RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ALDH18A1 (Homo sapiens)

Ensembl gene IDs: ENSG00000059573

Ensembl transcript IDs: ENST00000371221.3, ENST00000371224.7, ENST00000483788.1, ENST00000485428.1, ENST00000489386.1

Found 385 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TTCCTCCAGCTCAGTGGGGAACATCCTGAAACTTGCATCTCCTGCTaGAGCTTGGGTTCCAGCTGCATCACGGGGAACACAGCATCTCCT +
Preference number: 1 (lower is better)
Translates to: FLQLSGEHPETCISC*SLGSSCITGNTASP
Trigger: AGGAGATGCTGTGTTCCCCGTGATGCAGCTGGAACCCAAGCTGCAGCAGGAGATGCAAGTTTCAGGATGTTCCCCACTGAGCTGGAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
3UTR CCA 90 bp AGCTCAGTGGGGAACATCCTGAAACTTGCATCTCCTGCTGCAGCTTaGGTTCCAGCTGCATCACGGGGAACACAGCATCTCCTGGATGCA +
Preference number: 1 (lower is better)
Translates to: SSVGNILKLASPAAA*VPAASRGTQHLLDA
Trigger: TGCATCCAGGAGATGCTGTGTTCCCCGTGATGCAGCTGGAACCCAAGCTGCAGCAGGAGATGCAAGTTTCAGGATGTTCCCCACTGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
3UTR GCA 90 bp GAACATCCTGAAACTTGCATCTCCTGCTGCAGCTTGGGTTCCAGCTaGATCACGGGGAACACAGCATCTCCTGGATGCAGGAAGCTGCAA +
Preference number: 1 (lower is better)
Translates to: EHPETCISCCSLGSS*ITGNTASPGCRKLQ
Trigger: TTGCAGCTTCCTGCATCCAGGAGATGCTGTGTTCCCCGTGATGCAGCTGGAACCCAAGCTGCAGCAGGAGATGCAAGTTTCAGGATGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
3UTR GCA 90 bp ATATTCCTCCAGCTCAGTGGGGAACATCCTGAAACTTGCATCTCCTaGTGCAGCTTGGGTTCCAGCTGCATCACGGGGAACACAGCATCT +
Preference number: 1 (lower is better)
Translates to: IFLQLSGEHPETCIS*CSLGSSCITGNTAS
Trigger: AGATGCTGTGTTCCCCGTGATGCAGCTGGAACCCAAGCTGCAGCAGGAGATGCAAGTTTCAGGATGTTCCCCACTGAGCTGGAGGAATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
3UTR TCA 90 bp AGCATCACTGCTGTAGATATTCCTCCAGCTCAGTGGGGAACATCCTaGAACTTGCATCTCCTGCTGCAGCTTGGGTTCCAGCTGCATCAC +
Preference number: 1 (lower is better)
Translates to: SITAVDIPPAQWGTS*NLHLLLQLGFQLHH
Trigger: GTGATGCAGCTGGAACCCAAGCTGCAGCAGGAGATGCAAGTTTCAGGATGTTCCCCACTGAGCTGGAGGAATATCTACAGCAGTGATGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
3UTR GCA 90 bp AGCTTGGGTTCCAGCTGCATCACGGGGAACACAGCATCTCCTGGATaGAGGAAGCTGCAAGCATCTGGAATGCTTATTAATTTACCCCAC +
Preference number: 1 (lower is better)
Translates to: SLGSSCITGNTASPG*RKLQASGMLINLPH
Trigger: GTGGGGTAAATTAATAAGCATTCCAGATGCTTGCAGCTTCCTGCATCCAGGAGATGCTGTGTTCCCCGTGATGCAGCTGGAACCCAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
3UTR CAA 90 bp CAGCTCAGTGGGGAACATCCTGAAACTTGCATCTCCTGCTGCAGCTaGGGTTCCAGCTGCATCACGGGGAACACAGCATCTCCTGGATGC +
Preference number: 2 (lower is better)
Translates to: QLSGEHPETCISCCS*GSSCITGNTASPGC
Trigger: GCATCCAGGAGATGCTGTGTTCCCCGTGATGCAGCTGGAACCCAAGCTGCAGCAGGAGATGCAAGTTTCAGGATGTTCCCCACTGAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
3UTR CAA 90 bp AGGGTGAGCTGGGAGCCAGACTGTGCACATCAGCCAAGACTGCTATaGCCAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGG +
Preference number: 2 (lower is better)
Translates to: RVSWEPDCAHQPRLL*PNGAQKHPGTLSNR
Trigger: CCTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTGGCAATAGCAGTCTTGGCTGATGTGCACAGTCTGGCTCCCAGCTCACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
3UTR-3UTR TCA 90 bp GCTGCATCACGGGGAACACAGCATCTCCTGGATGCAGGAAGCTGCAAGCATCTGGAGCGGGCTCTCTCCTaGGATAAGACAAGTTTAACG +
Preference number: 2 (lower is better)
Translates to: AASRGTQHLLDAGSCKHLERALS*DKTSLT
Trigger: CGTTAAACTTGTCTTATCTCAGGAGAGAGCCCGCTC...CAGATGCTTGCAGCTTCCTGCATCCAGGAGATGCTGTGTTCCCCGTGATGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
3UTR-3UTR TCA 90 bp GAAACTTGCATCTCCTGCTGCAGCTTGGGTTCCAGCTGCATCACGGGGAACACAGGGACTGTAAGTCACTaGGGTGACACAAAGCAGCCA +
Preference number: 2 (lower is better)
Translates to: ETCISCCSLGSSCITGNTGTVSH*GDTKQP
Trigger: TGGCTGCTTTGTGTCACCTCAGTGACTTACAGTCCC...TGTGTTCCCCGTGATGCAGCTGGAACCCAAGCTGCAGCAGGAGATGCAAGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
3UTR GCA 72 bp GAAACTTGCATCTCCTGCTGCAGCTTGGGTTCCAGCTaGATCACGGGGAACACAGCATCTCCTGGATGCAGG +
Preference number: 3 (lower is better)
Translates to: ETCISCCSLGSS*ITGNTASPGCR
Trigger: CCTGCATCCAGGAGATGCTGTGTTCCCCGTGATGCAGCTGGAACCCAAGCTGCAGCAGGAGATGCAAGTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
3UTR GCA 72 bp CAGCTCAGTGGGGAACATCCTGAAACTTGCATCTCCTaGTGCAGCTTGGGTTCCAGCTGCATCACGGGGAAC +
Preference number: 3 (lower is better)
Translates to: QLSGEHPETCIS*CSLGSSCITGN
Trigger: GTTCCCCGTGATGCAGCTGGAACCCAAGCTGCAGCAGGAGATGCAAGTTTCAGGATGTTCCCCACTGAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
3UTR GCA 72 bp CTCAGTGGGGAACATCCTGAAACTTGCATCTCCTGCTaGAGCTTGGGTTCCAGCTGCATCACGGGGAACACA +
Preference number: 3 (lower is better)
Translates to: LSGEHPETCISC*SLGSSCITGNT
Trigger: TGTGTTCCCCGTGATGCAGCTGGAACCCAAGCTGCAGCAGGAGATGCAAGTTTCAGGATGTTCCCCACTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
3UTR CCA 72 bp GGGAACATCCTGAAACTTGCATCTCCTGCTGCAGCTTaGGTTCCAGCTGCATCACGGGGAACACAGCATCTC +
Preference number: 3 (lower is better)
Translates to: GNILKLASPAAA*VPAASRGTQHL
Trigger: GAGATGCTGTGTTCCCCGTGATGCAGCTGGAACCCAAGCTGCAGCAGGAGATGCAAGTTTCAGGATGTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
3UTR GCA 72 bp GGGAGCCAGACTGTGCACATCAGCCAAGACTGCTATTaGCAAACGGAGCCCAGAAGCATCCAGGTACACTTT +
Preference number: 3 (lower is better)
Translates to: GSQTVHISQDCY*QTEPRSIQVHF
Trigger: AAAGTGTACCTGGATGCTTCTGGGCTCCGTTTGGCAATAGCAGTCTTGGCTGATGTGCACAGTCTGGCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
3UTR CCA 72 bp GGGTTCCAGCTGCATCACGGGGAACACAGCATCTCCTaGATGCAGGAAGCTGCAAGCATCTGGAATGCTTAT +
Preference number: 3 (lower is better)
Translates to: GFQLHHGEHSIS*MQEAASIWNAY
Trigger: ATAAGCATTCCAGATGCTTGCAGCTTCCTGCATCCAGGAGATGCTGTGTTCCCCGTGATGCAGCTGGAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
3UTR GCA 72 bp TCCAGCTGCATCACGGGGAACACAGCATCTCCTGGATaGAGGAAGCTGCAAGCATCTGGAATGCTTATTAAT +
Preference number: 3 (lower is better)
Translates to: SSCITGNTASPG*RKLQASGMLIN
Trigger: ATTAATAAGCATTCCAGATGCTTGCAGCTTCCTGCATCCAGGAGATGCTGTGTTCCCCGTGATGCAGCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
3UTR GCA 72 bp TCACGGGGAACACAGCATCTCCTGGATGCAGGAAGCTaGAAGCATCTGGAATGCTTATTAATTTACCCCACA +
Preference number: 3 (lower is better)
Translates to: SRGTQHLLDAGS*KHLECLLIYPT
Trigger: TGTGGGGTAAATTAATAAGCATTCCAGATGCTTGCAGCTTCCTGCATCCAGGAGATGCTGTGTTCCCCGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CCA 90 bp CAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGGCAGACCCTACCAGGCCGCCTTCGCCCCCTaGCACTACCGCGGGTCCGCA +
Preference number: 4 (lower is better)
Translates to: QTEPRSIQVHFPTGRPYQAAFAP*HYRGSA
Trigger: TGCGGACCCGCGGTAGTGCCAGGGGGCGAAGGCGGC...CTGGTAGGGTCTGCCTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR TCA 90 bp GGGAGCCAGACTGTGCACATCAGCCAAGACTGCTATTGCCAAACGGAGCCCAGACACTCCACGCCGGGCTaGTTCCGGCGCTCGCTCACT +
Preference number: 4 (lower is better)
Translates to: GSQTVHISQDCYCQTEPRHSTPG*FRRSLT
Trigger: AGTGAGCGAGCGCCGGAATCAGCCCGGCGTGGAGTG...TCTGGGCTCCGTTTGGCAATAGCAGTCTTGGCTGATGTGCACAGTCTGGCTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR TCA 90 bp ACTGTGCACATCAGCCAAGACTGCTATTGCCAAACGGAGCCCAGAAGCATCCAGCACTCCACGCCGGGCTaGTTCCGGCGCTCGCTCACT +
Preference number: 4 (lower is better)
Translates to: TVHISQDCYCQTEPRSIQHSTPG*FRRSLT
Trigger: AGTGAGCGAGCGCCGGAATCAGCCCGGCGTGGAGTG...CTGGATGCTTCTGGGCTCCGTTTGGCAATAGCAGTCTTGGCTGATGTGCACAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CCA 90 bp ACTGTGCACATCAGCCAAGACTGCTATTGCCAAACGGAGCCCAGAAGCATCCAGTGGTTCTGCCCCGAGTaGAGGGCCTGCCGCACGCTC +
Preference number: 4 (lower is better)
Translates to: TVHISQDCYCQTEPRSIQWFCPE*RACRTL
Trigger: GAGCGTGCGGCAGGCCCTCCACTCGGGGCAGAACCA...CTGGATGCTTCTGGGCTCCGTTTGGCAATAGCAGTCTTGGCTGATGTGCACAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR TCA 90 bp CAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGGCAGACCCTACCAGGCCTGCCGCACGCTCTaGGACAGAAGGATCTCATGG +
Preference number: 4 (lower is better)
Translates to: QTEPRSIQVHFPTGRPYQACRTL*DRRISW
Trigger: CCATGAGATCCTTCTGTCTCAGAGCGTGCGGCAGGC...CTGGTAGGGTCTGCCTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR GCA 90 bp CCAGGTACACTTTCCAACAGGCAGACCCTACCAGGAACTGGGAGACAAGAGCGGCTGCTCAACAATAGATaGCAAGCGCCCCAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: PGTLSNRQTLPGTGRQERLLNNR*QAPQGQ
Trigger: CTGGCCCTGGGGCGCTTGGCATCTATTGTTGAGCAG...CCGCTCTTGTCTCCCAGTTCCTGGTAGGGTCTGCCTGTTGGAAAGTGTACCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR GCA 90 bp GAAACTTGCATCTCCTGCTGCAGCTTGGGTTCCAGCTGCATCACGGGGAACACATCTTTCAGCTGGTTCTaGCCCGAGTGGAGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: ETCISCCSLGSSCITGNTSFSWF*PEWRAC
Trigger: GCAGGCCCTCCACTCGGGGCAGAACCAGCTGAAAGA...TGTGTTCCCCGTGATGCAGCTGGAACCCAAGCTGCAGCAGGAGATGCAAGTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR GCA 90 bp GAAACTTGCATCTCCTGCTGCAGCTTGGGTTCCAGCTGCATCACGGGGAACACAGTCCTGGGAGGAGGCTaGGATCTGTCGCAGACCGAT +
Preference number: 4 (lower is better)
Translates to: ETCISCCSLGSSCITGNTVLGGG*DLSQTD
Trigger: ATCGGTCTGCGACAGATCGCAGCCTCCTCCCAGGAC...TGTGTTCCCCGTGATGCAGCTGGAACCCAAGCTGCAGCAGGAGATGCAAGTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR GCA 90 bp GGGAGCCAGACTGTGCACATCAGCCAAGACTGCTATTGCCAAACGGAGCCCAGAGGTGGAGAATCCGGTTaGTGTGTGCAGCCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: GSQTVHISQDCYCQTEPRGGESG*CVQPPS
Trigger: GGAAGGAGGCTGCACACAGCAACCGGATTCTCCACC...TCTGGGCTCCGTTTGGCAATAGCAGTCTTGGCTGATGTGCACAGTCTGGCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR GCA 90 bp CCAGGTACACTTTCCAACAGGCAGACCCTACCAGGAACTGGGAGACAAGAGCGGCAGATCCCTTCGCTGTaGCCCATCACTGGAATCCCC +
Preference number: 4 (lower is better)
Translates to: PGTLSNRQTLPGTGRQERQIPSL*PITGIP
Trigger: GGGGATTCCAGTGATGGGGCACAGCGAAGGGATCTG...CCGCTCTTGTCTCCCAGTTCCTGGTAGGGTCTGCCTGTTGGAAAGTGTACCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CCA 90 bp AAGACTGCTATTGCCAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGTGGTTCTGCCCCGAGTaGAGGGCCTGCCGCACGCTC +
Preference number: 4 (lower is better)
Translates to: KTAIAKRSPEASRYTFQQWFCPE*RACRTL
Trigger: GAGCGTGCGGCAGGCCCTCCACTCGGGGCAGAACCA...CTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTGGCAATAGCAGTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CCA 90 bp CGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGGCAGACCCTACCAGGAACGCCAAAGCTGCCACCTaGGGTAGACAGTCAGGACGA +
Preference number: 4 (lower is better)
Translates to: RSPEASRYTFQQADPTRNAKAAT*GRQSGR
Trigger: TCGTCCTGACTGTCTACCCCAGGTGGCAGCTTTGGC...GTTCCTGGTAGGGTCTGCCTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CCA 90 bp CCAGGTACACTTTCCAACAGGCAGACCCTACCAGGAACTGGGAGACAAGAGCGGTCTCCTGCTGCAGCTTaGGTTCCAGCTGCATCACGG +
Preference number: 4 (lower is better)
Translates to: PGTLSNRQTLPGTGRQERSPAAA*VPAASR
Trigger: CCGTGATGCAGCTGGAACCCAAGCTGCAGCAGGAGA...CCGCTCTTGTCTCCCAGTTCCTGGTAGGGTCTGCCTGTTGGAAAGTGTACCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR TCA 90 bp GGGAGCCAGACTGTGCACATCAGCCAAGACTGCTATTGCCAAACGGAGCCCAGAGCAGAAGATGTTGGTTaGAGGGCTGGAACCCACAGC +
Preference number: 4 (lower is better)
Translates to: GSQTVHISQDCYCQTEPRAEDVG*RAGTHS
Trigger: GCTGTGGGTTCCAGCCCTTCAACCAACATCTTCTGC...TCTGGGCTCCGTTTGGCAATAGCAGTCTTGGCTGATGTGCACAGTCTGGCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR TCA 90 bp CCAGGTACACTTTCCAACAGGCAGACCCTACCAGGAACTGGGAGACAAGAGCGGCTTGACTCCATGGATTaGGAGAGCCTCCTGGGTCAG +
Preference number: 4 (lower is better)
Translates to: PGTLSNRQTLPGTGRQERLDSMD*ESLLGQ
Trigger: CTGACCCAGGAGGCTCTCTCAATCCATGGAGTCAAG...CCGCTCTTGTCTCCCAGTTCCTGGTAGGGTCTGCCTGTTGGAAAGTGTACCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR GCA 90 bp GTGGGGAACATCCTGAAACTTGCATCTCCTGCTGCAGCTTGGGTTCCAGCTGCAGGCGCAAGCGTTGTTTaGCAAAGGCTACGGCTCCAC +
Preference number: 4 (lower is better)
Translates to: VGNILKLASPAAAWVPAAGASVV*QRLRLH
Trigger: GTGGAGCCGTAGCCTTTGGCAAACAACGCTTGCGCC...TGCAGCTGGAACCCAAGCTGCAGCAGGAGATGCAAGTTTCAGGATGTTCCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR GCA 90 bp GGGAGCCAGACTGTGCACATCAGCCAAGACTGCTATTGCCAAACGGAGCCCAGAACAGAAGTGCCACCTTaGAAAGCCCAGAGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: GSQTVHISQDCYCQTEPRTEVPP*KAQRAA
Trigger: AGCAGCCCTCTGGGCTTTGCAAGGTGGCACTTCTGT...TCTGGGCTCCGTTTGGCAATAGCAGTCTTGGCTGATGTGCACAGTCTGGCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR GCA 90 bp GCTGCATCACGGGGAACACAGCATCTCCTGGATGCAGGAAGCTGCAAGCATCTGACAGAAGTGCCACCTTaGAAAGCCCAGAGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: AASRGTQHLLDAGSCKHLTEVPP*KAQRAA
Trigger: AGCAGCCCTCTGGGCTTTGCAAGGTGGCACTTCTGT...CAGATGCTTGCAGCTTCCTGCATCCAGGAGATGCTGTGTTCCCCGTGATGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR GCA 90 bp GCTGCATCACGGGGAACACAGCATCTCCTGGATGCAGGAAGCTGCAAGCATCTGGCCATTTCTCCCTGCTaGTCAACAGTAGGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: AASRGTQHLLDAGSCKHLAISPC*STVGPA
Trigger: TGCAGGCCCTACTGTTGAGCAGCAGGGAGAAATGGC...CAGATGCTTGCAGCTTCCTGCATCCAGGAGATGCTGTGTTCCCCGTGATGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR GCA 90 bp GGGAGCCAGACTGTGCACATCAGCCAAGACTGCTATTGCCAAACGGAGCCCAGATTTTGGCGATTCGGGTaGGGCGCAAAACACGTCCCA +
Preference number: 4 (lower is better)
Translates to: GSQTVHISQDCYCQTEPRFWRFG*GAKHVP
Trigger: TGGGACGTGTTTTGCGCCGCACCCGAATCGCCAAAA...TCTGGGCTCCGTTTGGCAATAGCAGTCTTGGCTGATGTGCACAGTCTGGCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR GCA 90 bp CAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGGCAGACCCTACCAGGGTGGAGAATCCGGTTaGTGTGTGCAGCCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: QTEPRSIQVHFPTGRPYQGGESG*CVQPPS
Trigger: GGAAGGAGGCTGCACACAGCAACCGGATTCTCCACC...CTGGTAGGGTCTGCCTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR GCA 90 bp CGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGGCAGACCCTACCAGGAACACTTGCATCTCCTGCTaGAGCTTGGGTTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: RSPEASRYTFQQADPTRNTCISC*SLGSSC
Trigger: GCAGCTGGAACCCAAGCTGCAGCAGGAGATGCAAGT...GTTCCTGGTAGGGTCTGCCTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CCA 90 bp CCAGGTACACTTTCCAACAGGCAGACCCTACCAGGAACTGGGAGACAAGAGCGGTTCAGCTCACTGCGGTaGGCGAAGGACTTGCCATGT +
Preference number: 4 (lower is better)
Translates to: PGTLSNRQTLPGTGRQERFSSLR*AKDLPC
Trigger: ACATGGCAAGTCCTTCGCCCACCGCAGTGAGCTGAA...CCGCTCTTGTCTCCCAGTTCCTGGTAGGGTCTGCCTGTTGGAAAGTGTACCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CCA 90 bp CCAGGTACACTTTCCAACAGGCAGACCCTACCAGGAACTGGGAGACAAGAGCGGAGGCTACGGCTCCACTaGTCACCAGCATCATCTCTC +
Preference number: 4 (lower is better)
Translates to: PGTLSNRQTLPGTGRQERRLRLH*SPASSL
Trigger: GAGAGATGATGCTGGTGACCAGTGGAGCCGTAGCCT...CCGCTCTTGTCTCCCAGTTCCTGGTAGGGTCTGCCTGTTGGAAAGTGTACCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CCA 90 bp CCAGGTACACTTTCCAACAGGCAGACCCTACCAGGAACTGGGAGACAAGAGCGGGCCATTTCTTTCAGCTaGTTCTGCCCCGAGTGGAGG +
Preference number: 4 (lower is better)
Translates to: PGTLSNRQTLPGTGRQERAISFS*FCPEWR
Trigger: CCTCCACTCGGGGCAGAACCAGCTGAAAGAAATGGC...CCGCTCTTGTCTCCCAGTTCCTGGTAGGGTCTGCCTGTTGGAAAGTGTACCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CCA 90 bp CGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGGCAGACCCTACCAGGAACGCTCAGGTTCCAAGGTaGCCAACATCCTTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: RSPEASRYTFQQADPTRNAQVPR*PTSFLQ
Trigger: CTGGAGGAAGGATGTTGGCCACCTTGGAACCTGAGC...GTTCCTGGTAGGGTCTGCCTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CCA 90 bp GAAACTTGCATCTCCTGCTGCAGCTTGGGTTCCAGCTGCATCACGGGGAACACAGCCAAAGCTGCCACCTaGGGTAGACAGTCAGGACGA +
Preference number: 4 (lower is better)
Translates to: ETCISCCSLGSSCITGNTAKAAT*GRQSGR
Trigger: TCGTCCTGACTGTCTACCCCAGGTGGCAGCTTTGGC...TGTGTTCCCCGTGATGCAGCTGGAACCCAAGCTGCAGCAGGAGATGCAAGTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CCA 90 bp GAAACTTGCATCTCCTGCTGCAGCTTGGGTTCCAGCTGCATCACGGGGAACACATCCCTCAAGTCCTACTaGTCCCCGGGCGTGGATTCT +
Preference number: 4 (lower is better)
Translates to: ETCISCCSLGSSCITGNTSLKSY*SPGVDS
Trigger: AGAATCCACGCCCGGGGACCAGTAGGACTTGAGGGA...TGTGTTCCCCGTGATGCAGCTGGAACCCAAGCTGCAGCAGGAGATGCAAGTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CCA 90 bp GTGGGGAACATCCTGAAACTTGCATCTCCTGCTGCAGCTTGGGTTCCAGCTGCAGACCCTACCAGGAACTaGGAGACAAGAGCGGGCTCT +
Preference number: 4 (lower is better)
Translates to: VGNILKLASPAAAWVPAADPTRN*ETRAGS
Trigger: AGAGCCCGCTCTTGTCTCCCAGTTCCTGGTAGGGTC...TGCAGCTGGAACCCAAGCTGCAGCAGGAGATGCAAGTTTCAGGATGTTCCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CCA 90 bp GAAACTTGCATCTCCTGCTGCAGCTTGGGTTCCAGCTGCATCACGGGGAACACATCTCCTGCTGCAGCTTaGGTTCCAGCTGCATCACGG +
Preference number: 4 (lower is better)
Translates to: ETCISCCSLGSSCITGNTSPAAA*VPAASR
Trigger: CCGTGATGCAGCTGGAACCCAAGCTGCAGCAGGAGA...TGTGTTCCCCGTGATGCAGCTGGAACCCAAGCTGCAGCAGGAGATGCAAGTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR TCA 90 bp GTGGGGAACATCCTGAAACTTGCATCTCCTGCTGCAGCTTGGGTTCCAGCTGCAGTTGCACGGCCTCCTTaGCTCCATGGATTGAGAGAG +
Preference number: 4 (lower is better)
Translates to: VGNILKLASPAAAWVPAAVARPP*LHGLRE
Trigger: CTCTCTCAATCCATGGAGTCAAGGAGGCCGTGCAAC...TGCAGCTGGAACCCAAGCTGCAGCAGGAGATGCAAGTTTCAGGATGTTCCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR TCA 90 bp GTGGGGAACATCCTGAAACTTGCATCTCCTGCTGCAGCTTGGGTTCCAGCTGCATCACTTCGGAGGGGCTaGAGGTCAGATAGGAGGCAA +
