Pregenerated sensors for ALDH1A1 (Homo sapiens)
Ensembl gene IDs: ENSG00000165092Ensembl transcript IDs: ENST00000297785.8, ENST00000376939.5, ENST00000419959.5, ENST00000446946.1, ENST00000482210.5, ENST00000493113.1, ENST00000493311.1
Found 104 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR-3UTR TCA 90 bp | TTTACTCTGCAGTTAACGTGTATGTTAAGTACTTCAAGAGTCACTAAGGGAAAGGAGATGCTTAGCTATTaGAGAGCTTCTCTCCACTCT | + |
Preference number: 2 (lower is better) Translates to: FTLQLTCMLSTSRVTKGKEMLSY*RASLHS Trigger: AGAGTGGAGAGAAGCTCTTCAATAGCTAAGCATCTC...CTTTCCCTTAGTGACTCTTGAAGTACTTAACATACACGTTAACTGCAGAGTAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297785.8 |
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3UTR-3UTR GCA 90 bp | GGAAACTTTTCAAAACAGTCCAAGGACTTTATAACTACTGGGAACAGAGCAATTGTGACTGTAAGGAGATaGTTAGCTATTGAAGAGCTT | + |
Preference number: 2 (lower is better) Translates to: GNFSKQSKDFITTGNRAIVTVRR*LAIEEL Trigger: AAGCTCTTCAATAGCTAAGCATCTCCTTACAGTCAC...AATTGCTCTGTTCCCAGTAGTTATAAAGTCCTTGGACTGTTTTGAAAAGTTTCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000297785.8 |
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3UTR-3UTR GCA 90 bp | TTTTCAAAACAGTCCAAGGACTTTATAACTACTGGGAACAGAGCAATTTACTCTGGGAAAGAAGCTAAATaGAACTGTTCCTTTTCTATA | + |
Preference number: 2 (lower is better) Translates to: FSKQSKDFITTGNRAIYSGKEAK*NCSFSI Trigger: TATAGAAAAGGAACAGTTGCATTTAGCTTCTTTCCC...AGAGTAAATTGCTCTGTTCCCAGTAGTTATAAAGTCCTTGGACTGTTTTGAAAA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000297785.8 |
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CDS-3UTR TCA 90 bp | CCCGCTCAACACTCCTTCGAACAAACTCATCATAAATTGATTCTTCCACAAAAACACGGGGATCCAATCTaGAAAGCCTGTCTTGCGGCC | + |
Preference number: 4 (lower is better) Translates to: PAQHSFEQTHHKLILPQKHGDPI*KACLAA Trigger: GGCCGCAAGACAGGCTTTTCAGATTGGATCCCCGTG...TTTTTGTGGAAGAATCAATTTATGATGAGTTTGTTCGAAGGAGTGTTGAGCGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000376939.5 |
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CDS-3UTR TCA 90 bp | TTTACTCTGCAGTTAACGTGTATGTTAAGTACTTCAAGAGTCACTAAGGGAAAGCACGGGGATCCAATCTaGAAAGCCTGTCTTGCGGCC | + |
Preference number: 4 (lower is better) Translates to: FTLQLTCMLSTSRVTKGKHGDPI*KACLAA Trigger: GGCCGCAAGACAGGCTTTTCAGATTGGATCCCCGTG...CTTTCCCTTAGTGACTCTTGAAGTACTTAACATACACGTTAACTGCAGAGTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297785.8 |
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CDS-3UTR TCA 90 bp | GCTCAACACTCCTTCGAACAAACTCATCATAAATTGATTCTTCCACAAAAATCCCCACGTGGAGAGCAGTaGGAGGAGTTTGCTCTGCTG | + |
Preference number: 4 (lower is better) Translates to: AQHSFEQTHHKLILPQKSPRGEQ*EEFALL Trigger: CAGCAGAGCAAACTCCTCTCACTGCTCTCCACGTGG...GGATTTTTGTGGAAGAATCAATTTATGATGAGTTTGTTCGAAGGAGTGTTGAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000376939.5 |
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CDS-3UTR TCA 90 bp | TTTACTCTGCAGTTAACGTGTATGTTAAGTACTTCAAGAGTCACTAAGGGAAAGTCTGAGGGCCTTGAGTaGCTCCTGGGGTCAGAGGAT | + |
Preference number: 4 (lower is better) Translates to: FTLQLTCMLSTSRVTKGKSEGLE*LLGSED Trigger: ATCCTCTGACCCCAGGAGTCACTCAAGGCCCTCAGA...CTTTCCCTTAGTGACTCTTGAAGTACTTAACATACACGTTAACTGCAGAGTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297785.8 |
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CDS-3UTR TCA 90 bp | TCCTTCGAACAAACTCATCATAAATTGATTCTTCCACAAAAATCCTGGATGCGGCTCCTGGAACACAGGTaGCTGGCTCAGCAATTTGGT | + |
Preference number: 4 (lower is better) Translates to: SFEQTHHKLILPQKSWMRLLEHR*LAQQFG Trigger: ACCAAATTGCTGAGCCAGTCACCTGTGTTCCAGGAG...CCGCATCCAGGATTTTTGTGGAAGAATCAATTTATGATGAGTTTGTTCGAAGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000376939.5 |
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CDS-3UTR TCA 90 bp | TTTTCAAAACAGTCCAAGGACTTTATAACTACTGGGAACAGAGCAATTTACTCTCCACGTGGAGAGCAGTaGGAGGAGTTTGCTCTGCTG | + |
Preference number: 4 (lower is better) Translates to: FSKQSKDFITTGNRAIYSPRGEQ*EEFALL Trigger: CAGCAGAGCAAACTCCTCTCACTGCTCTCCACGTGG...AGAGTAAATTGCTCTGTTCCCAGTAGTTATAAAGTCCTTGGACTGTTTTGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000297785.8 |
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CDS-3UTR TCA 90 bp | AAACAGTCCAAGGACTTTATAACTACTGGGAACAGAGCAATTTACTCTGCAGTTTCCCGGCAGCTTCTTTaGTCAACTTGCCAACCTCTG | + |
Preference number: 4 (lower is better) Translates to: KQSKDFITTGNRAIYSAVSRQLL*STCQPL Trigger: CAGAGGTTGGCAAGTTGATCAAAGAAGCTGCCGGGA...AACTGCAGAGTAAATTGCTCTGTTCCCAGTAGTTATAAAGTCCTTGGACTGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297785.8 |
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CDS-3UTR GCA 90 bp | TTTACTCTGCAGTTAACGTGTATGTTAAGTACTTCAAGAGTCACTAAGGGAAAGCACCCACACTGTTCCTaGCTGCAGAGCAGAGGAGAT | + |
Preference number: 4 (lower is better) Translates to: FTLQLTCMLSTSRVTKGKHPHCS*LQSRGD Trigger: ATCTCCTCTGCTCTGCAGGCAGGAACAGTGTGGGTG...CTTTCCCTTAGTGACTCTTGAAGTACTTAACATACACGTTAACTGCAGAGTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297785.8 |
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CDS-3UTR CCA 90 bp | TCCTTCGAACAAACTCATCATAAATTGATTCTTCCACAAAAATCCTGGATGCGGGGTATTGTACGGCCCTaGATCTTGTCAGCCCAACCT | + |
Preference number: 4 (lower is better) Translates to: SFEQTHHKLILPQKSWMRGIVRP*ILSAQP Trigger: AGGTTGGGCTGACAAGATCCAGGGCCGTACAATACC...CCGCATCCAGGATTTTTGTGGAAGAATCAATTTATGATGAGTTTGTTCGAAGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000376939.5 |
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CDS-3UTR TCA 90 bp | GAGCAATTTACTCTGCAGTTAACGTGTATGTTAAGTACTTCAAGAGTCACTAAGCTCCTGGAACACAGGTaGCTGGCTCAGCAATTTGGT | + |
