RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ALB (Homo sapiens)

Ensembl gene IDs: ENSG00000163631

Ensembl transcript IDs: ENST00000295897.9, ENST00000401494.7, ENST00000415165.6, ENST00000441319.5, ENST00000476441.6, ENST00000484992.1, ENST00000486939.1, ENST00000495173.1, ENST00000503124.5, ENST00000505649.5, ENST00000507673.1, ENST00000508932.5, ENST00000509063.5, ENST00000510166.5, ENST00000511370.1, ENST00000514786.1, ENST00000515133.5, ENST00000621085.4, ENST00000621628.4

Found 286 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TTGGCAAGGTCCGCCCTGTCATCAGCACATTCAAGCAGATCTCCATaGCAGCATTCCGTGTGGACTTTGGTAAGATCTGTCACTAACTTG +
Preference number: 1 (lower is better)
Translates to: LARSALSSAHSSRSP*QHSVWTLVRSVTNL
Trigger: CAAGTTAGTGACAGATCTTACCAAAGTCCACACGGAATGCTGCCATGGAGATCTGCTTGAATGTGCTGATGACAGGGCGGACCTTGCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476441.6
3UTR GCA 90 bp GCAGGTCTCCTTATCGTCAGCCTTGCAGCACTTCTCTACAAAAGCTaGGAAATCATCCATAACAGCTTTCAGTTGCTCTTTTGTTGCCTT +
Preference number: 1 (lower is better)
Translates to: AGLLIVSLAALLYKS*EIIHNSFQLLFCCL
Trigger: AAGGCAACAAAAGAGCAACTGAAAGCTGTTATGGATGATTTCGCAGCTTTTGTAGAGAAGTGCTGCAAGGCTGACGATAAGGAGACCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476441.6
3UTR CCA 90 bp CTGTCATCAGCACATTCAAGCAGATCTCCATGGCAGCATTCCGTGTaGACTTTGGTAAGATCTGTCACTAACTTGGAAACTTCTGCAAAC +
Preference number: 1 (lower is better)
Translates to: LSSAHSSRSPWQHSV*TLVRSVTNLETSAN
Trigger: GTTTGCAGAAGTTTCCAAGTTAGTGACAGATCTTACCAAAGTCCACACGGAATGCTGCCATGGAGATCTGCTTGAATGTGCTGATGACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476441.6
3UTR TCA 90 bp AGCATTAAACTCTTTGGGAACGTATGTTTCATCGACTTCCAGAGCTaGAAAGCATGGTCGCCTGTTCACCAAGGATTCTGTGCAGCATTT +
Preference number: 1 (lower is better)
Translates to: SIKLFGNVCFIDFQS*KAWSPVHQGFCAAF
Trigger: AAATGCTGCACAGAATCCTTGGTGAACAGGCGACCATGCTTTTCAGCTCTGGAAGTCGATGAAACATACGTTCCCAAAGAGTTTAATGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476441.6
3UTR GCA 90 bp CTGCACAGGGCATTCTTTTTGCTTCAGGATGTTTACAACATTTGCTaGCCACTTTTCCTAGGTTTCTTGAGACCTCTACAAGAGTTGGAG +
Preference number: 1 (lower is better)
Translates to: LHRAFFLLQDVYNIC*PLFLGFLRPLQELE
Trigger: CTCCAACTCTTGTAGAGGTCTCAAGAAACCTAGGAAAAGTGGGCAGCAAATGTTGTAAACATCCTGAAGCAAAAAGAATGCCCTGTGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476441.6
3UTR GCA 90 bp CACTTCTCTACAAAAGCTGCGAAATCATCCATAACAGCTTTCAGTTaGTCTTTTGTTGCCTTGGGCTTGTGTTTCACGAGCTCAACAAGT +
Preference number: 1 (lower is better)
Translates to: HFSTKAAKSSITAFS*SFVALGLCFTSSTS
Trigger: ACTTGTTGAGCTCGTGAAACACAAGCCCAAGGCAACAAAAGAGCAACTGAAAGCTGTTATGGATGATTTCGCAGCTTTTGTAGAGAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476441.6
3UTR GCA 90 bp AAAAGCTGCGAAATCATCCATAACAGCTTTCAGTTGCTCTTTTGTTaGCTTGGGCTTGTGTTTCACGAGCTCAACAAGTGCAGTTTGTTT +
Preference number: 1 (lower is better)
Translates to: KSCEIIHNSFQLLFC*LGLVFHELNKCSLF
Trigger: AAACAAACTGCACTTGTTGAGCTCGTGAAACACAAGCCCAAGGCAACAAAAGAGCAACTGAAAGCTGTTATGGATGATTTCGCAGCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476441.6
3UTR CCA 90 bp TTCTTGATTTGTCTCTCCTTCTCAGAAAGTGTGCATATATCTGCATaGAAGGTGAATGTTTCAGCATTAAACTCTTTGGGAACGTATGTT +
Preference number: 1 (lower is better)
Translates to: FLICLSFSESVHISA*KVNVSALNSLGTYV
Trigger: AACATACGTTCCCAAAGAGTTTAATGCTGAAACATTCACCTTCCATGCAGATATATGCACACTTTCTGAGAAGGAGAGACAAATCAAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476441.6
3UTR CCA 90 bp ATTTATTTAATTAGCCCACAAGAAACTAGAAATCCTCTACCGAAGTaGAATAAGAGAGAACACTGGAACTTCCACAGAACCTACAGAATT +
Preference number: 1 (lower is better)
Translates to: IYLISPQETRNPLPK*NKREHWNFHRTYRI
Trigger: AATTCTGTAGGTTCTGTGGAAGTTCCAGTGTTCTCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTTCTTGTGGGCTAATTAAATAAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
3UTR-3UTR TCA 90 bp TTTTACCCTCCTCGGCAAAGCAGGTCTCCTTATCGTCAGCCTTGCAGCACTTCTCTGTGCAGCATTTGGTaGCTCTGTCACTTACTGGCG +
Preference number: 2 (lower is better)
Translates to: FYPPRQSRSPYRQPCSTSLCSIW*LCHLLA
Trigger: CGCCAGTAAGTGACAGAGTCACCAAATGCTGCACAG...AGAAGTGCTGCAAGGCTGACGATAAGGAGACCTGCTTTGCCGAGGAGGGTAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476441.6
3UTR-3UTR CCA 90 bp TCATCAGCACATTCAAGCAGATCTCCATGGCAGCATTCCGTGTGGACTTTGGTACTGCAAACTCAGCTTTaGGAAATCTCTGGCTCAGGC +
Preference number: 2 (lower is better)
Translates to: SSAHSSRSPWQHSVWTLVLQTQL*EISGSG
Trigger: GCCTGAGCCAGAGATTTCCCAAAGCTGAGTTTGCAG...TACCAAAGTCCACACGGAATGCTGCCATGGAGATCTGCTTGAATGTGCTGATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476441.6
3UTR CAA 90 bp CCATGGCAGCATTCCGTGTGGACTTTGGTAAGATCTGTCACTAACTaGGAAACTTCTGCAAACTCAGCTTTGGGAAATCTCTGGCTCAGG +
Preference number: 2 (lower is better)
Translates to: PWQHSVWTLVRSVTN*ETSANSALGNLWLR
Trigger: CCTGAGCCAGAGATTTCCCAAAGCTGAGTTTGCAGAAGTTTCCAAGTTAGTGACAGATCTTACCAAAGTCCACACGGAATGCTGCCATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476441.6
3UTR CAA 90 bp GCTGAAAAGCATGGTCGCCTGTTCACCAAGGATTCTGTGCAGCATTaGGTGACTCTGTCACTTACTGGCGTTTTCTCATGCAACACACAT +
Preference number: 2 (lower is better)
Translates to: AEKHGRLFTKDSVQH*VTLSLTGVFSCNTH
Trigger: ATGTGTGTTGCATGAGAAAACGCCAGTAAGTGACAGAGTCACCAAATGCTGCACAGAATCCTTGGTGAACAGGCGACCATGCTTTTCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476441.6
3UTR-3UTR CCA 90 bp GGTCTCCTTATCGTCAGCCTTGCAGCACTTCTCTACAAAAGCTGCGAAATCATCGCTCTTTTGTTGCCTTaGGCTTGTGTTTCACGAGCT +
Preference number: 2 (lower is better)
Translates to: GLLIVSLAALLYKSCEIIALLLP*ACVSRA
Trigger: AGCTCGTGAAACACAAGCCCAAGGCAACAAAAGAGC...GATGATTTCGCAGCTTTTGTAGAGAAGTGCTGCAAGGCTGACGATAAGGAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476441.6
3UTR-3UTR GCA 90 bp AGAGCTGAAAAGCATGGTCGCCTGTTCACCAAGGATTCTGTGCAGCATTTGGTGCAGGAAGACATCCTTTaGCTCAGCATAGTTTTTGCA +
Preference number: 2 (lower is better)
Translates to: RAEKHGRLFTKDSVQHLVQEDIL*LSIVFA
Trigger: TGCAAAAACTATGCTGAGGCAAAGGATGTCTTCCTG...CACCAAATGCTGCACAGAATCCTTGGTGAACAGGCGACCATGCTTTTCAGCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476441.6
3UTR CAA 90 bp TCAGCACATTCAAGCAGATCTCCATGGCAGCATTCCGTGTGGACTTaGGTAAGATCTGTCACTAACTTGGAAACTTCTGCAAACTCAGCT +
Preference number: 2 (lower is better)
Translates to: SAHSSRSPWQHSVWT*VRSVTNLETSANSA
Trigger: AGCTGAGTTTGCAGAAGTTTCCAAGTTAGTGACAGATCTTACCAAAGTCCACACGGAATGCTGCCATGGAGATCTGCTTGAATGTGCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476441.6
3UTR-3UTR CCA 90 bp TCTCTCCTTCTCAGAAAGTGTGCATATATCTGCATGGAAGGTGAATGTTTCAGCTCAAGCAGATCTCCATaGCAGCATTCCGTGTGGACT +
Preference number: 2 (lower is better)
Translates to: SLLLRKCAYICMEGECFSSSRSP*QHSVWT
Trigger: AGTCCACACGGAATGCTGCCATGGAGATCTGCTTGA...GCTGAAACATTCACCTTCCATGCAGATATATGCACACTTTCTGAGAAGGAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476441.6
3UTR-3UTR CCA 90 bp CTGGCGTTTTCTCATGCAACACACATAACTGGTTCAGGACCACGGATAGATAGTTTTCACAGATATACTTaGCAAGGTCCGCCCTGTCAT +
Preference number: 2 (lower is better)
Translates to: LAFSHATHITGSGPRIDSFHRYT*QGPPCH
Trigger: ATGACAGGGCGGACCTTGCCAAGTATATCTGTGAAA...ACTATCTATCCGTGGTCCTGAACCAGTTATGTGTGTTGCATGAGAAAACGCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476441.6
3UTR CAA 90 bp GCTGCGAAATCATCCATAACAGCTTTCAGTTGCTCTTTTGTTGCCTaGGGCTTGTGTTTCACGAGCTCAACAAGTGCAGTTTGTTTCTTG +
Preference number: 2 (lower is better)
Translates to: AAKSSITAFSCSFVA*GLCFTSSTSAVCFL
Trigger: CAAGAAACAAACTGCACTTGTTGAGCTCGTGAAACACAAGCCCAAGGCAACAAAAGAGCAACTGAAAGCTGTTATGGATGATTTCGCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476441.6
3UTR CAA 90 bp GCACTTCTCTACAAAAGCTGCGAAATCATCCATAACAGCTTTCAGTaGCTCTTTTGTTGCCTTGGGCTTGTGTTTCACGAGCTCAACAAG +
Preference number: 2 (lower is better)
Translates to: ALLYKSCEIIHNSFQ*LFCCLGLVFHELNK
Trigger: CTTGTTGAGCTCGTGAAACACAAGCCCAAGGCAACAAAAGAGCAACTGAAAGCTGTTATGGATGATTTCGCAGCTTTTGTAGAGAAGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476441.6
3UTR-3UTR TCA 90 bp ACTTCCAGAGCTGAAAAGCATGGTCGCCTGTTCACCAAGGATTCTGTGCAGCATATTCTCATGGTAGGCTaGGATGCTTTTAAATGTGAT +
Preference number: 2 (lower is better)
Translates to: TSRAEKHGRLFTKDSVQHILMVG*DAFKCD
Trigger: ATCACATTTAAAAGCATCTCAGCCTACCATGAGAAT...ATGCTGCACAGAATCCTTGGTGAACAGGCGACCATGCTTTTCAGCTCTGGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476441.6
3UTR-3UTR GCA 90 bp TCTGCAGCGGCACAGCACTTCTCTAGAGTGGTTTCATATGTCTTGGCAAGTCTCATTCATACAAAAACATaGCCAGGAAGACATCCTTTG +
Preference number: 2 (lower is better)
Translates to: SAAAQHFSRVVSYVLASLIHTKT*PGRHPL
Trigger: CAAAGGATGTCTTCCTGGGCATGTTTTTGTATGAAT...GAGACTTGCCAAGACATATGAAACCACTCTAGAGAAGTGCTGTGCCGCTGCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476441.6
3UTR-3UTR CCA 90 bp CAGCTAATGAAGGCAAGTCAGCAGGCATCTCATCATTTTCCACTTCGGCAATGCGATCTGTCACTAACTTaGAAACTTCTGCAAACTCAG +
Preference number: 2 (lower is better)
Translates to: QLMKASQQASHHFPLRQCDLSLT*KLLQTQ
Trigger: CTGAGTTTGCAGAAGTTTCCAAGTTAGTGACAGATC...GCATTGCCGAAGTGGAAAATGATGAGATGCCTGCTGACTTGCCTTCATTAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476441.6
3UTR-3UTR GCA 90 bp GCGTTTTCTCATGCAACACACATAACTGGTTCAGGACCACGGATAGATAGTCTTTTTCCACTTCGGCAATaGAGTGGGATTTTTCCAACA +
Preference number: 2 (lower is better)
Translates to: AFSHATHITGSGPRIDSLFPLRQ*SGIFPT
Trigger: TGTTGGAAAAATCCCACTGCATTGCCGAAGTGGAAA...AAGACTATCTATCCGTGGTCCTGAACCAGTTATGTGTGTTGCATGAGAAAACGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000476441.6
3UTR-3UTR CCA 90 bp TCTCTCCTTCTCAGAAAGTGTGCATATATCTGCATGGAAGGTGAATGTTTCAGCACTTCGGCAATGCAGTaGGATTTTTCCAACAGAGGT +
Preference number: 2 (lower is better)
Translates to: SLLLRKCAYICMEGECFSTSAMQ*DFSNRG
Trigger: ACCTCTGTTGGAAAAATCCCACTGCATTGCCGAAGT...GCTGAAACATTCACCTTCCATGCAGATATATGCACACTTTCTGAGAAGGAGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476441.6
3UTR CAA 90 bp ATTTGCTGCCCACTTTTCCTAGGTTTCTTGAGACCTCTACAAGAGTaGGAGTTGACACTTGGGGTACTTTCTTGGTGTAACGAACTAATA +
Preference number: 2 (lower is better)
Translates to: ICCPLFLGFLRPLQE*ELTLGVLSWCNELI
Trigger: TATTAGTTCGTTACACCAAGAAAGTACCCCAAGTGTCAACTCCAACTCTTGTAGAGGTCTCAAGAAACCTAGGAAAAGTGGGCAGCAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476441.6
3UTR CAA 90 bp GTGCATATATCTGCATGGAAGGTGAATGTTTCAGCATTAAACTCTTaGGGAACGTATGTTTCATCGACTTCCAGAGCTGAAAAGCATGGT +
Preference number: 2 (lower is better)
Translates to: VHISAWKVNVSALNS*GTYVSSTSRAEKHG
Trigger: ACCATGCTTTTCAGCTCTGGAAGTCGATGAAACATACGTTCCCAAAGAGTTTAATGCTGAAACATTCACCTTCCATGCAGATATATGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476441.6
3UTR CAA 90 bp AAATCATCCATAACAGCTTTCAGTTGCTCTTTTGTTGCCTTGGGCTaGTGTTTCACGAGCTCAACAAGTGCAGTTTGTTTCTTGATTTGT +
Preference number: 2 (lower is better)
Translates to: KSSITAFSCSFVALG*CFTSSTSAVCFLIC
Trigger: ACAAATCAAGAAACAAACTGCACTTGTTGAGCTCGTGAAACACAAGCCCAAGGCAACAAAAGAGCAACTGAAAGCTGTTATGGATGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476441.6
3UTR-3UTR TCA 90 bp TTAGCCCACAAGAAACTAGAAATCCTCTACCGAAGTGGAATAAGAGAGAACACTATTCTCATGGTAGGCTaGGATGCTTTTAAATGTGAT +
Preference number: 2 (lower is better)
Translates to: LAHKKLEILYRSGIRENTILMVG*DAFKCD
Trigger: ATCACATTTAAAAGCATCTCAGCCTACCATGAGAAT...AGTGTTCTCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTTCTTGTGGGCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
3UTR GCA 72 bp CCTCCTCGGCAAAGCAGGTCTCCTTATCGTCAGCCTTaGAGCACTTCTCTACAAAAGCTGCGAAATCATCCA +
Preference number: 3 (lower is better)
Translates to: PPRQSRSPYRQP*STSLQKLRNHP
Trigger: TGGATGATTTCGCAGCTTTTGTAGAGAAGTGCTGCAAGGCTGACGATAAGGAGACCTGCTTTGCCGAGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476441.6
3UTR CCA 72 bp TCCGCCCTGTCATCAGCACATTCAAGCAGATCTCCATaGCAGCATTCCGTGTGGACTTTGGTAAGATCTGTC +
Preference number: 3 (lower is better)
Translates to: SALSSAHSSRSP*QHSVWTLVRSV
Trigger: GACAGATCTTACCAAAGTCCACACGGAATGCTGCCATGGAGATCTGCTTGAATGTGCTGATGACAGGGCGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476441.6
3UTR-3UTR CAA 90 bp TTTACCCTCCTCGGCAAAGCAGGTCTCCTTATCGTCAGCCTTGCAGCACTTCTCTTTTTAGACAGGGTGTaGGCTTTACACCAACGAAAA +
Preference number: 3 (lower is better)
Translates to: FTLLGKAGLLIVSLAALLFLDRV*ALHQRK
Trigger: TTTTCGTTGGTGTAAAGCCAACACCCTGTCTAAAAA...GAGAAGTGCTGCAAGGCTGACGATAAGGAGACCTGCTTTGCCGAGGAGGGTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476441.6
3UTR-3UTR CAA 90 bp AGAGCTGAAAAGCATGGTCGCCTGTTCACCAAGGATTCTGTGCAGCATTTGGTGCATTCCGTGTGGACTTaGGTAAGATCTGTCACTAAC +
Preference number: 3 (lower is better)
Translates to: RAEKHGRLFTKDSVQHLVHSVWT*VRSVTN
Trigger: GTTAGTGACAGATCTTACCAAAGTCCACACGGAATG...CACCAAATGCTGCACAGAATCCTTGGTGAACAGGCGACCATGCTTTTCAGCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476441.6
3UTR-3UTR CAA 90 bp TTTTACCCTCCTCGGCAAAGCAGGTCTCCTTATCGTCAGCCTTGCAGCACTTCTCTTTTCCTAGGTTTCTaGAGACCTCTACAAGAGTTG +
Preference number: 3 (lower is better)
Translates to: FYPPRQSRSPYRQPCSTSLFLGF*RPLQEL
Trigger: CAACTCTTGTAGAGGTCTCAAGAAACCTAGGAAAAG...AGAAGTGCTGCAAGGCTGACGATAAGGAGACCTGCTTTGCCGAGGAGGGTAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476441.6
3UTR-3UTR CAA 90 bp CTGGCGTTTTCTCATGCAACACACATAACTGGTTCAGGACCACGGATAGATAGTCCAGGAAGACATCCTTaGCCTCAGCATAGTTTTTGC +
Preference number: 3 (lower is better)
Translates to: LAFSHATHITGSGPRIDSPGRHP*PQHSFC
