RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ALDH1L1 (Homo sapiens)

Ensembl gene IDs: ENSG00000144908

Ensembl transcript IDs: ENST00000273450.7, ENST00000393431.6, ENST00000393434.7, ENST00000413612.5, ENST00000452905.6, ENST00000455064.6, ENST00000460368.5, ENST00000462808.1, ENST00000467370.5, ENST00000472186.5, ENST00000473607.5, ENST00000476245.5, ENST00000484724.5, ENST00000488356.5, ENST00000490367.5, ENST00000493803.5, ENST00000509952.5, ENST00000511283.2

Found 1311 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGTTGGGCTCCCACCTGTACATCAGCCGGCCCCGGTCCCGCGCACTaGTCTTCCCCCACCGTCCATTCTCAAAGGCATCCTTGGCTGCGG +
Preference number: 1 (lower is better)
Translates to: CWAPTCTSAGPGPAH*SSPTVHSQRHPWLR
Trigger: CCGCAGCCAAGGATGCCTTTGAGAATGGACGGTGGGGGAAGATCAGTGCGCGGGACCGGGGCCGGCTGATGTACAGGTGGGAGCCCAACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR CCA 90 bp TCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGACTaGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGGAG +
Preference number: 1 (lower is better)
Translates to: SLGGAHLTQPRAASD*TEGVQDADMVCRQE
Trigger: CTCCTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
3UTR CCA 90 bp TTCCCAAAGAGGATGAGTCCTGCTTTGGTGACCACCCCTGGCCGATaGGCTCCTGGGATGGGCAAAGCGTCTCCCTCGGGCACCAGGCCT +
Preference number: 1 (lower is better)
Translates to: FPKRMSPALVTTPGR*APGMGKASPSGTRP
Trigger: AGGCCTGGTGCCCGAGGGAGACGCTTTGCCCATCCCAGGAGCCCATCGGCCAGGGGTGGTCACCAAAGCAGGACTCATCCTCTTTGGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000493803.5
3UTR CCA 90 bp AGGGAAGTGCTTTGTCTGCCTGGGAGGCCCAGCCTGCGCCCACTTTaGAAGCATCCCTTGGCTTCCGCACCTCCTCACCTCCACCAGGCA +
Preference number: 1 (lower is better)
Translates to: REVLCLPGRPSLRPL*KHPLASAPPHLHQA
Trigger: TGCCTGGTGGAGGTGAGGAGGTGCGGAAGCCAAGGGATGCTTCCAAAGTGGGCGCAGGCTGGGCCTCCCAGGCAGACAAAGCACTTCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR CCA 90 bp AAGTCCCCTCCAGCCCAGGCTGGTGAGGGAAGTGCTTTGTCTGCCTaGGAGGCCCAGCCTGCGCCCACTTTGGAAGCATCCCTTGGCTTC +
Preference number: 1 (lower is better)
Translates to: KSPPAQAGEGSALSA*EAQPAPTLEASLGF
Trigger: GAAGCCAAGGGATGCTTCCAAAGTGGGCGCAGGCTGGGCCTCCCAGGCAGACAAAGCACTTCCCTCACCAGCCTGGGCTGGAGGGGACTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR TCA 90 bp TCTGTCCAGGCTCCCGGCACCTTGTCGTTCCCGCGGATCCAGTTGTaGATGGCCTCTGCCGGCTGGTCCCAGTTGATCTTGGCTGTCTCC +
Preference number: 1 (lower is better)
Translates to: SVQAPGTLSFPRIQL*MASAGWSQLILAVS
Trigger: GGAGACAGCCAAGATCAACTGGGACCAGCCGGCAGAGGCCATTCACAACTGGATCCGCGGGAACGACAAGGTGCCGGGAGCCTGGACAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000493803.5
3UTR GCA 90 bp CATGGTGATTCTGCGGCCCGTGGTCGGTGTCCCTGTCCAGCGGGTTaGCCACCTTCATCTTCCGCACCTCTTCTACCACTCTCCGCACGA +
Preference number: 1 (lower is better)
Translates to: HGDSAARGRCPCPAG*PPSSSAPLLPLSAR
Trigger: TCGTGCGGAGAGTGGTAGAAGAGGTGCGGAAGATGAAGGTGGGCAACCCGCTGGACAGGGACACCGACCACGGGCCGCAGAATCACCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR GCA 90 bp CTTCCCCCACCGTCCATTCTCAAAGGCATCCTTGGCTGCGGCCACTaGCTTGTCGACGTCGGTGACTTGGGCCAGGGATACCTGGCAGAT +
Preference number: 1 (lower is better)
Translates to: LPPPSILKGILGCGH*LVDVGDLGQGYLAD
Trigger: ATCTGCCAGGTATCCCTGGCCCAAGTCACCGACGTCGACAAGGCAGTGGCCGCAGCCAAGGATGCCTTTGAGAATGGACGGTGGGGGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR GCA 90 bp CGCACTGATCTTCCCCCACCGTCCATTCTCAAAGGCATCCTTGGCTaGGGCCACTGCCTTGTCGACGTCGGTGACTTGGGCCAGGGATAC +
Preference number: 1 (lower is better)
Translates to: RTDLPPPSILKGILG*GHCLVDVGDLGQGY
Trigger: GTATCCCTGGCCCAAGTCACCGACGTCGACAAGGCAGTGGCCGCAGCCAAGGATGCCTTTGAGAATGGACGGTGGGGGAAGATCAGTGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR CCA 90 bp AGAAGAACCCTGGCCGAGGGACCTGATTCCCGCCGCAGACCAGTGTaGCCCCTTCCTTCACGCCATGCTGGCAGTACTCCATCAGCTTCA +
Preference number: 1 (lower is better)
Translates to: RRTLAEGPDSRRRPV*PLPSRHAGSTPSAS
Trigger: TGAAGCTGATGGAGTACTGCCAGCATGGCGTGAAGGAAGGGGCCACACTGGTCTGCGGCGGGAATCAGGTCCCTCGGCCAGGGTTCTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR CCA 90 bp GTCATCATTCCCAAAGAGGATGAGTCCTGCTTTGGTGACCACCCCTaGCCGATGGGCTCCTGGGATGGGCAAAGCGTCTCCCTCGGGCAC +
Preference number: 1 (lower is better)
Translates to: VIIPKEDESCFGDHP*PMGSWDGQSVSLGH
Trigger: GTGCCCGAGGGAGACGCTTTGCCCATCCCAGGAGCCCATCGGCCAGGGGTGGTCACCAAAGCAGGACTCATCCTCTTTGGGAATGATGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000493803.5
3UTR CCA 90 bp CCCACCTCTGTGGAGCCTGTGAACCCGATTTTCCTCACATCAGGATaGTCTGAGAGTCTCTGGCCGACCAGGGAGCCAGATCCTGGGAGG +
Preference number: 1 (lower is better)
Translates to: PTSVEPVNPIFLTSG*SESLWPTREPDPGR
Trigger: CCTCCCAGGATCTGGCTCCCTGGTCGGCCAGAGACTCTCAGACCATCCTGATGTGAGGAAAATCGGGTTCACAGGCTCCACAGAGGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR CCA 90 bp AAGGCATCCTTGGCTGCGGCCACTGCCTTGTCGACGTCGGTGACTTaGGCCAGGGATACCTGGCAGATGACACTTCCATCGGTGGGATTG +
Preference number: 1 (lower is better)
Translates to: KASLAAATALSTSVT*ARDTWQMTLPSVGL
Trigger: CAATCCCACCGATGGAAGTGTCATCTGCCAGGTATCCCTGGCCCAAGTCACCGACGTCGACAAGGCAGTGGCCGCAGCCAAGGATGCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR TCA 90 bp CTCTGTGGAGCCTGTGAACCCGATTTTCCTCACATCAGGATGGTCTaGGAGTCTCTGGCCGACCAGGGAGCCAGATCCTGGGAGGACGTT +
Preference number: 1 (lower is better)
Translates to: LCGACEPDFPHIRMV*ESLADQGARSWEDV
Trigger: AACGTCCTCCCAGGATCTGGCTCCCTGGTCGGCCAGAGACTCTCAGACCATCCTGATGTGAGGAAAATCGGGTTCACAGGCTCCACAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR GCA 90 bp TCCCGGCACCTTGTCGTTCCCGCGGATCCAGTTGTGAATGGCCTCTaGCGGCTGGTCCCAGTTGATCTTGGCTGTCTCCTTCTTCTGAAT +
Preference number: 1 (lower is better)
Translates to: SRHLVVPADPVVNGL*RLVPVDLGCLLLLN
Trigger: ATTCAGAAGAAGGAGACAGCCAAGATCAACTGGGACCAGCCGGCAGAGGCCATTCACAACTGGATCCGCGGGAACGACAAGGTGCCGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000493803.5
3UTR TCA 90 bp CCACATCAGGCAAAGCCTGTCCTTTTGCACGCCACCGGGAGTACTTaGATACCGGCACTCCATCCTTCTCAGCTTCCAGACAGTGGCAGC +
Preference number: 1 (lower is better)
Translates to: PHQAKPVLLHATGST*IPALHPSQLPDSGS
Trigger: GCTGCCACTGTCTGGAAGCTGAGAAGGATGGAGTGCCGGTATTCAAGTACTCCCGGTGGCGTGCAAAAGGACAGGCTTTGCCTGATGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR GCA 90 bp CCGTGCCCTTACCATTTTGTCATCATTCCCAAAGAGGATGAGTCCTaGTTTGGTGACCACCCCTGGCCGATGGGCTCCTGGGATGGGCAA +
Preference number: 1 (lower is better)
Translates to: PCPYHFVIIPKEDES*FGDHPWPMGSWDGQ
Trigger: TTGCCCATCCCAGGAGCCCATCGGCCAGGGGTGGTCACCAAAGCAGGACTCATCCTCTTTGGGAATGATGACAAAATGGTAAGGGCACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493803.5
3UTR GCA 90 bp CTTCACCAGCAGCATTTTGTCATCATTCCCAAAGAGGATGAGTCCTaGTTTGGTGACCACCCCTGGCCGATGGGCTCCTGGGATGGGCAA +
Preference number: 1 (lower is better)
Translates to: LHQQHFVIIPKEDES*FGDHPWPMGSWDGQ
Trigger: TTGCCCATCCCAGGAGCCCATCGGCCAGGGGTGGTCACCAAAGCAGGACTCATCCTCTTTGGGAATGATGACAAAATGCTGCTGGTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR GCA 90 bp CGCAGTAACCAGCTCTGCCTCTGTCAGCTCAAGGACACTGCTGGCTaGCCCCTTAAAGAAGTTCGAGGCCAGGATCATTTTGCCATCCTC +
Preference number: 1 (lower is better)
Translates to: RSNQLCLCQLKDTAG*PLKEVRGQDHFAIL
Trigger: GAGGATGGCAAAATGATCCTGGCCTCGAACTTCTTTAAGGGGGCAGCCAGCAGTGTCCTTGAGCTGACAGAGGCAGAGCTGGTTACTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR GCA 90 bp GACAGGAGCATGGGTGGCTTTGAGCAGGCAAGTGACCCACAGCCGTaGCCTTACCATTTTGTCATCATTCCCAAAGAGGATGAGTCCTGC +
Preference number: 1 (lower is better)
Translates to: DRSMGGFEQASDPQP*PYHFVIIPKEDESC
Trigger: GCAGGACTCATCCTCTTTGGGAATGATGACAAAATGGTAAGGGCACGGCTGTGGGTCACTTGCCTGCTCAAAGCCACCCATGCTCCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493803.5
3UTR CCA 90 bp GAGTACTTGAATACCGGCACTCCATCCTTCTCAGCTTCCAGACAGTaGCAGCTGCTTCCTGCAGTCGCTGTCCCCAATAACTTTGGGCTC +
Preference number: 1 (lower is better)
Translates to: EYLNTGTPSFSASRQ*QLLPAVAVPNNFGL
Trigger: GAGCCCAAAGTTATTGGGGACAGCGACTGCAGGAAGCAGCTGCCACTGTCTGGAAGCTGAGAAGGATGGAGTGCCGGTATTCAAGTACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR GCA 90 bp CAAAGCCTGGTATTTTGCCACCACATCAGGCAAAGCCTGTCCTTTTaGACGCCACCGGGAGTACTTGAATACCGGCACTCCATCCTTCTC +
Preference number: 1 (lower is better)
Translates to: QSLVFCHHIRQSLSF*TPPGVLEYRHSILL
Trigger: GAGAAGGATGGAGTGCCGGTATTCAAGTACTCCCGGTGGCGTGCAAAAGGACAGGCTTTGCCTGATGTGGTGGCAAAATACCAGGCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR CCA 90 bp TCTTCCGCACCTCTTCTACCACTCTCCGCACGAACTCATCATGAATaGAGTCCTCCACAAAGAGTCGGCCTGCTGCAATGCAATTCTCTC +
Preference number: 1 (lower is better)
Translates to: SSAPLLPLSARTHHE*SPPQRVGLLQCNSL
Trigger: GAGAGAATTGCATTGCAGCAGGCCGACTCTTTGTGGAGGACTCCATTCATGATGAGTTCGTGCGGAGAGTGGTAGAAGAGGTGCGGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR TCA 90 bp AAGGAACACTTCTTTGTATTCAGTTCTCTGTTAGAGCCTCTGGTGTaGTGTTTGGGCCCTGACTGGACTGGCTCTCCTCTCCGGTCTCCT +
Preference number: 1 (lower is better)
Translates to: KEHFFVFSSLLEPLV*CLGPDWTGSPLRSP
Trigger: AGGAGACCGGAGAGGAGAGCCAGTCCAGTCAGGGCCCAAACATCACACCAGAGGCTCTAACAGAGAACTGAATACAAAGAAGTGTTCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000511283.2
3UTR TCA 90 bp TTCTTCTCACAAAGACCTTTCTTCAGTATTCGAAGGTCACTGTCTTaGCCCGCAGGTACTCGTTCAGAGCCGCCTCTCCTAGATCTTTGC +
Preference number: 1 (lower is better)
Translates to: FFSQRPFFSIRRSLS*PAGTRSEPPLLDLC
Trigger: GCAAAGATCTAGGAGAGGCGGCTCTGAACGAGTACCTGCGGGTCAAGACAGTGACCTTCGAATACTGAAGAAAGGTCTTTGTGAGAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR-3UTR TCA 90 bp GTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGGGCCAAGGGCTGCTTCTaGCTGGACAGAGGGCGTCCA +
Preference number: 2 (lower is better)
Translates to: VGGAVHPGSRGRGPQPRGAKGCF*LDRGRP
Trigger: TGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGC...CCCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
3UTR CAA 90 bp GCCACTGCCCAGAAGCTGATGGTGGCAGTGGCTGGCAGGTACATGTaGGGCTCCCACCTGTACATCAGCCGGCCCCGGTCCCGCGCACTG +
Preference number: 2 (lower is better)
Translates to: ATAQKLMVAVAGRYM*GSHLYISRPRSRAL
Trigger: CAGTGCGCGGGACCGGGGCCGGCTGATGTACAGGTGGGAGCCCAACATGTACCTGCCAGCCACTGCCACCATCAGCTTCTGGGCAGTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR-3UTR CCA 90 bp GGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGTGGTCTGAGAGTCTCTaGCCGACCAGGGAGCCAGAT +
Preference number: 2 (lower is better)
Translates to: GGRCCAPRLKREGAPATRWSESL*PTREPD
Trigger: ATCTGGCTCCCTGGTCGGCCAGAGACTCTCAGACCA...CCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR-3UTR CCA 90 bp GTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGGCCAGGCCAAATTCCGTaGCATTGGCCCGAGACAGCA +
Preference number: 2 (lower is better)
Translates to: VGGAVHPGSRGRGPQPRGPGQIP*HWPETA
Trigger: TGCTGTCTCGGGCCAATGCCACGGAATTTGGCCTGG...CCCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR-3UTR CCA 90 bp GTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGGTCCAAGATGCAGACATaGTGTGCAGGCAGGAGGGCT +
Preference number: 2 (lower is better)
Translates to: VGGAVHPGSRGRGPQPRGSKMQT*CAGRRA
Trigger: AGCCCTCCTGCCTGCACACCATGTCTGCATCTTGGA...CCCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
3UTR CAA 90 bp GAGGGAAGTGCTTTGTCTGCCTGGGAGGCCCAGCCTGCGCCCACTTaGGAAGCATCCCTTGGCTTCCGCACCTCCTCACCTCCACCAGGC +
Preference number: 2 (lower is better)
Translates to: EGSALSAWEAQPAPT*EASLGFRTSSPPPG
Trigger: GCCTGGTGGAGGTGAGGAGGTGCGGAAGCCAAGGGATGCTTCCAAAGTGGGCGCAGGCTGGGCCTCCCAGGCAGACAAAGCACTTCCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR CAA 90 bp GCAGGAGCTAAGTCCCCTCCAGCCCAGGCTGGTGAGGGAAGTGCTTaGTCTGCCTGGGAGGCCCAGCCTGCGCCCACTTTGGAAGCATCC +
Preference number: 2 (lower is better)
Translates to: AGAKSPPAQAGEGSA*SAWEAQPAPTLEAS
Trigger: GGATGCTTCCAAAGTGGGCGCAGGCTGGGCCTCCCAGGCAGACAAAGCACTTCCCTCACCAGCCTGGGCTGGAGGGGACTTAGCTCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR-3UTR TCA 90 bp GGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGCAAATCCAGACTGTTTaGATCCTCCGAAGGGAGCGG +
Preference number: 2 (lower is better)
Translates to: GGRCCAPRLKREGAPATRQIQTV*ILRRER
Trigger: CCGCTCCCTTCGGAGGATTCAAACAGTCTGGATTTG...CCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR-3UTR GCA 90 bp GTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGGGACAAACACAGTGCCTaGCTGGAGCTTGTCACTGAC +
Preference number: 2 (lower is better)
Translates to: VGGAVHPGSRGRGPQPRGDKHSA*LELVTD
Trigger: GTCAGTGACAAGCTCCAGGCAGGCACTGTGTTTGTC...CCCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR-3UTR GCA 90 bp GGCTGCGGCCACTGCCTTGTCGACGTCGGTGACTTGGGCCAGGGATACCTGGCAAGCGGTTGTACAGCGTaGTCACGGTGTCGTCCGGGA +
Preference number: 2 (lower is better)
Translates to: GCGHCLVDVGDLGQGYLASGCTA*SRCRPG
Trigger: TCCCGGACGACACCGTGAGCACGCTGTACAACCGCT...TGCCAGGTATCCCTGGCCCAAGTCACCGACGTCGACAAGGCAGTGGCCGCAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR CAA 90 bp TCCCGCGCACTGATCTTCCCCCACCGTCCATTCTCAAAGGCATCCTaGGCTGCGGCCACTGCCTTGTCGACGTCGGTGACTTGGGCCAGG +
Preference number: 2 (lower is better)
Translates to: SRALIFPHRPFSKAS*AAATALSTSVTWAR
Trigger: CCTGGCCCAAGTCACCGACGTCGACAAGGCAGTGGCCGCAGCCAAGGATGCCTTTGAGAATGGACGGTGGGGGAAGATCAGTGCGCGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR-3UTR TCA 90 bp GGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCGCCAAGGGCTGCTTCTaGCTGGACAGAGGGCGTCCA +
Preference number: 2 (lower is better)
Translates to: GLLLTGQRASKMQTWCAGAKGCF*LDRGRP
Trigger: TGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGC...GCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
3UTR-3UTR TCA 90 bp CCTGAGTCCAAGGACAGGAGCATGGGTGGCTTTGAGCAGGCAAGTGACCCACAGCCGCGGATCCAGTTGTaGATGGCCTCTGCCGGCTGG +
Preference number: 2 (lower is better)
Translates to: PESKDRSMGGFEQASDPQPRIQL*MASAGW
Trigger: CCAGCCGGCAGAGGCCATTCACAACTGGATCCGCGG...CTGTGGGTCACTTGCCTGCTCAAAGCCACCCATGCTCCTGTCCTTGGACTCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493803.5
3UTR-3UTR GCA 90 bp AGTCTCTGGCCGACCAGGGAGCCAGATCCTGGGAGGACGTTAACCACACCTTTGCCCCCAGGTGGGAGGTaGTGTGCACCCAGGCTCAAG +
Preference number: 2 (lower is better)
Translates to: SLWPTREPDPGRTLTTPLPPGGR*CAPRLK
Trigger: CTTGAGCCTGGGTGCACAGCACCTCCCACCTGGGGG...CAAAGGTGTGGTTAACGTCCTCCCAGGATCTGGCTCCCTGGTCGGCCAGAGACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR-3UTR GCA 90 bp CTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGGCCCCCAGGTGGGAGGTaGTGTGCACCCAGGCTCAAG +
Preference number: 2 (lower is better)
Translates to: LLLTGQRASKMQTWCAGRPPGGR*CAPRLK
Trigger: CTTGAGCCTGGGTGCACAGCACCTCCCACCTGGGGG...CCTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
3UTR-3UTR GCA 90 bp TCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTCCCCCAGGTGGGAGGTaGTGTGCACCCAGGCTCAAG +
Preference number: 2 (lower is better)
Translates to: SEALFSLGGAHLTQPRAAPPGGR*CAPRLK
Trigger: CTTGAGCCTGGGTGCACAGCACCTCCCACCTGGGGG...AGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
3UTR-3UTR CCA 90 bp GCCAAATTCCGTGGCATTGGCCCGAGACAGCACGGCATCCAAGTCCCCATCAGCCGCCGCAGACCAGTGTaGCCCCTTCCTTCACGCCAT +
Preference number: 2 (lower is better)
Translates to: AKFRGIGPRQHGIQVPISRRRPV*PLPSRH
Trigger: ATGGCGTGAAGGAAGGGGCCACACTGGTCTGCGGCG...GCTGATGGGGACTTGGATGCCGTGCTGTCTCGGGCCAATGCCACGGAATTTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR CAA 90 bp CCCCACCGTCCATTCTCAAAGGCATCCTTGGCTGCGGCCACTGCCTaGTCGACGTCGGTGACTTGGGCCAGGGATACCTGGCAGATGACA +
Preference number: 2 (lower is better)
Translates to: PHRPFSKASLAAATA*STSVTWARDTWQMT
Trigger: TGTCATCTGCCAGGTATCCCTGGCCCAAGTCACCGACGTCGACAAGGCAGTGGCCGCAGCCAAGGATGCCTTTGAGAATGGACGGTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR-3UTR TCA 90 bp GCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGGCCAAGGGCTGCTTCTaGCTGGACAGAGGGCGTCCA +
Preference number: 2 (lower is better)
Translates to: AASDWTEGVQDADMVCRQAKGCF*LDRGRP
Trigger: TGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGC...CTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
3UTR-3UTR TCA 90 bp GCCACTGCCCAGAAGCTGATGGTGGCAGTGGCTGGCAGGTACATGTTGGGCTCCGTGATGTTTGGGCCCTaGCTGGACTGGCTCTCCTCT +
Preference number: 2 (lower is better)
Translates to: ATAQKLMVAVAGRYMLGSVMFGP*LDWLSS
Trigger: AGAGGAGAGCCAGTCCAGTCAGGGCCCAAACATCAC...GGAGCCCAACATGTACCTGCCAGCCACTGCCACCATCAGCTTCTGGGCAGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR-3UTR TCA 90 bp ACACTTCCATCGGTGGGATTGATGGTCTCAGAGGTCTTGGCGCCCTCGGCATCCAGAAGGGCAGGACGTTaGGCTCGGCCCCCAAAGCCT +
Preference number: 2 (lower is better)
Translates to: TLPSVGLMVSEVLAPSASRRAGR*ARPPKP
Trigger: AGGCTTTGGGGGCCGAGCTCAACGTCCTGCCCTTCT...GGATGCCGAGGGCGCCAAGACCTCTGAGACCATCAATCCCACCGATGGAAGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR-3UTR GCA 90 bp TCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTCCCCCAGGTGGGAGGTaGTGTGCACCCAGGCTCAAG +
Preference number: 2 (lower is better)
Translates to: SSEALFSLGGAHLTQPRAPPGGR*CAPRLK
Trigger: CTTGAGCCTGGGTGCACAGCACCTCCCACCTGGGGG...AGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
3UTR-3UTR GCA 90 bp CGGTGTCCCTGTCCAGCGGGTTGCCCACCTTCATCTTCCGCACCTCTTCTACCACCCTGTCCAGCGGGTTaGCCACCTTCATCTTCCGCA +
Preference number: 2 (lower is better)
Translates to: RCPCPAGCPPSSSAPLLPPCPAG*PPSSSA
Trigger: TGCGGAAGATGAAGGTGGGCAACCCGCTGGACAGGG...TGGTAGAAGAGGTGCGGAAGATGAAGGTGGGCAACCCGCTGGACAGGGACACCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR-3UTR CCA 90 bp GTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGGCGAACTCATCATGAATaGAGTCCTCCACAAAGAGTC +
Preference number: 2 (lower is better)
Translates to: VGGAVHPGSRGRGPQPRGRTHHE*SPPQRV
Trigger: GACTCTTTGTGGAGGACTCCATTCATGATGAGTTCG...CCCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR-3UTR CCA 90 bp GGCCTGAGTCCAAGGACAGGAGCATGGGTGGCTTTGAGCAGGCAAGTGACCCACGGATCCAGTTGTGAATaGCCTCTGCCGGCTGGTCCC +
Preference number: 2 (lower is better)
Translates to: GLSPRTGAWVALSRQVTHGSSCE*PLPAGP
Trigger: GGGACCAGCCGGCAGAGGCCATTCACAACTGGATCC...GTGGGTCACTTGCCTGCTCAAAGCCACCCATGCTCCTGTCCTTGGACTCAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493803.5
3UTR-3UTR CCA 90 bp TCCATTCTCAAAGGCATCCTTGGCTGCGGCCACTGCCTTGTCGACGTCGGTGACTGGCCGATGGGCTCCTaGGATGGGCAAAGCGTCTCC +
Preference number: 2 (lower is better)
Translates to: SILKGILGCGHCLVDVGDWPMGS*DGQSVS
Trigger: GGAGACGCTTTGCCCATCCCAGGAGCCCATCGGCCA...GTCACCGACGTCGACAAGGCAGTGGCCGCAGCCAAGGATGCCTTTGAGAATGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR-3UTR CCA 90 bp TCCATTCTCAAAGGCATCCTTGGCTGCGGCCACTGCCTTGTCGACGTCGGTGACACCACCCCTGGCCGATaGGCTCCTGGGATGGGCAAA +
Preference number: 2 (lower is better)
Translates to: SILKGILGCGHCLVDVGDTTPGR*APGMGK
Trigger: TTTGCCCATCCCAGGAGCCCATCGGCCAGGGGTGGT...GTCACCGACGTCGACAAGGCAGTGGCCGCAGCCAAGGATGCCTTTGAGAATGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR-3UTR CCA 90 bp CGTCCATTCTCAAAGGCATCCTTGGCTGCGGCCACTGCCTTGTCGACGTCGGTGTGTTTGGGCCCTGACTaGACTGGCTCTCCTCTCCGG +
Preference number: 2 (lower is better)
Translates to: RPFSKASLAAATALSTSVCLGPD*TGSPLR
Trigger: CCGGAGAGGAGAGCCAGTCCAGTCAGGGCCCAAACA...CACCGACGTCGACAAGGCAGTGGCCGCAGCCAAGGATGCCTTTGAGAATGGACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR-3UTR TCA 90 bp GTGCCTGCCTGGAGCTTGTCACTGACATACAGGGCCTTGTTGATGTCCCTGGTGACAAGGTGGGCATGGTaGTTCTGCGGCCCGTGGTCG +
Preference number: 2 (lower is better)
Translates to: VPAWSLSLTYRALLMSLVTRWAW*FCGPWS
Trigger: CGACCACGGGCCGCAGAATCACCATGCCCACCTTGT...CACCAGGGACATCAACAAGGCCCTGTATGTCAGTGACAAGCTCCAGGCAGGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR-3UTR TCA 90 bp GGTGACTTGGGCCAGGGATACCTGGCAGATGACACTTCCATCGGTGGGATTGATCCGCGGATCCAGTTGTaGATGGCCTCTGCCGGCTGG +
Preference number: 2 (lower is better)
Translates to: GDLGQGYLADDTSIGGIDPRIQL*MASAGW
Trigger: CCAGCCGGCAGAGGCCATTCACAACTGGATCCGCGG...ATCAATCCCACCGATGGAAGTGTCATCTGCCAGGTATCCCTGGCCCAAGTCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR-3UTR GCA 90 bp CCCGTGGTCGGTGTCCCTGTCCAGCGGGTTGCCCACCTTCATCTTCCGCACCTCCACAAAGAGTCGGCCTaGTGCAATGCAATTCTCTCC +
Preference number: 2 (lower is better)
Translates to: PVVGVPVQRVAHLHLPHLHKESA*CNAILS
Trigger: GGAGAGAATTGCATTGCAGCAGGCCGACTCTTTGTG...GAGGTGCGGAAGATGAAGGTGGGCAACCCGCTGGACAGGGACACCGACCACGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR-3UTR CCA 90 bp GGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCCAGGGAGCCAGATCCTaGGAGGACGTTAACCACACC +
Preference number: 2 (lower is better)
Translates to: GLLLTGQRASKMQTWCAGQGARS*EDVNHT
Trigger: GGTGTGGTTAACGTCCTCCCAGGATCTGGCTCCCTG...GCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR-3UTR CCA 90 bp CGGTGTCCCTGTCCAGCGGGTTGCCCACCTTCATCTTCCGCACCTCTTCTACCATGGTCTGAGAGTCTCTaGCCGACCAGGGAGCCAGAT +
Preference number: 2 (lower is better)
Translates to: RCPCPAGCPPSSSAPLLPWSESL*PTREPD
Trigger: ATCTGGCTCCCTGGTCGGCCAGAGACTCTCAGACCA...TGGTAGAAGAGGTGCGGAAGATGAAGGTGGGCAACCCGCTGGACAGGGACACCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR-3UTR CCA 90 bp GCCAGGAAGGGTAGGGAGCCCAGCTTTCCCAGAACAGAGAAGTGGGTAAACTGCCAGGCTGAGGGAGTCTaGGGGCTTTGCCCTCAGCGA +
Preference number: 2 (lower is better)
Translates to: ARKGREPSFPRTEKWVNCQAEGV*GLCPQR
Trigger: TCGCTGAGGGCAAAGCCCCCAGACTCCCTCAGCCTG...GCAGTTTACCCACTTCTCTGTTCTGGGAAAGCTGGGCTCCCTACCCTTCCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493803.5
3UTR-3UTR CCA 90 bp CAGTTTCTGTTCACAGGCCTCTGTCCAGGCTCCCGGCACCTTGTCGTTCCCGCGGAATCCCCTCATAGGTaGCTCCTTCCTCAGGCTGAG +
Preference number: 2 (lower is better)
Translates to: QFLFTGLCPGSRHLVVPAESPHR*LLPQAE
Trigger: CTCAGCCTGAGGAAGGAGCCACCTATGAGGGGATTC...CGCGGGAACGACAAGGTGCCGGGAGCCTGGACAGAGGCCTGTGAACAGAAACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000493803.5
3UTR-3UTR CCA 90 bp CTGATGGTGGCAGTGGCTGGCAGGTACATGTTGGGCTCCCACCTGTACATCAGCCCCCCAATGAAGAGCTaGTGGGGCATGCGGACAGTG +
Preference number: 2 (lower is better)
Translates to: LMVAVAGRYMLGSHLYISPPMKS*WGMRTV
Trigger: CACTGTCCGCATGCCCCACCAGCTCTTCATTGGGGG...GCTGATGTACAGGTGGGAGCCCAACATGTACCTGCCAGCCACTGCCACCATCAG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR-3UTR CCA 90 bp GCCACTGCCCAGAAGCTGATGGTGGCAGTGGCTGGCAGGTACATGTTGGGCTCCTCTCAAAGGCATCCTTaGCTGCGGCCACTGCCTTGT +
Preference number: 2 (lower is better)
Translates to: ATAQKLMVAVAGRYMLGSSQRHP*LRPLPC
Trigger: ACAAGGCAGTGGCCGCAGCCAAGGATGCCTTTGAGA...GGAGCCCAACATGTACCTGCCAGCCACTGCCACCATCAGCTTCTGGGCAGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR CAA 90 bp AAAGGCATCCTTGGCTGCGGCCACTGCCTTGTCGACGTCGGTGACTaGGGCCAGGGATACCTGGCAGATGACACTTCCATCGGTGGGATT +
Preference number: 2 (lower is better)
Translates to: KGILGCGHCLVDVGD*GQGYLADDTSIGGI
Trigger: AATCCCACCGATGGAAGTGTCATCTGCCAGGTATCCCTGGCCCAAGTCACCGACGTCGACAAGGCAGTGGCCGCAGCCAAGGATGCCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR-3UTR TCA 90 bp CACGGCATCCAAGTCCCCATCAGCAAACCGAGAGATGATCATGACAGGCCCGAAGCCAAGGGCTGCTTCTaGCTGGACAGAGGGCGTCCA +
Preference number: 2 (lower is better)
Translates to: HGIQVPISKPRDDHDRPEAKGCF*LDRGRP
Trigger: TGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGC...TTCGGGCCTGTCATGATCATCTCTCGGTTTGCTGATGGGGACTTGGATGCCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR-3UTR TCA 90 bp ATTCCCGCCGCAGACCAGTGTGGCCCCTTCCTTCACGCCATGCTGGCAGTACTCCTCATCCCCTTTTCATaGTGTGCTTGCCCACCTCTG +
Preference number: 2 (lower is better)
Translates to: IPAADQCGPFLHAMLAVLLIPFS*CACPPL
Trigger: CAGAGGTGGGCAAGCACATCATGAAAAGGGGATGAG...GAGTACTGCCAGCATGGCGTGAAGGAAGGGGCCACACTGGTCTGCGGCGGGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393431.6
3UTR-3UTR TCA 90 bp ACAAACACAGTGCCTGCCTGGAGCTTGTCACTGACATACAGGGCCTTGTTGATGCCTGGCCGAGGGACCTaGTTCCCGCCGCAGACCAGT +
Preference number: 2 (lower is better)
Translates to: TNTVPAWSLSLTYRALLMPGRGT*FPPQTS
Trigger: ACTGGTCTGCGGCGGGAATCAGGTCCCTCGGCCAGG...CATCAACAAGGCCCTGTATGTCAGTGACAAGCTCCAGGCAGGCACTGTGTTTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR-3UTR TCA 90 bp TTCCCAAAGAGGATGAGTCCTGCTTTGGTGACCACCCCTGGCCGATGGGCTCCTGCCACCGGGAGTACTTaGATACCGGCACTCCATCCT +
Preference number: 2 (lower is better)
Translates to: FPKRMSPALVTTPGRWAPATGST*IPALHP
Trigger: AGGATGGAGTGCCGGTATTCAAGTACTCCCGGTGGC...AGGAGCCCATCGGCCAGGGGTGGTCACCAAAGCAGGACTCATCCTCTTTGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR-3UTR GCA 90 bp GGCCCGAAGGACTCCTCCTTGGCTATGAACATGTGGTCTTCCACGTCTGTGAAACCCCCAGGTGGGAGGTaGTGTGCACCCAGGCTCAAG +
Preference number: 2 (lower is better)
Translates to: GPKDSSLAMNMWSSTSVKPPGGR*CAPRLK
Trigger: CTTGAGCCTGGGTGCACAGCACCTCCCACCTGGGGG...TTTCACAGACGTGGAAGACCACATGTTCATAGCCAAGGAGGAGTCCTTCGGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR-3UTR GCA 90 bp TCATTCCCAAAGAGGATGAGTCCTGCTTTGGTGACCACCCCTGGCCGATGGGCTGGAGTCTGGGGGCTTTaGCCTCAGCGATCAGCCTCA +
Preference number: 2 (lower is better)
Translates to: SFPKRMSPALVTTPGRWAGVWGL*PQRSAS
Trigger: TGAGGCTGATCGCTGAGGGCAAAGCCCCCAGACTCC...AGCCCATCGGCCAGGGGTGGTCACCAAAGCAGGACTCATCCTCTTTGGGAATGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000493803.5
3UTR-3UTR CCA 90 bp GGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGGGCTGCTTCTGACTaGACAGAGGGCGTCCAAGAT +
Preference number: 2 (lower is better)
Translates to: GLLLTGQRASKMQTWCAGRAASD*TEGVQD
Trigger: ATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCT...GCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
3UTR-3UTR CCA 90 bp CGCAGACCAGTGTGGCCCCTTCCTTCACGCCATGCTGGCAGTACTCCATCAGCTCTCAAAGAAGAACCCTaGCCGAGGGACCTGATTCCC +
Preference number: 2 (lower is better)
Translates to: RRPVWPLPSRHAGSTPSALKEEP*PRDLIP
Trigger: GGGAATCAGGTCCCTCGGCCAGGGTTCTTCTTTGAG...AGCTGATGGAGTACTGCCAGCATGGCGTGAAGGAAGGGGCCACACTGGTCTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR-3UTR CCA 90 bp GGTGACTTGGGCCAGGGATACCTGGCAGATGACACTTCCATCGGTGGGATTGATCAGGCTGAGGGAGTCTaGGGGCTTTGCCCTCAGCGA +
Preference number: 2 (lower is better)
Translates to: GDLGQGYLADDTSIGGIDQAEGV*GLCPQR
Trigger: TCGCTGAGGGCAAAGCCCCCAGACTCCCTCAGCCTG...ATCAATCCCACCGATGGAAGTGTCATCTGCCAGGTATCCCTGGCCCAAGTCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR-3UTR CCA 90 bp CCTTCTCAGCTTCCAGACAGTGGCAGCTGCTTCCTGCAGTCGCTGTCCCCAATATGTTTGGGCCCTGACTaGACTGGCTCTCCTCTCCGG +
Preference number: 2 (lower is better)
Translates to: PSQLPDSGSCFLQSLSPICLGPD*TGSPLR
Trigger: CCGGAGAGGAGAGCCAGTCCAGTCAGGGCCCAAACA...TATTGGGGACAGCGACTGCAGGAAGCAGCTGCCACTGTCTGGAAGCTGAGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000511283.2
3UTR CAA 90 bp ATGTCCCTGGTGAAGACACCAGAAGCCAGGCCAAATTCCGTGGCATaGGCCCGAGACAGCACGGCATCCAAGTCCCCATCAGCAAACCGA +
Preference number: 2 (lower is better)
Translates to: MSLVKTPEARPNSVA*ARDSTASKSPSANR
Trigger: TCGGTTTGCTGATGGGGACTTGGATGCCGTGCTGTCTCGGGCCAATGCCACGGAATTTGGCCTGGCTTCTGGTGTCTTCACCAGGGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR-3UTR TCA 90 bp TCACAGGCCTCTGTCCAGGCTCCCGGCACCTTGTCGTTCCCGCGGATCCAGTTGCCTTTCTTATCTCCGTaGATGAGGGTCCAGTTGATG +
Preference number: 2 (lower is better)
Translates to: SQASVQAPGTLSFPRIQLPFLSP*MRVQLM
Trigger: CATCAACTGGACCCTCATTCACGGAGATAAGAAAGG...CAACTGGATCCGCGGGAACGACAAGGTGCCGGGAGCCTGGACAGAGGCCTGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR-3UTR GCA 90 bp GGCAGTACTCCATCAGCTTCACAAGGTGGGCATGGTGATTCTGCGGCCCGTGGTCCTTCCTTCACGCCATaGTGGCAGTACTCCATCAGC +
Preference number: 2 (lower is better)
Translates to: GSTPSASQGGHGDSAARGPSFTP*WQYSIS
Trigger: GCTGATGGAGTACTGCCAGCATGGCGTGAAGGAAGG...ACCACGGGCCGCAGAATCACCATGCCCACCTTGTGAAGCTGATGGAGTACTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR-3UTR GCA 90 bp GGACACCCTGTGCTCAGGACCAGCCGGGTGGTCAGGGACAAATCAGGGTCAGTGAGTGACCCACAGCCGTaGCCTTACCATTTTGTCATC +
Preference number: 2 (lower is better)
Translates to: GHPVLRTSRVVRDKSGSVSDPQP*PYHFVI
Trigger: GATGACAAAATGGTAAGGGCACGGCTGTGGGTCACT...CACTGACCCTGATTTGTCCCTGACCACCCGGCTGGTCCTGAGCACAGGGTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493803.5
3UTR-3UTR CCA 90 bp TTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTCCAAGATGCAGACATaGTGTGCAGGCAGGAGGGCT +
Preference number: 2 (lower is better)
Translates to: FRSFILPGRGTPHPAKGCSKMQT*CAGRRA
Trigger: AGCCCTCCTGCCTGCACACCATGTCTGCATCTTGGA...GCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
3UTR-3UTR CCA 90 bp GCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGTCCAAGATGCAGACATaGTGTGCAGGCAGGAGGGCT +
Preference number: 2 (lower is better)
Translates to: AASDWTEGVQDADMVCRQSKMQT*CAGRRA
Trigger: AGCCCTCCTGCCTGCACACCATGTCTGCATCTTGGA...CTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
3UTR-3UTR CCA 90 bp GCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGAGGGCTGCTTCTGACTaGACAGAGGGCGTCCAAGAT +
Preference number: 2 (lower is better)
Translates to: AASDWTEGVQDADMVCRQRAASD*TEGVQD
Trigger: ATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCT...CTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
3UTR-3UTR CCA 90 bp GGCAGTACTCCATCAGCTTCACAAGGTGGGCATGGTGATTCTGCGGCCCGTGGTAAGCTTTATTCTCCCTaGGAGGGGCACACCTCACCC +
Preference number: 2 (lower is better)
Translates to: GSTPSASQGGHGDSAARGKLYSP*EGHTSP
Trigger: GGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTT...ACCACGGGCCGCAGAATCACCATGCCCACCTTGTGAAGCTGATGGAGTACTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR-3UTR CCA 90 bp GTGCCTGCCTGGAGCTTGTCACTGACATACAGGGCCTTGTTGATGTCCCTGGTGCAGGGAGCCAGATCCTaGGAGGACGTTAACCACACC +
Preference number: 2 (lower is better)
Translates to: VPAWSLSLTYRALLMSLVQGARS*EDVNHT
Trigger: GGTGTGGTTAACGTCCTCCCAGGATCTGGCTCCCTG...CACCAGGGACATCAACAAGGCCCTGTATGTCAGTGACAAGCTCCAGGCAGGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR CAA 90 bp GCCCTTACCATTTTGTCATCATTCCCAAAGAGGATGAGTCCTGCTTaGGTGACCACCCCTGGCCGATGGGCTCCTGGGATGGGCAAAGCG +
Preference number: 2 (lower is better)
Translates to: ALTILSSFPKRMSPA*VTTPGRWAPGMGKA
Trigger: CGCTTTGCCCATCCCAGGAGCCCATCGGCCAGGGGTGGTCACCAAAGCAGGACTCATCCTCTTTGGGAATGATGACAAAATGGTAAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493803.5
3UTR CAA 90 bp ACCAGCAGCATTTTGTCATCATTCCCAAAGAGGATGAGTCCTGCTTaGGTGACCACCCCTGGCCGATGGGCTCCTGGGATGGGCAAAGCG +
Preference number: 2 (lower is better)
Translates to: TSSILSSFPKRMSPA*VTTPGRWAPGMGKA
Trigger: CGCTTTGCCCATCCCAGGAGCCCATCGGCCAGGGGTGGTCACCAAAGCAGGACTCATCCTCTTTGGGAATGATGACAAAATGCTGCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR CAA 90 bp GCCCCTGACTTGAAGAAATCAGTGGAGTCTTCAACCTCCAGGACTTaGGGGAGGATCCGCTGCCAAACACTCCGCACAGCCTCCGCAGTA +
Preference number: 2 (lower is better)
Translates to: APDLKKSVESSTSRT*GRIRCQTLRTASAV
Trigger: TACTGCGGAGGCTGTGCGGAGTGTTTGGCAGCGGATCCTCCCCAAAGTCCTGGAGGTTGAAGACTCCACTGATTTCTTCAAGTCAGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR-3UTR TCA 90 bp GGTTGCCCACCTTCATCTTCCGCACCTCTTCTACCACTCTCCGCACGAACTCATGTGAGTGGGGTCACCTaGGCAGGCTTGATCACCACT +
Preference number: 2 (lower is better)
Translates to: GCPPSSSAPLLPLSARTHVSGVT*AGLITT
Trigger: AGTGGTGATCAAGCCTGCTCAGGTGACCCCACTCAC...ATGAGTTCGTGCGGAGAGTGGTAGAAGAGGTGCGGAAGATGAAGGTGGGCAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR-3UTR TCA 90 bp CCCAATGAAGAGCTGGTGGGGCATGCGGACAGTGCGCTTGTTCACTGCCATTTCTTAGAGCCTCTGGTGTaGTGTTTGGGCCCTGACTGG +
Preference number: 2 (lower is better)
Translates to: PNEELVGHADSALVHCHFLEPLV*CLGPDW
Trigger: CCAGTCAGGGCCCAAACATCACACCAGAGGCTCTAA...GAAATGGCAGTGAACAAGCGCACTGTCCGCATGCCCCACCAGCTCTTCATTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR-3UTR GCA 90 bp GCCAGGAAGGGTAGGGAGCCCAGCTTTCCCAGAACAGAGAAGTGGGTAAACTGCGTTGTGAATGGCCTCTaGCGGCTGGTCCCAGTTGAT +
Preference number: 2 (lower is better)
Translates to: ARKGREPSFPRTEKWVNCVVNGL*RLVPVD
Trigger: ATCAACTGGGACCAGCCGGCAGAGGCCATTCACAAC...GCAGTTTACCCACTTCTCTGTTCTGGGAAAGCTGGGCTCCCTACCCTTCCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493803.5
3UTR-3UTR GCA 90 bp AGTCCAAGGACAGGAGCATGGGTGGCTTTGAGCAGGCAAGTGACCCACAGCCGTAAAGAGGATGAGTCCTaGTTTGGTGACCACCCCTGG +
Preference number: 2 (lower is better)
Translates to: SPRTGAWVALSRQVTHSRKEDES*FGDHPW
Trigger: CCAGGGGTGGTCACCAAAGCAGGACTCATCCTCTTT...ACGGCTGTGGGTCACTTGCCTGCTCAAAGCCACCCATGCTCCTGTCCTTGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493803.5
3UTR-3UTR CCA 90 bp AATGGCCTCTGCCGGCTGGTCCCAGTTGATCTTGGCTGTCTCCTTCTTCTGAATTTTGGTGACCACCCCTaGCCGATGGGCTCCTGGGAT +
Preference number: 2 (lower is better)
Translates to: NGLCRLVPVDLGCLLLLNFGDHP*PMGSWD
Trigger: ATCCCAGGAGCCCATCGGCCAGGGGTGGTCACCAAA...ATTCAGAAGAAGGAGACAGCCAAGATCAACTGGGACCAGCCGGCAGAGGCCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000493803.5
3UTR-3UTR CCA 90 bp CCTTTGATGCCTTCAGGGAAGAGGAAGCGGTTGTACAGCGTGCTCACGGTGTCGTCAGCTTCCAGACAGTaGCAGCTGCTTCCTGCAGTC +
Preference number: 2 (lower is better)
Translates to: PLMPSGKRKRLYSVLTVSSASRQ*QLLPAV
Trigger: GACTGCAGGAAGCAGCTGCCACTGTCTGGAAGCTGA...CGACACCGTGAGCACGCTGTACAACCGCTTCCTCTTCCCTGAAGGCATCAAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR CAA 90 bp CCAGACTGTTTGAATCCTCCGAAGGGAGCGGCCACGTCGGTCTTGTaGTACGTGTTGACAAACACAGTGCCTGCCTGGAGCTTGTCACTG +
Preference number: 2 (lower is better)
Translates to: PDCLNPPKGAATSVL*YVLTNTVPAWSLSL
Trigger: CAGTGACAAGCTCCAGGCAGGCACTGTGTTTGTCAACACGTACAACAAGACCGACGTGGCCGCTCCCTTCGGAGGATTCAAACAGTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR CAA 90 bp ACCACATCAGGCAAAGCCTGTCCTTTTGCACGCCACCGGGAGTACTaGAATACCGGCACTCCATCCTTCTCAGCTTCCAGACAGTGGCAG +
Preference number: 2 (lower is better)
Translates to: TTSGKACPFARHREY*NTGTPSFSASRQWQ