Preference number: 4 (lower is better)
Translates to: VGNILKLASPAAAWVPAASLRRG*RSDRRQ
Trigger: TTGCCTCCTATCTGACCTTCAGCCCCTCCGAAGTGA...TGCAGCTGGAACCCAAGCTGCAGCAGGAGATGCAAGTTTCAGGATGTTCCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR TCA 90 bp CCAGGTACACTTTCCAACAGGCAGACCCTACCAGGAACTGGGAGACAAGAGCGGGGGACTGTAAGTCACTaGGGTGACACAAAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: PGTLSNRQTLPGTGRQERGTVSH*GDTKQP
Trigger: TGGCTGCTTTGTGTCACCTCAGTGACTTACAGTCCC...CCGCTCTTGTCTCCCAGTTCCTGGTAGGGTCTGCCTGTTGGAAAGTGTACCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR TCA 90 bp GGGAGCCAGACTGTGCACATCAGCCAAGACTGCTATTGCCAAACGGAGCCCAGACAGTGGGGAACATCCTaGAACTTGCATCTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: GSQTVHISQDCYCQTEPRQWGTS*NLHLLL
Trigger: CAGCAGGAGATGCAAGTTTCAGGATGTTCCCCACTG...TCTGGGCTCCGTTTGGCAATAGCAGTCTTGGCTGATGTGCACAGTCTGGCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR GCA 90 bp CAGAAGCATCCAGGTACACTTTCCAACAGGCAGACCCTACCAGGAACTGGGAGACATGCTTCAGCTCACTaGGGTGGGCGAAGGACTTGC +
Preference number: 4 (lower is better)
Translates to: QKHPGTLSNRQTLPGTGRHASAH*GGRRTC
Trigger: GCAAGTCCTTCGCCCACCGCAGTGAGCTGAAGCATG...TCTCCCAGTTCCTGGTAGGGTCTGCCTGTTGGAAAGTGTACCTGGATGCTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR GCA 90 bp ACTGCTATTGCCAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGGCAGGGTCACCACGGCACTaGCGAGCTTCACCACGATTC +
Preference number: 4 (lower is better)
Translates to: TAIAKRSPEASRYTFQQAGSPRH*RASPRF
Trigger: GAATCGTGGTGAAGCTCGGCAGTGCCGTGGTGACCC...TGCCTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTGGCAATAGCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR GCA 90 bp CGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGGCAGACCCTACCAGGAACCAAGCCATTGCCACTTaGGATAGCCAAAGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: RSPEASRYTFQQADPTRNQAIAT*DSQSCH
Trigger: GTGGCAGCTTTGGCTATCGCAAGTGGCAATGGCTTG...GTTCCTGGTAGGGTCTGCCTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR GCA 90 bp GCTGCATCACGGGGAACACAGCATCTCCTGGATGCAGGAAGCTGCAAGCATCTGCTGGTATTCACCAGTTaGACGGCCTCCTTGACTCCA +
Preference number: 4 (lower is better)
Translates to: AASRGTQHLLDAGSCKHLLVFTS*TASLTP
Trigger: TGGAGTCAAGGAGGCCGTGCAACTGGTGAATACCAG...CAGATGCTTGCAGCTTCCTGCATCCAGGAGATGCTGTGTTCCCCGTGATGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR GCA 90 bp CAGAAGCATCCAGGTACACTTTCCAACAGGCAGACCCTACCAGGAACTGGGAGACAGATCCCTTCGCTGTaGCCCATCACTGGAATCCCC +
Preference number: 4 (lower is better)
Translates to: QKHPGTLSNRQTLPGTGRQIPSL*PITGIP
Trigger: GGGGATTCCAGTGATGGGGCACAGCGAAGGGATCTG...TCTCCCAGTTCCTGGTAGGGTCTGCCTGTTGGAAAGTGTACCTGGATGCTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR GCA 90 bp GCTGCATCACGGGGAACACAGCATCTCCTGGATGCAGGAAGCTGCAAGCATCTGAGCCAAGACTGCTATTaGCAAACGGAGCCCAGAAGC +
Preference number: 4 (lower is better)
Translates to: AASRGTQHLLDAGSCKHLSQDCY*QTEPRS
Trigger: GCTTCTGGGCTCCGTTTGGCAATAGCAGTCTTGGCT...CAGATGCTTGCAGCTTCCTGCATCCAGGAGATGCTGTGTTCCCCGTGATGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR GCA 90 bp CCAGGTACACTTTCCAACAGGCAGACCCTACCAGGAACTGGGAGACAAGAGCGGGAAACTTGCATCTCCTaGTGCAGCTTGGGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: PGTLSNRQTLPGTGRQERETCIS*CSLGSS
Trigger: GCTGGAACCCAAGCTGCAGCAGGAGATGCAAGTTTC...CCGCTCTTGTCTCCCAGTTCCTGGTAGGGTCTGCCTGTTGGAAAGTGTACCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CCA 90 bp CAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGGCAGACCCTACCAGAGGCTACGGCTCCACTaGTCACCAGCATCATCTCTC +
Preference number: 4 (lower is better)
Translates to: QTEPRSIQVHFPTGRPYQRLRLH*SPASSL
Trigger: GAGAGATGATGCTGGTGACCAGTGGAGCCGTAGCCT...CTGGTAGGGTCTGCCTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CCA 90 bp CGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGGCAGACCCTACCAGGAACACTGTTGGGCTCAGCTaGGGGGACAACAGCATCATT +
Preference number: 4 (lower is better)
Translates to: RSPEASRYTFQQADPTRNTVGLS*GDNSII
Trigger: AATGATGCTGTTGTCCCCCCAGCTGAGCCCAACAGT...GTTCCTGGTAGGGTCTGCCTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CCA 90 bp CCAGGTACACTTTCCAACAGGCAGACCCTACCAGGAACTGGGAGACAAGAGCGGAGGATCTCATCACGCTaGTCCGTCAACAGATCAGCC +
Preference number: 4 (lower is better)
Translates to: PGTLSNRQTLPGTGRQERRISSR*SVNRSA
Trigger: GGCTGATCTGTTGACGGACCAGCGTGATGAGATCCT...CCGCTCTTGTCTCCCAGTTCCTGGTAGGGTCTGCCTGTTGGAAAGTGTACCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CCA 90 bp GGGAGCCAGACTGTGCACATCAGCCAAGACTGCTATTGCCAAACGGAGCCCAGATCTGTCGCAGACCGATaGCCAGGCTGTTCAATTTGG +
Preference number: 4 (lower is better)
Translates to: GSQTVHISQDCYCQTEPRSVADR*PGCSIW
Trigger: CCAAATTGAACAGCCTGGCCATCGGTCTGCGACAGA...TCTGGGCTCCGTTTGGCAATAGCAGTCTTGGCTGATGTGCACAGTCTGGCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CCA 90 bp CAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGGCAGACCCTACCAGCCAGTTCCAAGTTTTTaGCGATTCGGGTGCGGCGCA +
Preference number: 4 (lower is better)
Translates to: QTEPRSIQVHFPTGRPYQPVPSF*RFGCGA
Trigger: TGCGCCGCACCCGAATCGCCAAAAACTTGGAACTGG...CTGGTAGGGTCTGCCTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CCA 90 bp GGGAGCCAGACTGTGCACATCAGCCAAGACTGCTATTGCCAAACGGAGCCCAGACCCTTAGCAGCTTTCTaGATGTCTCTGACCAGCTGG +
Preference number: 4 (lower is better)
Translates to: GSQTVHISQDCYCQTEPRPLAAF*MSLTSW
Trigger: CCAGCTGGTCAGAGACATCCAGAAAGCTGCTAAGGG...TCTGGGCTCCGTTTGGCAATAGCAGTCTTGGCTGATGTGCACAGTCTGGCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CCA 90 bp GCTGCATCACGGGGAACACAGCATCTCCTGGATGCAGGAAGCTGCAAGCATCTGACGATGACATCCGTGTaGGAGCTGCCATACTTGTGG +
Preference number: 4 (lower is better)
Translates to: AASRGTQHLLDAGSCKHLTMTSV*ELPYLW
Trigger: CCACAAGTATGGCAGCTCCCACACGGATGTCATCGT...CAGATGCTTGCAGCTTCCTGCATCCAGGAGATGCTGTGTTCCCCGTGATGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CCA 90 bp GAAACTTGCATCTCCTGCTGCAGCTTGGGTTCCAGCTGCATCACGGGGAACACAAAATCTGAGACCACGTaGTCCTTCCCTCGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: ETCISCCSLGSSCITGNTKSETT*SFPRSS
Trigger: GCTGCTGCGAGGGAAGGACCACGTGGTCTCAGATTT...TGTGTTCCCCGTGATGCAGCTGGAACCCAAGCTGCAGCAGGAGATGCAAGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
3UTR CAA 72 bp GGGGAACATCCTGAAACTTGCATCTCCTGCTGCAGCTaGGGTTCCAGCTGCATCACGGGGAACACAGCATCT +
Preference number: 4 (lower is better)
Translates to: GEHPETCISCCS*GSSCITGNTAS
Trigger: AGATGCTGTGTTCCCCGTGATGCAGCTGGAACCCAAGCTGCAGCAGGAGATGCAAGTTTCAGGATGTTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR TCA 90 bp GCTATTGCCAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGGCAGACGCAGAAGATGTTGGTTaGAGGGCTGGAACCCACAGC +
Preference number: 4 (lower is better)
Translates to: AIAKRSPEASRYTFQQADAEDVG*RAGTHS
Trigger: GCTGTGGGTTCCAGCCCTTCAACCAACATCTTCTGC...GTCTGCCTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTGGCAATAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR TCA 90 bp AAGACTGCTATTGCCAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGGCCTGCCGCACGCTCTaGGACAGAAGGATCTCATGG +
Preference number: 4 (lower is better)
Translates to: KTAIAKRSPEASRYTFQQACRTL*DRRISW
Trigger: CCATGAGATCCTTCTGTCTCAGAGCGTGCGGCAGGC...CTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTGGCAATAGCAGTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR TCA 90 bp GAAACTTGCATCTCCTGCTGCAGCTTGGGTTCCAGCTGCATCACGGGGAACACACATGAAGTGTTCCATTaGGGTTCCGGCGCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: ETCISCCSLGSSCITGNTHEVFH*GSGASA
Trigger: AGCAGAAGCGCCGGAACCTCAATGGAACACTTCATG...TGTGTTCCCCGTGATGCAGCTGGAACCCAAGCTGCAGCAGGAGATGCAAGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR TCA 90 bp GTGGGGAACATCCTGAAACTTGCATCTCCTGCTGCAGCTTGGGTTCCAGCTGCACATGAAGTGTTCCATTaGGGTTCCGGCGCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: VGNILKLASPAAAWVPAAHEVFH*GSGASA
Trigger: AGCAGAAGCGCCGGAACCTCAATGGAACACTTCATG...TGCAGCTGGAACCCAAGCTGCAGCAGGAGATGCAAGTTTCAGGATGTTCCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR TCA 90 bp CAGAAGCATCCAGGTACACTTTCCAACAGGCAGACCCTACCAGGAACTGGGAGATCACTTCGGAGGGGCTaGAGGTCAGATAGGAGGCAA +
Preference number: 4 (lower is better)
Translates to: QKHPGTLSNRQTLPGTGRSLRRG*RSDRRQ
Trigger: TTGCCTCCTATCTGACCTTCAGCCCCTCCGAAGTGA...TCTCCCAGTTCCTGGTAGGGTCTGCCTGTTGGAAAGTGTACCTGGATGCTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR TCA 90 bp GTGGGGAACATCCTGAAACTTGCATCTCCTGCTGCAGCTTGGGTTCCAGCTGCAGGGACTGTAAGTCACTaGGGTGACACAAAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: VGNILKLASPAAAWVPAAGTVSH*GDTKQP
Trigger: TGGCTGCTTTGTGTCACCTCAGTGACTTACAGTCCC...TGCAGCTGGAACCCAAGCTGCAGCAGGAGATGCAAGTTTCAGGATGTTCCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR TCA 90 bp CAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGGCAGACCCTACCAGCAGTGGGGAACATCCTaGAACTTGCATCTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: QTEPRSIQVHFPTGRPYQQWGTS*NLHLLL
Trigger: CAGCAGGAGATGCAAGTTTCAGGATGTTCCCCACTG...CTGGTAGGGTCTGCCTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR GCA 90 bp AAGACTGCTATTGCCAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGTCTTTCAGCTGGTTCTaGCCCGAGTGGAGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: KTAIAKRSPEASRYTFQQSFSWF*PEWRAC
Trigger: GCAGGCCCTCCACTCGGGGCAGAACCAGCTGAAAGA...CTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTGGCAATAGCAGTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR GCA 90 bp GAAACTTGCATCTCCTGCTGCAGCTTGGGTTCCAGCTGCATCACGGGGAACACACAAAGCCCAGAGGGCTaGTTTCACCTTGGCTTCCAT +
Preference number: 4 (lower is better)
Translates to: ETCISCCSLGSSCITGNTQSPEG*FHLGFH
Trigger: ATGGAAGCCAAGGTGAAAGCAGCCCTCTGGGCTTTG...TGTGTTCCCCGTGATGCAGCTGGAACCCAAGCTGCAGCAGGAGATGCAAGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR GCA 90 bp GTGGGGAACATCCTGAAACTTGCATCTCCTGCTGCAGCTTGGGTTCCAGCTGCAATGTCTGTGATGACGTaGCCAGACACCTTTGGGTGG +
Preference number: 4 (lower is better)
Translates to: VGNILKLASPAAAWVPAAMSVMT*PDTFGW
Trigger: CCACCCAAAGGTGTCTGGGCACGTCATCACAGACAT...TGCAGCTGGAACCCAAGCTGCAGCAGGAGATGCAAGTTTCAGGATGTTCCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR GCA 90 bp GCTATTGCCAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGGCAGACGCCATTTCTCCCTGCTaGTCAACAGTAGGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: AIAKRSPEASRYTFQQADAISPC*STVGPA
Trigger: TGCAGGCCCTACTGTTGAGCAGCAGGGAGAAATGGC...GTCTGCCTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTGGCAATAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR GCA 90 bp ACTGCTATTGCCAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGGCACGCGCCATTTCTCCCTaGTGCTCAACAGTAGGGCCT +
Preference number: 4 (lower is better)
Translates to: TAIAKRSPEASRYTFQQARAISP*CSTVGP
Trigger: AGGCCCTACTGTTGAGCAGCAGGGAGAAATGGCGCG...TGCCTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTGGCAATAGCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR GCA 90 bp CAAGACTGCTATTGCCAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGTCCTGGGAGGAGGCTaGGATCTGTCGCAGACCGAT +
Preference number: 4 (lower is better)
Translates to: QDCYCQTEPRSIQVHFPTVLGGG*DLSQTD
Trigger: ATCGGTCTGCGACAGATCGCAGCCTCCTCCCAGGAC...TGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTGGCAATAGCAGTCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR GCA 90 bp CAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGGCAGACCCTACCAGCATCCGTGTGGGAGCTaGCATACTTGTGGATGTGGT +
Preference number: 4 (lower is better)
Translates to: QTEPRSIQVHFPTGRPYQHPCGS*HTCGCG
Trigger: ACCACATCCACAAGTATGGCAGCTCCCACACGGATG...CTGGTAGGGTCTGCCTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR GCA 90 bp GCTATTGCCAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGGCAGACACTTGCATCTCCTGCTaGAGCTTGGGTTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: AIAKRSPEASRYTFQQADTCISC*SLGSSC
Trigger: GCAGCTGGAACCCAAGCTGCAGCAGGAGATGCAAGT...GTCTGCCTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTGGCAATAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR GCA 90 bp CAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGGCAGACCCTACCAGGAAACTTGCATCTCCTaGTGCAGCTTGGGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: QTEPRSIQVHFPTGRPYQETCIS*CSLGSS
Trigger: GCTGGAACCCAAGCTGCAGCAGGAGATGCAAGTTTC...CTGGTAGGGTCTGCCTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CCA 90 bp GTGGGGAACATCCTGAAACTTGCATCTCCTGCTGCAGCTTGGGTTCCAGCTGCACAGGGCAGAAGATGTTaGTTGAAGGGCTGGAACCCA +
Preference number: 4 (lower is better)
Translates to: VGNILKLASPAAAWVPAAQGRRC*LKGWNP
Trigger: TGGGTTCCAGCCCTTCAACCAACATCTTCTGCCCTG...TGCAGCTGGAACCCAAGCTGCAGCAGGAGATGCAAGTTTCAGGATGTTCCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CCA 90 bp GCTGCATCACGGGGAACACAGCATCTCCTGGATGCAGGAAGCTGCAAGCATCTGTCACCACGATTCTCTTaGCATGCTTCAGCTCACTGC +
Preference number: 4 (lower is better)
Translates to: AASRGTQHLLDAGSCKHLSPRFS*HASAHC
Trigger: GCAGTGAGCTGAAGCATGCCAAGAGAATCGTGGTGA...CAGATGCTTGCAGCTTCCTGCATCCAGGAGATGCTGTGTTCCCCGTGATGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CCA 90 bp ACTGTGCACATCAGCCAAGACTGCTATTGCCAAACGGAGCCCAGAAGCATCCAGGCCATTTCTTTCAGCTaGTTCTGCCCCGAGTGGAGG +
Preference number: 4 (lower is better)
Translates to: TVHISQDCYCQTEPRSIQAISFS*FCPEWR
Trigger: CCTCCACTCGGGGCAGAACCAGCTGAAAGAAATGGC...CTGGATGCTTCTGGGCTCCGTTTGGCAATAGCAGTCTTGGCTGATGTGCACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CCA 90 bp CAGAAGCATCCAGGTACACTTTCCAACAGGCAGACCCTACCAGGAACTGGGAGAGGGCTGCTTTCACCTTaGCTTCCATGCCACCCATTC +
Preference number: 4 (lower is better)
Translates to: QKHPGTLSNRQTLPGTGRGLLSP*LPCHPF
Trigger: GAATGGGTGGCATGGAAGCCAAGGTGAAAGCAGCCC...TCTCCCAGTTCCTGGTAGGGTCTGCCTGTTGGAAAGTGTACCTGGATGCTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CCA 90 bp GAAACTTGCATCTCCTGCTGCAGCTTGGGTTCCAGCTGCATCACGGGGAACACAGTGCCCAGACACCTTTaGGTGGGTTCCATTGGCAAT +
Preference number: 4 (lower is better)
Translates to: ETCISCCSLGSSCITGNTVPRHL*VGSIGN
Trigger: ATTGCCAATGGAACCCACCCAAAGGTGTCTGGGCAC...TGTGTTCCCCGTGATGCAGCTGGAACCCAAGCTGCAGCAGGAGATGCAAGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CCA 90 bp ACTGTGCACATCAGCCAAGACTGCTATTGCCAAACGGAGCCCAGAAGCATCCAGGCTCAGGTTCCAAGGTaGCCAACATCCTTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: TVHISQDCYCQTEPRSIQAQVPR*PTSFLQ
Trigger: CTGGAGGAAGGATGTTGGCCACCTTGGAACCTGAGC...CTGGATGCTTCTGGGCTCCGTTTGGCAATAGCAGTCTTGGCTGATGTGCACAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CCA 90 bp ACTGTGCACATCAGCCAAGACTGCTATTGCCAAACGGAGCCCAGAAGCATCCAGCCAGTTCCAAGTTTTTaGCGATTCGGGTGCGGCGCA +
Preference number: 4 (lower is better)
Translates to: TVHISQDCYCQTEPRSIQPVPSF*RFGCGA
Trigger: TGCGCCGCACCCGAATCGCCAAAAACTTGGAACTGG...CTGGATGCTTCTGGGCTCCGTTTGGCAATAGCAGTCTTGGCTGATGTGCACAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CCA 90 bp CAGAAGCATCCAGGTACACTTTCCAACAGGCAGACCCTACCAGGAACTGGGAGATCCTGGGTCAGGAGGTaGAGAATCCGGTTGCTGTGT +
Preference number: 4 (lower is better)
Translates to: QKHPGTLSNRQTLPGTGRSWVRR*RIRLLC
Trigger: ACACAGCAACCGGATTCTCCACCTCCTGACCCAGGA...TCTCCCAGTTCCTGGTAGGGTCTGCCTGTTGGAAAGTGTACCTGGATGCTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CCA 90 bp CAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGGCAGACCCTACCAGCCCTTAGCAGCTTTCTaGATGTCTCTGACCAGCTGG +
Preference number: 4 (lower is better)
Translates to: QTEPRSIQVHFPTGRPYQPLAAF*MSLTSW
Trigger: CCAGCTGGTCAGAGACATCCAGAAAGCTGCTAAGGG...CTGGTAGGGTCTGCCTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CCA 90 bp GAAACTTGCATCTCCTGCTGCAGCTTGGGTTCCAGCTGCATCACGGGGAACACAACGATGACATCCGTGTaGGAGCTGCCATACTTGTGG +
Preference number: 4 (lower is better)
Translates to: ETCISCCSLGSSCITGNTTMTSV*ELPYLW
Trigger: CCACAAGTATGGCAGCTCCCACACGGATGTCATCGT...TGTGTTCCCCGTGATGCAGCTGGAACCCAAGCTGCAGCAGGAGATGCAAGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CCA 90 bp ACTGCTATTGCCAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGGCAGACCCTACCAGGAACTaGGAGACAAGAGCGGGCTCT +
Preference number: 4 (lower is better)
Translates to: TAIAKRSPEASRYTFQQADPTRN*ETRAGS
Trigger: AGAGCCCGCTCTTGTCTCCCAGTTCCTGGTAGGGTC...TGCCTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTGGCAATAGCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
3UTR CAA 72 bp TGGGAGCCAGACTGTGCACATCAGCCAAGACTGCTATaGCCAAACGGAGCCCAGAAGCATCCAGGTACACTT +
Preference number: 4 (lower is better)
Translates to: WEPDCAHQPRLL*PNGAQKHPGTL
Trigger: AAGTGTACCTGGATGCTTCTGGGCTCCGTTTGGCAATAGCAGTCTTGGCTGATGTGCACAGTCTGGCTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR TCA 90 bp ACTGCTATTGCCAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGGCACTTGACTCCATGGATTaGGAGAGCCTCCTGGGTCAG +
Preference number: 4 (lower is better)
Translates to: TAIAKRSPEASRYTFQQALDSMD*ESLLGQ
Trigger: CTGACCCAGGAGGCTCTCTCAATCCATGGAGTCAAG...TGCCTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTGGCAATAGCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR TCA 90 bp ACTGCTATTGCCAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGGCACTTTCTGGATGTCTCTaGCCAGCTGGGAAGAGCCAC +
Preference number: 4 (lower is better)
Translates to: TAIAKRSPEASRYTFQQALSGCL*PAGKSH