Preference number: 4 (lower is better) Translates to: EQFTLQLTCMLSTSRVTKLLEHR*LAQQFG Trigger: ACCAAATTGCTGAGCCAGTCACCTGTGTTCCAGGAG...CTTAGTGACTCTTGAAGTACTTAACATACACGTTAACTGCAGAGTAAATTGCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297785.8 |
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CDS-3UTR GCA 90 bp | TCCTTCGAACAAACTCATCATAAATTGATTCTTCCACAAAAATCCTGGATGCGGGCAGTGAGAGGAGTTTaGTCTGCTGGTTTGACAACC | + |
Preference number: 4 (lower is better) Translates to: SFEQTHHKLILPQKSWMRAVRGV*SAGLTT Trigger: GGTTGTCAAACCAGCAGAGCAAACTCCTCTCACTGC...CCGCATCCAGGATTTTTGTGGAAGAATCAATTTATGATGAGTTTGTTCGAAGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000376939.5 |
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CDS-3UTR GCA 90 bp | TTTTCAAAACAGTCCAAGGACTTTATAACTACTGGGAACAGAGCAATTTACTCTAGAAATGGCTGCCCCTaGTGTAGGCCCATAACCAGG | + |
Preference number: 4 (lower is better) Translates to: FSKQSKDFITTGNRAIYSRNGCP*CRPITR Trigger: CCTGGTTATGGGCCTACAGCAGGGGCAGCCATTTCT...AGAGTAAATTGCTCTGTTCCCAGTAGTTATAAAGTCCTTGGACTGTTTTGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000297785.8 |
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CDS-3UTR GCA 90 bp | TTTACTCTGCAGTTAACGTGTATGTTAAGTACTTCAAGAGTCACTAAGGGAAAGGTGAGAAGAAATGGCTaGCCCTGCTGTAGGCCCATA | + |
Preference number: 4 (lower is better) Translates to: FTLQLTCMLSTSRVTKGKVRRNG*PCCRPI Trigger: TATGGGCCTACAGCAGGGGCAGCCATTTCTTCTCAC...CTTTCCCTTAGTGACTCTTGAAGTACTTAACATACACGTTAACTGCAGAGTAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297785.8 |
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CDS-3UTR CCA 90 bp | TTTACTCTGCAGTTAACGTGTATGTTAAGTACTTCAAGAGTCACTAAGGGAAAGGGTATTGTACGGCCCTaGATCTTGTCAGCCCAACCT | + |
Preference number: 4 (lower is better) Translates to: FTLQLTCMLSTSRVTKGKGIVRP*ILSAQP Trigger: AGGTTGGGCTGACAAGATCCAGGGCCGTACAATACC...CTTTCCCTTAGTGACTCTTGAAGTACTTAACATACACGTTAACTGCAGAGTAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297785.8 |
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CDS-3UTR TCA 90 bp | CCCGCTCAACACTCCTTCGAACAAACTCATCATAAATTGATTCTTCCACAAAAATTTTCCACCATTCATTaGCTCCATTGTCGCCAGCAG | + |
Preference number: 4 (lower is better) Translates to: PAQHSFEQTHHKLILPQKFSTIH*LHCRQQ Trigger: CTGCTGGCGACAATGGAGTCAATGAATGGTGGAAAA...TTTTTGTGGAAGAATCAATTTATGATGAGTTTGTTCGAAGGAGTGTTGAGCGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000376939.5 |
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CDS-3UTR GCA 90 bp | GGAAACTTTTCAAAACAGTCCAAGGACTTTATAACTACTGGGAACAGAGCAATTCAGGTAAGTCTGGCGTaGCTGAGGATGACATTTCTG | + |
Preference number: 4 (lower is better) Translates to: GNFSKQSKDFITTGNRAIQVSLA*LRMTFL Trigger: CAGAAATGTCATCCTCAGGCACGCCAGACTTACCTG...AATTGCTCTGTTCCCAGTAGTTATAAAGTCCTTGGACTGTTTTGAAAAGTTTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000297785.8 |
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CDS-3UTR GCA 90 bp | GCTCAACACTCCTTCGAACAAACTCATCATAAATTGATTCTTCCACAAAAATCCCAGGTAAGTCTGGCGTaGCTGAGGATGACATTTCTG | + |
Preference number: 4 (lower is better) Translates to: AQHSFEQTHHKLILPQKSQVSLA*LRMTFL Trigger: CAGAAATGTCATCCTCAGGCACGCCAGACTTACCTG...GGATTTTTGTGGAAGAATCAATTTATGATGAGTTTGTTCGAAGGAGTGTTGAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000376939.5 |
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CDS-3UTR GCA 90 bp | CCCGCTCAACACTCCTTCGAACAAACTCATCATAAATTGATTCTTCCACAAAAAGTTTCCACAGCTCAGTaGAGGCCCTATCTTCCAAAT | + |
Preference number: 4 (lower is better) Translates to: PAQHSFEQTHHKLILPQKVSTAQ*RPYLPN Trigger: ATTTGGAAGATAGGGCCTGCACTGAGCTGTGGAAAC...TTTTTGTGGAAGAATCAATTTATGATGAGTTTGTTCGAAGGAGTGTTGAGCGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000376939.5 |
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CDS-3UTR GCA 90 bp | TTTACTCTGCAGTTAACGTGTATGTTAAGTACTTCAAGAGTCACTAAGGGAAAGCACACTGTTCCTGCCTaGAGAGCAGAGGAGATTGTT | + |
Preference number: 4 (lower is better) Translates to: FTLQLTCMLSTSRVTKGKHTVPA*RAEEIV Trigger: AACAATCTCCTCTGCTCTGCAGGCAGGAACAGTGTG...CTTTCCCTTAGTGACTCTTGAAGTACTTAACATACACGTTAACTGCAGAGTAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297785.8 |
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CDS-3UTR CCA 90 bp | TCCTTCGAACAAACTCATCATAAATTGATTCTTCCACAAAAATCCTGGATGCGGTGGAACACAGGTGACTaGCTCAGCAATTTGGTTCTG | + |
Preference number: 4 (lower is better) Translates to: SFEQTHHKLILPQKSWMRWNTGD*LSNLVL Trigger: CAGAACCAAATTGCTGAGCCAGTCACCTGTGTTCCA...CCGCATCCAGGATTTTTGTGGAAGAATCAATTTATGATGAGTTTGTTCGAAGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000376939.5 |
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CDS-3UTR CCA 90 bp | TTTTCAAAACAGTCCAAGGACTTTATAACTACTGGGAACAGAGCAATTTACTCTGCCTTGAGTGACTCCTaGGGTCAGAGGATTTCCAAG | + |
Preference number: 4 (lower is better) Translates to: FSKQSKDFITTGNRAIYSALSDS*GQRISK Trigger: CTTGGAAATCCTCTGACCCCAGGAGTCACTCAAGGC...AGAGTAAATTGCTCTGTTCCCAGTAGTTATAAAGTCCTTGGACTGTTTTGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000297785.8 |
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CDS-3UTR TCA 90 bp | AAACAGTCCAAGGACTTTATAACTACTGGGAACAGAGCAATTTACTCTGCAGTTTTGTCTATATCCATGTaGGAAGAAATGGCTGCCCCT | + |
Preference number: 4 (lower is better) Translates to: KQSKDFITTGNRAIYSAVLSISM*EEMAAP Trigger: AGGGGCAGCCATTTCTTCTCACATGGATATAGACAA...AACTGCAGAGTAAATTGCTCTGTTCCCAGTAGTTATAAAGTCCTTGGACTGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000297785.8 |
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CDS-3UTR TCA 90 bp | GGAAACTTTTCAAAACAGTCCAAGGACTTTATAACTACTGGGAACAGAGCAATTCTTGCCAACCTCTGTTaGTCCTGTGAAGGCTACTTT | + |
