCCGCAGGTACTCGTTC +
Preference number: 5 (lower is better)
Translates to: RFSSHQDGLRVSGRPGSQSKVTV*TRRYSF
Trigger: GAACGAGTACCTGCGGGTCAAGACAGTGACCTTCGA...CTGGCTCCCTGGTCGGCCAGAGACTCTCAGACCATCCTGATGTGAGGAAAATCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS GCA 90 bp CAGCAAGGGCTGGATGATAACGGCCTGCACTGTCCCATCCTTGCTTaGTGTGGATGGATAAGAGCTCCTGTACACAAAGAGGCCGAGGGA +
Preference number: 5 (lower is better)
Translates to: QQGLDDNGLHCPILA*CGWIRAPVHKEAEG
Trigger: TCCCTCGGCCTCTTTGTGTACAGGAGCTCTTATCCATCCACAGCAAGCAAGGATGGGACAGTGCAGGCCGTTATCATCCAGCCCTTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484724.5
CDS CCA 90 bp ACTTGCAACACCCGTGGTGTTCACCCGGGGGTACATTTGGTCCCATaGCTCCTCTTTACACTAAGGATGCAACCTGAGCCCCTGACCATG +
Preference number: 5 (lower is better)
Translates to: TCNTRGVHPGVHLVP*LLFTLRMQPEPLTM
Trigger: CATGGTCAGGGGCTCAGGTTGCATCCTTAGTGTAAAGAGGAGCCATGGGACCAAATGTACCCCCGGGTGAACACCACGGGTGTTGCAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467370.5
CDS CCA 90 bp GAGGCCCAGCGAGGTCATGAATCTTACCCAGGTTATCCCTGGCAGTaGATAGTGGGCCAGGACTCCCCAGAATACAAAGCCAATCTGAGG +
Preference number: 5 (lower is better)
Translates to: EAQRGHESYPGYPWQ*IVGQDSPEYKANLR
Trigger: CCTCAGATTGGCTTTGTATTCTGGGGAGTCCTGGCCCACTATCCACTGCCAGGGATAACCTGGGTAAGATTCATGACCTCGCTGGGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467370.5
CDS-3UTR CAA 90 bp GCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGTCGGCCTTTCCATCCTaGTCTGGAACAGTGAACACA +
Preference number: 5 (lower is better)
Translates to: AASDWTEGVQDADMVCRQSAFPS*SGTVNT
Trigger: TGTGTTCACTGTTCCAGACAAGGATGGAAAGGCCGA...CTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp CAGCCAAGGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTCGGCCTTTCCATCCTaGTCTGGAACAGTGAACACA +
Preference number: 5 (lower is better)
Translates to: QPRAASDWTEGVQDADMVSAFPS*SGTVNT
Trigger: TGTGTTCACTGTTCCAGACAAGGATGGAAAGGCCGA...CACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp TTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCCCAAAGCCTGGTATTTaGCCACCACATCAGGCAAAG +
Preference number: 5 (lower is better)
Translates to: FRSFILPGRGTPHPAKGCPKPGI*PPHQAK
Trigger: CTTTGCCTGATGTGGTGGCAAAATACCAGGCTTTGG...GCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp TCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTCCAAAGCCTGGTATTTaGCCACCACATCAGGCAAAG +
Preference number: 5 (lower is better)
Translates to: SEALFSLGGAHLTQPRAAPKPGI*PPHQAK
Trigger: CTTTGCCTGATGTGGTGGCAAAATACCAGGCTTTGG...AGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp TATGGCACAGCTTTTCATGATGTGCTTGCCCACCTCTGTGGAGCCTGTGAACCCCTCCATGGGGATGAATaGGCTGCAGAAGGGCAGGAC +
Preference number: 5 (lower is better)
Translates to: YGTAFHDVLAHLCGACEPLHGDE*AAEGQD
Trigger: GTCCTGCCCTTCTGCAGCCAATTCATCCCCATGGAG...GGGTTCACAGGCTCCACAGAGGTGGGCAAGCACATCATGAAAAGCTGTGCCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000455064.6
CDS-3UTR CAA 90 bp CCCGTGGTCGGTGTCCCTGTCCAGCGGGTTGCCCACCTTCATCTTCCGCACCTCGTGTTCAGCGTTGAGTaGAAAAATGTCAGTTTCTGT +
Preference number: 5 (lower is better)
Translates to: PVVGVPVQRVAHLHLPHLVFSVE*KNVSFC
Trigger: ACAGAAACTGACATTTTTCAACTCAACGCTGAACAC...GAGGTGCGGAAGATGAAGGTGGGCAACCCGCTGGACAGGGACACCGACCACGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CAA 90 bp CTCTCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGCTTCCATCGGTGGGATaGATGGTCTCAGAGGTCTTG +
Preference number: 5 (lower is better)
Translates to: LSSEALFSLGGAHLTQPRLPSVG*MVSEVL
Trigger: CAAGACCTCTGAGACCATCAATCCCACCGATGGAAG...CCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp TCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTCTTCCATCGGTGGGATaGATGGTCTCAGAGGTCTTG +
Preference number: 5 (lower is better)
Translates to: SSEALFSLGGAHLTQPRALPSVG*MVSEVL
Trigger: CAAGACCTCTGAGACCATCAATCCCACCGATGGAAG...AGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp GACCTTTCTTCAGTATTCGAAGGTCACTGTCTTGACCCGCAGGTACTCGTTCAGCTGGTCAAGGTCAGGTaGCGGTTGGGTCTGGCCTGG +
Preference number: 5 (lower is better)
Translates to: DLSSVFEGHCLDPQVLVQLVKVR*RLGLAW
Trigger: CCAGGCCAGACCCAACCGCAACCTGACCTTGACCAG...CTGAACGAGTACCTGCGGGTCAAGACAGTGACCTTCGAATACTGAAGAAAGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CAA 90 bp TCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTATCTGCACAGCCTTGTaGAGGTCACAGTCAGCAAAG +
Preference number: 5 (lower is better)
Translates to: SEALFSLGGAHLTQPRAAICTAL*RSQSAK
Trigger: CTTTGCTGACTGTGACCTCAACAAGGCTGTGCAGAT...AGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp CTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGGATCTGCACAGCCTTGTaGAGGTCACAGTCAGCAAAG +
Preference number: 5 (lower is better)
Translates to: LLLTGQRASKMQTWCAGRICTAL*RSQSAK
Trigger: CTTTGCTGACTGTGACCTCAACAAGGCTGTGCAGAT...CCTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp GGGGTGACTTCCCGCCCAGTTCCAGGGACACCTTCTTCACGTTACTTATGGCACCCGAAGGACTCCTCCTaGGCTATGAACATGTGGTCT +
Preference number: 5 (lower is better)
Translates to: GVTSRPVPGTPSSRYLWHPKDSS*AMNMWS
Trigger: AGACCACATGTTCATAGCCAAGGAGGAGTCCTTCGG...GTGCCATAAGTAACGTGAAGAAGGTGTCCCTGGAACTGGGCGGGAAGTCACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455064.6
CDS-3UTR CAA 90 bp GAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGCCACGTCGGTCTTGTaGTACGTGTTGACAAACACA +
Preference number: 5 (lower is better)
Translates to: EALFSLGGAHLTQPRAASATSVL*YVLTNT
Trigger: TGTGTTTGTCAACACGTACAACAAGACCGACGTGGC...AGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp TGTCCAGCGGGTTGCCCACCTTCATCTTCCGCACCTCTTCTACCACTCTCCGCAGCCACGTCGGTCTTGTaGTACGTGTTGACAAACACA +
Preference number: 5 (lower is better)
Translates to: CPAGCPPSSSAPLLPLSAATSVL*YVLTNT
Trigger: TGTGTTTGTCAACACGTACAACAAGACCGACGTGGC...TGCGGAGAGTGGTAGAAGAGGTGCGGAAGATGAAGGTGGGCAACCCGCTGGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CAA 90 bp CAGCCAAGGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGGCCACGTCGGTCTTGTaGTACGTGTTGACAAACACA +
Preference number: 5 (lower is better)
Translates to: QPRAASDWTEGVQDADMVATSVL*YVLTNT
Trigger: TGTGTTTGTCAACACGTACAACAAGACCGACGTGGC...CACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS GCA 90 bp CTTGTCTCCAACCATTTTGTCATCATTCCCAAAGAGGATGAGTCCTaGTTTGGTGACCACCCCTGGCCGATGGGCTCCTGGGATGGGCAA +
Preference number: 5 (lower is better)
Translates to: LVSNHFVIIPKEDES*FGDHPWPMGSWDGQ
Trigger: TTGCCCATCCCAGGAGCCCATCGGCCAGGGGTGGTCACCAAAGCAGGACTCATCCTCTTTGGGAATGATGACAAAATGGTTGGAGACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476245.5
CDS CCA 90 bp GAAGTCGAGGCCCAGCGAGGTCATGAATCTTACCCAGGTTATCCCTaGCAGTGGATAGTGGGCCAGGACTCCCCAGAATACAAAGCCAAT +
Preference number: 5 (lower is better)
Translates to: EVEAQRGHESYPGYP*QWIVGQDSPEYKAN
Trigger: ATTGGCTTTGTATTCTGGGGAGTCCTGGCCCACTATCCACTGCCAGGGATAACCTGGGTAAGATTCATGACCTCGCTGGGCCTCGACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467370.5
CDS CCA 90 bp GTAGCAGGAGGGTTGGAAGGACCTTGCTTGTTCACTCAGTACTCCTaGGGGTCGCTAGAAGCTGTACTTTGGATCCCGCTTCTGACACCA +
Preference number: 5 (lower is better)
Translates to: VAGGLEGPCLFTQYS*GSLEAVLWIPLLTP
Trigger: TGGTGTCAGAAGCGGGATCCAAAGTACAGCTTCTAGCGACCCCCAGGAGTACTGAGTGAACAAGCAAGGTCCTTCCAACCCTCCTGCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509952.5
ENST00000511283.2
CDS-3UTR CAA 90 bp CATCTTCCGCACCTCTTCTACCACTCTCCGCACGAACTCATCATGAATGGAGTCGCAAAGCCTGTCCTTTaGCACGCCACCGGGAGTACT +
Preference number: 5 (lower is better)
Translates to: HLPHLFYHSPHELIMNGVAKPVL*HATGST
Trigger: AGTACTCCCGGTGGCGTGCAAAAGGACAGGCTTTGC...GACTCCATTCATGATGAGTTCGTGCGGAGAGTGGTAGAAGAGGTGCGGAAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CAA 90 bp TCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTCCAAAGCCTGGTATTTaGCCACCACATCAGGCAAAG +
Preference number: 5 (lower is better)
Translates to: SSEALFSLGGAHLTQPRAPKPGI*PPHQAK
Trigger: CTTTGCCTGATGTGGTGGCAAAATACCAGGCTTTGG...AGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp CTCATCATGAATGGAGTCCTCCACAAAGAGTCGGCCTGCTGCAATGCAATTCTCGCCGGCTGGTCCCAGTaGATCTTGGCTGTCTCCTTC +
Preference number: 5 (lower is better)
Translates to: LIMNGVLHKESACCNAILAGWSQ*ILAVSF
Trigger: GAAGGAGACAGCCAAGATCAACTGGGACCAGCCGGC...GAGAATTGCATTGCAGCAGGCCGACTCTTTGTGGAGGACTCCATTCATGATGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CAA 90 bp ACATCAGGATGGTCTGAGAGTCTCTGGCCGACCAGGGAGCCAGATCCTGGGAGGTTCACCAGCAGCATTTaGTCATCATTCCCAAAGAGG +
Preference number: 5 (lower is better)
Translates to: TSGWSESLWPTREPDPGRFTSSI*SSFPKR
Trigger: CCTCTTTGGGAATGATGACAAAATGCTGCTGGTGAA...CCTCCCAGGATCTGGCTCCCTGGTCGGCCAGAGACTCTCAGACCATCCTGATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CAA 90 bp GTTGACAAACACAGTGCCTGCCTGGAGCTTGTCACTGACATACAGGGCCTTGTTTCAACCTCCAGGACTTaGGGGAGGATCCGCTGCCAA +
Preference number: 5 (lower is better)
Translates to: VDKHSACLELVTDIQGLVSTSRT*GRIRCQ
Trigger: TTGGCAGCGGATCCTCCCCAAAGTCCTGGAGGTTGA...AACAAGGCCCTGTATGTCAGTGACAAGCTCCAGGCAGGCACTGTGTTTGTCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CAA 90 bp AATTGGCTGCAGAAGGGCAGGACGTTGAGCTCGGCCCCCAAAGCCTGGTATTTTCTTCCATCGGTGGGATaGATGGTCTCAGAGGTCTTG +
Preference number: 5 (lower is better)