Trigger: GTGGCTCTTCCCAGCTGGTCAGAGACATCCAGAAAG...TGCCTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTGGCAATAGCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR TCA 90 bp ACTGTGCACATCAGCCAAGACTGCTATTGCCAAACGGAGCCCAGAAGCATCCAGATACTCAGTTCGGAGTaGCTTCACTTCGGAGGGGCT +
Preference number: 4 (lower is better)
Translates to: TVHISQDCYCQTEPRSIQILSSE*LHFGGA
Trigger: AGCCCCTCCGAAGTGAAGTCACTCCGAACTGAGTAT...CTGGATGCTTCTGGGCTCCGTTTGGCAATAGCAGTCTTGGCTGATGTGCACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR TCA 90 bp GTGGGGAACATCCTGAAACTTGCATCTCCTGCTGCAGCTTGGGTTCCAGCTGCAGAGCGGGCTCTCTCCTaGGATAAGACAAGTTTAACG +
Preference number: 4 (lower is better)
Translates to: VGNILKLASPAAAWVPAAERALS*DKTSLT
Trigger: CGTTAAACTTGTCTTATCTCAGGAGAGAGCCCGCTC...TGCAGCTGGAACCCAAGCTGCAGCAGGAGATGCAAGTTTCAGGATGTTCCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR TCA 90 bp GAAACTTGCATCTCCTGCTGCAGCTTGGGTTCCAGCTGCATCACGGGGAACACAGAGCGGGCTCTCTCCTaGGATAAGACAAGTTTAACG +
Preference number: 4 (lower is better)
Translates to: ETCISCCSLGSSCITGNTERALS*DKTSLT
Trigger: CGTTAAACTTGTCTTATCTCAGGAGAGAGCCCGCTC...TGTGTTCCCCGTGATGCAGCTGGAACCCAAGCTGCAGCAGGAGATGCAAGTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR GCA 90 bp AAGACTGCTATTGCCAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGGGCGCAAGCGTTGTTTaGCAAAGGCTACGGCTCCAC +
Preference number: 4 (lower is better)
Translates to: KTAIAKRSPEASRYTFQQGASVV*QRLRLH
Trigger: GTGGAGCCGTAGCCTTTGGCAAACAACGCTTGCGCC...CTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTGGCAATAGCAGTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR GCA 90 bp GCTGCATCACGGGGAACACAGCATCTCCTGGATGCAGGAAGCTGCAAGCATCTGAGGTTCCGGCGCTTCTaGTCATCATGGAAATCCAAA +
Preference number: 4 (lower is better)
Translates to: AASRGTQHLLDAGSCKHLRFRRF*SSWKSK
Trigger: TTTGGATTTCCATGATGAGCAGAAGCGCCGGAACCT...CAGATGCTTGCAGCTTCCTGCATCCAGGAGATGCTGTGTTCCCCGTGATGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR GCA 90 bp CAGAAGCATCCAGGTACACTTTCCAACAGGCAGACCCTACCAGGAACTGGGAGACAAAGCCCAGAGGGCTaGTTTCACCTTGGCTTCCAT +
Preference number: 4 (lower is better)
Translates to: QKHPGTLSNRQTLPGTGRQSPEG*FHLGFH
Trigger: ATGGAAGCCAAGGTGAAAGCAGCCCTCTGGGCTTTG...TCTCCCAGTTCCTGGTAGGGTCTGCCTGTTGGAAAGTGTACCTGGATGCTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR GCA 90 bp ACTGTGCACATCAGCCAAGACTGCTATTGCCAAACGGAGCCCAGAAGCATCCAGATGTCTGTGATGACGTaGCCAGACACCTTTGGGTGG +
Preference number: 4 (lower is better)
Translates to: TVHISQDCYCQTEPRSIQMSVMT*PDTFGW
Trigger: CCACCCAAAGGTGTCTGGGCACGTCATCACAGACAT...CTGGATGCTTCTGGGCTCCGTTTGGCAATAGCAGTCTTGGCTGATGTGCACAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR GCA 90 bp CAAGACTGCTATTGCCAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACACGCGCCATTTCTCCCTaGTGCTCAACAGTAGGGCCT +
Preference number: 4 (lower is better)
Translates to: QDCYCQTEPRSIQVHFPTRAISP*CSTVGP
Trigger: AGGCCCTACTGTTGAGCAGCAGGGAGAAATGGCGCG...TGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTGGCAATAGCAGTCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR GCA 90 bp CCAGGTACACTTTCCAACAGGCAGACCCTACCAGGAACTGGGAGACAAGAGCGGATAATTTCTGCTCTCTaGTCAGGTTCCAAGGTGGCC +
Preference number: 4 (lower is better)
Translates to: PGTLSNRQTLPGTGRQERIISAL*SGSKVA
Trigger: GGCCACCTTGGAACCTGAGCAGAGAGCAGAAATTAT...CCGCTCTTGTCTCCCAGTTCCTGGTAGGGTCTGCCTGTTGGAAAGTGTACCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR GCA 90 bp CAGAAGCATCCAGGTACACTTTCCAACAGGCAGACCCTACCAGGAACTGGGAGACTGGTATTCACCAGTTaGACGGCCTCCTTGACTCCA +
Preference number: 4 (lower is better)
Translates to: QKHPGTLSNRQTLPGTGRLVFTS*TASLTP
Trigger: TGGAGTCAAGGAGGCCGTGCAACTGGTGAATACCAG...TCTCCCAGTTCCTGGTAGGGTCTGCCTGTTGGAAAGTGTACCTGGATGCTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR GCA 90 bp ACTGCTATTGCCAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGGCACAGGCACTGTCTACGTaGTGCAGGAAGAACTCCGCT +
Preference number: 4 (lower is better)
Translates to: TAIAKRSPEASRYTFQQAQALST*CRKNSA
Trigger: AGCGGAGTTCTTCCTGCAGCACGTAGACAGTGCCTG...TGCCTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTGGCAATAGCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR GCA 90 bp GCTATTGCCAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGGCAGACCACATCAGCCAAGACTaGTATTGCCAAACGGAGCCC +
Preference number: 4 (lower is better)
Translates to: AIAKRSPEASRYTFQQADHISQD*YCQTEP
Trigger: GGGCTCCGTTTGGCAATAGCAGTCTTGGCTGATGTG...GTCTGCCTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTGGCAATAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR GCA 90 bp GCTGCATCACGGGGAACACAGCATCTCCTGGATGCAGGAAGCTGCAAGCATCTGGAACATCCTGAAACTTaGATCTCCTGCTGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: AASRGTQHLLDAGSCKHLEHPET*ISCCSL
Trigger: CAAGCTGCAGCAGGAGATGCAAGTTTCAGGATGTTC...CAGATGCTTGCAGCTTCCTGCATCCAGGAGATGCTGTGTTCCCCGTGATGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CCA 90 bp ACTGCTATTGCCAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGGCATTCAGCTCACTGCGGTaGGCGAAGGACTTGCCATGT +
Preference number: 4 (lower is better)
Translates to: TAIAKRSPEASRYTFQQAFSSLR*AKDLPC
Trigger: ACATGGCAAGTCCTTCGCCCACCGCAGTGAGCTGAA...TGCCTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTGGCAATAGCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CCA 90 bp GTGGGGAACATCCTGAAACTTGCATCTCCTGCTGCAGCTTGGGTTCCAGCTGCAGACAGAAGGATCTCATaGCGCAAGCGTTGTTTGCCA +
Preference number: 4 (lower is better)
Translates to: VGNILKLASPAAAWVPAADRRIS*RKRCLP
Trigger: TGGCAAACAACGCTTGCGCCATGAGATCCTTCTGTC...TGCAGCTGGAACCCAAGCTGCAGCAGGAGATGCAAGTTTCAGGATGTTCCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CCA 90 bp GGGAGCCAGACTGTGCACATCAGCCAAGACTGCTATTGCCAAACGGAGCCCAGATTGGTCACCAAAATCTaGGCAGCACAGATGCTGTAC +
Preference number: 4 (lower is better)
Translates to: GSQTVHISQDCYCQTEPRLVTKI*AAQMLY
Trigger: GTACAGCATCTGTGCTGCCCAGATTTTGGTGACCAA...TCTGGGCTCCGTTTGGCAATAGCAGTCTTGGCTGATGTGCACAGTCTGGCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CCA 90 bp ACTGTGCACATCAGCCAAGACTGCTATTGCCAAACGGAGCCCAGAAGCATCCAGAGGATCTCATCACGCTaGTCCGTCAACAGATCAGCC +
Preference number: 4 (lower is better)
Translates to: TVHISQDCYCQTEPRSIQRISSR*SVNRSA
Trigger: GGCTGATCTGTTGACGGACCAGCGTGATGAGATCCT...CTGGATGCTTCTGGGCTCCGTTTGGCAATAGCAGTCTTGGCTGATGTGCACAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CCA 90 bp CGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGGCAGACCCTACCAGGAACCAGCAGAACTCCAATTaGGACAGTCACTTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: RSPEASRYTFQQADPTRNQQNSN*DSHLFQ
Trigger: CTGGAACAAGTGACTGTCCCAATTGGAGTTCTGCTG...GTTCCTGGTAGGGTCTGCCTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CCA 90 bp CCAGGTACACTTTCCAACAGGCAGACCCTACCAGGAACTGGGAGACAAGAGCGGTGTGGATGTGGTCAATaGCATCCTGAACGTTGTCCA +
Preference number: 4 (lower is better)
Translates to: PGTLSNRQTLPGTGRQERCGCGQ*HPERCP
Trigger: TGGACAACGTTCAGGATGCCATTGACCACATCCACA...CCGCTCTTGTCTCCCAGTTCCTGGTAGGGTCTGCCTGTTGGAAAGTGTACCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CCA 90 bp GTGGGGAACATCCTGAAACTTGCATCTCCTGCTGCAGCTTGGGTTCCAGCTGCAGAGCTGCCATACTTGTaGATGTGGTCAATGGCATCC +
Preference number: 4 (lower is better)
Translates to: VGNILKLASPAAAWVPAAELPYL*MWSMAS
Trigger: GGATGCCATTGACCACATCCACAAGTATGGCAGCTC...TGCAGCTGGAACCCAAGCTGCAGCAGGAGATGCAAGTTTCAGGATGTTCCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CCA 90 bp CAGAAGCATCCAGGTACACTTTCCAACAGGCAGACCCTACCAGGAACTGGGAGAACTGGTCCCCGGGCGTaGATTCTCGATGTACTGATT +
Preference number: 4 (lower is better)
Translates to: QKHPGTLSNRQTLPGTGRTGPRA*ILDVLI
Trigger: AATCAGTACATCGAGAATCCACGCCCGGGGACCAGT...TCTCCCAGTTCCTGGTAGGGTCTGCCTGTTGGAAAGTGTACCTGGATGCTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CCA 90 bp CAAGACTGCTATTGCCAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACATCCCTCAAGTCCTACTaGTCCCCGGGCGTGGATTCT +
Preference number: 4 (lower is better)
Translates to: QDCYCQTEPRSIQVHFPTSLKSY*SPGVDS
Trigger: AGAATCCACGCCCGGGGACCAGTAGGACTTGAGGGA...TGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTGGCAATAGCAGTCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CCA 90 bp ACTGCTATTGCCAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGGCAAAATCTGAGACCACGTaGTCCTTCCCTCGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: TAIAKRSPEASRYTFQQAKSETT*SFPRSS
Trigger: GCTGCTGCGAGGGAAGGACCACGTGGTCTCAGATTT...TGCCTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTGGCAATAGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR TCA 90 bp ACTGTGCACATCAGCCAAGACTGCTATTGCCAAACGGAGCCCAGAAGCATCCAGAGACGGTTGTACACTTaGCCCAGGGCAGAAGATGTT +
Preference number: 4 (lower is better)
Translates to: TVHISQDCYCQTEPRSIQRRLYT*PRAEDV
Trigger: AACATCTTCTGCCCTGGGTCAAGTGTACAACCGTCT...CTGGATGCTTCTGGGCTCCGTTTGGCAATAGCAGTCTTGGCTGATGTGCACAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR TCA 90 bp CGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGGCAGACCCTACCAGGAACGAAGGCTGGATACAATaGGATCTGAAGACGGTTGTA +
Preference number: 4 (lower is better)
Translates to: RSPEASRYTFQQADPTRNEGWIQ*DLKTVV
Trigger: TACAACCGTCTTCAGATCTCATTGTATCCAGCCTTC...GTTCCTGGTAGGGTCTGCCTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR TCA 90 bp ACTGTGCACATCAGCCAAGACTGCTATTGCCAAACGGAGCCCAGAAGCATCCAGATCATCTCTCTGCCCTaGTTCTGCAGCACTGATACC +
Preference number: 4 (lower is better)
Translates to: TVHISQDCYCQTEPRSIQIISLP*FCSTDT
Trigger: GGTATCAGTGCTGCAGAATCAGGGCAGAGAGATGAT...CTGGATGCTTCTGGGCTCCGTTTGGCAATAGCAGTCTTGGCTGATGTGCACAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR TCA 90 bp AAGACTGCTATTGCCAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGGTTGCACGGCCTCCTTaGCTCCATGGATTGAGAGAG +
Preference number: 4 (lower is better)
Translates to: KTAIAKRSPEASRYTFQQVARPP*LHGLRE
Trigger: CTCTCTCAATCCATGGAGTCAAGGAGGCCGTGCAAC...CTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTGGCAATAGCAGTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR TCA 90 bp AAGACTGCTATTGCCAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGCTTTCTGGATGTCTCTaGCCAGCTGGGAAGAGCCAC +
Preference number: 4 (lower is better)
Translates to: KTAIAKRSPEASRYTFQQLSGCL*PAGKSH
Trigger: GTGGCTCTTCCCAGCTGGTCAGAGACATCCAGAAAG...CTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTGGCAATAGCAGTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR TCA 90 bp GCTATTGCCAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGGCAGACGAATCCACATACATGTaGCAGATCCCTTCGCTGTGC +
Preference number: 4 (lower is better)
Translates to: AIAKRSPEASRYTFQQADESTYM*QIPSLC
Trigger: GCACAGCGAAGGGATCTGTCACATGTATGTGGATTC...GTCTGCCTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTGGCAATAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR TCA 90 bp CAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGGCAGACCCTACCAGCAAATAATGGTGTCCTaGGCAGATCCCGGTGGATTA +
Preference number: 4 (lower is better)
Translates to: QTEPRSIQVHFPTGRPYQQIMVS*ADPGGL
Trigger: TAATCCACCGGGATCTGCTCAGGACACCATTATTTG...CTGGTAGGGTCTGCCTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR TCA 90 bp CAGAAGCATCCAGGTACACTTTCCAACAGGCAGACCCTACCAGGAACTGGGAGAGGATTCTCGATGTACTaGTTCCCACTTCAGCTCCCA +
Preference number: 4 (lower is better)
Translates to: QKHPGTLSNRQTLPGTGRGFSMY*FPLQLP
Trigger: TGGGAGCTGAAGTGGGAATCAGTACATCGAGAATCC...TCTCCCAGTTCCTGGTAGGGTCTGCCTGTTGGAAAGTGTACCTGGATGCTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR TCA 90 bp GTGGGGAACATCCTGAAACTTGCATCTCCTGCTGCAGCTTGGGTTCCAGCTGCACAGTTGGTGTTTCTCTaGGGAATAGGGAGGTTCTCA +
Preference number: 4 (lower is better)
Translates to: VGNILKLASPAAAWVPAAQLVFL*GIGRFS
Trigger: TGAGAACCTCCCTATTCCTCAGAGAAACACCAACTG...TGCAGCTGGAACCCAAGCTGCAGCAGGAGATGCAAGTTTCAGGATGTTCCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR GCA 90 bp GCTGCATCACGGGGAACACAGCATCTCCTGGATGCAGGAAGCTGCAAGCATCTGCTTGACTCAACATGCTaGGATGTGGTCACTAACCAA +
Preference number: 4 (lower is better)
Translates to: AASRGTQHLLDAGSCKHLLDSTC*DVVTNQ
Trigger: TTGGTTAGTGACCACATCGCAGCATGTTGAGTCAAG...CAGATGCTTGCAGCTTCCTGCATCCAGGAGATGCTGTGTTCCCCGTGATGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR GCA 90 bp CAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGGCAGACCCTACCAGAGGTTCCGGCGCTTCTaGTCATCATGGAAATCCAAA +
Preference number: 4 (lower is better)
Translates to: QTEPRSIQVHFPTGRPYQRFRRF*SSWKSK
Trigger: TTTGGATTTCCATGATGAGCAGAAGCGCCGGAACCT...CTGGTAGGGTCTGCCTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR GCA 90 bp CAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGGCAGACCCTACCAGATAATTTCTGCTCTCTaGTCAGGTTCCAAGGTGGCC +
Preference number: 4 (lower is better)
Translates to: QTEPRSIQVHFPTGRPYQIISAL*SGSKVA
Trigger: GGCCACCTTGGAACCTGAGCAGAGAGCAGAAATTAT...CTGGTAGGGTCTGCCTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR GCA 90 bp CAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGGCAGACCCTACCAGCATCAGAAAAGCGAGTaGTGGCATTCCAGAACACAC +
Preference number: 4 (lower is better)
Translates to: QTEPRSIQVHFPTGRPYQHQKSE*WHSRTH
Trigger: GTGTGTTCTGGAATGCCAGCACTCGCTTTTCTGATG...CTGGTAGGGTCTGCCTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR GCA 90 bp ACTGTGCACATCAGCCAAGACTGCTATTGCCAAACGGAGCCCAGAAGCATCCAGACAGCATCTCCTGGATaGAGGAAGCTGCAAGCATCT +
Preference number: 4 (lower is better)
Translates to: TVHISQDCYCQTEPRSIQTASPG*RKLQAS
Trigger: AGATGCTTGCAGCTTCCTGCATCCAGGAGATGCTGT...CTGGATGCTTCTGGGCTCCGTTTGGCAATAGCAGTCTTGGCTGATGTGCACAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR GCA 90 bp AAGACTGCTATTGCCAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGAGCTTGGGTTCCAGCTaGATCACGGGGAACACAGCA +
Preference number: 4 (lower is better)
Translates to: KTAIAKRSPEASRYTFQQSLGSS*ITGNTA
Trigger: TGCTGTGTTCCCCGTGATGCAGCTGGAACCCAAGCT...CTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTGGCAATAGCAGTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR GCA 90 bp CAAGACTGCTATTGCCAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAAGCTTGGGTTCCAGCTaGATCACGGGGAACACAGCA +
Preference number: 4 (lower is better)
Translates to: QDCYCQTEPRSIQVHFPTSLGSS*ITGNTA
Trigger: TGCTGTGTTCCCCGTGATGCAGCTGGAACCCAAGCT...TGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTGGCAATAGCAGTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR GCA 90 bp ACTGTGCACATCAGCCAAGACTGCTATTGCCAAACGGAGCCCAGAAGCATCCAGACACTAATAACCCCCTaGAGGTCACTGTTGGGCTCA +
Preference number: 4 (lower is better)
Translates to: TVHISQDCYCQTEPRSIQTLITP*RSLLGS
Trigger: TGAGCCCAACAGTGACCTGCAGGGGGTTATTAGTGT...CTGGATGCTTCTGGGCTCCGTTTGGCAATAGCAGTCTTGGCTGATGTGCACAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371221.3
CDS-3UTR CCA 90 bp ACTGTGCACATCAGCCAAGACTGCTATTGCCAAACGGAGCCCAGAAGCATCCAGTCACCACGATTCTCTTaGCATGCTTCAGCTCACTGC +
Preference number: 4 (lower is better)
Translates to: TVHISQDCYCQTEPRSIQSPRFS*HASAHC
Trigger: GCAGTGAGCTGAAGCATGCCAAGAGAATCGTGGTGA...CTGGATGCTTCTGGGCTCCGTTTGGCAATAGCAGTCTTGGCTGATGTGCACAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CCA 90 bp CAAGACTGCTATTGCCAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGGGCTGCTTTCACCTTaGCTTCCATGCCACCCATTC +
Preference number: 4 (lower is better)
Translates to: QDCYCQTEPRSIQVHFPTGLLSP*LPCHPF
Trigger: GAATGGGTGGCATGGAAGCCAAGGTGAAAGCAGCCC...TGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTGGCAATAGCAGTCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CCA 90 bp GGGAGCCAGACTGTGCACATCAGCCAAGACTGCTATTGCCAAACGGAGCCCAGACCAGGCTGTTCAATTTaGATGTGGAGAGGCTTAAAC +
Preference number: 4 (lower is better)
Translates to: GSQTVHISQDCYCQTEPRPGCSI*MWRGLN
Trigger: GTTTAAGCCTCTCCACATCCAAATTGAACAGCCTGG...TCTGGGCTCCGTTTGGCAATAGCAGTCTTGGCTGATGTGCACAGTCTGGCTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CCA 90 bp CAGAAGCATCCAGGTACACTTTCCAACAGGCAGACCCTACCAGGAACTGGGAGAGAGCTGCCATACTTGTaGATGTGGTCAATGGCATCC +
Preference number: 4 (lower is better)
Translates to: QKHPGTLSNRQTLPGTGRELPYL*MWSMAS
Trigger: GGATGCCATTGACCACATCCACAAGTATGGCAGCTC...TCTCCCAGTTCCTGGTAGGGTCTGCCTGTTGGAAAGTGTACCTGGATGCTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR TCA 90 bp GTGGGGAACATCCTGAAACTTGCATCTCCTGCTGCAGCTTGGGTTCCAGCTGCACTGATTCTGCAGCACTaGTACCTGCTCAACAATAGA +
Preference number: 4 (lower is better)
Translates to: VGNILKLASPAAAWVPAALILQH*YLLNNR
Trigger: TCTATTGTTGAGCAGGTATCAGTGCTGCAGAATCAG...TGCAGCTGGAACCCAAGCTGCAGCAGGAGATGCAAGTTTCAGGATGTTCCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR TCA 90 bp AAGACTGCTATTGCCAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGCCTCCTTCCCTCCTTTaGGTAACAAGCCATTGCCAC +
Preference number: 4 (lower is better)
Translates to: KTAIAKRSPEASRYTFQQPPSLL*VTSHCH
Trigger: GTGGCAATGGCTTGTTACTCAAAGGAGGGAAGGAGG...CTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTGGCAATAGCAGTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR TCA 90 bp GGGAGCCAGACTGTGCACATCAGCCAAGACTGCTATTGCCAAACGGAGCCCAGAAATTTGGGGCCTGCATaGATTTTTACCTGTTCCACT +
Preference number: 4 (lower is better)
Translates to: GSQTVHISQDCYCQTEPRNLGPA*IFTCST
Trigger: AGTGGAACAGGTAAAAATTCATGCAGGCCCCAAATT...TCTGGGCTCCGTTTGGCAATAGCAGTCTTGGCTGATGTGCACAGTCTGGCTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR TCA 90 bp CGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGGCAGACCCTACCAGGAACAATTTGGGGCCTGCATaGATTTTTACCTGTTCCACT +
Preference number: 4 (lower is better)