Trigger: GCAAAAACTATGCTGAGGCAAAGGATGTCTTCCTGG...ACTATCTATCCGTGGTCCTGAACCAGTTATGTGTGTTGCATGAGAAAACGCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476441.6
3UTR TCA 72 bp CTCTTTGGGAACGTATGTTTCATCGACTTCCAGAGCTaGAAAGCATGGTCGCCTGTTCACCAAGGATTCTGT +
Preference number: 3 (lower is better)
Translates to: LFGNVCFIDFQS*KAWSPVHQGFC
Trigger: ACAGAATCCTTGGTGAACAGGCGACCATGCTTTTCAGCTCTGGAAGTCGATGAAACATACGTTCCCAAAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476441.6
3UTR-3UTR CAA 90 bp ACATCCTTACTTTCAACAAAATCAGCAGCTAATGAAGGCAAGTCAGCAGGCATCTCTGCAAACTCAGCTTaGGGAAATCTCTGGCTCAGG +
Preference number: 3 (lower is better)
Translates to: TSLLSTKSAANEGKSAGISANSA*GNLWLR
Trigger: CCTGAGCCAGAGATTTCCCAAAGCTGAGTTTGCAGA...GATGCCTGCTGACTTGCCTTCATTAGCTGCTGATTTTGTTGAAAGTAAGGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476441.6
3UTR-3UTR CAA 90 bp CAGATATACTTGGCAAGGTCCGCCCTGTCATCAGCACATTCAAGCAGATCTCCAAGATCTGTCACTAACTaGGAAACTTCTGCAAACTCA +
Preference number: 3 (lower is better)
Translates to: QIYLARSALSSAHSSRSPRSVTN*ETSANS
Trigger: TGAGTTTGCAGAAGTTTCCAAGTTAGTGACAGATCT...TGGAGATCTGCTTGAATGTGCTGATGACAGGGCGGACCTTGCCAAGTATATCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476441.6
3UTR-3UTR CAA 90 bp TCTCTCCTTCTCAGAAAGTGTGCATATATCTGCATGGAAGGTGAATGTTTCAGCGTGGTTTCATATGTCTaGGCAAGTCTCAGCAGCAGC +
Preference number: 3 (lower is better)
Translates to: SLLLRKCAYICMEGECFSVVSYV*ASLSSS
Trigger: GCTGCTGCTGAGACTTGCCAAGACATATGAAACCAC...GCTGAAACATTCACCTTCCATGCAGATATATGCACACTTTCTGAGAAGGAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476441.6
3UTR GCA 72 bp CATTTGGTGACTCTGTCACTTACTGGCGTTTTCTCATaGAACACACATAACTGGTTCAGGACCACGGATAGA +
Preference number: 3 (lower is better)
Translates to: HLVTLSLTGVFS*NTHNWFRTTDR
Trigger: TCTATCCGTGGTCCTGAACCAGTTATGTGTGTTGCATGAGAAAACGCCAGTAAGTGACAGAGTCACCAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476441.6
3UTR-3UTR CAA 90 bp ACATCCTTACTTTCAACAAAATCAGCAGCTAATGAAGGCAAGTCAGCAGGCATCTTTTCACAGATATACTaGGCAAGGTCCGCCCTGTCA +
Preference number: 3 (lower is better)
Translates to: TSLLSTKSAANEGKSAGIFSQIY*ARSALS
Trigger: TGACAGGGCGGACCTTGCCAAGTATATCTGTGAAAA...GATGCCTGCTGACTTGCCTTCATTAGCTGCTGATTTTGTTGAAAGTAAGGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476441.6
3UTR TCA 72 bp TCACAGCATTCCTTCAGTTTACTGGAGATCGAATCTTaGTTTTCACAGATATACTTGGCAAGGTCCGCCCTG +
Preference number: 3 (lower is better)
Translates to: SQHSFSLLEIES*FSQIYLARSAL
Trigger: CAGGGCGGACCTTGCCAAGTATATCTGTGAAAATCAAGATTCGATCTCCAGTAAACTGAAGGAATGCTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476441.6
3UTR GCA 72 bp ACAAAAGCTGCGAAATCATCCATAACAGCTTTCAGTTaGTCTTTTGTTGCCTTGGGCTTGTGTTTCACGAGC +
Preference number: 3 (lower is better)
Translates to: TKAAKSSITAFS*SFVALGLCFTS
Trigger: GCTCGTGAAACACAAGCCCAAGGCAACAAAAGAGCAACTGAAAGCTGTTATGGATGATTTCGCAGCTTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476441.6
3UTR CCA 72 bp TACTGGAGATCGAATCTTGATTTTCACAGATATACTTaGCAAGGTCCGCCCTGTCATCAGCACATTCAAGCA +
Preference number: 3 (lower is better)
Translates to: YWRSNLDFHRYT*QGPPCHQHIQA
Trigger: TGCTTGAATGTGCTGATGACAGGGCGGACCTTGCCAAGTATATCTGTGAAAATCAAGATTCGATCTCCAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476441.6
3UTR GCA 72 bp CTTATCGTCAGCCTTGCAGCACTTCTCTACAAAAGCTaGGAAATCATCCATAACAGCTTTCAGTTGCTCTTT +
Preference number: 3 (lower is better)
Translates to: LIVSLAALLYKS*EIIHNSFQLLF
Trigger: AAAGAGCAACTGAAAGCTGTTATGGATGATTTCGCAGCTTTTGTAGAGAAGTGCTGCAAGGCTGACGATAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476441.6
3UTR CCA 72 bp ATTAGCCCACAAGAAACTAGAAATCCTCTACCGAAGTaGAATAAGAGAGAACACTGGAACTTCCACAGAACC +
Preference number: 3 (lower is better)
Translates to: ISPQETRNPLPK*NKREHWNFHRT
Trigger: GGTTCTGTGGAAGTTCCAGTGTTCTCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTTCTTGTGGGCTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
3UTR-3UTR CAA 90 bp GCCCACAAGAAACTAGAAATCCTCTACCGAAGTGGAATAAGAGAGAACACTGGATTTTTAGACAGGGTGTaGGCTTTACACCAACGAAAA +
Preference number: 3 (lower is better)
Translates to: AHKKLEILYRSGIRENTGFLDRV*ALHQRK
Trigger: TTTTCGTTGGTGTAAAGCCAACACCCTGTCTAAAAA...TCCAGTGTTCTCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTTCTTGTGGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
3UTR CCA 72 bp CTACAAGAGTTGGAGTTGACACTTGGGGTACTTTCTTaGTGTAACGAACTAATAGCGCATTCTGGAATTTGT +
Preference number: 3 (lower is better)
Translates to: LQELELTLGVLS*CNELIAHSGIC
Trigger: ACAAATTCCAGAATGCGCTATTAGTTCGTTACACCAAGAAAGTACCCCAAGTGTCAACTCCAACTCTTGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476441.6
3UTR CCA 72 bp TGTCTCTCCTTCTCAGAAAGTGTGCATATATCTGCATaGAAGGTGAATGTTTCAGCATTAAACTCTTTGGGA +
Preference number: 3 (lower is better)
Translates to: CLSFSESVHISA*KVNVSALNSLG
Trigger: TCCCAAAGAGTTTAATGCTGAAACATTCACCTTCCATGCAGATATATGCACACTTTCTGAGAAGGAGAGACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476441.6
3UTR GCA 72 bp ACTAATAGCGCATTCTGGAATTTGTACTCTCCAAGCTaGTCAAAAAGCTCACAATTTTGTTTGATTAAATTC +
Preference number: 3 (lower is better)
Translates to: TNSAFWNLYSPS*SKSSQFCLIKF
Trigger: GAATTTAATCAAACAAAATTGTGAGCTTTTTGAGCAGCTTGGAGAGTACAAATTCCAGAATGCGCTATTAGT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476441.6
CDS-3UTR TCA 90 bp TATACTTGGCAAGGTCCGCCCTGTCATCAGCACATTCAAGCAGATCTCCATGGCGGAGACTGGCACACTTaGGTCTCTGTTTGGCAGACG +
Preference number: 4 (lower is better)
Translates to: YTWQGPPCHQHIQADLHGGDWHT*VSVWQT
Trigger: CGTCTGCCAAACAGAGACTCAAGTGTGCCAGTCTCC...GCCATGGAGATCTGCTTGAATGTGCTGATGACAGGGCGGACCTTGCCAAGTATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476441.6
3UTR CAA 72 bp CCCTCCTCGGCAAAGCAGGTCTCCTTATCGTCAGCCTaGCAGCACTTCTCTACAAAAGCTGCGAAATCATCC +
Preference number: 4 (lower is better)
Translates to: PSSAKQVSLSSA*QHFSTKAAKSS
Trigger: GGATGATTTCGCAGCTTTTGTAGAGAAGTGCTGCAAGGCTGACGATAAGGAGACCTGCTTTGCCGAGGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476441.6
CDS-3UTR GCA 90 bp TATACTTGGCAAGGTCCGCCCTGTCATCAGCACATTCAAGCAGATCTCCATGGCTTACCCACTTCATTGTaGCAAAGGCGTGTGGGGTTG +
Preference number: 4 (lower is better)
Translates to: YTWQGPPCHQHIQADLHGLPTSL*QRRVGL
Trigger: CAACCCCACACGCCTTTGGCACAATGAAGTGGGTAA...GCCATGGAGATCTGCTTGAATGTGCTGATGACAGGGCGGACCTTGCCAAGTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476441.6
CDS-3UTR CCA 90 bp CAGCTAATGAAGGCAAGTCAGCAGGCATCTCATCATTTTCCACTTCGGCAATGCGCTTTGGGAAATCTCTaGCTCAGGCGAGCTACTGCC +
Preference number: 4 (lower is better)
Translates to: QLMKASQQASHHFPLRQCALGNL*LRRATA
Trigger: GGCAGTAGCTCGCCTGAGCCAGAGATTTCCCAAAGC...GCATTGCCGAAGTGGAAAATGATGAGATGCCTGCTGACTTGCCTTCATTAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476441.6
CDS-3UTR TCA 90 bp AGAGCTGAAAAGCATGGTCGCCTGTTCACCAAGGATTCTGTGCAGCATTTGGTGATCGACTTCCAGAGCTaGAAAGCATGGTCGCCTGTT +
Preference number: 4 (lower is better)
Translates to: RAEKHGRLFTKDSVQHLVIDFQS*KAWSPV
Trigger: AACAGGCGACCATGCTTTTCAGCTCTGGAAGTCGAT...CACCAAATGCTGCACAGAATCCTTGGTGAACAGGCGACCATGCTTTTCAGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476441.6
3UTR CAA 72 bp CATGGTCGCCTGTTCACCAAGGATTCTGTGCAGCATTaGGTGACTCTGTCACTTACTGGCGTTTTCTCATGC +
Preference number: 4 (lower is better)
Translates to: HGRLFTKDSVQH*VTLSLTGVFSC
Trigger: GCATGAGAAAACGCCAGTAAGTGACAGAGTCACCAAATGCTGCACAGAATCCTTGGTGAACAGGCGACCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476441.6
CDS-3UTR GCA 90 bp GGCAAGTCAGCAGGCATCTCATCATTTTCCACTTCGGCAATGCAGTGGGATTTTGCGAGCTACTGCCCATaGTTTGAAAGCTCTTTCTCC +
Preference number: 4 (lower is better)
Translates to: GKSAGISSFSTSAMQWDFASYCP*FESSFS
Trigger: GGAGAAAGAGCTTTCAAAGCATGGGCAGTAGCTCGC...AAAATCCCACTGCATTGCCGAAGTGGAAAATGATGAGATGCCTGCTGACTTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476441.6
CDS-3UTR CCA 90 bp AATCCTCTACCGAAGTGGAATAAGAGAGAACACTGGAACTTCCACAGAACCTACGCTTTGGGAAATCTCTaGCTCAGGCGAGCTACTGCC +
Preference number: 4 (lower is better)
Translates to: NPLPKWNKREHWNFHRTYALGNL*LRRATA
Trigger: GGCAGTAGCTCGCCTGAGCCAGAGATTTCCCAAAGC...GTAGGTTCTGTGGAAGTTCCAGTGTTCTCTCTTATTCCACTTCGGTAGAGGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295897.9
CDS-3UTR CCA 90 bp GGCAAGTCAGCAGGCATCTCATCATTTTCCACTTCGGCAATGCAGTGGGATTTTTCAAGCAGATCTCCATaGCAGCATTCCGTGTGGACT +
Preference number: 4 (lower is better)
Translates to: GKSAGISSFSTSAMQWDFSSRSP*QHSVWT
Trigger: AGTCCACACGGAATGCTGCCATGGAGATCTGCTTGA...AAAATCCCACTGCATTGCCGAAGTGGAAAATGATGAGATGCCTGCTGACTTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476441.6
CDS-3UTR GCA 90 bp TATACTTGGCAAGGTCCGCCCTGTCATCAGCACATTCAAGCAGATCTCCATGGCACTGGCGTTTTCTCATaGAACACACATAACTGGTTC +
Preference number: 4 (lower is better)
Translates to: YTWQGPPCHQHIQADLHGTGVFS*NTHNWF
Trigger: GAACCAGTTATGTGTGTTGCATGAGAAAACGCCAGT...GCCATGGAGATCTGCTTGAATGTGCTGATGACAGGGCGGACCTTGCCAAGTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476441.6
CDS-3UTR TCA 90 bp ATTAGCCCACAAGAAACTAGAAATCCTCTACCGAAGTGGAATAAGAGAGAACACGGAGACTGGCACACTTaGGTCTCTGTTTGGCAGACG +
Preference number: 4 (lower is better)
Translates to: ISPQETRNPLPKWNKREHGDWHT*VSVWQT
Trigger: CGTCTGCCAAACAGAGACTCAAGTGTGCCAGTCTCC...GTGTTCTCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTTCTTGTGGGCTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295897.9
CDS-3UTR TCA 90 bp GCCCACAAGAAACTAGAAATCCTCTACCGAAGTGGAATAAGAGAGAACACTGGAATCGACTTCCAGAGCTaGAAAGCATGGTCGCCTGTT +
Preference number: 4 (lower is better)
Translates to: AHKKLEILYRSGIRENTGIDFQS*KAWSPV
Trigger: AACAGGCGACCATGCTTTTCAGCTCTGGAAGTCGAT...TCCAGTGTTCTCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTTCTTGTGGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS-3UTR TCA 90 bp AATCCTCTACCGAAGTGGAATAAGAGAGAACACTGGAACTTCCACAGAACCTACAAAGGCGTGTGGGGTTaGCAGAAGAGAAAAGCTAGG +
Preference number: 4 (lower is better)
Translates to: NPLPKWNKREHWNFHRTYKGVWG*QKRKAR
Trigger: CCTAGCTTTTCTCTTCTGTCAACCCCACACGCCTTT...GTAGGTTCTGTGGAAGTTCCAGTGTTCTCTCTTATTCCACTTCGGTAGAGGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621628.4
CDS-3UTR GCA 90 bp ACTTCCAGAGCTGAAAAGCATGGTCGCCTGTTCACCAAGGATTCTGTGCAGCATCCTTCTCAGAAAGTGTaGATATATCTGCATGGAAGG +
Preference number: 4 (lower is better)
Translates to: TSRAEKHGRLFTKDSVQHPSQKV*IYLHGR
Trigger: CCTTCCATGCAGATATATGCACACTTTCTGAGAAGG...ATGCTGCACAGAATCCTTGGTGAACAGGCGACCATGCTTTTCAGCTCTGGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476441.6
CDS-3UTR GCA 90 bp CAGCACTTCTCTAGAGTGGTTTCATATGTCTTGGCAAGTCTCAGCAGCAGCACGATAACAGCTTTCAGTTaGTCTTTTGTTGCCTTGGGC +
Preference number: 4 (lower is better)
Translates to: QHFSRVVSYVLASLSSSTITAFS*SFVALG
Trigger: GCCCAAGGCAACAAAAGAGCAACTGAAAGCTGTTAT...CGTGCTGCTGCTGAGACTTGCCAAGACATATGAAACCACTCTAGAGAAGTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476441.6
CDS-3UTR GCA 90 bp TTTTACCCTCCTCGGCAAAGCAGGTCTCCTTATCGTCAGCCTTGCAGCACTTCTCTTCTCTACAAAAGCTaGGAAATCATCCATAACAGC +
Preference number: 4 (lower is better)
Translates to: FYPPRQSRSPYRQPCSTSLLYKS*EIIHNS
Trigger: GCTGTTATGGATGATTTCGCAGCTTTTGTAGAGAAG...AGAAGTGCTGCAAGGCTGACGATAAGGAGACCTGCTTTGCCGAGGAGGGTAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476441.6
CDS-3UTR CCA 90 bp TTTTACCCTCCTCGGCAAAGCAGGTCTCCTTATCGTCAGCCTTGCAGCACTTCTGATCTGTCACTAACTTaGAAACTTCTGCAAACTCAG +
Preference number: 4 (lower is better)
Translates to: FYPPRQSRSPYRQPCSTSDLSLT*KLLQTQ
Trigger: CTGAGTTTGCAGAAGTTTCCAAGTTAGTGACAGATC...AGAAGTGCTGCAAGGCTGACGATAAGGAGACCTGCTTTGCCGAGGAGGGTAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476441.6
CDS-3UTR CCA 90 bp AATCCTCTACCGAAGTGGAATAAGAGAGAACACTGGAACTTCCACAGAACCTACTCAAGCAGATCTCCATaGCAGCATTCCGTGTGGACT +
Preference number: 4 (lower is better)
Translates to: NPLPKWNKREHWNFHRTYSSRSP*QHSVWT
Trigger: AGTCCACACGGAATGCTGCCATGGAGATCTGCTTGA...GTAGGTTCTGTGGAAGTTCCAGTGTTCTCTCTTATTCCACTTCGGTAGAGGATT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295897.9
CDS-3UTR CCA 90 bp GGTCTCCTTATCGTCAGCCTTGCAGCACTTCTCTACAAAAGCTGCGAAATCATCTGCAACACACATAACTaGTTCAGGACCACGGATAGA +
Preference number: 4 (lower is better)
Translates to: GLLIVSLAALLYKSCEIICNTHN*FRTTDR
Trigger: TCTATCCGTGGTCCTGAACCAGTTATGTGTGTTGCA...GATGATTTCGCAGCTTTTGTAGAGAAGTGCTGCAAGGCTGACGATAAGGAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476441.6
CDS-3UTR TCA 90 bp AGCACTTCTCTAGAGTGGTTTCATATGTCTTGGCAAGTCTCAGCAGCAGCACGATACAAGAGTTGGAGTTaGCACTTGGGGTACTTTCTT +
Preference number: 4 (lower is better)
Translates to: STSLEWFHMSWQVSAAARYKSWS*HLGYFL
Trigger: AAGAAAGTACCCCAAGTGTCAACTCCAACTCTTGTA...TCGTGCTGCTGCTGAGACTTGCCAAGACATATGAAACCACTCTAGAGAAGTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476441.6
CDS-3UTR TCA 90 bp CACAAGAAACTAGAAATCCTCTACCGAAGTGGAATAAGAGAGAACACTGGAACTCTGTGCAGCATTTGGTaGCTCTGTCACTTACTGGCG +
Preference number: 4 (lower is better)
Translates to: HKKLEILYRSGIRENTGTLCSIW*LCHLLA
Trigger: CGCCAGTAAGTGACAGAGTCACCAAATGCTGCACAG...AGTTCCAGTGTTCTCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTTCTTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS-3UTR TCA 90 bp ATGCAGTGGGATTTTTCCAACAGAGGTTTTTCACAGCATTCCTTCAGTTTACTGCTGTGCAGCATTTGGTaGCTCTGTCACTTACTGGCG +
Preference number: 4 (lower is better)
Translates to: MQWDFSNRGFSQHSFSLLLCSIW*LCHLLA