Translates to: NWLQKGRTLSSAPKAWYFLPSVG*MVSEVL
Trigger: CAAGACCTCTGAGACCATCAATCCCACCGATGGAAG...AAAATACCAGGCTTTGGGGGCCGAGCTCAACGTCCTGCCCTTCTGCAGCCAATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR CAA 90 bp TCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTACGTTAACCACACCTTaGGGAATGCCGGCCTTTAAT +
Preference number: 5 (lower is better)
Translates to: SEALFSLGGAHLTQPRAATLTTP*GMPAFN
Trigger: ATTAAAGGCCGGCATTCCCAAAGGTGTGGTTAACGT...AGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp TTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCACGTTAACCACACCTTaGGGAATGCCGGCCTTTAAT +
Preference number: 5 (lower is better)
Translates to: FRSFILPGRGTPHPAKGCTLTTP*GMPAFN
Trigger: ATTAAAGGCCGGCATTCCCAAAGGTGTGGTTAACGT...GCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS TCA 90 bp GAAGCACATGGATGGCTGTTTGATAAATGCACGCACAGGGTGCTGTaGGCTCCCGCAGGCTGTGCTACAGTTCCGTGTACTGCATGGAAA +
Preference number: 5 (lower is better)
Translates to: EAHGWLFDKCTHRVL*APAGCATVPCTAWK
Trigger: TTTCCATGCAGTACACGGAACTGTAGCACAGCCTGCGGGAGCTCACAGCACCCTGTGCGTGCATTTATCAAACAGCCATCCATGTGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476245.5
CDS TCA 90 bp ACTCTGTATGCATGCTCTGCCAGAACTGGAACTTGCCTCTCGGCCTaGCCCTCGCCCCATTGCCTTTCAAAGATGTTCTGGAGCTTTCTG +
Preference number: 5 (lower is better)
Translates to: TLYACSARTGTCLSA*PSPHCLSKMFWSFL
Trigger: CAGAAAGCTCCAGAACATCTTTGAAAGGCAATGGGGCGAGGGTCAGGCCGAGAGGCAAGTTCCAGTTCTGGCAGAGCATGCATACAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484724.5
CDS GCA 90 bp CTCAAGAAGCACATGGATGGCTGTTTGATAAATGCACGCACAGGGTaGTGTGAGCTCCCGCAGGCTGTGCTACAGTTCCGTGTACTGCAT +
Preference number: 5 (lower is better)
Translates to: LKKHMDGCLINARTG*CELPQAVLQFRVLH
Trigger: ATGCAGTACACGGAACTGTAGCACAGCCTGCGGGAGCTCACAGCACCCTGTGCGTGCATTTATCAAACAGCCATCCATGTGCTTCTTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476245.5
CDS CCA 90 bp GCAGAGCAAACAGAGAGGCTGGGAGTCATGAACACATCACATCAGTaGGCAAGAAATGCACTGCAGGGATGCTGTCCTCAGCTGGACACT +
Preference number: 5 (lower is better)
Translates to: AEQTERLGVMNTSHQ*ARNALQGCCPQLDT
Trigger: AGTGTCCAGCTGAGGACAGCATCCCTGCAGTGCATTTCTTGCCCACTGATGTGATGTGTTCATGACTCCCAGCCTCTCTGTTTGCTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467370.5
CDS-3UTR CAA 90 bp CACGGCATCCAAGTCCCCATCAGCAAACCGAGAGATGATCATGACAGGCCCGAACCAAAGCCTGGTATTTaGCCACCACATCAGGCAAAG +
Preference number: 5 (lower is better)
Translates to: HGIQVPISKPRDDHDRPEPKPGI*PPHQAK
Trigger: CTTTGCCTGATGTGGTGGCAAAATACCAGGCTTTGG...TTCGGGCCTGTCATGATCATCTCTCGGTTTGCTGATGGGGACTTGGATGCCGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CAA 90 bp AATTGGCTGCAGAAGGGCAGGACGTTGAGCTCGGCCCCCAAAGCCTGGTATTTTCCAAAGCCTGGTATTTaGCCACCACATCAGGCAAAG +
Preference number: 5 (lower is better)
Translates to: NWLQKGRTLSSAPKAWYFPKPGI*PPHQAK
Trigger: CTTTGCCTGATGTGGTGGCAAAATACCAGGCTTTGG...AAAATACCAGGCTTTGGGGGCCGAGCTCAACGTCCTGCCCTTCTGCAGCCAATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR CAA 90 bp GTCCCCAATAACTTTGGGCTCTCTGCCTTCCACTCTTCAATACCCAAGGAACACCTCCATGGGGATGAATaGGCTGCAGAAGGGCAGGAC +
Preference number: 5 (lower is better)
Translates to: VPNNFGLSAFHSSIPKEHLHGDE*AAEGQD
Trigger: GTCCTGCCCTTCTGCAGCCAATTCATCCCCATGGAG...GTGTTCCTTGGGTATTGAAGAGTGGAAGGCAGAGAGCCCAAAGTTATTGGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR CAA 90 bp CTGGGGGCTTTGCCCTCAGCGATCAGCCTCACGGCCTGCACCATCCCTTTGATGGTGTTCAGCGTTGAGTaGAAAAATGTCAGTTTCTGT +
Preference number: 5 (lower is better)
Translates to: LGALPSAISLTACTIPLMVFSVE*KNVSFC
Trigger: ACAGAAACTGACATTTTTCAACTCAACGCTGAACAC...CATCAAAGGGATGGTGCAGGCCGTGAGGCTGATCGCTGAGGGCAAAGCCCCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000493803.5
CDS-3UTR CAA 90 bp TCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTTCACCAGCAGCATTTaGTCATCATTCCCAAAGAGG +
Preference number: 5 (lower is better)
Translates to: SEALFSLGGAHLTQPRAAFTSSI*SSFPKR
Trigger: CCTCTTTGGGAATGATGACAAAATGCTGCTGGTGAA...AGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp TTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCACCAGCAGCATTTaGTCATCATTCCCAAAGAGG +
Preference number: 5 (lower is better)
Translates to: FRSFILPGRGTPHPAKGCFTSSI*SSFPKR
Trigger: CCTCTTTGGGAATGATGACAAAATGCTGCTGGTGAA...GCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp CATCTTCCGCACCTCTTCTACCACTCTCCGCACGAACTCATCATGAATGGAGTCATGCGGACAGTGCGCTaGTTCACTGCCATTTCCACG +
Preference number: 5 (lower is better)
Translates to: HLPHLFYHSPHELIMNGVMRTVR*FTAIST
Trigger: CGTGGAAATGGCAGTGAACAAGCGCACTGTCCGCAT...GACTCCATTCATGATGAGTTCGTGCGGAGAGTGGTAGAAGAGGTGCGGAAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CAA 90 bp GTTGCCCACCTTCATCTTCCGCACCTCTTCTACCACTCTCCGCACGAACTCATCATCTGCACAGCCTTGTaGAGGTCACAGTCAGCAAAG +
Preference number: 5 (lower is better)
Translates to: VAHLHLPHLFYHSPHELIICTAL*RSQSAK
Trigger: CTTTGCTGACTGTGACCTCAACAAGGCTGTGCAGAT...GATGAGTTCGTGCGGAGAGTGGTAGAAGAGGTGCGGAAGATGAAGGTGGGCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455064.6
CDS-3UTR CAA 90 bp CCGAGAGATGATCATGACAGGCCCGAAGGACTCCTCCTTGGCTATGAACATGTGCCGAAGGACTCCTCCTaGGCTATGAACATGTGGTCT +
Preference number: 5 (lower is better)
Translates to: PRDDHDRPEGLLLGYEHVPKDSS*AMNMWS
Trigger: AGACCACATGTTCATAGCCAAGGAGGAGTCCTTCGG...CACATGTTCATAGCCAAGGAGGAGTCCTTCGGGCCTGTCATGATCATCTCTCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CAA 90 bp CATCTTCCGCACCTCTTCTACCACTCTCCGCACGAACTCATCATGAATGGAGTCTCGAAGGTCACTGTCTaGACCCGCAGGTACTCGTTC +
Preference number: 5 (lower is better)
Translates to: HLPHLFYHSPHELIMNGVSKVTV*TRRYSF
Trigger: GAACGAGTACCTGCGGGTCAAGACAGTGACCTTCGA...GACTCCATTCATGATGAGTTCGTGCGGAGAGTGGTAGAAGAGGTGCGGAAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS GCA 90 bp AGTGGCTGCCTTGTTGGACAGTGCAGCTTCAAGGAGTATTTGAGTTaGTTGCCGTGGGAAGCACAGGTAAGCTCCCTCTCTGTACCACTA +
Preference number: 5 (lower is better)
Translates to: SGCLVGQCSFKEYLS*LPWEAQVSSLSVPL
Trigger: TAGTGGTACAGAGAGGGAGCTTACCTGTGCTTCCCACGGCAAGCAACTCAAATACTCCTTGAAGCTGCACTGTCCAACAAGGCAGCCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476245.5
CDS-3UTR CAA 90 bp AGGGGCAGGGACTTTCTTCTCACAAAGACCTTTCTTCAGTATTCGAAGGTCACTCGCCACCGGGAGTACTaGAATACCGGCACTCCATCC +
Preference number: 5 (lower is better)
Translates to: RGRDFLLTKTFLQYSKVTRHREY*NTGTPS
Trigger: GGATGGAGTGCCGGTATTCAAGTACTCCCGGTGGCG...AGTGACCTTCGAATACTGAAGAAAGGTCTTTGTGAGAAGAAAGTCCCTGCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CAA 90 bp TTGGGCTCTCTGCCTTCCACTCTTCAATACCCAAGGAACACTTCTTTGTATTCAGTCGACGTCGGTGACTaGGGCCAGGGATACCTGGCA +
Preference number: 5 (lower is better)
Translates to: LGSLPSTLQYPRNTSLYSVDVGD*GQGYLA
Trigger: TGCCAGGTATCCCTGGCCCAAGTCACCGACGTCGAC...TGAATACAAAGAAGTGTTCCTTGGGTATTGAAGAGTGGAAGGCAGAGAGCCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR CAA 90 bp AAGACCTTTCTTCAGTATTCGAAGGTCACTGTCTTGACCCGCAGGTACTCGTTCTTCTCAAAGGCATCCTaGGCTGCGGCCACTGCCTTG +
Preference number: 5 (lower is better)
Translates to: KTFLQYSKVTVLTRRYSFFSKAS*AAATAL
Trigger: CAAGGCAGTGGCCGCAGCCAAGGATGCCTTTGAGAA...GAACGAGTACCTGCGGGTCAAGACAGTGACCTTCGAATACTGAAGAAAGGTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CAA 90 bp CATCTTCCGCACCTCTTCTACCACTCTCCGCACGAACTCATCATGAATGGAGTCCTGACATACAGGGCCTaGTTGATGTCCCTGGTGAAG +
Preference number: 5 (lower is better)
Translates to: HLPHLFYHSPHELIMNGVLTYRA*LMSLVK
Trigger: CTTCACCAGGGACATCAACAAGGCCCTGTATGTCAG...GACTCCATTCATGATGAGTTCGTGCGGAGAGTGGTAGAAGAGGTGCGGAAGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CAA 90 bp CCTGCAGTCGCTGTCCCCAATAACTTTGGGCTCTCTGCCTTCCACTCTTCAATAGCTAGAAGCTGTACTTaGGATCCCGCTTCTGACACC +
Preference number: 5 (lower is better)
Translates to: PAVAVPNNFGLSAFHSSIARSCT*DPASDT
Trigger: GGTGTCAGAAGCGGGATCCAAAGTACAGCTTCTAGC...TATTGAAGAGTGGAAGGCAGAGAGCCCAAAGTTATTGGGGACAGCGACTGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511283.2
CDS-3UTR CAA 90 bp GAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGTGTTCAGCGTTGAGTaGAAAAATGTCAGTTTCTGT +
Preference number: 5 (lower is better)
Translates to: EALFSLGGAHLTQPRAASVFSVE*KNVSFC
Trigger: ACAGAAACTGACATTTTTCAACTCAACGCTGAACAC...AGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp TTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCGTGTTCAGCGTTGAGTaGAAAAATGTCAGTTTCTGT +
Preference number: 5 (lower is better)
Translates to: FRSFILPGRGTPHPAKGCVFSVE*KNVSFC
Trigger: ACAGAAACTGACATTTTTCAACTCAACGCTGAACAC...GCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp CTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGGGTGTTCAGCGTTGAGTaGAAAAATGTCAGTTTCTGT +
Preference number: 5 (lower is better)
Translates to: LLLTGQRASKMQTWCAGRVFSVE*KNVSFC
Trigger: ACAGAAACTGACATTTTTCAACTCAACGCTGAACAC...CCTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp CAGCCAAGGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGGTGTTCAGCGTTGAGTaGAAAAATGTCAGTTTCTGT +
Preference number: 5 (lower is better)
Translates to: QPRAASDWTEGVQDADMVVFSVE*KNVSFC
Trigger: ACAGAAACTGACATTTTTCAACTCAACGCTGAACAC...CACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp TCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTGTGTTCAGCGTTGAGTaGAAAAATGTCAGTTTCTGT +