Trigger: CTGCCACTGTCTGGAAGCTGAGAAGGATGGAGTGCCGGTATTCAAGTACTCCCGGTGGCGTGCAAAAGGACAGGCTTTGCCTGATGTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR-3UTR TCA 90 bp ATGTCCCTGGTGAAGACACCAGAAGCCAGGCCAAATTCCGTGGCATTGGCCCGACCTCTGTGGAGCCTGTaGACCCGATTTTCCTCACAT +
Preference number: 2 (lower is better)
Translates to: MSLVKTPEARPNSVALARPLWSL*TRFSSH
Trigger: ATGTGAGGAAAATCGGGTTCACAGGCTCCACAGAGG...TCGGGCCAATGCCACGGAATTTGGCCTGGCTTCTGGTGTCTTCACCAGGGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR-3UTR TCA 90 bp GCACTGATTATCTCCATGGGGATGAATTGGCTGCAGAAGGGCAGGACGTTGAGCCCGGCTGGTCCCAGTTaGTCTTGGCTGTCTCCTTCT +
Preference number: 2 (lower is better)
Translates to: ALIISMGMNWLQKGRTLSPAGPS*SWLSPS
Trigger: AGAAGGAGACAGCCAAGATCAACTGGGACCAGCCGG...GCTCAACGTCCTGCCCTTCTGCAGCCAATTCATCCCCATGGAGATAATCAGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR-3UTR GCA 90 bp CTGGCAGTACTCCATCAGCTTCACAAGGTGGGCATGGTGATTCTGCGGCCCGTGCACAAAGAGTCGGCCTaGTGCAATGCAATTCTCTCC +
Preference number: 2 (lower is better)
Translates to: LAVLHQLHKVGMVILRPVHKESA*CNAILS
Trigger: GGAGAGAATTGCATTGCAGCAGGCCGACTCTTTGTG...CACGGGCCGCAGAATCACCATGCCCACCTTGTGAAGCTGATGGAGTACTGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR-3UTR GCA 90 bp ACACTTCCATCGGTGGGATTGATGGTCTCAGAGGTCTTGGCGCCCTCGGCATCCTTTCCACGTAGTCAATaGTGCACTCGCCCTCCTCAT +
Preference number: 2 (lower is better)
Translates to: TLPSVGLMVSEVLAPSASFPRSQ*CTRPPH
Trigger: ATGAGGAGGGCGAGTGCAGCATTGACTACGTGGAAA...GGATGCCGAGGGCGCCAAGACCTCTGAGACCATCAATCCCACCGATGGAAGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR-3UTR CCA 90 bp CCACTCTCCGCACGAACTCATCATGAATGGAGTCCTCCACAAAGAGTCGGCCTGCTTCAAGGCTGTGAGTaGGGTCACCTGAGCAGGCTT +
Preference number: 2 (lower is better)
Translates to: PLSARTHHEWSPPQRVGLLQGCE*GHLSRL
Trigger: AAGCCTGCTCAGGTGACCCCACTCACAGCCTTGAAG...CAGGCCGACTCTTTGTGGAGGACTCCATTCATGATGAGTTCGTGCGGAGAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR-3UTR CCA 90 bp CCATCAGCTTCACAAGGTGGGCATGGTGATTCTGCGGCCCGTGGTCGGTGTCCCCGAACTCATCATGAATaGAGTCCTCCACAAAGAGTC +
Preference number: 2 (lower is better)
Translates to: PSASQGGHGDSAARGRCPRTHHE*SPPQRV
Trigger: GACTCTTTGTGGAGGACTCCATTCATGATGAGTTCG...GGGACACCGACCACGGGCCGCAGAATCACCATGCCCACCTTGTGAAGCTGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR-3UTR CCA 90 bp AATGGCCTCTGCCGGCTGGTCCCAGTTGATCTTGGCTGTCTCCTTCTTCTGAATATGGCCTCTGCCGGCTaGTCCCAGTTGATCTTGGCT +
Preference number: 2 (lower is better)
Translates to: NGLCRLVPVDLGCLLLLNMASAG*SQLILA
Trigger: AGCCAAGATCAACTGGGACCAGCCGGCAGAGGCCAT...ATTCAGAAGAAGGAGACAGCCAAGATCAACTGGGACCAGCCGGCAGAGGCCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000493803.5
3UTR CAA 90 bp AACACAGTGCCTGCCTGGAGCTTGTCACTGACATACAGGGCCTTGTaGATGTCCCTGGTGAAGACACCAGAAGCCAGGCCAAATTCCGTG +
Preference number: 2 (lower is better)
Translates to: NTVPAWSLSLTYRAL*MSLVKTPEARPNSV
Trigger: CACGGAATTTGGCCTGGCTTCTGGTGTCTTCACCAGGGACATCAACAAGGCCCTGTATGTCAGTGACAAGCTCCAGGCAGGCACTGTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR-3UTR TCA 90 bp GCAGGGACTTTCTTCTCACAAAGACCTTTCTTCAGTATTCGAAGGTCACTGTCTCCTGGCCGAGGGACCTaGTTCCCGCCGCAGACCAGT +
Preference number: 2 (lower is better)
Translates to: AGTFFSQRPFFSIRRSLSPGRGT*FPPQTS
Trigger: ACTGGTCTGCGGCGGGAATCAGGTCCCTCGGCCAGG...AGACAGTGACCTTCGAATACTGAAGAAAGGTCTTTGTGAGAAGAAAGTCCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR-3UTR TCA 90 bp TTCCACGTCTGTGAAAACAGTTGGCTCAAAGAAGAACCCTGGCCGAGGGACCTGAAAGATGATGAGGGGTaGCTTCCCGCCCAGTTCCAG +
Preference number: 2 (lower is better)
Translates to: FHVCENSWLKEEPWPRDLKDDEG*LPAQFQ
Trigger: CTGGAACTGGGCGGGAAGTCACCCCTCATCATCTTT...CAGGTCCCTCGGCCAGGGTTCTTCTTTGAGCCAACTGTTTTCACAGACGTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455064.6
3UTR-3UTR TCA 90 bp AGTGGAGTCTTCAACCTCCAGGACTTTGGGGAGGATCCGCTGCCAAACACTCCGTTATCTCCATGGGGATaGATTGGCTGCAGAAGGGCA +
Preference number: 2 (lower is better)
Translates to: SGVFNLQDFGEDPLPNTPLSPWG*IGCRRA
Trigger: TGCCCTTCTGCAGCCAATTCATCCCCATGGAGATAA...CGGAGTGTTTGGCAGCGGATCCTCCCCAAAGTCCTGGAGGTTGAAGACTCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR-3UTR CCA 90 bp TCCGCACCTCTTCTACCACTCTCCGCACGAACTCATCATGAATGGAGTCCTCCATCCAAGATGCAGACATaGTGTGCAGGCAGGAGGGCT +
Preference number: 2 (lower is better)
Translates to: SAPLLPLSARTHHEWSPPSKMQT*CAGRRA
Trigger: AGCCCTCCTGCCTGCACACCATGTCTGCATCTTGGA...TGGAGGACTCCATTCATGATGAGTTCGTGCGGAGAGTGGTAGAAGAGGTGCGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR-3UTR CCA 90 bp TCTTCCACGTCTGTGAAAACAGTTGGCTCAAAGAAGAACCCTGGCCGAGGGACCAGGGCTGCTTCTGACTaGACAGAGGGCGTCCAAGAT +
Preference number: 2 (lower is better)
Translates to: SSTSVKTVGSKKNPGRGTRAASD*TEGVQD
Trigger: ATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCT...GGTCCCTCGGCCAGGGTTCTTCTTTGAGCCAACTGTTTTCACAGACGTGGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR-3UTR CCA 90 bp GGCCCGAAGGACTCCTCCTTGGCTATGAACATGTGGTCTTCCACGTCTGTGAAAAAGCTTTATTCTCCCTaGGAGGGGCACACCTCACCC +
Preference number: 2 (lower is better)
Translates to: GPKDSSLAMNMWSSTSVKKLYSP*EGHTSP
Trigger: GGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTT...TTTCACAGACGTGGAAGACCACATGTTCATAGCCAAGGAGGAGTCCTTCGGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR-3UTR CCA 90 bp CCTAGATCTTTGCCAAATCCAGACTGTTTGAATCCTCCGAAGGGAGCGGCCACGCAAATTCCGTGGCATTaGCCCGAGACAGCACGGCAT +
Preference number: 2 (lower is better)
Translates to: PRSLPNPDCLNPPKGAATQIPWH*PETARH
Trigger: ATGCCGTGCTGTCTCGGGCCAATGCCACGGAATTTG...CGTGGCCGCTCCCTTCGGAGGATTCAAACAGTCTGGATTTGGCAAAGATCTAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR CAA 90 bp ACAAACACAGTGCCTGCCTGGAGCTTGTCACTGACATACAGGGCCTaGTTGATGTCCCTGGTGAAGACACCAGAAGCCAGGCCAAATTCC +
Preference number: 2 (lower is better)
Translates to: TNTVPAWSLSLTYRA*LMSLVKTPEARPNS
Trigger: GGAATTTGGCCTGGCTTCTGGTGTCTTCACCAGGGACATCAACAAGGCCCTGTATGTCAGTGACAAGCTCCAGGCAGGCACTGTGTTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR CAA 90 bp GTGGCTTTGAGCAGGCAAGTGACCCACAGCCGTGCCCTTACCATTTaGTCATCATTCCCAAAGAGGATGAGTCCTGCTTTGGTGACCACC +
Preference number: 2 (lower is better)
Translates to: VALSRQVTHSRALTI*SSFPKRMSPALVTT
Trigger: GGTGGTCACCAAAGCAGGACTCATCCTCTTTGGGAATGATGACAAAATGGTAAGGGCACGGCTGTGGGTCACTTGCCTGCTCAAAGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493803.5
3UTR CAA 90 bp CCAGACAGTGGCAGCTGCTTCCTGCAGTCGCTGTCCCCAATAACTTaGGGCTCTCTGCCTTCCACTCTTCAATACCCAAGGAACACTTCT +
Preference number: 2 (lower is better)
Translates to: PDSGSCFLQSLSPIT*GSLPSTLQYPRNTS
Trigger: AGAAGTGTTCCTTGGGTATTGAAGAGTGGAAGGCAGAGAGCCCAAAGTTATTGGGGACAGCGACTGCAGGAAGCAGCTGCCACTGTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000511283.2
3UTR-3UTR CCA 90 bp ACAAACACAGTGCCTGCCTGGAGCTTGTCACTGACATACAGGGCCTTGTTGATGTCCAAGATGCAGACATaGTGTGCAGGCAGGAGGGCT +
Preference number: 2 (lower is better)
Translates to: TNTVPAWSLSLTYRALLMSKMQT*CAGRRA
Trigger: AGCCCTCCTGCCTGCACACCATGTCTGCATCTTGGA...CATCAACAAGGCCCTGTATGTCAGTGACAAGCTCCAGGCAGGCACTGTGTTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR-3UTR CCA 90 bp AATGGCCTCTGCCGGCTGGTCCCAGTTGATCTTGGCTGTCTCCTTCTTCTGAATCCCAGAACAGAGAAGTaGGTAAACTGCCTCGGACAC +
Preference number: 2 (lower is better)
Translates to: NGLCRLVPVDLGCLLLLNPRTEK*VNCLGH
Trigger: GTGTCCGAGGCAGTTTACCCACTTCTCTGTTCTGGG...ATTCAGAAGAAGGAGACAGCCAAGATCAACTGGGACCAGCCGGCAGAGGCCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493803.5
3UTR-3UTR TCA 90 bp ACAAACACAGTGCCTGCCTGGAGCTTGTCACTGACATACAGGGCCTTGTTGATGCCTCTGTGGAGCCTGTaGACCCGATTTTCCTCACAT +
Preference number: 2 (lower is better)
Translates to: TNTVPAWSLSLTYRALLMPLWSL*TRFSSH
Trigger: ATGTGAGGAAAATCGGGTTCACAGGCTCCACAGAGG...CATCAACAAGGCCCTGTATGTCAGTGACAAGCTCCAGGCAGGCACTGTGTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR-3UTR TCA 90 bp CCCAAAGAGGATGAGTCCTGCTTTGGTGACCACCCCTGGCCGATGGGCTCCTGGTGTTCAGCGTTGAGTTaGAAAATGTCAGTTTCTGTT +
Preference number: 2 (lower is better)
Translates to: PKEDESCFGDHPWPMGSWCSALS*KMSVSV
Trigger: AACAGAAACTGACATTTTTCAACTCAACGCTGAACA...CCAGGAGCCCATCGGCCAGGGGTGGTCACCAAAGCAGGACTCATCCTCTTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000493803.5
3UTR CAA 90 bp TCAGCAAACCGAGAGATGATCATGACAGGCCCGAAGGACTCCTCCTaGGCTATGAACATGTGGTCTTCCACGTCTGTGAAAACAGTTGGC +
Preference number: 2 (lower is better)
Translates to: SANREMIMTGPKDSS*AMNMWSSTSVKTVG
Trigger: GCCAACTGTTTTCACAGACGTGGAAGACCACATGTTCATAGCCAAGGAGGAGTCCTTCGGGCCTGTCATGATCATCTCTCGGTTTGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR-3UTR TCA 90 bp AGGGGCAGGGACTTTCTTCTCACAAAGACCTTTCTTCAGTATTCGAAGGTCACTCACATCAGGATGGTCTaGGAGTCTCTGGCCGACCAG +
Preference number: 2 (lower is better)
Translates to: RGRDFLLTKTFLQYSKVTHIRMV*ESLADQ
Trigger: CTGGTCGGCCAGAGACTCTCAGACCATCCTGATGTG...AGTGACCTTCGAATACTGAAGAAAGGTCTTTGTGAGAAGAAAGTCCCTGCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR-3UTR TCA 90 bp CCTAGATCTTTGCCAAATCCAGACTGTTTGAATCCTCCGAAGGGAGCGGCCACGGGTCTTCCACGTCTGTaGAAACAGTTGGCTCAAAGA +
Preference number: 2 (lower is better)
Translates to: PRSLPNPDCLNPPKGAATGLPRL*KQLAQR
Trigger: TCTTTGAGCCAACTGTTTTCACAGACGTGGAAGACC...CGTGGCCGCTCCCTTCGGAGGATTCAAACAGTCTGGATTTGGCAAAGATCTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR-3UTR GCA 90 bp AGGCCTGAAGTGTTCAGCGTTGAGTTGAAAAATGTCAGTTTCTGTTCACAGGCCGAGAAGTGGGTAAACTaGCTCGGACACCCTGTGCTC +
Preference number: 2 (lower is better)
Translates to: RPEVFSVELKNVSFCSQAEKWVN*LGHPVL
Trigger: GAGCACAGGGTGTCCGAGGCAGTTTACCCACTTCTC...GGCCTGTGAACAGAAACTGACATTTTTCAACTCAACGCTGAACACTTCAGGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493803.5
3UTR CAA 90 bp GAGTCCTCCACAAAGAGTCGGCCTGCTGCAATGCAATTCTCTCCTTaGTTGAAGAAAACAGAACTCATCCCCATCTGCACAGCCTTGTTG +
Preference number: 2 (lower is better)
Translates to: ESSTKSRPAAMQFSP*LKKTELIPICTALL
Trigger: CAACAAGGCTGTGCAGATGGGGATGAGTTCTGTTTTCTTCAACAAAGGAGAGAATTGCATTGCAGCAGGCCGACTCTTTGTGGAGGACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455064.6
3UTR-3UTR TCA 90 bp CAGGGACTTTCTTCTCACAAAGACCTTTCTTCAGTATTCGAAGGTCACTGTCTTCACATCAGGATGGTCTaGGAGTCTCTGGCCGACCAG +
Preference number: 2 (lower is better)
Translates to: QGLSSHKDLSSVFEGHCLHIRMV*ESLADQ
Trigger: CTGGTCGGCCAGAGACTCTCAGACCATCCTGATGTG...AAGACAGTGACCTTCGAATACTGAAGAAAGGTCTTTGTGAGAAGAAAGTCCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR-3UTR TCA 90 bp ATAACTTTGGGCTCTCTGCCTTCCACTCTTCAATACCCAAGGAACACTTCTTTGTTAGAGCCTCTGGTGTaGTGTTTGGGCCCTGACTGG +
Preference number: 2 (lower is better)
Translates to: ITLGSLPSTLQYPRNTSLLEPLV*CLGPDW
Trigger: CCAGTCAGGGCCCAAACATCACACCAGAGGCTCTAA...CAAAGAAGTGTTCCTTGGGTATTGAAGAGTGGAAGGCAGAGAGCCCAAAGTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000511283.2
3UTR-3UTR CCA 90 bp TTGGGCTCTCTGCCTTCCACTCTTCAATACCCAAGGAACACTTCTTTGTATTCACTCTGGTGTGATGTTTaGGCCCTGACTGGACTGGCT +
Preference number: 2 (lower is better)
Translates to: LGSLPSTLQYPRNTSLYSLWCDV*ALTGLA
Trigger: AGCCAGTCCAGTCAGGGCCCAAACATCACACCAGAG...TGAATACAAAGAAGTGTTCCTTGGGTATTGAAGAGTGGAAGGCAGAGAGCCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000511283.2
3UTR CAA 90 bp TTTCTTCTCACAAAGACCTTTCTTCAGTATTCGAAGGTCACTGTCTaGACCCGCAGGTACTCGTTCAGAGCCGCCTCTCCTAGATCTTTG +
Preference number: 2 (lower is better)
Translates to: FLLTKTFLQYSKVTV*TRRYSFRAASPRSL
Trigger: CAAAGATCTAGGAGAGGCGGCTCTGAACGAGTACCTGCGGGTCAAGACAGTGACCTTCGAATACTGAAGAAAGGTCTTTGTGAGAAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR-3UTR GCA 90 bp GCAGGGACTTTCTTCTCACAAAGACCTTTCTTCAGTATTCGAAGGTCACTGTCTCAGCTTTTCATGATGTaGTTGCCCACCTCTGTGGAG +
Preference number: 2 (lower is better)
Translates to: AGTFFSQRPFFSIRRSLSQLFMM*LPTSVE
Trigger: CTCCACAGAGGTGGGCAAGCACATCATGAAAAGCTG...AGACAGTGACCTTCGAATACTGAAGAAAGGTCTTTGTGAGAAGAAAGTCCCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455064.6
3UTR-3UTR GCA 90 bp CAGGGACTTTCTTCTCACAAAGACCTTTCTTCAGTATTCGAAGGTCACTGTCTTCCACACCTTTGGGAATaGCGGCCTTTAATGTCAGCT +
Preference number: 2 (lower is better)
Translates to: QGLSSHKDLSSVFEGHCLPHLWE*RPLMSA
Trigger: AGCTGACATTAAAGGCCGGCATTCCCAAAGGTGTGG...AAGACAGTGACCTTCGAATACTGAAGAAAGGTCTTTGTGAGAAGAAAGTCCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR-3UTR CAA 90 bp GTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGGGTGCCTGCCTGGAGCTaGTCACTGACATACAGGGCC +
Preference number: 3 (lower is better)
Translates to: VGGAVHPGSRGRGPQPRGVPAWS*SLTYRA
Trigger: GGCCCTGTATGTCAGTGACAAGCTCCAGGCAGGCAC...CCCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR CCA 72 bp TCCTGCTTTGGTGACCACCCCTGGCCGATGGGCTCCTaGGATGGGCAAAGCGTCTCCCTCGGGCACCAGGCC +
Preference number: 3 (lower is better)
Translates to: SCFGDHPWPMGS*DGQSVSLGHQA
Trigger: GGCCTGGTGCCCGAGGGAGACGCTTTGCCCATCCCAGGAGCCCATCGGCCAGGGGTGGTCACCAAAGCAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000493803.5
3UTR-3UTR CAA 90 bp CCGAGGGACCTGATTCCCGCCGCAGACCAGTGTGGCCCCTTCCTTCACGCCATGTCCCTGTCCAGCGGGTaGCCCACCTTCATCTTCCGC +
Preference number: 3 (lower is better)
Translates to: PRDLIPAADQCGPFLHAMSLSSG*PTFIFR
Trigger: GCGGAAGATGAAGGTGGGCAACCCGCTGGACAGGGA...CATGGCGTGAAGGAAGGGGCCACACTGGTCTGCGGCGGGAATCAGGTCCCTCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR-3UTR CAA 90 bp CTGAGGGAGTCTGGGGGCTTTGCCCTCAGCGATCAGCCTCACGGCCTGCACCATGGGAGTCTGGGGGCTTaGCCCTCAGCGATCAGCCTC +
Preference number: 3 (lower is better)
Translates to: LRESGGFALSDQPHGLHHGSLGA*PSAISL
Trigger: GAGGCTGATCGCTGAGGGCAAAGCCCCCAGACTCCC...ATGGTGCAGGCCGTGAGGCTGATCGCTGAGGGCAAAGCCCCCAGACTCCCTCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000493803.5
3UTR-3UTR CAA 90 bp GGCAGGTACATGTTGGGCTCCCACCTGTACATCAGCCGGCCCCGGTCCCGCGCATTCTCAAAGGCATCCTaGGCTGCGGCCACTGCCTTG +
Preference number: 3 (lower is better)
Translates to: GRYMLGSHLYISRPRSRAFSKAS*AAATAL
Trigger: CAAGGCAGTGGCCGCAGCCAAGGATGCCTTTGAGAA...TGCGCGGGACCGGGGCCGGCTGATGTACAGGTGGGAGCCCAACATGTACCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR TCA 72 bp CCCACCTGTACATCAGCCGGCCCCGGTCCCGCGCACTaGTCTTCCCCCACCGTCCATTCTCAAAGGCATCCT +
Preference number: 3 (lower is better)
Translates to: PTCTSAGPGPAH*SSPTVHSQRHP
Trigger: AGGATGCCTTTGAGAATGGACGGTGGGGGAAGATCAGTGCGCGGGACCGGGGCCGGCTGATGTACAGGTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR CCA 72 bp CTTTGTCTGCCTGGGAGGCCCAGCCTGCGCCCACTTTaGAAGCATCCCTTGGCTTCCGCACCTCCTCACCTC +
Preference number: 3 (lower is better)
Translates to: LCLPGRPSLRPL*KHPLASAPPHL
Trigger: GAGGTGAGGAGGTGCGGAAGCCAAGGGATGCTTCCAAAGTGGGCGCAGGCTGGGCCTCCCAGGCAGACAAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR-3UTR CAA 90 bp TCATTCCCAAAGAGGATGAGTCCTGCTTTGGTGACCACCCCTGGCCGATGGGCTCAGGCTCCCGGCACCTaGTCGTTCCCGCGGATCCAG +
Preference number: 3 (lower is better)
Translates to: SFPKRMSPALVTTPGRWAQAPGT*SFPRIQ
Trigger: CTGGATCCGCGGGAACGACAAGGTGCCGGGAGCCTG...AGCCCATCGGCCAGGGGTGGTCACCAAAGCAGGACTCATCCTCTTTGGGAATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000493803.5
3UTR TCA 72 bp GCTCCCGGCACCTTGTCGTTCCCGCGGATCCAGTTGTaGATGGCCTCTGCCGGCTGGTCCCAGTTGATCTTG +
Preference number: 3 (lower is better)
Translates to: APGTLSFPRIQL*MASAGWSQLIL
Trigger: CAAGATCAACTGGGACCAGCCGGCAGAGGCCATTCACAACTGGATCCGCGGGAACGACAAGGTGCCGGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000493803.5
3UTR GCA 72 bp CCAAACACTCCGCACAGCCTCCGCAGTAACCAGCTCTaGCTCTGTCAGCTCAAGGACACTGCTGGCTGCCCC +
Preference number: 3 (lower is better)
Translates to: PNTPHSLRSNQL*LCQLKDTAGCP
Trigger: GGGGCAGCCAGCAGTGTCCTTGAGCTGACAGAGGCAGAGCTGGTTACTGCGGAGGCTGTGCGGAGTGTTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR GCA 72 bp CTTCCCCCACCGTCCATTCTCAAAGGCATCCTTGGCTaGGGCCACTGCCTTGTCGACGTCGGTGACTTGGGC +
Preference number: 3 (lower is better)
Translates to: LPPPSILKGILG*GHCLVDVGDLG
Trigger: GCCCAAGTCACCGACGTCGACAAGGCAGTGGCCGCAGCCAAGGATGCCTTTGAGAATGGACGGTGGGGGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR CCA 72 bp GGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGACTaGACAGAGGGCGTCCAAGATGCAGACATGGTGTGC +
Preference number: 3 (lower is better)
Translates to: GAHLTQPRAASD*TEGVQDADMVC
Trigger: GCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
3UTR TCA 72 bp TGGCAGTACTCCATCAGCTTCACAAGGTGGGCATGGTaGTTCTGCGGCCCGTGGTCGGTGTCCCTGTCCAGC +
Preference number: 3 (lower is better)
Translates to: WQYSISFTRWAW*FCGPWSVSLSS
Trigger: GCTGGACAGGGACACCGACCACGGGCCGCAGAATCACCATGCCCACCTTGTGAAGCTGATGGAGTACTGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR GCA 72 bp CCGTCCATTCTCAAAGGCATCCTTGGCTGCGGCCACTaGCTTGTCGACGTCGGTGACTTGGGCCAGGGATAC +
Preference number: 3 (lower is better)
Translates to: PSILKGILGCGH*LVDVGDLGQGY
Trigger: GTATCCCTGGCCCAAGTCACCGACGTCGACAAGGCAGTGGCCGCAGCCAAGGATGCCTTTGAGAATGGACGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR CCA 72 bp TTGGCTGCGGCCACTGCCTTGTCGACGTCGGTGACTTaGGCCAGGGATACCTGGCAGATGACACTTCCATCG +
Preference number: 3 (lower is better)
Translates to: LAAATALSTSVT*ARDTWQMTLPS
Trigger: CGATGGAAGTGTCATCTGCCAGGTATCCCTGGCCCAAGTCACCGACGTCGACAAGGCAGTGGCCGCAGCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR CCA 72 bp CCGTGCCACTGCCCAGAAGCTGATGGTGGCAGTGGCTaGCAGGTACATGTTGGGCTCCCACCTGTACATCAG +
Preference number: 3 (lower is better)
Translates to: PCHCPEADGGSG*QVHVGLPPVHQ
Trigger: CTGATGTACAGGTGGGAGCCCAACATGTACCTGCCAGCCACTGCCACCATCAGCTTCTGGGCAGTGGCACGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR-3UTR CAA 90 bp AGTCCAAGGACAGGAGCATGGGTGGCTTTGAGCAGGCAAGTGACCCACAGCCGTAGGATGAGTCCTGCTTaGGTGACCACCCCTGGCCGA +
Preference number: 3 (lower is better)
Translates to: SPRTGAWVALSRQVTHSRRMSPA*VTTPGR
Trigger: TCGGCCAGGGGTGGTCACCAAAGCAGGACTCATCCT...ACGGCTGTGGGTCACTTGCCTGCTCAAAGCCACCCATGCTCCTGTCCTTGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493803.5
3UTR-3UTR CAA 90 bp CACGGCATCCAAGTCCCCATCAGCAAACCGAGAGATGATCATGACAGGCCCGAATCCCTGTCCAGCGGGTaGCCCACCTTCATCTTCCGC +
Preference number: 3 (lower is better)
Translates to: HGIQVPISKPRDDHDRPESLSSG*PTFIFR
Trigger: GCGGAAGATGAAGGTGGGCAACCCGCTGGACAGGGA...TTCGGGCCTGTCATGATCATCTCTCGGTTTGCTGATGGGGACTTGGATGCCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR-3UTR CAA 90 bp AATGGCCTCTGCCGGCTGGTCCCAGTTGATCTTGGCTGTCTCCTTCTTCTGAATGGGAGTCTGGGGGCTTaGCCCTCAGCGATCAGCCTC +
Preference number: 3 (lower is better)
Translates to: NGLCRLVPVDLGCLLLLNGSLGA*PSAISL
Trigger: GAGGCTGATCGCTGAGGGCAAAGCCCCCAGACTCCC...ATTCAGAAGAAGGAGACAGCCAAGATCAACTGGGACCAGCCGGCAGAGGCCATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000493803.5
3UTR-3UTR CAA 90 bp TTCCCAAAGAGGATGAGTCCTGCTTTGGTGACCACCCCTGGCCGATGGGCTCCTCTCCATGGGGATGAATaGGCTGCAGAAGGGCAGGAC +
Preference number: 3 (lower is better)
Translates to: FPKRMSPALVTTPGRWAPLHGDE*AAEGQD
Trigger: GTCCTGCCCTTCTGCAGCCAATTCATCCCCATGGAG...AGGAGCCCATCGGCCAGGGGTGGTCACCAAAGCAGGACTCATCCTCTTTGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR-3UTR CAA 90 bp GGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCCTTTTCATGATGTGCTaGCCCACCTCTGTGGAGCCT +
Preference number: 3 (lower is better)
Translates to: GLLLTGQRASKMQTWCAGLFMMC*PTSVEP
Trigger: AGGCTCCACAGAGGTGGGCAAGCACATCATGAAAAG...GCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR-3UTR CAA 90 bp GGTGACTTGGGCCAGGGATACCTGGCAGATGACACTTCCATCGGTGGGATTGATCGCCACCGGGAGTACTaGAATACCGGCACTCCATCC +
Preference number: 3 (lower is better)
Translates to: GDLGQGYLADDTSIGGIDRHREY*NTGTPS
Trigger: GGATGGAGTGCCGGTATTCAAGTACTCCCGGTGGCG...ATCAATCCCACCGATGGAAGTGTCATCTGCCAGGTATCCCTGGCCCAAGTCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR TCA 72 bp GCCTGTGAACCCGATTTTCCTCACATCAGGATGGTCTaGGAGTCTCTGGCCGACCAGGGAGCCAGATCCTGG +
Preference number: 3 (lower is better)
Translates to: ACEPDFPHIRMV*ESLADQGARSW
Trigger: CCAGGATCTGGCTCCCTGGTCGGCCAGAGACTCTCAGACCATCCTGATGTGAGGAAAATCGGGTTCACAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR GCA 72 bp CTTGTCGTTCCCGCGGATCCAGTTGTGAATGGCCTCTaGCGGCTGGTCCCAGTTGATCTTGGCTGTCTCCTT +
Preference number: 3 (lower is better)
Translates to: LVVPADPVVNGL*RLVPVDLGCLL
Trigger: AAGGAGACAGCCAAGATCAACTGGGACCAGCCGGCAGAGGCCATTCACAACTGGATCCGCGGGAACGACAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000493803.5
3UTR CCA 72 bp CAGAAGGGCAGGACGTTGAGCTCGGCCCCCAAAGCCTaGTATTTTGCCACCACATCAGGCAAAGCCTGTCCT +
Preference number: 3 (lower is better)
Translates to: QKGRTLSSAPKA*YFATTSGKACP
Trigger: AGGACAGGCTTTGCCTGATGTGGTGGCAAAATACCAGGCTTTGGGGGCCGAGCTCAACGTCCTGCCCTTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR-3UTR CAA 90 bp AATGGCCTCTGCCGGCTGGTCCCAGTTGATCTTGGCTGTCTCCTTCTTCTGAATGCCGGCTGGTCCCAGTaGATCTTGGCTGTCTCCTTC +
Preference number: 3 (lower is better)
Translates to: NGLCRLVPVDLGCLLLLNAGWSQ*ILAVSF
Trigger: GAAGGAGACAGCCAAGATCAACTGGGACCAGCCGGC...ATTCAGAAGAAGGAGACAGCCAAGATCAACTGGGACCAGCCGGCAGAGGCCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000493803.5
3UTR TCA 72 bp TTCTCTGTTAGAGCCTCTGGTGTGATGTTTGGGCCCTaGCTGGACTGGCTCTCCTCTCCGGTCTCCTCCTCT +
Preference number: 3 (lower is better)
Translates to: FSVRASGVMFGP*LDWLSSPVSSS
Trigger: AGAGGAGGAGACCGGAGAGGAGAGCCAGTCCAGTCAGGGCCCAAACATCACACCAGAGGCTCTAACAGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000511283.2
3UTR TCA 72 bp CTCCACCAGCCTCACAACGTCCACAGACGCGGCCCCTaGCTTGAAGAAATCAGTGGAGTCTTCAACCTCCAG +
Preference number: 3 (lower is better)
Translates to: LHQPHNVHRRGP*LEEISGVFNLQ
Trigger: CTGGAGGTTGAAGACTCCACTGATTTCTTCAAGTCAGGGGCCGCGTCTGTGGACGTTGTGAGGCTGGTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR CCA 72 bp CCGATTTTCCTCACATCAGGATGGTCTGAGAGTCTCTaGCCGACCAGGGAGCCAGATCCTGGGAGGACGTTA +
Preference number: 3 (lower is better)
Translates to: PIFLTSGWSESL*PTREPDPGRTL
Trigger: TAACGTCCTCCCAGGATCTGGCTCCCTGGTCGGCCAGAGACTCTCAGACCATCCTGATGTGAGGAAAATCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR CCA 72 bp GTGGAGCCTGTGAACCCGATTTTCCTCACATCAGGATaGTCTGAGAGTCTCTGGCCGACCAGGGAGCCAGAT +
Preference number: 3 (lower is better)
Translates to: VEPVNPIFLTSG*SESLWPTREPD
Trigger: ATCTGGCTCCCTGGTCGGCCAGAGACTCTCAGACCATCCTGATGTGAGGAAAATCGGGTTCACAGGCTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR-3UTR CAA 90 bp GTGGACGGTCTCTCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCCGAAGGACTCCTCCTaGGCTATGAACATGTGGTCT +
Preference number: 3 (lower is better)
Translates to: VDGLSSEALFSLGGAHLTPKDSS*AMNMWS
Trigger: AGACCACATGTTCATAGCCAAGGAGGAGTCCTTCGG...GGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGAGAGACCGTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455064.6
3UTR-3UTR CAA 90 bp ACACTTCCATCGGTGGGATTGATGGTCTCAGAGGTCTTGGCGCCCTCGGCATCCCCAAAGCCTGGTATTTaGCCACCACATCAGGCAAAG +
Preference number: 3 (lower is better)
Translates to: TLPSVGLMVSEVLAPSASPKPGI*PPHQAK
Trigger: CTTTGCCTGATGTGGTGGCAAAATACCAGGCTTTGG...GGATGCCGAGGGCGCCAAGACCTCTGAGACCATCAATCCCACCGATGGAAGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR TCA 72 bp TTTCCATTTTCTCCAGAGGAGCCTAGGGTCTTCCTGTaGGGCCTGAGTCCAAGGACAGGAGCATGGGTGGCT +
Preference number: 3 (lower is better)
Translates to: FPFSPEEPRVFL*GLSPRTGAWVA
Trigger: AGCCACCCATGCTCCTGTCCTTGGACTCAGGCCTCACAGGAAGACCCTAGGCTCCTCTGGAGAAAATGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493803.5
3UTR TCA 72 bp GCAAAGCCTGTCCTTTTGCACGCCACCGGGAGTACTTaGATACCGGCACTCCATCCTTCTCAGCTTCCAGAC +
Preference number: 3 (lower is better)
Translates to: AKPVLLHATGST*IPALHPSQLPD
Trigger: GTCTGGAAGCTGAGAAGGATGGAGTGCCGGTATTCAAGTACTCCCGGTGGCGTGCAAAAGGACAGGCTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR TCA 72 bp CCAGCCTCACAACGTCCACAGACGCGGCCCCTGACTTaGAGAAATCAGTGGAGTCTTCAACCTCCAGGACTT +
Preference number: 3 (lower is better)
Translates to: PASQRPQTRPLT*RNQWSLQPPGL
Trigger: AAGTCCTGGAGGTTGAAGACTCCACTGATTTCTTCAAGTCAGGGGCCGCGTCTGTGGACGTTGTGAGGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR GCA 72 bp CAGCATTTTGTCATCATTCCCAAAGAGGATGAGTCCTaGTTTGGTGACCACCCCTGGCCGATGGGCTCCTGG +
Preference number: 3 (lower is better)
Translates to: QHFVIIPKEDES*FGDHPWPMGSW
Trigger: CCAGGAGCCCATCGGCCAGGGGTGGTCACCAAAGCAGGACTCATCCTCTTTGGGAATGATGACAAAATGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR-3UTR CAA 90 bp CCGAGGGACCTGATTCCCGCCGCAGACCAGTGTGGCCCCTTCCTTCACGCCATGATGCAATTCTCTCCTTaGTTGAAGAAAACAGAACTC +
Preference number: 3 (lower is better)
Translates to: PRDLIPAADQCGPFLHAMMQFSP*LKKTEL
Trigger: GAGTTCTGTTTTCTTCAACAAAGGAGAGAATTGCAT...CATGGCGTGAAGGAAGGGGCCACACTGGTCTGCGGCGGGAATCAGGTCCCTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR-3UTR CAA 90 bp GGCCCGAAGGACTCCTCCTTGGCTATGAACATGTGGTCTTCCACGTCTGTGAAACCCATCTGCACAGCCTaGTTGAGGTCACAGTCAGCA +
Preference number: 3 (lower is better)
Translates to: GPKDSSLAMNMWSSTSVKPICTA*LRSQSA
Trigger: TGCTGACTGTGACCTCAACAAGGCTGTGCAGATGGG...TTTCACAGACGTGGAAGACCACATGTTCATAGCCAAGGAGGAGTCCTTCGGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455064.6
3UTR GCA 72 bp TACCATTTTGTCATCATTCCCAAAGAGGATGAGTCCTaGTTTGGTGACCACCCCTGGCCGATGGGCTCCTGG +
Preference number: 3 (lower is better)
Translates to: YHFVIIPKEDES*FGDHPWPMGSW
Trigger: CCAGGAGCCCATCGGCCAGGGGTGGTCACCAAAGCAGGACTCATCCTCTTTGGGAATGATGACAAAATGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493803.5
3UTR GCA 72 bp GTATTTTGCCACCACATCAGGCAAAGCCTGTCCTTTTaGACGCCACCGGGAGTACTTGAATACCGGCACTCC +
Preference number: 3 (lower is better)
Translates to: VFCHHIRQSLSF*TPPGVLEYRHS
Trigger: GGAGTGCCGGTATTCAAGTACTCCCGGTGGCGTGCAAAAGGACAGGCTTTGCCTGATGTGGTGGCAAAATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR CCA 72 bp CCTCTTCTACCACTCTCCGCACGAACTCATCATGAATaGAGTCCTCCACAAAGAGTCGGCCTGCTGCAATGC +
Preference number: 3 (lower is better)
Translates to: PLLPLSARTHHE*SPPQRVGLLQC
Trigger: GCATTGCAGCAGGCCGACTCTTTGTGGAGGACTCCATTCATGATGAGTTCGTGCGGAGAGTGGTAGAAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR CCA 72 bp TCCTCATCGTCCCCTCGCAGCTTCCTCACTAACAGCTaGATGAAGTCCCCAAAGGTGGATGCCATGTACACA +
Preference number: 3 (lower is better)
Translates to: SSSSPRSFLTNS*MKSPKVDAMYT
Trigger: TGTGTACATGGCATCCACCTTTGGGGACTTCATCCAGCTGTTAGTGAGGAAGCTGCGAGGGGACGATGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR-3UTR CAA 90 bp TCTCCGCACGAACTCATCATGAATGGAGTCCTCCACAAAGAGTCGGCCTGCTGCATCTGCACAGCCTTGTaGAGGTCACAGTCAGCAAAG +
Preference number: 3 (lower is better)
Translates to: SPHELIMNGVLHKESACCICTAL*RSQSAK
Trigger: CTTTGCTGACTGTGACCTCAACAAGGCTGTGCAGAT...GCAGCAGGCCGACTCTTTGTGGAGGACTCCATTCATGATGAGTTCGTGCGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455064.6
3UTR-3UTR CAA 90 bp TCCATTCTCAAAGGCATCCTTGGCTGCGGCCACTGCCTTGTCGACGTCGGTGACTTCACCAGCAGCATTTaGTCATCATTCCCAAAGAGG +
Preference number: 3 (lower is better)
Translates to: SILKGILGCGHCLVDVGDFTSSI*SSFPKR
Trigger: CCTCTTTGGGAATGATGACAAAATGCTGCTGGTGAA...GTCACCGACGTCGACAAGGCAGTGGCCGCAGCCAAGGATGCCTTTGAGAATGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR TCA 72 bp CATCGTCCCCTCGCAGCTTCCTCACTAACAGCTGGATaGAGTCCCCAAAGGTGGATGCCATGTACACATCTT +
Preference number: 3 (lower is better)
Translates to: HRPLAASSLTAG*SPQRWMPCTHL
Trigger: AAGATGTGTACATGGCATCCACCTTTGGGGACTTCATCCAGCTGTTAGTGAGGAAGCTGCGAGGGGACGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR-3UTR CAA 90 bp GGTTGCCCACCTTCATCTTCCGCACCTCTTCTACCACTCTCCGCACGAACTCATACGTTAACCACACCTTaGGGAATGCCGGCCTTTAAT +
Preference number: 3 (lower is better)
Translates to: GCPPSSSAPLLPLSARTHTLTTP*GMPAFN
Trigger: ATTAAAGGCCGGCATTCCCAAAGGTGTGGTTAACGT...ATGAGTTCGTGCGGAGAGTGGTAGAAGAGGTGCGGAAGATGAAGGTGGGCAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR-3UTR CAA 90 bp TCTCCGCACGAACTCATCATGAATGGAGTCCTCCACAAAGAGTCGGCCTGCTGCACGTTAACCACACCTTaGGGAATGCCGGCCTTTAAT +
Preference number: 3 (lower is better)
Translates to: SPHELIMNGVLHKESACCTLTTP*GMPAFN
Trigger: ATTAAAGGCCGGCATTCCCAAAGGTGTGGTTAACGT...GCAGCAGGCCGACTCTTTGTGGAGGACTCCATTCATGATGAGTTCGTGCGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR-3UTR CAA 90 bp ACAAACACAGTGCCTGCCTGGAGCTTGTCACTGACATACAGGGCCTTGTTGATGCTGACATACAGGGCCTaGTTGATGTCCCTGGTGAAG +
Preference number: 3 (lower is better)
Translates to: TNTVPAWSLSLTYRALLMLTYRA*LMSLVK
Trigger: CTTCACCAGGGACATCAACAAGGCCCTGTATGTCAG...CATCAACAAGGCCCTGTATGTCAGTGACAAGCTCCAGGCAGGCACTGTGTTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR-3UTR CAA 90 bp CTGATGGTGGCAGTGGCTGGCAGGTACATGTTGGGCTCCCACCTGTACATCAGCGTGTTCAGCGTTGAGTaGAAAAATGTCAGTTTCTGT +
Preference number: 3 (lower is better)
Translates to: LMVAVAGRYMLGSHLYISVFSVE*KNVSFC
Trigger: ACAGAAACTGACATTTTTCAACTCAACGCTGAACAC...GCTGATGTACAGGTGGGAGCCCAACATGTACCTGCCAGCCACTGCCACCATCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR-3UTR CAA 90 bp CTTCCTGTGAGGCCTGAGTCCAAGGACAGGAGCATGGGTGGCTTTGAGCAGGCAGTGTTCAGCGTTGAGTaGAAAAATGTCAGTTTCTGT +
Preference number: 3 (lower is better)
Translates to: LPVRPESKDRSMGGFEQAVFSVE*KNVSFC
Trigger: ACAGAAACTGACATTTTTCAACTCAACGCTGAACAC...TGCCTGCTCAAAGCCACCCATGCTCCTGTCCTTGGACTCAGGCCTCACAGGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493803.5
3UTR TCA 72 bp CAAAGACCTTTCTTCAGTATTCGAAGGTCACTGTCTTaGCCCGCAGGTACTCGTTCAGAGCCGCCTCTCCTA +
Preference number: 3 (lower is better)
Translates to: QRPFFSIRRSLS*PAGTRSEPPLL
Trigger: TAGGAGAGGCGGCTCTGAACGAGTACCTGCGGGTCAAGACAGTGACCTTCGAATACTGAAGAAAGGTCTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR TCA 72 bp TTCTTTGTATTCAGTTCTCTGTTAGAGCCTCTGGTGTaGTGTTTGGGCCCTGACTGGACTGGCTCTCCTCTC +
Preference number: 3 (lower is better)
Translates to: FFVFSSLLEPLV*CLGPDWTGSPL
Trigger: GAGAGGAGAGCCAGTCCAGTCAGGGCCCAAACATCACACCAGAGGCTCTAACAGAGAACTGAATACAAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000511283.2
3UTR-3UTR CAA 90 bp CTCCTTGGCTATGAACATGTGGTCTTCCACGTCTGTGAAAACAGTTGGCTCAAACCGAAGGACTCCTCCTaGGCTATGAACATGTGGTCT +
Preference number: 3 (lower is better)
Translates to: LLGYEHVVFHVCENSWLKPKDSS*AMNMWS
Trigger: AGACCACATGTTCATAGCCAAGGAGGAGTCCTTCGG...TTTGAGCCAACTGTTTTCACAGACGTGGAAGACCACATGTTCATAGCCAAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR-3UTR CAA 90 bp GCAGGGACTTTCTTCTCACAAAGACCTTTCTTCAGTATTCGAAGGTCACTGTCTATGCAATTCTCTCCTTaGTTGAAGAAAACAGAACTC +
Preference number: 3 (lower is better)
Translates to: AGTFFSQRPFFSIRRSLSMQFSP*LKKTEL
Trigger: GAGTTCTGTTTTCTTCAACAAAGGAGAGAATTGCAT...AGACAGTGACCTTCGAATACTGAAGAAAGGTCTTTGTGAGAAGAAAGTCCCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp GGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGACCGCGCGCAGGAGTTaGTGCGGGCGTCCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: GGRCCAPRLKREGAPATRTARRS*CGRPGQ
Trigger: CTGCCCGGGACGCCCGCACCAACTCCTGCGCGCGGT...CCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
CDS-3UTR GCA 90 bp GTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGGGCCGAGGCCCCTCGGTaGCTAGGGAGCAGTGACGGG +
Preference number: 4 (lower is better)
Translates to: VGGAVHPGSRGRGPQPRGAEAPR*LGSSDG
Trigger: CCCGTCACTGCTCCCTAGGCACCGAGGGGCCTCGGC...CCCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGGCCCGGTCCCGCGCACTaGTCTTCCCCCACCGTCCAT +
Preference number: 4 (lower is better)
Translates to: VGGAVHPGSRGRGPQPRGPGPAH*SSPTVH
Trigger: ATGGACGGTGGGGGAAGATCAGTGCGCGGGACCGGG...CCCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGCCCGGTCCCGCGCACTaGTCTTCCCCCACCGTCCAT +
Preference number: 4 (lower is better)
Translates to: GGRCCAPRLKREGAPATRPGPAH*SSPTVH
Trigger: ATGGACGGTGGGGGAAGATCAGTGCGCGGGACCGGG...CCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGCCGCGGATCCAGTTGTaGATGGCCTCTGCCGGCTGG +
Preference number: 4 (lower is better)
Translates to: GGRCCAPRLKREGAPATRPRIQL*MASAGW
Trigger: CCAGCCGGCAGAGGCCATTCACAACTGGATCCGCGG...CCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGGAGAAGGGCAGGACGTTaGGCTCGGCCCCCAAAGCCT +
Preference number: 4 (lower is better)
Translates to: VGGAVHPGSRGRGPQPRGRRAGR*ARPPKP
Trigger: AGGCTTTGGGGGCCGAGCTCAACGTCCTGCCCTTCT...CCCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGAGAAGGGCAGGACGTTaGGCTCGGCCCCCAAAGCCT +
Preference number: 4 (lower is better)
Translates to: GGRCCAPRLKREGAPATRRRAGR*ARPPKP
Trigger: AGGCTTTGGGGGCCGAGCTCAACGTCCTGCCCTTCT...CCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGGCCAAGGGCTGCTTCTaGCTGGACAGAGGGCGTCCA +
Preference number: 4 (lower is better)
Translates to: GGRCCAPRLKREGAPATRAKGCF*LDRGRP
Trigger: TGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGC...CCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp AGGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGCTTCTGCCCGCCCAGTaGCTACCCGCCTCTCCGAGA +
Preference number: 4 (lower is better)
Translates to: RWEVLCTQAQEGGGPSHELLPAQ*LPASPR
Trigger: TCTCGGAGAGGCGGGTAGGCACTGGGCGGGCAGAAG...CTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273450.7
CDS-3UTR GCA 90 bp GTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGGCTTGGCTGCGGCCACTaGCTTGTCGACGTCGGTGAC +
Preference number: 4 (lower is better)
Translates to: VGGAVHPGSRGRGPQPRGLGCGH*LVDVGD
Trigger: GTCACCGACGTCGACAAGGCAGTGGCCGCAGCCAAG...CCCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp AGGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGCCCCCAGGTGGGAGGTaGTGTGCACCCAGGCTCAAG +
Preference number: 4 (lower is better)
Translates to: RWEVLCTQAQEGGGPSHEPPGGR*CAPRLK
Trigger: CTTGAGCCTGGGTGCACAGCACCTCCCACCTGGGGG...CTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGCAGGCTGAGGGAGTCTaGGGGCTTTGCCCTCAGCGA +
Preference number: 4 (lower is better)
Translates to: GGRCCAPRLKREGAPATRQAEGV*GLCPQR