Preference number: 4 (lower is better) Translates to: GNFSKQSKDFITTGNRAILANLC*SCEGYF Trigger: AAAGTAGCCTTCACAGGATCAACAGAGGTTGGCAAG...AATTGCTCTGTTCCCAGTAGTTATAAAGTCCTTGGACTGTTTTGAAAAGTTTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000297785.8 |
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CDS-3UTR TCA 90 bp | AAACAGTCCAAGGACTTTATAACTACTGGGAACAGAGCAATTTACTCTGCAGTTGAGATGCTTAGCTATTaGAGAGCTTCTCTCCACTCT | + |
Preference number: 4 (lower is better) Translates to: KQSKDFITTGNRAIYSAVEMLSY*RASLHS Trigger: AGAGTGGAGAGAAGCTCTTCAATAGCTAAGCATCTC...AACTGCAGAGTAAATTGCTCTGTTCCCAGTAGTTATAAAGTCCTTGGACTGTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297785.8 |
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CDS-3UTR GCA 90 bp | GAGCAATTTACTCTGCAGTTAACGTGTATGTTAAGTACTTCAAGAGTCACTAAGCTTGTCAGCCCAACCTaGACAGTAGCGCAATGTTTT | + |
Preference number: 4 (lower is better) Translates to: EQFTLQLTCMLSTSRVTKLVSPT*TVAQCF Trigger: AAAACATTGCGCTACTGTGCAGGTTGGGCTGACAAG...CTTAGTGACTCTTGAAGTACTTAACATACACGTTAACTGCAGAGTAAATTGCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297785.8 |
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CDS-3UTR GCA 90 bp | TTTACTCTGCAGTTAACGTGTATGTTAAGTACTTCAAGAGTCACTAAGGGAAAGGTTTCCACAGCTCAGTaGAGGCCCTATCTTCCAAAT | + |
Preference number: 4 (lower is better) Translates to: FTLQLTCMLSTSRVTKGKVSTAQ*RPYLPN Trigger: ATTTGGAAGATAGGGCCTGCACTGAGCTGTGGAAAC...CTTTCCCTTAGTGACTCTTGAAGTACTTAACATACACGTTAACTGCAGAGTAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297785.8 |
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CDS-3UTR GCA 90 bp | TTTTCAAAACAGTCCAAGGACTTTATAACTACTGGGAACAGAGCAATTTACTCTGCAGTGAGAGGAGTTTaGTCTGCTGGTTTGACAACC | + |
Preference number: 4 (lower is better) Translates to: FSKQSKDFITTGNRAIYSAVRGV*SAGLTT Trigger: GGTTGTCAAACCAGCAGAGCAAACTCCTCTCACTGC...AGAGTAAATTGCTCTGTTCCCAGTAGTTATAAAGTCCTTGGACTGTTTTGAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000297785.8 |
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CDS-3UTR GCA 90 bp | GAGCAATTTACTCTGCAGTTAACGTGTATGTTAAGTACTTCAAGAGTCACTAAGCACAAAAATCCTGGATaGGGCTATACAACACTGGCC | + |
Preference number: 4 (lower is better) Translates to: EQFTLQLTCMLSTSRVTKHKNPG*GYTTLA Trigger: GGCCAGTGTTGTATAGCCGCATCCAGGATTTTTGTG...CTTAGTGACTCTTGAAGTACTTAACATACACGTTAACTGCAGAGTAAATTGCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000297785.8 |
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CDS-3UTR GCA 90 bp | CACTCCTTCGAACAAACTCATCATAAATTGATTCTTCCACAAAAATCCTGGATGCACAAAAATCCTGGATaGGGCTATACAACACTGGCC | + |
Preference number: 4 (lower is better) Translates to: HSFEQTHHKLILPQKSWMHKNPG*GYTTLA Trigger: GGCCAGTGTTGTATAGCCGCATCCAGGATTTTTGTG...CATCCAGGATTTTTGTGGAAGAATCAATTTATGATGAGTTTGTTCGAAGGAGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000376939.5 |
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CDS-3UTR CCA 90 bp | GGAAACTTTTCAAAACAGTCCAAGGACTTTATAACTACTGGGAACAGAGCAATTTGGAACACAGGTGACTaGCTCAGCAATTTGGTTCTG | + |
Preference number: 4 (lower is better) Translates to: GNFSKQSKDFITTGNRAIWNTGD*LSNLVL Trigger: CAGAACCAAATTGCTGAGCCAGTCACCTGTGTTCCA...AATTGCTCTGTTCCCAGTAGTTATAAAGTCCTTGGACTGTTTTGAAAAGTTTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000297785.8 |
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CDS-3UTR TCA 90 bp | TTTACTCTGCAGTTAACGTGTATGTTAAGTACTTCAAGAGTCACTAAGGGAAAGGAATCTTCAAATCGGTaGGTAGGACAGGTAAGTCTG | + |
Preference number: 4 (lower is better) Translates to: FTLQLTCMLSTSRVTKGKESSNR*VGQVSL Trigger: CAGACTTACCTGTCCTACTCACCGATTTGAAGATTC...CTTTCCCTTAGTGACTCTTGAAGTACTTAACATACACGTTAACTGCAGAGTAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297785.8 |
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CDS-3UTR TCA 90 bp | GCTCAACACTCCTTCGAACAAACTCATCATAAATTGATTCTTCCACAAAAATCCGAATCTTCAAATCGGTaGGTAGGACAGGTAAGTCTG | + |
Preference number: 4 (lower is better) Translates to: AQHSFEQTHHKLILPQKSESSNR*VGQVSL Trigger: CAGACTTACCTGTCCTACTCACCGATTTGAAGATTC...GGATTTTTGTGGAAGAATCAATTTATGATGAGTTTGTTCGAAGGAGTGTTGAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000376939.5 |
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CDS-3UTR TCA 90 bp | TTTTCAAAACAGTCCAAGGACTTTATAACTACTGGGAACAGAGCAATTTACTCTTTTTCCACCATTCATTaGCTCCATTGTCGCCAGCAG | + |
Preference number: 4 (lower is better) Translates to: FSKQSKDFITTGNRAIYSFSTIH*LHCRQQ Trigger: CTGCTGGCGACAATGGAGTCAATGAATGGTGGAAAA...AGAGTAAATTGCTCTGTTCCCAGTAGTTATAAAGTCCTTGGACTGTTTTGAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000297785.8 |
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CDS-3UTR TCA 90 bp | CCCGCTCAACACTCCTTCGAACAAACTCATCATAAATTGATTCTTCCACAAAAAAGTAGCGCAATGTTTTaGTGCAGCCTGCTAAATCAT | + |
Preference number: 4 (lower is better) Translates to: PAQHSFEQTHHKLILPQKSSAMF*CSLLNH Trigger: ATGATTTAGCAGGCTGCATCAAAACATTGCGCTACT...TTTTTGTGGAAGAATCAATTTATGATGAGTTTGTTCGAAGGAGTGTTGAGCGGG 40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000376939.5 |
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CDS-3UTR GCA 90 bp | GGAAACTTTTCAAAACAGTCCAAGGACTTTATAACTACTGGGAACAGAGCAATTCATCAGCTAACACAATaGAAGGGCTCTTTCCTCCAA | + |
Preference number: 4 (lower is better) Translates to: GNFSKQSKDFITTGNRAIHQLTQ*KGSFLQ Trigger: TTGGAGGAAAGAGCCCTTGCATTGTGTTAGCTGATG...AATTGCTCTGTTCCCAGTAGTTATAAAGTCCTTGGACTGTTTTGAAAAGTTTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000297785.8 |
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CDS-3UTR GCA 90 bp | AAACAGTCCAAGGACTTTATAACTACTGGGAACAGAGCAATTTACTCTGCAGTTGAATACCCCATGGTGTaGAAATTCAACAGCATTGTC | + |
Preference number: 4 (lower is better) Translates to: KQSKDFITTGNRAIYSAVEYPMV*KFNSIV Trigger: GACAATGCTGTTGAATTTGCACACCATGGGGTATTC...AACTGCAGAGTAAATTGCTCTGTTCCCAGTAGTTATAAAGTCCTTGGACTGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297785.8 |