Preference number: 5 (lower is better)
Translates to: SEALFSLGGAHLTQPRAAVFSVE*KNVSFC
Trigger: ACAGAAACTGACATTTTTCAACTCAACGCTGAACAC...AGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp GCAGGGACTTTCTTCTCACAAAGACCTTTCTTCAGTATTCGAAGGTCACTGTCTAGGATGAGTCCTGCTTaGGTGACCACCCCTGGCCGA +
Preference number: 5 (lower is better)
Translates to: AGTFFSQRPFFSIRRSLSRMSPA*VTTPGR
Trigger: TCGGCCAGGGGTGGTCACCAAAGCAGGACTCATCCT...AGACAGTGACCTTCGAATACTGAAGAAAGGTCTTTGTGAGAAGAAAGTCCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CAA 90 bp TCCAGGGACACCTTCTTCACGTTACTTATGGCACAGCTTTTCATGATGTGCTTGTTCTCAAAGGCATCCTaGGCTGCGGCCACTGCCTTG +
Preference number: 5 (lower is better)
Translates to: SRDTFFTLLMAQLFMMCLFSKAS*AAATAL
Trigger: CAAGGCAGTGGCCGCAGCCAAGGATGCCTTTGAGAA...CAAGCACATCATGAAAAGCTGTGCCATAAGTAACGTGAAGAAGGTGTCCCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455064.6
CDS-3UTR CAA 90 bp GTTGACAAACACAGTGCCTGCCTGGAGCTTGTCACTGACATACAGGGCCTTGTTGCCACGTCGGTCTTGTaGTACGTGTTGACAAACACA +
Preference number: 5 (lower is better)
Translates to: VDKHSACLELVTDIQGLVATSVL*YVLTNT
Trigger: TGTGTTTGTCAACACGTACAACAAGACCGACGTGGC...AACAAGGCCCTGTATGTCAGTGACAAGCTCCAGGCAGGCACTGTGTTTGTCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CAA 90 bp ATAACTTTGGGCTCTCTGCCTTCCACTCTTCAATACCCAAGGAACACTTCTTTGCAGCCTGCGCCCACTTaGGAAGCATCCCTTGGCTTC +
Preference number: 5 (lower is better)
Translates to: ITLGSLPSTLQYPRNTSLQPAPT*EASLGF
Trigger: GAAGCCAAGGGATGCTTCCAAAGTGGGCGCAGGCTG...CAAAGAAGTGTTCCTTGGGTATTGAAGAGTGGAAGGCAGAGAGCCCAAAGTTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS TCA 90 bp GACCCCTGGGGAAAGTCCACACTCTGTTCTAGCCTCAGGGCTTTCTaGATTCTGACTCTAAATCCACCTTCCAGGCTGAAATCCCAAATG +
Preference number: 5 (lower is better)
Translates to: DPWGKSTLCSSLRAF*ILTLNPPSRLKSQM
Trigger: CATTTGGGATTTCAGCCTGGAAGGTGGATTTAGAGTCAGAATTCAGAAAGCCCTGAGGCTAGAACAGAGTGTGGACTTTCCCCAGGGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462808.1
CDS TCA 90 bp CCTGACACCAGAGCCCATGCCTCCAAACTCCAAGTCTGGGACTCCTaGTTAAATTCCGTCTCTGTCTGCACTTTGGGAAGATTCTTTCCT +
Preference number: 5 (lower is better)
Translates to: PDTRAHASKLQVWDS*LNSVSVCTLGRFFP
Trigger: AGGAAAGAATCTTCCCAAAGTGCAGACAGAGACGGAATTTAATCAGGAGTCCCAGACTTGGAGTTTGGAGGCATGGGCTCTGGTGTCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472186.5
CDS GCA 90 bp CACCTGCCATATGAACAAGGGAGTCAGCGTGAACCTAACTTCTATTaGACAACGGACACAGACCCGTCCTCTCTACCTGGCAAAGGTTTA +
Preference number: 5 (lower is better)
Translates to: HLPYEQGSQREPNFY*TTDTDPSSLPGKGL
Trigger: TAAACCTTTGCCAGGTAGAGAGGACGGGTCTGTGTCCGTTGTGCAATAGAAGTTAGGTTCACGCTGACTCCCTTGTTCATATGGCAGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476245.5
CDS CCA 90 bp CTTGTTGGACAGTGCAGCTTCAAGGAGTATTTGAGTTGCTTGCCGTaGGAAGCACAGGTAAGCTCCCTCTCTGTACCACTAAATCTCCAG +
Preference number: 5 (lower is better)
Translates to: LVGQCSFKEYLSCLP*EAQVSSLSVPLNLQ
Trigger: CTGGAGATTTAGTGGTACAGAGAGGGAGCTTACCTGTGCTTCCCACGGCAAGCAACTCAAATACTCCTTGAAGCTGCACTGTCCAACAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476245.5
CDS-3UTR CAA 90 bp CTCCTTGGCTATGAACATGTGGTCTTCCACGTCTGTGAAAACAGTTGGCTCAAAGACGCGGCCCCTGACTaGAAGAAATCAGTGGAGTCT +
Preference number: 5 (lower is better)
Translates to: LLGYEHVVFHVCENSWLKDAAPD*KKSVES
Trigger: AGACTCCACTGATTTCTTCAAGTCAGGGGCCGCGTC...TTTGAGCCAACTGTTTTCACAGACGTGGAAGACCACATGTTCATAGCCAAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CAA 90 bp CTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGGATGCAATTCTCTCCTTaGTTGAAGAAAACAGAACTC +
Preference number: 5 (lower is better)
Translates to: LLLTGQRASKMQTWCAGRMQFSP*LKKTEL
Trigger: GAGTTCTGTTTTCTTCAACAAAGGAGAGAATTGCAT...CCTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp CAGCCAAGGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGATGCAATTCTCTCCTTaGTTGAAGAAAACAGAACTC +
Preference number: 5 (lower is better)
Translates to: QPRAASDWTEGVQDADMVMQFSP*LKKTEL
Trigger: GAGTTCTGTTTTCTTCAACAAAGGAGAGAATTGCAT...CACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CAA 90 bp GCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGATGCAATTCTCTCCTTaGTTGAAGAAAACAGAACTC +
Preference number: 5 (lower is better)
Translates to: AASDWTEGVQDADMVCRQMQFSP*LKKTEL
Trigger: GAGTTCTGTTTTCTTCAACAAAGGAGAGAATTGCAT...CTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS TCA 90 bp AGGGGATTCTGGCTGCCAGACATGAACTGCCCCCATTGTAGCTCATaGCTCTGGGCTACTCTAGTGTCTGCCTCAGATTTACTGTATTTA +
Preference number: 5 (lower is better)
Translates to: RGFWLPDMNCPHCSS*LWATLVSASDLLYL
Trigger: TAAATACAGTAAATCTGAGGCAGACACTAGAGTAGCCCAGAGTCATGAGCTACAATGGGGGCAGTTCATGTCTGGCAGCCAGAATCCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484724.5
CDS GCA 90 bp ACTGACCAGACTTGCCTGGTACACAGCAGTCACCCAAGAAACACCTaGCATATGAACAAGGGAGTCAGCGTGAACCTAACTTCTATTGCA +
Preference number: 5 (lower is better)
Translates to: TDQTCLVHSSHPRNT*HMNKGVSVNLTSIA
Trigger: TGCAATAGAAGTTAGGTTCACGCTGACTCCCTTGTTCATATGGCAGGTGTTTCTTGGGTGACTGCTGTGTACCAGGCAAGTCTGGTCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476245.5
CDS CCA 90 bp CATGTGAGAAGGAGTAGTAGAGTGCATATGAACAGGAAGCTACCATaGCCAAGACCAGCATCACGGCTTTGGAGCCAGAATTTCAGAGTC +
Preference number: 5 (lower is better)
Translates to: HVRRSSRVHMNRKLP*PRPASRLWSQNFRV
Trigger: GACTCTGAAATTCTGGCTCCAAAGCCGTGATGCTGGTCTTGGCCATGGTAGCTTCCTGTTCATATGCACTCTACTACTCCTTCTCACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484724.5
CDS-3UTR CAA 90 bp CTTGAATACCGGCACTCCATCCTTCTCAGCTTCCAGACAGTGGCAGCTGCTTCCGTGTTCAGCGTTGAGTaGAAAAATGTCAGTTTCTGT +
Preference number: 5 (lower is better)
Translates to: LEYRHSILLSFQTVAAASVFSVE*KNVSFC
Trigger: ACAGAAACTGACATTTTTCAACTCAACGCTGAACAC...GGAAGCAGCTGCCACTGTCTGGAAGCTGAGAAGGATGGAGTGCCGGTATTCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR CAA 90 bp TTGGGCTCTCTGCCTTCCACTCTTCAATACCCAAGGAACACTTCTTTGTATTCAGACGCGGCCCCTGACTaGAAGAAATCAGTGGAGTCT +
Preference number: 5 (lower is better)
Translates to: LGSLPSTLQYPRNTSLYSDAAPD*KKSVES
Trigger: AGACTCCACTGATTTCTTCAAGTCAGGGGCCGCGTC...TGAATACAAAGAAGTGTTCCTTGGGTATTGAAGAGTGGAAGGCAGAGAGCCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS GCA 90 bp CATCACGGCTTTGGAGCCAGAATTTCAGAGTCTGAATCCCAGCTCTaGCACGGGCTAGCTTGGATGATCCTGGACAAGTTATTTAAATCT +
Preference number: 5 (lower is better)
Translates to: HHGFGARISESESQL*HGLAWMILDKLFKS
Trigger: AGATTTAAATAACTTGTCCAGGATCATCCAAGCTAGCCCGTGGCAGAGCTGGGATTCAGACTCTGAAATTCTGGCTCCAAAGCCGTGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484724.5
CDS-3UTR CAA 90 bp TCCAGGGACACCTTCTTCACGTTACTTATGGCACAGCTTTTCATGATGTGCTTGCCAAAGCCTGGTATTTaGCCACCACATCAGGCAAAG +
Preference number: 5 (lower is better)
Translates to: SRDTFFTLLMAQLFMMCLPKPGI*PPHQAK
Trigger: CTTTGCCTGATGTGGTGGCAAAATACCAGGCTTTGG...CAAGCACATCATGAAAAGCTGTGCCATAAGTAACGTGAAGAAGGTGTCCCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455064.6
CDS-3UTR CAA 90 bp CTCCTTGGCTATGAACATGTGGTCTTCCACGTCTGTGAAAACAGTTGGCTCAAAACGTTAACCACACCTTaGGGAATGCCGGCCTTTAAT +
Preference number: 5 (lower is better)
Translates to: LLGYEHVVFHVCENSWLKTLTTP*GMPAFN
Trigger: ATTAAAGGCCGGCATTCCCAAAGGTGTGGTTAACGT...TTTGAGCCAACTGTTTTCACAGACGTGGAAGACCACATGTTCATAGCCAAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CAA 90 bp GGCCCGAAGGACTCCTCCTTGGCTATGAACATGTGGTCTTCCACGTCTGTGAAAATGCAATTCTCTCCTTaGTTGAAGAAAACAGAACTC +
Preference number: 5 (lower is better)
Translates to: GPKDSSLAMNMWSSTSVKMQFSP*LKKTEL
Trigger: GAGTTCTGTTTTCTTCAACAAAGGAGAGAATTGCAT...TTTCACAGACGTGGAAGACCACATGTTCATAGCCAAGGAGGAGTCCTTCGGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS GCA 90 bp GTTACTGGGAGATTAAATACAATTGTCCTCAAGTCCTTACAACAATaGCTGGCATGGAGCAGGTGCTCAAGAAGCACATGGATGGCTGTT +
Preference number: 5 (lower is better)
Translates to: VTGRLNTIVLKSLQQ*LAWSRCSRSTWMAV
Trigger: AACAGCCATCCATGTGCTTCTTGAGCACCTGCTCCATGCCAGGCATTGTTGTAAGGACTTGAGGACAATTGTATTTAATCTCCCAGTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476245.5
CDS GCA 90 bp TCTTGCAACTGCATATATCAATCTTGGATACCCAAAACACTACATTaGAGACATCAACAGCAGCCTAGACCTTCTGACAGGGGAGCATGG +
Preference number: 5 (lower is better)
Translates to: SCNCIYQSWIPKTLH*RHQQQPRPSDRGAW
Trigger: CCATGCTCCCCTGTCAGAAGGTCTAGGCTGCTGTTGATGTCTGCAATGTAGTGTTTTGGGTATCCAAGATTGATATATGCAGTTGCAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484724.5
CDS GCA 90 bp ACAAAAAGAGTTATGGATAAGCTCATGGGTGGGTGCATGTCACTGTaGGTTAAGAGTGGCTGTGTAAGAATGGTACTCTGTATGCATGCT +
Preference number: 5 (lower is better)
Translates to: TKRVMDKLMGGCMSL*VKSGCVRMVLCMHA
Trigger: AGCATGCATACAGAGTACCATTCTTACACAGCCACTCTTAACGCACAGTGACATGCACCCACCCATGAGCTTATCCATAACTCTTTTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484724.5
CDS GCA 90 bp AAAAACACATGTACAAAAAGAGTTATGGATAAGCTCATGGGTGGGTaGATGTCACTGTGCGTTAAGAGTGGCTGTGTAAGAATGGTACTC +
Preference number: 5 (lower is better)
Translates to: KNTCTKRVMDKLMGG*MSLCVKSGCVRMVL
Trigger: GAGTACCATTCTTACACAGCCACTCTTAACGCACAGTGACATGCACCCACCCATGAGCTTATCCATAACTCTTTTTGTACATGTGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000484724.5