Trigger: TCGCTGAGGGCAAAGCCCCCAGACTCCCTCAGCCTG...CCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGGTGGCCGATGGGCTCCTaGGATGGGCAAAGCGTCTCC +
Preference number: 4 (lower is better)
Translates to: VGGAVHPGSRGRGPQPRGWPMGS*DGQSVS
Trigger: GGAGACGCTTTGCCCATCCCAGGAGCCCATCGGCCA...CCCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGTGGCCGATGGGCTCCTaGGATGGGCAAAGCGTCTCC +
Preference number: 4 (lower is better)
Translates to: GGRCCAPRLKREGAPATRWPMGS*DGQSVS
Trigger: GGAGACGCTTTGCCCATCCCAGGAGCCCATCGGCCA...CCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGACCACCCCTGGCCGATaGGCTCCTGGGATGGGCAAA +
Preference number: 4 (lower is better)
Translates to: GGRCCAPRLKREGAPATRTTPGR*APGMGK
Trigger: TTTGCCCATCCCAGGAGCCCATCGGCCAGGGGTGGT...CCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp TCCCGGCACCTTGTCGTTCCCGCGGATCCAGTTGTGAATGGCCTCTGCCGGCTGACCGCGCGCAGGAGTTaGTGCGGGCGTCCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: SRHLVVPADPVVNGLCRLTARRS*CGRPGQ
Trigger: CTGCCCGGGACGCCCGCACCAACTCCTGCGCGCGGT...CAGCCGGCAGAGGCCATTCACAACTGGATCCGCGGGAACGACAAGGTGCCGGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000493803.5
CDS-3UTR CCA 90 bp GGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGCCAGGAGCCACGTTGTaGGGTCTGCTATCCGGCCTC +
Preference number: 4 (lower is better)
Translates to: GGRCCAPRLKREGAPATRPGATL*GLLSGL
Trigger: GAGGCCGGATAGCAGACCCCACAACGTGGCTCCTGG...CCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472186.5
CDS-3UTR TCA 90 bp GGCTGCGGCCACTGCCTTGTCGACGTCGGTGACTTGGGCCAGGGATACCTGGCACCCGGTCCCGCGCACTaGTCTTCCCCCACCGTCCAT +
Preference number: 4 (lower is better)
Translates to: GCGHCLVDVGDLGQGYLAPGPAH*SSPTVH
Trigger: ATGGACGGTGGGGGAAGATCAGTGCGCGGGACCGGG...TGCCAGGTATCCCTGGCCCAAGTCACCGACGTCGACAAGGCAGTGGCCGCAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR GCA 90 bp GGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGAGCGGTTGTACAGCGTaGTCACGGTGTCGTCCGGGA +
Preference number: 4 (lower is better)
Translates to: GGRCCAPRLKREGAPATRSGCTA*SRCRPG
Trigger: TCCCGGACGACACCGTGAGCACGCTGTACAACCGCT...CCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp GGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGTTGGGGAGGATCCGCTaGCAAACACTCCGCACAGCC +
Preference number: 4 (lower is better)
Translates to: GGRCCAPRLKREGAPATRLGRIR*QTLRTA
Trigger: GGCTGTGCGGAGTGTTTGGCAGCGGATCCTCCCCAA...CCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp GTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGGTTGGGGAGGATCCGCTaGCAAACACTCCGCACAGCC +
Preference number: 4 (lower is better)
Translates to: VGGAVHPGSRGRGPQPRGLGRIR*QTLRTA
Trigger: GGCTGTGCGGAGTGTTTGGCAGCGGATCCTCCCCAA...CCCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGGCCAATGAAGAGCTGGTaGGGCATGCGGACAGTGCGC +
Preference number: 4 (lower is better)
Translates to: VGGAVHPGSRGRGPQPRGPMKSW*GMRTVR
Trigger: GCGCACTGTCCGCATGCCCCACCAGCTCTTCATTGG...CCCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGTGGTCTCAGAGGTCTTaGCGCCCTCGGCATCCACGA +
Preference number: 4 (lower is better)
Translates to: GGRCCAPRLKREGAPATRWSQRS*RPRHPR
Trigger: TCGTGGATGCCGAGGGCGCCAAGACCTCTGAGACCA...CCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGTCGACGTCGGTGACTTaGGCCAGGGATACCTGGCAG +
Preference number: 4 (lower is better)
Translates to: GGRCCAPRLKREGAPATRSTSVT*ARDTWQ
Trigger: CTGCCAGGTATCCCTGGCCCAAGTCACCGACGTCGA...CCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGCATCCAGGGCCTCAATaGTGGCCAGCTCCTCCTGGT +
Preference number: 4 (lower is better)
Translates to: GGRCCAPRLKREGAPATRHPGPQ*WPAPPG
Trigger: ACCAGGAGGAGCTGGCCACCATTGAGGCCCTGGATG...CCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGCGGTTGGGTCTGGCCTaGTTGATGGGGATGGTGGAG +
Preference number: 4 (lower is better)
Translates to: GGRCCAPRLKREGAPATRRLGLA*LMGMVE
Trigger: CTCCACCATCCCCATCAACCAGGCCAGACCCAACCG...CCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGGCCACCGGGAGTACTTaGATACCGGCACTCCATCCT +
Preference number: 4 (lower is better)
Translates to: GGRCCAPRLKREGAPATRATGST*IPALHP
Trigger: AGGATGGAGTGCCGGTATTCAAGTACTCCCGGTGGC...CCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGGTGAGTGGGGTCACCTaGGCAGGCTTGATCACCACT +
Preference number: 4 (lower is better)
Translates to: GGRCCAPRLKREGAPATRVSGVT*AGLITT
Trigger: AGTGGTGATCAAGCCTGCTCAGGTGACCCCACTCAC...CCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp TTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGACTGGAGTGCCCGCGGGGCCTaGGCTCTCGATAGCGGGGCC +
Preference number: 4 (lower is better)
Translates to: LFSLGGAHLTQPRAASDWSARGA*ALDSGA
Trigger: GGCCCCGCTATCGAGAGCTCAGGCCCCGCGGGCACT...CCAGTCAGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000472186.5
CDS-3UTR GCA 90 bp GTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGGACCTCACACTCCTTCTaGAGCAGCAGGTCTCCGGTG +
Preference number: 4 (lower is better)
Translates to: VGGAVHPGSRGRGPQPRGTSHSF*SSRSPV
Trigger: CACCGGAGACCTGCTGCTGCAGAAGGAGTGTGAGGT...CCCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp AGGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGGAGTCTGGGGGCTTTaGCCTCAGCGATCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: RWEVLCTQAQEGGGPSHEGVWGL*PQRSAS
Trigger: TGAGGCTGATCGCTGAGGGCAAAGCCCCCAGACTCC...CTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp AGGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGTTGGGGAGGATCCGCTaGCAAACACTCCGCACAGCC +
Preference number: 4 (lower is better)
Translates to: RWEVLCTQAQEGGGPSHELGRIR*QTLRTA
Trigger: GGCTGTGCGGAGTGTTTGGCAGCGGATCCTCCCCAA...CTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp GGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGAGGTCTGGATGGACATaGCCACGTGGGTCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: GGRCCAPRLKREGAPATRRSGWT*PRGSSG
Trigger: CCCTGAAGACCCACGTGGGCATGTCCATCCAGACCT...CCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000472186.5
CDS-3UTR GCA 90 bp CCCAAAGAGGATGAGTCCTGCTTTGGTGACCACCCCTGGCCGATGGGCTCCTGGGCGCGCAGGAGTTGGTaGGGGCGTCCCGGGCAGGTT +
Preference number: 4 (lower is better)
Translates to: PKEDESCFGDHPWPMGSWARRSW*GRPGQV
Trigger: AACCTGCCCGGGACGCCCGCACCAACTCCTGCGCGC...CCAGGAGCCCATCGGCCAGGGGTGGTCACCAAAGCAGGACTCATCCTCTTTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000493803.5
CDS-3UTR CCA 90 bp GTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGGAGCGGAAGGTCTGGATaGACATGCCCACGTGGGTCT +
Preference number: 4 (lower is better)
Translates to: VGGAVHPGSRGRGPQPRGSGRSG*TCPRGS
Trigger: AGACCCACGTGGGCATGTCCATCCAGACCTTCCGCT...CCCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGGGGGATGGTGGAGCCCTaGATCTTGTCACACCAGCCA +
Preference number: 4 (lower is better)
Translates to: VGGAVHPGSRGRGPQPRGGMVEP*ILSHQP
Trigger: TGGCTGGTGTGACAAGATCCAGGGCTCCACCATCCC...CCCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCAC
67% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGCAGGGAGCCAGATCCTaGGAGGACGTTAACCACACC +
Preference number: 4 (lower is better)
Translates to: GGRCCAPRLKREGAPATRQGARS*EDVNHT
Trigger: GGTGTGGTTAACGTCCTCCCAGGATCTGGCTCCCTG...CCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGGCAGGGAGCCAGATCCTaGGAGGACGTTAACCACACC +
Preference number: 4 (lower is better)
Translates to: VGGAVHPGSRGRGPQPRGQGARS*EDVNHT
Trigger: GGTGTGGTTAACGTCCTCCCAGGATCTGGCTCCCTG...CCCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp CTGAGGGAGTCTGGGGGCTTTGCCCTCAGCGATCAGCCTCACGGCCTGCACCATGGTGCAGACCCGTCCTaGGAGCCAGGAGGTGGGACC +
Preference number: 4 (lower is better)
Translates to: LRESGGFALSDQPHGLHHGADPS*EPGGGT
Trigger: GGTCCCACCTCCTGGCTCCCAGGACGGGTCTGCACC...ATGGTGCAGGCCGTGAGGCTGATCGCTGAGGGCAAAGCCCCCAGACTCCCTCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493803.5
CDS-3UTR CCA 90 bp CAGGATGGTCTGAGAGTCTCTGGCCGACCAGGGAGCCAGATCCTGGGAGGACGTGGCGGCGCTCACCGGTaGTGGGACTATGGCGGGAGC +
Preference number: 4 (lower is better)
Translates to: QDGLRVSGRPGSQILGGRGGAHR*WDYGGS
Trigger: GCTCCCGCCATAGTCCCACCACCGGTGAGCGCCGCC...ACGTCCTCCCAGGATCTGGCTCCCTGGTCGGCCAGAGACTCTCAGACCATCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455064.6
CDS-3UTR TCA 90 bp AGGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGCCACCGGGAGTACTTaGATACCGGCACTCCATCCT +
Preference number: 4 (lower is better)
Translates to: RWEVLCTQAQEGGGPSHEATGST*IPALHP
Trigger: AGGATGGAGTGCCGGTATTCAAGTACTCCCGGTGGC...CTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp CCGAGGGACCTGATTCCCGCCGCAGACCAGTGTGGCCCCTTCCTTCACGCCATGAGAAGGGCAGGACGTTaGGCTCGGCCCCCAAAGCCT +
Preference number: 4 (lower is better)
Translates to: PRDLIPAADQCGPFLHAMRRAGR*ARPPKP
Trigger: AGGCTTTGGGGGCCGAGCTCAACGTCCTGCCCTTCT...CATGGCGTGAAGGAAGGGGCCACACTGGTCTGCGGCGGGAATCAGGTCCCTCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR TCA 90 bp GTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGGGTGCCTAGGGAGCAGTaGCGGGTGATAGATGATGGA +
Preference number: 4 (lower is better)
Translates to: VGGAVHPGSRGRGPQPRGVPREQ*RVIDDG
Trigger: TCCATCATCTATCACCCGTCACTGCTCCCTAGGCAC...CCCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGAAAGATGATGAGGGGTaGCTTCCCGCCCAGTTCCAG +
Preference number: 4 (lower is better)
Translates to: GGRCCAPRLKREGAPATRKDDEG*LPAQFQ
Trigger: CTGGAACTGGGCGGGAAGTCACCCCTCATCATCTTT...CCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGCGAAGGTCACTGTCTTaGCCCGCAGGTACTCGTTCA +
Preference number: 4 (lower is better)
Translates to: GGRCCAPRLKREGAPATRRRSLS*PAGTRS
Trigger: TGAACGAGTACCTGCGGGTCAAGACAGTGACCTTCG...CCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp AGGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGCAGGTTAGACTTCTGTaGGCCGCAGCCCCGAAACTG +
Preference number: 4 (lower is better)
Translates to: RWEVLCTQAQEGGGPSHEQVRLL*AAAPKL
Trigger: CAGTTTCGGGGCTGCGGCTCACAGAAGTCTAACCTG...CTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
CDS-3UTR GCA 90 bp AGGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGAGCGAAAGGAGACGCTaGCCTCCGGGAATTTGCAGC +
Preference number: 4 (lower is better)
Translates to: RWEVLCTQAQEGGGPSHESERRR*PPGICS
Trigger: GCTGCAAATTCCCGGAGGGCAGCGTCTCCTTTCGCT...CTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273450.7
CDS-3UTR GCA 90 bp GGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGGTTGTGAATGGCCTCTaGCGGCTGGTCCCAGTTGAT +
Preference number: 4 (lower is better)
Translates to: GGRCCAPRLKREGAPATRVVNGL*RLVPVD
Trigger: ATCAACTGGGACCAGCCGGCAGAGGCCATTCACAAC...CCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp GGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGCGCAGTAACCAGCTCTaGCTCTGTCAGCTCAAGGAC +
Preference number: 4 (lower is better)
Translates to: GGRCCAPRLKREGAPATRRSNQL*LCQLKD
Trigger: GTCCTTGAGCTGACAGAGGCAGAGCTGGTTACTGCG...CCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp GTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGGGGGGCATGCGGACAGTaGGCTTGTTCACTGCCATTT +
Preference number: 4 (lower is better)
Translates to: VGGAVHPGSRGRGPQPRGGACGQ*ACSLPF
Trigger: AAATGGCAGTGAACAAGCGCACTGTCCGCATGCCCC...CCCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCAC
66% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp GGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCGCGCGCAGGAGTTGGTaGGGGCGTCCCGGGCAGGTT +
Preference number: 4 (lower is better)
Translates to: GLLLTGQRASKMQTWCAGARRSW*GRPGQV
Trigger: AACCTGCCCGGGACGCCCGCACCAACTCCTGCGCGC...GCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
CDS-3UTR CCA 90 bp GGGAGTCTGGGGGCTTTGCCCTCAGCGATCAGCCTCACGGCCTGCACCATCCCTACCACCCCTGGCCGATaGGCTCCTGGGATGGGCAAA +
Preference number: 4 (lower is better)
Translates to: GSLGALPSAISLTACTIPTTPGR*APGMGK
Trigger: TTTGCCCATCCCAGGAGCCCATCGGCCAGGGGTGGT...AGGGATGGTGCAGGCCGTGAGGCTGATCGCTGAGGGCAAAGCCCCCAGACTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000493803.5
CDS-3UTR CCA 90 bp GGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGCAACCTCCAGGACTTTaGGGAGGATCCGCTGCCAAA +
Preference number: 4 (lower is better)
Translates to: GGRCCAPRLKREGAPATRQPPGL*GGSAAK
Trigger: TTTGGCAGCGGATCCTCCCCAAAGTCCTGGAGGTTG...CCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GGCAGGTACATGTTGGGCTCCCACCTGTACATCAGCCGGCCCCGGTCCCGCGCATGGTCTCAGAGGTCTTaGCGCCCTCGGCATCCACGA +
Preference number: 4 (lower is better)
Translates to: GRYMLGSHLYISRPRSRAWSQRS*RPRHPR
Trigger: TCGTGGATGCCGAGGGCGCCAAGACCTCTGAGACCA...TGCGCGGGACCGGGGCCGGCTGATGTACAGGTGGGAGCCCAACATGTACCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR CCA 90 bp GTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGGTGGGCCAGGGATACCTaGCAGATGACACTTCCATCG +
Preference number: 4 (lower is better)
Translates to: VGGAVHPGSRGRGPQPRGWARDT*QMTLPS
Trigger: CGATGGAAGTGTCATCTGCCAGGTATCCCTGGCCCA...CCCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp AGGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGAGCGGAAGGTCTGGATaGACATGCCCACGTGGGTCT +
Preference number: 4 (lower is better)
Translates to: RWEVLCTQAQEGGGPSHESGRSG*TCPRGS
Trigger: AGACCCACGTGGGCATGTCCATCCAGACCTTCCGCT...CTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000472186.5
CDS-3UTR CCA 90 bp AGGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGCAGGGAGCCAGATCCTaGGAGGACGTTAACCACACC +
Preference number: 4 (lower is better)
Translates to: RWEVLCTQAQEGGGPSHEQGARS*EDVNHT
Trigger: GGTGTGGTTAACGTCCTCCCAGGATCTGGCTCCCTG...CTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGCAAATTCCGTGGCATTaGCCCGAGACAGCACGGCAT +
Preference number: 4 (lower is better)
Translates to: GGRCCAPRLKREGAPATRQIPWH*PETARH
Trigger: ATGCCGTGCTGTCTCGGGCCAATGCCACGGAATTTG...CCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGTCCAAGATGCAGACATaGTGTGCAGGCAGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: GGRCCAPRLKREGAPATRSKMQT*CAGRRA
Trigger: AGCCCTCCTGCCTGCACACCATGTCTGCATCTTGGA...CCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGAGGGCTGCTTCTGACTaGACAGAGGGCGTCCAAGAT +
Preference number: 4 (lower is better)
Translates to: GGRCCAPRLKREGAPATRRAASD*TEGVQD
Trigger: ATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCT...CCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGGAGGGCTGCTTCTGACTaGACAGAGGGCGTCCAAGAT +
Preference number: 4 (lower is better)
Translates to: VGGAVHPGSRGRGPQPRGRAASD*TEGVQD
Trigger: ATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCT...CCCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTACCGCGCGCAGGAGTTaGTGCGGGCGTCCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: EALFSLGGAHLTQPRAASTARRS*CGRPGQ
Trigger: CTGCCCGGGACGCCCGCACCAACTCCTGCGCGCGGT...AGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
CDS-3UTR TCA 90 bp GGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGCCTTGTCTGGAACAGTaGACACACCCACCACTTCGT +
Preference number: 4 (lower is better)
Translates to: GGRCCAPRLKREGAPATRPCLEQ*THPPLR
Trigger: ACGAAGTGGTGGGTGTGTTCACTGTTCCAGACAAGG...CCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp ATCCTTGGCTGCGGCCACTGCCTTGTCGACGTCGGTGACTTGGGCCAGGGATACCCGCGGATCCAGTTGTaGATGGCCTCTGCCGGCTGG +
Preference number: 4 (lower is better)
Translates to: ILGCGHCLVDVGDLGQGYPRIQL*MASAGW
Trigger: CCAGCCGGCAGAGGCCATTCACAACTGGATCCGCGG...GTATCCCTGGCCCAAGTCACCGACGTCGACAAGGCAGTGGCCGCAGCCAAGGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR TCA 90 bp GGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGACGCGGCCCCTGACTTaGAGAAATCAGTGGAGTCTT +
Preference number: 4 (lower is better)
Translates to: GGRCCAPRLKREGAPATRTRPLT*RNQWSL
Trigger: AAGACTCCACTGATTTCTTCAAGTCAGGGGCCGCGT...CCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp TTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGACTGGCCCGGTCCCGCGCACTaGTCTTCCCCCACCGTCCAT +
Preference number: 4 (lower is better)
Translates to: LFSLGGAHLTQPRAASDWPGPAH*SSPTVH
Trigger: ATGGACGGTGGGGGAAGATCAGTGCGCGGGACCGGG...CCAGTCAGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGCCTCTGTGGAGCCTGTaGACCCGATTTTCCTCACAT +
Preference number: 4 (lower is better)
Translates to: GGRCCAPRLKREGAPATRPLWSL*TRFSSH
Trigger: ATGTGAGGAAAATCGGGTTCACAGGCTCCACAGAGG...CCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCCCTGGCCGAGGGACCTaGTTCCCGCCGCAGACCAGT +
Preference number: 4 (lower is better)
Translates to: GLLLTGQRASKMQTWCAGPGRGT*FPPQTS
Trigger: ACTGGTCTGCGGCGGGAATCAGGTCCCTCGGCCAGG...GCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp AGGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGCGAAGGTCACTGTCTTaGCCCGCAGGTACTCGTTCA +
Preference number: 4 (lower is better)
Translates to: RWEVLCTQAQEGGGPSHERRSLS*PAGTRS
Trigger: TGAACGAGTACCTGCGGGTCAAGACAGTGACCTTCG...CTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp TCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTGCCGAGGCCCCTCGGTaGCTAGGGAGCAGTGACGGG +
Preference number: 4 (lower is better)
Translates to: SEALFSLGGAHLTQPRAAAEAPR*LGSSDG
Trigger: CCCGTCACTGCTCCCTAGGCACCGAGGGGCCTCGGC...AGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp GAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGCCGAGGCCCCTCGGTaGCTAGGGAGCAGTGACGGG +
Preference number: 4 (lower is better)
Translates to: EALFSLGGAHLTQPRAASAEAPR*LGSSDG
Trigger: CCCGTCACTGCTCCCTAGGCACCGAGGGGCCTCGGC...AGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp CTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGGGCCGAGGCCCCTCGGTaGCTAGGGAGCAGTGACGGG +
Preference number: 4 (lower is better)
Translates to: LLLTGQRASKMQTWCAGRAEAPR*LGSSDG
Trigger: CCCGTCACTGCTCCCTAGGCACCGAGGGGCCTCGGC...CCTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp AGGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGCGCAGTAACCAGCTCTaGCTCTGTCAGCTCAAGGAC +
Preference number: 4 (lower is better)
Translates to: RWEVLCTQAQEGGGPSHERSNQL*LCQLKD
Trigger: GTCCTTGAGCTGACAGAGGCAGAGCTGGTTACTGCG...CTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp AGGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGGGGCATGCGGACAGTaGGCTTGTTCACTGCCATTT +
Preference number: 4 (lower is better)
Translates to: RWEVLCTQAQEGGGPSHEGACGQ*ACSLPF
Trigger: AAATGGCAGTGAACAAGCGCACTGTCCGCATGCCCC...CTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp GTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGGCTGCTCCATGAGATCTaGCAACCTGTACATCAGCCG +
Preference number: 4 (lower is better)
Translates to: VGGAVHPGSRGRGPQPRGLLHEI*QPVHQP
Trigger: CGGCTGATGTACAGGTTGGCAGATCTCATGGAGCAG...CCCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000472186.5
CDS-3UTR GCA 90 bp GGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGGACAAACACAGTGCCTaGCTGGAGCTTGTCACTGAC +
Preference number: 4 (lower is better)
Translates to: GGRCCAPRLKREGAPATRDKHSA*LELVTD
Trigger: GTCAGTGACAAGCTCCAGGCAGGCACTGTGTTTGTC...CCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp TTCCCAAAGAGGATGAGTCCTGCTTTGGTGACCACCCCTGGCCGATGGGCTCCTGCGCGCAGGAGTTGGTaGGGGCGTCCCGGGCAGGTT +
Preference number: 4 (lower is better)
Translates to: FPKRMSPALVTTPGRWAPARRSW*GRPGQV
Trigger: AACCTGCCCGGGACGCCCGCACCAACTCCTGCGCGC...AGGAGCCCATCGGCCAGGGGTGGTCACCAAAGCAGGACTCATCCTCTTTGGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000493803.5
CDS-3UTR CCA 90 bp AGGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGTCTCAAAGGCATCCTTaGCTGCGGCCACTGCCTTGT +
Preference number: 4 (lower is better)
Translates to: RWEVLCTQAQEGGGPSHESQRHP*LRPLPC
Trigger: ACAAGGCAGTGGCCGCAGCCAAGGATGCCTTTGAGA...CTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp AGGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGAAGCTTTATTCTCCCTaGGAGGGGCACACCTCACCC +
Preference number: 4 (lower is better)
Translates to: RWEVLCTQAQEGGGPSHEKLYSP*EGHTSP
Trigger: GGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTT...CTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp TTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGACTGGGGTGCAGACCCGTCCTaGGAGCCAGGAGGTGGGACC +
Preference number: 4 (lower is better)
Translates to: LFSLGGAHLTQPRAASDWGADPS*EPGGGT
Trigger: GGTCCCACCTCCTGGCTCCCAGGACGGGTCTGCACC...CCAGTCAGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
CDS-3UTR CCA 90 bp CGCAGACCAGTGTGGCCCCTTCCTTCACGCCATGCTGGCAGTACTCCATCAGCTGGTGCAGACCCGTCCTaGGAGCCAGGAGGTGGGACC +
Preference number: 4 (lower is better)
Translates to: RRPVWPLPSRHAGSTPSAGADPS*EPGGGT
Trigger: GGTCCCACCTCCTGGCTCCCAGGACGGGTCTGCACC...AGCTGATGGAGTACTGCCAGCATGGCGTGAAGGAAGGGGCCACACTGGTCTGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455064.6
CDS-3UTR CCA 90 bp GCCACTGCCCAGAAGCTGATGGTGGCAGTGGCTGGCAGGTACATGTTGGGCTCCAGTGCTTTGTCTGCCTaGGAGGCCCAGCCTGCGCCC +
Preference number: 4 (lower is better)
Translates to: ATAQKLMVAVAGRYMLGSSALSA*EAQPAP
Trigger: GGGCGCAGGCTGGGCCTCCCAGGCAGACAAAGCACT...GGAGCCCAACATGTACCTGCCAGCCACTGCCACCATCAGCTTCTGGGCAGTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR CAA 72 bp CAGAAGCTGATGGTGGCAGTGGCTGGCAGGTACATGTaGGGCTCCCACCTGTACATCAGCCGGCCCCGGTCC +
Preference number: 4 (lower is better)
Translates to: QKLMVAVAGRYM*GSHLYISRPRS
Trigger: GGACCGGGGCCGGCTGATGTACAGGTGGGAGCCCAACATGTACCTGCCAGCCACTGCCACCATCAGCTTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR CAA 72 bp GCTTTGTCTGCCTGGGAGGCCCAGCCTGCGCCCACTTaGGAAGCATCCCTTGGCTTCCGCACCTCCTCACCT +
Preference number: 4 (lower is better)
Translates to: ALSAWEAQPAPT*EASLGFRTSSP
Trigger: AGGTGAGGAGGTGCGGAAGCCAAGGGATGCTTCCAAAGTGGGCGCAGGCTGGGCCTCCCAGGCAGACAAAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR TCA 90 bp CCCAAAGAGGATGAGTCCTGCTTTGGTGACCACCCCTGGCCGATGGGCTCCTGGAGAAGGGCAGGACGTTaGGCTCGGCCCCCAAAGCCT +
Preference number: 4 (lower is better)
Translates to: PKEDESCFGDHPWPMGSWRRAGR*ARPPKP
Trigger: AGGCTTTGGGGGCCGAGCTCAACGTCCTGCCCTTCT...CCAGGAGCCCATCGGCCAGGGGTGGTCACCAAAGCAGGACTCATCCTCTTTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR TCA 90 bp TTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGACTGGCCGCGGATCCAGTTGTaGATGGCCTCTGCCGGCTGG +
Preference number: 4 (lower is better)
Translates to: LFSLGGAHLTQPRAASDWPRIQL*MASAGW
Trigger: CCAGCCGGCAGAGGCCATTCACAACTGGATCCGCGG...CCAGTCAGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGGTTGCCATCCTCCAGCTaGATATTCTTCACCAGCAGC +
Preference number: 4 (lower is better)
Translates to: VGGAVHPGSRGRGPQPRGLPSSS*IFFTSS
Trigger: GCTGCTGGTGAAGAATATTCAGCTGGAGGATGGCAA...CCCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp AGGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGACGCGGCCCCTGACTTaGAGAAATCAGTGGAGTCTT +
Preference number: 4 (lower is better)
Translates to: RWEVLCTQAQEGGGPSHETRPLT*RNQWSL
Trigger: AAGACTCCACTGATTTCTTCAAGTCAGGGGCCGCGT...CTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGGTCACTAACAGCTGGATaGAGTCCCCAAAGGTGGATG +
Preference number: 4 (lower is better)
Translates to: VGGAVHPGSRGRGPQPRGSLTAG*SPQRWM
Trigger: CATCCACCTTTGGGGACTTCATCCAGCTGTTAGTGA...CCCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGCCCGGTCCCGCGCACTaGTCTTCCCCCACCGTCCAT +
Preference number: 4 (lower is better)
Translates to: AASDWTEGVQDADMVCRQPGPAH*SSPTVH
Trigger: ATGGACGGTGGGGGAAGATCAGTGCGCGGGACCGGG...CTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp TCCCTGGTGAAGACACCAGAAGCCAGGCCAAATTCCGTGGCATTGGCCCGAGACCCTGGCCGAGGGACCTaGTTCCCGCCGCAGACCAGT +
Preference number: 4 (lower is better)
Translates to: SLVKTPEARPNSVALARDPGRGT*FPPQTS
Trigger: ACTGGTCTGCGGCGGGAATCAGGTCCCTCGGCCAGG...GTCTCGGGCCAATGCCACGGAATTTGGCCTGGCTTCTGGTGTCTTCACCAGGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR TCA 90 bp GCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGCCTGGCCGAGGGACCTaGTTCCCGCCGCAGACCAGT +
Preference number: 4 (lower is better)
Translates to: AASDWTEGVQDADMVCRQPGRGT*FPPQTS
Trigger: ACTGGTCTGCGGCGGGAATCAGGTCCCTCGGCCAGG...CTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp TTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCCCTGGCCGAGGGACCTaGTTCCCGCCGCAGACCAGT +
Preference number: 4 (lower is better)
Translates to: FRSFILPGRGTPHPAKGCPGRGT*FPPQTS
Trigger: ACTGGTCTGCGGCGGGAATCAGGTCCCTCGGCCAGG...GCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp CAGCCAAGGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGCCTGGCCGAGGGACCTaGTTCCCGCCGCAGACCAGT +
Preference number: 4 (lower is better)
Translates to: QPRAASDWTEGVQDADMVPGRGT*FPPQTS
Trigger: ACTGGTCTGCGGCGGGAATCAGGTCCCTCGGCCAGG...CACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp CTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGGCCTGGCCGAGGGACCTaGTTCCCGCCGCAGACCAGT +
Preference number: 4 (lower is better)
Translates to: LLLTGQRASKMQTWCAGRPGRGT*FPPQTS
Trigger: ACTGGTCTGCGGCGGGAATCAGGTCCCTCGGCCAGG...CCTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTCCGCGGATCCAGTTGTaGATGGCCGAGGCCCCTCGG +
Preference number: 4 (lower is better)
Translates to: EALFSLGGAHLTQPRAASPRIQL*MAEAPR
Trigger: CCGAGGGGCCTCGGCCATTCACAACTGGATCCGCGG...AGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452905.6
CDS-3UTR TCA 90 bp GGGAGTCTGGGGGCTTTGCCCTCAGCGATCAGCCTCACGGCCTGCACCATCCCTCTGAGAAGCCTTTTCTaGGCCTCAGGCAAGGAGCCC +
Preference number: 4 (lower is better)
Translates to: GSLGALPSAISLTACTIPLRSLF*ASGKEP
Trigger: GGGCTCCTTGCCTGAGGCTCAGAAAAGGCTTCTCAG...AGGGATGGTGCAGGCCGTGAGGCTGATCGCTGAGGGCAAAGCCCCCAGACTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR GCA 90 bp GGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCCGGCCCCTTAGCAGCTaGGCATCCGGGTGGATAGCG +
Preference number: 4 (lower is better)
Translates to: GLLLTGQRASKMQTWCAGRPLSS*ASGWIA
Trigger: CGCTATCCACCCGGATGCGCAGCTGCTAAGGGGCCG...GCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273450.7
CDS-3UTR GCA 90 bp GCCCTTGCTGTCTTCTGCGTGCAGGAGCTAAGTCCCCTCCAGCCCAGGCTGGTGAGCGGTTGTACAGCGTaGTCACGGTGTCGTCCGGGA +
Preference number: 4 (lower is better)
Translates to: ALAVFCVQELSPLQPRLVSGCTA*SRCRPG
Trigger: TCCCGGACGACACCGTGAGCACGCTGTACAACCGCT...CACCAGCCTGGGCTGGAGGGGACTTAGCTCCTGCACGCAGAAGACAGCAAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR GCA 90 bp TCACAGGCCTCTGTCCAGGCTCCCGGCACCTTGTCGTTCCCGCGGATCCAGTTGGGAGTCTGGGGGCTTTaGCCTCAGCGATCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: SQASVQAPGTLSFPRIQLGVWGL*PQRSAS
Trigger: TGAGGCTGATCGCTGAGGGCAAAGCCCCCAGACTCC...CAACTGGATCCGCGGGAACGACAAGGTGCCGGGAGCCTGGACAGAGGCCTGTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000493803.5
CDS-3UTR GCA 90 bp AGGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGAAAGAGGATGAGTCCTaGTTTGGTGACCACCCCTGG +
Preference number: 4 (lower is better)
Translates to: RWEVLCTQAQEGGGPSHEKEDES*FGDHPW
Trigger: CCAGGGGTGGTCACCAAAGCAGGACTCATCCTCTTT...CTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp GTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGGAAGGACACTGCTGGCTaGCCCCTTAAAGAAGTTCGA +
Preference number: 4 (lower is better)
Translates to: VGGAVHPGSRGRGPQPRGKDTAG*PLKEVR
Trigger: TCGAACTTCTTTAAGGGGGCAGCCAGCAGTGTCCTT...CCCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp CCATCAGCTTCACAAGGTGGGCATGGTGATTCTGCGGCCCGTGGTCGGTGTCCCCTTGGCTGCGGCCACTaGCTTGTCGACGTCGGTGAC +
Preference number: 4 (lower is better)
Translates to: PSASQGGHGDSAARGRCPLGCGH*LVDVGD
Trigger: GTCACCGACGTCGACAAGGCAGTGGCCGCAGCCAAG...GGGACACCGACCACGGGCCGCAGAATCACCATGCCCACCTTGTGAAGCTGATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR GCA 90 bp AGGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGCTGCTCCATGAGATCTaGCAACCTGTACATCAGCCG +
Preference number: 4 (lower is better)
Translates to: RWEVLCTQAQEGGGPSHELLHEI*QPVHQP
Trigger: CGGCTGATGTACAGGTTGGCAGATCTCATGGAGCAG...CTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000472186.5
CDS-3UTR GCA 90 bp GTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGGCAGCTTTTCATGATGTaGTTGCCCACCTCTGTGGAG +
Preference number: 4 (lower is better)
Translates to: VGGAVHPGSRGRGPQPRGQLFMM*LPTSVE
Trigger: CTCCACAGAGGTGGGCAAGCACATCATGAAAAGCTG...CCCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp GGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGCACAAAGAGTCGGCCTaGTGCAATGCAATTCTCTCC +
Preference number: 4 (lower is better)
Translates to: GGRCCAPRLKREGAPATRHKESA*CNAILS
Trigger: GGAGAGAATTGCATTGCAGCAGGCCGACTCTTTGTG...CCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp GTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGGCACAAAGAGTCGGCCTaGTGCAATGCAATTCTCTCC +
Preference number: 4 (lower is better)
Translates to: VGGAVHPGSRGRGPQPRGHKESA*CNAILS
Trigger: GGAGAGAATTGCATTGCAGCAGGCCGACTCTTTGTG...CCCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp ACATCAGGATGGTCTGAGAGTCTCTGGCCGACCAGGGAGCCAGATCCTGGGAGGCCCCCAGGTGGGAGGTaGTGTGCACCCAGGCTCAAG +
Preference number: 4 (lower is better)
Translates to: TSGWSESLWPTREPDPGRPPGGR*CAPRLK
Trigger: CTTGAGCCTGGGTGCACAGCACCTCCCACCTGGGGG...CCTCCCAGGATCTGGCTCCCTGGTCGGCCAGAGACTCTCAGACCATCCTGATGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR GCA 90 bp TCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCGCGCAGGAGTTGGTaGGGGCGTCCCGGGCAGGTT +
Preference number: 4 (lower is better)
Translates to: SSEALFSLGGAHLTQPRAARRSW*GRPGQV
Trigger: AACCTGCCCGGGACGCCCGCACCAACTCCTGCGCGC...AGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
CDS-3UTR GCA 90 bp AGGGAGTCTGGGGGCTTTGCCCTCAGCGATCAGCCTCACGGCCTGCACCATCCCGCCCTTGCTGTCTTCTaGGTGCAGGAGCTAAGTCCC +
Preference number: 4 (lower is better)
Translates to: RESGGFALSDQPHGLHHPALAVF*VQELSP
Trigger: GGGACTTAGCTCCTGCACGCAGAAGACAGCAAGGGC...GGGATGGTGCAGGCCGTGAGGCTGATCGCTGAGGGCAAAGCCCCCAGACTCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR GCA 90 bp GGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCCCTCTCCTAGGCAAGTaGCCGCGGGGCCTGAGCTCT +
Preference number: 4 (lower is better)
Translates to: GLLLTGQRASKMQTWCAGPLLGK*PRGLSS
Trigger: AGAGCTCAGGCCCCGCGGGCACTTGCCTAGGAGAGG...GCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472186.5
CDS-3UTR CCA 90 bp TTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGACTGGAGCTGCGCATCCGGGTaGATAGCGGCGCTTCTGCCC +
Preference number: 4 (lower is better)
Translates to: LFSLGGAHLTQPRAASDWSCASG*IAALLP
Trigger: GGGCAGAAGCGCCGCTATCCACCCGGATGCGCAGCT...CCAGTCAGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273450.7
CDS-3UTR CCA 90 bp CAGTTTCTGTTCACAGGCCTCTGTCCAGGCTCCCGGCACCTTGTCGTTCCCGCGCAGGCTGAGGGAGTCTaGGGGCTTTGCCCTCAGCGA +
Preference number: 4 (lower is better)
Translates to: QFLFTGLCPGSRHLVVPAQAEGV*GLCPQR
Trigger: TCGCTGAGGGCAAAGCCCCCAGACTCCCTCAGCCTG...CGCGGGAACGACAAGGTGCCGGGAGCCTGGACAGAGGCCTGTGAACAGAAACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000493803.5
CDS-3UTR CCA 90 bp CCTGTACATCAGCCGGCCCCGGTCCCGCGCACTGATCTTCCCCCACCGTCCATTATGGCCTCTGCCGGCTaGTCCCAGTTGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: PVHQPAPVPRTDLPPPSIMASAG*SQLILA
Trigger: AGCCAAGATCAACTGGGACCAGCCGGCAGAGGCCAT...AATGGACGGTGGGGGAAGATCAGTGCGCGGGACCGGGGCCGGCTGATGTACAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR CCA 90 bp ATTCCCGCCGCAGACCAGTGTGGCCCCTTCCTTCACGCCATGCTGGCAGTACTCTGGCCGATGGGCTCCTaGGATGGGCAAAGCGTCTCC +
Preference number: 4 (lower is better)
Translates to: IPAADQCGPFLHAMLAVLWPMGS*DGQSVS
Trigger: GGAGACGCTTTGCCCATCCCAGGAGCCCATCGGCCA...GAGTACTGCCAGCATGGCGTGAAGGAAGGGGCCACACTGGTCTGCGGCGGGAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp GTTTCTGTTCACAGGCCTCTGTCCAGGCTCCCGGCACCTTGTCGTTCCCGCGGATGGCCGATGGGCTCCTaGGATGGGCAAAGCGTCTCC +
Preference number: 4 (lower is better)
Translates to: VSVHRPLSRLPAPCRSRGWPMGS*DGQSVS
Trigger: GGAGACGCTTTGCCCATCCCAGGAGCCCATCGGCCA...TCCGCGGGAACGACAAGGTGCCGGGAGCCTGGACAGAGGCCTGTGAACAGAAAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000493803.5
CDS-3UTR CCA 90 bp TCACAGGCCTCTGTCCAGGCTCCCGGCACCTTGTCGTTCCCGCGGATCCAGTTGTTTGGTGACCACCCCTaGCCGATGGGCTCCTGGGAT +
Preference number: 4 (lower is better)
Translates to: SQASVQAPGTLSFPRIQLFGDHP*PMGSWD
Trigger: ATCCCAGGAGCCCATCGGCCAGGGGTGGTCACCAAA...CAACTGGATCCGCGGGAACGACAAGGTGCCGGGAGCCTGGACAGAGGCCTGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000493803.5
CDS-3UTR CCA 90 bp ATTCCCGCCGCAGACCAGTGTGGCCCCTTCCTTCACGCCATGCTGGCAGTACTCCGCCGCAGACCAGTGTaGCCCCTTCCTTCACGCCAT +
Preference number: 4 (lower is better)
Translates to: IPAADQCGPFLHAMLAVLRRRPV*PLPSRH
Trigger: ATGGCGTGAAGGAAGGGGCCACACTGGTCTGCGGCG...GAGTACTGCCAGCATGGCGTGAAGGAAGGGGCCACACTGGTCTGCGGCGGGAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp GTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGGAACACAGTGCCTGCCTaGAGCTTGTCACTGACATAC +
Preference number: 4 (lower is better)
Translates to: VGGAVHPGSRGRGPQPRGNTVPA*SLSLTY
Trigger: GTATGTCAGTGACAAGCTCCAGGCAGGCACTGTGTT...CCCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGGTGCAGACCCGTCCTaGGAGCCAGGAGGTGGGACC +
Preference number: 4 (lower is better)
Translates to: EALFSLGGAHLTQPRAASGADPS*EPGGGT
Trigger: GGTCCCACCTCCTGGCTCCCAGGACGGGTCTGCACC...AGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
CDS-3UTR CCA 90 bp GGGGTGACTTCCCGCCCAGTTCCAGGGACACCTTCTTCACGTTACTTATGGCACCCGGTGGTGGGACTATaGCGGGAGCGCAGCGCACCC +
Preference number: 4 (lower is better)
Translates to: GVTSRPVPGTPSSRYLWHPVVGL*RERSAP
Trigger: GGGTGCGCTGCGCTCCCGCCATAGTCCCACCACCGG...GTGCCATAAGTAACGTGAAGAAGGTGTCCCTGGAACTGGGCGGGAAGTCACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455064.6