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CDS-3UTR CCA 90 bp | GAGCAATTTACTCTGCAGTTAACGTGTATGTTAAGTACTTCAAGAGTCACTAAGAGGAGTTTGCTCTGCTaGTTTGACAACCACTGTGTT | + |
Preference number: 4 (lower is better) Translates to: EQFTLQLTCMLSTSRVTKRSLLC*FDNHCV Trigger: AACACAGTGGTTGTCAAACCAGCAGAGCAAACTCCT...CTTAGTGACTCTTGAAGTACTTAACATACACGTTAACTGCAGAGTAAATTGCTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297785.8 |
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CDS-3UTR CCA 90 bp | CACTCCTTCGAACAAACTCATCATAAATTGATTCTTCCACAAAAATCCTGGATGAGGAGTTTGCTCTGCTaGTTTGACAACCACTGTGTT | + |
Preference number: 4 (lower is better) Translates to: HSFEQTHHKLILPQKSWMRSLLC*FDNHCV Trigger: AACACAGTGGTTGTCAAACCAGCAGAGCAAACTCCT...CATCCAGGATTTTTGTGGAAGAATCAATTTATGATGAGTTTGTTCGAAGGAGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000376939.5 |
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CDS-3UTR CCA 90 bp | GGAAACTTTTCAAAACAGTCCAAGGACTTTATAACTACTGGGAACAGAGCAATTATTAAAGATGCCACGTaGAGAGCAGTGAGAGGAGTT | + |
Preference number: 4 (lower is better) Translates to: GNFSKQSKDFITTGNRAIIKDAT*RAVRGV Trigger: AACTCCTCTCACTGCTCTCCACGTGGCATCTTTAAT...AATTGCTCTGTTCCCAGTAGTTATAAAGTCCTTGGACTGTTTTGAAAAGTTTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000297785.8 |
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CDS-3UTR CCA 90 bp | GCTCAACACTCCTTCGAACAAACTCATCATAAATTGATTCTTCCACAAAAATCCATTAAAGATGCCACGTaGAGAGCAGTGAGAGGAGTT | + |
Preference number: 4 (lower is better) Translates to: AQHSFEQTHHKLILPQKSIKDAT*RAVRGV Trigger: AACTCCTCTCACTGCTCTCCACGTGGCATCTTTAAT...GGATTTTTGTGGAAGAATCAATTTATGATGAGTTTGTTCGAAGGAGTGTTGAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000376939.5 |
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CDS-3UTR TCA 90 bp | AAACAGTCCAAGGACTTTATAACTACTGGGAACAGAGCAATTTACTCTGCAGTTTTTCTTGCCACTCACTaGATCATGCCATTCATTGTT | + |
Preference number: 4 (lower is better) Translates to: KQSKDFITTGNRAIYSAVFLATH*IMPFIV Trigger: AACAATGAATGGCATGATTCAGTGAGTGGCAAGAAA...AACTGCAGAGTAAATTGCTCTGTTCCCAGTAGTTATAAAGTCCTTGGACTGTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000297785.8 |
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CDS-3UTR TCA 90 bp | GGAAACTTTTCAAAACAGTCCAAGGACTTTATAACTACTGGGAACAGAGCAATTAGTAGCGCAATGTTTTaGTGCAGCCTGCTAAATCAT | + |
Preference number: 4 (lower is better) Translates to: GNFSKQSKDFITTGNRAISSAMF*CSLLNH Trigger: ATGATTTAGCAGGCTGCATCAAAACATTGCGCTACT...AATTGCTCTGTTCCCAGTAGTTATAAAGTCCTTGGACTGTTTTGAAAAGTTTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000297785.8 |
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CDS-3UTR TCA 90 bp | GAGCAATTTACTCTGCAGTTAACGTGTATGTTAAGTACTTCAAGAGTCACTAAGGGAAATTCCAAGGAATaGTTTGGCCACATACACCAA | + |
Preference number: 4 (lower is better) Translates to: EQFTLQLTCMLSTSRVTKGNSKE*FGHIHQ Trigger: TTGGTGTATGTGGCCAAATCATTCCTTGGAATTTCC...CTTAGTGACTCTTGAAGTACTTAACATACACGTTAACTGCAGAGTAAATTGCTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297785.8 |
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CDS-3UTR TCA 90 bp | CAACACTCCTTCGAACAAACTCATCATAAATTGATTCTTCCACAAAAATCCTGGGGAAATTCCAAGGAATaGTTTGGCCACATACACCAA | + |
Preference number: 4 (lower is better) Translates to: QHSFEQTHHKLILPQKSWGNSKE*FGHIHQ Trigger: TTGGTGTATGTGGCCAAATCATTCCTTGGAATTTCC...CCAGGATTTTTGTGGAAGAATCAATTTATGATGAGTTTGTTCGAAGGAGTGTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000376939.5 |
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CDS-3UTR GCA 90 bp | GAGCAATTTACTCTGCAGTTAACGTGTATGTTAAGTACTTCAAGAGTCACTAAGAGACAGGAAATTTCTTaGCACTCACTGAATCATGCC | + |
Preference number: 4 (lower is better) Translates to: EQFTLQLTCMLSTSRVTKRQEIS*HSLNHA Trigger: GGCATGATTCAGTGAGTGGCAAGAAATTTCCTGTCT...CTTAGTGACTCTTGAAGTACTTAACATACACGTTAACTGCAGAGTAAATTGCTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297785.8 |
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CDS-3UTR GCA 90 bp | CAACACTCCTTCGAACAAACTCATCATAAATTGATTCTTCCACAAAAATCCTGGAGACAGGAAATTTCTTaGCACTCACTGAATCATGCC | + |
Preference number: 4 (lower is better) Translates to: QHSFEQTHHKLILPQKSWRQEIS*HSLNHA Trigger: GGCATGATTCAGTGAGTGGCAAGAAATTTCCTGTCT...CCAGGATTTTTGTGGAAGAATCAATTTATGATGAGTTTGTTCGAAGGAGTGTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000376939.5 |
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CDS-3UTR CCA 90 bp | GGAAACTTTTCAAAACAGTCCAAGGACTTTATAACTACTGGGAACAGAGCAATTACCTCTGTATATTCATaGAAACCGTACTCTCCCAGT | + |
Preference number: 4 (lower is better) Translates to: GNFSKQSKDFITTGNRAITSVYS*KPYSPS Trigger: ACTGGGAGAGTACGGTTTCCATGAATATACAGAGGT...AATTGCTCTGTTCCCAGTAGTTATAAAGTCCTTGGACTGTTTTGAAAAGTTTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000297785.8 |
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CDS-3UTR TCA 90 bp | TTTTCAAAACAGTCCAAGGACTTTATAACTACTGGGAACAGAGCAATTTACTCTCCTCTGTTGATCCTGTaGAGGCTACTTTGTCTATAT | + |
Preference number: 4 (lower is better) Translates to: FSKQSKDFITTGNRAIYSPLLIL*RLLCLY Trigger: ATATAGACAAAGTAGCCTTCACAGGATCAACAGAGG...AGAGTAAATTGCTCTGTTCCCAGTAGTTATAAAGTCCTTGGACTGTTTTGAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000297785.8 |
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CDS-3UTR TCA 90 bp | AAACAGTCCAAGGACTTTATAACTACTGGGAACAGAGCAATTTACTCTGCAGTTCTTTATGAGTTCTTCTaGGAGATTTTCACTGTGACT | + |
Preference number: 4 (lower is better) Translates to: KQSKDFITTGNRAIYSAVLYEFF*EIFTVT Trigger: AGTCACAGTGAAAATCTCTCAGAAGAACTCATAAAG...AACTGCAGAGTAAATTGCTCTGTTCCCAGTAGTTATAAAGTCCTTGGACTGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297785.8 |