Trigger: CGCCAGTAAGTGACAGAGTCACCAAATGCTGCACAG...CAGTAAACTGAAGGAATGCTGTGAAAAACCTCTGTTGGAAAAATCCCACTGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000476441.6
CDS-3UTR TCA 90 bp TACCGAAGTGGAATAAGAGAGAACACTGGAACTTCCACAGAACCTACAGAATTTCTGTGCAGCATTTGGTaGCTCTGTCACTTACTGGCG +
Preference number: 4 (lower is better)
Translates to: YRSGIRENTGTSTEPTEFLCSIW*LCHLLA
Trigger: CGCCAGTAAGTGACAGAGTCACCAAATGCTGCACAG...AAATTCTGTAGGTTCTGTGGAAGTTCCAGTGTTCTCTCTTATTCCACTTCGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS-3UTR TCA 90 bp GAAACTAGAAATCCTCTACCGAAGTGGAATAAGAGAGAACACTGGAACTTCCACATCGACTTCCAGAGCTaGAAAGCATGGTCGCCTGTT +
Preference number: 4 (lower is better)
Translates to: ETRNPLPKWNKREHWNFHIDFQS*KAWSPV
Trigger: AACAGGCGACCATGCTTTTCAGCTCTGGAAGTCGAT...GTGGAAGTTCCAGTGTTCTCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS-3UTR GCA 90 bp AGCACTTCTCTAGAGTGGTTTCATATGTCTTGGCAAGTCTCAGCAGCAGCACGATTTCCACTTCGGCAATaGAGTGGGATTTTTCCAACA +
Preference number: 4 (lower is better)
Translates to: STSLEWFHMSWQVSAAARFPLRQ*SGIFPT
Trigger: TGTTGGAAAAATCCCACTGCATTGCCGAAGTGGAAA...TCGTGCTGCTGCTGAGACTTGCCAAGACATATGAAACCACTCTAGAGAAGTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476441.6
CDS-3UTR GCA 90 bp ATTAGCCCACAAGAAACTAGAAATCCTCTACCGAAGTGGAATAAGAGAGAACACGCATTCATGAGGATCTaGAGCGGCACAGCACTTCTC +
Preference number: 4 (lower is better)
Translates to: ISPQETRNPLPKWNKREHAFMRI*SGTALL
Trigger: GAGAAGTGCTGTGCCGCTGCAGATCCTCATGAATGC...GTGTTCTCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTTCTTGTGGGCTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS-3UTR CCA 90 bp TTAGCCCACAAGAAACTAGAAATCCTCTACCGAAGTGGAATAAGAGAGAACACTCATCACATCAACCTCTaGTCTCACCAATCGGGGGAG +
Preference number: 4 (lower is better)
Translates to: LAHKKLEILYRSGIRENTHHINL*SHQSGE
Trigger: CTCCCCCGATTGGTGAGACCAGAGGTTGATGTGATG...AGTGTTCTCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTTCTTGTGGGCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS-3UTR CCA 90 bp TCTGCAGCGGCACAGCACTTCTCTAGAGTGGTTTCATATGTCTTGGCAAGTCTCCTTTCTCCAAATTTTTaGAGACTGGCACACTTGAGT +
Preference number: 4 (lower is better)
Translates to: SAAAQHFSRVVSYVLASLLSPNF*RLAHLS
Trigger: ACTCAAGTGTGCCAGTCTCCAAAAATTTGGAGAAAG...GAGACTTGCCAAGACATATGAAACCACTCTAGAGAAGTGCTGTGCCGCTGCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476441.6
CDS-3UTR CCA 90 bp CCATGGCAGCATTCCGTGTGGACTTTGGTAAGATCTGTCACTAACTTGGAAACTTGGTTTCATATGTCTTaGCAAGTCTCAGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: PWQHSVWTLVRSVTNLETWFHMS*QVSAAA
Trigger: TGCTGCTGCTGAGACTTGCCAAGACATATGAAACCA...AGTTTCCAAGTTAGTGACAGATCTTACCAAAGTCCACACGGAATGCTGCCATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476441.6
CDS-3UTR CCA 90 bp GGCAAGTCAGCAGGCATCTCATCATTTTCCACTTCGGCAATGCAGTGGGATTTTCTTGGGGTACTTTCTTaGTGTAACGAACTAATAGCG +
Preference number: 4 (lower is better)
Translates to: GKSAGISSFSTSAMQWDFLGVLS*CNELIA
Trigger: CGCTATTAGTTCGTTACACCAAGAAAGTACCCCAAG...AAAATCCCACTGCATTGCCGAAGTGGAAAATGATGAGATGCCTGCTGACTTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000476441.6
3UTR CAA 72 bp TCAAGCAGATCTCCATGGCAGCATTCCGTGTGGACTTaGGTAAGATCTGTCACTAACTTGGAAACTTCTGCA +
Preference number: 4 (lower is better)
Translates to: SSRSPWQHSVWT*VRSVTNLETSA
Trigger: TGCAGAAGTTTCCAAGTTAGTGACAGATCTTACCAAAGTCCACACGGAATGCTGCCATGGAGATCTGCTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476441.6
CDS-3UTR TCA 90 bp GGCAAGTCAGCAGGCATCTCATCATTTTCCACTTCGGCAATGCAGTGGGATTTTTGTTTGATTAAATTCTaGGGCTCTTCCACAAGAGGT +
Preference number: 4 (lower is better)
Translates to: GKSAGISSFSTSAMQWDFCLIKF*GSSTRG
Trigger: ACCTCTTGTGGAAGAGCCTCAGAATTTAATCAAACA...AAAATCCCACTGCATTGCCGAAGTGGAAAATGATGAGATGCCTGCTGACTTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476441.6
CDS-3UTR TCA 90 bp GAGTTGGAGTTGACACTTGGGGTACTTTCTTGGTGTAACGAACTAATAGCGCATAAGCCTAAGGCAGCTTaGCTTGCAGCAACAAGTTTT +
Preference number: 4 (lower is better)
Translates to: ELELTLGVLSWCNELIAHKPKAA*LAATSF
Trigger: AAAACTTGTTGCTGCAAGTCAAGCTGCCTTAGGCTT...ATGCGCTATTAGTTCGTTACACCAAGAAAGTACCCCAAGTGTCAACTCCAACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476441.6
CDS-3UTR TCA 90 bp GCCCACAAGAAACTAGAAATCCTCTACCGAAGTGGAATAAGAGAGAACACTGGAAAGCCTAAGGCAGCTTaGCTTGCAGCAACAAGTTTT +
Preference number: 4 (lower is better)
Translates to: AHKKLEILYRSGIRENTGKPKAA*LAATSF
Trigger: AAAACTTGTTGCTGCAAGTCAAGCTGCCTTAGGCTT...TCCAGTGTTCTCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTTCTTGTGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS-3UTR GCA 90 bp ATTAGCCCACAAGAAACTAGAAATCCTCTACCGAAGTGGAATAAGAGAGAACACTTACCCACTTCATTGTaGCAAAGGCGTGTGGGGTTG +
Preference number: 4 (lower is better)
Translates to: ISPQETRNPLPKWNKREHLPTSL*QRRVGL
Trigger: CAACCCCACACGCCTTTGGCACAATGAAGTGGGTAA...GTGTTCTCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTTCTTGTGGGCTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS-3UTR GCA 90 bp AAACTAGAAATCCTCTACCGAAGTGGAATAAGAGAGAACACTGGAACTTCCACAGCGAGCTACTGCCCATaGTTTGAAAGCTCTTTCTCC +
Preference number: 4 (lower is better)
Translates to: KLEILYRSGIRENTGTSTASYCP*FESSFS
Trigger: GGAGAAAGAGCTTTCAAAGCATGGGCAGTAGCTCGC...TGTGGAAGTTCCAGTGTTCTCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295897.9
CDS-3UTR GCA 90 bp CAGCGGCACAGCACTTCTCTAGAGTGGTTTCATATGTCTTGGCAAGTCTCAGCAATTCATACAAAAACATaGCCAGGAAGACATCCTTTG +
Preference number: 4 (lower is better)
Translates to: QRHSTSLEWFHMSWQVSAIHTKT*PGRHPL
Trigger: CAAAGGATGTCTTCCTGGGCATGTTTTTGTATGAAT...TGCTGAGACTTGCCAAGACATATGAAACCACTCTAGAGAAGTGCTGTGCCGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476441.6
CDS-3UTR GCA 90 bp AATAGCGCATTCTGGAATTTGTACTCTCCAAGCTGCTCAAAAAGCTCACAATTTGCATTCATGAGGATCTaGAGCGGCACAGCACTTCTC +
Preference number: 4 (lower is better)
Translates to: NSAFWNLYSPSCSKSSQFAFMRI*SGTALL
Trigger: GAGAAGTGCTGTGCCGCTGCAGATCCTCATGAATGC...AAATTGTGAGCTTTTTGAGCAGCTTGGAGAGTACAAATTCCAGAATGCGCTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476441.6
CDS-3UTR GCA 90 bp CAGCACTTCTCTAGAGTGGTTTCATATGTCTTGGCAAGTCTCAGCAGCAGCACGTTGTACTCTCCAAGCTaGTCAAAAAGCTCACAATTT +
Preference number: 4 (lower is better)
Translates to: QHFSRVVSYVLASLSSSTLYSPS*SKSSQF
Trigger: AAATTGTGAGCTTTTTGAGCAGCTTGGAGAGTACAA...CGTGCTGCTGCTGAGACTTGCCAAGACATATGAAACCACTCTAGAGAAGTGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476441.6
CDS-3UTR GCA 90 bp TCATCAGCACATTCAAGCAGATCTCCATGGCAGCATTCCGTGTGGACTTTGGTAGTTTACAACATTTGCTaGCCACTTTTCCTAGGTTTC +
Preference number: 4 (lower is better)
Translates to: SSAHSSRSPWQHSVWTLVVYNIC*PLFLGF
Trigger: GAAACCTAGGAAAAGTGGGCAGCAAATGTTGTAAAC...TACCAAAGTCCACACGGAATGCTGCCATGGAGATCTGCTTGAATGTGCTGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476441.6
CDS-3UTR GCA 90 bp AATCCTCTACCGAAGTGGAATAAGAGAGAACACTGGAACTTCCACAGAACCTACCCTTATCGTCAGCCTTaGAGCACTTCTCTACAAAAG +
Preference number: 4 (lower is better)
Translates to: NPLPKWNKREHWNFHRTYPYRQP*STSLQK
Trigger: CTTTTGTAGAGAAGTGCTGCAAGGCTGACGATAAGG...GTAGGTTCTGTGGAAGTTCCAGTGTTCTCTCTTATTCCACTTCGGTAGAGGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS-3UTR GCA 90 bp GAGTTGGAGTTGACACTTGGGGTACTTTCTTGGTGTAACGAACTAATAGCGCATCCTTATCGTCAGCCTTaGAGCACTTCTCTACAAAAG +
Preference number: 4 (lower is better)
Translates to: ELELTLGVLSWCNELIAHPYRQP*STSLQK
Trigger: CTTTTGTAGAGAAGTGCTGCAAGGCTGACGATAAGG...ATGCGCTATTAGTTCGTTACACCAAGAAAGTACCCCAAGTGTCAACTCCAACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476441.6
CDS-3UTR CCA 90 bp GAAACTAGAAATCCTCTACCGAAGTGGAATAAGAGAGAACACTGGAACTTCCACCAATCGGGGGAGGTTTaGGTTGTCATCTTTGTGTTG +
Preference number: 4 (lower is better)
Translates to: ETRNPLPKWNKREHWNFHQSGEV*VVIFVL
Trigger: CAACACAAAGATGACAACCCAAACCTCCCCCGATTG...GTGGAAGTTCCAGTGTTCTCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS-3UTR CCA 90 bp TACCGAAGTGGAATAAGAGAGAACACTGGAACTTCCACAGAACCTACAGAATTTCTGCAAACTCAGCTTTaGGAAATCTCTGGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: YRSGIRENTGTSTEPTEFLQTQL*EISGSG
Trigger: GCCTGAGCCAGAGATTTCCCAAAGCTGAGTTTGCAG...AAATTCTGTAGGTTCTGTGGAAGTTCCAGTGTTCTCTCTTATTCCACTTCGGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295897.9
CDS-3UTR CCA 90 bp TCTCATCATTTTCCACTTCGGCAATGCAGTGGGATTTTTCCAACAGAGGTTTTTCTGCAAACTCAGCTTTaGGAAATCTCTGGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: SHHFPLRQCSGIFPTEVFLQTQL*EISGSG
Trigger: GCCTGAGCCAGAGATTTCCCAAAGCTGAGTTTGCAG...AAAAACCTCTGTTGGAAAAATCCCACTGCATTGCCGAAGTGGAAAATGATGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000476441.6
CDS-3UTR CCA 90 bp GCCCACAAGAAACTAGAAATCCTCTACCGAAGTGGAATAAGAGAGAACACTGGATGCAACACACATAACTaGTTCAGGACCACGGATAGA +
Preference number: 4 (lower is better)
Translates to: AHKKLEILYRSGIRENTGCNTHN*FRTTDR
Trigger: TCTATCCGTGGTCCTGAACCAGTTATGTGTGTTGCA...TCCAGTGTTCTCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTTCTTGTGGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
3UTR CAA 72 bp TCAGCAGCAGCACGACAGAGTAATCAGGATGCCTTCTaGCATATTCATACAAAAACATGCCCAGGAAGACAT +
Preference number: 4 (lower is better)
Translates to: SAAARQSNQDAF*HIHTKTCPGRH
Trigger: ATGTCTTCCTGGGCATGTTTTTGTATGAATATGCAAGAAGGCATCCTGATTACTCTGTCGTGCTGCTGCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476441.6
3UTR CAA 72 bp CCACTTTTCCTAGGTTTCTTGAGACCTCTACAAGAGTaGGAGTTGACACTTGGGGTACTTTCTTGGTGTAAC +
Preference number: 4 (lower is better)
Translates to: PLFLGFLRPLQE*ELTLGVLSWCN
Trigger: GTTACACCAAGAAAGTACCCCAAGTGTCAACTCCAACTCTTGTAGAGGTCTCAAGAAACCTAGGAAAAGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476441.6
3UTR CAA 72 bp TCATCCATAACAGCTTTCAGTTGCTCTTTTGTTGCCTaGGGCTTGTGTTTCACGAGCTCAACAAGTGCAGTT +
Preference number: 4 (lower is better)
Translates to: SSITAFSCSFVA*GLCFTSSTSAV
Trigger: AACTGCACTTGTTGAGCTCGTGAAACACAAGCCCAAGGCAACAAAAGAGCAACTGAAAGCTGTTATGGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476441.6
CDS-3UTR TCA 90 bp GCCCACAAGAAACTAGAAATCCTCTACCGAAGTGGAATAAGAGAGAACACTGGATACAAGAGTTGGAGTTaGCACTTGGGGTACTTTCTT +
Preference number: 4 (lower is better)
Translates to: AHKKLEILYRSGIRENTGYKSWS*HLGYFL
Trigger: AAGAAAGTACCCCAAGTGTCAACTCCAACTCTTGTA...TCCAGTGTTCTCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTTCTTGTGGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS-3UTR GCA 90 bp GCCCACAAGAAACTAGAAATCCTCTACCGAAGTGGAATAAGAGAGAACACTGGATGTCATGAAAAGCAGTaGACATCACATCAACCTCTG +
Preference number: 4 (lower is better)
Translates to: AHKKLEILYRSGIRENTGCHEKQ*TSHQPL
Trigger: CAGAGGTTGATGTGATGTGCACTGCTTTTCATGACA...TCCAGTGTTCTCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTTCTTGTGGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS-3UTR GCA 90 bp GCCCACAAGAAACTAGAAATCCTCTACCGAAGTGGAATAAGAGAGAACACTGGATTTCCACTTCGGCAATaGAGTGGGATTTTTCCAACA +
Preference number: 4 (lower is better)
Translates to: AHKKLEILYRSGIRENTGFPLRQ*SGIFPT
Trigger: TGTTGGAAAAATCCCACTGCATTGCCGAAGTGGAAA...TCCAGTGTTCTCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTTCTTGTGGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295897.9
CDS-3UTR GCA 90 bp GCCCACAAGAAACTAGAAATCCTCTACCGAAGTGGAATAAGAGAGAACACTGGAACTGGCGTTTTCTCATaGAACACACATAACTGGTTC +
Preference number: 4 (lower is better)
Translates to: AHKKLEILYRSGIRENTGTGVFS*NTHNWF
Trigger: GAACCAGTTATGTGTGTTGCATGAGAAAACGCCAGT...TCCAGTGTTCTCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTTCTTGTGGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS-3UTR CCA 90 bp CACAAGAAACTAGAAATCCTCTACCGAAGTGGAATAAGAGAGAACACTGGAACTCAATCGGGGGAGGTTTaGGTTGTCATCTTTGTGTTG +
Preference number: 4 (lower is better)
Translates to: HKKLEILYRSGIRENTGTQSGEV*VVIFVL
Trigger: CAACACAAAGATGACAACCCAAACCTCCCCCGATTG...AGTTCCAGTGTTCTCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTTCTTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS-3UTR CCA 90 bp CCATGGCAGCATTCCGTGTGGACTTTGGTAAGATCTGTCACTAACTTGGAAACTGCTTTATCAGCAGCTTaGCAACATTCTGTAAAAGCA +
Preference number: 4 (lower is better)
Translates to: PWQHSVWTLVRSVTNLETALSAA*QHSVKA
Trigger: TGCTTTTACAGAATGTTGCCAAGCTGCTGATAAAGC...AGTTTCCAAGTTAGTGACAGATCTTACCAAAGTCCACACGGAATGCTGCCATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476441.6
CDS-3UTR CCA 90 bp TTAGCCCACAAGAAACTAGAAATCCTCTACCGAAGTGGAATAAGAGAGAACACTAAGTTCATCGAGCTTTaGCAACAGGCAGGCAGCTTT +
Preference number: 4 (lower is better)
Translates to: LAHKKLEILYRSGIRENTKFIEL*QQAGSF
Trigger: AAAGCTGCCTGCCTGTTGCCAAAGCTCGATGAACTT...AGTGTTCTCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTTCTTGTGGGCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295897.9
CDS-3UTR CCA 90 bp TTCTTGATTTGTCTCTCCTTCTCAGAAAGTGTGCATATATCTGCATGGAAGGTGAAGTTCATCGAGCTTTaGCAACAGGCAGGCAGCTTT +
Preference number: 4 (lower is better)
Translates to: FLICLSFSESVHISAWKVKFIEL*QQAGSF
Trigger: AAAGCTGCCTGCCTGTTGCCAAAGCTCGATGAACTT...CACCTTCCATGCAGATATATGCACACTTTCTGAGAAGGAGAGACAAATCAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476441.6
CDS-3UTR CCA 90 bp AGTCAGCAGGCATCTCATCATTTTCCACTTCGGCAATGCAGTGGGATTTTTCCAGTGCATATATCTGCATaGAAGGTGAATGTTTCAGCA +
Preference number: 4 (lower is better)
Translates to: SQQASHHFPLRQCSGIFPVHISA*KVNVSA
Trigger: TGCTGAAACATTCACCTTCCATGCAGATATATGCAC...TGGAAAAATCCCACTGCATTGCCGAAGTGGAAAATGATGAGATGCCTGCTGACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476441.6