Translates to: RSPEASRYTFQQADPTRNNLGPA*IFTCST
Trigger: AGTGGAACAGGTAAAAATTCATGCAGGCCCCAAATT...GTTCCTGGTAGGGTCTGCCTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR TCA 90 bp GCTATTGCCAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGGCAGACTGGTCAATGGCATCCTaGACGTTGTCCACTACTTCA +
Preference number: 4 (lower is better)
Translates to: AIAKRSPEASRYTFQQADWSMAS*TLSTTS
Trigger: TGAAGTAGTGGACAACGTTCAGGATGCCATTGACCA...GTCTGCCTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTGGCAATAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR TCA 90 bp GCTATTGCCAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGGCAGACCAGTTGGTGTTTCTCTaGGGAATAGGGAGGTTCTCA +
Preference number: 4 (lower is better)
Translates to: AIAKRSPEASRYTFQQADQLVFL*GIGRFS
Trigger: TGAGAACCTCCCTATTCCTCAGAGAAACACCAACTG...GTCTGCCTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTGGCAATAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR GCA 90 bp AAGACTGCTATTGCCAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGCAAGCCATTGCCACTTaGGATAGCCAAAGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: KTAIAKRSPEASRYTFQQQAIAT*DSQSCH
Trigger: GTGGCAGCTTTGGCTATCGCAAGTGGCAATGGCTTG...CTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTGGCAATAGCAGTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR GCA 90 bp GGGAGCCAGACTGTGCACATCAGCCAAGACTGCTATTGCCAAACGGAGCCCAGAGGCAAATTTGGGGCCTaGATGAATTTTTACCTGTTC +
Preference number: 4 (lower is better)
Translates to: GSQTVHISQDCYCQTEPRGKFGA*MNFYLF
Trigger: GAACAGGTAAAAATTCATGCAGGCCCCAAATTTGCC...TCTGGGCTCCGTTTGGCAATAGCAGTCTTGGCTGATGTGCACAGTCTGGCTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR GCA 90 bp GCTGCATCACGGGGAACACAGCATCTCCTGGATGCAGGAAGCTGCAAGCATCTGTGTCCACTACTTCAATaGATAATTCCAGGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: AASRGTQHLLDAGSCKHLCPLLQ*IIPGPH
Trigger: ATGGGGACCTGGAATTATGCATTGAAGTAGTGGACA...CAGATGCTTGCAGCTTCCTGCATCCAGGAGATGCTGTGTTCCCCGTGATGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR GCA 90 bp GCTATTGCCAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGGCAGACCATCAGAAAAGCGAGTaGTGGCATTCCAGAACACAC +
Preference number: 4 (lower is better)
Translates to: AIAKRSPEASRYTFQQADHQKSE*WHSRTH
Trigger: GTGTGTTCTGGAATGCCAGCACTCGCTTTTCTGATG...GTCTGCCTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTGGCAATAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR GCA 90 bp CAAGACTGCTATTGCCAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACACACATCAGCCAAGACTaGTATTGCCAAACGGAGCCC +
Preference number: 4 (lower is better)
Translates to: QDCYCQTEPRSIQVHFPTHISQD*YCQTEP
Trigger: GGGCTCCGTTTGGCAATAGCAGTCTTGGCTGATGTG...TGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTGGCAATAGCAGTCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR GCA 90 bp ACTGTGCACATCAGCCAAGACTGCTATTGCCAAACGGAGCCCAGAAGCATCCAGGAACATCCTGAAACTTaGATCTCCTGCTGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: TVHISQDCYCQTEPRSIQEHPET*ISCCSL
Trigger: CAAGCTGCAGCAGGAGATGCAAGTTTCAGGATGTTC...CTGGATGCTTCTGGGCTCCGTTTGGCAATAGCAGTCTTGGCTGATGTGCACAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CCA 90 bp AAGATAATTGGACTTGGCAAAGTCCCTATCGGTAGCAACTATTTTCTTACTTTAGCCGCCTTCGCCCCCTaGCACTACCGCGGGTCCGCA +
Preference number: 4 (lower is better)
Translates to: KIIGLGKVPIGSNYFLTLAAFAP*HYRGSA
Trigger: TGCGGACCCGCGGTAGTGCCAGGGGGCGAAGGCGGC...TAAAGTAAGAAAATAGTTGCTACCGATAGGGACTTTGCCAAGTCCAATTATCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CCA 90 bp CGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGGCAGACCCTACCAGGAACCAACATGCTGCGATGTaGTCACTAACCAAAGTATCT +
Preference number: 4 (lower is better)
Translates to: RSPEASRYTFQQADPTRNQHAAM*SLTKVS
Trigger: AGATACTTTGGTTAGTGACCACATCGCAGCATGTTG...GTTCCTGGTAGGGTCTGCCTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CCA 90 bp GAAACTTGCATCTCCTGCTGCAGCTTGGGTTCCAGCTGCATCACGGGGAACACACGCTTCTGCTCATCATaGAAATCCAAATTGGTCACC +
Preference number: 4 (lower is better)
Translates to: ETCISCCSLGSSCITGNTRFCSS*KSKLVT
Trigger: GGTGACCAATTTGGATTTCCATGATGAGCAGAAGCG...TGTGTTCCCCGTGATGCAGCTGGAACCCAAGCTGCAGCAGGAGATGCAAGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CCA 90 bp GCTATTGCCAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGGCAGACCCAGACACCTTTGGGTaGGTTCCATTGGCAATAACA +
Preference number: 4 (lower is better)
Translates to: AIAKRSPEASRYTFQQADPDTFG*VPLAIT
Trigger: TGTTATTGCCAATGGAACCCACCCAAAGGTGTCTGG...GTCTGCCTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTGGCAATAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CCA 90 bp AAGACTGCTATTGCCAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGGTGCCCAGACACCTTTaGGTGGGTTCCATTGGCAAT +
Preference number: 4 (lower is better)
Translates to: KTAIAKRSPEASRYTFQQVPRHL*VGSIGN
Trigger: ATTGCCAATGGAACCCACCCAAAGGTGTCTGGGCAC...CTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTGGCAATAGCAGTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CCA 90 bp AAGACTGCTATTGCCAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGTCTGTCGCAGACCGATaGCCAGGCTGTTCAATTTGG +
Preference number: 4 (lower is better)
Translates to: KTAIAKRSPEASRYTFQQSVADR*PGCSIW
Trigger: CCAAATTGAACAGCCTGGCCATCGGTCTGCGACAGA...CTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTGGCAATAGCAGTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CCA 90 bp CAGAAGCATCCAGGTACACTTTCCAACAGGCAGACCCTACCAGGAACTGGGAGACAGCAGAACTCCAATTaGGACAGTCACTTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: QKHPGTLSNRQTLPGTGRQQNSN*DSHLFQ
Trigger: CTGGAACAAGTGACTGTCCCAATTGGAGTTCTGCTG...TCTCCCAGTTCCTGGTAGGGTCTGCCTGTTGGAAAGTGTACCTGGATGCTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CCA 90 bp AAGACTGCTATTGCCAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGGCTGTGCCCCATCACTaGAATCCCCTTAGCAGCTTT +
Preference number: 4 (lower is better)
Translates to: KTAIAKRSPEASRYTFQQAVPHH*NPLSSF
Trigger: AAAGCTGCTAAGGGGATTCCAGTGATGGGGCACAGC...CTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTGGCAATAGCAGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CCA 90 bp GCTATTGCCAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGGCAGACTGTGGATGTGGTCAATaGCATCCTGAACGTTGTCCA +
Preference number: 4 (lower is better)
Translates to: AIAKRSPEASRYTFQQADCGCGQ*HPERCP
Trigger: TGGACAACGTTCAGGATGCCATTGACCACATCCACA...GTCTGCCTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTGGCAATAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CCA 90 bp AAGACTGCTATTGCCAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGACTGGTCCCCGGGCGTaGATTCTCGATGTACTGATT +
Preference number: 4 (lower is better)
Translates to: KTAIAKRSPEASRYTFQQTGPRA*ILDVLI
Trigger: AATCAGTACATCGAGAATCCACGCCCGGGGACCAGT...CTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTGGCAATAGCAGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CCA 90 bp CAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGGCAGACCCTACCAGATTCCCGGGTTTTCCTaGCTCTTTTCAGTTGGTGTT +
Preference number: 4 (lower is better)
Translates to: QTEPRSIQVHFPTGRPYQIPGFS*LFSVGV
Trigger: AACACCAACTGAAAAGAGCCAGGAAAACCCGGGAAT...CTGGTAGGGTCTGCCTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CCA 90 bp AAGACTGCTATTGCCAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGGAACACAGCATCTCCTaGATGCAGGAAGCTGCAAGC +
Preference number: 4 (lower is better)
Translates to: KTAIAKRSPEASRYTFQQEHSIS*MQEAAS
Trigger: GCTTGCAGCTTCCTGCATCCAGGAGATGCTGTGTTC...CTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTGGCAATAGCAGTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR TCA 90 bp CAGAAGCATCCAGGTACACTTTCCAACAGGCAGACCCTACCAGGAACTGGGAGACTGATTCTGCAGCACTaGTACCTGCTCAACAATAGA +
Preference number: 4 (lower is better)
Translates to: QKHPGTLSNRQTLPGTGRLILQH*YLLNNR
Trigger: TCTATTGTTGAGCAGGTATCAGTGCTGCAGAATCAG...TCTCCCAGTTCCTGGTAGGGTCTGCCTGTTGGAAAGTGTACCTGGATGCTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR TCA 90 bp GTGGGGAACATCCTGAAACTTGCATCTCCTGCTGCAGCTTGGGTTCCAGCTGCACAGCATCATTTGTGTTaGCAATGGGGACAATGTTCA +
Preference number: 4 (lower is better)
Translates to: VGNILKLASPAAAWVPAAQHHLC*QWGQCS
Trigger: TGAACATTGTCCCCATTGTCAACACAAATGATGCTG...TGCAGCTGGAACCCAAGCTGCAGCAGGAGATGCAAGTTTCAGGATGTTCCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR TCA 90 bp CAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGGCAGACCCTACCAGCAGCATCATTTGTGTTaGCAATGGGGACAATGTTCA +
Preference number: 4 (lower is better)
Translates to: QTEPRSIQVHFPTGRPYQQHHLC*QWGQCS
Trigger: TGAACATTGTCCCCATTGTCAACACAAATGATGCTG...CTGGTAGGGTCTGCCTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR TCA 90 bp CGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGGCAGACCCTACCAGGAACTGCAGGCTTTACTTCTaGAAAGAAGGTACCAACTTT +
Preference number: 4 (lower is better)
Translates to: RSPEASRYTFQQADPTRNCRLYF*KEGTNF
Trigger: AAAGTTGGTACCTTCTTTTCAGAAGTAAAGCCTGCA...GTTCCTGGTAGGGTCTGCCTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR TCA 90 bp CAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGGCAGACCCTACCAGAACAGATCAGCCAGATaGTGGATAATTTCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: QTEPRSIQVHFPTGRPYQNRSAR*WIISAL
Trigger: GAGAGCAGAAATTATCCATCATCTGGCTGATCTGTT...CTGGTAGGGTCTGCCTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR TCA 90 bp ACTGCTATTGCCAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGGCACAAATAATGGTGTCCTaGGCAGATCCCGGTGGATTA +
Preference number: 4 (lower is better)
Translates to: TAIAKRSPEASRYTFQQAQIMVS*ADPGGL
Trigger: TAATCCACCGGGATCTGCTCAGGACACCATTATTTG...TGCCTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTGGCAATAGCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR TCA 90 bp GCTGCATCACGGGGAACACAGCATCTCCTGGATGCAGGAAGCTGCAAGCATCTGCTCTCAGCATATCAATaGTCTGGTCAAATAATGGTG +
Preference number: 4 (lower is better)
Translates to: AASRGTQHLLDAGSCKHLLSAYQ*SGQIMV
Trigger: CACCATTATTTGACCAGATCATTGATATGCTGAGAG...CAGATGCTTGCAGCTTCCTGCATCCAGGAGATGCTGTGTTCCCCGTGATGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR TCA 90 bp GGGAGCCAGACTGTGCACATCAGCCAAGACTGCTATTGCCAAACGGAGCCCAGACTCTCAGCATATCAATaGTCTGGTCAAATAATGGTG +
Preference number: 4 (lower is better)
Translates to: GSQTVHISQDCYCQTEPRLSAYQ*SGQIMV
Trigger: CACCATTATTTGACCAGATCATTGATATGCTGAGAG...TCTGGGCTCCGTTTGGCAATAGCAGTCTTGGCTGATGTGCACAGTCTGGCTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR TCA 90 bp CAAGACTGCTATTGCCAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGGATTCTCGATGTACTaGTTCCCACTTCAGCTCCCA +
Preference number: 4 (lower is better)
Translates to: QDCYCQTEPRSIQVHFPTGFSMY*FPLQLP
Trigger: TGGGAGCTGAAGTGGGAATCAGTACATCGAGAATCC...TGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTGGCAATAGCAGTCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR GCA 90 bp CAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGGCAGACCCTACCAGAAACTTGACTCAACATaGTGCGATGTGGTCACTAAC +
Preference number: 4 (lower is better)
Translates to: QTEPRSIQVHFPTGRPYQKLDST*CDVVTN
Trigger: GTTAGTGACCACATCGCAGCATGTTGAGTCAAGTTT...CTGGTAGGGTCTGCCTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR GCA 90 bp ACTGTGCACATCAGCCAAGACTGCTATTGCCAAACGGAGCCCAGAAGCATCCAGTGCAGCACTGATACCTaGTCAACAATAGATGCCAAG +
Preference number: 4 (lower is better)
Translates to: TVHISQDCYCQTEPRSIQCSTDT*STIDAK
Trigger: CTTGGCATCTATTGTTGAGCAGGTATCAGTGCTGCA...CTGGATGCTTCTGGGCTCCGTTTGGCAATAGCAGTCTTGGCTGATGTGCACAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR GCA 90 bp GGGAGCCAGACTGTGCACATCAGCCAAGACTGCTATTGCCAAACGGAGCCCAGAATGATGGATAATTTCTaGTCTCTGCTCAGGTTCCAA +
Preference number: 4 (lower is better)
Translates to: GSQTVHISQDCYCQTEPRMMDNF*SLLRFQ
Trigger: TTGGAACCTGAGCAGAGAGCAGAAATTATCCATCAT...TCTGGGCTCCGTTTGGCAATAGCAGTCTTGGCTGATGTGCACAGTCTGGCTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CCA 90 bp GAAACTTGCATCTCCTGCTGCAGCTTGGGTTCCAGCTGCATCACGGGGAACACACAACATGCTGCGATGTaGTCACTAACCAAAGTATCT +
Preference number: 4 (lower is better)
Translates to: ETCISCCSLGSSCITGNTQHAAM*SLTKVS
Trigger: AGATACTTTGGTTAGTGACCACATCGCAGCATGTTG...TGTGTTCCCCGTGATGCAGCTGGAACCCAAGCTGCAGCAGGAGATGCAAGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CCA 90 bp ACTGCTATTGCCAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGGCATTGGTCACCAAAATCTaGGCAGCACAGATGCTGTAC +
Preference number: 4 (lower is better)
Translates to: TAIAKRSPEASRYTFQQALVTKI*AAQMLY
Trigger: GTACAGCATCTGTGCTGCCCAGATTTTGGTGACCAA...TGCCTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTGGCAATAGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CCA 90 bp ACTGTGCACATCAGCCAAGACTGCTATTGCCAAACGGAGCCCAGAAGCATCCAGCTTCAACTTCTTCTCTaGTATTCACCAGTTGCACGG +
Preference number: 4 (lower is better)
Translates to: TVHISQDCYCQTEPRSIQLQLLL*YSPVAR
Trigger: CCGTGCAACTGGTGAATACCAGAGAAGAAGTTGAAG...CTGGATGCTTCTGGGCTCCGTTTGGCAATAGCAGTCTTGGCTGATGTGCACAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CCA 90 bp GCTATTGCCAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGGCAGACCTGAGCAGATCCCGGTaGATTAACAAAGTCTCCAAA +
Preference number: 4 (lower is better)
Translates to: AIAKRSPEASRYTFQQADLSRSR*INKVSK
Trigger: TTTGGAGACTTTGTTAATCCACCGGGATCTGCTCAG...GTCTGCCTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTGGCAATAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CCA 90 bp ACTGTGCACATCAGCCAAGACTGCTATTGCCAAACGGAGCCCAGAAGCATCCAGCTGAGCAGATCCCGGTaGATTAACAAAGTCTCCAAA +
Preference number: 4 (lower is better)
Translates to: TVHISQDCYCQTEPRSIQLSRSR*INKVSK
Trigger: TTTGGAGACTTTGTTAATCCACCGGGATCTGCTCAG...CTGGATGCTTCTGGGCTCCGTTTGGCAATAGCAGTCTTGGCTGATGTGCACAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CCA 90 bp GGGAGCCAGACTGTGCACATCAGCCAAGACTGCTATTGCCAAACGGAGCCCAGAGATAGGAGGCAAATTTaGGGCCTGCATGAATTTTTA +
Preference number: 4 (lower is better)
Translates to: GSQTVHISQDCYCQTEPRDRRQI*GLHEFL
Trigger: TAAAAATTCATGCAGGCCCCAAATTTGCCTCCTATC...TCTGGGCTCCGTTTGGCAATAGCAGTCTTGGCTGATGTGCACAGTCTGGCTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CCA 90 bp CAGAAGCATCCAGGTACACTTTCCAACAGGCAGACCCTACCAGGAACTGGGAGAATTCCCGGGTTTTCCTaGCTCTTTTCAGTTGGTGTT +
Preference number: 4 (lower is better)
Translates to: QKHPGTLSNRQTLPGTGRIPGFS*LFSVGV
Trigger: AACACCAACTGAAAAGAGCCAGGAAAACCCGGGAAT...TCTCCCAGTTCCTGGTAGGGTCTGCCTGTTGGAAAGTGTACCTGGATGCTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR TCA 90 bp ACTGCTATTGCCAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGGCAGAAGGCTGGATACAATaGGATCTGAAGACGGTTGTA +
Preference number: 4 (lower is better)
Translates to: TAIAKRSPEASRYTFQQAEGWIQ*DLKTVV
Trigger: TACAACCGTCTTCAGATCTCATTGTATCCAGCCTTC...TGCCTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTGGCAATAGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR TCA 90 bp CAGAAGCATCCAGGTACACTTTCCAACAGGCAGACCCTACCAGGAACTGGGAGAAACATGTCTGATGACTaGAGGCTGGATACAATGAGA +
Preference number: 4 (lower is better)
Translates to: QKHPGTLSNRQTLPGTGRNMSDD*RLDTMR
Trigger: TCTCATTGTATCCAGCCTTCAGTCATCAGACATGTT...TCTCCCAGTTCCTGGTAGGGTCTGCCTGTTGGAAAGTGTACCTGGATGCTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR TCA 90 bp ACTGTGCACATCAGCCAAGACTGCTATTGCCAAACGGAGCCCAGAAGCATCCAGAACAGATCAGCCAGATaGTGGATAATTTCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: TVHISQDCYCQTEPRSIQNRSAR*WIISAL
Trigger: GAGAGCAGAAATTATCCATCATCTGGCTGATCTGTT...CTGGATGCTTCTGGGCTCCGTTTGGCAATAGCAGTCTTGGCTGATGTGCACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR TCA 90 bp AAGACTGCTATTGCCAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGTGGTCAATGGCATCCTaGACGTTGTCCACTACTTCA +
Preference number: 4 (lower is better)
Translates to: KTAIAKRSPEASRYTFQQWSMAS*TLSTTS
Trigger: TGAAGTAGTGGACAACGTTCAGGATGCCATTGACCA...CTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTGGCAATAGCAGTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR TCA 90 bp CGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGGCAGACCCTACCAGGAACTTCCATCGATTTTTGTaGCTTTCTGATGAGAATGCT +
Preference number: 4 (lower is better)
Translates to: RSPEASRYTFQQADPTRNFHRFL*LSDENA
Trigger: AGCATTCTCATCAGAAAGTCACAAAAATCGATGGAA...GTTCCTGGTAGGGTCTGCCTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR GCA 90 bp ACTGCTATTGCCAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGGCACTTGACTCAACATGCTaGGATGTGGTCACTAACCAA +
Preference number: 4 (lower is better)
Translates to: TAIAKRSPEASRYTFQQALDSTC*DVVTNQ
Trigger: TTGGTTAGTGACCACATCGCAGCATGTTGAGTCAAG...TGCCTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTGGCAATAGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR GCA 90 bp GCTATTGCCAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGGCAGACAAACTTGACTCAACATaGTGCGATGTGGTCACTAAC +
Preference number: 4 (lower is better)
Translates to: AIAKRSPEASRYTFQQADKLDST*CDVVTN
Trigger: GTTAGTGACCACATCGCAGCATGTTGAGTCAAGTTT...GTCTGCCTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTGGCAATAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR GCA 90 bp CAAGACTGCTATTGCCAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAATAACATTTACCCCCTaGAGGTCACTGTTGGGCTCA +
Preference number: 4 (lower is better)
Translates to: QDCYCQTEPRSIQVHFPTITFTP*RSLLGS