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CDS-3UTR TCA 90 bp | GGAAACTTTTCAAAACAGTCCAAGGACTTTATAACTACTGGGAACAGAGCAATTTTTGACAAGCAGACATaGCATCCTAGGAAACTTTTC | + |
Preference number: 4 (lower is better) Translates to: GNFSKQSKDFITTGNRAIFDKQT*HPRKLF Trigger: GAAAAGTTTCCTAGGATGTCATGTCTGCTTGTCAAA...AATTGCTCTGTTCCCAGTAGTTATAAAGTCCTTGGACTGTTTTGAAAAGTTTCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000297785.8 |
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CDS-3UTR TCA 90 bp | GAGCAATTTACTCTGCAGTTAACGTGTATGTTAAGTACTTCAAGAGTCACTAAGAGGGATTATTTCTTTTaGCAAGCAGACATGACATCC | + |
Preference number: 4 (lower is better) Translates to: EQFTLQLTCMLSTSRVTKRDYFF*QADMTS Trigger: GGATGTCATGTCTGCTTGTCAAAAGAAATAATCCCT...CTTAGTGACTCTTGAAGTACTTAACATACACGTTAACTGCAGAGTAAATTGCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297785.8 |
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CDS-3UTR GCA 90 bp | GGAAACTTTTCAAAACAGTCCAAGGACTTTATAACTACTGGGAACAGAGCAATTAACTTCATGATTTGCTaGACTGGTCCAAAAATCTCC | + |
Preference number: 4 (lower is better) Translates to: GNFSKQSKDFITTGNRAINFMIC*TGPKIS Trigger: GGAGATTTTTGGACCAGTGCAGCAAATCATGAAGTT...AATTGCTCTGTTCCCAGTAGTTATAAAGTCCTTGGACTGTTTTGAAAAGTTTCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000297785.8 |
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CDS-3UTR CCA 90 bp | TTTACTCTGCAGTTAACGTGTATGTTAAGTACTTCAAGAGTCACTAAGGGAAAGTTCCAAGGAATGATTTaGCCACATACACCAATAGGT | + |
Preference number: 4 (lower is better) Translates to: FTLQLTCMLSTSRVTKGKFQGMI*PHTPIG Trigger: ACCTATTGGTGTATGTGGCCAAATCATTCCTTGGAA...CTTTCCCTTAGTGACTCTTGAAGTACTTAACATACACGTTAACTGCAGAGTAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297785.8 |
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CDS-3UTR CCA 90 bp | GCTCAACACTCCTTCGAACAAACTCATCATAAATTGATTCTTCCACAAAAATCCTTCCAAGGAATGATTTaGCCACATACACCAATAGGT | + |
Preference number: 4 (lower is better) Translates to: AQHSFEQTHHKLILPQKSFQGMI*PHTPIG Trigger: ACCTATTGGTGTATGTGGCCAAATCATTCCTTGGAA...GGATTTTTGTGGAAGAATCAATTTATGATGAGTTTGTTCGAAGGAGTGTTGAGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000376939.5 |
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CDS-3UTR CCA 90 bp | GGAAACTTTTCAAAACAGTCCAAGGACTTTATAACTACTGGGAACAGAGCAATTCATGATTTGCTGCACTaGTCCAAAAATCTCCTCTTT | + |
Preference number: 4 (lower is better) Translates to: GNFSKQSKDFITTGNRAIHDLLH*SKNLLF Trigger: AAAGAGGAGATTTTTGGACCAGTGCAGCAAATCATG...AATTGCTCTGTTCCCAGTAGTTATAAAGTCCTTGGACTGTTTTGAAAAGTTTCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000297785.8 |
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CDS-3UTR GCA 90 bp | TTTTCAAAACAGTCCAAGGACTTTATAACTACTGGGAACAGAGCAATTTACTCTGTGACTGTAAGGAGATaGTTAGCTATTGAAGAGCTT | + |
Preference number: 4 (lower is better) Translates to: FSKQSKDFITTGNRAIYSVTVRR*LAIEEL Trigger: AAGCTCTTCAATAGCTAAGCATCTCCTTACAGTCAC...AGAGTAAATTGCTCTGTTCCCAGTAGTTATAAAGTCCTTGGACTGTTTTGAAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000297785.8 |
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CDS-3UTR CCA 90 bp | TTTACTCTGCAGTTAACGTGTATGTTAAGTACTTCAAGAGTCACTAAGGGAAAGAAAATTTCCATCAATTaGTATTGTACGGCCCTGGAT | + |
Preference number: 4 (lower is better) Translates to: FTLQLTCMLSTSRVTKGKKISIN*YCTALD Trigger: ATCCAGGGCCGTACAATACCAATTGATGGAAATTTT...CTTTCCCTTAGTGACTCTTGAAGTACTTAACATACACGTTAACTGCAGAGTAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297785.8 |
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CDS-3UTR CCA 90 bp | GAGCAATTTACTCTGCAGTTAACGTGTATGTTAAGTACTTCAAGAGTCACTAAGGGACTTTATAACTACTaGGAACAGAGCAATTTACTC | + |
Preference number: 4 (lower is better) Translates to: EQFTLQLTCMLSTSRVTKGLYNY*EQSNLL Trigger: GAGTAAATTGCTCTGTTCCCAGTAGTTATAAAGTCC...CTTAGTGACTCTTGAAGTACTTAACATACACGTTAACTGCAGAGTAAATTGCTC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297785.8 |
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CDS-3UTR CCA 90 bp | TTTTCAAAACAGTCCAAGGACTTTATAACTACTGGGAACAGAGCAATTTACTCTCAGAGGAGATTGTTATaGCTTTATCAATGTCTTTGG | + |
Preference number: 4 (lower is better) Translates to: FSKQSKDFITTGNRAIYSQRRLL*LYQCLW Trigger: CCAAAGACATTGATAAAGCCATAACAATCTCCTCTG...AGAGTAAATTGCTCTGTTCCCAGTAGTTATAAAGTCCTTGGACTGTTTTGAAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000297785.8 |
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CDS GCA 90 bp | CTGGCGTGCCTGAGGATGACATTTCTGATTCGGCTCCTCCTGCAATaGTGTGAAGGAGAAAGCTGTAGGTTCCCTGGGAGTCTGCAGATC | + |
Preference number: 5 (lower is better) Translates to: LACLRMTFLIRLLLQ*CEGESCRFPGSLQI Trigger: GATCTGCAGACTCCCAGGGAACCTACAGCTTTCTCCTTCACAGCATTGCAGGAGGAGCCGAATCAGAAATGTCATCCTCAGGCACGCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419959.5 |
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CDS GCA 90 bp | GCCTCTTTTATTAAAGATGCCACGTGGAGAGCAGTGAGAGGAGTTTaGTCTGCTGGTTTGACAACCACTGTGTTTCCACAGCTCAGTGCA | + |
Preference number: 5 (lower is better) Translates to: ASFIKDATWRAVRGV*SAGLTTTVFPQLSA Trigger: TGCACTGAGCTGTGGAAACACAGTGGTTGTCAAACCAGCAGAGCAAACTCCTCTCACTGCTCTCCACGTGGCATCTTTAATAAAAGAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000297785.8 ENST00000376939.5 ENST00000419959.5 ENST00000482210.5 |
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CDS-3UTR CAA 90 bp | GAGCAATTTACTCTGCAGTTAACGTGTATGTTAAGTACTTCAAGAGTCACTAAGGTACGGCCCTGGATCTaGTCAGCCCAACCTGCACAG | + |
Preference number: 5 (lower is better) Translates to: EQFTLQLTCMLSTSRVTKVRPWI*SAQPAQ Trigger: CTGTGCAGGTTGGGCTGACAAGATCCAGGGCCGTAC...CTTAGTGACTCTTGAAGTACTTAACATACACGTTAACTGCAGAGTAAATTGCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297785.8 |