CDS CCA 90 bp CCTGACCACAGACAGATATTCTCTTGCAACTGCATATATCAATCTTaGATACCCAAAACACTACATTGCAGACATCAACAGCAGCCTAGA +
Preference number: 5 (lower is better)
Translates to: PDHRQIFSCNCIYQS*IPKTLHCRHQQQPR
Trigger: TCTAGGCTGCTGTTGATGTCTGCAATGTAGTGTTTTGGGTATCCAAGATTGATATATGCAGTTGCAAGAGAATATCTGTCTGTGGTCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484724.5
CDS TCA 90 bp TGTACCACTAAATCTCCAGCAACTCTACTTTGTTCACTATTTTTGTaGGCTGGTCAATCTGTGGGGAAGACAAGTTTAACACAACCGAAA +
Preference number: 5 (lower is better)
Translates to: CTTKSPATLLCSLFL*AGQSVGKTSLTQPK
Trigger: TTTCGGTTGTGTTAAACTTGTCTTCCCCACAGATTGACCAGCTCACAAAAATAGTGAACAAAGTAGAGTTGCTGGAGATTTAGTGGTACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476245.5
CDS CCA 72 bp GCCGAGTGGGGGCGGCGCTCACCGGTGGTGGGACTATaGCGGGAGCGCAGCGCACCCTCTCCGGGCGGGTCT +
Preference number: 6 (lower is better)
Translates to: AEWGRRSPVVGL*RERSAPSPGGS
Trigger: AGACCCGCCCGGAGAGGGTGCGCTGCGCTCCCGCCATAGTCCCACCACCGGTGAGCGCCGCCCCCACTCGGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000455064.6
ENST00000460368.5
CDS CCA 72 bp GAGAGTCAGCCGAGTGGGGGCGGCGCTCACCGGTGGTaGGACTATGGCGGGAGCGCAGCGCACCCTCTCCGG +
Preference number: 6 (lower is better)
Translates to: ESQPSGGGAHRW*DYGGSAAHPLR
Trigger: CCGGAGAGGGTGCGCTGCGCTCCCGCCATAGTCCCACCACCGGTGAGCGCCGCCCCCACTCGGCTGACTCTC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000455064.6
ENST00000460368.5
CDS CCA 72 bp GCGGAGAGTCAGCCGAGTGGGGGCGGCGCTCACCGGTaGTGGGACTATGGCGGGAGCGCAGCGCACCCTCTC +
Preference number: 6 (lower is better)
Translates to: AESQPSGGGAHR*WDYGGSAAHPL
Trigger: GAGAGGGTGCGCTGCGCTCCCGCCATAGTCCCACCACCGGTGAGCGCCGCCCCCACTCGGCTGACTCTCCGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000455064.6
ENST00000460368.5
CDS GCA 72 bp CCCAGCGGCGAAGTTGATGGGCCCCGCAGGAGCCCTTaGGGTGAGAACCGAGTCCTGGAGCCCCTGGAGCCC +
Preference number: 6 (lower is better)
Translates to: PSGEVDGPRRSP*GENRVLEPLEP
Trigger: GGGCTCCAGGGGCTCCAGGACTCGGTTCTCACCGCAAGGGCTCCTGCGGGGCCCATCAACTTCGCCGCTGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460368.5
CDS CCA 72 bp TTGCAGAGGCGGCCCCTTAGCAGCTGCGCATCCGGGTaGATAGCGGCGCTTCTGCCCGCCCAGTGCCTACCC +
Preference number: 6 (lower is better)
Translates to: LQRRPLSSCASG*IAALLPAQCLP
Trigger: GGGTAGGCACTGGGCGGGCAGAAGCGCCGCTATCCACCCGGATGCGCAGCTGCTAAGGGGCCGCCTCTGCAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273450.7
CDS GCA 72 bp ATTTGCAGCCGCTTGCAGAGGCGGCCCCTTAGCAGCTaGGCATCCGGGTGGATAGCGGCGCTTCTGCCCGCC +
Preference number: 6 (lower is better)
Translates to: ICSRLQRRPLSS*ASGWIAALLPA
Trigger: GGCGGGCAGAAGCGCCGCTATCCACCCGGATGCGCAGCTGCTAAGGGGCCGCCTCTGCAAGCGGCTGCAAAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273450.7
CDS GCA 72 bp CTCCTTCCCTCCTGCTGCATGCCTGGACAGCACCTCTaGCTGTGGCCGTCCCTGCCAGCCTGTCCTCGGGCA +
Preference number: 6 (lower is better)
Translates to: LLPSCCMPGQHL*LWPSLPACPRA
Trigger: TGCCCGAGGACAGGCTGGCAGGGACGGCCACAGGCAGAGGTGCTGTCCAGGCATGCAGCAGGAGGGAAGGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476245.5
CDS GCA 72 bp GCATCCGGGTGGATAGCGGCGCTTCTGCCCGCCCAGTaGCTACCCGCCTCTCCGAGAGAAAAACAGCCCCTG +
Preference number: 6 (lower is better)
Translates to: ASGWIAALLPAQ*LPASPREKQPL
Trigger: CAGGGGCTGTTTTTCTCTCGGAGAGGCGGGTAGGCACTGGGCGGGCAGAAGCGCCGCTATCCACCCGGATGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273450.7
CDS CCA 72 bp AGGTGCCACCACACCAGAGAGGCCCCCAGTGCCTCCTaGCTGGAGTGTCTCCTCCAGGCCCCTCTTCTTGCC +
Preference number: 6 (lower is better)
Translates to: RCHHTREAPSAS*LECLLQAPLLA
Trigger: GGCAAGAAGAGGGGCCTGGAGGAGACACTCCAGCCAGGAGGCACTGGGGGCCTCTCTGGTGTGGTGGCACCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467370.5
CDS CCA 72 bp CGCCTCACTCTGGTAGGCCGGACACAGCAACACGGCTaGGGGTACCACGCCCATGGGGTTTGTCCGGACCCT +
Preference number: 6 (lower is better)
Translates to: RLTLVGRTQQHG*GYHAHGVCPDP
Trigger: AGGGTCCGGACAAACCCCATGGGCGTGGTACCCCCAGCCGTGTTGCTGTGTCCGGCCTACCAGAGTGAGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484724.5
CDS CAA 72 bp GAAAGGAGACGCTGCCCTCCGGGAATTTGCAGCCGCTaGCAGAGGCGGCCCCTTAGCAGCTGCGCATCCGGG +
Preference number: 6 (lower is better)
Translates to: ERRRCPPGICSR*QRRPLSSCASG
Trigger: CCCGGATGCGCAGCTGCTAAGGGGCCGCCTCTGCAAGCGGCTGCAAATTCCCGGAGGGCAGCGTCTCCTTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273450.7
CDS CAA 90 bp CAGCAGAGCGAAAGGAGACGCTGCCCTCCGGGAATTTGCAGCCGCTaGCAGAGGCGGCCCCTTAGCAGCTGCGCATCCGGGTGGATAGCG +
Preference number: 6 (lower is better)
Translates to: QQSERRRCPPGICSR*QRRPLSSCASGWIA
Trigger: CGCTATCCACCCGGATGCGCAGCTGCTAAGGGGCCGCCTCTGCAAGCGGCTGCAAATTCCCGGAGGGCAGCGTCTCCTTTCGCTCTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273450.7
CDS CAA 90 bp AGGCCGGACACAGCAACACGGCTGGGGGTACCACGCCCATGGGGTTaGTCCGGACCCTGTCAGTGTGTGGGAAGATCCCTGCCTGCCCTC +
Preference number: 6 (lower is better)
Translates to: RPDTATRLGVPRPWG*SGPCQCVGRSLPAL
Trigger: GAGGGCAGGCAGGGATCTTCCCACACACTGACAGGGTCCGGACAAACCCCATGGGCGTGGTACCCCCAGCCGTGTTGCTGTGTCCGGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484724.5
CDS GCA 72 bp AAAGGAGACGCTGCCCTCCGGGAATTTGCAGCCGCTTaGAGAGGCGGCCCCTTAGCAGCTGCGCATCCGGGT +
Preference number: 6 (lower is better)
Translates to: KGDAALREFAAA*RGGPLAAAHPG
Trigger: ACCCGGATGCGCAGCTGCTAAGGGGCCGCCTCTGCAAGCGGCTGCAAATTCCCGGAGGGCAGCGTCTCCTTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273450.7
CDS GCA 72 bp CAGCAGAGCGAAAGGAGACGCTGCCCTCCGGGAATTTaGAGCCGCTTGCAGAGGCGGCCCCTTAGCAGCTGC +
Preference number: 6 (lower is better)
Translates to: QQSERRRCPPGI*SRLQRRPLSSC
Trigger: GCAGCTGCTAAGGGGCCGCCTCTGCAAGCGGCTGCAAATTCCCGGAGGGCAGCGTCTCCTTTCGCTCTGCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273450.7
CDS CCA 72 bp CCCTCTGAGGTCCTGAGTCTGCCCAGGCAGGCTGCTTaGAAGGCTTGGCTTGTGGGCCTGTCCCAGGAGGGT +
Preference number: 6 (lower is better)
Translates to: PSEVLSLPRQAA*KAWLVGLSQEG
Trigger: ACCCTCCTGGGACAGGCCCACAAGCCAAGCCTTCCAAGCAGCCTGCCTGGGCAGACTCAGGACCTCAGAGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467370.5
CDS CCA 72 bp GCTCCCGCAGGCTGTGCTACAGTTCCGTGTACTGCATaGAAAGCACCGCGAGGCTGCACCTCGCCCTGGGCA +
Preference number: 6 (lower is better)
Translates to: APAGCATVPCTA*KAPRGCTSPWA
Trigger: TGCCCAGGGCGAGGTGCAGCCTCGCGGTGCTTTCCATGCAGTACACGGAACTGTAGCACAGCCTGCGGGAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476245.5
CDS CCA 72 bp TGTGCAGACCTTGCCCGATGTCCTCTGTGGGGACCCTaGAGGCGATGCCTCCACCTGCAGCCTGGCTCCTCT +
Preference number: 6 (lower is better)
Translates to: CADLARCPLWGP*RRCLHLQPGSS
Trigger: AGAGGAGCCAGGCTGCAGGTGGAGGCATCGCCTCCAGGGTCCCCACAGAGGACATCGGGCAAGGTCTGCACA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476245.5
CDS TCA 72 bp AGTTGGTGCGGGCGTCCCGGGCAGGTTAGACTTCTGTaGGCCGCAGCCCCGAAACTGAGGTTGGTGCAGACC +
Preference number: 6 (lower is better)
Translates to: SWCGRPGQVRLL*AAAPKLRLVQT
Trigger: GGTCTGCACCAACCTCAGTTTCGGGGCTGCGGCTCACAGAAGTCTAACCTGCCCGGGACGCCCGCACCAACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000460368.5
ENST00000493803.5
CDS TCA 72 bp GAGCCCTGTACATCAGCCGGCCCCGGTCCCGCGCACTaGTCTTCCCCCACCGTCCATTCTCAAAGGCATCCT +
Preference number: 6 (lower is better)
Translates to: EPCTSAGPGPAH*SSPTVHSQRHP
Trigger: AGGATGCCTTTGAGAATGGACGGTGGGGGAAGATCAGTGCGCGGGACCGGGGCCGGCTGATGTACAGGGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS GCA 72 bp GACCCCGCCTGCTATGTGCCGGTGGACCCCGCCTGCTaGCGCCTGAGTAACTTCACCTCTACTGGGAGACTT +
Preference number: 6 (lower is better)
Translates to: DPACYVPVDPAC*RLSNFTSTGRL
Trigger: AAGTCTCCCAGTAGAGGTGAAGTTACTCAGGCGGCAGCAGGCGGGGTCCACCGGCACATAGCAGGCGGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467370.5
CDS GCA 72 bp GTGAGCTCCCGCAGGCTGTGCTACAGTTCCGTGTACTaGATGGAAAGCACCGCGAGGCTGCACCTCGCCCTG +
Preference number: 6 (lower is better)
Translates to: VSSRRLCYSSVY*MESTARLHLAL
Trigger: CAGGGCGAGGTGCAGCCTCGCGGTGCTTTCCATGCAGTACACGGAACTGTAGCACAGCCTGCGGGAGCTCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476245.5
CDS GCA 72 bp GGTGCCTCACGCCAGGTTCATTTCCCGGCGCCTACATaGTTGGCATCCAGCGGGGTCCGAACTCCTCCTGCT +
Preference number: 6 (lower is better)
Translates to: GASRQVHFPAPT*LASSGVRTPPA
Trigger: AGCAGGAGGAGTTCGGACCCCGCTGGATGCCAAGCATGTAGGCGCCGGGAAATGAACCTGGCGTGAGGCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476245.5
CDS GCA 72 bp GCTCAGACCCCTGTGGCTGGTGCCCTGTCCTCCAGCTaGAGCAAGGGCTGGATGATAACGGCCTGCACTGTC +
Preference number: 6 (lower is better)
Translates to: AQTPVAGALSSS*SKGWMITACTV
Trigger: GACAGTGCAGGCCGTTATCATCCAGCCCTTGCTGCAGCTGGAGGACAGGGCACCAGCCACAGGGGTCTGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484724.5
CDS CCA 72 bp GAGCATGAGCCTGGCCAGGGCAGGCACGCATCTGTCTaGGTCCTATTACAGCCCCGGTGCCAAGCACAGTGC +
Preference number: 6 (lower is better)
Translates to: EHEPGQGRHASV*VLLQPRCQAQC
Trigger: GCACTGTGCTTGGCACCGGGGCTGTAATAGGACCCAGACAGATGCGTGCCTGCCCTGGCCAGGCTCATGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467370.5
CDS CCA 72 bp CAGGGCCCTGAGGCCCCAGGCCTTGGCAGTGCTATGTaGCTGGTGCATCTCAGCCCCATGACAAGTGTGAGG +
Preference number: 6 (lower is better)
Translates to: QGPEAPGLGSAM*LVHLSPMTSVR
Trigger: CCTCACACTTGTCATGGGGCTGAGATGCACCAGCCACATAGCACTGCCAAGGCCTGGGGCCTCAGGGCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467370.5