CDS-3UTR CCA 90 bp CTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGGGGCGCTCACCGGTGGTaGGACTATGGCGGGAGCGCA +
Preference number: 4 (lower is better)
Translates to: LLLTGQRASKMQTWCAGRGAHRW*DYGGSA
Trigger: TGCGCTCCCGCCATAGTCCCACCACCGGTGAGCGCC...CCTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455064.6
CDS-3UTR CCA 90 bp GTGGACGGTCTCTCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCGGAGAGTCAGCCGAGTaGGGGCGGCGCTCACCGGTG +
Preference number: 4 (lower is better)
Translates to: VDGLSSEALFSLGGAHLTGESAE*GRRSPV
Trigger: CACCGGTGAGCGCCGCCCCCACTCGGCTGACTCTCC...GGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGAGAGACCGTCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455064.6
CDS-3UTR TCA 90 bp CGCAGACCAGTGTGGCCCCTTCCTTCACGCCATGCTGGCAGTACTCCATCAGCTAGAAGGGCAGGACGTTaGGCTCGGCCCCCAAAGCCT +
Preference number: 4 (lower is better)
Translates to: RRPVWPLPSRHAGSTPSARRAGR*ARPPKP
Trigger: AGGCTTTGGGGGCCGAGCTCAACGTCCTGCCCTTCT...AGCTGATGGAGTACTGCCAGCATGGCGTGAAGGAAGGGGCCACACTGGTCTGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR TCA 90 bp GGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGCCTTTCTTATCTCCGTaGATGAGGGTCCAGTTGATG +
Preference number: 4 (lower is better)
Translates to: GGRCCAPRLKREGAPATRPFLSP*MRVQLM
Trigger: CATCAACTGGACCCTCATTCACGGAGATAAGAAAGG...CCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp CAGCCAAGGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGCCGCGGATCCAGTTGTaGATGGCCTCTGCCGGCTGG +
Preference number: 4 (lower is better)
Translates to: QPRAASDWTEGVQDADMVPRIQL*MASAGW
Trigger: CCAGCCGGCAGAGGCCATTCACAACTGGATCCGCGG...CACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp CTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGGCCGCGGATCCAGTTGTaGATGGCCTCTGCCGGCTGG +
Preference number: 4 (lower is better)
Translates to: LLLTGQRASKMQTWCAGRPRIQL*MASAGW
Trigger: CCAGCCGGCAGAGGCCATTCACAACTGGATCCGCGG...CCTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp AGGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGTCACTAACAGCTGGATaGAGTCCCCAAAGGTGGATG +
Preference number: 4 (lower is better)
Translates to: RWEVLCTQAQEGGGPSHESLTAG*SPQRWM
Trigger: CATCCACCTTTGGGGACTTCATCCAGCTGTTAGTGA...CTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp TTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGACTGGTGGGTCTGGCCTGGTTaGTGGGGATGGTGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: LFSLGGAHLTQPRAASDWWVWPG*WGWWSP
Trigger: AGGGCTCCACCATCCCCATCAACCAGGCCAGACCCA...CCAGTCAGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp TTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGACTGGACAAGGTGGGCATGGTaGTTCTGCGGCCCGTGGTCG +
Preference number: 4 (lower is better)
Translates to: LFSLGGAHLTQPRAASDWTRWAW*FCGPWS
Trigger: CGACCACGGGCCGCAGAATCACCATGCCCACCTTGT...CCAGTCAGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGGGGTCTTCCACGTCTGTaGAAACAGTTGGCTCAAAGA +
Preference number: 4 (lower is better)
Translates to: VGGAVHPGSRGRGPQPRGGLPRL*KQLAQR
Trigger: TCTTTGAGCCAACTGTTTTCACAGACGTGGAAGACC...CCCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGGTCTTGTTGTACGTGTTaGCAAACACAGTGCCTGCCT +
Preference number: 4 (lower is better)
Translates to: VGGAVHPGSRGRGPQPRGSCCTC*QTQCLP
Trigger: AGGCAGGCACTGTGTTTGTCAACACGTACAACAAGA...CCCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp TTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGACTGGGCCAAGGGCTGCTTCTaGCTGGACAGAGGGCGTCCA +
Preference number: 4 (lower is better)
Translates to: LFSLGGAHLTQPRAASDWAKGCF*LDRGRP
Trigger: TGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGC...CCAGTCAGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GCACCTTGTCGTTCCCGCGGATCCAGTTGTGAATGGCCTCTGCCGGCTGGTCCCGTGATGTTTGGGCCCTaGCTGGACTGGCTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: APCRSRGSSCEWPLPAGPVMFGP*LDWLSS
Trigger: AGAGGAGAGCCAGTCCAGTCAGGGCCCAAACATCAC...GGGACCAGCCGGCAGAGGCCATTCACAACTGGATCCGCGGGAACGACAAGGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR GCA 90 bp GGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCTGCCCTCCGGGAATTTaGAGCCGCTTGCAGAGGCGG +
Preference number: 4 (lower is better)
Translates to: GLLLTGQRASKMQTWCAGCPPGI*SRLQRR
Trigger: CCGCCTCTGCAAGCGGCTGCAAATTCCCGGAGGGCA...GCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273450.7
CDS-3UTR GCA 90 bp GTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGGGCTCTGTCCAATCACTaGAATCTTCATGGTAGCAGG +
Preference number: 4 (lower is better)
Translates to: VGGAVHPGSRGRGPQPRGALSNH*NLHGSR
Trigger: CCTGCTACCATGAAGATTGCAGTGATTGGACAGAGC...CCCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp TCACAGGCCTCTGTCCAGGCTCCCGGCACCTTGTCGTTCCCGCGGATCCAGTTGACCTCACACTCCTTCTaGAGCAGCAGGTCTCCGGTG +
Preference number: 4 (lower is better)
Translates to: SQASVQAPGTLSFPRIQLTSHSF*SSRSPV
Trigger: CACCGGAGACCTGCTGCTGCAGAAGGAGTGTGAGGT...CAACTGGATCCGCGGGAACGACAAGGTGCCGGGAGCCTGGACAGAGGCCTGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000493803.5
CDS-3UTR GCA 90 bp CAGTTTCTGTTCACAGGCCTCTGTCCAGGCTCCCGGCACCTTGTCGTTCCCGCGTTGGGGAGGATCCGCTaGCAAACACTCCGCACAGCC +
Preference number: 4 (lower is better)
Translates to: QFLFTGLCPGSRHLVVPALGRIR*QTLRTA
Trigger: GGCTGTGCGGAGTGTTTGGCAGCGGATCCTCCCCAA...CGCGGGAACGACAAGGTGCCGGGAGCCTGGACAGAGGCCTGTGAACAGAAACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR GCA 90 bp TTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGACTGGCTTGGCTGCGGCCACTaGCTTGTCGACGTCGGTGAC +
Preference number: 4 (lower is better)
Translates to: LFSLGGAHLTQPRAASDWLGCGH*LVDVGD
Trigger: GTCACCGACGTCGACAAGGCAGTGGCCGCAGCCAAG...CCAGTCAGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp AGGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGCCACACCTTTGGGAATaGCGGCCTTTAATGTCAGCT +
Preference number: 4 (lower is better)
Translates to: RWEVLCTQAQEGGGPSHEPHLWE*RPLMSA
Trigger: AGCTGACATTAAAGGCCGGCATTCCCAAAGGTGTGG...CTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp GAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTCCCCCAGGTGGGAGGTaGTGTGCACCCAGGCTCAAG +
Preference number: 4 (lower is better)
Translates to: EALFSLGGAHLTQPRAASPPGGR*CAPRLK
Trigger: CTTGAGCCTGGGTGCACAGCACCTCCCACCTGGGGG...AGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp CAGCCAAGGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGCCCCCAGGTGGGAGGTaGTGTGCACCCAGGCTCAAG +
Preference number: 4 (lower is better)
Translates to: QPRAASDWTEGVQDADMVPPGGR*CAPRLK
Trigger: CTTGAGCCTGGGTGCACAGCACCTCCCACCTGGGGG...CACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp CAGGATGGTCTGAGAGTCTCTGGCCGACCAGGGAGCCAGATCCTGGGAGGACGTACACCCACCACTTCGTaGCCCTCCTTCCTCAGGTGG +
Preference number: 4 (lower is better)
Translates to: QDGLRVSGRPGSQILGGRTPTTS*PSFLRW
Trigger: CCACCTGAGGAAGGAGGGCCACGAAGTGGTGGGTGT...ACGTCCTCCCAGGATCTGGCTCCCTGGTCGGCCAGAGACTCTCAGACCATCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp GGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCCAGGCTGAGGGAGTCTaGGGGCTTTGCCCTCAGCGA +
Preference number: 4 (lower is better)
Translates to: GLLLTGQRASKMQTWCAGQAEGV*GLCPQR
Trigger: TCGCTGAGGGCAAAGCCCCCAGACTCCCTCAGCCTG...GCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp TTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGACTGGCAGGCTGAGGGAGTCTaGGGGCTTTGCCCTCAGCGA +
Preference number: 4 (lower is better)
Translates to: LFSLGGAHLTQPRAASDWQAEGV*GLCPQR
Trigger: TCGCTGAGGGCAAAGCCCCCAGACTCCCTCAGCCTG...CCAGTCAGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp CTGGGGGCTTTGCCCTCAGCGATCAGCCTCACGGCCTGCACCATCCCTTTGATGGGATCCAGTTGTGAATaGCCTCTGCCGGCTGGTCCC +
Preference number: 4 (lower is better)
Translates to: LGALPSAISLTACTIPLMGSSCE*PLPAGP
Trigger: GGGACCAGCCGGCAGAGGCCATTCACAACTGGATCC...CATCAAAGGGATGGTGCAGGCCGTGAGGCTGATCGCTGAGGGCAAAGCCCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000493803.5
CDS-3UTR CCA 90 bp GGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCACCACCCCTGGCCGATaGGCTCCTGGGATGGGCAAA +
Preference number: 4 (lower is better)
Translates to: GLLLTGQRASKMQTWCAGTTPGR*APGMGK
Trigger: TTTGCCCATCCCAGGAGCCCATCGGCCAGGGGTGGT...GCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp TTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGACTGGCCAGGGCCTCAATGGTaGCCAGCTCCTCCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: LFSLGGAHLTQPRAASDWPGPQW*PAPPGA
Trigger: AGCACCAGGAGGAGCTGGCCACCATTGAGGCCCTGG...CCAGTCAGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000472186.5
CDS-3UTR CCA 90 bp CCCGTGGTCGGTGTCCCTGTCCAGCGGGTTGCCCACCTTCATCTTCCGCACCTCCTCAAAGAAGAACCCTaGCCGAGGGACCTGATTCCC +
Preference number: 4 (lower is better)
Translates to: PVVGVPVQRVAHLHLPHLLKEEP*PRDLIP
Trigger: GGGAATCAGGTCCCTCGGCCAGGGTTCTTCTTTGAG...GAGGTGCGGAAGATGAAGGTGGGCAACCCGCTGGACAGGGACACCGACCACGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp AGGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGAACACAGTGCCTGCCTaGAGCTTGTCACTGACATAC +
Preference number: 4 (lower is better)
Translates to: RWEVLCTQAQEGGGPSHENTVPA*SLSLTY
Trigger: GTATGTCAGTGACAAGCTCCAGGCAGGCACTGTGTT...CTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp CCCGTGGTCGGTGTCCCTGTCCAGCGGGTTGCCCACCTTCATCTTCCGCACCTCTCCAAGATGCAGACATaGTGTGCAGGCAGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: PVVGVPVQRVAHLHLPHLSKMQT*CAGRRA
Trigger: AGCCCTCCTGCCTGCACACCATGTCTGCATCTTGGA...GAGGTGCGGAAGATGAAGGTGGGCAACCCGCTGGACAGGGACACCGACCACGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp CCCGTGGTCGGTGTCCCTGTCCAGCGGGTTGCCCACCTTCATCTTCCGCACCTCAAGCTTTATTCTCCCTaGGAGGGGCACACCTCACCC +
Preference number: 4 (lower is better)
Translates to: PVVGVPVQRVAHLHLPHLKLYSP*EGHTSP
Trigger: GGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTT...GAGGTGCGGAAGATGAAGGTGGGCAACCCGCTGGACAGGGACACCGACCACGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp CGTGTTGACAAACACAGTGCCTGCCTGGAGCTTGTCACTGACATACAGGGCCTTACCGCGCGCAGGAGTTaGTGCGGGCGTCCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: RVDKHSACLELVTDIQGLTARRS*CGRPGQ
Trigger: CTGCCCGGGACGCCCGCACCAACTCCTGCGCGCGGT...AAGGCCCTGTATGTCAGTGACAAGCTCCAGGCAGGCACTGTGTTTGTCAACACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp GGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCGGATCCAGTTGTGAATaGCCGAGGCCCCTCGGTGCC +
Preference number: 4 (lower is better)
Translates to: GLLLTGQRASKMQTWCAGGSSCE*PRPLGA
Trigger: GGCACCGAGGGGCCTCGGCCATTCACAACTGGATCC...GCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452905.6
CDS-3UTR CCA 90 bp GGGAGTCTGGGGGCTTTGCCCTCAGCGATCAGCCTCACGGCCTGCACCATCCCTTTTGGAAGCATCCCTTaGCTTCCGCACCTCCTCACC +
Preference number: 4 (lower is better)
Translates to: GSLGALPSAISLTACTIPFGSIP*LPHLLT
Trigger: GGTGAGGAGGTGCGGAAGCCAAGGGATGCTTCCAAA...AGGGATGGTGCAGGCCGTGAGGCTGATCGCTGAGGGCAAAGCCCCCAGACTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR CCA 90 bp TCCCGGCACCTTGTCGTTCCCGCGGATCCAGTTGTGAATGGCCTCTGCCGGCTGAGCCTGCGCCCACTTTaGAAGCATCCCTTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: SRHLVVPADPVVNGLCRLSLRPL*KHPLAS
Trigger: GGAAGCCAAGGGATGCTTCCAAAGTGGGCGCAGGCT...CAGCCGGCAGAGGCCATTCACAACTGGATCCGCGGGAACGACAAGGTGCCGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR CCA 90 bp TCCCGGCACCTTGTCGTTCCCGCGGATCCAGTTGTGAATGGCCTCTGCCGGCTGTCAGGACCAGCCGGGTaGTCAGGGACAAATCAGGGT +
Preference number: 4 (lower is better)
Translates to: SRHLVVPADPVVNGLCRLSGPAG*SGTNQG
Trigger: ACCCTGATTTGTCCCTGACCACCCGGCTGGTCCTGA...CAGCCGGCAGAGGCCATTCACAACTGGATCCGCGGGAACGACAAGGTGCCGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493803.5
CDS-3UTR TCA 90 bp TTCTGTTCACAGGCCTCTGTCCAGGCTCCCGGCACCTTGTCGTTCCCGCGGATCGCCACCGGGAGTACTTaGATACCGGCACTCCATCCT +
Preference number: 4 (lower is better)
Translates to: FCSQASVQAPGTLSFPRIATGST*IPALHP
Trigger: AGGATGGAGTGCCGGTATTCAAGTACTCCCGGTGGC...GATCCGCGGGAACGACAAGGTGCCGGGAGCCTGGACAGAGGCCTGTGAACAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR TCA 90 bp GCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGAGAAGGGCAGGACGTTaGGCTCGGCCCCCAAAGCCT +
Preference number: 4 (lower is better)
Translates to: AASDWTEGVQDADMVCRQRRAGR*ARPPKP
Trigger: AGGCTTTGGGGGCCGAGCTCAACGTCCTGCCCTTCT...CTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp TTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCAGAAGGGCAGGACGTTaGGCTCGGCCCCCAAAGCCT +
Preference number: 4 (lower is better)
Translates to: FRSFILPGRGTPHPAKGCRRAGR*ARPPKP
Trigger: AGGCTTTGGGGGCCGAGCTCAACGTCCTGCCCTTCT...GCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GCCAGGAAGGGTAGGGAGCCCAGCTTTCCCAGAACAGAGAAGTGGGTAAACTGCCCGCGGATCCAGTTGTaGATGGCCTCTGCCGGCTGG +
Preference number: 4 (lower is better)
Translates to: ARKGREPSFPRTEKWVNCPRIQL*MASAGW
Trigger: CCAGCCGGCAGAGGCCATTCACAACTGGATCCGCGG...GCAGTTTACCCACTTCTCTGTTCTGGGAAAGCTGGGCTCCCTACCCTTCCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493803.5
CDS-3UTR TCA 90 bp GCCCTTGCTGTCTTCTGCGTGCAGGAGCTAAGTCCCCTCCAGCCCAGGCTGGTGCACAGACGCGGCCCCTaGCTTGAAGAAATCAGTGGA +
Preference number: 4 (lower is better)
Translates to: ALAVFCVQELSPLQPRLVHRRGP*LEEISG
Trigger: TCCACTGATTTCTTCAAGTCAGGGGCCGCGTCTGTG...CACCAGCCTGGGCTGGAGGGGACTTAGCTCCTGCACGCAGAAGACAGCAAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR TCA 90 bp TCCGTGGCATTGGCCCGAGACAGCACGGCATCCAAGTCCCCATCAGCAAACCGACCTTGTCGACGTCGGTaGCTTGGGCCAGGGATACCT +
Preference number: 4 (lower is better)
Translates to: SVALARDSTASKSPSANRPCRRR*LGPGIP
Trigger: AGGTATCCCTGGCCCAAGTCACCGACGTCGACAAGG...TCGGTTTGCTGATGGGGACTTGGATGCCGTGCTGTCTCGGGCCAATGCCACGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR TCA 90 bp GGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCCCTTGTCGACGTCGGTaGCTTGGGCCAGGGATACCT +
Preference number: 4 (lower is better)
Translates to: GLLLTGQRASKMQTWCAGPCRRR*LGPGIP
Trigger: AGGTATCCCTGGCCCAAGTCACCGACGTCGACAAGG...GCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp CAGCCAAGGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGGGTCTGGCCTGGTTaGTGGGGATGGTGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: QPRAASDWTEGVQDADMVWVWPG*WGWWSP
Trigger: AGGGCTCCACCATCCCCATCAACCAGGCCAGACCCA...CACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGTGGGTCTGGCCTGGTTaGTGGGGATGGTGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: AASDWTEGVQDADMVCRQWVWPG*WGWWSP
Trigger: AGGGCTCCACCATCCCCATCAACCAGGCCAGACCCA...CTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTTGGGTCTGGCCTGGTTaGTGGGGATGGTGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: EALFSLGGAHLTQPRAASWVWPG*WGWWSP
Trigger: AGGGCTCCACCATCCCCATCAACCAGGCCAGACCCA...AGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGACAAGGTGGGCATGGTaGTTCTGCGGCCCGTGGTCG +
Preference number: 4 (lower is better)
Translates to: AASDWTEGVQDADMVCRQTRWAW*FCGPWS
Trigger: CGACCACGGGCCGCAGAATCACCATGCCCACCTTGT...CTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp TTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCACAAGGTGGGCATGGTaGTTCTGCGGCCCGTGGTCG +
Preference number: 4 (lower is better)
Translates to: FRSFILPGRGTPHPAKGCTRWAW*FCGPWS
Trigger: CGACCACGGGCCGCAGAATCACCATGCCCACCTTGT...GCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp CAGCCAAGGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGACAAGGTGGGCATGGTaGTTCTGCGGCCCGTGGTCG +
Preference number: 4 (lower is better)
Translates to: QPRAASDWTEGVQDADMVTRWAW*FCGPWS
Trigger: CGACCACGGGCCGCAGAATCACCATGCCCACCTTGT...CACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp CCGAGGGACCTGATTCCCGCCGCAGACCAGTGTGGCCCCTTCCTTCACGCCATGCAAATCCAGACTGTTTaGATCCTCCGAAGGGAGCGG +
Preference number: 4 (lower is better)
Translates to: PRDLIPAADQCGPFLHAMQIQTV*ILRRER
Trigger: CCGCTCCCTTCGGAGGATTCAAACAGTCTGGATTTG...CATGGCGTGAAGGAAGGGGCCACACTGGTCTGCGGCGGGAATCAGGTCCCTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR TCA 90 bp CTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGGGCCAAGGGCTGCTTCTaGCTGGACAGAGGGCGTCCA +
Preference number: 4 (lower is better)
Translates to: LLLTGQRASKMQTWCAGRAKGCF*LDRGRP
Trigger: TGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGC...CCTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp TTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCGCCAAGGGCTGCTTCTaGCTGGACAGAGGGCGTCCA +
Preference number: 4 (lower is better)
Translates to: FRSFILPGRGTPHPAKGCAKGCF*LDRGRP
Trigger: TGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGC...GCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GTTTCTGTTCACAGGCCTCTGTCCAGGCTCCCGGCACCTTGTCGTTCCCGCGGACCTAGGGTCTTCCTGTaGGGCCTGAGTCCAAGGACA +
Preference number: 4 (lower is better)
Translates to: VSVHRPLSRLPAPCRSRGPRVFL*GLSPRT
Trigger: TGTCCTTGGACTCAGGCCTCACAGGAAGACCCTAGG...TCCGCGGGAACGACAAGGTGCCGGGAGCCTGGACAGAGGCCTGTGAACAGAAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493803.5
CDS-3UTR GCA 90 bp GTCTTCCACGTCTGTGAAAACAGTTGGCTCAAAGAAGAACCCTGGCCGAGGGACGCCGAGGCCCCTCGGTaGCTAGGGAGCAGTGACGGG +
Preference number: 4 (lower is better)
Translates to: VFHVCENSWLKEEPWPRDAEAPR*LGSSDG
Trigger: CCCGTCACTGCTCCCTAGGCACCGAGGGGCCTCGGC...GTCCCTCGGCCAGGGTTCTTCTTTGAGCCAACTGTTTTCACAGACGTGGAAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR GCA 90 bp TTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGACTGGAGCGGTTGTACAGCGTaGTCACGGTGTCGTCCGGGA +
Preference number: 4 (lower is better)
Translates to: LFSLGGAHLTQPRAASDWSGCTA*SRCRPG
Trigger: TCCCGGACGACACCGTGAGCACGCTGTACAACCGCT...CCAGTCAGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp TTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGACTGGGGAGTCTGGGGGCTTTaGCCTCAGCGATCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: LFSLGGAHLTQPRAASDWGVWGL*PQRSAS
Trigger: TGAGGCTGATCGCTGAGGGCAAAGCCCCCAGACTCC...CCAGTCAGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp TCACAGGCCTCTGTCCAGGCTCCCGGCACCTTGTCGTTCCCGCGGATCCAGTTGGTTGTGAATGGCCTCTaGCGGCTGGTCCCAGTTGAT +
Preference number: 4 (lower is better)
Translates to: SQASVQAPGTLSFPRIQLVVNGL*RLVPVD
Trigger: ATCAACTGGGACCAGCCGGCAGAGGCCATTCACAAC...CAACTGGATCCGCGGGAACGACAAGGTGCCGGGAGCCTGGACAGAGGCCTGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000493803.5
CDS-3UTR GCA 90 bp AGGGAGTCTGGGGGCTTTGCCCTCAGCGATCAGCCTCACGGCCTGCACCATCCCAAAGAGGATGAGTCCTaGTTTGGTGACCACCCCTGG +
Preference number: 4 (lower is better)
Translates to: RESGGFALSDQPHGLHHPKEDES*FGDHPW
Trigger: CCAGGGGTGGTCACCAAAGCAGGACTCATCCTCTTT...GGGATGGTGCAGGCCGTGAGGCTGATCGCTGAGGGCAAAGCCCCCAGACTCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000493803.5
CDS-3UTR GCA 90 bp GGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGAGGCCAGGATCATTTTaGCATCCTCCAGCTGAATAT +
Preference number: 4 (lower is better)
Translates to: GGRCCAPRLKREGAPATRRPGSF*HPPAEY
Trigger: ATATTCAGCTGGAGGATGGCAAAATGATCCTGGCCT...CCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp CAGCCAAGGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGCTTGGCTGCGGCCACTaGCTTGTCGACGTCGGTGAC +
Preference number: 4 (lower is better)
Translates to: QPRAASDWTEGVQDADMVLGCGH*LVDVGD
Trigger: GTCACCGACGTCGACAAGGCAGTGGCCGCAGCCAAG...CACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp TCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTCTTGGCTGCGGCCACTaGCTTGTCGACGTCGGTGAC +
Preference number: 4 (lower is better)
Translates to: SEALFSLGGAHLTQPRAALGCGH*LVDVGD
Trigger: GTCACCGACGTCGACAAGGCAGTGGCCGCAGCCAAG...AGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp TTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGACTGGGCCAGCTCCTCCTGGTaGTGCTCCATGAGATCTGCC +
Preference number: 4 (lower is better)
Translates to: LFSLGGAHLTQPRAASDWASSSW*CSMRSA
Trigger: GGCAGATCTCATGGAGCAGCACCAGGAGGAGCTGGC...CCAGTCAGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000472186.5
CDS-3UTR GCA 90 bp GGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCGCCAGCTCCTCCTGGTaGTGCTCCATGAGATCTGCC +
Preference number: 4 (lower is better)
Translates to: GLLLTGQRASKMQTWCAGASSSW*CSMRSA
Trigger: GGCAGATCTCATGGAGCAGCACCAGGAGGAGCTGGC...GCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000472186.5
CDS-3UTR GCA 90 bp GGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGAAAGAGTCGGCCTGCTaGAATGCAATTCTCTCCTTT +
Preference number: 4 (lower is better)
Translates to: GGRCCAPRLKREGAPATRKESAC*NAILSF
Trigger: AAAGGAGAGAATTGCATTGCAGCAGGCCGACTCTTT...CCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp TTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGACTGGCCCTGTCCAGCGGGTTaGCCACCTTCATCTTCCGCA +
Preference number: 4 (lower is better)
Translates to: LFSLGGAHLTQPRAASDWPCPAG*PPSSSA
Trigger: TGCGGAAGATGAAGGTGGGCAACCCGCTGGACAGGG...CCAGTCAGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp GGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCCCCTGTCCAGCGGGTTaGCCACCTTCATCTTCCGCA +
Preference number: 4 (lower is better)
Translates to: GLLLTGQRASKMQTWCAGPCPAG*PPSSSA
Trigger: TGCGGAAGATGAAGGTGGGCAACCCGCTGGACAGGG...GCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp GGCAGTACTCCATCAGCTTCACAAGGTGGGCATGGTGATTCTGCGGCCCGTGGTAACCCCGCAGGGGCCTaGGCTCTTTCCCGCTTAGGT +
Preference number: 4 (lower is better)
Translates to: GSTPSASQGGHGDSAARGNPAGA*ALSRLG
Trigger: ACCTAAGCGGGAAAGAGCGCAGGCCCCTGCGGGGTT...ACCACGGGCCGCAGAATCACCATGCCCACCTTGTGAAGCTGATGGAGTACTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455064.6
CDS-3UTR GCA 90 bp TCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTCCACGTTGTGGGGTCTaGTATCCGGCCTCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: SEALFSLGGAHLTQPRAAPRCGV*YPASLC
Trigger: GCAGAGGGAGGCCGGATAGCAGACCCCACAACGTGG...AGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472186.5
CDS-3UTR CCA 90 bp TTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGACTGGACACCCACCACTTCGTaGCCCTCCTTCCTCAGGTGG +
Preference number: 4 (lower is better)
Translates to: LFSLGGAHLTQPRAASDWTPTTS*PSFLRW
Trigger: CCACCTGAGGAAGGAGGGCCACGAAGTGGTGGGTGT...CCAGTCAGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp CTGGCAGTACTCCATCAGCTTCACAAGGTGGGCATGGTGATTCTGCGGCCCGTGCAGGCTGAGGGAGTCTaGGGGCTTTGCCCTCAGCGA +
Preference number: 4 (lower is better)
Translates to: LAVLHQLHKVGMVILRPVQAEGV*GLCPQR
Trigger: TCGCTGAGGGCAAAGCCCCCAGACTCCCTCAGCCTG...CACGGGCCGCAGAATCACCATGCCCACCTTGTGAAGCTGATGGAGTACTGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp AGTCTCTGGCCGACCAGGGAGCCAGATCCTGGGAGGACGTTAACCACACCTTTGCAGGCTGAGGGAGTCTaGGGGCTTTGCCCTCAGCGA +
Preference number: 4 (lower is better)
Translates to: SLWPTREPDPGRTLTTPLQAEGV*GLCPQR
Trigger: TCGCTGAGGGCAAAGCCCCCAGACTCCCTCAGCCTG...CAAAGGTGTGGTTAACGTCCTCCCAGGATCTGGCTCCCTGGTCGGCCAGAGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp CATCCTTCTCAGCTTCCAGACAGTGGCAGCTGCTTCCTGCAGTCGCTGTCCCCACAGGCTGAGGGAGTCTaGGGGCTTTGCCCTCAGCGA +
Preference number: 4 (lower is better)
Translates to: HPSQLPDSGSCFLQSLSPQAEGV*GLCPQR
Trigger: TCGCTGAGGGCAAAGCCCCCAGACTCCCTCAGCCTG...TGGGGACAGCGACTGCAGGAAGCAGCTGCCACTGTCTGGAAGCTGAGAAGGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR CCA 90 bp TCACAGGCCTCTGTCCAGGCTCCCGGCACCTTGTCGTTCCCGCGGATCCAGTTGGAATCCCCTCATAGGTaGCTCCTTCCTCAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: SQASVQAPGTLSFPRIQLESPHR*LLPQAE
Trigger: CTCAGCCTGAGGAAGGAGCCACCTATGAGGGGATTC...CAACTGGATCCGCGGGAACGACAAGGTGCCGGGAGCCTGGACAGAGGCCTGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000493803.5
CDS-3UTR CCA 90 bp TCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTGGCCGATGGGCTCCTaGGATGGGCAAAGCGTCTCC +
Preference number: 4 (lower is better)
Translates to: SEALFSLGGAHLTQPRAAWPMGS*DGQSVS
Trigger: GGAGACGCTTTGCCCATCCCAGGAGCCCATCGGCCA...AGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGACCACCCCTGGCCGATaGGCTCCTGGGATGGGCAAA +
Preference number: 4 (lower is better)
Translates to: AASDWTEGVQDADMVCRQTTPGR*APGMGK
Trigger: TTTGCCCATCCCAGGAGCCCATCGGCCAGGGGTGGT...CTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp CCAAATTCCGTGGCATTGGCCCGAGACAGCACGGCATCCAAGTCCCCATCAGCAACCACCCCTGGCCGATaGGCTCCTGGGATGGGCAAA +
Preference number: 4 (lower is better)
Translates to: PNSVALARDSTASKSPSATTPGR*APGMGK
Trigger: TTTGCCCATCCCAGGAGCCCATCGGCCAGGGGTGGT...TGCTGATGGGGACTTGGATGCCGTGCTGTCTCGGGCCAATGCCACGGAATTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp CAGCCAAGGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGACCACCCCTGGCCGATaGGCTCCTGGGATGGGCAAA +
Preference number: 4 (lower is better)
Translates to: QPRAASDWTEGVQDADMVTTPGR*APGMGK
Trigger: TTTGCCCATCCCAGGAGCCCATCGGCCAGGGGTGGT...CACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCTTTGGTGACCACCCCTaGCCGATGGGCTCCTGGGAT +
Preference number: 4 (lower is better)
Translates to: GLLLTGQRASKMQTWCAGFGDHP*PMGSWD
Trigger: ATCCCAGGAGCCCATCGGCCAGGGGTGGTCACCAAA...GCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp TTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGACTGGCCAATGAAGAGCTGGTaGGGCATGCGGACAGTGCGC +
Preference number: 4 (lower is better)
Translates to: LFSLGGAHLTQPRAASDWPMKSW*GMRTVR
Trigger: GCGCACTGTCCGCATGCCCCACCAGCTCTTCATTGG...CCAGTCAGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GCCAAATTCCGTGGCATTGGCCCGAGACAGCACGGCATCCAAGTCCCCATCAGCCCCCCAATGAAGAGCTaGTGGGGCATGCGGACAGTG +
Preference number: 4 (lower is better)
Translates to: AKFRGIGPRQHGIQVPISPPMKS*WGMRTV
Trigger: CACTGTCCGCATGCCCCACCAGCTCTTCATTGGGGG...GCTGATGGGGACTTGGATGCCGTGCTGTCTCGGGCCAATGCCACGGAATTTGGC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp TTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGACTGGCCCCCAATGAAGAGCTaGTGGGGCATGCGGACAGTG +
Preference number: 4 (lower is better)
Translates to: LFSLGGAHLTQPRAASDWPPMKS*WGMRTV
Trigger: CACTGTCCGCATGCCCCACCAGCTCTTCATTGGGGG...CCAGTCAGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCTCGACGTCGGTGACTTaGGCCAGGGATACCTGGCAG +
Preference number: 4 (lower is better)
Translates to: GLLLTGQRASKMQTWCAGSTSVT*ARDTWQ
Trigger: CTGCCAGGTATCCCTGGCCCAAGTCACCGACGTCGA...GCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp CTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGGCCAGGGCCTCAATGGTaGCCAGCTCCTCCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: LLLTGQRASKMQTWCAGRPGPQW*PAPPGA
Trigger: AGCACCAGGAGGAGCTGGCCACCATTGAGGCCCTGG...CCTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000472186.5
CDS-3UTR CCA 90 bp TTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCCCAGGGCCTCAATGGTaGCCAGCTCCTCCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: FRSFILPGRGTPHPAKGCPGPQW*PAPPGA
Trigger: AGCACCAGGAGGAGCTGGCCACCATTGAGGCCCTGG...GCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCCGGTTGGGTCTGGCCTaGTTGATGGGGATGGTGGAG +
Preference number: 4 (lower is better)
Translates to: GLLLTGQRASKMQTWCAGRLGLA*LMGMVE
Trigger: CTCCACCATCCCCATCAACCAGGCCAGACCCAACCG...GCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp CCATCAGCTTCACAAGGTGGGCATGGTGATTCTGCGGCCCGTGGTCGGTGTCCCCAGGGAGCCAGATCCTaGGAGGACGTTAACCACACC +
Preference number: 4 (lower is better)
Translates to: PSASQGGHGDSAARGRCPQGARS*EDVNHT
Trigger: GGTGTGGTTAACGTCCTCCCAGGATCTGGCTCCCTG...GGGACACCGACCACGGGCCGCAGAATCACCATGCCCACCTTGTGAAGCTGATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp CTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGGCGCCGCAGACCAGTGTaGCCCCTTCCTTCACGCCAT +
Preference number: 4 (lower is better)
Translates to: LLLTGQRASKMQTWCAGRRRRPV*PLPSRH
Trigger: ATGGCGTGAAGGAAGGGGCCACACTGGTCTGCGGCG...CCTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp TCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTCGCCGCAGACCAGTGTaGCCCCTTCCTTCACGCCAT +
Preference number: 4 (lower is better)
Translates to: SEALFSLGGAHLTQPRAARRRPV*PLPSRH
Trigger: ATGGCGTGAAGGAAGGGGCCACACTGGTCTGCGGCG...AGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GGCAGTACTCCATCAGCTTCACAAGGTGGGCATGGTGATTCTGCGGCCCGTGGTCCAGTCCGCGAGCTCTaGTTAAGGCCAGAGCCCGTG +
Preference number: 4 (lower is better)
Translates to: GSTPSASQGGHGDSAARGPVREL*LRPEPV
Trigger: CACGGGCTCTGGCCTTAACCAGAGCTCGCGGACTGG...ACCACGGGCCGCAGAATCACCATGCCCACCTTGTGAAGCTGATGGAGTACTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455064.6
3UTR CAA 72 bp CCATTCTCAAAGGCATCCTTGGCTGCGGCCACTGCCTaGTCGACGTCGGTGACTTGGGCCAGGGATACCTGG +
Preference number: 4 (lower is better)
Translates to: PFSKASLAAATA*STSVTWARDTW
Trigger: CCAGGTATCCCTGGCCCAAGTCACCGACGTCGACAAGGCAGTGGCCGCAGCCAAGGATGCCTTTGAGAATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR TCA 90 bp GGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCGCCACCGGGAGTACTTaGATACCGGCACTCCATCCT +
Preference number: 4 (lower is better)
Translates to: GLLLTGQRASKMQTWCAGATGST*IPALHP
Trigger: AGGATGGAGTGCCGGTATTCAAGTACTCCCGGTGGC...GCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp TTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGACTGGGCCACCGGGAGTACTTaGATACCGGCACTCCATCCT +
Preference number: 4 (lower is better)
Translates to: LFSLGGAHLTQPRAASDWATGST*IPALHP
Trigger: AGGATGGAGTGCCGGTATTCAAGTACTCCCGGTGGC...CCAGTCAGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GCCACTGCCCAGAAGCTGATGGTGGCAGTGGCTGGCAGGTACATGTTGGGCTCCGTGCCTAGGGAGCAGTaGCGGGTGATAGATGATGGA +
Preference number: 4 (lower is better)
Translates to: ATAQKLMVAVAGRYMLGSVPREQ*RVIDDG
Trigger: TCCATCATCTATCACCCGTCACTGCTCCCTAGGCAC...GGAGCCCAACATGTACCTGCCAGCCACTGCCACCATCAGCTTCTGGGCAGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR TCA 90 bp CCGAGGGACCTGATTCCCGCCGCAGACCAGTGTGGCCCCTTCCTTCACGCCATGTTGCCATCCTCCAGCTaGATATTCTTCACCAGCAGC +
Preference number: 4 (lower is better)
Translates to: PRDLIPAADQCGPFLHAMLPSSS*IFFTSS
Trigger: GCTGCTGGTGAAGAATATTCAGCTGGAGGATGGCAA...CATGGCGTGAAGGAAGGGGCCACACTGGTCTGCGGCGGGAATCAGGTCCCTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR TCA 90 bp GAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTCCTTGTCGACGTCGGTaGCTTGGGCCAGGGATACCT +
Preference number: 4 (lower is better)
Translates to: EALFSLGGAHLTQPRAASPCRRR*LGPGIP
Trigger: AGGTATCCCTGGCCCAAGTCACCGACGTCGACAAGG...AGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGCCTTGTCGACGTCGGTaGCTTGGGCCAGGGATACCT +
Preference number: 4 (lower is better)
Translates to: AASDWTEGVQDADMVCRQPCRRR*LGPGIP
Trigger: AGGTATCCCTGGCCCAAGTCACCGACGTCGACAAGG...CTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp CTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGGCCTTGTCGACGTCGGTaGCTTGGGCCAGGGATACCT +
Preference number: 4 (lower is better)
Translates to: LLLTGQRASKMQTWCAGRPCRRR*LGPGIP
Trigger: AGGTATCCCTGGCCCAAGTCACCGACGTCGACAAGG...CCTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp TCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTTGGGTCTGGCCTGGTTaGTGGGGATGGTGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: SSEALFSLGGAHLTQPRAWVWPG*WGWWSP
Trigger: AGGGCTCCACCATCCCCATCAACCAGGCCAGACCCA...AGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp TTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGACTGGGTGAGTGGGGTCACCTaGGCAGGCTTGATCACCACT +
Preference number: 4 (lower is better)
Translates to: LFSLGGAHLTQPRAASDWVSGVT*AGLITT
Trigger: AGTGGTGATCAAGCCTGCTCAGGTGACCCCACTCAC...CCAGTCAGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCGTGAGTGGGGTCACCTaGGCAGGCTTGATCACCACT +
Preference number: 4 (lower is better)
Translates to: GLLLTGQRASKMQTWCAGVSGVT*AGLITT
Trigger: AGTGGTGATCAAGCCTGCTCAGGTGACCCCACTCAC...GCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp TTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGACTGGCACATCAGGATGGTCTaGGAGTCTCTGGCCGACCAG +
Preference number: 4 (lower is better)
Translates to: LFSLGGAHLTQPRAASDWHIRMV*ESLADQ
Trigger: CTGGTCGGCCAGAGACTCTCAGACCATCCTGATGTG...CCAGTCAGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp CTCTCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCCAAGGGCTGCTTCTaGCTGGACAGAGGGCGTCCA +
Preference number: 4 (lower is better)
Translates to: LSSEALFSLGGAHLTQPRAKGCF*LDRGRP
Trigger: TGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGC...CCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GTGGACGGTCTCTCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCGCCAAGGGCTGCTTCTaGCTGGACAGAGGGCGTCCA +
Preference number: 4 (lower is better)
Translates to: VDGLSSEALFSLGGAHLTAKGCF*LDRGRP
Trigger: TGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGC...GGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGAGAGACCGTCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455064.6
CDS-3UTR TCA 90 bp ATCCTTGGCTGCGGCCACTGCCTTGTCGACGTCGGTGACTTGGGCCAGGGATACTTAGAGCCTCTGGTGTaGTGTTTGGGCCCTGACTGG +
Preference number: 4 (lower is better)
Translates to: ILGCGHCLVDVGDLGQGYLEPLV*CLGPDW
Trigger: CCAGTCAGGGCCCAAACATCACACCAGAGGCTCTAA...GTATCCCTGGCCCAAGTCACCGACGTCGACAAGGCAGTGGCCGCAGCCAAGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR GCA 90 bp GGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCGAATTTGCAGCCGCTTaGAGAGGCGGCCCCTTAGCA +
Preference number: 4 (lower is better)
Translates to: GLLLTGQRASKMQTWCAGEFAAA*RGGPLA
Trigger: TGCTAAGGGGCCGCCTCTGCAAGCGGCTGCAAATTC...GCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273450.7