CDS-3UTR CCA 90 bp AAACTAGAAATCCTCTACCGAAGTGGAATAAGAGAGAACACTGGAACTTCCACAGCTCTTTTGTTGCCTTaGGCTTGTGTTTCACGAGCT +
Preference number: 4 (lower is better)
Translates to: KLEILYRSGIRENTGTSTALLLP*ACVSRA
Trigger: AGCTCGTGAAACACAAGCCCAAGGCAACAAAAGAGC...TGTGGAAGTTCCAGTGTTCTCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS-3UTR CCA 90 bp GTGGGATTTTTCCAACAGAGGTTTTTCACAGCATTCCTTCAGTTTACTGGAGATGCTCTTTTGTTGCCTTaGGCTTGTGTTTCACGAGCT +
Preference number: 4 (lower is better)
Translates to: VGFFQQRFFTAFLQFTGDALLLP*ACVSRA
Trigger: AGCTCGTGAAACACAAGCCCAAGGCAACAAAAGAGC...ATCTCCAGTAAACTGAAGGAATGCTGTGAAAAACCTCTGTTGGAAAAATCCCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000476441.6
CDS-3UTR CCA 90 bp GCCCACAAGAAACTAGAAATCCTCTACCGAAGTGGAATAAGAGAGAACACTGGAAATCCTCTACCGAAGTaGAATAAGAGAGAACACTGG +
Preference number: 4 (lower is better)
Translates to: AHKKLEILYRSGIRENTGNPLPK*NKREHW
Trigger: CCAGTGTTCTCTCTTATTCCACTTCGGTAGAGGATT...TCCAGTGTTCTCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTTCTTGTGGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
3UTR CAA 72 bp TTCACAGCATTCCTTCAGTTTACTGGAGATCGAATCTaGATTTTCACAGATATACTTGGCAAGGTCCGCCCT +
Preference number: 4 (lower is better)
Translates to: FTAFLQFTGDRI*IFTDILGKVRP
Trigger: AGGGCGGACCTTGCCAAGTATATCTGTGAAAATCAAGATTCGATCTCCAGTAAACTGAAGGAATGCTGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476441.6
CDS-3UTR TCA 90 bp CACAAGAAACTAGAAATCCTCTACCGAAGTGGAATAAGAGAGAACACTGGAACTAAGCCTAAGGCAGCTTaGCTTGCAGCAACAAGTTTT +
Preference number: 4 (lower is better)
Translates to: HKKLEILYRSGIRENTGTKPKAA*LAATSF
Trigger: AAAACTTGTTGCTGCAAGTCAAGCTGCCTTAGGCTT...AGTTCCAGTGTTCTCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTTCTTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS-3UTR TCA 90 bp CTGGCGTTTTCTCATGCAACACACATAACTGGTTCAGGACCACGGATAGATAGTATTCTCATGGTAGGCTaGGATGCTTTTAAATGTGAT +
Preference number: 4 (lower is better)
Translates to: LAFSHATHITGSGPRIDSILMVG*DAFKCD
Trigger: ATCACATTTAAAAGCATCTCAGCCTACCATGAGAAT...ACTATCTATCCGTGGTCCTGAACCAGTTATGTGTGTTGCATGAGAAAACGCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476441.6
CDS-3UTR GCA 90 bp TATTTAATTAGCCCACAAGAAACTAGAAATCCTCTACCGAAGTGGAATAAGAGAGCATTCATGAGGATCTaGAGCGGCACAGCACTTCTC +
Preference number: 4 (lower is better)
Translates to: YLISPQETRNPLPKWNKRAFMRI*SGTALL
Trigger: GAGAAGTGCTGTGCCGCTGCAGATCCTCATGAATGC...TCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTTCTTGTGGGCTAATTAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS-3UTR GCA 90 bp GCCCACAAGAAACTAGAAATCCTCTACCGAAGTGGAATAAGAGAGAACACTGGAGTTTACAACATTTGCTaGCCACTTTTCCTAGGTTTC +
Preference number: 4 (lower is better)
Translates to: AHKKLEILYRSGIRENTGVYNIC*PLFLGF
Trigger: GAAACCTAGGAAAAGTGGGCAGCAAATGTTGTAAAC...TCCAGTGTTCTCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTTCTTGTGGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS-3UTR GCA 90 bp ATTAGCCCACAAGAAACTAGAAATCCTCTACCGAAGTGGAATAAGAGAGAACACCAGTTGCTCTTTTGTTaGCTTGGGCTTGTGTTTCAC +
Preference number: 4 (lower is better)
Translates to: ISPQETRNPLPKWNKREHQLLFC*LGLVFH
Trigger: GTGAAACACAAGCCCAAGGCAACAAAAGAGCAACTG...GTGTTCTCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTTCTTGTGGGCTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS-3UTR GCA 90 bp ATGCAGTGGGATTTTTCCAACAGAGGTTTTTCACAGCATTCCTTCAGTTTACTGCAGTTGCTCTTTTGTTaGCTTGGGCTTGTGTTTCAC +
Preference number: 4 (lower is better)
Translates to: MQWDFSNRGFSQHSFSLLQLLFC*LGLVFH
Trigger: GTGAAACACAAGCCCAAGGCAACAAAAGAGCAACTG...CAGTAAACTGAAGGAATGCTGTGAAAAACCTCTGTTGGAAAAATCCCACTGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000476441.6
CDS-3UTR GCA 90 bp TACCGAAGTGGAATAAGAGAGAACACTGGAACTTCCACAGAACCTACAGAATTTCAGTTGCTCTTTTGTTaGCTTGGGCTTGTGTTTCAC +
Preference number: 4 (lower is better)
Translates to: YRSGIRENTGTSTEPTEFQLLFC*LGLVFH
Trigger: GTGAAACACAAGCCCAAGGCAACAAAAGAGCAACTG...AAATTCTGTAGGTTCTGTGGAAGTTCCAGTGTTCTCTCTTATTCCACTTCGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS-3UTR GCA 90 bp GCCCACAAGAAACTAGAAATCCTCTACCGAAGTGGAATAAGAGAGAACACTGGACTTCTCTACAAAAGCTaGGAAATCATCCATAACAGC +
Preference number: 4 (lower is better)
Translates to: AHKKLEILYRSGIRENTGLLYKS*EIIHNS
Trigger: GCTGTTATGGATGATTTCGCAGCTTTTGTAGAGAAG...TCCAGTGTTCTCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTTCTTGTGGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS-3UTR GCA 90 bp AAACTAGAAATCCTCTACCGAAGTGGAATAAGAGAGAACACTGGAACTTCCACACCTTATCGTCAGCCTTaGAGCACTTCTCTACAAAAG +
Preference number: 4 (lower is better)
Translates to: KLEILYRSGIRENTGTSTPYRQP*STSLQK
Trigger: CTTTTGTAGAGAAGTGCTGCAAGGCTGACGATAAGG...TGTGGAAGTTCCAGTGTTCTCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS-3UTR CCA 90 bp AAACTAGAAATCCTCTACCGAAGTGGAATAAGAGAGAACACTGGAACTTCCACATTTCACAGATATACTTaGCAAGGTCCGCCCTGTCAT +
Preference number: 4 (lower is better)
Translates to: KLEILYRSGIRENTGTSTFHRYT*QGPPCH
Trigger: ATGACAGGGCGGACCTTGCCAAGTATATCTGTGAAA...TGTGGAAGTTCCAGTGTTCTCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295897.9
CDS-3UTR CCA 90 bp TTAGCCCACAAGAAACTAGAAATCCTCTACCGAAGTGGAATAAGAGAGAACACTACTTCGGCAATGCAGTaGGATTTTTCCAACAGAGGT +
Preference number: 4 (lower is better)
Translates to: LAHKKLEILYRSGIRENTTSAMQ*DFSNRG
Trigger: ACCTCTGTTGGAAAAATCCCACTGCATTGCCGAAGT...AGTGTTCTCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTTCTTGTGGGCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295897.9
CDS-3UTR CCA 90 bp TTCTTGATTTGTCTCTCCTTCTCAGAAAGTGTGCATATATCTGCATGGAAGGTGACTTCGGCAATGCAGTaGGATTTTTCCAACAGAGGT +
Preference number: 4 (lower is better)
Translates to: FLICLSFSESVHISAWKVTSAMQ*DFSNRG
Trigger: ACCTCTGTTGGAAAAATCCCACTGCATTGCCGAAGT...CACCTTCCATGCAGATATATGCACACTTTCTGAGAAGGAGAGACAAATCAAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476441.6
CDS-3UTR CCA 90 bp CACAAGAAACTAGAAATCCTCTACCGAAGTGGAATAAGAGAGAACACTGGAACTTGGTTTCATATGTCTTaGCAAGTCTCAGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: HKKLEILYRSGIRENTGTWFHMS*QVSAAA
Trigger: TGCTGCTGCTGAGACTTGCCAAGACATATGAAACCA...AGTTCCAGTGTTCTCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTTCTTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295897.9
CDS-3UTR CCA 90 bp TGCCCACTTTTCCTAGGTTTCTTGAGACCTCTACAAGAGTTGGAGTTGACACTTACTAATAGCGCATTCTaGAATTTGTACTCTCCAAGC +
Preference number: 4 (lower is better)
Translates to: CPLFLGFLRPLQELELTLTNSAF*NLYSPS
Trigger: GCTTGGAGAGTACAAATTCCAGAATGCGCTATTAGT...AAGTGTCAACTCCAACTCTTGTAGAGGTCTCAAGAAACCTAGGAAAAGTGGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476441.6
CDS-3UTR CCA 90 bp GAAACTAGAAATCCTCTACCGAAGTGGAATAAGAGAGAACACTGGAACTTCCACCTTGGGGTACTTTCTTaGTGTAACGAACTAATAGCG +
Preference number: 4 (lower is better)
Translates to: ETRNPLPKWNKREHWNFHLGVLS*CNELIA
Trigger: CGCTATTAGTTCGTTACACCAAGAAAGTACCCCAAG...GTGGAAGTTCCAGTGTTCTCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS-3UTR CCA 90 bp ATTAGCCCACAAGAAACTAGAAATCCTCTACCGAAGTGGAATAAGAGAGAACACGACTCTGTCACTTACTaGCGTTTTCTCATGCAACAC +
Preference number: 4 (lower is better)
Translates to: ISPQETRNPLPKWNKREHDSVTY*RFLMQH
Trigger: GTGTTGCATGAGAAAACGCCAGTAAGTGACAGAGTC...GTGTTCTCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTTCTTGTGGGCTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS-3UTR CCA 90 bp TACCGAAGTGGAATAAGAGAGAACACTGGAACTTCCACAGAACCTACAGAATTTGACTCTGTCACTTACTaGCGTTTTCTCATGCAACAC +
Preference number: 4 (lower is better)
Translates to: YRSGIRENTGTSTEPTEFDSVTY*RFLMQH
Trigger: GTGTTGCATGAGAAAACGCCAGTAAGTGACAGAGTC...AAATTCTGTAGGTTCTGTGGAAGTTCCAGTGTTCTCTCTTATTCCACTTCGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS-3UTR CCA 90 bp AATCCTCTACCGAAGTGGAATAAGAGAGAACACTGGAACTTCCACAGAACCTACGTGCATATATCTGCATaGAAGGTGAATGTTTCAGCA +
Preference number: 4 (lower is better)
Translates to: NPLPKWNKREHWNFHRTYVHISA*KVNVSA
Trigger: TGCTGAAACATTCACCTTCCATGCAGATATATGCAC...GTAGGTTCTGTGGAAGTTCCAGTGTTCTCTCTTATTCCACTTCGGTAGAGGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS-3UTR TCA 90 bp TTAGCCCACAAGAAACTAGAAATCCTCTACCGAAGTGGAATAAGAGAGAACACTGTCACAATTTTCAGCTaGCTCATCAGCAACACATGT +
Preference number: 4 (lower is better)
Translates to: LAHKKLEILYRSGIRENTVTIFS*LISNTC
Trigger: ACATGTGTTGCTGATGAGTCAGCTGAAAATTGTGAC...AGTGTTCTCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTTCTTGTGGGCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS-3UTR TCA 90 bp AAACTAGAAATCCTCTACCGAAGTGGAATAAGAGAGAACACTGGAACTTCCACAGTCACAATTTTCAGCTaGCTCATCAGCAACACATGT +
Preference number: 4 (lower is better)
Translates to: KLEILYRSGIRENTGTSTVTIFS*LISNTC
Trigger: ACATGTGTTGCTGATGAGTCAGCTGAAAATTGTGAC...TGTGGAAGTTCCAGTGTTCTCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS-3UTR TCA 90 bp TACCGAAGTGGAATAAGAGAGAACACTGGAACTTCCACAGAACCTACAGAATTTGTCTCTTCATTGTCATaGAAAGCAGTGCACATCACA +
Preference number: 4 (lower is better)
Translates to: YRSGIRENTGTSTEPTEFVSSLS*KAVHIT
Trigger: TGTGATGTGCACTGCTTTTCATGACAATGAAGAGAC...AAATTCTGTAGGTTCTGTGGAAGTTCCAGTGTTCTCTCTTATTCCACTTCGGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS-3UTR GCA 90 bp TTAGCCCACAAGAAACTAGAAATCCTCTACCGAAGTGGAATAAGAGAGAACACTCAGGAAGACATCCTTTaGCTCAGCATAGTTTTTGCA +
Preference number: 4 (lower is better)
Translates to: LAHKKLEILYRSGIRENTQEDIL*LSIVFA
Trigger: TGCAAAAACTATGCTGAGGCAAAGGATGTCTTCCTG...AGTGTTCTCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTTCTTGTGGGCTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295897.9
CDS-3UTR GCA 90 bp TCTCATCATTTTCCACTTCGGCAATGCAGTGGGATTTTTCCAACAGAGGTTTTTCAGGAAGACATCCTTTaGCTCAGCATAGTTTTTGCA +
Preference number: 4 (lower is better)
Translates to: SHHFPLRQCSGIFPTEVFQEDIL*LSIVFA
Trigger: TGCAAAAACTATGCTGAGGCAAAGGATGTCTTCCTG...AAAAACCTCTGTTGGAAAAATCCCACTGCATTGCCGAAGTGGAAAATGATGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000476441.6
CDS-3UTR GCA 90 bp TTAGCCCACAAGAAACTAGAAATCCTCTACCGAAGTGGAATAAGAGAGAACACTACTGGCGTTTTCTCATaGAACACACATAACTGGTTC +
Preference number: 4 (lower is better)
Translates to: LAHKKLEILYRSGIRENTTGVFS*NTHNWF
Trigger: GAACCAGTTATGTGTGTTGCATGAGAAAACGCCAGT...AGTGTTCTCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTTCTTGTGGGCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS-3UTR GCA 90 bp ATTAGCCCACAAGAAACTAGAAATCCTCTACCGAAGTGGAATAAGAGAGAACACCCTTCTCAGAAAGTGTaGATATATCTGCATGGAAGG +
Preference number: 4 (lower is better)
Translates to: ISPQETRNPLPKWNKREHPSQKV*IYLHGR
Trigger: CCTTCCATGCAGATATATGCACACTTTCTGAGAAGG...GTGTTCTCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTTCTTGTGGGCTAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS-3UTR GCA 90 bp TACCGAAGTGGAATAAGAGAGAACACTGGAACTTCCACAGAACCTACAGAATTTATAACAGCTTTCAGTTaGTCTTTTGTTGCCTTGGGC +
Preference number: 4 (lower is better)
Translates to: YRSGIRENTGTSTEPTEFITAFS*SFVALG
Trigger: GCCCAAGGCAACAAAAGAGCAACTGAAAGCTGTTAT...AAATTCTGTAGGTTCTGTGGAAGTTCCAGTGTTCTCTCTTATTCCACTTCGGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS-3UTR GCA 90 bp ATTAGCCCACAAGAAACTAGAAATCCTCTACCGAAGTGGAATAAGAGAGAACACATAACAGCTTTCAGTTaGTCTTTTGTTGCCTTGGGC +
Preference number: 4 (lower is better)
Translates to: ISPQETRNPLPKWNKREHITAFS*SFVALG
Trigger: GCCCAAGGCAACAAAAGAGCAACTGAAAGCTGTTAT...GTGTTCTCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTTCTTGTGGGCTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS-3UTR CCA 90 bp AATAGCGCATTCTGGAATTTGTACTCTCCAAGCTGCTCAAAAAGCTCACAATTTTTTCACAGATATACTTaGCAAGGTCCGCCCTGTCAT +
Preference number: 4 (lower is better)
Translates to: NSAFWNLYSPSCSKSSQFFHRYT*QGPPCH
Trigger: ATGACAGGGCGGACCTTGCCAAGTATATCTGTGAAA...AAATTGTGAGCTTTTTGAGCAGCTTGGAGAGTACAAATTCCAGAATGCGCTATT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000476441.6
CDS-3UTR CCA 90 bp TTAGCCCACAAGAAACTAGAAATCCTCTACCGAAGTGGAATAAGAGAGAACACTCTTGGGGTACTTTCTTaGTGTAACGAACTAATAGCG +
Preference number: 4 (lower is better)
Translates to: LAHKKLEILYRSGIRENTLGVLS*CNELIA
Trigger: CGCTATTAGTTCGTTACACCAAGAAAGTACCCCAAG...AGTGTTCTCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTTCTTGTGGGCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS-3UTR CCA 90 bp TCCTTCTCAGAAAGTGTGCATATATCTGCATGGAAGGTGAATGTTTCAGCATTAGACTCTGTCACTTACTaGCGTTTTCTCATGCAACAC +
Preference number: 4 (lower is better)
Translates to: SFSESVHISAWKVNVSALDSVTY*RFLMQH
Trigger: GTGTTGCATGAGAAAACGCCAGTAAGTGACAGAGTC...TAATGCTGAAACATTCACCTTCCATGCAGATATATGCACACTTTCTGAGAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476441.6
CDS-3UTR CCA 90 bp GAAACTAGAAATCCTCTACCGAAGTGGAATAAGAGAGAACACTGGAACTTCCACGTGCATATATCTGCATaGAAGGTGAATGTTTCAGCA +
Preference number: 4 (lower is better)
Translates to: ETRNPLPKWNKREHWNFHVHISA*KVNVSA
Trigger: TGCTGAAACATTCACCTTCCATGCAGATATATGCAC...GTGGAAGTTCCAGTGTTCTCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS-3UTR CCA 90 bp ATTAGCCCACAAGAAACTAGAAATCCTCTACCGAAGTGGAATAAGAGAGAACACAATCCTCTACCGAAGTaGAATAAGAGAGAACACTGG +
Preference number: 4 (lower is better)
Translates to: ISPQETRNPLPKWNKREHNPLPK*NKREHW
Trigger: CCAGTGTTCTCTCTTATTCCACTTCGGTAGAGGATT...GTGTTCTCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTTCTTGTGGGCTAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS-3UTR TCA 90 bp TTAGCCCACAAGAAACTAGAAATCCTCTACCGAAGTGGAATAAGAGAGAACACTAAATCTTTAAACCGATaGGCAACCTCACTCTTGTGT +