CDS CCA 72 bp CCTCACGCCAGGTTCATTTCCCGGCGCCTACATGCTTaGCATCCAGCGGGGTCCGAACTCCTCCTGCTGAGC +
Preference number: 6 (lower is better)
Translates to: PHARFISRRLHA*HPAGSELLLLS
Trigger: GCTCAGCAGGAGGAGTTCGGACCCCGCTGGATGCCAAGCATGTAGGCGCCGGGAAATGAACCTGGCGTGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476245.5
CDS CCA 72 bp GCAGGGCTGGCAGTTCTGAGCGCTGGCAAGGCTAAGTaGGTCAGAGGAGACCCTCGCCAAGCCGGTGACTCA +
Preference number: 6 (lower is better)
Translates to: AGLAVLSAGKAK*VRGDPRQAGDS
Trigger: TGAGTCACCGGCTTGGCGAGGGTCTCCTCTGACCCACTTAGCCTTGCCAGCGCTCAGAACTGCCAGCCCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488356.5
CDS CCA 72 bp CCGGACACAGCAACACGGCTGGGGGTACCACGCCCATaGGGTTTGTCCGGACCCTGTCAGTGTGTGGGAAGA +
Preference number: 6 (lower is better)
Translates to: PDTATRLGVPRP*GLSGPCQCVGR
Trigger: TCTTCCCACACACTGACAGGGTCCGGACAAACCCCATGGGCGTGGTACCCCCAGCCGTGTTGCTGTGTCCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484724.5
CDS CAA 72 bp CAGGTGGCAGGGACCTGGGTAGGCCCAAAGCATGCTTaGCTGCAAGAAGCAAGACCCGGCCAGTGCCTCCCC +
Preference number: 6 (lower is better)
Translates to: QVAGTWVGPKHA*LQEARPGQCLP
Trigger: GGGGAGGCACTGGCCGGGTCTTGCTTCTTGCAGCAAAGCATGCTTTGGGCCTACCCAGGTCCCTGCCACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467370.5
CDS CAA 72 bp GCCTCACGCCAGGTTCATTTCCCGGCGCCTACATGCTaGGCATCCAGCGGGGTCCGAACTCCTCCTGCTGAG +
Preference number: 6 (lower is better)
Translates to: ASRQVHFPAPTC*ASSGVRTPPAE
Trigger: CTCAGCAGGAGGAGTTCGGACCCCGCTGGATGCCAAGCATGTAGGCGCCGGGAAATGAACCTGGCGTGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476245.5
CDS TCA 72 bp CCAACCTGTACATCAGCCGGCCCCGGTCCCGCGCACTaGTCTTCCCCCACCGTCCATTCTCAAAGGCATCCT +
Preference number: 6 (lower is better)
Translates to: PTCTSAGPGPAH*SSPTVHSQRHP
Trigger: AGGATGCCTTTGAGAATGGACGGTGGGGGAAGATCAGTGCGCGGGACCGGGGCCGGCTGATGTACAGGTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000472186.5
ENST00000476245.5
CDS TCA 72 bp TGGTCAAGGTCAGGTTGCGGTTGGGTCTGGCCTGGTTaGTGGGGATGGTGGAGCCCTGTACATCAGCCGGCC +
Preference number: 6 (lower is better)
Translates to: WSRSGCGWVWPG*WGWWSPVHQPA
Trigger: GGCCGGCTGATGTACAGGGCTCCACCATCCCCATCAACCAGGCCAGACCCAACCGCAACCTGACCTTGACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS TCA 72 bp GCTCCACGACCAAAGCTGGTTCCCCCAAGGACCTGCTaGACCCTCAGCCAGAAACACGGGCCCCTGGGTCTT +
Preference number: 6 (lower is better)
Translates to: APRPKLVPPRTC*TLSQKHGPLGL
Trigger: AAGACCCAGGGGCCCGTGTTTCTGGCTGAGGGTTCAGCAGGTCCTTGGGGGAACCAGCTTTGGTCGTGGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467370.5
CDS GCA 72 bp CATGTGCTACGGACACAGCAGAGCGAAAGGAGACGCTaGCCTCCGGGAATTTGCAGCCGCTTGCAGAGGCGG +
Preference number: 6 (lower is better)
Translates to: HVLRTQQSERRR*PPGICSRLQRR
Trigger: CCGCCTCTGCAAGCGGCTGCAAATTCCCGGAGGGCAGCGTCTCCTTTCGCTCTGCTGTGTCCGTAGCACATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273450.7
CDS GCA 72 bp AGGCACGCATCTGTCTGGGTCCTATTACAGCCCCGGTaGCAAGCACAGTGCCTGCACGCAGCTGGTGCTGCA +
Preference number: 6 (lower is better)
Translates to: RHASVWVLLQPR*QAQCLHAAGAA
Trigger: TGCAGCACCAGCTGCGTGCAGGCACTGTGCTTGGCACCGGGGCTGTAATAGGACCCAGACAGATGCGTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467370.5
CDS GCA 72 bp ACCCCAGGTGGCAGGGACCTGGGTAGGCCCAAAGCATaGTTTGCTGCAAGAAGCAAGACCCGGCCAGTGCCT +
Preference number: 6 (lower is better)
Translates to: TPGGRDLGRPKA*FAARSKTRPVP
Trigger: AGGCACTGGCCGGGTCTTGCTTCTTGCAGCAAAGCATGCTTTGGGCCTACCCAGGTCCCTGCCACCTGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467370.5
CDS GCA 72 bp ACAGTTCCGTGTACTGCATGGAAAGCACCGCGAGGCTaGACCTCGCCCTGGGCAGGAACTCACCCAACAGGC +
Preference number: 6 (lower is better)
Translates to: TVPCTAWKAPRG*TSPWAGTHPTG
Trigger: GCCTGTTGGGTGAGTTCCTGCCCAGGGCGAGGTGCAGCCTCGCGGTGCTTTCCATGCAGTACACGGAACTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476245.5
CDS GCA 72 bp TCTTTGCAGGTCTCTGGACAGATGCTGTGGGTGCCCTaGTCAGACCCCTGTGGCTGGTGCCCTGTCCTCCAG +
Preference number: 6 (lower is better)
Translates to: SLQVSGQMLWVP*SDPCGWCPVLQ
Trigger: CTGGAGGACAGGGCACCAGCCACAGGGGTCTGAGCAGGGCACCCACAGCATCTGTCCAGAGACCTGCAAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484724.5
CDS GCA 72 bp TCCTGTCTTTGCAGGTCTCTGGACAGATGCTGTGGGTaGCCTGCTCAGACCCCTGTGGCTGGTGCCCTGTCC +
Preference number: 6 (lower is better)
Translates to: SCLCRSLDRCCG*PAQTPVAGALS
Trigger: GGACAGGGCACCAGCCACAGGGGTCTGAGCAGGGCACCCACAGCATCTGTCCAGAGACCTGCAAAGACAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484724.5
CDS CCA 72 bp GGTCTTCATGGCCAACTCCTCCCTGCTATGCAGGTCTaGGTAGCACAGGTGCCACCACACCAGAGAGGCCCC +
Preference number: 6 (lower is better)
Translates to: GLHGQLLPAMQV*VAQVPPHQRGP
Trigger: GGGGCCTCTCTGGTGTGGTGGCACCTGTGCTACCCAGACCTGCATAGCAGGGAGGAGTTGGCCATGAAGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467370.5
CDS CCA 72 bp CCAGCCTACACATGCGTGCATGTGAGTCCAGCCCTGTaGGCACACATGGGCCCCTCTCATGGGTACCCTTGG +
Preference number: 6 (lower is better)
Translates to: PAYTCVHVSPAL*AHMGPSHGYPW
Trigger: CCAAGGGTACCCATGAGAGGGGCCCATGTGTGCCCACAGGGCTGGACTCACATGCACGCATGTGTAGGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467370.5
CDS CCA 72 bp CACCGCCTTGTCTGGACAGTGGGAAGCCCCTTCAGGTaGAAGGGGGTGGAGAGACTTGGCGTTACTGCCCAG +
Preference number: 6 (lower is better)
Translates to: HRLVWTVGSPFR*KGVERLGVTAQ
Trigger: CTGGGCAGTAACGCCAAGTCTCTCCACCCCCTTCCACCTGAAGGGGCTTCCCACTGTCCAGACAAGGCGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467370.5
CDS CAA 72 bp CTGGTCAAGGTCAGGTTGCGGTTGGGTCTGGCCTGGTaGATGGGGATGGTGGAGCCCTGTACATCAGCCGGC +
Preference number: 6 (lower is better)
Translates to: LVKVRLRLGLAW*MGMVEPCTSAG
Trigger: GCCGGCTGATGTACAGGGCTCCACCATCCCCATCAACCAGGCCAGACCCAACCGCAACCTGACCTTGACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS CAA 72 bp ACAGCAACACGGCTGGGGGTACCACGCCCATGGGGTTaGTCCGGACCCTGTCAGTGTGTGGGAAGATCCCTG +
Preference number: 6 (lower is better)
Translates to: TATRLGVPRPWG*SGPCQCVGRSL
Trigger: CAGGGATCTTCCCACACACTGACAGGGTCCGGACAAACCCCATGGGCGTGGTACCCCCAGCCGTGTTGCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484724.5
CDS CAA 90 bp AGCCTCACGGCCATCCCTTTGATGCCTTCAGGGAAGAGGAAGCGGTaGTACAGCGTGCTCACGGTGTCGTCCGGGAGCACCTCACACTCC +
Preference number: 6 (lower is better)
Translates to: SLTAIPLMPSGKRKR*YSVLTVSSGSTSHS
Trigger: GGAGTGTGAGGTGCTCCCGGACGACACCGTGAGCACGCTGTACAACCGCTTCCTCTTCCCTGAAGGCATCAAAGGGATGGCCGTGAGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484724.5
CDS TCA 72 bp CCTGCTATGTGCCGGTGGACCCCGCCTGCTGCCGCCTaGGTAACTTCACCTCTACTGGGAGACTTGCAACAC +
Preference number: 6 (lower is better)
Translates to: PAMCRWTPPAAA*VTSPLLGDLQH
Trigger: GTGTTGCAAGTCTCCCAGTAGAGGTGAAGTTACTCAGGCGGCAGCAGGCGGGGTCCACCGGCACATAGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467370.5
CDS GCA 72 bp TTGGAAGGCTTGGCTTGTGGGCCTGTCCCAGGAGGGTaGTGGTCCTCTCAGCAGGACATGGGGACTAGGGTT +
Preference number: 6 (lower is better)
Translates to: LEGLACGPVPGG*WSSQQDMGTRV
Trigger: AACCCTAGTCCCCATGTCCTGCTGAGAGGACCAGCACCCTCCTGGGACAGGCCCACAAGCCAAGCCTTCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467370.5
CDS GCA 72 bp GGACCTGAGGCAGTGATGAAGGTGTCCCACAAGGGGTaGTGTGCTGGGCGCTCCAGCCTTGTCTCCAACCAT +
Preference number: 6 (lower is better)
Translates to: GPEAVMKVSHKG*CAGRSSLVSNH
Trigger: ATGGTTGGAGACAAGGCTGGAGCGCCCAGCACAGCACCCCTTGTGGGACACCTTCATCACTGCCTCAGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476245.5
CDS GCA 72 bp ATGCACGCACAGGGTGCTGTGAGCTCCCGCAGGCTGTaGTACAGTTCCGTGTACTGCATGGAAAGCACCGCG +
Preference number: 6 (lower is better)
Translates to: MHAQGAVSSRRL*YSSVYCMESTA
Trigger: CGCGGTGCTTTCCATGCAGTACACGGAACTGTAGCACAGCCTGCGGGAGCTCACAGCACCCTGTGCGTGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476245.5
CDS CCA 72 bp AGGAGAGGCCTCCTCTGCAGAAGCAACCCAGGGAGATaGCACCCATCTCAGCTGCAGGTCTGTGTGACACGG +
Preference number: 6 (lower is better)
Translates to: RRGLLCRSNPGR*HPSQLQVCVTR
Trigger: CCGTGTCACACAGACCTGCAGCTGAGATGGGTGCCATCTCCCTGGGTTGCTTCTGCAGAGGAGGCCTCTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467370.5
CDS CCA 72 bp CAGGTAGGGGCATTGGGACCCCAGGTGGCAGGGACCTaGGTAGGCCCAAAGCATGCTTTGCTGCAAGAAGCA +
Preference number: 6 (lower is better)
Translates to: QVGALGPQVAGT*VGPKHALLQEA
Trigger: TGCTTCTTGCAGCAAAGCATGCTTTGGGCCTACCCAGGTCCCTGCCACCTGGGGTCCCAATGCCCCTACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467370.5
CDS CCA 72 bp AACCCTCAGCCAGAAACACGGGCCCCTGGGTCTTCATaGCCAACTCCTCCCTGCTATGCAGGTCTGGGTAGC +
Preference number: 6 (lower is better)
Translates to: NPQPETRAPGSS*PTPPCYAGLGS
Trigger: GCTACCCAGACCTGCATAGCAGGGAGGAGTTGGCCATGAAGACCCAGGGGCCCGTGTTTCTGGCTGAGGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467370.5
CDS CCA 72 bp GGGAAGCCCCTTCAGGTGGAAGGGGGTGGAGAGACTTaGCGTTACTGCCCAGACTCACTGGCCCATCTCTTC +
Preference number: 6 (lower is better)
Translates to: GKPLQVEGGGET*RYCPDSLAHLF
Trigger: GAAGAGATGGGCCAGTGAGTCTGGGCAGTAACGCCAAGTCTCTCCACCCCCTTCCACCTGAAGGGGCTTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467370.5
CDS CCA 72 bp GTGTCTTATTCCTCAGCAACCACGTGGGGGCAGCTCTaGCTCACCCCACTTCCAGGTGAGAAGTCGAGGCCC +