CDS-3UTR GCA 90 bp CTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGGAGCGGTTGTACAGCGTaGTCACGGTGTCGTCCGGGA +
Preference number: 4 (lower is better)
Translates to: LLLTGQRASKMQTWCAGRSGCTA*SRCRPG
Trigger: TCCCGGACGACACCGTGAGCACGCTGTACAACCGCT...CCTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp GAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGGAGTCTGGGGGCTTTaGCCTCAGCGATCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: EALFSLGGAHLTQPRAASGVWGL*PQRSAS
Trigger: TGAGGCTGATCGCTGAGGGCAAAGCCCCCAGACTCC...AGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp GCATTGGCCCGAGACAGCACGGCATCCAAGTCCCCATCAGCAAACCGAGAGATGGGAGTCTGGGGGCTTTaGCCTCAGCGATCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: ALARDSTASKSPSANREMGVWGL*PQRSAS
Trigger: TGAGGCTGATCGCTGAGGGCAAAGCCCCCAGACTCC...CATCTCTCGGTTTGCTGATGGGGACTTGGATGCCGTGCTGTCTCGGGCCAATGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR GCA 90 bp TCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTGGAGTCTGGGGGCTTTaGCCTCAGCGATCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: SEALFSLGGAHLTQPRAAGVWGL*PQRSAS
Trigger: TGAGGCTGATCGCTGAGGGCAAAGCCCCCAGACTCC...AGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp AGGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGAGGCCAGGATCATTTTaGCATCCTCCAGCTGAATAT +
Preference number: 4 (lower is better)
Translates to: RWEVLCTQAQEGGGPSHERPGSF*HPPAEY
Trigger: ATATTCAGCTGGAGGATGGCAAAATGATCCTGGCCT...CTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp CCGAGGGACCTGATTCCCGCCGCAGACCAGTGTGGCCCCTTCCTTCACGCCATGAAGGACACTGCTGGCTaGCCCCTTAAAGAAGTTCGA +
Preference number: 4 (lower is better)
Translates to: PRDLIPAADQCGPFLHAMKDTAG*PLKEVR
Trigger: TCGAACTTCTTTAAGGGGGCAGCCAGCAGTGTCCTT...CATGGCGTGAAGGAAGGGGCCACACTGGTCTGCGGCGGGAATCAGGTCCCTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR GCA 90 bp GCCACTGCCCAGAAGCTGATGGTGGCAGTGGCTGGCAGGTACATGTTGGGCTCCCGCAGTAACCAGCTCTaGCTCTGTCAGCTCAAGGAC +
Preference number: 4 (lower is better)
Translates to: ATAQKLMVAVAGRYMLGSRSNQL*LCQLKD
Trigger: GTCCTTGAGCTGACAGAGGCAGAGCTGGTTACTGCG...GGAGCCCAACATGTACCTGCCAGCCACTGCCACCATCAGCTTCTGGGCAGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR GCA 90 bp TCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTTGGGGAGGATCCGCTaGCAAACACTCCGCACAGCC +
Preference number: 4 (lower is better)
Translates to: SEALFSLGGAHLTQPRAALGRIR*QTLRTA
Trigger: GGCTGTGCGGAGTGTTTGGCAGCGGATCCTCCCCAA...AGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp TCCCTGGTGAAGACACCAGAAGCCAGGCCAAATTCCGTGGCATTGGCCCGAGACTTGGGGAGGATCCGCTaGCAAACACTCCGCACAGCC +
Preference number: 4 (lower is better)
Translates to: SLVKTPEARPNSVALARDLGRIR*QTLRTA
Trigger: GGCTGTGCGGAGTGTTTGGCAGCGGATCCTCCCCAA...GTCTCGGGCCAATGCCACGGAATTTGGCCTGGCTTCTGGTGTCTTCACCAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR GCA 90 bp TCATTCCCAAAGAGGATGAGTCCTGCTTTGGTGACCACCCCTGGCCGATGGGCTCTTGGCTGCGGCCACTaGCTTGTCGACGTCGGTGAC +
Preference number: 4 (lower is better)
Translates to: SFPKRMSPALVTTPGRWALGCGH*LVDVGD
Trigger: GTCACCGACGTCGACAAGGCAGTGGCCGCAGCCAAG...AGCCCATCGGCCAGGGGTGGTCACCAAAGCAGGACTCATCCTCTTTGGGAATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR GCA 90 bp TTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGACTGGAAAGGCATCCTTGGCTaGGGCCACTGCCTTGTCGAC +
Preference number: 4 (lower is better)
Translates to: LFSLGGAHLTQPRAASDWKGILG*GHCLVD
Trigger: GTCGACAAGGCAGTGGCCGCAGCCAAGGATGCCTTT...CCAGTCAGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp CAGCCAAGGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGGCCAGCTCCTCCTGGTaGTGCTCCATGAGATCTGCC +
Preference number: 4 (lower is better)
Translates to: QPRAASDWTEGVQDADMVASSSW*CSMRSA
Trigger: GGCAGATCTCATGGAGCAGCACCAGGAGGAGCTGGC...CACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000472186.5
CDS-3UTR GCA 90 bp GGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGGTCTGGATGGACATaGCCACGTGGGTCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: GLLLTGQRASKMQTWCAGRSGWT*PRGSSG
Trigger: CCCTGAAGACCCACGTGGGCATGTCCATCCAGACCT...GCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000472186.5
CDS-3UTR GCA 90 bp CAGCCAAGGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGCCCTGTCCAGCGGGTTaGCCACCTTCATCTTCCGCA +
Preference number: 4 (lower is better)
Translates to: QPRAASDWTEGVQDADMVPCPAG*PPSSSA
Trigger: TGCGGAAGATGAAGGTGGGCAACCCGCTGGACAGGG...CACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp TCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTCCCTGTCCAGCGGGTTaGCCACCTTCATCTTCCGCA +
Preference number: 4 (lower is better)
Translates to: SEALFSLGGAHLTQPRAAPCPAG*PPSSSA
Trigger: TGCGGAAGATGAAGGTGGGCAACCCGCTGGACAGGG...AGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp CATCTTCCGCACCTCTTCTACCACTCTCCGCACGAACTCATCATGAATGGAGTCGCGCGCAGGAGTTGGTaGGGGCGTCCCGGGCAGGTT +
Preference number: 4 (lower is better)
Translates to: HLPHLFYHSPHELIMNGVARRSW*GRPGQV
Trigger: AACCTGCCCGGGACGCCCGCACCAACTCCTGCGCGC...GACTCCATTCATGATGAGTTCGTGCGGAGAGTGGTAGAAGAGGTGCGGAAGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR GCA 90 bp ACACTCCGCACAGCCTCCGCAGTAACCAGCTCTGCCTCTGTCAGCTCAAGGACACCAGACAGTGGCAGCTaGTTCCTGCAGTCGCTGTCC +
Preference number: 4 (lower is better)
Translates to: TLRTASAVTSSASVSSRTPDSGS*FLQSLS
Trigger: GGACAGCGACTGCAGGAAGCAGCTGCCACTGTCTGG...TGTCCTTGAGCTGACAGAGGCAGAGCTGGTTACTGCGGAGGCTGTGCGGAGTGT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR GCA 90 bp CTCTCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGTATCCGGCCTCCCTCTaGACGCGCGACCGTCCACTT +
Preference number: 4 (lower is better)
Translates to: LSSEALFSLGGAHLTQPRYPASL*TRDRPL
Trigger: AAGTGGACGGTCGCGCGTGCAGAGGGAGGCCGGATA...CCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472186.5
CDS-3UTR GCA 90 bp CTGGGGGCTTTGCCCTCAGCGATCAGCCTCACGGCCTGCACCATCCCTTTGATGGAGAAGTGGGTAAACTaGCTCGGACACCCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: LGALPSAISLTACTIPLMEKWVN*LGHPVL
Trigger: GAGCACAGGGTGTCCGAGGCAGTTTACCCACTTCTC...CATCAAAGGGATGGTGCAGGCCGTGAGGCTGATCGCTGAGGGCAAAGCCCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493803.5
CDS-3UTR CCA 90 bp CTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGGACACCCACCACTTCGTaGCCCTCCTTCCTCAGGTGG +
Preference number: 4 (lower is better)
Translates to: LLLTGQRASKMQTWCAGRTPTTS*PSFLRW
Trigger: CCACCTGAGGAAGGAGGGCCACGAAGTGGTGGGTGT...CCTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp TCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTACACCCACCACTTCGTaGCCCTCCTTCCTCAGGTGG +
Preference number: 4 (lower is better)
Translates to: SEALFSLGGAHLTQPRAATPTTS*PSFLRW
Trigger: CCACCTGAGGAAGGAGGGCCACGAAGTGGTGGGTGT...AGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCATGGCCTCTGCCGGCTaGTCCCAGTTGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: GLLLTGQRASKMQTWCAGMASAG*SQLILA
Trigger: AGCCAAGATCAACTGGGACCAGCCGGCAGAGGCCAT...GCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp CAGCCAAGGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGGGATCCAGTTGTGAATaGCCTCTGCCGGCTGGTCCC +
Preference number: 4 (lower is better)
Translates to: QPRAASDWTEGVQDADMVGSSCE*PLPAGP
Trigger: GGGACCAGCCGGCAGAGGCCATTCACAACTGGATCC...CACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp CTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGGGGATCCAGTTGTGAATaGCCTCTGCCGGCTGGTCCC +
Preference number: 4 (lower is better)
Translates to: LLLTGQRASKMQTWCAGRGSSCE*PLPAGP
Trigger: GGGACCAGCCGGCAGAGGCCATTCACAACTGGATCC...CCTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp TTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTTGGTGACCACCCCTaGCCGATGGGCTCCTGGGAT +
Preference number: 4 (lower is better)
Translates to: FRSFILPGRGTPHPAKGCFGDHP*PMGSWD
Trigger: ATCCCAGGAGCCCATCGGCCAGGGGTGGTCACCAAA...GCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp TCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTTTGGTGACCACCCCTaGCCGATGGGCTCCTGGGAT +
Preference number: 4 (lower is better)
Translates to: SEALFSLGGAHLTQPRAAFGDHP*PMGSWD
Trigger: ATCCCAGGAGCCCATCGGCCAGGGGTGGTCACCAAA...AGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp CAGCCAAGGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTTTGGTGACCACCCCTaGCCGATGGGCTCCTGGGAT +
Preference number: 4 (lower is better)
Translates to: QPRAASDWTEGVQDADMVFGDHP*PMGSWD
Trigger: ATCCCAGGAGCCCATCGGCCAGGGGTGGTCACCAAA...CACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTCCCCCAATGAAGAGCTaGTGGGGCATGCGGACAGTG +
Preference number: 4 (lower is better)
Translates to: EALFSLGGAHLTQPRAASPPMKS*WGMRTV
Trigger: CACTGTCCGCATGCCCCACCAGCTCTTCATTGGGGG...AGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTTGGTCTCAGAGGTCTTaGCGCCCTCGGCATCCACGA +
Preference number: 4 (lower is better)
Translates to: EALFSLGGAHLTQPRAASWSQRS*RPRHPR
Trigger: TCGTGGATGCCGAGGGCGCCAAGACCTCTGAGACCA...AGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp CTCTCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGCCAGGGCCTCAATGGTaGCCAGCTCCTCCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: LSSEALFSLGGAHLTQPRPGPQW*PAPPGA
Trigger: AGCACCAGGAGGAGCTGGCCACCATTGAGGCCCTGG...CCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000472186.5
CDS-3UTR CCA 90 bp TTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCCATCCAGGGCCTCAATaGTGGCCAGCTCCTCCTGGT +
Preference number: 4 (lower is better)
Translates to: FRSFILPGRGTPHPAKGCHPGPQ*WPAPPG
Trigger: ACCAGGAGGAGCTGGCCACCATTGAGGCCCTGGATG...GCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGCATCCAGGGCCTCAATaGTGGCCAGCTCCTCCTGGT +
Preference number: 4 (lower is better)
Translates to: AASDWTEGVQDADMVCRQHPGPQ*WPAPPG
Trigger: ACCAGGAGGAGCTGGCCACCATTGAGGCCCTGGATG...CTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000472186.5
CDS-3UTR CCA 90 bp TCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTCATCCAGGGCCTCAATaGTGGCCAGCTCCTCCTGGT +
Preference number: 4 (lower is better)
Translates to: SEALFSLGGAHLTQPRAAHPGPQ*WPAPPG
Trigger: ACCAGGAGGAGCTGGCCACCATTGAGGCCCTGGATG...AGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000472186.5
CDS-3UTR CCA 90 bp TTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGACTGGGGGATGGTGGAGCCCTaGATCTTGTCACACCAGCCA +
Preference number: 4 (lower is better)
Translates to: LFSLGGAHLTQPRAASDWGMVEP*ILSHQP
Trigger: TGGCTGGTGTGACAAGATCCAGGGCTCCACCATCCC...CCAGTCAGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000472186.5
CDS-3UTR CCA 90 bp CAGCCAAGGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGCGGTTGGGTCTGGCCTaGTTGATGGGGATGGTGGAG +
Preference number: 4 (lower is better)
Translates to: QPRAASDWTEGVQDADMVRLGLA*LMGMVE
Trigger: CTCCACCATCCCCATCAACCAGGCCAGACCCAACCG...CACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GTGTCCCTGTCCAGCGGGTTGCCCACCTTCATCTTCCGCACCTCTTCTACCACTCGGTTGGGTCTGGCCTaGTTGATGGGGATGGTGGAG +
Preference number: 4 (lower is better)
Translates to: VSLSSGLPTFIFRTSSTTRLGLA*LMGMVE
Trigger: CTCCACCATCCCCATCAACCAGGCCAGACCCAACCG...AGTGGTAGAAGAGGTGCGGAAGATGAAGGTGGGCAACCCGCTGGACAGGGACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp TCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTCGGTTGGGTCTGGCCTaGTTGATGGGGATGGTGGAG +
Preference number: 4 (lower is better)
Translates to: SEALFSLGGAHLTQPRAARLGLA*LMGMVE
Trigger: CTCCACCATCCCCATCAACCAGGCCAGACCCAACCG...AGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp ATCACCACTGTGTTCCCGGCAGCCAGGCAGGCAGCTGTCTTCCAGGACAGCATCTGGTCTGAGAGTCTCTaGCCGACCAGGGAGCCAGAT +
Preference number: 4 (lower is better)
Translates to: ITTVFPAARQAAVFQDSIWSESL*PTREPD
Trigger: ATCTGGCTCCCTGGTCGGCCAGAGACTCTCAGACCA...GATGCTGTCCTGGAAGACAGCTGCCTGCCTGGCTGCCGGGAACACAGTGGTGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp GGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCTGGTCTGAGAGTCTCTaGCCGACCAGGGAGCCAGAT +
Preference number: 4 (lower is better)
Translates to: GLLLTGQRASKMQTWCAGWSESL*PTREPD
Trigger: ATCTGGCTCCCTGGTCGGCCAGAGACTCTCAGACCA...GCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp CTCTCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGCGCCGCAGACCAGTGTaGCCCCTTCCTTCACGCCAT +
Preference number: 4 (lower is better)
Translates to: LSSEALFSLGGAHLTQPRRRRPV*PLPSRH
Trigger: ATGGCGTGAAGGAAGGGGCCACACTGGTCTGCGGCG...CCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp CGGTGTCCCTGTCCAGCGGGTTGCCCACCTTCATCTTCCGCACCTCTTCTACCACCAGGCCAAATTCCGTaGCATTGGCCCGAGACAGCA +
Preference number: 4 (lower is better)
Translates to: RCPCPAGCPPSSSAPLLPPGQIP*HWPETA
Trigger: TGCTGTCTCGGGCCAATGCCACGGAATTTGGCCTGG...TGGTAGAAGAGGTGCGGAAGATGAAGGTGGGCAACCCGCTGGACAGGGACACCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp GACCTTTCTTCAGTATTCGAAGGTCACTGTCTTGACCCGCAGGTACTCGTTCAGACCGCGCGCAGGAGTTaGTGCGGGCGTCCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: DLSSVFEGHCLDPQVLVQTARRS*CGRPGQ
Trigger: CTGCCCGGGACGCCCGCACCAACTCCTGCGCGCGGT...CTGAACGAGTACCTGCGGGTCAAGACAGTGACCTTCGAATACTGAAGAAAGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp CATCCTTCTCAGCTTCCAGACAGTGGCAGCTGCTTCCTGCAGTCGCTGTCCCCATCTGTCACTCTGTCCTaGTGTCCAGGGGGTCGGCCT +
Preference number: 4 (lower is better)
Translates to: HPSQLPDSGSCFLQSLSPSVTLS*CPGGRP
Trigger: AGGCCGACCCCCTGGACACCAGGACAGAGTGACAGA...TGGGGACAGCGACTGCAGGAAGCAGCTGCCACTGTCTGGAAGCTGAGAAGGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000511283.2
3UTR CAA 72 bp CTGATCTTCCCCCACCGTCCATTCTCAAAGGCATCCTaGGCTGCGGCCACTGCCTTGTCGACGTCGGTGACT +
Preference number: 4 (lower is better)
Translates to: LIFPHRPFSKAS*AAATALSTSVT
Trigger: AGTCACCGACGTCGACAAGGCAGTGGCCGCAGCCAAGGATGCCTTTGAGAATGGACGGTGGGGGAAGATCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR TCA 90 bp GGCAGTACTCCATCAGCTTCACAAGGTGGGCATGGTGATTCTGCGGCCCGTGGTGCCACCGGGAGTACTTaGATACCGGCACTCCATCCT +
Preference number: 4 (lower is better)
Translates to: GSTPSASQGGHGDSAARGATGST*IPALHP
Trigger: AGGATGGAGTGCCGGTATTCAAGTACTCCCGGTGGC...ACCACGGGCCGCAGAATCACCATGCCCACCTTGTGAAGCTGATGGAGTACTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR TCA 90 bp TGTCCAGCGGGTTGCCCACCTTCATCTTCCGCACCTCTTCTACCACTCTCCGCAGCCACCGGGAGTACTTaGATACCGGCACTCCATCCT +
Preference number: 4 (lower is better)
Translates to: CPAGCPPSSSAPLLPLSAATGST*IPALHP
Trigger: AGGATGGAGTGCCGGTATTCAAGTACTCCCGGTGGC...TGCGGAGAGTGGTAGAAGAGGTGCGGAAGATGAAGGTGGGCAACCCGCTGGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR TCA 90 bp TCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTCCGGCTGGTCCCAGTTaGTCTTGGCTGTCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: SEALFSLGGAHLTQPRAAPAGPS*SWLSPS
Trigger: AGAAGGAGACAGCCAAGATCAACTGGGACCAGCCGG...AGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GTGTCCCTGTCCAGCGGGTTGCCCACCTTCATCTTCCGCACCTCTTCTACCACTCCGGCTGGTCCCAGTTaGTCTTGGCTGTCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: VSLSSGLPTFIFRTSSTTPAGPS*SWLSPS
Trigger: AGAAGGAGACAGCCAAGATCAACTGGGACCAGCCGG...AGTGGTAGAAGAGGTGCGGAAGATGAAGGTGGGCAACCCGCTGGACAGGGACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR TCA 90 bp GCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGCCGGCTGGTCCCAGTTaGTCTTGGCTGTCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: AASDWTEGVQDADMVCRQPAGPS*SWLSPS
Trigger: AGAAGGAGACAGCCAAGATCAACTGGGACCAGCCGG...CTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp AGTCCAAGGACAGGAGCATGGGTGGCTTTGAGCAGGCAAGTGACCCACAGCCGTCCGGCTGGTCCCAGTTaGTCTTGGCTGTCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: SPRTGAWVALSRQVTHSRPAGPS*SWLSPS
Trigger: AGAAGGAGACAGCCAAGATCAACTGGGACCAGCCGG...ACGGCTGTGGGTCACTTGCCTGCTCAAAGCCACCCATGCTCCTGTCCTTGGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493803.5
CDS-3UTR TCA 90 bp GGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCCACAGACGCGGCCCCTaGCTTGAAGAAATCAGTGGA +
Preference number: 4 (lower is better)
Translates to: GLLLTGQRASKMQTWCAGHRRGP*LEEISG
Trigger: TCCACTGATTTCTTCAAGTCAGGGGCCGCGTCTGTG...GCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp ACATCAGGATGGTCTGAGAGTCTCTGGCCGACCAGGGAGCCAGATCCTGGGAGGCACAGACGCGGCCCCTaGCTTGAAGAAATCAGTGGA +
Preference number: 4 (lower is better)
Translates to: TSGWSESLWPTREPDPGRHRRGP*LEEISG
Trigger: TCCACTGATTTCTTCAAGTCAGGGGCCGCGTCTGTG...CCTCCCAGGATCTGGCTCCCTGGTCGGCCAGAGACTCTCAGACCATCCTGATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR TCA 90 bp CTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGGGTGAGTGGGGTCACCTaGGCAGGCTTGATCACCACT +
Preference number: 4 (lower is better)
Translates to: LLLTGQRASKMQTWCAGRVSGVT*AGLITT
Trigger: AGTGGTGATCAAGCCTGCTCAGGTGACCCCACTCAC...CCTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTCACATCAGGATGGTCTaGGAGTCTCTGGCCGACCAG +
Preference number: 4 (lower is better)
Translates to: EALFSLGGAHLTQPRAASHIRMV*ESLADQ
Trigger: CTGGTCGGCCAGAGACTCTCAGACCATCCTGATGTG...AGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp CAGCCAAGGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGCACATCAGGATGGTCTaGGAGTCTCTGGCCGACCAG +
Preference number: 4 (lower is better)
Translates to: QPRAASDWTEGVQDADMVHIRMV*ESLADQ
Trigger: CTGGTCGGCCAGAGACTCTCAGACCATCCTGATGTG...CACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp TCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTCACATCAGGATGGTCTaGGAGTCTCTGGCCGACCAG +
Preference number: 4 (lower is better)
Translates to: SEALFSLGGAHLTQPRAAHIRMV*ESLADQ
Trigger: CTGGTCGGCCAGAGACTCTCAGACCATCCTGATGTG...AGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp ATTCCCGCCGCAGACCAGTGTGGCCCCTTCCTTCACGCCATGCTGGCAGTACTCCCTCTGTGGAGCCTGTaGACCCGATTTTCCTCACAT +
Preference number: 4 (lower is better)
Translates to: IPAADQCGPFLHAMLAVLPLWSL*TRFSSH
Trigger: ATGTGAGGAAAATCGGGTTCACAGGCTCCACAGAGG...GAGTACTGCCAGCATGGCGTGAAGGAAGGGGCCACACTGGTCTGCGGCGGGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR TCA 90 bp TCCGTGGCATTGGCCCGAGACAGCACGGCATCCAAGTCCCCATCAGCAAACCGAAAAGATGATGAGGGGTaGCTTCCCGCCCAGTTCCAG +
Preference number: 4 (lower is better)
Translates to: SVALARDSTASKSPSANRKDDEG*LPAQFQ
Trigger: CTGGAACTGGGCGGGAAGTCACCCCTCATCATCTTT...TCGGTTTGCTGATGGGGACTTGGATGCCGTGCTGTCTCGGGCCAATGCCACGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000455064.6
CDS-3UTR TCA 90 bp CCACTCTCCGCACGAACTCATCATGAATGGAGTCCTCCACAAAGAGTCGGCCTGACAAGGTGGGCATGGTaGTTCTGCGGCCCGTGGTCG +
Preference number: 4 (lower is better)
Translates to: PLSARTHHEWSPPQRVGLTRWAW*FCGPWS
Trigger: CGACCACGGGCCGCAGAATCACCATGCCCACCTTGT...CAGGCCGACTCTTTGTGGAGGACTCCATTCATGATGAGTTCGTGCGGAGAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR TCA 90 bp CGCAGACCAGTGTGGCCCCTTCCTTCACGCCATGCTGGCAGTACTCCATCAGCTCGAAGGTCACTGTCTTaGCCCGCAGGTACTCGTTCA +
Preference number: 4 (lower is better)
Translates to: RRPVWPLPSRHAGSTPSARRSLS*PAGTRS
Trigger: TGAACGAGTACCTGCGGGTCAAGACAGTGACCTTCG...AGCTGATGGAGTACTGCCAGCATGGCGTGAAGGAAGGGGCCACACTGGTCTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR TCA 90 bp GAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTCAGGTTAGACTTCTGTaGGCCGCAGCCCCGAAACTG +
Preference number: 4 (lower is better)
Translates to: EALFSLGGAHLTQPRAASQVRLL*AAAPKL
Trigger: CAGTTTCGGGGCTGCGGCTCACAGAAGTCTAACCTG...AGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
CDS-3UTR TCA 90 bp CTTCCTGCAGTCGCTGTCCCCAATAACTTTGGGCTCTCTGCCTTCCACTCTTCACCAGCCTGGCCCATCTaGTGGCCTCGGTCCCATAGC +
Preference number: 4 (lower is better)
Translates to: LPAVAVPNNFGLSAFHSSPAWPI*WPRSHS
Trigger: GCTATGGGACCGAGGCCATCAGATGGGCCAGGCTGG...TGAAGAGTGGAAGGCAGAGAGCCCAAAGTTATTGGGGACAGCGACTGCAGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR TCA 90 bp GTGAATGGCCTCTGCCGGCTGGTCCCAGTTGATCTTGGCTGTCTCCTTCTTCTGTCTTATCTCCGTGAATaGGGGTCCCAGGGGGTCGGC +
Preference number: 4 (lower is better)
Translates to: VNGLCRLVPVDLGCLLLLSYLRE*GSQGVG
Trigger: GCCGACCCCCTGGGACCCTCATTCACGGAGATAAGA...CAGAAGAAGGAGACAGCCAAGATCAACTGGGACCAGCCGGCAGAGGCCATTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493803.5
CDS-3UTR GCA 90 bp CAGTTTCTGTTCACAGGCCTCTGTCCAGGCTCCCGGCACCTTGTCGTTCCCGCGCAAAGCCTGTCCTTTTaGACGCCACCGGGAGTACTT +
Preference number: 4 (lower is better)
Translates to: QFLFTGLCPGSRHLVVPAQSLSF*TPPGVL
Trigger: AAGTACTCCCGGTGGCGTGCAAAAGGACAGGCTTTG...CGCGGGAACGACAAGGTGCCGGGAGCCTGGACAGAGGCCTGTGAACAGAAACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR GCA 90 bp CTGTCCCCAATAACTTTGGGCTCTCTGCCTTCCACTCTTCAATACCCAAGGAACGCCGAGGCCCCTCGGTaGCTAGGGAGCAGTGACGGG +
Preference number: 4 (lower is better)
Translates to: LSPITLGSLPSTLQYPRNAEAPR*LGSSDG
Trigger: CCCGTCACTGCTCCCTAGGCACCGAGGGGCCTCGGC...GTTCCTTGGGTATTGAAGAGTGGAAGGCAGAGAGCCCAAAGTTATTGGGGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR GCA 90 bp CTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGGACCTCACACTCCTTCTaGAGCAGCAGGTCTCCGGTG +
Preference number: 4 (lower is better)
Translates to: LLLTGQRASKMQTWCAGRTSHSF*SSRSPV
Trigger: CACCGGAGACCTGCTGCTGCAGAAGGAGTGTGAGGT...CCTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp CTCTCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGAGCGGTTGTACAGCGTaGTCACGGTGTCGTCCGGGA +
Preference number: 4 (lower is better)
Translates to: LSSEALFSLGGAHLTQPRSGCTA*SRCRPG
Trigger: TCCCGGACGACACCGTGAGCACGCTGTACAACCGCT...CCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp TTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGACTGGCGCAGTAACCAGCTCTaGCTCTGTCAGCTCAAGGAC +
Preference number: 4 (lower is better)
Translates to: LFSLGGAHLTQPRAASDWRSNQL*LCQLKD
Trigger: GTCCTTGAGCTGACAGAGGCAGAGCTGGTTACTGCG...CCAGTCAGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp GGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCCCACGTAGTCAATGCTaGACTCGCCCTCCTCATCGT +
Preference number: 4 (lower is better)
Translates to: GLLLTGQRASKMQTWCAGPRSQC*TRPPHR
Trigger: ACGATGAGGAGGGCGAGTGCAGCATTGACTACGTGG...GCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp TTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGACTGGGGGGCATGCGGACAGTaGGCTTGTTCACTGCCATTT +
Preference number: 4 (lower is better)
Translates to: LFSLGGAHLTQPRAASDWGACGQ*ACSLPF
Trigger: AAATGGCAGTGAACAAGCGCACTGTCCGCATGCCCC...CCAGTCAGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp TCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTAGAGCTGGTGGGGCATaGGGACAGTGCGCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: SEALFSLGGAHLTQPRAARAGGA*GQCACS
Trigger: TGAACAAGCGCACTGTCCGCATGCCCCACCAGCTCT...AGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp GCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGAGAGCTGGTGGGGCATaGGGACAGTGCGCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: AASDWTEGVQDADMVCRQRAGGA*GQCACS
Trigger: TGAACAAGCGCACTGTCCGCATGCCCCACCAGCTCT...CTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp CTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGGAGAGCTGGTGGGGCATaGGGACAGTGCGCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: LLLTGQRASKMQTWCAGRRAGGA*GQCACS
Trigger: TGAACAAGCGCACTGTCCGCATGCCCCACCAGCTCT...CCTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp TTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCAAAGGCATCCTTGGCTaGGGCCACTGCCTTGTCGAC +
Preference number: 4 (lower is better)
Translates to: FRSFILPGRGTPHPAKGCKGILG*GHCLVD
Trigger: GTCGACAAGGCAGTGGCCGCAGCCAAGGATGCCTTT...GCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp GTGTCCCTGTCCAGCGGGTTGCCCACCTTCATCTTCCGCACCTCTTCTACCACTAAAGGCATCCTTGGCTaGGGCCACTGCCTTGTCGAC +
Preference number: 4 (lower is better)
Translates to: VSLSSGLPTFIFRTSSTTKGILG*GHCLVD
Trigger: GTCGACAAGGCAGTGGCCGCAGCCAAGGATGCCTTT...AGTGGTAGAAGAGGTGCGGAAGATGAAGGTGGGCAACCCGCTGGACAGGGACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR GCA 90 bp GCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGAAAGGCATCCTTGGCTaGGGCCACTGCCTTGTCGAC +
Preference number: 4 (lower is better)
Translates to: AASDWTEGVQDADMVCRQKGILG*GHCLVD
Trigger: GTCGACAAGGCAGTGGCCGCAGCCAAGGATGCCTTT...CTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp CCAAATTCCGTGGCATTGGCCCGAGACAGCACGGCATCCAAGTCCCCATCAGCAAAAGGCATCCTTGGCTaGGGCCACTGCCTTGTCGAC +
Preference number: 4 (lower is better)
Translates to: PNSVALARDSTASKSPSAKGILG*GHCLVD
Trigger: GTCGACAAGGCAGTGGCCGCAGCCAAGGATGCCTTT...TGCTGATGGGGACTTGGATGCCGTGCTGTCTCGGGCCAATGCCACGGAATTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR GCA 90 bp GGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGCTCCTCCTGGTGCTaGTCCATGAGATCTGCCAAC +
Preference number: 4 (lower is better)
Translates to: GLLLTGQRASKMQTWCAGSSSWC*SMRSAN
Trigger: GTTGGCAGATCTCATGGAGCAGCACCAGGAGGAGCT...GCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000472186.5
CDS-3UTR GCA 90 bp TTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCAGGTCTGGATGGACATaGCCACGTGGGTCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: FRSFILPGRGTPHPAKGCRSGWT*PRGSSG
Trigger: CCCTGAAGACCCACGTGGGCATGTCCATCCAGACCT...GCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000472186.5
CDS-3UTR GCA 90 bp TCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTAGGTCTGGATGGACATaGCCACGTGGGTCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: SEALFSLGGAHLTQPRAARSGWT*PRGSSG
Trigger: CCCTGAAGACCCACGTGGGCATGTCCATCCAGACCT...AGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000472186.5
CDS-3UTR GCA 90 bp TTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTGGTCAAGGTCAGGTTaGGGTTGGGTCTGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: FRSFILPGRGTPHPAKGCWSRSG*GWVWPG
Trigger: ACCAGGCCAGACCCAACCGCAACCTGACCTTGACCA...GCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp GCATTGGCCCGAGACAGCACGGCATCCAAGTCCCCATCAGCAAACCGAGAGATGTGGTCAAGGTCAGGTTaGGGTTGGGTCTGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: ALARDSTASKSPSANREMWSRSG*GWVWPG
Trigger: ACCAGGCCAGACCCAACCGCAACCTGACCTTGACCA...CATCTCTCGGTTTGCTGATGGGGACTTGGATGCCGTGCTGTCTCGGGCCAATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR GCA 90 bp GAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTTGGTCAAGGTCAGGTTaGGGTTGGGTCTGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: EALFSLGGAHLTQPRAASWSRSG*GWVWPG
Trigger: ACCAGGCCAGACCCAACCGCAACCTGACCTTGACCA...AGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp TCCCTGGTGAAGACACCAGAAGCCAGGCCAAATTCCGTGGCATTGGCCCGAGACTGGTCAAGGTCAGGTTaGGGTTGGGTCTGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: SLVKTPEARPNSVALARDWSRSG*GWVWPG
Trigger: ACCAGGCCAGACCCAACCGCAACCTGACCTTGACCA...GTCTCGGGCCAATGCCACGGAATTTGGCCTGGCTTCTGGTGTCTTCACCAGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR GCA 90 bp TTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGACTGGCCTTCCTTCACGCCATaGTGGCAGTACTCCATCAGC +
Preference number: 4 (lower is better)
Translates to: LFSLGGAHLTQPRAASDWPSFTP*WQYSIS
Trigger: GCTGATGGAGTACTGCCAGCATGGCGTGAAGGAAGG...CCAGTCAGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp GGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCCCTTCCTTCACGCCATaGTGGCAGTACTCCATCAGC +
Preference number: 4 (lower is better)
Translates to: GLLLTGQRASKMQTWCAGPSFTP*WQYSIS
Trigger: GCTGATGGAGTACTGCCAGCATGGCGTGAAGGAAGG...GCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp CTCATCATGAATGGAGTCCTCCACAAAGAGTCGGCCTGCTGCAATGCAATTCTCGCGCGCAGGAGTTGGTaGGGGCGTCCCGGGCAGGTT +
Preference number: 4 (lower is better)
Translates to: LIMNGVLHKESACCNAILARRSW*GRPGQV
Trigger: AACCTGCCCGGGACGCCCGCACCAACTCCTGCGCGC...GAGAATTGCATTGCAGCAGGCCGACTCTTTGTGGAGGACTCCATTCATGATGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR GCA 90 bp TTCTCAGCTTCCAGACAGTGGCAGCTGCTTCCTGCAGTCGCTGTCCCCAATAACCTGGGAGGCCCAGCCTaGGCCCACTTTGGAAGCATC +
Preference number: 4 (lower is better)
Translates to: FSASRQWQLLPAVAVPNNLGGPA*AHFGSI
Trigger: GATGCTTCCAAAGTGGGCGCAGGCTGGGCCTCCCAG...GTTATTGGGGACAGCGACTGCAGGAAGCAGCTGCCACTGTCTGGAAGCTGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR CCA 90 bp CAGCCAAGGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGATGGCCTCTGCCGGCTaGTCCCAGTTGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: QPRAASDWTEGVQDADMVMASAG*SQLILA
Trigger: AGCCAAGATCAACTGGGACCAGCCGGCAGAGGCCAT...CACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp CTCTCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGGATCCAGTTGTGAATaGCCTCTGCCGGCTGGTCCC +
Preference number: 4 (lower is better)
Translates to: LSSEALFSLGGAHLTQPRGSSCE*PLPAGP
Trigger: GGGACCAGCCGGCAGAGGCCATTCACAACTGGATCC...CCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp TCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTTTTGGTGACCACCCCTaGCCGATGGGCTCCTGGGAT +
Preference number: 4 (lower is better)
Translates to: SSEALFSLGGAHLTQPRAFGDHP*PMGSWD
Trigger: ATCCCAGGAGCCCATCGGCCAGGGGTGGTCACCAAA...AGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCCAACCTCCAGGACTTTaGGGAGGATCCGCTGCCAAA +
Preference number: 4 (lower is better)
Translates to: GLLLTGQRASKMQTWCAGQPPGL*GGSAAK
Trigger: TTTGGCAGCGGATCCTCCCCAAAGTCCTGGAGGTTG...GCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp CGATTTTCCTCACATCAGGATGGTCTGAGAGTCTCTGGCCGACCAGGGAGCCAGCCAATGAAGAGCTGGTaGGGCATGCGGACAGTGCGC +
Preference number: 4 (lower is better)
Translates to: RFSSHQDGLRVSGRPGSQPMKSW*GMRTVR
Trigger: GCGCACTGTCCGCATGCCCCACCAGCTCTTCATTGG...CTGGCTCCCTGGTCGGCCAGAGACTCTCAGACCATCCTGATGTGAGGAAAATCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp TCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTCCAATGAAGAGCTGGTaGGGCATGCGGACAGTGCGC +
Preference number: 4 (lower is better)
Translates to: SSEALFSLGGAHLTQPRAPMKSW*GMRTVR
Trigger: GCGCACTGTCCGCATGCCCCACCAGCTCTTCATTGG...AGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp CTCTCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGCCCCCAATGAAGAGCTaGTGGGGCATGCGGACAGTG +
Preference number: 4 (lower is better)
Translates to: LSSEALFSLGGAHLTQPRPPMKS*WGMRTV
Trigger: CACTGTCCGCATGCCCCACCAGCTCTTCATTGGGGG...CCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp TCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTCCCCCAATGAAGAGCTaGTGGGGCATGCGGACAGTG +
Preference number: 4 (lower is better)
Translates to: SSEALFSLGGAHLTQPRAPPMKS*WGMRTV
Trigger: CACTGTCCGCATGCCCCACCAGCTCTTCATTGGGGG...AGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp CGATTTTCCTCACATCAGGATGGTCTGAGAGTCTCTGGCCGACCAGGGAGCCAGTGGTCTCAGAGGTCTTaGCGCCCTCGGCATCCACGA +
Preference number: 4 (lower is better)
Translates to: RFSSHQDGLRVSGRPGSQWSQRS*RPRHPR
Trigger: TCGTGGATGCCGAGGGCGCCAAGACCTCTGAGACCA...CTGGCTCCCTGGTCGGCCAGAGACTCTCAGACCATCCTGATGTGAGGAAAATCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp TCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTTGGTCTCAGAGGTCTTaGCGCCCTCGGCATCCACGA +
Preference number: 4 (lower is better)
Translates to: SSEALFSLGGAHLTQPRAWSQRS*RPRHPR
Trigger: TCGTGGATGCCGAGGGCGCCAAGACCTCTGAGACCA...AGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp TTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGACTGGTCTCAAAGGCATCCTTaGCTGCGGCCACTGCCTTGT +
Preference number: 4 (lower is better)
Translates to: LFSLGGAHLTQPRAASDWSQRHP*LRPLPC
Trigger: ACAAGGCAGTGGCCGCAGCCAAGGATGCCTTTGAGA...CCAGTCAGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp CAGCCAAGGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGAGCGGAAGGTCTGGATaGACATGCCCACGTGGGTCT +
Preference number: 4 (lower is better)
Translates to: QPRAASDWTEGVQDADMVSGRSG*TCPRGS
Trigger: AGACCCACGTGGGCATGTCCATCCAGACCTTCCGCT...CACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGGGATGGTGGAGCCCTaGATCTTGTCACACCAGCCA +
Preference number: 4 (lower is better)
Translates to: EALFSLGGAHLTQPRAASGMVEP*ILSHQP
Trigger: TGGCTGGTGTGACAAGATCCAGGGCTCCACCATCCC...AGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000472186.5
CDS-3UTR CCA 90 bp CAGCCAAGGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGGGGATGGTGGAGCCCTaGATCTTGTCACACCAGCCA +
Preference number: 4 (lower is better)
Translates to: QPRAASDWTEGVQDADMVGMVEP*ILSHQP
Trigger: TGGCTGGTGTGACAAGATCCAGGGCTCCACCATCCC...CACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCCTTCAAGGCTGTGAGTaGGGTCACCTGAGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: GLLLTGQRASKMQTWCAGLQGCE*GHLSRL
Trigger: AAGCCTGCTCAGGTGACCCCACTCACAGCCTTGAAG...GCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp TCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTGGTCTGAGAGTCTCTaGCCGACCAGGGAGCCAGAT +
Preference number: 4 (lower is better)
Translates to: SEALFSLGGAHLTQPRAAWSESL*PTREPD
Trigger: ATCTGGCTCCCTGGTCGGCCAGAGACTCTCAGACCA...AGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGTGGTCTGAGAGTCTCTaGCCGACCAGGGAGCCAGAT +
Preference number: 4 (lower is better)
Translates to: AASDWTEGVQDADMVCRQWSESL*PTREPD
Trigger: ATCTGGCTCCCTGGTCGGCCAGAGACTCTCAGACCA...CTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp CACGGCATCCAAGTCCCCATCAGCAAACCGAGAGATGATCATGACAGGCCCGAACGCCGCAGACCAGTGTaGCCCCTTCCTTCACGCCAT +
Preference number: 4 (lower is better)
Translates to: HGIQVPISKPRDDHDRPERRRPV*PLPSRH
Trigger: ATGGCGTGAAGGAAGGGGCCACACTGGTCTGCGGCG...TTCGGGCCTGTCATGATCATCTCTCGGTTTGCTGATGGGGACTTGGATGCCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp TTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGACTGGCTCAAAGAAGAACCCTaGCCGAGGGACCTGATTCCC +