Preference number: 4 (lower is better)
Translates to: LAHKKLEILYRSGIRENTKSLNR*ATSLLC
Trigger: ACACAAGAGTGAGGTTGCTCATCGGTTTAAAGATTT...AGTGTTCTCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTTCTTGTGGGCTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS-3UTR TCA 90 bp TACCGAAGTGGAATAAGAGAGAACACTGGAACTTCCACAGAACCTACAGAATTTAAATCTTTAAACCGATaGGCAACCTCACTCTTGTGT +
Preference number: 4 (lower is better)
Translates to: YRSGIRENTGTSTEPTEFKSLNR*ATSLLC
Trigger: ACACAAGAGTGAGGTTGCTCATCGGTTTAAAGATTT...AAATTCTGTAGGTTCTGTGGAAGTTCCAGTGTTCTCTCTTATTCCACTTCGGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS-3UTR TCA 90 bp AAACTAGAAATCCTCTACCGAAGTGGAATAAGAGAGAACACTGGAACTTCCACATGTTTGATTAAATTCTaGGGCTCTTCCACAAGAGGT +
Preference number: 4 (lower is better)
Translates to: KLEILYRSGIRENTGTSTCLIKF*GSSTRG
Trigger: ACCTCTTGTGGAAGAGCCTCAGAATTTAATCAAACA...TGTGGAAGTTCCAGTGTTCTCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS-3UTR TCA 90 bp GAAACTAGAAATCCTCTACCGAAGTGGAATAAGAGAGAACACTGGAACTTCCACATTCTCATGGTAGGCTaGGATGCTTTTAAATGTGAT +
Preference number: 4 (lower is better)
Translates to: ETRNPLPKWNKREHWNFHILMVG*DAFKCD
Trigger: ATCACATTTAAAAGCATCTCAGCCTACCATGAGAAT...GTGGAAGTTCCAGTGTTCTCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS-3UTR GCA 90 bp TACCGAAGTGGAATAAGAGAGAACACTGGAACTTCCACAGAACCTACAGAATTTCACGAGCTCAACAAGTaGAGTTTGTTTCTTGATTTG +
Preference number: 4 (lower is better)
Translates to: YRSGIRENTGTSTEPTEFHELNK*SLFLDL
Trigger: CAAATCAAGAAACAAACTGCACTTGTTGAGCTCGTG...AAATTCTGTAGGTTCTGTGGAAGTTCCAGTGTTCTCTCTTATTCCACTTCGGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS-3UTR GCA 90 bp GTGGGATTTTTCCAACAGAGGTTTTTCACAGCATTCCTTCAGTTTACTGGAGATCACGAGCTCAACAAGTaGAGTTTGTTTCTTGATTTG +
Preference number: 4 (lower is better)
Translates to: VGFFQQRFFTAFLQFTGDHELNK*SLFLDL
Trigger: CAAATCAAGAAACAAACTGCACTTGTTGAGCTCGTG...ATCTCCAGTAAACTGAAGGAATGCTGTGAAAAACCTCTGTTGGAAAAATCCCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000476441.6
CDS-3UTR GCA 90 bp AAACTAGAAATCCTCTACCGAAGTGGAATAAGAGAGAACACTGGAACTTCCACACACGAGCTCAACAAGTaGAGTTTGTTTCTTGATTTG +
Preference number: 4 (lower is better)
Translates to: KLEILYRSGIRENTGTSTHELNK*SLFLDL
Trigger: CAAATCAAGAAACAAACTGCACTTGTTGAGCTCGTG...TGTGGAAGTTCCAGTGTTCTCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS-3UTR GCA 90 bp AAACTAGAAATCCTCTACCGAAGTGGAATAAGAGAGAACACTGGAACTTCCACACTTCTCTACAAAAGCTaGGAAATCATCCATAACAGC +
Preference number: 4 (lower is better)
Translates to: KLEILYRSGIRENTGTSTLLYKS*EIIHNS
Trigger: GCTGTTATGGATGATTTCGCAGCTTTTGTAGAGAAG...TGTGGAAGTTCCAGTGTTCTCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS-3UTR CCA 90 bp ATTAGCCCACAAGAAACTAGAAATCCTCTACCGAAGTGGAATAAGAGAGAACACGCTTTATCAGCAGCTTaGCAACATTCTGTAAAAGCA +
Preference number: 4 (lower is better)
Translates to: ISPQETRNPLPKWNKREHALSAA*QHSVKA
Trigger: TGCTTTTACAGAATGTTGCCAAGCTGCTGATAAAGC...GTGTTCTCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTTCTTGTGGGCTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295897.9
CDS-3UTR CCA 90 bp AAACTAGAAATCCTCTACCGAAGTGGAATAAGAGAGAACACTGGAACTTCCACACTTTCTCCAAATTTTTaGAGACTGGCACACTTGAGT +
Preference number: 4 (lower is better)
Translates to: KLEILYRSGIRENTGTSTLSPNF*RLAHLS
Trigger: ACTCAAGTGTGCCAGTCTCCAAAAATTTGGAGAAAG...TGTGGAAGTTCCAGTGTTCTCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295897.9
CDS-3UTR CCA 90 bp CACAAGAAACTAGAAATCCTCTACCGAAGTGGAATAAGAGAGAACACTGGAACTGATCTGTCACTAACTTaGAAACTTCTGCAAACTCAG +
Preference number: 4 (lower is better)
Translates to: HKKLEILYRSGIRENTGTDLSLT*KLLQTQ
Trigger: CTGAGTTTGCAGAAGTTTCCAAGTTAGTGACAGATC...AGTTCCAGTGTTCTCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTTCTTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295897.9
CDS-3UTR CCA 90 bp TACCGAAGTGGAATAAGAGAGAACACTGGAACTTCCACAGAACCTACAGAATTTACTAATAGCGCATTCTaGAATTTGTACTCTCCAAGC +
Preference number: 4 (lower is better)
Translates to: YRSGIRENTGTSTEPTEFTNSAF*NLYSPS
Trigger: GCTTGGAGAGTACAAATTCCAGAATGCGCTATTAGT...AAATTCTGTAGGTTCTGTGGAAGTTCCAGTGTTCTCTCTTATTCCACTTCGGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS-3UTR CCA 90 bp ATTAGCCCACAAGAAACTAGAAATCCTCTACCGAAGTGGAATAAGAGAGAACACACTAATAGCGCATTCTaGAATTTGTACTCTCCAAGC +
Preference number: 4 (lower is better)
Translates to: ISPQETRNPLPKWNKREHTNSAF*NLYSPS
Trigger: GCTTGGAGAGTACAAATTCCAGAATGCGCTATTAGT...GTGTTCTCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTTCTTGTGGGCTAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS-3UTR CCA 90 bp CACAAGAAACTAGAAATCCTCTACCGAAGTGGAATAAGAGAGAACACTGGAACTAATAAGAGAGAACACTaGAACTTCCACAGAACCTAC +
Preference number: 4 (lower is better)
Translates to: HKKLEILYRSGIRENTGTNKREH*NFHRTY
Trigger: GTAGGTTCTGTGGAAGTTCCAGTGTTCTCTCTTATT...AGTTCCAGTGTTCTCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTTCTTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS-3UTR TCA 90 bp ATTAGCCCACAAGAAACTAGAAATCCTCTACCGAAGTGGAATAAGAGAGAACACATTCTCATGGTAGGCTaGGATGCTTTTAAATGTGAT +
Preference number: 4 (lower is better)
Translates to: ISPQETRNPLPKWNKREHILMVG*DAFKCD
Trigger: ATCACATTTAAAAGCATCTCAGCCTACCATGAGAAT...GTGTTCTCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTTCTTGTGGGCTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS-3UTR GCA 90 bp GAAACTAGAAATCCTCTACCGAAGTGGAATAAGAGAGAACACTGGAACTTCCACTTGTCATCTTTGTGTTaGAAGAAGCATTCATTTCTC +
Preference number: 4 (lower is better)
Translates to: ETRNPLPKWNKREHWNFHLSSLC*KKHSFL
Trigger: GAGAAATGAATGCTTCTTGCAACACAAAGATGACAA...GTGGAAGTTCCAGTGTTCTCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS-3UTR GCA 90 bp ATTAGCCCACAAGAAACTAGAAATCCTCTACCGAAGTGGAATAAGAGAGAACACATTCATACAAAAACATaGCCAGGAAGACATCCTTTG +
Preference number: 4 (lower is better)
Translates to: ISPQETRNPLPKWNKREHIHTKT*PGRHPL
Trigger: CAAAGGATGTCTTCCTGGGCATGTTTTTGTATGAAT...GTGTTCTCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTTCTTGTGGGCTAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295897.9
CDS-3UTR GCA 90 bp TTAGCCCACAAGAAACTAGAAATCCTCTACCGAAGTGGAATAAGAGAGAACACTTTGTACTCTCCAAGCTaGTCAAAAAGCTCACAATTT +
Preference number: 4 (lower is better)
Translates to: LAHKKLEILYRSGIRENTLYSPS*SKSSQF
Trigger: AAATTGTGAGCTTTTTGAGCAGCTTGGAGAGTACAA...AGTGTTCTCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTTCTTGTGGGCTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS-3UTR CCA 90 bp ATTAGCCCACAAGAAACTAGAAATCCTCTACCGAAGTGGAATAAGAGAGAACACTACATGATCTTCAAATaGACACTGCTGAAGATACTG +
Preference number: 4 (lower is better)
Translates to: ISPQETRNPLPKWNKREHYMIFK*TLLKIL
Trigger: CAGTATCTTCAGCAGTGTCCATTTGAAGATCATGTA...GTGTTCTCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTTCTTGTGGGCTAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS-3UTR CCA 90 bp TATTTAATTAGCCCACAAGAAACTAGAAATCCTCTACCGAAGTGGAATAAGAGATGCAACACACATAACTaGTTCAGGACCACGGATAGA +
Preference number: 4 (lower is better)
Translates to: YLISPQETRNPLPKWNKRCNTHN*FRTTDR
Trigger: TCTATCCGTGGTCCTGAACCAGTTATGTGTGTTGCA...TCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTTCTTGTGGGCTAATTAAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS-3UTR GCA 90 bp AAACTAGAAATCCTCTACCGAAGTGGAATAAGAGAGAACACTGGAACTTCCACATTGTCATCTTTGTGTTaGAAGAAGCATTCATTTCTC +
Preference number: 4 (lower is better)
Translates to: KLEILYRSGIRENTGTSTLSSLC*KKHSFL
Trigger: GAGAAATGAATGCTTCTTGCAACACAAAGATGACAA...TGTGGAAGTTCCAGTGTTCTCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS-3UTR GCA 90 bp TATTTAATTAGCCCACAAGAAACTAGAAATCCTCTACCGAAGTGGAATAAGAGACCTTCTCAGAAAGTGTaGATATATCTGCATGGAAGG +
Preference number: 4 (lower is better)
Translates to: YLISPQETRNPLPKWNKRPSQKV*IYLHGR
Trigger: CCTTCCATGCAGATATATGCACACTTTCTGAGAAGG...TCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTTCTTGTGGGCTAATTAAATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS-3UTR GCA 90 bp TATTTAATTAGCCCACAAGAAACTAGAAATCCTCTACCGAAGTGGAATAAGAGAGTTTACAACATTTGCTaGCCACTTTTCCTAGGTTTC +
Preference number: 4 (lower is better)
Translates to: YLISPQETRNPLPKWNKRVYNIC*PLFLGF
Trigger: GAAACCTAGGAAAAGTGGGCAGCAAATGTTGTAAAC...TCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTTCTTGTGGGCTAATTAAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS-3UTR CCA 90 bp TATTTAATTAGCCCACAAGAAACTAGAAATCCTCTACCGAAGTGGAATAAGAGAAATAAGAGAGAACACTaGAACTTCCACAGAACCTAC +
Preference number: 4 (lower is better)
Translates to: YLISPQETRNPLPKWNKRNKREH*NFHRTY
Trigger: GTAGGTTCTGTGGAAGTTCCAGTGTTCTCTCTTATT...TCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTTCTTGTGGGCTAATTAAATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS-3UTR GCA 90 bp TATTTAATTAGCCCACAAGAAACTAGAAATCCTCTACCGAAGTGGAATAAGAGATTGTACTCTCCAAGCTaGTCAAAAAGCTCACAATTT +
Preference number: 4 (lower is better)
Translates to: YLISPQETRNPLPKWNKRLYSPS*SKSSQF
Trigger: AAATTGTGAGCTTTTTGAGCAGCTTGGAGAGTACAA...TCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTTCTTGTGGGCTAATTAAATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS-3UTR CCA 90 bp TATTTAATTAGCCCACAAGAAACTAGAAATCCTCTACCGAAGTGGAATAAGAGATACATGATCTTCAAATaGACACTGCTGAAGATACTG +
Preference number: 4 (lower is better)
Translates to: YLISPQETRNPLPKWNKRYMIFK*TLLKIL
Trigger: CAGTATCTTCAGCAGTGTCCATTTGAAGATCATGTA...TCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTTCTTGTGGGCTAATTAAATA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS-3UTR CAA 90 bp GCGGCACAGCACTTCTCTAGAGTGGTTTCATATGTCTTGGCAAGTCTCAGCAGCAGGTTACCCACTTCATaGTGCCAAAGGCGTGTGGGG +
Preference number: 5 (lower is better)
Translates to: AAQHFSRVVSYVLASLSSRLPTS*CQRRVG
Trigger: CCCCACACGCCTTTGGCACAATGAAGTGGGTAACCT...GCTGCTGAGACTTGCCAAGACATATGAAACCACTCTAGAGAAGTGCTGTGCCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476441.6
CDS-3UTR CAA 90 bp TATACTTGGCAAGGTCCGCCCTGTCATCAGCACATTCAAGCAGATCTCCATGGCTCTGCAAACTCAGCTTaGGGAAATCTCTGGCTCAGG +
Preference number: 5 (lower is better)
Translates to: YTWQGPPCHQHIQADLHGSANSA*GNLWLR
Trigger: CCTGAGCCAGAGATTTCCCAAAGCTGAGTTTGCAGA...GCCATGGAGATCTGCTTGAATGTGCTGATGACAGGGCGGACCTTGCCAAGTATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476441.6
CDS-3UTR CAA 90 bp CAGCTAATGAAGGCAAGTCAGCAGGCATCTCATCATTTTCCACTTCGGCAATGCTGGAGACTGGCACACTaGAGTCTCTGTTTGGCAGAC +
Preference number: 5 (lower is better)
Translates to: QLMKASQQASHHFPLRQCWRLAH*SLCLAD
Trigger: GTCTGCCAAACAGAGACTCAAGTGTGCCAGTCTCCA...GCATTGCCGAAGTGGAAAATGATGAGATGCCTGCTGACTTGCCTTCATTAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476441.6
CDS-3UTR CAA 90 bp TTTTACCCTCCTCGGCAAAGCAGGTCTCCTTATCGTCAGCCTTGCAGCACTTCTTTTTCACAGATATACTaGGCAAGGTCCGCCCTGTCA +
Preference number: 5 (lower is better)
Translates to: FYPPRQSRSPYRQPCSTSFSQIY*ARSALS
Trigger: TGACAGGGCGGACCTTGCCAAGTATATCTGTGAAAA...AGAAGTGCTGCAAGGCTGACGATAAGGAGACCTGCTTTGCCGAGGAGGGTAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476441.6
CDS-3UTR CAA 90 bp TTTTACCCTCCTCGGCAAAGCAGGTCTCCTTATCGTCAGCCTTGCAGCACTTCTTTTGTTGCCTTGGGCTaGTGTTTCACGAGCTCAACA +
Preference number: 5 (lower is better)
Translates to: FYPPRQSRSPYRQPCSTSFVALG*CFTSST
Trigger: TGTTGAGCTCGTGAAACACAAGCCCAAGGCAACAAA...AGAAGTGCTGCAAGGCTGACGATAAGGAGACCTGCTTTGCCGAGGAGGGTAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476441.6
CDS CCA 90 bp AGGCGAGCTACTGCCCATGCTTTGAAAGCTCTTTCTCCAAATTTTTaGAGACTGGCACACTTGAGTCTCTGTTTGGCAGACGAAGCCTTC +
Preference number: 5 (lower is better)
Translates to: RRATAHALKALSPNF*RLAHLSLCLADEAF
Trigger: GAAGGCTTCGTCTGCCAAACAGAGACTCAAGTGTGCCAGTCTCCAAAAATTTGGAGAAAGAGCTTTCAAAGCATGGGCAGTAGCTCGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000295897.9
ENST00000401494.7
ENST00000476441.6
ENST00000503124.5
ENST00000505649.5
ENST00000509063.5
ENST00000511370.1
CDS-3UTR CAA 90 bp GGTCTCCTTATCGTCAGCCTTGCAGCACTTCTCTACAAAAGCTGCGAAATCATCGTGGTTTCATATGTCTaGGCAAGTCTCAGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: GLLIVSLAALLYKSCEIIVVSYV*ASLSSS
Trigger: GCTGCTGCTGAGACTTGCCAAGACATATGAAACCAC...GATGATTTCGCAGCTTTTGTAGAGAAGTGCTGCAAGGCTGACGATAAGGAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476441.6
CDS-3UTR CAA 90 bp TTTTACCCTCCTCGGCAAAGCAGGTCTCCTTATCGTCAGCCTTGCAGCACTTCTCTTTCAGTTGCTCTTTaGTTGCCTTGGGCTTGTGTT +
Preference number: 5 (lower is better)
Translates to: FYPPRQSRSPYRQPCSTSLSVAL*LPWACV
Trigger: AACACAAGCCCAAGGCAACAAAAGAGCAACTGAAAG...AGAAGTGCTGCAAGGCTGACGATAAGGAGACCTGCTTTGCCGAGGAGGGTAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476441.6
CDS GCA 90 bp TCTGTGCAGCATTTGGTGACTCTGTCACTTACTGGCGTTTTCTCATaGAACACACATAACTGGTTCAGGACCACGGATAGGCATTCTGGA +
Preference number: 5 (lower is better)
Translates to: SVQHLVTLSLTGVFS*NTHNWFRTTDRHSG
Trigger: TCCAGAATGCCTATCCGTGGTCCTGAACCAGTTATGTGTGTTGCATGAGAAAACGCCAGTAAGTGACAGAGTCACCAAATGCTGCACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505649.5
CDS CCA 90 bp AGTGCACATCACATCAACCTCTGGTCTCACCAATCGGGGGAGGTTTaGGTTGTCATCTTTGTGTTGCAAGAAGCATTCATTTCTCTCAGG +
Preference number: 5 (lower is better)
Translates to: SAHHINLWSHQSGEV*VVIFVLQEAFISLR