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CDS-3UTR CAA 90 bp | CACTCCTTCGAACAAACTCATCATAAATTGATTCTTCCACAAAAATCCTGGATGGTACGGCCCTGGATCTaGTCAGCCCAACCTGCACAG | + |
Preference number: 5 (lower is better) Translates to: HSFEQTHHKLILPQKSWMVRPWI*SAQPAQ Trigger: CTGTGCAGGTTGGGCTGACAAGATCCAGGGCCGTAC...CATCCAGGATTTTTGTGGAAGAATCAATTTATGATGAGTTTGTTCGAAGGAGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000376939.5 |
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CDS GCA 90 bp | TCCTGTAGTGGTCAGGGCTTGATGTCTCCAGTGACTGGCAGAGACTaGATTCTTATGCACTCAGCAGACAGTAAATATGTTATACAGTCT | + |
Preference number: 5 (lower is better) Translates to: SCSGQGLMSPVTGRD*ILMHSADSKYVIQS Trigger: AGACTGTATAACATATTTACTGTCTGCTGAGTGCATAAGAATGCAGTCTCTGCCAGTCACTGGAGACATCAAGCCCTGACCACTACAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000493311.1 |
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CDS-3UTR CAA 90 bp | TTTACTCTGCAGTTAACGTGTATGTTAAGTACTTCAAGAGTCACTAAGGGAAAGGTCAATCTGAGGGCCTaGAGTGACTCCTGGGGTCAG | + |
Preference number: 5 (lower is better) Translates to: FTLQLTCMLSTSRVTKGKVNLRA*SDSWGQ Trigger: CTGACCCCAGGAGTCACTCAAGGCCCTCAGATTGAC...CTTTCCCTTAGTGACTCTTGAAGTACTTAACATACACGTTAACTGCAGAGTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297785.8 |
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CDS-3UTR CAA 90 bp | TCCTTCGAACAAACTCATCATAAATTGATTCTTCCACAAAAATCCTGGATGCGGTCTGAAAAGCCTGTCTaGCGGCCTTCACTGCCTTGT | + |
Preference number: 5 (lower is better) Translates to: SFEQTHHKLILPQKSWMRSEKPV*RPSLPC Trigger: ACAAGGCAGTGAAGGCCGCAAGACAGGCTTTTCAGA...CCGCATCCAGGATTTTTGTGGAAGAATCAATTTATGATGAGTTTGTTCGAAGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000376939.5 |
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CDS-3UTR CAA 90 bp | AAACAGTCCAAGGACTTTATAACTACTGGGAACAGAGCAATTTACTCTGCAGTTGTCACCCTCTTCAGATaGCTTTTCCCGGCAGCTTCT | + |
Preference number: 5 (lower is better) Translates to: KQSKDFITTGNRAIYSAVVTLFR*LFPAAS Trigger: AGAAGCTGCCGGGAAAAGCAATCTGAAGAGGGTGAC...AACTGCAGAGTAAATTGCTCTGTTCCCAGTAGTTATAAAGTCCTTGGACTGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297785.8 |
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CDS-3UTR CAA 90 bp | GGAAACTTTTCAAAACAGTCCAAGGACTTTATAACTACTGGGAACAGAGCAATTTCTGAAAAGCCTGTCTaGCGGCCTTCACTGCCTTGT | + |
Preference number: 5 (lower is better) Translates to: GNFSKQSKDFITTGNRAISEKPV*RPSLPC Trigger: ACAAGGCAGTGAAGGCCGCAAGACAGGCTTTTCAGA...AATTGCTCTGTTCCCAGTAGTTATAAAGTCCTTGGACTGTTTTGAAAAGTTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000297785.8 |
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CDS-3UTR CAA 90 bp | TCCTTCGAACAAACTCATCATAAATTGATTCTTCCACAAAAATCCTGGATGCGGAGCAGTGAGAGGAGTTaGCTCTGCTGGTTTGACAAC | + |
Preference number: 5 (lower is better) Translates to: SFEQTHHKLILPQKSWMRSSERS*LCWFDN Trigger: GTTGTCAAACCAGCAGAGCAAACTCCTCTCACTGCT...CCGCATCCAGGATTTTTGTGGAAGAATCAATTTATGATGAGTTTGTTCGAAGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000376939.5 |
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CDS-3UTR CAA 90 bp | GGAAACTTTTCAAAACAGTCCAAGGACTTTATAACTACTGGGAACAGAGCAATTAGCAGTGAGAGGAGTTaGCTCTGCTGGTTTGACAAC | + |
Preference number: 5 (lower is better) Translates to: GNFSKQSKDFITTGNRAISSERS*LCWFDN Trigger: GTTGTCAAACCAGCAGAGCAAACTCCTCTCACTGCT...AATTGCTCTGTTCCCAGTAGTTATAAAGTCCTTGGACTGTTTTGAAAAGTTTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000297785.8 |
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CDS-3UTR CAA 90 bp | GGAAACTTTTCAAAACAGTCCAAGGACTTTATAACTACTGGGAACAGAGCAATTTTCCCGGCAGCTTCTTaGATCAACTTGCCAACCTCT | + |
Preference number: 5 (lower is better) Translates to: GNFSKQSKDFITTGNRAIFPAAS*INLPTS Trigger: AGAGGTTGGCAAGTTGATCAAAGAAGCTGCCGGGAA...AATTGCTCTGTTCCCAGTAGTTATAAAGTCCTTGGACTGTTTTGAAAAGTTTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000297785.8 |
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CDS-3UTR CAA 90 bp | TTTACTCTGCAGTTAACGTGTATGTTAAGTACTTCAAGAGTCACTAAGGGAAAGGTTTTCCACCATTCATaGACTCCATTGTCGCCAGCA | + |
Preference number: 5 (lower is better) Translates to: FTLQLTCMLSTSRVTKGKVFHHS*TPLSPA Trigger: TGCTGGCGACAATGGAGTCAATGAATGGTGGAAAAC...CTTTCCCTTAGTGACTCTTGAAGTACTTAACATACACGTTAACTGCAGAGTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297785.8 |
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CDS-3UTR CAA 90 bp | CACTCCTTCGAACAAACTCATCATAAATTGATTCTTCCACAAAAATCCTGGATGGTTTTCCACCATTCATaGACTCCATTGTCGCCAGCA | + |
Preference number: 5 (lower is better) Translates to: HSFEQTHHKLILPQKSWMVFHHS*TPLSPA Trigger: TGCTGGCGACAATGGAGTCAATGAATGGTGGAAAAC...CATCCAGGATTTTTGTGGAAGAATCAATTTATGATGAGTTTGTTCGAAGGAGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000376939.5 |
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CDS-3UTR CAA 90 bp | GCTCAACACTCCTTCGAACAAACTCATCATAAATTGATTCTTCCACAAAAATCCGTTTGCTCTGCTGGTTaGACAACCACTGTGTTTCCA | + |
Preference number: 5 (lower is better) Translates to: AQHSFEQTHHKLILPQKSVCSAG*TTTVFP Trigger: TGGAAACACAGTGGTTGTCAAACCAGCAGAGCAAAC...GGATTTTTGTGGAAGAATCAATTTATGATGAGTTTGTTCGAAGGAGTGTTGAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000376939.5 |
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CDS-3UTR CAA 90 bp | TTTACTCTGCAGTTAACGTGTATGTTAAGTACTTCAAGAGTCACTAAGGGAAAGGCAAATTCAACAGCATaGTCCAAGTCGGCATCAGCT | + |
Preference number: 5 (lower is better) Translates to: FTLQLTCMLSTSRVTKGKANSTA*SKSASA Trigger: AGCTGATGCCGACTTGGACAATGCTGTTGAATTTGC...CTTTCCCTTAGTGACTCTTGAAGTACTTAACATACACGTTAACTGCAGAGTAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297785.8 |