Preference number: 4 (lower is better)
Translates to: LFSLGGAHLTQPRAASDWLKEEP*PRDLIP
Trigger: GGGAATCAGGTCCCTCGGCCAGGGTTCTTCTTTGAG...CCAGTCAGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp CAGCCAAGGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGCCAGGCCAAATTCCGTaGCATTGGCCCGAGACAGCA +
Preference number: 4 (lower is better)
Translates to: QPRAASDWTEGVQDADMVPGQIP*HWPETA
Trigger: TGCTGTCTCGGGCCAATGCCACGGAATTTGGCCTGG...CACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTCCAGGCCAAATTCCGTaGCATTGGCCCGAGACAGCA +
Preference number: 4 (lower is better)
Translates to: EALFSLGGAHLTQPRAASPGQIP*HWPETA
Trigger: TGCTGTCTCGGGCCAATGCCACGGAATTTGGCCTGG...AGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGCCAGGCCAAATTCCGTaGCATTGGCCCGAGACAGCA +
Preference number: 4 (lower is better)
Translates to: AASDWTEGVQDADMVCRQPGQIP*HWPETA
Trigger: TGCTGTCTCGGGCCAATGCCACGGAATTTGGCCTGG...CTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp TTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGACTGGTCCAAGATGCAGACATaGTGTGCAGGCAGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: LFSLGGAHLTQPRAASDWSKMQT*CAGRRA
Trigger: AGCCCTCCTGCCTGCACACCATGTCTGCATCTTGGA...CCAGTCAGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GTTGACAAACACAGTGCCTGCCTGGAGCTTGTCACTGACATACAGGGCCTTGTTCTGGGAGCCAGGAGGTaGGACCTGTCCCCGCCAGTC +
Preference number: 4 (lower is better)
Translates to: VDKHSACLELVTDIQGLVLGARR*DLSPPV
Trigger: GACTGGCGGGGACAGGTCCCACCTCCTGGCTCCCAG...AACAAGGCCCTGTATGTCAGTGACAAGCTCCAGGCAGGCACTGTGTTTGTCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455064.6
CDS-3UTR CCA 90 bp ATCCTTCTCAGCTTCCAGACAGTGGCAGCTGCTTCCTGCAGTCGCTGTCCCCAATGTTTGGGCCCTGACTaGACTGGCTCTCCTCTCCGG +
Preference number: 4 (lower is better)
Translates to: ILLSFQTVAAASCSRCPQCLGPD*TGSPLR
Trigger: CCGGAGAGGAGAGCCAGTCCAGTCAGGGCCCAAACA...TTGGGGACAGCGACTGCAGGAAGCAGCTGCCACTGTCTGGAAGCTGAGAAGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000511283.2
CDS-3UTR CCA 90 bp TTCTGTTCACAGGCCTCTGTCCAGGCTCCCGGCACCTTGTCGTTCCCGCGGATCCTGGCAGGTACATGTTaGGCTCCCACCTGTACATCA +
Preference number: 4 (lower is better)
Translates to: FCSQASVQAPGTLSFPRILAGTC*APTCTS
Trigger: TGATGTACAGGTGGGAGCCCAACATGTACCTGCCAG...GATCCGCGGGAACGACAAGGTGCCGGGAGCCTGGACAGAGGCCTGTGAACAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR CCA 90 bp GTTTCTGTTCACAGGCCTCTGTCCAGGCTCCCGGCACCTTGTCGTTCCCGCGGACCCAGAACAGAGAAGTaGGTAAACTGCCTCGGACAC +
Preference number: 4 (lower is better)
Translates to: VSVHRPLSRLPAPCRSRGPRTEK*VNCLGH
Trigger: GTGTCCGAGGCAGTTTACCCACTTCTCTGTTCTGGG...TCCGCGGGAACGACAAGGTGCCGGGAGCCTGGACAGAGGCCTGTGAACAGAAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493803.5
CDS-3UTR TCA 90 bp TTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCGTGCCTAGGGAGCAGTaGCGGGTGATAGATGATGGA +
Preference number: 4 (lower is better)
Translates to: FRSFILPGRGTPHPAKGCVPREQ*RVIDDG
Trigger: TCCATCATCTATCACCCGTCACTGCTCCCTAGGCAC...GCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp CAGCCAAGGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGGTGCCTAGGGAGCAGTaGCGGGTGATAGATGATGGA +
Preference number: 4 (lower is better)
Translates to: QPRAASDWTEGVQDADMVVPREQ*RVIDDG
Trigger: TCCATCATCTATCACCCGTCACTGCTCCCTAGGCAC...CACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp TCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTGTGCCTAGGGAGCAGTaGCGGGTGATAGATGATGGA +
Preference number: 4 (lower is better)
Translates to: SEALFSLGGAHLTQPRAAVPREQ*RVIDDG
Trigger: TCCATCATCTATCACCCGTCACTGCTCCCTAGGCAC...AGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGGTGTTCAGCGTTGAGTTaGAAAATGTCAGTTTCTGTT +
Preference number: 4 (lower is better)
Translates to: VGGAVHPGSRGRGPQPRGCSALS*KMSVSV
Trigger: AACAGAAACTGACATTTTTCAACTCAACGCTGAACA...CCCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GGTGGGAGGTGCTGTGCACCCAGGCTCAAGAGGGAGGGGGCCCCAGCCACGAGGTGTTCAGCGTTGAGTTaGAAAATGTCAGTTTCTGTT +
Preference number: 4 (lower is better)
Translates to: GGRCCAPRLKREGAPATRCSALS*KMSVSV
Trigger: AACAGAAACTGACATTTTTCAACTCAACGCTGAACA...CCTCGTGGCTGGGGCCCCCTCCCTCTTGAGCCTGGGTGCACAGCACCTCCCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp CCCAAAGAGGATGAGTCCTGCTTTGGTGACCACCCCTGGCCGATGGGCTCCTGGTTGCCATCCTCCAGCTaGATATTCTTCACCAGCAGC +
Preference number: 4 (lower is better)
Translates to: PKEDESCFGDHPWPMGSWLPSSS*IFFTSS
Trigger: GCTGCTGGTGAAGAATATTCAGCTGGAGGATGGCAA...CCAGGAGCCCATCGGCCAGGGGTGGTCACCAAAGCAGGACTCATCCTCTTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR TCA 90 bp CAGCCAAGGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGCACAGACGCGGCCCCTaGCTTGAAGAAATCAGTGGA +
Preference number: 4 (lower is better)
Translates to: QPRAASDWTEGVQDADMVHRRGP*LEEISG
Trigger: TCCACTGATTTCTTCAAGTCAGGGGCCGCGTCTGTG...CACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp CTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGGCACAGACGCGGCCCCTaGCTTGAAGAAATCAGTGGA +
Preference number: 4 (lower is better)
Translates to: LLLTGQRASKMQTWCAGRHRRGP*LEEISG
Trigger: TCCACTGATTTCTTCAAGTCAGGGGCCGCGTCTGTG...CCTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTCACAGACGCGGCCCCTaGCTTGAAGAAATCAGTGGA +
Preference number: 4 (lower is better)
Translates to: EALFSLGGAHLTQPRAASHRRGP*LEEISG
Trigger: TCCACTGATTTCTTCAAGTCAGGGGCCGCGTCTGTG...AGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp TCCCGCGCACTGATCTTCCCCCACCGTCCATTCTCAAAGGCATCCTTGGCTGCGTTCCATCGGTGGGATTaGTGGTCTCAGAGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: SRALIFPHRPFSKASLAAFHRWD*WSQRSW
Trigger: CCAAGACCTCTGAGACCATCAATCCCACCGATGGAA...CGCAGCCAAGGATGCCTTTGAGAATGGACGGTGGGGGAAGATCAGTGCGCGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR TCA 90 bp TTTGATGCCTTCAGGGAAGAGGAAGCGGTTGTACAGCGTGCTCACGGTGTCGTCCCTTGTCGACGTCGGTaGCTTGGGCCAGGGATACCT +
Preference number: 4 (lower is better)
Translates to: FDAFREEEAVVQRAHGVVPCRRR*LGPGIP
Trigger: AGGTATCCCTGGCCCAAGTCACCGACGTCGACAAGG...GACGACACCGTGAGCACGCTGTACAACCGCTTCCTCTTCCCTGAAGGCATCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR TCA 90 bp TCTTCCACGTCTGTGAAAACAGTTGGCTCAAAGAAGAACCCTGGCCGAGGGACCTGGGTCTGGCCTGGTTaGTGGGGATGGTGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: SSTSVKTVGSKKNPGRGTWVWPG*WGWWSP
Trigger: AGGGCTCCACCATCCCCATCAACCAGGCCAGACCCA...GGTCCCTCGGCCAGGGTTCTTCTTTGAGCCAACTGTTTTCACAGACGTGGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR TCA 90 bp ATGTCCCTGGTGAAGACACCAGAAGCCAGGCCAAATTCCGTGGCATTGGCCCGACACATCAGGATGGTCTaGGAGTCTCTGGCCGACCAG +
Preference number: 4 (lower is better)
Translates to: MSLVKTPEARPNSVALARHIRMV*ESLADQ
Trigger: CTGGTCGGCCAGAGACTCTCAGACCATCCTGATGTG...TCGGGCCAATGCCACGGAATTTGGCCTGGCTTCTGGTGTCTTCACCAGGGACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR TCA 90 bp TCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTCACATCAGGATGGTCTaGGAGTCTCTGGCCGACCAG +
Preference number: 4 (lower is better)
Translates to: SSEALFSLGGAHLTQPRAHIRMV*ESLADQ
Trigger: CTGGTCGGCCAGAGACTCTCAGACCATCCTGATGTG...AGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCCCTCTGTGGAGCCTGTaGACCCGATTTTCCTCACAT +
Preference number: 4 (lower is better)
Translates to: GLLLTGQRASKMQTWCAGPLWSL*TRFSSH
Trigger: ATGTGAGGAAAATCGGGTTCACAGGCTCCACAGAGG...GCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp TTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGACTGGCCTCTGTGGAGCCTGTaGACCCGATTTTCCTCACAT +
Preference number: 4 (lower is better)
Translates to: LFSLGGAHLTQPRAASDWPLWSL*TRFSSH
Trigger: ATGTGAGGAAAATCGGGTTCACAGGCTCCACAGAGG...CCAGTCAGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTAAAGATGATGAGGGGTaGCTTCCCGCCCAGTTCCAG +
Preference number: 4 (lower is better)
Translates to: EALFSLGGAHLTQPRAASKDDEG*LPAQFQ
Trigger: CTGGAACTGGGCGGGAAGTCACCCCTCATCATCTTT...AGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp TTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGACTGGCAAATCCAGACTGTTTaGATCCTCCGAAGGGAGCGG +
Preference number: 4 (lower is better)
Translates to: LFSLGGAHLTQPRAASDWQIQTV*ILRRER
Trigger: CCGCTCCCTTCGGAGGATTCAAACAGTCTGGATTTG...CCAGTCAGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp TTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCCGAAGGTCACTGTCTTaGCCCGCAGGTACTCGTTCA +
Preference number: 4 (lower is better)
Translates to: FRSFILPGRGTPHPAKGCRRSLS*PAGTRS
Trigger: TGAACGAGTACCTGCGGGTCAAGACAGTGACCTTCG...GCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GCATTGGCCCGAGACAGCACGGCATCCAAGTCCCCATCAGCAAACCGAGAGATGCGAAGGTCACTGTCTTaGCCCGCAGGTACTCGTTCA +
Preference number: 4 (lower is better)
Translates to: ALARDSTASKSPSANREMRRSLS*PAGTRS
Trigger: TGAACGAGTACCTGCGGGTCAAGACAGTGACCTTCG...CATCTCTCGGTTTGCTGATGGGGACTTGGATGCCGTGCTGTCTCGGGCCAATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR TCA 90 bp GCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGCGAAGGTCACTGTCTTaGCCCGCAGGTACTCGTTCA +
Preference number: 4 (lower is better)
Translates to: AASDWTEGVQDADMVCRQRRSLS*PAGTRS
Trigger: TGAACGAGTACCTGCGGGTCAAGACAGTGACCTTCG...CTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp CCTGTGCTCAGGACCAGCCGGGTGGTCAGGGACAAATCAGGGTCAGTGTTCCTTCCTTTCTTATCTCCGTaGATGAGGGTCCCAGGGGGT +
Preference number: 4 (lower is better)
Translates to: PVLRTSRVVRDKSGSVFLPFLSP*MRVPGG
Trigger: ACCCCCTGGGACCCTCATTCACGGAGATAAGAAAGG...AAGGAACACTGACCCTGATTTGTCCCTGACCACCCGGCTGGTCCTGAGCACAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493803.5
CDS-3UTR GCA 90 bp TCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTAGGGTTGGAAGGACCTaGCATGTGCTACGGACACAG +
Preference number: 4 (lower is better)
Translates to: SEALFSLGGAHLTQPRAARVGRT*HVLRTQ
Trigger: CTGTGTCCGTAGCACATGGCAGGTCCTTCCAACCCT...AGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273450.7
CDS-3UTR GCA 90 bp GGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCCAAAGCCTGTCCTTTTaGACGCCACCGGGAGTACTT +
Preference number: 4 (lower is better)
Translates to: GLLLTGQRASKMQTWCAGQSLSF*TPPGVL
Trigger: AAGTACTCCCGGTGGCGTGCAAAAGGACAGGCTTTG...GCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp CTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGGGTTGTGAATGGCCTCTaGCGGCTGGTCCCAGTTGAT +
Preference number: 4 (lower is better)
Translates to: LLLTGQRASKMQTWCAGRVVNGL*RLVPVD
Trigger: ATCAACTGGGACCAGCCGGCAGAGGCCATTCACAAC...CCTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp CCAAATTCCGTGGCATTGGCCCGAGACAGCACGGCATCCAAGTCCCCATCAGCAGTTGTGAATGGCCTCTaGCGGCTGGTCCCAGTTGAT +
Preference number: 4 (lower is better)
Translates to: PNSVALARDSTASKSPSAVVNGL*RLVPVD
Trigger: ATCAACTGGGACCAGCCGGCAGAGGCCATTCACAAC...TGCTGATGGGGACTTGGATGCCGTGCTGTCTCGGGCCAATGCCACGGAATTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR GCA 90 bp GCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGGTTGTGAATGGCCTCTaGCGGCTGGTCCCAGTTGAT +
Preference number: 4 (lower is better)
Translates to: AASDWTEGVQDADMVCRQVVNGL*RLVPVD
Trigger: ATCAACTGGGACCAGCCGGCAGAGGCCATTCACAAC...CTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp CAGGATGGTCTGAGAGTCTCTGGCCGACCAGGGAGCCAGATCCTGGGAGGACGTAAGGACACTGCTGGCTaGCCCCTTAAAGAAGTTCGA +
Preference number: 4 (lower is better)
Translates to: QDGLRVSGRPGSQILGGRKDTAG*PLKEVR
Trigger: TCGAACTTCTTTAAGGGGGCAGCCAGCAGTGTCCTT...ACGTCCTCCCAGGATCTGGCTCCCTGGTCGGCCAGAGACTCTCAGACCATCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR GCA 90 bp GAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTCGCAGTAACCAGCTCTaGCTCTGTCAGCTCAAGGAC +
Preference number: 4 (lower is better)
Translates to: EALFSLGGAHLTQPRAASRSNQL*LCQLKD
Trigger: GTCCTTGAGCTGACAGAGGCAGAGCTGGTTACTGCG...AGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp TCTCCGCACGAACTCATCATGAATGGAGTCCTCCACAAAGAGTCGGCCTGCTGCTTGGGGAGGATCCGCTaGCAAACACTCCGCACAGCC +
Preference number: 4 (lower is better)
Translates to: SPHELIMNGVLHKESACCLGRIR*QTLRTA
Trigger: GGCTGTGCGGAGTGTTTGGCAGCGGATCCTCCCCAA...GCAGCAGGCCGACTCTTTGTGGAGGACTCCATTCATGATGAGTTCGTGCGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR GCA 90 bp TTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCCCACGTAGTCAATGCTaGACTCGCCCTCCTCATCGT +
Preference number: 4 (lower is better)
Translates to: FRSFILPGRGTPHPAKGCPRSQC*TRPPHR
Trigger: ACGATGAGGAGGGCGAGTGCAGCATTGACTACGTGG...GCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp AGTCTCTGGCCGACCAGGGAGCCAGATCCTGGGAGGACGTTAACCACACCTTTGCCACGTAGTCAATGCTaGACTCGCCCTCCTCATCGT +
Preference number: 4 (lower is better)
Translates to: SLWPTREPDPGRTLTTPLPRSQC*TRPPHR
Trigger: ACGATGAGGAGGGCGAGTGCAGCATTGACTACGTGG...CAAAGGTGTGGTTAACGTCCTCCCAGGATCTGGCTCCCTGGTCGGCCAGAGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR GCA 90 bp CTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGGCCACGTAGTCAATGCTaGACTCGCCCTCCTCATCGT +
Preference number: 4 (lower is better)
Translates to: LLLTGQRASKMQTWCAGRPRSQC*TRPPHR
Trigger: ACGATGAGGAGGGCGAGTGCAGCATTGACTACGTGG...CCTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp GAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGGGGCATGCGGACAGTaGGCTTGTTCACTGCCATTT +
Preference number: 4 (lower is better)
Translates to: EALFSLGGAHLTQPRAASGACGQ*ACSLPF
Trigger: AAATGGCAGTGAACAAGCGCACTGTCCGCATGCCCC...AGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp GCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGGGGGCATGCGGACAGTaGGCTTGTTCACTGCCATTT +
Preference number: 4 (lower is better)
Translates to: AASDWTEGVQDADMVCRQGACGQ*ACSLPF
Trigger: AAATGGCAGTGAACAAGCGCACTGTCCGCATGCCCC...CTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp CTCTCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGAGAGCTGGTGGGGCATaGGGACAGTGCGCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: LSSEALFSLGGAHLTQPRRAGGA*GQCACS
Trigger: TGAACAAGCGCACTGTCCGCATGCCCCACCAGCTCT...CCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp ATGCCGGCCTTTAATGTCAGCTCTGCAAACTTCAAGGCTGTGAGTGGGGTCACCCTTGGCTGCGGCCACTaGCTTGTCGACGTCGGTGAC +
Preference number: 4 (lower is better)
Translates to: MPAFNVSSANFKAVSGVTLGCGH*LVDVGD
Trigger: GTCACCGACGTCGACAAGGCAGTGGCCGCAGCCAAG...GGTGACCCCACTCACAGCCTTGAAGTTTGCAGAGCTGACATTAAAGGCCGGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR GCA 90 bp CTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGGAGCTCCTCCTGGTGCTaGTCCATGAGATCTGCCAAC +
Preference number: 4 (lower is better)
Translates to: LLLTGQRASKMQTWCAGRSSSWC*SMRSAN
Trigger: GTTGGCAGATCTCATGGAGCAGCACCAGGAGGAGCT...CCTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000472186.5
CDS-3UTR GCA 90 bp GAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTAGCTCCTCCTGGTGCTaGTCCATGAGATCTGCCAAC +
Preference number: 4 (lower is better)
Translates to: EALFSLGGAHLTQPRAASSSSWC*SMRSAN
Trigger: GTTGGCAGATCTCATGGAGCAGCACCAGGAGGAGCT...AGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000472186.5
CDS-3UTR GCA 90 bp GCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGAGCTCCTCCTGGTGCTaGTCCATGAGATCTGCCAAC +
Preference number: 4 (lower is better)
Translates to: AASDWTEGVQDADMVCRQSSSWC*SMRSAN
Trigger: GTTGGCAGATCTCATGGAGCAGCACCAGGAGGAGCT...CTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000472186.5
CDS-3UTR GCA 90 bp GTTGCCCACCTTCATCTTCCGCACCTCTTCTACCACTCTCCGCACGAACTCATCCCCTGTCCAGCGGGTTaGCCACCTTCATCTTCCGCA +
Preference number: 4 (lower is better)
Translates to: VAHLHLPHLFYHSPHELIPCPAG*PPSSSA
Trigger: TGCGGAAGATGAAGGTGGGCAACCCGCTGGACAGGG...GATGAGTTCGTGCGGAGAGTGGTAGAAGAGGTGCGGAAGATGAAGGTGGGCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR GCA 90 bp GCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGCCTTCCTTCACGCCATaGTGGCAGTACTCCATCAGC +
Preference number: 4 (lower is better)
Translates to: AASDWTEGVQDADMVCRQPSFTP*WQYSIS
Trigger: GCTGATGGAGTACTGCCAGCATGGCGTGAAGGAAGG...CTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp GAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTCCTTCCTTCACGCCATaGTGGCAGTACTCCATCAGC +
Preference number: 4 (lower is better)
Translates to: EALFSLGGAHLTQPRAASPSFTP*WQYSIS
Trigger: GCTGATGGAGTACTGCCAGCATGGCGTGAAGGAAGG...AGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp GTTTCTGTTCACAGGCCTCTGTCCAGGCTCCCGGCACCTTGTCGTTCCCGCGGAAGTGACCCACAGCCGTaGCCTTACCATTTTGTCATC +
Preference number: 4 (lower is better)
Translates to: VSVHRPLSRLPAPCRSRGSDPQP*PYHFVI
Trigger: GATGACAAAATGGTAAGGGCACGGCTGTGGGTCACT...TCCGCGGGAACGACAAGGTGCCGGGAGCCTGGACAGAGGCCTGTGAACAGAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493803.5
CDS-3UTR CCA 90 bp CGCAGACCAGTGTGGCCCCTTCCTTCACGCCATGCTGGCAGTACTCCATCAGCTTCGGCCCCCAAAGCCTaGTATTTTGCCACCACATCA +
Preference number: 4 (lower is better)
Translates to: RRPVWPLPSRHAGSTPSASAPKA*YFATTS
Trigger: TGATGTGGTGGCAAAATACCAGGCTTTGGGGGCCGA...AGCTGATGGAGTACTGCCAGCATGGCGTGAAGGAAGGGGCCACACTGGTCTGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp CAGCCAAGGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGGAATCCCCTCATAGGTaGCTCCTTCCTCAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: QPRAASDWTEGVQDADMVESPHR*LLPQAE
Trigger: CTCAGCCTGAGGAAGGAGCCACCTATGAGGGGATTC...CACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp TTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCGAATCCCCTCATAGGTaGCTCCTTCCTCAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: FRSFILPGRGTPHPAKGCESPHR*LLPQAE
Trigger: CTCAGCCTGAGGAAGGAGCCACCTATGAGGGGATTC...GCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp TCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTATGGCCTCTGCCGGCTaGTCCCAGTTGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: SSEALFSLGGAHLTQPRAMASAG*SQLILA
Trigger: AGCCAAGATCAACTGGGACCAGCCGGCAGAGGCCAT...AGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GTTGCCCACCTTCATCTTCCGCACCTCTTCTACCACTCTCCGCACGAACTCATCGGATCCAGTTGTGAATaGCCTCTGCCGGCTGGTCCC +
Preference number: 4 (lower is better)
Translates to: VAHLHLPHLFYHSPHELIGSSCE*PLPAGP
Trigger: GGGACCAGCCGGCAGAGGCCATTCACAACTGGATCC...GATGAGTTCGTGCGGAGAGTGGTAGAAGAGGTGCGGAAGATGAAGGTGGGCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp CGTGTTGACAAACACAGTGCCTGCCTGGAGCTTGTCACTGACATACAGGGCCTTTGGCCGATGGGCTCCTaGGATGGGCAAAGCGTCTCC +
Preference number: 4 (lower is better)
Translates to: RVDKHSACLELVTDIQGLWPMGS*DGQSVS
Trigger: GGAGACGCTTTGCCCATCCCAGGAGCCCATCGGCCA...AAGGCCCTGTATGTCAGTGACAAGCTCCAGGCAGGCACTGTGTTTGTCAACACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp TTGTCATCATTCCCAAAGAGGATGAGTCCTGCTTTGGTGACCACCCCTGGCCGAACCACCCCTGGCCGATaGGCTCCTGGGATGGGCAAA +
Preference number: 4 (lower is better)
Translates to: LSSFPKRMSPALVTTPGRTTPGR*APGMGK
Trigger: TTTGCCCATCCCAGGAGCCCATCGGCCAGGGGTGGT...TCGGCCAGGGGTGGTCACCAAAGCAGGACTCATCCTCTTTGGGAATGATGACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000493803.5
CDS-3UTR CCA 90 bp AAGGGTAGGGAGCCCAGCTTTCCCAGAACAGAGAAGTGGGTAAACTGCCTCGGATTTGGTGACCACCCCTaGCCGATGGGCTCCTGGGAT +
Preference number: 4 (lower is better)
Translates to: KGREPSFPRTEKWVNCLGFGDHP*PMGSWD
Trigger: ATCCCAGGAGCCCATCGGCCAGGGGTGGTCACCAAA...TCCGAGGCAGTTTACCCACTTCTCTGTTCTGGGAAAGCTGGGCTCCCTACCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493803.5
CDS-3UTR CCA 90 bp TCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTCAACCTCCAGGACTTTaGGGAGGATCCGCTGCCAAA +
Preference number: 4 (lower is better)
Translates to: SEALFSLGGAHLTQPRAAQPPGL*GGSAAK
Trigger: TTTGGCAGCGGATCCTCCCCAAAGTCCTGGAGGTTG...AGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp TCAGGCAAAGCCTGTCCTTTTGCACGCCACCGGGAGTACTTGAATACCGGCACTCCAATGAAGAGCTGGTaGGGCATGCGGACAGTGCGC +
Preference number: 4 (lower is better)
Translates to: SGKACPFARHREYLNTGTPMKSW*GMRTVR
Trigger: GCGCACTGTCCGCATGCCCCACCAGCTCTTCATTGG...AGTGCCGGTATTCAAGTACTCCCGGTGGCGTGCAAAAGGACAGGCTTTGCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR CCA 90 bp GGTGACTTGGGCCAGGGATACCTGGCAGATGACACTTCCATCGGTGGGATTGATCCCCCAATGAAGAGCTaGTGGGGCATGCGGACAGTG +
Preference number: 4 (lower is better)
Translates to: GDLGQGYLADDTSIGGIDPPMKS*WGMRTV
Trigger: CACTGTCCGCATGCCCCACCAGCTCTTCATTGGGGG...ATCAATCCCACCGATGGAAGTGTCATCTGCCAGGTATCCCTGGCCCAAGTCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR CCA 90 bp GAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTTGGGCCAGGGATACCTaGCAGATGACACTTCCATCG +
Preference number: 4 (lower is better)
Translates to: EALFSLGGAHLTQPRAASWARDT*QMTLPS
Trigger: CGATGGAAGTGTCATCTGCCAGGTATCCCTGGCCCA...AGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp CAGCCAAGGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGGGCCAGGGATACCTaGCAGATGACACTTCCATCG +
Preference number: 4 (lower is better)
Translates to: QPRAASDWTEGVQDADMVWARDT*QMTLPS
Trigger: CGATGGAAGTGTCATCTGCCAGGTATCCCTGGCCCA...CACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGTGGGCCAGGGATACCTaGCAGATGACACTTCCATCG +
Preference number: 4 (lower is better)
Translates to: AASDWTEGVQDADMVCRQWARDT*QMTLPS
Trigger: CGATGGAAGTGTCATCTGCCAGGTATCCCTGGCCCA...CTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp CTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGGTGGGCCAGGGATACCTaGCAGATGACACTTCCATCG +
Preference number: 4 (lower is better)
Translates to: LLLTGQRASKMQTWCAGRWARDT*QMTLPS
Trigger: CGATGGAAGTGTCATCTGCCAGGTATCCCTGGCCCA...CCTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp TTTGATGCCTTCAGGGAAGAGGAAGCGGTTGTACAGCGTGCTCACGGTGTCGTCTCGACGTCGGTGACTTaGGCCAGGGATACCTGGCAG +
Preference number: 4 (lower is better)
Translates to: FDAFREEEAVVQRAHGVVSTSVT*ARDTWQ
Trigger: CTGCCAGGTATCCCTGGCCCAAGTCACCGACGTCGA...GACGACACCGTGAGCACGCTGTACAACCGCTTCCTCTTCCCTGAAGGCATCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR CCA 90 bp TTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTCTCAAAGGCATCCTTaGCTGCGGCCACTGCCTTGT +
Preference number: 4 (lower is better)
Translates to: FRSFILPGRGTPHPAKGCSQRHP*LRPLPC
Trigger: ACAAGGCAGTGGCCGCAGCCAAGGATGCCTTTGAGA...GCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp CAGCCAAGGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTCTCAAAGGCATCCTTaGCTGCGGCCACTGCCTTGT +
Preference number: 4 (lower is better)
Translates to: QPRAASDWTEGVQDADMVSQRHP*LRPLPC
Trigger: ACAAGGCAGTGGCCGCAGCCAAGGATGCCTTTGAGA...CACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp CTCTCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGAGCGGAAGGTCTGGATaGACATGCCCACGTGGGTCT +
Preference number: 4 (lower is better)
Translates to: LSSEALFSLGGAHLTQPRSGRSG*TCPRGS
Trigger: AGACCCACGTGGGCATGTCCATCCAGACCTTCCGCT...CCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000472186.5
CDS-3UTR CCA 90 bp CAGCCAAGGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGCTTCAAGGCTGTGAGTaGGGTCACCTGAGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: QPRAASDWTEGVQDADMVLQGCE*GHLSRL
Trigger: AAGCCTGCTCAGGTGACCCCACTCACAGCCTTGAAG...CACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp CTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGGCTTCAAGGCTGTGAGTaGGGTCACCTGAGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: LLLTGQRASKMQTWCAGRLQGCE*GHLSRL
Trigger: AAGCCTGCTCAGGTGACCCCACTCACAGCCTTGAAG...CCTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp CTCTCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGCAGGGAGCCAGATCCTaGGAGGACGTTAACCACACC +
Preference number: 4 (lower is better)
Translates to: LSSEALFSLGGAHLTQPRQGARS*EDVNHT
Trigger: GGTGTGGTTAACGTCCTCCCAGGATCTGGCTCCCTG...CCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCTCCTTCACGCCATGCTaGCAGTACTCCATCAGCTTC +
Preference number: 4 (lower is better)
Translates to: GLLLTGQRASKMQTWCAGSFTPC*QYSISF
Trigger: GAAGCTGATGGAGTACTGCCAGCATGGCGTGAAGGA...GCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp TCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTCTCAAAGAAGAACCCTaGCCGAGGGACCTGATTCCC +
Preference number: 4 (lower is better)
Translates to: SEALFSLGGAHLTQPRAALKEEP*PRDLIP
Trigger: GGGAATCAGGTCCCTCGGCCAGGGTTCTTCTTTGAG...AGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGCTCAAAGAAGAACCCTaGCCGAGGGACCTGATTCCC +
Preference number: 4 (lower is better)
Translates to: AASDWTEGVQDADMVCRQLKEEP*PRDLIP
Trigger: GGGAATCAGGTCCCTCGGCCAGGGTTCTTCTTTGAG...CTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp CTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGGCAAATTCCGTGGCATTaGCCCGAGACAGCACGGCAT +
Preference number: 4 (lower is better)
Translates to: LLLTGQRASKMQTWCAGRQIPWH*PETARH
Trigger: ATGCCGTGCTGTCTCGGGCCAATGCCACGGAATTTG...CCTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GTGTCCCTGTCCAGCGGGTTGCCCACCTTCATCTTCCGCACCTCTTCTACCACTCAAATTCCGTGGCATTaGCCCGAGACAGCACGGCAT +
Preference number: 4 (lower is better)
Translates to: VSLSSGLPTFIFRTSSTTQIPWH*PETARH
Trigger: ATGCCGTGCTGTCTCGGGCCAATGCCACGGAATTTG...AGTGGTAGAAGAGGTGCGGAAGATGAAGGTGGGCAACCCGCTGGACAGGGACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp TTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCCAAATTCCGTGGCATTaGCCCGAGACAGCACGGCAT +
Preference number: 4 (lower is better)
Translates to: FRSFILPGRGTPHPAKGCQIPWH*PETARH
Trigger: ATGCCGTGCTGTCTCGGGCCAATGCCACGGAATTTG...GCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp AGTCTCTGGCCGACCAGGGAGCCAGATCCTGGGAGGACGTTAACCACACCTTTGTCCAAGATGCAGACATaGTGTGCAGGCAGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: SLWPTREPDPGRTLTTPLSKMQT*CAGRRA
Trigger: AGCCCTCCTGCCTGCACACCATGTCTGCATCTTGGA...CAAAGGTGTGGTTAACGTCCTCCCAGGATCTGGCTCCCTGGTCGGCCAGAGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp GAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTTCCAAGATGCAGACATaGTGTGCAGGCAGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: EALFSLGGAHLTQPRAASSKMQT*CAGRRA
Trigger: AGCCCTCCTGCCTGCACACCATGTCTGCATCTTGGA...AGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp TCCCTGGTGAAGACACCAGAAGCCAGGCCAAATTCCGTGGCATTGGCCCGAGACAGGGCTGCTTCTGACTaGACAGAGGGCGTCCAAGAT +
Preference number: 4 (lower is better)
Translates to: SLVKTPEARPNSVALARDRAASD*TEGVQD
Trigger: ATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCT...GTCTCGGGCCAATGCCACGGAATTTGGCCTGGCTTCTGGTGTCTTCACCAGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp TCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTAGGGCTGCTTCTGACTaGACAGAGGGCGTCCAAGAT +
Preference number: 4 (lower is better)
Translates to: SEALFSLGGAHLTQPRAARAASD*TEGVQD
Trigger: ATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCT...AGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTAAGCTTTATTCTCCCTaGGAGGGGCACACCTCACCC +
Preference number: 4 (lower is better)
Translates to: EALFSLGGAHLTQPRAASKLYSP*EGHTSP
Trigger: GGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTT...AGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp CTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGGAAGCTTTATTCTCCCTaGGAGGGGCACACCTCACCC +
Preference number: 4 (lower is better)
Translates to: LLLTGQRASKMQTWCAGRKLYSP*EGHTSP
Trigger: GGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTT...CCTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGAAGCTTTATTCTCCCTaGGAGGGGCACACCTCACCC +
Preference number: 4 (lower is better)
Translates to: AASDWTEGVQDADMVCRQKLYSP*EGHTSP
Trigger: GGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTT...CTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp TTCCCAAAGAGGATGAGTCCTGCTTTGGTGACCACCCCTGGCCGATGGGCTCCTCCAAGGACAGGAGCATaGGTGGCTTTGAGCAGGCAA +
Preference number: 4 (lower is better)
Translates to: FPKRMSPALVTTPGRWAPPRTGA*VALSRQ
Trigger: TTGCCTGCTCAAAGCCACCCATGCTCCTGTCCTTGG...AGGAGCCCATCGGCCAGGGGTGGTCACCAAAGCAGGACTCATCCTCTTTGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493803.5
3UTR CAA 72 bp GTGAAGACACCAGAAGCCAGGCCAAATTCCGTGGCATaGGCCCGAGACAGCACGGCATCCAAGTCCCCATCA +
Preference number: 4 (lower is better)
Translates to: VKTPEARPNSVA*ARDSTASKSPS
Trigger: TGATGGGGACTTGGATGCCGTGCTGTCTCGGGCCAATGCCACGGAATTTGGCCTGGCTTCTGGTGTCTTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR TCA 90 bp GCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGCCTTGTCTGGAACAGTaGACACACCCACCACTTCGT +
Preference number: 4 (lower is better)
Translates to: AASDWTEGVQDADMVCRQPCLEQ*THPPLR
Trigger: ACGAAGTGGTGGGTGTGTTCACTGTTCCAGACAAGG...CTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTCCTTGTCTGGAACAGTaGACACACCCACCACTTCGT +
Preference number: 4 (lower is better)
Translates to: EALFSLGGAHLTQPRAASPCLEQ*THPPLR
Trigger: ACGAAGTGGTGGGTGTGTTCACTGTTCCAGACAAGG...AGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp TCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGTGCCTAGGGAGCAGTaGCGGGTGATAGATGATGGA +
Preference number: 4 (lower is better)
Translates to: SSEALFSLGGAHLTQPRAVPREQ*RVIDDG
Trigger: TCCATCATCTATCACCCGTCACTGCTCCCTAGGCAC...AGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GGACTCCTCCTTGGCTATGAACATGTGGTCTTCCACGTCTGTGAAAACAGTTGGCCGCGGATCCAGTTGTaGATGGCCTCTGCCGGCTGG +
Preference number: 4 (lower is better)
Translates to: GLLLGYEHVVFHVCENSWPRIQL*MASAGW
Trigger: CCAGCCGGCAGAGGCCATTCACAACTGGATCCGCGG...CCAACTGTTTTCACAGACGTGGAAGACCACATGTTCATAGCCAAGGAGGAGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR TCA 90 bp GAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTACGCGGCCCCTGACTTaGAGAAATCAGTGGAGTCTT +
Preference number: 4 (lower is better)
Translates to: EALFSLGGAHLTQPRAASTRPLT*RNQWSL
Trigger: AAGACTCCACTGATTTCTTCAAGTCAGGGGCCGCGT...AGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp CTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGGACGCGGCCCCTGACTTaGAGAAATCAGTGGAGTCTT +
Preference number: 4 (lower is better)
Translates to: LLLTGQRASKMQTWCAGRTRPLT*RNQWSL
Trigger: AAGACTCCACTGATTTCTTCAAGTCAGGGGCCGCGT...CCTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGTTCCATCGGTGGGATTaGTGGTCTCAGAGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: AASDWTEGVQDADMVCRQFHRWD*WSQRSW
Trigger: CCAAGACCTCTGAGACCATCAATCCCACCGATGGAA...CTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTTTCCATCGGTGGGATTaGTGGTCTCAGAGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: EALFSLGGAHLTQPRAASFHRWD*WSQRSW
Trigger: CCAAGACCTCTGAGACCATCAATCCCACCGATGGAA...AGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GGCCCGAAGGACTCCTCCTTGGCTATGAACATGTGGTCTTCCACGTCTGTGAAACCTTGTCGACGTCGGTaGCTTGGGCCAGGGATACCT +
Preference number: 4 (lower is better)
Translates to: GPKDSSLAMNMWSSTSVKPCRRR*LGPGIP
Trigger: AGGTATCCCTGGCCCAAGTCACCGACGTCGACAAGG...TTTCACAGACGTGGAAGACCACATGTTCATAGCCAAGGAGGAGTCCTTCGGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR TCA 90 bp CTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGGCCTCTGTGGAGCCTGTaGACCCGATTTTCCTCACAT +
Preference number: 4 (lower is better)
Translates to: LLLTGQRASKMQTWCAGRPLWSL*TRFSSH
Trigger: ATGTGAGGAAAATCGGGTTCACAGGCTCCACAGAGG...CCTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp CTCTCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGAAAGATGATGAGGGGTaGCTTCCCGCCCAGTTCCAG +
Preference number: 4 (lower is better)
Translates to: LSSEALFSLGGAHLTQPRKDDEG*LPAQFQ
Trigger: CTGGAACTGGGCGGGAAGTCACCCCTCATCATCTTT...CCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp TCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTAAAGATGATGAGGGGTaGCTTCCCGCCCAGTTCCAG +
Preference number: 4 (lower is better)
Translates to: SSEALFSLGGAHLTQPRAKDDEG*LPAQFQ
Trigger: CTGGAACTGGGCGGGAAGTCACCCCTCATCATCTTT...AGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp CCATCAGCTTCACAAGGTGGGCATGGTGATTCTGCGGCCCGTGGTCGGTGTCCCTCTTGTTGTACGTGTTaGCAAACACAGTGCCTGCCT +
Preference number: 4 (lower is better)
Translates to: PSASQGGHGDSAARGRCPSCCTC*QTQCLP
Trigger: AGGCAGGCACTGTGTTTGTCAACACGTACAACAAGA...GGGACACCGACCACGGGCCGCAGAATCACCATGCCCACCTTGTGAAGCTGATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR TCA 90 bp GCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGCAAATCCAGACTGTTTaGATCCTCCGAAGGGAGCGG +
Preference number: 4 (lower is better)
Translates to: AASDWTEGVQDADMVCRQQIQTV*ILRRER
Trigger: CCGCTCCCTTCGGAGGATTCAAACAGTCTGGATTTG...CTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp CTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGGCAAAGCCTGTCCTTTTaGACGCCACCGGGAGTACTT +
Preference number: 4 (lower is better)
Translates to: LLLTGQRASKMQTWCAGRQSLSF*TPPGVL
Trigger: AAGTACTCCCGGTGGCGTGCAAAAGGACAGGCTTTG...CCTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp GCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGCAAAGCCTGTCCTTTTaGACGCCACCGGGAGTACTT +
Preference number: 4 (lower is better)
Translates to: AASDWTEGVQDADMVCRQQSLSF*TPPGVL
Trigger: AAGTACTCCCGGTGGCGTGCAAAAGGACAGGCTTTG...CTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp GAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTCAAAGCCTGTCCTTTTaGACGCCACCGGGAGTACTT +
Preference number: 4 (lower is better)
Translates to: EALFSLGGAHLTQPRAASQSLSF*TPPGVL
Trigger: AAGTACTCCCGGTGGCGTGCAAAAGGACAGGCTTTG...AGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp TCCGCACCTCTTCTACCACTCTCCGCACGAACTCATCATGAATGGAGTCCTCCAAGCGGTTGTACAGCGTaGTCACGGTGTCGTCCGGGA +