Trigger: TGAGCCCAACAGTGACCTGCAGGGGGTAAATGTTAT...TGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTGGCAATAGCAGTCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371224.7
CDS-3UTR CCA 90 bp ACTGCTATTGCCAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGGCACTTCAACTTCTTCTCTaGTATTCACCAGTTGCACGG +
Preference number: 4 (lower is better)
Translates to: TAIAKRSPEASRYTFQQALQLLL*YSPVAR
Trigger: CCGTGCAACTGGTGAATACCAGAGAAGAAGTTGAAG...TGCCTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTGGCAATAGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CCA 90 bp ACTGCTATTGCCAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGGCACTGGGAAGAGCCACGTaGAATGATCAGATCTATCAT +
Preference number: 4 (lower is better)
Translates to: TAIAKRSPEASRYTFQQALGRAT*NDQIYH
Trigger: ATGATAGATCTGATCATTCCACGTGGCTCTTCCCAG...TGCCTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTGGCAATAGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CCA 90 bp GGGAGCCAGACTGTGCACATCAGCCAAGACTGCTATTGCCAAACGGAGCCCAGAAGCATATCAATGATCTaGTCAAATAATGGTGTCCTG +
Preference number: 4 (lower is better)
Translates to: GSQTVHISQDCYCQTEPRSISMI*SNNGVL
Trigger: CAGGACACCATTATTTGACCAGATCATTGATATGCT...TCTGGGCTCCGTTTGGCAATAGCAGTCTTGGCTGATGTGCACAGTCTGGCTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR TCA 90 bp GCTATTGCCAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGGCAGACATTCTAAGGAGTTCATaGAGTGTTCCATTGAGGTTC +
Preference number: 4 (lower is better)
Translates to: AIAKRSPEASRYTFQQADILRSS*SVPLRF
Trigger: GAACCTCAATGGAACACTTCATGAACTCCTTAGAAT...GTCTGCCTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTGGCAATAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR TCA 90 bp ACTGTGCACATCAGCCAAGACTGCTATTGCCAAACGGAGCCCAGAAGCATCCAGTGCAGGCTTTACTTCTaGAAAGAAGGTACCAACTTT +
Preference number: 4 (lower is better)
Translates to: TVHISQDCYCQTEPRSIQCRLYF*KEGTNF
Trigger: AAAGTTGGTACCTTCTTTTCAGAAGTAAAGCCTGCA...CTGGATGCTTCTGGGCTCCGTTTGGCAATAGCAGTCTTGGCTGATGTGCACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR GCA 90 bp CAAGACTGCTATTGCCAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACATGCAGCACTGATACCTaGTCAACAATAGATGCCAAG +
Preference number: 4 (lower is better)
Translates to: QDCYCQTEPRSIQVHFPTCSTDT*STIDAK
Trigger: CTTGGCATCTATTGTTGAGCAGGTATCAGTGCTGCA...TGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTGGCAATAGCAGTCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CCA 90 bp CAAGACTGCTATTGCCAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACACCAGGCTGTTCAATTTaGATGTGGAGAGGCTTAAAC +
Preference number: 4 (lower is better)
Translates to: QDCYCQTEPRSIQVHFPTPGCSI*MWRGLN
Trigger: GTTTAAGCCTCTCCACATCCAAATTGAACAGCCTGG...TGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTGGCAATAGCAGTCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CCA 90 bp GAAACTTGCATCTCCTGCTGCAGCTTGGGTTCCAGCTGCATCACGGGGAACACAAGCATATCAATGATCTaGTCAAATAATGGTGTCCTG +
Preference number: 4 (lower is better)
Translates to: ETCISCCSLGSSCITGNTSISMI*SNNGVL
Trigger: CAGGACACCATTATTTGACCAGATCATTGATATGCT...TGTGTTCCCCGTGATGCAGCTGGAACCCAAGCTGCAGCAGGAGATGCAAGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR TCA 90 bp CAAGACTGCTATTGCCAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAAACATGTCTGATGACTaGAGGCTGGATACAATGAGA +
Preference number: 4 (lower is better)
Translates to: QDCYCQTEPRSIQVHFPTNMSDD*RLDTMR
Trigger: TCTCATTGTATCCAGCCTTCAGTCATCAGACATGTT...TGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTGGCAATAGCAGTCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR TCA 90 bp ACTGTGCACATCAGCCAAGACTGCTATTGCCAAACGGAGCCCAGAAGCATCCAGTTCCATCGATTTTTGTaGCTTTCTGATGAGAATGCT +
Preference number: 4 (lower is better)
Translates to: TVHISQDCYCQTEPRSIQFHRFL*LSDENA
Trigger: AGCATTCTCATCAGAAAGTCACAAAAATCGATGGAA...CTGGATGCTTCTGGGCTCCGTTTGGCAATAGCAGTCTTGGCTGATGTGCACAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR GCA 90 bp AAGACTGCTATTGCCAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGGGCAAATTTGGGGCCTaGATGAATTTTTACCTGTTC +
Preference number: 4 (lower is better)
Translates to: KTAIAKRSPEASRYTFQQGKFGA*MNFYLF
Trigger: GAACAGGTAAAAATTCATGCAGGCCCCAAATTTGCC...CTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTGGCAATAGCAGTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR GCA 90 bp AAGACTGCTATTGCCAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGTGTCCACTACTTCAATaGATAATTCCAGGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: KTAIAKRSPEASRYTFQQCPLLQ*IIPGPH
Trigger: ATGGGGACCTGGAATTATGCATTGAAGTAGTGGACA...CTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTGGCAATAGCAGTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CCA 90 bp GCTATTGCCAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGGCAGACTGTTCAATTTGGATGTaGAGAGGCTTAAACGTTTCA +
Preference number: 4 (lower is better)
Translates to: AIAKRSPEASRYTFQQADCSIWM*RGLNVS
Trigger: TGAAACGTTTAAGCCTCTCCACATCCAAATTGAACA...GTCTGCCTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTGGCAATAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR TCA 90 bp AAGACTGCTATTGCCAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGATTCTAAGGAGTTCATaGAGTGTTCCATTGAGGTTC +
Preference number: 4 (lower is better)
Translates to: KTAIAKRSPEASRYTFQQILRSS*SVPLRF
Trigger: GAACCTCAATGGAACACTTCATGAACTCCTTAGAAT...CTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTGGCAATAGCAGTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR GCA 90 bp AAGATAATTGGACTTGGCAAAGTCCCTATCGGTAGCAACTATTTTCTTACTTTAGGGTCACCACGGCACTaGCGAGCTTCACCACGATTC +
Preference number: 4 (lower is better)
Translates to: KIIGLGKVPIGSNYFLTLGSPRH*RASPRF
Trigger: GAATCGTGGTGAAGCTCGGCAGTGCCGTGGTGACCC...TAAAGTAAGAAAATAGTTGCTACCGATAGGGACTTTGCCAAGTCCAATTATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR GCA 90 bp AAGACTGCTATTGCCAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGATGATGGATAATTTCTaGTCTCTGCTCAGGTTCCAA +
Preference number: 4 (lower is better)
Translates to: KTAIAKRSPEASRYTFQQMMDNF*SLLRFQ
Trigger: TTGGAACCTGAGCAGAGAGCAGAAATTATCCATCAT...CTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTGGCAATAGCAGTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CCA 90 bp AAGACTGCTATTGCCAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGAGCATTACAGGCAGCTaGATATTCACATTTAGAGTC +
Preference number: 4 (lower is better)
Translates to: KTAIAKRSPEASRYTFQQSITGS*IFTFRV
Trigger: GACTCTAAATGTGAATATCCAGCTGCCTGTAATGCT...CTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTGGCAATAGCAGTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CCA 90 bp CAAGACTGCTATTGCCAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAAGCATTACAGGCAGCTaGATATTCACATTTAGAGTC +
Preference number: 4 (lower is better)
Translates to: QDCYCQTEPRSIQVHFPTSITGS*IFTFRV
Trigger: GACTCTAAATGTGAATATCCAGCTGCCTGTAATGCT...TGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTGGCAATAGCAGTCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CCA 90 bp AAGACTGCTATTGCCAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGGATAGGAGGCAAATTTaGGGCCTGCATGAATTTTTA +
Preference number: 4 (lower is better)
Translates to: KTAIAKRSPEASRYTFQQDRRQI*GLHEFL
Trigger: TAAAAATTCATGCAGGCCCCAAATTTGCCTCCTATC...CTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTGGCAATAGCAGTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR GCA 90 bp AAGATAATTGGACTTGGCAAAGTCCCTATCGGTAGCAACTATTTTCTTACTTTATTTTGGCGATTCGGGTaGGGCGCAAAACACGTCCCA +
Preference number: 4 (lower is better)
Translates to: KIIGLGKVPIGSNYFLTLFWRFG*GAKHVP
Trigger: TGGGACGTGTTTTGCGCCGCACCCGAATCGCCAAAA...TAAAGTAAGAAAATAGTTGCTACCGATAGGGACTTTGCCAAGTCCAATTATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CCA 90 bp AAGATAATTGGACTTGGCAAAGTCCCTATCGGTAGCAACTATTTTCTTACTTTATCCTGGGTCAGGAGGTaGAGAATCCGGTTGCTGTGT +
Preference number: 4 (lower is better)
Translates to: KIIGLGKVPIGSNYFLTLSWVRR*RIRLLC
Trigger: ACACAGCAACCGGATTCTCCACCTCCTGACCCAGGA...TAAAGTAAGAAAATAGTTGCTACCGATAGGGACTTTGCCAAGTCCAATTATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR TCA 90 bp AAGATAATTGGACTTGGCAAAGTCCCTATCGGTAGCAACTATTTTCTTACTTTACCTCCTTCCCTCCTTTaGGTAACAAGCCATTGCCAC +
Preference number: 4 (lower is better)
Translates to: KIIGLGKVPIGSNYFLTLPPSLL*VTSHCH
Trigger: GTGGCAATGGCTTGTTACTCAAAGGAGGGAAGGAGG...TAAAGTAAGAAAATAGTTGCTACCGATAGGGACTTTGCCAAGTCCAATTATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR GCA 90 bp AAGATAATTGGACTTGGCAAAGTCCCTATCGGTAGCAACTATTTTCTTACTTTACATCCGTGTGGGAGCTaGCATACTTGTGGATGTGGT +
Preference number: 4 (lower is better)
Translates to: KIIGLGKVPIGSNYFLTLHPCGS*HTCGCG
Trigger: ACCACATCCACAAGTATGGCAGCTCCCACACGGATG...TAAAGTAAGAAAATAGTTGCTACCGATAGGGACTTTGCCAAGTCCAATTATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR GCA 90 bp AAGATAATTGGACTTGGCAAAGTCCCTATCGGTAGCAACTATTTTCTTACTTTAAGCCAAGACTGCTATTaGCAAACGGAGCCCAGAAGC +
Preference number: 4 (lower is better)
Translates to: KIIGLGKVPIGSNYFLTLSQDCY*QTEPRS
Trigger: GCTTCTGGGCTCCGTTTGGCAATAGCAGTCTTGGCT...TAAAGTAAGAAAATAGTTGCTACCGATAGGGACTTTGCCAAGTCCAATTATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CCA 90 bp AAGATAATTGGACTTGGCAAAGTCCCTATCGGTAGCAACTATTTTCTTACTTTAACTGTTGGGCTCAGCTaGGGGGACAACAGCATCATT +
Preference number: 4 (lower is better)
Translates to: KIIGLGKVPIGSNYFLTLTVGLS*GDNSII
Trigger: AATGATGCTGTTGTCCCCCCAGCTGAGCCCAACAGT...TAAAGTAAGAAAATAGTTGCTACCGATAGGGACTTTGCCAAGTCCAATTATCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CCA 90 bp AAGATAATTGGACTTGGCAAAGTCCCTATCGGTAGCAACTATTTTCTTACTTTAGAACACAGCATCTCCTaGATGCAGGAAGCTGCAAGC +
Preference number: 4 (lower is better)
Translates to: KIIGLGKVPIGSNYFLTLEHSIS*MQEAAS
Trigger: GCTTGCAGCTTCCTGCATCCAGGAGATGCTGTGTTC...TAAAGTAAGAAAATAGTTGCTACCGATAGGGACTTTGCCAAGTCCAATTATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR TCA 90 bp AAGATAATTGGACTTGGCAAAGTCCCTATCGGTAGCAACTATTTTCTTACTTTAATCATCTCTCTGCCCTaGTTCTGCAGCACTGATACC +
Preference number: 4 (lower is better)
Translates to: KIIGLGKVPIGSNYFLTLIISLP*FCSTDT
Trigger: GGTATCAGTGCTGCAGAATCAGGGCAGAGAGATGAT...TAAAGTAAGAAAATAGTTGCTACCGATAGGGACTTTGCCAAGTCCAATTATCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR TCA 90 bp AAGATAATTGGACTTGGCAAAGTCCCTATCGGTAGCAACTATTTTCTTACTTTAGAATCCACATACATGTaGCAGATCCCTTCGCTGTGC +
Preference number: 4 (lower is better)
Translates to: KIIGLGKVPIGSNYFLTLESTYM*QIPSLC
Trigger: GCACAGCGAAGGGATCTGTCACATGTATGTGGATTC...TAAAGTAAGAAAATAGTTGCTACCGATAGGGACTTTGCCAAGTCCAATTATCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CCA 90 bp AAGATAATTGGACTTGGCAAAGTCCCTATCGGTAGCAACTATTTTCTTACTTTAGACAGAAGGATCTCATaGCGCAAGCGTTGTTTGCCA +
Preference number: 4 (lower is better)
Translates to: KIIGLGKVPIGSNYFLTLDRRIS*RKRCLP
Trigger: TGGCAAACAACGCTTGCGCCATGAGATCCTTCTGTC...TAAAGTAAGAAAATAGTTGCTACCGATAGGGACTTTGCCAAGTCCAATTATCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CCA 90 bp AAGATAATTGGACTTGGCAAAGTCCCTATCGGTAGCAACTATTTTCTTACTTTACCAGACACCTTTGGGTaGGTTCCATTGGCAATAACA +
Preference number: 4 (lower is better)
Translates to: KIIGLGKVPIGSNYFLTLPDTFG*VPLAIT
Trigger: TGTTATTGCCAATGGAACCCACCCAAAGGTGTCTGG...TAAAGTAAGAAAATAGTTGCTACCGATAGGGACTTTGCCAAGTCCAATTATCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CCA 90 bp AAGATAATTGGACTTGGCAAAGTCCCTATCGGTAGCAACTATTTTCTTACTTTACTGGGAAGAGCCACGTaGAATGATCAGATCTATCAT +
Preference number: 4 (lower is better)
Translates to: KIIGLGKVPIGSNYFLTLLGRAT*NDQIYH
Trigger: ATGATAGATCTGATCATTCCACGTGGCTCTTCCCAG...TAAAGTAAGAAAATAGTTGCTACCGATAGGGACTTTGCCAAGTCCAATTATCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CCA 90 bp AAGATAATTGGACTTGGCAAAGTCCCTATCGGTAGCAACTATTTTCTTACTTTATGTTCAATTTGGATGTaGAGAGGCTTAAACGTTTCA +
Preference number: 4 (lower is better)
Translates to: KIIGLGKVPIGSNYFLTLCSIWM*RGLNVS
Trigger: TGAAACGTTTAAGCCTCTCCACATCCAAATTGAACA...TAAAGTAAGAAAATAGTTGCTACCGATAGGGACTTTGCCAAGTCCAATTATCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS CCA 90 bp GTCACTAACCAAAGTATCTTCCTCACCACCGCCGCCTTCGCCCCCTaGCACTACCGCGGGTCCGCACTCCACGCCGGGCTGATTCCGGCG +
Preference number: 5 (lower is better)
Translates to: VTNQSIFLTTAAFAP*HYRGSALHAGLIPA
Trigger: CGCCGGAATCAGCCCGGCGTGGAGTGCGGACCCGCGGTAGTGCCAGGGGGCGAAGGCGGCGGTGGTGAGGAAGATACTTTGGTTAGTGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS GCA 90 bp GCCCCAGGGCCAGGCCACATTCATCCCCTCGGGTCACCACGGCACTaGCGAGCTTCACCACGATTCTCTTGGCATGCTTCAGCTCACTGC +
Preference number: 5 (lower is better)
Translates to: APGPGHIHPLGSPRH*RASPRFSWHASAHC
Trigger: GCAGTGAGCTGAAGCATGCCAAGAGAATCGTGGTGAAGCTCGGCAGTGCCGTGGTGACCCGAGGGGATGAATGTGGCCTGGCCCTGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371221.3
ENST00000371224.7
ENST00000483788.1
CDS CCA 90 bp CCCCTCGGGTCACCACGGCACTGCCGAGCTTCACCACGATTCTCTTaGCATGCTTCAGCTCACTGCGGTGGGCGAAGGACTTGCCATGTG +
Preference number: 5 (lower is better)
Translates to: PLGSPRHCRASPRFS*HASAHCGGRRTCHV
Trigger: CACATGGCAAGTCCTTCGCCCACCGCAGTGAGCTGAAGCATGCCAAGAGAATCGTGGTGAAGCTCGGCAGTGCCGTGGTGACCCGAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371221.3
ENST00000371224.7
ENST00000483788.1
CDS CCA 90 bp TTTTTGGCGATTCGGGTGCGGCGCAAAACACGTCCCACGCTGTCCTaGGAGGAGGCTGCGATCTGTCGCAGACCGATGGCCAGGCTGTTC +
Preference number: 5 (lower is better)
Translates to: FLAIRVRRKTRPTLS*EEAAICRRPMARLF
Trigger: GAACAGCCTGGCCATCGGTCTGCGACAGATCGCAGCCTCCTCCCAGGACAGCGTGGGACGTGTTTTGCGCCGCACCCGAATCGCCAAAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS GCA 90 bp TCGGGTGCGGCGCAAAACACGTCCCACGCTGTCCTGGGAGGAGGCTaGGATCTGTCGCAGACCGATGGCCAGGCTGTTCAATTTGGATGT +
Preference number: 5 (lower is better)
Translates to: SGAAQNTSHAVLGGG*DLSQTDGQAVQFGC
Trigger: ACATCCAAATTGAACAGCCTGGCCATCGGTCTGCGACAGATCGCAGCCTCCTCCCAGGACAGCGTGGGACGTGTTTTGCGCCGCACCCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS GCA 90 bp CGGGTCACCACGGCACTGCCGAGCTTCACCACGATTCTCTTGGCATaGTTCAGCTCACTGCGGTGGGCGAAGGACTTGCCATGTGTACGA +
Preference number: 5 (lower is better)
Translates to: RVTTALPSFTTILLA*FSSLRWAKDLPCVR
Trigger: TCGTACACATGGCAAGTCCTTCGCCCACCGCAGTGAGCTGAAGCATGCCAAGAGAATCGTGGTGAAGCTCGGCAGTGCCGTGGTGACCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371221.3
ENST00000371224.7
ENST00000483788.1
CDS TCA 90 bp TCTTTCAGCTGGTTCTGCCCCGAGTGGAGGGCCTGCCGCACGCTCTaGGACAGAAGGATCTCATGGCGCAAGCGTTGTTTGCCAAAGGCT +
Preference number: 5 (lower is better)
Translates to: SFSWFCPEWRACRTL*DRRISWRKRCLPKA
Trigger: AGCCTTTGGCAAACAACGCTTGCGCCATGAGATCCTTCTGTCTCAGAGCGTGCGGCAGGCCCTCCACTCGGGGCAGAACCAGCTGAAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371221.3
ENST00000371224.7
ENST00000483788.1
CDS CCA 90 bp ACCAGTTGCACGGCCTCCTTGACTCCATGGATTGAGAGAGCCTCCTaGGTCAGGAGGTGGAGAATCCGGTTGCTGTGTGCAGCCTCCTTC +
Preference number: 5 (lower is better)
Translates to: TSCTASLTPWIERAS*VRRWRIRLLCAASF
Trigger: GAAGGAGGCTGCACACAGCAACCGGATTCTCCACCTCCTGACCCAGGAGGCTCTCTCAATCCATGGAGTCAAGGAGGCCGTGCAACTGGT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371221.3
ENST00000371224.7
ENST00000485428.1
CDS-3UTR CAA 90 bp GGGAGCCAGACTGTGCACATCAGCCAAGACTGCTATTGCCAAACGGAGCCCAGACGGTGGGCGAAGGACTaGCCATGTGTACGACTGAGG +
Preference number: 5 (lower is better)
Translates to: GSQTVHISQDCYCQTEPRRWAKD*PCVRLR
Trigger: CCTCAGTCGTACACATGGCAAGTCCTTCGCCCACCG...TCTGGGCTCCGTTTGGCAATAGCAGTCTTGGCTGATGTGCACAGTCTGGCTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS GCA 90 bp GCCGCACGCTCTGAGACAGAAGGATCTCATGGCGCAAGCGTTGTTTaGCAAAGGCTACGGCTCCACTGGTCACCAGCATCATCTCTCTGC +
Preference number: 5 (lower is better)
Translates to: AARSETEGSHGASVV*QRLRLHWSPASSLC
Trigger: GCAGAGAGATGATGCTGGTGACCAGTGGAGCCGTAGCCTTTGGCAAACAACGCTTGCGCCATGAGATCCTTCTGTCTCAGAGCGTGCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371221.3
ENST00000371224.7
ENST00000483788.1
CDS GCA 90 bp TTGGGACAGTCACTTGTTCCAGTTCCAAGTTTTTGGCGATTCGGGTaGGGCGCAAAACACGTCCCACGCTGTCCTGGGAGGAGGCTGCGA +
Preference number: 5 (lower is better)
Translates to: LGQSLVPVPSFWRFG*GAKHVPRCPGRRLR
Trigger: TCGCAGCCTCCTCCCAGGACAGCGTGGGACGTGTTTTGCGCCGCACCCGAATCGCCAAAAACTTGGAACTGGAACAAGTGACTGTCCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CAA 90 bp CCAGGTACACTTTCCAACAGGCAGACCCTACCAGGAACTGGGAGACAAGAGCGGCCAGGGCAGAAGATGTaGGTTGAAGGGCTGGAACCC +
Preference number: 5 (lower is better)
Translates to: PGTLSNRQTLPGTGRQERPGQKM*VEGLEP
Trigger: GGGTTCCAGCCCTTCAACCAACATCTTCTGCCCTGG...CCGCTCTTGTCTCCCAGTTCCTGGTAGGGTCTGCCTGTTGGAAAGTGTACCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CAA 90 bp CAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGGCAGACCCTACCAGCGGTGGGCGAAGGACTaGCCATGTGTACGACTGAGG +
Preference number: 5 (lower is better)
Translates to: QTEPRSIQVHFPTGRPYQRWAKD*PCVRLR
Trigger: CCTCAGTCGTACACATGGCAAGTCCTTCGCCCACCG...CTGGTAGGGTCTGCCTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CAA 90 bp CCAGGTACACTTTCCAACAGGCAGACCCTACCAGGAACTGGGAGACAAGAGCGGTGGCGCAAGCGTTGTTaGCCAAAGGCTACGGCTCCA +
Preference number: 5 (lower is better)
Translates to: PGTLSNRQTLPGTGRQERWRKRC*PKATAP
Trigger: TGGAGCCGTAGCCTTTGGCAAACAACGCTTGCGCCA...CCGCTCTTGTCTCCCAGTTCCTGGTAGGGTCTGCCTGTTGGAAAGTGTACCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CAA 90 bp CCAGGTACACTTTCCAACAGGCAGACCCTACCAGGAACTGGGAGACAAGAGCGGTCCAGTTCCAAGTTTTaGGCGATTCGGGTGCGGCGC +