Preference number: 6 (lower is better)
Translates to: VSYSSATTWGQL*LTPLPGEKSRP
Trigger: GGGCCTCGACTTCTCACCTGGAAGTGGGGTGAGCCAGAGCTGCCCCCACGTGGTTGCTGAGGAATAAGACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467370.5
CDS CAA 90 bp CTCGCCAAGCCGGTGACTCACTCACTCGCTCACCCTCTCTCACTCTaGATGGGCCAAGTACCTGCCATGTGCTACGGACACAGCAGAGCG +
Preference number: 6 (lower is better)
Translates to: LAKPVTHSLAHPLSL*MGQVPAMCYGHSRA
Trigger: CGCTCTGCTGTGTCCGTAGCACATGGCAGGTACTTGGCCCATCAAGAGTGAGAGAGGGTGAGCGAGTGAGTGAGTCACCGGCTTGGCGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488356.5
CDS TCA 72 bp TGGTCAAGGTCAGGTTGCGGTTGGGTCTGGCCTGGTTaGTGGGGATGGTGGAGCCCTGGATCTTGTCACACC +
Preference number: 6 (lower is better)
Translates to: WSRSGCGWVWPG*WGWWSPGSCHT
Trigger: GGTGTGACAAGATCCAGGGCTCCACCATCCCCATCAACCAGGCCAGACCCAACCGCAACCTGACCTTGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000472186.5
ENST00000476245.5
CDS GCA 72 bp GCATCCAGGGCCTCAATGGTGGCCAGCTCCTCCTGGTaGTGCTCCATGAGATCTGCCAACCTGTACATCAGC +
Preference number: 6 (lower is better)
Translates to: ASRASMVASSSW*CSMRSANLYIS
Trigger: GCTGATGTACAGGTTGGCAGATCTCATGGAGCAGCACCAGGAGGAGCTGGCCACCATTGAGGCCCTGGATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000472186.5
ENST00000476245.5
CDS GCA 72 bp CAGGGACAGAGGAAGCAGGAGTGTCCAGCCTACACATaGGTGCATGTGAGTCCAGCCCTGTGGGCACACATG +
Preference number: 6 (lower is better)
Translates to: QGQRKQECPAYT*VHVSPALWAHM
Trigger: CATGTGTGCCCACAGGGCTGGACTCACATGCACGCATGTGTAGGCTGGACACTCCTGCTTCCTCTGTCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467370.5
CDS GCA 72 bp GAGAGGCTGAAAAAGGGTCTGGCCGGCCCTGCAGTCTaGAGCTTCAGGATAGCACTTCAAGCTGGTCCCAGG +
Preference number: 6 (lower is better)
Translates to: ERLKKGLAGPAV*SFRIALQAGPR
Trigger: CCTGGGACCAGCTTGAAGTGCTATCCTGAAGCTGCAGACTGCAGGGCCGGCCAGACCCTTTTTCAGCCTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484724.5
CDS CCA 72 bp TTCCTGGTCAAGGTCAGGTTGCGGTTGGGTCTGGCCTaGTTGATGGGGATGGTGGAGCCCTGTACATCAGCC +
Preference number: 6 (lower is better)
Translates to: FLVKVRLRLGLA*LMGMVEPCTSA
Trigger: GGCTGATGTACAGGGCTCCACCATCCCCATCAACCAGGCCAGACCCAACCGCAACCTGACCTTGACCAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS CAA 72 bp CTGGTCAAGGTCAGGTTGCGGTTGGGTCTGGCCTGGTaGATGGGGATGGTGGAGCCCTGGATCTTGTCACAC +
Preference number: 6 (lower is better)
Translates to: LVKVRLRLGLAW*MGMVEPWILSH
Trigger: GTGTGACAAGATCCAGGGCTCCACCATCCCCATCAACCAGGCCAGACCCAACCGCAACCTGACCTTGACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000472186.5
ENST00000476245.5
CDS CAA 72 bp TGGGAAGCCCCTTCAGGTGGAAGGGGGTGGAGAGACTaGGCGTTACTGCCCAGACTCACTGGCCCATCTCTT +
Preference number: 6 (lower is better)
Translates to: WEAPSGGRGWRD*ALLPRLTGPSL
Trigger: AAGAGATGGGCCAGTGAGTCTGGGCAGTAACGCCAAGTCTCTCCACCCCCTTCCACCTGAAGGGGCTTCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467370.5
CDS CAA 90 bp CCATCCTTCTCAGCTTCCAGACCCAGGGGGTCGGCCTTTCCATCCTaGTCTGGAACAGTGAACACACCCACCACTTCGTGGCCCTCCTTC +
Preference number: 6 (lower is better)
Translates to: PSFSASRPRGSAFPS*SGTVNTPTTSWPSF
Trigger: GAAGGAGGGCCACGAAGTGGTGGGTGTGTTCACTGTTCCAGACAAGGATGGAAAGGCCGACCCCCTGGGTCTGGAAGCTGAGAAGGATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000460368.5
ENST00000472186.5
ENST00000488356.5
ENST00000490367.5
ENST00000509952.5
CDS CAA 90 bp CTCTGTCACTCTGTCCTGGTGTCCAGGGGGTCGGCCTTTCCATCCTaGTCTGGAACAGTGAACACACCCACCACTTCGTGGCCCTCCTTC +
Preference number: 6 (lower is better)
Translates to: LCHSVLVSRGSAFPS*SGTVNTPTTSWPSF
Trigger: GAAGGAGGGCCACGAAGTGGTGGGTGTGTTCACTGTTCCAGACAAGGATGGAAAGGCCGACCCCCTGGACACCAGGACAGAGTGACAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000511283.2
CDS CAA 90 bp ACCACATCAGGCAAAGCCTGTCCTTTTGCACGCCACCGGGAGTACTaGAATACCGGCACTCCATCCTTCTCAGCTTCCAGACCCAGGGGG +
Preference number: 6 (lower is better)
Translates to: TTSGKACPFARHREY*NTGTPSFSASRPRG
Trigger: CCCCCTGGGTCTGGAAGCTGAGAAGGATGGAGTGCCGGTATTCAAGTACTCCCGGTGGCGTGCAAAAGGACAGGCTTTGCCTGATGTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000460368.5
ENST00000472186.5
ENST00000488356.5
ENST00000490367.5
ENST00000509952.5
CDS CAA 90 bp AGGAGGGTTGGAAGGACTGTGGACCCTTGGAGAATTCCCAGGGCTTaGAAAAGTCCCAAGCACCCAGCAGGGCTGGCAGTTCTGAGCGCT +
Preference number: 6 (lower is better)
Translates to: RRVGRTVDPWRIPRA*KSPKHPAGLAVLSA
Trigger: AGCGCTCAGAACTGCCAGCCCTGCTGGGTGCTTGGGACTTTTCAAAGCCCTGGGAATTCTCCAAGGGTCCACAGTCCTTCCAACCCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488356.5
CDS GCA 72 bp CTTCAGGTGGAAGGGGGTGGAGAGACTTGGCGTTACTaGCCAGACTCACTGGCCCATCTCTTCTCTCATGGC +
Preference number: 6 (lower is better)
Translates to: LQVEGGGETWRY*PDSLAHLFSHG
Trigger: GCCATGAGAGAAGAGATGGGCCAGTGAGTCTGGGCAGTAACGCCAAGTCTCTCCACCCCCTTCCACCTGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467370.5
CDS GCA 72 bp GGGGCCAAATCAGGATGTATGGCCTCGAGAGGTCACTaGCCAGTTTCCTCTAGCAGGGAAAACCCAGAGCCC +
Preference number: 6 (lower is better)
Translates to: GAKSGCMASRGH*PVSSSRENPEP
Trigger: GGGCTCTGGGTTTTCCCTGCTAGAGGAAACTGGGCAGTGACCTCTCGAGGCCATACATCCTGATTTGGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476245.5
CDS GCA 72 bp GGAAGAGGAGAGGCTGAAAAAGGGTCTGGCCGGCCCTaGAGTCTGCAGCTTCAGGATAGCACTTCAAGCTGG +
Preference number: 6 (lower is better)
Translates to: GRGEAEKGSGRP*SLQLQDSTSSW
Trigger: CCAGCTTGAAGTGCTATCCTGAAGCTGCAGACTGCAGGGCCGGCCAGACCCTTTTTCAGCCTCTCCTCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484724.5
CDS CCA 72 bp TTCCTGGTCAAGGTCAGGTTGCGGTTGGGTCTGGCCTaGTTGATGGGGATGGTGGAGCCCTGGATCTTGTCA +
Preference number: 6 (lower is better)
Translates to: FLVKVRLRLGLA*LMGMVEPWILS
Trigger: TGACAAGATCCAGGGCTCCACCATCCCCATCAACCAGGCCAGACCCAACCGCAACCTGACCTTGACCAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000472186.5
ENST00000476245.5
CDS CCA 72 bp TTACTGCCCAGACTCACTGGCCCATCTCTTCTCTCATaGCTGCCCCCAGCTACGTCTGCATCAAGCTGTGGC +
Preference number: 6 (lower is better)
Translates to: LLPRLTGPSLLS*LPPATSASSCG
Trigger: GCCACAGCTTGATGCAGACGTAGCTGGGGGCAGCCATGAGAGAAGAGATGGGCCAGTGAGTCTGGGCAGTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467370.5
CDS CAA 72 bp TCAGCTTCCAGACCCAGGGGGTCGGCCTTTCCATCCTaGTCTGGAACAGTGAACACACCCACCACTTCGTGG +
Preference number: 6 (lower is better)
Translates to: SASRPRGSAFPS*SGTVNTPTTSW
Trigger: CCACGAAGTGGTGGGTGTGTTCACTGTTCCAGACAAGGATGGAAAGGCCGACCCCCTGGGTCTGGAAGCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000460368.5
ENST00000472186.5
ENST00000488356.5
ENST00000490367.5
ENST00000509952.5
CDS CAA 72 bp TCTGTCCTGGTGTCCAGGGGGTCGGCCTTTCCATCCTaGTCTGGAACAGTGAACACACCCACCACTTCGTGG +
Preference number: 6 (lower is better)
Translates to: SVLVSRGSAFPS*SGTVNTPTTSW
Trigger: CCACGAAGTGGTGGGTGTGTTCACTGTTCCAGACAAGGATGGAAAGGCCGACCCCCTGGACACCAGGACAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000511283.2
CDS TCA 72 bp CAAGCTAAAGCCCAGCCAGACTCCACAGGGCGTGGCTaGGAGATGCTTCAACCCAGGGTCTTCTGGGTTGAT +
Preference number: 6 (lower is better)
Translates to: QAKAQPDSTGRG*EMLQPRVFWVD
Trigger: ATCAACCCAGAAGACCCTGGGTTGAAGCATCTCTCAGCCACGCCCTGTGGAGTCTGGCTGGGCTTTAGCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484724.5
CDS TCA 72 bp GCATGCTCTGCCAGAACTGGAACTTGCCTCTCGGCCTaGCCCTCGCCCCATTGCCTTTCAAAGATGTTCTGG +
Preference number: 6 (lower is better)
Translates to: ACSARTGTCLSA*PSPHCLSKMFW
Trigger: CCAGAACATCTTTGAAAGGCAATGGGGCGAGGGTCAGGCCGAGAGGCAAGTTCCAGTTCTGGCAGAGCATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484724.5
CDS GCA 72 bp GTCTGGGTCCTATTACAGCCCCGGTGCCAAGCACAGTaGCTGCACGCAGCTGGTGCTGCACAAATTAAGGAA +
Preference number: 6 (lower is better)
Translates to: VWVLLQPRCQAQ*LHAAGAAQIKE
Trigger: TTCCTTAATTTGTGCAGCACCAGCTGCGTGCAGGCACTGTGCTTGGCACCGGGGCTGTAATAGGACCCAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467370.5
CDS CCA 72 bp ACCCGTGGTGTTCACCCGGGGGTACATTTGGTCCCATaGCTCCTCTTTACACTAAGGATGCAACCTGAGCCC +
Preference number: 6 (lower is better)
Translates to: TRGVHPGVHLVP*LLFTLRMQPEP
Trigger: GGGCTCAGGTTGCATCCTTAGTGTAAAGAGGAGCCATGGGACCAAATGTACCCCCGGGTGAACACCACGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467370.5
CDS CCA 72 bp GAGCCTGGACCCTTCCCCAGACTGACCAGACTTGCCTaGTACACAGCAGTCACCCAAGAAACACCTGCCATA +
Preference number: 6 (lower is better)
Translates to: EPGPFPRLTRLA*YTAVTQETPAI
Trigger: TATGGCAGGTGTTTCTTGGGTGACTGCTGTGTACCAGGCAAGTCTGGTCAGTCTGGGGAAGGGTCCAGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476245.5
CDS CCA 72 bp GGCAGTGATGAAGGTGTCCCACAAGGGGTGCTGTGCTaGGCGCTCCAGCCTTGTCTCCAACCATTTTGTCAT +
Preference number: 6 (lower is better)
Translates to: GSDEGVPQGVLC*ALQPCLQPFCH
Trigger: ATGACAAAATGGTTGGAGACAAGGCTGGAGCGCCCAGCACAGCACCCCTTGTGGGACACCTTCATCACTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476245.5
CDS CAA 90 bp TACTGGGAGACTTGCAACACCCGTGGTGTTCACCCGGGGGTACATTaGGTCCCATGGCTCCTCTTTACACTAAGGATGCAACCTGAGCCC +
Preference number: 6 (lower is better)
Translates to: YWETCNTRGVHPGVH*VPWLLFTLRMQPEP
Trigger: GGGCTCAGGTTGCATCCTTAGTGTAAAGAGGAGCCATGGGACCAAATGTACCCCCGGGTGAACACCACGGGTGTTGCAAGTCTCCCAGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467370.5