Trigger: CCTGAGAGAAATGAATGCTTCTTGCAACACAAAGATGACAACCCAAACCTCCCCCGATTGGTGAGACCAGAGGTTGATGTGATGTGCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000295897.9
ENST00000441319.5
ENST00000505649.5
ENST00000509063.5
ENST00000510166.5
ENST00000514786.1
ENST00000515133.5
ENST00000621085.4
ENST00000621628.4
CDS CCA 90 bp CGACGACTCTTTACCCTGTCATCAGCACATTCAAGCAGATCTCCATaGCAGCATTCCGTGTGGACTTTGGTAAGATCTGTCACTAACTTG +
Preference number: 5 (lower is better)
Translates to: RRLFTLSSAHSSRSP*QHSVWTLVRSVTNL
Trigger: CAAGTTAGTGACAGATCTTACCAAAGTCCACACGGAATGCTGCCATGGAGATCTGCTTGAATGTGCTGATGACAGGGTAAAGAGTCGTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507673.1
CDS-3UTR CAA 90 bp GCCCACAAGAAACTAGAAATCCTCTACCGAAGTGGAATAAGAGAGAACACTGGACGGGGGAGGTTTGGGTaGTCATCTTTGTGTTGCAAG +
Preference number: 5 (lower is better)
Translates to: AHKKLEILYRSGIRENTGRGRFG*SSLCCK
Trigger: CTTGCAACACAAAGATGACAACCCAAACCTCCCCCG...TCCAGTGTTCTCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTTCTTGTGGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS-3UTR CAA 90 bp CAGATATACTTGGCAAGGTCCGCCCTGTCATCAGCACATTCAAGCAGATCTCCACATTCCGTGTGGACTTaGGTAAGATCTGTCACTAAC +
Preference number: 5 (lower is better)
Translates to: QIYLARSALSSAHSSRSPHSVWT*VRSVTN
Trigger: GTTAGTGACAGATCTTACCAAAGTCCACACGGAATG...TGGAGATCTGCTTGAATGTGCTGATGACAGGGCGGACCTTGCCAAGTATATCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476441.6
CDS-3UTR CAA 90 bp AGCACTTCTCTAGAGTGGTTTCATATGTCTTGGCAAGTCTCAGCAGCAGCACGACCAGGAAGACATCCTTaGCCTCAGCATAGTTTTTGC +
Preference number: 5 (lower is better)
Translates to: STSLEWFHMSWQVSAAARPGRHP*PQHSFC
Trigger: GCAAAAACTATGCTGAGGCAAAGGATGTCTTCCTGG...TCGTGCTGCTGCTGAGACTTGCCAAGACATATGAAACCACTCTAGAGAAGTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476441.6
CDS-3UTR CAA 90 bp GGCAAGTCAGCAGGCATCTCATCATTTTCCACTTCGGCAATGCAGTGGGATTTTAGACCTCTACAAGAGTaGGAGTTGACACTTGGGGTA +
Preference number: 5 (lower is better)
Translates to: GKSAGISSFSTSAMQWDFRPLQE*ELTLGV
Trigger: TACCCCAAGTGTCAACTCCAACTCTTGTAGAGGTCT...AAAATCCCACTGCATTGCCGAAGTGGAAAATGATGAGATGCCTGCTGACTTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000476441.6
CDS CCA 90 bp TGTCTCTTCATTGTCATGAAAAGCAGTGCACATCACATCAACCTCTaGTCTCACCAATCGGGGGAGGTTTGGGTTGTCATCTTTGTGTTG +
Preference number: 5 (lower is better)
Translates to: CLFIVMKSSAHHINL*SHQSGEVWVVIFVL
Trigger: CAACACAAAGATGACAACCCAAACCTCCCCCGATTGGTGAGACCAGAGGTTGATGTGATGTGCACTGCTTTTCATGACAATGAAGAGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000295897.9
ENST00000441319.5
ENST00000505649.5
ENST00000509063.5
ENST00000510166.5
ENST00000514786.1
ENST00000515133.5
ENST00000621085.4
ENST00000621628.4
CDS-3UTR CAA 90 bp CACAAGAAACTAGAAATCCTCTACCGAAGTGGAATAAGAGAGAACACTGGAACTAGGTTACCCACTTCATaGTGCCAAAGGCGTGTGGGG +
Preference number: 5 (lower is better)
Translates to: HKKLEILYRSGIRENTGTRLPTS*CQRRVG
Trigger: CCCCACACGCCTTTGGCACAATGAAGTGGGTAACCT...AGTTCCAGTGTTCTCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTTCTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS-3UTR CAA 90 bp AAACTAGAAATCCTCTACCGAAGTGGAATAAGAGAGAACACTGGAACTTCCACAAGGTTACCCACTTCATaGTGCCAAAGGCGTGTGGGG +
Preference number: 5 (lower is better)
Translates to: KLEILYRSGIRENTGTSTRLPTS*CQRRVG
Trigger: CCCCACACGCCTTTGGCACAATGAAGTGGGTAACCT...TGTGGAAGTTCCAGTGTTCTCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS-3UTR CAA 90 bp CAGCGGCACAGCACTTCTCTAGAGTGGTTTCATATGTCTTGGCAAGTCTCAGCAAGCTTTATCAGCAGCTaGGCAACATTCTGTAAAAGC +
Preference number: 5 (lower is better)
Translates to: QRHSTSLEWFHMSWQVSASFISS*ATFCKS
Trigger: GCTTTTACAGAATGTTGCCAAGCTGCTGATAAAGCT...TGCTGAGACTTGCCAAGACATATGAAACCACTCTAGAGAAGTGCTGTGCCGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476441.6
CDS-3UTR CAA 90 bp ACATCCTTACTTTCAACAAAATCAGCAGCTAATGAAGGCAAGTCAGCAGGCATCGAAGTTCATCGAGCTTaGGCAACAGGCAGGCAGCTT +
Preference number: 5 (lower is better)
Translates to: TSLLSTKSAANEGKSAGIEVHRA*ATGRQL
Trigger: AAGCTGCCTGCCTGTTGCCAAAGCTCGATGAACTTC...GATGCCTGCTGACTTGCCTTCATTAGCTGCTGATTTTGTTGAAAGTAAGGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476441.6
CDS-3UTR CAA 90 bp CCATGGCAGCATTCCGTGTGGACTTTGGTAAGATCTGTCACTAACTTGGAAACTAGCGCATTCTGGAATTaGTACTCTCCAAGCTGCTCA +
Preference number: 5 (lower is better)
Translates to: PWQHSVWTLVRSVTNLETSAFWN*YSPSCS
Trigger: TGAGCAGCTTGGAGAGTACAAATTCCAGAATGCGCT...AGTTTCCAAGTTAGTGACAGATCTTACCAAAGTCCACACGGAATGCTGCCATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476441.6
CDS-3UTR CAA 90 bp AGCACTTCTCTAGAGTGGTTTCATATGTCTTGGCAAGTCTCAGCAGCAGCACGACTACAAGAGTTGGAGTaGACACTTGGGGTACTTTCT +
Preference number: 5 (lower is better)
Translates to: STSLEWFHMSWQVSAAARLQELE*TLGVLS
Trigger: AGAAAGTACCCCAAGTGTCAACTCCAACTCTTGTAG...TCGTGCTGCTGCTGAGACTTGCCAAGACATATGAAACCACTCTAGAGAAGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476441.6
CDS-3UTR CAA 90 bp TTTTACCCTCCTCGGCAAAGCAGGTCTCCTTATCGTCAGCCTTGCAGCACTTCTCTCAACAAGTGCAGTTaGTTTCTTGATTTGTCTCTC +
Preference number: 5 (lower is better)
Translates to: FYPPRQSRSPYRQPCSTSLNKCS*FLDLSL
Trigger: GAGAGACAAATCAAGAAACAAACTGCACTTGTTGAG...AGAAGTGCTGCAAGGCTGACGATAAGGAGACCTGCTTTGCCGAGGAGGGTAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476441.6
CDS-3UTR CAA 90 bp AAACTAGAAATCCTCTACCGAAGTGGAATAAGAGAGAACACTGGAACTTCCACACGGGGGAGGTTTGGGTaGTCATCTTTGTGTTGCAAG +
Preference number: 5 (lower is better)
Translates to: KLEILYRSGIRENTGTSTRGRFG*SSLCCK
Trigger: CTTGCAACACAAAGATGACAACCCAAACCTCCCCCG...TGTGGAAGTTCCAGTGTTCTCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS-3UTR CAA 90 bp TCATCAGCACATTCAAGCAGATCTCCATGGCAGCATTCCGTGTGGACTTTGGTATCTTTCTCCAAATTTTaGGAGACTGGCACACTTGAG +
Preference number: 5 (lower is better)
Translates to: SSAHSSRSPWQHSVWTLVSFSKF*ETGTLE
Trigger: CTCAAGTGTGCCAGTCTCCAAAAATTTGGAGAAAGA...TACCAAAGTCCACACGGAATGCTGCCATGGAGATCTGCTTGAATGTGCTGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476441.6
CDS-3UTR CAA 90 bp GCCCACAAGAAACTAGAAATCCTCTACCGAAGTGGAATAAGAGAGAACACTGGAAGACCTCTACAAGAGTaGGAGTTGACACTTGGGGTA +
Preference number: 5 (lower is better)
Translates to: AHKKLEILYRSGIRENTGRPLQE*ELTLGV
Trigger: TACCCCAAGTGTCAACTCCAACTCTTGTAGAGGTCT...TCCAGTGTTCTCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTTCTTGTGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS-3UTR CAA 90 bp CAGATATACTTGGCAAGGTCCGCCCTGTCATCAGCACATTCAAGCAGATCTCCATCAGCATTAAACTCTTaGGGAACGTATGTTTCATCG +
Preference number: 5 (lower is better)
Translates to: QIYLARSALSSAHSSRSPSALNS*GTYVSS
Trigger: CGATGAAACATACGTTCCCAAAGAGTTTAATGCTGA...TGGAGATCTGCTTGAATGTGCTGATGACAGGGCGGACCTTGCCAAGTATATCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476441.6
CDS-3UTR CAA 90 bp AATCCTCTACCGAAGTGGAATAAGAGAGAACACTGGAACTTCCACAGAACCTACTTTGTTGCCTTGGGCTaGTGTTTCACGAGCTCAACA +
Preference number: 5 (lower is better)
Translates to: NPLPKWNKREHWNFHRTYFVALG*CFTSST
Trigger: TGTTGAGCTCGTGAAACACAAGCCCAAGGCAACAAA...GTAGGTTCTGTGGAAGTTCCAGTGTTCTCTCTTATTCCACTTCGGTAGAGGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS-3UTR CAA 90 bp GCCCACAAGAAACTAGAAATCCTCTACCGAAGTGGAATAAGAGAGAACACTGGAATTTCTCTCAGGTTCTaGTTTTGCACAGCAGTCAGC +
Preference number: 5 (lower is better)
Translates to: AHKKLEILYRSGIRENTGISLRF*FCTAVS
Trigger: GCTGACTGCTGTGCAAAACAAGAACCTGAGAGAAAT...TCCAGTGTTCTCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTTCTTGTGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS-3UTR CAA 90 bp AAACTAGAAATCCTCTACCGAAGTGGAATAAGAGAGAACACTGGAACTTCCACACCAATCGGGGGAGGTTaGGGTTGTCATCTTTGTGTT +
Preference number: 5 (lower is better)
Translates to: KLEILYRSGIRENTGTSTPIGGG*GCHLCV
Trigger: AACACAAAGATGACAACCCAAACCTCCCCCGATTGG...TGTGGAAGTTCCAGTGTTCTCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS-3UTR CAA 90 bp ATTAGCCCACAAGAAACTAGAAATCCTCTACCGAAGTGGAATAAGAGAGAACACTCTGCAAACTCAGCTTaGGGAAATCTCTGGCTCAGG +
Preference number: 5 (lower is better)
Translates to: ISPQETRNPLPKWNKREHSANSA*GNLWLR
Trigger: CCTGAGCCAGAGATTTCCCAAAGCTGAGTTTGCAGA...GTGTTCTCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTTCTTGTGGGCTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295897.9
CDS-3UTR CAA 90 bp AATCCTCTACCGAAGTGGAATAAGAGAGAACACTGGAACTTCCACAGAACCTACGATTCTGTGCAGCATTaGGTGACTCTGTCACTTACT +
Preference number: 5 (lower is better)
Translates to: NPLPKWNKREHWNFHRTYDSVQH*VTLSLT
Trigger: AGTAAGTGACAGAGTCACCAAATGCTGCACAGAATC...GTAGGTTCTGTGGAAGTTCCAGTGTTCTCTCTTATTCCACTTCGGTAGAGGATT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS-3UTR CAA 90 bp TCATCAGCACATTCAAGCAGATCTCCATGGCAGCATTCCGTGTGGACTTTGGTAAGTGCAGTTTGTTTCTaGATTTGTCTCTCCTTCTCA +
Preference number: 5 (lower is better)
Translates to: SSAHSSRSPWQHSVWTLVSAVCF*ICLSFS
Trigger: TGAGAAGGAGAGACAAATCAAGAAACAAACTGCACT...TACCAAAGTCCACACGGAATGCTGCCATGGAGATCTGCTTGAATGTGCTGATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476441.6
CDS-3UTR CAA 90 bp CACAAGAAACTAGAAATCCTCTACCGAAGTGGAATAAGAGAGAACACTGGAACTTGCTCTTTTGTTGCCTaGGGCTTGTGTTTCACGAGC +
Preference number: 5 (lower is better)
Translates to: HKKLEILYRSGIRENTGTCSFVA*GLCFTS
Trigger: GCTCGTGAAACACAAGCCCAAGGCAACAAAAGAGCA...AGTTCCAGTGTTCTCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTTCTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS-3UTR CAA 90 bp TTCTTGATTTGTCTCTCCTTCTCAGAAAGTGTGCATATATCTGCATGGAAGGTGTGCTCTTTTGTTGCCTaGGGCTTGTGTTTCACGAGC +
Preference number: 5 (lower is better)
Translates to: FLICLSFSESVHISAWKVCSFVA*GLCFTS
Trigger: GCTCGTGAAACACAAGCCCAAGGCAACAAAAGAGCA...CACCTTCCATGCAGATATATGCACACTTTCTGAGAAGGAGAGACAAATCAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476441.6
CDS-3UTR CAA 90 bp AAACTAGAAATCCTCTACCGAAGTGGAATAAGAGAGAACACTGGAACTTCCACATGCTCTTTTGTTGCCTaGGGCTTGTGTTTCACGAGC +
Preference number: 5 (lower is better)
Translates to: KLEILYRSGIRENTGTSTCSFVA*GLCFTS
Trigger: GCTCGTGAAACACAAGCCCAAGGCAACAAAAGAGCA...TGTGGAAGTTCCAGTGTTCTCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS-3UTR CAA 90 bp AATCCTCTACCGAAGTGGAATAAGAGAGAACACTGGAACTTCCACAGAACCTACCTTTCAGTTGCTCTTTaGTTGCCTTGGGCTTGTGTT +
Preference number: 5 (lower is better)
Translates to: NPLPKWNKREHWNFHRTYLSVAL*LPWACV
Trigger: AACACAAGCCCAAGGCAACAAAAGAGCAACTGAAAG...GTAGGTTCTGTGGAAGTTCCAGTGTTCTCTCTTATTCCACTTCGGTAGAGGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS-3UTR CAA 90 bp AATCCTCTACCGAAGTGGAATAAGAGAGAACACTGGAACTTCCACAGAACCTACCATAACAGCTTTCAGTaGCTCTTTTGTTGCCTTGGG +
Preference number: 5 (lower is better)
Translates to: NPLPKWNKREHWNFHRTYHNSFQ*LFCCLG
Trigger: CCCAAGGCAACAAAAGAGCAACTGAAAGCTGTTATG...GTAGGTTCTGTGGAAGTTCCAGTGTTCTCTCTTATTCCACTTCGGTAGAGGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS-3UTR CAA 90 bp GCGTTTTCTCATGCAACACACATAACTGGTTCAGGACCACGGATAGATAGTCTTTCCTTATCGTCAGCCTaGCAGCACTTCTCTACAAAA +
Preference number: 5 (lower is better)
Translates to: AFSHATHITGSGPRIDSLSLSSA*QHFSTK
Trigger: TTTTGTAGAGAAGTGCTGCAAGGCTGACGATAAGGA...AAGACTATCTATCCGTGGTCCTGAACCAGTTATGTGTGTTGCATGAGAAAACGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476441.6
CDS-3UTR CAA 90 bp AAACTAGAAATCCTCTACCGAAGTGGAATAAGAGAGAACACTGGAACTTCCACATTTTCACAGATATACTaGGCAAGGTCCGCCCTGTCA +
Preference number: 5 (lower is better)
Translates to: KLEILYRSGIRENTGTSTFSQIY*ARSALS
Trigger: TGACAGGGCGGACCTTGCCAAGTATATCTGTGAAAA...TGTGGAAGTTCCAGTGTTCTCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295897.9
CDS-3UTR CAA 90 bp TTAGCCCACAAGAAACTAGAAATCCTCTACCGAAGTGGAATAAGAGAGAACACTCCAGGAAGACATCCTTaGCCTCAGCATAGTTTTTGC +
Preference number: 5 (lower is better)
Translates to: LAHKKLEILYRSGIRENTPGRHP*PQHSFC
Trigger: GCAAAAACTATGCTGAGGCAAAGGATGTCTTCCTGG...AGTGTTCTCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTTCTTGTGGGCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295897.9
CDS-3UTR CAA 90 bp TACCGAAGTGGAATAAGAGAGAACACTGGAACTTCCACAGAACCTACAGAATTTAGCGCATTCTGGAATTaGTACTCTCCAAGCTGCTCA +
Preference number: 5 (lower is better)
Translates to: YRSGIRENTGTSTEPTEFSAFWN*YSPSCS
Trigger: TGAGCAGCTTGGAGAGTACAAATTCCAGAATGCGCT...AAATTCTGTAGGTTCTGTGGAAGTTCCAGTGTTCTCTCTTATTCCACTTCGGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS-3UTR CAA 90 bp AAACTAGAAATCCTCTACCGAAGTGGAATAAGAGAGAACACTGGAACTTCCACAAGCGCATTCTGGAATTaGTACTCTCCAAGCTGCTCA +
Preference number: 5 (lower is better)
Translates to: KLEILYRSGIRENTGTSTSAFWN*YSPSCS
Trigger: TGAGCAGCTTGGAGAGTACAAATTCCAGAATGCGCT...TGTGGAAGTTCCAGTGTTCTCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS-3UTR CAA 90 bp GCCCACAAGAAACTAGAAATCCTCTACCGAAGTGGAATAAGAGAGAACACTGGACTTTTCCTAGGTTTCTaGAGACCTCTACAAGAGTTG +
Preference number: 5 (lower is better)
Translates to: AHKKLEILYRSGIRENTGLFLGF*RPLQEL
Trigger: CAACTCTTGTAGAGGTCTCAAGAAACCTAGGAAAAG...TCCAGTGTTCTCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTTCTTGTGGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS-3UTR CAA 90 bp TTAGCCCACAAGAAACTAGAAATCCTCTACCGAAGTGGAATAAGAGAGAACACTTTTGTTGCCTTGGGCTaGTGTTTCACGAGCTCAACA +
Preference number: 5 (lower is better)
Translates to: LAHKKLEILYRSGIRENTFVALG*CFTSST
Trigger: TGTTGAGCTCGTGAAACACAAGCCCAAGGCAACAAA...AGTGTTCTCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTTCTTGTGGGCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS GCA 90 bp ACTTTGGGGCTCAGGCATACCGCTATAAGTCTCAATATTCTCATCTaGATGATGAGGATAATAAAATCCACTTTCATGGAGTTGGTGGGA +