Preference number: 5 (lower is better)
Translates to: PGTLSNRQTLPGTGRQERSSSKF*AIRVRR
Trigger: GCGCCGCACCCGAATCGCCAAAAACTTGGAACTGGA...CCGCTCTTGTCTCCCAGTTCCTGGTAGGGTCTGCCTGTTGGAAAGTGTACCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS CCA 90 bp GTCCCACGCTGTCCTGGGAGGAGGCTGCGATCTGTCGCAGACCGATaGCCAGGCTGTTCAATTTGGATGTGGAGAGGCTTAAACGTTTCA +
Preference number: 5 (lower is better)
Translates to: VPRCPGRRLRSVADR*PGCSIWMWRGLNVS
Trigger: TGAAACGTTTAAGCCTCTCCACATCCAAATTGAACAGCCTGGCCATCGGTCTGCGACAGATCGCAGCCTCCTCCCAGGACAGCGTGGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS CCA 90 bp CCCTCGCAGCAGCCACTTAGTAGTAAGCAGTCCCTCAAGTCCTACTaGTCCCCGGGCGTGGATTCTCGATGTACTGATTCCCACTTCAGC +
Preference number: 5 (lower is better)
Translates to: PSQQPLSSKQSLKSY*SPGVDSRCTDSHFS
Trigger: GCTGAAGTGGGAATCAGTACATCGAGAATCCACGCCCGGGGACCAGTAGGACTTGAGGGACTGCTTACTACTAAGTGGCTGCTGCGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CAA 90 bp CCAGGTACACTTTCCAACAGGCAGACCCTACCAGGAACTGGGAGACAAGAGCGGAGGGCTGCTTTCACCTaGGCTTCCATGCCACCCATT +
Preference number: 5 (lower is better)
Translates to: PGTLSNRQTLPGTGRQERRAAFT*ASMPPI
Trigger: AATGGGTGGCATGGAAGCCAAGGTGAAAGCAGCCCT...CCGCTCTTGTCTCCCAGTTCCTGGTAGGGTCTGCCTGTTGGAAAGTGTACCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CAA 90 bp CAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGGCAGACCCTACCAGAACAGAAGTGCCACCTaGCAAAGCCCAGAGGGCTGC +
Preference number: 5 (lower is better)
Translates to: QTEPRSIQVHFPTGRPYQNRSAT*QSPEGC
Trigger: GCAGCCCTCTGGGCTTTGCAAGGTGGCACTTCTGTT...CTGGTAGGGTCTGCCTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CAA 90 bp GAAACTTGCATCTCCTGCTGCAGCTTGGGTTCCAGCTGCATCACGGGGAACACATCCAGTTCCAAGTTTTaGGCGATTCGGGTGCGGCGC +
Preference number: 5 (lower is better)
Translates to: ETCISCCSLGSSCITGNTSSSKF*AIRVRR
Trigger: GCGCCGCACCCGAATCGCCAAAAACTTGGAACTGGA...TGTGTTCCCCGTGATGCAGCTGGAACCCAAGCTGCAGCAGGAGATGCAAGTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS CCA 90 bp CCGAGCTTCACCACGATTCTCTTGGCATGCTTCAGCTCACTGCGGTaGGCGAAGGACTTGCCATGTGTACGACTGAGGGGTACAGTGATA +
Preference number: 5 (lower is better)
Translates to: PSFTTILLACFSSLR*AKDLPCVRLRGTVI
Trigger: TATCACTGTACCCCTCAGTCGTACACATGGCAAGTCCTTCGCCCACCGCAGTGAGCTGAAGCATGCCAAGAGAATCGTGGTGAAGCTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371221.3
ENST00000371224.7
ENST00000483788.1
CDS CCA 90 bp GCAGAACTCCAATTGGGACAGTCACTTGTTCCAGTTCCAAGTTTTTaGCGATTCGGGTGCGGCGCAAAACACGTCCCACGCTGTCCTGGG +
Preference number: 5 (lower is better)
Translates to: AELQLGQSLVPVPSF*RFGCGAKHVPRCPG
Trigger: CCCAGGACAGCGTGGGACGTGTTTTGCGCCGCACCCGAATCGCCAAAAACTTGGAACTGGAACAAGTGACTGTCCCAATTGGAGTTCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CAA 90 bp CAGAAGCATCCAGGTACACTTTCCAACAGGCAGACCCTACCAGGAACTGGGAGACCAGGGCAGAAGATGTaGGTTGAAGGGCTGGAACCC +
Preference number: 5 (lower is better)
Translates to: QKHPGTLSNRQTLPGTGRPGQKM*VEGLEP
Trigger: GGGTTCCAGCCCTTCAACCAACATCTTCTGCCCTGG...TCTCCCAGTTCCTGGTAGGGTCTGCCTGTTGGAAAGTGTACCTGGATGCTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CAA 90 bp ACTGTGCACATCAGCCAAGACTGCTATTGCCAAACGGAGCCCAGAAGCATCCAGCTCATGGCGCAAGCGTaGTTTGCCAAAGGCTACGGC +
Preference number: 5 (lower is better)
Translates to: TVHISQDCYCQTEPRSIQLMAQA*FAKGYG
Trigger: GCCGTAGCCTTTGGCAAACAACGCTTGCGCCATGAG...CTGGATGCTTCTGGGCTCCGTTTGGCAATAGCAGTCTTGGCTGATGTGCACAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CAA 90 bp CAGAAGCATCCAGGTACACTTTCCAACAGGCAGACCCTACCAGGAACTGGGAGAAACAGAAGTGCCACCTaGCAAAGCCCAGAGGGCTGC +
Preference number: 5 (lower is better)
Translates to: QKHPGTLSNRQTLPGTGRNRSAT*QSPEGC
Trigger: GCAGCCCTCTGGGCTTTGCAAGGTGGCACTTCTGTT...TCTCCCAGTTCCTGGTAGGGTCTGCCTGTTGGAAAGTGTACCTGGATGCTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CAA 90 bp CCAGGTACACTTTCCAACAGGCAGACCCTACCAGGAACTGGGAGACAAGAGCGGTGGGAGCTGCCATACTaGTGGATGTGGTCAATGGCA +
Preference number: 5 (lower is better)
Translates to: PGTLSNRQTLPGTGRQERWELPY*WMWSMA
Trigger: TGCCATTGACCACATCCACAAGTATGGCAGCTCCCA...CCGCTCTTGTCTCCCAGTTCCTGGTAGGGTCTGCCTGTTGGAAAGTGTACCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CAA 90 bp GTGGGGAACATCCTGAAACTTGCATCTCCTGCTGCAGCTTGGGTTCCAGCTGCACAGCCAAGACTGCTATaGCCAAACGGAGCCCAGAAG +
Preference number: 5 (lower is better)
Translates to: VGNILKLASPAAAWVPAAQPRLL*PNGAQK
Trigger: CTTCTGGGCTCCGTTTGGCAATAGCAGTCTTGGCTG...TGCAGCTGGAACCCAAGCTGCAGCAGGAGATGCAAGTTTCAGGATGTTCCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CAA 90 bp GAAACTTGCATCTCCTGCTGCAGCTTGGGTTCCAGCTGCATCACGGGGAACACACAGCCAAGACTGCTATaGCCAAACGGAGCCCAGAAG +
Preference number: 5 (lower is better)
Translates to: ETCISCCSLGSSCITGNTQPRLL*PNGAQK
Trigger: CTTCTGGGCTCCGTTTGGCAATAGCAGTCTTGGCTG...TGTGTTCCCCGTGATGCAGCTGGAACCCAAGCTGCAGCAGGAGATGCAAGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS GCA 90 bp ACCTTTGGGTGGGTTCCATTGGCAATAACAACAGAAGTGCCACCTTaGAAAGCCCAGAGGGCTGCTTTCACCTTGGCTTCCATGCCACCC +
Preference number: 5 (lower is better)
Translates to: TFGWVPLAITTEVPP*KAQRAAFTLASMPP
Trigger: GGGTGGCATGGAAGCCAAGGTGAAAGCAGCCCTCTGGGCTTTGCAAGGTGGCACTTCTGTTGTTATTGCCAATGGAACCCACCCAAAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371221.3
ENST00000371224.7
ENST00000489386.1
CDS GCA 90 bp CCACTTCAGCTCCCAGTCCAAAGCGGTAACCATCAGAAAAGCGAGTaGTGGCATTCCAGAACACACAGGCACTGTCTACGTGCTGCAGGA +
Preference number: 5 (lower is better)
Translates to: PLQLPVQSGNHQKSE*WHSRTHRHCLRAAG
Trigger: TCCTGCAGCACGTAGACAGTGCCTGTGTGTTCTGGAATGCCAGCACTCGCTTTTCTGATGGTTACCGCTTTGGACTGGGAGCTGAAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS CCA 90 bp GGATCTCATGGCGCAAGCGTTGTTTGCCAAAGGCTACGGCTCCACTaGTCACCAGCATCATCTCTCTGCCCTGATTCTGCAGCACTGATA +
Preference number: 5 (lower is better)
Translates to: GSHGASVVCQRLRLH*SPASSLCPDSAALI
Trigger: TATCAGTGCTGCAGAATCAGGGCAGAGAGATGATGCTGGTGACCAGTGGAGCCGTAGCCTTTGGCAAACAACGCTTGCGCCATGAGATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371221.3
ENST00000371224.7
ENST00000483788.1
CDS CCA 90 bp CTGCGATCTGTCGCAGACCGATGGCCAGGCTGTTCAATTTGGATGTaGAGAGGCTTAAACGTTTCAGCAGAGGAGCTGCAAGTCTCCCCT +
Preference number: 5 (lower is better)
Translates to: LRSVADRWPGCSIWM*RGLNVSAEELQVSP
Trigger: AGGGGAGACTTGCAGCTCCTCTGCTGAAACGTTTAAGCCTCTCCACATCCAAATTGAACAGCCTGGCCATCGGTCTGCGACAGATCGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS CCA 90 bp AGGAGGCTGCGATCTGTCGCAGACCGATGGCCAGGCTGTTCAATTTaGATGTGGAGAGGCTTAAACGTTTCAGCAGAGGAGCTGCAAGTC +
Preference number: 5 (lower is better)
Translates to: RRLRSVADRWPGCSI*MWRGLNVSAEELQV
Trigger: GACTTGCAGCTCCTCTGCTGAAACGTTTAAGCCTCTCCACATCCAAATTGAACAGCCTGGCCATCGGTCTGCGACAGATCGCAGCCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS CCA 90 bp ACTTCTTCTCTGGTATTCACCAGTTGCACGGCCTCCTTGACTCCATaGATTGAGAGAGCCTCCTGGGTCAGGAGGTGGAGAATCCGGTTG +
Preference number: 5 (lower is better)
Translates to: TSSLVFTSCTASLTP*IERASWVRRWRIRL
Trigger: CAACCGGATTCTCCACCTCCTGACCCAGGAGGCTCTCTCAATCCATGGAGTCAAGGAGGCCGTGCAACTGGTGAATACCAGAGAAGAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371221.3
ENST00000371224.7
ENST00000485428.1
CDS CCA 90 bp ATCCCTTCGCTGTGCCCCATCACTGGAATCCCCTTAGCAGCTTTCTaGATGTCTCTGACCAGCTGGGAAGAGCCACGTGGAATGATCAGA +
Preference number: 5 (lower is better)
Translates to: IPSLCPITGIPLAAF*MSLTSWEEPRGMIR
Trigger: TCTGATCATTCCACGTGGCTCTTCCCAGCTGGTCAGAGACATCCAGAAAGCTGCTAAGGGGATTCCAGTGATGGGGCACAGCGAAGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371221.3
ENST00000371224.7
ENST00000485428.1
CDS-3UTR CAA 90 bp GAAACTTGCATCTCCTGCTGCAGCTTGGGTTCCAGCTGCATCACGGGGAACACACCCACAGCGGTAAACTaGACTCAACATGCTGCGATG +
Preference number: 5 (lower is better)
Translates to: ETCISCCSLGSSCITGNTPTAVN*TQHAAM
Trigger: CATCGCAGCATGTTGAGTCAAGTTTACCGCTGTGGG...TGTGTTCCCCGTGATGCAGCTGGAACCCAAGCTGCAGCAGGAGATGCAAGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CAA 90 bp GCTATTGCCAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGGCAGACGGCAGAAGATGTTGGTaGAAGGGCTGGAACCCACAG +
Preference number: 5 (lower is better)
Translates to: AIAKRSPEASRYTFQQADGRRCW*KGWNPQ
Trigger: CTGTGGGTTCCAGCCCTTCAACCAACATCTTCTGCC...GTCTGCCTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTGGCAATAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CAA 90 bp GCTGCATCACGGGGAACACAGCATCTCCTGGATGCAGGAAGCTGCAAGCATCTGTTCACCACGATTCTCTaGGCATGCTTCAGCTCACTG +
Preference number: 5 (lower is better)
Translates to: AASRGTQHLLDAGSCKHLFTTIL*ACFSSL
Trigger: CAGTGAGCTGAAGCATGCCAAGAGAATCGTGGTGAA...CAGATGCTTGCAGCTTCCTGCATCCAGGAGATGCTGTGTTCCCCGTGATGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CAA 90 bp ACTGCTATTGCCAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGGCACGTGCCCAGACACCTTaGGGTGGGTTCCATTGGCAA +
Preference number: 5 (lower is better)
Translates to: TAIAKRSPEASRYTFQQARAQTP*GGFHWQ
Trigger: TTGCCAATGGAACCCACCCAAAGGTGTCTGGGCACG...TGCCTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTGGCAATAGCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CAA 90 bp ACTGCTATTGCCAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGGCAAGGTGGAGAATCCGGTaGCTGTGTGCAGCCTCCTTC +
Preference number: 5 (lower is better)
Translates to: TAIAKRSPEASRYTFQQARWRIR*LCAASF
Trigger: GAAGGAGGCTGCACACAGCAACCGGATTCTCCACCT...TGCCTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTGGCAATAGCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CAA 90 bp CAGAAGCATCCAGGTACACTTTCCAACAGGCAGACCCTACCAGGAACTGGGAGATCTGGTATTCACCAGTaGCACGGCCTCCTTGACTCC +
Preference number: 5 (lower is better)
Translates to: QKHPGTLSNRQTLPGTGRSGIHQ*HGLLDS
Trigger: GGAGTCAAGGAGGCCGTGCAACTGGTGAATACCAGA...TCTCCCAGTTCCTGGTAGGGTCTGCCTGTTGGAAAGTGTACCTGGATGCTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CAA 90 bp CAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGGCAGACCCTACCAGTGGGAGCTGCCATACTaGTGGATGTGGTCAATGGCA +
Preference number: 5 (lower is better)
Translates to: QTEPRSIQVHFPTGRPYQWELPY*WMWSMA
Trigger: TGCCATTGACCACATCCACAAGTATGGCAGCTCCCA...CTGGTAGGGTCTGCCTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS TCA 90 bp AGCCTGGTGACCTTATCAACACTGGCCTCGGAATCCACATACATGTaGCAGATCCCTTCGCTGTGCCCCATCACTGGAATCCCCTTAGCA +
Preference number: 5 (lower is better)
Translates to: SLVTLSTLASESTYM*QIPSLCPITGIPLA
Trigger: TGCTAAGGGGATTCCAGTGATGGGGCACAGCGAAGGGATCTGTCACATGTATGTGGATTCCGAGGCCAGTGTTGATAAGGTCACCAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371221.3
ENST00000371224.7
ENST00000485428.1
CDS GCA 90 bp AAGCGAGTGCTGGCATTCCAGAACACACAGGCACTGTCTACGTGCTaGAGGAAGAACTCCGCTGTGTTTTCGTCCTCTGTGACGATGACA +
Preference number: 5 (lower is better)
Translates to: KRVLAFQNTQALSTC*RKNSAVFSSSVTMT
Trigger: TGTCATCGTCACAGAGGACGAAAACACAGCGGAGTTCTTCCTGCAGCACGTAGACAGTGCCTGTGTGTTCTGGAATGCCAGCACTCGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS GCA 90 bp GAAAAGCGAGTGCTGGCATTCCAGAACACACAGGCACTGTCTACGTaGTGCAGGAAGAACTCCGCTGTGTTTTCGTCCTCTGTGACGATG +
Preference number: 5 (lower is better)
Translates to: EKRVLAFQNTQALST*CRKNSAVFSSSVTM
Trigger: CATCGTCACAGAGGACGAAAACACAGCGGAGTTCTTCCTGCAGCACGTAGACAGTGCCTGTGTGTTCTGGAATGCCAGCACTCGCTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS CCA 90 bp CTTCAGCTCCCAGTCCAAAGCGGTAACCATCAGAAAAGCGAGTGCTaGCATTCCAGAACACACAGGCACTGTCTACGTGCTGCAGGAAGA +
Preference number: 5 (lower is better)
Translates to: LQLPVQSGNHQKSEC*HSRTHRHCLRAAGR
Trigger: TCTTCCTGCAGCACGTAGACAGTGCCTGTGTGTTCTGGAATGCCAGCACTCGCTTTTCTGATGGTTACCGCTTTGGACTGGGAGCTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS CCA 90 bp CACTTAGTAGTAAGCAGTCCCTCAAGTCCTACTGGTCCCCGGGCGTaGATTCTCGATGTACTGATTCCCACTTCAGCTCCCAGTCCAAAG +
Preference number: 5 (lower is better)
Translates to: HLVVSSPSSPTGPRA*ILDVLIPTSAPSPK
Trigger: CTTTGGACTGGGAGCTGAAGTGGGAATCAGTACATCGAGAATCCACGCCCGGGGACCAGTAGGACTTGAGGGACTGCTTACTACTAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CAA 90 bp CAAGACTGCTATTGCCAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACACTCATGGCGCAAGCGTaGTTTGCCAAAGGCTACGGC +
Preference number: 5 (lower is better)
Translates to: QDCYCQTEPRSIQVHFPTLMAQA*FAKGYG
Trigger: GCCGTAGCCTTTGGCAAACAACGCTTGCGCCATGAG...TGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTGGCAATAGCAGTCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CAA 90 bp AAGACTGCTATTGCCAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGCGTGCCCAGACACCTTaGGGTGGGTTCCATTGGCAA +
Preference number: 5 (lower is better)
Translates to: KTAIAKRSPEASRYTFQQRAQTP*GGFHWQ
Trigger: TTGCCAATGGAACCCACCCAAAGGTGTCTGGGCACG...CTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTGGCAATAGCAGTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CAA 90 bp CAAGACTGCTATTGCCAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAAGGTGGAGAATCCGGTaGCTGTGTGCAGCCTCCTTC +
Preference number: 5 (lower is better)
Translates to: QDCYCQTEPRSIQVHFPTRWRIR*LCAASF
Trigger: GAAGGAGGCTGCACACAGCAACCGGATTCTCCACCT...TGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTGGCAATAGCAGTCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CAA 90 bp CAGAAGCATCCAGGTACACTTTCCAACAGGCAGACCCTACCAGGAACTGGGAGAAGTTGCACGGCCTCCTaGACTCCATGGATTGAGAGA +
Preference number: 5 (lower is better)
Translates to: QKHPGTLSNRQTLPGTGRSCTAS*TPWIER
Trigger: TCTCTCAATCCATGGAGTCAAGGAGGCCGTGCAACT...TCTCCCAGTTCCTGGTAGGGTCTGCCTGTTGGAAAGTGTACCTGGATGCTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CAA 90 bp CAAGACTGCTATTGCCAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAATCTCCTGCTGCAGCTaGGGTTCCAGCTGCATCACG +
Preference number: 5 (lower is better)
Translates to: QDCYCQTEPRSIQVHFPTISCCS*GSSCIT
Trigger: CGTGATGCAGCTGGAACCCAAGCTGCAGCAGGAGAT...TGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTGGCAATAGCAGTCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CAA 90 bp AAGACTGCTATTGCCAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGATCTCCTGCTGCAGCTaGGGTTCCAGCTGCATCACG +
Preference number: 5 (lower is better)
Translates to: KTAIAKRSPEASRYTFQQISCCS*GSSCIT
Trigger: CGTGATGCAGCTGGAACCCAAGCTGCAGCAGGAGAT...CTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTGGCAATAGCAGTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS CCA 90 bp TTCCCCTCCACAATGTCTGTGATGACGTGCCCAGACACCTTTGGGTaGGTTCCATTGGCAATAACAACAGAAGTGCCACCTTGCAAAGCC +
Preference number: 5 (lower is better)
Translates to: FPSTMSVMTCPDTFG*VPLAITTEVPPCKA
Trigger: GGCTTTGCAAGGTGGCACTTCTGTTGTTATTGCCAATGGAACCCACCCAAAGGTGTCTGGGCACGTCATCACAGACATTGTGGAGGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371221.3
ENST00000371224.7
ENST00000489386.1
CDS-3UTR CAA 90 bp GGGAGCCAGACTGTGCACATCAGCCAAGACTGCTATTGCCAAACGGAGCCCAGACCTCTAAGACTGGAATaGCCATTTCTTTCAGCTGGT +
Preference number: 5 (lower is better)
Translates to: GSQTVHISQDCYCQTEPRPLRLE*PFLSAG
Trigger: ACCAGCTGAAAGAAATGGCAATTCCAGTCTTAGAGG...TCTGGGCTCCGTTTGGCAATAGCAGTCTTGGCTGATGTGCACAGTCTGGCTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CAA 90 bp GGGAGCCAGACTGTGCACATCAGCCAAGACTGCTATTGCCAAACGGAGCCCAGAATTCCCACTCTAGACTaGGTTCCAAATGTCACAGAC +
Preference number: 5 (lower is better)
Translates to: GSQTVHISQDCYCQTEPRIPTLD*VPNVTD
Trigger: GTCTGTGACATTTGGAACCAAGTCTAGAGTGGGAAT...TCTGGGCTCCGTTTGGCAATAGCAGTCTTGGCTGATGTGCACAGTCTGGCTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CAA 90 bp GCTGCATCACGGGGAACACAGCATCTCCTGGATGCAGGAAGCTGCAAGCATCTGATTCCCACTCTAGACTaGGTTCCAAATGTCACAGAC +
Preference number: 5 (lower is better)
Translates to: AASRGTQHLLDAGSCKHLIPTLD*VPNVTD
Trigger: GTCTGTGACATTTGGAACCAAGTCTAGAGTGGGAAT...CAGATGCTTGCAGCTTCCTGCATCCAGGAGATGCTGTGTTCCCCGTGATGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CAA 90 bp GGGAGCCAGACTGTGCACATCAGCCAAGACTGCTATTGCCAAACGGAGCCCAGATTTGGGTGGGTTCCATaGGCAATAACAACAGAAGTG +
Preference number: 5 (lower is better)
Translates to: GSQTVHISQDCYCQTEPRFGWVP*AITTEV
Trigger: CACTTCTGTTGTTATTGCCAATGGAACCCACCCAAA...TCTGGGCTCCGTTTGGCAATAGCAGTCTTGGCTGATGTGCACAGTCTGGCTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CAA 90 bp CAGAAGCATCCAGGTACACTTTCCAACAGGCAGACCCTACCAGGAACTGGGAGACCAGCAGAACTCCAATaGGGACAGTCACTTGTTCCA +
Preference number: 5 (lower is better)
Translates to: QKHPGTLSNRQTLPGTGRPAELQ*GQSLVP
Trigger: TGGAACAAGTGACTGTCCCAATTGGAGTTCTGCTGG...TCTCCCAGTTCCTGGTAGGGTCTGCCTGTTGGAAAGTGTACCTGGATGCTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CAA 90 bp ACTGCTATTGCCAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGGCAGCCTCCTTCCCTCCTTaGAGTAACAAGCCATTGCCA +
Preference number: 5 (lower is better)
Translates to: TAIAKRSPEASRYTFQQAASFPP*SNKPLP
Trigger: TGGCAATGGCTTGTTACTCAAAGGAGGGAAGGAGGC...TGCCTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTGGCAATAGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CAA 90 bp ACTGCTATTGCCAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGGCAAGTTGCACGGCCTCCTaGACTCCATGGATTGAGAGA +
Preference number: 5 (lower is better)
Translates to: TAIAKRSPEASRYTFQQASCTAS*TPWIER
Trigger: TCTCTCAATCCATGGAGTCAAGGAGGCCGTGCAACT...TGCCTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTGGCAATAGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CAA 90 bp ACTGCTATTGCCAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGGCATTCACCACGATTCTCTaGGCATGCTTCAGCTCACTG +
Preference number: 5 (lower is better)