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CDS-3UTR CAA 90 bp | AAACAGTCCAAGGACTTTATAACTACTGGGAACAGAGCAATTTACTCTGCAGTTCCAAAAATCTCCTCTTaGGCAATGCGCATCTCATCT | + |
Preference number: 5 (lower is better) Translates to: KQSKDFITTGNRAIYSAVPKISS*AMRISS Trigger: AGATGAGATGCGCATTGCCAAAGAGGAGATTTTTGG...AACTGCAGAGTAAATTGCTCTGTTCCCAGTAGTTATAAAGTCCTTGGACTGTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000297785.8 |
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CDS-3UTR CAA 90 bp | AAACAGTCCAAGGACTTTATAACTACTGGGAACAGAGCAATTTACTCTGCAGTTAAGACAGGAAATTTCTaGCCACTCACTGAATCATGC | + |
Preference number: 5 (lower is better) Translates to: KQSKDFITTGNRAIYSAVKTGNF*PLTESC Trigger: GCATGATTCAGTGAGTGGCAAGAAATTTCCTGTCTT...AACTGCAGAGTAAATTGCTCTGTTCCCAGTAGTTATAAAGTCCTTGGACTGTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297785.8 |
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CDS-3UTR CAA 90 bp | AAACAGTCCAAGGACTTTATAACTACTGGGAACAGAGCAATTTACTCTGCAGTTATTAAATCAGCCAACTaGTATAATAGTCGCCCCCTC | + |
Preference number: 5 (lower is better) Translates to: KQSKDFITTGNRAIYSAVIKSAN*YNSRPL Trigger: GAGGGGGCGACTATTATACAAGTTGGCTGATTTAAT...AACTGCAGAGTAAATTGCTCTGTTCCCAGTAGTTATAAAGTCCTTGGACTGTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000297785.8 |
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CDS-3UTR CAA 90 bp | GAGCAATTTACTCTGCAGTTAACGTGTATGTTAAGTACTTCAAGAGTCACTAAGTTCCATCAATTGGTATaGTACGGCCCTGGATCTTGT | + |
Preference number: 5 (lower is better) Translates to: EQFTLQLTCMLSTSRVTKFHQLV*YGPGSC Trigger: ACAAGATCCAGGGCCGTACAATACCAATTGATGGAA...CTTAGTGACTCTTGAAGTACTTAACATACACGTTAACTGCAGAGTAAATTGCTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297785.8 |
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CDS-3UTR CAA 90 bp | CACTCCTTCGAACAAACTCATCATAAATTGATTCTTCCACAAAAATCCTGGATGTTCCATCAATTGGTATaGTACGGCCCTGGATCTTGT | + |
Preference number: 5 (lower is better) Translates to: HSFEQTHHKLILPQKSWMFHQLV*YGPGSC Trigger: ACAAGATCCAGGGCCGTACAATACCAATTGATGGAA...CATCCAGGATTTTTGTGGAAGAATCAATTTATGATGAGTTTGTTCGAAGGAGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000376939.5 |
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CDS-3UTR CAA 90 bp | TTTTCAAAACAGTCCAAGGACTTTATAACTACTGGGAACAGAGCAATTTACTCTGTTTGCTCTGCTGGTTaGACAACCACTGTGTTTCCA | + |
Preference number: 5 (lower is better) Translates to: FSKQSKDFITTGNRAIYSVCSAG*TTTVFP Trigger: TGGAAACACAGTGGTTGTCAAACCAGCAGAGCAAAC...AGAGTAAATTGCTCTGTTCCCAGTAGTTATAAAGTCCTTGGACTGTTTTGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000297785.8 |
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CDS-3UTR CAA 90 bp | GAGCAATTTACTCTGCAGTTAACGTGTATGTTAAGTACTTCAAGAGTCACTAAGGCTTCTTTGATCAACTaGCCAACCTCTGTTGATCCT | + |
Preference number: 5 (lower is better) Translates to: EQFTLQLTCMLSTSRVTKASLIN*PTSVDP Trigger: AGGATCAACAGAGGTTGGCAAGTTGATCAAAGAAGC...CTTAGTGACTCTTGAAGTACTTAACATACACGTTAACTGCAGAGTAAATTGCTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297785.8 |
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CDS-3UTR CAA 90 bp | CACTCCTTCGAACAAACTCATCATAAATTGATTCTTCCACAAAAATCCTGGATGAAGACAGGAAATTTCTaGCCACTCACTGAATCATGC | + |
Preference number: 5 (lower is better) Translates to: HSFEQTHHKLILPQKSWMKTGNF*PLTESC Trigger: GCATGATTCAGTGAGTGGCAAGAAATTTCCTGTCTT...CATCCAGGATTTTTGTGGAAGAATCAATTTATGATGAGTTTGTTCGAAGGAGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000376939.5 |
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CDS-3UTR CAA 90 bp | GGAAACTTTTCAAAACAGTCCAAGGACTTTATAACTACTGGGAACAGAGCAATTATTCCAAGGAATGATTaGGCCACATACACCAATAGG | + |
Preference number: 5 (lower is better) Translates to: GNFSKQSKDFITTGNRAIIPRND*ATYTNR Trigger: CCTATTGGTGTATGTGGCCAAATCATTCCTTGGAAT...AATTGCTCTGTTCCCAGTAGTTATAAAGTCCTTGGACTGTTTTGAAAAGTTTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000297785.8 |
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CDS-3UTR CAA 90 bp | CACTCCTTCGAACAAACTCATCATAAATTGATTCTTCCACAAAAATCCTGGATGATTCCAAGGAATGATTaGGCCACATACACCAATAGG | + |
Preference number: 5 (lower is better) Translates to: HSFEQTHHKLILPQKSWMIPRND*ATYTNR Trigger: CCTATTGGTGTATGTGGCCAAATCATTCCTTGGAAT...CATCCAGGATTTTTGTGGAAGAATCAATTTATGATGAGTTTGTTCGAAGGAGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000376939.5 |
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CDS-3UTR CAA 90 bp | GGAAACTTTTCAAAACAGTCCAAGGACTTTATAACTACTGGGAACAGAGCAATTAAAAATTTCCATCAATaGGTATTGTACGGCCCTGGA | + |
Preference number: 5 (lower is better) Translates to: GNFSKQSKDFITTGNRAIKNFHQ*VLYGPG Trigger: TCCAGGGCCGTACAATACCAATTGATGGAAATTTTT...AATTGCTCTGTTCCCAGTAGTTATAAAGTCCTTGGACTGTTTTGAAAAGTTTCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000297785.8 |
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CDS-3UTR CAA 90 bp | CACTCCTTCGAACAAACTCATCATAAATTGATTCTTCCACAAAAATCCTGGATGAAAAATTTCCATCAATaGGTATTGTACGGCCCTGGA | + |
Preference number: 5 (lower is better) Translates to: HSFEQTHHKLILPQKSWMKNFHQ*VLYGPG Trigger: TCCAGGGCCGTACAATACCAATTGATGGAAATTTTT...CATCCAGGATTTTTGTGGAAGAATCAATTTATGATGAGTTTGTTCGAAGGAGTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000376939.5 |
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CDS-3UTR CAA 90 bp | GGAAACTTTTCAAAACAGTCCAAGGACTTTATAACTACTGGGAACAGAGCAATTGCTTTATCAATGTCTTaGGTAAACACTCCTGCTGAT | + |
Preference number: 5 (lower is better) Translates to: GNFSKQSKDFITTGNRAIALSMS*VNTPAD Trigger: ATCAGCAGGAGTGTTTACCAAAGACATTGATAAAGC...AATTGCTCTGTTCCCAGTAGTTATAAAGTCCTTGGACTGTTTTGAAAAGTTTCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000297785.8 |