Preference number: 4 (lower is better)
Translates to: SAPLLPLSARTHHEWSPPSGCTA*SRCRPG
Trigger: TCCCGGACGACACCGTGAGCACGCTGTACAACCGCT...TGGAGGACTCCATTCATGATGAGTTCGTGCGGAGAGTGGTAGAAGAGGTGCGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR GCA 90 bp TTGTCATCATTCCCAAAGAGGATGAGTCCTGCTTTGGTGACCACCCCTGGCCGAAGCGGTTGTACAGCGTaGTCACGGTGTCGTCCGGGA +
Preference number: 4 (lower is better)
Translates to: LSSFPKRMSPALVTTPGRSGCTA*SRCRPG
Trigger: TCCCGGACGACACCGTGAGCACGCTGTACAACCGCT...TCGGCCAGGGGTGGTCACCAAAGCAGGACTCATCCTCTTTGGGAATGATGACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000493803.5
CDS-3UTR GCA 90 bp AATGGCCTCTGCCGGCTGGTCCCAGTTGATCTTGGCTGTCTCCTTCTTCTGAATGGAGTCTGGGGGCTTTaGCCTCAGCGATCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: NGLCRLVPVDLGCLLLLNGVWGL*PQRSAS
Trigger: TGAGGCTGATCGCTGAGGGCAAAGCCCCCAGACTCC...ATTCAGAAGAAGGAGACAGCCAAGATCAACTGGGACCAGCCGGCAGAGGCCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000493803.5
CDS-3UTR GCA 90 bp CTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGGAAAGAGGATGAGTCCTaGTTTGGTGACCACCCCTGG +
Preference number: 4 (lower is better)
Translates to: LLLTGQRASKMQTWCAGRKEDES*FGDHPW
Trigger: CCAGGGGTGGTCACCAAAGCAGGACTCATCCTCTTT...CCTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp CGATTTTCCTCACATCAGGATGGTCTGAGAGTCTCTGGCCGACCAGGGAGCCAGCCACGTAGTCAATGCTaGACTCGCCCTCCTCATCGT +
Preference number: 4 (lower is better)
Translates to: RFSSHQDGLRVSGRPGSQPRSQC*TRPPHR
Trigger: ACGATGAGGAGGGCGAGTGCAGCATTGACTACGTGG...CTGGCTCCCTGGTCGGCCAGAGACTCTCAGACCATCCTGATGTGAGGAAAATCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR GCA 90 bp TTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGACTGGTTTCCACGTAGTCAATaGTGCACTCGCCCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: LFSLGGAHLTQPRAASDWFPRSQ*CTRPPH
Trigger: ATGAGGAGGGCGAGTGCAGCATTGACTACGTGGAAA...CCAGTCAGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp GGTGACTTGGGCCAGGGATACCTGGCAGATGACACTTCCATCGGTGGGATTGATAGAGCTGGTGGGGCATaGGGACAGTGCGCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: GDLGQGYLADDTSIGGIDRAGGA*GQCACS
Trigger: TGAACAAGCGCACTGTCCGCATGCCCCACCAGCTCT...ATCAATCCCACCGATGGAAGTGTCATCTGCCAGGTATCCCTGGCCCAAGTCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR GCA 90 bp GCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGCTGCTCCATGAGATCTaGCAACCTGTACATCAGCCG +
Preference number: 4 (lower is better)
Translates to: AASDWTEGVQDADMVCRQLLHEI*QPVHQP
Trigger: CGGCTGATGTACAGGTTGGCAGATCTCATGGAGCAG...CTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000472186.5
CDS-3UTR GCA 90 bp TCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTCTGCTCCATGAGATCTaGCAACCTGTACATCAGCCG +
Preference number: 4 (lower is better)
Translates to: SEALFSLGGAHLTQPRAALLHEI*QPVHQP
Trigger: CGGCTGATGTACAGGTTGGCAGATCTCATGGAGCAG...AGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000472186.5
CDS-3UTR GCA 90 bp TTCCACGTCTGTGAAAACAGTTGGCTCAAAGAAGAACCCTGGCCGAGGGACCTGCCCTGTCCAGCGGGTTaGCCACCTTCATCTTCCGCA +
Preference number: 4 (lower is better)
Translates to: FHVCENSWLKEEPWPRDLPCPAG*PPSSSA
Trigger: TGCGGAAGATGAAGGTGGGCAACCCGCTGGACAGGG...CAGGTCCCTCGGCCAGGGTTCTTCTTTGAGCCAACTGTTTTCACAGACGTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR GCA 90 bp GTGTCCCTGTCCAGCGGGTTGCCCACCTTCATCTTCCGCACCTCTTCTACCACTGACAAACACAGTGCCTaGCTGGAGCTTGTCACTGAC +
Preference number: 4 (lower is better)
Translates to: VSLSSGLPTFIFRTSSTTDKHSA*LELVTD
Trigger: GTCAGTGACAAGCTCCAGGCAGGCACTGTGTTTGTC...AGTGGTAGAAGAGGTGCGGAAGATGAAGGTGGGCAACCCGCTGGACAGGGACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR GCA 90 bp CTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGGGACAAACACAGTGCCTaGCTGGAGCTTGTCACTGAC +
Preference number: 4 (lower is better)
Translates to: LLLTGQRASKMQTWCAGRDKHSA*LELVTD
Trigger: GTCAGTGACAAGCTCCAGGCAGGCACTGTGTTTGTC...CCTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp TCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTGACAAACACAGTGCCTaGCTGGAGCTTGTCACTGAC +
Preference number: 4 (lower is better)
Translates to: SEALFSLGGAHLTQPRAADKHSA*LELVTD
Trigger: GTCAGTGACAAGCTCCAGGCAGGCACTGTGTTTGTC...AGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp TCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTCCCCTTTTCATGATGTaGTTGCCCACCTCTGTGGAG +
Preference number: 4 (lower is better)
Translates to: SEALFSLGGAHLTQPRAAPLFMM*LPTSVE
Trigger: CTCCACAGAGGTGGGCAAGCACATCATGAAAAGGGG...AGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393431.6
CDS-3UTR GCA 90 bp TCCGTGGCATTGGCCCGAGACAGCACGGCATCCAAGTCCCCATCAGCAAACCGAGGGCGGGTCTATAAATaGCATGTAAAAGCCAACCCC +
Preference number: 4 (lower is better)
Translates to: SVALARDSTASKSPSANRGRVYK*HVKANP
Trigger: GGGGTTGGCTTTTACATGGCATTTATAGACCCGCCC...TCGGTTTGCTGATGGGGACTTGGATGCCGTGCTGTCTCGGGCCAATGCCACGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455064.6
CDS-3UTR CCA 90 bp GAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTTCGGCCCCCAAAGCCTaGTATTTTGCCACCACATCA +
Preference number: 4 (lower is better)
Translates to: EALFSLGGAHLTQPRAASSAPKA*YFATTS
Trigger: TGATGTGGTGGCAAAATACCAGGCTTTGGGGGCCGA...AGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp TCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCGGCCCCCAAAGCCTaGTATTTTGCCACCACATCA +
Preference number: 4 (lower is better)
Translates to: SEALFSLGGAHLTQPRAASAPKA*YFATTS
Trigger: TGATGTGGTGGCAAAATACCAGGCTTTGGGGGCCGA...AGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp CAGCCAAGGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTCGGCCCCCAAAGCCTaGTATTTTGCCACCACATCA +
Preference number: 4 (lower is better)
Translates to: QPRAASDWTEGVQDADMVSAPKA*YFATTS
Trigger: TGATGTGGTGGCAAAATACCAGGCTTTGGGGGCCGA...CACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp CTCTCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGAATCCCCTCATAGGTaGCTCCTTCCTCAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: LSSEALFSLGGAHLTQPRESPHR*LLPQAE
Trigger: CTCAGCCTGAGGAAGGAGCCACCTATGAGGGGATTC...CCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GGCCCGAAGGACTCCTCCTTGGCTATGAACATGTGGTCTTCCACGTCTGTGAAAGGATCCAGTTGTGAATaGCCTCTGCCGGCTGGTCCC +
Preference number: 4 (lower is better)
Translates to: GPKDSSLAMNMWSSTSVKGSSCE*PLPAGP
Trigger: GGGACCAGCCGGCAGAGGCCATTCACAACTGGATCC...TTTCACAGACGTGGAAGACCACATGTTCATAGCCAAGGAGGAGTCCTTCGGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp CCTGCAGTCGCTGTCCCCAATAACTTTGGGCTCTCTGCCTTCCACTCTTCAATATGGCCGATGGGCTCCTaGGATGGGCAAAGCGTCTCC +
Preference number: 4 (lower is better)
Translates to: PAVAVPNNFGLSAFHSSIWPMGS*DGQSVS
Trigger: GGAGACGCTTTGCCCATCCCAGGAGCCCATCGGCCA...TATTGAAGAGTGGAAGGCAGAGAGCCCAAAGTTATTGGGGACAGCGACTGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR CCA 90 bp ACAAACACAGTGCCTGCCTGGAGCTTGTCACTGACATACAGGGCCTTGTTGATGACCACCCCTGGCCGATaGGCTCCTGGGATGGGCAAA +
Preference number: 4 (lower is better)
Translates to: TNTVPAWSLSLTYRALLMTTPGR*APGMGK
Trigger: TTTGCCCATCCCAGGAGCCCATCGGCCAGGGGTGGT...CATCAACAAGGCCCTGTATGTCAGTGACAAGCTCCAGGCAGGCACTGTGTTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp TCCGCACCTCTTCTACCACTCTCCGCACGAACTCATCATGAATGGAGTCCTCCATTTGGTGACCACCCCTaGCCGATGGGCTCCTGGGAT +
Preference number: 4 (lower is better)
Translates to: SAPLLPLSARTHHEWSPPFGDHP*PMGSWD
Trigger: ATCCCAGGAGCCCATCGGCCAGGGGTGGTCACCAAA...TGGAGGACTCCATTCATGATGAGTTCGTGCGGAGAGTGGTAGAAGAGGTGCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp CTCTCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGCAACCTCCAGGACTTTaGGGAGGATCCGCTGCCAAA +
Preference number: 4 (lower is better)
Translates to: LSSEALFSLGGAHLTQPRQPPGL*GGSAAK
Trigger: TTTGGCAGCGGATCCTCCCCAAAGTCCTGGAGGTTG...CCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp CCTTCTCAGCTTCCAGACAGTGGCAGCTGCTTCCTGCAGTCGCTGTCCCCAATACAACCTCCAGGACTTTaGGGAGGATCCGCTGCCAAA +
Preference number: 4 (lower is better)
Translates to: PSQLPDSGSCFLQSLSPIQPPGL*GGSAAK
Trigger: TTTGGCAGCGGATCCTCCCCAAAGTCCTGGAGGTTG...TATTGGGGACAGCGACTGCAGGAAGCAGCTGCCACTGTCTGGAAGCTGAGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR CCA 90 bp GTCTTCCACGTCTGTGAAAACAGTTGGCTCAAAGAAGAACCCTGGCCGAGGGACCCAATGAAGAGCTGGTaGGGCATGCGGACAGTGCGC +
Preference number: 4 (lower is better)
Translates to: VFHVCENSWLKEEPWPRDPMKSW*GMRTVR
Trigger: GCGCACTGTCCGCATGCCCCACCAGCTCTTCATTGG...GTCCCTCGGCCAGGGTTCTTCTTTGAGCCAACTGTTTTCACAGACGTGGAAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp CGTGTTGACAAACACAGTGCCTGCCTGGAGCTTGTCACTGACATACAGGGCCTTTCGACGTCGGTGACTTaGGCCAGGGATACCTGGCAG +
Preference number: 4 (lower is better)
Translates to: RVDKHSACLELVTDIQGLSTSVT*ARDTWQ
Trigger: CTGCCAGGTATCCCTGGCCCAAGTCACCGACGTCGA...AAGGCCCTGTATGTCAGTGACAAGCTCCAGGCAGGCACTGTGTTTGTCAACACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp TTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTCCTTCACGCCATGCTaGCAGTACTCCATCAGCTTC +
Preference number: 4 (lower is better)
Translates to: FRSFILPGRGTPHPAKGCSFTPC*QYSISF
Trigger: GAAGCTGATGGAGTACTGCCAGCATGGCGTGAAGGA...GCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GGGGTGACTTCCCGCCCAGTTCCAGGGACACCTTCTTCACGTTACTTATGGCACCTCAAAGAAGAACCCTaGCCGAGGGACCTGATTCCC +
Preference number: 4 (lower is better)
Translates to: GVTSRPVPGTPSSRYLWHLKEEP*PRDLIP
Trigger: GGGAATCAGGTCCCTCGGCCAGGGTTCTTCTTTGAG...GTGCCATAAGTAACGTGAAGAAGGTGTCCCTGGAACTGGGCGGGAAGTCACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455064.6
CDS-3UTR CCA 90 bp TCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTCAAATTCCGTGGCATTaGCCCGAGACAGCACGGCAT +
Preference number: 4 (lower is better)
Translates to: SSEALFSLGGAHLTQPRAQIPWH*PETARH
Trigger: ATGCCGTGCTGTCTCGGGCCAATGCCACGGAATTTG...AGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp TTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGACTGGAACACAGTGCCTGCCTaGAGCTTGTCACTGACATAC +
Preference number: 4 (lower is better)
Translates to: LFSLGGAHLTQPRAASDWNTVPA*SLSLTY
Trigger: GTATGTCAGTGACAAGCTCCAGGCAGGCACTGTGTT...CCAGTCAGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp TCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTAGGGCTGCTTCTGACTaGACAGAGGGCGTCCAAGAT +
Preference number: 4 (lower is better)
Translates to: SSEALFSLGGAHLTQPRARAASD*TEGVQD
Trigger: ATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCT...AGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp CTCTCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGAAGCTTTATTCTCCCTaGGAGGGGCACACCTCACCC +
Preference number: 4 (lower is better)
Translates to: LSSEALFSLGGAHLTQPRKLYSP*EGHTSP
Trigger: GGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTT...CCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
3UTR CAA 72 bp TTGAATCCTCCGAAGGGAGCGGCCACGTCGGTCTTGTaGTACGTGTTGACAAACACAGTGCCTGCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: LNPPKGAATSVL*YVLTNTVPAWS
Trigger: GCTCCAGGCAGGCACTGTGTTTGTCAACACGTACAACAAGACCGACGTGGCCGCTCCCTTCGGAGGATTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR TCA 90 bp CTCTCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGCCTTGTCTGGAACAGTaGACACACCCACCACTTCGT +
Preference number: 4 (lower is better)
Translates to: LSSEALFSLGGAHLTQPRPCLEQ*THPPLR
Trigger: ACGAAGTGGTGGGTGTGTTCACTGTTCCAGACAAGG...CCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp CAGCCAAGGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTTATCTCCATGGGGATaGATTGGCTGCAGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: QPRAASDWTEGVQDADMVLSPWG*IGCRRA
Trigger: TGCCCTTCTGCAGCCAATTCATCCCCATGGAGATAA...CACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp TCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTTATCTCCATGGGGATaGATTGGCTGCAGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: SEALFSLGGAHLTQPRAALSPWG*IGCRRA
Trigger: TGCCCTTCTGCAGCCAATTCATCCCCATGGAGATAA...AGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp TTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTATCTCCATGGGGATaGATTGGCTGCAGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: FRSFILPGRGTPHPAKGCLSPWG*IGCRRA
Trigger: TGCCCTTCTGCAGCCAATTCATCCCCATGGAGATAA...GCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp CGGTGTCCCTGTCCAGCGGGTTGCCCACCTTCATCTTCCGCACCTCTTCTACCACCTTTCTTATCTCCGTaGATGAGGGTCCAGTTGATG +
Preference number: 4 (lower is better)
Translates to: RCPCPAGCPPSSSAPLLPPFLSP*MRVQLM
Trigger: CATCAACTGGACCCTCATTCACGGAGATAAGAAAGG...TGGTAGAAGAGGTGCGGAAGATGAAGGTGGGCAACCCGCTGGACAGGGACACCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR TCA 90 bp TTCCACGTCTGTGAAAACAGTTGGCTCAAAGAAGAACCCTGGCCGAGGGACCTGCCGGCTGGTCCCAGTTaGTCTTGGCTGTCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: FHVCENSWLKEEPWPRDLPAGPS*SWLSPS
Trigger: AGAAGGAGACAGCCAAGATCAACTGGGACCAGCCGG...CAGGTCCCTCGGCCAGGGTTCTTCTTTGAGCCAACTGTTTTCACAGACGTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR TCA 90 bp CTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGGTTGCCATCCTCCAGCTaGATATTCTTCACCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LLLTGQRASKMQTWCAGRLPSSS*IFFTSS
Trigger: GCTGCTGGTGAAGAATATTCAGCTGGAGGATGGCAA...CCTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp TCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTTGCCATCCTCCAGCTaGATATTCTTCACCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SEALFSLGGAHLTQPRAALPSSS*IFFTSS
Trigger: GCTGCTGGTGAAGAATATTCAGCTGGAGGATGGCAA...AGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp TTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTCACTAACAGCTGGATaGAGTCCCCAAAGGTGGATG +
Preference number: 4 (lower is better)
Translates to: FRSFILPGRGTPHPAKGCSLTAG*SPQRWM
Trigger: CATCCACCTTTGGGGACTTCATCCAGCTGTTAGTGA...GCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTTCACTAACAGCTGGATaGAGTCCCCAAAGGTGGATG +
Preference number: 4 (lower is better)
Translates to: EALFSLGGAHLTQPRAASSLTAG*SPQRWM
Trigger: CATCCACCTTTGGGGACTTCATCCAGCTGTTAGTGA...AGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp CTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGGTCACTAACAGCTGGATaGAGTCCCCAAAGGTGGATG +
Preference number: 4 (lower is better)
Translates to: LLLTGQRASKMQTWCAGRSLTAG*SPQRWM
Trigger: CATCCACCTTTGGGGACTTCATCCAGCTGTTAGTGA...CCTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp TCCATTCTCAAAGGCATCCTTGGCTGCGGCCACTGCCTTGTCGACGTCGGTGACTCACTAACAGCTGGATaGAGTCCCCAAAGGTGGATG +
Preference number: 4 (lower is better)
Translates to: SILKGILGCGHCLVDVGDSLTAG*SPQRWM
Trigger: CATCCACCTTTGGGGACTTCATCCAGCTGTTAGTGA...GTCACCGACGTCGACAAGGCAGTGGCCGCAGCCAAGGATGCCTTTGAGAATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR TCA 90 bp TCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTTTCCATCGGTGGGATTaGTGGTCTCAGAGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: SSEALFSLGGAHLTQPRAFHRWD*WSQRSW
Trigger: CCAAGACCTCTGAGACCATCAATCCCACCGATGGAA...AGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp CTCTCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGTTCCATCGGTGGGATTaGTGGTCTCAGAGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: LSSEALFSLGGAHLTQPRFHRWD*WSQRSW
Trigger: CCAAGACCTCTGAGACCATCAATCCCACCGATGGAA...CCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp CCTAGATCTTTGCCAAATCCAGACTGTTTGAATCCTCCGAAGGGAGCGGCCACGGTGAGTGGGGTCACCTaGGCAGGCTTGATCACCACT +
Preference number: 4 (lower is better)
Translates to: PRSLPNPDCLNPPKGAATVSGVT*AGLITT
Trigger: AGTGGTGATCAAGCCTGCTCAGGTGACCCCACTCAC...CGTGGCCGCTCCCTTCGGAGGATTCAAACAGTCTGGATTTGGCAAAGATCTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR TCA 90 bp ATGCCGGCCTTTAATGTCAGCTCTGCAAACTTCAAGGCTGTGAGTGGGGTCACCGTGAGTGGGGTCACCTaGGCAGGCTTGATCACCACT +
Preference number: 4 (lower is better)
Translates to: MPAFNVSSANFKAVSGVTVSGVT*AGLITT
Trigger: AGTGGTGATCAAGCCTGCTCAGGTGACCCCACTCAC...GGTGACCCCACTCACAGCCTTGAAGTTTGCAGAGCTGACATTAAAGGCCGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR TCA 90 bp TTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGACTGGGGTCTTCCACGTCTGTaGAAACAGTTGGCTCAAAGA +
Preference number: 4 (lower is better)
Translates to: LFSLGGAHLTQPRAASDWGLPRL*KQLAQR
Trigger: TCTTTGAGCCAACTGTTTTCACAGACGTGGAAGACC...CCAGTCAGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCGGTCTTCCACGTCTGTaGAAACAGTTGGCTCAAAGA +
Preference number: 4 (lower is better)
Translates to: GLLLTGQRASKMQTWCAGGLPRL*KQLAQR
Trigger: TCTTTGAGCCAACTGTTTTCACAGACGTGGAAGACC...GCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GTGTCCCTGTCCAGCGGGTTGCCCACCTTCATCTTCCGCACCTCTTCTACCACTACTCCTCCTTGGCTATaGACATGTGGTCTTCCACGT +
Preference number: 4 (lower is better)
Translates to: VSLSSGLPTFIFRTSSTTTPPWL*TCGLPR
Trigger: ACGTGGAAGACCACATGTTCATAGCCAAGGAGGAGT...AGTGGTAGAAGAGGTGCGGAAGATGAAGGTGGGCAACCCGCTGGACAGGGACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR TCA 90 bp GAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTACTCCTCCTTGGCTATaGACATGTGGTCTTCCACGT +
Preference number: 4 (lower is better)
Translates to: EALFSLGGAHLTQPRAASTPPWL*TCGLPR
Trigger: ACGTGGAAGACCACATGTTCATAGCCAAGGAGGAGT...AGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGACTCCTCCTTGGCTATaGACATGTGGTCTTCCACGT +
Preference number: 4 (lower is better)
Translates to: AASDWTEGVQDADMVCRQTPPWL*TCGLPR
Trigger: ACGTGGAAGACCACATGTTCATAGCCAAGGAGGAGT...CTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp TTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGACTGGTCTTGTTGTACGTGTTaGCAAACACAGTGCCTGCCT +
Preference number: 4 (lower is better)
Translates to: LFSLGGAHLTQPRAASDWSCCTC*QTQCLP
Trigger: AGGCAGGCACTGTGTTTGTCAACACGTACAACAAGA...CCAGTCAGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp TCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTCAAATCCAGACTGTTTaGATCCTCCGAAGGGAGCGG +
Preference number: 4 (lower is better)
Translates to: SSEALFSLGGAHLTQPRAQIQTV*ILRRER
Trigger: CCGCTCCCTTCGGAGGATTCAAACAGTCTGGATTTG...AGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GGCCCGAAGGACTCCTCCTTGGCTATGAACATGTGGTCTTCCACGTCTGTGAAACAGGTTAGACTTCTGTaGGCCGCAGCCCCGAAACTG +
Preference number: 4 (lower is better)
Translates to: GPKDSSLAMNMWSSTSVKQVRLL*AAAPKL
Trigger: CAGTTTCGGGGCTGCGGCTCACAGAAGTCTAACCTG...TTTCACAGACGTGGAAGACCACATGTTCATAGCCAAGGAGGAGTCCTTCGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR TCA 90 bp TTGTCATCATTCCCAAAGAGGATGAGTCCTGCTTTGGTGACCACCCCTGGCCGACAGGTTAGACTTCTGTaGGCCGCAGCCCCGAAACTG +
Preference number: 4 (lower is better)
Translates to: LSSFPKRMSPALVTTPGRQVRLL*AAAPKL
Trigger: CAGTTTCGGGGCTGCGGCTCACAGAAGTCTAACCTG...TCGGCCAGGGGTGGTCACCAAAGCAGGACTCATCCTCTTTGGGAATGATGACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493803.5
CDS-3UTR GCA 90 bp TTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTGACTGGGCTCTGTCCAATCACTaGAATCTTCATGGTAGCAGG +
Preference number: 4 (lower is better)
Translates to: LFSLGGAHLTQPRAASDWALSNH*NLHGSR
Trigger: CCTGCTACCATGAAGATTGCAGTGATTGGACAGAGC...CCAGTCAGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp GACGTCGGTGACTTGGGCCAGGGATACCTGGCAGATGACACTTCCATCGGTGGGCAAAGCCTGGTATTTTaGCACCACATCAGGCAAAGC +
Preference number: 4 (lower is better)
Translates to: DVGDLGQGYLADDTSIGGQSLVF*HHIRQS
Trigger: GCTTTGCCTGATGTGGTGGCAAAATACCAGGCTTTG...CCCACCGATGGAAGTGTCATCTGCCAGGTATCCCTGGCCCAAGTCACCGACGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR GCA 90 bp TCCGCACCTCTTCTACCACTCTCCGCACGAACTCATCATGAATGGAGTCCTCCAACCTCACACTCCTTCTaGAGCAGCAGGTCTCCGGTG +
Preference number: 4 (lower is better)
Translates to: SAPLLPLSARTHHEWSPPTSHSF*SSRSPV
Trigger: CACCGGAGACCTGCTGCTGCAGAAGGAGTGTGAGGT...TGGAGGACTCCATTCATGATGAGTTCGTGCGGAGAGTGGTAGAAGAGGTGCGGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR GCA 90 bp GTATTTTGCCACCACATCAGGCAAAGCCTGTCCTTTTGCACGCCACCGGGAGTAACCTCACACTCCTTCTaGAGCAGCAGGTCTCCGGTG +
Preference number: 4 (lower is better)
Translates to: VFCHHIRQSLSFCTPPGVTSHSF*SSRSPV
Trigger: CACCGGAGACCTGCTGCTGCAGAAGGAGTGTGAGGT...TACTCCCGGTGGCGTGCAAAAGGACAGGCTTTGCCTGATGTGGTGGCAAAATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR GCA 90 bp CACGGCATCCAAGTCCCCATCAGCAAACCGAGAGATGATCATGACAGGCCCGAAGTTGTGAATGGCCTCTaGCGGCTGGTCCCAGTTGAT +
Preference number: 4 (lower is better)
Translates to: HGIQVPISKPRDDHDRPEVVNGL*RLVPVD
Trigger: ATCAACTGGGACCAGCCGGCAGAGGCCATTCACAAC...TTCGGGCCTGTCATGATCATCTCTCGGTTTGCTGATGGGGACTTGGATGCCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR GCA 90 bp TTTGATGCCTTCAGGGAAGAGGAAGCGGTTGTACAGCGTGCTCACGGTGTCGTCGTTGTGAATGGCCTCTaGCGGCTGGTCCCAGTTGAT +
Preference number: 4 (lower is better)
Translates to: FDAFREEEAVVQRAHGVVVVNGL*RLVPVD
Trigger: ATCAACTGGGACCAGCCGGCAGAGGCCATTCACAAC...GACGACACCGTGAGCACGCTGTACAACCGCTTCCTCTTCCCTGAAGGCATCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR GCA 90 bp CTCTCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGAAAGAGGATGAGTCCTaGTTTGGTGACCACCCCTGG +
Preference number: 4 (lower is better)
Translates to: LSSEALFSLGGAHLTQPRKEDES*FGDHPW
Trigger: CCAGGGGTGGTCACCAAAGCAGGACTCATCCTCTTT...CCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp TCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTAAAGAGGATGAGTCCTaGTTTGGTGACCACCCCTGG +
Preference number: 4 (lower is better)
Translates to: SSEALFSLGGAHLTQPRAKEDES*FGDHPW
Trigger: CCAGGGGTGGTCACCAAAGCAGGACTCATCCTCTTT...AGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp GAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTAAGGACACTGCTGGCTaGCCCCTTAAAGAAGTTCGA +
Preference number: 4 (lower is better)
Translates to: EALFSLGGAHLTQPRAASKDTAG*PLKEVR
Trigger: TCGAACTTCTTTAAGGGGGCAGCCAGCAGTGTCCTT...AGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp CAGCCAAGGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGAAGGACACTGCTGGCTaGCCCCTTAAAGAAGTTCGA +
Preference number: 4 (lower is better)
Translates to: QPRAASDWTEGVQDADMVKDTAG*PLKEVR
Trigger: TCGAACTTCTTTAAGGGGGCAGCCAGCAGTGTCCTT...CACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp CTGATGGTGGCAGTGGCTGGCAGGTACATGTTGGGCTCCCACCTGTACATCAGCAAGGACACTGCTGGCTaGCCCCTTAAAGAAGTTCGA +
Preference number: 4 (lower is better)
Translates to: LMVAVAGRYMLGSHLYISKDTAG*PLKEVR
Trigger: TCGAACTTCTTTAAGGGGGCAGCCAGCAGTGTCCTT...GCTGATGTACAGGTGGGAGCCCAACATGTACCTGCCAGCCACTGCCACCATCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR GCA 90 bp GTTGCCCACCTTCATCTTCCGCACCTCTTCTACCACTCTCCGCACGAACTCATCCGCAGTAACCAGCTCTaGCTCTGTCAGCTCAAGGAC +
Preference number: 4 (lower is better)
Translates to: VAHLHLPHLFYHSPHELIRSNQL*LCQLKD
Trigger: GTCCTTGAGCTGACAGAGGCAGAGCTGGTTACTGCG...GATGAGTTCGTGCGGAGAGTGGTAGAAGAGGTGCGGAAGATGAAGGTGGGCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR GCA 90 bp GGTTGCCCACCTTCATCTTCCGCACCTCTTCTACCACTCTCCGCACGAACTCATCGCAGTAACCAGCTCTaGCTCTGTCAGCTCAAGGAC +
Preference number: 4 (lower is better)
Translates to: GCPPSSSAPLLPLSARTHRSNQL*LCQLKD
Trigger: GTCCTTGAGCTGACAGAGGCAGAGCTGGTTACTGCG...ATGAGTTCGTGCGGAGAGTGGTAGAAGAGGTGCGGAAGATGAAGGTGGGCAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR GCA 90 bp CTTGAATACCGGCACTCCATCCTTCTCAGCTTCCAGACAGTGGCAGCTGCTTCCCCACGTAGTCAATGCTaGACTCGCCCTCCTCATCGT +
Preference number: 4 (lower is better)
Translates to: LEYRHSILLSFQTVAAASPRSQC*TRPPHR
Trigger: ACGATGAGGAGGGCGAGTGCAGCATTGACTACGTGG...GGAAGCAGCTGCCACTGTCTGGAAGCTGAGAAGGATGGAGTGCCGGTATTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR GCA 90 bp GCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGTTTCCACGTAGTCAATaGTGCACTCGCCCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: AASDWTEGVQDADMVCRQFPRSQ*CTRPPH
Trigger: ATGAGGAGGGCGAGTGCAGCATTGACTACGTGGAAA...CTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp CCATCAGCTTCACAAGGTGGGCATGGTGATTCTGCGGCCCGTGGTCGGTGTCCCAGTGCGCTTGTTCACTaGCATTTCCACGTAGTCAAT +
Preference number: 4 (lower is better)
Translates to: PSASQGGHGDSAARGRCPSALVH*HFHVVN
Trigger: ATTGACTACGTGGAAATGGCAGTGAACAAGCGCACT...GGGACACCGACCACGGGCCGCAGAATCACCATGCCCACCTTGTGAAGCTGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR GCA 90 bp TTCCACGTCTGTGAAAACAGTTGGCTCAAAGAAGAACCCTGGCCGAGGGACCTGAGAGCTGGTGGGGCATaGGGACAGTGCGCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: FHVCENSWLKEEPWPRDLRAGGA*GQCACS
Trigger: TGAACAAGCGCACTGTCCGCATGCCCCACCAGCTCT...CAGGTCCCTCGGCCAGGGTTCTTCTTTGAGCCAACTGTTTTCACAGACGTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR GCA 90 bp CAGCCAAGGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGCCACACCTTTGGGAATaGCGGCCTTTAATGTCAGCT +
Preference number: 4 (lower is better)
Translates to: QPRAASDWTEGVQDADMVPHLWE*RPLMSA
Trigger: AGCTGACATTAAAGGCCGGCATTCCCAAAGGTGTGG...CACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp TTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCCAGCTTTTCATGATGTaGTTGCCCACCTCTGTGGAG +
Preference number: 4 (lower is better)
Translates to: FRSFILPGRGTPHPAKGCQLFMM*LPTSVE
Trigger: CTCCACAGAGGTGGGCAAGCACATCATGAAAAGCTG...GCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp CAGCCAAGGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGCAGCTTTTCATGATGTaGTTGCCCACCTCTGTGGAG +
Preference number: 4 (lower is better)
Translates to: QPRAASDWTEGVQDADMVQLFMM*LPTSVE
Trigger: CTCCACAGAGGTGGGCAAGCACATCATGAAAAGCTG...CACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp CTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGGCAGCTTTTCATGATGTaGTTGCCCACCTCTGTGGAG +
Preference number: 4 (lower is better)
Translates to: LLLTGQRASKMQTWCAGRQLFMM*LPTSVE
Trigger: CTCCACAGAGGTGGGCAAGCACATCATGAAAAGCTG...CCTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp TCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTGAACTCATCCCCATCTaGACAGCCTTGTTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: SEALFSLGGAHLTQPRAAELIPI*TALLRS
Trigger: TGACCTCAACAAGGCTGTGCAGATGGGGATGAGTTC...AGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp CTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGGCACAAAGAGTCGGCCTaGTGCAATGCAATTCTCTCC +
Preference number: 4 (lower is better)
Translates to: LLLTGQRASKMQTWCAGRHKESA*CNAILS
Trigger: GGAGAGAATTGCATTGCAGCAGGCCGACTCTTTGTG...CCTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp TTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCCACAAAGAGTCGGCCTaGTGCAATGCAATTCTCTCC +
Preference number: 4 (lower is better)
Translates to: FRSFILPGRGTPHPAKGCHKESA*CNAILS
Trigger: GGAGAGAATTGCATTGCAGCAGGCCGACTCTTTGTG...GCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp AGGCCTGAAGTGTTCAGCGTTGAGTTGAAAAATGTCAGTTTCTGTTCACAGGCCGCCTCGGACACCCTGTaGTCAGGACCAGCCGGGTGG +
Preference number: 4 (lower is better)
Translates to: RPEVFSVELKNVSFCSQAASDTL*SGPAGW
Trigger: CCACCCGGCTGGTCCTGAGCACAGGGTGTCCGAGGC...GGCCTGTGAACAGAAACTGACATTTTTCAACTCAACGCTGAACACTTCAGGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493803.5
CDS-3UTR CCA 90 bp TCCGCACCTCTTCTACCACTCTCCGCACGAACTCATCATGAATGGAGTCCTCCAATGGCCTCTGCCGGCTaGTCCCAGTTGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: SAPLLPLSARTHHEWSPPMASAG*SQLILA
Trigger: AGCCAAGATCAACTGGGACCAGCCGGCAGAGGCCAT...TGGAGGACTCCATTCATGATGAGTTCGTGCGGAGAGTGGTAGAAGAGGTGCGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp GTTGCCCACCTTCATCTTCCGCACCTCTTCTACCACTCTCCGCACGAACTCATCCAACCTCCAGGACTTTaGGGAGGATCCGCTGCCAAA +
Preference number: 4 (lower is better)
Translates to: VAHLHLPHLFYHSPHELIQPPGL*GGSAAK
Trigger: TTTGGCAGCGGATCCTCCCCAAAGTCCTGGAGGTTG...GATGAGTTCGTGCGGAGAGTGGTAGAAGAGGTGCGGAAGATGAAGGTGGGCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp GGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCTTCCTCACTAACAGCTaGATGAAGTCCCCAAAGGTG +
Preference number: 4 (lower is better)
Translates to: GLLLTGQRASKMQTWCAGFLTNS*MKSPKV
Trigger: CACCTTTGGGGACTTCATCCAGCTGTTAGTGAGGAA...GCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GTTGACAAACACAGTGCCTGCCTGGAGCTTGTCACTGACATACAGGGCCTTGTTTGGTCTCAGAGGTCTTaGCGCCCTCGGCATCCACGA +
Preference number: 4 (lower is better)
Translates to: VDKHSACLELVTDIQGLVWSQRS*RPRHPR
Trigger: TCGTGGATGCCGAGGGCGCCAAGACCTCTGAGACCA...AACAAGGCCCTGTATGTCAGTGACAAGCTCCAGGCAGGCACTGTGTTTGTCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp TTCCACGTCTGTGAAAACAGTTGGCTCAAAGAAGAACCCTGGCCGAGGGACCTGCAGGGAGCCAGATCCTaGGAGGACGTTAACCACACC +
Preference number: 4 (lower is better)
Translates to: FHVCENSWLKEEPWPRDLQGARS*EDVNHT
Trigger: GGTGTGGTTAACGTCCTCCCAGGATCTGGCTCCCTG...CAGGTCCCTCGGCCAGGGTTCTTCTTTGAGCCAACTGTTTTCACAGACGTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp TCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTTCCTTCACGCCATGCTaGCAGTACTCCATCAGCTTC +
Preference number: 4 (lower is better)
Translates to: SSEALFSLGGAHLTQPRASFTPC*QYSISF
Trigger: GAAGCTGATGGAGTACTGCCAGCATGGCGTGAAGGA...AGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp TTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCAACACAGTGCCTGCCTaGAGCTTGTCACTGACATAC +
Preference number: 4 (lower is better)
Translates to: FRSFILPGRGTPHPAKGCNTVPA*SLSLTY
Trigger: GTATGTCAGTGACAAGCTCCAGGCAGGCACTGTGTT...GCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp CACGGCATCCAAGTCCCCATCAGCAAACCGAGAGATGATCATGACAGGCCCGAAAGGGCTGCTTCTGACTaGACAGAGGGCGTCCAAGAT +
Preference number: 4 (lower is better)
Translates to: HGIQVPISKPRDDHDRPERAASD*TEGVQD
Trigger: ATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCT...TTCGGGCCTGTCATGATCATCTCTCGGTTTGCTGATGGGGACTTGGATGCCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp TTCTCAGCTTCCAGACAGTGGCAGCTGCTTCCTGCAGTCGCTGTCCCCAATAACTCAGCTTCCAGACAGTaGCAGCTGCTTCCTGCAGTC +
Preference number: 4 (lower is better)
Translates to: FSASRQWQLLPAVAVPNNSASRQ*QLLPAV
Trigger: GACTGCAGGAAGCAGCTGCCACTGTCTGGAAGCTGA...GTTATTGGGGACAGCGACTGCAGGAAGCAGCTGCCACTGTCTGGAAGCTGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000511283.2
CDS-3UTR CCA 90 bp AATTGGCTGCAGAAGGGCAGGACGTTGAGCTCGGCCCCCAAAGCCTGGTATTTTCCAGTAGTCAGAGCCTaGCTGAGCAAGCAGAGACCA +
Preference number: 4 (lower is better)
Translates to: NWLQKGRTLSSAPKAWYFPVVRA*LSKQRP
Trigger: TGGTCTCTGCTTGCTCAGCCAGGCTCTGACTACTGG...AAAATACCAGGCTTTGGGGGCCGAGCTCAACGTCCTGCCCTTCTGCAGCCAATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR CAA 72 bp TGTTTGAATCCTCCGAAGGGAGCGGCCACGTCGGTCTaGTTGTACGTGTTGACAAACACAGTGCCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: CLNPPKGAATSV*LYVLTNTVPAW
Trigger: CCAGGCAGGCACTGTGTTTGTCAACACGTACAACAAGACCGACGTGGCCGCTCCCTTCGGAGGATTCAAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR CAA 72 bp GGCAGCTGCTTCCTGCAGTCGCTGTCCCCAATAACTTaGGGCTCTCTGCCTTCCACTCTTCAATACCCAAGG +
Preference number: 4 (lower is better)
Translates to: GSCFLQSLSPIT*GSLPSTLQYPR
Trigger: CCTTGGGTATTGAAGAGTGGAAGGCAGAGAGCCCAAAGTTATTGGGGACAGCGACTGCAGGAAGCAGCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000511283.2
3UTR CAA 72 bp GGCAAAGCCTGTCCTTTTGCACGCCACCGGGAGTACTaGAATACCGGCACTCCATCCTTCTCAGCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: GKACPFARHREY*NTGTPSFSASR
Trigger: TCTGGAAGCTGAGAAGGATGGAGTGCCGGTATTCAAGTACTCCCGGTGGCGTGCAAAAGGACAGGCTTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR CAA 72 bp ACCAGCCTCACAACGTCCACAGACGCGGCCCCTGACTaGAAGAAATCAGTGGAGTCTTCAACCTCCAGGACT +
Preference number: 4 (lower is better)
Translates to: TSLTTSTDAAPD*KKSVESSTSRT
Trigger: AGTCCTGGAGGTTGAAGACTCCACTGATTTCTTCAAGTCAGGGGCCGCGTCTGTGGACGTTGTGAGGCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR TCA 90 bp CACGGCATCCAAGTCCCCATCAGCAAACCGAGAGATGATCATGACAGGCCCGAACCTTGTCTGGAACAGTaGACACACCCACCACTTCGT +
Preference number: 4 (lower is better)
Translates to: HGIQVPISKPRDDHDRPEPCLEQ*THPPLR
Trigger: ACGAAGTGGTGGGTGTGTTCACTGTTCCAGACAAGG...TTCGGGCCTGTCATGATCATCTCTCGGTTTGCTGATGGGGACTTGGATGCCGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR TCA 90 bp TCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTTTATCTCCATGGGGATaGATTGGCTGCAGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: SSEALFSLGGAHLTQPRALSPWG*IGCRRA
Trigger: TGCCCTTCTGCAGCCAATTCATCCCCATGGAGATAA...AGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp CCGAGAGATGATCATGACAGGCCCGAAGGACTCCTCCTTGGCTATGAACATGTGGTGCCTAGGGAGCAGTaGCGGGTGATAGATGATGGA +
Preference number: 4 (lower is better)
Translates to: PRDDHDRPEGLLLGYEHVVPREQ*RVIDDG
Trigger: TCCATCATCTATCACCCGTCACTGCTCCCTAGGCAC...CACATGTTCATAGCCAAGGAGGAGTCCTTCGGGCCTGTCATGATCATCTCTCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR TCA 90 bp CTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGGCCTTTCTTATCTCCGTaGATGAGGGTCCAGTTGATG +
Preference number: 4 (lower is better)
Translates to: LLLTGQRASKMQTWCAGRPFLSP*MRVQLM
Trigger: CATCAACTGGACCCTCATTCACGGAGATAAGAAAGG...CCTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp TCGCTGTCCCCAATAACTTTGGGCTCTCTGCCTTCCACTCTTCAATACCCAAGGCCGGCTGGTCCCAGTTaGTCTTGGCTGTCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: SLSPITLGSLPSTLQYPRPAGPS*SWLSPS
Trigger: AGAAGGAGACAGCCAAGATCAACTGGGACCAGCCGG...CCTTGGGTATTGAAGAGTGGAAGGCAGAGAGCCCAAAGTTATTGGGGACAGCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR TCA 90 bp GTGCCTGCCTGGAGCTTGTCACTGACATACAGGGCCTTGTTGATGTCCCTGGTGTTGCCATCCTCCAGCTaGATATTCTTCACCAGCAGC +
Preference number: 4 (lower is better)