CDS CAA 90 bp TCTCCAACCATTTTGTCATCATTCCCAAAGAGGATGAGTCCTGCTTaGGTGACCACCCCTGGCCGATGGGCTCCTGGGATGGGCAAAGCG +
Preference number: 6 (lower is better)
Translates to: SPTILSSFPKRMSPA*VTTPGRWAPGMGKA
Trigger: CGCTTTGCCCATCCCAGGAGCCCATCGGCCAGGGGTGGTCACCAAAGCAGGACTCATCCTCTTTGGGAATGATGACAAAATGGTTGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476245.5
CDS TCA 72 bp GGATGGCTGTTTGATAAATGCACGCACAGGGTGCTGTaGGCTCCCGCAGGCTGTGCTACAGTTCCGTGTACT +
Preference number: 6 (lower is better)
Translates to: GWLFDKCTHRVL*APAGCATVPCT
Trigger: AGTACACGGAACTGTAGCACAGCCTGCGGGAGCTCACAGCACCCTGTGCGTGCATTTATCAAACAGCCATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476245.5
CDS GCA 72 bp GGGTTGCCCACCTTCATCTTCCGCACCTCTTCTACCTaGAGAAAGTCCTCCAAGTCAGGTGTGGCTTGTGCT +
Preference number: 6 (lower is better)
Translates to: GLPTFIFRTSST*RKSSKSGVACA
Trigger: AGCACAAGCCACACCTGACTTGGAGGACTTTCTGCAGGTAGAAGAGGTGCGGAAGATGAAGGTGGGCAACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462808.1
CDS GCA 72 bp GGGTCCTATTACAGCCCCGGTGCCAAGCACAGTGCCTaGACGCAGCTGGTGCTGCACAAATTAAGGAATACA +
Preference number: 6 (lower is better)
Translates to: GSYYSPGAKHSA*TQLVLHKLRNT
Trigger: TGTATTCCTTAATTTGTGCAGCACCAGCTGCGTGCAGGCACTGTGCTTGGCACCGGGGCTGTAATAGGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467370.5
CDS GCA 72 bp CACATGGATGGCTGTTTGATAAATGCACGCACAGGGTaGTGTGAGCTCCCGCAGGCTGTGCTACAGTTCCGT +
Preference number: 6 (lower is better)
Translates to: HMDGCLINARTG*CELPQAVLQFR
Trigger: ACGGAACTGTAGCACAGCCTGCGGGAGCTCACAGCACCCTGTGCGTGCATTTATCAAACAGCCATCCATGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476245.5
CDS CCA 72 bp GTAACTTCACCTCTACTGGGAGACTTGCAACACCCGTaGTGTTCACCCGGGGGTACATTTGGTCCCATGGCT +
Preference number: 6 (lower is better)
Translates to: VTSPLLGDLQHP*CSPGGTFGPMA
Trigger: AGCCATGGGACCAAATGTACCCCCGGGTGAACACCACGGGTGTTGCAAGTCTCCCAGTAGAGGTGAAGTTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467370.5
CDS TCA 72 bp CAAAAGGAAGGATTTCACAGTTCCTGTGGTCGGACCTaGGGCAGTGATGAAGGTGTCCCACAAGGGGTGCTG +
Preference number: 6 (lower is better)
Translates to: QKEGFHSSCGRT*GSDEGVPQGVL
Trigger: CAGCACCCCTTGTGGGACACCTTCATCACTGCCTCAGGTCCGACCACAGGAACTGTGAAATCCTTCCTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476245.5
CDS TCA 72 bp CCAGCATCACGGCTTTGGAGCCAGAATTTCAGAGTCTaGATCCCAGCTCTGCCACGGGCTAGCTTGGATGAT +
Preference number: 6 (lower is better)
Translates to: PASRLWSQNFRV*IPALPRASLDD
Trigger: ATCATCCAAGCTAGCCCGTGGCAGAGCTGGGATTCAGACTCTGAAATTCTGGCTCCAAAGCCGTGATGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484724.5
CDS TCA 72 bp CAGCCATCAGTTCAAGGGGATTCTGGCTGCCAGACATaGACTGCCCCCATTGTAGCTCATGACTCTGGGCTA +
Preference number: 6 (lower is better)
Translates to: QPSVQGDSGCQT*TAPIVAHDSGL
Trigger: TAGCCCAGAGTCATGAGCTACAATGGGGGCAGTTCATGTCTGGCAGCCAGAATCCCCTTGAACTGATGGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484724.5
CDS GCA 72 bp ACATCACATCAGTGGGCAAGAAATGCACTGCAGGGATaGTGTCCTCAGCTGGACACTCAGTCAATAGCCGGC +
Preference number: 6 (lower is better)
Translates to: TSHQWARNALQG*CPQLDTQSIAG
Trigger: GCCGGCTATTGACTGAGTGTCCAGCTGAGGACAGCATCCCTGCAGTGCATTTCTTGCCCACTGATGTGATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467370.5
CDS GCA 72 bp AACCATTTTGTCATCATTCCCAAAGAGGATGAGTCCTaGTTTGGTGACCACCCCTGGCCGATGGGCTCCTGG +
Preference number: 6 (lower is better)
Translates to: NHFVIIPKEDES*FGDHPWPMGSW
Trigger: CCAGGAGCCCATCGGCCAGGGGTGGTCACCAAAGCAGGACTCATCCTCTTTGGGAATGATGACAAAATGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476245.5
CDS CCA 72 bp CGAGGTCATGAATCTTACCCAGGTTATCCCTGGCAGTaGATAGTGGGCCAGGACTCCCCAGAATACAAAGCC +
Preference number: 6 (lower is better)
Translates to: RGHESYPGYPWQ*IVGQDSPEYKA
Trigger: GGCTTTGTATTCTGGGGAGTCCTGGCCCACTATCCACTGCCAGGGATAACCTGGGTAAGATTCATGACCTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467370.5
CDS CAA 72 bp GGCTGCCTTGTTGGACAGTGCAGCTTCAAGGAGTATTaGAGTTGCTTGCCGTGGGAAGCACAGGTAAGCTCC +
Preference number: 6 (lower is better)
Translates to: GCLVGQCSFKEY*SCLPWEAQVSS
Trigger: GGAGCTTACCTGTGCTTCCCACGGCAAGCAACTCAAATACTCCTTGAAGCTGCACTGTCCAACAAGGCAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476245.5
CDS CAA 72 bp ATGGAGCAGGTGCTCAAGAAGCACATGGATGGCTGTTaGATAAATGCACGCACAGGGTGCTGTGAGCTCCCG +
Preference number: 6 (lower is better)
Translates to: MEQVLKKHMDGC*INARTGCCELP
Trigger: CGGGAGCTCACAGCACCCTGTGCGTGCATTTATCAAACAGCCATCCATGTGCTTCTTGAGCACCTGCTCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476245.5
CDS CAA 72 bp AACTGGAACTTGCCTCTCGGCCTGACCCTCGCCCCATaGCCTTTCAAAGATGTTCTGGAGCTTTCTGCAAGC +
Preference number: 6 (lower is better)
Translates to: NWNLPLGLTLAP*PFKDVLELSAS
Trigger: GCTTGCAGAAAGCTCCAGAACATCTTTGAAAGGCAATGGGGCGAGGGTCAGGCCGAGAGGCAAGTTCCAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484724.5
CDS CAA 90 bp CAGTGGCTGCCTTGTTGGACAGTGCAGCTTCAAGGAGTATTTGAGTaGCTTGCCGTGGGAAGCACAGGTAAGCTCCCTCTCTGTACCACT +
Preference number: 6 (lower is better)
Translates to: QWLPCWTVQLQGVFE*LAVGSTGKLPLCTT
Trigger: AGTGGTACAGAGAGGGAGCTTACCTGTGCTTCCCACGGCAAGCAACTCAAATACTCCTTGAAGCTGCACTGTCCAACAAGGCAGCCACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476245.5
CDS TCA 72 bp CAAAGACCTTTCTTCAGTATTCGAAGGTCACTGTCTTaGCCCGCAGGTACTCGTTCAGAGCCGCCTCTCCTG +
Preference number: 6 (lower is better)
Translates to: QRPFFSIRRSLS*PAGTRSEPPLL
Trigger: CAGGAGAGGCGGCTCTGAACGAGTACCTGCGGGTCAAGACAGTGACCTTCGAATACTGAAGAAAGGTCTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467370.5
CDS TCA 72 bp CCCCGTGGTGGGCTTGAAGGTGGAAGTTTGGAGGTCTaGGATGAAGCAGGAAGTTGTTTCTCTGTGACAGGA +
Preference number: 6 (lower is better)
Translates to: PRGGLEGGSLEV*DEAGSCFSVTG
Trigger: TCCTGTCACAGAGAAACAACTTCCTGCTTCATCTCAGACCTCCAAACTTCCACCTTCAAGCCCACCACGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476245.5
CDS CCA 72 bp ACAGAGAGGCTGGGAGTCATGAACACATCACATCAGTaGGCAAGAAATGCACTGCAGGGATGCTGTCCTCAG +
Preference number: 6 (lower is better)
Translates to: TERLGVMNTSHQ*ARNALQGCCPQ
Trigger: CTGAGGACAGCATCCCTGCAGTGCATTTCTTGCCCACTGATGTGATGTGTTCATGACTCCCAGCCTCTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467370.5
CDS CCA 72 bp TCACCCAGTAGCTCCCAGAACTGCCACAGAAACACCTaGAGAACATCACCAGATGCCTGTGTGGGATACAGA +
Preference number: 6 (lower is better)
Translates to: SPSSSQNCHRNT*RTSPDACVGYR
Trigger: TCTGTATCCCACACAGGCATCTGGTGATGTTCTCCAGGTGTTTCTGTGGCAGTTCTGGGAGCTACTGGGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484724.5
CDS CAA 72 bp ACTTGCAACACCCGTGGTGTTCACCCGGGGGTACATTaGGTCCCATGGCTCCTCTTTACACTAAGGATGCAA +
Preference number: 6 (lower is better)
Translates to: TCNTRGVHPGVH*VPWLLFTLRMQ
Trigger: TTGCATCCTTAGTGTAAAGAGGAGCCATGGGACCAAATGTACCCCCGGGTGAACACCACGGGTGTTGCAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467370.5
CDS CAA 72 bp CCTTGTTGGACAGTGCAGCTTCAAGGAGTATTTGAGTaGCTTGCCGTGGGAAGCACAGGTAAGCTCCCTCTC +
Preference number: 6 (lower is better)
Translates to: PCWTVQLQGVFE*LAVGSTGKLPL
Trigger: GAGAGGGAGCTTACCTGTGCTTCCCACGGCAAGCAACTCAAATACTCCTTGAAGCTGCACTGTCCAACAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476245.5
CDS CAA 72 bp CAGGAAGCTACCATGGCCAAGACCAGCATCACGGCTTaGGAGCCAGAATTTCAGAGTCTGAATCCCAGCTCT +
Preference number: 6 (lower is better)
Translates to: QEATMAKTSITA*EPEFQSLNPSS
Trigger: AGAGCTGGGATTCAGACTCTGAAATTCTGGCTCCAAAGCCGTGATGCTGGTCTTGGCCATGGTAGCTTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484724.5
CDS CAA 90 bp GTTACCAGTGGCTGCCTTGTTGGACAGTGCAGCTTCAAGGAGTATTaGAGTTGCTTGCCGTGGGAAGCACAGGTAAGCTCCCTCTCTGTA +
Preference number: 6 (lower is better)
Translates to: VTSGCLVGQCSFKEY*SCLPWEAQVSSLSV
Trigger: TACAGAGAGGGAGCTTACCTGTGCTTCCCACGGCAAGCAACTCAAATACTCCTTGAAGCTGCACTGTCCAACAAGGCAGCCACTGGTAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476245.5
CDS CAA 90 bp GAACTCCTCCTGCTGAGCAGCTCTCGTCCTCTGCCTGTTCCTCCTTaGTTCTATATTTCCTGTTCCTCAGTGCTGTGCAGGAGTTCCTCA +
Preference number: 6 (lower is better)
Translates to: ELLLLSSSRPLPVPP*FYISCSSVLCRSSS
Trigger: TGAGGAACTCCTGCACAGCACTGAGGAACAGGAAATATAGAACAAAGGAGGAACAGGCAGAGGACGAGAGCTGCTCAGCAGGAGGAGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476245.5
CDS CAA 90 bp AACAGGCTCTGTCCAATCACTGCAATCTTCATGGTAGCAGGAGGGTaGGAAGGACCTTGCTTGTTCACTCAGTACTCCTGGGGGTCGCTA +
Preference number: 6 (lower is better)
Translates to: NRLCPITAIFMVAGG*EGPCLFTQYSWGSL
Trigger: TAGCGACCCCCAGGAGTACTGAGTGAACAAGCAAGGTCCTTCCAACCCTCCTGCTACCATGAAGATTGCAGTGATTGGACAGAGCCTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000509952.5
ENST00000511283.2
CDS CAA 90 bp GGCTGCCTTGTTGGACAGTGCAGCTTCAAGGAGTATTTGAGTTGCTaGCCGTGGGAAGCACAGGTAAGCTCCCTCTCTGTACCACTAAAT +
Preference number: 6 (lower is better)
Translates to: GCLVGQCSFKEYLSC*PWEAQVSSLSVPLN
Trigger: ATTTAGTGGTACAGAGAGGGAGCTTACCTGTGCTTCCCACGGCAAGCAACTCAAATACTCCTTGAAGCTGCACTGTCCAACAAGGCAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476245.5
CDS TCA 72 bp GTAGGTTACCTAGATCTTTGCCAAATCCAGACTGTTTaGATCCTCCGAAGGGAGCGGCCACGTCGGTCTTGT +
Preference number: 6 (lower is better)
Translates to: VGYLDLCQIQTV*ILRRERPRRSC