Translates to: TAIAKRSPEASRYTFQQAFTTIL*ACFSSL
Trigger: CAGTGAGCTGAAGCATGCCAAGAGAATCGTGGTGAA...TGCCTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTGGCAATAGCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CAA 90 bp CAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGGCAGACCCTACCAGTTTGGGTGGGTTCCATaGGCAATAACAACAGAAGTG +
Preference number: 5 (lower is better)
Translates to: QTEPRSIQVHFPTGRPYQFGWVP*AITTEV
Trigger: CACTTCTGTTGTTATTGCCAATGGAACCCACCCAAA...CTGGTAGGGTCTGCCTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CAA 90 bp CCAGGTACACTTTCCAACAGGCAGACCCTACCAGGAACTGGGAGACAAGAGCGGTCCTCCAAGTCTTTTTaGTTGGCTAACAGGATCTCA +
Preference number: 5 (lower is better)
Translates to: PGTLSNRQTLPGTGRQERSSKSF*LANRIS
Trigger: TGAGATCCTGTTAGCCAACAAAAAAGACTTGGAGGA...CCGCTCTTGTCTCCCAGTTCCTGGTAGGGTCTGCCTGTTGGAAAGTGTACCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CAA 90 bp GTGGGGAACATCCTGAAACTTGCATCTCCTGCTGCAGCTTGGGTTCCAGCTGCATTGAGTAACAAGCCATaGCCACTTGCGATAGCCAAA +
Preference number: 5 (lower is better)
Translates to: VGNILKLASPAAAWVPAALSNKP*PLAIAK
Trigger: TTTGGCTATCGCAAGTGGCAATGGCTTGTTACTCAA...TGCAGCTGGAACCCAAGCTGCAGCAGGAGATGCAAGTTTCAGGATGTTCCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS TCA 90 bp TCCGTGTGGGAGCTGCCATACTTGTGGATGTGGTCAATGGCATCCTaGACGTTGTCCACTACTTCAATGCATAATTCCAGGTCCCCATAC +
Preference number: 5 (lower is better)
Translates to: SVWELPYLWMWSMAS*TLSTTSMHNSRSPY
Trigger: GTATGGGGACCTGGAATTATGCATTGAAGTAGTGGACAACGTTCAGGATGCCATTGACCACATCCACAAGTATGGCAGCTCCCACACGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371221.3
ENST00000371224.7
ENST00000485428.1
CDS CCA 90 bp TTTCTTCCCCTCCACAATGTCTGTGATGACGTGCCCAGACACCTTTaGGTGGGTTCCATTGGCAATAACAACAGAAGTGCCACCTTGCAA +
Preference number: 5 (lower is better)
Translates to: FLPLHNVCDDVPRHL*VGSIGNNNRSATLQ
Trigger: TTGCAAGGTGGCACTTCTGTTGTTATTGCCAATGGAACCCACCCAAAGGTGTCTGGGCACGTCATCACAGACATTGTGGAGGGGAAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371221.3
ENST00000371224.7
ENST00000489386.1
CDS-3UTR CAA 90 bp CAAGACTGCTATTGCCAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAAAGACGGTTGTACACTaGACCCAGGGCAGAAGATGT +
Preference number: 5 (lower is better)
Translates to: QDCYCQTEPRSIQVHFPTKTVVH*TQGRRC
Trigger: ACATCTTCTGCCCTGGGTCAAGTGTACAACCGTCTT...TGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTGGCAATAGCAGTCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CAA 90 bp CAGAAGCATCCAGGTACACTTTCCAACAGGCAGACCCTACCAGGAACTGGGAGAGTGATAAACGGGATGTaGCTCCAAGAACGAACATGT +
Preference number: 5 (lower is better)
Translates to: QKHPGTLSNRQTLPGTGRVINGM*LQERTC
Trigger: ACATGTTCGTTCTTGGAGCAACATCCCGTTTATCAC...TCTCCCAGTTCCTGGTAGGGTCTGCCTGTTGGAAAGTGTACCTGGATGCTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CAA 90 bp CAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGGCAGACCCTACCAGTCATGGAAATCCAAATaGGTCACCAAAATCTGGGCA +
Preference number: 5 (lower is better)
Translates to: QTEPRSIQVHFPTGRPYQSWKSK*VTKIWA
Trigger: TGCCCAGATTTTGGTGACCAATTTGGATTTCCATGA...CTGGTAGGGTCTGCCTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CAA 90 bp GAAACTTGCATCTCCTGCTGCAGCTTGGGTTCCAGCTGCATCACGGGGAACACAACAGCATCATTTGTGTaGACAATGGGGACAATGTTC +
Preference number: 5 (lower is better)
Translates to: ETCISCCSLGSSCITGNTTASFV*TMGTMF
Trigger: GAACATTGTCCCCATTGTCAACACAAATGATGCTGT...TGTGTTCCCCGTGATGCAGCTGGAACCCAAGCTGCAGCAGGAGATGCAAGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CAA 90 bp GTGGGGAACATCCTGAAACTTGCATCTCCTGCTGCAGCTTGGGTTCCAGCTGCATCCTCCAAGTCTTTTTaGTTGGCTAACAGGATCTCA +
Preference number: 5 (lower is better)
Translates to: VGNILKLASPAAAWVPAASSKSF*LANRIS
Trigger: TGAGATCCTGTTAGCCAACAAAAAAGACTTGGAGGA...TGCAGCTGGAACCCAAGCTGCAGCAGGAGATGCAAGTTTCAGGATGTTCCCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CAA 90 bp ACTGCTATTGCCAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGGCAGCCAGGCTGTTCAATTaGGATGTGGAGAGGCTTAAA +
Preference number: 5 (lower is better)
Translates to: TAIAKRSPEASRYTFQQAARLFN*DVERLK
Trigger: TTTAAGCCTCTCCACATCCAAATTGAACAGCCTGGC...TGCCTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTGGCAATAGCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CAA 90 bp AAGACTGCTATTGCCAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGCCAGCAGAACTCCAATaGGGACAGTCACTTGTTCCA +
Preference number: 5 (lower is better)
Translates to: KTAIAKRSPEASRYTFQQPAELQ*GQSLVP
Trigger: TGGAACAAGTGACTGTCCCAATTGGAGTTCTGCTGG...CTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTGGCAATAGCAGTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CAA 90 bp GCTGCATCACGGGGAACACAGCATCTCCTGGATGCAGGAAGCTGCAAGCATCTGATCAGATCTATCATTTaGTCTAGGCGGCAAAGATCT +
Preference number: 5 (lower is better)
Translates to: AASRGTQHLLDAGSCKHLIRSII*SRRQRS
Trigger: AGATCTTTGCCGCCTAGACAAAATGATAGATCTGAT...CAGATGCTTGCAGCTTCCTGCATCCAGGAGATGCTGTGTTCCCCGTGATGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CAA 90 bp ACTGCTATTGCCAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGGCAGTGATAAACGGGATGTaGCTCCAAGAACGAACATGT +
Preference number: 5 (lower is better)
Translates to: TAIAKRSPEASRYTFQQAVINGM*LQERTC
Trigger: ACATGTTCGTTCTTGGAGCAACATCCCGTTTATCAC...TGCCTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTGGCAATAGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CAA 90 bp GAAACTTGCATCTCCTGCTGCAGCTTGGGTTCCAGCTGCATCACGGGGAACACAAATTGGGACAGTCACTaGTTCCAGTTCCAAGTTTTT +
Preference number: 5 (lower is better)
Translates to: ETCISCCSLGSSCITGNTNWDSH*FQFQVF
Trigger: AAAAACTTGGAACTGGAACAAGTGACTGTCCCAATT...TGTGTTCCCCGTGATGCAGCTGGAACCCAAGCTGCAGCAGGAGATGCAAGTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS GCA 90 bp AAGAAGGTACCAACTTTCTTCCCCTCCACAATGTCTGTGATGACGTaGCCAGACACCTTTGGGTGGGTTCCATTGGCAATAACAACAGAA +
Preference number: 5 (lower is better)
Translates to: KKVPTFFPSTMSVMT*PDTFGWVPLAITTE
Trigger: TTCTGTTGTTATTGCCAATGGAACCCACCCAAAGGTGTCTGGGCACGTCATCACAGACATTGTGGAGGGGAAGAAAGTTGGTACCTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371221.3
ENST00000371224.7
ENST00000489386.1
CDS CCA 90 bp ATCACTGGAATCCCCTTAGCAGCTTTCTGGATGTCTCTGACCAGCTaGGAAGAGCCACGTGGAATGATCAGATCTATCATTTTGTCTAGG +
Preference number: 5 (lower is better)
Translates to: ITGIPLAAFWMSLTS*EEPRGMIRSIILSR
Trigger: CCTAGACAAAATGATAGATCTGATCATTCCACGTGGCTCTTCCCAGCTGGTCAGAGACATCCAGAAAGCTGCTAAGGGGATTCCAGTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371221.3
ENST00000371224.7
ENST00000485428.1
CDS-3UTR CAA 90 bp AAGACTGCTATTGCCAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGCCTCTAAGACTGGAATaGCCATTTCTTTCAGCTGGT +
Preference number: 5 (lower is better)
Translates to: KTAIAKRSPEASRYTFQQPLRLE*PFLSAG
Trigger: ACCAGCTGAAAGAAATGGCAATTCCAGTCTTAGAGG...CTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTGGCAATAGCAGTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CAA 90 bp ACTGTGCACATCAGCCAAGACTGCTATTGCCAAACGGAGCCCAGAAGCATCCAGAATTGGGACAGTCACTaGTTCCAGTTCCAAGTTTTT +
Preference number: 5 (lower is better)
Translates to: TVHISQDCYCQTEPRSIQNWDSH*FQFQVF
Trigger: AAAAACTTGGAACTGGAACAAGTGACTGTCCCAATT...CTGGATGCTTCTGGGCTCCGTTTGGCAATAGCAGTCTTGGCTGATGTGCACAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CAA 90 bp AAGACTGCTATTGCCAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGTTGAGTAACAAGCCATaGCCACTTGCGATAGCCAAA +
Preference number: 5 (lower is better)
Translates to: KTAIAKRSPEASRYTFQQLSNKP*PLAIAK
Trigger: TTTGGCTATCGCAAGTGGCAATGGCTTGTTACTCAA...CTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTGGCAATAGCAGTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS GCA 90 bp TGTGGATGTGGTCAATGGCATCCTGAACGTTGTCCACTACTTCAATaGATAATTCCAGGTCCCCATACTCAGTTCGGAGTGACTTCACTT +
Preference number: 5 (lower is better)
Translates to: CGCGQWHPERCPLLQ*IIPGPHTQFGVTSL
Trigger: AAGTGAAGTCACTCCGAACTGAGTATGGGGACCTGGAATTATGCATTGAAGTAGTGGACAACGTTCAGGATGCCATTGACCACATCCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371221.3
ENST00000371224.7
ENST00000485428.1
CDS-3UTR CAA 90 bp AAGACTGCTATTGCCAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAGTCATGGAAATCCAAATaGGTCACCAAAATCTGGGCA +
Preference number: 5 (lower is better)
Translates to: KTAIAKRSPEASRYTFQQSWKSK*VTKIWA
Trigger: TGCCCAGATTTTGGTGACCAATTTGGATTTCCATGA...CTGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTGGCAATAGCAGTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CAA 90 bp CAAGACTGCTATTGCCAAACGGAGCCCAGAAGCATCCAGGTACACTTTCCAACAATCAGATCTATCATTTaGTCTAGGCGGCAAAGATCT +
Preference number: 5 (lower is better)
Translates to: QDCYCQTEPRSIQVHFPTIRSII*SRRQRS
Trigger: AGATCTTTGCCGCCTAGACAAAATGATAGATCTGAT...TGTTGGAAAGTGTACCTGGATGCTTCTGGGCTCCGTTTGGCAATAGCAGTCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS-3UTR CAA 90 bp AAGATAATTGGACTTGGCAAAGTCCCTATCGGTAGCAACTATTTTCTTACTTTATCTGGTATTCACCAGTaGCACGGCCTCCTTGACTCC +
Preference number: 5 (lower is better)
Translates to: KIIGLGKVPIGSNYFLTLSGIHQ*HGLLDS
Trigger: GGAGTCAAGGAGGCCGTGCAACTGGTGAATACCAGA...TAAAGTAAGAAAATAGTTGCTACCGATAGGGACTTTGCCAAGTCCAATTATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS CCA 90 bp ATATCAATGATCTGGTCAAATAATGGTGTCCTGAGCAGATCCCGGTaGATTAACAAAGTCTCCAAAGCATTACAGGCAGCTGGATATTCA +
Preference number: 5 (lower is better)
Translates to: ISMIWSNNGVLSRSR*INKVSKALQAAGYS
Trigger: TGAATATCCAGCTGCCTGTAATGCTTTGGAGACTTTGTTAATCCACCGGGATCTGCTCAGGACACCATTATTTGACCAGATCATTGATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371221.3
ENST00000371224.7
ENST00000485428.1
CDS TCA 72 bp CCGCTCCAGCGGCCCGGCGCTCACGCCCCTCGCGCTTaGGCCTGGGCGCGCAACAGCTTCCGCAGAGACGCG +
Preference number: 6 (lower is better)
Translates to: PLQRPGAHAPRA*AWARNSFRRDA
Trigger: CGCGTCTCTGCGGAAGCTGTTGCGCGCCCAGGCTCAAGCGCGAGGGGCGTGAGCGCCGGGCCGCTGGAGCGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483788.1
CDS GCA 72 bp GCGCAAAACACGTCCCACGCTGTCCTGGGAGGAGGCTaGGATCTGTCGCAGACCGATGGCCAGGCTGTTCAA +
Preference number: 6 (lower is better)
Translates to: AQNTSHAVLGGG*DLSQTDGQAVQ
Trigger: TTGAACAGCCTGGCCATCGGTCTGCGACAGATCGCAGCCTCCTCCCAGGACAGCGTGGGACGTGTTTTGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS CAA 90 bp TCCCCTCGGGTCACCACGGCACTGCCGAGCTTCACCACGATTCTCTaGGCATGCTTCAGCTCACTGCGGTGGGCGAAGGACTTGCCATGT +
Preference number: 6 (lower is better)
Translates to: SPRVTTALPSFTTIL*ACFSSLRWAKDLPC
Trigger: ACATGGCAAGTCCTTCGCCCACCGCAGTGAGCTGAAGCATGCCAAGAGAATCGTGGTGAAGCTCGGCAGTGCCGTGGTGACCCGAGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371221.3
ENST00000371224.7
ENST00000483788.1
CDS TCA 72 bp TGGTTCTGCCCCGAGTGGAGGGCCTGCCGCACGCTCTaGGACAGAAGGATCTCATGGCGCAAGCGTTGTTTG +
Preference number: 6 (lower is better)
Translates to: WFCPEWRACRTL*DRRISWRKRCL
Trigger: CAAACAACGCTTGCGCCATGAGATCCTTCTGTCTCAGAGCGTGCGGCAGGCCCTCCACTCGGGGCAGAACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371221.3
ENST00000371224.7
ENST00000483788.1
CDS CAA 72 bp GTCACCACGGCACTGCCGAGCTTCACCACGATTCTCTaGGCATGCTTCAGCTCACTGCGGTGGGCGAAGGAC +
Preference number: 6 (lower is better)
Translates to: VTTALPSFTTIL*ACFSSLRWAKD
Trigger: GTCCTTCGCCCACCGCAGTGAGCTGAAGCATGCCAAGAGAATCGTGGTGAAGCTCGGCAGTGCCGTGGTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371221.3
ENST00000371224.7
ENST00000483788.1
CDS GCA 72 bp CCAGGCCACATTCATCCCCTCGGGTCACCACGGCACTaGCGAGCTTCACCACGATTCTCTTGGCATGCTTCA +
Preference number: 6 (lower is better)
Translates to: PGHIHPLGSPRH*RASPRFSWHAS
Trigger: TGAAGCATGCCAAGAGAATCGTGGTGAAGCTCGGCAGTGCCGTGGTGACCCGAGGGGATGAATGTGGCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371221.3
ENST00000371224.7
ENST00000483788.1
CDS CCA 72 bp TCACCACGGCACTGCCGAGCTTCACCACGATTCTCTTaGCATGCTTCAGCTCACTGCGGTGGGCGAAGGACT +
Preference number: 6 (lower is better)
Translates to: SPRHCRASPRFS*HASAHCGGRRT
Trigger: AGTCCTTCGCCCACCGCAGTGAGCTGAAGCATGCCAAGAGAATCGTGGTGAAGCTCGGCAGTGCCGTGGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371221.3
ENST00000371224.7
ENST00000483788.1
CDS CAA 90 bp GGCCTGCCGCACGCTCTGAGACAGAAGGATCTCATGGCGCAAGCGTaGTTTGCCAAAGGCTACGGCTCCACTGGTCACCAGCATCATCTC +
Preference number: 6 (lower is better)
Translates to: GLPHALRQKDLMAQA*FAKGYGSTGHQHHL
Trigger: GAGATGATGCTGGTGACCAGTGGAGCCGTAGCCTTTGGCAAACAACGCTTGCGCCATGAGATCCTTCTGTCTCAGAGCGTGCGGCAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371221.3
ENST00000371224.7
ENST00000483788.1
CDS CCA 72 bp ACGGCCTCCTTGACTCCATGGATTGAGAGAGCCTCCTaGGTCAGGAGGTGGAGAATCCGGTTGCTGTGTGCA +
Preference number: 6 (lower is better)
Translates to: TASLTPWIERAS*VRRWRIRLLCA
Trigger: TGCACACAGCAACCGGATTCTCCACCTCCTGACCCAGGAGGCTCTCTCAATCCATGGAGTCAAGGAGGCCGT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371221.3
ENST00000371224.7
ENST00000485428.1
CDS TCA 72 bp GTCCTACTGGTCCCCGGGCGTGGATTCTCGATGTACTaGTTCCCACTTCAGCTCCCAGTCCAAAGCGGTAAC +
Preference number: 6 (lower is better)
Translates to: VLLVPGRGFSMY*FPLQLPVQSGN
Trigger: GTTACCGCTTTGGACTGGGAGCTGAAGTGGGAATCAGTACATCGAGAATCCACGCCCGGGGACCAGTAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS GCA 72 bp TCACTTGTTCCAGTTCCAAGTTTTTGGCGATTCGGGTaGGGCGCAAAACACGTCCCACGCTGTCCTGGGAGG +
Preference number: 6 (lower is better)
Translates to: SLVPVPSFWRFG*GAKHVPRCPGR
Trigger: CCTCCCAGGACAGCGTGGGACGTGTTTTGCGCCGCACCCGAATCGCCAAAAACTTGGAACTGGAACAAGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS CCA 72 bp ACCACGATTCTCTTGGCATGCTTCAGCTCACTGCGGTaGGCGAAGGACTTGCCATGTGTACGACTGAGGGGT +
Preference number: 6 (lower is better)
Translates to: TTILLACFSSLR*AKDLPCVRLRG
Trigger: ACCCCTCAGTCGTACACATGGCAAGTCCTTCGCCCACCGCAGTGAGCTGAAGCATGCCAAGAGAATCGTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371221.3
ENST00000371224.7
ENST00000483788.1
CDS CCA 72 bp TGTCCTGGGAGGAGGCTGCGATCTGTCGCAGACCGATaGCCAGGCTGTTCAATTTGGATGTGGAGAGGCTTA +
Preference number: 6 (lower is better)
Translates to: CPGRRLRSVADR*PGCSIWMWRGL
Trigger: TAAGCCTCTCCACATCCAAATTGAACAGCCTGGCCATCGGTCTGCGACAGATCGCAGCCTCCTCCCAGGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS CCA 72 bp CTGGTATTCACCAGTTGCACGGCCTCCTTGACTCCATaGATTGAGAGAGCCTCCTGGGTCAGGAGGTGGAGA +
Preference number: 6 (lower is better)
Translates to: LVFTSCTASLTP*IERASWVRRWR
Trigger: TCTCCACCTCCTGACCCAGGAGGCTCTCTCAATCCATGGAGTCAAGGAGGCCGTGCAACTGGTGAATACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371221.3
ENST00000371224.7
ENST00000485428.1
CDS CCA 72 bp GTAAGCAGTCCCTCAAGTCCTACTGGTCCCCGGGCGTaGATTCTCGATGTACTGATTCCCACTTCAGCTCCC +
Preference number: 6 (lower is better)
Translates to: VSSPSSPTGPRA*ILDVLIPTSAP
Trigger: GGGAGCTGAAGTGGGAATCAGTACATCGAGAATCCACGCCCGGGGACCAGTAGGACTTGAGGGACTGCTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS CAA 72 bp CACGCTCTGAGACAGAAGGATCTCATGGCGCAAGCGTaGTTTGCCAAAGGCTACGGCTCCACTGGTCACCAG +
Preference number: 6 (lower is better)
Translates to: HALRQKDLMAQA*FAKGYGSTGHQ
Trigger: CTGGTGACCAGTGGAGCCGTAGCCTTTGGCAAACAACGCTTGCGCCATGAGATCCTTCTGTCTCAGAGCGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371221.3
ENST00000371224.7
ENST00000483788.1
CDS GCA 72 bp GCCAACATCCTTCCTCCAGATCGCGCCATTTCTCCCTaGTGCTCAACAGTAGGGCCTGCAGGCTTTACTTCT +
Preference number: 6 (lower is better)
Translates to: ANILPPDRAISP*CSTVGPAGFTS
Trigger: AGAAGTAAAGCCTGCAGGCCCTACTGTTGAGCAGCAGGGAGAAATGGCGCGATCTGGAGGAAGGATGTTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371221.3
ENST00000371224.7
ENST00000489386.1
CDS CAA 90 bp CACCTTTGGGTGGGTTCCATTGGCAATAACAACAGAAGTGCCACCTaGCAAAGCCCAGAGGGCTGCTTTCACCTTGGCTTCCATGCCACC +
Preference number: 6 (lower is better)
Translates to: HLWVGSIGNNNRSAT*QSPEGCFHLGFHAT
Trigger: GGTGGCATGGAAGCCAAGGTGAAAGCAGCCCTCTGGGCTTTGCAAGGTGGCACTTCTGTTGTTATTGCCAATGGAACCCACCCAAAGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371221.3
ENST00000371224.7
ENST00000489386.1
CDS CAA 90 bp GAGGAGGCTGCGATCTGTCGCAGACCGATGGCCAGGCTGTTCAATTaGGATGTGGAGAGGCTTAAACGTTTCAGCAGAGGAGCTGCAAGT +
Preference number: 6 (lower is better)
Translates to: EEAAICRRPMARLFN*DVERLKRFSRGAAS
Trigger: ACTTGCAGCTCCTCTGCTGAAACGTTTAAGCCTCTCCACATCCAAATTGAACAGCCTGGCCATCGGTCTGCGACAGATCGCAGCCTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS CAA 90 bp AGCAGAACTCCAATTGGGACAGTCACTTGTTCCAGTTCCAAGTTTTaGGCGATTCGGGTGCGGCGCAAAACACGTCCCACGCTGTCCTGG +
Preference number: 6 (lower is better)
Translates to: SRTPIGTVTCSSSKF*AIRVRRKTRPTLSW
Trigger: CCAGGACAGCGTGGGACGTGTTTTGCGCCGCACCCGAATCGCCAAAAACTTGGAACTGGAACAAGTGACTGTCCCAATTGGAGTTCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS GCA 72 bp TCTGAGACAGAAGGATCTCATGGCGCAAGCGTTGTTTaGCAAAGGCTACGGCTCCACTGGTCACCAGCATCA +
Preference number: 6 (lower is better)
Translates to: SETEGSHGASVV*QRLRLHWSPAS
Trigger: TGATGCTGGTGACCAGTGGAGCCGTAGCCTTTGGCAAACAACGCTTGCGCCATGAGATCCTTCTGTCTCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371221.3
ENST00000371224.7
ENST00000483788.1
CDS GCA 72 bp CTGGCATTCCAGAACACACAGGCACTGTCTACGTGCTaGAGGAAGAACTCCGCTGTGTTTTCGTCCTCTGTG +
Preference number: 6 (lower is better)
Translates to: LAFQNTQALSTC*RKNSAVFSSSV
Trigger: CACAGAGGACGAAAACACAGCGGAGTTCTTCCTGCAGCACGTAGACAGTGCCTGTGTGTTCTGGAATGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS GCA 72 bp GTGCTGGCATTCCAGAACACACAGGCACTGTCTACGTaGTGCAGGAAGAACTCCGCTGTGTTTTCGTCCTCT +