Preference number: 5 (lower is better)
Translates to: TLGLRHTAISLNILI*MMRIIKSTFMELVG
Trigger: TCCCACCAACTCCATGAAAGTGGATTTTATTATCCTCATCATGCAGATGAGAATATTGAGACTTATAGCGGTATGCCTGAGCCCCAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508932.5
CDS-3UTR CAA 90 bp GCCCACAAGAAACTAGAAATCCTCTACCGAAGTGGAATAAGAGAGAACACTGGAAGGTTTCACGAAGAGTaGCAACTGTGCATAATTTGT +
Preference number: 5 (lower is better)
Translates to: AHKKLEILYRSGIRENTGRFHEE*QLCIIC
Trigger: ACAAATTATGCACAGTTGCAACTCTTCGTGAAACCT...TCCAGTGTTCTCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTTCTTGTGGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS-3UTR CAA 90 bp TACCGAAGTGGAATAAGAGAGAACACTGGAACTTCCACAGAACCTACAGAATTTTCTCAGGTTCTTGTTTaGCACAGCAGTCAGCCATTT +
Preference number: 5 (lower is better)
Translates to: YRSGIRENTGTSTEPTEFSQVLV*HSSQPF
Trigger: AAATGGCTGACTGCTGTGCAAAACAAGAACCTGAGA...AAATTCTGTAGGTTCTGTGGAAGTTCCAGTGTTCTCTCTTATTCCACTTCGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS-3UTR CAA 90 bp TATTTAATTAGCCCACAAGAAACTAGAAATCCTCTACCGAAGTGGAATAAGAGAGAAGTTCATCGAGCTTaGGCAACAGGCAGGCAGCTT +
Preference number: 5 (lower is better)
Translates to: YLISPQETRNPLPKWNKREVHRA*ATGRQL
Trigger: AAGCTGCCTGCCTGTTGCCAAAGCTCGATGAACTTC...TCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTTCTTGTGGGCTAATTAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295897.9
CDS-3UTR CAA 90 bp TATTTAATTAGCCCACAAGAAACTAGAAATCCTCTACCGAAGTGGAATAAGAGATGGAGACTGGCACACTaGAGTCTCTGTTTGGCAGAC +
Preference number: 5 (lower is better)
Translates to: YLISPQETRNPLPKWNKRWRLAH*SLCLAD
Trigger: GTCTGCCAAACAGAGACTCAAGTGTGCCAGTCTCCA...TCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTTCTTGTGGGCTAATTAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295897.9
CDS-3UTR CAA 90 bp AAACTAGAAATCCTCTACCGAAGTGGAATAAGAGAGAACACTGGAACTTCCACACATTCCGTGTGGACTTaGGTAAGATCTGTCACTAAC +
Preference number: 5 (lower is better)
Translates to: KLEILYRSGIRENTGTSTHSVWT*VRSVTN
Trigger: GTTAGTGACAGATCTTACCAAAGTCCACACGGAATG...TGTGGAAGTTCCAGTGTTCTCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295897.9
CDS-3UTR CAA 90 bp AAACTAGAAATCCTCTACCGAAGTGGAATAAGAGAGAACACTGGAACTTCCACACTACAAGAGTTGGAGTaGACACTTGGGGTACTTTCT +
Preference number: 5 (lower is better)
Translates to: KLEILYRSGIRENTGTSTLQELE*TLGVLS
Trigger: AGAAAGTACCCCAAGTGTCAACTCCAACTCTTGTAG...TGTGGAAGTTCCAGTGTTCTCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS-3UTR CAA 90 bp TTCTTGATTTGTCTCTCCTTCTCAGAAAGTGTGCATATATCTGCATGGAAGGTGGATTCTGTGCAGCATTaGGTGACTCTGTCACTTACT +
Preference number: 5 (lower is better)
Translates to: FLICLSFSESVHISAWKVDSVQH*VTLSLT
Trigger: AGTAAGTGACAGAGTCACCAAATGCTGCACAGAATC...CACCTTCCATGCAGATATATGCACACTTTCTGAGAAGGAGAGACAAATCAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476441.6
CDS-3UTR CAA 90 bp AATCCTCTACCGAAGTGGAATAAGAGAGAACACTGGAACTTCCACAGAACCTACTCAGCATTAAACTCTTaGGGAACGTATGTTTCATCG +
Preference number: 5 (lower is better)
Translates to: NPLPKWNKREHWNFHRTYSALNS*GTYVSS
Trigger: CGATGAAACATACGTTCCCAAAGAGTTTAATGCTGA...GTAGGTTCTGTGGAAGTTCCAGTGTTCTCTCTTATTCCACTTCGGTAGAGGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS-3UTR CAA 90 bp GCCCACAAGAAACTAGAAATCCTCTACCGAAGTGGAATAAGAGAGAACACTGGACTCAACAAGTGCAGTTaGTTTCTTGATTTGTCTCTC +
Preference number: 5 (lower is better)
Translates to: AHKKLEILYRSGIRENTGLNKCS*FLDLSL
Trigger: GAGAGACAAATCAAGAAACAAACTGCACTTGTTGAG...TCCAGTGTTCTCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTTCTTGTGGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS-3UTR CAA 90 bp CACAAGAAACTAGAAATCCTCTACCGAAGTGGAATAAGAGAGAACACTGGAACTCTTTCAGTTGCTCTTTaGTTGCCTTGGGCTTGTGTT +
Preference number: 5 (lower is better)
Translates to: HKKLEILYRSGIRENTGTLSVAL*LPWACV
Trigger: AACACAAGCCCAAGGCAACAAAAGAGCAACTGAAAG...AGTTCCAGTGTTCTCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTTCTTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS-3UTR CAA 90 bp TCTCATCATTTTCCACTTCGGCAATGCAGTGGGATTTTTCCAACAGAGGTTTTTCATAACAGCTTTCAGTaGCTCTTTTGTTGCCTTGGG +
Preference number: 5 (lower is better)
Translates to: SHHFPLRQCSGIFPTEVFHNSFQ*LFCCLG
Trigger: CCCAAGGCAACAAAAGAGCAACTGAAAGCTGTTATG...AAAAACCTCTGTTGGAAAAATCCCACTGCATTGCCGAAGTGGAAAATGATGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000476441.6
CDS-3UTR CAA 90 bp TTAGCCCACAAGAAACTAGAAATCCTCTACCGAAGTGGAATAAGAGAGAACACTTCCTTATCGTCAGCCTaGCAGCACTTCTCTACAAAA +
Preference number: 5 (lower is better)
Translates to: LAHKKLEILYRSGIRENTSLSSA*QHFSTK
Trigger: TTTTGTAGAGAAGTGCTGCAAGGCTGACGATAAGGA...AGTGTTCTCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTTCTTGTGGGCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS-3UTR CAA 90 bp TACCGAAGTGGAATAAGAGAGAACACTGGAACTTCCACAGAACCTACAGAATTTTCCTTATCGTCAGCCTaGCAGCACTTCTCTACAAAA +
Preference number: 5 (lower is better)
Translates to: YRSGIRENTGTSTEPTEFSLSSA*QHFSTK
Trigger: TTTTGTAGAGAAGTGCTGCAAGGCTGACGATAAGGA...AAATTCTGTAGGTTCTGTGGAAGTTCCAGTGTTCTCTCTTATTCCACTTCGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS-3UTR CAA 90 bp TTAGCCCACAAGAAACTAGAAATCCTCTACCGAAGTGGAATAAGAGAGAACACTAGCTTTATCAGCAGCTaGGCAACATTCTGTAAAAGC +
Preference number: 5 (lower is better)
Translates to: LAHKKLEILYRSGIRENTSFISS*ATFCKS
Trigger: GCTTTTACAGAATGTTGCCAAGCTGCTGATAAAGCT...AGTGTTCTCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTTCTTGTGGGCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295897.9
CDS-3UTR CAA 90 bp TTAGCCCACAAGAAACTAGAAATCCTCTACCGAAGTGGAATAAGAGAGAACACTTCTTTCTCCAAATTTTaGGAGACTGGCACACTTGAG +
Preference number: 5 (lower is better)
Translates to: LAHKKLEILYRSGIRENTSFSKF*ETGTLE
Trigger: CTCAAGTGTGCCAGTCTCCAAAAATTTGGAGAAAGA...AGTGTTCTCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTTCTTGTGGGCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295897.9
CDS-3UTR CAA 90 bp GAAACTAGAAATCCTCTACCGAAGTGGAATAAGAGAGAACACTGGAACTTCCACAGATCTGTCACTAACTaGGAAACTTCTGCAAACTCA +
Preference number: 5 (lower is better)
Translates to: ETRNPLPKWNKREHWNFHRSVTN*ETSANS
Trigger: TGAGTTTGCAGAAGTTTCCAAGTTAGTGACAGATCT...GTGGAAGTTCCAGTGTTCTCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295897.9
CDS-3UTR CAA 90 bp TATTTAATTAGCCCACAAGAAACTAGAAATCCTCTACCGAAGTGGAATAAGAGAGTGGTTTCATATGTCTaGGCAAGTCTCAGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: YLISPQETRNPLPKWNKRVVSYV*ASLSSS
Trigger: GCTGCTGCTGAGACTTGCCAAGACATATGAAACCAC...TCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTTCTTGTGGGCTAATTAAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295897.9
CDS-3UTR CAA 90 bp TACCGAAGTGGAATAAGAGAGAACACTGGAACTTCCACAGAACCTACAGAATTTCTTTTCCTAGGTTTCTaGAGACCTCTACAAGAGTTG +
Preference number: 5 (lower is better)
Translates to: YRSGIRENTGTSTEPTEFLFLGF*RPLQEL
Trigger: CAACTCTTGTAGAGGTCTCAAGAAACCTAGGAAAAG...AAATTCTGTAGGTTCTGTGGAAGTTCCAGTGTTCTCTCTTATTCCACTTCGGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS-3UTR CAA 90 bp TTCTTGATTTGTCTCTCCTTCTCAGAAAGTGTGCATATATCTGCATGGAAGGTGCTTTTCCTAGGTTTCTaGAGACCTCTACAAGAGTTG +
Preference number: 5 (lower is better)
Translates to: FLICLSFSESVHISAWKVLFLGF*RPLQEL
Trigger: CAACTCTTGTAGAGGTCTCAAGAAACCTAGGAAAAG...CACCTTCCATGCAGATATATGCACACTTTCTGAGAAGGAGAGACAAATCAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476441.6
CDS-3UTR CAA 90 bp GAAACTAGAAATCCTCTACCGAAGTGGAATAAGAGAGAACACTGGAACTTCCACTCAGCATTAAACTCTTaGGGAACGTATGTTTCATCG +
Preference number: 5 (lower is better)
Translates to: ETRNPLPKWNKREHWNFHSALNS*GTYVSS
Trigger: CGATGAAACATACGTTCCCAAAGAGTTTAATGCTGA...GTGGAAGTTCCAGTGTTCTCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS-3UTR CAA 90 bp GAAACTAGAAATCCTCTACCGAAGTGGAATAAGAGAGAACACTGGAACTTCCACAGTGCAGTTTGTTTCTaGATTTGTCTCTCCTTCTCA +
Preference number: 5 (lower is better)
Translates to: ETRNPLPKWNKREHWNFHSAVCF*ICLSFS
Trigger: TGAGAAGGAGAGACAAATCAAGAAACAAACTGCACT...GTGGAAGTTCCAGTGTTCTCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS-3UTR CAA 90 bp GAAACTAGAAATCCTCTACCGAAGTGGAATAAGAGAGAACACTGGAACTTCCACCTCAACAAGTGCAGTTaGTTTCTTGATTTGTCTCTC +
Preference number: 5 (lower is better)
Translates to: ETRNPLPKWNKREHWNFHLNKCS*FLDLSL
Trigger: GAGAGACAAATCAAGAAACAAACTGCACTTGTTGAG...GTGGAAGTTCCAGTGTTCTCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS-3UTR CAA 90 bp GCACGACAGAGTAATCAGGATGCCTTCTTGCATATTCATACAAAAACATGCCCATTTTTAGACAGGGTGTaGGCTTTACACCAACGAAAA +
Preference number: 5 (lower is better)
Translates to: ARQSNQDAFLHIHTKTCPFLDRV*ALHQRK
Trigger: TTTTCGTTGGTGTAAAGCCAACACCCTGTCTAAAAA...TGGGCATGTTTTTGTATGAATATGCAAGAAGGCATCCTGATTACTCTGTCGTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000476441.6
CDS GCA 90 bp AGCAGTCAGCCATTTCACCATAGGTTTCACGAAGAGTTGCAACTGTaGATAATTTGTCTCCAAAAAGGGTATGAAGTGATTTGTCACAAT +
Preference number: 5 (lower is better)
Translates to: SSQPFHHRFHEELQL*IICLQKGYEVICHN
Trigger: ATTGTGACAAATCACTTCATACCCTTTTTGGAGACAAATTATGCACAGTTGCAACTCTTCGTGAAACCTATGGTGAAATGGCTGACTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000295897.9
ENST00000441319.5
ENST00000509063.5
ENST00000510166.5
ENST00000514786.1
ENST00000515133.5
ENST00000621085.4
ENST00000621628.4
CDS CCA 90 bp CCTTCAGTTTACTGGAGATCGAATCTTGATTTTCACAGATATACTTaGCAAGGTCCGCCTATAAGTAAGTTGGTGGAAATTGTTCAACAC +
Preference number: 5 (lower is better)
Translates to: PSVYWRSNLDFHRYT*QGPPISKLVEIVQH
Trigger: GTGTTGAACAATTTCCACCAACTTACTTATAGGCGGACCTTGCCAAGTATATCTGTGAAAATCAAGATTCGATCTCCAGTAAACTGAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484992.1
CDS-3UTR CAA 90 bp CACAAGAAACTAGAAATCCTCTACCGAAGTGGAATAAGAGAGAACACTGGAACTAGGTTTCACGAAGAGTaGCAACTGTGCATAATTTGT +
Preference number: 5 (lower is better)
Translates to: HKKLEILYRSGIRENTGTRFHEE*QLCIIC
Trigger: ACAAATTATGCACAGTTGCAACTCTTCGTGAAACCT...AGTTCCAGTGTTCTCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTTCTTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS-3UTR CAA 90 bp TACCGAAGTGGAATAAGAGAGAACACTGGAACTTCCACAGAACCTACAGAATTTTTTGGGTTGTCATCTTaGTGTTGCAAGAAGCATTCA +
Preference number: 5 (lower is better)
Translates to: YRSGIRENTGTSTEPTEFFGLSS*CCKKHS
Trigger: TGAATGCTTCTTGCAACACAAAGATGACAACCCAAA...AAATTCTGTAGGTTCTGTGGAAGTTCCAGTGTTCTCTCTTATTCCACTTCGGTA
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS-3UTR CAA 90 bp TATTTAATTAGCCCACAAGAAACTAGAAATCCTCTACCGAAGTGGAATAAGAGAAGACCTCTACAAGAGTaGGAGTTGACACTTGGGGTA +
Preference number: 5 (lower is better)
Translates to: YLISPQETRNPLPKWNKRRPLQE*ELTLGV
Trigger: TACCCCAAGTGTCAACTCCAACTCTTGTAGAGGTCT...TCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTTCTTGTGGGCTAATTAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS-3UTR CAA 90 bp AAACTAGAAATCCTCTACCGAAGTGGAATAAGAGAGAACACTGGAACTTCCACAAGTGCAGTTTGTTTCTaGATTTGTCTCTCCTTCTCA +
Preference number: 5 (lower is better)
Translates to: KLEILYRSGIRENTGTSTSAVCF*ICLSFS
Trigger: TGAGAAGGAGAGACAAATCAAGAAACAAACTGCACT...TGTGGAAGTTCCAGTGTTCTCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS-3UTR CAA 90 bp AAACTAGAAATCCTCTACCGAAGTGGAATAAGAGAGAACACTGGAACTTCCACATTTTTAGACAGGGTGTaGGCTTTACACCAACGAAAA +
Preference number: 5 (lower is better)
Translates to: KLEILYRSGIRENTGTSTFLDRV*ALHQRK
Trigger: TTTTCGTTGGTGTAAAGCCAACACCCTGTCTAAAAA...TGTGGAAGTTCCAGTGTTCTCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS-3UTR CAA 90 bp TATTTAATTAGCCCACAAGAAACTAGAAATCCTCTACCGAAGTGGAATAAGAGATCTCAGGTTCTTGTTTaGCACAGCAGTCAGCCATTT +
Preference number: 5 (lower is better)
Translates to: YLISPQETRNPLPKWNKRSQVLV*HSSQPF
Trigger: AAATGGCTGACTGCTGTGCAAAACAAGAACCTGAGA...TCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTTCTTGTGGGCTAATTAAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS-3UTR CAA 90 bp TCCTTCTCAGAAAGTGTGCATATATCTGCATGGAAGGTGAATGTTTCAGCATTAAGATCTGTCACTAACTaGGAAACTTCTGCAAACTCA +
Preference number: 5 (lower is better)
Translates to: SFSESVHISAWKVNVSALRSVTN*ETSANS
Trigger: TGAGTTTGCAGAAGTTTCCAAGTTAGTGACAGATCT...TAATGCTGAAACATTCACCTTCCATGCAGATATATGCACACTTTCTGAGAAGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476441.6
CDS-3UTR CAA 90 bp TATTTAATTAGCCCACAAGAAACTAGAAATCCTCTACCGAAGTGGAATAAGAGACTACAAGAGTTGGAGTaGACACTTGGGGTACTTTCT +
Preference number: 5 (lower is better)
Translates to: YLISPQETRNPLPKWNKRLQELE*TLGVLS
Trigger: AGAAAGTACCCCAAGTGTCAACTCCAACTCTTGTAG...TCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTTCTTGTGGGCTAATTAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS-3UTR CAA 90 bp TATTTAATTAGCCCACAAGAAACTAGAAATCCTCTACCGAAGTGGAATAAGAGAGATTCTGTGCAGCATTaGGTGACTCTGTCACTTACT +
Preference number: 5 (lower is better)
Translates to: YLISPQETRNPLPKWNKRDSVQH*VTLSLT
Trigger: AGTAAGTGACAGAGTCACCAAATGCTGCACAGAATC...TCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTTCTTGTGGGCTAATTAAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS-3UTR CAA 90 bp TATTTAATTAGCCCACAAGAAACTAGAAATCCTCTACCGAAGTGGAATAAGAGACATAACAGCTTTCAGTaGCTCTTTTGTTGCCTTGGG +
Preference number: 5 (lower is better)
Translates to: YLISPQETRNPLPKWNKRHNSFQ*LFCCLG