Trigger: ACAAGACCGACGTGGCCGCTCCCTTCGGAGGATTCAAACAGTCTGGATTTGGCAAAGATCTAGGTAACCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467370.5
CDS TCA 72 bp TGGCTGCCAGACATGAACTGCCCCCATTGTAGCTCATaGCTCTGGGCTACTCTAGTGTCTGCCTCAGATTTA +
Preference number: 6 (lower is better)
Translates to: WLPDMNCPHCSS*LWATLVSASDL
Trigger: TAAATCTGAGGCAGACACTAGAGTAGCCCAGAGTCATGAGCTACAATGGGGGCAGTTCATGTCTGGCAGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484724.5
CDS GCA 72 bp CTTGTTGGACAGTGCAGCTTCAAGGAGTATTTGAGTTaGTTGCCGTGGGAAGCACAGGTAAGCTCCCTCTCT +
Preference number: 6 (lower is better)
Translates to: LVGQCSFKEYLS*LPWEAQVSSLS
Trigger: AGAGAGGGAGCTTACCTGTGCTTCCCACGGCAAGCAACTCAAATACTCCTTGAAGCTGCACTGTCCAACAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476245.5
CDS GCA 72 bp TATGAACAAGGGAGTCAGCGTGAACCTAACTTCTATTaGACAACGGACACAGACCCGTCCTCTCTACCTGGC +
Preference number: 6 (lower is better)
Translates to: YEQGSQREPNFY*TTDTDPSSLPG
Trigger: GCCAGGTAGAGAGGACGGGTCTGTGTCCGTTGTGCAATAGAAGTTAGGTTCACGCTGACTCCCTTGTTCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476245.5
CDS GCA 72 bp CTGGATGATAACGGCCTGCACTGTCCCATCCTTGCTTaGTGTGGATGGATAAGAGCTCCTGTACACAAAGAG +
Preference number: 6 (lower is better)
Translates to: LDDNGLHCPILA*CGWIRAPVHKE
Trigger: CTCTTTGTGTACAGGAGCTCTTATCCATCCACAGCAAGCAAGGATGGGACAGTGCAGGCCGTTATCATCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484724.5
CDS CCA 72 bp CAGTGCAGCTTCAAGGAGTATTTGAGTTGCTTGCCGTaGGAAGCACAGGTAAGCTCCCTCTCTGTACCACTA +
Preference number: 6 (lower is better)
Translates to: QCSFKEYLSCLP*EAQVSSLSVPL
Trigger: TAGTGGTACAGAGAGGGAGCTTACCTGTGCTTCCCACGGCAAGCAACTCAAATACTCCTTGAAGCTGCACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476245.5
CDS CAA 72 bp AGTAGGTTACCTAGATCTTTGCCAAATCCAGACTGTTaGAATCCTCCGAAGGGAGCGGCCACGTCGGTCTTG +
Preference number: 6 (lower is better)
Translates to: SRLPRSLPNPDC*NPPKGAATSVL
Trigger: CAAGACCGACGTGGCCGCTCCCTTCGGAGGATTCAAACAGTCTGGATTTGGCAAAGATCTAGGTAACCTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467370.5
CDS CAA 72 bp GTTGGACAGTGCAGCTTCAAGGAGTATTTGAGTTGCTaGCCGTGGGAAGCACAGGTAAGCTCCCTCTCTGTA +
Preference number: 6 (lower is better)
Translates to: VGQCSFKEYLSC*PWEAQVSSLSV
Trigger: TACAGAGAGGGAGCTTACCTGTGCTTCCCACGGCAAGCAACTCAAATACTCCTTGAAGCTGCACTGTCCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476245.5
CDS CAA 90 bp ATAAATGAAAGCAACCCCACAGGCAGGAGTAGGTTACCTAGATCTTaGCCAAATCCAGACTGTTTGAATCCTCCGAAGGGAGCGGCCACG +
Preference number: 6 (lower is better)
Translates to: INESNPTGRSRLPRS*PNPDCLNPPKGAAT
Trigger: CGTGGCCGCTCCCTTCGGAGGATTCAAACAGTCTGGATTTGGCAAAGATCTAGGTAACCTACTCCTGCCTGTGGGGTTGCTTTCATTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467370.5
CDS GCA 72 bp ACTTGCCTGGTACACAGCAGTCACCCAAGAAACACCTaGCATATGAACAAGGGAGTCAGCGTGAACCTAACT +
Preference number: 6 (lower is better)
Translates to: TCLVHSSHPRNT*HMNKGVSVNLT
Trigger: AGTTAGGTTCACGCTGACTCCCTTGTTCATATGGCAGGTGTTTCTTGGGTGACTGCTGTGTACCAGGCAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476245.5
CDS GCA 72 bp TTTGGAGCCAGAATTTCAGAGTCTGAATCCCAGCTCTaGCACGGGCTAGCTTGGATGATCCTGGACAAGTTA +
Preference number: 6 (lower is better)
Translates to: FGARISESESQL*HGLAWMILDKL
Trigger: TAACTTGTCCAGGATCATCCAAGCTAGCCCGTGGCAGAGCTGGGATTCAGACTCTGAAATTCTGGCTCCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484724.5
CDS CCA 72 bp AGGAGTAGTAGAGTGCATATGAACAGGAAGCTACCATaGCCAAGACCAGCATCACGGCTTTGGAGCCAGAAT +
Preference number: 6 (lower is better)
Translates to: RSSRVHMNRKLP*PRPASRLWSQN
Trigger: ATTCTGGCTCCAAAGCCGTGATGCTGGTCTTGGCCATGGTAGCTTCCTGTTCATATGCACTCTACTACTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484724.5
CDS CAA 72 bp AGCAACCCCACAGGCAGGAGTAGGTTACCTAGATCTTaGCCAAATCCAGACTGTTTGAATCCTCCGAAGGGA +
Preference number: 6 (lower is better)
Translates to: SNPTGRSRLPRS*PNPDCLNPPKG
Trigger: TCCCTTCGGAGGATTCAAACAGTCTGGATTTGGCAAAGATCTAGGTAACCTACTCCTGCCTGTGGGGTTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467370.5
CDS CAA 90 bp TTTCTTCTCACAAAGACCTTTCTTCAGTATTCGAAGGTCACTGTCTaGACCCGCAGGTACTCGTTCAGAGCCGCCTCTCCTGTAAGACAC +
Preference number: 6 (lower is better)
Translates to: FLLTKTFLQYSKVTV*TRRYSFRAASPVRH
Trigger: GTGTCTTACAGGAGAGGCGGCTCTGAACGAGTACCTGCGGGTCAAGACAGTGACCTTCGAATACTGAAGAAAGGTCTTTGTGAGAAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467370.5
CDS TCA 72 bp AGGACTGTTTTATTACCATTTGACAGTTGGGGAGACTaGGTACAGACAGGCTGGGAGCTTGCCCTAGAAAGG +
Preference number: 6 (lower is better)
Translates to: RTVLLPFDSWGD*VQTGWELALER
Trigger: CCTTTCTAGGGCAAGCTCCCAGCCTGTCTGTACTCAGTCTCCCCAACTGTCAAATGGTAATAAAACAGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476245.5
CDS GCA 72 bp AAACTAATCTTGCAATCACCCAGTAGCTCCCAGAACTaGCACAGAAACACCTGGAGAACATCACCAGATGCC +
Preference number: 6 (lower is better)
Translates to: KLILQSPSSSQN*HRNTWRTSPDA
Trigger: GGCATCTGGTGATGTTCTCCAGGTGTTTCTGTGGCAGTTCTGGGAGCTACTGGGTGATTGCAAGATTAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484724.5
CDS GCA 72 bp GTTATGGATAAGCTCATGGGTGGGTGCATGTCACTGTaGGTTAAGAGTGGCTGTGTAAGAATGGTACTCTGT +
Preference number: 6 (lower is better)
Translates to: VMDKLMGGCMSL*VKSGCVRMVLC
Trigger: ACAGAGTACCATTCTTACACAGCCACTCTTAACGCACAGTGACATGCACCCACCCATGAGCTTATCCATAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484724.5
CDS CAA 72 bp AGCCCTGCAGGTATAACACAGACACAAATGTCCATGTaGCTGTCTAAGCCTTCTCTGCCTTTAAAGAGAGTG +
Preference number: 6 (lower is better)
Translates to: SPAGITQTQMSM*LSKPSLPLKRV
Trigger: CACTCTCTTTAAAGGCAGAGAAGGCTTAGACAGCAACATGGACATTTGTGTCTGTGTTATACCTGCAGGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476245.5
CDS CCA 72 bp CTATTGCACAACGGACACAGACCCGTCCTCTCTACCTaGCAAAGGTTTAGATTACATAGATCTTACATCTTC +
Preference number: 6 (lower is better)
Translates to: LLHNGHRPVLST*QRFRLHRSYIF
Trigger: GAAGATGTAAGATCTATGTAATCTAAACCTTTGCCAGGTAGAGAGGACGGGTCTGTGTCCGTTGTGCAATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476245.5
CDS TCA 72 bp TTTGGGTTTACTCTTGTTTCCCACCGTGGACCTGACTaGTCCAGTGTTACTGGGAGATTAAATACAATTGTC +
Preference number: 6 (lower is better)
Translates to: FGFTLVSHRGPD*SSVTGRLNTIV
Trigger: GACAATTGTATTTAATCTCCCAGTAACACTGGATCAGTCAGGTCCACGGTGGGAAACAAGAGTAAACCCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476245.5
CDS GCA 72 bp TGCATATATCAATCTTGGATACCCAAAACACTACATTaGAGACATCAACAGCAGCCTAGACCTTCTGACAGG +
Preference number: 6 (lower is better)
Translates to: CIYQSWIPKTLH*RHQQQPRPSDR
Trigger: CCTGTCAGAAGGTCTAGGCTGCTGTTGATGTCTGCAATGTAGTGTTTTGGGTATCCAAGATTGATATATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484724.5
CDS CCA 72 bp TGCTTTCCTCTGCCCTTACTGCCTCGCATGATTTTCTaGAACATTCCCTCAATAAATCACTTGCACAAGAAT +
Preference number: 6 (lower is better)
Translates to: CFPLPLLPRMIF*NIPSINHLHKN
Trigger: ATTCTTGTGCAAGTGATTTATTGAGGGAATGTTCCAGAAAATCATGCGAGGCAGTAAGGGCAGAGGAAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484724.5
CDS CCA 72 bp TCCAGCAACTCTACTTTGTTCACTATTTTTGTGAGCTaGTCAATCTGTGGGGAAGACAAGTTTAACACAACC +
Preference number: 6 (lower is better)
Translates to: SSNSTLFTIFVS*SICGEDKFNTT
Trigger: GGTTGTGTTAAACTTGTCTTCCCCACAGATTGACCAGCTCACAAAAATAGTGAACAAAGTAGAGTTGCTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476245.5
CDS GCA 72 bp AGGGAACCTGACCACAGACAGATATTCTCTTGCAACTaGATATATCAATCTTGGATACCCAAAACACTACAT +
Preference number: 6 (lower is better)
Translates to: REPDHRQIFSCN*IYQSWIPKTLH
Trigger: ATGTAGTGTTTTGGGTATCCAAGATTGATATATGCAGTTGCAAGAGAATATCTGTCTGTGGTCAGGTTCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484724.5
CDS CCA 72 bp TTCATTTTAATTGATTTAATAGCTGCATGTTACCAGTaGCTGCCTTGTTGGACAGTGCAGCTTCAAGGAGTA +
Preference number: 6 (lower is better)
Translates to: FILIDLIAACYQ*LPCWTVQLQGV
Trigger: TACTCCTTGAAGCTGCACTGTCCAACAAGGCAGCCACTGGTAACATGCAGCTATTAAATCAATTAAAATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476245.5
CDS CCA 72 bp GTTAGGCAGATTAAATTTAACGCATATACATTGTTCTaGTATAAAAGGTGCTCCATCAGTGTTTGCTGGTAC +
Preference number: 6 (lower is better)
Translates to: VRQIKFNAYTLF*YKRCSISVCWY
Trigger: GTACCAGCAAACACTGATGGAGCACCTTTTATACCAGAACAATGTATATGCGTTAAATTTAATCTGCCTAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484724.5
CDS CCA 72 bp AGACAGATATTCTCTTGCAACTGCATATATCAATCTTaGATACCCAAAACACTACATTGCAGACATCAACAG +
Preference number: 6 (lower is better)
Translates to: RQIFSCNCIYQS*IPKTLHCRHQQ
Trigger: CTGTTGATGTCTGCAATGTAGTGTTTTGGGTATCCAAGATTGATATATGCAGTTGCAAGAGAATATCTGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484724.5
CDS CAA 72 bp CAGACAGATATTCTCTTGCAACTGCATATATCAATCTaGGATACCCAAAACACTACATTGCAGACATCAACA +
Preference number: 6 (lower is better)
Translates to: QTDILLQLHISI*DTQNTTLQTST
Trigger: TGTTGATGTCTGCAATGTAGTGTTTTGGGTATCCAAGATTGATATATGCAGTTGCAAGAGAATATCTGTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484724.5
CDS CAA 72 bp AGTGTTGTTAGGCAGATTAAATTTAACGCATATACATaGTTCTGGTATAAAAGGTGCTCCATCAGTGTTTGC +
Preference number: 6 (lower is better)
Translates to: SVVRQIKFNAYT*FWYKRCSISVC
Trigger: GCAAACACTGATGGAGCACCTTTTATACCAGAACAATGTATATGCGTTAAATTTAATCTGCCTAACAACACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484724.5