Preference number: 6 (lower is better)
Translates to: VLAFQNTQALST*CRKNSAVFSSS
Trigger: AGAGGACGAAAACACAGCGGAGTTCTTCCTGCAGCACGTAGACAGTGCCTGTGTGTTCTGGAATGCCAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS CCA 72 bp CAATTGGGACAGTCACTTGTTCCAGTTCCAAGTTTTTaGCGATTCGGGTGCGGCGCAAAACACGTCCCACGC +
Preference number: 6 (lower is better)
Translates to: QLGQSLVPVPSF*RFGCGAKHVPR
Trigger: GCGTGGGACGTGTTTTGCGCCGCACCCGAATCGCCAAAAACTTGGAACTGGAACAAGTGACTGTCCCAATTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS CAA 72 bp TTGGCATGCTTCAGCTCACTGCGGTGGGCGAAGGACTaGCCATGTGTACGACTGAGGGGTACAGTGATAAAC +
Preference number: 6 (lower is better)
Translates to: LACFSSLRWAKD*PCVRLRGTVIN
Trigger: GTTTATCACTGTACCCCTCAGTCGTACACATGGCAAGTCCTTCGCCCACCGCAGTGAGCTGAAGCATGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371221.3
ENST00000371224.7
ENST00000483788.1
CDS CAA 72 bp CCAATTGGGACAGTCACTTGTTCCAGTTCCAAGTTTTaGGCGATTCGGGTGCGGCGCAAAACACGTCCCACG +
Preference number: 6 (lower is better)
Translates to: PIGTVTCSSSKF*AIRVRRKTRPT
Trigger: CGTGGGACGTGTTTTGCGCCGCACCCGAATCGCCAAAAACTTGGAACTGGAACAAGTGACTGTCCCAATTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS CAA 72 bp ACTTCTTCTCTGGTATTCACCAGTTGCACGGCCTCCTaGACTCCATGGATTGAGAGAGCCTCCTGGGTCAGG +
Preference number: 6 (lower is better)
Translates to: TSSLVFTSCTAS*TPWIERASWVR
Trigger: CCTGACCCAGGAGGCTCTCTCAATCCATGGAGTCAAGGAGGCCGTGCAACTGGTGAATACCAGAGAAGAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371221.3
ENST00000371224.7
ENST00000485428.1
CDS CAA 90 bp ACGATTCTCTTGGCATGCTTCAGCTCACTGCGGTGGGCGAAGGACTaGCCATGTGTACGACTGAGGGGTACAGTGATAAACGGGATGTTG +
Preference number: 6 (lower is better)
Translates to: TILLACFSSLRWAKD*PCVRLRGTVINGML
Trigger: CAACATCCCGTTTATCACTGTACCCCTCAGTCGTACACATGGCAAGTCCTTCGCCCACCGCAGTGAGCTGAAGCATGCCAAGAGAATCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371221.3
ENST00000371224.7
ENST00000483788.1
CDS TCA 72 bp CATACTCAGTTCGGAGTGACTTCACTTCGGAGGGGCTaGAGGTCAGATAGGAGGCAAATTTGGGGCCTGCAT +
Preference number: 6 (lower is better)
Translates to: HTQFGVTSLRRG*RSDRRQIWGLH
Trigger: ATGCAGGCCCCAAATTTGCCTCCTATCTGACCTTCAGCCCCTCCGAAGTGAAGTCACTCCGAACTGAGTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371221.3
ENST00000371224.7
ENST00000485428.1
CDS GCA 72 bp AACATCCTTCCTCCAGATCGCGCCATTTCTCCCTGCTaGTCAACAGTAGGGCCTGCAGGCTTTACTTCTGAA +
Preference number: 6 (lower is better)
Translates to: NILPPDRAISPC*STVGPAGFTSE
Trigger: TTCAGAAGTAAAGCCTGCAGGCCCTACTGTTGAGCAGCAGGGAGAAATGGCGCGATCTGGAGGAAGGATGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371221.3
ENST00000371224.7
ENST00000489386.1
CDS GCA 72 bp CTCCCAGTCCAAAGCGGTAACCATCAGAAAAGCGAGTaGTGGCATTCCAGAACACACAGGCACTGTCTACGT +
Preference number: 6 (lower is better)
Translates to: LPVQSGNHQKSE*WHSRTHRHCLR
Trigger: ACGTAGACAGTGCCTGTGTGTTCTGGAATGCCAGCACTCGCTTTTCTGATGGTTACCGCTTTGGACTGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS GCA 72 bp AAGCCATTGCCACTTGCGATAGCCAAAGCTGCCACCTaGAGATCAAAGGGAGAGCAGTGGATCAAAGGAGAC +
Preference number: 6 (lower is better)
Translates to: KPLPLAIAKAAT*RSKGEQWIKGD
Trigger: GTCTCCTTTGATCCACTGCTCTCCCTTTGATCTGCAGGTGGCAGCTTTGGCTATCGCAAGTGGCAATGGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485428.1
CDS CCA 72 bp CCCACAGCGGTAAACTTGACTCAACATGCTGCGATGTaGTCACTAACCAAAGTATCTTCCTCACCACCGCCG +
Preference number: 6 (lower is better)
Translates to: PTAVNLTQHAAM*SLTKVSSSPPP
Trigger: CGGCGGTGGTGAGGAAGATACTTTGGTTAGTGACCACATCGCAGCATGTTGAGTCAAGTTTACCGCTGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS CCA 72 bp GTCGCAGACCGATGGCCAGGCTGTTCAATTTGGATGTaGAGAGGCTTAAACGTTTCAGCAGAGGAGCTGCAA +
Preference number: 6 (lower is better)
Translates to: VADRWPGCSIWM*RGLNVSAEELQ
Trigger: TTGCAGCTCCTCTGCTGAAACGTTTAAGCCTCTCCACATCCAAATTGAACAGCCTGGCCATCGGTCTGCGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS CCA 72 bp CGATCTGTCGCAGACCGATGGCCAGGCTGTTCAATTTaGATGTGGAGAGGCTTAAACGTTTCAGCAGAGGAG +
Preference number: 6 (lower is better)
Translates to: RSVADRWPGCSI*MWRGLNVSAEE
Trigger: CTCCTCTGCTGAAACGTTTAAGCCTCTCCACATCCAAATTGAACAGCCTGGCCATCGGTCTGCGACAGATCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS CCA 72 bp GCTGTGTTTTCGTCCTCTGTGACGATGACATCCGTGTaGGAGCTGCCATACTTGTGGATGTGGTCAATGGCA +
Preference number: 6 (lower is better)
Translates to: AVFSSSVTMTSV*ELPYLWMWSMA
Trigger: TGCCATTGACCACATCCACAAGTATGGCAGCTCCCACACGGATGTCATCGTCACAGAGGACGAAAACACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS CCA 72 bp CCCACAGCGGTAAACTTGACTCAACATGCTGCGATGTaGTCACTAACCAAAGTATCCATGGGCCAGATCCCC +
Preference number: 6 (lower is better)
Translates to: PTAVNLTQHAAM*SLTKVSMGQIP
Trigger: GGGGATCTGGCCCATGGATACTTTGGTTAGTGACCACATCGCAGCATGTTGAGTCAAGTTTACCGCTGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483788.1
CDS CAA 72 bp GAAGACGGTTGTACACTTGACCCAGGGCAGAAGATGTaGGTTGAAGGGCTGGAACCCACAGCGGTAAACTTG +
Preference number: 6 (lower is better)
Translates to: EDGCTLDPGQKM*VEGLEPTAVNL
Trigger: CAAGTTTACCGCTGTGGGTTCCAGCCCTTCAACCAACATCTTCTGCCCTGGGTCAAGTGTACAACCGTCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371221.3
ENST00000371224.7
ENST00000483788.1
CDS CAA 72 bp GTGGGTTCCATTGGCAATAACAACAGAAGTGCCACCTaGCAAAGCCCAGAGGGCTGCTTTCACCTTGGCTTC +
Preference number: 6 (lower is better)
Translates to: VGSIGNNNRSAT*QSPEGCFHLGF
Trigger: GAAGCCAAGGTGAAAGCAGCCCTCTGGGCTTTGCAAGGTGGCACTTCTGTTGTTATTGCCAATGGAACCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371221.3
ENST00000371224.7
ENST00000489386.1
CDS CAA 72 bp GCGATCTGTCGCAGACCGATGGCCAGGCTGTTCAATTaGGATGTGGAGAGGCTTAAACGTTTCAGCAGAGGA +
Preference number: 6 (lower is better)
Translates to: AICRRPMARLFN*DVERLKRFSRG
Trigger: TCCTCTGCTGAAACGTTTAAGCCTCTCCACATCCAAATTGAACAGCCTGGCCATCGGTCTGCGACAGATCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS CAA 90 bp ACAATGTCTGTGATGACGTGCCCAGACACCTTTGGGTGGGTTCCATaGGCAATAACAACAGAAGTGCCACCTTGCAAAGCCCAGAGGGCT +
Preference number: 6 (lower is better)
Translates to: TMSVMTCPDTFGWVP*AITTEVPPCKAQRA
Trigger: AGCCCTCTGGGCTTTGCAAGGTGGCACTTCTGTTGTTATTGCCAATGGAACCCACCCAAAGGTGTCTGGGCACGTCATCACAGACATTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371221.3
ENST00000371224.7
ENST00000489386.1
CDS TCA 72 bp ACCTTATCAACACTGGCCTCGGAATCCACATACATGTaGCAGATCCCTTCGCTGTGCCCCATCACTGGAATC +
Preference number: 6 (lower is better)
Translates to: TLSTLASESTYM*QIPSLCPITGI
Trigger: GATTCCAGTGATGGGGCACAGCGAAGGGATCTGTCACATGTATGTGGATTCCGAGGCCAGTGTTGATAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371221.3
ENST00000371224.7
ENST00000485428.1
CDS GCA 72 bp CCAACTTTCTTCCCCTCCACAATGTCTGTGATGACGTaGCCAGACACCTTTGGGTGGGTTCCATTGGCAATA +
Preference number: 6 (lower is better)
Translates to: PTFFPSTMSVMT*PDTFGWVPLAI
Trigger: TATTGCCAATGGAACCCACCCAAAGGTGTCTGGGCACGTCATCACAGACATTGTGGAGGGGAAGAAAGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371221.3
ENST00000371224.7
ENST00000489386.1
CDS GCA 72 bp GCTGGAACCCACAGCGGTAAACTTGACTCAACATGCTaGGATGTGGTCACTAACCAAAGTATCCATGGGCCA +
Preference number: 6 (lower is better)
Translates to: AGTHSGKLDSTC*DVVTNQSIHGP
Trigger: TGGCCCATGGATACTTTGGTTAGTGACCACATCGCAGCATGTTGAGTCAAGTTTACCGCTGTGGGTTCCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483788.1
CDS GCA 72 bp AGGGCTGGAACCCACAGCGGTAAACTTGACTCAACATaGTGCGATGTGGTCACTAACCAAAGTATCCATGGG +
Preference number: 6 (lower is better)
Translates to: RAGTHSGKLDST*CDVVTNQSIHG
Trigger: CCCATGGATACTTTGGTTAGTGACCACATCGCAGCATGTTGAGTCAAGTTTACCGCTGTGGGTTCCAGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483788.1
CDS CCA 72 bp CTCCACAATGTCTGTGATGACGTGCCCAGACACCTTTaGGTGGGTTCCATTGGCAATAACAACAGAAGTGCC +
Preference number: 6 (lower is better)
Translates to: LHNVCDDVPRHL*VGSIGNNNRSA
Trigger: GGCACTTCTGTTGTTATTGCCAATGGAACCCACCCAAAGGTGTCTGGGCACGTCATCACAGACATTGTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371221.3
ENST00000371224.7
ENST00000489386.1
CDS CAA 90 bp GGGCAGAAGATGTTGGTTGAAGGGCTGGAACCCACAGCGGTAAACTaGACTCAACATGCTGCGATGTGGTCACTAACCAAAGTATCTTCC +
Preference number: 6 (lower is better)
Translates to: GQKMLVEGLEPTAVN*TQHAAMWSLTKVSS
Trigger: GGAAGATACTTTGGTTAGTGACCACATCGCAGCATGTTGAGTCAAGTTTACCGCTGTGGGTTCCAGCCCTTCAACCAACATCTTCTGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS CAA 90 bp GGGCAGAAGATGTTGGTTGAAGGGCTGGAACCCACAGCGGTAAACTaGACTCAACATGCTGCGATGTGGTCACTAACCAAAGTATCCATG +
Preference number: 6 (lower is better)
Translates to: GQKMLVEGLEPTAVN*TQHAAMWSLTKVSM
Trigger: CATGGATACTTTGGTTAGTGACCACATCGCAGCATGTTGAGTCAAGTTTACCGCTGTGGGTTCCAGCCCTTCAACCAACATCTTCTGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483788.1
CDS GCA 72 bp GCTGGAACCCACAGCGGTAAACTTGACTCAACATGCTaGGATGTGGTCACTAACCAAAGTATCTTCCTCACC +
Preference number: 6 (lower is better)
Translates to: AGTHSGKLDSTC*DVVTNQSIFLT
Trigger: GGTGAGGAAGATACTTTGGTTAGTGACCACATCGCAGCATGTTGAGTCAAGTTTACCGCTGTGGGTTCCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS GCA 72 bp AGGGCTGGAACCCACAGCGGTAAACTTGACTCAACATaGTGCGATGTGGTCACTAACCAAAGTATCTTCCTC +
Preference number: 6 (lower is better)
Translates to: RAGTHSGKLDST*CDVVTNQSIFL
Trigger: GAGGAAGATACTTTGGTTAGTGACCACATCGCAGCATGTTGAGTCAAGTTTACCGCTGTGGGTTCCAGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS CCA 72 bp TTGGTCACCAAAATCTGGGCAGCACAGATGCTGTACTaGGTAAACATAGCCTCATACAAGGCCATCAGCCCA +
Preference number: 6 (lower is better)
Translates to: LVTKIWAAQMLY*VNIASYKAISP
Trigger: TGGGCTGATGGCCTTGTATGAGGCTATGTTTACCCAGTACAGCATCTGTGCTGCCCAGATTTTGGTGACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS CCA 72 bp GGTTCCGGCGCTTCTGCTCATCATGGAAATCCAAATTaGTCACCAAAATCTGGGCAGCACAGATGCTGTACT +
Preference number: 6 (lower is better)
Translates to: GSGASAHHGNPN*SPKSGQHRCCT
Trigger: AGTACAGCATCTGTGCTGCCCAGATTTTGGTGACCAATTTGGATTTCCATGATGAGCAGAAGCGCCGGAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS CCA 72 bp ACAATGTCTGTGATGACGTGCCCAGACACCTTTGGGTaGGTTCCATTGGCAATAACAACAGAAGTGCCACCT +
Preference number: 6 (lower is better)
Translates to: TMSVMTCPDTFG*VPLAITTEVPP
Trigger: AGGTGGCACTTCTGTTGTTATTGCCAATGGAACCCACCCAAAGGTGTCTGGGCACGTCATCACAGACATTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371221.3
ENST00000371224.7
ENST00000489386.1
CDS CCA 72 bp CCGTGTGGGAGCTGCCATACTTGTGGATGTGGTCAATaGCATCCTGAACGTTGTCCACTACTTCAATGCATA +
Preference number: 6 (lower is better)
Translates to: PCGSCHTCGCGQ*HPERCPLLQCI
Trigger: TATGCATTGAAGTAGTGGACAACGTTCAGGATGCCATTGACCACATCCACAAGTATGGCAGCTCCCACACGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371221.3
ENST00000371224.7
ENST00000485428.1
CDS CAA 72 bp AGGTTCCGGCGCTTCTGCTCATCATGGAAATCCAAATaGGTCACCAAAATCTGGGCAGCACAGATGCTGTAC +
Preference number: 6 (lower is better)
Translates to: RFRRFCSSWKSK*VTKIWAAQMLY
Trigger: GTACAGCATCTGTGCTGCCCAGATTTTGGTGACCAATTTGGATTTCCATGATGAGCAGAAGCGCCGGAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS CAA 90 bp ATGAGATCTGAAGACGGTTGTACACTTGACCCAGGGCAGAAGATGTaGGTTGAAGGGCTGGAACCCACAGCGGTAAACTTGACTCAACAT +
Preference number: 6 (lower is better)
Translates to: MRSEDGCTLDPGQKM*VEGLEPTAVNLTQH
Trigger: ATGTTGAGTCAAGTTTACCGCTGTGGGTTCCAGCCCTTCAACCAACATCTTCTGCCCTGGGTCAAGTGTACAACCGTCTTCAGATCTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371221.3
ENST00000371224.7
ENST00000483788.1
CDS CAA 90 bp ACGAGATTCAAAGATCACCAGCAGAACTCCAATTGGGACAGTCACTaGTTCCAGTTCCAAGTTTTTGGCGATTCGGGTGCGGCGCAAAAC +
Preference number: 6 (lower is better)
Translates to: TRFKDHQQNSNWDSH*FQFQVFGDSGAAQN
Trigger: GTTTTGCGCCGCACCCGAATCGCCAAAAACTTGGAACTGGAACAAGTGACTGTCCCAATTGGAGTTCTGCTGGTGATCTTTGAATCTCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS TCA 72 bp ATCTCATCACGCTGGTCCGTCAACAGATCAGCCAGATaGTGGATAATTTCTGCTCTCTGCTCAGGTTCCAAG +
Preference number: 6 (lower is better)
Translates to: ISSRWSVNRSAR*WIISALCSGSK
Trigger: CTTGGAACCTGAGCAGAGAGCAGAAATTATCCATCATCTGGCTGATCTGTTGACGGACCAGCGTGATGAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS GCA 72 bp GGTCAATGGCATCCTGAACGTTGTCCACTACTTCAATaGATAATTCCAGGTCCCCATACTCAGTTCGGAGTG +
Preference number: 6 (lower is better)
Translates to: GQWHPERCPLLQ*IIPGPHTQFGV
Trigger: CACTCCGAACTGAGTATGGGGACCTGGAATTATGCATTGAAGTAGTGGACAACGTTCAGGATGCCATTGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371221.3
ENST00000371224.7
ENST00000485428.1
CDS CCA 72 bp AGTGTTCCATTGAGGTTCCGGCGCTTCTGCTCATCATaGAAATCCAAATTGGTCACCAAAATCTGGGCAGCA +
Preference number: 6 (lower is better)
Translates to: SVPLRFRRFCSS*KSKLVTKIWAA
Trigger: TGCTGCCCAGATTTTGGTGACCAATTTGGATTTCCATGATGAGCAGAAGCGCCGGAACCTCAATGGAACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS CCA 72 bp TTTAAACTTCCATGCTCTGAGAAATCTGAGACCACGTaGTCCTTCCCTCGCAGCAGCCACTTAGTAGTAAGC +
Preference number: 6 (lower is better)
Translates to: FKLPCSEKSETT*SFPRSSHLVVS
Trigger: GCTTACTACTAAGTGGCTGCTGCGAGGGAAGGACCACGTGGTCTCAGATTTCTCAGAGCATGGAAGTTTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS CAA 72 bp ATGTTGGTTGAAGGGCTGGAACCCACAGCGGTAAACTaGACTCAACATGCTGCGATGTGGTCACTAACCAAA +
Preference number: 6 (lower is better)
Translates to: MLVEGLEPTAVN*TQHAAMWSLTK
Trigger: TTTGGTTAGTGACCACATCGCAGCATGTTGAGTCAAGTTTACCGCTGTGGGTTCCAGCCCTTCAACCAACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371221.3
ENST00000371224.7
ENST00000483788.1
CDS CAA 72 bp TGTGTACGACTGAGGGGTACAGTGATAAACGGGATGTaGCTCCAAGAACGAACATGTCTGATGACTGAAGGC +
Preference number: 6 (lower is better)
Translates to: CVRLRGTVINGM*LQERTCLMTEG
Trigger: GCCTTCAGTCATCAGACATGTTCGTTCTTGGAGCAACATCCCGTTTATCACTGTACCCCTCAGTCGTACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371221.3
ENST00000371224.7
ENST00000483788.1
CDS CAA 72 bp AAAGATCACCAGCAGAACTCCAATTGGGACAGTCACTaGTTCCAGTTCCAAGTTTTTGGCGATTCGGGTGCG +
Preference number: 6 (lower is better)
Translates to: KDHQQNSNWDSH*FQFQVFGDSGA
Trigger: CGCACCCGAATCGCCAAAAACTTGGAACTGGAACAAGTGACTGTCCCAATTGGAGTTCTGCTGGTGATCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS CAA 90 bp GACTTGCCATGTGTACGACTGAGGGGTACAGTGATAAACGGGATGTaGCTCCAAGAACGAACATGTCTGATGACTGAAGGCTGGATACAA +
Preference number: 6 (lower is better)
Translates to: DLPCVRLRGTVINGM*LQERTCLMTEGWIQ
Trigger: TTGTATCCAGCCTTCAGTCATCAGACATGTTCGTTCTTGGAGCAACATCCCGTTTATCACTGTACCCCTCAGTCGTACACATGGCAAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371221.3
ENST00000371224.7
ENST00000483788.1
CDS CAA 90 bp CTGACCAGCTGGGAAGAGCCACGTGGAATGATCAGATCTATCATTTaGTCTAGGCGGCAAAGATCTTCAACTTCTTCTCTGGTATTCACC +
Preference number: 6 (lower is better)
Translates to: LTSWEEPRGMIRSII*SRRQRSSTSSLVFT
Trigger: GGTGAATACCAGAGAAGAAGTTGAAGATCTTTGCCGCCTAGACAAAATGATAGATCTGATCATTCCACGTGGCTCTTCCCAGCTGGTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371221.3
ENST00000371224.7
ENST00000485428.1
CDS TCA 72 bp GAGCTGCCATACTTGTGGATGTGGTCAATGGCATCCTaGACGTTGTCCACTACTTCAATGCATAATTCCAGG +
Preference number: 6 (lower is better)
Translates to: ELPYLWMWSMAS*TLSTTSMHNSR
Trigger: CCTGGAATTATGCATTGAAGTAGTGGACAACGTTCAGGATGCCATTGACCACATCCACAAGTATGGCAGCTC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371221.3
ENST00000371224.7
ENST00000485428.1
CDS TCA 72 bp TTGACAATGGGGACAATGTTCATTCTAAGGAGTTCATaGAGTGTTCCATTGAGGTTCCGGCGCTTCTGCTCA +
Preference number: 6 (lower is better)
Translates to: LTMGTMFILRSS*SVPLRFRRFCS
Trigger: TGAGCAGAAGCGCCGGAACCTCAATGGAACACTTCATGAACTCCTTAGAATGAACATTGTCCCCATTGTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS CCA 72 bp ATCTGGTCAAATAATGGTGTCCTGAGCAGATCCCGGTaGATTAACAAAGTCTCCAAAGCATTACAGGCAGCT +
Preference number: 6 (lower is better)
Translates to: IWSNNGVLSRSR*INKVSKALQAA
Trigger: AGCTGCCTGTAATGCTTTGGAGACTTTGTTAATCCACCGGGATCTGCTCAGGACACCATTATTTGACCAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371221.3
ENST00000371224.7
ENST00000485428.1
CDS CAA 72 bp CAGGACGAGATTCAAAGATCACCAGCAGAACTCCAATaGGGACAGTCACTTGTTCCAGTTCCAAGTTTTTGG +
Preference number: 6 (lower is better)
Translates to: QDEIQRSPAELQ*GQSLVPVPSFW
Trigger: CCAAAAACTTGGAACTGGAACAAGTGACTGTCCCAATTGGAGTTCTGCTGGTGATCTTTGAATCTCGTCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371221.3
ENST00000371224.7
CDS CAA 72 bp TGGGAAGAGCCACGTGGAATGATCAGATCTATCATTTaGTCTAGGCGGCAAAGATCTTCAACTTCTTCTCTG +
Preference number: 6 (lower is better)
Translates to: WEEPRGMIRSII*SRRQRSSTSSL
Trigger: CAGAGAAGAAGTTGAAGATCTTTGCCGCCTAGACAAAATGATAGATCTGATCATTCCACGTGGCTCTTCCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371221.3
ENST00000371224.7
ENST00000485428.1
CDS CAA 72 bp GCCCATATTCCTGGCAAGGTGTCCTTAATTCTGCCATaGCTACTTATGATGCTGTGCTTTAAGGACAGAACT +
Preference number: 6 (lower is better)
Translates to: AHIPGKVSLILP*LLMMLCFKDRT
Trigger: AGTTCTGTCCTTAAAGCACAGCATCATAAGTAGCAATGGCAGAATTAAGGACACCTTGCCAGGAATATGGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489386.1
CDS CAA 90 bp ATTAGCCCTGCCCATATTCCTGGCAAGGTGTCCTTAATTCTGCCATaGCTACTTATGATGCTGTGCTTTAAGGACAGAACTGAAAAAGAA +
Preference number: 6 (lower is better)
Translates to: ISPAHIPGKVSLILP*LLMMLCFKDRTEKE
Trigger: TTCTTTTTCAGTTCTGTCCTTAAAGCACAGCATCATAAGTAGCAATGGCAGAATTAAGGACACCTTGCCAGGAATATGGGCAGGGCTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489386.1