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CDS-3UTR CAA 90 bp | GGAAACTTTTCAAAACAGTCCAAGGACTTTATAACTACTGGGAACAGAGCAATTTTCACTGTGACTGTTTaGACCTCTGTATATTCATGG | + |
Preference number: 5 (lower is better) Translates to: GNFSKQSKDFITTGNRAIFTVTV*TSVYSW Trigger: CCATGAATATACAGAGGTCAAAACAGTCACAGTGAA...AATTGCTCTGTTCCCAGTAGTTATAAAGTCCTTGGACTGTTTTGAAAAGTTTCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000297785.8 |
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CDS GCA 72 bp | AGATGCCACGTGGAGAGCAGTGAGAGGAGTTTGCTCTaGTGGTTTGACAACCACTGTGTTTCCACAGCTCAG | + |
Preference number: 6 (lower is better) Translates to: RCHVESSERSLL*WFDNHCVSTAQ Trigger: CTGAGCTGTGGAAACACAGTGGTTGTCAAACCAGCAGAGCAAACTCCTCTCACTGCTCTCCACGTGGCATCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000297785.8 ENST00000376939.5 ENST00000419959.5 ENST00000482210.5 |
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CDS GCA 72 bp | ACAACACTGGCCCTGGTGGTAGAATACCCCATGGTGTaGAAATTCAACAGCATTGTCCAAGTCGGCATCAGC | + |
Preference number: 6 (lower is better) Translates to: TTLALVVEYPMV*KFNSIVQVGIS Trigger: GCTGATGCCGACTTGGACAATGCTGTTGAATTTGCACACCATGGGGTATTCTACCACCAGGGCCAGTGTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297785.8 |
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CDS GCA 72 bp | CTGAGGATGACATTTCTGATTCGGCTCCTCCTGCAATaGTGTGAAGGAGAAAGCTGTAGGTTCCCTGGGAGT | + |
Preference number: 6 (lower is better) Translates to: LRMTFLIRLLLQ*CEGESCRFPGS Trigger: ACTCCCAGGGAACCTACAGCTTTCTCCTTCACAGCATTGCAGGAGGAGCCGAATCAGAAATGTCATCCTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419959.5 |
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CDS CAA 90 bp | ATTGTCGCCAGCAGCAGACGATCTCTTTCGATTAAATCAGCCAACTaGTATAATAGTCGCCCCCTCTCGGAAGCATCCATAGTACGCCAC | + |
Preference number: 6 (lower is better) Translates to: IVASSRRSLSIKSAN*YNSRPLSEASIVRH Trigger: GTGGCGTACTATGGATGCTTCCGAGAGGGGGCGACTATTATACAAGTTGGCTGATTTAATCGAAAGAGATCGTCTGCTGCTGGCGACAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000297785.8 ENST00000376939.5 ENST00000419959.5 ENST00000446946.1 ENST00000482210.5 ENST00000493113.1 |
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CDS GCA 72 bp | ATTAAAGATGCCACGTGGAGAGCAGTGAGAGGAGTTTaGTCTGCTGGTTTGACAACCACTGTGTTTCCACAG | + |
Preference number: 6 (lower is better) Translates to: IKDATWRAVRGV*SAGLTTTVFPQ Trigger: CTGTGGAAACACAGTGGTTGTCAAACCAGCAGAGCAAACTCCTCTCACTGCTCTCCACGTGGCATCTTTAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000297785.8 ENST00000376939.5 ENST00000419959.5 ENST00000482210.5 |
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CDS CCA 72 bp | TTGTTCCTTGTCAATCTGAGGGCCTTGAGTGACTCCTaGGGTCAGAGGATTTCCAAGGATATACTTCTTAGC | + |
Preference number: 6 (lower is better) Translates to: LFLVNLRALSDS*GQRISKDILLS Trigger: GCTAAGAAGTATATCCTTGGAAATCCTCTGACCCCAGGAGTCACTCAAGGCCCTCAGATTGACAAGGAACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297785.8 |
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CDS TCA 72 bp | TCTTGTCAGCCCAACCTGCACAGTAGCGCAATGTTTTaGTGCAGCCTGCTAAATCATTCAGATATGCATTGG | + |
Preference number: 6 (lower is better) Translates to: SCQPNLHSSAMF*CSLLNHSDMHW Trigger: CCAATGCATATCTGAATGATTTAGCAGGCTGCATCAAAACATTGCGCTACTGTGCAGGTTGGGCTGACAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000297785.8 ENST00000376939.5 ENST00000419959.5 ENST00000446946.1 ENST00000482210.5 ENST00000493113.1 |
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CDS CAA 72 bp | AGCAGCAGACGATCTCTTTCGATTAAATCAGCCAACTaGTATAATAGTCGCCCCCTCTCGGAAGCATCCATA | + |
Preference number: 6 (lower is better) Translates to: SSRRSLSIKSAN*YNSRPLSEASI Trigger: TATGGATGCTTCCGAGAGGGGGCGACTATTATACAAGTTGGCTGATTTAATCGAAAGAGATCGTCTGCTGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000297785.8 ENST00000376939.5 ENST00000419959.5 ENST00000446946.1 ENST00000482210.5 ENST00000493113.1 |
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CDS TCA 72 bp | CAGATATGCATTGGAATAGAGTTTTCCACCATTCATTaGCTCCATTGTCGCCAGCAGCAGACGATCTCTTTC | + |
Preference number: 6 (lower is better) Translates to: QICIGIEFSTIH*LHCRQQQTISF Trigger: GAAAGAGATCGTCTGCTGCTGGCGACAATGGAGTCAATGAATGGTGGAAAACTCTATTCCAATGCATATCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000297785.8 ENST00000376939.5 ENST00000419959.5 ENST00000446946.1 ENST00000482210.5 ENST00000493113.1 |
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CDS CAA 72 bp | TCAGATATGCATTGGAATAGAGTTTTCCACCATTCATaGACTCCATTGTCGCCAGCAGCAGACGATCTCTTT | + |
Preference number: 6 (lower is better) Translates to: SDMHWNRVFHHS*TPLSPAADDLF Trigger: AAAGAGATCGTCTGCTGCTGGCGACAATGGAGTCAATGAATGGTGGAAAACTCTATTCCAATGCATATCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000297785.8 ENST00000376939.5 ENST00000419959.5 ENST00000446946.1 ENST00000482210.5 ENST00000493113.1 |
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CDS CAA 72 bp | CCCGCTCAACACTCCTTCGAACAAACTCATCATAAATaGATTCTTCCACAAAAATCCTGGATGCGGCTATAC | + |
Preference number: 6 (lower is better) Translates to: PAQHSFEQTHHK*ILPQKSWMRLY Trigger: GTATAGCCGCATCCAGGATTTTTGTGGAAGAATCAATTTATGATGAGTTTGTTCGAAGGAGTGTTGAGCGGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000297785.8 ENST00000376939.5 |
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CDS TCA 72 bp | CCGCTCAACACTCCTTCGAACAAACTCATCATAAATTaGTTCTTCCACAAAAATCCTGGATGCGGCTATACA | + |
Preference number: 6 (lower is better) Translates to: PLNTPSNKLIIN*FFHKNPGCGYT Trigger: TGTATAGCCGCATCCAGGATTTTTGTGGAAGAATCAATTTATGATGAGTTTGTTCGAAGGAGTGTTGAGCGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000297785.8 ENST00000376939.5 |