Trigger: CCCAAGGCAACAAAAGAGCAACTGAAAGCTGTTATG...TCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTTCTTGTGGGCTAATTAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS-3UTR CAA 90 bp TATTTAATTAGCCCACAAGAAACTAGAAATCCTCTACCGAAGTGGAATAAGAGATTTGGGTTGTCATCTTaGTGTTGCAAGAAGCATTCA +
Preference number: 5 (lower is better)
Translates to: YLISPQETRNPLPKWNKRFGLSS*CCKKHS
Trigger: TGAATGCTTCTTGCAACACAAAGATGACAACCCAAA...TCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTTCTTGTGGGCTAATTAAATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS-3UTR CAA 90 bp TATTTAATTAGCCCACAAGAAACTAGAAATCCTCTACCGAAGTGGAATAAGAGATTTTTAGACAGGGTGTaGGCTTTACACCAACGAAAA +
Preference number: 5 (lower is better)
Translates to: YLISPQETRNPLPKWNKRFLDRV*ALHQRK
Trigger: TTTTCGTTGGTGTAAAGCCAACACCCTGTCTAAAAA...TCTCTTATTCCACTTCGGTAGAGGATTTCTAGTTTCTTGTGGGCTAATTAAATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295897.9
ENST00000621628.4
CDS CCA 72 bp CCTCACTCTTGTGTGCATCTCGACGAAACACACCCCTaGAATAAGCCGAGAATGTGCTGTTATGGCTGGCTC +
Preference number: 6 (lower is better)
Translates to: PHSCVHLDETHP*NKPRMCCYGWL
Trigger: GAGCCAGCCATAACAGCACATTCTCGGCTTATTCCAGGGGTGTGTTTCGTCGAGATGCACACAAGAGTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441319.5
CDS CAA 72 bp GGCTCCTCGGCAAAGCAGGTCTCCTTATCGTCAGCCTaGCAGCACTTCTCTACAAAAGCTGCGAAATCATCC +
Preference number: 6 (lower is better)
Translates to: GSSAKQVSLSSA*QHFSTKAAKSS
Trigger: GGATGATTTCGCAGCTTTTGTAGAGAAGTGCTGCAAGGCTGACGATAAGGAGACCTGCTTTGCCGAGGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509063.5
CDS GCA 72 bp GCTCCTCGGCAAAGCAGGTCTCCTTATCGTCAGCCTTaGAGCACTTCTCTACAAAAGCTGCGAAATCATCCA +
Preference number: 6 (lower is better)
Translates to: APRQSRSPYRQP*STSLQKLRNHP
Trigger: TGGATGATTTCGCAGCTTTTGTAGAGAAGTGCTGCAAGGCTGACGATAAGGAGACCTGCTTTGCCGAGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509063.5
CDS CAA 90 bp CTCATGGTAGGCTCCTCGGCAAAGCAGGTCTCCTTATCGTCAGCCTaGCAGCACTTCTCTACAAAAGCTGCGAAATCATCCATAACAGCT +
Preference number: 6 (lower is better)
Translates to: LMVGSSAKQVSLSSA*QHFSTKAAKSSITA
Trigger: AGCTGTTATGGATGATTTCGCAGCTTTTGTAGAGAAGTGCTGCAAGGCTGACGATAAGGAGACCTGCTTTGCCGAGGAGCCTACCATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509063.5
CDS CCA 72 bp CTGTCACTAACTTGGAAACTTCTGCAAACTCAGCTTTaGGAAATCTCTGGCTCAGGCGAGCTACTGCCAAGG +
Preference number: 6 (lower is better)
Translates to: LSLTWKLLQTQL*EISGSGELLPR
Trigger: CCTTGGCAGTAGCTCGCCTGAGCCAGAGATTTCCCAAAGCTGAGTTTGCAGAAGTTTCCAAGTTAGTGACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415165.6
CDS CCA 72 bp ATTGTCATGAAAAGCAGTGCACATCACATCAACCTCTaGTCTCACCAATCGGGGGAGGTTTGGGTTGTCATC +
Preference number: 6 (lower is better)
Translates to: IVMKSSAHHINL*SHQSGEVWVVI
Trigger: GATGACAACCCAAACCTCCCCCGATTGGTGAGACCAGAGGTTGATGTGATGTGCACTGCTTTTCATGACAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000295897.9
ENST00000441319.5
ENST00000505649.5
ENST00000509063.5
ENST00000510166.5
ENST00000514786.1
ENST00000515133.5
ENST00000621085.4
ENST00000621628.4
CDS CCA 72 bp TTGGAAACTTCTGCAAACTCAGCTTTGGGAAATCTCTaGCTCAGGCGAGCTACTGCCCATGCTTTGAAAGCT +
Preference number: 6 (lower is better)
Translates to: LETSANSALGNL*LRRATAHALKA
Trigger: AGCTTTCAAAGCATGGGCAGTAGCTCGCCTGAGCCAGAGATTTCCCAAAGCTGAGTTTGCAGAAGTTTCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000295897.9
ENST00000401494.7
ENST00000476441.6
ENST00000503124.5
ENST00000505649.5
ENST00000507673.1
ENST00000509063.5
ENST00000511370.1
CDS CAA 72 bp TCTGTCACTAACTTGGAAACTTCTGCAAACTCAGCTTaGGGAAATCTCTGGCTCAGGCGAGCTACTGCCCAT +
Preference number: 6 (lower is better)
Translates to: SVTNLETSANSA*GNLWLRRATAH
Trigger: ATGGGCAGTAGCTCGCCTGAGCCAGAGATTTCCCAAAGCTGAGTTTGCAGAAGTTTCCAAGTTAGTGACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000295897.9
ENST00000401494.7
ENST00000476441.6
ENST00000503124.5
ENST00000505649.5
ENST00000507673.1
ENST00000509063.5
ENST00000511370.1
CDS CAA 72 bp TCTGTCACTAACTTGGAAACTTCTGCAAACTCAGCTTaGGGAAATCTCTGGCTCAGGCGAGCTACTGCCAAG +
Preference number: 6 (lower is better)
Translates to: SVTNLETSANSA*GNLWLRRATAK
Trigger: CTTGGCAGTAGCTCGCCTGAGCCAGAGATTTCCCAAAGCTGAGTTTGCAGAAGTTTCCAAGTTAGTGACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415165.6
CDS CAA 90 bp CAGTGCACATCACATCAACCTCTGGTCTCACCAATCGGGGGAGGTTaGGGTTGTCATCTTTGTGTTGCAAGAAGCATTCATTTCTCTCAG +
Preference number: 6 (lower is better)
Translates to: QCTSHQPLVSPIGGG*GCHLCVARSIHFSQ
Trigger: CTGAGAGAAATGAATGCTTCTTGCAACACAAAGATGACAACCCAAACCTCCCCCGATTGGTGAGACCAGAGGTTGATGTGATGTGCACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000295897.9
ENST00000441319.5
ENST00000505649.5
ENST00000509063.5
ENST00000510166.5
ENST00000514786.1
ENST00000515133.5
ENST00000621085.4
ENST00000621628.4
CDS CAA 90 bp CACATCACATCAACCTCTGGTCTCACCAATCGGGGGAGGTTTGGGTaGTCATCTTTGTGTTGCAAGAAGCATTCATTTCTCTCAGGTTCT +
Preference number: 6 (lower is better)
Translates to: HITSTSGLTNRGRFG*SSLCCKKHSFLSGS
Trigger: AGAACCTGAGAGAAATGAATGCTTCTTGCAACACAAAGATGACAACCCAAACCTCCCCCGATTGGTGAGACCAGAGGTTGATGTGATGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000295897.9
ENST00000441319.5
ENST00000505649.5
ENST00000509063.5
ENST00000510166.5
ENST00000514786.1
ENST00000515133.5
ENST00000621085.4
ENST00000621628.4
CDS GCA 72 bp CATTTGGTGACTCTGTCACTTACTGGCGTTTTCTCATaGAACACACATAACTGGTTCAGGACCACGGATAGC +
Preference number: 6 (lower is better)
Translates to: HLVTLSLTGVFS*NTHNWFRTTDS
Trigger: GCTATCCGTGGTCCTGAACCAGTTATGTGTGTTGCATGAGAAAACGCCAGTAAGTGACAGAGTCACCAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486939.1
CDS GCA 72 bp CATTTGGTGACTCTGTCACTTACTGGCGTTTTCTCATaGAACACACATAACTGGTTCAGGACCACGGATAGG +
Preference number: 6 (lower is better)
Translates to: HLVTLSLTGVFS*NTHNWFRTTDR
Trigger: CCTATCCGTGGTCCTGAACCAGTTATGTGTGTTGCATGAGAAAACGCCAGTAAGTGACAGAGTCACCAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505649.5
CDS CCA 72 bp CACATCAACCTCTGGTCTCACCAATCGGGGGAGGTTTaGGTTGTCATCTTTGTGTTGCAAGAAGCATTCATT +
Preference number: 6 (lower is better)
Translates to: HINLWSHQSGEV*VVIFVLQEAFI
Trigger: AATGAATGCTTCTTGCAACACAAAGATGACAACCCAAACCTCCCCCGATTGGTGAGACCAGAGGTTGATGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000295897.9
ENST00000441319.5
ENST00000505649.5
ENST00000509063.5
ENST00000510166.5
ENST00000514786.1
ENST00000515133.5
ENST00000621085.4
ENST00000621628.4
CDS CCA 72 bp CTTATTCTCATGGTAGGGGCTGCTGAATTCTTCTGTTaGGCTAGGCAAGGGGACACACCAATAAATGTTGTC +
Preference number: 6 (lower is better)
Translates to: LILMVGAAEFFC*ARQGDTPINVV
Trigger: GACAACATTTATTGGTGTGTCCCCTTGCCTAGCCCAACAGAAGAATTCAGCAGCCCCTACCATGAGAATAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495173.1
CDS CCA 72 bp TTTACCCTGTCATCAGCACATTCAAGCAGATCTCCATaGCAGCATTCCGTGTGGACTTTGGTAAGATCTGTC +
Preference number: 6 (lower is better)
Translates to: FTLSSAHSSRSP*QHSVWTLVRSV
Trigger: GACAGATCTTACCAAAGTCCACACGGAATGCTGCCATGGAGATCTGCTTGAATGTGCTGATGACAGGGTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507673.1
CDS CAA 72 bp TCACATCAACCTCTGGTCTCACCAATCGGGGGAGGTTaGGGTTGTCATCTTTGTGTTGCAAGAAGCATTCAT +
Preference number: 6 (lower is better)
Translates to: SHQPLVSPIGGG*GCHLCVARSIH
Trigger: ATGAATGCTTCTTGCAACACAAAGATGACAACCCAAACCTCCCCCGATTGGTGAGACCAGAGGTTGATGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000295897.9
ENST00000441319.5
ENST00000505649.5
ENST00000509063.5
ENST00000510166.5
ENST00000514786.1
ENST00000515133.5
ENST00000621085.4
ENST00000621628.4
CDS CAA 90 bp TTGGTAAGATCTGTCACTAACTTGGAAACTTCTGCAAACTCAGCTTaGGGAAATCTCTGGCTCAGGCGAGCTACTGCCCATGCTTTGAAA +
Preference number: 6 (lower is better)
Translates to: LVRSVTNLETSANSA*GNLWLRRATAHALK
Trigger: TTTCAAAGCATGGGCAGTAGCTCGCCTGAGCCAGAGATTTCCCAAAGCTGAGTTTGCAGAAGTTTCCAAGTTAGTGACAGATCTTACCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000295897.9
ENST00000401494.7
ENST00000476441.6
ENST00000503124.5
ENST00000505649.5
ENST00000507673.1
ENST00000509063.5
ENST00000511370.1
CDS CAA 90 bp TTGGTAAGATCTGTCACTAACTTGGAAACTTCTGCAAACTCAGCTTaGGGAAATCTCTGGCTCAGGCGAGCTACTGCCAAGGCTTTGAAA +
Preference number: 6 (lower is better)
Translates to: LVRSVTNLETSANSA*GNLWLRRATAKALK
Trigger: TTTCAAAGCCTTGGCAGTAGCTCGCCTGAGCCAGAGATTTCCCAAAGCTGAGTTTGCAGAAGTTTCCAAGTTAGTGACAGATCTTACCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415165.6
CDS CCA 72 bp TTGGAAACTTCTGCAAACTCAGCTTTGGGAAATCTCTaGCTCAGGCGAGCTACTGCCAAGGCTTTGAAATTT +
Preference number: 6 (lower is better)
Translates to: LETSANSALGNL*LRRATAKALKF
Trigger: AAATTTCAAAGCCTTGGCAGTAGCTCGCCTGAGCCAGAGATTTCCCAAAGCTGAGTTTGCAGAAGTTTCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415165.6
CDS CCA 72 bp TCACTTACTGGCGTTTTCTCATGCAACACACATAACTaGTTCAGGACCACGGATAGGCATTCTGGAATTTGT +
Preference number: 6 (lower is better)
Translates to: SLTGVFSCNTHN*FRTTDRHSGIC
Trigger: ACAAATTCCAGAATGCCTATCCGTGGTCCTGAACCAGTTATGTGTGTTGCATGAGAAAACGCCAGTAAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505649.5
CDS CAA 72 bp GAGCTTTGGCAACAGGCAGGCAGCTTTATCAGCAGCTaGGCAACATTCTGTAAAAGCAGCTTTATACCTTTT +
Preference number: 6 (lower is better)
Translates to: ELWQQAGSFISS*ATFCKSSFIPF
Trigger: AAAAGGTATAAAGCTGCTTTTACAGAATGTTGCCAAGCTGCTGATAAAGCTGCCTGCCTGTTGCCAAAGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000295897.9
ENST00000401494.7
ENST00000476441.6
ENST00000503124.5
ENST00000505649.5
ENST00000509063.5
ENST00000511370.1
CDS TCA 72 bp TCACCAATGATACCAAACGCATCCATTCTACCAACTTaGGCATGCAAGCTACCAAAAAGCATATCGACGACT +
Preference number: 6 (lower is better)
Translates to: SPMIPNASILPT*ACKLPKSISTT
Trigger: AGTCGTCGATATGCTTTTTGGTAGCTTGCATGCTCAAGTTGGTAGAATGGATGCGTTTGGTATCATTGGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507673.1
CDS CAA 72 bp GATTATAAATCTTGGAGCCAGGCAACTCTGAGTACTTaGGGGCTCAGGCATACCGCTATAAGTCTCAATATT +
Preference number: 6 (lower is better)
Translates to: DYKSWSQATLST*GLRHTAISLNI
Trigger: AATATTGAGACTTATAGCGGTATGCCTGAGCCCCAAAGTACTCAGAGTTGCCTGGCTCCAAGATTTATAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508932.5
CDS TCA 72 bp TCACAGCATTCCTTCAGTTTACTGGAGATCGAATCTTaGTTTTCACAGATATACTTGGCAAGGTCCGCCTAT +
Preference number: 6 (lower is better)
Translates to: SQHSFSLLEIES*FSQIYLARSAY
Trigger: ATAGGCGGACCTTGCCAAGTATATCTGTGAAAATCAAGATTCGATCTCCAGTAAACTGAAGGAATGCTGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484992.1
CDS CAA 72 bp AGCAGTCAGCCATTTCACCATAGGTTTCACGAAGAGTaGCAACTGTGCATAATTTGTCTCCAAAAAGGGTAT +
Preference number: 6 (lower is better)
Translates to: SSQPFHHRFHEE*QLCIICLQKGY
Trigger: ATACCCTTTTTGGAGACAAATTATGCACAGTTGCAACTCTTCGTGAAACCTATGGTGAAATGGCTGACTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000295897.9
ENST00000441319.5
ENST00000509063.5
ENST00000510166.5
ENST00000514786.1
ENST00000515133.5
ENST00000621085.4
ENST00000621628.4
CDS CAA 72 bp TTCACAGCATTCCTTCAGTTTACTGGAGATCGAATCTaGATTTTCACAGATATACTTGGCAAGGTCCGCCTA +
Preference number: 6 (lower is better)
Translates to: FTAFLQFTGDRI*IFTDILGKVRL
Trigger: TAGGCGGACCTTGCCAAGTATATCTGTGAAAATCAAGATTCGATCTCCAGTAAACTGAAGGAATGCTGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484992.1
CDS CAA 90 bp GTTTTGCACAGCAGTCAGCCATTTCACCATAGGTTTCACGAAGAGTaGCAACTGTGCATAATTTGTCTCCAAAAAGGGTATGAAGTGATT +
Preference number: 6 (lower is better)
Translates to: VLHSSQPFHHRFHEE*QLCIICLQKGYEVI
Trigger: AATCACTTCATACCCTTTTTGGAGACAAATTATGCACAGTTGCAACTCTTCGTGAAACCTATGGTGAAATGGCTGACTGCTGTGCAAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000295897.9
ENST00000441319.5
ENST00000509063.5
ENST00000510166.5
ENST00000514786.1
ENST00000515133.5
ENST00000621085.4
ENST00000621628.4
CDS CCA 72 bp AAAGGAGTTCCGGGGCATAAAAGTAAGGATGTCTTCTaGCAATTTCATATAAGTATGTGCATCTCGACGAAA +
Preference number: 6 (lower is better)
Translates to: KGVPGHKSKDVF*QFHISMCISTK
Trigger: TTTCGTCGAGATGCACATACTTATATGAAATTGCCAGAAGACATCCTTACTTTTATGCCCCGGAACTCCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476441.6
CDS CAA 72 bp CACAGATATACTTGGCAAGGTCCGCCTATAAGTAAGTaGGTGGAAATTGTTCAACACGAATTGACATTGCTA +
Preference number: 6 (lower is better)
Translates to: HRYTWQGPPISK*VEIVQHELTLL
Trigger: TAGCAATGTCAATTCGTGTTGAACAATTTCCACCAACTTACTTATAGGCGGACCTTGCCAAGTATATCTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484992.1
CDS CAA 90 bp CTTGATTTTCACAGATATACTTGGCAAGGTCCGCCTATAAGTAAGTaGGTGGAAATTGTTCAACACGAATTGACATTGCTACACTTTCTC +
Preference number: 6 (lower is better)
Translates to: LDFHRYTWQGPPISK*VEIVQHELTLLHFL
Trigger: GAGAAAGTGTAGCAATGTCAATTCGTGTTGAACAATTTCCACCAACTTACTTATAGGCGGACCTTGCCAAGTATATCTGTGAAAATCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484992.1
CDS CCA 72 bp TACTGGAGATCGAATCTTGATTTTCACAGATATACTTaGCAAGGTCCGCCTATAAGTAAGTTGGTGGAAATT +
Preference number: 6 (lower is better)
Translates to: YWRSNLDFHRYT*QGPPISKLVEI
Trigger: AATTTCCACCAACTTACTTATAGGCGGACCTTGCCAAGTATATCTGTGAAAATCAAGATTCGATCTCCAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484992.1
CDS CCA 72 bp AAAGGAGTTCCGGGGCATAAAAGTAAGGATGTCTTCTaGCAATTTCATATAAGTATAAGTGATTTGTCACAA +
Preference number: 6 (lower is better)
Translates to: KGVPGHKSKDVF*QFHISISDLSQ
Trigger: TTGTGACAAATCACTTATACTTATATGAAATTGCCAGAAGACATCCTTACTTTTATGCCCCGGAACTCCTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503124.5