Translates to: VPAWSLSLTYRALLMSLVLPSSS*IFFTSS
Trigger: GCTGCTGGTGAAGAATATTCAGCTGGAGGATGGCAA...CACCAGGGACATCAACAAGGCCCTGTATGTCAGTGACAAGCTCCAGGCAGGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR TCA 90 bp CTGGCAGTACTCCATCAGCTTCACAAGGTGGGCATGGTGATTCTGCGGCCCGTGGGTCTTCCACGTCTGTaGAAACAGTTGGCTCAAAGA +
Preference number: 4 (lower is better)
Translates to: LAVLHQLHKVGMVILRPVGLPRL*KQLAQR
Trigger: TCTTTGAGCCAACTGTTTTCACAGACGTGGAAGACC...CACGGGCCGCAGAATCACCATGCCCACCTTGTGAAGCTGATGGAGTACTGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR TCA 90 bp CTCTCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGACTCCTCCTTGGCTATaGACATGTGGTCTTCCACGT +
Preference number: 4 (lower is better)
Translates to: LSSEALFSLGGAHLTQPRTPPWL*TCGLPR
Trigger: ACGTGGAAGACCACATGTTCATAGCCAAGGAGGAGT...CCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTTCTTGTTGTACGTGTTaGCAAACACAGTGCCTGCCT +
Preference number: 4 (lower is better)
Translates to: EALFSLGGAHLTQPRAASSCCTC*QTQCLP
Trigger: AGGCAGGCACTGTGTTTGTCAACACGTACAACAAGA...AGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp CTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGGTCTTGTTGTACGTGTTaGCAAACACAGTGCCTGCCT +
Preference number: 4 (lower is better)
Translates to: LLLTGQRASKMQTWCAGRSCCTC*QTQCLP
Trigger: AGGCAGGCACTGTGTTTGTCAACACGTACAACAAGA...CCTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp TCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTCAAGTCTGGGACTCCTaGTTAAATTCCGTCTCTGTC +
Preference number: 4 (lower is better)
Translates to: SEALFSLGGAHLTQPRAAQVWDS*LNSVSV
Trigger: GACAGAGACGGAATTTAATCAGGAGTCCCAGACTTG...AGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472186.5
CDS-3UTR GCA 90 bp CAGCCAAGGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGGCTCTGTCCAATCACTaGAATCTTCATGGTAGCAGG +
Preference number: 4 (lower is better)
Translates to: QPRAASDWTEGVQDADMVALSNH*NLHGSR
Trigger: CCTGCTACCATGAAGATTGCAGTGATTGGACAGAGC...CACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp GCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGCAAAGCCTGGTATTTTaGCACCACATCAGGCAAAGC +
Preference number: 4 (lower is better)
Translates to: AASDWTEGVQDADMVCRQQSLVF*HHIRQS
Trigger: GCTTTGCCTGATGTGGTGGCAAAATACCAGGCTTTG...CTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp CAGCCAAGGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGCAAAGCCTGGTATTTTaGCACCACATCAGGCAAAGC +
Preference number: 4 (lower is better)
Translates to: QPRAASDWTEGVQDADMVQSLVF*HHIRQS
Trigger: GCTTTGCCTGATGTGGTGGCAAAATACCAGGCTTTG...CACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp GAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTCAAAGCCTGGTATTTTaGCACCACATCAGGCAAAGC +
Preference number: 4 (lower is better)
Translates to: EALFSLGGAHLTQPRAASQSLVF*HHIRQS
Trigger: GCTTTGCCTGATGTGGTGGCAAAATACCAGGCTTTG...AGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp CCACTCTCCGCACGAACTCATCATGAATGGAGTCCTCCACAAAGAGTCGGCCTGAAAGAGGATGAGTCCTaGTTTGGTGACCACCCCTGG +
Preference number: 4 (lower is better)
Translates to: PLSARTHHEWSPPQRVGLKEDES*FGDHPW
Trigger: CCAGGGGTGGTCACCAAAGCAGGACTCATCCTCTTT...CAGGCCGACTCTTTGTGGAGGACTCCATTCATGATGAGTTCGTGCGGAGAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR GCA 90 bp GCCAAATTCCGTGGCATTGGCCCGAGACAGCACGGCATCCAAGTCCCCATCAGCGTCCCCAAAGGTGGATaGCATGTACACATCTTCATT +
Preference number: 4 (lower is better)
Translates to: AKFRGIGPRQHGIQVPISVPKGG*HVHIFI
Trigger: AATGAAGATGTGTACATGGCATCCACCTTTGGGGAC...GCTGATGGGGACTTGGATGCCGTGCTGTCTCGGGCCAATGCCACGGAATTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR GCA 90 bp GGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCGTCCCCAAAGGTGGATaGCATGTACACATCTTCATT +
Preference number: 4 (lower is better)
Translates to: GLLLTGQRASKMQTWCAGVPKGG*HVHIFI
Trigger: AATGAAGATGTGTACATGGCATCCACCTTTGGGGAC...GCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp GTGCCTGCCTGGAGCTTGTCACTGACATACAGGGCCTTGTTGATGTCCCTGGTGTTTCCACGTAGTCAATaGTGCACTCGCCCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: VPAWSLSLTYRALLMSLVFPRSQ*CTRPPH
Trigger: ATGAGGAGGGCGAGTGCAGCATTGACTACGTGGAAA...CACCAGGGACATCAACAAGGCCCTGTATGTCAGTGACAAGCTCCAGGCAGGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR GCA 90 bp TCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTTTTCCACGTAGTCAATaGTGCACTCGCCCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: SSEALFSLGGAHLTQPRAFPRSQ*CTRPPH
Trigger: ATGAGGAGGGCGAGTGCAGCATTGACTACGTGGAAA...AGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp GACGTCGGTGACTTGGGCCAGGGATACCTGGCAGATGACACTTCCATCGGTGGGAGTGCGCTTGTTCACTaGCATTTCCACGTAGTCAAT +
Preference number: 4 (lower is better)
Translates to: DVGDLGQGYLADDTSIGGSALVH*HFHVVN
Trigger: ATTGACTACGTGGAAATGGCAGTGAACAAGCGCACT...CCCACCGATGGAAGTGTCATCTGCCAGGTATCCCTGGCCCAAGTCACCGACGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR GCA 90 bp ATGCCGGCCTTTAATGTCAGCTCTGCAAACTTCAAGGCTGTGAGTGGGGTCACCGGGGCATGCGGACAGTaGGCTTGTTCACTGCCATTT +
Preference number: 4 (lower is better)
Translates to: MPAFNVSSANFKAVSGVTGACGQ*ACSLPF
Trigger: AAATGGCAGTGAACAAGCGCACTGTCCGCATGCCCC...GGTGACCCCACTCACAGCCTTGAAGTTTGCAGAGCTGACATTAAAGGCCGGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR GCA 90 bp CTCTCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGCCACACCTTTGGGAATaGCGGCCTTTAATGTCAGCT +
Preference number: 4 (lower is better)
Translates to: LSSEALFSLGGAHLTQPRPHLWE*RPLMSA
Trigger: AGCTGACATTAAAGGCCGGCATTCCCAAAGGTGTGG...CCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp TCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTCCACACCTTTGGGAATaGCGGCCTTTAATGTCAGCT +
Preference number: 4 (lower is better)
Translates to: SSEALFSLGGAHLTQPRAPHLWE*RPLMSA
Trigger: AGCTGACATTAAAGGCCGGCATTCCCAAAGGTGTGG...AGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp CTCTCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGAACTCATCCCCATCTaGACAGCCTTGTTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: LSSEALFSLGGAHLTQPRELIPI*TALLRS
Trigger: TGACCTCAACAAGGCTGTGCAGATGGGGATGAGTTC...CCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp TCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGAACTCATCCCCATCTaGACAGCCTTGTTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: SSEALFSLGGAHLTQPRAELIPI*TALLRS
Trigger: TGACCTCAACAAGGCTGTGCAGATGGGGATGAGTTC...AGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp GCCAAATTCCGTGGCATTGGCCCGAGACAGCACGGCATCCAAGTCCCCATCAGCAAAGAGTCGGCCTGCTaGAATGCAATTCTCTCCTTT +
Preference number: 4 (lower is better)
Translates to: AKFRGIGPRQHGIQVPISKESAC*NAILSF
Trigger: AAAGGAGAGAATTGCATTGCAGCAGGCCGACTCTTT...GCTGATGGGGACTTGGATGCCGTGCTGTCTCGGGCCAATGCCACGGAATTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp TTCCACGTCTGTGAAAACAGTTGGCTCAAAGAAGAACCCTGGCCGAGGGACCTGGAATCCCCTCATAGGTaGCTCCTTCCTCAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: FHVCENSWLKEEPWPRDLESPHR*LLPQAE
Trigger: CTCAGCCTGAGGAAGGAGCCACCTATGAGGGGATTC...CAGGTCCCTCGGCCAGGGTTCTTCTTTGAGCCAACTGTTTTCACAGACGTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp GTTGACAAACACAGTGCCTGCCTGGAGCTTGTCACTGACATACAGGGCCTTGTTATGGCCTCTGCCGGCTaGTCCCAGTTGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: VDKHSACLELVTDIQGLVMASAG*SQLILA
Trigger: AGCCAAGATCAACTGGGACCAGCCGGCAGAGGCCAT...AACAAGGCCCTGTATGTCAGTGACAAGCTCCAGGCAGGCACTGTGTTTGTCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp GAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTTTCCTCACTAACAGCTaGATGAAGTCCCCAAAGGTG +
Preference number: 4 (lower is better)
Translates to: EALFSLGGAHLTQPRAASFLTNS*MKSPKV
Trigger: CACCTTTGGGGACTTCATCCAGCTGTTAGTGAGGAA...AGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GCATTGGCCCGAGACAGCACGGCATCCAAGTCCCCATCAGCAAACCGAGAGATGTTCCTCACTAACAGCTaGATGAAGTCCCCAAAGGTG +
Preference number: 4 (lower is better)
Translates to: ALARDSTASKSPSANREMFLTNS*MKSPKV
Trigger: CACCTTTGGGGACTTCATCCAGCTGTTAGTGAGGAA...CATCTCTCGGTTTGCTGATGGGGACTTGGATGCCGTGCTGTCTCGGGCCAATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp CAGCCAAGGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTTCCTCACTAACAGCTaGATGAAGTCCCCAAAGGTG +
Preference number: 4 (lower is better)
Translates to: QPRAASDWTEGVQDADMVFLTNS*MKSPKV
Trigger: CACCTTTGGGGACTTCATCCAGCTGTTAGTGAGGAA...CACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GGCCCGAAGGACTCCTCCTTGGCTATGAACATGTGGTCTTCCACGTCTGTGAAATGGGCCAGGGATACCTaGCAGATGACACTTCCATCG +
Preference number: 4 (lower is better)
Translates to: GPKDSSLAMNMWSSTSVKWARDT*QMTLPS
Trigger: CGATGGAAGTGTCATCTGCCAGGTATCCCTGGCCCA...TTTCACAGACGTGGAAGACCACATGTTCATAGCCAAGGAGGAGTCCTTCGGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp CCACTCTCCGCACGAACTCATCATGAATGGAGTCCTCCACAAAGAGTCGGCCTGTCCTTCACGCCATGCTaGCAGTACTCCATCAGCTTC +
Preference number: 4 (lower is better)
Translates to: PLSARTHHEWSPPQRVGLSFTPC*QYSISF
Trigger: GAAGCTGATGGAGTACTGCCAGCATGGCGTGAAGGA...CAGGCCGACTCTTTGTGGAGGACTCCATTCATGATGAGTTCGTGCGGAGAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp CCAGATCCTGGGAGGACGTTAACCACACCTTTGGGAATGCCGGCCTTTAATGTCCAAATTCCGTGGCATTaGCCCGAGACAGCACGGCAT +
Preference number: 4 (lower is better)
Translates to: PDPGRTLTTPLGMPAFNVQIPWH*PETARH
Trigger: ATGCCGTGCTGTCTCGGGCCAATGCCACGGAATTTG...GACATTAAAGGCCGGCATTCCCAAAGGTGTGGTTAACGTCCTCCCAGGATCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp ATGTCCCTGGTGAAGACACCAGAAGCCAGGCCAAATTCCGTGGCATTGGCCCGAAACACAGTGCCTGCCTaGAGCTTGTCACTGACATAC +
Preference number: 4 (lower is better)
Translates to: MSLVKTPEARPNSVALARNTVPA*SLSLTY
Trigger: GTATGTCAGTGACAAGCTCCAGGCAGGCACTGTGTT...TCGGGCCAATGCCACGGAATTTGGCCTGGCTTCTGGTGTCTTCACCAGGGACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp GCCTTCCACTCTTCAATACCCAAGGAACACTTCTTTGTATTCAGTTCTCTGTTAACCGCGCGCAGGAGTTaGTGCGGGCGTCCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: AFHSSIPKEHFFVFSSLLTARRS*CGRPGQ
Trigger: CTGCCCGGGACGCCCGCACCAACTCCTGCGCGCGGT...TAACAGAGAACTGAATACAAAGAAGTGTTCCTTGGGTATTGAAGAGTGGAAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473607.5
3UTR CAA 72 bp AGGGAGCCAGATCCTGGGAGGACGTTAACCACACCTTaGGGAATGCCGGCCTTTAATGTCAGCTCTGCAAAC +
Preference number: 4 (lower is better)
Translates to: REPDPGRTLTTP*GMPAFNVSSAN
Trigger: GTTTGCAGAGCTGACATTAAAGGCCGGCATTCCCAAAGGTGTGGTTAACGTCCTCCCAGGATCTGGCTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR CAA 72 bp ATTTTGTCATCATTCCCAAAGAGGATGAGTCCTGCTTaGGTGACCACCCCTGGCCGATGGGCTCCTGGGATG +
Preference number: 4 (lower is better)
Translates to: ILSSFPKRMSPA*VTTPGRWAPGM
Trigger: CATCCCAGGAGCCCATCGGCCAGGGGTGGTCACCAAAGCAGGACTCATCCTCTTTGGGAATGATGACAAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000493803.5
3UTR CAA 72 bp TTGAAGAAATCAGTGGAGTCTTCAACCTCCAGGACTTaGGGGAGGATCCGCTGCCAAACACTCCGCACAGCC +
Preference number: 4 (lower is better)
Translates to: LKKSVESSTSRT*GRIRCQTLRTA
Trigger: GGCTGTGCGGAGTGTTTGGCAGCGGATCCTCCCCAAAGTCCTGGAGGTTGAAGACTCCACTGATTTCTTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR TCA 90 bp TCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTCCTTTCTTATCTCCGTaGATGAGGGTCCAGTTGATG +
Preference number: 4 (lower is better)
Translates to: SSEALFSLGGAHLTQPRAPFLSP*MRVQLM
Trigger: CATCAACTGGACCCTCATTCACGGAGATAAGAAAGG...AGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GGCCCGAAGGACTCCTCCTTGGCTATGAACATGTGGTCTTCCACGTCTGTGAAAACGCGGCCCCTGACTTaGAGAAATCAGTGGAGTCTT +
Preference number: 4 (lower is better)
Translates to: GPKDSSLAMNMWSSTSVKTRPLT*RNQWSL
Trigger: AAGACTCCACTGATTTCTTCAAGTCAGGGGCCGCGT...TTTCACAGACGTGGAAGACCACATGTTCATAGCCAAGGAGGAGTCCTTCGGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR TCA 90 bp CCGAGAGATGATCATGACAGGCCCGAAGGACTCCTCCTTGGCTATGAACATGTGACGCGGCCCCTGACTTaGAGAAATCAGTGGAGTCTT +
Preference number: 4 (lower is better)
Translates to: PRDDHDRPEGLLLGYEHVTRPLT*RNQWSL
Trigger: AAGACTCCACTGATTTCTTCAAGTCAGGGGCCGCGT...CACATGTTCATAGCCAAGGAGGAGTCCTTCGGGCCTGTCATGATCATCTCTCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR TCA 90 bp CCAGATCCTGGGAGGACGTTAACCACACCTTTGGGAATGCCGGCCTTTAATGTCTTCCATCGGTGGGATTaGTGGTCTCAGAGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: PDPGRTLTTPLGMPAFNVFHRWD*WSQRSW
Trigger: CCAAGACCTCTGAGACCATCAATCCCACCGATGGAA...GACATTAAAGGCCGGCATTCCCAAAGGTGTGGTTAACGTCCTCCCAGGATCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR TCA 90 bp CAGGGACTTTCTTCTCACAAAGACCTTTCTTCAGTATTCGAAGGTCACTGTCTTCCCGGTCCCGCGCACTaGTCTTCCCCCACCGTCCAT +
Preference number: 4 (lower is better)
Translates to: QGLSSHKDLSSVFEGHCLPGPAH*SSPTVH
Trigger: ATGGACGGTGGGGGAAGATCAGTGCGCGGGACCGGG...AAGACAGTGACCTTCGAATACTGAAGAAAGGTCTTTGTGAGAAGAAAGTCCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR TCA 90 bp CTCTCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGGTCTTCCACGTCTGTaGAAACAGTTGGCTCAAAGA +
Preference number: 4 (lower is better)
Translates to: LSSEALFSLGGAHLTQPRGLPRL*KQLAQR
Trigger: TCTTTGAGCCAACTGTTTTCACAGACGTGGAAGACC...CCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GTGGACGGTCTCTCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCGGTCTTCCACGTCTGTaGAAACAGTTGGCTCAAAGA +
Preference number: 4 (lower is better)
Translates to: VDGLSSEALFSLGGAHLTGLPRL*KQLAQR
Trigger: TCTTTGAGCCAACTGTTTTCACAGACGTGGAAGACC...GGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGAGAGACCGTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455064.6
CDS-3UTR TCA 90 bp CCAGATCCTGGGAGGACGTTAACCACACCTTTGGGAATGCCGGCCTTTAATGTCCAAATCCAGACTGTTTaGATCCTCCGAAGGGAGCGG +
Preference number: 4 (lower is better)
Translates to: PDPGRTLTTPLGMPAFNVQIQTV*ILRRER
Trigger: CCGCTCCCTTCGGAGGATTCAAACAGTCTGGATTTG...GACATTAAAGGCCGGCATTCCCAAAGGTGTGGTTAACGTCCTCCCAGGATCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR GCA 90 bp ATGTCCCTGGTGAAGACACCAGAAGCCAGGCCAAATTCCGTGGCATTGGCCCGAGCTCTGTCCAATCACTaGAATCTTCATGGTAGCAGG +
Preference number: 4 (lower is better)
Translates to: MSLVKTPEARPNSVALARALSNH*NLHGSR
Trigger: CCTGCTACCATGAAGATTGCAGTGATTGGACAGAGC...TCGGGCCAATGCCACGGAATTTGGCCTGGCTTCTGGTGTCTTCACCAGGGACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR GCA 90 bp TCATTCCCAAAGAGGATGAGTCCTGCTTTGGTGACCACCCCTGGCCGATGGGCTGCTCTGTCCAATCACTaGAATCTTCATGGTAGCAGG +
Preference number: 4 (lower is better)
Translates to: SFPKRMSPALVTTPGRWAALSNH*NLHGSR
Trigger: CCTGCTACCATGAAGATTGCAGTGATTGGACAGAGC...AGCCCATCGGCCAGGGGTGGTCACCAAAGCAGGACTCATCCTCTTTGGGAATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000493803.5
CDS-3UTR GCA 90 bp CCGAGAGATGATCATGACAGGCCCGAAGGACTCCTCCTTGGCTATGAACATGTGAAAGAGGATGAGTCCTaGTTTGGTGACCACCCCTGG +
Preference number: 4 (lower is better)
Translates to: PRDDHDRPEGLLLGYEHVKEDES*FGDHPW
Trigger: CCAGGGGTGGTCACCAAAGCAGGACTCATCCTCTTT...CACATGTTCATAGCCAAGGAGGAGTCCTTCGGGCCTGTCATGATCATCTCTCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR GCA 90 bp GAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTAGGCCAGGATCATTTTaGCATCCTCCAGCTGAATAT +
Preference number: 4 (lower is better)
Translates to: EALFSLGGAHLTQPRAASRPGSF*HPPAEY
Trigger: ATATTCAGCTGGAGGATGGCAAAATGATCCTGGCCT...AGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp TCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTGTCCCCAAAGGTGGATaGCATGTACACATCTTCATT +
Preference number: 4 (lower is better)
Translates to: SEALFSLGGAHLTQPRAAVPKGG*HVHIFI
Trigger: AATGAAGATGTGTACATGGCATCCACCTTTGGGGAC...AGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp TCAGGCAAAGCCTGTCCTTTTGCACGCCACCGGGAGTACTTGAATACCGGCACTTTTCCACGTAGTCAATaGTGCACTCGCCCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: SGKACPFARHREYLNTGTFPRSQ*CTRPPH
Trigger: ATGAGGAGGGCGAGTGCAGCATTGACTACGTGGAAA...AGTGCCGGTATTCAAGTACTCCCGGTGGCGTGCAAAAGGACAGGCTTTGCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR GCA 90 bp GCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGAGTGCGCTTGTTCACTaGCATTTCCACGTAGTCAAT +
Preference number: 4 (lower is better)
Translates to: AASDWTEGVQDADMVCRQSALVH*HFHVVN
Trigger: ATTGACTACGTGGAAATGGCAGTGAACAAGCGCACT...CTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp CAGCCAAGGGCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGAGTGCGCTTGTTCACTaGCATTTCCACGTAGTCAAT +
Preference number: 4 (lower is better)
Translates to: QPRAASDWTEGVQDADMVSALVH*HFHVVN
Trigger: ATTGACTACGTGGAAATGGCAGTGAACAAGCGCACT...CACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGCCCTTGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp GAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTAGTGCGCTTGTTCACTaGCATTTCCACGTAGTCAAT +
Preference number: 4 (lower is better)
Translates to: EALFSLGGAHLTQPRAASSALVH*HFHVVN
Trigger: ATTGACTACGTGGAAATGGCAGTGAACAAGCGCACT...AGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp CTCATCATGAATGGAGTCCTCCACAAAGAGTCGGCCTGCTGCAATGCAATTCTCAGAGCTGGTGGGGCATaGGGACAGTGCGCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: LIMNGVLHKESACCNAILRAGGA*GQCACS
Trigger: TGAACAAGCGCACTGTCCGCATGCCCCACCAGCTCT...GAGAATTGCATTGCAGCAGGCCGACTCTTTGTGGAGGACTCCATTCATGATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR GCA 90 bp CTGGCAGTACTCCATCAGCTTCACAAGGTGGGCATGGTGATTCTGCGGCCCGTGAAAGAGTCGGCCTGCTaGAATGCAATTCTCTCCTTT +
Preference number: 4 (lower is better)
Translates to: LAVLHQLHKVGMVILRPVKESAC*NAILSF
Trigger: AAAGGAGAGAATTGCATTGCAGCAGGCCGACTCTTT...CACGGGCCGCAGAATCACCATGCCCACCTTGTGAAGCTGATGGAGTACTGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR GCA 90 bp TCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTAAAGAGTCGGCCTGCTaGAATGCAATTCTCTCCTTT +
Preference number: 4 (lower is better)
Translates to: SEALFSLGGAHLTQPRAAKESAC*NAILSF
Trigger: AAAGGAGAGAATTGCATTGCAGCAGGCCGACTCTTT...AGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp GTTGCCCACCTTCATCTTCCGCACCTCTTCTACCACTCTCCGCACGAACTCATCCACAAAGAGTCGGCCTaGTGCAATGCAATTCTCTCC +
Preference number: 4 (lower is better)
Translates to: VAHLHLPHLFYHSPHELIHKESA*CNAILS
Trigger: GGAGAGAATTGCATTGCAGCAGGCCGACTCTTTGTG...GATGAGTTCGTGCGGAGAGTGGTAGAAGAGGTGCGGAAGATGAAGGTGGGCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp TATGGCACAGCTTTTCATGATGTGCTTGCCCACCTCTGTGGAGCCTGTGAACCCTCGGCCCCCAAAGCCTaGTATTTTGCCACCACATCA +
Preference number: 4 (lower is better)
Translates to: YGTAFHDVLAHLCGACEPSAPKA*YFATTS
Trigger: TGATGTGGTGGCAAAATACCAGGCTTTGGGGGCCGA...GGGTTCACAGGCTCCACAGAGGTGGGCAAGCACATCATGAAAAGCTGTGCCATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000455064.6
CDS-3UTR CCA 90 bp GCACTGATTATCTCCATGGGGATGAATTGGCTGCAGAAGGGCAGGACGTTGAGCTCGGCCCCCAAAGCCTaGTATTTTGCCACCACATCA +
Preference number: 4 (lower is better)
Translates to: ALIISMGMNWLQKGRTLSSAPKA*YFATTS
Trigger: TGATGTGGTGGCAAAATACCAGGCTTTGGGGGCCGA...GCTCAACGTCCTGCCCTTCTGCAGCCAATTCATCCCCATGGAGATAATCAGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR CCA 90 bp CTCTCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGTTCCTCACTAACAGCTaGATGAAGTCCCCAAAGGTG +
Preference number: 4 (lower is better)
Translates to: LSSEALFSLGGAHLTQPRFLTNS*MKSPKV
Trigger: CACCTTTGGGGACTTCATCCAGCTGTTAGTGAGGAA...CCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp TCATTCCCAAAGAGGATGAGTCCTGCTTTGGTGACCACCCCTGGCCGATGGGCTTTCCTCACTAACAGCTaGATGAAGTCCCCAAAGGTG +
Preference number: 4 (lower is better)
Translates to: SFPKRMSPALVTTPGRWAFLTNS*MKSPKV
Trigger: CACCTTTGGGGACTTCATCCAGCTGTTAGTGAGGAA...AGCCCATCGGCCAGGGGTGGTCACCAAAGCAGGACTCATCCTCTTTGGGAATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR CCA 90 bp CATCTTCCGCACCTCTTCTACCACTCTCCGCACGAACTCATCATGAATGGAGTCTCTCAAAGGCATCCTTaGCTGCGGCCACTGCCTTGT +
Preference number: 4 (lower is better)
Translates to: HLPHLFYHSPHELIMNGVSQRHP*LRPLPC
Trigger: ACAAGGCAGTGGCCGCAGCCAAGGATGCCTTTGAGA...GACTCCATTCATGATGAGTTCGTGCGGAGAGTGGTAGAAGAGGTGCGGAAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp AAGACCTTTCTTCAGTATTCGAAGGTCACTGTCTTGACCCGCAGGTACTCGTTCCGGTTGGGTCTGGCCTaGTTGATGGGGATGGTGGAG +
Preference number: 4 (lower is better)
Translates to: KTFLQYSKVTVLTRRYSFRLGLA*LMGMVE
Trigger: CTCCACCATCCCCATCAACCAGGCCAGACCCAACCG...GAACGAGTACCTGCGGGTCAAGACAGTGACCTTCGAATACTGAAGAAAGGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp GACCTTTCTTCAGTATTCGAAGGTCACTGTCTTGACCCGCAGGTACTCGTTCAGTGGTCTGAGAGTCTCTaGCCGACCAGGGAGCCAGAT +
Preference number: 4 (lower is better)
Translates to: DLSSVFEGHCLDPQVLVQWSESL*PTREPD
Trigger: ATCTGGCTCCCTGGTCGGCCAGAGACTCTCAGACCA...CTGAACGAGTACCTGCGGGTCAAGACAGTGACCTTCGAATACTGAAGAAAGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp TCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTCGAACTCATCATGAATaGAGTCCTCCACAAAGAGTC +
Preference number: 4 (lower is better)
Translates to: SEALFSLGGAHLTQPRAARTHHE*SPPQRV
Trigger: GACTCTTTGTGGAGGACTCCATTCATGATGAGTTCG...AGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GCATTGGCCCGAGACAGCACGGCATCCAAGTCCCCATCAGCAAACCGAGAGATGCGAACTCATCATGAATaGAGTCCTCCACAAAGAGTC +
Preference number: 4 (lower is better)
Translates to: ALARDSTASKSPSANREMRTHHE*SPPQRV
Trigger: GACTCTTTGTGGAGGACTCCATTCATGATGAGTTCG...CATCTCTCGGTTTGCTGATGGGGACTTGGATGCCGTGCTGTCTCGGGCCAATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp TTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCCGAACTCATCATGAATaGAGTCCTCCACAAAGAGTC +
Preference number: 4 (lower is better)
Translates to: FRSFILPGRGTPHPAKGCRTHHE*SPPQRV
Trigger: GACTCTTTGTGGAGGACTCCATTCATGATGAGTTCG...GCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR CCA 90 bp GGCCCGAAGGACTCCTCCTTGGCTATGAACATGTGGTCTTCCACGTCTGTGAAATCCTTCACGCCATGCTaGCAGTACTCCATCAGCTTC +
Preference number: 4 (lower is better)
Translates to: GPKDSSLAMNMWSSTSVKSFTPC*QYSISF
Trigger: GAAGCTGATGGAGTACTGCCAGCATGGCGTGAAGGA...TTTCACAGACGTGGAAGACCACATGTTCATAGCCAAGGAGGAGTCCTTCGGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp TACCGGCACTCCATCCTTCTCAGCTTCCAGACAGTGGCAGCTGCTTCCTGCAGTCTAGAAGCTGTACTTTaGATCCCGCTTCTGACACCA +
Preference number: 4 (lower is better)
Translates to: YRHSILLSFQTVAAASCSLEAVL*IPLLTP
Trigger: TGGTGTCAGAAGCGGGATCCAAAGTACAGCTTCTAG...ACTGCAGGAAGCAGCTGCCACTGTCTGGAAGCTGAGAAGGATGGAGTGCCGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511283.2
CDS-3UTR TCA 90 bp CGTGTTGACAAACACAGTGCCTGCCTGGAGCTTGTCACTGACATACAGGGCCTTTTATCTCCATGGGGATaGATTGGCTGCAGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: RVDKHSACLELVTDIQGLLSPWG*IGCRRA
Trigger: TGCCCTTCTGCAGCCAATTCATCCCCATGGAGATAA...AAGGCCCTGTATGTCAGTGACAAGCTCCAGGCAGGCACTGTGTTTGTCAACACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR TCA 90 bp CTCATCATGAATGGAGTCCTCCACAAAGAGTCGGCCTGCTGCAATGCAATTCTCCACAGACGCGGCCCCTaGCTTGAAGAAATCAGTGGA +
Preference number: 4 (lower is better)
Translates to: LIMNGVLHKESACCNAILHRRGP*LEEISG
Trigger: TCCACTGATTTCTTCAAGTCAGGGGCCGCGTCTGTG...GAGAATTGCATTGCAGCAGGCCGACTCTTTGTGGAGGACTCCATTCATGATGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR TCA 90 bp TCCGCACCTCTTCTACCACTCTCCGCACGAACTCATCATGAATGGAGTCCTCCATCACTAACAGCTGGATaGAGTCCCCAAAGGTGGATG +
Preference number: 4 (lower is better)
Translates to: SAPLLPLSARTHHEWSPPSLTAG*SPQRWM
Trigger: CATCCACCTTTGGGGACTTCATCCAGCTGTTAGTGA...TGGAGGACTCCATTCATGATGAGTTCGTGCGGAGAGTGGTAGAAGAGGTGCGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR GCA 90 bp TCTCCGCACGAACTCATCATGAATGGAGTCCTCCACAAAGAGTCGGCCTGCTGCGCTCTGTCCAATCACTaGAATCTTCATGGTAGCAGG +
Preference number: 4 (lower is better)
Translates to: SPHELIMNGVLHKESACCALSNH*NLHGSR
Trigger: CCTGCTACCATGAAGATTGCAGTGATTGGACAGAGC...GCAGCAGGCCGACTCTTTGTGGAGGACTCCATTCATGATGAGTTCGTGCGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR GCA 90 bp GTTGACAAACACAGTGCCTGCCTGGAGCTTGTCACTGACATACAGGGCCTTGTTCAAAGCCTGTCCTTTTaGACGCCACCGGGAGTACTT +
Preference number: 4 (lower is better)
Translates to: VDKHSACLELVTDIQGLVQSLSF*TPPGVL
Trigger: AAGTACTCCCGGTGGCGTGCAAAAGGACAGGCTTTG...AACAAGGCCCTGTATGTCAGTGACAAGCTCCAGGCAGGCACTGTGTTTGTCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR GCA 90 bp GTTGCCCACCTTCATCTTCCGCACCTCTTCTACCACTCTCCGCACGAACTCATCCAAAGCCTGGTATTTTaGCACCACATCAGGCAAAGC +
Preference number: 4 (lower is better)
Translates to: VAHLHLPHLFYHSPHELIQSLVF*HHIRQS
Trigger: GCTTTGCCTGATGTGGTGGCAAAATACCAGGCTTTG...GATGAGTTCGTGCGGAGAGTGGTAGAAGAGGTGCGGAAGATGAAGGTGGGCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR GCA 90 bp CTCTCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGAGGCCAGGATCATTTTaGCATCCTCCAGCTGAATAT +
Preference number: 4 (lower is better)
Translates to: LSSEALFSLGGAHLTQPRRPGSF*HPPAEY
Trigger: ATATTCAGCTGGAGGATGGCAAAATGATCCTGGCCT...CCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp TCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGTCCCCAAAGGTGGATaGCATGTACACATCTTCATT +
Preference number: 4 (lower is better)
Translates to: SSEALFSLGGAHLTQPRAVPKGG*HVHIFI
Trigger: AATGAAGATGTGTACATGGCATCCACCTTTGGGGAC...AGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp CTCTCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGAGTGCGCTTGTTCACTaGCATTTCCACGTAGTCAAT +
Preference number: 4 (lower is better)
Translates to: LSSEALFSLGGAHLTQPRSALVH*HFHVVN
Trigger: ATTGACTACGTGGAAATGGCAGTGAACAAGCGCACT...CCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000455064.6
ENST00000472186.5
CDS-3UTR GCA 90 bp CCGAGAGATGATCATGACAGGCCCGAAGGACTCCTCCTTGGCTATGAACATGTGCCACACCTTTGGGAATaGCGGCCTTTAATGTCAGCT +
Preference number: 4 (lower is better)
Translates to: PRDDHDRPEGLLLGYEHVPHLWE*RPLMSA
Trigger: AGCTGACATTAAAGGCCGGCATTCCCAAAGGTGTGG...CACATGTTCATAGCCAAGGAGGAGTCCTTCGGGCCTGTCATGATCATCTCTCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR GCA 90 bp CCTAGATCTTTGCCAAATCCAGACTGTTTGAATCCTCCGAAGGGAGCGGCCACGCACAAAGAGTCGGCCTaGTGCAATGCAATTCTCTCC +
Preference number: 4 (lower is better)
Translates to: PRSLPNPDCLNPPKGAATHKESA*CNAILS
Trigger: GGAGAGAATTGCATTGCAGCAGGCCGACTCTTTGTG...CGTGGCCGCTCCCTTCGGAGGATTCAAACAGTCTGGATTTGGCAAAGATCTAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp CTCCTTGGCTATGAACATGTGGTCTTCCACGTCTGTGAAAACAGTTGGCTCAAACCCCCAATGAAGAGCTaGTGGGGCATGCGGACAGTG +
Preference number: 4 (lower is better)
Translates to: LLGYEHVVFHVCENSWLKPPMKS*WGMRTV
Trigger: CACTGTCCGCATGCCCCACCAGCTCTTCATTGGGGG...TTTGAGCCAACTGTTTTCACAGACGTGGAAGACCACATGTTCATAGCCAAGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp CTGTCCCCAATAACTTTGGGCTCTCTGCCTTCCACTCTTCAATACCCAAGGAACTGGGCCAGGGATACCTaGCAGATGACACTTCCATCG +
Preference number: 4 (lower is better)
Translates to: LSPITLGSLPSTLQYPRNWARDT*QMTLPS
Trigger: CGATGGAAGTGTCATCTGCCAGGTATCCCTGGCCCA...GTTCCTTGGGTATTGAAGAGTGGAAGGCAGAGAGCCCAAAGTTATTGGGGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR CCA 90 bp GTCCCCAATAACTTTGGGCTCTCTGCCTTCCACTCTTCAATACCCAAGGAACACTCTCAAAGGCATCCTTaGCTGCGGCCACTGCCTTGT +
Preference number: 4 (lower is better)
Translates to: VPNNFGLSAFHSSIPKEHSQRHP*LRPLPC
Trigger: ACAAGGCAGTGGCCGCAGCCAAGGATGCCTTTGAGA...GTGTTCCTTGGGTATTGAAGAGTGGAAGGCAGAGAGCCCAAAGTTATTGGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR CCA 90 bp GGACTCCTCCTTGGCTATGAACATGTGGTCTTCCACGTCTGTGAAAACAGTTGGCTTCAAGGCTGTGAGTaGGGTCACCTGAGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: GLLLGYEHVVFHVCENSWLQGCE*GHLSRL
Trigger: AAGCCTGCTCAGGTGACCCCACTCACAGCCTTGAAG...CCAACTGTTTTCACAGACGTGGAAGACCACATGTTCATAGCCAAGGAGGAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp TCTTCAGAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTCGAACTCATCATGAATaGAGTCCTCCACAAAGAGTC +
Preference number: 4 (lower is better)
Translates to: SSEALFSLGGAHLTQPRARTHHE*SPPQRV
Trigger: GACTCTTTGTGGAGGACTCCATTCATGATGAGTTCG...AGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTCTGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273450.7
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GTTGACAAACACAGTGCCTGCCTGGAGCTTGTCACTGACATACAGGGCCTTGTTTTATCTCCATGGGGATaGATTGGCTGCAGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: VDKHSACLELVTDIQGLVLSPWG*IGCRRA
Trigger: TGCCCTTCTGCAGCCAATTCATCCCCATGGAGATAA...AACAAGGCCCTGTATGTCAGTGACAAGCTCCAGGCAGGCACTGTGTTTGTCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR TCA 90 bp ATGCCGGCCTTTAATGTCAGCTCTGCAAACTTCAAGGCTGTGAGTGGGGTCACCCCTTTCTTATCTCCGTaGATGAGGGTCCAGTTGATG +
Preference number: 4 (lower is better)
Translates to: MPAFNVSSANFKAVSGVTPFLSP*MRVQLM
Trigger: CATCAACTGGACCCTCATTCACGGAGATAAGAAAGG...GGTGACCCCACTCACAGCCTTGAAGTTTGCAGAGCTGACATTAAAGGCCGGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR GCA 90 bp TCCAGGGACACCTTCTTCACGTTACTTATGGCACAGCTTTTCATGATGTGCTTGACCTCACACTCCTTCTaGAGCAGCAGGTCTCCGGTG +
Preference number: 4 (lower is better)
Translates to: SRDTFFTLLMAQLFMMCLTSHSF*SSRSPV
Trigger: CACCGGAGACCTGCTGCTGCAGAAGGAGTGTGAGGT...CAAGCACATCATGAAAAGCTGTGCCATAAGTAACGTGAAGAAGGTGTCCCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455064.6
CDS-3UTR GCA 90 bp ACACTTCTTTGTATTCAGTTCTCTGTTAGAGCCTCTGGTGTGATGTTTGGGCCCAAAGGCATCCTTGGCTaGGGCCACTGCCTTGTCGAC +
Preference number: 4 (lower is better)
Translates to: TLLCIQFSVRASGVMFGPKGILG*GHCLVD
Trigger: GTCGACAAGGCAGTGGCCGCAGCCAAGGATGCCTTT...GGGCCCAAACATCACACCAGAGGCTCTAACAGAGAACTGAATACAAAGAAGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR CCA 90 bp AGGCCTGAAGTGTTCAGCGTTGAGTTGAAAAATGTCAGTTTCTGTTCACAGGCCATGGCCTCTGCCGGCTaGTCCCAGTTGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: RPEVFSVELKNVSFCSQAMASAG*SQLILA
Trigger: AGCCAAGATCAACTGGGACCAGCCGGCAGAGGCCAT...GGCCTGTGAACAGAAACTGACATTTTTCAACTCAACGCTGAACACTTCAGGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473607.5
ENST00000493803.5
CDS-3UTR CCA 90 bp AAGACCTTTCTTCAGTATTCGAAGGTCACTGTCTTGACCCGCAGGTACTCGTTCCAACCTCCAGGACTTTaGGGAGGATCCGCTGCCAAA +
Preference number: 4 (lower is better)
Translates to: KTFLQYSKVTVLTRRYSFQPPGL*GGSAAK
Trigger: TTTGGCAGCGGATCCTCCCCAAAGTCCTGGAGGTTG...GAACGAGTACCTGCGGGTCAAGACAGTGACCTTCGAATACTGAAGAAAGGTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp TCTTCCACGTCTGTGAAAACAGTTGGCTCAAAGAAGAACCCTGGCCGAGGGACCTTCCTCACTAACAGCTaGATGAAGTCCCCAAAGGTG +
Preference number: 4 (lower is better)
Translates to: SSTSVKTVGSKKNPGRGTFLTNS*MKSPKV
Trigger: CACCTTTGGGGACTTCATCCAGCTGTTAGTGAGGAA...GGTCCCTCGGCCAGGGTTCTTCTTTGAGCCAACTGTTTTCACAGACGTGGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR CCA 90 bp GCAGGGACTTTCTTCTCACAAAGACCTTTCTTCAGTATTCGAAGGTCACTGTCTTCGACGTCGGTGACTTaGGCCAGGGATACCTGGCAG +
Preference number: 4 (lower is better)
Translates to: AGTFFSQRPFFSIRRSLSSTSVT*ARDTWQ
Trigger: CTGCCAGGTATCCCTGGCCCAAGTCACCGACGTCGA...AGACAGTGACCTTCGAATACTGAAGAAAGGTCTTTGTGAGAAGAAAGTCCCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR CAA 72 bp CGAGAGATGATCATGACAGGCCCGAAGGACTCCTCCTaGGCTATGAACATGTGGTCTTCCACGTCTGTGAAA +
Preference number: 4 (lower is better)
Translates to: REMIMTGPKDSS*AMNMWSSTSVK
Trigger: TTTCACAGACGTGGAAGACCACATGTTCATAGCCAAGGAGGAGTCCTTCGGGCCTGTCATGATCATCTCTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
3UTR CAA 72 bp ACAAAGACCTTTCTTCAGTATTCGAAGGTCACTGTCTaGACCCGCAGGTACTCGTTCAGAGCCGCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: TKTFLQYSKVTV*TRRYSFRAASP
Trigger: AGGAGAGGCGGCTCTGAACGAGTACCTGCGGGTCAAGACAGTGACCTTCGAATACTGAAGAAAGGTCTTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR TCA 90 bp GAAGCTTTATTCTCCCTGGGAGGGGCACACCTCACCCAGCCAAGGGCTGCTTCTTGTTCAGCGTTGAGTTaGAAAATGTCAGTTTCTGTT +
Preference number: 4 (lower is better)
Translates to: EALFSLGGAHLTQPRAASCSALS*KMSVSV
Trigger: AACAGAAACTGACATTTTTCAACTCAACGCTGAACA...AGAAGCAGCCCTTGGCTGGGTGAGGTGTGCCCCTCCCAGGGAGAATAAAGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp GCTGCTTCTGACTGGACAGAGGGCGTCCAAGATGCAGACATGGTGTGCAGGCAGTGTTCAGCGTTGAGTTaGAAAATGTCAGTTTCTGTT +
Preference number: 4 (lower is better)
Translates to: AASDWTEGVQDADMVCRQCSALS*KMSVSV
Trigger: AACAGAAACTGACATTTTTCAACTCAACGCTGAACA...CTGCCTGCACACCATGTCTGCATCTTGGACGCCCTCTGTCCAGTCAGAAGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273450.7
ENST00000393431.6
ENST00000393434.7
ENST00000452905.6
ENST00000455064.6
ENST00000472186.5
CDS-3UTR TCA 90 bp CCAAATTCCGTGGCATTGGCCCGAGACAGCACGGCATCCAAGTCCCCATCAGCATGTTCAGCGTTGAGTTaGAAAATGTCAGTTTCTGTT +
Preference number: 4 (lower is better)
Translates to: PNSVALARDSTASKSPSACSALS*KMSVSV
Trigger: AACAGAAACTGACATTTTTCAACTCAACGCTGAACA...TGCTGATGGGGACTTGGATGCCGTGCTGTCTCGGGCCAATGCCACGGAATTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR TCA 90 bp TCCATTCTCAAAGGCATCCTTGGCTGCGGCCACTGCCTTGTCGACGTCGGTGACTGTTCAGCGTTGAGTTaGAAAATGTCAGTTTCTGTT +
Preference number: 4 (lower is better)
Translates to: SILKGILGCGHCLVDVGDCSALS*KMSVSV
Trigger: AACAGAAACTGACATTTTTCAACTCAACGCTGAACA...GTCACCGACGTCGACAAGGCAGTGGCCGCAGCCAAGGATGCCTTTGAGAATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473607.5
CDS-3UTR TCA 90 bp GGACTCCTCCTTGGCTATGAACATGTGGTCTTCCACGTCTGTGAAAACAGTTGGACTCCTCCTTGGCTATaGACATGTGGTCTTCCACGT +
Preference number: 4 (lower is better)
Translates to: GLLLGYEHVVFHVCENSWTPPWL*TCGLPR
Trigger: ACGTGGAAGACCACATGTTCATAGCCAAGGAGGAGT...CCAACTGTTTTCACAGACGTGGAAGACCACATGTTCATAGCCAAGGAGGAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393431.6
ENST00000455064.6
CDS-3UTR TCA 90 bp GCAGGGACTTTCTTCTCACAAA